BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780483|ref|YP_003064896.1| putative inner membrane protein translocase component YidC [Candidatus Liberibacter asiaticus str. psy62] (581 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780483|ref|YP_003064896.1| putative inner membrane protein translocase component YidC [Candidatus Liberibacter asiaticus str. psy62] gi|254040160|gb|ACT56956.1| putative inner membrane protein translocase component YidC [Candidatus Liberibacter asiaticus str. psy62] Length = 581 Score = 1192 bits (3085), Expect = 0.0, Method: Compositional matrix adjust. Identities = 581/581 (100%), Positives = 581/581 (100%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD Sbjct: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY Sbjct: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF Sbjct: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS Sbjct: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK Sbjct: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF Sbjct: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK Sbjct: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL Sbjct: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII Sbjct: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ Sbjct: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 >gi|315122061|ref|YP_004062550.1| putative inner membrane protein translocase component YidC [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495463|gb|ADR52062.1| putative inner membrane protein translocase component YidC [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 578 Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/581 (76%), Positives = 501/581 (86%), Gaps = 3/581 (0%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME+NWNYF AIA+SV IVY WQ YV PRIE + +K T+++ + N+ V ID+ Sbjct: 1 MEKNWNYFAAIAISVAIVYVWQLVYVQPRIEAIKEGKKTPLTIEK-QSIQNT--IVPIDN 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 RAQALS SPRVE+ +PSL GSINLKGAQFDDL+L+GY +DVS NSP+V LL+P NT+NAY Sbjct: 58 RAQALSRSPRVEINSPSLAGSINLKGAQFDDLSLKGYRVDVSRNSPMVALLNPLNTENAY 117 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 FAEL+Y+ST N PN NTVWNL+SG++LTP++PIKL FK+ANNILFER ISLDE+YLF Sbjct: 118 FAELNYISTTNTTVFPNENTVWNLVSGQVLTPSSPIKLAFKSANNILFERIISLDENYLF 177 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 IVDT+TNN + I FSP G+I R+K Q +N+FGVQEGFIAVLGD+SL+E+KYSDIEKS Sbjct: 178 TIVDTITNNGTNLISFSPYGKITRYKLQKESNSFGVQEGFIAVLGDQSLIEKKYSDIEKS 237 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 S+SNFHESNSWLGISDKYWAS FIP KE SF S+F Y SDG ARYQA F NEI + PGK Sbjct: 238 SVSNFHESNSWLGISDKYWASAFIPPKEKSFQSRFDYFSDGRARYQANFKINEIILSPGK 297 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 S TTN LF GAKE P I HYEK+L IPRFEMLIDWGWFYFIAKPMF LMSYFYNLVGNF Sbjct: 298 STKTTNSLFVGAKELPIIQHYEKELEIPRFEMLIDWGWFYFIAKPMFALMSYFYNLVGNF 357 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 GIAIMLTT+FVK LFFPLAKKQYVSTANMKNIQPKID LREKFKQ+ PQVLQK M+QLYK Sbjct: 358 GIAIMLTTIFVKALFFPLAKKQYVSTANMKNIQPKIDALREKFKQASPQVLQKEMLQLYK 417 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 TH INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF+GWI+DLAA DPTNIFTLFGIL Sbjct: 418 THKINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFFGWIQDLAAPDPTNIFTLFGIL 477 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 PF LP F+HVGIWPIIMSLSMF+Q+KMSPPP DKGQA++LNWMPVVFVFALSSFPAGLII Sbjct: 478 PFQLPEFIHVGIWPIIMSLSMFLQLKMSPPPTDKGQAIVLNWMPVVFVFALSSFPAGLII 537 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 YWSWSN+ISI+QQ VIMKM+GA+I +IDRLRS F+K+ NS+ Sbjct: 538 YWSWSNIISIIQQTVIMKMYGAKIDIIDRLRSMFAKSSNSK 578 >gi|86356094|ref|YP_467986.1| putative inner membrane protein translocase component YidC [Rhizobium etli CFN 42] gi|86280196|gb|ABC89259.1| putative inner membrane transmembrane protein [Rhizobium etli CFN 42] Length = 597 Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust. Identities = 293/593 (49%), Positives = 391/593 (65%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI----------------QTVK 44 ME N NYF+AIALSV+IV WQ Y+ PRIE ++ Q Sbjct: 1 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQTQQPAAGGQAPA 60 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 Q + S A R QAL +PR+ + +L GSINL GA+ DDL L+GYH V + Sbjct: 61 QTSGAAPSGQAAATATREQALEKTPRIAIDTAALSGSINLAGARLDDLKLKGYHETVDDS 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SP +TL SP+ TK+ YF EL Y+ + +P +T+W G LT TP+ L + N Sbjct: 121 SPTITLFSPAETKDGYFTELGYIGSDTTGAVPGPSTLWTAPEGAKLTEKTPVTLSYTNDK 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F + D + N S GR+MR+ T + + + EGFI V+ Sbjct: 181 GLTFTRTISVDERYMFTVADKIENTGQAPAALSSYGRVMRYNKPTTPSVYVLHEGFIGVI 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD L+E KYS +EK ++S + WLGI+DKYWA+ +P + +++ ++F Y SDG R Sbjct: 241 GDDGLIESKYSAVEKEAVSPAKSAGGWLGITDKYWAATIVPPQSSAYEAKFSYFSDGQPR 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + ++ PG+SI N +FAGAKE P I YE +IP+F+ LIDWGWFYFI K Sbjct: 301 YQADYKNDAFSVAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPKFDRLIDWGWFYFITK 360 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +FY GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 361 PMFKLMDFFYRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFG 420 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+AM+QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD Sbjct: 421 DD-RMGLQQAMMQLYKDEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 479 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P F+H+G+WP+IM ++MF+QM+M+P P D QAMI NWMP Sbjct: 480 LSAPDPTTIVNLFGLLPFEAPTFLHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFNWMP 539 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK HG +I L D LR F + Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRHGVKIELFDNLRGLFRRK 592 >gi|150395307|ref|YP_001325774.1| putative inner membrane protein translocase component YidC [Sinorhizobium medicae WSM419] gi|166977420|sp|A6U5K9|OXAA_SINMW RecName: Full=Inner membrane protein oxaA gi|150026822|gb|ABR58939.1| 60 kDa inner membrane insertion protein [Sinorhizobium medicae WSM419] Length = 597 Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust. Identities = 294/592 (49%), Positives = 399/592 (67%), Gaps = 16/592 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN-NERKNIQTVKQPN--QVDNSYAA-- 55 ME N NYFVAIALSV+I+ AWQ FYV P++E+ K Q QP Q AA Sbjct: 2 MENNRNYFVAIALSVLILIAWQFFYVSPKMEKDRIAAEKAQQAQSQPGTQQAAPGQAAPG 61 Query: 56 ---------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + R QA+ S RV + P+L GSINL GA+FDDL L+GY V SP Sbjct: 62 QALPGGAIPSAAESRDQAIGKSARVAIDTPALSGSINLTGARFDDLKLKGYRETVDPKSP 121 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 ++TL SP+ T + YF E+ Y+ + +P TVW L G LTP+TP+ L + N I Sbjct: 122 VITLFSPAETADGYFTEIGYIGSDATGSVPGPQTVWMLSGGDKLTPSTPVTLSYTNDKGI 181 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 F RTIS+D+ Y+F++VD++ N++ + S GR+ R + + + + EGF+ V G+ Sbjct: 182 TFTRTISVDDRYMFEVVDSIKNDAAAAVSLSSYGRVTRFNKPSTPSIYVLHEGFVGVAGE 241 Query: 227 KSLVEQKYSDIE-KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 L E YSD+E + + + WLGI+DKYWA+ +P ++T F +F + +DG RY Sbjct: 242 HGLQEVGYSDVEDEEPVEPGKSTGGWLGITDKYWAATIVPPQDTPFDIRFSHFADGRPRY 301 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 Q+ + ++ +T+ PG+S N +FAGAKE P + +YE +IP F+ LIDWGWFYFI KP Sbjct: 302 QSDYKSDAVTVAPGQSAEVKNLIFAGAKEVPVVDNYELTYSIPNFDKLIDWGWFYFITKP 361 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 MF +M +F+ L GNFGIAI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF Sbjct: 362 MFKMMDFFFRLFGNFGIAILITTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGD 421 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 LQ+AM+QLYK INPLAGCWPIL+QIPVFFA+YKVI +++EMRHAPF+GWI+DL Sbjct: 422 DR-MGLQQAMMQLYKEEKINPLAGCWPILIQIPVFFALYKVIYVTIEMRHAPFFGWIQDL 480 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 +A DPT I LFG+LPF P F+H+GIWPI+M ++MF+QM+M+P P D QAM+ WMPV Sbjct: 481 SAPDPTTIINLFGLLPFEGPAFLHLGIWPIVMGVTMFLQMRMNPTPPDPTQAMLFTWMPV 540 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 VF F L+SFPAGL+IYW+W+N +SI+QQ +IMK G ++ L D L+S FSK Sbjct: 541 VFTFMLASFPAGLVIYWAWNNTLSILQQGIIMKRQGVKVELFDNLKSLFSKK 592 >gi|209547692|ref|YP_002279609.1| inner membrane protein translocase component YidC [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533448|gb|ACI53383.1| 60 kDa inner membrane insertion protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 597 Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust. Identities = 288/593 (48%), Positives = 391/593 (65%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 ME+N NYF+AIALSV+IV WQ Y+ PRIE ++ + ++ QV Sbjct: 1 MEKNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQKTEQVQQPAANGAAPA 60 Query: 52 -------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 S AV QAL+ +PRV + P+L GSINL GA+ DDL L+GYH V + Sbjct: 61 PTSGTAPSGQAVATATLEQALAKNPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDS 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SP +TL SP+ TK+ YF EL Y+ + +P ++T+W G LT TP+ L + N Sbjct: 121 SPTITLFSPAETKDGYFTELGYIGSDATGNVPGASTLWTAPEGAKLTDKTPVTLSYTNDK 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F + D V N + S GR+ R+ T + + + EGFI V+ Sbjct: 181 GLTFTRTISVDERYMFTVADKVENTGQAPVSLSSYGRVTRYNKPTTPSVYVLHEGFIGVI 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD LVE KY+ EK ++ + WLGI+DKYWA+ IP + +++ ++F + +DG R Sbjct: 241 GDDGLVETKYTAAEKEAVMPPKSTGGWLGITDKYWAATIIPPQTSAYEARFSHFADGQPR 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + T+ PG+SI N +FAGAKE P I YE +IP+F+ LIDWGWFYFI K Sbjct: 301 YQADYKDDAFTVAPGQSIELKNLVFAGAKEVPVIDGYETSYSIPKFDRLIDWGWFYFITK 360 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +FY GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 361 PMFKLMDFFYRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFA 420 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD Sbjct: 421 DD-RMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 479 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P +H+G+WP+IM ++MF+QM+M+P P D QAMI WMP Sbjct: 480 LSAPDPTTIVNLFGLLPFEAPTILHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFTWMP 539 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK G ++ L D L+ F + Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRQGVKVELFDNLKGLFRRK 592 >gi|116250222|ref|YP_766060.1| inner membrane protein translocase component YidC [Rhizobium leguminosarum bv. viciae 3841] gi|166977404|sp|Q1MM58|OXAA_RHIL3 RecName: Full=Inner membrane protein oxaA gi|115254870|emb|CAK05944.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 598 Score = 625 bits (1611), Expect = e-177, Method: Compositional matrix adjust. Identities = 289/593 (48%), Positives = 386/593 (65%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI----------------QTVK 44 ME N NYF+AIALSV+IV WQ Y+ PRIE ++ QT Sbjct: 2 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGQTPA 61 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 Q + S A QAL SPRV + P+L GSINL GA+ DDL L+GYH V + Sbjct: 62 QTSGAAPSGQAAATATLEQALQKSPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDS 121 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SPI+TL SP+ TK+ YF EL Y+ + +P +T+W G LT TP+ L + N Sbjct: 122 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGPSTLWTAPEGAKLTEKTPVTLSYTNDK 181 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F + D + N S GR+ R+ T + + + EGFI V+ Sbjct: 182 GLTFTRTISVDERYMFTVADKIENTGQAPAALSSYGRVTRYNKPTTPSVYVLHEGFIGVI 241 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD L+E KYS +EK +++ + WLGI+DKYWA+ +P + ++ + F Y +DG R Sbjct: 242 GDDGLIETKYSAVEKEAVAPAKSTGGWLGITDKYWAATIVPPQSAAYEAHFSYFADGQPR 301 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + T+ PG+SI N +FAGAKE P I YE +IP+F+ LIDWGWFYFI K Sbjct: 302 YQADYKDDAFTVAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPKFDRLIDWGWFYFITK 361 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +F+ GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 362 PMFKLMDFFFRYFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFA 421 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD Sbjct: 422 DD-RMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 480 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P +H+G+WP+IM ++MF+QM+M+P P D QAMI NWMP Sbjct: 481 LSAPDPTTIVNLFGLLPFEGPTLLHLGVWPLIMGVTMFVQMRMNPTPPDPTQAMIFNWMP 540 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S+ QQ +IMK HG ++ L D L+ F + Sbjct: 541 LVFMFMLASFPAGLVIYWAWNNTLSVAQQGLIMKRHGVKVELFDNLKGLFRRK 593 >gi|222084728|ref|YP_002543257.1| preprotein translocase 60 kD membrane subunit [Agrobacterium radiobacter K84] gi|221722176|gb|ACM25332.1| preprotein translocase 60 kD membrane subunit [Agrobacterium radiobacter K84] Length = 600 Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust. Identities = 285/596 (47%), Positives = 393/596 (65%), Gaps = 20/596 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN-------------------NERKNIQ 41 ME NYF+AIALSV+IV AWQ FY+ PR+E N Sbjct: 1 MENKRNYFIAIALSVLIVLAWQFFYMNPRLEAQRKAEQAAKLQQQTQQAQTTQNPAAGAT 60 Query: 42 TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 S L D++ A S + RV + P+L GSINL+GA+FDDL L+ YH V Sbjct: 61 VDGAAPSSGQSAPTTLTHDQSVAKSAASRVAIDTPALSGSINLEGARFDDLQLKAYHETV 120 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 +SPI+TL SP++TK+ YF EL YV + +P +TVW L SG LT +TP+ L + Sbjct: 121 DKSSPIITLFSPADTKDGYFTELGYVGSDATGAVPGPSTVWTLASGSKLTDSTPVTLSYT 180 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 N I F RT+S+DE Y+F I D + N+ + S GR+ R+ T + + + EGFI Sbjct: 181 NDKGITFTRTVSVDERYMFTITDKIANSGQAPVSLSSYGRVTRYNKPTTPSAYVLHEGFI 240 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 V+GD L+E KY+ EK +++ + WLGI+DKYWA+ +P + ++ + F + +DG Sbjct: 241 GVIGDDGLIETKYTAAEKEAVNPAKATGGWLGITDKYWAATIVPPQSGAYDAHFSHFADG 300 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 RYQA + + +T+ PG+S + +FAGAKE P I YE +IP+F+ LIDWGWFYF Sbjct: 301 QPRYQADYKQDAVTVAPGQSQELKSLVFAGAKEVPVIDRYETSYSIPKFDRLIDWGWFYF 360 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I KPMF LM +F+ GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ Sbjct: 361 ITKPMFKLMDFFFRYFGNFGVAILCTTIVVKGLFFPLASKQYASMANMKRMQPKMEELKA 420 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 KF LQ+A +QLYK INP+AGCWP+LLQIP+FF++YKVI I++EMRHAPF+GW Sbjct: 421 KFGDD-RMGLQQATMQLYKEEKINPIAGCWPVLLQIPIFFSLYKVIYITIEMRHAPFFGW 479 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I+DL+A DPT+I LFG+LPF P +H+G+WP+IM ++MF+QM+M+P P D QAMI N Sbjct: 480 IQDLSAPDPTSIVNLFGLLPFTAPTILHLGVWPLIMGITMFLQMRMNPTPPDPTQAMIFN 539 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 WMP+VF+F L+SFPAGL+IYW+W+N +S++QQ++IMK HG ++ L D ++ F + Sbjct: 540 WMPLVFMFMLASFPAGLVIYWAWNNTLSVIQQSIIMKRHGVKVELFDNMKGLFKRK 595 >gi|241202849|ref|YP_002973945.1| inner membrane protein translocase component YidC [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856739|gb|ACS54406.1| 60 kDa inner membrane insertion protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 597 Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust. Identities = 287/593 (48%), Positives = 385/593 (64%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK----------------NIQTVK 44 ME N NYF+AIALSV+IV WQ Y+ PRIE ++ QT Sbjct: 1 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKVQEAQKAQQQTEQVQQPAAGGQTPA 60 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 QP+ + A QAL+ SPRV + +L GSINL GA+ DDL L+GYH V + Sbjct: 61 QPSGAAPTSQAAATATLEQALAKSPRVVIDTAALSGSINLAGARLDDLKLKGYHETVDDS 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SPI+TL SP+ TK+ YF EL Y+ + +P +T+W G LT TP+ L + N Sbjct: 121 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGPSTLWTAPEGAKLTEKTPVTLSYTNDK 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F + D + N + GR+ R+ T + + + EGFI V+ Sbjct: 181 GLTFTRTISVDERYMFTVADKIENAGQAPASLNSYGRVTRYNKPTTPSVYVLHEGFIGVI 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD LVE KY+ EK ++ + WLGI+DKYWA+ +P + + + F + +DG R Sbjct: 241 GDDGLVETKYTAAEKEAVKPAKSTGGWLGITDKYWAATIVPPQSAPYEASFSHFADGQPR 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + T+ PG+SI N +FAGAKE P I YE +IP+F+ LIDWGWFYFI K Sbjct: 301 YQADYKEDAFTVAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPKFDRLIDWGWFYFITK 360 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +F+ GNFG+AI+ TT+ VKLLFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 361 PMFKLMDFFFRYFGNFGVAILCTTIVVKLLFFPLASKQYASMANMKRMQPKMEELKAKFA 420 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD Sbjct: 421 DD-RMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 479 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P +H+G+WP+IM ++MF+QM+M+P P D QAMI WMP Sbjct: 480 LSAPDPTTIVNLFGLLPFEAPTILHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFTWMP 539 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S+ QQ+VIMK HG ++ L D L+ F + Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVAQQSVIMKRHGVKVELFDNLKGLFRRK 592 >gi|15964197|ref|NP_384550.1| putative inner membrane protein translocase component YidC [Sinorhizobium meliloti 1021] gi|15073373|emb|CAC41881.1| Putative inner-membrane transmembrane protein [Sinorhizobium meliloti 1021] Length = 595 Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust. Identities = 291/590 (49%), Positives = 395/590 (66%), Gaps = 14/590 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE--------MNNERKNIQTVKQPNQVDNS 52 ME N NYFVAIALSV+I+ AWQ FYV P++E+ ++ Q QP + Sbjct: 2 MENNRNYFVAIALSVLILIAWQFFYVSPKMEKDRIAAEQAQQAQQTQQQPGAQPAAPGQA 61 Query: 53 YAAVLI----DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 I + R QA+ S RV + P+L GSINL GA+FDDL L+GY V SP++ Sbjct: 62 LPGGAIPSAGESRDQAIGKSARVAIDTPALSGSINLTGARFDDLKLKGYRETVDPKSPVI 121 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 TL SP+ T + YF E+ Y+ + +P T W L G LTP+TP+ L + N I F Sbjct: 122 TLFSPAETADGYFTEIGYIGSDATGSVPGPQTTWTLSGGDKLTPSTPVTLSYTNDKGITF 181 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 RTIS+D+ Y+F++VD++ N + + S GR+ R T + + + EGF+ V G+ Sbjct: 182 ARTISVDDRYMFQVVDSIKNETAAPVSLSSYGRVTRFNKPTTPSIYVLHEGFVGVAGEHG 241 Query: 229 LVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 L E YS +E + + WLGI+DKYWA+ +P + T F +F + +DG RYQ+ Sbjct: 242 LQEVGYSKVEDDEPVEPGKSTGGWLGITDKYWAATIVPPQATPFDIRFSHFADGRPRYQS 301 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + ++ +T+ PG+S+ N +FAGAKE P + +YE +IP F+ LIDWGWFYFI KPMF Sbjct: 302 DYKSDAVTVAPGQSVELKNLVFAGAKEVPVVDNYEVAYSIPNFDKLIDWGWFYFITKPMF 361 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +M +F+ L GNFGIAI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF Sbjct: 362 KMMDFFFRLFGNFGIAILITTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGDDR 421 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 LQ+AM+QLYK INPLAGCWPIL+QIPVFFA+YKVI +++EMRHAPF+GWI+DL+A Sbjct: 422 -MGLQQAMMQLYKEEKINPLAGCWPILIQIPVFFALYKVIYVTIEMRHAPFFGWIQDLSA 480 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DPT I LFG+LPF P F+H+GIWPIIM ++MF+QM+M+P P D QAM+ WMPVVF Sbjct: 481 PDPTTIINLFGLLPFEGPAFLHLGIWPIIMGVTMFLQMRMNPTPPDPTQAMLFTWMPVVF 540 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 F L+SFPAGL+IYW+W+N +SI+QQ +IMK G ++ L D L+S FSK Sbjct: 541 TFMLASFPAGLVIYWAWNNTLSILQQGIIMKRQGVKVELFDNLKSLFSKK 590 >gi|307301342|ref|ZP_07581104.1| YidC/Oxa1 family domain containing membrane protein insertase [Sinorhizobium meliloti BL225C] gi|307318012|ref|ZP_07597449.1| YidC/Oxa1 family domain containing membrane protein insertase [Sinorhizobium meliloti AK83] gi|38503127|sp|Q92SF5|OXAA_RHIME RecName: Full=Inner membrane protein oxaA gi|306896414|gb|EFN27163.1| YidC/Oxa1 family domain containing membrane protein insertase [Sinorhizobium meliloti AK83] gi|306903798|gb|EFN34385.1| YidC/Oxa1 family domain containing membrane protein insertase [Sinorhizobium meliloti BL225C] Length = 594 Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust. Identities = 291/590 (49%), Positives = 395/590 (66%), Gaps = 14/590 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE--------MNNERKNIQTVKQPNQVDNS 52 ME N NYFVAIALSV+I+ AWQ FYV P++E+ ++ Q QP + Sbjct: 1 MENNRNYFVAIALSVLILIAWQFFYVSPKMEKDRIAAEQAQQAQQTQQQPGAQPAAPGQA 60 Query: 53 YAAVLI----DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 I + R QA+ S RV + P+L GSINL GA+FDDL L+GY V SP++ Sbjct: 61 LPGGAIPSAGESRDQAIGKSARVAIDTPALSGSINLTGARFDDLKLKGYRETVDPKSPVI 120 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 TL SP+ T + YF E+ Y+ + +P T W L G LTP+TP+ L + N I F Sbjct: 121 TLFSPAETADGYFTEIGYIGSDATGSVPGPQTTWTLSGGDKLTPSTPVTLSYTNDKGITF 180 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 RTIS+D+ Y+F++VD++ N + + S GR+ R T + + + EGF+ V G+ Sbjct: 181 ARTISVDDRYMFQVVDSIKNETAAPVSLSSYGRVTRFNKPTTPSIYVLHEGFVGVAGEHG 240 Query: 229 LVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 L E YS +E + + WLGI+DKYWA+ +P + T F +F + +DG RYQ+ Sbjct: 241 LQEVGYSKVEDDEPVEPGKSTGGWLGITDKYWAATIVPPQATPFDIRFSHFADGRPRYQS 300 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + ++ +T+ PG+S+ N +FAGAKE P + +YE +IP F+ LIDWGWFYFI KPMF Sbjct: 301 DYKSDAVTVAPGQSVELKNLVFAGAKEVPVVDNYEVAYSIPNFDKLIDWGWFYFITKPMF 360 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +M +F+ L GNFGIAI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF Sbjct: 361 KMMDFFFRLFGNFGIAILITTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGDDR 420 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 LQ+AM+QLYK INPLAGCWPIL+QIPVFFA+YKVI +++EMRHAPF+GWI+DL+A Sbjct: 421 -MGLQQAMMQLYKEEKINPLAGCWPILIQIPVFFALYKVIYVTIEMRHAPFFGWIQDLSA 479 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DPT I LFG+LPF P F+H+GIWPIIM ++MF+QM+M+P P D QAM+ WMPVVF Sbjct: 480 PDPTTIINLFGLLPFEGPAFLHLGIWPIIMGVTMFLQMRMNPTPPDPTQAMLFTWMPVVF 539 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 F L+SFPAGL+IYW+W+N +SI+QQ +IMK G ++ L D L+S FSK Sbjct: 540 TFMLASFPAGLVIYWAWNNTLSILQQGIIMKRQGVKVELFDNLKSLFSKK 589 >gi|222147367|ref|YP_002548324.1| putative inner membrane protein translocase component YidC [Agrobacterium vitis S4] gi|254772742|sp|B9JZK8|OXAA_AGRVS RecName: Full=Inner membrane protein oxaA gi|221734357|gb|ACM35320.1| inner membrane insertion protein [Agrobacterium vitis S4] Length = 620 Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust. Identities = 296/615 (48%), Positives = 397/615 (64%), Gaps = 39/615 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--------KNIQTVKQPNQVDNS 52 ME N NY +AIALSV++V WQ FY+ PRIE K T P N Sbjct: 2 MENNRNYLIAIALSVMVVLGWQFFYMNPRIEAQRQAEQAQQAQQAKTPATQATPGAAVNG 61 Query: 53 -----YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 A R A++ S RVE+ +L GSINL GA+ DDL L+GYH V SPI Sbjct: 62 ALPGQTQASATTSREDAVAKSARVEINTEALSGSINLTGARLDDLRLKGYHETVDKTSPI 121 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 +TLL+P++TK+ YFAE+ ++ + +P +TVW + G+ LT TTP+ L + N + Sbjct: 122 ITLLNPADTKDGYFAEIGFIGGEKSGSVPGPSTVWTVKDGQTLTETTPVTLTYTNETGLT 181 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 F R IS+D+HY+F I DTV N I +P GR+ R+ +T+ + EGFI V+G Sbjct: 182 FSRKISVDKHYMFTIEDTVANAGGADISLAPYGRVTRYNKPAVASTYVLHEGFIGVMGSG 241 Query: 228 ----SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + VE KY+ IEK + +N + WLGI+DKYWA+ +P + ++ S+F + +DG A Sbjct: 242 DGKFASVEAKYAAIEKENETNAKATGGWLGITDKYWAATLVPPQSLAYDSRFSHFTDGQA 301 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA----------------- 326 R+QA + + +TI PG+S T LFAGAKE P + Y D + Sbjct: 302 RFQADYKNDPVTIAPGQSTTLKTLLFAGAKEVPVVDGYALDKSWFGQAFTNLFAGAKDTV 361 Query: 327 ----IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 IPRF++LIDWGWFYF+ KPMF LM +F+ VGNFG+AI+LTT+ VKLLFFPLA KQ Sbjct: 362 QQYDIPRFDLLIDWGWFYFLTKPMFKLMDFFFRQVGNFGVAILLTTIAVKLLFFPLASKQ 421 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y S ANMK +QPK++EL+ K LQ+AM++LYKT INP+AGCWP+LLQIPVFFA Sbjct: 422 YASMANMKRMQPKMEELKAKHGDDR-MALQQAMMELYKTEKINPVAGCWPLLLQIPVFFA 480 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +YKVI I++EMRHAPF+GWI DL+A DPT+ LFG+LPF P +H+GIWPIIM ++MF Sbjct: 481 LYKVIYITIEMRHAPFFGWIHDLSAPDPTSFVNLFGLLPFESPAMLHLGIWPIIMGITMF 540 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +QM+M+P P D QAM+ NWMP+VF F L SFPAGL+IYW+W+N +S++QQ++IMK HG Sbjct: 541 VQMRMNPTPPDPTQAMLFNWMPLVFTFMLGSFPAGLVIYWAWNNTLSVLQQSIIMKRHGV 600 Query: 563 EIGLIDRLRSTFSKN 577 +I L D L+ F + Sbjct: 601 KIELFDNLKGLFQRK 615 >gi|325291817|ref|YP_004277681.1| inner membrane protein translocase component YidC [Agrobacterium sp. H13-3] gi|325059670|gb|ADY63361.1| putative inner membrane protein translocase component YidC [Agrobacterium sp. H13-3] Length = 600 Score = 612 bits (1577), Expect = e-173, Method: Compositional matrix adjust. Identities = 288/595 (48%), Positives = 401/595 (67%), Gaps = 19/595 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN--NERKNIQTVKQPNQVDNSYAAVLI 58 ME+N NYF+AIALSV+IV AWQ Y+ PRIE+ E + Q Q A + Sbjct: 2 MEKNRNYFIAIALSVVIVLAWQFLYMNPRIEQQRRAEEARQAQQQTTQQQPAPGAAPGVT 61 Query: 59 DDRA---------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 D A +A++ S RV + ++ GSINL GA+FDD+ L+GYH V Sbjct: 62 ADGAPPASSTQAAATATREEAIAKSQRVAIDTNAIAGSINLTGARFDDIRLKGYHETVDD 121 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +SPI+TL SPS+TK+ YF EL YV A+ +P TVW L SG LT TTP+ L + N Sbjct: 122 SSPIITLFSPSDTKDGYFTELGYVGGADAGSVPGPATVWTLASGDKLTETTPVTLKYTNQ 181 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 N ++F RT+S+D+HY+ + D V N + F+ GR+ R+ F + EGF+ V Sbjct: 182 NGVVFSRTVSIDQHYMITVNDKVENPGQAPVSFATYGRVTRNNKPAIPPVFVIHEGFLGV 241 Query: 224 LG-DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 G D SL E+KY D+E++ ++ + WLGI+DKYWA+ +P + T F +++ ++ Sbjct: 242 SGKDGSLTEEKYKDVEETPVTIAKATGGWLGITDKYWAAAIVPPQMTPFETRYSHIKGNQ 301 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQA F ++ +T+ PG+SI + +FAGAKE P + YE + +IP+F++LIDWGWFYFI Sbjct: 302 PSYQADFKSDTMTVEPGQSIELKSLVFAGAKEVPLVDRYETEYSIPKFDLLIDWGWFYFI 361 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KPMF +M +F+ GNFG+AI+LTT+ VK LFFPLA KQY S ANMK +QPK++EL+ K Sbjct: 362 TKPMFKMMDFFFRYFGNFGVAILLTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAK 421 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +Q+AM+QLYK INP+AGCWP+LLQIPVFFA+YKVI +++EMRHAPF+GWI Sbjct: 422 HGDDR-MAMQQAMMQLYKEEKINPVAGCWPMLLQIPVFFALYKVIYVTIEMRHAPFFGWI 480 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+A DPT++F LFG+LP+ +P F+ +G+WP++M ++MF+QM+M+P P D QAMI W Sbjct: 481 HDLSAPDPTSLFNLFGLLPYDVPHFLMIGVWPLVMGITMFLQMRMNPTPPDPTQAMIFTW 540 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MP++F F L+SFPAGL+IYW+W+N +SI QQA+IMK HGA+I L D L+ F + Sbjct: 541 MPLIFTFMLASFPAGLVIYWAWNNTLSISQQALIMKRHGAKIELFDNLKGLFKRK 595 >gi|327192535|gb|EGE59487.1| inner membrane transmembrane protein [Rhizobium etli CNPAF512] Length = 597 Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust. Identities = 291/593 (49%), Positives = 392/593 (66%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI----------------QTVK 44 ME N NYF+AIALSV+IV WQ Y+ PRIE ++ T Sbjct: 1 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGATPA 60 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + S AV QAL+ +PRV + P+L GSINL GA+ DDL L+GYH V + Sbjct: 61 PTSGTAPSGQAVATATLEQALAKTPRVAIDTPALSGSINLAGARLDDLKLKGYHETVDDS 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SPI+TL SP+ TK+ YF EL Y+ + +P ++T+W G LT TP+ L + N Sbjct: 121 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGASTLWTAPEGAKLTEKTPVTLSYTNDK 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F I D V N + S GR+ R+ T + + + EGFI V+ Sbjct: 181 GLTFTRTISVDERYMFTIADKVANTGQAPVSLSSYGRVTRYNKPTTPSAYVLHEGFIGVI 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD L+E KY+ +EK ++ + WLGI+DKYWA+ +P + +++ ++F + +DG R Sbjct: 241 GDDGLIESKYTAVEKEAVMPAKSTGGWLGITDKYWAATIVPPQASAYEARFSHFADGQPR 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + TI PG+SI N +FAGAKE P I YE +IPRF+ LIDWGWFYFI K Sbjct: 301 YQADYKDDAFTIAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPRFDRLIDWGWFYFITK 360 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +F+ GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 361 PMFKLMDFFFRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFG 420 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWI+D Sbjct: 421 DD-RMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIQD 479 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P F+H+G+WP+IM ++MF+QM+M+P P D QAMI NWMP Sbjct: 480 LSAPDPTTIVNLFGLLPFTAPTFLHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFNWMP 539 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK HG +I L D L+ F + Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRHGVKIELFDNLKGLFRRK 592 >gi|227820669|ref|YP_002824639.1| putative inner membrane protein translocase component YidC [Sinorhizobium fredii NGR234] gi|254773017|sp|C3MF49|OXAA_RHISN RecName: Full=Inner membrane protein oxaA gi|227339668|gb|ACP23886.1| putative inner membrane protein translocase component YidC [Sinorhizobium fredii NGR234] Length = 592 Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust. Identities = 294/588 (50%), Positives = 397/588 (67%), Gaps = 13/588 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE--MNNERKNIQTVKQPNQVDNSY----- 53 ME N NYFVAIALSV+I+ AWQ FYV PR+++ + E+ QP Q Sbjct: 2 MENNRNYFVAIALSVLILVAWQYFYVNPRMDKDRIAAEKAQQTQQVQPQQGGQQPAPGQA 61 Query: 54 ---AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 AV + R QA++ S RV + P+L GSINL GA+FDDL L+GYH V SP++TL Sbjct: 62 LPGGAVPGESRDQAVAKSARVAIDTPALSGSINLTGARFDDLKLKGYHETVDPKSPVITL 121 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 SP+ T + YF E+ Y+ + +P TVW L G+ LTP TP+ L + N I F R Sbjct: 122 FSPAETADGYFTEIGYIGNDASGSVPGPQTVWTLSGGEKLTPATPVTLTYTNDKGITFAR 181 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 TIS+DE+Y+F++VD++ N+ + S GR+ R T + + + EGFI V G SL Sbjct: 182 TISIDENYMFQVVDSIKNDGSAPVSLSSYGRVTRFNKPTTPSIYVLHEGFIGVAGG-SLQ 240 Query: 231 EQKYSDIEKS-SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 E YS IE++ + + W GI+DKYWA+ +P +ET F +F + +DG R+Q+ + Sbjct: 241 EVGYSKIEENLPVEPGKTTGGWHGITDKYWAAAIVPPQETPFDIRFSHFTDGRPRFQSDY 300 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + +T+ PG+S N +FAGAKE + Y AIP+FE LIDWGWF+FI +PMF + Sbjct: 301 KGDAVTVAPGQSAEVKNLVFAGAKEVQVVDTYTTAYAIPKFEKLIDWGWFWFITQPMFKM 360 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M +F+ L GNFG+AI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF Sbjct: 361 MDFFFRLFGNFGVAILVTTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGDDR-M 419 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 LQ+AM+QLYK INPLAGCWPIL+QIPVFFA+YKVI I++EMRHAPF+GWI+DL+A D Sbjct: 420 GLQQAMMQLYKDEKINPLAGCWPILIQIPVFFALYKVIYITIEMRHAPFFGWIRDLSAPD 479 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT I LFG+LPF P F+H+GIWPIIM ++MF+QM+M+P P D QAM+ WMP+VF F Sbjct: 480 PTTIVNLFGLLPFDGPAFLHLGIWPIIMGVTMFLQMRMNPTPPDPTQAMLFTWMPLVFTF 539 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 L+SFPAGL+IYW+W+N +SI QQ++IMK G +I L D L+ F+K Sbjct: 540 MLASFPAGLVIYWAWNNTLSITQQSIIMKRQGVKIELFDNLKGLFTKR 587 >gi|190890108|ref|YP_001976650.1| inner membrane transmembrane protein [Rhizobium etli CIAT 652] gi|254773016|sp|B3Q040|OXAA_RHIE6 RecName: Full=Inner membrane protein oxaA gi|190695387|gb|ACE89472.1| inner membrane transmembrane protein [Rhizobium etli CIAT 652] Length = 598 Score = 608 bits (1569), Expect = e-172, Method: Compositional matrix adjust. Identities = 290/593 (48%), Positives = 394/593 (66%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP-------------- 46 ME N NYF+AIALSV+IV WQ Y+ PRIE ++ + +Q Sbjct: 2 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGATPA 61 Query: 47 --NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + S AV QAL+ +PRV + P+L GSINL GA+ DDL L+GYH V + Sbjct: 62 PASGTAPSGQAVATATLEQALAKTPRVAIDTPALSGSINLAGARLDDLKLKGYHETVDDS 121 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SPI+TL SP+ TK+ YF EL Y+ + +P ++T+W G LT TP+ L + N Sbjct: 122 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGASTLWTAPEGAKLTEKTPVTLSYTNDK 181 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F I D V N + S GR+ R+ T + + + EGFI V+ Sbjct: 182 GLTFTRTISVDERYMFTIADKVANTGQAPVSLSSYGRVTRYNKPTTPSAYVLHEGFIGVI 241 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD L+E KY+ +EK ++ + WLGI+DKYWA+ +P + +++ ++F + SDG R Sbjct: 242 GDDGLIESKYTAVEKEAVMPAKSTGGWLGITDKYWAATIVPPQASAYEARFSHFSDGQPR 301 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + T+ PG+S+ N +FAGAKE P I YE +IPRF+ LIDWGWFYFI K Sbjct: 302 YQADYKDDAFTVAPGQSVELKNLVFAGAKEVPVIDGYEASYSIPRFDRLIDWGWFYFITK 361 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +F+ GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 362 PMFKLMDFFFRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFG 421 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWI+D Sbjct: 422 DD-RMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIQD 480 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P F+H+G+WP+IM ++MF+QM+M+P P D QAMI NWMP Sbjct: 481 LSAPDPTTIVNLFGLLPFTAPTFLHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFNWMP 540 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK HG +I L D L+ F + Sbjct: 541 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRHGVKIELFDNLKGLFRRK 593 >gi|159184283|ref|NP_353415.2| putative inner membrane protein translocase component YidC [Agrobacterium tumefaciens str. C58] gi|38503098|sp|Q8UIB3|OXAA_AGRT5 RecName: Full=Inner membrane protein oxaA gi|159139609|gb|AAK86200.2| preprotein translocase 60 kD membrane subunit [Agrobacterium tumefaciens str. C58] Length = 599 Score = 605 bits (1560), Expect = e-171, Method: Compositional matrix adjust. Identities = 282/595 (47%), Positives = 399/595 (67%), Gaps = 19/595 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM---NNERKNIQTVKQPNQVDNSYAAVL 57 ME+N NYF+AIALSV+IV AWQ Y+ PRIE+ R+ Q Q + Sbjct: 1 MEKNRNYFIAIALSVVIVLAWQFLYMNPRIEQQRRAEEARQAQQQTTQQQPAPGAAPGAT 60 Query: 58 IDD--------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 ++ R +A++ + RV + ++ GSINL GA+FDD+ L+GYH V Sbjct: 61 VEGAPPASSTQAAATATREEAIARTQRVAIDTNAIAGSINLTGARFDDIRLKGYHETVDD 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +SPI+TL SP++TK+ YF EL YV+ +P TVW L SG LT TTP+ L + N+ Sbjct: 121 SSPIITLFSPADTKDGYFTELGYVAAQEVGGVPGPTTVWTLASGDKLTETTPVTLTYTNS 180 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 ++F RT+S+DEHY+ I D V N I F+ GR+ R+ F + EGF+ V Sbjct: 181 KGVVFSRTVSIDEHYMLSIADKVENPGQAAISFATYGRVTRNNKPVIPPVFVIHEGFLGV 240 Query: 224 LG-DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 G D SL E+KY D+E+ ++ + WLGI+DKYWA+ +P + T F +++ +++ Sbjct: 241 SGKDGSLTEKKYKDVEEEPVTVAKATGGWLGITDKYWAAAIVPPQTTPFETRYSHITGNQ 300 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQA F ++ +T+ G+SI + +FAGAKE P + YE + ++P+F++LIDWGWFYFI Sbjct: 301 PSYQADFKSDSMTVEAGQSIELKSLVFAGAKEVPLVDRYETEYSVPKFDLLIDWGWFYFI 360 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KPMF +M +F+ GNFG+AI+LTT+ VK LFFPLA KQY S ANMK +QPK++EL+ K Sbjct: 361 TKPMFKMMDFFFRYFGNFGVAILLTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAK 420 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +Q+AM+QLYK INP+AGCWP+LLQIPVFFA+YKVI +++EMRHAPF+GWI Sbjct: 421 HGDDR-MAMQQAMMQLYKEEKINPVAGCWPMLLQIPVFFALYKVIYVTIEMRHAPFFGWI 479 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+A DPT++F LFG+LP+ +P F+ +G+WP++M ++MF+QM+M+P P D QAMI W Sbjct: 480 HDLSAPDPTSLFNLFGLLPYDVPHFLMIGVWPLVMGITMFLQMRMNPTPPDPTQAMIFTW 539 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MP++F F L+SFPAGL+IYW+W+N +SI QQA+IMK HGA+I L D ++ F + Sbjct: 540 MPLIFTFMLASFPAGLVIYWAWNNTLSISQQALIMKRHGAKIELFDNIKGLFKRK 594 >gi|163757863|ref|ZP_02164952.1| putative inner membrane protein translocase component YidC [Hoeflea phototrophica DFL-43] gi|162285365|gb|EDQ35647.1| putative inner membrane protein translocase component YidC [Hoeflea phototrophica DFL-43] Length = 605 Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust. Identities = 278/603 (46%), Positives = 391/603 (64%), Gaps = 34/603 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT----------------VK 44 ME N NYFVAI LSV+++ WQ YV P+IE ER+ Q Sbjct: 1 METNRNYFVAILLSVLVLIGWQYLYVSPKIER---EREAAQALQAEQAATQPGATGAGTT 57 Query: 45 QPNQVDNS-------YAAVLIDD----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 P V S V+ + R AL+ S R+ + P+L GSINL GA+ DDL Sbjct: 58 TPGAVSGSAPGGETAMPGVVAPETGLSREDALAQSERIAIDTPALSGSINLTGARIDDLL 117 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L Y + SP + L SP+ + YFAE+ +++ A++ P +TVW+ G+ LT Sbjct: 118 LSEYRETIDPESPNIRLFSPAQQADGYFAEVGFIADADSGPAPGPDTVWSAAPGQTLTQG 177 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATN 212 +P+ L + N +LF R IS+D+H+LF+ DT++N+S + GR+ R +PQTA Sbjct: 178 SPVTLTYDNGAGLLFTRKISVDDHFLFQFEDTISNSSSQTASVAGYGRVTRFFRPQTA-G 236 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSI-SNFHESNSWLGISDKYWASVFIPSKETSF 271 + + EG I V+G++ L E YSD+E++ I + + W+GI+DKYWA+ +P + F Sbjct: 237 IYVLHEGLIGVIGEEGLQEIDYSDVEETPILAQPKATAGWMGITDKYWAAALVPPQGAGF 296 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++F + +DG ARYQA F + I G S+T+T +FAGAKE P I YE I F+ Sbjct: 297 DTRFAHFTDGRARYQADFRTDAQAIAAGGSVTSTTLVFAGAKEVPIIEGYESQFNILNFD 356 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 ++IDWGWFYFI KPMF ++ + + L+GNFG+AI+ TTV VKL+FFPLA K YVS ANMK Sbjct: 357 LMIDWGWFYFITKPMFWMIDFLFKLLGNFGLAILATTVIVKLIFFPLANKSYVSMANMKK 416 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QPK++EL+ K LQ+ M++LYK INP+AGCWP+LLQIPVFFA+YKV+ +++ Sbjct: 417 VQPKLEELKAKHGDDR-MALQQGMMELYKKEKINPVAGCWPVLLQIPVFFALYKVLYVTI 475 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 EMRHAPF+GWI+DL+A DPT++F LFG+LP+ +PGF+ +G+WP+IM ++MF+QM+M+P P Sbjct: 476 EMRHAPFFGWIQDLSAPDPTSLFNLFGLLPYDVPGFLLIGVWPLIMGITMFLQMRMNPTP 535 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D QAMI WMPVVF F L++FPAGL+IYW+W+N +SI+QQ IMK GA+I L D L Sbjct: 536 PDPTQAMIFTWMPVVFTFMLATFPAGLVIYWAWNNTLSILQQGFIMKRQGAKIELWDNLM 595 Query: 572 STF 574 + F Sbjct: 596 ALF 598 >gi|153008692|ref|YP_001369907.1| putative inner membrane protein translocase component YidC [Ochrobactrum anthropi ATCC 49188] gi|151560580|gb|ABS14078.1| 60 kDa inner membrane insertion protein [Ochrobactrum anthropi ATCC 49188] Length = 607 Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust. Identities = 275/602 (45%), Positives = 384/602 (63%), Gaps = 26/602 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK-----------------NIQTV 43 ME N N+F+ IALS++++ WQ FY+ P+ E + + + T Sbjct: 1 MENNRNFFITIALSILVLTLWQVFYLGPKTEAQREQARIEEQQQQKQQATQQQAQSGDTP 60 Query: 44 KQPNQVDN------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + P N AA R A++ + RVE+ PSL GSINL GA+ DDL L+ Y Sbjct: 61 QMPATSGNIPGHSDVAAAGGTLTREAAVAQTQRVEIDTPSLRGSINLTGARLDDLFLKRY 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 H V NSP + LL+PS K YF EL + +P NTVW + LTP+TP+ Sbjct: 121 HETVDDNSPQIELLAPSALKQGYFVELGFTGNDTTGPVPGPNTVWTVEGNNKLTPSTPVT 180 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGV 216 L + N NI F+R IS+D+ Y+F + DT+TNN+ I + GR+ R ++P+ A+ T+ + Sbjct: 181 LTYTNEKNITFKRVISVDDAYMFAVEDTITNNTGAPISLASYGRVTRFNQPEHASATYVL 240 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQF 275 EG I V+G L E KYS +E +F + S WLGI+DKYWA+ +P ++ F +F Sbjct: 241 HEGLIGVMGQDGLQEIKYSKVEDDKDISFKDVSGGWLGITDKYWAATLVPPQDEKFTGRF 300 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + ++ RYQ F +TI PG++ T N +FAGAK I YE+ L I +FE+LID Sbjct: 301 SHFTNDRPRYQTDFLGAPMTIAPGQAQTLKNHVFAGAKVVSNIKAYEEKLGIKQFELLID 360 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK +QPK Sbjct: 361 WGWFYFITKPMFYLIDWIYKFSGNFGVAILVVTVLLKGLFFPLANKSYKSMARMKLVQPK 420 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + E+REK+ + Q+ M++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++EMRH Sbjct: 421 LTEIREKYADDKMKQ-QQEMMRLYKEEKINPLAGCWPVLVQIPVFFALYKVLYVTIEMRH 479 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 APF+GWI+DLAA DPT++F LFG+LPF +P F+ +G+WP++M ++MF+QM+M+P P D Sbjct: 480 APFFGWIQDLAAPDPTSLFNLFGLLPFGVPHFLMIGVWPLLMGITMFLQMRMNPTPPDPT 539 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 QA I WMPV+F F L+SFPAGL+IYW+W+N++SI QQ +IMK G +I L D L+ F Sbjct: 540 QAAIFTWMPVIFTFMLASFPAGLVIYWAWNNLLSITQQGIIMKRQGVKIELFDNLKGLFK 599 Query: 576 KN 577 + Sbjct: 600 RK 601 >gi|13474029|ref|NP_105597.1| putative inner membrane protein translocase component YidC [Mesorhizobium loti MAFF303099] gi|38503148|sp|Q98D88|OXAA_RHILO RecName: Full=Inner membrane protein oxaA gi|14024781|dbj|BAB51383.1| mlr4812 [Mesorhizobium loti MAFF303099] Length = 603 Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust. Identities = 273/599 (45%), Positives = 379/599 (63%), Gaps = 23/599 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----ERKNIQTVKQPNQVDNSYAA- 55 ME N N+F+ IALSV+I+ WQ FYV PR E E++ ++ K+ + N A Sbjct: 1 MENNRNFFITIALSVLILAVWQYFYVLPRSEAQREAARVEQQRVEEQKKAAEAANPGAGT 60 Query: 56 ----------------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 V + R QAL+ S RV++ PSL GSINL GA+ DDL L+ Y Sbjct: 61 PAPAPGTIPNAPGGDTVTVAGRDQALAASKRVKIDTPSLEGSINLTGARLDDLKLKHYTE 120 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 V NSP + LL+P YFAE+ +V +P + TVWN+ L+P+TP+ L Sbjct: 121 TVDKNSPEIELLNPQALPTGYFAEIGFVGNDKTGAVPGAETVWNVDGNPTLSPSTPVTLT 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N + F+RT S+D +Y+F + DTV N+ + GR+ R+ +T+ + EG Sbjct: 181 YTNDKGLTFKRTFSVDANYMFTVSDTVQNSGSSAVSLFNYGRVTRYDKPAVASTYVLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEKS-SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 I G + L E KY+ IEK ++ WLGI+DKYWA +P+++ F ++ + Sbjct: 241 LIGFTGTEGLQEHKYASIEKDKQYQPGKATDGWLGITDKYWAVTLVPTEKQPFQPRYAFF 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 DG RYQ+ F + I + G+S T +FAGAKE I+ Y +D I RF++LIDWGW Sbjct: 301 EDGRHRYQSDFLTDAINVEAGQSATVETEVFAGAKEVAKINAYAEDRHIKRFDLLIDWGW 360 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+FI KPMF L+ Y +GNFG+AI+ TTV VK LFFPLA K Y S ANMK +QPK+ E Sbjct: 361 FHFITKPMFWLIDTLYKFLGNFGLAILATTVIVKALFFPLANKSYASMANMKKVQPKMLE 420 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+ + Q+AM++LYKT INPLAGCWP+ LQIPVFF++YKV+ I++EMRHAPF Sbjct: 421 IREKYADDKMK-QQQAMMELYKTEKINPLAGCWPVALQIPVFFSLYKVLYITIEMRHAPF 479 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI+DLAA DPT++F LFG++P LP + +G+WP+IM ++MF+QM+M+P P D QA Sbjct: 480 FGWIQDLAAPDPTSLFNLFGLIPVTLPHMLMIGVWPLIMGVTMFLQMRMNPTPPDPTQAA 539 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 I WMPV+F F ++ FPAGL+IYW+W+N++SI+QQ VIMK GA+I L D L + F K Sbjct: 540 IFTWMPVIFTFMMAGFPAGLVIYWAWNNMLSILQQGVIMKRQGAKIELWDNLMALFKKK 598 >gi|260461161|ref|ZP_05809410.1| 60 kDa inner membrane insertion protein [Mesorhizobium opportunistum WSM2075] gi|259033195|gb|EEW34457.1| 60 kDa inner membrane insertion protein [Mesorhizobium opportunistum WSM2075] Length = 603 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 272/598 (45%), Positives = 381/598 (63%), Gaps = 23/598 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----ERKNIQTVKQPNQVDNSYA-- 54 ME N N+F+ IALSV+I+ WQ FY+ PR+E+ E++ ++ K+ + N A Sbjct: 1 MENNRNFFITIALSVLILTLWQVFYMNPRVEQQREAAKIEQQRVEEQKKAAEATNPGAAT 60 Query: 55 ---------------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 AV R QAL+ S RV++ PSL GSINL GA+ DDL L+ Y Sbjct: 61 PAPAPGTIPNAPGGDAVTAAGRDQALAASKRVKIDTPSLEGSINLTGARLDDLKLKHYTE 120 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 V NSP + LL+P YFAE+ +V +P S+TVW++ L+P+TP+ L Sbjct: 121 TVDKNSPEIELLNPQALPTGYFAEIGFVGNDKTGAVPGSDTVWSVEGNPTLSPSTPVTLT 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N + F+R S+D +Y+F + DTV N+ + GR+ R+ +T+ + EG Sbjct: 181 YTNDKGLTFKRVFSVDANYMFTVTDTVQNSGASAVSLFNYGRVTRYDKPAVASTYVLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIE-KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 I V G + L E KY+ IE + ++ ++ WLGI+DKYWA +P+++ F ++ + Sbjct: 241 LIGVTGTEGLAEYKYAKIESEKQVTPGKSTDGWLGITDKYWAVTLVPTEKQPFQPRYAFF 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 DG RYQ+ F + I + G+S T +FAGAKE I+ YE D I +F ++IDWGW Sbjct: 301 EDGRHRYQSDFLTDAINVDAGQSATVETEIFAGAKEVAKINAYEADRHIRQFNLVIDWGW 360 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FYFI KPMF L+ Y GNFG+AI+ TTV VK LFFPLA K Y S ANMK +QPK+ E Sbjct: 361 FYFITKPMFWLIDTLYKFFGNFGLAILATTVIVKALFFPLANKSYASMANMKKVQPKMLE 420 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+ + Q+AM++LYKT INPLAGCWP+ LQIPVFF++YKV+ I++EMRHAPF Sbjct: 421 IREKYADDKMK-QQQAMMELYKTEKINPLAGCWPVALQIPVFFSLYKVLYITIEMRHAPF 479 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI+DLAA DPT+IF LFG++P LP + +G+WP+IM ++MF+QM+M+P P D QA Sbjct: 480 FGWIQDLAAPDPTSIFNLFGLVPVTLPHMLMIGVWPLIMGVTMFLQMRMNPTPPDPTQAA 539 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 I WMPV+F F ++ FPAGL+IYW+W+N +SI+QQ +IMK GA+I L D L + F K Sbjct: 540 IFTWMPVIFTFMMAGFPAGLVIYWAWNNTLSILQQGLIMKRQGAKIELWDNLVALFRK 597 >gi|239832645|ref|ZP_04680974.1| Inner membrane protein oxaA [Ochrobactrum intermedium LMG 3301] gi|239824912|gb|EEQ96480.1| Inner membrane protein oxaA [Ochrobactrum intermedium LMG 3301] Length = 624 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 275/604 (45%), Positives = 386/604 (63%), Gaps = 29/604 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK--------------------NI 40 ME N N+F+ IALS++++ WQ FY+ P+ E + + N Sbjct: 15 MENNRNFFITIALSILVLTLWQVFYLGPKSEAQREQARIEEQQQQKQQATQQQAQGSQNG 74 Query: 41 QTVKQPNQVDN--SYAAVLIDD----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 T + P N ++ V R A++ + R+E+ PSL GSINL GA+ DD+ L Sbjct: 75 DTPQMPAASGNVPGHSDVAAGGGTLTREAAVAQTQRIEIDTPSLRGSINLTGARLDDIFL 134 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH V +NSP + LL+PS + YF EL + +P NTVW + LT T Sbjct: 135 KNYHETVDNNSPNIELLAPSPLQQGYFVELGFTGNETTGPVPGPNTVWTVEGNNRLTQTA 194 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNT 213 P+ L + N NI F+R IS+DE Y+F + DT+ NNS I + GR+ R ++P+ A+ T Sbjct: 195 PVTLTYTNEKNITFKRIISVDESYMFSVEDTIVNNSGAPISLASYGRVTRFNQPEHASAT 254 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KYS IE + +F + WLGI+DKYWA+ IP ++ F Sbjct: 255 YVLHEGLIGVMGQDGLQEIKYSKIEDNKDISFKDVQGGWLGITDKYWAATLIPPQDEKFT 314 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQA F +TI PG++ T N +FAGAK I +YE+ L I +FE+ Sbjct: 315 GRFSHFTNDRPRYQADFLGAPMTIAPGQTQTVKNHVFAGAKVVSLIKNYEETLGIKQFEL 374 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 375 LIDWGWFYFITKPMFYLIDWIYKFSGNFGVAILVVTVLLKGLFFPLANKSYKSMARMKLV 434 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ + Q+ M++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 435 QPKLTEIREKYADDKMR-QQQEMMKLYKEEKINPLAGCWPVLVQIPVFFALYKVLYVTIE 493 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT++F LFG+LPF +P F+ +G+WP++M ++MF+QM+M+P P Sbjct: 494 MRHAPFFGWIQDLAAPDPTSLFNLFGLLPFAVPHFLMIGVWPLLMGITMFLQMRMNPTPP 553 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMPV+F F L+SFPAGL+IYW+W+N++SI QQ +IMK G +I L D L+S Sbjct: 554 DPTQAAIFTWMPVIFTFMLASFPAGLVIYWAWNNLLSITQQGIIMKRQGVKIELFDNLKS 613 Query: 573 TFSK 576 F + Sbjct: 614 LFKR 617 >gi|294853976|ref|ZP_06794648.1| preprotein translocase YidC subunit [Brucella sp. NVSL 07-0026] gi|294819631|gb|EFG36631.1| preprotein translocase YidC subunit [Brucella sp. NVSL 07-0026] Length = 610 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 274/606 (45%), Positives = 387/606 (63%), Gaps = 33/606 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------- 45 ME N+F+ IALS++I+ WQ FY+ P+ E E+ I+ ++ Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEA-QREQARIEEQQRQAQQAAQNRQASSST 59 Query: 46 -------------PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 P Q D A + R A++ SPR+E+ PSL GSINL GA+ DDL Sbjct: 60 GDTPQMPANPDSIPGQGDTKAAGAPLT-RDAAIAQSPRIEIDTPSLRGSINLTGARLDDL 118 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L+ YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP Sbjct: 119 YLKKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTP 178 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTAT 211 +TP+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ Sbjct: 179 STPVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHAS 238 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETS 270 T+ + EG I V+G L E KYS IE + +F + W+GI+DKYWA+ IP ++ Sbjct: 239 ATYVLHEGLIGVMGQDGLQEIKYSKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEK 298 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 F +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F Sbjct: 299 FTGRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQF 358 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK Sbjct: 359 DLLIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMK 418 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ ++ Sbjct: 419 LMQPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVT 477 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P Sbjct: 478 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPT 537 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L Sbjct: 538 PPDPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNL 597 Query: 571 RSTFSK 576 + F + Sbjct: 598 KGLFRR 603 >gi|306846225|ref|ZP_07478787.1| inner membrane protein translocase component YidC [Brucella sp. BO1] gi|306273476|gb|EFM55337.1| inner membrane protein translocase component YidC [Brucella sp. BO1] Length = 610 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 273/607 (44%), Positives = 388/607 (63%), Gaps = 33/607 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------- 45 ME N+F+ IALS++I+ WQ FY+ P+ E E+ I+ ++ Sbjct: 1 MENKRNFFITIALSILILTLWQVFYLGPKTEA-QREQARIEEQQRQAQQAAQNRQASSST 59 Query: 46 -------------PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 P Q D A + R A++ SPR+E+ PSL GSINL GA+ DDL Sbjct: 60 GDTPQMPANPDSIPGQGDTKAAGAPLT-RDAAIAQSPRIEIDTPSLRGSINLTGARLDDL 118 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L+ YH VS SP + LL+PS+ K YF EL + +P NTVW + K LTP Sbjct: 119 YLKKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGTVPGPNTVWVVEGNKKLTP 178 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTAT 211 +TP+ L + N N+ F+R IS+D+ Y+F + DT+ N+ + + GR+ R ++P+ A+ Sbjct: 179 STPVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINDGGSTVSLASYGRVTRFNQPEHAS 238 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETS 270 T+ + EG I V+G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ Sbjct: 239 ATYVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEK 298 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 F +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F Sbjct: 299 FTGRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQF 358 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK Sbjct: 359 DLLIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMK 418 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ ++ Sbjct: 419 LMQPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVT 477 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P Sbjct: 478 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPT 537 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L Sbjct: 538 PPDPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNL 597 Query: 571 RSTFSKN 577 + F + Sbjct: 598 KGLFRRK 604 >gi|254712779|ref|ZP_05174590.1| putative inner membrane protein translocase component YidC [Brucella ceti M644/93/1] gi|254715848|ref|ZP_05177659.1| putative inner membrane protein translocase component YidC [Brucella ceti M13/05/1] gi|261217609|ref|ZP_05931890.1| inner membrane protein oxaA [Brucella ceti M13/05/1] gi|261320486|ref|ZP_05959683.1| inner membrane protein oxaA [Brucella ceti M644/93/1] gi|260922698|gb|EEX89266.1| inner membrane protein oxaA [Brucella ceti M13/05/1] gi|261293176|gb|EEX96672.1| inner membrane protein oxaA [Brucella ceti M644/93/1] Length = 609 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 273/605 (45%), Positives = 387/605 (63%), Gaps = 32/605 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------- 45 ME N+F+ IALS++I+ WQ FY+ P+ E E+ I+ ++ Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEA-QREQARIEEQQRQAQQAAQNRQASSTG 59 Query: 46 ------------PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 P Q D A + R A++ SPR+E+ PSL GSINL GA+ DDL Sbjct: 60 DTPQMPANPDSIPGQGDTKAAGAPLT-RDAAIAQSPRIEIDTPSLRGSINLTGARLDDLY 118 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+ Sbjct: 119 LKKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPS 178 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATN 212 TP+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ Sbjct: 179 TPVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASA 238 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSF 271 T+ + EG I V+G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ F Sbjct: 239 TYVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKF 298 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F+ Sbjct: 299 TGRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFD 358 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK Sbjct: 359 LLIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKL 418 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++ Sbjct: 419 MQPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTI 477 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 478 EMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTP 537 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 538 PDPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLK 597 Query: 572 STFSK 576 F + Sbjct: 598 GLFRR 602 >gi|225686778|ref|YP_002734750.1| putative inner membrane protein translocase component YidC [Brucella melitensis ATCC 23457] gi|256262088|ref|ZP_05464620.1| inner membrane protein [Brucella melitensis bv. 2 str. 63/9] gi|225642883|gb|ACO02796.1| Inner membrane protein oxaA [Brucella melitensis ATCC 23457] gi|263091777|gb|EEZ16108.1| inner membrane protein [Brucella melitensis bv. 2 str. 63/9] gi|326411186|gb|ADZ68250.1| putative inner membrane protein translocase component YidC [Brucella melitensis M28] gi|326554477|gb|ADZ89116.1| putative inner membrane protein translocase component YidC [Brucella melitensis M5-90] Length = 610 Score = 565 bits (1455), Expect = e-159, Method: Compositional matrix adjust. Identities = 273/606 (45%), Positives = 387/606 (63%), Gaps = 33/606 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------- 45 ME N+F+ IALS++I+ WQ FY+ P+ E E+ I+ ++ Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEA-QREQARIEEQQRQAQQAAQNRQASSST 59 Query: 46 -------------PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 P Q D A + R A++ SPR+E+ PSL GSINL GA+ DDL Sbjct: 60 GDTPQMPANPDSIPGQGDTKAAGAPLT-RDAAIAQSPRIEIDTPSLRGSINLTGARLDDL 118 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L+ YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP Sbjct: 119 YLKKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTP 178 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTAT 211 +TP+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ Sbjct: 179 STPVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHAS 238 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETS 270 T+ + EG I V+G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ Sbjct: 239 ATYVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEK 298 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 F +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F Sbjct: 299 FTGRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQF 358 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK Sbjct: 359 DLLIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMK 418 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ ++ Sbjct: 419 LMQPKMTEIREKYADDKMK-QQQAMMELYKRERINPLAGCWPVLVQIPVFFALYKVLYVT 477 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P Sbjct: 478 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPT 537 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L Sbjct: 538 PPDPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNL 597 Query: 571 RSTFSK 576 + F + Sbjct: 598 KGLFRR 603 >gi|62317852|ref|YP_223705.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 1 str. 9-941] gi|83269831|ref|YP_419122.1| putative inner membrane protein translocase component YidC [Brucella melitensis biovar Abortus 2308] gi|163845137|ref|YP_001622792.1| putative inner membrane protein translocase component YidC [Brucella suis ATCC 23445] gi|189023102|ref|YP_001932843.1| putative inner membrane protein translocase component YidC [Brucella abortus S19] gi|225629472|ref|ZP_03787505.1| Inner membrane protein oxaA [Brucella ceti str. Cudo] gi|237817392|ref|ZP_04596384.1| Inner membrane protein oxaA [Brucella abortus str. 2308 A] gi|254690662|ref|ZP_05153916.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 6 str. 870] gi|254696033|ref|ZP_05157861.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 3 str. Tulya] gi|254699142|ref|ZP_05160970.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 2 str. 86/8/59] gi|254700218|ref|ZP_05162046.1| putative inner membrane protein translocase component YidC [Brucella suis bv. 5 str. 513] gi|254705520|ref|ZP_05167348.1| putative inner membrane protein translocase component YidC [Brucella pinnipedialis M163/99/10] gi|254710751|ref|ZP_05172562.1| putative inner membrane protein translocase component YidC [Brucella pinnipedialis B2/94] gi|254732586|ref|ZP_05191164.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 4 str. 292] gi|256015782|ref|YP_003105791.1| putative inner membrane protein translocase component YidC [Brucella microti CCM 4915] gi|256029134|ref|ZP_05442748.1| putative inner membrane protein translocase component YidC [Brucella pinnipedialis M292/94/1] gi|256058817|ref|ZP_05449033.1| putative inner membrane protein translocase component YidC [Brucella neotomae 5K33] gi|256111044|ref|ZP_05452106.1| putative inner membrane protein translocase component YidC [Brucella melitensis bv. 3 str. Ether] gi|256157326|ref|ZP_05455244.1| putative inner membrane protein translocase component YidC [Brucella ceti M490/95/1] gi|256253696|ref|ZP_05459232.1| putative inner membrane protein translocase component YidC [Brucella ceti B1/94] gi|256255844|ref|ZP_05461380.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 9 str. C68] gi|260167774|ref|ZP_05754585.1| putative inner membrane protein translocase component YidC [Brucella sp. F5/99] gi|260545087|ref|ZP_05820908.1| inner membrane protein [Brucella abortus NCTC 8038] gi|260756233|ref|ZP_05868581.1| inner membrane protein oxaA [Brucella abortus bv. 6 str. 870] gi|260760398|ref|ZP_05872746.1| inner membrane protein oxaA [Brucella abortus bv. 4 str. 292] gi|260763638|ref|ZP_05875970.1| inner membrane protein oxaA [Brucella abortus bv. 2 str. 86/8/59] gi|260882057|ref|ZP_05893671.1| inner membrane protein oxaA [Brucella abortus bv. 9 str. C68] gi|261216465|ref|ZP_05930746.1| inner membrane protein oxaA [Brucella abortus bv. 3 str. Tulya] gi|261220833|ref|ZP_05935114.1| inner membrane protein oxaA [Brucella ceti B1/94] gi|261312924|ref|ZP_05952121.1| inner membrane protein oxaA [Brucella pinnipedialis M163/99/10] gi|261318319|ref|ZP_05957516.1| inner membrane protein oxaA [Brucella pinnipedialis B2/94] gi|261322754|ref|ZP_05961951.1| inner membrane protein oxaA [Brucella neotomae 5K33] gi|261750713|ref|ZP_05994422.1| inner membrane protein oxaA [Brucella suis bv. 5 str. 513] gi|261757211|ref|ZP_06000920.1| inner membrane protein [Brucella sp. F5/99] gi|265986117|ref|ZP_06098674.1| inner membrane protein oxaA [Brucella pinnipedialis M292/94/1] gi|265992579|ref|ZP_06105136.1| inner membrane protein oxaA [Brucella melitensis bv. 3 str. Ether] gi|265995811|ref|ZP_06108368.1| inner membrane protein oxaA [Brucella ceti M490/95/1] gi|297249212|ref|ZP_06932913.1| preprotein translocase YidC subunit [Brucella abortus bv. 5 str. B3196] gi|62198045|gb|AAX76344.1| inner-membrane protein, 60 kDa [Brucella abortus bv. 1 str. 9-941] gi|82940105|emb|CAJ13152.1| 60 kDa inner membrane protein [Brucella melitensis biovar Abortus 2308] gi|163675860|gb|ABY39970.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|189021676|gb|ACD74397.1| 60 kDa inner membrane protein [Brucella abortus S19] gi|225615968|gb|EEH13017.1| Inner membrane protein oxaA [Brucella ceti str. Cudo] gi|237788205|gb|EEP62421.1| Inner membrane protein oxaA [Brucella abortus str. 2308 A] gi|255998442|gb|ACU50129.1| putative inner membrane protein translocase component YidC [Brucella microti CCM 4915] gi|260098358|gb|EEW82232.1| inner membrane protein [Brucella abortus NCTC 8038] gi|260670716|gb|EEX57656.1| inner membrane protein oxaA [Brucella abortus bv. 4 str. 292] gi|260674059|gb|EEX60880.1| inner membrane protein oxaA [Brucella abortus bv. 2 str. 86/8/59] gi|260676341|gb|EEX63162.1| inner membrane protein oxaA [Brucella abortus bv. 6 str. 870] gi|260871585|gb|EEX78654.1| inner membrane protein oxaA [Brucella abortus bv. 9 str. C68] gi|260918072|gb|EEX84933.1| inner membrane protein oxaA [Brucella abortus bv. 3 str. Tulya] gi|260919417|gb|EEX86070.1| inner membrane protein oxaA [Brucella ceti B1/94] gi|261297542|gb|EEY01039.1| inner membrane protein oxaA [Brucella pinnipedialis B2/94] gi|261298734|gb|EEY02231.1| inner membrane protein oxaA [Brucella neotomae 5K33] gi|261301950|gb|EEY05447.1| inner membrane protein oxaA [Brucella pinnipedialis M163/99/10] gi|261737195|gb|EEY25191.1| inner membrane protein [Brucella sp. F5/99] gi|261740466|gb|EEY28392.1| inner membrane protein oxaA [Brucella suis bv. 5 str. 513] gi|262550108|gb|EEZ06269.1| inner membrane protein oxaA [Brucella ceti M490/95/1] gi|262763449|gb|EEZ09481.1| inner membrane protein oxaA [Brucella melitensis bv. 3 str. Ether] gi|264658314|gb|EEZ28575.1| inner membrane protein oxaA [Brucella pinnipedialis M292/94/1] gi|297173081|gb|EFH32445.1| preprotein translocase YidC subunit [Brucella abortus bv. 5 str. B3196] Length = 610 Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust. Identities = 273/606 (45%), Positives = 387/606 (63%), Gaps = 33/606 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------- 45 ME N+F+ IALS++I+ WQ FY+ P+ E E+ I+ ++ Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEA-QREQARIEEQQRQAQQAAQNRQASSST 59 Query: 46 -------------PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 P Q D A + R A++ SPR+E+ PSL GSINL GA+ DDL Sbjct: 60 GDTPQMPANPDSIPGQGDTKAAGAPLT-RDAAIAQSPRIEIDTPSLRGSINLTGARLDDL 118 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L+ YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP Sbjct: 119 YLKKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTP 178 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTAT 211 +TP+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ Sbjct: 179 STPVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHAS 238 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETS 270 T+ + EG I V+G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ Sbjct: 239 ATYVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEK 298 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 F +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F Sbjct: 299 FTGRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQF 358 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK Sbjct: 359 DLLIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMK 418 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ ++ Sbjct: 419 LMQPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVT 477 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P Sbjct: 478 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPT 537 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L Sbjct: 538 PPDPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNL 597 Query: 571 RSTFSK 576 + F + Sbjct: 598 KGLFRR 603 >gi|161621071|ref|YP_001594957.1| putative inner membrane protein translocase component YidC [Brucella canis ATCC 23365] gi|254703339|ref|ZP_05165167.1| putative inner membrane protein translocase component YidC [Brucella suis bv. 3 str. 686] gi|260567731|ref|ZP_05838200.1| inner membrane protein oxaA [Brucella suis bv. 4 str. 40] gi|261753969|ref|ZP_05997678.1| inner membrane protein oxaA [Brucella suis bv. 3 str. 686] gi|161337882|gb|ABX64186.1| Inner membrane protein oxaA [Brucella canis ATCC 23365] gi|260154396|gb|EEW89477.1| inner membrane protein oxaA [Brucella suis bv. 4 str. 40] gi|261743722|gb|EEY31648.1| inner membrane protein oxaA [Brucella suis bv. 3 str. 686] Length = 610 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 272/606 (44%), Positives = 388/606 (64%), Gaps = 33/606 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------- 45 ME N+F+ IALS++I+ WQ FY+ P+ E + E+ I+ ++ Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTE-VQREQARIEEQQRQAQQAAQNRQASSST 59 Query: 46 -------------PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 P Q D A + R A++ SPR+E+ PSL GSINL GA+ DDL Sbjct: 60 GDTPQMPANPDSIPGQGDTKAAGAPLT-RDAAIAQSPRIEIDTPSLRGSINLTGARLDDL 118 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L+ YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP Sbjct: 119 YLKKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTP 178 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTAT 211 +TP+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ Sbjct: 179 STPVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHAS 238 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETS 270 T+ + EG I V+G L E KY+ I+ + +F + W+GI+DKYWA+ IP ++ Sbjct: 239 ATYVLHEGLIGVMGQDGLQEIKYAKIKDNKDISFKDVIGGWVGITDKYWAATLIPPQDEK 298 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 F +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F Sbjct: 299 FTGRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQF 358 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK Sbjct: 359 DLLIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMK 418 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ ++ Sbjct: 419 LMQPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVT 477 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P Sbjct: 478 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPT 537 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L Sbjct: 538 PPDPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNL 597 Query: 571 RSTFSK 576 + F + Sbjct: 598 KGLFRR 603 >gi|254720149|ref|ZP_05181960.1| putative inner membrane protein translocase component YidC [Brucella sp. 83/13] gi|265985155|ref|ZP_06097890.1| inner membrane protein oxaA [Brucella sp. 83/13] gi|306839545|ref|ZP_07472352.1| inner membrane protein translocase component YidC [Brucella sp. NF 2653] gi|264663747|gb|EEZ34008.1| inner membrane protein oxaA [Brucella sp. 83/13] gi|306405377|gb|EFM61649.1| inner membrane protein translocase component YidC [Brucella sp. NF 2653] Length = 610 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 272/607 (44%), Positives = 387/607 (63%), Gaps = 33/607 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------- 45 ME N+F+ IALS++I+ WQ FY+ P+ E E+ I+ ++ Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEA-QREQARIEEQQRQAQQAAQNRQASSST 59 Query: 46 -------------PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 P Q D A + R A++ SPR+E+ PSL GSINL GA+ DDL Sbjct: 60 GDTPQMPANPDSIPGQGDTKAAGAPLT-RDAAIAQSPRIEIDTPSLRGSINLTGARLDDL 118 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L+ YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP Sbjct: 119 YLKKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGTVPGPNTVWVVEGNNKLTP 178 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTAT 211 +TP+ L + N N+ F+R IS+D+ Y+F + DT+ N+ + + GR+ R ++P+ A+ Sbjct: 179 STPVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINDGGSTVSLASYGRVTRFNQPEHAS 238 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETS 270 T+ + EG I V+G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ Sbjct: 239 ATYVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEK 298 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 F +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F Sbjct: 299 FTGRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQF 358 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK Sbjct: 359 DLLIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMK 418 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ ++ Sbjct: 419 LMQPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVT 477 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P Sbjct: 478 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPT 537 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L Sbjct: 538 PPDPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNL 597 Query: 571 RSTFSKN 577 + F + Sbjct: 598 KGLFRRK 604 >gi|148558174|ref|YP_001257934.1| putative inner membrane protein translocase component YidC [Brucella ovis ATCC 25840] gi|148369459|gb|ABQ62331.1| inner-membrane protein, 60 kDa [Brucella ovis ATCC 25840] Length = 610 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 272/607 (44%), Positives = 387/607 (63%), Gaps = 33/607 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------- 45 ME N+F+ IALS++I+ WQ FY+ P+ E E+ I+ ++ Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEA-QREQARIEEQQRQAQQAAQNRQASSST 59 Query: 46 -------------PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 P Q D A + R A++ SPR+E+ PSL GSINL GA+ DDL Sbjct: 60 GDTPQMPANPDSIPGQGDTKAAGAPLT-RDAAIAQSPRIEIDTPSLRGSINLTGARLDDL 118 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L+ YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP Sbjct: 119 YLKKYHETVSDKSPEIELLAPSSLKQGYFVELGFAGNDATGAVPGPNTVWVVEGNNKLTP 178 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTAT 211 +TP+ L + N ++ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ Sbjct: 179 STPVTLTYTNDKSLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHAS 238 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETS 270 T+ + EG I V+G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ Sbjct: 239 ATYVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEK 298 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 F +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F Sbjct: 299 FTGRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQF 358 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK Sbjct: 359 DLLIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMK 418 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ ++ Sbjct: 419 LMQPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVT 477 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P Sbjct: 478 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPT 537 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L Sbjct: 538 PPDPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNL 597 Query: 571 RSTFSKN 577 + F + Sbjct: 598 KGLFRRK 604 >gi|23500746|ref|NP_700186.1| putative inner membrane protein translocase component YidC [Brucella suis 1330] gi|38503028|sp|Q8FV29|OXAA_BRUSU RecName: Full=Inner membrane protein oxaA gi|23464400|gb|AAN34191.1| inner-membrane protein, 60 kDa [Brucella suis 1330] Length = 610 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 272/606 (44%), Positives = 387/606 (63%), Gaps = 33/606 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------- 45 ME N+F+ IALS++I+ WQ FY+ P+ E E+ I+ ++ Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEA-QREQARIEEQQRQAQQAAQNRQASSST 59 Query: 46 -------------PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 P Q D A + R A++ SPR+E+ PSL GSINL GA+ DDL Sbjct: 60 GDTPQMPANPDSIPGQGDTKAAGAPLT-RDAAIAQSPRIEIDTPSLRGSINLTGARLDDL 118 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L+ YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP Sbjct: 119 YLKKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTP 178 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTAT 211 +TP+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ Sbjct: 179 STPVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHAS 238 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETS 270 T+ + EG I V+G L E KY+ I+ + +F + W+GI+DKYWA+ IP ++ Sbjct: 239 ATYVLHEGLIGVMGQDGLQEIKYAKIKDNKDISFKDVIGGWVGITDKYWAATLIPPQDEK 298 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 F +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F Sbjct: 299 FTGRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQF 358 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK Sbjct: 359 DLLIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMK 418 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ ++ Sbjct: 419 LMQPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVT 477 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P Sbjct: 478 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPT 537 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L Sbjct: 538 PPDPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNL 597 Query: 571 RSTFSK 576 + F + Sbjct: 598 KGLFRR 603 >gi|114706827|ref|ZP_01439727.1| putative inner membrane transmembrane protein [Fulvimarina pelagi HTCC2506] gi|114537775|gb|EAU40899.1| putative inner membrane transmembrane protein [Fulvimarina pelagi HTCC2506] Length = 603 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 278/599 (46%), Positives = 382/599 (63%), Gaps = 26/599 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK------NIQTVKQPNQVDN--- 51 ME N N+ +A+ALS++++ WQ + PR++E + + ++QT + P D Sbjct: 1 MEMNRNFLIAMALSIMVLVGWQFLVIGPRMDEQQRQNEIAQNEGSLQTPQTPAGSDQDSL 60 Query: 52 ---SYAAVLI--------DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 S ++ R Q ++ RV + P L GSINL GA+ DDL L+ YH Sbjct: 61 TAPSGRESMVPSPNLPQNQSREQVIAGGNRVTIDTPELTGSINLTGARLDDLRLKHYHET 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 V +SP + LLSP N YFAE + +L +NT W G LTP TP+ L Sbjct: 121 VDDSSPTIVLLSPEELPNGYFAEYGLIQPGTG-QLVGANTEWQAEDGAELTPDTPVTLTA 179 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEG 219 + + R IS+D++++F DTV N ++ SP GRI R+ KP+ A F + EG Sbjct: 180 TTESGLTVTRRISVDDNFMFTYEDTVENTGDAAVQVSPYGRIARYSKPEVAA-AFVLFEG 238 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNS--WLGISDKYWASVFIPSKETSFHSQFKY 277 + V G++ L E YSDIE + S+ WLGI+DKYWA+ +P F SQF Y Sbjct: 239 LLGVFGEEGLDEVSYSDIEDDTRLRQPASSGGGWLGITDKYWATALVPEVGRDFESQFLY 298 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 ++G + YQ +F ++ ++I PG + + N FAGAKE I+ YE+ L I +F LIDWG Sbjct: 299 RTNGRSHYQTEFVSDPVSIAPGAAASMVNRTFAGAKEVDKINAYEEQLNIRQFGQLIDWG 358 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WFYFI +PMF + Y Y LVGNFGIAI+ TV +KL+FFPLA K Y S A MK IQPK+ Sbjct: 359 WFYFITRPMFTALDYIYRLVGNFGIAILAVTVILKLIFFPLANKSYKSMARMKTIQPKVM 418 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ELRE+FK Q Q+ M+QLY++ INP AGCWPIL+QIPVFFA+YKV+ +++EMRHAP Sbjct: 419 ELRERFKDDR-QKQQQEMMQLYRSEKINPAAGCWPILIQIPVFFALYKVLYVTIEMRHAP 477 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F+GWI+DLAA DPT+IF LFG+LP+ +PG + +G+WP++M L+MFIQM+++P P D QA Sbjct: 478 FFGWIQDLAAPDPTSIFNLFGLLPYDVPGILLIGVWPLLMGLTMFIQMRLNPTPPDPTQA 537 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 MI WMPVVF F L++FPAGL+IYW+W+N +SI+QQ+VIMK +GA+I L D LR F + Sbjct: 538 MIFTWMPVVFTFMLATFPAGLVIYWTWNNFLSIIQQSVIMKRNGAKIELFDNLRGMFKR 596 >gi|161511178|ref|NP_541252.2| putative inner membrane protein translocase component YidC [Brucella melitensis bv. 1 str. 16M] gi|256043891|ref|ZP_05446811.1| putative inner membrane protein translocase component YidC [Brucella melitensis bv. 1 str. Rev.1] gi|260565068|ref|ZP_05835553.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. 16M] gi|265990314|ref|ZP_06102871.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. Rev.1] gi|38503114|sp|Q8YDA3|OXAA_BRUME RecName: Full=Inner membrane protein oxaA gi|260152711|gb|EEW87804.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. 16M] gi|263000983|gb|EEZ13673.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. Rev.1] Length = 610 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 273/606 (45%), Positives = 386/606 (63%), Gaps = 33/606 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------- 45 ME N+F+ IALS++I+ WQ FY+ P+ E E+ I+ ++ Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEA-QREQARIEEQQRQAQQAAQNRQASSST 59 Query: 46 -------------PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 P Q D A + R A++ SPR+E+ PSL GSINL GA+ DDL Sbjct: 60 GDTPQMPANPDSIPGQGDTKAAGAPLT-RDAAIAQSPRIEIDTPSLRGSINLTGARLDDL 118 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L+ YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP Sbjct: 119 YLKKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTP 178 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTAT 211 +TP+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ Sbjct: 179 STPVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHAS 238 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETS 270 T+ + EG I V+G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ Sbjct: 239 ATYVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEK 298 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 F +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F Sbjct: 299 FTGRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQF 358 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK Sbjct: 359 DLLIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMK 418 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ ++ Sbjct: 419 LMQPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVT 477 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM + MF+QM+M+P Sbjct: 478 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGIIMFLQMRMNPT 537 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L Sbjct: 538 PPDPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNL 597 Query: 571 RSTFSK 576 + F + Sbjct: 598 KGLFRR 603 >gi|110632737|ref|YP_672945.1| putative inner membrane protein translocase component YidC [Mesorhizobium sp. BNC1] gi|110283721|gb|ABG61780.1| protein translocase subunit yidC [Chelativorans sp. BNC1] Length = 609 Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust. Identities = 276/606 (45%), Positives = 376/606 (62%), Gaps = 31/606 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-------------EMNNERKNIQTVKQP- 46 ME N N + IALSV+I+ WQ FYV PR++ + E+ Q P Sbjct: 1 MENNRNLLITIALSVVILTLWQVFYVNPRVDAQREAAQIEAQRAQETEEKLGTQGADIPA 60 Query: 47 -------NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 V S R +AL+ + RV + P L G+INL GA+ DDL L+ Y + Sbjct: 61 PGATPGSTAVPGSAIPRTQVTRQEALAGAERVTIDTPRLAGTINLAGARLDDLLLKDYRV 120 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 V +SP + LL P+ YF E+ Y A+ +P +TVW L G L+P +P+ L Sbjct: 121 TVDKDSPNIDLLGPAGLPEGYFVEVGYTGNASTGAVPGPDTVWQLQEGSTLSPGSPVTLS 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQE 218 F N + F RT ++DE+YLF I DT+ N + + + GR R +P+TA + + E Sbjct: 181 FTNDRGLTFLRTFAVDENYLFTITDTIRNAAGEPVEIRNYGRTTRFGQPKTA-GIYILHE 239 Query: 219 GFIAVLGDKSLVEQKYSDI-EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 GFI VLG++ L E YS E + ++ WLGI+DKYWA +P + F +F Y Sbjct: 240 GFIGVLGEEGLREVDYSTAQEDGQVLPGKSADGWLGITDKYWAVTMVPRAQKDFEPRFAY 299 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 SDG RYQA + + +T+ PG +FAGAKE + YE I +FE+LIDWG Sbjct: 300 FSDGRERYQADYLTDPVTVAPGGEAKIETLVFAGAKEVHVVDAYETQHNIRQFELLIDWG 359 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WFYFI KPMF L+ + + L+GNFG+AI+ TTVFVKL+FFPLA K Y S ANMK +QP + Sbjct: 360 WFYFITKPMFYLIDWLFRLLGNFGVAILATTVFVKLVFFPLANKSYKSMANMKKVQPALL 419 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+REK+ + Q+AM++LYK INPLAGCWPIL+QIPVFFA+YKV+ +++EMRHAP Sbjct: 420 EIREKYADDKMK-QQQAMMELYKKEKINPLAGCWPILIQIPVFFALYKVLYVTIEMRHAP 478 Query: 458 FWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 F+GWI+DL+A DPT IF LFG+LPF F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 479 FFGWIQDLSAPDPTTIFNLFGLLPFDPSQVPVFGPFLMLGVWPIIMGITMFLQMRMNPTP 538 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D QAMI NWMPV+F F L++FPAGL+IYW+W+N++SI+QQ VIMK GA+I L D + Sbjct: 539 PDPTQAMIFNWMPVIFTFMLATFPAGLVIYWAWNNLLSIIQQGVIMKRQGAKIELWDNMV 598 Query: 572 STFSKN 577 + F + Sbjct: 599 NLFRRK 604 >gi|90419893|ref|ZP_01227802.1| putative inner membrane protein [Aurantimonas manganoxydans SI85-9A1] gi|90335934|gb|EAS49682.1| putative inner membrane protein [Aurantimonas manganoxydans SI85-9A1] Length = 609 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 268/605 (44%), Positives = 375/605 (61%), Gaps = 30/605 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ-TVKQPN---QVDNSYAAV 56 M+ N N+ +A+ LS+ ++ WQ V PR+E E + Q TV Q + Q + A Sbjct: 1 MQNNRNFLIAMILSIGVLVGWQFLVVSPRMEAQRLETEAAQPTVAQNDGSLQTPQTPAGT 60 Query: 57 LIDD-----------------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 D+ R QA++ RV + P+L GSINL GA+ DDL Sbjct: 61 PQDNVAAPAGRESVVPEQDALPATDETREQAIAAGSRVAIDTPALSGSINLTGARLDDLR 120 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ YH V +SP + LLSP + YFAE Y+ ELP +T+W G+ LTP Sbjct: 121 LKNYHETVDDSSPTIVLLSPERLPSGYFAEFGYLGRDAG-ELPGPSTIWQAEGGQSLTPN 179 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 +P+ L N + FERTIS+D+ ++F DT+ N + S GR+ R+ + Sbjct: 180 SPVTLTATNGAGVTFERTISVDDRFMFTYEDTIRNEGSAPLTLSSYGRVTRYSKPEVASV 239 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFH 272 + + EG + V GD L E KYS IE +S+S WLGI+DKYWA+ +P F Sbjct: 240 YVLFEGLLGVFGDDGLSEIKYSTIEDDQRYTPPKSSSGWLGITDKYWATTLVPEAGRPFQ 299 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 S+F Y++DG YQ ++ + +T+ PG + T + FAGAK I YE+ I +F Sbjct: 300 SRFLYMTDGRPHYQTEYVTDPVTVEPGATATNVSRTFAGAKVVSDIDSYEERYDIRQFGQ 359 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI +PMF + + Y+++GNFG+AI+ TV +KL+FFPLA K Y S A MKN+ Sbjct: 360 LIDWGWFYFITRPMFHALDWLYSVIGNFGVAILAVTVVLKLIFFPLANKSYKSMARMKNM 419 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPKI E+RE+FK Q Q+ M+++Y+ INP AGCWPIL+QIPVFFA+YKV+ +++E Sbjct: 420 QPKIMEMRERFKDDK-QKQQQEMMRIYREEKINPAAGCWPILIQIPVFFALYKVLYVTIE 478 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG++P LP + VG+WPI+M ++MF+QM+++P P Sbjct: 479 MRHAPFFGWIQDLAAPDPTSIFNLFGLIPLELPHLLMVGVWPILMGITMFVQMRLNPTPP 538 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D Q MI WMPVVF F L+SFPAGL+IYW+W+N++S++QQ+VIMK +G +I L D LR Sbjct: 539 DPTQQMIFTWMPVVFTFMLASFPAGLVIYWTWNNLLSVIQQSVIMKRNGTKIELWDNLRG 598 Query: 573 TFSKN 577 F + Sbjct: 599 MFRRK 603 >gi|17984422|gb|AAL53516.1| 60 kDa inner membrane protein yidc [Brucella melitensis bv. 1 str. 16M] Length = 588 Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust. Identities = 256/534 (47%), Positives = 358/534 (67%), Gaps = 4/534 (0%) Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 P Q D A + R A++ SPR+E+ PSL GSINL GA+ DDL L+ YH VS S Sbjct: 51 PGQGDTKAAGAPLT-RDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYLKKYHETVSDKS 109 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 P + LL+PS+ K YF EL + +P NTVW + LTP+TP+ L + N N Sbjct: 110 PEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPSTPVTLTYTNDKN 169 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAVL 224 + F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ T+ + EG I V+ Sbjct: 170 LTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASATYVLHEGLIGVM 229 Query: 225 GDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ F +F + ++ Sbjct: 230 GQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFTGRFSHFTNDRP 289 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++LIDWGWFYFI Sbjct: 290 RYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDLLIDWGWFYFIT 349 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK +QPK+ E+REK+ Sbjct: 350 KPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLMQPKMTEIREKY 409 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++EMRHAPF+GWI+ Sbjct: 410 ADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIEMRHAPFFGWIQ 468 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM + MF+QM+M+P P D QA I WM Sbjct: 469 DLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGIIMFLQMRMNPTPPDPTQAAIFTWM 528 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 P++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ F + Sbjct: 529 PIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKGLFRRK 582 >gi|319780382|ref|YP_004139858.1| membrane protein insertase, YidC/Oxa1 family domain containing [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166270|gb|ADV09808.1| membrane protein insertase, YidC/Oxa1 family domain containing [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 603 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 273/599 (45%), Positives = 380/599 (63%), Gaps = 23/599 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----ERKNIQTVKQ----------- 45 ME N N+F+ IALSV+I+ WQ FYV PR E E++ ++ K+ Sbjct: 1 MENNRNFFITIALSVLILAVWQYFYVLPRSEAQREAARVEQQRVEEQKKAAGTNPGTDTG 60 Query: 46 ----PNQVDNSYA--AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 P + N+ AV R QAL+ + R ++ PSL GSINL GA+ DDL L+ Y Sbjct: 61 TPAAPGAIPNAPGTDAVTPAGREQALATTTRAKIDTPSLEGSINLTGARLDDLKLKHYTE 120 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 V NSP ++LL+P+ N Y+AE+ +V +P TVW + LTPTTP+ L Sbjct: 121 TVDKNSPEISLLNPAALPNGYYAEIGFVGNDKTGAVPGPETVWAVDGNATLTPTTPVTLT 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N + F+RT S+D +Y+F + DTV N + S GR+ R +T+ + EG Sbjct: 181 YSNDKGLTFKRTFSVDTNYMFTVSDTVQNAGTAAVSLSNYGRVTRFDKPLVASTYVLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEKS-SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 I G + L E KY+ IEK + ++ WLGI+DKYWA +P+++ F ++ Y Sbjct: 241 LIGFTGTEGLQEHKYASIEKDKQFTPGKSTDGWLGITDKYWAVTLVPTEKQPFQPRYAYF 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 DG RYQ+ F + IT+ G+S T + +FAGAKE I+ Y +D I RF++LIDWGW Sbjct: 301 EDGRHRYQSDFLTDPITVDAGQSATVESEIFAGAKEVGKINAYAEDRHIKRFDLLIDWGW 360 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+FI KPMF L+ Y GNFG+AI+ TTV VK +F+PLA K Y S ANMK +QPK+ E Sbjct: 361 FHFITKPMFWLIDTLYKFFGNFGLAILATTVIVKAIFYPLANKSYASMANMKKVQPKMLE 420 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+ + Q+AM++LYKT INPLAGCWP+ LQIPVFF++YKV+ I++EMRHAPF Sbjct: 421 IREKYADDKMK-QQQAMMELYKTEKINPLAGCWPVALQIPVFFSLYKVLYITIEMRHAPF 479 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI+DLAA DPT++F LFG++P LP + +G+WP+IM ++MF+QM+M+P P D QA Sbjct: 480 FGWIQDLAAPDPTSLFNLFGLIPVTLPHMLMIGVWPLIMGVTMFLQMRMNPTPPDPTQAA 539 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 I WMPV+F F ++ FPAGL+IYW+W+N +SI+QQ +IMK GA+I L D L + F K Sbjct: 540 IFTWMPVIFTFMMAGFPAGLVIYWAWNNTLSILQQGIIMKRQGAKIELWDNLVALFRKK 598 >gi|299132593|ref|ZP_07025788.1| membrane protein insertase [Afipia sp. 1NLS2] gi|298592730|gb|EFI52930.1| membrane protein insertase [Afipia sp. 1NLS2] Length = 611 Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust. Identities = 267/606 (44%), Positives = 369/606 (60%), Gaps = 32/606 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN-------------NERKNIQTVKQPN 47 M N N +A+ LS +I+ AWQ FY P++E+ N T + P Sbjct: 1 MTDNRNTIIAVVLSGLILLAWQYFYNMPQMEKQRAAQQTQMQAANPANSSAPAATTQTPA 60 Query: 48 QVDNS----------YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + A + DRA+ ++ SPRV++ PSLIGSI LKGA+ DD+ Y Sbjct: 61 AGSAAPTPASPGAEQQQAAPVKDRAEVIASSPRVKIDTPSLIGSIALKGARIDDVAFVKY 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPI 156 V SP L SP+ TK Y+AE +V A + +LP +TVW LTPTTP+ Sbjct: 121 RETVDPKSPAEVLFSPTGTKAPYYAEFGFVPAAGASAKLPGLDTVWTQQGSNALTPTTPV 180 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + N ++F RT+S+DE Y+F I D V N+ P G I RH + + + Sbjct: 181 VLTYDNGEGLVFTRTLSVDEKYVFTIKDEVANSGTAPATLYPFGLISRHGLPETSGYYIL 240 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 EG I VLGDK L E Y ++++ S F SN+WLGI+DKYWA+ +P S ++F Sbjct: 241 HEGPIGVLGDKGLQEYTYKKMDETKASEFKVSNAWLGITDKYWAATLLPDPAASLTARFS 300 Query: 277 YLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 G R YQ + + +T+ G TTT LFAGAKE T+ Y+K L + RFE+LID Sbjct: 301 SKLSGTTRVYQTDYLLDPVTVQAGGHATTTTRLFAGAKEVATVDAYDKQLKLNRFELLID 360 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWFYFI KPMF + + Y L GNFG+AI+L TV VK +FFPLA K Y S A MK +QP+ Sbjct: 361 WGWFYFITKPMFWTIDHLYRLFGNFGVAILLVTVIVKAIFFPLANKSYASMAKMKAVQPQ 420 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + L+EK+ + Q+ M+ +YK INP+AGC PI +QIPVFFA+YKV+ I++EMRH Sbjct: 421 LAALKEKYPDDKVK-QQQEMMDIYKKEKINPIAGCLPIAIQIPVFFALYKVLFITIEMRH 479 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSP 509 APF+GWI DL+A DPT++F LFG+LP+ + ++ +G WP+IM ++M+ QMK++P Sbjct: 480 APFFGWIHDLSAPDPTHVFNLFGLLPYDPSAVPIIGHYLAIGAWPLIMGVTMWFQMKLNP 539 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D Q MI +WMPV+F F L+SFPAGL+IYW+W+N +S++QQ+ IMK +G +I L D Sbjct: 540 APPDATQKMIFDWMPVIFTFMLASFPAGLVIYWAWNNTLSVIQQSAIMKKNGVKIELFDN 599 Query: 570 LRSTFS 575 L+STF+ Sbjct: 600 LKSTFA 605 >gi|304392412|ref|ZP_07374353.1| inner membrane protein OxaA [Ahrensia sp. R2A130] gi|303295516|gb|EFL89875.1| inner membrane protein OxaA [Ahrensia sp. R2A130] Length = 612 Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust. Identities = 265/613 (43%), Positives = 380/613 (61%), Gaps = 34/613 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY---AAVL 57 M+ N+ +A LS+ +V+AWQ + PR+E + Q V++ + A Sbjct: 1 MDNQRNFILAAVLSLGVVFAWQALVINPRMEAERAAIEAQQKVEEARTAEAESVPGATTA 60 Query: 58 IDDRAQALSMSP-------------------------RVELKNPSLIGSINLKGAQFDDL 92 A+A + P RV L +P L GS+NL+G + DDL Sbjct: 61 PQTGAEAGAGVPAGQATSGDGAVPGAAPAASAQSSAGRVPLASPRLEGSVNLQGGRIDDL 120 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L Y V SP + LL+P+ +AYFAE Y +LP +T+W L +G+ LTP Sbjct: 121 RLLDYRETVDDTSPNIQLLTPAGNPDAYFAEFGYSPNEAAGQLPGPSTIWQLAAGERLTP 180 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTAT 211 T I L + N + F RTI++D+ Y+F I V N S + P GRI R+ KP+TA Sbjct: 181 ETSISLQYVNDKGLTFTRTIAMDDDYMFTIEQRVKNESGTDVSLRPYGRIARYGKPETA- 239 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKET- 269 + + EG I +G++ L E Y DIE I+ S+ WLGI+DKYWA+ IP + Sbjct: 240 GIYVLHEGLIGSVGEQGLDEVDYGDIEDDKRITKEPASSGWLGITDKYWATALIPQTKDG 299 Query: 270 -SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 +F + + Y S G YQ+ + A+ ++I G+ T FAGAK+ I Y ++L IP Sbjct: 300 GTFTAHYNYYSAGTPFYQSDYLASALSIPNGQEQGVTTRFFAGAKKVDIIDAYAENLEIP 359 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F+ +IDWGWFY++ KP+F+LM++ Y+L+GNFG+AI++ TV VK +FFPLA K Y S AN Sbjct: 360 LFDKIIDWGWFYWLTKPLFLLMNWVYHLIGNFGVAILVVTVLVKAVFFPLANKSYASMAN 419 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 MK +QP++ +RE+ K + Q AM++LYK INP AGCWP+L+QIPVFFAIYKVI Sbjct: 420 MKKVQPQMTAIREQHKDDA-KAQQAAMMKLYKEEKINPAAGCWPVLIQIPVFFAIYKVIY 478 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 +++EMRHAPF+GWI+DL+A DPT+IF LFG+LPF +P F+ +G+WP++M ++MF+QM+M+ Sbjct: 479 VTIEMRHAPFFGWIQDLSAPDPTSIFNLFGLLPFEVPLFLMIGVWPLLMGITMFVQMQMN 538 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P P D QAMI W+PVVF F L++FPAGL+IYW+W+N +SI+QQ +IMK GA+I L D Sbjct: 539 PAPPDPTQAMIFKWLPVVFTFMLATFPAGLVIYWAWNNFLSIIQQGLIMKRQGAKIELWD 598 Query: 569 RLRSTFSKNYNSQ 581 L+ FSK +++ Sbjct: 599 NLKGIFSKKTDAE 611 >gi|254473802|ref|ZP_05087197.1| 60 kDa inner membrane insertion protein [Pseudovibrio sp. JE062] gi|211957188|gb|EEA92393.1| 60 kDa inner membrane insertion protein [Pseudovibrio sp. JE062] Length = 603 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 264/599 (44%), Positives = 379/599 (63%), Gaps = 26/599 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM---------NNERKNIQT--------- 42 M N N VAI LS++++ WQ F P++E N+ ++ + Sbjct: 1 MNDNRNMIVAIVLSLVVLLGWQYFIAGPQLEAQQEAQQAQLANDAQQAGSSSPVALPEGA 60 Query: 43 ---VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 V P + A + R QAL+ SPR+ + PSL GS+NLKGA+ DDL L+GY Sbjct: 61 SGQVTAPGTESGTAAQSFVS-REQALAASPRLTIDTPSLSGSVNLKGAKLDDLRLKGYRQ 119 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKL 158 ++ +S V L SP + Y+AE +V+ I+LPN+ TVW + LTP++PI L Sbjct: 120 TIAKDSETVVLFSPKGSPAPYYAEHGWVADPGVQIKLPNAETVWTAETSGNLTPSSPIVL 179 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 + N ++F+RT S+DE+Y+F + V NNS ++ P G I R+ F + E Sbjct: 180 NWDNGEGLVFKRTFSVDENYMFTVDQEVQNNSGQNVQLYPYGLIARNGEPETAGFFVLHE 239 Query: 219 GFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 G I V+GD+ L E YSD I+ SI + WLG +DKYWA+ IP+ T F F Y Sbjct: 240 GLIGVIGDEGLQEINYSDLIDDGSIRPGRANMGWLGFTDKYWAATLIPTPGTEFQPNFSY 299 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + +Q+ + + ++ G IT ++ L+AGAK I Y+ I F+++IDWG Sbjct: 300 NARTQ-NFQSDYLGSATQVVDGAKITNSSLLYAGAKITSLIDGYQNSYDILNFDLMIDWG 358 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WFYF+ KPMF + + Y+LVGNFGIAI+L TV VK +FFPLA K YVS + MK +QPK+ Sbjct: 359 WFYFLTKPMFWTIDWLYSLVGNFGIAILLVTVIVKAIFFPLANKSYVSMSRMKLVQPKMT 418 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+REK+K Q Q+AM++LYKT INPLAGC P+L+QIPVFF++YKV+ +++EMRHAP Sbjct: 419 EIREKYKDDK-QKQQQAMMELYKTEKINPLAGCLPMLIQIPVFFSLYKVLFVTIEMRHAP 477 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F+GWI+DL+A DPT IF LFG++P+ P F+ +G+WP+IM ++MF+QMKM+P PA+ Q Sbjct: 478 FFGWIQDLSAPDPTTIFNLFGLIPWDPPTFLMIGVWPLIMGITMFLQMKMNPAPAEPAQQ 537 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 MI NWMPV+F F L++FPAGL+IYW+W+N +S++QQ VIM+ G ++ L D L++TF + Sbjct: 538 MIFNWMPVIFTFMLATFPAGLVIYWAWNNTLSVLQQGVIMRRQGVKLELFDNLKATFKR 596 >gi|254502069|ref|ZP_05114220.1| 60Kd inner membrane protein [Labrenzia alexandrii DFL-11] gi|222438140|gb|EEE44819.1| 60Kd inner membrane protein [Labrenzia alexandrii DFL-11] Length = 608 Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust. Identities = 260/601 (43%), Positives = 370/601 (61%), Gaps = 26/601 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE---------------------MNNERKN 39 + N N +AI LS+I++ AWQ FY P++E +N + Sbjct: 2 ISENRNTILAIVLSLIVLLAWQYFYAGPQLERQQAALQAQQEAEAAQQSAPGGVNPDAPT 61 Query: 40 IQTVKQPNQVDNSYAAVL-IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 V S + R QALS + RV + P L GSINL G + DDL L+ YH Sbjct: 62 PSVAGSGTTVAPSATSPQGFASREQALSATQRVVIDTPRLEGSINLTGGRLDDLRLKDYH 121 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIK 157 V +SP + L SP+ + N Y+++ +V+ A +I LP +T+W++ LTP+TP+ Sbjct: 122 ETVDRSSPTIVLFSPTGSPNPYYSDYGWVADAGASITLPGPDTIWSVNGSSDLTPSTPLT 181 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 L + N ++F RT S+DE+Y+F + +VTNNS D + P G I R T + + Sbjct: 182 LSWDNGEGLVFNRTFSVDENYMFDVTQSVTNNSGDVVTLYPYGLIARKGIPETTGIWILH 241 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 EG + V G++ LVE YSD+E+ + WLGI+DKYWA+ IP+ F F Sbjct: 242 EGLLGVFGEEGLVEVDYSDLEEDGPVRPAAVDRGWLGITDKYWAATLIPTPGQEFQPGFS 301 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 Y + +QA + N + + G T+++LFAGAKE + YE L+I RFE+LIDW Sbjct: 302 YAAQ-SGNFQADYLGNAVVVPAGGVGETSSYLFAGAKETNLLDAYEASLSIERFELLIDW 360 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GWFYF+ KPMF + + ++ GNFG+AI+L TV +KL FFPLA K YVS + MK +QP++ Sbjct: 361 GWFYFLTKPMFYAIDFLFHYFGNFGVAILLVTVIIKLFFFPLANKSYVSMSKMKLVQPQM 420 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E+REK+ Q Q+A+++LYK INPLAGC PIL+QIPVFFA+YKV+ +++EMRHA Sbjct: 421 TEIREKYADDR-QKQQQALMELYKKEKINPLAGCLPILIQIPVFFALYKVLFVTIEMRHA 479 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 PF+GWI+DL+A DPT++F LFG++P+ P + +G+WP+IM ++MF+QMKM+P P D Q Sbjct: 480 PFFGWIQDLSAPDPTSLFNLFGLIPWDPPQLLMLGVWPLIMGITMFVQMKMNPAPPDPTQ 539 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 MI WMPVVF F L+SFPAGL+IYW+W+N +SI QQ VIM G ++ L D + S F + Sbjct: 540 QMIFTWMPVVFTFMLASFPAGLVIYWAWNNSLSIAQQWVIMSRQGVKVELWDNIGSMFKR 599 Query: 577 N 577 Sbjct: 600 K 600 >gi|118589754|ref|ZP_01547159.1| putative inner membrane protein translocase component YidC [Stappia aggregata IAM 12614] gi|118437840|gb|EAV44476.1| putative inner membrane protein translocase component YidC [Stappia aggregata IAM 12614] Length = 606 Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust. Identities = 259/599 (43%), Positives = 372/599 (62%), Gaps = 24/599 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE------------------EMNNERKNIQT 42 + N N +AI LS+I++ WQ F P++E + N K T Sbjct: 2 ISENRNTILAIVLSLIVLLGWQYFVAAPQLERQQAELQAQQEAAQQTATDSANPSKPQPT 61 Query: 43 VKQPNQVDNSYAA--VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 Q A + +R AL+ S RV + PSL GS+NLKG + DD+ L+ YH Sbjct: 62 GSQGANTAAPAAGQQMAFANREAALAASQRVTIDTPSLEGSVNLKGGRLDDIRLKDYHET 121 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLV 159 V+ +SP + L SPS + Y+A+ +V N+ LP +TVW++ LTP+TP+ L Sbjct: 122 VNKSSPTIVLFSPSGSPKPYYADYGWVGDPGTNLALPGPDTVWSVDGEATLTPSTPLTLS 181 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N ++F+RT S+D++Y+F + +V N D + P G I R + + EG Sbjct: 182 WDNGAGLIFKRTFSVDDNYMFTVNQSVENTGSDAVTLYPYGLIARKGMPETNGIYILHEG 241 Query: 220 FIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + V G + L E Y D +E+SSI WLGI+DKYWA+ IP+ F F + Sbjct: 242 LLGVFGAEGLKEVDYDDLVEESSIRPSKVDQGWLGITDKYWAATLIPTPGQEFQPGFSH- 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 S +QA + N +T+ G + T+++LFAGAKE + YE+ L+I RFE+LIDWGW Sbjct: 301 SATTDVFQADYLGNGVTVAGGSTGETSSYLFAGAKETKLLDGYEEALSIERFELLIDWGW 360 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FYF+ KPMF + YF++L GNFG+AI++ TV VKL+FFPLA K YVS + MK +QP++ E Sbjct: 361 FYFLTKPMFFAIDYFFHLFGNFGVAILVVTVIVKLIFFPLANKSYVSMSKMKLVQPQMTE 420 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+ Q Q+A+++LYK INPLAGC PI++QIPVFF++YKV+ +++EMRHAPF Sbjct: 421 IREKYSDDR-QKQQQALMELYKKEKINPLAGCLPIVVQIPVFFSLYKVLYVTIEMRHAPF 479 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI+DL+A DPT +F LFG++P+ P + +G+WP+IM ++MFIQMKM+P P D Q M Sbjct: 480 FGWIQDLSAPDPTTLFNLFGLIPWDPPQMLMLGVWPLIMGITMFIQMKMNPAPPDPTQQM 539 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 I WMPV+F F L+SFPAGL+IYW+W+N +S+ QQ VIM+ GA++ L D L S F + Sbjct: 540 IFTWMPVIFTFMLASFPAGLVIYWAWNNTLSVTQQYVIMRRQGAKVELWDNLGSLFKRK 598 >gi|188581560|ref|YP_001925005.1| 60 kDa inner membrane insertion protein [Methylobacterium populi BJ001] gi|254773003|sp|B1Z8E7|OXAA_METPB RecName: Full=Inner membrane protein oxaA gi|179345058|gb|ACB80470.1| 60 kDa inner membrane insertion protein [Methylobacterium populi BJ001] Length = 614 Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust. Identities = 259/607 (42%), Positives = 373/607 (61%), Gaps = 36/607 (5%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEM----------NNERKNIQTVKQPNQVDNS--- 52 N FVAIALS++++ W F P E N ++ + P+ + S Sbjct: 7 NMFVAIALSLVVLLGWHYFVTGPASERQRQAVQSQTAQNTAPQSADGIPSPSPREGSPNA 66 Query: 53 --------YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 AA R AL+ S RV + P+L GSI LKGA+ DD++L+ YH VS Sbjct: 67 PVPGTVPGAAAQGPISREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHETVSDE 126 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SP + LLSP+ + N Y+AE +V AN LPN +T+W G +L P P+ L + N Sbjct: 127 SPRIVLLSPAGSANPYYAEFGWVG-ANAGPLPNGDTLWK-ADGDLLAPGKPLTLTWDNGQ 184 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAV 223 +LF+R +++D+ ++F + D V N+S + + P + R KPQT + + EG I V Sbjct: 185 GLLFKRIVAVDDKFMFTVRDEVENSSANPVTLYPYSLVSRWGKPQT-QGYYVLHEGLIGV 243 Query: 224 LGDKSLVEQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQ 274 LG L E Y + K + W+GI+DKYWA+ IP ++ F Sbjct: 244 LGSDGLQEYTYDKVGKEPAYGGAATQGKAWSNVTGGWVGITDKYWAAAAIPDQDKPFTGA 303 Query: 275 FKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 F +DG + YQ + +T+ P S TT LFAGAKE I+ YE+DL I +F+++ Sbjct: 304 FTERTDGATKIYQTSVRGDAVTVAPSASSATTQRLFAGAKEVNQINAYERDLGIKQFDLM 363 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 IDWGWF+F+ KPMF + +FY+L+GNFG++I+L T+ +K+ F P+A + YVS A MK +Q Sbjct: 364 IDWGWFWFLTKPMFRALDFFYHLLGNFGVSILLVTLILKIFFLPIANRSYVSMAKMKAVQ 423 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ +RE++K + Q+AM++LYK INP+AGCWP+L+QIPVFFA+YKV+ I++EM Sbjct: 424 PEMTSIRERYKDDRTK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFITIEM 482 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 RHAPF+GWI DLAA DPT+I LFG+LPF P F+H+G+WPIIM ++MFIQMKM+P P D Sbjct: 483 RHAPFFGWIHDLAAPDPTSIMNLFGLLPFAAPDFIHLGVWPIIMGITMFIQMKMNPAPPD 542 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 QA + +MP+VF F L SFPAGL+IYW+W+N +S++QQ +IM+ +G ++ L D LR Sbjct: 543 PVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYIIMRRNGVKVELWDNLRGM 602 Query: 574 FSKNYNS 580 F + S Sbjct: 603 FKRGNKS 609 >gi|170749903|ref|YP_001756163.1| 60 kDa inner membrane insertion protein [Methylobacterium radiotolerans JCM 2831] gi|254773004|sp|B1LTW1|OXAA_METRJ RecName: Full=Inner membrane protein oxaA gi|170656425|gb|ACB25480.1| 60 kDa inner membrane insertion protein [Methylobacterium radiotolerans JCM 2831] Length = 617 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 262/609 (43%), Positives = 374/609 (61%), Gaps = 37/609 (6%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNN-ERKNIQTVKQPNQV-----------DNSY 53 N FVAI LS++++ WQ F PR+E+ E +N +QP V + Sbjct: 7 NMFVAIGLSLLVLLGWQYFVAGPRMEQQRQIEAQNKAAQQQPPGVTPDGVPSPSPKEGGP 66 Query: 54 AAVLID----------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 AA R AL+ SPRV ++ P+L GSI LKG + DD++L+ YH + Sbjct: 67 AAPAPGTLPTAQGGPVSREAALARSPRVRIETPALSGSIALKGGRVDDVSLKNYHETIDP 126 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 SP + L SP+ T+ Y+AE +V AN LP ++T+W GK L+P P+ L + N Sbjct: 127 KSPEIVLFSPAGTETPYYAEFGWVG-ANAGPLPTNDTLWT-SDGKTLSPGMPVTLTWDNG 184 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIA 222 ++F+R I++D+ Y+F I D V N I P + R KP T + + EG I Sbjct: 185 AGLVFKRIIAVDDKYMFTIRDEVENKGSGAITLYPYSLVSRWGKPHT-QGYYVLHEGMIG 243 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHS 273 LG+ L E Y + K + ++GI+DKYWA+ IP ++T + Sbjct: 244 YLGNDGLQEFTYDKLAKEGAYGGANTKGKAWTGVTGGFVGITDKYWAAAAIPDQDTPYTG 303 Query: 274 QFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 F +DG YQA + + + G S T T LFAGAKE I++YEKDL I F++ Sbjct: 304 AFTDRTDGATNVYQASVRGDAVNLAAGASATATQRLFAGAKEVNVINNYEKDLGIKHFDL 363 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +IDWGWF+FI KPMF + +FY+L GNFG++I++ T +KLLF P+A + YVS A MK + Sbjct: 364 MIDWGWFFFITKPMFRALDFFYHLFGNFGVSILVVTFCLKLLFLPIANRSYVSMAKMKAV 423 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP++ +RE++K + Q+A ++LYK INP+AGCWP+L+QIPVFFA+YKV+ I++E Sbjct: 424 QPEMAAIRERYKDDRMK-QQQATMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFITIE 482 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+I LFG+LPF P F+H+G+WPIIM ++MF+QMKM+P P Sbjct: 483 MRHAPFFGWIRDLAAPDPTSIVNLFGLLPFPAPDFVHLGVWPIIMGITMFVQMKMNPAPP 542 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D LRS Sbjct: 543 DPVQAQIFTFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWDNLRS 602 Query: 573 TFSKNYNSQ 581 TF + ++ Sbjct: 603 TFRRGNGTK 611 >gi|163868925|ref|YP_001610152.1| putative inner membrane protein translocase component YidC [Bartonella tribocorum CIP 105476] gi|161018599|emb|CAK02157.1| translocase precursor subunit [Bartonella tribocorum CIP 105476] Length = 620 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 263/609 (43%), Positives = 381/609 (62%), Gaps = 34/609 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK--------------NIQTVKQP 46 ME N N+F+AI LS +++ AWQ +V P+ ++ N++ + TV Sbjct: 1 MEYNRNFFIAIGLSFLVLIAWQFLHVAPKQAKLQNQQAITQQQQLSKQQSPLSSATVNFS 60 Query: 47 NQVDNSYAAVLIDD------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 + + +I+ R L+ + R+ +K L GSINL GAQFDDL+L+ Y + Sbjct: 61 DDTSTHPSTSIIEQPMTPEVRKAVLAKTERIAIKTNELEGSINLVGAQFDDLHLKKYRVT 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKI-LTPTTPIKL 158 V SP + LL+P K Y AE + S + + LP +T W + LTP+TPI L Sbjct: 121 VDKKSPEIDLLNPKGFKTTYLAEFGFASASLPAKALPQPDTQWQIEGNNTTLTPSTPITL 180 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQ 217 ++ N +F RT+ +D++Y+F I D+++N S I S R+ R P TN T+ + Sbjct: 181 IYNNGQGQIFRRTLFVDDYYMFTIEDSISNESDQPIYLSSYARVARAAPPEHTNATYLLH 240 Query: 218 EGFIAVLGDKSLVEQKYS---------DIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 EG I + GD SL +KY D + S++ + W+GI+DKYWA IP ++ Sbjct: 241 EGMIGIAGD-SLKTEKYKTLAELDPNPDNGQKSMTFSKVTGGWIGITDKYWAVAVIPQQD 299 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + S+F Y YQ+ + +TI P ++ T TN LFAGAK+ I+HY+ +L I Sbjct: 300 KEYTSRFIYFDRLQTHYQSDLLGSLLTIAPNETKTVTNHLFAGAKQVEIINHYQNNLKIN 359 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 +F +LIDWGWF FI KPMF L+ Y GNFGIAI+L TV +K+L FPLA K Y S A Sbjct: 360 KFALLIDWGWFDFITKPMFALIDILYKQTGNFGIAILLVTVLLKILLFPLANKSYQSMAR 419 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 MK +QP++ E++EK+ + Q+A+I+LYKT INPLAGCWP+L+Q P+FFA+YKV+ Sbjct: 420 MKLLQPRLLEIKEKYPDDKNKQ-QQAIIELYKTEKINPLAGCWPMLVQFPIFFALYKVLY 478 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 I++EMRHAPF+GWI+DLAA DPT++F LFG+LP+ P F+ +G WP+IM ++MF+QM+M+ Sbjct: 479 ITIEMRHAPFFGWIQDLAAPDPTSLFNLFGLLPYTTPAFLMIGAWPLIMGITMFLQMRMN 538 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P P D+ QAMI WMPVVF F L+SFP GL+IYW+W+N++SI+QQ ++MK GA+I L D Sbjct: 539 PAPQDQTQAMIFTWMPVVFTFMLASFPVGLVIYWAWNNILSIIQQGIMMKRQGAKIELFD 598 Query: 569 RLRSTFSKN 577 L++ + K+ Sbjct: 599 NLKTMWKKS 607 >gi|319408960|emb|CBI82617.1| translocase precursor subunit [Bartonella schoenbuchensis R1] Length = 611 Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust. Identities = 271/606 (44%), Positives = 385/606 (63%), Gaps = 33/606 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 ME N N+F+AI LS+II AW FYV P+ ++ + Q KQ +++ + Sbjct: 1 MEYNRNFFIAIGLSLIIFVAWHFFYVAPQQAKLQEMQMAQQLSKQSSEIPSTDMHFSDSA 60 Query: 52 --------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 S + ++R+ L+ + R+ +K L GSINL GAQFDDL L+ Y L V Sbjct: 61 QISGSGSISDRPMTPENRSAELAKTNRIAIKTDELEGSINLVGAQFDDLFLKKYRLTVDK 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGK--ILTPTTPIKLVF 160 SP + LL+P+ Y AE + S++ LP S+T W I GK LTP+TP+ L++ Sbjct: 121 GSPEIALLNPNGFNTTYLAEFGFTSSSLPATALPQSHTQWQ-IEGKNTTLTPSTPVTLIY 179 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 N +F RT+S+D HY+F I D++ N S + I SP R+ R P TN T+ + EG Sbjct: 180 NNGQGQIFRRTLSIDNHYMFTIEDSIKNESDNPIYLSPYARVARAAPPEYTNATYLLHEG 239 Query: 220 FIAVLGDKSLVEQKYSDIE---------KSSISNFHESNSWLGISDKYWASVFIPSKETS 270 I + GD SL + Y ++E + S+ + W+GI+DKYWA V IP ++ Sbjct: 240 MIGIAGD-SLKTETYKNLEELNPNPENGQKSMIFSKVTGGWIGITDKYWAVVVIPPQDQE 298 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + S+F Y + + YQ+ ++ +T+ P ++ T TN LFAGAK+ I+ Y+ L I +F Sbjct: 299 YTSRFIYFNQLNTHYQSDLQSSLLTVAPNETKTITNHLFAGAKQVEIINRYQNQLKIRKF 358 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +LIDWGWF FI KPMF L+ FY GNFGIAI+L TV +K+L FPLA K Y S A MK Sbjct: 359 GLLIDWGWFDFITKPMFALIDIFYKQTGNFGIAILLVTVLLKVLLFPLANKSYKSMARMK 418 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QP + E++EK+ + Q+A+I LYKT INPLAGCWP+L+Q P+FFA+YKV+ I+ Sbjct: 419 LVQPMMQEIKEKYADDRVKQ-QQAVIALYKTQKINPLAGCWPMLVQFPIFFALYKVLYIT 477 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P Sbjct: 478 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYEVPTFLILGAWPLIMGITMFLQMQMNPT 537 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QAMI WMPV+F F L+SFPAGL+IYW+W+N +SI+QQ ++MK G +I L + L Sbjct: 538 PPDPTQAMIFTWMPVIFTFMLASFPAGLVIYWAWNNTLSIIQQGIMMKRQGVKIELFNNL 597 Query: 571 RSTFSK 576 ++ F K Sbjct: 598 KAMFHK 603 >gi|307943178|ref|ZP_07658523.1| inner membrane protein OxaA [Roseibium sp. TrichSKD4] gi|307773974|gb|EFO33190.1| inner membrane protein OxaA [Roseibium sp. TrichSKD4] Length = 603 Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust. Identities = 250/594 (42%), Positives = 367/594 (61%), Gaps = 21/594 (3%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEM---------------NNERKNIQTVKQPN 47 N N +AIALS+ ++ AWQ F P++E+ + +R + Q Sbjct: 4 ENRNTLLAIALSLAVLLAWQYFVAQPQLEKQQAALQAQQAAEQAQSDPQRPSAQNAPGAA 63 Query: 48 QVDNSYAA--VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A+ R QA++ S RV L P L GS+NL G + DD+ L+ YH V +S Sbjct: 64 TTGAPSASGQEQFQTREQAIAASERVTLDTPRLSGSVNLVGGRIDDIRLKDYHETVDKSS 123 Query: 106 PIVTLLSPSNTKNAYFAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 P V L SP + ++A+ +VS ++ LP ++TVW+ +G LTP TP+ L F N Sbjct: 124 PTVVLFSPKGSPEPFYADYGWVSDPGADVALPGADTVWSAPAGAQLTPNTPLTLTFDNGG 183 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F+RT S+DE+Y+F + +V N+ + + P G + R TN + + EG + V Sbjct: 184 GLTFKRTFSIDENYMFSVTQSVENSGSEAVTLYPYGLLARTGQPETTNFYILHEGLLGVF 243 Query: 225 GDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 G++ L E Y D+ ++ + + WLGI+DKYWA+ +P +F F + S+ Sbjct: 244 GEEGLKEVDYDDLAETGVDRPGKVDRGWLGITDKYWAATLVPEPGQTFQPSFTH-SNVTD 302 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 YQA F + + I G + ++LFAGAKE + YE L I +FE+LIDWGWFYF+ Sbjct: 303 NYQADFLGSAVVIAAGSTSEANSYLFAGAKETKLLDSYEATLNIEQFELLIDWGWFYFLT 362 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KPMF + + + + GNFG+AI+L TV +KL+FFPLA K YVS + MK +QP++ E+R+++ Sbjct: 363 KPMFFAIDWLFMMFGNFGVAILLVTVAIKLVFFPLANKSYVSMSKMKLVQPQMQEIRDRY 422 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 + Q+A+++LYK INPLAGC PIL+QIPVFFA+YKV+ +++EMRHAPF+GWI+ Sbjct: 423 GDDKAKQ-QQALMELYKKEKINPLAGCLPILIQIPVFFALYKVLFVTIEMRHAPFFGWIQ 481 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+A DPT IF LFG++P+ P + VGIWP++M ++MF+QMKM+P P D Q MI WM Sbjct: 482 DLSAPDPTTIFNLFGMIPWDPPQLLTVGIWPLLMGITMFVQMKMNPAPPDPTQQMIFTWM 541 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 P++F F L+SFPAGL+IYW+W+N +SI QQ VIM G ++ L D L+STF + Sbjct: 542 PIIFTFMLASFPAGLVIYWAWNNFLSIAQQWVIMSRQGVKVELFDNLKSTFKRK 595 >gi|209886640|ref|YP_002290497.1| inner membrane protein OxaA [Oligotropha carboxidovorans OM5] gi|209874836|gb|ACI94632.1| inner membrane protein OxaA [Oligotropha carboxidovorans OM5] Length = 610 Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust. Identities = 259/606 (42%), Positives = 367/606 (60%), Gaps = 32/606 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ-------------TVKQPN 47 M N N +A+ LS +++ WQ FY P + ++ T + P Sbjct: 1 MTDNRNTILAVLLSGVVLLGWQYFYNEPEMARQRAAQQAQTQAANPANSAAPNATTQTPA 60 Query: 48 QVDNS----------YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + + DRA+ ++ SPR++++ P+LIGSI LKGA+FDD++L Y Sbjct: 61 AGSTAPTPGSPTIQQQQGAQVKDRAEVIAASPRIKIETPNLIGSIALKGARFDDVSLVKY 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPI 156 V SP L SPS TK Y+AE +V A I++P +TVW LT TTP+ Sbjct: 121 RETVDPKSPAEVLFSPSGTKAPYYAEFGFVPAAGATIKMPTLDTVWTQEGSNALTSTTPV 180 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + N + F RTIS+D+ Y+F + D V N+ P G I RH + + + Sbjct: 181 VLKYDNGEGLTFTRTISVDDKYVFTVKDDVANSGTAPTTVYPFGLISRHGVPETSGYYIL 240 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 EG I VLGD+ L E Y ++++ S F +N WLGI+DKYWA+ +P + ++F Sbjct: 241 HEGPIGVLGDQGLQEFSYKNMDEKKTSEFKVTNGWLGITDKYWAATLLPDPAAALTARFS 300 Query: 277 YLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 G R YQ + + + + G S TTT LFAGAKE T+ Y+K L + RFE+LID Sbjct: 301 SNLVGPTRIYQTDYLLDPVAVPAGGSATTTTRLFAGAKEVATVDAYDKQLKLNRFELLID 360 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWFYFI KPMF + Y L GNFG+AI+L TV +K +FFPLA K Y S A MK +QP+ Sbjct: 361 WGWFYFITKPMFWAIDQLYRLFGNFGVAILLVTVAIKAVFFPLANKSYASMAKMKAVQPQ 420 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + L+EK+ + Q+ M+++YK INP+AGC PI +QIPVFFA+YKV+ I++EMRH Sbjct: 421 LTALKEKYPDDRVK-QQQEMMEIYKKEKINPIAGCLPIAIQIPVFFALYKVLFITIEMRH 479 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSP 509 APF+GWI+DL+A DPT+IF LFG+LPF + ++ +G WP+IM ++M+ QMK++P Sbjct: 480 APFFGWIRDLSAPDPTHIFNLFGLLPFDPSAVPLIGTYLAIGAWPVIMGITMWFQMKLNP 539 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D Q MI +WMPVVF F L+SFPAGL+IYW+W+N++S++QQ+ IMK +G +I L D Sbjct: 540 QPPDPTQKMIFDWMPVVFTFMLASFPAGLVIYWAWNNLLSVLQQSAIMKKNGVKIELFDN 599 Query: 570 LRSTFS 575 L+S F+ Sbjct: 600 LKSMFA 605 >gi|240850503|ref|YP_002971902.1| preprotein translocase subunit YidC [Bartonella grahamii as4aup] gi|240267626|gb|ACS51214.1| preprotein translocase subunit YidC [Bartonella grahamii as4aup] Length = 612 Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust. Identities = 265/607 (43%), Positives = 378/607 (62%), Gaps = 32/607 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N N+F+AI LS +++ AWQ +V P+ ++ ++ Q + + ++ DD Sbjct: 1 MEYNRNFFIAIGLSFVVLIAWQFLHVAPKQAKLQKQQVITQQLSKQQSTLSTTTTNFSDD 60 Query: 61 ------------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 R L+ + R+ +K L GSINL GAQFDDL+L+ Y L V Sbjct: 61 TSTHQATSIIEQPMTPEIRKAVLAKTKRIAIKTNELEGSINLVGAQFDDLHLKKYRLTVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGK-ILTPTTPIKLVF 160 SP + LL+P K Y AE + S + + LP S+T W + ILTP+TPI L++ Sbjct: 121 KKSPEIDLLNPKGFKTTYLAEFGFASASLPAKALPQSDTQWQIEGNNTILTPSTPITLIY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 N +F R +S+D+H++F I D+++N S I S R+ R P TN T+ + EG Sbjct: 181 NNGQGQIFRRILSVDDHFMFTIEDSISNESDQPIYLSSYARVARAAPPEHTNATYLLHEG 240 Query: 220 FIAVLGDKSLVEQKYS---------DIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 I + GD SL +KY D + S++ + W+GI+DKYWA IP + Sbjct: 241 MIGIAGD-SLKTEKYKTLAELDPNPDNGQKSMTFSKVTGGWIGITDKYWAVAVIPPQNKE 299 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + S+F Y YQ+ + +TI P ++ T TN LFAGAK+ I++Y+ DL I +F Sbjct: 300 YTSRFIYFDRLQTHYQSDLLGSLLTIAPNETKTITNRLFAGAKQVEIINNYQNDLKIKKF 359 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +LIDWGWF FI KPMF L+ Y GNFGIAI+L TV +K L FPLA K Y S A MK Sbjct: 360 ALLIDWGWFDFITKPMFSLIDVLYKQTGNFGIAILLVTVLLKTLLFPLANKSYKSMARMK 419 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QP++ E++EK+ + Q+A+I+LYKT INPLAGCWP+L+Q P+FFA+YKV+ I+ Sbjct: 420 LLQPRLLEIKEKYPDDKTKQ-QQAIIELYKTEKINPLAGCWPMLVQFPIFFALYKVLYIT 478 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWIKDLAA DPT++F LFG+LP+ P F+ +G WP+IM ++MF+QM+M+P Sbjct: 479 IEMRHAPFFGWIKDLAAPDPTSLFNLFGLLPYTTPTFLMIGAWPLIMGITMFLQMRMNPA 538 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D+ QAMI WMPVVF F L+SFP GL+IYW+W+N++SI+QQ ++MK G +I L D L Sbjct: 539 PQDQSQAMIFTWMPVVFTFMLASFPVGLVIYWAWNNILSIIQQGIMMKRQGVKIELFDNL 598 Query: 571 RSTFSKN 577 ++ + K+ Sbjct: 599 KTMWRKS 605 >gi|220925223|ref|YP_002500525.1| YidC translocase/secretase [Methylobacterium nodulans ORS 2060] gi|254773002|sp|B8IMM9|OXAA_METNO RecName: Full=Inner membrane protein oxaA gi|219949830|gb|ACL60222.1| YidC translocase/secretase [Methylobacterium nodulans ORS 2060] Length = 605 Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust. Identities = 248/598 (41%), Positives = 366/598 (61%), Gaps = 33/598 (5%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD--------------- 50 N +AIALS+ ++ W F P++E ++ P + Sbjct: 7 NMIIAIALSLAVLLGWNYFVAAPQVERQRQQQAQTSASPSPKEGGPSAPVPGTLPGASGG 66 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 N AA+ R +AL+ SPRV + +L GS+ LKG + DD+ L+GYH V SP + L Sbjct: 67 NPQAAL---TREEALARSPRVRIDTEALKGSVALKGGRIDDVALKGYHETVDPKSPEIVL 123 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 LSP+ + N Y+AE +V LPN +TVW G +LT P+ L + N ++F R Sbjct: 124 LSPAGSANPYYAEFGWVGQGAG-PLPNGDTVWT-ADGDLLTAKKPLTLTWDNGAGLVFRR 181 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAVLGDKSL 229 T+S+D+ Y+F + D+V N + P G + R KP T + + EG I VLGDK L Sbjct: 182 TLSVDDKYMFTVEDSVENKGQSAVTLYPYGLVSRWGKPHT-QGYYVLHEGLIGVLGDKGL 240 Query: 230 VEQKYSDIEKS---------SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 E Y + K +S + +LGI+DKYWA+ IP ++T + F + Sbjct: 241 QEYTYDKMAKENPLGSPGTRGLSWPGVTGGFLGITDKYWAAATIPDQKTPYTGSFTERDE 300 Query: 281 GHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G + YQ T+ PG + + LFAGAKE TI Y + L I +F+++IDWGWF Sbjct: 301 GATKVYQTSSLGEARTLAPGAGVQASQHLFAGAKEVSTIDAYRQKLDIKQFDLMIDWGWF 360 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YFI KPMF + +FY L GNFG++I++ T+ +KL F P+A + YVS A MK +QP++ + Sbjct: 361 YFITKPMFKALDFFYKLFGNFGVSILVVTLILKLFFLPIANRSYVSMAKMKAVQPEMTAI 420 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE++ + Q+AM++LY+ INP+AGCWP+++QIPVFFA+YKV+ +++EMRHAPF+ Sbjct: 421 RERYADDKVK-QQQAMMELYRKEKINPVAGCWPVVIQIPVFFALYKVLFVTIEMRHAPFF 479 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 GWI+DLAA DPT++ LFG+LPF P +H+G+WPI+M ++MF+QMKM+P P D QA + Sbjct: 480 GWIRDLAAPDPTSVLNLFGLLPFAAPDLVHLGVWPIVMGITMFLQMKMNPAPPDPVQAQV 539 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +MP++F F L SFPAGL+IYW+W+N++SI+QQ IM+ +G ++ L D LR+TFS++ Sbjct: 540 FTFMPIIFTFMLGSFPAGLVIYWAWNNLLSILQQYWIMRRNGVKVELWDNLRTTFSRS 597 >gi|163851774|ref|YP_001639817.1| 60 kDa inner membrane insertion protein [Methylobacterium extorquens PA1] gi|254773001|sp|A9W590|OXAA_METEP RecName: Full=Inner membrane protein oxaA gi|163663379|gb|ABY30746.1| 60 kDa inner membrane insertion protein [Methylobacterium extorquens PA1] Length = 616 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 258/610 (42%), Positives = 372/610 (60%), Gaps = 40/610 (6%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK--QPNQVDN------------ 51 N FVAIALS++++ W F P E ++ QT + P D Sbjct: 7 NMFVAIALSLVVLLGWHYFVTGPASERQRQAAQS-QTAQTGAPQTADGIPSPSPREGGPN 65 Query: 52 --------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 AA R AL+ S RV + P+L GSI LKGA+ DD++L+ YH VS Sbjct: 66 APAPGTLPGAAAQGPVSREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHETVSD 125 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 SP + LLSP+ T N Y+AE +V AN LPN++T+W G +L P P+ L + N Sbjct: 126 ESPRIVLLSPTGTANPYYAEFGWVG-ANAGPLPNADTLWK-ADGDLLAPGRPLTLTWDNG 183 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIA 222 ++F+R +++D+ ++F + D V N S + + P + R KPQT + + EG I Sbjct: 184 QGLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQT-QGYYVLHEGLIG 242 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHE---------SNSWLGISDKYWASVFIPSKETSFHS 273 VLG L E Y + K + W+GI+DKYWA+ IP ++ F Sbjct: 243 VLGGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKPFTG 302 Query: 274 QFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 F +DG + YQ + +T+ P S TT LFAGAKE I+ YE++ I +F++ Sbjct: 303 AFTERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNQINAYEREFGIKQFDL 362 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +IDWGWF+F+ KPMF + +F++L+GNFG++I+L T+ +KL F P+A + YVS A MK + Sbjct: 363 MIDWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKMKAV 422 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP++ +RE++K + Q+AM++LYK INP+AGCWP+L+QIPVFFA+YKV+ I++E Sbjct: 423 QPEMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFITIE 481 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSPP 510 MRHAPF+GWI+DLAA DPT+I LFG+LPF P + +H+G+WPIIM ++MFIQMKM+P Sbjct: 482 MRHAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKMNPA 541 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QA + +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D L Sbjct: 542 PPDPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWDNL 601 Query: 571 RSTFSKNYNS 580 R F + S Sbjct: 602 RGMFKRGNKS 611 >gi|121602508|ref|YP_989323.1| putative inner membrane protein translocase component YidC [Bartonella bacilliformis KC583] gi|120614685|gb|ABM45286.1| inner membrane protein, 60Kd [Bartonella bacilliformis KC583] Length = 612 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 268/606 (44%), Positives = 382/606 (63%), Gaps = 32/606 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA----- 55 ME N N+F+AI LS+II AW Y+ P+ E + N + Q + N +Y A Sbjct: 1 MEYNRNFFIAIGLSLIIFVAWHFLYIVPQHENLKNAQTIEQQALKQNPASPTYDADFSNN 60 Query: 56 ------VLIDDRAQA-------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 L DR+ L+ + R+ +K L GSINL GAQFDDL L+ YHL V Sbjct: 61 AQTNQSRLTADRSMTPEIRRAELAKTDRITIKTDELEGSINLVGAQFDDLFLKKYHLTVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLIS-GKILTPTTPIKLVF 160 SP ++LL+P+ K +Y AE + S++ LP SNT W + S ILTP+TP+ LV+ Sbjct: 121 KTSPQISLLNPNGFKTSYLAEFGFTSSSLPEKALPQSNTQWQIESENTILTPSTPVTLVY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP-QTATNTFGVQEG 219 N +F RTIS+D+HY+F I D++ N S + + S R+ R P + A T+ + EG Sbjct: 181 NNGQGQIFRRTISIDDHYMFTIEDSINNESDNPVHLSSYARVARAAPPEHAQATYLLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEKSSIS--------NFHE-SNSWLGISDKYWASVFIPSKETS 270 I + G+ SL + Y + + +++ F + + W+GI+DKYWA IPS+ Sbjct: 241 MIGIAGN-SLKTETYEALSELTLNPEDGQKSLTFQKVTGGWIGITDKYWAVAVIPSQNQE 299 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + S+F Y + YQ+ + ++I P ++ T N+LFAGAK I+ Y+ L I +F Sbjct: 300 YTSRFVYFDRLNTHYQSDLQSALLSIAPRETKTIINYLFAGAKRVEIINQYQNQLQIKKF 359 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +LIDWGWF FI KPMF L+ Y GNFGIAI+LTTV +K L FPLA K Y+S A MK Sbjct: 360 GLLIDWGWFDFITKPMFSLIHILYEQTGNFGIAILLTTVLLKTLLFPLANKSYISMARMK 419 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 IQP + E++EK+ + + Q A+IQLYKT INPLAGC P+L+Q P+FFA+YKV+ I+ Sbjct: 420 IIQPMMQEIKEKYAEDRVKQ-QHAIIQLYKTQKINPLAGCLPMLIQFPIFFALYKVLYIT 478 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 LEMRHAPF+GWI+DLAA DPT+IF LFG LP+ +P F +G WP++M ++MF+QM+M+PP Sbjct: 479 LEMRHAPFFGWIQDLAAPDPTSIFNLFGFLPYAVPAFFVIGAWPLVMGITMFLQMQMNPP 538 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QA + W+P++F F L+SFPAGL+IYW+W+N +SI+QQ++IMK G +I L + + Sbjct: 539 PVDPIQATLFAWLPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSIIMKRQGVKIELFNNI 598 Query: 571 RSTFSK 576 ++ + K Sbjct: 599 KTIWQK 604 >gi|49475954|ref|YP_033995.1| putative inner membrane protein translocase component YidC [Bartonella henselae str. Houston-1] gi|49238762|emb|CAF28023.1| hypothetical protein BH12410 [Bartonella henselae str. Houston-1] Length = 612 Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust. Identities = 269/607 (44%), Positives = 382/607 (62%), Gaps = 32/607 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYA----- 54 ME N N+F+AI LS ++ AW FYV P+ E+ ++ Q + KQ + V + A Sbjct: 1 MEYNRNFFIAIGLSFGVLIAWHFFYVAPKQTELQQKQLIAQQLLKQQSAVSSPTANFSDS 60 Query: 55 ------AVLIDD------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 A++I+ R L+ + RV +K L GSINL GAQFDDL L+ Y L V Sbjct: 61 ASTHESALIINHPMSPEIRDAELAKTNRVAIKTNELEGSINLVGAQFDDLLLKKYRLTVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKI-LTPTTPIKLVF 160 S + LL+P K Y AE + S++ + LP S+T W++ LTP+TP+ L++ Sbjct: 121 KKSSEIALLNPKGFKETYLAEFGFTSSSLSKDALPQSDTRWHIEGNNTTLTPSTPVTLIY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 N F R +S+D+HY+F I D++TN S I S R+ R P TN T+ + EG Sbjct: 181 NNGQGQTFRRILSIDDHYMFTIEDSITNESDKPIYLSSYARVARAAPPEHTNATYLLHEG 240 Query: 220 FIAVLGDKSLVEQKYS---------DIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 I + GD SL +KY D + S++ W+GI+DKYWA IP ++ Sbjct: 241 MIGIAGD-SLKTEKYKTLAELNPNPDNGQKSMTFSKVIGGWVGITDKYWAVAVIPPQDKE 299 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + S+F Y YQ+ + +T+ P ++ T TN LFAGAK+ I+HY+ DL I +F Sbjct: 300 YTSRFIYFDRLQTHYQSDLLGSLLTVAPNETKTITNRLFAGAKQVEIINHYQNDLKIKKF 359 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +LIDWGWF FI KPMF L+ Y GNFGIAI+L TV +K L FPLA K Y S A MK Sbjct: 360 ALLIDWGWFDFITKPMFSLIDILYKQTGNFGIAILLVTVLLKTLLFPLANKSYKSMARMK 419 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 IQP + E++EK+ + + Q+A+I+LYKT INPLAGCWP+L+Q P+FFA+YKV+ I+ Sbjct: 420 LIQPMLLEIKEKYPEDRTKQ-QQAIIELYKTQKINPLAGCWPMLVQFPIFFALYKVLYIT 478 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT++F LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P Sbjct: 479 IEMRHAPFFGWIQDLAAPDPTSLFNLFGLLPYTVPAFLMLGAWPLIMGITMFLQMRMNPA 538 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D+ QAMI WMP+VF F L+SFP GL+IYW+W+N++S++QQ ++MK G +I L D L Sbjct: 539 PQDQTQAMIFAWMPIVFTFMLASFPVGLVIYWAWNNILSMIQQGIMMKRQGVKIELFDNL 598 Query: 571 RSTFSKN 577 ++ + K+ Sbjct: 599 KAMWRKS 605 >gi|240138939|ref|YP_002963414.1| transmembrane protein, OxaA-like, preprotein translocase component [Methylobacterium extorquens AM1] gi|240008911|gb|ACS40137.1| transmembrane protein, OxaA-like, preprotein translocase component [Methylobacterium extorquens AM1] Length = 637 Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust. Identities = 256/609 (42%), Positives = 374/609 (61%), Gaps = 38/609 (6%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNN--ERKNIQT--------VKQPNQVDNS--- 52 N FVAIALS++++ W F P E + + QT + P+ + S Sbjct: 28 NMFVAIALSLVVLLGWHYFVTGPASERQRQAAQSQTAQTGAPQTADGIPSPSPREGSPNA 87 Query: 53 --------YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A+ R AL+ S RV + P+L GSI LKGA+ DD++L+ YH VS Sbjct: 88 PAPGTLPGAGALGPVSREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHETVSDE 147 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SP + LLSP+ + N Y+AE +V AN LPN++T+W G +L P P+ L + N Sbjct: 148 SPRIVLLSPTGSANPYYAEFGWVG-ANAGPLPNADTLWK-ADGDLLAPGRPLTLTWDNGQ 205 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAV 223 ++F+R +++D+ ++F + D V N S + + P + R KPQT + + EG I V Sbjct: 206 GLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQT-QGYYVLHEGLIGV 264 Query: 224 LGDKSLVEQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQ 274 LG L E Y + K + W+GI+DKYWA+ IP ++ F Sbjct: 265 LGGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKPFTGA 324 Query: 275 FKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 F +DG + YQ + +T+ P S TT LFAGAKE I+ YE++ I +F+++ Sbjct: 325 FTERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNQINAYEREFGIKQFDLM 384 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 IDWGWF+F+ KPMF + +F++L+GNFG++I+L T+ +KL F P+A + YVS A MK +Q Sbjct: 385 IDWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKMKAVQ 444 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ +RE++K + Q+AM++LYK INP+AGCWP+L+QIPVFFA+YKV+ I++EM Sbjct: 445 PEMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFITIEM 503 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSPPP 511 RHAPF+GWI+DLAA DPT+I LFG+LPF P + +H+G+WPIIM ++MFIQMKM+P P Sbjct: 504 RHAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKMNPAP 563 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D QA + +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D LR Sbjct: 564 PDPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWDNLR 623 Query: 572 STFSKNYNS 580 F + S Sbjct: 624 GMFKRGNKS 632 >gi|254561547|ref|YP_003068642.1| transmembrane protein, OxaA-like, preprotein translocase component [Methylobacterium extorquens DM4] gi|254268825|emb|CAX24786.1| transmembrane protein, OxaA-like, preprotein translocase component [Methylobacterium extorquens DM4] Length = 637 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 257/609 (42%), Positives = 374/609 (61%), Gaps = 38/609 (6%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNN--ERKNIQT--------VKQPNQVDNS--- 52 N FVAIALS++++ W F P E + + QT + P+ + S Sbjct: 28 NMFVAIALSLVVLLGWHYFVTGPASERQRQAAQSQTAQTGAPQTADGIPSPSPREGSPNA 87 Query: 53 --------YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 AA R AL+ S RV + P+L GSI LKGA+ DD++L+ YH VS Sbjct: 88 PAPGTLPGAAAQGPVSREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHETVSDE 147 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SP + LLSP+ + N Y+AE +V AN LPN++T+W G +L P P+ L + N Sbjct: 148 SPRIVLLSPTGSANPYYAEFGWVG-ANAGPLPNADTLWK-ADGDLLAPGRPLTLTWDNGQ 205 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAV 223 ++F+R +++D+ ++F + D V N S + + P + R KPQT + + EG I V Sbjct: 206 GLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQT-QGYYVLHEGLIGV 264 Query: 224 LGDKSLVEQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQ 274 LG L E Y + K + W+GI+DKYWA+ IP ++ F Sbjct: 265 LGGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKPFTGA 324 Query: 275 FKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 F +DG + YQ + +T+ P S TT LFAGAKE I+ YE++ I +F+++ Sbjct: 325 FTERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNQINAYEREFGIKQFDLM 384 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 IDWGWF+F+ KPMF + +F++L+GNFG++I+L T+ +KL F P+A + YVS A MK +Q Sbjct: 385 IDWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKMKAVQ 444 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ +RE++K + Q+AM++LYK INP+AGCWP+L+QIPVFFA+YKV+ I++EM Sbjct: 445 PEMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFITIEM 503 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSPPP 511 RHAPF+GWI+DLAA DPT+I LFG+LPF P + +H+G+WPIIM ++MFIQMKM+P P Sbjct: 504 RHAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKMNPAP 563 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D QA + +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D LR Sbjct: 564 PDPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWDNLR 623 Query: 572 STFSKNYNS 580 F + S Sbjct: 624 GMFKRGNKS 632 >gi|218530582|ref|YP_002421398.1| YidC translocase/secretase [Methylobacterium chloromethanicum CM4] gi|254773000|sp|B7L2I5|OXAA_METC4 RecName: Full=Inner membrane protein oxaA gi|218522885|gb|ACK83470.1| YidC translocase/secretase [Methylobacterium chloromethanicum CM4] Length = 616 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 254/610 (41%), Positives = 371/610 (60%), Gaps = 40/610 (6%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMN----------------------NERKNIQTV 43 N FVAIALS++++ W F P E + R+ Sbjct: 7 NMFVAIALSLVVLLGWHYFVTGPASERQRQAAQSQAAQTGAPQTADGIPSPSPREGSPNA 66 Query: 44 KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 P + + A + R AL+ S RV + P+L GSI LKGA+ DD++L+ YH VS Sbjct: 67 PAPGTLPGAAAQGPV-SREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHETVSD 125 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 SP + LLSP+ + N Y+AE +V AN LPN++T+W G +L P P+ L + N Sbjct: 126 ESPRIVLLSPTGSANPYYAEFGWVG-ANAGPLPNADTLWK-ADGDLLAPGRPLTLTWDNG 183 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIA 222 ++F+R +++D+ ++F + D V N S + + P + R KPQT + + EG I Sbjct: 184 QGLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQT-QGYYVLHEGLIG 242 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHE---------SNSWLGISDKYWASVFIPSKETSFHS 273 VLG L E Y + K + W+GI+DKYWA+ IP ++ F Sbjct: 243 VLGGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKPFTG 302 Query: 274 QFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 F +DG + YQ + +T+ P S TT LFAGAKE I+ YE++ I +F++ Sbjct: 303 AFTERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNRINAYEREFGIKQFDL 362 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +IDWGWF+F+ KPMF + +F++L+GNFG++I+L T+ +KL F P+A + YVS A MK + Sbjct: 363 MIDWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKMKAV 422 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP++ +RE++K + Q+AM++LYK INP+AGCWP+L+QIPVFFA+YKV+ I++E Sbjct: 423 QPEMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFITIE 481 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSPP 510 MRHAPF+GWI+DLAA DPT+I LFG+LPF P + +H+G+WPIIM ++MFIQMKM+P Sbjct: 482 MRHAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKMNPA 541 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QA + +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D L Sbjct: 542 PPDPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWDNL 601 Query: 571 RSTFSKNYNS 580 R F + S Sbjct: 602 RGMFKRGNKS 611 >gi|49474531|ref|YP_032573.1| putative inner membrane protein translocase component YidC [Bartonella quintana str. Toulouse] gi|49240035|emb|CAF26454.1| hypothetical protein BQ09780 [Bartonella quintana str. Toulouse] Length = 613 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 264/608 (43%), Positives = 377/608 (62%), Gaps = 33/608 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N N+F+AI LS ++ AW FYV P+ ++ +R Q + + ++ D+ Sbjct: 1 MEYNRNFFIAIGLSFGVLIAWHFFYVAPKQAQLQQKRLIAQQLSKQQSTLSTSTPYFSDN 60 Query: 61 -------------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 R +AL+ + R+ +K L GSINL GAQFDDL L+ Y L V Sbjct: 61 ASITHESASIITHPITPEIRNEALAKTNRIAIKTDELEGSINLVGAQFDDLLLKKYRLTV 120 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKI-LTPTTPIKLV 159 SP + LL+P Y AE + S++ + + LP S+T W + LTP+TP+ L+ Sbjct: 121 DKKSPEIALLNPKGFTTTYLAEFGFTSSSLSAKALPQSDTQWQIEGNNTTLTPSTPVTLI 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQE 218 + N +F RT+S+D HY+F I D++ N S I S R+ R P TN T+ + E Sbjct: 181 YNNGQGQIFRRTLSVDNHYMFTIEDSIKNESDKPIYLSSYARVARAAPPEHTNATYLLHE 240 Query: 219 GFIAVLGDKSLVEQKYS---------DIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 G I + D SL +KY D + SI+ W+GI+DKYWA IP ++ Sbjct: 241 GMIGIASD-SLKTEKYKTLAELNPNPDNSQKSITFSKNIGGWIGITDKYWAVAVIPPQDK 299 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + S+F Y + YQ+ + +T+ P ++ TN LFAGAK+ I+HY+ DL I + Sbjct: 300 EYTSRFIYFDRLNTHYQSDLLGSLLTVAPNETKIVTNRLFAGAKQVEIINHYQNDLKIKK 359 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F +LIDWGWF FI KPMF L+ Y GNFGIAI+L TV +K L FPLA K Y S A M Sbjct: 360 FALLIDWGWFDFITKPMFSLIDTLYKQTGNFGIAILLVTVLLKTLLFPLANKSYKSMARM 419 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K IQP + E++EK+ + Q+A+I+LYKT INPLAGCWP+L+Q P+FFA+YKV+ I Sbjct: 420 KLIQPMLLEIKEKYPDDRTKQ-QQAIIELYKTQKINPLAGCWPMLIQFPIFFALYKVLYI 478 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 ++EMRHAPF+GWI+DLAA DPT++F LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P Sbjct: 479 TIEMRHAPFFGWIQDLAAPDPTSLFNLFGLLPYTVPTFLMLGAWPLIMGITMFLQMRMNP 538 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D+ QAMI WMPV+F F L+SFP GL+IYW+W+N++SI+QQ+++MK G +I L D Sbjct: 539 APQDQTQAMIFAWMPVIFTFMLASFPVGLVIYWAWNNILSILQQSILMKRQGVKIELFDN 598 Query: 570 LRSTFSKN 577 L++ + K+ Sbjct: 599 LKAMWWKS 606 >gi|217977385|ref|YP_002361532.1| 60 kDa inner membrane insertion protein [Methylocella silvestris BL2] gi|254773006|sp|B8EPG5|OXAA_METSB RecName: Full=Inner membrane protein oxaA gi|217502761|gb|ACK50170.1| 60 kDa inner membrane insertion protein [Methylocella silvestris BL2] Length = 600 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 253/596 (42%), Positives = 357/596 (59%), Gaps = 23/596 (3%) Query: 6 NYFVAIALSVIIVYAWQNFYV---YPRIEEMNNERKNIQTVKQPNQVDNSYAAV------ 56 N ++AI LS +++ W + R + +N QP A Sbjct: 7 NLYLAIGLSCLVIVGWSYIFAPKQADRARLAQTQSQNAPAGTQPQSAATPQDAANFSPLD 66 Query: 57 -LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 L RA+AL+ SPR+++ P++ GS++LKGA+ DD++L+GY V NSP + LLSP Sbjct: 67 ALPKTRAEALAASPRLKIDTPAIFGSLSLKGARLDDVSLKGYRETVDPNSPNIVLLSPQG 126 Query: 116 TKNAYFAELDYV-STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 +AY+AE +V + + +P S+TVW LTP P+ L + N ++F R I++ Sbjct: 127 APDAYYAEAGFVPAPGEAVAVPRSDTVWT-ADRDALTPEAPVTLTYDNGQGLVFHRQIAV 185 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 D+ ++F I D+V N S + + + RH N + EGF+ V+GD + E Y Sbjct: 186 DDRFMFTIKDSVENKSAKPVTLASYALVARHGLPKTVNYAVLHEGFVGVIGDAGVQEFHY 245 Query: 235 SDIEKS--SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS--DGHARYQAKFS 290 IEK F + WLG +DKYWA+ IP + ++F S G Y+A F Sbjct: 246 DKIEKEDHGYKTFSGAGGWLGFTDKYWAATVIPDQAAPIEARFSANSTPSGIKTYRADFV 305 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 TI PG + + +FAGAKE T+ Y+ DL I +FE+LIDWGWFYFI +PMF L+ Sbjct: 306 GPVQTIAPGATTEAMSRVFAGAKEVHTLDAYQADLGIKKFELLIDWGWFYFITRPMFRLL 365 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + Y+L GNFG+AI+L TV VK LFFPLA K Y+S A MK + P+I LREK+ + + Sbjct: 366 HFLYSLTGNFGVAILLATVIVKGLFFPLANKSYLSMAKMKAVAPEIAALREKYPEDKMKQ 425 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 Q+ M LYK INP++GC P+L+QIPVFFA+YKV+ +++EMRHAPF+GWI DL+A DP Sbjct: 426 QQETM-ALYKREKINPVSGCLPMLIQIPVFFALYKVLFVTIEMRHAPFFGWIHDLSAPDP 484 Query: 471 TNIFTLFGILPF---YLP---GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 TN+F LFG+LPF LP F+ +G+WP++M +SMF+QMK +P PAD Q I WMP Sbjct: 485 TNLFNLFGLLPFDPTQLPLIGHFLAIGVWPLLMGVSMFVQMKANPEPADPMQKQIFTWMP 544 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 V+F F L FP GL+IYW+W+N++S+ QQ +IMK G ++ L D L S F K S Sbjct: 545 VIFTFTLGGFPVGLVIYWTWNNILSVSQQTLIMKRAGVKVELFDNLASLFRKKVTS 600 >gi|328545250|ref|YP_004305359.1| transmembrane protein, OxaA-like, preprotein translocase component [polymorphum gilvum SL003B-26A1] gi|326414992|gb|ADZ72055.1| Transmembrane protein, OxaA-like, preprotein translocase component [Polymorphum gilvum SL003B-26A1] Length = 607 Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust. Identities = 265/602 (44%), Positives = 375/602 (62%), Gaps = 28/602 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41 M N N F+AIALS++++ WQ F P++E E Sbjct: 1 MADNRNTFLAIALSLVVLLGWQYFVARPQLERQQAELAQQDAQQQAAGQDAQAPTPGATA 60 Query: 42 --TVKQPNQVDNSYAAVLID-DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 ++ P + A + R AL S RV ++ P + GSINL GA+ DDL L+ Y Sbjct: 61 PGSLPAPGSTAPAAGAQPVALTREAALGTSARVTIETPRVSGSINLAGARIDDLRLKDYR 120 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIK 157 V SP + L SP Y+A+ +V+ + LP +++W++ LTP TP+ Sbjct: 121 ETVDPKSPTIVLFSPKGGPKPYYADFGWVTDGTKTVALPGPDSLWSVEGSDRLTPQTPVT 180 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGV 216 L F N ++F+RT ++DE+Y+F + V N + + IR P G I+R KP+TA + + Sbjct: 181 LTFDNGEGLVFKRTFTIDENYMFSVSQEVVNGTQEAIRLFPYGLIVRRGKPETA-GFYIL 239 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 EG I V G+K L E YSD+E+ I + WLGI+DKYWA+ IP +SF F Sbjct: 240 HEGLIGVFGEKGLQEVDYSDVEEDGQIRPGQVDSGWLGITDKYWAATLIPMPGSSFQPSF 299 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 Y + +QA F + + G S + +++LFAGAKE I YE+ L I RFE+LID Sbjct: 300 GYTATTD-NFQADFLGAAVDVASGASGSASSYLFAGAKETKVIDAYEEALNIARFELLID 358 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWFYF+ KPMF ++ + ++LVGNFGIAI+L TV VKL+FFPLA K YVS + MK +QP+ Sbjct: 359 WGWFYFLTKPMFFVIDWLFHLVGNFGIAILLVTVLVKLVFFPLANKSYVSMSKMKLVQPQ 418 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + E+R+++K + Q+A+++LYK INPLAGC PIL+QIPVFFA+YKV+ +++EMRH Sbjct: 419 MTEIRDRYKDDKAK-QQQALMELYKKEKINPLAGCLPILIQIPVFFALYKVLFVTIEMRH 477 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 APF+GWI+DL+A DPT IF LFG++P+ P + +GIWP+IM ++MF+QMKM+P P D Sbjct: 478 APFFGWIQDLSAPDPTTIFNLFGLIPWDPPQMLMLGIWPLIMGVTMFVQMKMNPAPPDPT 537 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 Q MI WMPV+F F L+SFPAGL+IYW+W+N +SI QQ VIM+ GA++ L D L+ TF Sbjct: 538 QQMIFTWMPVIFTFMLASFPAGLVIYWAWNNSLSIAQQYVIMRRQGAKVELWDNLKITFK 597 Query: 576 KN 577 + Sbjct: 598 RK 599 >gi|182680230|ref|YP_001834376.1| 60 kDa inner membrane insertion protein [Beijerinckia indica subsp. indica ATCC 9039] gi|254772748|sp|B2IDV5|OXAA_BEII9 RecName: Full=Inner membrane protein oxaA gi|182636113|gb|ACB96887.1| 60 kDa inner membrane insertion protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 604 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 251/598 (41%), Positives = 374/598 (62%), Gaps = 29/598 (4%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID------ 59 N ++AI LS++++ W F+ P++E+ + + Q ++ A ++ Sbjct: 7 NLYLAIGLSLLVLIGWNYFFAGPQVEKARQAQIVREQQAQTQTTSDTTARSDLNVPGQRS 66 Query: 60 ----------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 R +AL+ SPRV+L P+L GSINL+GA+ DD++L+ Y V+ +SP + Sbjct: 67 LPGESPQTQLSRPEALAASPRVKLDTPNLFGSINLRGARIDDVSLKAYRETVAKDSPNIV 126 Query: 110 LLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 LLSPS T Y+A+ +V+ A + LP S+T+W+ ++LTP P+ L + N ++F Sbjct: 127 LLSPSGTPAPYYADAGFVAPAEAGLLLPKSDTLWS-ADREVLTPEAPVTLTYDNGQGLIF 185 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDK 227 RTIS+D+ ++F + D V N + + P + RH +P TA + EG + V+GD Sbjct: 186 HRTISVDDRFMFTLTDKVENKTDKPVTLYPYSLVSRHGRPVTAGYAV-LHEGMVGVIGDN 244 Query: 228 SLVEQKYSDI--EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 L E Y I E+++ +F + WLG +DKYWA+V P + T F +F Y Sbjct: 245 GLQEITYDKIHKEENATKSFKGTGGWLGFTDKYWAAVIAPDQATPFEGRFSERGTTTPLY 304 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 Q +TI PG + + LFAGAKE T+ Y +L I +F++LIDWG+FYFI +P Sbjct: 305 QTDALGPALTIAPGGTGGDMSRLFAGAKETQTLDDYRNELGIKKFDLLIDWGYFYFITRP 364 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 MF ++ Y +VGNFG+AI+ TV VK +FFPLA + Y+S A MK IQP++ LRE++ Sbjct: 365 MFWILHTIYQVVGNFGVAILCITVLVKAVFFPLANRSYLSMAKMKAIQPQMLALRERYAD 424 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + Q+ +++LYK INP+AGC P+L+QIPVFFA+YKV+ +++EMR APF+GWI+DL Sbjct: 425 DKVKQ-QQELMELYKREKINPVAGCLPMLIQIPVFFALYKVLFVTIEMRQAPFFGWIRDL 483 Query: 466 AAADPTNIFTLFGILPF---YLP---GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 +A DPTNIF LFG+LPF +LP F+ +GIWP+IM +SMF QMKM+P PAD Q + Sbjct: 484 SAPDPTNIFNLFGLLPFDPTHLPMIGHFLAIGIWPLIMGVSMFFQMKMNPEPADPVQKQM 543 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +WMPV+F F L +FP+GL+IYW+W+N +S++QQ++IMK G ++ L D L STF K Sbjct: 544 FSWMPVIFTFMLGTFPSGLVIYWTWNNTLSVLQQSLIMKRAGVKVELWDNLMSTFRKK 601 >gi|75677253|ref|YP_319674.1| putative inner membrane protein translocase component YidC [Nitrobacter winogradskyi Nb-255] gi|74422123|gb|ABA06322.1| protein translocase subunit yidC [Nitrobacter winogradskyi Nb-255] Length = 614 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 250/610 (40%), Positives = 372/610 (60%), Gaps = 30/610 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE----------EMNNERKNIQTVKQPNQV- 49 M N N +AI LS +++ AWQ FY P++E E+ + Q PN Sbjct: 1 MSENRNTIIAIVLSALVLIAWQYFYNIPQMEKDRAAHQAQSELAKSQSKSQGEAAPNTAA 60 Query: 50 -DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 S A + R A++ PRV++ P L GSI+L GA+ DDL L Y V+ SP + Sbjct: 61 PGQSAAGSAVVARDVAIASKPRVQINTPRLSGSISLTGARIDDLLLTKYRETVNPASPAI 120 Query: 109 TLLSPSNTKNAYFAELDYV-STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 L SPS T + Y+AE +V T + + +P+ +T+W LTP+TP+ L + N + Sbjct: 121 ELFSPSGTASPYYAEFGWVPGTGSTVRVPDRSTLWQQEGAGALTPSTPVTLKYDNGEGLT 180 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 F RT+S+D+ YLF I D VTN + P I RH + + + EG I LGD+ Sbjct: 181 FRRTVSVDDQYLFTIKDEVTNTGSAPVTLYPFALISRHGTPEISGYYILHEGLIGYLGDQ 240 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQ 286 L E Y +I+++ F+ +N WLGI+DKYWA+ +P ++F G R YQ Sbjct: 241 KLQEYSYKNIDEAGSVTFNVTNGWLGITDKYWAAALLPDTSARLQARFSSDQAGAVRTYQ 300 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKE-------FP--TIHHYEKDLAIPRFEMLIDWG 337 + + TI G + + LFAGAKE FP + Y K L + F++LIDWG Sbjct: 301 TDYLEDARTIPAGGTGAVSTRLFAGAKEAGVVGLNFPLAELGGYNKQLGLNHFDLLIDWG 360 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WFYFI KPMF+ + +F+++ GNFG++I++ TV +KL+FFPLA + Y S A MK IQP+I+ Sbjct: 361 WFYFITKPMFLALDFFFHVFGNFGVSILVVTVLIKLVFFPLANRSYASMAKMKAIQPQIN 420 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 LRE + + LQ+ M+++YK INP++GC P+LLQIPVFF++YKV+ +++EMRHAP Sbjct: 421 ALRELYPDDRMK-LQQEMMEIYKKEKINPISGCLPVLLQIPVFFSLYKVLFVTIEMRHAP 479 Query: 458 FWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 F+ WIKDL+A DPT+IF LFG+LP+ + ++ +G WPIIM ++M+ QMK++P P Sbjct: 480 FFAWIKDLSAPDPTHIFNLFGLLPYDPSVVPLIGPYLAIGAWPIIMGVTMWFQMKLNPTP 539 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D Q +I +WMPV+F F L++FPAGL+IYW+W+N +S++QQ+ IM+ +G ++ L D ++ Sbjct: 540 PDPTQKIIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVIQQSYIMRRNGVKVELFDNVK 599 Query: 572 STFSKNYNSQ 581 STF + + + Sbjct: 600 STFRRKSSDK 609 >gi|146337896|ref|YP_001202944.1| putative inner membrane protein translocase component YidC [Bradyrhizobium sp. ORS278] gi|146190702|emb|CAL74706.1| Inner membrane protein oxaA [Bradyrhizobium sp. ORS278] Length = 622 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 264/620 (42%), Positives = 374/620 (60%), Gaps = 45/620 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE------EMNNERKNIQ------------T 42 M N N +A+ LS +++ WQ FY P++E ++ +E Q Sbjct: 1 MTDNRNTILAVILSGLVLILWQVFYNGPQMEKQRAQAQLQSELAKKQGPATQPDGTAPSA 60 Query: 43 VKQPNQVDN---------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 QPN + + A + R A++ +PRV++ P L GSI+LKGA+ DDL Sbjct: 61 TPQPNAAASGSPSAPGGAATTATGVVPRETAIAANPRVKIDTPRLSGSISLKGARIDDLA 120 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTP 152 Y V NSP + L SPSNT Y+AE +V+ A +++P+ NTVW LTP Sbjct: 121 FVQYRETVDPNSPAIVLFSPSNTAEPYYAEFGWVNAAGAKVQVPDQNTVWQQDGANALTP 180 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212 TP+KL + N + + F+RTIS+D+HYLF I D VTN + P G I RH + Sbjct: 181 ATPVKLTYTNGDGLTFQRTISVDDHYLFTIKDDVTNAGSAPVTLYPYGLISRHGTPHVSG 240 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + EG I LG+K L E Y ++ + F +N WLGI+DKYWA+ +P + Sbjct: 241 YYILHEGLIGYLGEKGLQEFTYKKMDDEKAAKFDITNGWLGITDKYWAAALLPMTDARLQ 300 Query: 273 SQF-KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE-------FP--TIHHYE 322 + + L D RYQ + N T+ G S T + LFAGAKE FP + Y Sbjct: 301 ANYSSKLVDNQHRYQTDYVENPQTVPAGGSATVSTRLFAGAKEAGVVGINFPLGGLGGYN 360 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 + L + F++LIDWGWFYF+ KPMF+ + +F+ GNFG++I+L TV VKL F PLA K Sbjct: 361 QQLGLNHFDLLIDWGWFYFLTKPMFLALDFFFRFFGNFGVSILLVTVLVKLAFLPLANKS 420 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y S A MK IQP++ L+E++ + Q+ M+++YK INP+AGC P++LQIPVFF+ Sbjct: 421 YASMAKMKAIQPQLQALKERYPDDRMKQ-QQEMMEIYKKEKINPVAGCLPVVLQIPVFFS 479 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF---YLPGFMH---VGIWPII 496 +YKV+ +++EMRHAPF GWIKDL+A DPTN+FTLFG++PF LP F H +GIWPII Sbjct: 480 LYKVLFVTIEMRHAPFIGWIKDLSAPDPTNLFTLFGLIPFDPTQLPLFGHYLALGIWPII 539 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M ++M+ QMK++P P D QAMI NWMP++F F L+ FPAGL+IYW+W+N +S++QQ+ I Sbjct: 540 MGITMWFQMKLNPAPPDPTQAMIFNWMPLIFTFMLAGFPAGLVIYWAWNNTLSVLQQSFI 599 Query: 557 MKMHGAEIGLIDRLRSTFSK 576 M+ +G ++ L D +R TF K Sbjct: 600 MRRNGVKVELFDNIRGTFRK 619 >gi|170743186|ref|YP_001771841.1| 60 kDa inner membrane insertion protein [Methylobacterium sp. 4-46] gi|254773005|sp|B0UHI1|OXAA_METS4 RecName: Full=Inner membrane protein oxaA gi|168197460|gb|ACA19407.1| 60 kDa inner membrane insertion protein [Methylobacterium sp. 4-46] Length = 624 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 252/616 (40%), Positives = 365/616 (59%), Gaps = 50/616 (8%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMN-------------NERKNIQTVKQ------- 45 N +AIALS+ ++ W F P++E N + + + Sbjct: 7 NMIIAIALSLAVLLGWNYFVTAPQVERQRQQQAAQVNPSQGVNPSQGVDPSQGVNASPSP 66 Query: 46 -------------PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 P S A L D +AL+ +PRV + +L GS+ LKG + DD+ Sbjct: 67 KEGGPSAPVPGTLPGAAGGSPQAALARD--EALARAPRVRIDTEALRGSVALKGGRIDDV 124 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L+GYH V SP + LLSP+ + N Y+AE +V N LP S+TVW G +LT Sbjct: 125 ALKGYHETVDPKSPEIVLLSPAGSANPYYAEFGWVGQ-NAGPLPGSDTVWT-ADGDVLTA 182 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTAT 211 P+ L F N ++F RT+S+D+ Y+F I D+V N + + P G + R KP T Sbjct: 183 KKPLVLTFDNGAGLVFRRTLSVDDKYMFTIEDSVENKGPNPVTLYPYGLVSRWGKPHT-Q 241 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKS---------SISNFHESNSWLGISDKYWASV 262 + + EG I V+GDK L E Y + K +S + +LGI+DKYWA+ Sbjct: 242 GYYVLHEGMIGVVGDKGLQEYTYDKMAKENPLGAPGTRGVSWPGATGGFLGITDKYWAAA 301 Query: 263 FIPSKETSFHSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 IP ++ + F +G + YQA + PG S+ + LFAGAKE T+ Y Sbjct: 302 TIPDQQAPYTGSFTERDEGATKVYQASSLGEARAVAPGASVQASQRLFAGAKEVSTVDAY 361 Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 + L I +F++LIDWGWFYFI KPMF + FY L GNFG++I++ T+ +KL F P+A + Sbjct: 362 REKLNIKQFDLLIDWGWFYFITKPMFKALDLFYKLFGNFGVSILVVTLILKLFFLPIANR 421 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 YVS A MK +QP++ +RE++ + Q+AM++LYK INP+AGCWP+L+QIPVFF Sbjct: 422 SYVSMAKMKAVQPEMTAIRERYADDKVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFF 480 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 ++YKV+ +++EMRHAPF+GWI+DLAA DPT+I LFG+LPF P +H+G+WPI+M ++M Sbjct: 481 SLYKVLFVTIEMRHAPFFGWIRDLAAPDPTSIVNLFGLLPFTPPDLLHLGVWPIVMGITM 540 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F+QMKM+P P D QA + +MP++F F L SFPAGL+IYW+W+N++SI+QQ IM+ +G Sbjct: 541 FLQMKMNPAPPDPVQAQVFTFMPIIFTFMLGSFPAGLVIYWAWNNLLSILQQYWIMRRNG 600 Query: 562 AEIGLIDRLRSTFSKN 577 ++ L D LRSTF + Sbjct: 601 VKVELWDNLRSTFQRR 616 >gi|92119160|ref|YP_578889.1| putative inner membrane protein translocase component YidC [Nitrobacter hamburgensis X14] gi|122416784|sp|Q1QH68|OXAA_NITHX RecName: Full=Inner membrane protein oxaA gi|91802054|gb|ABE64429.1| protein translocase subunit yidC [Nitrobacter hamburgensis X14] Length = 609 Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust. Identities = 249/605 (41%), Positives = 370/605 (61%), Gaps = 25/605 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE------MNNERKNIQTVKQPNQVDNSY- 53 M N N +AI LS +I+ AWQ FY P++E+ ++ T PN + Sbjct: 2 MSENRNTIIAIVLSGLILIAWQYFYNIPQMEKDRAAQQAQSQTAKSPTEPTPNSPKPDHP 61 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 AA + R A++ +PRV++ P L GSI+LKGA+ DDL L + V SP + L SP Sbjct: 62 AAESVVARGVAIATTPRVKIDTPRLSGSISLKGARIDDLLLTKFRETVDPASPAIELFSP 121 Query: 114 SNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 S T Y+AE +V+ T + +P+ NTVW LT +TP+ L + N + F RTI Sbjct: 122 SGTTTPYYAEFGWVAATGSTARVPDQNTVWQQEGSGALTQSTPVTLKYDNGEGLTFRRTI 181 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 ++D+HYLF I D VTN + P I RH + + + EG I LGD+ L E Sbjct: 182 AVDDHYLFTIKDEVTNAGGAPVTLYPFALISRHGTPAVSGYYILHEGLIGYLGDQKLQEY 241 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQAKFSA 291 Y I+++ +F +N WLGI+DKYWA+ +P ++F G + YQA + Sbjct: 242 SYKKIDEAKSVSFKVTNGWLGITDKYWAAALLPDTSAQLQARFSSNESGSVKTYQADYLE 301 Query: 292 NEITILPGKSITTTNFLFAGAKE---------FPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 + TI G + + LFAGAKE F + Y K L + F++LIDWGWFYFI Sbjct: 302 DAQTIPVGGTGSVNTRLFAGAKEAGVVGINFPFVELGGYNKQLGLNHFDLLIDWGWFYFI 361 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KPMF+ + +F+++ GNFGIAI+ TV +K +FFPLA + Y S A MK +QP+I L+E+ Sbjct: 362 TKPMFLALDFFFHVFGNFGIAILFVTVLIKAIFFPLANRSYASMAKMKAVQPQIAALKER 421 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 F + LQ+ M+++YK INP++GC P++LQIPVFF++YKV+ +++EMRHAPF+ WI Sbjct: 422 FPDDKMK-LQQEMMEIYKKEKINPISGCLPMVLQIPVFFSLYKVLFVTIEMRHAPFFAWI 480 Query: 463 KDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 KDL+A DPT+IF LFG+LP+ L ++ +G WPIIM ++M+ QMK++P P D Q Sbjct: 481 KDLSAPDPTHIFNLFGLLPYDPSAVPLLGPYLAIGAWPIIMGITMWFQMKLNPTPPDPTQ 540 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +I +WMPV+F F L++FPAGL+IYW+W+N +S++QQ+ IM+ +G ++ L++ ++S F + Sbjct: 541 KLIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVIQQSYIMRRNGVKVELLNNVKSVFRR 600 Query: 577 NYNSQ 581 + + Sbjct: 601 KSSDK 605 >gi|85717142|ref|ZP_01048101.1| putative inner membrane protein translocase component YidC [Nitrobacter sp. Nb-311A] gi|85696033|gb|EAQ33932.1| putative inner membrane protein translocase component YidC [Nitrobacter sp. Nb-311A] Length = 614 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 247/606 (40%), Positives = 372/606 (61%), Gaps = 31/606 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA----- 55 M N N +AI LS +++ AWQ FY P++E+ + + Q+ +Q ++S AA Sbjct: 1 MSENRNTIIAIVLSALVLIAWQYFYNIPQMEK-DRAAQQAQSELAKSQKESSEAAPNSPT 59 Query: 56 -------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 + R A++ PRV++ P L GS++L GA+ DDL L Y V SP + Sbjct: 60 PGQPAAKSAVVARDVAIASKPRVKIHTPRLSGSLSLTGARIDDLLLTKYRETVDPASPAI 119 Query: 109 TLLSPSNTKNAYFAELDYV-STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 L SPS T N Y+AE +V +T + + +P+ +T W LT +TP+ L + N + Sbjct: 120 ELFSPSGTANPYYAEFGWVPATGSTVRVPDRDTPWQQEGSGALTESTPVTLKYDNGEGLT 179 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 F RTIS+D+ YLF I D V+N + P I RH + + + EG I LGD+ Sbjct: 180 FRRTISVDDQYLFTIKDEVSNTGSAPVTLYPFALISRHGTPQVSGYYILHEGLIGYLGDQ 239 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQ 286 L E Y I+++ +F +N WLGI+DKYWA+ +P ++F G + YQ Sbjct: 240 KLQEYSYKKIDEAKSVSFDVTNGWLGITDKYWAAALLPDTSARLQARFSSDQAGSVKTYQ 299 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKE-------FPTIH--HYEKDLAIPRFEMLIDWG 337 + + TI G + + + LFAGAKE FP + Y K L + F++LIDWG Sbjct: 300 TDYLEDARTIPAGGTGSLSTRLFAGAKEAGVVGLNFPLVELGGYNKQLGLNHFDLLIDWG 359 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WFYFI KPMF+ + +F+++ GNFG+AI++ TV +KL+FFPLA + Y S A MK +QP+I Sbjct: 360 WFYFITKPMFLALDFFFHVFGNFGVAILVVTVLIKLVFFPLANRSYASMAKMKAVQPQIT 419 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L+E++ + LQ+ M+++YK INP++GC P+LLQIPVFF++YKV+ +++EMRHAP Sbjct: 420 ALKEQYPDDRMK-LQQEMMEIYKKEKINPISGCLPMLLQIPVFFSLYKVLFVTIEMRHAP 478 Query: 458 FWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 F+ WIKDL+A DPT+IF LFG+LP+ L ++ +G WPIIM ++M+ QMK++P P Sbjct: 479 FFAWIKDLSAPDPTHIFNLFGLLPYDPSVVPLLGPYLAIGAWPIIMGITMWFQMKLNPTP 538 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D Q +I +WMPV+F F L++FPAGL+IYW+W+N +S++QQ+ IM+ +G ++ L D ++ Sbjct: 539 PDPTQKIIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVIQQSYIMRRNGVKVELFDNVK 598 Query: 572 STFSKN 577 STF + Sbjct: 599 STFRRK 604 >gi|298290371|ref|YP_003692310.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Starkeya novella DSM 506] gi|296926882|gb|ADH87691.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Starkeya novella DSM 506] Length = 609 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 244/602 (40%), Positives = 362/602 (60%), Gaps = 29/602 (4%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEM------------------NNERKNIQTVK 44 N N +AI LS+ ++ AWQ F P++E+ + E Sbjct: 4 ENRNMIIAIVLSMAVLIAWQYFSGIPQMEQQRQQHAAQQQAAQQQAAQPSGEAGTAAPAP 63 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + + A RA+AL+ SPR + P +IGS+ LKG + DDL+L+ Y V N Sbjct: 64 GTSAPAPAGTAPKALTRAEALARSPRAVIDTPRVIGSVALKGGRIDDLSLKDYRETVDPN 123 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 SPI+ LLSPS N ++AE +V A ++++PN+ T+W G LT P+ L + N Sbjct: 124 SPIIVLLSPSGGPNPFYAEFGWVPGAGASVQVPNAETLWTAPEGAKLTHEAPLVLSWDNG 183 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 ++F RT+S+D +Y+F +VD V N + + P G + RH + + EG I V Sbjct: 184 AGLIFRRTLSIDANYMFHVVDEVENTTAAPVALHPYGLVSRHGTPHVLGYYILHEGLIGV 243 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + L E KY DI + F WLGI+DKYWA+ IP + ++F G+ Sbjct: 244 TSEAGLHEIKYKDIAERKTETFPSVGGWLGITDKYWAATVIPGIQEKVQARFSAAQAGND 303 Query: 284 -RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQ F + +++ PG +T LFAGAKE + Y+ I RF++LIDWGWFYFI Sbjct: 304 FSYQTDFLGDAVSVAPGAKASTEGRLFAGAKEVRVVDGYQSTYNIDRFDLLIDWGWFYFI 363 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F+++ + Y VGNFG+AI++ TV +K++FFPLA K Y S A MK +QP+I LRE+ Sbjct: 364 TKPLFLVIDWIYKGVGNFGVAILIVTVMLKIVFFPLANKSYASMAKMKAVQPEITALRER 423 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + + LQ+ M+++YK INP+AGC PI++QIPVFFA+YKV+ +++EMRHAPF+GWI Sbjct: 424 YGDDRVK-LQQEMMEIYKKEKINPVAGCLPIVIQIPVFFALYKVLFVTIEMRHAPFFGWI 482 Query: 463 KDLAAADPTNIFTLFGILPFYLPG-------FMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 KDL+A DPT IF LFG++P + PG F+ +G+WPIIM ++M+ QMK++P P D Sbjct: 483 KDLSAPDPTTIFNLFGLIP-WDPGQVPVIGHFLLLGVWPIIMGITMWAQMKLNPAPPDPT 541 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 Q I +WMP++F F L SF +GL+IYW+W+N +S++QQ++IM+ +G +I L D ++ F Sbjct: 542 QKAIFDWMPLIFTFMLGSFASGLVIYWAWNNTLSVIQQSIIMRRNGVKIELWDNVKELFG 601 Query: 576 KN 577 + Sbjct: 602 RK 603 >gi|158425677|ref|YP_001526969.1| putative inner membrane protein translocase component YidC [Azorhizobium caulinodans ORS 571] gi|158332566|dbj|BAF90051.1| 60 kDa inner membrane protein [Azorhizobium caulinodans ORS 571] Length = 607 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 247/607 (40%), Positives = 367/607 (60%), Gaps = 27/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT-----VKQPNQV------ 49 M N N F+AI LS++I+ WQ F P+ E+ + Q P+ Sbjct: 1 MTDNRNMFIAIGLSLVILIGWQYFIALPQAEKQRQIQAQQQAAQATQTPSPSAEAAQGGG 60 Query: 50 -------DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 A + RAQAL+ +PRV ++ PSL GSI+L+GA+ DDL L + V Sbjct: 61 AAPTAPGSTGVAGSRVMTRAQALAATPRVAIETPSLRGSISLRGARADDLTLSQFRETVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDY-VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 SP + LLSPS + ++AE + V+ N+ +P +T+W +G LTP TP+ L + Sbjct: 121 PKSPNIVLLSPSGSPEPFYAEFGWTVAPGANLPVPGPDTLWTAEAGAKLTPATPLVLTWD 180 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 N +LF RT ++D+ Y+F + D V N G + RH + + EG I Sbjct: 181 NGQGLLFRRTFTVDDRYMFTVKDEVENKGAAAATLYSYGLVSRHGMPHTQGYYILHEGLI 240 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 V+GD L E Y+ ++ + + WLGI+DKYWA+ IP ++ S+F + Sbjct: 241 GVMGDHGLQEVTYAKMDDAKPLAMKATGGWLGITDKYWAATVIPDQKAQVDSRFSSSTVA 300 Query: 282 HAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 R +QA + + +I PG SI + + LFAGAKE + YE+ I RF++LIDWGWFY Sbjct: 301 GTRTFQADYLGSAQSIAPGASIASQSRLFAGAKEVAVVDGYERQYGIDRFDLLIDWGWFY 360 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI KP+F+++ + Y LVGNFG+AI++ TV +K +FFPLA K Y S A MK +QP++ +R Sbjct: 361 FITKPLFLVIDWIYKLVGNFGVAILIVTVLLKGIFFPLANKSYASMAKMKALQPEMMAIR 420 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E++ + Q+A ++LYK INP+AGC PIL+QIPVFFA+YKV+ +++EMR APF+G Sbjct: 421 ERYADDKVK-QQQATMELYKKEKINPVAGCLPILIQIPVFFALYKVLFVTIEMRQAPFFG 479 Query: 461 WIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 WI DL+A DPT +F LFG++P+ L ++ +G WP+IM ++M++QMK++P P D Sbjct: 480 WIHDLSAPDPTTVFNLFGLIPWDPSVVPVLGPYLMLGAWPLIMGVTMWVQMKLNPAPPDP 539 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 QAMI N+MP++F F L+ F AGL+IYW+W+N +S++QQAVIM+ +G +I L D + TF Sbjct: 540 TQAMIFNYMPIIFTFMLAHFAAGLVIYWAWNNTLSVLQQAVIMRRNGVKIELWDNITRTF 599 Query: 575 SKNYNSQ 581 SK ++ Sbjct: 600 SKKKTAK 606 >gi|154250755|ref|YP_001411579.1| 60 kDa inner membrane insertion protein [Parvibaculum lavamentivorans DS-1] gi|154154705|gb|ABS61922.1| 60 kDa inner membrane insertion protein [Parvibaculum lavamentivorans DS-1] Length = 609 Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust. Identities = 253/610 (41%), Positives = 369/610 (60%), Gaps = 38/610 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41 M N N+ +AI LSV++ WQ F++ P++E ++ + Sbjct: 1 MGDNRNFIIAIFLSVLVFIGWQYFFIEPQMEAERARQEQLAADNGTAEPAPGAAPSAPGD 60 Query: 42 ----TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 +V P AA R +AL+ S RV + + L GS++L+GA+FDDL L Y Sbjct: 61 ARLPSVDAPATRAPGVAASGAVARDEALAQSARVPILSEELQGSVSLRGARFDDLKLLKY 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPI 156 ++ V SP V L SP T+ YF+E +++ NI LP S T W L +G LTP TP+ Sbjct: 121 NVTVDPESPEVELFSPVRTERPYFSEFGFIAAPGANINLPTSATEWELEAGDRLTPQTPV 180 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + N ++F R I+LDEH+LF + D + N S +++ P G I R ++ F + Sbjct: 181 TLRWDNGQGLVFHREIALDEHFLFTVTDRIENLSANEVTLYPYGLISRTGRPAGSSFFIL 240 Query: 217 QEGFIA---VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 EGFI +G+K++ Y D E+ ++ WLGI+DKYWA+ +P +F + Sbjct: 241 HEGFIGEFPSVGEKAIT---YDDAEEDDPVQVTDTEGWLGITDKYWAAALVPQSGLNFVA 297 Query: 274 QFKYLSD-GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 F D YQA F T+ G SIT N LFAGAK I Y +D I +F + Sbjct: 298 NFSEHPDPAIVNYQADFRYGAQTVPAGGSITLNNRLFAGAKVSTVIDSY-RDAGIYKFSL 356 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWF+F+ +PMF + + VGNFGIAI++ TV +KL+F+PLA K YV+ + MK + Sbjct: 357 LIDWGWFWFLTQPMFDALHFIALHVGNFGIAILVITVLIKLVFYPLANKSYVAMSKMKKL 416 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP++++LRE++K + Q+ +++LYK +NPLAGC P+L+QIPVFFA+YKV+ +++E Sbjct: 417 QPEMEKLRERYKDDKLK-QQQEIMELYKKEKVNPLAGCLPVLIQIPVFFALYKVLFVTIE 475 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI DL+A DPT+IF LFG++P+ P + +GIWP+IM +MF+Q +M+P PA Sbjct: 476 MRHAPFFGWINDLSAPDPTSIFNLFGLIPWDPPSMLMIGIWPLIMGFTMFVQQRMNPLPA 535 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL-----I 567 D QA I WMPV+F F L+SFPAGL+IYW+W+N +S++QQ VIMK G +I + + Sbjct: 536 DPIQAQIFTWMPVIFTFMLASFPAGLVIYWAWNNTLSVIQQGVIMKRQGVKIEIFSNLGL 595 Query: 568 DRLRSTFSKN 577 ++L FS N Sbjct: 596 EKLAGVFSGN 605 >gi|319406774|emb|CBI80407.1| translocase precursor subunit [Bartonella sp. 1-1C] Length = 612 Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust. Identities = 264/607 (43%), Positives = 375/607 (61%), Gaps = 32/607 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ---VDNSYAA-- 55 ME N N+F+AI LS ++ AW Y+ P+ ++ + Q + N ++ Y + Sbjct: 1 MEYNRNFFIAIGLSFVVFVAWHFLYIVPQQAKLQESKITTQKLSNHNAALPTNDPYFSHN 60 Query: 56 VLIDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 DD R L+ + RV +K L GSINL G +FDDL L+ Y L V Sbjct: 61 ASTDDTVPVANRPITPEVRKAELAKTNRVLIKTNELEGSINLVGGKFDDLLLKKYRLKVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLIS-GKILTPTTPIKLVF 160 SP + LL+P+ YFAE + S++ + LP SNT W L LTP+TPI LV+ Sbjct: 121 KKSPEIILLNPNGLPTTYFAEFGFTSSSLPAQALPQSNTKWQLEGDNTTLTPSTPITLVY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 N +F RT S+DEHY+F I D+++N S + S RI R P TN T+ + EG Sbjct: 181 NNGQGQIFHRTFSVDEHYMFTIKDSISNESSSPVYLSSYARIARAAPPEDTNATYLLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEKSSIS--NFHES-------NSWLGISDKYWASVFIPSKETS 270 I + GD SL +KY+ + + S + N +S W+GI+DKYWA IP ++T Sbjct: 241 MIGIAGD-SLKTEKYTALAELSPNPQNGQKSVIFPNITRGWIGITDKYWAVAVIPPQDTE 299 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + S+F Y + YQ+ + +T+ P ++ T TN LFAGAK I+HY+ L I +F Sbjct: 300 YTSRFVYFDRLNTHYQSDLQSALLTVPPHETKTITNRLFAGAKRVEIINHYQNQLKINKF 359 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +LIDWGWF FI KPMF L+ Y NFG+AI+L TV +K+L FPLA K Y S A +K Sbjct: 360 SLLIDWGWFDFITKPMFALIDILYKYTENFGVAILLITVLLKILLFPLAHKSYKSIARLK 419 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 IQP + E++EK+ + Q+A+I+LYKT INP AGCWPIL+Q P+FFA+YKV+ I+ Sbjct: 420 VIQPMMLEIKEKYADDRNKQ-QQAIIELYKTKKINPFAGCWPILIQFPIFFALYKVLYIT 478 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P Sbjct: 479 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYAVPTFLILGAWPLIMGITMFLQMQMNPL 538 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D Q ++ WMP++F L+SFPAGL+IYW+W+N++SI+QQ++IMK G +I D L Sbjct: 539 PQDPTQVVVFRWMPIIFTIMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKIEFFDNL 598 Query: 571 RSTFSKN 577 ++ K+ Sbjct: 599 KAIVQKD 605 >gi|319403768|emb|CBI77352.1| translocase precursor subunit [Bartonella rochalimae ATCC BAA-1498] Length = 612 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 264/613 (43%), Positives = 375/613 (61%), Gaps = 44/613 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N N+F+AI LS ++ AW Y+ P+ ++ + Q ++ N AA+ +D Sbjct: 1 MEYNRNFFIAIGLSFVVFVAWHFLYIVPQQAKLQESKITTQ------KLSNHNAALPTND 54 Query: 61 ------------------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 R L+ + RV +K L GSINL G +FDDL L+ Sbjct: 55 PYFSHNASTNDTVPVANRPITPEIRKAELAKTNRVLIKTNELEGSINLVGGKFDDLLLKK 114 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLIS-GKILTPTT 154 Y L V SP + LL+P+ YFAE + S++ + LP SNT W L LTP+T Sbjct: 115 YRLKVDKKSPEIILLNPNGLPTTYFAEFGFTSSSLPAQALPQSNTKWQLEGDNTTLTPST 174 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-T 213 PI LV+ N +F RT S+DEHY+F I D+++N S + S RI R P TN T Sbjct: 175 PITLVYNNGQGQIFHRTFSVDEHYMFTIKDSISNESNSPVYLSSYARIARAAPPEDTNAT 234 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSIS--NFHES-------NSWLGISDKYWASVFI 264 + + EG I + GD SL +KY+ + + S + N +S W+GI+DKYWA I Sbjct: 235 YLLHEGMIGIAGD-SLKTEKYTALAELSPNPQNGQKSVIFPNITRGWIGITDKYWAVAVI 293 Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 P ++T + S+F Y + YQ+ + +T+ P ++ T TN LFAGAK I+HY+ Sbjct: 294 PPQDTEYTSRFVYFDRLNTHYQSDLQSALLTVPPHETKTITNRLFAGAKRVEIINHYQNQ 353 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 L I +F +LIDWGWF FI KPMF L+ Y NFG+AI+L TV +K+L FPLA K Y Sbjct: 354 LKINKFSLLIDWGWFDFITKPMFALIDILYKYTENFGVAILLITVLLKILLFPLAHKSYK 413 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A +K IQP + E++EK+ + Q+A+I+LYKT INP AGCWPIL+Q P+FFA+Y Sbjct: 414 SIARLKLIQPMMLEIKEKYADDRNKQ-QQAIIELYKTKKINPFAGCWPILIQFPIFFALY 472 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 KV+ I++EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+Q Sbjct: 473 KVLYITIEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYAVPTFLILGAWPLIMGITMFLQ 532 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M+M+P P D Q ++ WMP++F L+SFPAGL+IYW+W+N++SI+QQ++IMK G +I Sbjct: 533 MQMNPLPQDPTQVIVFRWMPIIFTIMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKI 592 Query: 565 GLIDRLRSTFSKN 577 D L++ K+ Sbjct: 593 EFFDNLKAIVQKD 605 >gi|90422337|ref|YP_530707.1| putative inner membrane protein translocase component YidC [Rhodopseudomonas palustris BisB18] gi|90104351|gb|ABD86388.1| protein translocase subunit yidC [Rhodopseudomonas palustris BisB18] Length = 632 Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust. Identities = 252/626 (40%), Positives = 371/626 (59%), Gaps = 52/626 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----EMNNERKNIQTVK----------- 44 M N N +A+ LS +++ WQ F+ P++E E+ ++ + + + Sbjct: 1 MTDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAELASKSQAVNPAQPQGAQPATPAA 60 Query: 45 -----------------QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGA 87 PN + A + R AL+ SPRV++ P L GSI LKGA Sbjct: 61 PGAAIPQPNAATAPAGSAPNAI-QPQANTPVVSREAALAASPRVKIDTPRLSGSIALKGA 119 Query: 88 QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLIS 146 + DD+ L + V SP + L SPS + N Y+AE +V+ A ++++P+ NT W Sbjct: 120 RIDDIALVQFRETVDPKSPAIELFSPSGSANPYYAEFGWVAAAGTSVKIPDQNTQWEQDG 179 Query: 147 GKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK 206 LTP P+ L + N + F RTI++DE YLF + D VTN + P I RH Sbjct: 180 TGSLTPNHPVTLKYDNGEGLTFRRTITIDERYLFTMKDEVTNVGNAPVTLYPFALISRHG 239 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 + + EG + LG++ L E YS I+++ NF +N WLGI+DKYWA+ +P Sbjct: 240 TPHVAGYYILHEGLVGYLGEQGLQEYGYSKIDEAKAVNFKVTNGWLGITDKYWAAALLPD 299 Query: 267 KETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE-------FPTI 318 ++F L++ YQ + + TI G + T LFAGAKE FP + Sbjct: 300 TSAQLQARFSSNLANNVRTYQTDYLQDAQTIAIGGTGTANARLFAGAKEAGTVGINFPAL 359 Query: 319 H--HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 Y KDL + F++LIDWGWFYFI KPMF+ + +F++LVGNFGIAI+L TV +KLLF Sbjct: 360 GLGGYNKDLGLNHFDLLIDWGWFYFITKPMFVALDFFFHLVGNFGIAILLVTVIIKLLFL 419 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 PLA K Y S A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC P+LLQ Sbjct: 420 PLANKSYASMAKMKAIQPQLAALKERHPDDKAK-QQQEMMEIYRKEKINPVAGCLPVLLQ 478 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL---PFYLPGFMH---V 490 IPVFF++YKV+ +++EMRHAPF+GWI DL+A DPTN+F LFG+L P ++P H + Sbjct: 479 IPVFFSLYKVLFVTIEMRHAPFYGWIHDLSAPDPTNLFNLFGLLAFDPTHVPVIGHYLVL 538 Query: 491 GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 G WPI+M ++M++QMK++P P D Q MI WMP++F F L+SFPAGL+IYW+W+N++S+ Sbjct: 539 GAWPIVMGITMWVQMKLNPTPPDPTQQMIFAWMPLIFTFMLASFPAGLVIYWAWNNLLSV 598 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSK 576 VQQ IM+ +G ++ L D L+++F++ Sbjct: 599 VQQGYIMRRNGVKVELFDNLKASFAR 624 >gi|154245865|ref|YP_001416823.1| putative inner membrane protein translocase component YidC [Xanthobacter autotrophicus Py2] gi|154159950|gb|ABS67166.1| 60 kDa inner membrane insertion protein [Xanthobacter autotrophicus Py2] Length = 616 Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust. Identities = 244/614 (39%), Positives = 355/614 (57%), Gaps = 40/614 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN---------------------NERKN 39 M N N F+AI LS+ I+ WQ F+ P+ E Sbjct: 1 MSDNRNMFIAIGLSLAILIGWQFFFGIPQAERQRQAAEQQRIAQQAQQPAPGATPGATPG 60 Query: 40 IQTVKQPNQVDNSYAAVLIDD--------RAQALSMSPRVELKNPSLIGSINLKGAQFDD 91 P S R +AL+++PR ++ L GSI LKG + DD Sbjct: 61 TTAGAAPGATPGSAGVPQAGSPVPARPLTREEALALTPRAAIETQRLKGSIALKGGRVDD 120 Query: 92 LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKIL 150 L L YH V SP + LLSPS N ++AE + + A +++P +TVW + L Sbjct: 121 LLLTEYHETVDPKSPNIVLLSPSGAPNPFYAEFGWTAAAGTGVKVPGPDTVWT--TSGTL 178 Query: 151 TPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210 T TP+ L + N ++F RT ++D+HY+F + D V N + + P + RH Sbjct: 179 TEKTPLTLSWDNGAGLIFHRTYTIDDHYMFAVKDEVENKTGAAVTLYPYALVSRHGIPHV 238 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 + + EG I VLGD L E Y+ ++K F + WLGI+DKYWA+ IP + Sbjct: 239 AGFYILHEGLIGVLGDSGLQEITYAKMDKEKPHTFAATGGWLGITDKYWAATVIPDQSVK 298 Query: 271 FHSQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 ++F + G +QA + A +T+ PG ++ LFAGAK + Y+ I R Sbjct: 299 VDAKFSTSTFAGTQTFQADYLAAPLTVEPGATVAAKGQLFAGAKVVQVVDGYKTKYGIDR 358 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F++LIDWGWFYFI KP+F+ + + Y LVGNFG+AI++ TV +K LFFPLA K Y S A M Sbjct: 359 FDLLIDWGWFYFITKPLFLAIDWLYRLVGNFGVAILIITVALKGLFFPLANKSYASMAKM 418 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K +QP++ +RE++ + Q+A+++LYK INP+AGC PI++QIPVFFA+YKV+ + Sbjct: 419 KAVQPEVTAIRERYADDKVK-QQQALMELYKKEKINPVAGCLPIVIQIPVFFALYKVLFV 477 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFI 503 ++EMRHAPF+GWI+DL+A DPT IF LFG++P+ L G++ +G WPIIM ++M++ Sbjct: 478 TIEMRHAPFFGWIRDLSAPDPTTIFNLFGLIPWDPSSVPVLGGYLMLGAWPIIMGITMWV 537 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 QMK++P P D Q MI NWMP++F F L+ F AGL+IYW+W+N +S+ QQA+IMK +G + Sbjct: 538 QMKLNPAPPDPTQQMIFNWMPIIFTFMLAHFAAGLVIYWAWNNTLSVSQQAMIMKRNGVK 597 Query: 564 IGLIDRLRSTFSKN 577 I L D ++S F K Sbjct: 598 IELWDNIKSAFKKK 611 >gi|27383209|ref|NP_774738.1| inner membrane protein translocase component YidC [Bradyrhizobium japonicum USDA 110] gi|38502983|sp|Q89BQ0|OXAA_BRAJA RecName: Full=Inner membrane protein oxaA gi|27356383|dbj|BAC53363.1| blr8098 [Bradyrhizobium japonicum USDA 110] Length = 616 Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust. Identities = 253/615 (41%), Positives = 367/615 (59%), Gaps = 42/615 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK---------------- 44 M N N +A+ LS +++ AWQ FY P +E+ +++ ++ Sbjct: 2 MTDNRNTILAVILSGLVLIAWQYFYNVPAMEKQRAQQQAQAELQKTTPQPTASATPGATP 61 Query: 45 ------QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 QP+ A + R A++ SPRV++ P + GSI+LKG + DD+ L Y Sbjct: 62 QSGGAAQPSTPAAGQQAQPVVARDAAIAASPRVKIDTPRIAGSISLKGGRIDDVALVQYR 121 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYV-STANNIELPNSNTVWNLISGKILTPTTPIK 157 V SP + L SPS T Y+AE +V +T +LP++ T+W LTPTTP Sbjct: 122 ETVDPKSPPIVLYSPSGTAEPYYAEFGWVPATGVTAKLPDAQTLWQQDGSGSLTPTTPAV 181 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 L + N + F RTIS+D+HYLF I D V+N + P I RH + + + Sbjct: 182 LKWDNGEGLTFRRTISVDDHYLFTIKDEVSNVGNAPVTLYPFALISRHGTPQVSGYYILH 241 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 EG I L L E Y I+++ NF +N WLG++DKYWAS +P ++F Sbjct: 242 EGLIGYL--DGLQEYAYKKIDEAKSVNFKATNGWLGMTDKYWASALLPDTSAQLQARFSS 299 Query: 278 LSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKE-------FPTIHH--YEKDLAI 327 G+ YQ + + +T+ G S T LFAGAKE FP H Y K+L + Sbjct: 300 NPVGNVHTYQTDYLLDPVTVAIGGSATANARLFAGAKEAGVVGINFPLAGHGGYNKELNL 359 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 F++LIDWGWFYFI KPMF+ + +FY GNFGI+I+L TV VKLLFFPLA K Y S A Sbjct: 360 NHFDLLIDWGWFYFITKPMFLGLDFFYRFFGNFGISILLVTVIVKLLFFPLANKSYASMA 419 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 MK+IQP++ L+E++ + Q+ M+++Y+ INP+AGC P+++QIPVFF++YKV+ Sbjct: 420 KMKSIQPQLQALKERYPDDKVK-QQQEMMEIYRKEKINPVAGCLPVVIQIPVFFSLYKVL 478 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF---YLPGFMH---VGIWPIIMSLSM 501 +++EMR APF+GWIKDL+A DPTN+F LFG++P +P F H +GIWPIIM ++M Sbjct: 479 FVTIEMRQAPFYGWIKDLSAPDPTNLFNLFGLIPLDPTTIPVFGHYLALGIWPIIMGITM 538 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + QMK++P P D Q MI NWMP++F F L+ FPAGL+IYW+W+N +S++QQ+ IM+ +G Sbjct: 539 WFQMKLNPTPPDPTQQMIFNWMPLIFTFMLAGFPAGLVIYWAWNNTLSVLQQSFIMRRNG 598 Query: 562 AEIGLIDRLRSTFSK 576 ++ L D L++TF++ Sbjct: 599 VKVELFDNLKATFAR 613 >gi|323137577|ref|ZP_08072654.1| membrane protein insertase, YidC/Oxa1 family [Methylocystis sp. ATCC 49242] gi|322397203|gb|EFX99727.1| membrane protein insertase, YidC/Oxa1 family [Methylocystis sp. ATCC 49242] Length = 591 Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust. Identities = 249/595 (41%), Positives = 364/595 (61%), Gaps = 27/595 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------SY 53 E N +A ALS+I + W FY +P EM+ ++K + ++ ++ + Sbjct: 3 ENTKNMLLAAALSLIFIGLWDYFYAFP---EMDKQKKALSEQERMAKIPKLGAPEKAAAA 59 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A ++ R AL++SPRV + S+ GSI LKGA+ DD++L+ YH V SPI+TLLSP Sbjct: 60 AKPVVRSREAALALSPRVAIDTKSISGSIALKGARVDDVSLKNYHQTVDPRSPIITLLSP 119 Query: 114 SNTKNAYFAELDYVS--TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 Y+AEL Y+S T N LPN+ T+W + K LT + P+ L + N ++F+R Sbjct: 120 EEGPEPYYAELGYLSAETENAPVLPNTETLWTADADK-LTTSQPVTLSWDNGQGLVFKRV 178 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 IS+D+ YL + D+V N + R+ R + + EGF+ V+GD E Sbjct: 179 ISIDDEYLLTVKDSVENKGGKPVTLYSYSRVSRVGHPPSAGYAALHEGFVGVIGDTGQ-E 237 Query: 232 QKYSDIEK--SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQAK 288 Y IEK ++ F W+G +DKYW +V P + +++ + G + YQA Sbjct: 238 LTYDKIEKEPNATKTFKGVGGWVGFTDKYWGAVVAPDQNAPMEARYMLMGGGPVKTYQAD 297 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + T+ P S TT ++FAGAKE T+ Y+ + + RF++LIDWGWFYFI +PMF Sbjct: 298 TVSEPKTLEPNASTATTTYVFAGAKEVDTLDAYKANPGLKRFDLLIDWGWFYFITRPMFR 357 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + Y ++GNFG+AI+ TV VK F PLA K Y S A MK IQPKI EL+EK+ Sbjct: 358 LIDFLYRVLGNFGLAILAVTVIVKAAFLPLANKSYKSIAKMKEIQPKIKELKEKYGDDKH 417 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + + M +LYK +NP +GC P+LLQIPVFF++YKV+ +++EMRHAPF+GWIKDL+A Sbjct: 418 KFNMEQM-ELYKREKVNPASGCLPVLLQIPVFFSLYKVLVVTIEMRHAPFFGWIKDLSAP 476 Query: 469 DPTNIFTLFGILPF-------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 DPTN+F LFG++P+ + P ++ +G+WP++M ++M++QMKM+P P D+ Q + Sbjct: 477 DPTNVFNLFGLIPWDPTHVAIFGP-YLALGVWPLVMGVTMWLQMKMNPEPTDEIQKTMFA 535 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 WMPV+F F + SF +GLIIYWSW+N++SIVQQ VIMK G + L D LR TFS+ Sbjct: 536 WMPVMFTFTMGSFASGLIIYWSWNNLLSIVQQGVIMKRAGVKFELWDNLRKTFSR 590 >gi|319898441|ref|YP_004158534.1| translocase precursor subunit [Bartonella clarridgeiae 73] gi|319402405|emb|CBI75946.1| translocase precursor subunit [Bartonella clarridgeiae 73] Length = 612 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 257/611 (42%), Positives = 373/611 (61%), Gaps = 32/611 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV----DNSYAAV 56 ME N N+F+AI LS ++ AW Y+ P+ ++ + + N D ++ Sbjct: 1 MEYNRNFFIAIGLSFVVFVAWHFLYIVPQQAKLQESKIIAHKLSNHNSTFPANDMHFSNH 60 Query: 57 LIDD--------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + D R L+ + RV +K L GSINL G +FDDL L+ Y L V Sbjct: 61 GLKDEIVSITNHHVTPEIRKAELAKTNRVLIKTNELEGSINLVGGKFDDLLLKKYRLTVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGK-ILTPTTPIKLVF 160 SP + LL+P+ YFAE ++S++ + LP SNT W + ILTP+TPI L++ Sbjct: 121 KTSPEIILLNPNGLTTTYFAEFSFISSSLPAKALPQSNTKWQIEGNNTILTPSTPITLIY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 N +F R S+D HY+F I D+++N S I S RI R P TN T+ + EG Sbjct: 181 NNGQGQIFRRIFSVDNHYMFTIKDSISNESSSPIHLSSYARIARAAPPEDTNATYFLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIE---------KSSISNFHESNSWLGISDKYWASVFIPSKETS 270 I + GD SL +KY+ + + S+ + + W+GI+DKYWA IP ++ Sbjct: 241 MIGIAGD-SLKTEKYTALAELNPNPKNGQKSVIFSNVTGGWVGITDKYWAVAVIPPQDKE 299 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + S+F Y + YQ+ + +T+ P ++ T TN LFAGAK I+HY+ L I +F Sbjct: 300 YTSRFVYFDQLNTHYQSDLQSALLTVSPHETKTITNRLFAGAKRVEIINHYQNQLKINKF 359 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +LIDWGWF FI KPMF + Y GNFG+ I+L TV +K+L FPLA K Y S A++K Sbjct: 360 SLLIDWGWFDFITKPMFAFIDILYKYTGNFGVTILLITVLLKILLFPLAHKSYKSMAHIK 419 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 IQP + E++EK+ + Q+A+I+LYKT INPLAGCWP+L+Q P+FFA+YKV+ I+ Sbjct: 420 LIQPMMLEIKEKYAHDRNKQ-QQAIIELYKTKKINPLAGCWPVLIQFPIFFALYKVLYIT 478 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWIKDLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P Sbjct: 479 IEMRHAPFFGWIKDLAAPDPTSIFNLFGLLPYTVPVFLTLGAWPLIMGITMFLQMQMNPL 538 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D Q ++ W+PV+F L+SFPAGL+IYW+W+N++SI+QQ++IMK G +I D L Sbjct: 539 PQDPTQVIVFRWIPVIFTVMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKIEFFDNL 598 Query: 571 RSTFSKNYNSQ 581 ++ K+ + Sbjct: 599 KAIVQKDTKKE 609 >gi|148258511|ref|YP_001243096.1| putative inner membrane protein translocase component YidC [Bradyrhizobium sp. BTAi1] gi|146410684|gb|ABQ39190.1| protein translocase subunit yidC [Bradyrhizobium sp. BTAi1] Length = 621 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 265/620 (42%), Positives = 375/620 (60%), Gaps = 44/620 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE--------RKNIQTVK-------- 44 M N N +A+ LS +++ WQ FY P++E+ + +K V+ Sbjct: 1 MTDNRNTILAVILSGLVLILWQVFYNGPQMEKQRAQAQMQAELAKKQAPAVQPEATPSAT 60 Query: 45 -QPNQVDN---------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 QPN + + A + R A++ +PRV++ P L GSI+LKGA+ DDL Sbjct: 61 PQPNAAASGSPSAPGGAATTATGVVARDAAIAATPRVKIDTPRLSGSISLKGARIDDLAF 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPT 153 Y V SP + L SPSNT Y+AE +V +++P+ NTVW LTPT Sbjct: 121 VQYRETVDPKSPAIVLFSPSNTAEPYYAEFGWVGAPGAKVQVPDQNTVWQQDGTNALTPT 180 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 TP+KL NA+ + F+RTIS+DEHYLF I D VTN + P G I RH + Sbjct: 181 TPVKLSTTNADGLTFKRTISVDEHYLFTIKDEVTNAGSAPVTLYPFGLISRHGTPHVSGY 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + + EG I LG+K L E Y ++ + F +N WLGI+DKYWA+ +P + + Sbjct: 241 YILHEGLIGYLGEKGLQEYTYKKMDDDKAAKFDVTNGWLGITDKYWATALLPMTDARLTA 300 Query: 274 QF-KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE-------FP--TIHHYEK 323 + L D RYQ + T+ G + + + LFAGAKE FP + Y + Sbjct: 301 NYSSKLVDNQHRYQTDYVETPQTVPAGGAASVSTRLFAGAKEAGVVGINFPIGGLGGYNQ 360 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 L + F++LIDWGWFYF+ KPMF+ + +F+ GNFGI+I+L TV VKLLFFPLA K Y Sbjct: 361 QLGLNHFDLLIDWGWFYFLTKPMFLALDFFFRFFGNFGISILLVTVLVKLLFFPLANKSY 420 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S A MK IQP++ L+E++ + Q+ M+++YK INP+AGC P++LQIPVFF++ Sbjct: 421 ASMAKMKAIQPQLQALKERYPDDRMK-QQQEMMEIYKKEKINPVAGCLPVVLQIPVFFSL 479 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF---YLPGFMH---VGIWPIIM 497 YKV+ +++EMRHAPF+GWIKDL+A DPTN+FTLFG++PF LP F H +GIWPIIM Sbjct: 480 YKVLFVTIEMRHAPFYGWIKDLSAPDPTNLFTLFGLIPFDPTQLPLFGHYLALGIWPIIM 539 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++M++QMK++P P D QAMI NWMP++F F L+ FPAGL+IYW+W+N +S++QQ IM Sbjct: 540 GITMWVQMKLNPAPPDPTQAMIFNWMPIIFTFMLAGFPAGLVIYWAWNNTLSVLQQGFIM 599 Query: 558 KMHGAEIGLIDRLRSTFSKN 577 + +G ++ L D +R TF K Sbjct: 600 RRNGVKVELFDNIRGTFKKK 619 >gi|115522671|ref|YP_779582.1| putative inner membrane protein translocase component YidC [Rhodopseudomonas palustris BisA53] gi|115516618|gb|ABJ04602.1| protein translocase subunit yidC [Rhodopseudomonas palustris BisA53] Length = 626 Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust. Identities = 247/616 (40%), Positives = 365/616 (59%), Gaps = 47/616 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM--------NNERKNIQTVKQPNQVDNS 52 M N N +A+ LS +++ WQ F+ P++E+ + +Q QPN + Sbjct: 1 MTDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAEMAARSQATSQVQPTAQPNAQPGA 60 Query: 53 YAA----------------------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFD 90 A R AL+ SPRV+++ P L GSI+LKGA+ D Sbjct: 61 SGAQPGVPAPQAGTPTPNAAAPAAVTPTVSRDAALAASPRVKIETPRLSGSISLKGARLD 120 Query: 91 DLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST-ANNIELPNSNTVWNLISGKI 149 D+ L + V SP + L SPS +K+ Y+AE +V+ N+++P+ NTVW Sbjct: 121 DIALVQFRETVDPKSPAIELFSPSGSKHPYYAESGWVAAVGTNVKVPDQNTVWTQEGSNS 180 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209 LTPT+P+ L + N + F RTI++DE YLF + D V+N + P I RH Sbjct: 181 LTPTSPVVLRYDNGEGLTFRRTIAVDERYLFTMKDEVSNIGNAPVTLYPFALISRHGAPQ 240 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 + + EG + LG++ L E Y+ I+++ NF +N WLGI+DKYWAS +P Sbjct: 241 VAGYYILHEGLVGYLGEQGLQEYGYAKIDEAKAVNFKVTNGWLGITDKYWASALLPDTTA 300 Query: 270 SFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE-------FP-TIHH 320 ++F L++ YQ + + + G + + LFAGAKE FP Sbjct: 301 QLQARFSSNLANNVRTYQTDYLLDPQVVPIGGTGSANTRLFAGAKEAGVVGIGFPLGFGG 360 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 Y K L + F++LIDWGWFYFI KPMF+ + +FY+LVGNFG++I+ TV +KLLF PLA Sbjct: 361 YNKQLDLNHFDLLIDWGWFYFITKPMFVALDFFYHLVGNFGLSILFVTVIIKLLFLPLAN 420 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 K Y S A MK IQP++ L+++ + Q+ M+++Y+ INP+AGC P+LLQIPVF Sbjct: 421 KSYASMAKMKAIQPQLQALKDRHPDDKAKQ-QQEMMEIYRKEKINPVAGCLPVLLQIPVF 479 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWP 494 F++YKV+ +++EMRHAPF+GWI DL+AADPTNIF LFG++P+ L ++ +GIWP Sbjct: 480 FSLYKVLFVTIEMRHAPFYGWIHDLSAADPTNIFNLFGLIPYDPTQIPVLGYYLVLGIWP 539 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 IIM ++M++QMK++P P D Q MI WMP++F F L+SFPAGL+IYW+W+N++S++QQ Sbjct: 540 IIMGITMWVQMKLNPAPPDPTQQMIFAWMPLLFTFMLASFPAGLVIYWAWNNLLSVIQQG 599 Query: 555 VIMKMHGAEIGLIDRL 570 IM+ +G ++ L D L Sbjct: 600 YIMRKNGVKVELFDNL 615 >gi|300024925|ref|YP_003757536.1| membrane protein insertase, YidC/Oxa1 family [Hyphomicrobium denitrificans ATCC 51888] gi|299526746|gb|ADJ25215.1| membrane protein insertase, YidC/Oxa1 family [Hyphomicrobium denitrificans ATCC 51888] Length = 624 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 247/599 (41%), Positives = 362/599 (60%), Gaps = 31/599 (5%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIE----------EMNNERKNIQTVKQPNQVDNSYAA 55 N A+ALS++++ WQ F+ P ++ ++ + K+ + PN A Sbjct: 12 NLMFAVALSILVLMGWQYFFARPELQNEHARQEFNKKIEAQNKDGSSETPPNVASTPVAP 71 Query: 56 VLID-------------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 D R AL S R++++ PSL GSI+LKG + DDL L Y V Sbjct: 72 PSTDAPTGAQAPATAPVSREAALQGSQRLKIETPSLEGSIDLKGGRLDDLVLMKYRETVD 131 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYV-STANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 NS V LLSPS + YFAE +V + + +++P +++W + SG LTP TP+ L++ Sbjct: 132 PNSARVILLSPSGSPEPYFAEYGWVPQSGSAVKVPTRDSLWTVESGTRLTPETPVTLMWD 191 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 N ++F RT+S+D Y+FKI D + N + ++ P R+ R + + + EG + Sbjct: 192 NGGGLVFHRTVSVDNDYMFKIKDEIENKTQAEVTLLPYARVHRSGHPPSQAFYVLHEGLV 251 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHE--SNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 V GD L E ++D KS + + + WLGI+DKYWA+ +P + + + + L Sbjct: 252 GVSGDHGLQEFTFADALKSGVPTTFDNVTGGWLGITDKYWATALVPEQSEPYRAMYSALK 311 Query: 280 D----GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 G +Q + +++ G LFAGAK+ I YE L I RF+ +ID Sbjct: 312 ARDPAGKDAFQTDYLRGALSVPAGLRKGVEGHLFAGAKQASLIDGYENALGILRFDRMID 371 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWFYFI +P+F LM + LV NFGI I++ TV VK F+PLA KQY S A MK +QP+ Sbjct: 372 WGWFYFITRPLFRLMEFINGLVHNFGITILILTVLVKAAFYPLANKQYESMARMKKLQPE 431 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + ++E++K Q QK + +LY+T INPLAGCWPILLQIPVFFA+YKV+ ++++MRH Sbjct: 432 MQRIKEQYKDDT-QRQQKEIFELYRTQKINPLAGCWPILLQIPVFFALYKVLFVTIDMRH 490 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 APF+GWI DL+A DPT++F LFG+LPF P F+H+G+WP+IM ++M++QM+++PP D Sbjct: 491 APFFGWIHDLSAPDPTSLFNLFGLLPFDSPTFLHIGVWPLIMGVTMWMQMQLNPPQPDPI 550 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 Q I WMPVVF F L+SFPAGL+IYW+WSN +SI+QQ I K +GAE+ L+D ++ TF Sbjct: 551 QQQIFQWMPVVFTFMLASFPAGLVIYWAWSNTLSILQQVRINKKNGAEVHLLDNIKRTF 609 >gi|319405206|emb|CBI78811.1| translocase precursor subunit [Bartonella sp. AR 15-3] Length = 612 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 264/606 (43%), Positives = 372/606 (61%), Gaps = 32/606 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV----DNSYAA- 55 ME N N+F+AI LS ++ AW YV P+ ++ + Q + N D ++ Sbjct: 1 MEYNRNFFIAIGLSFVVFVAWHFLYVIPQQAKLQESKIIAQKLSNHNAALPTNDMHFSNN 60 Query: 56 VLIDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 L DD R L+ + R+ +K L GSINL G +FDDL L+ Y L V Sbjct: 61 ALTDDTVPVTNRPITPEMRKAELAKTDRILIKTNELEGSINLVGGKFDDLLLKKYRLKVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLIS-GKILTPTTPIKLVF 160 SP + LL+PS AYFAE + S++ + LP SNT W L ILTP+TPI LV+ Sbjct: 121 KKSPEIILLNPSGLPTAYFAEFGFTSSSLPAKALPQSNTKWQLEGYNTILTPSTPITLVY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 N +F RT S+D+HY+F I D+++N S I S R+ R P TN T+ + EG Sbjct: 181 NNGQGQIFHRTFSVDDHYMFTIKDSISNESSSPIYISSYARVARTAPPEDTNATYLLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIE---------KSSISNFHESNSWLGISDKYWASVFIPSKETS 270 I + G+ SL +KY+ + + SI + + W+GI+DKYWA IP ++ Sbjct: 241 MIGIAGN-SLKTEKYTALAELSPNPQNGQKSIIFPNITGGWIGITDKYWAVAVIPPQDKE 299 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + S+F Y + YQ+ + +T+ P ++ T N FAGAK I+HY+ L I +F Sbjct: 300 YTSRFVYFDRLNTHYQSDLQSALLTVSPHETKTIINRFFAGAKRVEIINHYQNQLKINKF 359 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +LIDWGWF FI KPMF L+ Y NFGIAI+L TV +K+L FPLA K Y S A +K Sbjct: 360 SLLIDWGWFDFITKPMFTLIDILYKYTENFGIAILLITVLLKILLFPLAHKSYKSMARIK 419 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 IQP + E++EK+ + Q+A+I+LYKT INP AGCWPIL+Q P+FFA+YKV+ I+ Sbjct: 420 LIQPMMLEIKEKYANDRNKQ-QQAIIELYKTKKINPFAGCWPILVQFPIFFALYKVLYIT 478 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P Sbjct: 479 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYAVPTFLILGAWPLIMGITMFLQMQMNPL 538 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D Q ++ WMPV+F L+SFPAGL+IYW+W+N++SI+QQ++IMK G +I D L Sbjct: 539 PQDPTQVIVFRWMPVIFTVMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKIEFFDNL 598 Query: 571 RSTFSK 576 ++ K Sbjct: 599 KAIVQK 604 >gi|86747809|ref|YP_484305.1| putative inner membrane protein translocase component YidC [Rhodopseudomonas palustris HaA2] gi|86570837|gb|ABD05394.1| protein translocase subunit yidC [Rhodopseudomonas palustris HaA2] Length = 629 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 230/528 (43%), Positives = 335/528 (63%), Gaps = 18/528 (3%) Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 R A++ SPR++++ P L G+I+LKGA+ DDL+L V SP + L SPS N Y Sbjct: 93 REAAIAASPRIKVETPRLDGTISLKGARIDDLSLTQLRETVDPKSPPIHLFSPSGGANPY 152 Query: 121 FAELDYVSTA-NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +AE +V A +N++LP+ NT+W LTP++PI L + N + F R I++D+ YL Sbjct: 153 YAEFGWVGAAGSNVKLPDQNTMWQQQGSGALTPSSPITLTWDNGEGLTFRRQIAVDDRYL 212 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F + D VTN + P I RH + + EG I LG+ L E Y+ I++ Sbjct: 213 FTVKDDVTNVGSSPVTLYPYALISRHGTPHVEGYYILHEGLIGYLGEHGLQEYGYAKIDE 272 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQAKFSANEITILP 298 + F +N+W+GI+DKYWAS +P ++F G R YQ + + T+ Sbjct: 273 AKTVGFKATNAWMGITDKYWASALLPDTNAQLQARFSSNQVGATRTYQTDYLEDAKTVPI 332 Query: 299 GKSITTTNFLFAGAKE---------FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 G ++T LFAGAKE F + Y + L + F++LIDWGWFYFI KPMF+ Sbjct: 333 GGTVTANARLFAGAKEARVVGINFPFAGLGGYNQQLGLNHFDLLIDWGWFYFITKPMFLA 392 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + +F++LVGNFG+AI+L TV +K+LF PLA K Y S A MK IQP++ L+E+ + Sbjct: 393 LDFFFHLVGNFGVAILLVTVLIKVLFLPLANKSYASMAKMKAIQPQLLALKERHPDDKAK 452 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 Q+ M+++Y+ INP+AGC P+LLQIPVFF++YKV+ +++EMRHAPF+GWI DL+AAD Sbjct: 453 Q-QQEMMEIYRKEKINPVAGCLPVLLQIPVFFSLYKVLFVTIEMRHAPFFGWIHDLSAAD 511 Query: 470 PTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 PTN+F LFG+LPF L ++ +G+WP++M +M+ QMK++P P D Q MI WM Sbjct: 512 PTNLFNLFGLLPFDPTAIPVLGHYLVLGVWPLVMGFTMWFQMKLNPQPPDPTQQMIFAWM 571 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 PV+F F L+ FPAGL+IYW+W+N++S++QQA IM+ +G ++ L D LR Sbjct: 572 PVIFTFMLAHFPAGLVIYWAWNNLLSVIQQAYIMRRNGVKVELFDNLR 619 >gi|91974551|ref|YP_567210.1| putative inner membrane protein translocase component YidC [Rhodopseudomonas palustris BisB5] gi|91681007|gb|ABE37309.1| protein translocase subunit yidC [Rhodopseudomonas palustris BisB5] Length = 621 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 232/533 (43%), Positives = 338/533 (63%), Gaps = 18/533 (3%) Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 R A++ SPR++++ P L G+++LKGA+ DDL+L YH V S + L SPS + N Y Sbjct: 85 RDAAIAASPRIKVETPRLDGTLSLKGARIDDLSLSQYHETVDPKSAPIHLFSPSGSANPY 144 Query: 121 FAELDYVSTA-NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +AE +V A +N++LP+ NT+W LTP P+ L + N + F R I++D+ YL Sbjct: 145 YAEFGWVGAAGSNVKLPDQNTLWEQEGSGALTPANPVTLKWDNGEGLTFRRQIAVDDRYL 204 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F I D VTN + P I RH + + EG I LG++ L E Y+ I++ Sbjct: 205 FTIKDDVTNVGGGPVTLYPFALISRHGTPHVEGFYILHEGLIGYLGEQGLQEYGYAKIDE 264 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQAKFSANEITILP 298 + F +N+W+GI+DKYWAS +P ++F G R YQ + + T+ Sbjct: 265 AKTVGFKATNAWMGITDKYWASALLPDTNAQLQARFSSNQVGATRTYQTDYLEDAKTVPI 324 Query: 299 GKSITTTNFLFAGAKE---------FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 G + T T LFAGAKE F + Y + L + F++LIDWGWFYFI KPMF+ Sbjct: 325 GGTATATARLFAGAKEARVVGINFPFAGLGGYNQQLGLNHFDLLIDWGWFYFITKPMFLA 384 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + +F++LVGNFG+AI+L TV VKL+F PLA K Y S A MK IQP++ L+E+ + Sbjct: 385 LDFFFHLVGNFGVAILLVTVLVKLIFLPLANKSYASMAKMKAIQPQLLALKERHPDDKAK 444 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 Q+ M+++Y+ INP+AGC P+LLQIPVFF++YKV+ +++EMRHAPF+GWI DL+AAD Sbjct: 445 Q-QQEMMEIYRKEKINPVAGCLPVLLQIPVFFSLYKVLFVTIEMRHAPFFGWIHDLSAAD 503 Query: 470 PTNIFTLFGILPF---YLP---GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 PTN+F LFG++P+ LP ++ +G+WP++M +M+ QMK++P P D Q MI WM Sbjct: 504 PTNLFNLFGLIPYDPSTLPVIGSYLVLGVWPLVMGFTMWFQMKLNPQPPDPTQQMIFAWM 563 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 PV+F F L+ FPAGL+IYW+W+N +S++QQA IM+ +G ++ L D L+S K Sbjct: 564 PVIFTFMLAHFPAGLVIYWAWNNTLSVIQQAYIMRRNGVKVELWDNLKSAVVK 616 >gi|316932100|ref|YP_004107082.1| membrane protein insertase [Rhodopseudomonas palustris DX-1] gi|315599814|gb|ADU42349.1| membrane protein insertase, YidC/Oxa1 family [Rhodopseudomonas palustris DX-1] Length = 625 Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust. Identities = 243/615 (39%), Positives = 355/615 (57%), Gaps = 46/615 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV----------------- 43 M N N +A+ LS +++ WQ F P++E+ ++ Q Sbjct: 1 MSDNRNTILAVVLSGLVLLGWQYFINIPQMEKQRAAQQAQQAQQQPQTTSPGTAPSGTPS 60 Query: 44 -----------KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 P+ + AA R AL+ +PR++++ L GSI LKGA+ DDL Sbjct: 61 ATPAPGTPSAPGAPSPANPQAAATPTVSREAALAATPRIKVETTQLSGSIALKGARIDDL 120 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILT 151 L Y V SP + L SPS + Y+AE +V A N++LP+ NTVW LT Sbjct: 121 ALTQYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGANVKLPDHNTVWTQEGSGALT 180 Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 P P+ L + N + F R I++D+ YLF + D VTN + P I RH Sbjct: 181 PANPVTLKWDNGEGLTFRRQIAVDDRYLFTVKDDVTNTGAAPVTLYPFALISRHGTPHVE 240 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + EG I LG+ L E YS I+++ F +N WLGI+DKYWAS +P Sbjct: 241 GYYILHEGLIGYLGEHGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDNTAQL 300 Query: 272 HSQFKYLSDGH-ARYQAKFSANEITILPGKSITTTNFLFAGAKE---------FPTIHHY 321 ++F G+ YQ + + T+ G +++ LFAGAKE F + Y Sbjct: 301 QARFSANKAGNVTTYQTDYLEDARTVPIGGTVSANARLFAGAKEARVVGINFPFAGLGGY 360 Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 ++ L + F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV +KL+F PLA K Sbjct: 361 DRQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLIKLIFLPLANK 420 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Y S A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC PILLQIPVFF Sbjct: 421 SYASMAKMKAIQPQLLALKERHPDDKVKQ-QQEMMEIYRKEKINPVAGCLPILLQIPVFF 479 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPI 495 ++YKV+ +++EMRHAPF+GWI DL+AADPTN+F LFG++P+ L ++ +G WP+ Sbjct: 480 SLYKVLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLIPYDPTAIPVLGHYLVLGAWPL 539 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 +M +M+ QMK++P P D Q MI WMPV+F F L+ FPAGL+IYW+W+N++S++QQA Sbjct: 540 VMGFTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNLLSVIQQAY 599 Query: 556 IMKMHGAEIGLIDRL 570 IM+ +G ++ L D L Sbjct: 600 IMRRNGVKVELFDNL 614 >gi|15603927|ref|NP_220442.1| putative inner membrane protein translocase component YidC [Rickettsia prowazekii str. Madrid E] gi|38503265|sp|Q9ZE97|OXAA_RICPR RecName: Full=Inner membrane protein oxaA gi|3860618|emb|CAA14519.1| 60 KD INNER-MEMBRANE PROTEIN (yidC) [Rickettsia prowazekii] gi|292571645|gb|ADE29560.1| Preprotein translocase subunit YidC [Rickettsia prowazekii Rp22] Length = 560 Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust. Identities = 251/560 (44%), Positives = 355/560 (63%), Gaps = 11/560 (1%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN---QVDNSYAAVLIDDRA 62 N A+ LS+ I++ WQ F+V P E +++ I K N Q + A D Sbjct: 7 NLIAAVVLSLSIIFGWQYFFVKP---EQKKQQQRIAMHKSENLNKQKLKALAEPASDIAV 63 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 Q S R+++++ SL GSI LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFA Sbjct: 64 QEASQVQRIKIESESLTGSIALKGLRFDDLILKKYKQDLSQNSPAVRLFSPANTENAYFA 123 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 E+ VS N+++LPNSNTVWN S ++L+P P+ L + N + I F TI++D++YLF I Sbjct: 124 EIGLVSNLNSVKLPNSNTVWNSDS-EVLSPEKPVNLFWINEDGIKFLVTITVDKNYLFTI 182 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 T+ NNS ++ G I R + +G I + D++L E Y DI+ Sbjct: 183 EQTIINNSDKELPVQSYGLINRKYISLEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKS 241 Query: 243 SNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGK 300 + F S W+GI+DKYW S IP K + + S F Y L G RYQ F + I PG+ Sbjct: 242 TKFALSKVDWIGITDKYWLSSLIPDKSSRYSSNFNYALKQGTERYQVDFISPVQVIKPGE 301 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 +++ + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNF Sbjct: 302 NLSIKSRIFAGAKKVDLLDEYEKSYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNF 361 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 GI+I++ TV +KLL F LA K Y S MKN+QP+ID ++ + ++ Q+ M LYK Sbjct: 362 GISILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYNNDKARLNQEIM-ALYK 420 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL++ DPT IF LFG+L Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFFGWIKDLSSPDPTTIFNLFGLL 480 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 PF P F+ +G WPI+M+++MF+ KMSP AD QA ++ +MP++F+F SSFP GL+I Sbjct: 481 PFAPPSFLMIGAWPILMAITMFLHQKMSPELADPIQAQVMKFMPLIFLFMFSSFPVGLLI 540 Query: 541 YWSWSNVISIVQQAVIMKMH 560 YWSW+N++SI+QQ I K + Sbjct: 541 YWSWNNILSIIQQYYINKFN 560 >gi|51473293|ref|YP_067050.1| putative inner membrane protein translocase component YidC [Rickettsia typhi str. Wilmington] gi|81692326|sp|Q68XS4|OXAA_RICTY RecName: Full=Inner membrane protein oxaA gi|51459605|gb|AAU03568.1| 60 kDa inner membrane protein [Rickettsia typhi str. Wilmington] Length = 558 Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust. Identities = 247/558 (44%), Positives = 355/558 (63%), Gaps = 9/558 (1%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN-QVDNSYAAVLIDDRAQA 64 N AI LS+ I++ WQ F + P E +++ + K N + + A + Q Sbjct: 7 NLIAAIVLSLSIIFGWQYFVIKP---EQKKQQQRMAIYKSENLKKQKALAEHTSNITVQE 63 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 R+++++ SL GSI LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ Sbjct: 64 AGQVQRIKIESESLTGSIALKGLRFDDLILKKYKQDLSQNSPAVRLFSPANTENAYFAEI 123 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 VS ++++LPNSNTVWN S ++L+P P+ L + N + I F TI++D++YLF I Sbjct: 124 GLVSNLSSVKLPNSNTVWNSDS-EVLSPEKPVNLFWVNEDGIKFLVTITVDKNYLFTIEQ 182 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 T+ NNS ++ G I R + +G I + D++L E Y DI+ + Sbjct: 183 TIINNSDKELPVQAYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDQKSAK 241 Query: 245 FHESN-SWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSI 302 F S W+GI+DKYW S IP K +S+ + F Y L G RYQ F + I PGK++ Sbjct: 242 FALSKVDWIGIADKYWLSSLIPDKSSSYSANFNYALKQGAERYQVDFISPVQVIKPGKNL 301 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG+ Sbjct: 302 SIKSRIFAGAKKVDLLDEYEKSYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGV 361 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ TV +KLL F LA K Y S MKN+QP+ID ++ + ++ Q+ M LYK Sbjct: 362 SILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYNNDKARLNQEIM-ALYKKS 420 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP+AGC PIL+QIPVFF+IYKV+ +++EMRHAPF+GWIKDL++ DPT IF LFG+LPF Sbjct: 421 KVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRHAPFYGWIKDLSSPDPTTIFNLFGLLPF 480 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P F+ +G WPI+M+++MF+ KMSP AD QA ++ +MP++F+F SSFP GL+IYW Sbjct: 481 APPSFLMIGAWPILMAITMFLHQKMSPELADPIQAQVMKFMPLIFLFMFSSFPVGLLIYW 540 Query: 543 SWSNVISIVQQAVIMKMH 560 SW+N++SI+QQ I K + Sbjct: 541 SWNNILSIIQQYYINKFN 558 >gi|312113264|ref|YP_004010860.1| membrane protein insertase, YidC/Oxa1 family [Rhodomicrobium vannielii ATCC 17100] gi|311218393|gb|ADP69761.1| membrane protein insertase, YidC/Oxa1 family [Rhodomicrobium vannielii ATCC 17100] Length = 711 Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust. Identities = 248/606 (40%), Positives = 352/606 (58%), Gaps = 46/606 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ-VDNSYAAVLID 59 M+ N N+ +AIALS+ ++ WQ Y+ P ++ + Q Q D + I Sbjct: 1 MDNNRNFIIAIALSLSVLLGWQFLYMKPASDKARQQAIEAQQQTAGEQGTDPTVGGAAIP 60 Query: 60 DRAQ----------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 RA AL+ + R+ SL GSINLKG DD+ L+ Y V Sbjct: 61 PRASSVIPVPTTPKFASREAALAATQRIAFDTSSLTGSINLKGGSVDDVTLKEYRQTVDP 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 NSP VTLLSP+ + Y+A + S +I +P +TVW L P P+ L + N Sbjct: 121 NSPPVTLLSPAGSPEPYYAYTGWYSDQADISVPGPDTVWKQQGTGALAPGKPVTLTWDNG 180 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFG---VQEG 219 ++F+R I+LDEHY+F I DTV N + + PR + R ++P TN FG + EG Sbjct: 181 KGLVFKRAITLDEHYMFTITDTVENKTGKPVTLRPRAEVARLYEP---TNLFGYSVLHEG 237 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFH---------------ESNSWLGISDKYWASVFI 264 I + D L E YS S+I NF + WLG +D+YWA+V + Sbjct: 238 LIGLFKDAGLKELTYS----SAIKNFDPAADNGKGVSKEIISDKGGWLGFTDQYWAAVLV 293 Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 P + ++ + +FS N +T+ G S T TN LFAGAK+ I Y D Sbjct: 294 PDQSKPLTARL--FGTPQKDFFVEFSENPVTVATGASETFTNKLFAGAKKVVLIEQYMAD 351 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 I RF+ L+DWGWF F+ +P++ L+++ Y VGNFGIAI+LTTV VK+LFFPLA K Y Sbjct: 352 DKIDRFDKLVDWGWFPFLTQPLYFLLNWLYLHVGNFGIAILLTTVLVKVLFFPLANKSYS 411 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 + +K +QP++ +++E+FK Q Q AM+ LYK +NP AGC PIL+QIPVFFA+Y Sbjct: 412 AMNKLKMLQPEMKKIQERFKDDK-QRQQHAMMTLYKKEKVNPAAGCLPILVQIPVFFALY 470 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 KV+ +S+EMRHAPF+GWI DL+A DPTNIFTLFG++P+ P FM +G P+IM SM++Q Sbjct: 471 KVLLVSIEMRHAPFYGWIHDLSAPDPTNIFTLFGLIPWTPPHFMMLGALPLIMGCSMWLQ 530 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M+++P P D Q I WMPV+F F L+ F AGLI+YW+W+N+++ QQA+IMK + Sbjct: 531 MRLNPTPPDPIQQKIFAWMPVLFTFMLAPFQAGLILYWTWNNILTFAQQALIMKRQDKNM 590 Query: 565 GLIDRL 570 L++++ Sbjct: 591 NLLEQI 596 >gi|157803235|ref|YP_001491784.1| putative inner membrane protein translocase component YidC [Rickettsia canadensis str. McKiel] gi|166977408|sp|A8EXB6|OXAA_RICCK RecName: Full=Inner membrane protein oxaA gi|157784498|gb|ABV72999.1| putative inner membrane protein translocase component YidC [Rickettsia canadensis str. McKiel] Length = 560 Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust. Identities = 245/560 (43%), Positives = 354/560 (63%), Gaps = 11/560 (1%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL---IDDRA 62 N AI LS+ I++ WQ F V P E +++ I K N A++ D Sbjct: 7 NLIAAIVLSLSIIFGWQYFVVKP---EHKKQQQQIAMQKAENLKKQKLKALIKPASDLVV 63 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 Q + R+++++ SL GSI+LKG +FDDL L+ Y D+S NS V L SP+NT+NAYFA Sbjct: 64 QEANQVQRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSTEVRLFSPANTENAYFA 123 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 E+ VS ++++LPN++T+WN G+IL+P P+ L + N + + F TI+LDE+YLF + Sbjct: 124 EIGLVSNLSSVKLPNNDTIWNS-DGEILSPEKPVNLFWVNEDGVKFLVTITLDENYLFTV 182 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 T+ NNS ++ G I R + +G I + +++L E Y DI+ Sbjct: 183 EQTIVNNSDKELPVQSYGLINRKYIAVEKAVNILHQGPIGCI-NENLKEYSYDDIKDKKS 241 Query: 243 SNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGK 300 F S W+G++DKYW S IP K +++ S F Y L+ G RYQ F + I G+ Sbjct: 242 EKFVASKVDWIGMTDKYWLSSLIPDKSSNYSSNFNYALTQGVERYQVDFISPVQIIKSGE 301 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + + T+ +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNF Sbjct: 302 NFSITSRIFAGAKKVDLLDKYEKQYGIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNF 361 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 GI+I++ TV +KLL F LA K Y S MKN+QP+ID ++ + ++ Q+ M LYK Sbjct: 362 GISILIVTVIIKLLMFTLANKSYCSMKKMKNLQPEIDRIKNLYGDDKARLNQEIM-ALYK 420 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG L Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGFL 480 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 PF P F+ +G WPI+M+++MF+Q +MSP PAD QA ++ +MP++F+ SSFP GL+I Sbjct: 481 PFSPPSFLMIGAWPILMAITMFLQQRMSPEPADPVQAQVMKFMPLIFLVMFSSFPVGLLI 540 Query: 541 YWSWSNVISIVQQAVIMKMH 560 YWSW+N++SI+QQ I K + Sbjct: 541 YWSWNNILSIIQQYYINKFN 560 >gi|34580968|ref|ZP_00142448.1| 60 kD inner-membrane protein [Rickettsia sibirica 246] gi|28262353|gb|EAA25857.1| 60 kD inner-membrane protein [Rickettsia sibirica 246] Length = 560 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 246/553 (44%), Positives = 356/553 (64%), Gaps = 13/553 (2%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA----QALSMSP 69 S+ I++ WQ F V P E +++ I TV++ + L++ QA S Sbjct: 15 SLSIIFGWQYFVVKP---EQKKQQQQI-TVQKAENLKKQQLKALVEPATGIVVQAESQVQ 70 Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 R+++++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ VS Sbjct: 71 RIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSN 130 Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNN 189 ++++LPN++T+WN S +IL+P P+ L + N + + F TI++DE+YLF I T+ NN Sbjct: 131 LSSVKLPNNDTIWNSDS-EILSPEKPVHLFWVNEDGVKFLVTIAVDENYLFTIEQTIVNN 189 Query: 190 SIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN 249 S ++ G I R + +G I + D++L E Y DI+ F S Sbjct: 190 SNKELPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEKFAASK 248 Query: 250 -SWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNF 307 W+GI+DKYW S IP K +++ S F Y L G RYQ F + I PG++ + + Sbjct: 249 VDWIGITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENFSIKSR 308 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ Sbjct: 309 IFAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIV 368 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 TV +KLL F LA K Y S MKN+QP+ID ++ + ++ Q+ M LYK +NP+ Sbjct: 369 TVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIM-ALYKKEKVNPV 427 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A+DPT IF LFG+LPF P F Sbjct: 428 AGCLPILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSASDPTTIFNLFGLLPFSPPSF 487 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + +G WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N+ Sbjct: 488 LMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNI 547 Query: 548 ISIVQQAVIMKMH 560 +SI+QQ I K + Sbjct: 548 LSIIQQYYINKFN 560 >gi|157964113|ref|YP_001498937.1| putative inner membrane protein translocase component YidC [Rickettsia massiliae MTU5] gi|166977409|sp|A8F0F4|OXAA_RICM5 RecName: Full=Inner membrane protein oxaA gi|157843889|gb|ABV84390.1| Preprotein translocase subunit YidC [Rickettsia massiliae MTU5] Length = 560 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 245/566 (43%), Positives = 356/566 (62%), Gaps = 23/566 (4%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPR---------IEEMNNERKNIQTVKQPNQVDNSYAAV 56 N AI LS+ I++ WQ F V P +++ N +K +Q + + Sbjct: 7 NLVAAIILSLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKK-----QQLKALVEPATGI 61 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 ++ + +Q R+++++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SPSNT Sbjct: 62 VVQEESQI----QRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPSNT 117 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 +NAYFAE+ VS ++++LPN++T+WN S +IL+P P+ L + N + + F TI++DE Sbjct: 118 ENAYFAEIGLVSNLSSVKLPNNDTIWNSDS-EILSPEKPVHLFWVNEDGVKFLVTITVDE 176 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 +YLF I T+ N S ++ G I R + +G I + D++L E Y D Sbjct: 177 NYLFTIEQTIVNYSDKELPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDD 235 Query: 237 IEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEI 294 I+ F S W+GI+DKYW S IP K +++ S F Y L G RYQ F + Sbjct: 236 IKDKKSEKFAASKVDWIGITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQ 295 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I PG++ + + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY Sbjct: 296 IIKPGENFSIKSRIFAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFY 355 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 VGNFG++I++ TV +KLL F LA K Y S MKN+QP+ID ++ + ++ Q+ Sbjct: 356 GYVGNFGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEI 415 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M LYK +NP+AGC PIL+QIPVFF+IYKV+ +++EMR PF+GWIKDL+A DPT IF Sbjct: 416 M-ALYKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQTPFYGWIKDLSAPDPTTIF 474 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 LFG+LPF P F+ +G WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSF Sbjct: 475 NLFGLLPFSPPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSF 534 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMH 560 P GL+IYWSW+N++SI+QQ I K + Sbjct: 535 PVGLLIYWSWNNILSIIQQYYINKFN 560 >gi|15891997|ref|NP_359711.1| putative inner membrane protein translocase component YidC [Rickettsia conorii str. Malish 7] gi|38503126|sp|Q92JJ3|OXAA_RICCN RecName: Full=Inner membrane protein oxaA gi|15619112|gb|AAL02612.1| 60 kD inner-membrane protein [Rickettsia conorii str. Malish 7] Length = 560 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 242/558 (43%), Positives = 355/558 (63%), Gaps = 23/558 (4%) Query: 14 SVIIVYAWQNFYVYPR---------IEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 S+ I++ WQ F V P +++ N +K +Q + +++ + +Q Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKK-----QQLKALVEPATGIVVQEESQV 69 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 R+++++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ Sbjct: 70 ----QRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEV 125 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 VS ++++LPN++T+WN S +IL+P P+ L + N + + F TI++DE+YLF I Sbjct: 126 GLVSNLSSVKLPNNDTIWNSDS-EILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQ 184 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 T+ NNS ++ G I R + +G I + D++L E Y DI+ Sbjct: 185 TIVNNSDKELPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEK 243 Query: 245 FHESN-SWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSI 302 F S W+GI+DKYW S IP K +++ S F Y L G RYQ F + I PG++ Sbjct: 244 FAASKVDWIGITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENF 303 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG+ Sbjct: 304 SIKSRIFAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGV 363 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ TV +KLL F LA K Y S MKN+QP+ID ++ + ++ Q+ M LYK Sbjct: 364 SILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIM-ALYKKE 422 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A+DPT IF LFG+LPF Sbjct: 423 KVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSASDPTTIFNLFGLLPF 482 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P F+ +G WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYW Sbjct: 483 SPPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYW 542 Query: 543 SWSNVISIVQQAVIMKMH 560 SW+N++SI+QQ I K + Sbjct: 543 SWNNILSIIQQYYINKFN 560 >gi|157827949|ref|YP_001494191.1| putative inner membrane protein translocase component YidC [Rickettsia rickettsii str. 'Sheila Smith'] gi|166977410|sp|A8GQK8|OXAA_RICRS RecName: Full=Inner membrane protein oxaA gi|157800430|gb|ABV75683.1| putative inner membrane protein translocase component YidC [Rickettsia rickettsii str. 'Sheila Smith'] Length = 560 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 243/558 (43%), Positives = 354/558 (63%), Gaps = 23/558 (4%) Query: 14 SVIIVYAWQNFYVYPR---------IEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 S+ I++ WQ F V P +++ N +K +Q + +++ + +Q Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKK-----QQLKALVEPATGIVVQEESQV 69 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 R+++++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ Sbjct: 70 ----QRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEV 125 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 VS ++++LPN++T+WN S +IL+P P+ L + N + + F TI++DE+YLF I Sbjct: 126 GLVSNLSSVKLPNNDTIWNSDS-EILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQ 184 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 T+ NNS ++ G I R + +G I + D++L E Y DI+ Sbjct: 185 TIVNNSDKELPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEK 243 Query: 245 FHESN-SWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSI 302 F S W+GI+DKYW S IP K +++ S F Y L G RYQ F + I PGK+ Sbjct: 244 FAASKVDWIGITDKYWLSSLIPDKSSNYSSNFNYALKQGIERYQVDFISPVQIIKPGKNF 303 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG+ Sbjct: 304 SIKSRIFAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGV 363 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ TV +KLL F LA K Y S MKN+QP+ID ++ + ++ Q+ M LYK Sbjct: 364 SILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIM-ALYKKE 422 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF Sbjct: 423 KVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPF 482 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P F+ +G WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYW Sbjct: 483 APPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYW 542 Query: 543 SWSNVISIVQQAVIMKMH 560 SW+N++SI+QQ I K + Sbjct: 543 SWNNILSIIQQYYINKFN 560 >gi|296444656|ref|ZP_06886620.1| membrane protein insertase, YidC/Oxa1 family [Methylosinus trichosporium OB3b] gi|296257924|gb|EFH04987.1| membrane protein insertase, YidC/Oxa1 family [Methylosinus trichosporium OB3b] Length = 610 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 236/606 (38%), Positives = 350/606 (57%), Gaps = 36/606 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIE-EMNNERKNIQTVKQPNQVDNSYAAV---- 56 E N +A LS++ + AW FY +P++E E + + I+ Q A Sbjct: 3 EYTKNVIIAAGLSMLFIGAWDYFYAFPKLEQERQTQAEQIKKTAQAQAPAARKPAAPETK 62 Query: 57 ------------------LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 + R AL+ SPR+ + PS+ GSI L G + DD++L+ YH Sbjct: 63 QAQAPTATQQQPAAAQKPVKKTREAALAESPRIAIDTPSIAGSIALVGGRIDDVSLKNYH 122 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 V SPI+ LLSP N + Y+AE +++ A + LPN+ T+W L+ P+ L Sbjct: 123 ETVDPKSPIIVLLSPENGPDPYYAETGFLA-AGDAALPNAQTLWT-ADRTTLSAAQPVTL 180 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 + N ++F+R I++D+ Y+F + D+V N++ + R+ R + E Sbjct: 181 SYDNGQGLVFKRKIAVDDRYMFTVADSVENHADKPVTLYSYMRVARVGIPAGAGYAALHE 240 Query: 219 GFIAVLGDKSLVEQKYSDIEKS--SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 GFI V+G+ + E KY +EK + + WLG ++KYWA+V +P ++ F ++F Sbjct: 241 GFIGVIGESGVQEMKYEKVEKEPHATKTLSGTGGWLGFTEKYWAAVAVPQQDKPFEARFS 300 Query: 277 YLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 G + YQA +TI PG S T+ +FAGAK + Y+ I F++LID Sbjct: 301 ATGAGTVKAYQADTVGAPLTIQPGASGETSQRIFAGAKVVDMLDAYQAQ-GIEHFDLLID 359 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWFYF+ +PMF L+ ++++GNFG+AI+ TV VK+ F PLA K Y + A MK +QPK Sbjct: 360 WGWFYFLTRPMFRLIDNLFHVLGNFGLAILAVTVLVKIAFLPLANKSYQAVAKMKEVQPK 419 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I L+EK+ Q L + + L+K INP GC P+LLQIPVFF++YKV+ I++EMRH Sbjct: 420 IQALKEKYGDDK-QTLSREQMALFKREKINPAGGCLPMLLQIPVFFSLYKVLVITIEMRH 478 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSP 509 APF+GWIKDL+A DPTNIF LFG++PF F+ +G+WPIIM +M++QMKM+P Sbjct: 479 APFYGWIKDLSAPDPTNIFNLFGLIPFDPTQIPLFGSFLWLGVWPIIMGFTMWMQMKMNP 538 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D+ Q + WMPV+F F+L SF +GL+IYWSW+N++S+ QQ IM+ G + L D Sbjct: 539 EPTDEIQRIAFAWMPVIFTFSLGSFASGLVIYWSWNNILSVTQQWYIMRRAGVKFELWDN 598 Query: 570 LRSTFS 575 L+ TF Sbjct: 599 LKKTFD 604 >gi|229586285|ref|YP_002844786.1| putative inner membrane protein translocase component YidC [Rickettsia africae ESF-5] gi|259515719|sp|C3PM83|OXAA_RICAE RecName: Full=Membrane protein oxaA gi|228021335|gb|ACP53043.1| Preprotein translocase subunit YidC [Rickettsia africae ESF-5] Length = 560 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 243/558 (43%), Positives = 354/558 (63%), Gaps = 23/558 (4%) Query: 14 SVIIVYAWQNFYVYPR---------IEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 S+ I++ WQ F V P +++ N +K +Q V +++ + +Q Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKK-----QQLKAVVEPATGIVVQEESQV 69 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 R+++++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ Sbjct: 70 ----QRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEV 125 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 VS ++++LPN++T+WN S +IL+P P+ L + N + + F TI++DE+YLF I Sbjct: 126 GLVSNLSSVKLPNNDTIWNSDS-EILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQ 184 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 T+ NNS ++ G I R + +G I + D++L E Y DI+ Sbjct: 185 TIVNNSDKELPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEK 243 Query: 245 FHESN-SWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSI 302 F S W+GI+DKYW S IP K +++ S F Y L G RYQ F + I PG+ Sbjct: 244 FVASKVDWIGITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGEDF 303 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG+ Sbjct: 304 SIKSRIFAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGV 363 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ TV +KLL F LA K Y S MKN+QP+ID ++ + ++ Q+ M LYK Sbjct: 364 SILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIM-ALYKKE 422 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A+DPT IF LFG+LPF Sbjct: 423 KVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSASDPTTIFNLFGLLPF 482 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P F+ +G WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYW Sbjct: 483 SPPLFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYW 542 Query: 543 SWSNVISIVQQAVIMKMH 560 SW+N++SI+QQ I K + Sbjct: 543 SWNNILSIIQQYYINKFN 560 >gi|67458523|ref|YP_246147.1| putative inner membrane protein translocase component YidC [Rickettsia felis URRWXCal2] gi|75537010|sp|Q4UN76|OXAA_RICFE RecName: Full=Inner membrane protein oxaA gi|67004056|gb|AAY60982.1| Preprotein translocase subunit YidC [Rickettsia felis URRWXCal2] Length = 560 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 244/552 (44%), Positives = 352/552 (63%), Gaps = 11/552 (1%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL---IDDRAQALSMSPR 70 S+ I++ WQ F V P E +++ I K N A++ D Q S R Sbjct: 15 SLSIIFGWQYFVVKP---EQKKQQQQIAVQKAENLKKQQLKALVEPATDIVVQEESGVQR 71 Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 +++++ SL GSI+LKG +FDDL L+ Y D+S+NSP V L SP+NT+NAYFAE+ VS Sbjct: 72 IKIESESLTGSISLKGLRFDDLILKKYKQDLSNNSPEVRLFSPANTENAYFAEIGLVSNL 131 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190 ++++LPN++T+WN S +IL+P P+ L + N + + F TI++DE+YLF I T+ NNS Sbjct: 132 SSVKLPNNDTIWNSDS-EILSPEKPVNLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNS 190 Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN- 249 ++ G I R + +G I + D++L E Y DI+ F S Sbjct: 191 DKELPIQSYGLINRKYTAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEKFAASKV 249 Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFL 308 W+GI+DKYW S IP K +++ S F Y L G RYQ F + I PG++ + + + Sbjct: 250 DWIGITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENFSIKSRI 309 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ T Sbjct: 310 FAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVT 369 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 V +KLL F LA K Y S MKN+QP+ID ++ + ++ Q+ M LYK +NP+A Sbjct: 370 VIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIM-ALYKKEKVNPVA 428 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC PIL+QIP+FF+IYKV+ +++EMR PF+GWIKDL+A DPT IF LFG+LPF P F+ Sbjct: 429 GCLPILVQIPLFFSIYKVLYVTIEMRQVPFYGWIKDLSAPDPTTIFNLFGLLPFSPPSFL 488 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 +G WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++ Sbjct: 489 MIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNIL 548 Query: 549 SIVQQAVIMKMH 560 SI+QQ I K + Sbjct: 549 SIIQQYYINKFN 560 >gi|238650515|ref|YP_002916367.1| putative inner membrane protein translocase component YidC [Rickettsia peacockii str. Rustic] gi|259515722|sp|C4K168|OXAA_RICPU RecName: Full=Inner membrane protein oxaA gi|238624613|gb|ACR47319.1| putative inner membrane protein translocase component YidC [Rickettsia peacockii str. Rustic] Length = 560 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 241/558 (43%), Positives = 354/558 (63%), Gaps = 23/558 (4%) Query: 14 SVIIVYAWQNFYVYPR---------IEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 S+ I++ WQ F V P +++ N +K +Q + +++ + +Q Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKK-----QQLKALVEPATGIVVQEESQV 69 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 R+++++ SL GS++LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ Sbjct: 70 ----QRIKIESESLTGSVSLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEV 125 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 VS ++++LPN++T+WN S +IL+P P+ L + N + + F TI++DE+YLF I Sbjct: 126 GLVSNLSSVKLPNNDTIWNSDS-EILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQ 184 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 T+ NNS ++ G I R + +G I + D++L E Y DI+ Sbjct: 185 TIVNNSDKELPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEK 243 Query: 245 FHESN-SWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSI 302 F S W+GI+DKYW S IP K +++ S F Y L G RYQ F + I PG++ Sbjct: 244 FAASKVDWIGITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENF 303 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG+ Sbjct: 304 SIKSRIFAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGV 363 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ TV +KLL F LA K Y S MKN+QP+ID ++ + ++ Q+ M LYK Sbjct: 364 SILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIM-ALYKKE 422 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF Sbjct: 423 KVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPF 482 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P F+ +G WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYW Sbjct: 483 SPPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYW 542 Query: 543 SWSNVISIVQQAVIMKMH 560 SW+N++SI+QQ I K + Sbjct: 543 SWNNILSIIQQYYINKFN 560 >gi|91204826|ref|YP_537181.1| putative inner membrane protein translocase component YidC [Rickettsia bellii RML369-C] gi|157826396|ref|YP_001495460.1| putative inner membrane protein translocase component YidC [Rickettsia bellii OSU 85-389] gi|122426155|sp|Q1RKM2|OXAA_RICBR RecName: Full=Inner membrane protein oxaA gi|166977407|sp|A8GUC7|OXAA_RICB8 RecName: Full=Inner membrane protein oxaA gi|91068370|gb|ABE04092.1| Preprotein translocase subunit YidC [Rickettsia bellii RML369-C] gi|157801700|gb|ABV78423.1| putative inner membrane protein translocase component YidC [Rickettsia bellii OSU 85-389] Length = 559 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 243/559 (43%), Positives = 356/559 (63%), Gaps = 11/559 (1%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNN--ERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N AI LS+ I++ WQ F V P+ ++ + + +K+ V++ + +Q Sbjct: 7 NLVAAIVLSLGIIFGWQYFIVKPQQQKQQQQIALQKAKDLKKKESAQLEATPVIVQEASQ 66 Query: 64 ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE 123 A PR+++ + +L GSI+LKG +FDDL L+ Y D+S NSP V L SPS+TK+AYFAE Sbjct: 67 A----PRIKIDSNALSGSISLKGLRFDDLILKKYKQDLSENSPEVVLFSPSDTKDAYFAE 122 Query: 124 LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIV 183 + +VS ++++LPN+ T+WN S +ILTP P+ L + N + + F I++DE+YLF I Sbjct: 123 IGWVSNLSSVKLPNNETIWNSDS-EILTPEKPVNLFWVNEDGVKFLVAITVDENYLFTIE 181 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 T+ NNS ++ G I R + +G I + D++L E Y DI+ Sbjct: 182 QTIVNNSNQELPVQSYGLINRKYTAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSE 240 Query: 244 NFHESN-SWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKS 301 F S W+GI+DKYW + IP K +++ S F Y + RYQ F + + PG++ Sbjct: 241 KFSASKVDWIGITDKYWLTSLIPDKSSNYSSNFNYAVKQEVERYQVDFISPVQIVKPGEN 300 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 + LFAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG Sbjct: 301 FSIKGRLFAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYKYVGNFG 360 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 I+I++ TV +KLL F LA K Y S MKN+QP+I+ ++ + ++ Q+ M LYK Sbjct: 361 ISILIVTVIIKLLMFTLANKSYRSMKRMKNLQPEINRIKNLYGDDKARLNQEIM-ALYKK 419 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT+IF LFG+L Sbjct: 420 EKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTSIFNLFGLLH 479 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 F LP F+ +G WPI+M+++MF+Q +MSP PAD QA ++ +MP+VF+ SSFPAGL+IY Sbjct: 480 FSLPSFLMIGAWPILMAITMFLQQRMSPEPADPVQAQVMKFMPLVFLVMFSSFPAGLLIY 539 Query: 542 WSWSNVISIVQQAVIMKMH 560 WSW+N++SI+QQ I K+ Sbjct: 540 WSWNNILSIIQQYYINKLD 558 >gi|192289066|ref|YP_001989671.1| inner membrane protein translocase component YidC [Rhodopseudomonas palustris TIE-1] gi|192282815|gb|ACE99195.1| 60 kDa inner membrane insertion protein [Rhodopseudomonas palustris TIE-1] Length = 622 Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust. Identities = 249/619 (40%), Positives = 359/619 (57%), Gaps = 43/619 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK----------NIQTVKQPNQVD 50 M N N +A+ LS +++ WQ F+ P++E+ ++ QT + Sbjct: 1 MSDNRNTILAVVLSGLVLLGWQYFFNIPQMEKQRAAQQAQQQAAKQQAETQTPGAASPAA 60 Query: 51 ---------------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 AA R AL+ PR++++ P L GSI LKGA+ DDL L Sbjct: 61 APAAPGAPGSAPASPQQQAAAPTVSREAALAAGPRIKVETPRLSGSIALKGARIDDLALM 120 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTT 154 Y V SP + L SPS + Y+AE +V A +++LP+ NT+W LTP Sbjct: 121 QYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGASVKLPDHNTLWEQEGTGALTPAN 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 P+ L + N + F R I++D+ YLF + D VTN + P I RH + Sbjct: 181 PVTLKWDNGEGLTFRRQITVDDRYLFTVKDDVTNTGGAPVTLYPFALISRHGTPHVEGYY 240 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 + EG I LGD+ L E YS I+++ F +N WLGI+DKYWAS +P ++ Sbjct: 241 ILHEGLIGYLGDQGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDTSAQLQAR 300 Query: 275 FKYLSDGH-ARYQAKFSANEITILPGKSITTTNFLFAGAKE---------FPTIHHYEKD 324 F G+ YQ + + T+ G ++T LFAGAKE F + Y++ Sbjct: 301 FSANKVGNVTTYQTDYLEDARTVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYDRQ 360 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 L + F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV VKLLF PLA K Y Sbjct: 361 LGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLLFLPLANKSYA 420 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC PILLQIPVFF++Y Sbjct: 421 SMAKMKAIQPQLAALKERHPDDKVKQ-QQEMMEIYRKEKINPVAGCLPILLQIPVFFSLY 479 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMS 498 KV+ +++EMRHAPF+GWI DL+A DPTNIF LFG++P+ L ++ +G WP++M Sbjct: 480 KVLFVTIEMRHAPFFGWIHDLSAPDPTNIFNLFGLIPYDPTAIPVLGHYLVLGAWPLVMG 539 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +M+ QMK++P P D Q MI WMPV+F F L+ FPAGL+IYW+W+N +S+ QQA IM+ Sbjct: 540 FTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVAQQAFIMQ 599 Query: 559 MHGAEIGLIDRLRSTFSKN 577 +G ++ L D LR++F+K Sbjct: 600 RNGVKVELWDNLRTSFAKK 618 >gi|165932637|ref|YP_001649426.1| membrane protein insertase [Rickettsia rickettsii str. Iowa] gi|189036358|sp|B0BVZ4|OXAA_RICRO RecName: Full=Inner membrane protein oxaA gi|165907724|gb|ABY72020.1| 60 kDa inner membrane protein [Rickettsia rickettsii str. Iowa] Length = 560 Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust. Identities = 242/558 (43%), Positives = 353/558 (63%), Gaps = 23/558 (4%) Query: 14 SVIIVYAWQNFYVYPR---------IEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 S+ I++ WQ F V P +++ N +K +Q + +++ + +Q Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKK-----QQLKALVEPATGIVVQEESQV 69 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 R+++++ SL GSI+LKG +FDDL L+ Y D+S NS V L SP+NT+NAYFAE+ Sbjct: 70 ----QRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSSEVRLFSPANTENAYFAEV 125 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 VS ++++LPN++T+WN S +IL+P P+ L + N + + F TI++DE+YLF I Sbjct: 126 GLVSNLSSVKLPNNDTIWNSDS-EILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQ 184 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 T+ NNS ++ G I R + +G I + D++L E Y DI+ Sbjct: 185 TIVNNSDKELPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEK 243 Query: 245 FHESN-SWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSI 302 F S W+GI+DKYW S IP K +++ S F Y L G RYQ F + I PGK+ Sbjct: 244 FAASKVDWIGITDKYWLSSLIPDKSSNYSSNFNYALKQGIERYQVDFISPVQIIKPGKNF 303 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG+ Sbjct: 304 SIKSRIFAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGV 363 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ TV +KLL F LA K Y S MKN+QP+ID ++ + ++ Q+ M LYK Sbjct: 364 SILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIM-ALYKKE 422 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF Sbjct: 423 KVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPF 482 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P F+ +G WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYW Sbjct: 483 APPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYW 542 Query: 543 SWSNVISIVQQAVIMKMH 560 SW+N++SI+QQ I K + Sbjct: 543 SWNNILSIIQQYYINKFN 560 >gi|239946952|ref|ZP_04698705.1| inner membrane protein OxaA [Rickettsia endosymbiont of Ixodes scapularis] gi|239921228|gb|EER21252.1| inner membrane protein OxaA [Rickettsia endosymbiont of Ixodes scapularis] Length = 560 Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust. Identities = 242/552 (43%), Positives = 350/552 (63%), Gaps = 11/552 (1%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL---IDDRAQALSMSPR 70 S+ I++ WQ F V P E +++ I K N A++ D Q + R Sbjct: 15 SLSIIFGWQYFVVKP---EQKKQQQQIAVQKAENLKKQQLKALVEPATDIVVQEENQVQR 71 Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 +++++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ VS Sbjct: 72 IKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEIGLVSNL 131 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190 ++++LPN++T+WN + +IL+P + L + N + + F TI++DE+YLF I T+ NNS Sbjct: 132 SSVKLPNNDTIWNS-NSEILSPEKSVNLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNS 190 Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN- 249 ++ G I R + +G I + D++L E Y DI+ F Sbjct: 191 DKELPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEKFAAGKV 249 Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFL 308 W+GI+DKYW S IP K +++ S F Y L G RYQ F + I PG++ + + + Sbjct: 250 DWIGITDKYWLSSLIPDKSSNYSSNFNYALKQGAERYQVDFISPVQIIKPGENFSIKSRI 309 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ T Sbjct: 310 FAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVT 369 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 V +KLL F LA K Y S MKN+QP+ID ++ + ++ Q+ M LYK +NP+A Sbjct: 370 VIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIM-ALYKKEKVNPVA 428 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF P F+ Sbjct: 429 GCLPILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPFLPPSFL 488 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 +G WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++ Sbjct: 489 MIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNIL 548 Query: 549 SIVQQAVIMKMH 560 SI+QQ I K + Sbjct: 549 SIIQQYYINKFN 560 >gi|39933709|ref|NP_945985.1| putative inner membrane protein translocase component YidC [Rhodopseudomonas palustris CGA009] gi|39647556|emb|CAE26076.1| 60 kDa inner membrane protein [Rhodopseudomonas palustris CGA009] Length = 622 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 248/619 (40%), Positives = 359/619 (57%), Gaps = 43/619 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY------- 53 M N N +A+ LS +++ WQ F+ P++E+ ++ Q + + Sbjct: 1 MSDNRNTILAVVLSGLVLLGWQYFFNIPQMEKQRAAQQAQQQAAKQQAETQTPGAASPAA 60 Query: 54 ------------------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 AA R AL+ PR++++ P L GSI LKGA+ DDL L Sbjct: 61 APAAPGAPGSAPASPQQPAAAPTVSREAALAAGPRIKVETPRLSGSIALKGARIDDLALM 120 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTT 154 Y V SP + L SPS + Y+AE +V A +++LP+ NT+W LTP Sbjct: 121 QYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGASVKLPDHNTLWEQEGTGALTPAN 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 P+ L + N + F R I++D+ YLF + D VTN + P I RH + Sbjct: 181 PVTLKWDNGEGLTFRRQITVDDRYLFTVKDDVTNTGGAPVTLYPFALISRHGTPHVEGYY 240 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 + EG I LGD+ L E YS I+++ F +N WLGI+DKYWAS +P ++ Sbjct: 241 ILHEGLIGYLGDQGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDTSAQLQAR 300 Query: 275 FKYLSDGH-ARYQAKFSANEITILPGKSITTTNFLFAGAKE---------FPTIHHYEKD 324 F G+ YQ + + T+ G ++T LFAGAKE F + Y++ Sbjct: 301 FSANKVGNVTTYQTDYLEDARTVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYDRQ 360 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 L + F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV VKLLF PLA K Y Sbjct: 361 LGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLLFLPLANKSYA 420 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC PILLQIPVFF++Y Sbjct: 421 SMAKMKAIQPQLAALKERHPDDKVKQ-QQEMMEIYRKEKINPVAGCLPILLQIPVFFSLY 479 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMS 498 KV+ +++EMRHAPF+GWI DL+A DPTNIF LFG++P+ L ++ +G WP++M Sbjct: 480 KVLFVTIEMRHAPFFGWIHDLSAPDPTNIFNLFGLIPYDPTAIPVLGHYLVLGAWPLVMG 539 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +M+ QMK++P P D Q MI WMPV+F F L+ FPAGL+IYW+W+N +S+ QQA IM+ Sbjct: 540 FTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVAQQAFIMQ 599 Query: 559 MHGAEIGLIDRLRSTFSKN 577 +G ++ L D LR++F+K Sbjct: 600 RNGVKVELWDNLRTSFAKK 618 >gi|157825202|ref|YP_001492922.1| putative inner membrane protein translocase component YidC [Rickettsia akari str. Hartford] gi|166977406|sp|A8GLY9|OXAA_RICAH RecName: Full=Inner membrane protein oxaA gi|157799160|gb|ABV74414.1| putative inner membrane protein translocase component YidC [Rickettsia akari str. Hartford] Length = 560 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 236/557 (42%), Positives = 349/557 (62%), Gaps = 5/557 (0%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 N AI LS+ I++ WQ F + P ++ + + Q + D Q Sbjct: 7 NLIAAIVLSLSIIFGWQYFVIKPEQKKQQQQIAVQKAANLKKQQLKALVEPATDIVVQEE 66 Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD 125 S R+++++ SL GSI+LKG +FDDL L+ Y D+S NS V L SP+NT+++YFAE+ Sbjct: 67 SQVQRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSSDVVLFSPTNTEHSYFAEIG 126 Query: 126 YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDT 185 VS ++++LPN++T+W+ G+IL+P P+ L + N + + F TI++D++YLF I T Sbjct: 127 LVSNLSSVKLPNNDTIWSS-DGEILSPEKPVNLFWVNEDGVKFLVTITVDKNYLFTIEQT 185 Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 + NNS ++ G I R + +G I + D++L E Y DI+ F Sbjct: 186 IVNNSDKELPIQSYGLINRKYTAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEKF 244 Query: 246 HESN-SWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSIT 303 S W+GI+DKYW S IP K +++ S F Y + G +YQ F + I PG++ Sbjct: 245 AASKVDWIGITDKYWLSALIPDKSSNYSSNFNYAVKQGIEKYQVDFISPVQIIKPGENFA 304 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++ Sbjct: 305 IKSRIFAGAKKVDLLDQYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVS 364 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ TV +KLL F LA K Y S +KN+QP+ID ++ + ++ Q+ M LYK Sbjct: 365 ILIVTVIIKLLMFTLANKSYRSMKKIKNLQPEIDRIKNLYSDDKARLNQEIM-ALYKKEK 423 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+AGC PIL+QIPVFF+IYKV+ +++EMR A F+GWIKDL+A DPT IF LFG+LPF Sbjct: 424 VNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAQFYGWIKDLSAPDPTTIFNLFGLLPFS 483 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 P F+ +G WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWS Sbjct: 484 PPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWS 543 Query: 544 WSNVISIVQQAVIMKMH 560 W+N++SI+QQ I K + Sbjct: 544 WNNILSIIQQYYINKFN 560 >gi|114569009|ref|YP_755689.1| protein translocase subunit YidC [Maricaulis maris MCS10] gi|122316769|sp|Q0ASI6|OXAA_MARMM RecName: Full=Inner membrane protein oxaA gi|114339471|gb|ABI64751.1| protein translocase subunit yidC [Maricaulis maris MCS10] Length = 592 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 227/591 (38%), Positives = 366/591 (61%), Gaps = 20/591 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI---QTVKQPNQVDNSY--AAV 56 E N F+A+ L ++I+ +Q F + P EE E+ + Q + P+ ++ AA Sbjct: 3 EDQRNLFIALGLILVILTGYQMFVMGPAEEERRAEQAAVEASQELADPDLPASALEPAAA 62 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 DR AL + RV + PS++GS++L GA+ DD+ LR + + ++P V LL+P + Sbjct: 63 TTVDRETALGGNQRVTIDAPSVLGSLSLTGARLDDVRLRRHTETIDDDTP-VALLNPIGS 121 Query: 117 KNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + ++A + S T+ +LP +T W L SG LTP TPI L + + + + FER IS+D Sbjct: 122 DHVFYARDGWTSATSGFTDLPGGSTEWTLASGSTLTPDTPITLTYDSPSGLHFERVISVD 181 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLGDKSLVEQK 233 ++YLF + DTVTNNS ++ S G ++RH +P+ T V EG +AV+ D ++V Sbjct: 182 DNYLFTLTDTVTNNSGQEVELSRYG-LVRHEGRPEDETRNMAVFEGALAVI-DGAMVRSS 239 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH-ARYQAKFSAN 292 + +E + + + W+GI+ +YW + +P ++ F ++F+ + G ++A + Sbjct: 240 FGKLEDGNQTEESGTGGWVGITQRYWMAAAVPDQDRPFTARFRTIERGEIDAFEASYVEQ 299 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 I + G+S+ +T +FAGAKE + + ++ I RF+M I+WGW +F+ +P L++ Sbjct: 300 AIAVPAGESLASTTRIFAGAKELGVLQQVQNEVGIERFDMAINWGWLWFLTRPFVWLLTM 359 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +G FG+AI+ T+ VK++ FPLA + Y S A MK +QPK+ E++E++ + Q Q Sbjct: 360 LEGALGQFGLAILALTLMVKIVMFPLANRAYASMAKMKAVQPKMAEIKERYG-ADQQKQQ 418 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 +A+++LYKT INPLAGC PIL QIP+FFA+Y+ + ++EMRHAPF+GWI+DL+AADPTN Sbjct: 419 QALMELYKTEKINPLAGCLPILPQIPIFFALYQTLFNAIEMRHAPFFGWIRDLSAADPTN 478 Query: 473 IFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 I+ LFG++P+ + G + +G WPIIM L+M Q ++PPP D QA I ++P+V Sbjct: 479 IWNLFGLIPYDPTGIWLIGGVLGIGAWPIIMGLTMAAQQALNPPPPDPMQARIFAFLPIV 538 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 F F L+ F AGL+IYW+W+N +S++QQ +IM+ HG E +D+L + K Sbjct: 539 FTFILAPFAAGLVIYWAWNNFLSVLQQYIIMRRHGNET-QVDKLVARLLKR 588 >gi|144899247|emb|CAM76111.1| 60 kDa inner membrane insertion protein [Magnetospirillum gryphiswaldense MSR-1] Length = 575 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 226/578 (39%), Positives = 342/578 (59%), Gaps = 19/578 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPR---IEEMNNERKNIQTVKQPNQVD------- 50 M N F+AIALSV+I++ +Q +++P E T P D Sbjct: 1 MNEQRNLFLAIALSVLILFGFQ--WLFPSKTPAPESAPATTAAGTPPVPTSGDAVVPAPV 58 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + A + + R AL+ + R+ + P+L GS+++ GA+ DDL L GYH S + L Sbjct: 59 QTAAQMAVKSRTDALATAKRIRINTPTLHGSLSVTGARLDDLTLAGYHETADPTSKEIEL 118 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 LSP+ + Y AE +V ++ P +TVW++ G L+P + + L + N + + F R Sbjct: 119 LSPTGAAHPYHAEFGWVPVDAGVKTPGPDTVWSVAQGNELSPGSTVVLNWDNGDGLRFVR 178 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 T+S+DE+Y+F+I V N + P G I R + + EG + V D +L Sbjct: 179 TVSVDENYMFQIAQRVENYGTKPVTLHPFGLISRTGTPKTEGMYILHEGPLGVF-DGTLK 237 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKF 289 E KY D++K S + W+GI+DKYW + +P ++ +F + +D RYQ F Sbjct: 238 EHKYDDLKKLSTERNKTTGGWIGITDKYWLTALVPDQKEELTGRFVHQRADNADRYQVDF 297 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + + PG + TT LFAGAK + HY + + RF++ ID+GWFYF+ KP F L Sbjct: 298 TGAAKVVAPGAAAETTFHLFAGAKLVSLLDHYTEKFGVERFDLAIDFGWFYFLTKPFFYL 357 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + +GN G+AI+ TV +K + FPLA K Y S + MK +QP++ L+E+F + Sbjct: 358 LKMMNSGLGNMGLAILALTVLIKGIMFPLANKSYASMSKMKLLQPQVKALQERFGDDKVR 417 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 LQ+ M+ LYK +NP++GC PIL+QIPVFFA+YKV+ +++EMRHAPF+GWIKDL+A D Sbjct: 418 -LQQEMMALYKKEKVNPVSGCLPILIQIPVFFALYKVLFVAIEMRHAPFYGWIKDLSAQD 476 Query: 470 PTNIFTLFGILP----FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 PT I LFG++P YLP F+H+G+WP+IM +M++Q K++P P D QA ++ ++PV Sbjct: 477 PTTIMNLFGLIPWDPALYLPAFLHIGVWPLIMGATMWLQQKLNPQPLDPVQAKMMMFLPV 536 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 VF F L F AGL+IYW+WSN++SI QQ VIM+ +G + Sbjct: 537 VFTFMLGQFAAGLVIYWAWSNILSIAQQWVIMRKYGVK 574 >gi|163795447|ref|ZP_02189414.1| 60 kDa inner membrane insertion protein [alpha proteobacterium BAL199] gi|159179433|gb|EDP63964.1| 60 kDa inner membrane insertion protein [alpha proteobacterium BAL199] Length = 584 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 225/581 (38%), Positives = 342/581 (58%), Gaps = 23/581 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN------------ERKNIQTVKQ--- 45 M N +AI LSV+I+ +Q P+I++ + ++ Q Sbjct: 1 MTDQKNMILAIVLSVLILLGFQFLVERPKIDQQRQQQAQQQGQTSQADGSSVPVPGQSTA 60 Query: 46 ---PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 P +S + R AL++SPR+ + P + GSI LKGA+ DD+ L Y + + Sbjct: 61 PSAPGAARDSAGQTAGESREAALALSPRITISTPRVQGSIALKGARIDDVVLTDYRVTID 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 SP + LL P+ K+ Y+AE +V+ + +++ +P T+W S LTP P+ L + Sbjct: 121 PKSPPIHLLDPTGLKHPYYAEFGWVAASGSSVAVPTPETIWTTDS-TTLTPERPVTLSWS 179 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 N FERTI++D+ Y+F + V N S D I P G I R + + + EG + Sbjct: 180 NGQGQTFERTIAIDKDYMFTVSQRVVNKSTDAITLYPYGLISRGGTPETLDFYILHEGPL 239 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSD 280 V D +L E YSD+ + + W+GI+DKYW + +P + +++ F++ + + Sbjct: 240 GVFND-TLTEINYSDLREDGDVQRAATGGWIGITDKYWLAALVPGQGQTWNYNFRHSVRN 298 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 RYQ F +I G++ +T N LFAGAK + YE+ + F++ ID+GWFY Sbjct: 299 QSDRYQVDFLGEATSIAAGETASTENRLFAGAKLVKVLDRYEEQYGVANFDLAIDFGWFY 358 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ KP F ++++ + L+GNFG+AI+ T+ VKLLFFPLA K Y S A MK + PK+ E+R Sbjct: 359 FLTKPFFYVLTWLHALLGNFGLAILGLTICVKLLFFPLANKSYASMAKMKALTPKLQEMR 418 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK Q L M+ LYK +NP AGC PI++QIPVFFA+YK + +++EMRHAPF+G Sbjct: 419 EKHGDDR-QRLNDEMMALYKREKVNPAAGCLPIVIQIPVFFALYKTLFVNIEMRHAPFYG 477 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WIKDL+A DPT IF L G++P+ P F+ +GIWP++M ++MF+Q K++P PAD QA I Sbjct: 478 WIKDLSAPDPTTIFNLLGVIPWDPPQFLMIGIWPVLMGITMFLQQKLNPAPADPVQAKIF 537 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++P++F F L F AGL+IYW+W+N++SI QQ +IM+ G Sbjct: 538 MFLPLMFTFLLGHFAAGLVIYWTWNNLLSITQQWIIMRRMG 578 >gi|329888537|ref|ZP_08267135.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain-containing protein [Brevundimonas diminuta ATCC 11568] gi|328847093|gb|EGF96655.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain-containing protein [Brevundimonas diminuta ATCC 11568] Length = 600 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 225/537 (41%), Positives = 324/537 (60%), Gaps = 17/537 (3%) Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 V I DRAQAL RV ++ P+L GS++L+GA+ DDL L Y + NSP V L P Sbjct: 65 GVFIKDRAQALGTVARVPIQTPTLKGSLSLQGARIDDLYLTRYRETLDKNSPPVELFRPQ 124 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 ++AYFA+ + +P NTVW L G LTPTTP++L + N + + F R +S+ Sbjct: 125 GMEHAYFAQFGWSGPNVAGGVPGPNTVWRLTKGSTLTPTTPVELTWDNGSGLRFTRVVSI 184 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDK---SLV 230 D+ Y+F + DTV N I +P GR+ R P + EG I GD S Sbjct: 185 DDQYMFTVKDTVANLGTQAIAIAPYGRVERQGVPVDLGKQMILHEGAIGTFGDGGGYSTE 244 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDGHARYQAKF 289 + KY D K + WLGI+DKYW + IP+++ + +F + G ++A Sbjct: 245 QVKYKDWAKKPRIENQSTGGWLGITDKYWLAALIPTQDETIEGRFSVRDAQGMNIHEAAM 304 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 TI PG+ I T LFAGAK + YE+ L +PRF IDWG F+F+ +P+F + Sbjct: 305 LGATHTIQPGRQIEETQRLFAGAKRAEVLKAYEQSLNLPRFVYAIDWGMFWFLTRPIFTV 364 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + +FY ++GNFG+AI+ TV VKL+ FPLA K Y S + M+N+QPK++E+++K S PQ Sbjct: 365 VEFFYGVLGNFGLAILALTVVVKLILFPLANKSYESLSKMRNLQPKMEEIKKKHG-SEPQ 423 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 Q+ M+ LY+ INPLAGC P+++QIPVF+A+YKV+ +++EMRHAPF+GWI+DL+A D Sbjct: 424 KQQQEMMALYQREKINPLAGCLPMVVQIPVFYALYKVLFVTIEMRHAPFFGWIRDLSARD 483 Query: 470 PTNIFTLFGILPF----------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 P+ I+ LFG +P+ L G +H+G+ P++ +M++QM M+PP D Q I Sbjct: 484 PSTIWNLFGAIPWDPATLPILGGILNGPLHLGVLPLVYGFTMWLQMAMNPPAQDPMQRQI 543 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 MP+VF F ++ F AGL+IYW+W+NV+SI+QQ VIM AE ID + F K Sbjct: 544 FALMPIVFTFIMAPFAAGLLIYWAWNNVLSIIQQYVIMHRFKAE-NPIDAFLARFKK 599 >gi|209965568|ref|YP_002298483.1| hypothetical protein RC1_2283 [Rhodospirillum centenum SW] gi|209959034|gb|ACI99670.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 602 Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust. Identities = 233/594 (39%), Positives = 333/594 (56%), Gaps = 35/594 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPR---IEEMNNERKNIQTVKQPNQVDNSYAA-- 55 M N +AI +SV I++ + FY PR +EE ++ +Q P V A Sbjct: 1 MTDQKNLILAIVISVAILFGFNYFYERPRQQALEEYRQQQAALQAETAPAAVPGVTAPGS 60 Query: 56 ------------------------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDD 91 DR L S RV++ P L GS+NL+G + DD Sbjct: 61 TVPGPAGDIPVPAPGAPAPTDAVPAAPRDRGAVLGDSQRVQVDTPRLHGSVNLRGGRIDD 120 Query: 92 LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI--ELPNSNTVWNLISGKI 149 L L YH+ +SP V LLSP T YFAE +V TA+ LP T W +S Sbjct: 121 LTLANYHVTPDKSSPEVVLLSPVGTSQPYFAEFGWVPTADTAGQPLPGPTTDWQPVSQGP 180 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209 LTP +P+ L + N ++FER I++D Y+F + VTN S + P G + R T Sbjct: 181 LTPDSPVVLRWDNGQGLVFEREIAIDRDYMFTVTQRVTNQSGQPVTLHPYGFVQRRGTPT 240 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKE 268 + F + EG + V D +L E YSD++ S+ + + W G +DKYW +P + Sbjct: 241 TSGFFILHEGALGVF-DGTLREFDYSDLKDSTQPATQTTTGGWFGFTDKYWLVTLVPDQA 299 Query: 269 TSFHSQFKYLSDG-HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + + + G YQ F +T+ PG + +T+ LFAGAK T+ YE +L I Sbjct: 300 SPVDVRVLHQDQGGQPLYQVDFRGQGLTVAPGATAESTHRLFAGAKIVRTLDAYESELGI 359 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 RF +DWGWFYF+ KP F + +GNFGIAI++ TV ++L FFPLA KQY + A Sbjct: 360 ARFSYAVDWGWFYFLTKPFFYGLDLLGQALGNFGIAILVFTVLLRLAFFPLANKQYKAFA 419 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 MK +QPK++ELR++ Q L A ++LYK +NPL+GC PILLQIPVFFA+YKV+ Sbjct: 420 KMKLLQPKMEELRKRHGDDR-QKLSMATMELYKQEKVNPLSGCLPILLQIPVFFALYKVL 478 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 +++EMRHAPF+GWI DL+A DPT +F LFG++P+ PGF+ VG P++M +M++Q K+ Sbjct: 479 FVTIEMRHAPFYGWITDLSAPDPTTVFNLFGLIPWSPPGFLMVGALPLMMGFTMWLQQKI 538 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 SP D Q I +P +F + +++FPAGL+IYW+WSN+++I QQ IM+ G Sbjct: 539 SPANPDPIQQRIFMVLPFLFTYMMAAFPAGLVIYWTWSNLLAIAQQWYIMRRMG 592 >gi|23015970|ref|ZP_00055732.1| COG0706: Preprotein translocase subunit YidC [Magnetospirillum magnetotacticum MS-1] Length = 578 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 223/575 (38%), Positives = 340/575 (59%), Gaps = 19/575 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFY--VYPRIEEMN---------NERKNI---QTVKQP 46 M N FVAIA+SV I+ WQ F+ P +E+ + N+ T P Sbjct: 1 MNDQRNLFVAIAISVAILIGWQYFFPTAKPPVEQAAQQQAAEVKASAPANVPSPATASSP 60 Query: 47 NQVDNSYAAVLID--DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 QV + AA R +AL S R+ ++ PS+ GSI L GA+ DD+ L Y +++ Sbjct: 61 AQVPGTPAAAAQTGASRNEALGKSRRIAIQTPSMHGSIALTGARIDDITLVKYRETPAAD 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 S + L+SP+ + Y+AE +V+T N+++P +VW LT +P+ L + N Sbjct: 121 SAEIDLMSPAESPEPYWAEFGWVATDANVKVPGPESVWQAQGTGPLTQASPVVLTWDNGE 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RT ++DE+Y+F + V N P + R + + EG + V Sbjct: 181 GLRFVRTYTVDENYMFGVTQRVENYGTKAASLHPYALLARTGTPHVAGMYILHEGPLGVF 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA- 283 D +L E KY D++K + + + W GI+DKYW + +P +T +F + G+A Sbjct: 241 -DGTLKEMKYDDLKKEGSARYKTTGGWAGITDKYWLTALVPPAKTEITGRFVHQRLGNAD 299 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 RYQ + A I GK+ LF GAK+ + Y + I RF++ ID+GWFYF+ Sbjct: 300 RYQVDYLAPARVIEAGKTEEAGFHLFTGAKQVSLLDGYGEKFGIDRFDLAIDFGWFYFLT 359 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP F L+ ++ +GN G+AI+ TV +KL FPLA K YV+ MK +QPK+ EL+ ++ Sbjct: 360 KPFFYLLQMLHSALGNMGLAILALTVILKLAMFPLANKSYVAMGKMKKLQPKVQELQARY 419 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 + LQ+ M+ LYK +NP++GC PI++QIPVFFA+YKV+ +++EMRHAPF+GWI Sbjct: 420 ADDKMR-LQQEMMALYKAEKVNPVSGCLPIMVQIPVFFALYKVLFVTIEMRHAPFYGWIS 478 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+A DPTNIFTLFG++P+ P MH+G+WP+IM ++M++Q K++P P D QA ++ ++ Sbjct: 479 DLSAQDPTNIFTLFGLIPWTPPHIMHLGVWPLIMGITMYLQQKLNPQPTDPVQAKMMQFL 538 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P++F F L++F +GL+IYW+WSN +SI+QQ VIMK Sbjct: 539 PLIFTFLLANFASGLVIYWAWSNTLSILQQWVIMK 573 >gi|83859293|ref|ZP_00952814.1| putative inner membrane protein translocase component YidC [Oceanicaulis alexandrii HTCC2633] gi|83852740|gb|EAP90593.1| putative inner membrane protein translocase component YidC [Oceanicaulis alexandrii HTCC2633] Length = 672 Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust. Identities = 229/598 (38%), Positives = 360/598 (60%), Gaps = 28/598 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN-ERKNIQTVKQ------PNQVDNSY 53 M N N+ +A +++ I++ +Q F + P + E+ +T Q P D+ + Sbjct: 1 MGENRNFLLAAVIAIGILFFYQAFILDPMARDREAAEQATAETQVQETGDDAPQATDSGF 60 Query: 54 AAVLIDD---RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 AA L ++ R AL+ S R+E++ +L GS++L GA+ DDL L Y +V S P VTL Sbjct: 61 AAGLGENGMSREDALARSQRIEIRTEALSGSLSLTGARIDDLQLLRYETEVDSGVP-VTL 119 Query: 111 LSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 +SP FA ++ AN + LP +T W L+ G +LT TTP+ L A ++ F Sbjct: 120 MSPEGFDGYQFAASGWLGGANAPQGLPGLSTNWTLVEGDVLTETTPVVLEHA-AGDLTFR 178 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKS 228 RTIS+DE+YLF + DTV NN + P + +H P N F + EG + V+ D + Sbjct: 179 RTISVDENYLFTVNDTVINNGSAAVSLRPYALVRQHGVPADLQNFFVLHEGAVGVI-DGT 237 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD-GHARYQA 287 ++K+ E + + W+GI+ KYW + P + + +QF+ +S +++ Sbjct: 238 HFDRKFKKWEDEGLIERNGPGGWMGITSKYWLAAVAPEGQPNVRAQFRVVSRPDRPVFES 297 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + ++ T+ PG ++ +T+++FAGAK+ P + YE DL I R M IDWG F+F+ +P F Sbjct: 298 NYLSDAETLAPGATLESTSYVFAGAKKQPILAAYENDLGIDRLTMAIDWGMFWFLTRPFF 357 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 + +FY ++GN+G+AIM+ T+ +KL+ FPL + + S A M++ PK+ E+RE++K Sbjct: 358 AALHFFYGVLGNYGLAIMVVTLLIKLVLFPLNNRAFASMAKMRSAAPKMTEIRERYKDD- 416 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 PQ QKAM++LY+ INP+AGC P+L QIP+FFA+YK + ISL+ RHAPF+GWI+D++A Sbjct: 417 PQAQQKAMMELYRKERINPVAGCLPMLPQIPIFFALYKTVFISLDARHAPFFGWIQDMSA 476 Query: 468 ADPTNIFTLFGILPFYLPGF------MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 DPT I LFG+LP+ G + +G+WP++M ++M+ Q ++PPPADK Q I Sbjct: 477 PDPTMIGNLFGLLPYDPSGLPIVGPILAIGVWPLLMGVTMWAQQSLNPPPADKIQRQIFA 536 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRSTFS 575 +MPV+F ++ FPA LIIYWSW+N ++I QQ +IM+ G + +DR LRS + Sbjct: 537 FMPVIFTIIMAPFPAALIIYWSWNNTLTIGQQYLIMRRQGV-VTELDRNFFKLRSKLT 593 >gi|330813521|ref|YP_004357760.1| inner membrane protein translocase component YidC, long form [Candidatus Pelagibacter sp. IMCC9063] gi|327486616|gb|AEA81021.1| inner membrane protein translocase component YidC, long form [Candidatus Pelagibacter sp. IMCC9063] Length = 564 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 222/560 (39%), Positives = 339/560 (60%), Gaps = 14/560 (2%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIE-EMNNERKNIQTV------KQPNQVDNSYAAVLI 58 N AI LS II+ WQ + P I+ E K IQT P+ Sbjct: 5 NILTAIILSTIIIVGWQVLVIDPEIKKEQAKVEKTIQTKPTAGKPSAPSLNKKIQVQKKK 64 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R +AL RV+L N + GSI+L GA DD+ L+ Y + NS V +L+P Sbjct: 65 VSRQEALLTDQRVKLDNAKITGSISLVGALIDDVTLKNYQESLDENSKQVVILNPKKINK 124 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 Y+ E + S ANNI +P++N+VW L + LTP TPI+L + N N ++F + I +D+ Y Sbjct: 125 GYYLESGWAS-ANNINVPDNNSVWKLTRNRTLTPRTPIELEWDNQNGLVFTKKIEVDDQY 183 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 LF I +++ NNS + +I R + + + + EG + V+ D++L E+ Y D+ Sbjct: 184 LFSITESIKNNSKANVDLFHYSQITRKEKPQVQDFYILHEGLVGVI-DETLQEEDYDDV- 241 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 K + ++ WLGI+DKYW + +P K+ +F+++F Y + A Y N +I Sbjct: 242 KDKNQKYQGTSGWLGITDKYWLTAIVPQKKQAFNAEFIYDTAYKANY---ILTNPTSIPS 298 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 GK ++++ F GAKE TI Y + I +F++ IDWGWFYF KP+F ++ Y YN G Sbjct: 299 GKINSSSSQFFIGAKEVKTIDGYAESANINKFDLAIDWGWFYFFTKPLFFIIDYLYNFSG 358 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 NFG AI+L T +++LFFPLA + S A MK +QP+I +++ +K Q +Q M+ L Sbjct: 359 NFGWAIVLLTAGIRILFFPLANYSFASMAKMKALQPEIARMKDLYKDDK-QKIQTEMMGL 417 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y+ INP++GC P+L+QIP FFAIYK++ ++LEMRHAPF+GWI+DL+A DPT++F LFG Sbjct: 418 YRKEKINPVSGCLPMLIQIPFFFAIYKMLFVTLEMRHAPFFGWIQDLSAPDPTSLFNLFG 477 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 ++P+ P F+ +G+WPI+M +SM+IQ K++P P D QA I + P+ L+SFP+GL Sbjct: 478 LIPWDPPSFLMIGVWPILMGVSMWIQQKLNPAPTDPIQAKIFAFFPLFLTVMLASFPSGL 537 Query: 539 IIYWSWSNVISIVQQAVIMK 558 ++YW+ +NV+++ QQ VI++ Sbjct: 538 VVYWTVNNVLTMAQQYVIIR 557 >gi|254455826|ref|ZP_05069255.1| 60 kDa inner membrane protein [Candidatus Pelagibacter sp. HTCC7211] gi|207082828|gb|EDZ60254.1| 60 kDa inner membrane protein [Candidatus Pelagibacter sp. HTCC7211] Length = 558 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 223/556 (40%), Positives = 341/556 (61%), Gaps = 13/556 (2%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRI--EEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N AI+LS ++ + ++ P I E++ + K QT P+ +D + R + Sbjct: 5 NVIAAISLSAAVIILYSLYFAPPPITKEQLAEKNKTEQTTDAPS-LDQKETITEVS-REE 62 Query: 64 ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE 123 ALS S R++ +N S+IGSI+LKGA DDL + Y++ + S+ V LLSP + K+ Y E Sbjct: 63 ALSQSKRIKFENQSIIGSISLKGAAIDDLTFKEYNVALESDEK-VKLLSPRSAKDGYLIE 121 Query: 124 LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIV 183 +++T NI++PNSN+ W++ ILT +P+KL + N I FE+ ISLD+ +LF I Sbjct: 122 SGFITTDKNIDIPNSNSEWSVSGSNILTDQSPVKLTWTNDQGITFEKEISLDDKFLFTIK 181 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 V N++ + F P G+I+R + +N + + EG IA L D+ L+E+ Y DI++ S Sbjct: 182 QKVINSTNKEFDFYPYGQIIRKEIPEISNFYILHEGLIATL-DEELIEEDYDDIQEEKFS 240 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + WLGISDK+W + IP F + F Y +++A F E L G S Sbjct: 241 KTSQ-KGWLGISDKFWITSLIPPNGKEFKTTFDY----KDKFRANFVGTEPLELKGNSSI 295 Query: 304 TTNF-LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + AK I Y + L I +F++ IDWG+ YFI KP+F + YF+ L+GN+G+ Sbjct: 296 EDKLQVIVAAKRVDVIDGYAESLNIDKFDLTIDWGFLYFITKPLFYGIDYFFKLLGNYGL 355 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+ T+ ++L FFPLA + S A MK +QP++ L++ K+ + LQ+ M+ LYK Sbjct: 356 AIIAITICIRLAFFPLANFSFRSMAKMKALQPEMVRLKDLHKEDKMK-LQQEMMALYKKE 414 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP++GC PIL+QIPVFFA+YKV+ +++EMR PF+GWI+DL+ DPT++F LFG+LP+ Sbjct: 415 KVNPMSGCLPILVQIPVFFALYKVLFVTIEMRQMPFYGWIQDLSERDPTSLFNLFGLLPY 474 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 +P F+ +G WPI M +SMFIQ K++P P D QA I + P+ L+ FPAGL+IYW Sbjct: 475 DVPSFLMIGAWPIAMGVSMFIQQKLNPAPTDPMQAKIFMFFPLFLTIILAPFPAGLVIYW 534 Query: 543 SWSNVISIVQQAVIMK 558 + +N++++ QQ IMK Sbjct: 535 TVNNILTMAQQVFIMK 550 >gi|83313455|ref|YP_423719.1| putative inner membrane protein translocase component YidC [Magnetospirillum magneticum AMB-1] gi|82948296|dbj|BAE53160.1| Preprotein translocase subunit YidC [Magnetospirillum magneticum AMB-1] Length = 579 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 223/580 (38%), Positives = 332/580 (57%), Gaps = 28/580 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPR---------------------IEEMNNERKN 39 M N FVAIA+SV I+ WQ F+ + Sbjct: 1 MNDQRNLFVAIAISVAILIGWQYFFPTAKPPVEQAAQQQSAEQKASAPATAPTPATASSP 60 Query: 40 IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 Q P AA D AL S R+ ++ PS+ GSI L GA+ DD+ L Y Sbjct: 61 AQVPGSPAAAAAQPAATRAD----ALGKSRRIAIQTPSMHGSIALTGARIDDITLVKYRE 116 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 +++S + L+SP+ + Y+AE +V+T N+++P ++VW LTP +P+ L Sbjct: 117 TPAADSREIDLMSPAESPEPYWAEFGWVATEANVKVPGPDSVWQAQGSGPLTPASPLVLT 176 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N + F RT ++DE+Y+F + V N P + R + + EG Sbjct: 177 WDNGEGLRFVRTYTVDENYMFGVAQRVENYGTKPASLHPYALLARTGTPHVAGMYILHEG 236 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + V D +L E KY D++K S + W GI+DKYW + +P +T +F + Sbjct: 237 PLGVF-DGTLKEMKYDDLKKEGSSRHKTTGGWAGITDKYWLTALVPPAKTEITGRFVHQR 295 Query: 280 DGHA-RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 G+A RYQ + A I PGKS LF GAK+ + Y + I RF++ ID+GW Sbjct: 296 LGNADRYQVDYLAPARMIEPGKSEEAGFHLFTGAKQVSLLDGYAEKFGIDRFDLAIDFGW 355 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FYF+ KP F L+ ++ +GN G+AI+ TV +KL FPLA K YV+ MK +QPK+ E Sbjct: 356 FYFLTKPFFYLLQMLHSALGNMGLAILALTVILKLAMFPLANKSYVAMGKMKKLQPKVQE 415 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+ ++ + LQ+ M+ LYKT +NP++GC PI++QIPVFFA+YKV+ +++EMRHAPF Sbjct: 416 LQARYADDKMR-LQQEMMALYKTEKVNPVSGCLPIMVQIPVFFALYKVLFVTIEMRHAPF 474 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI DL+A DPTNIFTLFG++P+ P H+G+WP+IM ++MF+Q K++P P D QA Sbjct: 475 YGWISDLSAQDPTNIFTLFGMIPWTPPSMFHLGVWPLIMGVTMFLQQKLNPQPTDPVQAK 534 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ ++P++F F L++F +GL+IYW+WSN +SI+QQ VIMK Sbjct: 535 MMQFLPIIFTFLLANFASGLVIYWAWSNTLSILQQWVIMK 574 >gi|146278901|ref|YP_001169060.1| putative inner membrane protein translocase component YidC [Rhodobacter sphaeroides ATCC 17025] gi|145557142|gb|ABP71755.1| protein translocase subunit yidC [Rhodobacter sphaeroides ATCC 17025] Length = 628 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 227/611 (37%), Positives = 351/611 (57%), Gaps = 38/611 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI----QTVKQPNQVDNSYAAVL 57 ++N N +A LS +++ W F+++P E + + +T P+ ++ + Sbjct: 6 DQNKNLILATGLSFLVIMVW--FFLFPPPEAVTQDEPATVATQETALAPSATPDAPMTAV 63 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 D L +PRV + P L GSI++ G + DDL+L+ YH + S IV LLSP Sbjct: 64 PPD--AELPETPRVAIDTPRLQGSISMLGGRIDDLSLKSYHETLDPGSQIVRLLSPVGEP 121 Query: 118 NAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 NAY+A + + ++P +NT W + G L P+ L + N ++F RTIS+D Sbjct: 122 NAYYALYGWTPAGALDYEDVPGANTTWTQVGGATLGVDQPVTLEWDNGQGLVFTRTISVD 181 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 +HY+F I TV N + + +R +P G + RH KP N F + EG + D L E Y Sbjct: 182 DHYMFTISQTVENRTGEAVRLAPYGIVARHGKPLNLQNFFVLHEGAVG-RADGELTETNY 240 Query: 235 SDI-------EKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 DI + +++ E+ + W+G +DKYW + IP + F S KY+ G Y Sbjct: 241 DDIAELPQVAREGALAEVVEAQQDGWIGFTDKYWMTTLIPQQGQPFSSVTKYVP-GADIY 299 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI---------PRFEMLIDW 336 QA+ +T+ PG + ++ LFAGAKE+ I Y+ + AI P F IDW Sbjct: 300 QAETREQLVTVAPGGTAEVSSRLFAGAKEWEAIRAYQNEGAIEPTEGAEPIPGFIDSIDW 359 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GWF+F+ KP+F ++ + ++GN G+AI+ T +K L PLA K YVS A MK +QP++ Sbjct: 360 GWFFFLTKPIFAVLHWLNQMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPEL 419 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 + LRE+ + ++Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+RHA Sbjct: 420 EALRERAGEDK-MLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHA 478 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPP 510 PF+GW+ DL+A DP++IF FG+ P+ P + +GI PI++ +SM++Q K++P Sbjct: 479 PFFGWLTDLSAPDPSSIFNFFGLAPWAAPTPGSTMALIFIGILPILLGISMWLQQKLNPA 538 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P DK QAMI WMP VF+F L F +GL++YW +NVI+ QQ VIM+ HG L + Sbjct: 539 PTDKAQAMIFAWMPWVFMFMLGHFASGLVLYWIVNNVITFSQQYVIMRSHGHHPDLFGNI 598 Query: 571 RSTFSKNYNSQ 581 ++ FS+ +Q Sbjct: 599 KAGFSRKSAAQ 609 >gi|288957364|ref|YP_003447705.1| preprotein translocase YidC subunit [Azospirillum sp. B510] gi|288909672|dbj|BAI71161.1| preprotein translocase YidC subunit [Azospirillum sp. B510] Length = 577 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 204/503 (40%), Positives = 306/503 (60%), Gaps = 4/503 (0%) Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A+ ++ RV++ P+L GS+NL G + DDL L YH SP + LL+P+ T AY+ Sbjct: 77 AEQMAAGTRVKIDTPALHGSVNLVGGRIDDLTLAQYHETPDPKSPEIVLLAPAGTPAAYY 136 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 AE +V + P + T W G LTP P+ L + N ++FER I++D ++F Sbjct: 137 AEFGWVPQGAGVATPTATTRWT-ADGAALTPEKPLTLSWDNGQGLVFERKIAVDPDFMFT 195 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 + TV N + P + R + + + EG + V + SL E+KY D+ K+ Sbjct: 196 VTQTVRNTGAAPVTLLPYSLVSRSGTPHTSGYYILHEGPLGVF-NGSLTEEKYDDVRKAG 254 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA-RYQAKFSANEITILPGK 300 + W+GI+DKYW +P ++F Y +A RYQ +T+ PG Sbjct: 255 SIAKDTTGGWIGITDKYWLVSLVPDPSEKVTARFLYNQVANADRYQTDTMGAPVTVAPGA 314 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 S T LFAGAK+ + Y + L I F++ ID+GWFYF+ KP F + + ++GNF Sbjct: 315 SAENTGRLFAGAKQVKLLDGYSEKLNIKNFDLAIDFGWFYFLTKPFFYALDFLGRIIGNF 374 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 GIAI++ TV VK +FFPLA K Y + + MK +QPK+ ELREKF ++ Q+ M LYK Sbjct: 375 GIAILVLTVCVKAVFFPLANKSYQAMSKMKALQPKMQELREKFSDDQARMNQELM-ALYK 433 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 ++P++GC PI++QIPVFF++YKV+ +++EMRHAPF+GWI DL++ DPT IF LFG++ Sbjct: 434 REKVSPVSGCLPIVIQIPVFFSLYKVLFVTIEMRHAPFFGWIHDLSSPDPTTIFNLFGLI 493 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 P+ P +H+G+WP+IM ++M+ Q KM+P P D QA + ++P+VF F L+ FPAGL+I Sbjct: 494 PWDPPAMLHLGLWPLIMGVTMWFQQKMNPAPPDPVQAKVFQFLPIVFTFMLAGFPAGLVI 553 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW+W+N +S++QQ IMK G + Sbjct: 554 YWAWNNTLSVLQQWTIMKRMGVK 576 >gi|83594668|ref|YP_428420.1| putative inner membrane protein translocase component YidC [Rhodospirillum rubrum ATCC 11170] gi|83577582|gb|ABC24133.1| protein translocase subunit yidC [Rhodospirillum rubrum ATCC 11170] Length = 595 Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust. Identities = 209/511 (40%), Positives = 314/511 (61%), Gaps = 4/511 (0%) Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 AA L + A A +SPR+ + L GSI L+GA+ DDL+L Y V SP ++LLSP Sbjct: 87 AASLSREEALAADISPRIGIDTARLHGSIRLRGARIDDLSLVDYRETVDPQSPEISLLSP 146 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y+AE +V+ +++P+++T+W G L P+ L + N + F R I+ Sbjct: 147 PGAPLPYYAEFGWVAGTPGVKVPDADTLWQADRGA-LGVDAPVTLTWDNGEGLRFIRKIA 205 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 +D ++F I V N + P G + R N + + EG + V D +L E K Sbjct: 206 IDHDFMFSITQAVENTGAGAVTLFPYGLVSRINTPALLNYYILHEGPLGVF-DGTLKEVK 264 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDGHARYQAKFSAN 292 YS ++ + W+GI+DKYW + + + +F Y DG YQA F Sbjct: 265 YSALKDDGEVKHTSTGGWMGITDKYWLTALVTDQSMPVTGRFLYQPRDGRDGYQADFLGA 324 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 T+ PG I T+N LF+GAKE + Y +L I F++ ID+GWFYF+ KP F+ + + Sbjct: 325 AFTVEPGGRIETSNHLFSGAKEVKLLDRYTDELGIKNFDLAIDFGWFYFMTKPFFLSIQF 384 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + ++GN G+AI+ TV +KL+FFPLA K Y S + MK +QP++ +L+E+FK + L Sbjct: 385 LHGILGNMGLAILAFTVVLKLVFFPLANKSYRSMSKMKLLQPELKKLQERFKDDRAR-LN 443 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+ LYK +NPL+GC PI++QIPVFFA+YKV+ +S+EMRH PF+GWI+DLAA DPT Sbjct: 444 QEMMSLYKKEQVNPLSGCLPIVIQIPVFFALYKVLFVSIEMRHEPFYGWIRDLAAPDPTT 503 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 +F LFG++P+ P + +G WP+IM ++M++Q K++P PAD QA I+ ++P++F F L+ Sbjct: 504 VFNLFGLIPWDPPNMLMLGAWPLIMGVTMWMQQKLNPTPADPTQAKIMMFLPIMFTFMLA 563 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F AGL+IYW+W+N++SI QQ VIMK GA+ Sbjct: 564 HFAAGLVIYWTWNNLLSITQQWVIMKRMGAK 594 >gi|197103856|ref|YP_002129233.1| preprotein translocase subunit [Phenylobacterium zucineum HLK1] gi|254773009|sp|B4RDV5|OXAA_PHEZH RecName: Full=Inner membrane protein oxaA gi|196477276|gb|ACG76804.1| preprotein translocase subunit [Phenylobacterium zucineum HLK1] Length = 598 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 207/511 (40%), Positives = 310/511 (60%), Gaps = 16/511 (3%) Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 R A++ +PRV++ P L GS++L+GA+ DDL L + V +SP V LL P + + Sbjct: 68 RQAAVAATPRVKIDTPMLTGSLSLRGARIDDLYLDRFRQTVEKDSPPVELLRPEGAQYPW 127 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 FAE+ +V AN LP+S VW L G L P P+ L + N + F R I +D+ YLF Sbjct: 128 FAEVGWVG-ANVPGLPDSGAVWTLAQGSTLAPGQPVVLTYANGQGLTFTRRIEVDDRYLF 186 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 I DTV N + + +P G + R P V EG I L D L + KY K Sbjct: 187 TITDTVANTTGQPVTIAPYGTVQRQGVPADLGKNQIVHEGAIGWL-DGKLRQVKYGKWRK 245 Query: 240 SSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDGHARYQAKFSANEITIL 297 ++ + WLGI+DKYW + IP ++ + QF+ + G A F +TI Sbjct: 246 EGGGPAYNSTGGWLGITDKYWLAALIPGQQEAVTGQFRRTQAPGVDVLDANFVGAPVTIP 305 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G+ ++ T FAGAK+ P + YE+ L + F+ +DWG F+F+ +P+F + + + + Sbjct: 306 AGRQVSETTRFFAGAKQVPILRDYEQSLGVAHFDNAVDWGNFWFLTRPIFQFLEFIHRYI 365 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G FG+AI+ TV V+L+FFPLA KQY S MK +QP+++ELR+K+K P + Q+ ++ Sbjct: 366 GTFGLAILALTVVVRLIFFPLANKQYESITKMKKVQPQMEELRKKYKDDPAK-QQQELLA 424 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LY+ +NPLAGC P+LLQIPVF+A+YKV+++++EMRHAPF GWI+DL+A DPT I+ LF Sbjct: 425 LYQREKVNPLAGCLPLLLQIPVFYALYKVLTVTIEMRHAPFMGWIQDLSARDPTTIWNLF 484 Query: 478 GILPF----------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 G++P+ +L G +H+G+ PI+ +M++ M MSPP D Q I MP++F Sbjct: 485 GLIPWDPASAPLIGAFLNGPLHLGVLPILYGFTMWLTMAMSPPAGDPIQQKIFQLMPIIF 544 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F ++ F GL+IYW+WSNV++++QQ VIM+ Sbjct: 545 TFIMAPFAVGLLIYWTWSNVLTLLQQYVIMR 575 >gi|126463485|ref|YP_001044599.1| putative inner membrane protein translocase component YidC [Rhodobacter sphaeroides ATCC 17029] gi|166977405|sp|A3PNB1|OXAA_RHOS1 RecName: Full=Inner membrane protein oxaA gi|126105149|gb|ABN77827.1| protein translocase subunit yidC [Rhodobacter sphaeroides ATCC 17029] Length = 623 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 224/610 (36%), Positives = 348/610 (57%), Gaps = 37/610 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI---QTVKQPNQVDNSYAAVLI 58 ++N N +A LS +++ W F+++P E + + QT P+ ++ + Sbjct: 3 DQNKNLILATGLSFLVIMVW--FFLFPPPEAVTEGETTVATQQTAVAPSATPDAPTTAVP 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D L + RV + P L GSI++ G + DDL+L+ YH + S IV LLSP N Sbjct: 61 PD--AELPETQRVVIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPN 118 Query: 119 AYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 AY+A + ++P +NT W + L P+ L + N ++F RTIS+D+ Sbjct: 119 AYYALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDD 178 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 HY+F + TV NNS ++ +P G + RH KP N F + EG + D L E KY Sbjct: 179 HYMFSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVG-RADGKLTETKYD 237 Query: 236 DI-EKSSISNFH--------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + E ++ + + W+G +DKYW + IP + F S KY+ G YQ Sbjct: 238 KVAELPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYVP-GADIYQ 296 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWG 337 A+ +T+ PG + ++ LFAGAKE+ TI Y+ + A IP F IDWG Sbjct: 297 AETREQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWG 356 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WF+F+ KP+F ++ + +++GN G+AI+ T +K L PLA K YVS A MK +QP+++ Sbjct: 357 WFFFLTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELE 416 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 LRE+ ++Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+RHAP Sbjct: 417 ALRERAGDDK-MLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAP 475 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPP 511 F+GW+KDL+A DP++IF FG+ P+ P + +G PI++ +SM++Q K++P P Sbjct: 476 FFGWLKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAP 535 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 DK QAMI WMP VF+F L F +GL++YW +N+I+ QQ VIM+ HG + ++ Sbjct: 536 GDKAQAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIK 595 Query: 572 STFSKNYNSQ 581 ++FS+ +Q Sbjct: 596 ASFSRKPAAQ 605 >gi|332559538|ref|ZP_08413860.1| membrane protein insertase [Rhodobacter sphaeroides WS8N] gi|332277250|gb|EGJ22565.1| membrane protein insertase [Rhodobacter sphaeroides WS8N] Length = 623 Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust. Identities = 224/610 (36%), Positives = 348/610 (57%), Gaps = 37/610 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI---QTVKQPNQVDNSYAAVLI 58 ++N N +A LS +++ W F+++P E + + QT P+ ++ + Sbjct: 3 DQNKNLILATGLSFLVIMVW--FFLFPPPEAVTEGEPTVATQQTAVAPSATPDAPTTAVP 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D L + RV + P L GSI++ G + DDL+L+ YH + S IV LLSP N Sbjct: 61 PD--AELPETQRVVIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPN 118 Query: 119 AYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 AY+A + ++P +NT W + L P+ L + N ++F RTIS+D+ Sbjct: 119 AYYALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDD 178 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 HY+F + TV NNS ++ +P G + RH KP N F + EG + D L E KY Sbjct: 179 HYMFSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVG-RADGKLTETKYD 237 Query: 236 DI-EKSSISNFH--------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + E ++ + + W+G +DKYW + IP + F S KY+ G YQ Sbjct: 238 KVAELPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYVP-GADIYQ 296 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWG 337 A+ +T+ PG + ++ LFAGAKE+ TI Y+ + A IP F IDWG Sbjct: 297 AETREQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWG 356 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WF+F+ KP+F ++ + +++GN G+AI+ T +K L PLA K YVS A MK +QP+++ Sbjct: 357 WFFFLTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELE 416 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 LRE+ ++Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+RHAP Sbjct: 417 ALRERAGDDK-MLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAP 475 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPP 511 F+GW+KDL+A DP++IF FG+ P+ P + +G PI++ +SM++Q K++P P Sbjct: 476 FFGWLKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAP 535 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 DK QAMI WMP VF+F L F +GL++YW +N+I+ QQ VIM+ HG + ++ Sbjct: 536 GDKAQAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIK 595 Query: 572 STFSKNYNSQ 581 ++FS+ +Q Sbjct: 596 ASFSRKPAAQ 605 >gi|221640557|ref|YP_002526819.1| putative inner membrane protein translocase component YidC [Rhodobacter sphaeroides KD131] gi|254773018|sp|B9KNZ6|OXAA_RHOSK RecName: Full=Inner membrane protein oxaA gi|221161338|gb|ACM02318.1| Inner membrane protein oxaA [Rhodobacter sphaeroides KD131] Length = 623 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 224/610 (36%), Positives = 348/610 (57%), Gaps = 37/610 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI---QTVKQPNQVDNSYAAVLI 58 ++N N +A LS +++ W F+++P E + + QT P+ ++ + Sbjct: 3 DQNKNLILATGLSFLVIMVW--FFLFPPPEAVTEGEPTVATQQTAVAPSATPDAPTTAVP 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D L + RV + P L GSI++ G + DDL+L+ YH + S IV LLSP N Sbjct: 61 PD--ADLPETRRVAIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPN 118 Query: 119 AYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 AY+A + ++P +NT W + L P+ L + N ++F RTIS+D+ Sbjct: 119 AYYALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDD 178 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 HY+F + TV NNS ++ +P G + RH KP N F + EG + D L E KY Sbjct: 179 HYMFSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVG-RADGKLTETKYD 237 Query: 236 DI-EKSSISNFH--------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + E ++ + + W+G +DKYW + IP + F S KY+ G YQ Sbjct: 238 KVAELPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYVP-GADIYQ 296 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWG 337 A+ +T+ PG + ++ LFAGAKE+ TI Y+ + A IP F IDWG Sbjct: 297 AETREQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWG 356 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WF+F+ KP+F ++ + +++GN G+AI+ T +K L PLA K YVS A MK +QP+++ Sbjct: 357 WFFFLTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELE 416 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 LRE+ ++Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+RHAP Sbjct: 417 ALRERAGDDK-MLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAP 475 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPP 511 F+GW+KDL+A DP++IF FG+ P+ P + +G PI++ +SM++Q K++P P Sbjct: 476 FFGWLKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAP 535 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 DK QAMI WMP VF+F L F +GL++YW +N+I+ QQ VIM+ HG + ++ Sbjct: 536 GDKAQAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIK 595 Query: 572 STFSKNYNSQ 581 ++FS+ +Q Sbjct: 596 ASFSRKPAAQ 605 >gi|77464645|ref|YP_354149.1| putative inner membrane protein translocase component YidC [Rhodobacter sphaeroides 2.4.1] gi|123590899|sp|Q3IYY6|OXAA_RHOS4 RecName: Full=Inner membrane protein oxaA gi|77389063|gb|ABA80248.1| protein translocase subunit yidC [Rhodobacter sphaeroides 2.4.1] Length = 623 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 224/610 (36%), Positives = 348/610 (57%), Gaps = 37/610 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI---QTVKQPNQVDNSYAAVLI 58 ++N N +A LS +++ W F+++P E + + QT P+ ++ + Sbjct: 3 DQNKNLILATGLSFLVIMVW--FFLFPPPEAVTEGEPTVATQQTAVAPSATPDAPTTAVP 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D L + RV + P L GSI++ G + DDL+L+ YH + S IV LLSP N Sbjct: 61 PD--ADLPETQRVVIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPN 118 Query: 119 AYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 AY+A + ++P +NT W + L P+ L + N ++F RTIS+D+ Sbjct: 119 AYYALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDD 178 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 HY+F + TV NNS ++ +P G + RH KP N F + EG + D L E KY Sbjct: 179 HYMFSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVG-RADGKLTETKYD 237 Query: 236 DI-EKSSISNFH--------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + E ++ + + W+G +DKYW + IP + F S KY+ G YQ Sbjct: 238 KVAELPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYVP-GADIYQ 296 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWG 337 A+ +T+ PG + ++ LFAGAKE+ TI Y+ + A IP F IDWG Sbjct: 297 AETREQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWG 356 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WF+F+ KP+F ++ + +++GN G+AI+ T +K L PLA K YVS A MK +QP+++ Sbjct: 357 WFFFLTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELE 416 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 LRE+ ++Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+RHAP Sbjct: 417 ALRERAGDDK-MLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAP 475 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPP 511 F+GW+KDL+A DP++IF FG+ P+ P + +G PI++ +SM++Q K++P P Sbjct: 476 FFGWLKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAP 535 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 DK QAMI WMP VF+F L F +GL++YW +N+I+ QQ VIM+ HG + ++ Sbjct: 536 GDKAQAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIK 595 Query: 572 STFSKNYNSQ 581 ++FS+ +Q Sbjct: 596 ASFSRKPAAQ 605 >gi|148556519|ref|YP_001264101.1| putative inner membrane protein translocase component YidC [Sphingomonas wittichii RW1] gi|148501709|gb|ABQ69963.1| protein translocase subunit yidC [Sphingomonas wittichii RW1] Length = 577 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 211/569 (37%), Positives = 322/569 (56%), Gaps = 12/569 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----NFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 ME N +AI LS ++++ WQ F+ + E + + QP + Sbjct: 1 MENQRNMILAIVLSALVLFGWQFLGDRFFPPAKPPVTKIEGGQEKVLPQPGADPAAAGPK 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 I RA L +PRV + P L GSINLKGA+ DDL L+ Y V+ N+P + LLSP + Sbjct: 61 AIRARAAVLRETPRVAIDTPKLAGSINLKGARIDDLVLKAYRETVAKNAPPIRLLSPLGS 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 AY+A + T + ++ P NTVW SG LTP TP+ L + N FE I++D Sbjct: 121 PAAYYAGFGW--TGDGVDAPGPNTVWT-ASGTALTPETPVTLSWTNTRGQRFETVIAVDR 177 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y+F I + N + P G I + +++ + G I V D + + + Sbjct: 178 DYMFTITQKLVNGGAGAVAARPYGLISKDGVSKDPSSWTLHTGPIGVFNDAANYDLSFKK 237 Query: 237 IEKSSISN--FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 ++++ F + WLG DKYW + +P + S + F LS YQA S + Sbjct: 238 LDEAGQPGIRFASTGGWLGFGDKYWLTALVPDSKASVDAGF--LSTAPQVYQAVESGRAL 295 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I PG++ + + FAGAKE + YE D +P F IDWGWF + KP+F ++ + Sbjct: 296 VIAPGQAGSVSQRFFAGAKEVALLDRYENDQGVPLFSRAIDWGWFRVLEKPIFWVLDQVF 355 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 LVGNFG+AI++ T V+ L FP+A+KQ+ S A M+ +QPK+ EL+E+ K P+ LQ+ Sbjct: 356 KLVGNFGVAIIILTFLVRGLMFPIAQKQFRSMAGMRRVQPKMKELQERLKDDKPR-LQQE 414 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +++LY+ +NPLAGC PIL+QIPVF+A+YKV+ +++EMRH PF WI+DL+A DP ++ Sbjct: 415 LLKLYQEEKVNPLAGCLPILVQIPVFYALYKVLMVTIEMRHQPFVLWIRDLSAPDPLHVL 474 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 LFG+L F P F+ +G+ +++ +SM++Q K++P P D Q + MP + +F ++ F Sbjct: 475 NLFGLLDFTPPAFLGIGVLALLLGVSMWLQFKLNPQPMDDAQKQVFALMPWIMMFIMAPF 534 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 AGL+IYW SN ++I QQA + + H E Sbjct: 535 AAGLLIYWVTSNFLTIAQQAWLYRQHPVE 563 >gi|159042884|ref|YP_001531678.1| putative inner membrane protein translocase component YidC [Dinoroseobacter shibae DFL 12] gi|189036349|sp|A8LMA0|OXAA_DINSH RecName: Full=Inner membrane protein oxaA gi|157910644|gb|ABV92077.1| preprotein translocase subunit [Dinoroseobacter shibae DFL 12] Length = 606 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 231/608 (37%), Positives = 352/608 (57%), Gaps = 34/608 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ----------PNQVDN 51 ++N N +A ALS +++ W F ++P E + + Q + P V Sbjct: 3 DQNKNLILATALSFLVILVW--FLLFPPEEPVTDPNAPTQITQSGETADVALTPPAAVTE 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + A +PRV++ P+L GSI+L G + DDL+LR Y+ + +SPIV LL Sbjct: 61 AAPGAAPQTAATPTENAPRVQIDTPALEGSISLLGGRIDDLSLRNYNETLEPDSPIVRLL 120 Query: 112 SPSNTKNAYFAELDYV--STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 SP + AY+A + T + ++P +NT+W + SG LT TP+ L ++N N ++F Sbjct: 121 SPVDAPGAYYALYGWAPAGTLSFDDVPGANTLWTVESGDTLTVDTPVVLRWENGNGLIFR 180 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 RT+++D+ ++F + +V N + R P G I RH N F + EG +A + D SL Sbjct: 181 RTLAVDDDFMFTVTQSVENTTETDKRMQPYGIIARHGEPDTINFFVLHEGVVA-MADGSL 239 Query: 230 VEQKYSDI----------EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 +E Y D+ ++ + E N W+G +DK W + IP+ F S KY+ Sbjct: 240 IESDYDDMLDYDFVEREGARAEVEQI-EQNGWIGFTDKNWMTTLIPTPGQPFTSVAKYVG 298 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 + YQ + T+ G+++T LFAGAKE+ I YE++L I F IDWGWF Sbjct: 299 NADI-YQTETRLPTQTVPGGQTVTVETRLFAGAKEWEAIRGYERELGIEGFIDSIDWGWF 357 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YF+ KP+F ++ L+GN G+AI++ T+ +K L PLA K YVS A MK +QP++++L Sbjct: 358 YFLTKPIFFVLHELNLLIGNMGVAIIVLTLLIKALLLPLAWKSYVSMARMKELQPEMEKL 417 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +EK Q LQ AM++LYK +NP AGC PILLQIP+FF++YKVI +++E+RHAPF+ Sbjct: 418 KEKAGDD-RQKLQVAMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPFF 476 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 G +DL+A DPT+I LFG+LPF P + +GI P+++ +SM++Q K++P P D Sbjct: 477 GPFQDLSAPDPTSIMNLFGLLPFASPEPGSILALIFIGILPLLLGISMWLQQKLNPAPTD 536 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 QAMI W+P VF+F L +F +GLI+YW +NVI+ QQ IM+ HG + L + ++ Sbjct: 537 PTQAMIFAWLPWVFMFMLGTFASGLIVYWIANNVITFAQQYFIMRRHGYKPDLFGNIVAS 596 Query: 574 FSKNYNSQ 581 F K S+ Sbjct: 597 FKKKKPSE 604 >gi|84685375|ref|ZP_01013273.1| putative inner membrane protein translocase component YidC [Maritimibacter alkaliphilus HTCC2654] gi|84666532|gb|EAQ13004.1| putative inner membrane protein translocase component YidC [Rhodobacterales bacterium HTCC2654] Length = 613 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 225/613 (36%), Positives = 344/613 (56%), Gaps = 47/613 (7%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD------NSYAAV 56 +N N +A LS +++ AW ++P E + + + P D N+ Sbjct: 4 QNRNLLIATVLSFVVITAW--MLLFPPAEPEAVQPEEVAETLAPGATDGAATPPNAAEQT 61 Query: 57 LIDDRAQA----------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 D +A L SPR+ ++ P L GSI+L G + DDL+L Y + + S Sbjct: 62 GTDAAPEATPDTTTTAQTLENSPRIPVETPKLSGSISLIGGRIDDLHLSDYRVSLDKGSD 121 Query: 107 IVTLLSPSNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 VTLL PS + AY+ + N N ++P + T W L G LTP TPI L + N Sbjct: 122 TVTLLRPSGSDEAYYTLYGWAPGGNLGNADVPGAMTQWELEEGDTLTPETPITLAWTNDA 181 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAV 223 ++F RTIS+DE YLF + +V N S R +P G I RH +P F + EG I Sbjct: 182 GMIFRRTISVDEDYLFTVRQSVENGSDIAQRLAPYGLIARHGEPSNLKGFFILHEGVIRQ 241 Query: 224 LGDKSLVEQKYSDI-------------EKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 D L E Y D E ++I+ N W+G +D YW ++ +P Sbjct: 242 -DDTELSEIDYKDARELDRDPREGAPAEATAITE----NGWVGFTDHYWETILVPESGQP 296 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + + KY+ +G YQ + I + PG + + LFAGAKE+ TI Y+ D I RF Sbjct: 297 YTAVVKYV-EGADIYQTEVRLPTIEVAPGATAEVSTRLFAGAKEWDTIRDYQNDEGIYRF 355 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 IDWG F+F+ KP+F ++ + ++ +GN G +I+ T +K++ FPLA + YVS A MK Sbjct: 356 LDSIDWGMFFFLTKPIFAVLHWLHSFIGNMGWSIIALTFVIKMVLFPLAYRSYVSMAKMK 415 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QP++++LRE+ + +Q+ M++LYK + +NP +GC PILLQIP++F++YKVI ++ Sbjct: 416 ELQPEMEKLREQAGDDRMK-MQQGMMELYKKNKVNPASGCLPILLQIPIWFSLYKVIFVT 474 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQ 504 LE+RH P++GWI+DL+A DP++I LFG+LP P F +G+ PI++ +SM++Q Sbjct: 475 LELRHEPWFGWIRDLSAPDPSSILNLFGLLPNAAPDPTSWFYFFSLGVLPILLGISMWLQ 534 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 K++P PAD QA I+NWMP VF+F L F +GL+IYW +N ++ +QQ IM+ HGA+ Sbjct: 535 QKLNPAPADATQATIMNWMPWVFMFMLGRFASGLVIYWIANNTLTFIQQYTIMRSHGAKP 594 Query: 565 GLIDRLRSTFSKN 577 + ++S+F K Sbjct: 595 DIFGNIKSSFKKK 607 >gi|302381828|ref|YP_003817651.1| membrane protein insertase, YidC/Oxa1 family [Brevundimonas subvibrioides ATCC 15264] gi|302192456|gb|ADL00028.1| membrane protein insertase, YidC/Oxa1 family [Brevundimonas subvibrioides ATCC 15264] Length = 614 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 213/539 (39%), Positives = 319/539 (59%), Gaps = 22/539 (4%) Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 P + + DR +AL R+ + P+L GS++L+G + DDL L+ Y + S Sbjct: 62 PASTGATGPVTFVTDRTKALGNVARIPVSTPTLQGSMSLQGGRIDDLFLKNYRQTIDPTS 121 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 P L P ++AYFA+ + +P +NTVW L +G LTP TP+ L + N Sbjct: 122 PYEELFRPQGMEHAYFAQFGWTGPNVPGGVPGANTVWRLTAGSTLTPATPVTLTWDNGQG 181 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVL 224 + F R +S+D+ Y+F + DTV N I +P GR+ R P T + EG I Sbjct: 182 LRFTRVLSVDDRYMFTVTDTVANLGTAPITIAPYGRVERQGVPPALGKTQILHEGGIGTF 241 Query: 225 --GDKSLVEQ-KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 GD + Q KY D K + WLGI+DKYW + IP ++ + ++F+ Sbjct: 242 SKGDGYVTSQLKYGDWAKKPRQEHESTGGWLGITDKYWMAALIPPQDEAIQAEFRVTDAA 301 Query: 282 -HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 + ++A+ TI PG+ +T LFAGAK + YEK +PRF IDWG+ + Sbjct: 302 TYDIHEARMLGAARTIQPGRQVTEVQHLFAGAKRNEILADYEKQFDLPRFIYAIDWGFLF 361 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ +P+F+L+ +FY LVGNFG+AI+L T+ +KL+ FPLA K Y S + M+ +QP +++++ Sbjct: 362 FLTRPIFLLVEFFYGLVGNFGVAILLLTLTIKLIMFPLANKSYESLSKMRKLQPLMEKIK 421 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ K PQ QKA ++LY+ INPLAGC PIL+QIPVF+A+YKV+ +++EMRHAPF+G Sbjct: 422 EQNKDD-PQAQQKATMELYQKEKINPLAGCLPILVQIPVFYALYKVLYVTIEMRHAPFFG 480 Query: 461 WIKDLAAADPTNIFTLFGILPF------YLPGFM--HVG--------IWPIIMSLSMFIQ 504 WI+DL+A DPTNI+TLFG++P+ + G + H G + I+ +M++Q Sbjct: 481 WIRDLSAPDPTNIWTLFGLIPWDPSSAPLIGGLIGVHTGGGFTLALSVLAILYGFTMWLQ 540 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M+PP D Q I +MP++F F ++SFPAGL++YW+W+N++SI QQ IM GAE Sbjct: 541 QAMNPPAPDPVQRQIFAFMPIIFTFIMASFPAGLLVYWAWNNILSIAQQYFIMHRFGAE 599 >gi|259415716|ref|ZP_05739636.1| inner membrane protein OxaA [Silicibacter sp. TrichCH4B] gi|259347155|gb|EEW58932.1| inner membrane protein OxaA [Silicibacter sp. TrichCH4B] Length = 611 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 228/610 (37%), Positives = 342/610 (56%), Gaps = 36/610 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA------ 55 ++N N +A ALS +++ W F+ P E + +T P AA Sbjct: 3 DQNKNLLLATALSFLVILGWY-FFFPPPEEAPQPAAQVTETTATPGDTSGPAAAPSAGEA 61 Query: 56 -----VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 A +PR+ + P + GSI+LKG + DDL L+ Y + +SPIVTL Sbjct: 62 TAEADAAATAEVDAAEDAPRLAINTPRVEGSISLKGGRIDDLRLKDYRETLDDDSPIVTL 121 Query: 111 LSPSNTKNAYFAELDYV-STANNIE-LPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 LSP+ NAY+A + T IE +P +NT W G LTP T + L + N + F Sbjct: 122 LSPAGQANAYYALYGWAPGTGLGIEDVPTANTRWQAADGATLTPETSVTLTWDNGKGLTF 181 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDK 227 R I++DE Y+F I +VTN S + + +P G + RH P N F + EG + + D Sbjct: 182 SREIAIDEDYMFSITQSVTNTSGESVALAPYGTLARHGLPANLENFFVLHEGVVG-MADG 240 Query: 228 SLVEQKYSDI----------EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 L E Y D+ +S I++ E N W+G + YW S IP+ +F S KY Sbjct: 241 ELAEIDYDDMTDFDPDPRDGSRSQITSVTE-NGWIGFTGHYWMSTLIPAPGDAFRSIVKY 299 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + YQ +T+ G+S + + LFAGAKE+ TI YE+ I F IDWG Sbjct: 300 -DERRDIYQTDVVLPTVTLAAGESTSASTQLFAGAKEWATIREYERG-GIAGFLDSIDWG 357 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WF+F KP+F ++ + +GN G+AI+ T +K+L FPLA K Y S A MK +QP+++ Sbjct: 358 WFFFFTKPIFAVLHWLNAAIGNMGVAIIALTFLLKILVFPLAYKSYASMARMKELQPEME 417 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +LRE+ Q +QK M++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RH+ Sbjct: 418 KLRERAGDDR-QKMQKEMMELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHSA 476 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPP 511 F+G +DL+A DPT+++ LFG+LP+ P + +GI PI++ +SM++Q K++P P Sbjct: 477 FFGPFQDLSAPDPTSLYNLFGLLPWGAPAPDSLLALVFIGILPILLGISMWLQQKLNPAP 536 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 AD+ Q MI WMP VF+F L F +GL++YW +NVI+ QQ +IM+ HG + ++ Sbjct: 537 ADETQKMIFAWMPWVFMFMLGGFASGLVVYWITNNVITFTQQYLIMRSHGYTPDVFGNIK 596 Query: 572 STFSKNYNSQ 581 S+F + ++ Sbjct: 597 SSFKRGEKAE 606 >gi|260577136|ref|ZP_05845113.1| 60 kDa inner membrane insertion protein [Rhodobacter sp. SW2] gi|259020610|gb|EEW23929.1| 60 kDa inner membrane insertion protein [Rhodobacter sp. SW2] Length = 646 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 224/596 (37%), Positives = 346/596 (58%), Gaps = 28/596 (4%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEM---NNERKNIQTVKQPNQVDNSYAAVLID 59 +N N +A ALS +++ W F ++P E + N + P D + AA Sbjct: 4 QNKNLILATALSFLVILVW--FVLFPPPEPVVDPNAPAISATEALTPPVADQTTAATTE- 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A A+ +PR+ + P L GSI++ G + DDL+L+GY + S IV LLSP +A Sbjct: 61 -PAAAVPETPRLTIDTPLLQGSISMLGGRIDDLSLKGYKESLDPASDIVRLLSPVGKDSA 119 Query: 120 YFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y+A + + N ++P +NT W L +G L P P+ L + N + F RTI++D+H Sbjct: 120 YYALYGWAPGGDLANEDVPGANTEWKLAAGTSLAPGQPVTLAWDNGKGLNFTRTIAIDDH 179 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y+F + V N + ++R +P G + RH KP N + + EG + D L E KY D Sbjct: 180 YMFTVTQGVENTTGAEVRLAPYGIVARHGKPAGLQNFYVLHEGVVGRT-DGKLEEVKYKD 238 Query: 237 I-------EKSSISNFHE--SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + + + E ++ W+G +DKYW + IP++ F S KY++ YQ Sbjct: 239 LVDLPVVEREGAQAEVVEATTDGWIGFTDKYWMTTLIPAQGKPFTSVTKYVASADI-YQV 297 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + PG TT+ LFAGAKE+ TI Y+ D +P F IDWGWF+F+ KPMF Sbjct: 298 ETREPVLVVAPGAKAETTSRLFAGAKEWATIRGYQNDAGVPGFIDSIDWGWFFFLTKPMF 357 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ L+GN G+AI+ T+ +K++ FPLA K YVS A MK +QP+I+ ++E+ Sbjct: 358 WVLHNLNALIGNMGLAIIGLTLVLKVIVFPLAYKSYVSMARMKELQPEIEAMKERVGDD- 416 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q +Q M++LYK +NP AGC P+L+QIP+FF++YKVI ++LE+RHAPF+GW+ DL+A Sbjct: 417 KQKVQVEMMKLYKEKKVNPAAGCLPVLIQIPIFFSLYKVIFVTLELRHAPFFGWLTDLSA 476 Query: 468 ADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 D +++F FG+ P+ P + +G+ PI++ +SM++Q K++P PAD Q MI Sbjct: 477 RDSSSLFNFFGLAPWAAPEHGTLLATIFIGLLPILLGISMWLQQKLNPAPADPTQQMIFA 536 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 WMP VF+F L SF +GL++YW +NVI+ QQ +IM+ HG + ++S F K Sbjct: 537 WMPWVFMFMLGSFASGLVLYWITNNVITFTQQYIIMRSHGHHPDIFGNIKSGFKKK 592 >gi|315498839|ref|YP_004087643.1| membrane protein insertase, yidc/oxa1 family [Asticcacaulis excentricus CB 48] gi|315416851|gb|ADU13492.1| membrane protein insertase, YidC/Oxa1 family [Asticcacaulis excentricus CB 48] Length = 658 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 225/606 (37%), Positives = 355/606 (58%), Gaps = 33/606 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE---RKNIQTVKQPNQVDNSYAAVLI 58 + N N F+ +ALS+ I++ +Q F P++E+ +K I+ K P S Sbjct: 4 DDNRNMFIFLALSMAILFGYQFFVAGPQMEKERAAAMAQKKIEAAKSPVATPESLFVEGK 63 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R QA++ +PRV + +P+L GS++L GA+ DDL L+ Y + ++SP V L P ++ Sbjct: 64 LPRDQAVAATPRVAIDSPALKGSLSLAGARIDDLFLKQYKETLKADSPNVELFRPQGAEH 123 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 AY+AE +V AN LP+ N+VW ++SG +L+P + L + + FER +SLD+ Y Sbjct: 124 AYYAESGWVG-ANVPGLPSGNSVWTVVSGSVLSPGKDVVLGYDAGTGLRFERRLSLDDKY 182 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLV------E 231 + + DTV N + + +P ++R P+T + EG I + E Sbjct: 183 MITVTDTVVNTTGAAVTLAPYANVVRQGAPETLGKNMILHEGGIGAFSKDATGKGYTTPE 242 Query: 232 QKYSDIEKSSI-SNFH--ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR---- 284 K+ + EK +NF + W+G++DKYW + IP ++ H+ K A Sbjct: 243 FKFHNWEKDEKKANFKADSTGGWMGLTDKYWLAAVIPDQKAKIHASMKATDQTTANEKDF 302 Query: 285 ---YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 YQA + A+ +T+ PGK ++ T +FAGAK+ + Y+ L +P F+ IDWG F+F Sbjct: 303 NFLYQAGYVADAVTVQPGKPVSVTYHIFAGAKQASLLAAYQDKLKLPAFDKAIDWGMFWF 362 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +PMF ++ + + VGNFG+AI+ TV VKL+FFPLA K Y S MK +QP+++EL++ Sbjct: 363 FTRPMFFVLDFLFKYVGNFGLAILGLTVLVKLIFFPLAHKSYESMTKMKMLQPQVEELKK 422 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K + +P Q +Q M+ LY+ +NP++GC PI +Q+PVF+A+YKV+ +++EMRHAPF+GW Sbjct: 423 KHEGNPQQ-MQIEMMGLYQKEKVNPMSGCLPIFVQMPVFYALYKVLFVTIEMRHAPFFGW 481 Query: 462 IKDLAAADPTNIFTLFGILPF---YLP---GFM----HVGIWPIIMSLSMFIQMKMSPPP 511 I+DL+ DPT +F LFG+LP+ LP G M H+GI P++ SM++ M+PP Sbjct: 482 IQDLSDKDPTTMFNLFGLLPYDPAALPVIGGLMATSLHIGILPLLYGASMWLSQSMNPPM 541 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D Q I +MPV+F F ++ F +GL+IYW W+NV+++ QQ ++M+ G E ID L Sbjct: 542 PDPMQRKIFAFMPVMFTFIMAPFASGLLIYWIWNNVLTVAQQYMLMRQMGVE-NPIDTLL 600 Query: 572 STFSKN 577 +K Sbjct: 601 GKVAKT 606 >gi|40062654|gb|AAR37575.1| inner membrane protein, 60 kDa [uncultured marine bacterium 313] Length = 560 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 216/558 (38%), Positives = 335/558 (60%), Gaps = 15/558 (2%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID---DRA 62 N +AI LS +++ W F+ P +E E Q K S V + +R Sbjct: 5 NVLIAIVLSTLVLVFWATFFEPPPVERQIVED---QITKSEEPSSPSIEKVELSKKIERN 61 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 A+ RV+++N ++ GSI+L+GA DD+ + Y + S+ ++ L+P ++ Y+ Sbjct: 62 DAIDSVARVKIENNNIKGSISLQGAIIDDIIFKNYKESLESDQKVI-FLNPKSSDEGYYI 120 Query: 123 ELDYVSTANN-IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 E + S +N ++LP NT+W + K+LTP PI L + N ++F + I LD+ YLFK Sbjct: 121 ETGWASNSNEKLKLPLDNTIWKVKGNKVLTPNNPIVLEWDNNEGLIFTKKIELDDKYLFK 180 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 I + N S F P +I R+ + + EGFI + D+ L E+ Y D+E Sbjct: 181 ISQGIKNTSNKSYEFFPYAQITRNYKPDVIPIYILHEGFIGMFDDE-LKEEDYKDVEDEK 239 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK- 300 + S WLGI+DKYW + +P K F S+F + DG +Y+A F E T+L Sbjct: 240 FI-INSSKGWLGITDKYWLTAIVPEKGKKFKSEFLSI-DG--KYKANFIIKEPTVLSSNA 295 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 SIT F AKE I Y + L+I +F++ IDWGWFYFI KP+F ++ YF+ L GNF Sbjct: 296 SITNEINAFVMAKEVAVIDGYAERLSIEKFDLTIDWGWFYFITKPLFFVIEYFFKLTGNF 355 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI++ T V+++FFPL+ + S A MK +QP++ L+E K + LQ+ M+ LYK Sbjct: 356 GVAIIILTALVRIVFFPLSNYSFRSMAKMKILQPEMIRLKELHKDDKTK-LQQEMMALYK 414 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP++GC P+L+QIP FFA+YK++ +++EMR PF+GWI+DL+A DPT+IF LFG++ Sbjct: 415 REKVNPISGCLPVLIQIPFFFAVYKMLYVTIEMRQQPFFGWIQDLSARDPTSIFNLFGLI 474 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 P+ P F+ +G+WPI+M L+MF+Q K++P P D QA I ++P+ L+ FP+GL++ Sbjct: 475 PWDPPTFLMIGVWPILMGLTMFLQQKLNPTPPDPMQAKIFMFLPIFLTIILAPFPSGLVV 534 Query: 541 YWSWSNVISIVQQAVIMK 558 YW+ SNV+++ QQ VI++ Sbjct: 535 YWTISNVLTMAQQWVIIR 552 >gi|126737055|ref|ZP_01752790.1| putative inner membrane protein translocase component YidC [Roseobacter sp. SK209-2-6] gi|126721640|gb|EBA18343.1| putative inner membrane protein translocase component YidC [Roseobacter sp. SK209-2-6] Length = 601 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 222/604 (36%), Positives = 341/604 (56%), Gaps = 30/604 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYP------RIEEMNNERKNIQTVKQPNQVDNSYAA 55 ++N N +A LS +++ W F+ P + N ++ T+ ++ A Sbjct: 3 DQNKNLILATVLSFLVILGWYTFFPPPEPEQPVDVAVTENAAESGTTLVPTADATDAVAN 62 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 ++ + +PR+ + P + GSI L+G + DDL+L+ Y ++ SPIV LL P Sbjct: 63 ATTEEASA--PDAPRLAIDTPRVTGSIALQGGRIDDLSLKDYRETLADGSPIVKLLKPVG 120 Query: 116 TKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 AY+A + A + ++P +N++W+ +G L+P TP+ L + N N + F RTIS Sbjct: 121 EAQAYYALYGWAPGAGLTSSDVPGANSIWSAPAGATLSPETPVTLTWDNGNGLTFARTIS 180 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQ 232 +DE Y+F + +VTN + I +P G + RH +P+ N F + EG + + D L E Sbjct: 181 VDEDYMFSVTQSVTNATDGTISLAPYGTLARHGEPEDLKNFFILHEGVVG-MADGELSEL 239 Query: 233 KYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 YSD+ I S N W+G +D YW S IP F S K+ + Sbjct: 240 DYSDVADFDIDPRDGSRSEVKQVTTNGWIGFTDHYWMSTLIPEPGQGFRSIAKF-DERRG 298 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 YQ +++ G S T LFAGAKE+ +I YEK I F IDWGWF+F+ Sbjct: 299 IYQTDIVLPTVSLAAGNSTEVTTMLFAGAKEWASIRSYEKS-GIAGFLDSIDWGWFFFLT 357 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KPMF ++ + L+GN G AI+ TV +K++ FPLA K Y S A MK +QP++++L+E+ Sbjct: 358 KPMFAVLHWLNLLIGNMGWAIIGLTVLIKIIVFPLAYKSYASMAKMKELQPEMEKLKERT 417 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q +QK M++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G + Sbjct: 418 GDDR-QKMQKEMMELYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQ 476 Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+A DPT++ LFG+LPF P + +GI P+++ +SM++Q K++P P D Q Sbjct: 477 DLSAPDPTSLMNLFGLLPFSGPEAGSILALVFIGILPLLLGISMWLQQKLNPAPTDPTQQ 536 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG + + ++S F K Sbjct: 537 MIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSGFKKK 596 Query: 578 YNSQ 581 S+ Sbjct: 597 PKSE 600 >gi|114770125|ref|ZP_01447663.1| putative inner membrane protein translocase component YidC [alpha proteobacterium HTCC2255] gi|114548962|gb|EAU51845.1| putative inner membrane protein translocase component YidC [alpha proteobacterium HTCC2255] Length = 612 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 227/614 (36%), Positives = 353/614 (57%), Gaps = 47/614 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIE-------EMNNERKNIQTVKQPNQVDNSYA 54 + N N +A LS++++ W FY +P+ + ++ I S Sbjct: 4 DNNKNMILASVLSMLVLLTW--FYFFPQEDYQPVATNQITASENGIAAAPTAGNGIASAP 61 Query: 55 AV---LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A+ + + R AL + RVE+++ + GS++L GA+ DDL L Y++ ++ S VTLL Sbjct: 62 AISTTVAETREIALEKTKRVEIRSNRIKGSLSLTGARIDDLKLLDYNVKLNDTSEKVTLL 121 Query: 112 SPSNTKNAYFAELDYVSTANNIE---LPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 SP+ +AY+ L S A +++ +P + T+W++ +G ILTP + + L + N+N ++F Sbjct: 122 SPAGGPSAYYI-LHGFSPAGSLDFDDVPTATTIWSVENGNILTPNSSVTLKWDNSNGLVF 180 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE---------- 218 R I +D+ Y+F I +V NN+ I +P G I + P A +G QE Sbjct: 181 YRKIEVDDDYMFTITQSVQNNTNANISLAPYGLIAQKGP-IARAAYGRQESSKNGVYILH 239 Query: 219 -GFIAVLGDKSLVEQKYSDIEKSSISNFHESN---------SWLGISDKYWASVFIPSKE 268 G + G SL E YSD+ S+ +N W+G + KYW + IP Sbjct: 240 EGIVLQTG-SSLEEIDYSDMPDEDFSSSERANLKVVDSTKKGWIGFTGKYWMTTLIPDN- 297 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 ++F + KY ++G RYQA+ I IL G+ + LFAGAKE+ TI HY + Sbjct: 298 SAFKAVSKY-TEGADRYQAEARQETIQILAGQRRDVQSRLFAGAKEYATIQHYGDKEGVT 356 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F IDWG F+FI KPMF L+ + L+GN G AI+ T+ +K + FPLA K +VS A Sbjct: 357 DFVDSIDWGMFFFITKPMFALLHFLNGLIGNMGWAIIALTLIIKTILFPLAYKSFVSMAR 416 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 MK +QP++++L+EK + Q +QKA +++Y+T +NP AGC PILLQIP+FF++YKVI Sbjct: 417 MKELQPEMEKLKEKHGED-RQAMQKATMEMYRTKKVNPAAGCLPILLQIPIFFSLYKVIF 475 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMF 502 ++LE+RHAPF GW+KDL+ DP+++ LFG++P+ PG + +G+WPI+M ++M+ Sbjct: 476 VTLELRHAPFIGWLKDLSVPDPSSLLNLFGLMPWDAPGPNSFFVILSIGVWPILMGITMW 535 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +Q K++P P DK QAMI WMP VF+F L F +GL+IYW +N ++ +QQ IM+ G Sbjct: 536 LQQKLNPAPTDKTQAMIFAWMPWVFMFMLGGFASGLVIYWVANNTLTFMQQYTIMRSQGV 595 Query: 563 EIGLIDRLRSTFSK 576 ++ + F K Sbjct: 596 NPDILGNMFKRFKK 609 >gi|89068160|ref|ZP_01155577.1| putative inner membrane protein translocase component YidC [Oceanicola granulosus HTCC2516] gi|89046399|gb|EAR52456.1| putative inner membrane protein translocase component YidC [Oceanicola granulosus HTCC2516] Length = 597 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 218/597 (36%), Positives = 350/597 (58%), Gaps = 36/597 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEE---MNNERKNI---------QTVKQPNQV 49 ++N N +A ALS I++ W F ++P E+ + N + + + Sbjct: 3 DQNKNLILATALSFIVILIW--FVLFPPPEQAPGLTNAEGEVVAQDDTALRDEMSPDGAI 60 Query: 50 DNSYAAVLIDDRAQ-ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 D + A + Q A + RV ++ P L+GSIN G + DDL L YH + +SP+V Sbjct: 61 DGTAAGTPVATLEQDAPVEAARVAIETPRLVGSINTAGGRIDDLKLTAYHETLDPDSPLV 120 Query: 109 TLLSPSNTKNAYFAELDYV--STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 LLSP + Y+A ++ S A+ E+P +TVW + G+ LTP +P+ L ++N + Sbjct: 121 RLLSPGGEEAQYYALHGWIALSGASADEVPGDSTVWEIEEGETLTPDSPVVLRWENGAGL 180 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 +F +TI++D++YLF + +V N + D + P G++ RH + F + EG + + D Sbjct: 181 VFRKTIAVDDNYLFTVTQSVENTTGDAVELRPYGQVRRHGLPDSRQFFILHEGVVR-MAD 239 Query: 227 KSLVEQKYSDI-----EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 L E Y D+ E+S I + W+G +DKYW + +P+ T F S + + Sbjct: 240 GELEEIDYDDLPDLTAEESRIEV--AEDGWVGFTDKYWMTTLVPASGTPFRSVAREV--- 294 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + Y + + + G++++ + +FAGAKE+ TI YE I RF IDWGWF+F Sbjct: 295 NGIYLTESIYPPVAVAAGETVSAESHVFAGAKEWETIRAYEA-AGIDRFVDSIDWGWFFF 353 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP+F L+ + ++GN G +I++ T+ +K + FPLA K Y S A MK +QP++++L+E Sbjct: 354 LTKPIFALLHWLNGVIGNMGWSIIVLTLIIKAVLFPLAYKSYASMAKMKELQPEMEKLKE 413 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + Q LQK M++LYKT+ +NP +GC PILLQIP+FF++YKVI ++LE+RHAP+ GW Sbjct: 414 RAGDDR-QALQKGMMELYKTNKVNPASGCLPILLQIPIFFSLYKVIFVTLELRHAPWIGW 472 Query: 462 IKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 I+DL+A DP++I LFG+LP+ P +G+ PI++ +SM++Q K++P P D Sbjct: 473 IRDLSAPDPSSILNLFGLLPWDTPDPGSIFFIFSLGVLPILLGISMWLQQKLNPAPPDPT 532 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 Q MI WMP VF+F L SF +GL+IYW +N+I+ QQ +IM+ HG + ++ +R Sbjct: 533 QRMIFAWMPWVFMFMLGSFASGLVIYWIANNMITFTQQYLIMRSHGYKPDILGNIRG 589 >gi|295690947|ref|YP_003594640.1| membrane protein insertase [Caulobacter segnis ATCC 21756] gi|295432850|gb|ADG12022.1| membrane protein insertase, YidC/Oxa1 family [Caulobacter segnis ATCC 21756] Length = 618 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 215/554 (38%), Positives = 317/554 (57%), Gaps = 40/554 (7%) Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 N A L R QA + SPR+ + P+L GSI LKG + DDL LR Y + NSP V L Sbjct: 59 NGNPAPLRLSRDQAKAQSPRIVVDTPALSGSIALKGGRIDDLFLRKYAETTAKNSPPVEL 118 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 P ++A+FA+ + AN LP+S TVW G++L P +P+ L + N + F R Sbjct: 119 FRPEGAEHAWFADFGWAG-ANLPGLPDSRTVWTAAPGQVLRPNSPVTLTYDNGMGLTFTR 177 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG----VQEGFIAVLG- 225 I++D+ +F + D+V NN + +P + R Q T+ G V EG I VLG Sbjct: 178 VIAVDDQAMFSVTDSVKNNGTAAFQLAPYATVQR---QGITDHLGKTQIVHEGAIGVLGS 234 Query: 226 --DKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DG 281 D+ L KY +K ++ F W GI+DKYW + IP + + +Q++ + G Sbjct: 235 GKDQKLELAKYQKWKKDKPLTTFDSVGGWAGITDKYWLAALIPGQTEAIKAQYRVTNVAG 294 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA--------------- 326 Y F + PG ++T T LFAGAK P + Y+ A Sbjct: 295 VDVYDVNFVGPTQALNPGATLTQTTRLFAGAKTVPLLRKYQYGGAKPPAWWEFWSNAKAE 354 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 IPRF+ +DWG F +P+F ++ FY +VGNFG+AI+ TV +KL+ +P+A K Y S Sbjct: 355 IPRFDWAVDWGMFSMFTRPIFNVLEIFYKMVGNFGLAILALTVLLKLILYPMADKSYESM 414 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A MK I P++++L+ K K P + Q+ M+ LY+ INP+ GC P+L+QIPVF+A+YKV Sbjct: 415 AKMKKIAPEVEKLKAKHKDDPAK-QQQEMMALYQKEKINPMMGCLPMLIQIPVFYALYKV 473 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF----------YLPGFMHVGIWPII 496 +++++EMRHAPF+GWI+DL+A DP+ IF LFG +P+ +L G +H+G+WP++ Sbjct: 474 LTVTIEMRHAPFFGWIQDLSARDPSTIFNLFGAIPWDPATAPLIGGFLGGPLHIGVWPLL 533 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +M++ M+PP D Q I P++F F LS F GL+IYW WSNV++IVQQ V+ Sbjct: 534 YGFTMWLTTAMNPPAGDPIQQKIFQLFPIIFTFTLSQFAVGLVIYWCWSNVLTIVQQYVM 593 Query: 557 MKMHGAEIGLIDRL 570 M+ + E IDR+ Sbjct: 594 MRRYKVE-NPIDRI 606 >gi|114327390|ref|YP_744547.1| 60 kDa inner membrane protein YIDC [Granulibacter bethesdensis CGDNIH1] gi|122327634|sp|Q0BU78|OXAA_GRABC RecName: Full=Inner membrane protein oxaA gi|114315564|gb|ABI61624.1| 60 kDa inner membrane protein YIDC [Granulibacter bethesdensis CGDNIH1] Length = 578 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 224/569 (39%), Positives = 327/569 (57%), Gaps = 27/569 (4%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 F+AIA+S+ I+ +Q Y + + E + Q + +N+ AV D A S Sbjct: 7 FLAIAISLGILLGFQGLYRH-FVPEPPAAARTATNAGQ-GKPNNTLGAVPTDATA---SQ 61 Query: 68 SP------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 SP R+ + P + GSI+L GA+FDDL LR YH V NSP+V LL+P + Y+ Sbjct: 62 SPPPKEGARLAVDAPRVKGSISLVGARFDDLVLRDYHETVDKNSPLVRLLAPLSGDEPYY 121 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 E +V + I P +T W LTP P+ L + N + F +++D Y+F Sbjct: 122 VEYGWVPEESGIATPGRDTEWK-ADAATLTPNKPVTLSWDNGAGLTFMLKVAVDADYMFS 180 Query: 182 IVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + +V N + + P R+ R ++P+ T + EG I V+ D L E Y + Sbjct: 181 VTQSVRNTTGKPVVLHPYARVRRDYRPEVEGYTV-LHEGLIGVV-DGILHEITYKSADSD 238 Query: 241 SISN------FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKF-SAN 292 N + W GI+DKYW + IP + TS F+ +G YQ S N Sbjct: 239 GAKNNGLAFEHASTGGWAGITDKYWLTALIPDQITSVDFSFRDTKPNGRDGYQVGIISHN 298 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + G +T LFAGAK + HY+ + IP F +D+GWF+FI +P F + + Sbjct: 299 PDQVAAGAESASTTHLFAGAKVVSLLDHYQAEYHIPSFWEAVDFGWFWFITRPFFYALDW 358 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 Y+LVGNFG+AI++ TV VK F+PLA K Y S + M+ + PKI LRE++K P ++ Q Sbjct: 359 LYHLVGNFGVAILIFTVLVKAAFYPLASKSYRSMSKMRLLAPKIQSLRERYKDDPTRMQQ 418 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M QLYK NP +GC P+LLQ P+FF++YKVI +++EMRHAPF+GWI DL+A DPTN Sbjct: 419 EVM-QLYKAEGANPASGCLPMLLQFPIFFSLYKVIFVTIEMRHAPFFGWIHDLSAVDPTN 477 Query: 473 IFTLFGILPF---YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 +F LFG+LPF ++ F+H+GIWP+IM +M++Q KM+PP D QA + +MP++F F Sbjct: 478 LFNLFGLLPFDPTHISPFLHLGIWPLIMGGTMYLQQKMNPPMPDPVQARMFQFMPIIFTF 537 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 L+ FP GL+IYWSW+N++SI QQ +I + Sbjct: 538 MLARFPVGLVIYWSWNNLLSIGQQWLIQR 566 >gi|294010745|ref|YP_003544205.1| preprotein translocase YidC subunit [Sphingobium japonicum UT26S] gi|292674075|dbj|BAI95593.1| preprotein translocase YidC subunit [Sphingobium japonicum UT26S] Length = 567 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 211/565 (37%), Positives = 323/565 (57%), Gaps = 12/565 (2%) Query: 1 MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N +A+ L+ I++ W Q F+ E + + A Sbjct: 1 MDDKKNIILAVVLTAAILFGWPYVAQYFFPAANPPATKIEGGKTTPLTPSGAAPAAEGAA 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 I D A L SPRV ++ P + GSINLKGA+ DD+ L Y ++ +SP + L SPS T Sbjct: 61 AIRDLALVLKDSPRVAIRTPKITGSINLKGARIDDIVLPTYKETIAKSSPAIRLYSPSGT 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 K+AYFA + ++ P+ TVW S K LTPT+P+ L + N FE S+DE Sbjct: 121 KHAYFAGFGW--QGEGVKTPDGGTVWT-ASAKELTPTSPVTLSWNNGAGQTFEIRYSIDE 177 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 +Y+ V+N + G + R P +T+ + G + V + + YSD Sbjct: 178 NYMITAQQKVSNGGAGAVGVKSYGYVSRATPSADPDTWTIHVGPMGVFNGAANYDVNYSD 237 Query: 237 IEKS-SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +EK + +F + W+G +DKYW S IP ++ +F Q + ++Q S I Sbjct: 238 LEKGPATQSFQSTGGWIGFTDKYWLSALIPDQKAAFTGQMR--KGAGTQFQTDMSLAPIM 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PGK++T TN LF GAKE T+ Y+ D +P F+ IDWGWFY+ KP+F L+ + + Sbjct: 296 VAPGKAVTQTNRLFVGAKEVKTLEAYQ-DAGVPLFDRAIDWGWFYWFEKPIFALLHWLFE 354 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +GNFG+AI+ T V+ L FP+A++Q+ S A M+ +QPK+ L+EK+K P+ LQ+ M Sbjct: 355 HIGNFGVAIICLTFVVRGLMFPVAQRQFASMAAMRAVQPKMKALQEKYKDDKPR-LQQEM 413 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NPLAGC PI +QIP+FFA+YKV+ +++EMRH PF WIKDL+A DP +I Sbjct: 414 MELYKREKVNPLAGCLPIFIQIPIFFALYKVLQLTIEMRHQPFVLWIKDLSAPDPLHIVN 473 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+LPF P F+ +G+ +++ +SM+ Q K++P D Q + MP + +F ++ F Sbjct: 474 LFGLLPFTPPAFLGIGVLALLLGISMYFQFKLNPAQMDPMQQQVFAIMPWMMMFIMAPFA 533 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 AGL++YW +N +S++QQ + K H Sbjct: 534 AGLLVYWITNNCLSMLQQWWLYKRH 558 >gi|163739492|ref|ZP_02146902.1| 60 kDa inner membrane insertion protein [Phaeobacter gallaeciensis BS107] gi|161387245|gb|EDQ11604.1| 60 kDa inner membrane insertion protein [Phaeobacter gallaeciensis BS107] Length = 605 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 210/531 (39%), Positives = 315/531 (59%), Gaps = 22/531 (4%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 PR+ ++ P + G+I+L G + DDL+L+ Y + + ++ IV +LSP+ NAY+A + Sbjct: 77 PRLAIETPRVSGTISLLGGRLDDLSLKDYRVSLEEDAAIVKMLSPAGDPNAYYALYGWAP 136 Query: 129 TAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTV 186 A ++P +NT+W LTP +P+ L + N + F RTI++D+ YLF I +V Sbjct: 137 GAGLGPDDVPGANTLWQAGGDATLTPDSPVTLTWDNGKGLTFNRTIAVDQDYLFTITQSV 196 Query: 187 TNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 TN S + + +P G + RH +PQ N F + EG I + D +L E Y D+ + Sbjct: 197 TNASGNTVALAPYGTLARHGEPQDLKNFFILHEGVIG-MADGTLAEIDYDDMTDFEVDAR 255 Query: 246 H---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 E+N W+G +D YW S +P +F S K+ + YQ +T+ Sbjct: 256 SGARAEVTQVETNGWIGFTDHYWMSTLVPEPGQAFRSIAKF-DERREIYQTDIVLPTVTV 314 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G++ T LFAGAKE+ TI Y+KD I F IDWGWF+F+ KP+F ++ + L Sbjct: 315 ADGETSEATTMLFAGAKEWATIRGYQKD-GIEGFLDSIDWGWFFFLTKPIFAVLHWLNAL 373 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GN G AI+ TV +KLL FPLA K Y S A MK +QP+++E++EK Q LQ+ M+ Sbjct: 374 IGNMGWAIIGLTVLIKLLVFPLAYKSYASMAKMKELQPRMEEIKEKAGDDR-QKLQQEMM 432 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G +DL+A DPT+I L Sbjct: 433 ALYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQDLSAPDPTSIMNL 492 Query: 477 FGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 FG+LP P + +GI PI++ +SM++Q K++P P D Q MI WMP VF+F Sbjct: 493 FGLLPMAAPVEGTLMATIFIGILPILLGISMWLQQKLNPAPTDPTQQMIFAWMPWVFMFM 552 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 L F +GL++YW +N I+ QQ +IM+ HG + + ++S F K ++ Sbjct: 553 LGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSGFKKTPKAE 603 >gi|91762399|ref|ZP_01264364.1| putative inner membrane protein translocase component YidC [Candidatus Pelagibacter ubique HTCC1002] gi|91718201|gb|EAS84851.1| putative inner membrane protein translocase component YidC [Candidatus Pelagibacter ubique HTCC1002] Length = 558 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 213/559 (38%), Positives = 338/559 (60%), Gaps = 18/559 (3%) Query: 6 NYFVAIALSVIIVYAWQNFY------VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 N AI+LS ++ + F+ + + E N N T P+ N + L Sbjct: 5 NVIAAISLSAAVIILYSLFFQPDPATIKKNLAEQNKIENNEDT---PSLDKNENFSKL-- 59 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 RA AL + R++ +N S++GSI+LKGA DDL + Y+++++ N I TLLSP N ++ Sbjct: 60 SRADALKENDRIQFENGSVVGSISLKGAAIDDLTFKEYNIELNRNEKI-TLLSPRNVEDG 118 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 Y E +VST NI++P+++TVW + LT P+KL + N I FE+ ISLD+ +L Sbjct: 119 YLIESGFVSTNKNIDIPDASTVWEVSGNNKLTNNNPVKLTWSNTQGITFEKHISLDDQFL 178 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F + + + N+S F G+I+R++ + + + EGF++VL D+ L+E+ Y DI+ Sbjct: 179 FTVKEKIINSSDKSYNFYSYGQIIRNEIPEISGFYILHEGFLSVLDDE-LIEEDYDDIQD 237 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + + + ++ ISDK+W + IP K F + F Y + A Y S I + Sbjct: 238 KKFTQIAQ-DGFVAISDKFWVTSVIPPKGKEFKTTFDYKNKFRANY---ISTKGIEVKAN 293 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 SI + AK I Y ++L I +F++ IDWG+ YFI KP+F ++ YF+ L+GN Sbjct: 294 SSIEEKIQIIVAAKRVNVIDGYAENLNINKFDLAIDWGFMYFITKPLFFVLDYFFKLLGN 353 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G+AI+ T+ ++L FFPLA + S MK + P++ L+E K + LQ+AM+ LY Sbjct: 354 YGLAIIAVTICIRLAFFPLANFSFKSMGKMKLLAPEMARLKELHKDDKMK-LQQAMMALY 412 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NP++GC PIL+QIPVFFA+YKV+ +++EMRH PF+GWI DL+ DPT++F +FG+ Sbjct: 413 KKEKVNPMSGCLPILVQIPVFFALYKVLFVTIEMRHMPFYGWIHDLSDRDPTSLFNVFGL 472 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 +P+ P F+ +G WPIIM ++M+IQ K++P P D QA I + PV L+ FPAGL+ Sbjct: 473 IPWDPPSFLLIGAWPIIMGITMWIQQKLNPTPPDPIQAKIFMFFPVFLTVILAPFPAGLV 532 Query: 540 IYWSWSNVISIVQQAVIMK 558 IYWS++N+ +++QQ ++ + Sbjct: 533 IYWSFNNIFTMIQQYIVQR 551 >gi|71083172|ref|YP_265891.1| putative inner membrane protein translocase component YidC [Candidatus Pelagibacter ubique HTCC1062] gi|123647065|sp|Q4FNF1|OXAA_PELUB RecName: Full=Inner membrane protein oxaA gi|71062285|gb|AAZ21288.1| 60 kDa inner membrane protein [Candidatus Pelagibacter ubique HTCC1062] Length = 558 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 213/559 (38%), Positives = 338/559 (60%), Gaps = 18/559 (3%) Query: 6 NYFVAIALSVIIVYAWQNFY------VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 N AI+LS ++ + F+ + + E N N T P+ N + L Sbjct: 5 NVIAAISLSAAVIILYSLFFQPDPATIKKNLAEQNKIENNEDT---PSLDKNENFSKL-- 59 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 RA AL + R++ +N S++GSI+LKGA DDL + Y+++++ N I TLLSP N ++ Sbjct: 60 SRADALKENDRIQFENGSVVGSISLKGAAIDDLTFKEYNIELNRNEKI-TLLSPRNVEDG 118 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 Y E +VST NI++P+++TVW + LT P+KL + N I FE+ ISLD+ +L Sbjct: 119 YLIESGFVSTNKNIDIPDASTVWEVSGNNKLTNNNPVKLTWSNTQGITFEKHISLDDQFL 178 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F + + + N+S F G+I+R++ + + + EGF++VL D+ L+E+ Y DI+ Sbjct: 179 FTVKEKIINSSDKSYNFYSYGQIIRNELPEISGFYILHEGFLSVLDDE-LIEEDYDDIQD 237 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + + + ++ ISDK+W + IP K F + F Y + A Y S I + Sbjct: 238 KKFTQIAQ-DGFVAISDKFWVTSVIPPKGKEFKTTFDYKNKFRANY---ISTKGIEVKAN 293 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 SI + AK I Y ++L I +F++ IDWG+ YFI KP+F ++ YF+ L+GN Sbjct: 294 SSIEEKIQIIVAAKRVNVIDGYAENLNINKFDLAIDWGFMYFITKPLFFVLDYFFKLLGN 353 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G+AI+ T+ ++L FFPLA + S MK + P++ L+E K + LQ+AM+ LY Sbjct: 354 YGLAIIAVTICIRLAFFPLANFSFKSMGKMKLLAPEMARLKELHKDDKMK-LQQAMMALY 412 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NP++GC PIL+QIPVFFA+YKV+ +++EMRH PF+GWI DL+ DPT++F +FG+ Sbjct: 413 KKEKVNPMSGCLPILVQIPVFFALYKVLFVTIEMRHMPFYGWIHDLSDRDPTSLFNVFGL 472 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 +P+ P F+ +G WPIIM ++M+IQ K++P P D QA I + PV L+ FPAGL+ Sbjct: 473 IPWDPPSFLLIGAWPIIMGITMWIQQKLNPTPPDPIQAKIFMFFPVFLTVILAPFPAGLV 532 Query: 540 IYWSWSNVISIVQQAVIMK 558 IYWS++N+ +++QQ ++ + Sbjct: 533 IYWSFNNIFTMIQQYIVQR 551 >gi|163740285|ref|ZP_02147679.1| putative inner membrane protein translocase component YidC [Phaeobacter gallaeciensis 2.10] gi|161386143|gb|EDQ10518.1| putative inner membrane protein translocase component YidC [Phaeobacter gallaeciensis 2.10] Length = 605 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 210/531 (39%), Positives = 313/531 (58%), Gaps = 22/531 (4%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 PR+ ++ P + G+I+L G + DDL+L+ Y + + ++ IV +LSP+ NAY+A + Sbjct: 77 PRLTIETPRVSGTISLLGGRLDDLSLKDYRVSLEEDAAIVKMLSPAGDPNAYYALYGWAP 136 Query: 129 TAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTV 186 A ++P +NT+W LTP +P+ L + N + F RTI++D+ YLF I +V Sbjct: 137 GAGLGPDDVPGANTLWQAEGDATLTPDSPVTLTWDNGKGLTFNRTIAVDQDYLFTITQSV 196 Query: 187 TNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 TN S + +P G + RH +PQ N F + EG I + D +L E Y D+ + Sbjct: 197 TNASGSTVALAPYGTLARHGEPQDLKNFFILHEGVIG-MADGTLAEIDYDDMTDFEVDAR 255 Query: 246 H---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 E+N W+G +D YW S +P +F S K+ + YQ +T+ Sbjct: 256 SGARAEVTQVETNGWIGFTDHYWMSTLVPEPGQAFRSIAKF-DERREIYQTDIVLPTVTV 314 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G + T LFAGAKE+ TI Y+KD I F IDWGWF+F+ KP+F ++ + L Sbjct: 315 AAGDTSEVTTMLFAGAKEWATIRGYQKD-GIEGFLDSIDWGWFFFLTKPIFAVLHWLNAL 373 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GN G AI+ TV +KLL FPLA K Y S A MK +QP+++E++EK Q LQ+ M+ Sbjct: 374 IGNMGWAIIGLTVLIKLLVFPLAYKSYASMAKMKELQPRMEEIKEKAGDDR-QKLQQEMM 432 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G +DL+A DPT+I L Sbjct: 433 ALYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQDLSAPDPTSIMNL 492 Query: 477 FGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 FG+LP P + +GI PI++ +SM++Q K++P P D Q MI WMP VF+F Sbjct: 493 FGLLPMAAPVEGTLMATIFIGILPILLGISMWLQQKLNPAPTDPTQQMIFAWMPWVFMFM 552 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 L F +GL++YW +N I+ QQ +IM+ HG + + ++S F K ++ Sbjct: 553 LGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSGFKKTPKAE 603 >gi|296535613|ref|ZP_06897793.1| inner membrane protein OxaA [Roseomonas cervicalis ATCC 49957] gi|296264068|gb|EFH10513.1| inner membrane protein OxaA [Roseomonas cervicalis ATCC 49957] Length = 524 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 201/504 (39%), Positives = 307/504 (60%), Gaps = 13/504 (2%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 R+ +++P + GS+ L+GA+ DDL L+ Y +++SP+V + +P YFA+ + S Sbjct: 9 RLRVESPRVSGSLLLRGARLDDLVLKDYRETTAASSPLVRMFAPREELQPYFAQWGWSSA 68 Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNN 189 +P++ T W SG L P +P+ L ++N F+ +SLD +Y+F+ V N+ Sbjct: 69 DGRTRVPDNETDWT-ASGGPLGPDSPVTLSWENGQGQTFQIVLSLDRNYMFQAEQRVINS 127 Query: 190 SIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF---- 245 + D + P R+ R + + + EGF+ VL + L E Y + Sbjct: 128 AADPVLVLPWSRVRRERTPHVAGFYILHEGFVGVLNGR-LNELTYKSAKDDGARTRGVAL 186 Query: 246 --HESNSWLGISDKYWASVFIP-SKETSFHSQFKYLSD-GHARYQAKFSANEI-TILPGK 300 S W G +DKYW + P + ++++++ G R+Q F+ + T+ G Sbjct: 187 EQETSGGWAGFTDKYWLAAIAPVDAAQPLRAAWRHVAENGEDRWQVDFATPQPQTVASGA 246 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + + LFAGAKE + Y +L I F+ ID+GWFYF+ KP F + Y + L GNF Sbjct: 247 TGSIATRLFAGAKEVHLLDAYRDNLGITDFDKAIDFGWFYFLTKPFFYALDYLFKLFGNF 306 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 GIAI++ TV +KL FFPLA K Y S A MK + PK+ E+RE++K P + Q M+ LY+ Sbjct: 307 GIAILVFTVALKLAFFPLANKAYKSMARMKVLTPKMQEIRERYKDDPAKA-QSEMMALYR 365 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 + +NP +GC PIL+QIPVFFA+YKV+ +++EMRHAPF+GWI+DL+A DPTN+F LFG++ Sbjct: 366 SEKVNPASGCLPILIQIPVFFALYKVLFVTIEMRHAPFFGWIRDLSAPDPTNLFNLFGLI 425 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 P+ P +H+ +W IIM ++MF+Q K++P PAD QA I WMP++F F L+SFPAGL+I Sbjct: 426 PWDPPALLHMPVWAIIMGVTMFVQQKLNPAPADPIQAKIFTWMPIIFTFMLASFPAGLVI 485 Query: 541 YWSWSNVISIVQQAVIMKMHGAEI 564 YWSW+N++S+ QQ IM+ H E+ Sbjct: 486 YWSWNNLLSVAQQWYIMR-HEREV 508 >gi|110678771|ref|YP_681778.1| putative inner membrane protein translocase component YidC [Roseobacter denitrificans OCh 114] gi|123172722|sp|Q16AA1|OXAA_ROSDO RecName: Full=Inner membrane protein oxaA gi|109454887|gb|ABG31092.1| inner membrane protein oxaA, putative [Roseobacter denitrificans OCh 114] Length = 606 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 223/602 (37%), Positives = 344/602 (57%), Gaps = 30/602 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----EMNNE-RKNIQTVKQPNQVDNSYAA 55 ++N N +A ALS I++ W + P E E + E + T P+ ++ + Sbjct: 3 DQNKNLILATALSFIVILVWFVLFPPPEPEMPLTGETSTELTPDAATGSLPSVTSDTAPS 62 Query: 56 VLIDD--RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 V+I+ R+ AL +PRVE+ + GSI+L G + DDL+L+ Y ++ IVT+LSP Sbjct: 63 VVIEGETRSAALEQAPRVEIATDRVKGSISLLGGRIDDLSLKDYRETQEEDADIVTMLSP 122 Query: 114 SNTKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + AY+A + + A + ++P +T W +I G IL+ P+ L + N + F R Sbjct: 123 VGSPGAYYALYGWAAGAGVDPSQVPGPDTEWQVIDGDILSVDAPVTLQWDNGAGLSFTRI 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLV 230 I +D++Y+F+I +V N S + +P G + RH +P N F + EG +A + D L Sbjct: 183 IEIDDNYMFQITQSVANTSDAPVTVAPYGILARHGEPDDLKNFFILHEGVVA-MADGELT 241 Query: 231 EQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 E + DI + + N W+G +D +W SV IP S KY Sbjct: 242 ETNWDDIPEFPVDQREGVPAERIENVLNGWIGFTDHFWMSVLIPDPSASARLTTKYRPRA 301 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 YQA+ T+ PG S++ T LFAGAKE+ TI +Y+ D + RF IDWGWF+F Sbjct: 302 DI-YQAETVLPAQTVAPGTSVSATTQLFAGAKEWETIRNYQTD-GVDRFIDSIDWGWFFF 359 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP+F L+ Y +GN G AI+ T+ +K + PLA K YVS A MK +QP++++L+E Sbjct: 360 LTKPIFFLLHYLNAFIGNMGWAIIGLTLIIKAILLPLAYKSYVSMAKMKELQPQMEKLKE 419 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + Q +Q+ M++LYK +NP AGC PILLQIP+FF++YKVI +++E+RHAPF+G Sbjct: 420 EAGDDR-QKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPFFGP 478 Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 +DL+A DPT+I L+G+LPF P + +GI P+++ +SM++Q K++P P D Sbjct: 479 FQDLSAPDPTSIMNLYGLLPFDGPEPGSIMALIFIGILPLLLGISMWLQQKLNPAPTDPT 538 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 Q MI WMP VF+F L F +GL++YW +N I+ VQQ +IM+ G + + ++ F Sbjct: 539 QQMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFVQQYMIMRSQGYKPDVFGNIKGGFQ 598 Query: 576 KN 577 K Sbjct: 599 KK 600 >gi|16125020|ref|NP_419584.1| putative inner membrane protein translocase component YidC [Caulobacter crescentus CB15] gi|221233743|ref|YP_002516179.1| inner membrane protein translocase component YidC [Caulobacter crescentus NA1000] gi|38503160|sp|Q9AA40|OXAA_CAUCR RecName: Full=Inner membrane protein oxaA gi|254772763|sp|B8H1E8|OXAA_CAUCN RecName: Full=Inner membrane protein oxaA gi|13422004|gb|AAK22752.1| 60 kd inner-membrane protein [Caulobacter crescentus CB15] gi|220962915|gb|ACL94271.1| inner membrane protein translocase component yidC [Caulobacter crescentus NA1000] Length = 615 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/612 (37%), Positives = 345/612 (56%), Gaps = 50/612 (8%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD-------NSYAA 55 +N F+ A +++I Y Q F + P+ ++ E + + +Q + N A Sbjct: 6 KNTLMFIVSAFAILIGY--QFFVLGPQQKKAEAEFRAKKAAEQQSAAKAGVTLDANGNPA 63 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 L R A ++SPR+E+ P+L GSI LKGA+ DDL LR Y +SP V L P Sbjct: 64 PLRLSRDAAKALSPRIEVDTPALSGSIALKGARIDDLFLRKYDETTKKDSPPVELFRPEG 123 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 ++A+FA+ + AN LP+S TVW G++L P +P+ L + N + F R I++D Sbjct: 124 AEHAWFADFGWAG-ANLPGLPDSRTVWTAAPGQVLRPNSPVTLTYDNGLGLTFTRVIAVD 182 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG----VQEGFIAVLG---DKS 228 + +F + D+V NN + ++ +P + R Q ++ G V EG I VLG ++ Sbjct: 183 DQAMFTVTDSVKNNGTNGLQLAPYATVQR---QGISDALGKNQIVHEGAIGVLGATDEQK 239 Query: 229 LVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQ 286 L KY +K + +F W GI+DKYW + IP + + +Q++ + G Y Sbjct: 240 LEMAKYGKWKKDKPLQSFDSVGGWTGITDKYWLAALIPGQNQAIKAQYRVTNVAGIDVYD 299 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE---------------KDLAIPRFE 331 F + PG +++ T LFAGAK P + YE IPRF+ Sbjct: 300 VNFLGPVQVLNPGATVSQTTRLFAGAKTVPLLRKYEYGATPAPAIWEFWNKTKAEIPRFD 359 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +DWG F F +P+F ++ FY LVGNFG+AI+L TV +KL+ +P+A K Y S A MK Sbjct: 360 DAVDWGMFRFFTRPIFNILEVFYKLVGNFGLAILLLTVVLKLVLYPMADKSYESMAKMKK 419 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++++L+ K K P + Q+ M+ LY+ INP+ GC P+L+QIPVF+A+YKV+++++ Sbjct: 420 IAPEVEKLKAKHKDDPAK-QQQEMMALYQKEKINPMMGCLPMLIQIPVFYALYKVLTVTI 478 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM--------HVGIWPIIMSLSMFI 503 EMRHAPF+GWI+DL+A DPT +F LFG++P + PG + H+G+WP++ +M++ Sbjct: 479 EMRHAPFFGWIQDLSAPDPTTMFNLFGLIP-WDPGSLPLIGAMIAHLGVWPLLYGFTMWL 537 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M+PP D Q I W PV+F F LS F GL+IYW WSNV++I QQ +IM+ + E Sbjct: 538 TTAMNPPAGDPIQQKIFQWFPVIFTFTLSGFAVGLVIYWCWSNVLTIFQQYIIMRRYKVE 597 Query: 564 ---IGLIDRLRS 572 +I RLR Sbjct: 598 NPIDQIIARLRG 609 >gi|262277963|ref|ZP_06055756.1| 60 kDa inner membrane insertion protein [alpha proteobacterium HIMB114] gi|262225066|gb|EEY75525.1| 60 kDa inner membrane insertion protein [alpha proteobacterium HIMB114] Length = 560 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 211/559 (37%), Positives = 333/559 (59%), Gaps = 10/559 (1%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD-- 60 N N A+ LS ++ WQ +Y P + N E+ Q +K S + ++ Sbjct: 2 ENKNVLAAVVLSTFVIMMWQFWYGEPVPQTQNQEQVQQQQLKGDKPSAPSISQKKVETKL 61 Query: 61 -RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 R+ A++ R++++N ++ GSI L GA DD+ L+ Y+ D + + V LL+P A Sbjct: 62 TRSDAINQGDRIKIENSAVEGSIALTGALIDDVTLKNYNQDNTGDQTKVILLNPKKYDQA 121 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 YF E + ++ N I +P++ T+W K LTP TP++L + N + F + ++D+ YL Sbjct: 122 YFLETGWATSGNEI-VPDNQTLWTAKGNKTLTPNTPVELEWNNGQGLTFIKKFTIDDQYL 180 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 I + + NNS + +I R + + F + EG + ++ D++L E+ Y DI + Sbjct: 181 ITINEEIKNNSNQTVNLFHYAQITRQEKPEIQDFFILHEGLLGIV-DETLTEEDYDDIVE 239 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 F+ S W+GI+DKYW + IP K +F ++F Y + Y + TI Sbjct: 240 KK-KTFNGSQGWVGITDKYWLTAIIPEKGKNFKAEFSYDKSFKSNY---IITDATTINVN 295 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 ++ + + LF GAKE I Y +F++ IDWGWF+F KP+F ++ Y + GN Sbjct: 296 QTGSNISNLFIGAKEVSVIDGYTASNGFHKFDLAIDWGWFHFFTKPLFFIIDYLFKWCGN 355 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 FGIAI+L T V+L+FFPLA + S A MK +QP++ L++ +K+ Q +Q M+ LY Sbjct: 356 FGIAIILLTAGVRLIFFPLANYSFASMAKMKALQPEMQRLKDLYKEDK-QKIQMEMMNLY 414 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NP++GC P++LQIP FFAIYK++ +++EMRHAPF+GWI+DL+AADPT+IF LFG+ Sbjct: 415 KREKVNPISGCLPVMLQIPFFFAIYKMLFVTIEMRHAPFYGWIQDLSAADPTSIFNLFGL 474 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 +P+ PGF+ +G WPIIM ++M+IQ K++P P D QA I + P L+SFP+GL+ Sbjct: 475 IPWDPPGFLIIGAWPIIMGVTMYIQQKLNPAPPDPIQAKIFMFFPFFLTILLASFPSGLV 534 Query: 540 IYWSWSNVISIVQQAVIMK 558 IYWS +NV+++ QQ VI++ Sbjct: 535 IYWSVNNVLTMAQQYVIIR 553 >gi|89053128|ref|YP_508579.1| putative inner membrane protein translocase component YidC [Jannaschia sp. CCS1] gi|122499543|sp|Q28UQ8|OXAA_JANSC RecName: Full=Inner membrane protein oxaA gi|88862677|gb|ABD53554.1| protein translocase subunit yidC [Jannaschia sp. CCS1] Length = 626 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/627 (36%), Positives = 353/627 (56%), Gaps = 51/627 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN------ERKNIQT-----VKQPNQVD 50 ++N N +A LS +++ W + P + E N E ++T + P V Sbjct: 3 DQNRNLILATGLSFVVILVWFLLFPPPEMVEDPNAIPPAAETGGVETDTGIALTPPVTVA 62 Query: 51 NSYAAVLIDDRAQ-ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 ++ A ++ ALS + R+++ P++ GSI+L G + DDL+LR Y +V + IV Sbjct: 63 DAPAGADTTAPSEVALSEAARIDIDTPAVEGSISLLGGRIDDLSLRNYFTEVDGDQ-IVR 121 Query: 110 LLSPSNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 LLSP + + Y+A + + + ++P S+T W L SG ILTP +PI L + N + ++ Sbjct: 122 LLSPVGSDDPYYALYGWTPSGDLGYADVPTSDTPWELESGTILTPDSPITLAWDNGSGLI 181 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGD 226 F RTI +D+ ++F++ +V N ++ +P G + RH P N F + EG + + D Sbjct: 182 FRRTIEIDDRFMFQVTQSVENTGGAEVNLAPYGIVARHGLPSDLQNFFILHEGVVRKV-D 240 Query: 227 KSLVEQKYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 L E YSD+ I E+N W+G +DKYW + IP + SF S KY Sbjct: 241 GELSELGYSDLPDLDIIAREGVPAEVMEVETNGWIGFTDKYWMTTLIPGENQSFVSVVKY 300 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE--------------K 323 + YQ + ++I PG++ T LFAGAKE I YE + Sbjct: 301 VPSAEI-YQTEARLPYMSIAPGETAEVTTQLFAGAKEAEAIRDYENAEPGLIASLFGAEQ 359 Query: 324 DLA---IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 D + IPRF IDWGWFYF+ KP+F L+ + +GN G+AI+ T+ VK + FPLA Sbjct: 360 DASRGEIPRFIDSIDWGWFYFLTKPLFWLLHWLNGAIGNMGLAIISLTLIVKAVLFPLAY 419 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 + YVS A MK +QP+I++L+E Q LQ+ M++LYK + +NP GC PILLQIP+F Sbjct: 420 RSYVSMAKMKELQPEIEKLKESAGDDR-QKLQQGMMELYKKNKVNPAGGCLPILLQIPIF 478 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWP 494 F++YKVI ++LE+RHAPF+GW+ DL+A D ++I L+G+LP P + +GI P Sbjct: 479 FSLYKVIFVTLELRHAPFFGWLNDLSAPDSSSIINLYGLLPNPAPEPESIMALIFIGILP 538 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 +++ +SM++Q K++P P D QA I W+P VF+F L SF +GL++YW +N ++ QQ Sbjct: 539 LLLGISMWLQQKLNPAPTDAMQAQIFAWLPWVFMFMLGSFASGLLVYWIANNTLTFTQQY 598 Query: 555 VIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +IM+ G + + +RS+F K + Sbjct: 599 LIMRSQGFKPDVFGNIRSSFKKKAKEE 625 >gi|260432492|ref|ZP_05786463.1| inner membrane protein OxaA [Silicibacter lacuscaerulensis ITI-1157] gi|260416320|gb|EEX09579.1| inner membrane protein OxaA [Silicibacter lacuscaerulensis ITI-1157] Length = 609 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 220/604 (36%), Positives = 347/604 (57%), Gaps = 31/604 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD- 60 ++N N +A ALS +++ W + P + ++ T Q N+ ++ D Sbjct: 3 DQNKNLILATALSFLVILVWFVLFPPPEPTTLQDQTAISATEGDEIQTPNAAEPSVVGDA 62 Query: 61 -----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 AQ +S PRVE+ P L GS++L G + D+L L+ Y + + ++PIV LLSP Sbjct: 63 ATEATEAQPVSDVPRVEIDTPRLTGSLSLSGGRVDELYLKDYKVSLEDDAPIVELLSPVG 122 Query: 116 TKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + +AY+A + A + ++P NT+WN+ SG+ L +P+ L + N N + F RTI+ Sbjct: 123 SDSAYYALYGWAPGAGLSGADVPGPNTLWNIESGETLGVDSPVTLKWDNGNGLTFRRTIA 182 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI---AVLG--DKS 228 +DE Y+F + +V N + +I +P G + RH + G++ FI V+G D + Sbjct: 183 VDEDYMFTVTQSVENATQAEIGMAPYGILARHGMGEDGDLPGLKNFFILHEGVIGMADGT 242 Query: 229 LVEQKYSDI--------EKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 L E KY D+ E++ + + N W+G +D YW + IP + F + KY S Sbjct: 243 LTEVKYDDVRDFDIDPNERAQAEVYQVKENGWIGFTDHYWMTTLIPEPGSPFKAAAKYDS 302 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 YQ + +T+ PG++ LFAGAKE+ TI Y+ + +F IDWGWF Sbjct: 303 R-RKIYQTETVLPTLTVAPGETAQVKTRLFAGAKEWETIREYQAQ-GVQKFIDSIDWGWF 360 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +F+ KP+F L+ L+GN G +I+ T+ +K + FPLA K YVS A MK +QP+++ L Sbjct: 361 FFLTKPIFWLLHNINALIGNMGWSIIGLTLIIKAILFPLAFKSYVSMAKMKELQPQMEAL 420 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E Q +Q+ M++LYK +NP AGC PILLQIP+FF++YKVI +++E+RHAP++ Sbjct: 421 KEAAGDDR-QKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPWF 479 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 G +DL+A DPT+I LFG+LP+ P + +GI P+++ +SM++Q K++P P D Sbjct: 480 GPFRDLSAPDPTSIMNLFGLLPWAGPEPGTLMATIFIGILPLLLGISMWLQQKLNPAPTD 539 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 QAMI WMP VF+F L SF +GL+IYW +N I+ QQ +IM+ G + + + S+ Sbjct: 540 PTQAMIFAWMPWVFMFMLGSFASGLVIYWIANNTITFTQQYLIMRSQGYKPDVFGNIMSS 599 Query: 574 FSKN 577 F + Sbjct: 600 FKRT 603 >gi|148284763|ref|YP_001248853.1| putative inner membrane protein translocase component YidC [Orientia tsutsugamushi str. Boryong] gi|146740202|emb|CAM80485.1| 60 kD inner-membrane protein, preprotein translocase subunit [Orientia tsutsugamushi str. Boryong] Length = 567 Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust. Identities = 219/562 (38%), Positives = 340/562 (60%), Gaps = 11/562 (1%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNN-ERKNIQTVKQP--NQVDNSYAAVLIDDRA 62 N +AI LS+ I+ W FY PR+ +M+N +++ I+ K+ NQ +A+ I D+ Sbjct: 8 NLILAITLSLAIILGWHFFYEKPRLIKMSNAQKEKIEYNKRSSTNQYLLHESALKIKDKV 67 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 + S RV++ L GSI+LKG +FDDL L GY DV NSP V LLSPS T AYFA Sbjct: 68 DIIDYSTRVKIMTNKLHGSISLKGLRFDDLILVGYKQDVLENSPDVELLSPSETATAYFA 127 Query: 123 ELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 E+ + N + + PNS+T+W IL + N +N+ F ++S+D++Y+F Sbjct: 128 EVGWYCAKNADSDFPNSDTLWQ-TDKSILQANDTTTFTWTNKHNVQFIVSVSIDDNYMFT 186 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI-EKS 240 I ++ NNS Q+ G I R+ + N+ + +G IA + D L E Y+ + EK Sbjct: 187 INQSIVNNSKQQLAVQFHGLIHRNLAENE-NSANIFQGPIASI-DSYLNEVTYNKLKEKK 244 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF-SANEITILPG 299 I WLGISDKYW + FIP + + + F Y G +YQ F S E+ G Sbjct: 245 HIDYNLNVVHWLGISDKYWLTSFIPDVKYRYSTSFMYGKAGFEKYQVSFLSPKEVVNSDG 304 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 S++ + LF GAKE + +Y + I F+ ID+GWFY + KP+F +S+FY GN Sbjct: 305 GSLSVVHHLFLGAKEVKLLDYYAEKYNIKLFDRAIDFGWFYILTKPLFYTLSFFYKYCGN 364 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 FG++I++ T+ +K++ F + + Y S M+++QP+I L+E + ++ Q+ M LY Sbjct: 365 FGVSILIVTILIKIMMFSFSNRSYSSMKKMRDLQPRIQRLQELYGDDKIKLHQEIM-ALY 423 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K ++ L+Q+P+FF++YKV+ +++EMRHAPF WIKDL+A DPT IF LFG+ Sbjct: 424 KKEKVSLAGSFLQSLIQLPIFFSLYKVLHVTIEMRHAPFLSWIKDLSALDPTCIFNLFGL 483 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538 LPF++PGF+++G P++ S +M +Q K++P P AD QA +L +MP++ + ++FPAGL Sbjct: 484 LPFHVPGFLNIGALPVLTSATMILQQKINPAPTADPAQAQVLKFMPLILLIVFNNFPAGL 543 Query: 539 IIYWSWSNVISIVQQAVIMKMH 560 +IYW+W+N++SIVQQ +I K++ Sbjct: 544 LIYWTWNNILSIVQQFIINKIN 565 >gi|254464722|ref|ZP_05078133.1| 60 kDa inner membrane insertion protein [Rhodobacterales bacterium Y4I] gi|206685630|gb|EDZ46112.1| 60 kDa inner membrane insertion protein [Rhodobacterales bacterium Y4I] Length = 600 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 213/531 (40%), Positives = 314/531 (59%), Gaps = 24/531 (4%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 R+ + P + GSI+L+G + DDL+L+ Y + +NSPIV LL P AY+A + Sbjct: 74 RLAIDTPRVTGSISLQGGRIDDLSLKDYRETLDANSPIVKLLKPVGEAQAYYALYGWAPG 133 Query: 130 ANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVT 187 A ++P +NTVW+ + LTP +P+ L + N + F RTIS+DE Y+F I +V Sbjct: 134 AGLSLDDVPGANTVWSAGADATLTPDSPVTLTWDNGKGLTFSRTISVDEDYMFSITQSVA 193 Query: 188 NNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI--------- 237 N S + +P G + RH +P N F + EG + + D L E Y D+ Sbjct: 194 NASGGTVSLAPYGTLARHSQPADLKNFFILHEGLVG-MSDGELAEIDYDDMADFEADARD 252 Query: 238 -EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 K+ + E N W+G +D YW S +P+ +F S K+ + YQ +T+ Sbjct: 253 GSKAEVRQVAE-NGWIGFTDHYWMSTLVPAPGQAFRSIAKF-DERRDIYQTDIVLPTVTV 310 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G+S T LFAGAKE+ TI Y+K I F +IDWGWF+F+ KPMF L+ L Sbjct: 311 ADGQSSEVTTQLFAGAKEWETIRGYQK-AGIQGFLDVIDWGWFFFLTKPMFWLLHNLNVL 369 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GN G AI+ TV +K+L FPLA K Y S A MK +QP++++L+E+ Q +QK M+ Sbjct: 370 IGNMGWAIIGLTVVIKILVFPLAYKSYASMAKMKELQPEMEKLKERAGDDR-QKMQKEMM 428 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G +DL+A DPT+IF L Sbjct: 429 ELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQDLSAPDPTSIFNL 488 Query: 477 FGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 FG+LP+ P + +GI PI++ +SM++Q K++P P D Q MI WMP VF+F Sbjct: 489 FGLLPWAAPAPESILALVFIGILPILLGVSMWLQQKLNPAPTDPTQQMIFAWMPWVFMFM 548 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 L F +GL++YW +N I+ QQ +IM+ HG + ++S+F K ++ Sbjct: 549 LGGFASGLVVYWIANNTITFTQQYLIMRSHGYSPDVFGNIKSSFKKKPKAE 599 >gi|84499797|ref|ZP_00998085.1| putative inner membrane protein translocase component YidC [Oceanicola batsensis HTCC2597] gi|84392941|gb|EAQ05152.1| putative inner membrane protein translocase component YidC [Oceanicola batsensis HTCC2597] Length = 608 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 211/611 (34%), Positives = 342/611 (55%), Gaps = 38/611 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 ++N N +A LS I++ W F ++P E +++ +Q D + D Sbjct: 3 DQNKNLILATVLSFIVIVVW--FLLFPPPERVDDPNAPATGETAQSQADGTAPMTPGADT 60 Query: 62 AQALSM-------------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 + S+ +PR+ + P L GSINL+G + DDL L+ Y + +++ V Sbjct: 61 REGASVPSDAAPASADTEEAPRLGIDTPRLAGSINLRGGRIDDLKLKDYLTSLDADATRV 120 Query: 109 TLLSPSNTKNAYFAELDY--VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 T+L P + ++ ++A + VS A+ +P +TVW++ LTP TP+ + ++N + Sbjct: 121 TVLRPEDQRDPFYALYGWIPVSGADAGAMPAEDTVWSVEGTPTLTPETPVTMTWENDAGL 180 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLG 225 +F RT+ +D Y+F + TV N + + P + RH P F + EG I + Sbjct: 181 IFRRTVGIDTDYMFTVRQTVENTGENPVALRPYSVLRRHGIPSDLKKFFVLHEGLIR-MS 239 Query: 226 DKSLVEQKYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFK 276 D L E+ Y ++E + + + W G +D YW S IP +T+F S K Sbjct: 240 DGELQEESYGNLEDFDVDGREGVPAERIEVQESGWTGFTDHYWMSTIIP--DTAFRSTAK 297 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 Y G + +Q + I PG S + LFAGAKE+ TI Y+ D + RF IDW Sbjct: 298 YFP-GRSIFQTDAVLPAVEIAPGASASVDTRLFAGAKEWETIKEYQNDHGVTRFLDAIDW 356 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GWF+F+ KP+F ++ + + +GN G +I+ TV +K++ FPLA K Y S A M+ +QP++ Sbjct: 357 GWFFFLTKPIFAVLHWLNSHIGNMGWSIIALTVLLKMVLFPLAYKSYASMAKMRELQPEM 416 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++++E+ Q LQK M++LYK +NP +GC PILLQIP+FF++YKVI ++LE+RHA Sbjct: 417 EKIKERAGDD-RQKLQKEMMELYKKEKVNPASGCLPILLQIPIFFSLYKVIFVTLELRHA 475 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPP 510 P+ GWI DL+A DP++I LFG+LP P + +G+ PI++ +SM++Q K++P Sbjct: 476 PWIGWIHDLSAPDPSSILNLFGLLPIATPDPDSFLAIISLGVLPILLGVSMWLQQKLNPA 535 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D Q MI WMP VF+F L +F +GL++YW +NVI+ +QQ IM+ HG + + + Sbjct: 536 PTDPTQQMIFAWMPWVFMFMLGTFASGLVLYWITNNVITFMQQYAIMRSHGFKPDVFGNI 595 Query: 571 RSTFSKNYNSQ 581 R + ++ ++ Sbjct: 596 RKSLTRKKKAE 606 >gi|126724910|ref|ZP_01740753.1| putative inner membrane protein translocase component YidC [Rhodobacterales bacterium HTCC2150] gi|126706074|gb|EBA05164.1| putative inner membrane protein translocase component YidC [Rhodobacterales bacterium HTCC2150] Length = 620 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 221/602 (36%), Positives = 340/602 (56%), Gaps = 30/602 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD- 60 + N N +A+ALSV+++ AW F+ P E Q+ D + + Sbjct: 3 DENKNLLLAMALSVMVIIAWSIFFPAPVDETPVAATSGEQSTTAGVSADAGSDVAAVSNV 62 Query: 61 ------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 R ALS + R ++ P L GSI+ G + DDL+L+ Y +++ S IVTLL+P Sbjct: 63 PTSAEVRTAALSSATRADIDTPRLSGSISTLGGRIDDLSLKDYRIELDEASDIVTLLTPE 122 Query: 115 NTKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 T++AY+A + + ++P T W + + LTP TP+ LV++N + F + I Sbjct: 123 GTQDAYYALYGWAPGGDLGWDDVPGPETQWAIEGNEKLTPETPVTLVWENTTGMTFRQII 182 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVE 231 S+D +LF + V+NN R +P +I RH +P F + EG I G+ S E Sbjct: 183 SVDADFLFSVQQEVSNNGSTAARLAPYSQIRRHGEPTDMKGFFILHEGAIRQSGE-SQKE 241 Query: 232 QKYSDI----------EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 YSD+ ++S + + SN WLG +D YW + IP F S +Y + Sbjct: 242 YDYSDLADFDRDDQWGDRSDVVDVA-SNGWLGFTDHYWMTALIPESAQPFKSVLQYKAQQ 300 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 Y ++ +T+ G++ T T FAGAKE+ I YE + I RF IDWGWFYF Sbjct: 301 DV-YLSETRLPTLTVEAGQTNTVTTHFFAGAKEWAVIREYEANNGIYRFIDSIDWGWFYF 359 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP+F ++ ++GN G +I+ T+ +K L FPLA K YVS A MK +QP++ E++E Sbjct: 360 LTKPIFWVLHSLNGIIGNMGWSIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMAEIKE 419 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K +V QK +++LYK +NP +GC PILLQIP+FF++YKVI +++++RHAP+ GW Sbjct: 420 KAGDDKSKV-QKEIMELYKKEKVNPASGCLPILLQIPIFFSLYKVIFVTIDLRHAPWVGW 478 Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 IKDL+A D +++F LFGILP+ P + +G+ P+++ +SM++Q K++P P D Sbjct: 479 IKDLSAPDTSSLFNLFGILPWDSPEPGSIMALIFIGVLPLLLGISMWLQQKLNPAPTDAT 538 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 QAMI WMP VF+F L SF +GL++YW +N I+ QQ +IM+ G + + + S+F Sbjct: 539 QAMIFAWMPWVFMFMLGSFASGLVVYWIANNTITFTQQYLIMRSQGFKPDVFGNIMSSFK 598 Query: 576 KN 577 K Sbjct: 599 KK 600 >gi|99080148|ref|YP_612302.1| putative inner membrane protein translocase component YidC [Ruegeria sp. TM1040] gi|122398415|sp|Q1GJX6|OXAA_SILST RecName: Full=Inner membrane protein oxaA gi|99036428|gb|ABF63040.1| protein translocase subunit yidC [Ruegeria sp. TM1040] Length = 608 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 210/525 (40%), Positives = 313/525 (59%), Gaps = 24/525 (4%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 PR+ + P + GSI+LKG + DDL L+ Y + +SPIVTLLSP+ +AY+A + Sbjct: 78 PRLTIDTPRVEGSISLKGGRIDDLRLKDYRETLDDDSPIVTLLSPAGQPHAYYALYGWAP 137 Query: 129 TAN-NIE-LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTV 186 A IE +P +NT+W +G LTP TP+ L + N + F R +S+DE Y+F I +V Sbjct: 138 GAGLGIEDVPTANTLWQAEAGATLTPDTPVTLTWDNGKGLTFSREVSIDEDYMFSITQSV 197 Query: 187 TNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI-------- 237 TN+S + +P G + RH +P N F + EG + + D L E Y D+ Sbjct: 198 TNSSGASVALAPYGTLARHGEPANLENFFVLHEGVVG-MADGELSEIDYDDMTDFDPDPR 256 Query: 238 --EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 ++ ++ E N W+G + YW S IP+ +F + KY + YQ +T Sbjct: 257 DGSRAQVNTVTE-NGWIGFTGHYWMSTLIPAPGEAFRAIAKY-DERRDIYQTDVVLPTVT 314 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G+S + LFAGAKE+ TI YE+ I F IDWGWF+F KP+F ++ + Sbjct: 315 LAAGESTSANTQLFAGAKEWATIREYER-AGIEGFLDSIDWGWFFFFTKPIFAVLHWLNA 373 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +GN G+AI+ T +K+L FPLA K Y S A MK +QP++++LRE+ Q +QK M Sbjct: 374 AIGNMGVAIIALTFLLKILVFPLAYKSYASMARMKELQPEMEKLRERAGDDR-QKMQKEM 432 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHA F+G +DL+ DPT++F Sbjct: 433 MELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAAFFGPFQDLSVPDPTSLFN 492 Query: 476 LFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 LFG+LP+ P + +GI PI++ +SM++Q K++P P D+ Q MI WMP VF+F Sbjct: 493 LFGLLPWAAPAPDSLLSLVFIGILPILLGVSMWVQQKLNPAPTDETQRMIFAWMPWVFMF 552 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 L F +GL++YW +NVI+ QQ +IM+ HG + ++S F Sbjct: 553 MLGGFASGLVVYWITNNVITFTQQYLIMRSHGYTPDVFGNIKSGF 597 >gi|307294062|ref|ZP_07573906.1| membrane protein insertase, YidC/Oxa1 family [Sphingobium chlorophenolicum L-1] gi|306880213|gb|EFN11430.1| membrane protein insertase, YidC/Oxa1 family [Sphingobium chlorophenolicum L-1] Length = 567 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 206/565 (36%), Positives = 323/565 (57%), Gaps = 12/565 (2%) Query: 1 MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N +A+ L+ I++ W +F+ E + + A Sbjct: 1 MDDKKNIILAVVLTAAILFGWPYVANHFFPAANPPATKIEGGKTTPLTPSGSAPAAEGAA 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + D A L PR+ ++ P + GSINLKGA+ DD+ L Y ++ +S + L SPS T Sbjct: 61 AVRDLALVLKDGPRIPIRTPKITGSINLKGARIDDIVLPTYKESIARDSHAIRLYSPSGT 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 K+AYFA + ++ P+ N+VW SGK LTP +P+ L + N FE S+DE Sbjct: 121 KDAYFAGFGW--QGEGLKTPDGNSVWT-ASGKELTPASPVTLTWNNGAGQSFEIRYSIDE 177 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 +Y+ V+N+ + G + R P T +T+ + G + V + + Y D Sbjct: 178 NYMITAQQKVSNSGAGTVAVKSYGYVSRAHPSTDPDTWTIHVGPMGVFNGAANYDVNYKD 237 Query: 237 IEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +EK S +F + W+G +DKYW S +P ++ +F +Q + ++Q S + Sbjct: 238 LEKGPASQSFQSTGGWIGFTDKYWLSALVPDQKAAFSAQMR--KGAGTQFQTDISLAPVM 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + GKS+T TN LF GAKE T+ Y+ D IP F+ IDWGWFY+ KP+F L+ + + Sbjct: 296 LAAGKSVTQTNRLFVGAKEVKTLEAYQ-DAGIPLFDRAIDWGWFYWFEKPIFALLHWLFE 354 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +GNFG+AI+ T V+ L FP+A++Q+ S A M+ +QPK+ L+EK+K P+ LQ+ M Sbjct: 355 HIGNFGVAIICLTFVVRGLMFPVAQRQFASMAAMRAVQPKMKALQEKYKDDKPK-LQQEM 413 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NPLAGC PI +QIP+FFA+YKV+ +++EMRH PF WIKDL+A DP +I Sbjct: 414 MELYKREKVNPLAGCLPIFIQIPIFFALYKVLQLTIEMRHQPFVLWIKDLSAPDPLHILN 473 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+LPF P F+ +G+ +++ +SM+ Q K++P D Q + MP + +F ++ F Sbjct: 474 LFGLLPFTPPAFLGIGVLALLLGISMYFQFKLNPAQMDPMQQQVFAIMPWMMMFIMAPFA 533 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 AGL++YW +N +S++QQ + K H Sbjct: 534 AGLLVYWITNNCLSMLQQWWLYKRH 558 >gi|163733766|ref|ZP_02141208.1| putative inner membrane protein translocase component YidC [Roseobacter litoralis Och 149] gi|161392877|gb|EDQ17204.1| putative inner membrane protein translocase component YidC [Roseobacter litoralis Och 149] Length = 606 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 222/602 (36%), Positives = 342/602 (56%), Gaps = 30/602 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----EMNNE-RKNIQTVKQPNQVDNSYAA 55 ++N N +A ALS +++ W + P E E + E + T P+ ++ + Sbjct: 3 DQNKNLILATALSFVVILVWFVLFPPPEPEIPLTSETSTELTPDAATGSLPSVTSDTAPS 62 Query: 56 VLIDD--RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 V+I+ R+ AL +PRVE+ L GSI+L G + DDL+L+ Y ++ IVT+LSP Sbjct: 63 VVIEGETRSAALEEAPRVEIATDRLKGSISLLGGRIDDLSLKDYRETQEDDADIVTMLSP 122 Query: 114 SNTKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + AY+A + + A + ++P +T W +I G IL+ PI L + N + F R Sbjct: 123 VGSPGAYYALYGWAAGAGVDPSQVPGPDTEWQVIDGDILSVDAPITLQWNNGAGLSFTRI 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLV 230 I +D++Y+F+I +V N S + +P G + RH +P N F + EG +A + D L Sbjct: 183 IEIDDNYMFEITQSVANTSDAPVTVAPYGILARHGEPADLKNFFILHEGVVA-MADGELT 241 Query: 231 EQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 E + DI + + N W+G +D +W SV IP S KY Sbjct: 242 ETNWDDIPEFPVDQREGVPAERIENVLNGWIGFTDHFWMSVLIPDPSASARLTTKYRPRA 301 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 YQA+ T+ PG S++ T LFAGAKE+ TI +Y+ D + RF IDWGWF+F Sbjct: 302 DI-YQAETVLPAQTVAPGTSVSATTQLFAGAKEWETIRNYQTD-GVDRFIDSIDWGWFFF 359 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP+F L+ Y +GN G AI+ T+ +K + PLA K YVS A MK +QP++++L+E Sbjct: 360 LTKPIFFLLHYLNAFIGNMGWAIIGLTLIIKAILLPLAYKSYVSMAKMKELQPQMEKLKE 419 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + Q +Q+ M++LYK +NP AGC PILLQIP+FF++YKVI +++E+RHAPF+G Sbjct: 420 EAGDDR-QKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPFFGP 478 Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 +DL+A DPT+I +G+LPF P + +GI P+++ +SM++Q K++P P D Sbjct: 479 FQDLSAPDPTSIMNFYGLLPFDGPEPGSIMALIFIGILPLLLGISMWMQQKLNPAPTDPT 538 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 Q MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + + ++ F Sbjct: 539 QQMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFAQQYMIMRSQGYKPDVFGNIKGGFQ 598 Query: 576 KN 577 K Sbjct: 599 KK 600 >gi|254477563|ref|ZP_05090949.1| 60 kDa inner membrane insertion protein [Ruegeria sp. R11] gi|214031806|gb|EEB72641.1| 60 kDa inner membrane insertion protein [Ruegeria sp. R11] Length = 604 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/606 (37%), Positives = 349/606 (57%), Gaps = 31/606 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRI-----EEMNNERKNIQTVKQPNQVDNSYAAV 56 ++N N +A ALS +++ W F+ P E+ V P+ Sbjct: 3 DQNKNLLLATALSFLVILGWYIFFPPPEPAPQPDAEIAQTAPAGDGVSAPSAAQAIAGDA 62 Query: 57 LIDDRAQALSMS--PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 A+A + + PRV + + G+I+L+G + DDL L+ Y + + +SPIV +LSP+ Sbjct: 63 AAAGAAEAETAADAPRVAIDTARVTGTISLQGGRLDDLALKDYRVSLEPDSPIVKMLSPA 122 Query: 115 NTKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 + NAY+A + A ++P +NT+W+L G+ LTP TP+ L ++N + F RTI Sbjct: 123 GSPNAYYALYGWAPGAGLGIDDVPGANTLWSLHEGETLTPETPVTLSWRNGKGLTFFRTI 182 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVE 231 S+DE+Y+F++V +V N + +P G I RH PQ N F + EG + + D +L E Sbjct: 183 SIDENYMFQVVQSVMNEGAGTVSLAPYGTIARHGMPQDLKNFFILHEGVVG-MADGTLAE 241 Query: 232 QKYSDIE----------KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 Y D+ +S I+ E N W+G +D YW S +P SF S K+ + Sbjct: 242 IDYDDMADFDLDARSGARSEITQV-EGNGWIGFTDHYWMSTLVPEPGQSFRSIAKF-DER 299 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 YQ +T+ G+ T LFAGAKE+ TI Y+KD I F IDWGWF+F Sbjct: 300 REIYQTDVVLPTVTLANGEGTEVTTELFAGAKEWATIRGYQKD-GIEGFLDSIDWGWFFF 358 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP+F ++ + L+GN G AI+ TV +K+L FPLA K Y S A MK +QP++++++E Sbjct: 359 LTKPIFAVLHWLNALIGNMGWAIIGLTVLIKILVFPLAYKSYASMAKMKELQPEMEKIKE 418 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K Q LQ+ M+ LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G Sbjct: 419 KAGDDR-QKLQQEMMALYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGP 477 Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 +DL+A DPT+I LFG+LPF P + +GI P+++ +SM++Q K++P P D Sbjct: 478 FQDLSAPDPTSIMNLFGLLPFTGPEPGSILATVLIGILPLLLGISMWLQQKLNPAPTDPT 537 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 Q MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG + + ++S+F Sbjct: 538 QQMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSSFK 597 Query: 576 KNYNSQ 581 K+ ++ Sbjct: 598 KSPKAE 603 >gi|297182643|gb|ADI18801.1| preprotein translocase subunit yidc [uncultured SAR11 cluster bacterium HF4000_37C10] Length = 560 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 216/560 (38%), Positives = 329/560 (58%), Gaps = 19/560 (3%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD---RA 62 N +AI LS +++ W F+ P +E E Q K S V + R Sbjct: 5 NVLMAIVLSTLVLVFWATFFEPPPVERQIAED---QVTKSEELSSPSIEKVELSKKIARD 61 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 + RV+++N ++ GSI+L+GA DD+ + Y + S+ ++ L+P ++ Y+ Sbjct: 62 DTIDSVARVKIENNNIKGSISLQGAIIDDIIFKNYKESLESDQKVI-FLNPKSSDEGYYI 120 Query: 123 ELDYVSTANN-IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 E + S +N ++LP NT+W + K+LTP PI L + N ++F + I LD+ YLFK Sbjct: 121 ETGWASNSNEKLKLPLDNTIWKVKGNKVLTPNKPIVLEWDNNEGLIFTKKIELDDKYLFK 180 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 I + N S F P +I R+ + + EGFI + D E K D E Sbjct: 181 ISQGIKNTSNKSYEFFPYAQITRNYKPDVIPIYILHEGFIGMFDD----ELKEEDYEDVE 236 Query: 242 ISNF--HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 F + S WLGI+DKYW + +P K F S+F + DG +Y+A F E T+L Sbjct: 237 DEKFIINSSKGWLGITDKYWLTAIVPEKGKKFKSEFLSI-DG--KYKANFIIKEATVLSS 293 Query: 300 K-SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 SIT F AKE I Y + L I +F++ IDWGWFYFI KP+F ++ YF+ L G Sbjct: 294 NASITNEINAFVMAKEVAVIDDYAEKLGIEKFDLTIDWGWFYFITKPLFFVIEYFFKLTG 353 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 NFG+AI++ T V+++FFPLA + S A MK +QP++ L+E K + LQ+ M+ L Sbjct: 354 NFGVAIIILTALVRIVFFPLANYSFRSMAKMKILQPEMIRLKELHKDDKTK-LQQEMMAL 412 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP++GC P+L+QIP FFA+YK++ +++EMR PF+GWI+DL+A DPT+IF LFG Sbjct: 413 YKREKVNPVSGCLPVLIQIPFFFAVYKMLYVTIEMRQQPFFGWIQDLSARDPTSIFNLFG 472 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 ++P+ P F+ +G+WPI+M L+MF+Q K++P P D QA I ++P+ L+ FP+GL Sbjct: 473 LIPWDPPTFLMIGVWPILMGLTMFLQQKLNPTPPDPMQAKIFMFLPIFLTIILAPFPSGL 532 Query: 539 IIYWSWSNVISIVQQAVIMK 558 ++YW+ SNV+++ QQ VI++ Sbjct: 533 VVYWTVSNVLTMAQQWVIIR 552 >gi|126734531|ref|ZP_01750277.1| inner membrane protein oxaA, putative [Roseobacter sp. CCS2] gi|126715086|gb|EBA11951.1| inner membrane protein oxaA, putative [Roseobacter sp. CCS2] Length = 607 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 217/597 (36%), Positives = 337/597 (56%), Gaps = 25/597 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN--QVDN-SYAAVLI 58 ++N N +A LS ++ AW + P ++ + QT+ P D + AA Sbjct: 3 DQNKNLILATVLSFAVIVAWTTLFP-PEDLPVDPATETAQTLDDPTLPAADPVNPAATTP 61 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + +PRV ++ GSI+L+G + DDL L Y + ++ +V LL P Sbjct: 62 TEAPEPAADAPRVAIETGEFSGSISLQGGRIDDLALTNYRETIDEDAEVVRLLKPVGEPG 121 Query: 119 AYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 AYFA + +T + +P +T+W L SG LTP +P+ L + N +F I++D+ Sbjct: 122 AYFASFGWTATDGIDASAVPGPDTIWALESGDTLTPNSPVTLSWDNGAGQIFRTEIAVDD 181 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++F +V N + I P G + RH +P N F + EG + + D L E Y Sbjct: 182 AFMFTFAQSVENATSTAISARPYGLLRRHGEPDDLKNFFILHEGMVR-MTDGELEETGYD 240 Query: 236 DI--------EKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 DI E++ S S W+G +D YW + IP + F S KY D YQ Sbjct: 241 DITEYAVDPRERTQAERLDVSESGWIGYTDHYWMTTLIPEQGVPFRSTSKYF-DVRDLYQ 299 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 A+ T+ G++ T T LFAGAKE+ I +YE + + F IDWGWF+F+ KP+ Sbjct: 300 AEAVMPIETVAAGETATVTTRLFAGAKEWEAIRNYENEGGVGGFLDSIDWGWFFFLTKPI 359 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ Y +GN G +I+ TV +K++ PLA K YVS A MK +QP++++L+E+ Sbjct: 360 FALLHYLNIFIGNMGWSILALTVILKIIVLPLAYKSYVSMAKMKELQPEMEKLKERTGDD 419 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q +Q+ M++LYK + +NP AGC PILLQIP+FF++YKVI +++E+RHAP+ GWI+DL+ Sbjct: 420 -KQAMQQGMMKLYKDNKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPWIGWIRDLS 478 Query: 467 AADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 A DP++ LFG+LP+ P + +GI PI++ +SM++Q K++P P D Q MI Sbjct: 479 APDPSSFINLFGLLPYAAPEPGSILALIFIGILPILLGVSMWLQQKLNPAPTDPTQQMIF 538 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 WMP VF+F L SF +GL++YW +NVI+ +QQ IM+ HGA+ + ++++ K Sbjct: 539 AWMPWVFMFMLGSFASGLVLYWIANNVITFIQQYAIMRSHGAKPDVFGNIKASLKKR 595 >gi|85705859|ref|ZP_01036955.1| putative inner membrane protein translocase component YidC [Roseovarius sp. 217] gi|85669447|gb|EAQ24312.1| putative inner membrane protein translocase component YidC [Roseovarius sp. 217] Length = 611 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 219/600 (36%), Positives = 340/600 (56%), Gaps = 30/600 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER-----KNIQTVKQPNQVDNSYAAV 56 ++N N A ALS +++ W F ++P E + Q+V P + A Sbjct: 3 DQNKNLIFATALSFLVILVW--FVMFPPPESPAVDPNAPVPSATQSVPAPVADSTADATT 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 +PR+ + PSL G+I+L+G + DDL L+ Y + S IV LL+P + Sbjct: 61 TQTAAPATEPDAPRLNIDTPSLQGTISLQGGRIDDLFLKNYRETIDPASDIVRLLAPVGS 120 Query: 117 KNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 + Y+A + A ++P SNT+W + SG+ LTPT+PI L + N ++F R +S+ Sbjct: 121 EAPYYALYGWAPGAGLTADQVPGSNTLWQIESGETLTPTSPITLSWDNGAGLIFRRELSV 180 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQK 233 DE ++F + +V N + +P G + RH +P F + EG I + D +L E K Sbjct: 181 DEDFMFSVRQSVENTGASAVSLAPYGILARHGRPADLKKFFILHEGLIG-MADGTLSEIK 239 Query: 234 YSDIEK----------SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 Y D+E+ + ++ E N W+G +D YW + IP+ F S K+ Sbjct: 240 YDDVEEYPFNAREGAPAEVTQVTE-NGWIGFTDHYWMTTLIPASGNPFKSVSKF-DPQRG 297 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 +Q + T+ PG++ + LFAGAKE+ TI Y+ + + RF IDWGWF+F+ Sbjct: 298 IFQTETVQPTQTVEPGQTASADTRLFAGAKEWATIRAYQNEQGVDRFLDSIDWGWFFFLT 357 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F + + + ++GN G AI+ T+ +K L PLA K YVS A MK +QP++++++E Sbjct: 358 KPIFAALHWLHAIIGNMGWAIIALTLLIKALVLPLAYKSYVSMAKMKELQPQMEKIKETA 417 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q LQK M++LYK +NP AGC PILLQIP+FF++YKVI ++LE+RHAP+ WIK Sbjct: 418 GDD-RQKLQKEMMELYKREKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHAPWVAWIK 476 Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+A D ++++ L+GILP+ P + +GI P+ + +SM++Q K++P P D Q Sbjct: 477 DLSAPDTSSLYNLWGILPWAAPEPGSVLALIFIGILPLCLGVSMWLQQKLNPSPTDPTQK 536 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MI WMP VF+F L SF +GL+IYW +NVI+ QQ VIM+ HG + + + S+F + Sbjct: 537 MIFAWMPWVFMFMLGSFASGLVIYWIANNVITFSQQYVIMRSHGHKPDVFGNILSSFKRK 596 >gi|149203002|ref|ZP_01879973.1| putative inner membrane protein translocase component YidC [Roseovarius sp. TM1035] gi|149143548|gb|EDM31584.1| putative inner membrane protein translocase component YidC [Roseovarius sp. TM1035] Length = 611 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 203/529 (38%), Positives = 319/529 (60%), Gaps = 23/529 (4%) Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 +PR+ + PSL G+I+L+G + DD+ L+ Y + S IV L++P + Y+A + Sbjct: 72 APRLTIDTPSLKGTISLQGGRIDDIFLKNYRETIDPASEIVRLMAPVGNETPYYALYGWA 131 Query: 128 STANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDT 185 A ++P +NT+W + SG+ LT +TP+ L + N ++F R +S+DE ++F + + Sbjct: 132 PGAGLTPDQVPGANTLWQVESGEKLTTSTPVTLSWDNGAGLIFRRELSVDEDFMFSVRQS 191 Query: 186 VTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK----- 239 V N + +P G + RH +P N F + EG I ++ D +L E Y D+E+ Sbjct: 192 VENTGATAVSLAPYGILARHGRPADLKNFFILHEGLI-MMADGTLSEIDYDDVEEYPFNA 250 Query: 240 -----SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 + ++ E N W+G +D YW + IP+ +SF + K+ YQ + Sbjct: 251 REGAPAEVTQVTE-NGWIGFTDHYWMTTLIPAAGSSFKAVAKF-DPQRGIYQTEAVQPTQ 308 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 T+ PG++ + LFAGAKE+ TI HY+ + + RF IDWGWF+F+ KP+F ++ + Sbjct: 309 TVEPGQTASAETRLFAGAKEWATIRHYQNEQGVDRFLDSIDWGWFFFLTKPIFAVLHWLN 368 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 L+GN G AI+ T+ +K L PLA K YVS A MK++QP++++++E Q LQK Sbjct: 369 ALIGNMGWAIIALTLLIKALVLPLAYKSYVSMAKMKDLQPQMEKIKETAGDD-RQKLQKE 427 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NP AGC PILLQIP+FF++YKVI ++LE+RHAP+ GWIKDL+A DP+++F Sbjct: 428 MMELYKREKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHAPWVGWIKDLSAPDPSSLF 487 Query: 475 TLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 L+G+LP+ P + +GI P+ + +SM++Q K++P P D Q MI WMP VF+ Sbjct: 488 NLWGVLPWAAPEPGSIMALIFIGILPLALGISMWLQQKLNPSPTDPTQKMIFAWMPWVFM 547 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 F L SF +GL+IYW +NVI+ QQ +IM+ G + + + S F + Sbjct: 548 FMLGSFASGLVIYWIANNVITFSQQYMIMRSQGYKPDVFGNITSGFKRE 596 >gi|83854933|ref|ZP_00948463.1| putative inner membrane protein translocase component YidC [Sulfitobacter sp. NAS-14.1] gi|83842776|gb|EAP81943.1| putative inner membrane protein translocase component YidC [Sulfitobacter sp. NAS-14.1] Length = 604 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 222/596 (37%), Positives = 340/596 (57%), Gaps = 28/596 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ---VDNSYAAV-- 56 ++N N A LS I++ W + P E + + Q + V +S A Sbjct: 3 DQNKNLIFATVLSFIVILGWFLLFPPPETETITDPAATQQVTDATSTEAIVPSSAGAADN 62 Query: 57 ---LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 D+ AL +PR+ ++ + GSI+L G + DDL+L+ Y+ + +SPIV+LLSP Sbjct: 63 VTDASDEATAALEEAPRIPVETARISGSISLLGGRVDDLHLKDYNTTIEKDSPIVSLLSP 122 Query: 114 SNTKNAYFAELDYVSTANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + T +AY+A + A ++P NT+W L G+ L+ TP+ L + N LF RT Sbjct: 123 AGTPDAYYALYGWAPGAGIAPEQVPGPNTLWTLSQGETLSVETPVTLTWDNDAGQLFSRT 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLV 230 IS+DE+Y+FKI V N S + + +P G I RH P A N F + EG +A + + L+ Sbjct: 183 ISIDENYMFKIEQKVENTSENTVSLAPYGLIARHGIPSDAQNFFILHEGLVA-MNNGELL 241 Query: 231 EQKYSDIEKSSISNFHES-------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 E + DI + + N S N W+G + Y+ + IP E KYL Sbjct: 242 ETAWDDIPELDVVNGVPSKRIDGVTNGWIGFTGHYFMTNLIPDPEQPTRLTVKYLPRTEI 301 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 +Q + T+ G++ T T LFAGAKE+ + YE + +F IDWGWF+F+ Sbjct: 302 -FQTESVMPTQTVASGQTATVTTQLFAGAKEWEILRDYEAQ-GVYKFIDSIDWGWFFFLT 359 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F ++ + L+GN G+AI+ T+ +K L FPLA K YVS A MK +QP++++L+ K Sbjct: 360 KPIFWVLHHLNLLIGNMGVAIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMEKLK-KD 418 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q LQ+ M++LYK +NP AGC PILLQIP+FF++YKVI ++LE+RHAPF+G + Sbjct: 419 AGDDRQKLQQGMMELYKREKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHAPFFGPFQ 478 Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+A DPT+IF +G+LP+ P + +GI P+++ +SMF+Q K++P P D Q Sbjct: 479 DLSAPDPTSIFNFYGLLPWAAPEAGTVLALVFIGILPLLLGISMFLQQKLNPAPTDPTQQ 538 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + ++ ++ + Sbjct: 539 MIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDILGNIKGS 594 >gi|296775679|gb|ADH42956.1| preprotein translocase subunit YidC [uncultured SAR11 cluster alpha proteobacterium H17925_23J24] Length = 569 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 216/565 (38%), Positives = 329/565 (58%), Gaps = 19/565 (3%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD----- 60 N AIALS +++ W + P+IEE ++ K+ D V D Sbjct: 5 NVIFAIALSFAVLFGWSVIFETPKIEEQAKLEQSENYQKEDAASDAPSVNVEKKDLPIVS 64 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 R A+ + R+ +N +++GSI LKGA DD+ + Y+ + S+ VT L+P T Y Sbjct: 65 RNDAIKSTNRINFENENVVGSITLKGALIDDITFKKYNETLGSDKK-VTYLNPQETNEGY 123 Query: 121 FAELDYV-STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 F E + S +I LPN +T+W + L+ +P+ + +KN + I F + I LD +L Sbjct: 124 FIETGWAASNVEDIGLPNKDTLWKVKGNNKLSTGSPVIMEWKNKSGITFRKKIELDSKFL 183 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMR-HKP----QTATNTFGVQEGFIAVLGDKSLVEQKY 234 F++ + N S + P +I R KP + + T + +GFI V + +++ Sbjct: 184 FRVTQEIQNKSGSIVELYPYAQITRNQKPVLQAGSMSGTLILHDGFIGVFNED--LKEYD 241 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE- 293 D K + + WLGI+DK+W + +P K SF +F Y S+ ++A + AN+ Sbjct: 242 YDDIKDKKKEHNAESGWLGITDKFWITALVPEKNQSFRGEFVYKSES---FKANYIANKP 298 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 I + P S +T +F AKE I Y + +I +F++ IDWGW YF+ KP+F +++Y Sbjct: 299 IVVQPSSSKASTTKIFVAAKEVKVIDGYAEAESINKFDLTIDWGWLYFLTKPLFFIINYL 358 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + L NFGIAI+L T V+LLFFPLA + S A MK +QP++ L+E K + LQ+ Sbjct: 359 FELTKNFGIAIILVTAAVRLLFFPLANYSFRSMAKMKILQPELLRLKEVHKGDKVK-LQQ 417 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M+ LY+ +NPL+GC PIL+QIP FFAIYK++ ISLEMRH PF+GWIKDL+A DPT+I Sbjct: 418 EMMALYRREKVNPLSGCLPILIQIPFFFAIYKMLLISLEMRHQPFFGWIKDLSAQDPTSI 477 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 F +FG++P+ P F+ +G WPI+M +M++Q K++P P D QA I + P+ L+ Sbjct: 478 FNIFGLIPWDPPSFLIIGAWPIMMGATMYLQQKLNPTPPDPIQAKIFLFFPLFLTIILAP 537 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW+ +NV++I QQ VIMK Sbjct: 538 FPAGLVVYWTINNVLTIAQQWVIMK 562 >gi|254512338|ref|ZP_05124405.1| 60 kDa inner membrane insertion protein [Rhodobacteraceae bacterium KLH11] gi|221536049|gb|EEE39037.1| 60 kDa inner membrane insertion protein [Rhodobacteraceae bacterium KLH11] Length = 607 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 215/605 (35%), Positives = 340/605 (56%), Gaps = 35/605 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYP-------RIEEMNNERKNIQTVKQPNQVDNSYA 54 ++N N +A LS +++ W + P + E E +QT V A Sbjct: 3 DQNKNLILATVLSFLVIIVWFVLFPPPEPTPGEEQAEIAVLEGDEVQTPSASGTVGEVTA 62 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 A + A +PRV++ P L GS++L G + D+L L+ Y + + +PIV LL+P Sbjct: 63 AT---EEALPEEQAPRVQIDTPRLKGSLSLSGGRIDELFLKDYKVSIEEGAPIVELLAPV 119 Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 T++AY+A + A ++P NTVW L G++L P+ LV++N N + F R I Sbjct: 120 GTESAYYALYGWAPAAGLAGADVPGPNTVWALEQGEVLGVDAPVTLVWENGNGLTFRRMI 179 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI---AVLG--DK 227 S+D+ Y+F + +V N + ++ +P G + RH + G++ FI V+G D Sbjct: 180 SVDQDYMFTVTQSVENGTQSEVGMAPYGILARHGIGEDGDLPGLKNFFILHEGVIGMSDG 239 Query: 228 SLVEQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYL 278 +L E Y D+ I + + W+G +D YW + IP ++F + KY Sbjct: 240 TLTEVDYGDVRDFDIDPIERAQAEVYQVNQDGWIGFTDHYWMTTLIPEPGSAFKAAAKYD 299 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 S YQ + +T+ PG++ T LFAGAKE+ TI Y+ + + +F IDWGW Sbjct: 300 SR-RKIYQTETVLPTVTVAPGETTEVTTRLFAGAKEWETIREYQAE-GVQKFIDSIDWGW 357 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+F+ KP+F L+ L+GN G +I+ T+ +K + FPLA K YVS A MK +QP+++ Sbjct: 358 FFFLTKPIFWLLHNINALIGNMGWSIIGLTLIIKAILFPLAYKSYVSMAKMKELQPQMEA 417 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+E Q +Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+R AP+ Sbjct: 418 LKEAAGDDR-QKMQQGMMELYKKEKVNPAAGCLPILMQIPIFFSLYKVIFVTIELRQAPW 476 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +G +DL+A DPT+I LFG+LPF P + +GI P+++ +SM++Q K++P P Sbjct: 477 FGPFQDLSAPDPTSIMNLFGLLPFAGPQPDTFLALIFIGILPLLLGISMWLQQKLNPAPT 536 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QAMI WMP VF+F L SF +GL++YW +N I+ QQ +IM+ G + + ++S Sbjct: 537 DPTQAMIFAWMPWVFMFMLGSFSSGLVVYWIANNTITFTQQYLIMRSQGYKPDVFGNIKS 596 Query: 573 TFSKN 577 F + Sbjct: 597 GFKRT 601 >gi|294085069|ref|YP_003551829.1| 60 kDa inner membrane insertion protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664644|gb|ADE39745.1| 60 kDa inner membrane insertion protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 592 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 214/587 (36%), Positives = 342/587 (58%), Gaps = 36/587 (6%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEM-----------------------NNERKNI 40 N N +AIALS+++++ WQ F + P++E+ +++ ++ Sbjct: 5 NRNLILAIALSMVVLFGWQMFVIKPQLEQEAAQQELLAAQAQAEAALQASQQADSDTPSV 64 Query: 41 QTVKQPN-QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 N V+N + I D A+ +PR+ + P + GSI++ GA+ DD+ L Y Sbjct: 65 AQSSGSNVAVNNGAVSGGISD-AKPQDTAPRILIDAPLITGSISVMGARIDDVVLTDYKE 123 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 S +T L +++ +F E + S+ N +P ++T+W + +L+P P+ L Sbjct: 124 TQDPESKNITFLHKASSSQPFFVEFGWSSSDANQPMPRADTLWQ-TNKDVLSPGAPVTLR 182 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N + F R IS+++ YL D+V + I P G + RH + + + EG Sbjct: 183 WDNGQGLTFIRQISINDDYLISYDDSVQSTLDAAITLFPYGLVRRHGTPPTSGIYILHEG 242 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNF----HESNSWLGISDKYWASVFIPSKETSFHSQF 275 + V D++L E+ YSD+ + ++ W+G++DKYW + +P + T + F Sbjct: 243 PLGVF-DETLQEEDYSDLRDAEQGKIAVTPSKAGGWIGLTDKYWLAALLPDQNTRYDFSF 301 Query: 276 KYLSDGHARYQAKF-SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 + L+ RYQ + + + + P S++ +FAGAK + Y +DL IP F++ I Sbjct: 302 QSLAGSGERYQVDYIDSKGLVLAPNTSVSAKGRVFAGAKIVKLLDQYREDLGIPNFDLAI 361 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GWFYF+ KP F +++ L+GNFG+A + TV VK++FFPLA K Y S M+ + P Sbjct: 362 DFGWFYFLTKPFFYAINWLNELLGNFGLATIAFTVVVKVVFFPLANKSYQSMGKMRLLAP 421 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 KI +LRE+F + L K M+ LYK +NP AGC P+LLQIPVFFA+YKV+ +++EMR Sbjct: 422 KIQQLRERFGED-KMALNKEMMALYKAEKVNPAAGCLPVLLQIPVFFALYKVLFVTIEMR 480 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPF---YLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 HAPF+GWI DL+A DPT+IF +FG+LPF +LP F+ +G WPI+M +SMF+QM+++P P Sbjct: 481 HAPFFGWITDLSAPDPTSIFNVFGLLPFSVDFLPPFLQLGAWPIMMGVSMFLQMRLNPAP 540 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D QA + MP+ F F L++FPAGL+IYW+W+N++S+ QQ IM+ Sbjct: 541 PDPIQAKVFQLMPIFFTFLLATFPAGLVIYWTWNNLLSMGQQWYIMR 587 >gi|94495881|ref|ZP_01302460.1| 60 kDa inner membrane insertion protein [Sphingomonas sp. SKA58] gi|94424573|gb|EAT09595.1| 60 kDa inner membrane insertion protein [Sphingomonas sp. SKA58] Length = 568 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 209/568 (36%), Positives = 322/568 (56%), Gaps = 18/568 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQ-----PNQVDNSY 53 M+ N +A+ L+ I++ W Y +P N I+ KQ P+ + Sbjct: 1 MDDKKNIILAVLLTAAILFGWPYISNYFFP---TANPPATKIEGGKQVPVARPDADPAAD 57 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + I DRA L SPR+ ++ L GSINLKGA+ DD+ L Y ++ +SP V L SP Sbjct: 58 SPAAIRDRALVLRESPRIPIRTAKLTGSINLKGARIDDIVLPTYKETIAKDSPAVRLYSP 117 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 S T++AYFA + + P+ NT+W G LTPT+P+ L + N LFE +S Sbjct: 118 SGTQDAYFAGFGW--QGEGLRAPDRNTLWT-AQGSALTPTSPVTLSWNNGAGQLFEIRLS 174 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 +D++Y+ V+N + P I R +T+ + G + V + + Sbjct: 175 VDDNYMITAAQKVSNTGTGTVGVKPYAYISRTGIPKDPDTWTIHVGPMGVFNGAANYDVN 234 Query: 234 YSDIEKS-SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 Y D++K S+ +F W+G +DKYW S +P+ + F QF+ +YQA + Sbjct: 235 YKDLDKGPSVQSFQSKGGWIGFTDKYWLSALVPAADADFAGQFR--KGAGTQYQADVALG 292 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + PGK++T T LF GAKE T+ Y+ D +P F+ IDWGWFY+ KP+F L+ + Sbjct: 293 SNMVAPGKAVTQTQRLFVGAKEVKTLEAYQ-DAGVPLFDRAIDWGWFYWFEKPIFALLHW 351 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + +GNFG+AI+ T V+ + FP+A++Q+ S A M+ +QPK+ L+EK K Q LQ Sbjct: 352 LFEHIGNFGVAIICLTFVVRAIMFPIAQRQFSSMAAMRALQPKMKALQEKHKDDK-QQLQ 410 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 M++LYK +NPLAGC PI +QIP+FFA+YKV+ +++EMRH PF WIKDL+A DP + Sbjct: 411 MKMMELYKQEKVNPLAGCLPIFIQIPIFFALYKVLMLTIEMRHQPFVLWIKDLSAPDPLH 470 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I LFG+L F P F+ +G+ +++ +SM+ Q K++P D Q I+ MP + +F ++ Sbjct: 471 ILNLFGLLDFTPPAFLGIGVLALLLGISMYFQFKLNPTQMDPMQQQIMGIMPWMMMFIMA 530 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMH 560 F AGL++YW +N +S+ QQ + + H Sbjct: 531 PFAAGLLVYWITNNCLSMAQQWWLYRKH 558 >gi|167644608|ref|YP_001682271.1| putative inner membrane protein translocase component YidC [Caulobacter sp. K31] gi|254772764|sp|B0T872|OXAA_CAUSK RecName: Full=Inner membrane protein oxaA gi|167347038|gb|ABZ69773.1| 60 kDa inner membrane insertion protein [Caulobacter sp. K31] Length = 630 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 219/621 (35%), Positives = 330/621 (53%), Gaps = 54/621 (8%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK-----NIQTVKQPNQV--DNSYAA 55 +N F+ A +++I Y Q + P+ ++ E + Q QP + Sbjct: 7 KNTLMFLVCAFAILIGY--QFLVMGPQQKQREAELRAKKAAEAQVAVQPGMTIGADGTPQ 64 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 L R +A + SPR+ + P+L GSI LKGA+ DDL L+ Y NSP V L P Sbjct: 65 PLKLSRDEAKAQSPRIAVDTPALSGSIALKGARIDDLWLKRYTQTADKNSPPVELFRPEG 124 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 ++A+FA+ + A LP TVW G++L PTTP+ L + N ++F RTIS+D Sbjct: 125 AEHAWFADFGWAGIAGMTGLPTPQTVWTAAPGQVLRPTTPVVLTYDNGQGLVFTRTISVD 184 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFG----VQEGFIAVLGDKSLV 230 +F + DTV N + +P + R P + G V EG I VLG V Sbjct: 185 ADAMFTVADTVRNQGGAAVALAPYASVQRQGIPTEGPHGLGKTQIVYEGGIGVLGGIDGV 244 Query: 231 E---------QKYSDIEKSS--ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 E KY +K N W+G++DKYW + +P + +F+ Sbjct: 245 EGGKYILQNKAKYPKWKKDKPLQDNLQSKGGWIGMTDKYWLAALVPQQSEMIKGRFQVKP 304 Query: 280 -DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL------------- 325 G Y++ F+ ++ G ++T T LFAGAK P + Y+ Sbjct: 305 VSGVDVYESAFTGAPKSLAAGATVTNTTRLFAGAKTVPLLTRYQYGGKPVVWWEFWNRPA 364 Query: 326 -AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 IP F+ +DWG F I +P+F ++ FY +VGNFG+AIML TV +KL+ FPLA K Y Sbjct: 365 NVIPNFDKAVDWGMFEVITRPIFNVLEIFYKMVGNFGVAIMLLTVALKLILFPLADKSYE 424 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A MK I P++++L+ K K P + Q+ M+ LY INP+ GC P+L+QIP+F+++Y Sbjct: 425 SMAKMKKIAPEVEKLKVKNKDDPAK-QQQEMMALYAKEKINPMMGCVPMLIQIPIFYSLY 483 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF----------YLPGFMHVGIWP 494 KV+++++EMRHAPF+GWI DL+A DP+ LFG++ + +L G +H+G+WP Sbjct: 484 KVLTVTIEMRHAPFFGWITDLSARDPSTFMNLFGLIHWDPATAPLIGAFLSGPLHIGVWP 543 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 ++ +M++ M+PP D Q I + P+VF F LS F GL+IYW WSNV++I+QQ Sbjct: 544 LLYGFTMWLTTAMNPPAGDPIQQKIFQFFPIVFTFTLSQFAVGLVIYWCWSNVLTILQQY 603 Query: 555 VIMKMHGAE---IGLIDRLRS 572 +IM + + L++RLR Sbjct: 604 IIMHRYKVDNPIDQLVNRLRG 624 >gi|84515675|ref|ZP_01003036.1| putative inner membrane protein translocase component YidC [Loktanella vestfoldensis SKA53] gi|84510117|gb|EAQ06573.1| putative inner membrane protein translocase component YidC [Loktanella vestfoldensis SKA53] Length = 605 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 209/600 (34%), Positives = 332/600 (55%), Gaps = 31/600 (5%) Query: 2 ERNWNYFVAIALSVIIVYAW------QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 E+N N +A LS ++ W + V P + + P D + A Sbjct: 3 EQNRNLILATLLSFAVIMTWTLLFPPEEIAVDPAAQVATQSVDPTVPLADPVTPDATSPA 62 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 ++ Q R+ ++ P L GSI++ G + DDL L Y + ++PIV LL P Sbjct: 63 IV----EQTAPDVARIAIETPELTGSISMLGGRIDDLALTDYRETLDEDAPIVRLLRPVG 118 Query: 116 TKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 +AYFA + +T + +P +T+W++ +G+ LTP+TP+ LV+ N +F IS Sbjct: 119 ELDAYFAAFGWTATDGIDPAAVPGPDTIWSVETGETLTPSTPVTLVWDNGAGQIFRTEIS 178 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQ 232 +D+ ++F ++ N + + P G + RH +P A F + EG + + D L E Sbjct: 179 VDDLFMFSFAQSIQNVGTETVSARPYGLVRRHGEPSDAKRFFILHEGLVR-MSDGELEET 237 Query: 233 KYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 YS+I + + + W+G +D +W + IP+ T F S KY + Sbjct: 238 SYSNITDHTFDERERTLADRIDVQQSGWIGYTDHFWMTTLIPATGTPFRSTSKYF-EARD 296 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 YQ + + G++ T T LFAGAKE+ I HYE + + RF IDWGWF+F+ Sbjct: 297 LYQVEAVMPPSVVPAGETATVTIRLFAGAKEWEAITHYENETGVDRFIDSIDWGWFFFLT 356 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ ++GN G +I+ T+ +K L PLA K YVS A MK +QP++++L+E+ Sbjct: 357 KPIFWLLHNLNIIIGNMGWSILALTLILKALVLPLAYKSYVSMARMKELQPEMEKLKERA 416 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q +Q+ M++LYK + +NP AGC PILLQIP+FF++YKVI +++E+RHAP+ GWI Sbjct: 417 GDD-RQAMQQGMMKLYKENTVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPWIGWID 475 Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+A DP+++ LFG+LP+ P + +G+ PI++ +SM++Q K++P P D Q Sbjct: 476 DLSAPDPSSLINLFGLLPYAAPDPGSILSLIFIGLLPILLGISMWMQQKLNPAPTDPTQQ 535 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MI WMP VF+F L F +GL++YW +N I+ VQQ IM+ HGA+ + ++S + Sbjct: 536 MIFAWMPWVFMFMLGGFASGLVLYWIANNCITFVQQYAIMRSHGAKPDVFGNIKSGLKRK 595 >gi|126728217|ref|ZP_01744033.1| putative inner membrane protein translocase component YidC [Sagittula stellata E-37] gi|126711182|gb|EBA10232.1| putative inner membrane protein translocase component YidC [Sagittula stellata E-37] Length = 600 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 219/605 (36%), Positives = 352/605 (58%), Gaps = 37/605 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPR---IEEMNNERKNIQTVKQ-------PNQVDN 51 E+N N F+A ALS +++ W F ++P +E+ N + QT P Sbjct: 3 EQNKNLFLATALSFVVILVW--FILFPPQDPVEDPNAPAEVSQTADPATGVAAVPEAAPG 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + AA + A+ +PR+ L L GSI+L G + DDL L+ Y + + S+ IV + Sbjct: 61 TEAAAPAGEPVDAVDDAPRLPLDTARLEGSISLTGGRLDDLRLKDYTVSLDSDE-IVQVF 119 Query: 112 SPSNTKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 + +AY+ + + E+P +NT W++ +G+ LT TP+ L + + + ++F Sbjct: 120 HRVGSSDAYYTLYGWAPGGGLSMDEVPGANTPWSVETGETLTTETPVTLRWDSPSGLIFR 179 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKS 228 RTI++DE+Y+F + T+ N S + +P G + RH +PQ F + EG I+++ D Sbjct: 180 RTIAVDENYMFTVTQTIENASDASVSLAPYGVLARHGEPQNVKKFFILHEGGISMI-DGE 238 Query: 229 LVEQKYSDIEKSSISN--FHESNSWLGISDKYWASVFIPS----KETSFHSQFKYLSDGH 282 L E Y D + + E+ W G +D YW S IP+ K ++FH+Q + Sbjct: 239 LTETDYDDFQTAGQHQDVTMETAGWTGFTDHYWMSTLIPTQPGTKVSTFHNQSNDI---- 294 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQ +T+ PG++ ++ LFAGAKE+ TI Y+K+ + RF IDWGWF+F+ Sbjct: 295 --YQTTARMPTMTVAPGETQQVSSKLFAGAKEWETIREYQKN-GVDRFIDSIDWGWFFFL 351 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F ++ + + ++GN GIAI+ T+ +K+L FPLA K Y S A MK +QP++++L+E+ Sbjct: 352 TKPIFAVLHWLHGVIGNMGIAIIGLTILLKILLFPLAYKSYASMAKMKELQPEMEKLKER 411 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + LQK M+ LYK +NP AGC PILLQIP+FF++YKVI ++LE+RHA F+G Sbjct: 412 AGDDR-EKLQKEMMALYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHANFFGPF 470 Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 +DL+A DPT+++ LFG+LP+ P + +GI PI++ +SM++Q K++P PAD Q Sbjct: 471 RDLSAPDPTSLYNLFGLLPWAAPEAGSILALVFIGILPILLGISMWLQQKLNPAPADPTQ 530 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG ++ ++ +F + Sbjct: 531 QMIFAWMPWVFMFMLGGFASGLVVYWITNNTITFTQQYLIMRSHGYHPNVLGNIKGSFKR 590 Query: 577 NYNSQ 581 + Sbjct: 591 GKKDE 595 >gi|83941456|ref|ZP_00953918.1| putative inner membrane protein translocase component YidC [Sulfitobacter sp. EE-36] gi|83847276|gb|EAP85151.1| putative inner membrane protein translocase component YidC [Sulfitobacter sp. EE-36] Length = 604 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 219/596 (36%), Positives = 338/596 (56%), Gaps = 28/596 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ---VDNSYAAV-- 56 ++N N A LS I++ W + P E + + Q + V +S A Sbjct: 3 DQNKNLIFATVLSFIVILGWFVLFPPPETETITDPAATQQVTDATSTEAVVPSSAGAADN 62 Query: 57 ---LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 D+ AL +PR+ ++ + GSI+L G + DDL+L+ Y+ + ++PIV+LLSP Sbjct: 63 VTDASDEATAALEEAPRIPVETARISGSISLLGGRVDDLHLKDYNTTIEDDAPIVSLLSP 122 Query: 114 SNTKNAYFAELDYVSTANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + T +AY+A + A ++P NT+W L G+ L+ TP+ L + N LF RT Sbjct: 123 AGTPDAYYALYGWAPGAGIAPEQVPGPNTLWTLSQGETLSVETPVTLTWDNDAGQLFSRT 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLV 230 IS+DE+Y+FKI V N S + + +P G I RH P A N F + EG +A + + L+ Sbjct: 183 ISIDENYMFKIEQKVENTSENSVSLAPYGLIARHGIPSDAQNFFILHEGLVA-MNNGELL 241 Query: 231 EQKYSDIEKSSISNFHES-------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 E + DI + N S N W+G + Y+ + IP KYL Sbjct: 242 ETAWDDIPELDAVNGVPSKRIDGVTNGWIGFTGHYFMTNLIPDPAQPTRLSVKYLPRTEI 301 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 +Q + T+ G++ T T LFAGAKE+ + YE + +F IDWGWF+F+ Sbjct: 302 -FQTESVMPTQTVARGQTATVTTQLFAGAKEWEILRDYEAQ-GVYKFIDSIDWGWFFFLT 359 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F ++ + L+GN G+AI+ T+ +K L FPLA K YVS A MK +QP++++L+ K Sbjct: 360 KPIFWVLHHLNLLIGNMGVAIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMEKLK-KD 418 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q LQ+ M++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G + Sbjct: 419 AGDDRQRLQQGMMELYKREKVNPAAGCLPILMQIPIFFSLYKVIFVTLELRHAPFFGPFQ 478 Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+A DPT+IF +G+LP+ P + +GI P+++ +SMF+Q K++P P D Q Sbjct: 479 DLSAPDPTSIFNFYGLLPWAAPEAGTVLALVFIGILPLLLGISMFLQQKLNPAPTDPTQQ 538 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + ++ ++ + Sbjct: 539 MIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDILGNIKGS 594 >gi|86135820|ref|ZP_01054399.1| putative inner membrane protein translocase component YidC [Roseobacter sp. MED193] gi|85826694|gb|EAQ46890.1| putative inner membrane protein translocase component YidC [Roseobacter sp. MED193] Length = 602 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 219/584 (37%), Positives = 334/584 (57%), Gaps = 30/584 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFY----VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ++N N +AIALS +++ W F+ V P E + E + A Sbjct: 3 DQNKNLILAIALSSLVLLGWMYFFPPPEVTPAPEAVATETAPADGTASSPSAAVAADAAT 62 Query: 58 IDDRAQA-LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP-IVTLLSPSN 115 +A S +PR+ +++ + GSI+L+G + DDL L+ Y +++++P IV LSP Sbjct: 63 SQPSEEASASDAPRISIESDRITGSISLQGGRIDDLALKDYR--ITNDAPEIVQFLSPVG 120 Query: 116 TKNAYFAELDYV--STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 ++AY+A + S ++P +NT+W + LTP + + L + N + F RTI+ Sbjct: 121 QQDAYYALYGWAPGSGLGAEDVPGANTLWTAPADAELTPDSSVTLTWDNGKGLTFNRTIA 180 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQ 232 +DE Y+F I +VTN S + +P G + RH +P N F + EG + + D L E Sbjct: 181 VDEDYMFAITQSVTNASGGAVSLAPYGTLARHGEPADMKNFFILHEGVVG-MADGELAEL 239 Query: 233 KYSDI-------EKSSISNFHE--SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 YSD+ S S + S+ W+G +D YW S IP+ +F S KY + Sbjct: 240 DYSDVADFDVDPRDGSRSEVKQVASDGWIGFTDHYWMSTLIPAPGQAFRSSVKY-DERRD 298 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 YQ +T+ G++ T LF+GAKE+ TI YEK I F IDWGWF+F+ Sbjct: 299 IYQTDVVLPTMTLADGETSEVTTQLFSGAKEWATIRAYEKG-GIAGFLDSIDWGWFFFLT 357 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F ++ + L+GN G AI+ TV +K++ FPLA K Y S A MK +QP++++L+E+ Sbjct: 358 KPIFAVLHWLNALIGNMGWAIIALTVLIKIIVFPLAYKSYASMAKMKELQPEMEKLKERA 417 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q QK +++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G + Sbjct: 418 GDDR-QKQQKEIMELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQ 476 Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+A DPT+I LFG+LPF P + +GI P+++ +SM++Q K++P P D Q Sbjct: 477 DLSAPDPTSIMNLFGLLPFAGPTPDSIMALVFIGILPLLLGISMWLQQKLNPAPTDPTQQ 536 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG Sbjct: 537 MIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHG 580 >gi|294675902|ref|YP_003576517.1| inner membrane protein OxaA [Rhodobacter capsulatus SB 1003] gi|294474722|gb|ADE84110.1| inner membrane protein OxaA [Rhodobacter capsulatus SB 1003] Length = 615 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 212/547 (38%), Positives = 304/547 (55%), Gaps = 41/547 (7%) Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 +PRV + P+L GSI+L GA+FDDL+L+ YH + SP+V LL+P + A+ YV Sbjct: 65 APRVTIDTPALTGSISLLGARFDDLSLKHYHEKLDPASPLVRLLAPVGGSDLNAAKPYYV 124 Query: 128 -------STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 + ++P T+W +G LTP TP+ L + N + F RTI++D YLF Sbjct: 125 VQGWSALAGVTAAQVPGPKTLWTAPAGAKLTPETPLVLTWDNGAGLTFTRTIAVDPQYLF 184 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI--- 237 + D VTN + +P G I RH + + EG + + + L E KY I Sbjct: 185 TVTDAVTNTGAAAVSIAPWGIIARHGIPAGNRVYVLHEGAVR-MTNGELQEIKYKKITDL 243 Query: 238 -----EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 E + ++ W G +DKYW + IP F S KY+ YQ + Sbjct: 244 DALEGEGQADVRSADTGGWAGFTDKYWMTTLIPDT-ARFTSVVKYVPSADL-YQTETRQP 301 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA----------------IPRFEMLIDW 336 + I G S + T LFAGAKE+ I Y+ D I RF IDW Sbjct: 302 AVEIAAGASTSVTMRLFAGAKEWEAIAQYQNDPGMFDRLFGDKIDPTQPQITRFVDSIDW 361 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW+YF+ KPMF L+ + + ++GN G AI+ TV +KL+ FPLA+ Y+S A MK IQP + Sbjct: 362 GWYYFLTKPMFRLLHWLHAVLGNMGWAIIALTVIIKLIVFPLARTSYISMAKMKEIQPAM 421 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 + L+E+ K Q LQ+ M++LYK INP AGC PILLQIP+FF++YKVI +++E+ HA Sbjct: 422 EALKERTKDDK-QALQRGMMELYKREKINPAAGCLPILLQIPIFFSLYKVIYVTIELYHA 480 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPP 510 P+ GWIKDL+A DP++I LFG+LP+ P +G+ PI++ +SM+ Q K++P Sbjct: 481 PWIGWIKDLSAPDPSSILNLFGLLPYATPEPGSLLFIFSLGVLPILLGISMWFQQKLNPA 540 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QA I WMP +F+F L F +GL++YW +NVI+ +QQ IM +HG L + Sbjct: 541 PTDPSQAAIFAWMPWIFMFMLGGFASGLVLYWIANNVITFIQQYSIMSLHGKRPDLFGNI 600 Query: 571 RSTFSKN 577 + F K Sbjct: 601 IAGFRKK 607 >gi|260427287|ref|ZP_05781266.1| inner membrane protein OxaA [Citreicella sp. SE45] gi|260421779|gb|EEX15030.1| inner membrane protein OxaA [Citreicella sp. SE45] Length = 607 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 213/605 (35%), Positives = 346/605 (57%), Gaps = 37/605 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEE-MNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ++N N +A LS +++ W F ++P EE ++++ + T + + + Sbjct: 3 DQNKNLLIATGLSFVVILIW--FLLFPPPEEPAVDQQEPVATAPVEGDAATTPSTATPTE 60 Query: 61 RAQALSMSPRVE--------LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 + + +P+ E + L GSI+L G + D+L L+ Y + + +SP V +L Sbjct: 61 GTEGTATAPQAETADAPRLPIDTARLGGSISLTGGRIDELILKDYTVTIDEDSPKVQILE 120 Query: 113 PSNTKNAYFAELDYVSTANNIE---LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 P T +AY+A + + N +E +P +NT W + SG LT +P+ L + + + F Sbjct: 121 PVGTGHAYYALYGW-APGNGLEPADVPGANTEWQVESGSSLTVDSPVTLRWDSPAGLTFR 179 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKS 228 RT+++D++++F + +V N + +P G + RH +P F + EG +A + D Sbjct: 180 RTVAVDKNFMFTVTQSVENTGEASVSAAPYGIVARHGEPVGRKKFFVLHEGVVA-MADGK 238 Query: 229 LVEQKYSDI----------EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 L E YSD+ ++ ++ E N W+G +D YW + IPS+ T+F KY Sbjct: 239 LNEIDYSDMPDMDMVASEGARADVTQVAE-NGWIGFTDHYWMTTLIPSQGTAFKQVAKY- 296 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 +G YQ + +T+ PG++ T L+AGAKE+ TI YE D + RF IDWGW Sbjct: 297 DEGRDIYQTEAVLPTVTLAPGETQQVTTQLYAGAKEYETIRGYE-DAGVDRFIDSIDWGW 355 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+F+ KP+F L+ + + L+GN G +I+ T+ +K + FPLA K YVS A MK +QP++++ Sbjct: 356 FFFLTKPIFWLLHHLHGLIGNMGWSIIALTITLKAILFPLAFKSYVSMAKMKELQPEMEK 415 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+E+ Q LQ+ M+QLYK +NP +GC PILLQIP+FF++YKVI ++ E+R AP+ Sbjct: 416 LKERAGDDR-QKLQQEMMQLYKKEKVNPASGCLPILLQIPIFFSLYKVIFVAFELRQAPW 474 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +G +DL+ DPT+++ LFG+LP+ P + VGI PI++ +SMF+Q K++P PA Sbjct: 475 FGPFQDLSTPDPTSLYNLFGLLPWAAPEPGSTLALIFVGILPILLGISMFLQQKLNPAPA 534 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D Q MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + ++S Sbjct: 535 DPTQKMIFAWMPWVFMFMLGGFASGLVVYWITNNTITFTQQYLIMRSQGYTPDVFGNIKS 594 Query: 573 TFSKN 577 F K Sbjct: 595 GFKKT 599 >gi|209542536|ref|YP_002274765.1| 60 kDa inner membrane insertion protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530213|gb|ACI50150.1| 60 kDa inner membrane insertion protein [Gluconacetobacter diazotrophicus PAl 5] Length = 589 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 205/571 (35%), Positives = 328/571 (57%), Gaps = 23/571 (4%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 + VA LS +++ ++ Y P+ ++ QT +Q D + A + + Sbjct: 5 RFIVATLLSAMVLVGFE--YFMPKQAHHEVAQQAAQTSRQTPPTDAARAPAPVAGASSQP 62 Query: 66 SMSP------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 +P R+ + P + GSI+L GA+ DD+ LR YH V+ SP V +L P + + Sbjct: 63 VSTPAPQAETRLAIDAPKVAGSIDLLGARLDDMVLRDYHETVAKGSPQVRILEPGHDQQP 122 Query: 120 YFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 + E+ +++ + +P++ TVW+ + K LT P+ L + N + F+ +S+D HY Sbjct: 123 NYVEIGWMNLPGGQVRVPDATTVWSADAPK-LTSDRPVTLSWDNGAGVTFQIVVSIDAHY 181 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +F I + N S + P R+ R T T + V EG I+V+ D L E Y + Sbjct: 182 MFGIEQRIVNRSAQPVSLYPYARVDRAYTPTETGGYLVHEGPISVI-DGRLDESSYKSLR 240 Query: 239 KSSISNFHES------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQAKFSA 291 + + S W GI+DKYW + IP + T+ + Y ++G A YQ F A Sbjct: 241 TGATPPGNLSWTKGGQGGWAGITDKYWLTAVIPQQGTAVTGSYGYQANGGAGVYQVGFIA 300 Query: 292 NEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 T++ PG + T + +FAGAKE + Y+ L IP F +D+GWF F+ +P+F ++ Sbjct: 301 QAATVVAPGTTGATVSHVFAGAKEVNLLEQYQSSLHIPDFWKAVDFGWFAFLTRPIFYVL 360 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + L+GNFG+A+M T+ VK LFFPLA +Q+ S A M+ +QPK+ ELRE++K S Sbjct: 361 DWLNTLLGNFGLALMAFTLLVKALFFPLATRQFRSMAKMRQLQPKVQELRERYK-SDQMA 419 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 L + M+ LYK +NP AGC P+++QIPVF+++YK + I++EMRHAPF+GWI DL+A D Sbjct: 420 LNQNMMALYKAEGVNPAAGCLPMVVQIPVFWSLYKDLYITIEMRHAPFFGWIHDLSAPDL 479 Query: 471 TNIFTLFGILPF---YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 TN+F LFG++P+ L ++ +G+WPI+ +MF+Q K++P P D Q + MPV+F Sbjct: 480 TNLFNLFGLIPWDPNVLSPYLQLGVWPILFGATMFLQQKLNPAPTDPAQQRMFQMMPVLF 539 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F ++ PAGL+IY+ W+N++++ QQ VI + Sbjct: 540 TFFMARQPAGLVIYYCWNNLLTVAQQMVIQR 570 >gi|83950483|ref|ZP_00959216.1| inner membrane protein YidC, putative [Roseovarius nubinhibens ISM] gi|83838382|gb|EAP77678.1| inner membrane protein YidC, putative [Roseovarius nubinhibens ISM] Length = 599 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 200/524 (38%), Positives = 313/524 (59%), Gaps = 16/524 (3%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV-- 127 RV ++ PS+ GSI+L+G + D+L L Y + + IVTLL+P+ + + Y+A + Sbjct: 77 RVAVETPSVTGSISLRGGRLDELALNNYRESLDPGAEIVTLLNPTGSASPYYALFGWAPG 136 Query: 128 STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVT 187 + N+ +P +NT+W++ SG+ LTP +P+ L+++N + F R IS+D Y+F I TV Sbjct: 137 TGLNSDSVPGANTLWSVESGETLTPESPVTLLWENGQGLTFRREISVDAKYMFTIRQTVE 196 Query: 188 NNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 N +P G I RH +P N F + EG + + D L E Y D E + Sbjct: 197 NTGDAAPVLAPYGIIARHGEPADLKNFFILHEGAVQ-MADGELNEIDYDDFEGAGNHTPL 255 Query: 247 E--SNSWLGISDKYWASVFIPSKETSFH-SQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + +N W G +D YW + IP ET F S F+ YQ IT+ PG++ Sbjct: 256 KVATNGWTGFTDHYWMTTLIPRGETGFDLSTFQ--DPRRNIYQTTVKQPAITLEPGQTAE 313 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T LFAGAKE+ TI +Y+ + +F IDWGWF+F+ KP+F L+ + +GN G + Sbjct: 314 ATTQLFAGAKEWETIRNYQNKGGVDKFLDSIDWGWFFFLTKPIFALLHWLNQQIGNMGWS 373 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ +KL+ PLA K YVS A MK +QP++++++E+ Q LQK M+ LYK Sbjct: 374 IIALTLIIKLVLLPLAYKSYVSMAKMKELQPQMEKIKERAGDD-RQALQKEMMALYKKEK 432 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP +GC PILLQIP+FF++YKVI ++LE+RHAP+ GWI+DL+A DP++++ L+G+LP+ Sbjct: 433 VNPASGCLPILLQIPIFFSLYKVIFVTLELRHAPWIGWIRDLSAPDPSSLYNLWGLLPWN 492 Query: 484 LP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 P + +GI P+++ +SM++Q K++P P D Q M+ WMP +F+F L SF +G Sbjct: 493 APEPGSLLALIFIGILPLLLGISMWLQQKLNPAPTDPTQKMVFAWMPWIFMFMLGSFASG 552 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 L++YW +N I+ QQ IM+ G + + ++S F + + Sbjct: 553 LVVYWIANNTITFTQQYAIMRSQGYKPDVFGNIKSGFKRTRKTD 596 >gi|88658314|ref|YP_507580.1| putative inner membrane protein translocase component YidC [Ehrlichia chaffeensis str. Arkansas] gi|88599771|gb|ABD45240.1| inner-membrane protein, 60 kDa [Ehrlichia chaffeensis str. Arkansas] Length = 579 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 213/567 (37%), Positives = 341/567 (60%), Gaps = 27/567 (4%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-RKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 N +A+ LSV+I+ W+ ++Y + + N + ++D+++ R++ Sbjct: 6 NLILAVILSVLIMMGWR--FIYDKFFTTQHAIEDNTSSDAMIPEIDDNFIH---KTRSEV 60 Query: 65 LSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 + + R++L N + GSI+LKGAQFDDL + YH+ NS + LLSP T+N YF Sbjct: 61 IESNTNIRIKLSNEKMNGSISLKGAQFDDLIFKNYHVTPDKNSEGIVLLSPEETENVYFI 120 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 E ++ + I +P +++WN L+P PI L + N ++F+ I+LD Y+FKI Sbjct: 121 EFGWIDPQHKITVPTHSSIWNS-DQSTLSPNNPITLTWDNKQGVVFKIKITLDNDYMFKI 179 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD-------KSLVEQKYS 235 VTNN+ I P GRI R K + + EG + G+ K++ ++K Sbjct: 180 EQMVTNNTDSIINLIPYGRINRSKHTAEKSYWISHEGAVGSFGNTLKEWTYKAITKEKNI 239 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIP--SKETSFHSQFKYLS-DGHARYQAKFSAN 292 I++ I++ N W+GI DKYW + IP S++++ + K+ + R+Q FS + Sbjct: 240 KIQQQDIND--NQNQWIGIGDKYWFTALIPNVSQKSNLNFHVKHAKHNSKDRFQVDFSHD 297 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 P ++T+ N+LFAGAKE + Y+ +L I F+ +D+G YFI KP+F+L+ Y Sbjct: 298 NYIAHPNNTVTSINYLFAGAKELKLLDTYKDNLNISLFDKAVDFGVLYFITKPVFLLLEY 357 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F N++GNFG+AI+L T+ +KL+ FPL+ K YVS ++++QP I ++E +K + + Sbjct: 358 FNNVIGNFGLAILLLTIVIKLIMFPLSHKSYVSMLKLRHLQPDIVRIKELYKNDNDK-MS 416 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 K + ++K +N+NP++G P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL++ D N Sbjct: 417 KEISAIFKKNNVNPMSGFVPVLIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLSSFDTAN 476 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVF 529 I T+FG+L F P + +GI P+I+ ++M IQ K+ S DK QA + ++P +F+F Sbjct: 477 ILTIFGLLKFNPP--ICIGILPVILGITMIIQQKLNNHSSLNQDKTQANFMKFLPYIFIF 534 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 SSFPAGLIIYW SN I+IVQQ +I Sbjct: 535 IFSSFPAGLIIYWICSNSITIVQQLII 561 >gi|119383628|ref|YP_914684.1| putative inner membrane protein translocase component YidC [Paracoccus denitrificans PD1222] gi|166975878|sp|A1B0E4|OXAA_PARDP RecName: Full=Inner membrane protein oxaA gi|119373395|gb|ABL68988.1| protein translocase subunit yidC [Paracoccus denitrificans PD1222] Length = 635 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 221/622 (35%), Positives = 333/622 (53%), Gaps = 54/622 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYV-YPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 + N N +A+ LS +++ W F+ P + + Q QP + + Sbjct: 3 DNNRNLILAMVLSALVMLVWSIFFAPEPVPPAQDTPAASTQGTAQPEAGGPATPGAVPQG 62 Query: 61 RAQALSMSP----------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 A L + RV +++ SL G+I+L G + DDL L GY + + SP V L Sbjct: 63 AAPELEAAAASSDPSANAGRVAIESSSLAGTISLAGGRIDDLELTGYRETLDTRSPFVRL 122 Query: 111 LSPSNTKNAYFAELDYVSTANNIEL-----------------------PNSNTVWNLISG 147 LSP+ + AE V+ EL P TVW + SG Sbjct: 123 LSPT-AQTTVQAEGSPVAPGGGAELAVQKPYYAVYGWMPAAGTDPALVPGPATVWEVESG 181 Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 L P P+ L + N +F RT LD+ +LF + T+ N +P G + RH Sbjct: 182 AKLGPGQPVTLRWDNGAGQIFRRTYELDDKFLFTVTQTLENTGTAPFSAAPYGILARHGK 241 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK---------SSISNFHESNSWLGISDKY 258 N F + EG + + D L+E+KY D+ K + + E N W+G +DKY Sbjct: 242 PDTQNFFVLHEGAVGMT-DGKLLEKKYKDMTKLDPLPGEGPAELVEVQE-NGWIGFTDKY 299 Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 W + P+ SF + KY + G YQ + T+ PG + T++++LFAGAK + I Sbjct: 300 WMTTLAPAPGQSFTAVAKY-APGADIYQTEARMPVQTVAPGATGTSSSYLFAGAKVWEVI 358 Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 + Y+ + I RF IDWGWFYF+ KP+F L+ + + ++GN G AI+ T +KLL FPL Sbjct: 359 NGYQTNPGIDRFVDSIDWGWFYFLTKPIFRLLHWLHGMIGNMGWAIIALTFVLKLLVFPL 418 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 A+K Y+S A MK +QP+++ ++E+ QK +++LYK +NP AGC P+LLQIP Sbjct: 419 ARKSYISMAKMKELQPQMEAIKERTGDD-RMKFQKEVMELYKREKVNPAAGCLPVLLQIP 477 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG---FMHVGIWP- 494 +FFA+YKVI +++E+RHAP+ GWI+DLAA DP++++ LFG+LP+ PG F+H P Sbjct: 478 IFFALYKVIFVTIELRHAPWIGWIRDLAAPDPSSLWNLFGLLPWAAPGQGSFLHSFTLPV 537 Query: 495 --IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 I++ +SM++Q K++P P D Q MI WMP VF+F L F +GL++YW +N I+I+Q Sbjct: 538 LAILLGVSMWMQQKLNPAPTDPAQKMIFAWMPWVFMFMLGGFASGLVLYWITNNTITIIQ 597 Query: 553 QAVIMKMHGAEIGLIDRLRSTF 574 Q IM MHG +RS+ Sbjct: 598 QYTIMSMHGHRPDFFGNIRSSL 619 >gi|68171979|ref|ZP_00545283.1| 60 kDa inner membrane protein [Ehrlichia chaffeensis str. Sapulpa] gi|67998597|gb|EAM85346.1| 60 kDa inner membrane protein [Ehrlichia chaffeensis str. Sapulpa] Length = 585 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 213/567 (37%), Positives = 341/567 (60%), Gaps = 27/567 (4%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-RKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 N +A+ LSV+I+ W+ ++Y + + N + ++D+++ R++ Sbjct: 12 NLILAVILSVLIMMGWR--FIYDKFFTTQHAIEDNTSSDAMIPEIDDNFIH---KTRSEV 66 Query: 65 LSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 + + R++L N + GSI+LKGAQFDDL + YH+ NS + LLSP T+N YF Sbjct: 67 IESNTNIRIKLSNEKMNGSISLKGAQFDDLIFKNYHVTPDKNSEGIVLLSPEETENVYFI 126 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 E ++ + I +P +++WN L+P PI L + N ++F+ I+LD Y+FKI Sbjct: 127 EFGWIDPQHKITVPTHSSIWNS-DQSTLSPNNPITLTWDNKQGVVFKIKITLDNDYMFKI 185 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD-------KSLVEQKYS 235 VTNN+ I P GRI R K + + EG + G+ K++ ++K Sbjct: 186 EQMVTNNTDSIINLIPYGRINRSKHTAEKSYWISHEGAVGSFGNTLKEWTYKAITKEKNI 245 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIP--SKETSFHSQFKYLS-DGHARYQAKFSAN 292 I++ I++ N W+GI DKYW + IP S++++ + K+ + R+Q FS + Sbjct: 246 KIQQQDIND--NQNQWIGIGDKYWFTALIPNVSQKSNLNFHVKHAKHNSKDRFQVDFSHD 303 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 P ++T+ N+LFAGAKE + Y+ +L I F+ +D+G YFI KP+F+L+ Y Sbjct: 304 NYIAHPNNTVTSINYLFAGAKELKLLDTYKDNLNISLFDKAVDFGVLYFITKPVFLLLEY 363 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F N++GNFG+AI+L T+ +KL+ FPL+ K YVS ++++QP I ++E +K + + Sbjct: 364 FNNVIGNFGLAILLLTIVIKLIMFPLSHKSYVSMLKLRHLQPDIVRIKELYKNDNDK-MS 422 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 K + ++K +N+NP++G P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL++ D N Sbjct: 423 KEISAIFKKNNVNPMSGFVPVLIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLSSFDTAN 482 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVF 529 I T+FG+L F P + +GI P+I+ ++M IQ K+ S DK QA + ++P +F+F Sbjct: 483 ILTIFGLLKFNPP--ICIGILPVILGITMIIQQKLNNHSSLNQDKTQANFMKFLPYIFIF 540 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 SSFPAGLIIYW SN I+IVQQ +I Sbjct: 541 IFSSFPAGLIIYWICSNSITIVQQLII 567 >gi|73666922|ref|YP_302938.1| putative inner membrane protein translocase component YidC [Ehrlichia canis str. Jake] gi|72394063|gb|AAZ68340.1| protein translocase subunit yidC [Ehrlichia canis str. Jake] Length = 579 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 222/573 (38%), Positives = 339/573 (59%), Gaps = 39/573 (6%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPR-------IEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 N +A+ LSV+I+ W+ ++Y + IE+ N I ++D+S+ Sbjct: 6 NLILAVILSVLIMTGWR--FIYDKFFTTQHIIEDNTNSDTMIP------EIDDSFTH--- 54 Query: 59 DDRAQALSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 RA+ + + R+ L N + GSI+LKGAQFDDL + YH+ SNS + LLSP T Sbjct: 55 KTRAEIIGSNTDIRLNLSNKKIHGSISLKGAQFDDLIFKNYHVTPDSNSDGIILLSPEET 114 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 + YF E ++ + I LPN +++WN L+P P L + N I+F+ I+LD Sbjct: 115 EGVYFIEFGWIDPQHKITLPNHSSIWNS-DQPTLSPNNPATLTWDNKEGIIFKIRITLDN 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y+FKI VTNN+ + P GRI R K T + + EG + + +L E Y Sbjct: 174 DYMFKIEQMVTNNTNSIVNLIPYGRINRSKHTTEKSYWISHEGAVGSFSN-TLKEWTYKT 232 Query: 237 IEKS------SISNFHESNSWLGISDKYWASVFIPS----KETSFHSQFKYLSDGHARYQ 286 I K S + N W+GI DKYW + IP+ + +FH + + R+Q Sbjct: 233 ITKEKNIRIQSQDRNDDQNQWIGIGDKYWFTALIPNVLQKSKVNFHVKHAK-HNSEDRFQ 291 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 FS + P K++T+T++LFAGAKE + Y+ +L I F+ +D+G YFI KP+ Sbjct: 292 VDFSHDNYIAHPNKTVTSTSYLFAGAKELKLLDKYKDNLNIALFDKAVDFGVLYFITKPV 351 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F+L+ YFY+ +GNFG+AI+L TV +KL+ FPL+ K YVS +K +QP I +++E K Sbjct: 352 FLLLEYFYDAIGNFGLAILLLTVVIKLIMFPLSYKAYVSMLKLKYLQPDILKIKELHKND 411 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + + K + ++K +N+NP++G PIL+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL+ Sbjct: 412 NDK-MSKEISAIFKKNNVNPMSGFVPILIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLS 470 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWM 523 + D N+ T+FG+L F +P + +GI P+I+ ++M IQ K++ + DK QA + ++ Sbjct: 471 SFDTANVLTMFGLLKFNVP--ICIGILPVILGITMVIQQKLNNSNSLNQDKVQANFMKFL 528 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P +F+F SSFPAGLIIYW SN I+I+QQ +I Sbjct: 529 PYIFIFIFSSFPAGLIIYWICSNSITIIQQLII 561 >gi|296115059|ref|ZP_06833701.1| 60 kDa inner membrane insertion protein [Gluconacetobacter hansenii ATCC 23769] gi|295978396|gb|EFG85132.1| 60 kDa inner membrane insertion protein [Gluconacetobacter hansenii ATCC 23769] Length = 719 Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust. Identities = 200/510 (39%), Positives = 302/510 (59%), Gaps = 17/510 (3%) Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 PR+ + + GSINL+GA+ DDL L+ YH V SP+V +L P + E+ ++ Sbjct: 62 DPRLAINTGRVGGSINLRGARLDDLVLKDYHETVKPGSPLVRILDPRQDPQSNLVEVGWL 121 Query: 128 STANN-IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTV 186 + A + +P++ TVW+ LT P+ L + N +FE +++D++Y+F + V Sbjct: 122 NIAGGQVRVPDATTVWSADQAS-LTQDQPVTLRWDNGQGQVFELVVAIDQNYMFSVTQKV 180 Query: 187 TNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS--- 243 N + + P R+ R T + V EG I+V+ D L E Y + +I Sbjct: 181 HNQAAGPVSLYPYSRVDRAYTPVETGGYLVHEGPISVI-DGRLDESSYKSVRNGTIPPGN 239 Query: 244 ---NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD-GH-ARYQAKFSANEITIL- 297 N + W GI+DKYW + IP +++ + Y+ + GH YQ F+A ++ Sbjct: 240 TSWNKPGTGGWSGITDKYWLTAVIPQQDSLVTGSYGYVPEAGHEGVYQVGFTARTPEVIA 299 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PG T +FAGAKE P + YE L IP F +D+GWF F+ P+F ++ + L+ Sbjct: 300 PGGDGVTETHVFAGAKEVPLLEKYEASLHIPSFWKAVDFGWFAFLTHPIFTVLDWLNTLL 359 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GNFG+A+M T+ VK LFFPLA KQ+ S M+ +QPKI LRE++K L + MI Sbjct: 360 GNFGLALMAFTLVVKGLFFPLATKQFRSMGKMRQLQPKIKALRERYKDD-QMALNQHMIA 418 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NP +GC P+LLQIPVF+ +YKV+ +++EMRHAPF+GWI DL+AADPTNIFTLF Sbjct: 419 LYKEEKVNPASGCLPMLLQIPVFWCLYKVLFVTIEMRHAPFFGWIHDLSAADPTNIFTLF 478 Query: 478 GILPF---YLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSS 533 G++P+ ++ F +G+WPI L+MF Q K++P P AD Q + MP++F F ++ Sbjct: 479 GLIPWDPTHISTFFQLGLWPIAFGLTMFAQQKINPAPAADPAQQKMFQLMPILFTFFMAR 538 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+GL+IY+ W+N++++ QQAVI + AE Sbjct: 539 QPSGLVIYYCWNNLLTMAQQAVIQRRVNAE 568 >gi|189183736|ref|YP_001937521.1| putative inner membrane protein translocase component YidC [Orientia tsutsugamushi str. Ikeda] gi|189180507|dbj|BAG40287.1| 60 kD inner-membrane protein [Orientia tsutsugamushi str. Ikeda] Length = 567 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 217/563 (38%), Positives = 336/563 (59%), Gaps = 11/563 (1%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY---AAVLIDDRA 62 N +AI LS+ I+ W FY PR+ +M+N +K + + + +A+ I D+ Sbjct: 8 NLILAITLSLAIILGWHFFYEKPRLIKMSNAQKEKIEYNKRSSTNKHLLHESALKIKDKV 67 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 + S RV++ L GSI+LKG +FDDL L GY DV NSP V LLSPS T AYFA Sbjct: 68 DIIDYSTRVKIMTNKLHGSISLKGLRFDDLILVGYKQDVLENSPDVELLSPSETATAYFA 127 Query: 123 ELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 E+ + N + + PNS+T+W IL + N +N+ F ++S+D++Y+F Sbjct: 128 EVGWYCAKNADSDFPNSDTLWQ-TDKSILQANDTTTFTWTNKHNVQFIVSVSIDDNYMFT 186 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI-EKS 240 I ++ NNS Q+ G I R+ + N+ + +G IA + D L E Y+ + EK Sbjct: 187 INQSIVNNSKQQLAVQFHGLIHRNLAENE-NSANIFQGPIASI-DSYLNEVTYNKLKEKK 244 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF-SANEITILPG 299 I WLGISDKYW + FIP + + + F Y G +YQ F S E+ G Sbjct: 245 HIDYNLNVVHWLGISDKYWLTSFIPDVKYRYSTSFMYGKAGFEKYQVSFLSPKEVVNSDG 304 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 S++ + LF GAKE + +Y K I F+ ID+GWFY + KP+F +S+FY GN Sbjct: 305 GSLSVVHHLFLGAKEVKLLDYYAKKYNIKLFDRAIDFGWFYILTKPLFYTLSFFYKYCGN 364 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 FG++I++ T+ +K++ F + + Y S M+++QP+I L+E + ++ Q+ M LY Sbjct: 365 FGVSILIVTILIKIMMFSFSNRSYSSMKKMRDLQPRIQRLQELYGDDKIKLHQEIM-ALY 423 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K ++ L+Q+P+FF++YKV+ +++EMRHAPF+ WIKDL+A DPT IF LFG+ Sbjct: 424 KKEKVSLAGSFLQSLIQLPIFFSLYKVLHVTIEMRHAPFFIWIKDLSALDPTCIFNLFGL 483 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAMILNWMPVVFVFALSSFPAGL 538 LPF++P F+++G WPI+ S +M +Q K++ P AD QA +L +MP++ + ++FPAGL Sbjct: 484 LPFHVPWFLNIGAWPILTSATMMLQQKINPAPAADPAQAQVLKFMPLILLIVFNNFPAGL 543 Query: 539 IIYWSWSNVISIVQQAVIMKMHG 561 +IYW+W+N++SIVQQ +I K++ Sbjct: 544 LIYWTWNNILSIVQQFIINKINN 566 >gi|114765427|ref|ZP_01444542.1| putative inner membrane protein translocase component YidC [Pelagibaca bermudensis HTCC2601] gi|114542270|gb|EAU45300.1| putative inner membrane protein translocase component YidC [Roseovarius sp. HTCC2601] Length = 611 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 217/605 (35%), Positives = 338/605 (55%), Gaps = 35/605 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN---IQTVKQPNQVDNSYAAVLI 58 ++N N +A LS +++ W F ++P EE ++ ++TV+ S A Sbjct: 3 DQNKNLLIATGLSFVVILVW--FLLFPPPEEQLQDQAGPNAVETVEGDTATTPSAAPSAT 60 Query: 59 ---DDRAQALSMS-----PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 D A A + + PRV + L GSI+L G + D+L L+ Y + + +SP V + Sbjct: 61 TGGGDTAAAPAQAETVDAPRVAIDTDRLGGSISLTGGRIDELILKDYTVTLDEDSPNVQI 120 Query: 111 LSPSNTKNAYFAELDYV--STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L P N Y+A + S ++P +NT W L SG L+ +P+ L + + ++F Sbjct: 121 LEPVGGGNPYYALYGWAPGSGLGLDDVPGANTAWELESGDSLSVDSPVTLRWDSPAGLVF 180 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDK 227 RTIS+DE ++F + +V N + +P G I RH +P N F + EG +A+ D Sbjct: 181 RRTISIDEDFMFSVTQSVENAGEGTVSAAPYGIIARHGEPADLKNFFVLHEGVVAI-ADG 239 Query: 228 SLVEQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYL 278 L E YSD+ ++ + N W+G +D YW + IP + F KY Sbjct: 240 KLSEIGYSDMPDMDVNQSEGARAEVTQVTENGWIGFTDHYWMTTLIPQQGAPFKQAAKY- 298 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + YQ + +T+ PG++ T LFAGAKE+ TI YE D + RF IDWGW Sbjct: 299 DERRDIYQTEAVLPTMTLAPGETQEVTTQLFAGAKEYETIRDYE-DAGVVRFIDSIDWGW 357 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+F+ KP+F ++ + L+GN G +I+ T+ +K + FPLA K YVS A MK +QP++++ Sbjct: 358 FFFLTKPIFWMLHQIHLLIGNMGWSIIGLTLIIKAILFPLAYKSYVSMAKMKELQPEMEK 417 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+EK Q LQ+ M+ LYK +NP +GC PILLQIP+FF++YKVI ++ E+RHAP+ Sbjct: 418 LKEKAGDDR-QKLQQEMMALYKKEKVNPASGCLPILLQIPIFFSLYKVIFVAFELRHAPW 476 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +G +DL+ DPT++F LFG+LP+ P + +GI P+++ +SM++Q K++P PA Sbjct: 477 FGPFQDLSTPDPTSLFNLFGLLPWAAPAPGTTLALVFIGILPLLLGISMWLQQKLNPAPA 536 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D Q MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + + + S Sbjct: 537 DPTQKMIFAWMPWVFMFMLGGFASGLVVYWITNNTITFTQQYLIMRSQGYKPDVFGNIVS 596 Query: 573 TFSKN 577 F + Sbjct: 597 GFKRK 601 >gi|254450534|ref|ZP_05063971.1| 60 kD inner-membrane protein [Octadecabacter antarcticus 238] gi|198264940|gb|EDY89210.1| 60 kD inner-membrane protein [Octadecabacter antarcticus 238] Length = 593 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 211/582 (36%), Positives = 331/582 (56%), Gaps = 31/582 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT--------VKQPNQVDNSY 53 ++N N +A ALS I++ W + P + E + T + P QV Sbjct: 3 DQNKNIILATALSFIVILTWFVLFPPPEVAEQAPTTEITTTDGTTLGVDAQIPEQVGE-- 60 Query: 54 AAVLIDDRAQ-ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 AVL A+ ++ +PR+ + + SL GS++L G + DDL+L+GY + ++ +V LLS Sbjct: 61 VAVLAPLSAEDVIADAPRLVIDSESLTGSLSLTGGRIDDLSLKGYRETLKPDADLVRLLS 120 Query: 113 PSNTKNAYFAELDYVST--ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 P T + Y+A +V+ A ++P ++T W + SG+ L+P + + LV+ N + F + Sbjct: 121 PIGTDSPYYALHGWVAAVGATADQVPGASTQWQIESGETLSPGSDVTLVWGNGAGLTFRK 180 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 T ++DE +LF + TV N + +I P G + RH F EG + + D S+ Sbjct: 181 TFAVDEEFLFTVTQTVENTTGAEIALRPYGLVARHGEPDQIGFFIQHEGVVR-MSDGSME 239 Query: 231 EQKYSDI-----EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 E Y D+ E+S I N W+G SD+YW + IP+ F S K+ +D Y Sbjct: 240 EINYDDMPDLTTEESRIE--VTENGWIGFSDQYWMTALIPTPGRDFRSTAKFAND---IY 294 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 Q + IT+ PG + + FAGA+E+ I Y+ DL I RF IDWGWF+F+ KP Sbjct: 295 QIETVYPMITVAPGATASADTQFFAGAQEWEVIRSYQNDLGIDRFLDSIDWGWFFFLTKP 354 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F ++ + L+GN G +I+ T +K L PLA K YVS A M+ +QP++ +L+E Sbjct: 355 IFAMLHWLNGLIGNMGWSIICLTFVIKALLLPLAYKSYVSMAKMRELQPEMAKLKEAAGD 414 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + LQK M+ LYK + +NP +GC PIL+QIP+FF++YKVI +++E+RHAP+ GW+ DL Sbjct: 415 D-REKLQKGMMSLYKENKVNPASGCLPILMQIPIFFSLYKVIFVTIELRHAPWIGWVNDL 473 Query: 466 AAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 +A D + ++ LFG+LP+ P +G+ PI++ +SM++Q K++P P D Q MI Sbjct: 474 SAPDTSTLYNLFGLLPWGAPEPDSILALAFIGVMPIVLGISMWLQQKLNPAPTDATQKMI 533 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 WMP VF+F L F +GL++YW +N I+ +QQ IM+ G Sbjct: 534 FAWMPWVFMFMLGGFASGLVLYWIANNSITFMQQYAIMRSQG 575 >gi|57239041|ref|YP_180177.1| putative inner membrane protein translocase component YidC [Ehrlichia ruminantium str. Welgevonden] gi|57161120|emb|CAH58031.1| putative integral membrane protein [Ehrlichia ruminantium str. Welgevonden] Length = 575 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 225/586 (38%), Positives = 344/586 (58%), Gaps = 45/586 (7%) Query: 6 NYFVAIALSVIIVYAW----QNFYVYPRIEE------MNNERKNIQTVKQPNQVDNSYAA 55 N A+ LSV+I+ W + F+ + E M E N+ T + N+ Sbjct: 6 NLVFAVVLSVLIMMGWRLVYEKFFTVQHVVEDEDSSSMIPEIDNVLTYRSRNE------- 58 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 I D Q L RV+L N + GSI+LKGAQ DDL + YH+ S+S + LLSP N Sbjct: 59 --IIDSTQNL----RVKLSNKEINGSISLKGAQLDDLVFKNYHITPDSSSDGIILLSPEN 112 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 T+ YF E ++ + I +PN + W +L+P + L + N ++F+ ++LD Sbjct: 113 TEGVYFIEFGWIDPQHKIVVPNQLSTWTS-DKSVLSPNNTVTLTWDNQQGVIFQIKVTLD 171 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++Y+FKI + NN+ + + P GRI R + T + + EG + G +L E Y Sbjct: 172 DYYMFKIEQIIINNTDNVVNLIPYGRINRARHTTEKSYWISHEGAVGSFG-YTLKEWTYK 230 Query: 236 DIEKS---SISNFH-ESNSWLGISDKYWASVFIPS-----KETSFHSQF-KYLSDGHARY 285 +I K IS + + N W+GI+DKYW + IP+ + SFH + KY + R+ Sbjct: 231 NIIKERNIKISQQNTDDNQWVGIADKYWFTALIPNILQKKSKLSFHVKHGKY--NNEDRF 288 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 Q FS + + P K+ ++T++LFAGAKE + Y+KDL I F+ +D+G YFI KP Sbjct: 289 QVDFSHDSYSAYPNKTASSTSYLFAGAKELKLLDKYKKDLNISLFDKAVDFGILYFITKP 348 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F+L+ YFY+L+GNFG+AI+L T+ +KL+ FPL+ K YVS +K +QP+I +++E +K Sbjct: 349 VFLLLEYFYDLIGNFGLAILLLTIVIKLIMFPLSYKSYVSMFKLKYLQPEILKIKELYKN 408 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + + K + L+K ++++P++G PIL+QIPVFFA+YKV+ +++EMRHAPF+ W+KDL Sbjct: 409 DNTK-MSKEVSLLFKKNDVSPMSGFIPILIQIPVFFALYKVLFVTIEMRHAPFYLWVKDL 467 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-----SPPPADKGQAMIL 520 + D N+ TLFG+L F P + +GI P+I+ ++M IQ KM S DK QA + Sbjct: 468 SNFDTANVLTLFGLLNFNPP--ICIGILPVILGITMIIQQKMNTSTHSSQDQDKIQASFI 525 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 ++P VF+F SSFP GLIIYW SN I+I+QQ +I G + L Sbjct: 526 KFLPYVFIFIFSSFPTGLIIYWICSNSITIIQQLIIKAYIGRKFNL 571 >gi|254488170|ref|ZP_05101375.1| 60 kD inner-membrane protein [Roseobacter sp. GAI101] gi|214045039|gb|EEB85677.1| 60 kD inner-membrane protein [Roseobacter sp. GAI101] Length = 616 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 214/597 (35%), Positives = 336/597 (56%), Gaps = 34/597 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI--- 58 ++N N +A LS I++ W F ++P E + P V AAV Sbjct: 3 DQNKNLIIATVLSFIVILGW--FLLFPPPEPNTPLDGTEISATAPTDVTTPDAAVPAGTA 60 Query: 59 ---------DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + RA +L +PRV ++ L GSI+L G + DDL L+ Y + ++PIVT Sbjct: 61 LPATTADPEETRADSLEQAPRVPVETSRLTGSISLLGGRIDDLRLKDYRTTIEDDAPIVT 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 LLSP+ T +AY+A + + A ++P NT+W+L SG L+ +P+ + + N + Sbjct: 121 LLSPAGTDDAYYALYGWAAGAGIAPEQVPGPNTLWSLASGDTLSVGSPVTMTWDNGAGQV 180 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGD 226 F R IS+DE+++F++ +V N S + +P G I RH P A N F + EG +A + + Sbjct: 181 FSRVISVDENFMFEVEQSVQNTSETSVTLAPYGIIARHGIPTDAQNFFILHEGMVA-MNN 239 Query: 227 KSLVEQKYSDI-EKSSISNFHE------SNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 L+E + DI + + +N W+G + Y+ + IP KYL Sbjct: 240 GELIETGWEDIPDLDPVGGVPSKRIDGVTNGWIGFTGHYFMTNLIPDPAQQSRLTAKYLP 299 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 +Q + I G S + + LFAGAKE+ + YE + +F IDWGWF Sbjct: 300 RTDI-FQTEAVLPTQVIAAGSSASVSTQLFAGAKEWEALRDYEA-AGVYKFVDSIDWGWF 357 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +F+ KP+F ++ + L+GN G+AI+ T+ +K L FPLA K YVS A MK +QP++++L Sbjct: 358 FFLTKPIFWVLHHLNILIGNMGVAIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMEKL 417 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 ++ Q LQ+ M++LYK +NP AGC PI++QIP+FF++YKVI ++LE+RHAPF+ Sbjct: 418 KKDAGDDR-QKLQQGMMELYKREKVNPAAGCLPIIMQIPIFFSLYKVIFVTLELRHAPFF 476 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 G +DL+A DPT+IF +G+LP+ +P + +GI P+++ +SMF+Q K++P P D Sbjct: 477 GPFQDLSAPDPTSIFNFYGLLPWGVPEAGSVMALIFIGILPLLLGISMFLQQKLNPAPTD 536 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 Q MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + L+ + Sbjct: 537 PTQQMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDLLGNI 593 >gi|162147919|ref|YP_001602380.1| inner membrane protein oxaA [Gluconacetobacter diazotrophicus PAl 5] gi|161786496|emb|CAP56078.1| putative inner membrane protein oxaA [Gluconacetobacter diazotrophicus PAl 5] Length = 572 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 199/540 (36%), Positives = 315/540 (58%), Gaps = 21/540 (3%) Query: 37 RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSP------RVELKNPSLIGSINLKGAQFD 90 ++ QT +Q D + A + + +P R+ + P + GSI+L GA+ D Sbjct: 17 QQAAQTSRQTPPTDAARAPAPVAGASSQPVSTPAPQAETRLAIDAPKVAGSIDLLGARLD 76 Query: 91 DLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKI 149 D+ LR YH V+ SP V +L P + + + E+ +++ + +P++ TVW+ + K Sbjct: 77 DMVLRDYHETVAKGSPQVRILEPGHDQQPNYVEIGWMNLPGGQVRVPDATTVWSADAPK- 135 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209 LT P+ L + N + F+ +S+D HY+F I + N S + P R+ R T Sbjct: 136 LTSDRPVTLSWDNGAGVTFQIVVSIDAHYMFGIEQRIVNRSAQPVSLYPYARVDRAYTPT 195 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES------NSWLGISDKYWASVF 263 T + V EG I+V+ D L E Y + + + S W GI+DKYW + Sbjct: 196 ETGGYLVHEGPISVI-DGRLDESSYKSLRTGATPPGNLSWTKGGQGGWAGITDKYWLTAV 254 Query: 264 IPSKETSFHSQFKYLSDGHAR-YQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHY 321 IP + T+ + Y ++G A YQ F A T++ PG + T + +FAGAKE + Y Sbjct: 255 IPQQGTAVTGSYGYQANGGAGVYQVGFIAQAATVVAPGTTGATVSHVFAGAKEVNLLEQY 314 Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 + L IP F +D+GWF F+ +P+F ++ + L+GNFG+A+M T+ VK LFFPLA + Sbjct: 315 QSSLHIPDFWKAVDFGWFAFLTRPIFYVLDWLNTLLGNFGLALMAFTLLVKALFFPLATR 374 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Q+ S A M+ +QPK+ ELRE++K S L + M+ LYK +NP AGC P+++QIPVF+ Sbjct: 375 QFRSMAKMRQLQPKVQELRERYK-SDQMALNQNMMALYKAEGVNPAAGCLPMVVQIPVFW 433 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF---YLPGFMHVGIWPIIMS 498 ++YK + I++EMRHAPF+GWI DL+A D TN+F LFG++P+ L ++ +G+WPI+ Sbjct: 434 SLYKDLYITIEMRHAPFFGWIHDLSAPDLTNLFNLFGLIPWDPNVLSPYLQLGVWPILFG 493 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MF+Q K++P P D Q + MPV+F F ++ PAGL+IY+ W+N++++ QQ VI + Sbjct: 494 ATMFLQQKLNPAPTDPAQQRMFQMMPVLFTFFMARQPAGLVIYYCWNNLLTVAQQMVIQR 553 >gi|58578983|ref|YP_197195.1| putative inner membrane protein translocase component YidC [Ehrlichia ruminantium str. Welgevonden] gi|58417609|emb|CAI26813.1| 60 kD inner-membrane protein [Ehrlichia ruminantium str. Welgevonden] Length = 575 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 225/586 (38%), Positives = 343/586 (58%), Gaps = 45/586 (7%) Query: 6 NYFVAIALSVIIVYAW----QNFYVYPRIEE------MNNERKNIQTVKQPNQVDNSYAA 55 N A+ LSV+I+ W + F+ + E M E N+ T + N+ Sbjct: 6 NLVFAVVLSVLIMMGWRLVYEKFFTVQHVVEDEDSSSMIPEIDNVLTYRSRNE------- 58 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 I D Q L RV+L N + GSI LKGAQ DDL + YH+ S+S + LLSP N Sbjct: 59 --IIDSTQNL----RVKLSNKEINGSILLKGAQLDDLVFKNYHITPDSSSDGIILLSPEN 112 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 T+ YF E ++ + I +PN + W +L+P + L + N ++F+ ++LD Sbjct: 113 TEGVYFIEFGWIDPQHKIVVPNQLSTWTS-DKSVLSPNNTVTLTWDNQQGVIFQIKVTLD 171 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++Y+FKI + NN+ + + P GRI R + T + + EG + G +L E Y Sbjct: 172 DYYMFKIEQIIINNTDNVVNLIPYGRINRARHTTEKSYWISHEGAVGSFG-YTLKEWTYK 230 Query: 236 DIEKS---SISNFH-ESNSWLGISDKYWASVFIPS-----KETSFHSQF-KYLSDGHARY 285 +I K IS + + N W+GI+DKYW + IP+ + SFH + KY + R+ Sbjct: 231 NIIKERNIKISQQNTDDNQWVGIADKYWFTALIPNILQKKSKLSFHVKHGKY--NNEDRF 288 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 Q FS + + P K+ ++T++LFAGAKE + Y+KDL I F+ +D+G YFI KP Sbjct: 289 QVDFSHDSYSAYPNKTASSTSYLFAGAKELKLLDKYKKDLNISLFDKAVDFGILYFITKP 348 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F+L+ YFY+L+GNFG+AI+L T+ +KL+ FPL+ K YVS +K +QP+I +++E +K Sbjct: 349 VFLLLEYFYDLIGNFGLAILLLTIVIKLIMFPLSYKSYVSMFKLKYLQPEILKIKELYKN 408 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + + K + L+K ++++P++G PIL+QIPVFFA+YKV+ +++EMRHAPF+ W+KDL Sbjct: 409 DNTK-MSKEVSLLFKKNDVSPMSGFIPILIQIPVFFALYKVLFVTIEMRHAPFYLWVKDL 467 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-----SPPPADKGQAMIL 520 + D N+ TLFG+L F P + +GI P+I+ ++M IQ KM S DK QA + Sbjct: 468 SNFDTANVLTLFGLLNFNPP--ICIGILPVILGITMIIQQKMNTSTHSSQDQDKIQASFI 525 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 ++P VF+F SSFP GLIIYW SN I+I+QQ +I G + L Sbjct: 526 KFLPYVFIFIFSSFPTGLIIYWICSNSITIIQQLIIKAYIGRKFNL 571 >gi|58617041|ref|YP_196240.1| putative inner membrane protein translocase component YidC [Ehrlichia ruminantium str. Gardel] gi|58416653|emb|CAI27766.1| 60 kD inner-membrane protein [Ehrlichia ruminantium str. Gardel] Length = 575 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 224/586 (38%), Positives = 344/586 (58%), Gaps = 45/586 (7%) Query: 6 NYFVAIALSVIIVYAW----QNFYVYPRIEE------MNNERKNIQTVKQPNQVDNSYAA 55 N A+ LSV+I+ W + F+ + E M E N+ T + N+ Sbjct: 6 NLVFAVVLSVLIMMGWRLVYEKFFTVQHVVEDEDSSSMIPEIDNVLTYRSRNE------- 58 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 I D Q L RV+L N + GSI+LKGAQ DDL + YH+ ++S + LLSP N Sbjct: 59 --IIDSTQNL----RVKLSNKEINGSISLKGAQLDDLVFKNYHITPDNSSDGIILLSPEN 112 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 T+ YF E ++ + I +PN + W +L+P + L + N ++F+ ++LD Sbjct: 113 TEGVYFIEFGWIDPQHKIVVPNQLSTWTS-DKSVLSPNNTVTLTWNNQQGVIFQIKVTLD 171 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++Y+FKI + NN+ + + P GRI R + T + + EG + G +L E Y Sbjct: 172 DYYMFKIEQIIINNTDNVVNLIPYGRINRARHTTEKSYWISHEGAVGSFG-YTLKEWTYK 230 Query: 236 DIEKS---SISNFH-ESNSWLGISDKYWASVFIPS-----KETSFHSQF-KYLSDGHARY 285 +I K IS + + N W+GI+DKYW + IP+ + SFH + KY + R+ Sbjct: 231 NIIKERNIKISQQNTDDNQWVGIADKYWFTALIPNILQKKSKLSFHVKHGKY--NNEDRF 288 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 Q FS + + P K+ ++T++LFAGAKE + Y+KDL I F+ +D+G YFI KP Sbjct: 289 QVDFSHDSYSAYPNKTASSTSYLFAGAKELKLLDKYKKDLNISLFDKAVDFGILYFITKP 348 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F+L+ YFY+L+GNFG+AI+L T+ +KL+ FPL+ K YVS +K +QP+I +++E +K Sbjct: 349 VFLLLEYFYDLIGNFGLAILLLTIVIKLIMFPLSYKSYVSMFKLKYLQPEILKIKELYKN 408 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + + K + L+K ++++P++G PIL+QIPVFFA+YKV+ +++EMRHAPF+ W+KDL Sbjct: 409 DNTK-MSKEVSLLFKKNDVSPMSGFIPILIQIPVFFALYKVLFVTIEMRHAPFYLWVKDL 467 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-----SPPPADKGQAMIL 520 + D N+ TLFG+L F P + +GI P+I+ ++M IQ KM S DK QA + Sbjct: 468 SNFDTANVLTLFGLLNFNPP--ICIGILPVILGITMIIQQKMNTSTHSSQDQDKIQASFI 525 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 ++P VF+F SSFP GLIIYW SN I+I+QQ +I G + L Sbjct: 526 KFLPYVFIFIFSSFPTGLIIYWICSNSITIIQQLIIKAYIGRKFNL 571 >gi|254439216|ref|ZP_05052710.1| 60Kd inner membrane protein [Octadecabacter antarcticus 307] gi|198254662|gb|EDY78976.1| 60Kd inner membrane protein [Octadecabacter antarcticus 307] Length = 590 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 205/575 (35%), Positives = 327/575 (56%), Gaps = 20/575 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEE----MNNERKNIQTVKQPNQVDNSYAAVL 57 ++N N +A ALS I++ W + P + E + T+ QV A + Sbjct: 3 DQNKNLILATALSFIVILIWFVLFPPPDVTEPAPTAEVTSTDGTTLGVDAQVPTQVAVLP 62 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A++ +PR+ + + +L GS++L G + DDL+L+ Y + + S++ +V LLSP T+ Sbjct: 63 PLSAEDAIADAPRIMIDSENLTGSLSLTGGRIDDLSLKDYRVTLDSDADLVRLLSPIGTE 122 Query: 118 NAYFAELDYVST--ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 Y+A +V+ A ++P ++T W L SG L P + I L++ N + F +T ++D Sbjct: 123 APYYALNGWVAAVGATADQVPGASTQWQLESGDTLEPGSDITLIWDNGAGLTFRKTFAVD 182 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 E++LF + TV N++ +I P G + RH F EG + + D S+ E Y Sbjct: 183 ENFLFTVTQTVENSTGAEIALRPYGLVARHGEPDQIGFFIQHEGVVR-MSDGSMEEINYG 241 Query: 236 DIEKSSISNFH---ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 D+ + E N W+G SD+YW + IP+ F S K+ ++ YQ + Sbjct: 242 DMPDLTSDEGRIEVEENGWIGFSDQYWMTALIPTPGRDFRSTAKFANN---IYQIETVYP 298 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 T+ G + + FAGA+E+ I Y+ DL I RF IDWGWF+F+ KP+F ++ + Sbjct: 299 LTTVASGATASAETQFFAGAQEWVVIRSYQDDLGIDRFLDSIDWGWFFFLTKPIFAVLHW 358 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 L+GN G +I+ T +K L PLA K YVS A M+ +QP++ +L+E + LQ Sbjct: 359 LNGLIGNMGWSIICLTFVIKALLLPLAYKSYVSMAKMRELQPEMAKLKEAAGDDR-EKLQ 417 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 K M+ LYK + +NP +GC PIL+QIP+FF++YKVI +++E+RHAP+ GWI DL+A D + Sbjct: 418 KGMMSLYKENKVNPASGCLPILMQIPIFFSLYKVIFVTIELRHAPWIGWINDLSAPDTST 477 Query: 473 IFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 ++ LFG+LP+ P + +G+ PI++ +SM++Q K++P P D Q MI WMP V Sbjct: 478 LYNLFGLLPWGAPAPDSILALVFIGVMPIVLGISMWLQQKLNPAPTDPTQKMIFAWMPWV 537 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F+F L SF +GL++YW +N I+ +QQ IM+ G Sbjct: 538 FMFMLGSFASGLVLYWIANNTITFMQQYAIMRSQG 572 >gi|56695446|ref|YP_165794.1| putative inner membrane protein translocase component YidC [Ruegeria pomeroyi DSS-3] gi|81676422|sp|Q5LW11|OXAA_SILPO RecName: Full=Inner membrane protein oxaA gi|56677183|gb|AAV93849.1| inner membrane protein YidC, putative [Ruegeria pomeroyi DSS-3] Length = 609 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 218/611 (35%), Positives = 350/611 (57%), Gaps = 39/611 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT-----VKQPNQVDNSYAAV 56 ++N N +A ALS +++ W F ++P E+ I T V+ P A Sbjct: 3 DQNKNLILATALSFLVILVW--FILFPPPEQTEAPATEIATTNGTAVQTPTAAATEGGAG 60 Query: 57 ---LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 +D A + +PRV++ P L GS++L G + D+L+L+ Y + + ++ IV +L+P Sbjct: 61 EVPALDSAAPTQAEAPRVQIDTPRLKGSVSLLGGRIDELSLKDYRVSLDEDAEIVEMLTP 120 Query: 114 SNTKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + + +AY+A + A N ++P T W+L SG L+ TP+ L + N + + F RT Sbjct: 121 AGSTSAYYALYGWAPGAGLNAADVPGPLTEWSLESGDTLSVGTPVTLSWSNGSGVTFRRT 180 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ------EGFIAVLG 225 +++DE Y+F + +V N S I +P G + RH + G++ EG +A + Sbjct: 181 LAVDEDYMFTVTQSVENGSAAPIGAAPYGILARHGIGEDADLPGLKNFFILHEGVVA-MN 239 Query: 226 DKSLVEQKYSDIEKSSISN---------FHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 D +L E Y D+ K I ++S+ W+G +D YW + IP T+F S K Sbjct: 240 DGTLSEIDYKDVRKFDIDPNEGAQAEVFQNKSDGWIGFTDHYWMATLIPGSGTAFKSAAK 299 Query: 277 YLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 Y D + YQA+ +++ PG+S T LFAGAKE+ +I Y++D + +F ID Sbjct: 300 Y--DARRKIYQAETVLPTMSVAPGESAEVTTRLFAGAKEWESIRAYQQD-GVQKFLDSID 356 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWF+F+ KP+F L+ L+GN G +I+ T+ +K + FPLA K YVS A MK +QP+ Sbjct: 357 WGWFFFLTKPIFWLLHQINGLIGNMGWSIIGLTLIIKAIVFPLALKSYVSMAKMKELQPQ 416 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 ++ L+E Q +Q+ M++LYK +NP AGC PILLQIP+FF++YKVI +++E+R Sbjct: 417 MEALKEAAGDDR-QKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRQ 475 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSP 509 AP++G +DL+ DPT+I FG LP+ P + +GI P+++ +SM++Q K++P Sbjct: 476 APWFGPFRDLSMPDPTSIMNFFGWLPWAGPEAGSLTATILIGILPLLLGISMWLQQKLNP 535 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D QAMI WMP VF+F L SF +GL++YW +N I+ QQ +IM+ HG + + Sbjct: 536 APTDPTQAMIFAWMPWVFMFMLGSFASGLVVYWIANNTITFTQQYIIMRSHGYKPDVFGN 595 Query: 570 LRSTFSKNYNS 580 ++S F++ + Sbjct: 596 IKSGFARRAKA 606 >gi|304322173|ref|YP_003855816.1| 60 kDa inner membrane insertion protein [Parvularcula bermudensis HTCC2503] gi|303301075|gb|ADM10674.1| 60 kDa inner membrane insertion protein [Parvularcula bermudensis HTCC2503] Length = 589 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 200/591 (33%), Positives = 337/591 (57%), Gaps = 26/591 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID- 59 M+RN +A+ LS ++++ ++ + P+ ++ Q + Q+D + A Sbjct: 1 MDRN--VIIALVLSTLLLFGYEALVLGPKRAAYLEAQEKAQAIAA-EQMDPADAGETFLP 57 Query: 60 ------DRAQALSM-SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 R QAL+ + R+ ++ P+L GS+NL+G FDDL L+ Y ++++SP + LLS Sbjct: 58 GTERSLSREQALAEGTARLPIETPTLSGSVNLEGLLFDDLILKTYRATLAADSPPIVLLS 117 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 P F +S + + W G +LTP TP+ +V + +I + T+ Sbjct: 118 PRTATTPQFMRAG-LSIGG---VSDRTARWQAPEGAVLTPKTPV-IVTRQEGDIQYRATL 172 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRI-MRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 ++DE ++F++ VTN S + + P G R P N + EG I V+ D L++ Sbjct: 173 AVDEQFMFRVTYEVTNGSGETVVAQPYGAAYQRGIPADLQNFMILFEGPIGVV-DHRLMD 231 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 +KY + S W+GI+DKYW S IP ++T F ++ ++A + Sbjct: 232 RKYKKLLSGGGIEDRGSGGWVGITDKYWLSAAIPPQDTPFKAELDVTDGAIPLFRASYLL 291 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 +I PG +I T +L+ G+KE + Y+ L I RF +DWG F F+ +P+F +++ Sbjct: 292 ETQSIAPGATIRTEAYLYGGSKEVEVLRMYQDQLGIDRFVWAVDWGHFSFLTRPIFGILA 351 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 +F L GN+G+AI+L T+ +K + FPLA Y S A MK +QP++ ++RE++ + Sbjct: 352 FFEGLTGNWGVAILLLTLVIKAVLFPLANMSYKSMAGMKKVQPELMKIRERYTDDKTKQ- 410 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ M+ LYK H INP AGC P+L Q+P+F+A+YK + +++E+RH PF +I DL+ DPT Sbjct: 411 QQEMMALYKKHKINPAAGCLPVLAQMPIFYALYKTLFVTIELRHEPFL-YIPDLSEQDPT 469 Query: 472 NIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 ++F LFG+LPF + F+ +GI P++M +MF+Q+K++PPP D Q MI MP+ Sbjct: 470 SVFNLFGLLPFDPTTVPLIGSFLGIGILPLLMGAAMFVQLKLNPPPPDPTQRMIFGLMPL 529 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +F+F + F AGL++YW W+ +S++QQ +IMK GA++ ++ ++ +F K Sbjct: 530 IFMFIFAPFAAGLVLYWFWNTFLSVIQQYIIMKRQGADVDILGNIKQSFGK 580 >gi|163745583|ref|ZP_02152943.1| putative inner membrane protein translocase component YidC [Oceanibulbus indolifex HEL-45] gi|161382401|gb|EDQ06810.1| putative inner membrane protein translocase component YidC [Oceanibulbus indolifex HEL-45] Length = 623 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 213/610 (34%), Positives = 340/610 (55%), Gaps = 42/610 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIE---------EMNNERKNIQTVKQPNQV--- 49 E+N N +A ALS ++ W F ++P E EM+ P Sbjct: 3 EQNKNLILATALSFAVILVW--FLLFPPPEADPALENSVEMSQAEDGTSVPASPADTAAA 60 Query: 50 ---DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 DN A RA AL+ +PRV + + GSI+L G + DDL L Y + N+ Sbjct: 61 PGTDNGEGAAPQGRRA-ALADAPRVAIATDKVSGSISLMGGRIDDLKLNDYQTTLDENAE 119 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +VTLLSP + +AY+A + + + +P +T+W L G+ L +P+ L + N Sbjct: 120 VVTLLSPEGSSDAYYALHGWAAGSGLAPDAVPGVDTLWTLSEGETLGVDSPVTLSWDNGA 179 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAV 223 +F RTIS+D Y+F I +VTNN + +P G I +H P+ + F + EG ++ Sbjct: 180 GQIFNRTISVDNEYMFDITQSVTNNGDAPVNLAPFGMIAQHGLPEDLKSFFILHEGAVS- 238 Query: 224 LGDKSLVEQKYSDIEKSSISNF---------HESNSWLGISDKYWASVFIPSKETSFHSQ 274 + + L E + DI ++ +++ + W+G +D YW +V IP +F Sbjct: 239 MANGELSEIDWDDIAEADVNSTWGRPAVVTEGVTEGWVGFTDHYWQAVLIPGAGEAFEQA 298 Query: 275 FKYLSDGHA-RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 Y D A Y+A ++ G+S+++++ FAGAKE+ T+ Y+ + +F Sbjct: 299 LTY--DPRADTYRAFTRQPTRSVAAGESVSSSSKFFAGAKEWETLQDYQS-AGVAKFIDS 355 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 IDWGWF+F+ KP+F L+ L+GN G+AI+ T+ +K L FPLA K YVS A MK +Q Sbjct: 356 IDWGWFFFLTKPIFWLLHNLNQLIGNMGVAIIGLTLLIKALLFPLAYKSYVSMARMKELQ 415 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++++L+++ Q +Q+ M++LYK + +NP AGC PIL+QIP+FF++YKVI +++E+ Sbjct: 416 PEMEKLKKEAGDDR-QKMQQGMMELYKKNKVNPAAGCLPILMQIPIFFSLYKVIFVTIEL 474 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKM 507 RHAPF+G +DL++ DPT+I L+G+LP+ P + +GI P+++ +SMF+Q K+ Sbjct: 475 RHAPFFGPFQDLSSPDPTSIMNLWGLLPYAAPEPGSMLALVFIGILPLLLGISMFLQQKL 534 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 +P P D Q MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + L Sbjct: 535 NPAPTDPTQQMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDLW 594 Query: 568 DRLRSTFSKN 577 + F + Sbjct: 595 GNIAGGFKRT 604 >gi|329848429|ref|ZP_08263457.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain-containing protein [Asticcacaulis biprosthecum C19] gi|328843492|gb|EGF93061.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain-containing protein [Asticcacaulis biprosthecum C19] Length = 624 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 216/595 (36%), Positives = 330/595 (55%), Gaps = 45/595 (7%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY------AAV 56 RN YF + S+++++ +Q F P+ ++ +R + A Sbjct: 9 RNMIYF--LIASMVLLFGYQYFVTGPQQKKAQEQRAVAAAQASASSSSAVAAGLPVTGAA 66 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + R QA++ +PRV++ PSL GS++LKGA DDL L+ Y + SP V LL P+ + Sbjct: 67 AVMTREQAIAAAPRVKIDTPSLRGSLSLKGALVDDLYLKSYKETTKAGSPDVELLRPAGS 126 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 AY+ + Y+ N LP++NT+WNL SG +L+P P+ L N ++F RT+S+D+ Sbjct: 127 DRAYYVQSGYIGQ-NIPGLPDANTMWNLQSGNVLSPGKPVVLTHDNGAGLMFTRTLSIDD 185 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVEQ--- 232 +Y+ + + V N + FSP ++R P T V EG IA +K + Sbjct: 186 NYMITVAEAVANTGAGPVAFSPYSTVIRFDMPAGLDRTGVVHEGAIATFPNKIEAGKIDR 245 Query: 233 ------KYSDI----EKSSISNFHESNSWLGISDKYWASVFIPSKE--TSFHSQFKYLSD 280 KY D+ EK + W G++DKYW + IP+++ F +Q + + Sbjct: 246 YKTQSLKYKDMAKEPEKKVFKDVASVGGWFGLTDKYWMAAVIPAQDQPVRFTTQAN-VQN 304 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y+A + +T+ PG++ + + +FAGAK + YE DL IPRF DWG Sbjct: 305 NKPIYRAGYLDETVTVAPGQTWQSQSHIFAGAKLNSQLQAYENDLKIPRFGYATDWGSLQ 364 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----PKI 396 F+ PM+ L+ Y +GNFG AI+ TV VK++F+PLA K Y S MK +Q PK+ Sbjct: 365 FLTYPMYWLLDKLYGFLGNFGFAILALTVIVKIVFYPLAHKAYESMTKMKQVQDRLKPKL 424 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKVISISLEM 453 D ++ +F PQ Q+A ++LY+ +NP+A GC P+LLQIPVF+A+YKV+ +++EM Sbjct: 425 DAIKSRFPDD-PQKQQEATMKLYQDEKVNPMAGLGGCLPMLLQIPVFWALYKVLILAIEM 483 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPF----------YLPGFMHVGIWPIIMSLSMFI 503 RHAPF+GWIKDL+A DPT+ LFG+LPF L G +H+G+ I+ LSM++ Sbjct: 484 RHAPFFGWIKDLSAPDPTSFVNLFGLLPFEPATVPLIGGILAGPLHLGVVAILYGLSMWL 543 Query: 504 QMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +M+P D Q +L +MPV+ F ++ GLIIYW WSN+++I QQ IM Sbjct: 544 SQQMTPTANVDPMQKKMLAFMPVILTFFMAQVAVGLIIYWIWSNILTIFQQWTIM 598 >gi|149913108|ref|ZP_01901642.1| 60 kDa inner membrane insertion protein [Roseobacter sp. AzwK-3b] gi|149813514|gb|EDM73340.1| 60 kDa inner membrane insertion protein [Roseobacter sp. AzwK-3b] Length = 604 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 228/614 (37%), Positives = 347/614 (56%), Gaps = 48/614 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 ++N N +A ALS +++ W F ++P E +++ T + +QVD S A L Sbjct: 3 DQNKNLILATALSFVVILVW--FVLFPPPEP---PQQDATTPEAASQVDGSATAPLTATA 57 Query: 62 AQALSMSP------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + + RV + PSL GSI+LKG + D L+L+ Y + S VT Sbjct: 58 PATGATAGTPAPEAEEPEAPRVAISTPSLDGSISLKGGRIDQLSLKNYRETLEPGSDTVT 117 Query: 110 LLSPSNTKNAYFAELDYVS----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 LLSP T +AY+A + TA + P +NTVW + SG L+P TP+ LV+ N Sbjct: 118 LLSPIGTDSAYYALFGWAPGQGLTAETV--PGANTVWKVESGDQLSPETPVTLVWDNQQG 175 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVL 224 + F R IS+D+ ++F + +V N D +P G + RH +P N F + EG I ++ Sbjct: 176 LTFRREISVDDKFMFTVTQSVENTGADTPSLAPYGILARHGEPVDLKNFFILHEGGIRMV 235 Query: 225 GDKSLVEQKYSDIEKSSISNFHES-----NSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 D L E Y D E +S HE+ + W G +D YW + IPS + + F+ Sbjct: 236 -DGQLSEIDYDDFEPAS---NHETLTVNESGWTGFTDHYWMTTLIPSMAGAQVTTFQ--D 289 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 YQ N T+ PG+S T T LFAGAKE+ TI +Y+ + I RF IDWGWF Sbjct: 290 TRRNIYQTTVRKNTETVAPGQSATVTTRLFAGAKEWETIRNYQNEDGIDRFLDSIDWGWF 349 Query: 340 YFIAKPMFMLMSYF------YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +F+ KP+F ++ + + G+ G AI+ T+ +K L PLA K YVS A MK +Q Sbjct: 350 FFLTKPIFAVLHWLNVTLAGMGIAGSMGWAIIGLTLLIKALLLPLAYKSYVSMAKMKELQ 409 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++++++E Q LQK MI+LYK +NP +GC PILLQIP+FF++YKVI ++LE+ Sbjct: 410 PQMEKIKESAGNDR-QKLQKEMIELYKKEKVNPASGCLPILLQIPIFFSLYKVIFVTLEL 468 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKM 507 RHAP+ GWI DL+A DP++++ L+GILP+ P + +GI P+++ +SM++Q K+ Sbjct: 469 RHAPWIGWIDDLSAPDPSSLYNLWGILPWAAPEPGSIIALIFIGILPLLLGISMWLQQKL 528 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 +P P D Q MI WMP VF+F L SF +GL++YW +N+I+ QQ +IM+ G + ++ Sbjct: 529 NPAPTDPTQQMIFAWMPWVFMFMLGSFASGLVVYWIANNMITFAQQYLIMRSQGYKPDVL 588 Query: 568 DRLRSTFSKNYNSQ 581 + S+ + ++ Sbjct: 589 GNILSSMKRKPKTE 602 >gi|190570482|ref|YP_001974840.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019241|ref|ZP_03335048.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190356754|emb|CAQ54113.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995350|gb|EEB55991.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 569 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 219/573 (38%), Positives = 344/573 (60%), Gaps = 18/573 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A LS++I+ W +Y + + +I+ ++ + N A ++ + Sbjct: 1 MSEAKNLILATILSILIIVLWH--IIYDNFLNTSQSQPSIENIEHI-ESSNDLAPMIYQN 57 Query: 61 RAQAL--SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R++ + + RV L N L GSI+LKGA+FDDL L YHL+ SS+SP V LLSP+ +K+ Sbjct: 58 RSEIINSTREQRVNLTNNMLEGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESKD 117 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YFAE ++ I++P+S TVW + K+ + L + N N ILF ISLD++Y Sbjct: 118 VYFAEFGWLDPNEKIKVPDSKTVWQ--ADKL--NQKEVNLFWDNENGILFRMKISLDDNY 173 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +FK+ + NN+ D + P G+I R + + + EG + +K L E Y DI Sbjct: 174 MFKVEQIIENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFNNK-LEEWTYKDIS 232 Query: 239 KSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITI 296 K + S SW G +DKYW + IP K + K+ + + ++Q F I Sbjct: 233 KKRLIKASTSEKSWFGFADKYWFTAIIPEKSDQINVSIKHTNVNNIDKFQVDFVKPYKHI 292 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 LPG S++T N+ FAGAK+ + Y+ L IP F+ +D+G YFI KP+F+L+ YF + Sbjct: 293 LPGASVSTLNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFV 352 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + NFG+AI+L T+ +KLL PL+ + Y+S +K++QP++ ++E +K + K I Sbjct: 353 LKNFGLAILLLTLVIKLLMLPLSNRSYISMFKVKSLQPELTRIKELYKNDSLKQ-HKETI 411 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 L+K +N+NP++ +P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL+A+DPTNIFTL Sbjct: 412 ALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLSASDPTNIFTL 471 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSS 533 FG+ + P + +GI PII +M IQ K+S D Q ++ ++P + VF SS Sbjct: 472 FGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFSS 529 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 FPAGL+IYW +SN+I++VQQ++I + ++G+ Sbjct: 530 FPAGLVIYWIFSNIITLVQQSLIKLLLTRKVGM 562 >gi|148261132|ref|YP_001235259.1| 60 kDa inner membrane insertion protein [Acidiphilium cryptum JF-5] gi|326404533|ref|YP_004284615.1| inner membrane protein OxaA [Acidiphilium multivorum AIU301] gi|166975846|sp|A5G0F8|OXAA_ACICJ RecName: Full=Inner membrane protein oxaA gi|146402813|gb|ABQ31340.1| protein translocase subunit yidC [Acidiphilium cryptum JF-5] gi|325051395|dbj|BAJ81733.1| inner membrane protein OxaA [Acidiphilium multivorum AIU301] Length = 601 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 200/511 (39%), Positives = 299/511 (58%), Gaps = 23/511 (4%) Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY- 126 PR+ + P L GS++L GA+ DDL L YH V SP+V LLS + T +Y+ + + Sbjct: 78 GPRLAISTPLLRGSMSLVGARLDDLVLTRYHQTVKKTSPLVQLLSQAGTAKSYYVQFGWD 137 Query: 127 VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTV 186 + +++++P +TVW SG L+P P+ L + N + FE +++D YLF + V Sbjct: 138 AAPGSSLKVPGPDTVWT-SSGGDLSPAHPVTLSWNNGAGVTFELKLAVDRQYLFTVQQRV 196 Query: 187 TNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI---- 242 N+ + P RI R +F + +G I V +L E Y ++ Sbjct: 197 INHGAAAVEVYPWSRIRRDFLPEEPGSFTLHKGPIGVF-HGTLHEMGYEGVKSGGKHPAA 255 Query: 243 -----SNFHESN--SWLGISDKYWASVFIPSKETSFHSQFKYLSD----GHARYQAKF-S 290 + + +N W GI+ KYW + IPS+ ++YL+D H YQ + + Sbjct: 256 GDAPGTAYQTTNLGGWAGITGKYWLTALIPSQGREVIGAYRYLADPGQPEHGGYQVDYMT 315 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 A + PG + +TT +FAGAK + HYE IP FE ID+GWF+F+ KP+F+ + Sbjct: 316 AKPVDAAPGATASTTTHVFAGAKVLSILSHYETQYRIPLFERAIDFGWFFFLTKPIFIAL 375 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 Y + GN G+AI++ T+ +KL+ FPL + Y S A M+ I PK+ LRE++K Q Sbjct: 376 DYLAGVFGNMGVAIIVFTIGLKLVLFPLVRTSYRSMARMRAITPKVQALRERYKDDQMQ- 434 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 QK ++ LYK +NP AGC P+L QIP+FF++YKVI IS+ MRHAPF WI DL+A DP Sbjct: 435 QQKEIMALYKAEGVNPAAGCLPMLPQIPIFFSLYKVIFISIGMRHAPFVLWIHDLSAEDP 494 Query: 471 TNIFTLFGILPFY---LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 TNIF LFG+LPF+ L F+H+GI PIIM ++M+ Q +++PPP D QA ++ +MPV+F Sbjct: 495 TNIFNLFGLLPFHPSALSPFLHLGILPIIMGITMWGQQRLNPPPPDPTQAKMMQFMPVIF 554 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F L F AGL++Y+ +N ++I+QQ IM+ Sbjct: 555 TFMLGRFAAGLVLYYCVNNTLTILQQWTIMR 585 >gi|254460224|ref|ZP_05073640.1| 60 kDa inner membrane insertion protein [Rhodobacterales bacterium HTCC2083] gi|206676813|gb|EDZ41300.1| 60 kDa inner membrane insertion protein [Rhodobacteraceae bacterium HTCC2083] Length = 601 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 215/614 (35%), Positives = 336/614 (54%), Gaps = 59/614 (9%) Query: 2 ERNWNYFVAIALSVIIVYAW--------------------QNFYVYPRIEEMNNERKNIQ 41 ++N N +A ALS I++ W + V P + ++ + Sbjct: 3 DQNKNLILATALSFIVILVWFVLFPPPEPTPADPNAVISAEGDAVLPSVSAGDDADAGVN 62 Query: 42 TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 T AA ++ Q +PR+ ++ L GSI+L G + D L L+ Y + + Sbjct: 63 T-----------AAAQAEEPTQD---APRIAIETGRLKGSISLLGGRIDQLALKDYRVSL 108 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNI--ELPNSNTVWNLISGKILTPTTPIKLV 159 ++PIV LLSP K+ Y+A + A ++P NT+W+ S L+ P+ L Sbjct: 109 DDDAPIVDLLSPVGEKSPYYALYGWAPGAGLAFEQVPGPNTIWSAQSSGNLSVDAPVTLT 168 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQE 218 + N N + F RTIS+DE+++F + +V N + +P G + RH +PQ N F + E Sbjct: 169 WDNGNGLQFTRTISVDENFMFSVAQSVENTGAGTVSLAPYGILARHGEPQNLKNFFILHE 228 Query: 219 GFIAVLGDKSLVEQKYSDI----------EKSSISNFHESNSWLGISDKYWASVFIPSKE 268 G +A + D L E YSD+ ++ ++ E W+G +D+YW + IP+ Sbjct: 229 GVVA-MSDGELTEIDYSDMPDFDVNPNEGARAEVTQVAE-QGWVGFTDQYWMTTLIPAP- 285 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 +F S KY D YQ + + PG + + T LFAGAKE+ TI YE + Sbjct: 286 GAFKSTAKY-DDRRDIYQTEAVLPTQRLAPGATASATTQLFAGAKEWATIRDYET-AGVE 343 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F IDWGWF+F+ KP+F ++ Y ++GN G AI+ T +KL+ FPLA K VS A Sbjct: 344 GFIDSIDWGWFFFLTKPIFAVLHYLNAMIGNMGWAIIGLTFLIKLILFPLAYKSNVSMAK 403 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 MK +QP++++++E Q LQ+ M+ +YK +NP +GC PIL+QIP+FF++YKVI Sbjct: 404 MKALQPQMEKIKESAGDDK-QKLQQDMMAMYKKEKVNPASGCLPILVQIPIFFSLYKVIF 462 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMF 502 ++LE+RHAP+ GWIKDL+A DP++I LFG+L F P +GI PI++ +SM+ Sbjct: 463 VTLELRHAPWIGWIKDLSAPDPSSILNLFGLLSFVPPEPGSILAIFSLGILPILLGISMW 522 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +Q K++P P D QAMI WMP VF+F L +F +GL++YW +N I+ QQ +IM+ G Sbjct: 523 MQQKLNPAPTDPTQAMIFAWMPWVFMFMLGTFASGLVVYWIANNTITFTQQYLIMRSQGV 582 Query: 563 EIGLIDRLRSTFSK 576 + + +++ F + Sbjct: 583 KPDVFGNIKAGFKR 596 >gi|254293247|ref|YP_003059270.1| hypothetical protein Hbal_0879 [Hirschia baltica ATCC 49814] gi|254041778|gb|ACT58573.1| 60 kDa inner membrane insertion protein [Hirschia baltica ATCC 49814] Length = 600 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 215/596 (36%), Positives = 338/596 (56%), Gaps = 34/596 (5%) Query: 6 NYFVAIALSVIIVYAWQNFYVY---------PRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 ++ + I L V+ V A F+++ R+E +V VD + +A Sbjct: 10 SFMIGIGL-VLCVMALSQFFIWGPQQKAQEQARLEAQAQAAIAAPSVSS-GSVDTTASAA 67 Query: 57 LIDDRAQAL---SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 +D RA+ L S R++ S+ GSI+LKGA+ DDL+++ H + + V LLSP Sbjct: 68 PVD-RAEILTDTSNGGRIDFDASSVDGSISLKGARLDDLSMK-RHFETIEKTEEVHLLSP 125 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 +K AY+A L + A+ LP +T+W +G LTP+TPI L ++ + F R I Sbjct: 126 QGSKGAYYAALGWRGDADR--LPGVSTLWKQTAGSTLTPSTPITLGYET-TQLSFSRKIE 182 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLGDKSLVE 231 +D++Y+F DTVTNNS + + P G MR P + + EG + + G+K L Sbjct: 183 VDDNYMFTYTDTVTNNSSETLSIRPFG-FMRQFGMPDDWKPFYILHEGAVGMAGNK-LKL 240 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG-HARYQAKFS 290 QKY +++K + W+G++ KYW + FIP++ + Q K + DG Y A Sbjct: 241 QKYKNLDKGKALAYTSQGGWIGLTQKYWMTAFIPAQTENVAVQSKVVMDGLRPTYVASIE 300 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL----AIPRFEMLIDWGWFYFIAKPM 346 + I PG++ + + +FAGAK + Y++ AIPRF +DWG F+F KP Sbjct: 301 GTDRAIEPGQTASYSQRIFAGAKRVEVLDAYQQGATGQEAIPRFTDAVDWGNFWFFTKPF 360 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+S+F + GNFG+AI+ TV VKL FFP+ K Y S A M+ + P+++E+++K+ Sbjct: 361 FWLLSHFNSWFGNFGLAILALTVIVKLAFFPIQNKAYASMAKMRKLMPQMEEIKKKWADD 420 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + QK ++LYK NP +GC P++ Q+ VF+ +YK + ++LEMRH PF+GWIKDL+ Sbjct: 421 K-ERQQKETMELYKREKANPFSGCLPLIPQMFVFYGLYKTLFVTLEMRHEPFFGWIKDLS 479 Query: 467 AADPTNIFTLFGILPF---YLP--GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 A DPT+ LFG LPF LP G + +G+ PI+ +M++ ++ PP D Q M++ Sbjct: 480 APDPTSFLNLFGALPFDPSSLPLIGALSIGVLPILYGFTMWLLQNLNAPPPDPTQRMMMQ 539 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 ++P+VF F + F AGL+IYW+WSN++SI QQ IM+ +G E +++ F K+ Sbjct: 540 FLPIVFTFIFAGFAAGLVIYWTWSNILSIAQQYYIMRKNGVETQFDKFIKAKFGKS 595 >gi|254421078|ref|ZP_05034802.1| 60Kd inner membrane protein [Brevundimonas sp. BAL3] gi|196187255|gb|EDX82231.1| 60Kd inner membrane protein [Brevundimonas sp. BAL3] Length = 599 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 211/536 (39%), Positives = 318/536 (59%), Gaps = 20/536 (3%) Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + DR+QALS + RV +++ +L GS++L+G + DDL L Y P V L P Sbjct: 63 TFVTDRSQALSTAARVPIQSGTLKGSLSLQGGRIDDLFLTDYKETQDKPEP-VELFRPQG 121 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 +NAYFA+ + +P NTVW L +G LTPTTP+ L + N + F R +S+D Sbjct: 122 MQNAYFAQFGWTGPNVVGGVPGPNTVWRLTAGSTLTPTTPVTLTWDNGQGLRFTRLVSVD 181 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLG---DKSLVE 231 + Y+F I+DTV N I +P G + R P A ++ V EG I G D + Sbjct: 182 DRYVFSILDTVQNLGTQSITIAPYGSVQRQGVPPLAGSSHIVHEGAIGTFGKPGDYRTEQ 241 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFS 290 +KY D K + WLGI+DKYW + +P + + ++F+ +G + +A Sbjct: 242 KKYKDWLKEPRIENASTGGWLGITDKYWLAALLPQQNEAVETEFRVRDVNGGQQLEANIL 301 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 TI PG + T T LFAG K + YE+ L +PRF IDWG F+F+ +P+F ++ Sbjct: 302 GAARTIQPGGTATETQRLFAGVKRAEVLKTYEETLHLPRFVYAIDWGMFWFLTRPIFWIL 361 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 Y LVG+FG+AI+ TV VKL+ FPLA Y S + M+N+QPK++E+++KFK PQ Sbjct: 362 ENVYGLVGSFGVAILALTVIVKLVMFPLANNAYASMSKMRNLQPKMEEIKKKFKDD-PQK 420 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 Q+ + LY+ INP+AGC P++LQIPVF+A+YKV+++++EMRH PF G+I DL+A DP Sbjct: 421 QQQETMALYQKEKINPVAGCLPLVLQIPVFYALYKVLTVTIEMRHQPFLGFIHDLSARDP 480 Query: 471 TNIFTLFGILPF----------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 + ++ LFG++P+ L G + +G+ + L+M++Q M+PP AD Q I Sbjct: 481 SVVWNLFGLIPWNPATLPLLGGLLVGPLGIGLLAVAYGLTMWLQTAMNPPAADPVQRQIF 540 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID---RLRST 573 +MP+VF F ++ F AGL++YW+WSN+++I+QQ IM + AE + D R+R T Sbjct: 541 QFMPLVFTFIMAPFAAGLLVYWAWSNILTILQQYYIMHRYKAENPIDDFIARIRKT 596 >gi|255264683|ref|ZP_05344025.1| 60 kDa inner membrane insertion protein [Thalassiobium sp. R2A62] gi|255107018|gb|EET49692.1| 60 kDa inner membrane insertion protein [Thalassiobium sp. R2A62] Length = 601 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 210/600 (35%), Positives = 338/600 (56%), Gaps = 32/600 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN-----ERKNIQTVKQPNQVDNSYA-- 54 ++N N +A ALS +++ W F ++P E + + ++I P D A Sbjct: 3 DQNKNLILATALSFLVILVW--FVLFPPEEPVVDPITAETAQSIDGATVPT-ADTGIAPT 59 Query: 55 -AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 ++ S +PR+ ++ L GSI+L G + DDL+L+ Y +++ + +V LLSP Sbjct: 60 TGEAEPEQEAEASDAPRIAIETEKLSGSISLLGGRLDDLSLKDYPIELDAEE-VVRLLSP 118 Query: 114 SNTKNAYFAELDYVSTANNIE--LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 T NAY+A + + +P NT+W + SG L + + L + N + F R Sbjct: 119 VGTDNAYYALYGWAAAQGVAADAVPGPNTLWTVESGDTLNTSDAVTLAWDNGAGLTFRRE 178 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 IS+DE Y+F I +V N + ++ +P G I RH F + EG + + D L E Sbjct: 179 ISVDEDYMFNITQSVENTTSTEVALAPYGFIARHGEPDTVGFFILHEGVVR-MSDGELQE 237 Query: 232 QKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 Y+D+ I + N W+G +DKYW + +P++ ++F S Y + + Sbjct: 238 IDYNDMPDFDIDARRGAPAESIDVTENGWVGFTDKYWMTNIVPTQGSAFKSSAIY-NPRN 296 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQ + T+ G + + LFAGAKE+ I +Y+ D I F IDWGWF+F+ Sbjct: 297 DIYQTEALMPTQTVAVGATAAVSTQLFAGAKEWEAIRNYQNDGGIDGFLDSIDWGWFFFL 356 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F L+ + ++GN G +I++ T+ +K + PLA K YVS A MK +QP++++L+E Sbjct: 357 TKPIFALLHWLNGVIGNMGWSIIVLTLIIKAILLPLAYKSYVSMARMKELQPEMEKLKEA 416 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q LQ+ M++LYK + +NP +GC PILLQIP+FF++YKVI +++E+RHA + GWI Sbjct: 417 -SGDDRQKLQQGMMKLYKDNKVNPASGCVPILLQIPIFFSLYKVIFVTIELRHAEWMGWI 475 Query: 463 KDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 +DL+A DP++I LFG+LPF P + +G+ PII+ +SM++Q K++P P D Q Sbjct: 476 RDLSAPDPSSILNLFGLLPFNTPESGSLLFILSLGVLPIILGISMWMQQKLNPAPTDPTQ 535 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 MI WMP VF+F L SF +GL++YW +N I+ QQ +IM+ G + + +R++ S+ Sbjct: 536 KMIFAWMPWVFMFMLGSFASGLVLYWIANNTITFTQQYLIMRSQGVKPDVFGNIRASLSR 595 >gi|310816968|ref|YP_003964932.1| inner membrane protein oxaA, putative [Ketogulonicigenium vulgare Y25] gi|308755703|gb|ADO43632.1| inner membrane protein oxaA, putative [Ketogulonicigenium vulgare Y25] Length = 612 Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/603 (36%), Positives = 330/603 (54%), Gaps = 36/603 (5%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK------QPNQVDNSYAAV 56 +N N +A LS++++ W F+++P E N + QT P S A Sbjct: 4 QNKNLILATVLSLVVIVVW--FFLFPP-EATNPTLTDEQTTSVATDGTLPVGGAGSTAGS 60 Query: 57 L--IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 L I D + + + RV ++ P L GSI+L G + DDL L Y + +S V LL P Sbjct: 61 LEAITDADASPATAARVGIETPRLSGSISLLGGRIDDLFLSDYQETIDEDSATVRLLRPV 120 Query: 115 NTKNAYFAELDYVSTANNIE---LPNSNTVWNLISG-KILTPTTPIKLVFKNANNILFER 170 + AY+A + + A I +P +T+W+L S LTP TP+ LV+ N +F Sbjct: 121 GERGAYYASFGWAA-AQGIAPEAVPGPDTLWSLESANDTLTPETPVTLVWDNGAGQVFRT 179 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSL 229 T ++D Y+F + +V N + P G + RH P+ F + EG I + D L Sbjct: 180 TFAIDADYMFTVDQSVQNMGDAAVEMRPYGLVRRHGMPEGLREFFILNEG-IVRMADGRL 238 Query: 230 VEQKYSDIEK---------SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 E KYS + + ++ ES W+G +D YW + IP + F S KYL Sbjct: 239 EEMKYSKMSDMNDAELGVPAEVAEAQESG-WIGFTDHYWMTTLIPEQGQPFRSVQKYLPS 297 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 +Q + + G +T + LFAGAKE+ TI Y+ + +PRF IDWGWFY Sbjct: 298 -RDIFQVEAVMPRQDVAAGAEVTISTRLFAGAKEWATIREYQNEDGVPRFIDSIDWGWFY 356 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ KP+F ++ + +GN G +I+ T+ +K + PLA K YVS A MK +QP++++L+ Sbjct: 357 FLTKPIFSVLHWLNQHIGNMGWSIIALTLILKAIVLPLAYKSYVSMARMKELQPELEKLQ 416 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 + K Q LQ M++LYK + +NP +GC P+++QIP+FF++YKVI +++E+RHAP+ G Sbjct: 417 ARHKDD-RQALQTGMMELYKKNKVNPASGCLPMIVQIPIFFSLYKVIFVTIELRHAPWIG 475 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADK 514 W++DL+A DPT+I LFG+LP+ P +G+ PI + LSM++Q K++P P D Sbjct: 476 WLQDLSAPDPTSILNLFGLLPWGTPEIDSFFFIFSLGVLPIFLGLSMWLQQKLNPLPPDP 535 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 Q MI WMP VF+F L SF +GL++YW +NVI+ VQQ IM HG L + F Sbjct: 536 TQRMIFAWMPWVFMFMLGSFSSGLVLYWIANNVITFVQQYSIMTYHGHRPDLFGNILGGF 595 Query: 575 SKN 577 + Sbjct: 596 KRK 598 >gi|330993393|ref|ZP_08317328.1| Inner membrane protein oxaA [Gluconacetobacter sp. SXCC-1] gi|329759423|gb|EGG75932.1| Inner membrane protein oxaA [Gluconacetobacter sp. SXCC-1] Length = 578 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 186/506 (36%), Positives = 300/506 (59%), Gaps = 18/506 (3%) Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 PRV + + GS++L+GA+ DDL L+ YH V + SP+V +L P + E+ + Sbjct: 54 DPRVAIDADRVHGSLDLRGARLDDLVLKNYHETVQNGSPLVRVLEPRGQEQPNLVEVGWA 113 Query: 128 S-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTV 186 + + ++ +P++NT+W LT P+ L + N +F T+++D++Y+F + V Sbjct: 114 NVSGGHVAVPDANTLWT-ADHDSLTQARPVTLSWDNGQGQVFSITVAIDQNYMFSVTQKV 172 Query: 187 TNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 TN+ + + P R+ R T + V EG I+V+ D L E Y + K ++ + Sbjct: 173 TNHGGEPVSLYPFSRVERGYTPVETGGYLVHEGPISVI-DHRLDESSYKSLRKGAVPPGN 231 Query: 247 ------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA---RYQAKFSANE-ITI 296 W GI+DKYW + IP +++ + Y G+ Y F+A + + Sbjct: 232 IAWTKAGQGGWAGITDKYWLAAVIPQQDSDVAGTYAYQGAGNGDKGTYDVGFTARAPLVV 291 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G +T + +FAGAKE P + YE L IP F +D+GWF F+ +P+F ++ + + Sbjct: 292 AAGGEASTASHVFAGAKEVPLLEKYESSLHIPDFWKAVDFGWFAFLTRPIFTVLDWLNTM 351 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GNFG+A+M T+ VK LFFPLA KQ+ S M+ +QPKI LRE++K L + MI Sbjct: 352 LGNFGLALMAFTLLVKALFFPLATKQFHSMGKMRQLQPKIKALRERYKDD-QMALNQQMI 410 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYK +NP +GC P+LLQIPVF+ +YK + +++EMRHAPF+GWI DL+A DPTN+FTL Sbjct: 411 GLYKQEGVNPASGCLPMLLQIPVFWCLYKDLYVTIEMRHAPFFGWIHDLSAFDPTNLFTL 470 Query: 477 FGILPF---YLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALS 532 FG++P+ + + +G+WPI L+MF QM+++P P AD Q + +MP++F F ++ Sbjct: 471 FGLIPWNPSVISPMLQLGLWPIAFGLTMFAQMRLNPTPTADPAQQKMFQFMPIIFTFFMA 530 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558 P+GL+IY+ W+N++++ QQ +I + Sbjct: 531 RQPSGLVIYYCWNNLLTMAQQTLIQR 556 >gi|225630056|ref|YP_002726847.1| putative inner membrane protein translocase component YidC [Wolbachia sp. wRi] gi|225592037|gb|ACN95056.1| putative inner membrane protein translocase component YidC [Wolbachia sp. wRi] Length = 566 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 217/556 (39%), Positives = 341/556 (61%), Gaps = 23/556 (4%) Query: 9 VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL--S 66 +A LS++I+ +W+ +Y N + I+ ++ N + A ++ +R++ + + Sbjct: 9 LAAILSMLIMVSWR--IIYDNFFSTNQNQPLIEHIESFNDL----APIIHQNRSEIINST 62 Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 RV L N + GSI+LKGA+FDDL L YHL+ SS+SP V LLSP+ +K+ YFAE + Sbjct: 63 REQRVSLTNNMIKGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESKDVYFAEFGW 122 Query: 127 VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTV 186 + +N I++P+S VW + K+ + L + N N ILF I+LD++Y+FK+ V Sbjct: 123 LDPSNKIKVPDSKAVWR--ADKL--NQKEVNLSWDNENGILFRMKINLDDNYMFKVEQVV 178 Query: 187 TNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI--SN 244 NN+ D + P G+I R + + + EG + +K L E Y DI K + +N Sbjct: 179 ENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFDNK-LEEWTYKDISKKHLIKAN 237 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDGHARYQAKFSANEITILPGKSIT 303 E N W G +DKYW +V IP K + K+ ++ ++Q F + +ILPG S + Sbjct: 238 TSEKN-WFGFADKYWLTVIIPEKSDKINVSIKHTNANDIDKFQVDFVKSYKSILPGASTS 296 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 N+ FAGAK+ + Y+ L IP F+ +D+G YFI KP+F+L+ YF ++ NFG+A Sbjct: 297 NVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGLA 356 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ +KLL PL+ + YVS +K++QP++ ++E +K + K I L+K +N Sbjct: 357 ILLLTLVIKLLMLPLSNRSYVSMFKVKSLQPELTRVKELYKNDSLK-QHKETIALFKRNN 415 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP++ +P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL+A DPTNIFTLFG+ + Sbjct: 416 VNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFFLWIKDLSAPDPTNIFTLFGLFNYN 475 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLII 540 P + +GI PII +M IQ K+S D Q ++ ++P + VF SSFPAGL+I Sbjct: 476 FP--ISIGILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFSSFPAGLVI 533 Query: 541 YWSWSNVISIVQQAVI 556 YW +SN+I+++QQ++I Sbjct: 534 YWIFSNIITLIQQSLI 549 >gi|103485502|ref|YP_615063.1| putative inner membrane protein translocase component YidC [Sphingopyxis alaskensis RB2256] gi|98975579|gb|ABF51730.1| 60 kDa inner membrane insertion protein [Sphingopyxis alaskensis RB2256] Length = 584 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 194/493 (39%), Positives = 296/493 (60%), Gaps = 10/493 (2%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 L+ R+ ++ P++ GSINL GA+ DD+ L Y + +SP V L +P T AYFA L Sbjct: 82 LAEGQRIPIETPAIRGSINLVGARIDDITLTKYRQTIKKDSPAVRLFAPGGTPAAYFASL 141 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 + TA I+LP + TVW +G LTPTTP+ L + N F S+D +YL Sbjct: 142 GW--TAQGIQLPGAGTVWT-ANGTKLTPTTPVTLSWTNTTGQTFRIEYSIDANYLITAKQ 198 Query: 185 TVTNNSIDQIRFSPRGRIMR-HKPQT--ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS- 240 TV N + S I R KP +++ + G L KS+ + Y D+E++ Sbjct: 199 TVVNAGTAPVSLSSFALIDRLGKPTDPHEVDSWTIHVGPTGYLDGKSVFDIDYDDLEEAP 258 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 + S + S WLG +DKYW + +P+K + S YQ F+ + + PG+ Sbjct: 259 NRSVRYTSAGWLGFTDKYWLAAIVPAKGERVTAAIS--SPATNNYQTLFARDFTQVAPGQ 316 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 +T T+ +FAGAKE + Y+ D I R IDWGWF F P+F L+ + + VGNF Sbjct: 317 QLTATSRIFAGAKEVEILETYQDDQGITRLSNAIDWGWFEFFEVPIFKLLHWLFEKVGNF 376 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AIM T+ ++LL FP+A +Q+ S A M+ +QPK+ L+E++K P+ +Q+ +++LYK Sbjct: 377 GLAIMALTLIIRLLMFPIANRQFSSMAQMRVVQPKMKALQERYKDDKPR-MQQELMKLYK 435 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 INPLAGC PI++QIP+F+A+YKV+ +++EMRH PF WIKDL+A DP +I LFG+L Sbjct: 436 DEKINPLAGCLPIVIQIPIFYALYKVLMLAIEMRHQPFILWIKDLSAPDPLHILNLFGLL 495 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 PF P + +G+ +I+ ++M++Q +++P PAD QA + MP +F+F ++ F AGL++ Sbjct: 496 PFTPPSILAIGLLAVILGVTMWLQFRLNPAPADPVQAQVFKIMPWLFMFIMAPFAAGLLL 555 Query: 541 YWSWSNVISIVQQ 553 YW +N++SI QQ Sbjct: 556 YWITNNILSIGQQ 568 >gi|332186329|ref|ZP_08388074.1| Inner membrane protein translocase component YidC, long form [Sphingomonas sp. S17] gi|332013697|gb|EGI55757.1| Inner membrane protein translocase component YidC, long form [Sphingomonas sp. S17] Length = 565 Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust. Identities = 200/564 (35%), Positives = 314/564 (55%), Gaps = 15/564 (2%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ---PNQVDNSYAAV-- 56 E N+ V ++ +I++ W + + N I KQ N N A Sbjct: 3 EDRKNFVVFAVIAALILFGWP--LIQSKFFPSNPPATKIVDGKQVPVANSTANPTATTPS 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 I DR L+ +PRV + P L GSINLKGA+ DDL L Y V+ +SP + LLSP+ Sbjct: 61 AIRDRRVVLAETPRVAIDTPRLKGSINLKGARIDDLVLLDYKETVAKDSPPIRLLSPAGA 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 + AYFA + + + + P ++TVW S +L P P+ L NA F+ T+S+D+ Sbjct: 121 EGAYFAGFGWRT--DGLNPPAADTVWT-ASAPVLRPGQPVTLTAANATGQRFQITLSVDK 177 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y+F + TV N + + G + R +++ + G ++V + + D Sbjct: 178 DYMFTVQQTVANGGNAPVPVAAYGYVNRGI-SADPDSWTIHVGPMSVNDGTAHYGPNWKD 236 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 ++K+ + F + WLG +DKYW + IP + +F QF+ + YQA ++ T+ Sbjct: 237 LDKAP-TRFTTTGGWLGFTDKYWLATLIPDQSKAFDGQFR--AGAGQTYQADYTLQPQTL 293 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG+ +T T FAGAKE + Y + + +DWG+ + KP+F + + + L Sbjct: 294 APGRQVTQTTRFFAGAKEVALLDRYTDKEGATKLDYALDWGYLRVLEKPIFYYLDWLFRL 353 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGNFG+AI+L TV ++ L FP+A++Q+ S A M+ +QPK+ L+E++K ++ Q+ M Sbjct: 354 VGNFGVAIILLTVTIRALMFPIAQRQFASMAAMRAVQPKMKALQERYKDDKVRMQQEVM- 412 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYK +NPLAGC P L+QIP+F+A+YKV+ +++EMRH PF WIKDL+A DP L Sbjct: 413 ALYKQEKVNPLAGCLPTLIQIPIFYALYKVLMLTIEMRHQPFVAWIKDLSAPDPLTPVNL 472 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 FG+LPF P F+ +G+ PI++ +SM+ Q KM+P P D Q + +P V +F ++ F Sbjct: 473 FGLLPFTPPHFIAIGVVPILLGISMYFQFKMNPQPMDDAQKQVFAILPWVLMFVMAPFAV 532 Query: 537 GLIIYWSWSNVISIVQQAVIMKMH 560 GL +YW +N ISI+QQ ++ H Sbjct: 533 GLQVYWITTNCISILQQRLLYARH 556 >gi|58698973|ref|ZP_00373828.1| 60 kd inner-membrane protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58534513|gb|EAL58657.1| 60 kd inner-membrane protein [Wolbachia endosymbiont of Drosophila ananassae] Length = 549 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 209/514 (40%), Positives = 321/514 (62%), Gaps = 17/514 (3%) Query: 51 NSYAAVLIDDRAQAL--SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 N A ++ +R++ + + RV L N + GSI+LKGA+FDDL L YHL+ SS+SP V Sbjct: 28 NDLAPIIHQNRSEIINSTREQRVSLTNNMIKGSISLKGARFDDLILTNYHLEPSSSSPQV 87 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 LLSP+ +K+ YFAE ++ +N I++P+S VW + K+ + L + N N ILF Sbjct: 88 VLLSPAESKDVYFAEFGWLDPSNKIKVPDSKAVWR--ADKL--NQKEVNLSWDNENGILF 143 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 I+LD++Y+FK+ V NN+ D + P G+I R + + + EG + +K Sbjct: 144 RMKINLDDNYMFKVEQVVENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFDNK- 202 Query: 229 LVEQKYSDIEKSSI--SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDGHARY 285 L E Y DI K + +N E N W G +DKYW +V IP K + K+ ++ ++ Sbjct: 203 LEEWTYKDISKKHLIKANTSEKN-WFGFADKYWLTVIIPEKSDKINVSIKHTNANDIDKF 261 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 Q F + +ILPG S + N+ FAGAK+ + Y+ L IP F+ +D+G YFI KP Sbjct: 262 QVDFVKSYKSILPGASTSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKP 321 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + YVS +K++QP++ ++E +K Sbjct: 322 VFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKVKSLQPELTRVKELYKN 381 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + K I L+K +N+NP++ +P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL Sbjct: 382 DSLK-QHKETIALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFFLWIKDL 440 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNW 522 +A DPTNIFTLFG+ + P + +GI PII +M IQ K+S D Q ++ + Sbjct: 441 SAPDPTNIFTLFGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKF 498 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +P + VF SSFPAGL+IYW +SN+I+++QQ++I Sbjct: 499 LPYISVFIFSSFPAGLVIYWIFSNIITLIQQSLI 532 >gi|42520132|ref|NP_966047.1| putative inner membrane protein translocase component YidC [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409869|gb|AAS13981.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 569 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 211/555 (38%), Positives = 335/555 (60%), Gaps = 18/555 (3%) Query: 9 VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL--S 66 +A LS++I+ +W+ +Y + + I+ ++ N A ++ +R++ + + Sbjct: 9 LAAILSMLIMVSWR--IIYDNFFSTSQNQPLIENIEHIESF-NDLAPIIYQNRSEIINST 65 Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 RV L N + GSI+LKGA+FDDL L YHL+ SS+SP V LLSP+ +K+ YFAE + Sbjct: 66 REQRVSLTNNMIKGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESKDVYFAEFGW 125 Query: 127 VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTV 186 + +N I++P+S VW + K+ + L + N N ILF I+LD++Y+FK+ V Sbjct: 126 LDPSNKIKVPDSKAVWR--ADKL--NQKEVNLSWDNENGILFRMKINLDDNYMFKVEQVV 181 Query: 187 TNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 NN+ D + P G+I R + + + EG + +K L E Y DI K + Sbjct: 182 ENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFDNK-LEEWTYKDISKKHLIKAS 240 Query: 247 ESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITILPGKSITT 304 S +W G +DKYW + IP K + K+ + + ++Q F +ILPG S++ Sbjct: 241 TSEKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNTDKFQVDFVKPYKSILPGASVSN 300 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 N+ FAGAK+ + Y+ L IP F+ +D+G YFI KP+F+L+ YF ++ NFG+AI Sbjct: 301 VNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAI 360 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 +L T+ +KLL L + Y+S +K++QP++ ++E +K + K I L+K +N+ Sbjct: 361 LLLTLVIKLLMLSLFNRSYISMFKVKSLQPELTRIKELYKNDSLK-QHKETIALFKRNNV 419 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NP++ +P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL+A DPTNIFTLFG+ + Sbjct: 420 NPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFFLWIKDLSAPDPTNIFTLFGLFNYNF 479 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 P + +GI PII +M IQ K+S D Q ++ ++P + VF SSFPAGL+IY Sbjct: 480 P--ISIGILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFSSFPAGLVIY 537 Query: 542 WSWSNVISIVQQAVI 556 W +SN+I+++QQ++I Sbjct: 538 WIFSNIITLIQQSLI 552 >gi|85374954|ref|YP_459016.1| putative inner membrane protein translocase component YidC [Erythrobacter litoralis HTCC2594] gi|84788037|gb|ABC64219.1| preprotein translocase subunit [Erythrobacter litoralis HTCC2594] Length = 581 Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust. Identities = 200/570 (35%), Positives = 311/570 (54%), Gaps = 18/570 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N +A+ L +++ W Y YP+ E + TV +S AA L Sbjct: 1 MDNQRNLLLAVVLCGVLIIGWDAAMNYFYPQPAEPIEAVEGSPTVASAPVAGSSTAATLD 60 Query: 59 DDRA--------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + A AL+ R+ + P + GSINL GA+ DD+ L+ + V +S V + Sbjct: 61 NGAAAQGPVELSDALATPERIRIDAPRVEGSINLVGARIDDIELKDHRATVDEDSGPVQM 120 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 +P NT YFA+ +V + LP S+TVW+ G+ LT P+ L + N F Sbjct: 121 FAPQNTDAQYFAQFGWV--GEGVSLPTSDTVWS-ADGETLTQGNPVTLSWDNGAGQQFRI 177 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 S+D++Y+ T N + P I R +T+T+ G + V GD + Sbjct: 178 RFSIDDNYMITAEQTAANTGGGPVVARPFATITRTSETASTDTWIAHSGPMGVFGDSADY 237 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 Y D+ + WLG SD Y+ +P + + F+ + G ++A Sbjct: 238 GPDYDDLADDGPYSGEGKARWLGFSDIYFLGALVPQADADPQTGFRPI--GENLFRADVI 295 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 T+ PG ++ T LFAGAKE + YE D I +F + IDWGWF + KP+ L+ Sbjct: 296 YQPATVAPGNEVSRTTQLFAGAKESEILDQYE-DAGIDKFGLAIDWGWFRWFEKPLLWLL 354 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + ++LVGNFG+AI+L TV ++ L FP+A+KQ+ S A MK +QPK+ ++EK+K Q Sbjct: 355 NQLFDLVGNFGVAIILLTVIIRGLLFPIAQKQFGSMAAMKAVQPKMKAIQEKYKDDK-QK 413 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 Q+ ++ LYK +NPLAGC P+L+QIP+FFA+YKV+ +++EMRH PF WI+DL+A DP Sbjct: 414 QQQEIMALYKEEKVNPLAGCLPLLIQIPIFFALYKVLILAIEMRHQPFALWIEDLSAPDP 473 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 +IF LFG+LPF +PG + +G +++ ++M++ +M+ P D Q I N MP V +F Sbjct: 474 AHIFNLFGLLPFEVPGLIAIGPLAVLLGVTMWLTFQMN-PVTDPIQRQIFNIMPWVLMFI 532 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ F AGL++YW+ SNV+++ QQ + H Sbjct: 533 MAPFAAGLLLYWNTSNVLTLAQQRYLYSKH 562 >gi|87198602|ref|YP_495859.1| putative inner membrane protein translocase component YidC [Novosphingobium aromaticivorans DSM 12444] gi|87134283|gb|ABD25025.1| protein translocase subunit yidC [Novosphingobium aromaticivorans DSM 12444] Length = 600 Score = 363 bits (931), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 197/576 (34%), Positives = 309/576 (53%), Gaps = 25/576 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQN----FYVYP----------RIEEMNNERKNIQTVKQP 46 M+ N +A+ L+ I++ W FY P E N E+ + ++ Sbjct: 1 MQNQRNLIMAVVLTGILLLGWDVAMRWFYPQPAQKPKVEAAASAEPANGEKP--KRTREG 58 Query: 47 NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + A+ D AQ L+ R+ + P L GSINLKGA DD+ L + V NS Sbjct: 59 GLQNAGDIALEKKDLAQELAAGHRIAIDAPGLKGSINLKGALVDDVTLARHREGVDRNSA 118 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 V L SP+ T +FA++ +V + P++NT+W G LTP TP+ L + NA+ Sbjct: 119 PVRLFSPAGTPAQHFAQIGWVG--EGVAAPDANTMWQ-ADGAKLTPQTPVTLRWTNASGQ 175 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 + ++D Y+ V N + P + R + +T+ V G I Sbjct: 176 TYSIRYAIDGDYMITATQGVANTGPAPVVVRPFALVNRTDKTASLDTWNVHSGPIGAFDG 235 Query: 227 KSLVEQKYSDIEKSSISN--FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 + YS + ++ F + +W+G +D YW S IP + F+ L G Sbjct: 236 SVNFDNNYSTVAEAEGGAIPFKGTANWIGFTDIYWLSALIPDANAKAEAAFRSL--GQGV 293 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y+A ++I PGK+++ T LFAG KE + YE + F + IDWGWF + K Sbjct: 294 YRADLIYPSVSIAPGKALSQTVRLFAGGKENAVLEKYEA-AGVTNFSLSIDWGWFRWFEK 352 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + VGNFG+AI+L T+ V+ + FP+A++Q+ S A M+ +QPK+ ++E++K Sbjct: 353 PIFWLLDSIFKKVGNFGVAIILLTLIVRGVMFPIAQRQFASMAAMRALQPKMKAIQERYK 412 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q Q+ +++LYK +NPLAGC PI LQIPVFFA+YKV+ +++EMRH PF WIKD Sbjct: 413 DDK-QKQQQEIMELYKREKVNPLAGCLPIFLQIPVFFALYKVLVLTIEMRHQPFALWIKD 471 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DP ++ LFG+LPF P F+ +G+ I++ ++M++Q K+ P D Q + +MP Sbjct: 472 LSAPDPLHVLNLFGLLPFDPPSFLGIGVLAILLGITMWLQFKLQPAAMDPAQQQVFAFMP 531 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + +F ++ F AGL+IYW SN+++I QQ + H Sbjct: 532 WIMMFVMAPFAAGLLIYWITSNLLTIAQQKYLYSRH 567 >gi|296283114|ref|ZP_06861112.1| putative inner membrane protein translocase component YidC [Citromicrobium bathyomarinum JL354] Length = 585 Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 203/568 (35%), Positives = 317/568 (55%), Gaps = 15/568 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY-----PRIEEMNNERKNIQTVKQPNQVDNSYAA 55 M+ N +A+ L I++ ++ Y P E+++ Q V Q + + AA Sbjct: 1 MDNQRNLILAVVLCGILILGYEAAVTYYYPTPPETEQVDRATTAEQRVTQDTAQNPAIAA 60 Query: 56 VLID---DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 ID D +ALS RV + P + GSINL GA+ DD+ L+ + V +S V L + Sbjct: 61 AAIDEAVDLDEALSAGNRVAIDAPRVEGSINLVGAKIDDIELKDHRATVDKDSGPVQLFA 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 P+ T FA+ +V ++P ++TVW SG+ LTP TPI L + NA F + Sbjct: 121 PAGTPIQNFAQFGFV--GEGTQVPGADTVWQ-ASGEALTPDTPIDLRWDNAQGQRFRIRL 177 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 S+D++Y+ TV N + SP I R + +T+ G I G Sbjct: 178 SIDDNYMITAEQTVANTGDAPVVVSPFATITRTSLTASKSTWISHSGPIGTFGGTVDYGP 237 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 Y D+ + + + +WLG +D YW IP ++ + F+ L D ++A N Sbjct: 238 DYDDVVEQKVVSGAADPAWLGFTDIYWLGALIPEAGSAPDTGFRSLGDN--LFRADLIYN 295 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 T+ PG+ IT T+ LFAGAKE + Y+ D I +F + IDWGWF + KP+ L+ Sbjct: 296 PATLQPGRQITRTSRLFAGAKESGVLDAYQ-DAGIAQFGLAIDWGWFRWFEKPILWLLLQ 354 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +++VGNFG+AI+L T V+ L FP+A+K + S A+MK IQP++ +L+EK K Q Sbjct: 355 IFSVVGNFGVAIILLTCIVRGLMFPIAQKGFSSMASMKAIQPEMKKLQEKHKDDK-VTQQ 413 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M +L+K +NP+AGC P+LLQIPVFFA+YKV+ +++EMRH PF WI+DL+A DP + Sbjct: 414 QEMQKLFKERGVNPVAGCLPMLLQIPVFFALYKVLILAIEMRHQPFIFWIRDLSAPDPAH 473 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I LFG+LPF +PG + +G +++ +M++ +++P D Q + + MP V +F +S Sbjct: 474 ILNLFGMLPFEVPGMLALGPLALLLGFTMWLTFRLNPAAMDPVQQQVFSIMPWVMMFVMS 533 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMH 560 F AGL++YW+ SN++++ QQ + H Sbjct: 534 PFAAGLLLYWNTSNILTLAQQKYLYSKH 561 >gi|58040258|ref|YP_192222.1| putative inner membrane protein translocase component YidC [Gluconobacter oxydans 621H] gi|58002672|gb|AAW61566.1| 60 kD inner membrane protein OxaA [Gluconobacter oxydans 621H] Length = 575 Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 193/510 (37%), Positives = 299/510 (58%), Gaps = 21/510 (4%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 R+ + P + GS+NLKGA DDL L Y ++ +SP+V LL + + + F + + + Sbjct: 67 RIPVTGPDVQGSLNLKGAVLDDLILMKYRETLAKDSPLVRLLDKAGSAHPTFVVIGWTNA 126 Query: 130 -ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN 188 +N LP+ NTVW S + LTP P+ L + N ++F I+LDEHY+F + TV N Sbjct: 127 PGSNARLPDLNTVWE-SSDETLTPDHPVTLHWDNGQGLVFSIQIALDEHYMFAVSQTVEN 185 Query: 189 NSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 +S + P R+ R P+ A F EG IAV+G + + ++ Y ++ K + H Sbjct: 186 HSGQPVALVPFERVQRDYDAPEGA---FTAHEGPIAVIGGR-MQDESYKNLRKGADHPDH 241 Query: 247 ES------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA-NEITILPG 299 S N W GISDK+W + P+ T + F Y+ YQ S N I+P Sbjct: 242 VSWSSTGTNGWDGISDKFWLTAVAPADGTPVAASFAYVPGTPGSYQVGMSTQNAQQIMPN 301 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 SIT + +FAGAK + Y K L IP + ID+GWF F+ +P+ L+ + Y +GN Sbjct: 302 GSITEKSHVFAGAKVVSLLQGYSKQLGIPDLDKAIDFGWFSFLTRPLLTLLHWLYLHLGN 361 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 FG+A+M T+ VK++ FPLA K S+A M+ + PK+ E+REK K P + QK M LY Sbjct: 362 FGLALMALTLIVKIVLFPLASKAAQSSARMRLLAPKVKEIREKNKDDPMAMNQKVM-ALY 420 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 + ++P +GC P+L+Q P+FF +YK+++IS++ RHAPF+GWI DL+ DPTN+F LFG+ Sbjct: 421 REEKVSPASGCLPMLIQAPIFFCLYKILNISIDARHAPFFGWIHDLSMPDPTNVFNLFGL 480 Query: 480 LPF---YLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSF 534 LPF + F+HV IW + L+ ++ + + A D QA ++ +MP+V+VF +S F Sbjct: 481 LPFDPTHYSSFLHVSIWGTALGLTFWLLQRQTSSTASLDPAQARMMQFMPLVYVFFMSGF 540 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 PA L++Y++W+N++++ QQ I + G + Sbjct: 541 PASLLVYYTWNNLLTVAQQMFIQRRTGLPV 570 >gi|88607700|ref|YP_505133.1| putative inner membrane protein translocase component YidC [Anaplasma phagocytophilum HZ] gi|88598763|gb|ABD44233.1| inner membrane protein, 60 kDa [Anaplasma phagocytophilum HZ] Length = 568 Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 196/570 (34%), Positives = 320/570 (56%), Gaps = 29/570 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP-NQVDN--SYAAVL 57 M N +A+ SV I+ W+ Y+Y + + +Q + +VD+ YA+ Sbjct: 1 MSEVRNLILAVVASVAIMLGWK--YIYGEFFAVKTVPEGVQESESLIPEVDDIVDYASY- 57 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + AL PRVELKN L S++L+GA DD +L Y + + NS V L+SP T Sbjct: 58 ----SDALKQVPRVELKNSKLAASVSLRGALIDDASLVKYRVSLDKNSENVLLMSPEGTV 113 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 + E +V + +++P +TVW L G + + + N ++F S+D+ Sbjct: 114 SDSMVEFGWVDPKHVLKVPGRDTVWALEDG---SDEQNFTIRWDNGEGLIFRLKFSVDQD 170 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+ + V NN+ + + GRI R +++ + + EG I G L E Y ++ Sbjct: 171 YMLTVAQEVINNTDVNVHLAHYGRINRAHSKSSKSFWISHEGAIGSFG-HGLKEWTYKNL 229 Query: 238 EK------SSISNFHESNSWLGISDKYWASVFIPSK----ETSFHSQFKYLSDGHARYQA 287 E+ S ++ SW+G +DKYW + IPS + +F +Q Y +G +R+Q Sbjct: 230 EEAGSIRLSGVTREDGGRSWIGFADKYWFTALIPSASEQGKLAFRTQRVY-REGASRFQV 288 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +S + TI + LF GAKE + Y+ L IP F+ +D+G YFI KP+F Sbjct: 289 DYSKSHGTIGAHDKVEAVTHLFMGAKELELLDQYKDTLNIPMFDKAVDFGMLYFITKPVF 348 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +L+ YF+ L+GNFG+AI++ TV +KL+ FPL+ + YVS +K +QP++ ++E +K Sbjct: 349 LLLQYFHKLLGNFGLAIVMLTVAIKLVAFPLSMRSYVSMFKLKRLQPEVLRIKELYKTDD 408 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 ++ K + L+K H ++PL+G P+L+QIP+FFA+YKV+ +++EMRHAP +GWI+DL++ Sbjct: 409 LRI-SKEIASLFKKHKVSPLSGFLPVLIQIPIFFALYKVLFVTIEMRHAPLFGWIRDLSS 467 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPADKGQAMILNWMPVV 526 D N LFG++P P +G+ P+++ L+M +Q K M A + ++ ++P + Sbjct: 468 QDTANFLNLFGLIPLEPP--FCIGVLPVVLGLTMVLQQKVMQKDQATPDRYGVMKFLPYI 525 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 FVF SSFP+GL++YW SNVI+I+QQ VI Sbjct: 526 FVFVFSSFPSGLVLYWICSNVITILQQIVI 555 >gi|85709448|ref|ZP_01040513.1| putative inner membrane protein translocase component YidC [Erythrobacter sp. NAP1] gi|85688158|gb|EAQ28162.1| putative inner membrane protein translocase component YidC [Erythrobacter sp. NAP1] Length = 595 Score = 353 bits (906), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 198/576 (34%), Positives = 305/576 (52%), Gaps = 25/576 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF--YVYPR---------IEEMNNERKNIQTVKQ---- 45 M+ N +A+ LS +++ +W Y YP+ + ++ + TV Sbjct: 1 MDNQRNILLAVVLSGLLILSWDMGMRYFYPQSDVPAPSEVMSGAASDPADADTVTSSTDG 60 Query: 46 -PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + + A V D AL+ RV + P + GSINL GA+ DDL L+ Y Sbjct: 61 PAGDLGEAAAEVGPVDLGTALASENRVIIDAPRVAGSINLVGARVDDLVLKDYDETTQEG 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 S V +L+P T ++AE +V + +S +W G+ LTP TP+ L + N Sbjct: 121 SDPVRILAPDRTDEQHYAEFGFVVGGQRM---SSRAIWE-ADGERLTPETPVTLSRTDEN 176 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 I + S+D++Y+ TV N S + P I R + + F G V Sbjct: 177 GITYRVAFSIDDNYMVSAQQTVENGSENAAIVQPFALIKRTSETASPDQFIAHAGPTGVF 236 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 G Y ++ + N + SWLG +D YWAS IP + + + ++ L D R Sbjct: 237 GGSLYDPNSYEELAELGRDNPAGAVSWLGFTDNYWASALIPGEGEADSAGWRSLGDQLFR 296 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + A T+ G S+T LFAGAKE + YE D I F I WGWF + K Sbjct: 297 ADLIYDAQ--TVPAGGSLTRGTQLFAGAKESAILDQYE-DAGITYFGKAISWGWFEWFEK 353 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+ L+ LVGNFG+AI+L TV ++ L FP+A+KQ+ S A MK +QPK+ ++E++K Sbjct: 354 PLLWLLRTLNGLVGNFGVAIILLTVIIRGLLFPIAQKQFASMAQMKAVQPKMKAIQERYK 413 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q Q+ +++LYK +NPLAGC P+L+QIP+FFA+YKV+ +++EMRH PF ++ D Sbjct: 414 DDK-QTQQQKIMELYKEEKVNPLAGCLPLLIQIPIFFALYKVLYLAIEMRHEPFL-YMSD 471 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DP I LFG+LP+ +PGF+ +GI +++ ++M++ K++P D Q I N MP Sbjct: 472 LSAPDPAKILNLFGLLPYDVPGFLGIGILAVLLGVTMWLTFKLNPSAMDPVQQQIFNLMP 531 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +F ++ F AGL+IYW SNV+++ QQ+ + H Sbjct: 532 WFLMFVMAPFAAGLLIYWVTSNVLTLAQQSYLYSRH 567 >gi|326386366|ref|ZP_08207989.1| putative inner membrane protein translocase component YidC [Novosphingobium nitrogenifigens DSM 19370] gi|326209027|gb|EGD59821.1| putative inner membrane protein translocase component YidC [Novosphingobium nitrogenifigens DSM 19370] Length = 606 Score = 352 bits (904), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 195/580 (33%), Positives = 302/580 (52%), Gaps = 26/580 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF--YVYPRIEE------------------MNNERKNI 40 ME+ N A+ L II+ W Y YP E + + Sbjct: 1 MEKQRNLIWAVVLMGIILIGWDLGLRYFYPHAGEHPHAAASSTATSASGTAPASGDAAPA 60 Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 + ++ + A+ D AL+ RV + P + GSINL G DDL L + Sbjct: 61 KPTREGGLQSPADIAIEAQDLKTALAAPTRVAIAAPGVSGSINLVGGLIDDLTLNRHRET 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 + SP V L SP+ T ++A+L + N ++ P NTVW + LTPTTP+ L + Sbjct: 121 SDAGSPPVRLFSPAGTPAQHYAQLGWTGD-NGVQTPQGNTVWQADRTR-LTPTTPVTLRW 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 NA F ++DE+Y+ +VTN + P I R + +T+ V G Sbjct: 179 TNATGQTFAIRYAIDENYMISAQQSVTNAGTAPVSVKPFALINRTDRTASLDTWQVHSGP 238 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 I Y D+ + +W+G +D YW S +P T F+ L + Sbjct: 239 IGAFDGSVDFASHYKDVNAAGEVAPAGQTNWIGFTDIYWLSALVPDAGTKPSGSFRALGN 298 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G R + A T+ PG++++ + LFAGAKE + YE I F + IDWGWF Sbjct: 299 GFFRADLIYPA--ATVAPGQTVSQSLRLFAGAKENRVLEAYEAQ-GISNFSLAIDWGWFR 355 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + KP+F L+ ++ V NFGIAI+L T+ V+ + FP+A++Q+ S A M+ IQPK+ ++ Sbjct: 356 WFEKPIFWLLDSLFHAVKNFGIAIILLTLIVRGIMFPVAQRQFASMAAMRAIQPKMKAIQ 415 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E++K P+ Q+ ++ LYK +NPLAGC P+ LQIPVFFA+YKV+ +++EMRH PF Sbjct: 416 ERYKDDKPRQ-QQEIMALYKEEGVNPLAGCLPMFLQIPVFFALYKVLVLTIEMRHQPFAL 474 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL++ DPT++ LFG+LPF G +G+ +++ +M++Q K+ P D Q ++ Sbjct: 475 WIHDLSSPDPTHLLNLFGLLPFTPTGMFGIGVLALLLGATMWLQFKLQPAAMDPSQQQVM 534 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 MP + +F +S+F +GL+IYW SN+++I QQ + H Sbjct: 535 AIMPWMMMFVMSTFASGLLIYWITSNLLTIAQQRYLYSRH 574 >gi|58584448|ref|YP_198021.1| putative inner membrane protein translocase component YidC [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418764|gb|AAW70779.1| Preprotein translocase subunit YidC [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 572 Score = 350 bits (897), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 212/574 (36%), Positives = 336/574 (58%), Gaps = 17/574 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV-YPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M N +A LS++I+ +W+ Y + E+ + +NI+ ++ N + A V+ Sbjct: 1 MSEARNLILAAILSILIIVSWRIIYDNFLNAEQDHPLIENIEHIESFNDL----APVIHQ 56 Query: 60 DRAQAL--SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 R++ + + R+ L N + GSI+LKGA+FDDL L Y L+ +SP V LLSP+ +K Sbjct: 57 SRSEIINSTREQRINLTNNMVKGSISLKGARFDDLILTNYCLEPDPSSPQVVLLSPAESK 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 + YFAE ++ ++P+S T W + LT + L + N N I+F +SLD + Sbjct: 117 DVYFAEFGWLDPNGKTKVPDSKTFWQAEKTE-LTNQKAVNLFWNNENGIVFRMKVSLDNN 175 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+FK+ V NN+ D + P G+I R + + + EG + D L E Y ++ Sbjct: 176 YMFKVEQIVENNTKDNVVLVPYGKINRKRDNINESYWISHEGILGAF-DNKLEEWTYKNV 234 Query: 238 EKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA-RYQAKFSANEIT 295 K + S +W G +DKYW + IP K + K+ + + ++Q F Sbjct: 235 AKKHLIKASTSKKNWFGFADKYWLTAIIPEKFDKTNVSIKHTNANNVDKFQVDFVKPYKN 294 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 ILPG S + N+ FAGAK+ + +Y+ L IP F+ +D+G YFI KP+F+L+ YF Sbjct: 295 ILPGTSASNVNYFFAGAKKLNLLDYYKSTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNF 354 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++ NFG+AI+L T+ +KLL PL+ + YVS MK++QP++ ++E +K + K Sbjct: 355 VLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKMKSLQPEVARIKELYKNDSLK-QHKET 413 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 I L+K +N+NP++ PIL+QIPVFFA+YKV+ +++EMRHAPF WIKDL+ +DPTNIFT Sbjct: 414 IALFKKNNVNPMSSILPILVQIPVFFALYKVLFVTIEMRHAPFCLWIKDLSTSDPTNIFT 473 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPVVFVFALS 532 LFG+ + P + +GI PII+ ++M IQ K+ D QA ++ + P + +F S Sbjct: 474 LFGLFNYNFP--ISIGILPIILGITMIIQQKIGEKGQTNKDDIQANVMKFFPYISIFIFS 531 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 SFPAGL+IYW +SNVI+++QQ++I ++G+ Sbjct: 532 SFPAGLVIYWIFSNVITLIQQSLIKLFLTRKLGI 565 >gi|149186358|ref|ZP_01864671.1| putative inner membrane protein translocase component YidC [Erythrobacter sp. SD-21] gi|148829947|gb|EDL48385.1| putative inner membrane protein translocase component YidC [Erythrobacter sp. SD-21] Length = 579 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 191/572 (33%), Positives = 310/572 (54%), Gaps = 28/572 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----NFYVYPRIEEMNNERKNIQTVKQP--------NQ 48 ME + N+ + + LS+ ++ WQ +FY P +N +TV P + Sbjct: 1 MENSRNFVLVLTLSLAVLIGWQWAMDHFYPQP-----DNVPVTAETVDTPAEAAAAASGE 55 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 + S A + D +L + R+ + +P + GSI + GA DD+ L+ Y +S V Sbjct: 56 IGESAATSV--DLESSLGAAERIRIDSPKVAGSIAVGGAMIDDIVLKDYAASPDGDSEPV 113 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 + +P T +A+ ++ I + + +W G L+ P+ L N +L Sbjct: 114 RIFAPRGTDVQQYAQFGFLVNGAKI---SDDVLWE-SDGDTLSVGNPVTLRHDAGNGVLL 169 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 E+T S+DE+Y+ + V+N + I P G + R + + F G I G Sbjct: 170 EQTYSIDENYMITVEQAVSNRGENGIVAQPFGLVGRTSTTMSDDFFIAHSGPIGSFGQAV 229 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 YSD+E+ + + WLG +D YW + +P T + F+ L G Y+A Sbjct: 230 EYGYDYSDVEEERKVSPSGTTDWLGFTDIYWLAALVPQAGTDPDATFRSL--GGDLYRAD 287 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + + + G+ +TTT+ LFAGAK+ + Y+ D IP+F + IDWGWF + KP Sbjct: 288 MIYDPVRVEAGRKVTTTSRLFAGAKDSEILDAYQ-DAGIPQFGLAIDWGWFRWFEKPFLW 346 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + LVGNFG+AI++ T+ V+ L FP+A+KQ+ S A MK IQPK+ +L+E+ K Sbjct: 347 LLKNIFALVGNFGVAIIILTIIVRGLMFPIAQKQFASMAAMKAIQPKMKKLQERHKDDKV 406 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + Q+ M +L+K +NPLAGC P++LQIP+FFA+YKV+ +++EMRH F WI+DL+A Sbjct: 407 K-QQQEMQKLFKEEQVNPLAGCLPLILQIPIFFALYKVLYLAIEMRHQNFL-WIEDLSAP 464 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I LFG+LPF P F+ +GI +++ ++M++ K++P D Q + + MP V + Sbjct: 465 DPATILNLFGLLPFTPPSFLAIGILAVLLGVTMWLTFKLNPSAMDPVQQQVFSIMPWVLM 524 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 F ++ F AGL++YW SNV+++ QQ + H Sbjct: 525 FIMAPFAAGLLLYWVTSNVLTLAQQKYLYSKH 556 >gi|161544990|ref|YP_153758.2| putative inner membrane protein translocase component YidC [Anaplasma marginale str. St. Maries] Length = 572 Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 184/507 (36%), Positives = 294/507 (57%), Gaps = 14/507 (2%) Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 R A++ PRV L N S+ SI+LKGA DD++L Y + +S V L+SP T+ Sbjct: 58 RVDAINSVPRVRLGNTSVRASISLKGALVDDVSLTKYQVSTDKHSENVVLMSPEGTREDS 117 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E ++ + ++P+ NT+W + G + L + N ++F S+D Y+F Sbjct: 118 IVEFGWIDPEHKTKVPDKNTLWEVEQGSEASGEGSATLRWDNGQGLVFRLRFSIDRAYMF 177 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + V N++ + +R S GRI + Q + + EG I G L E Y D++K Sbjct: 178 SVSQEVENSTGEDLRLSYYGRINKAHAQDGKSYWISHEGAIGSFG-HGLQEWTYKDMQKG 236 Query: 241 SISNFHESNS-----WLGISDKYWASVFIPSKET---SFHSQFKYLSDGHARYQAKFSAN 292 S + +N W+G++DKYW + +PS + +F ++ +D +Q FS + Sbjct: 237 SGARVGATNEGTGSHWIGLADKYWFTALVPSSDKGKLAFRAKHVPRNDVD-HFQVDFSRS 295 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G +T LF GAKE + +Y L IP F+ +D+G YFI KP+F L+ Y Sbjct: 296 YGTIPAGGKAESTTQLFIGAKELAVLDNYRSGLNIPLFDKAVDFGVLYFITKPVFQLLQY 355 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F+ +VGNFG+AI++ T+ +KL+ FPL+ K YVS +K +QP+I +RE K ++ Sbjct: 356 FHKVVGNFGLAIVMLTIAIKLVVFPLSSKSYVSMFKLKKLQPEISRIRELHKTDDVRI-S 414 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 K + L++ H ++P++G PIL+QIPVFFA+YKV+ +++EMRHAP + WI+DL++ D N Sbjct: 415 KEISALFRKHGVSPMSGFLPILVQIPVFFALYKVLFVTIEMRHAPLFAWIQDLSSHDTAN 474 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAMILNWMPVVFVFAL 531 + LFG+L F P + VG+ PII+ ++M +Q K++ A + ++ ++P VFVF Sbjct: 475 LLNLFGLLRFEPP--ICVGVLPIILGITMVLQQKINQQDQATQDPYGVMKFLPYVFVFIF 532 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 SSFPAGL++YW SNVI+++QQ + + Sbjct: 533 SSFPAGLVLYWICSNVITMLQQLFVRR 559 >gi|255003028|ref|ZP_05277992.1| putative inner membrane protein translocase component YidC [Anaplasma marginale str. Puerto Rico] Length = 647 Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 184/507 (36%), Positives = 294/507 (57%), Gaps = 14/507 (2%) Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 R A++ PRV L N S+ SI+LKGA DD++L Y + +S V L+SP T+ Sbjct: 133 RVDAINSVPRVRLGNTSVRASISLKGALVDDVSLTKYQVSTDKHSENVVLMSPEGTREDS 192 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E ++ + ++P+ NT+W + G + L + N ++F S+D Y+F Sbjct: 193 IVEFGWIDPEHKTKVPDKNTLWEVEQGSEASGEGSATLRWDNGQGLVFRLRFSIDRAYMF 252 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + V N++ + +R S GRI + Q + + EG I G L E Y D++K Sbjct: 253 SVSQEVENSTGEDLRLSYYGRINKAHAQDGKSYWISHEGAIGSFG-HGLQEWTYKDMQKG 311 Query: 241 SISNFHESNS-----WLGISDKYWASVFIPSKET---SFHSQFKYLSDGHARYQAKFSAN 292 S + +N W+G++DKYW + +PS + +F ++ +D +Q FS + Sbjct: 312 SGARVGATNEGTGSHWIGLADKYWFTALVPSSDKGKLAFRAKHVPRNDVD-HFQVDFSRS 370 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G +T LF GAKE + +Y L IP F+ +D+G YFI KP+F L+ Y Sbjct: 371 YGTIPAGGKAESTTQLFIGAKELAVLDNYRSGLNIPLFDKAVDFGVLYFITKPVFQLLQY 430 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F+ +VGNFG+AI++ T+ +KL+ FPL+ K YVS +K +QP+I +RE K ++ Sbjct: 431 FHKVVGNFGLAIVMLTIAIKLVVFPLSSKSYVSMFKLKKLQPEISRIRELHKTDDVRI-S 489 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 K + L++ H ++P++G PIL+QIPVFFA+YKV+ +++EMRHAP + WI+DL++ D N Sbjct: 490 KEISALFRKHGVSPMSGFLPILVQIPVFFALYKVLFVTIEMRHAPLFAWIQDLSSHDTAN 549 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAMILNWMPVVFVFAL 531 + LFG+L F P + VG+ PII+ ++M +Q K++ A + ++ ++P VFVF Sbjct: 550 LLNLFGLLRFEPP--ICVGVLPIILGITMVLQQKINQQDQATQDPYGVMKFLPYVFVFIF 607 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 SSFPAGL++YW SNVI+++QQ + + Sbjct: 608 SSFPAGLVLYWICSNVITMLQQLFVRR 634 >gi|222475049|ref|YP_002563464.1| 60kD inner-membrane protein (yidC) [Anaplasma marginale str. Florida] gi|255004151|ref|ZP_05278952.1| putative inner membrane protein translocase component YidC [Anaplasma marginale str. Virginia] gi|56387916|gb|AAV86503.1| 60 kD inner-membrane protein [Anaplasma marginale str. St. Maries] gi|222419185|gb|ACM49208.1| 60kD inner-membrane protein (yidC) [Anaplasma marginale str. Florida] Length = 647 Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 184/507 (36%), Positives = 294/507 (57%), Gaps = 14/507 (2%) Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 R A++ PRV L N S+ SI+LKGA DD++L Y + +S V L+SP T+ Sbjct: 133 RVDAINSVPRVRLGNTSVRASISLKGALVDDVSLTKYQVSTDKHSENVVLMSPEGTREDS 192 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E ++ + ++P+ NT+W + G + L + N ++F S+D Y+F Sbjct: 193 IVEFGWIDPEHKTKVPDKNTLWEVEQGSEASGEGSATLRWDNGQGLVFRLRFSIDRAYMF 252 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + V N++ + +R S GRI + Q + + EG I G L E Y D++K Sbjct: 253 SVSQEVENSTGEDLRLSYYGRINKAHAQDGKSYWISHEGAIGSFG-HGLQEWTYKDMQKG 311 Query: 241 SISNFHESNS-----WLGISDKYWASVFIPSKET---SFHSQFKYLSDGHARYQAKFSAN 292 S + +N W+G++DKYW + +PS + +F ++ +D +Q FS + Sbjct: 312 SGARVGATNEGTGSHWIGLADKYWFTALVPSSDKGKLAFRAKHVPRNDVD-HFQVDFSRS 370 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G +T LF GAKE + +Y L IP F+ +D+G YFI KP+F L+ Y Sbjct: 371 YGTIPAGGKAESTTQLFIGAKELAVLDNYRSGLNIPLFDKAVDFGVLYFITKPVFQLLQY 430 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F+ +VGNFG+AI++ T+ +KL+ FPL+ K YVS +K +QP+I +RE K ++ Sbjct: 431 FHKVVGNFGLAIVMLTIAIKLVVFPLSSKSYVSMFKLKKLQPEISRIRELHKTDDVRI-S 489 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 K + L++ H ++P++G PIL+QIPVFFA+YKV+ +++EMRHAP + WI+DL++ D N Sbjct: 490 KEISALFRKHGVSPMSGFLPILVQIPVFFALYKVLFVTIEMRHAPLFAWIQDLSSHDTAN 549 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAMILNWMPVVFVFAL 531 + LFG+L F P + VG+ PII+ ++M +Q K++ A + ++ ++P VFVF Sbjct: 550 LLNLFGLLRFEPP--ICVGVLPIILGITMVLQQKINQQDQATQDPYGVMKFLPYVFVFIF 607 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 SSFPAGL++YW SNVI+++QQ + + Sbjct: 608 SSFPAGLVLYWICSNVITMLQQLFVRR 634 >gi|254796769|ref|YP_003081605.1| inner membrane protein, 60 kDa [Neorickettsia risticii str. Illinois] gi|254590012|gb|ACT69374.1| inner membrane protein, 60 kDa [Neorickettsia risticii str. Illinois] Length = 585 Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 199/568 (35%), Positives = 322/568 (56%), Gaps = 30/568 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M++ +N F+A LS +++ W + P E +E ++VK ++++ + Sbjct: 20 MQQTYNVFIATLLSFLVIIGWNLVFYNPAQRESLHEVPKRESVKVYESLESTLS------ 73 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + R+++ + L GSI L G DDL L+ Y D LL P+ TK AY Sbjct: 74 -------TERIKISSSKLEGSIQLTGLALDDLILKDYKSDDLKGQ--YRLLYPNKTKGAY 124 Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 F + + + P+S T W S ++LTP P+ + N + +LF+ +S+D++Y+ Sbjct: 125 FINPGWTIPGDAGLRTPSSKTKWQADS-ELLTPGNPVTFSWDNRSGLLFKVVVSVDDNYM 183 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F V N S + + I + P+T + + EG + V+ D+ L+E KYS I K Sbjct: 184 FTFKQIVENKSQNDLSVGSHFTITKRLPETNKSMLIMHEGPVGVIKDQ-LIELKYSKIAK 242 Query: 240 SSIS-----NFHESNSWLGISDKYW--ASVFIPSKETSFH-SQFKYLSDGHARYQAKFSA 291 + S + + W G SDKYW + +F S + + S SD R F+A Sbjct: 243 KNKSIAFDEDAQNQHGWFGFSDKYWFVSQIFENSSDGKLYISHVDDKSDDIFRI-TNFNA 301 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 +I + G IT LFAG K+ + Y +++ I F+ +D+G YFI KP+ L+ Sbjct: 302 QKI-VRGGGFITKETMLFAGPKKLSLLEEYAQNMRIYLFDRAVDFGVLYFITKPISKLLQ 360 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 FY+LVGNFG+AI+L T F+++L PL+ K +S +K +QP+I +++ + Q+ L Sbjct: 361 VFYHLVGNFGVAIILLTFFIRVLMLPLSIKSGISMFKIKELQPEILKIKSIY-QNDKDAL 419 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +A ++L++ H + P++GC P LLQ+PVFFA+YKVI I++EMR APF+ WI DL+ DPT Sbjct: 420 NRASVELFRKHRVTPMSGCLPTLLQVPVFFALYKVIFITIEMRQAPFFLWISDLSLPDPT 479 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMILNWMPVVFVFA 530 N+FTLFG++ + P F+ +GI PII+ L+M IQ K+SP + G QA ++ MP VF+ Sbjct: 480 NLFTLFGLINWNCPDFLSIGILPIILGLTMVIQQKLSPSHYEDGTQAFMIKAMPYVFMIL 539 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +SFP+GL++YW ++N++S+VQQ +I + Sbjct: 540 FASFPSGLVLYWVFNNILSLVQQFMIGR 567 >gi|88608477|ref|YP_506289.1| inner membrane protein, 60 kDa [Neorickettsia sennetsu str. Miyayama] gi|88600646|gb|ABD46114.1| inner membrane protein, 60 kDa [Neorickettsia sennetsu str. Miyayama] Length = 566 Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 200/568 (35%), Positives = 322/568 (56%), Gaps = 30/568 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M++ +N F+A LS +++ W + P E +E + ++VK ++++ + Sbjct: 1 MQQTYNVFIATLLSFLVIIGWNLVFYNPTQRESFHEVQKKESVKVYESLESTLS------ 54 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + R+++ + L GSI L G DDL L+ Y D + LL P+ TK AY Sbjct: 55 -------TERIKISSSKLEGSIQLTGLALDDLILKDYKSDDLKDQ--YRLLYPNKTKGAY 105 Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 F + + + P+S T W S ++LTP +P+ + N +LF+ +S+D++Y+ Sbjct: 106 FINPGWTIPGDPGLRTPSSKTKWQADS-ELLTPGSPVTFSWDNGFGLLFKVVVSIDDNYM 164 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F V N S + + I + P+T + + EG + V+ D+ L+E KYS I K Sbjct: 165 FTFKQIVENKSQNDLSVGSHFTITKSLPETNKSMLIMHEGPVGVVKDQ-LMELKYSKIAK 223 Query: 240 SSIS-----NFHESNSWLGISDKYW--ASVFIPSKETSFH-SQFKYLSDGHARYQAKFSA 291 + S + W G SDKYW + +F S + + S SD R F+A Sbjct: 224 KNKSIAFDEDTQNQRGWFGFSDKYWFVSQIFENSSDGKVYISHIDDKSDDIFRI-TNFNA 282 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 +I + G I LFAG K+ + Y +++ I F+ +D+G YFI KP+ L+ Sbjct: 283 QKI-VRGGGLIVKETMLFAGPKKLSLLEEYAQNMRIYLFDRAVDFGVLYFITKPISKLLQ 341 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 F++LVGNFG+AI+L T F+++L PL+ K +S +K +QP+I +++ + Q+ L Sbjct: 342 VFHHLVGNFGVAIILLTFFIRVLMLPLSIKSGISMFKIKELQPEILKIKSMY-QNDKDAL 400 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +A ++L++ H + P++GC P LLQ+PVFFA+YKVI I++EMR APF+ WI DL+ DPT Sbjct: 401 NRASVELFRKHRVTPMSGCLPTLLQVPVFFALYKVIFITVEMRQAPFFLWISDLSLPDPT 460 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMILNWMPVVFVFA 530 N+FTLFG++ + P F+ +GI PII+ L+M IQ K+SP D G QA ++ MP VF+ Sbjct: 461 NLFTLFGLIDWNCPDFLSIGILPIILGLTMVIQQKLSPSHYDDGTQAFMIKAMPYVFMIL 520 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +SFP+GL++YW ++NV+S++QQ VI K Sbjct: 521 FASFPSGLVLYWVFNNVLSLLQQFVIGK 548 >gi|114798266|ref|YP_759144.1| inner membrane protein, 60 kDa [Hyphomonas neptunium ATCC 15444] gi|114738440|gb|ABI76565.1| inner membrane protein, 60 kDa [Hyphomonas neptunium ATCC 15444] Length = 606 Score = 336 bits (862), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 203/590 (34%), Positives = 306/590 (51%), Gaps = 36/590 (6%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ-A 64 N+ +A+A + V+ +Q F + P + E+ +Q D A +L + A Sbjct: 8 NFLIAMAAMIAFVFLYQYFVMEPAQKRYEAEQAVAVAAEQAAVTDTGVAEILGPKSLEDA 67 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 L+ RV+ ++ G+I L GA+ DDL+L+ ++ V + I LL P T+ AYF Sbjct: 68 LAEDGRVKFDANAVDGTIRLAGARIDDLSLKQFYTTVEREAEI-RLLRPEATEGAYFG-- 124 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 Y N + N+VW + G LT TP+ L + + +R IS+D +Y+F D Sbjct: 125 TYYWADGNALVAGRNSVWTQVGGDTLTTATPVTLRLET-EGMTIDREISIDANYMFSFRD 183 Query: 185 TVTNNSIDQIRFSPRGRIMRH----------KPQTATNT-------FGVQEGFIAVLGDK 227 T+TN S G RH P +AT+ GV +G + + K Sbjct: 184 TLTNTSGAARTVRAIGSFERHGDWKRFLEITDPASATSGGPAHLGLMGVADGELRLQKYK 243 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQ 286 L++ K E + F + W G++D YW +P + F + S + Sbjct: 244 PLMQSKKISGESGEGTFFSDEGGWWGLTDMYWMGALVPEQARPFTASVNRASLARGGPLE 303 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + I + PG S+T N LFAGAK+F + YEK +PRF IDWGW YF+ KP Sbjct: 304 VRTEGAAIEVAPGASVTVENGLFAGAKQFEVLQGYEKS-GLPRFVDAIDWGWAYFLTKPF 362 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F ++ + +G+FG +I+ TV VKL PL + S A +K +Q + +L E+F + Sbjct: 363 FYVLHWLNGYLGSFGWSILAFTVLVKLPLVPLYNASFKSMAKLKKLQEPMKQLNERFA-A 421 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ Q+ +++LYK NP+ GC PIL IP+F+A+YK + +SLEMRHAPF ++KDL+ Sbjct: 422 DPQRKQQELMKLYKEEGANPIGGCLPILFTIPIFYALYKTLYVSLEMRHAPF-AYLKDLS 480 Query: 467 AADPTNIFTLFGILPFYLPG----------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 A DPT I LFG++PF+ + +GI PI+ +M +SPPP DK Q Sbjct: 481 APDPTAIGNLFGLIPFWSGADVKSIPIIGIIIGIGILPILYGATMAALQSLSPPPPDKMQ 540 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 A I+ MP+VF+F F AGL++YW WSNV++ +QQ +IM+M+G E L Sbjct: 541 ARIIMAMPIVFMFVFGGFAAGLVMYWVWSNVLTFIQQYIIMRMNGVETEL 590 >gi|260753817|ref|YP_003226710.1| inner membrane protein translocase component YidC [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553180|gb|ACV76126.1| 60 kDa inner membrane insertion protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 579 Score = 336 bits (861), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 176/518 (33%), Positives = 291/518 (56%), Gaps = 10/518 (1%) Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 Q L +PR+ + S+ GS+NLKG + DDL L + ++ NSP V L SP+ T+NA+F Sbjct: 65 QVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTENAWFT 124 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 + T N+ LPN++++W S K LT P+ + N +F T+S+D Y+F Sbjct: 125 SFGW--TGENVALPNADSLWKADSDK-LTAEHPVNFYWNNQQGQIFRITLSVDHDYMFNA 181 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 ++V N + P +++ + G I V ++DI+K++ Sbjct: 182 TESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADIDKATN 241 Query: 243 SNFHES--NSWLGISDKYWASVFIP-SKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 ++ S W+G SDKYW + P +++ + + F+ S+ H YQA F+ + + G Sbjct: 242 NSIRNSTQGGWIGFSDKYWLTALAPHNQKIAIDTDFRSSSNHH--YQADFTVAPVMVAAG 299 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 K+ +T+ +FAGAKE + Y L +P F+ IDWGWF I K F + + + VGN Sbjct: 300 KTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFLHVGN 359 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G+AI+L ++ L FP+A KQY S A+M+ +QPK+ +RE++K ++ Q+ ++ LY Sbjct: 360 YGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEARMRQE-LVTLY 418 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 + +NP AGC P+ +Q P+F A+YK + +++E RH PF WIKDL+A DP F LFG+ Sbjct: 419 QKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFNLFGL 478 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 L F P F+ +G+ PII+ ++M++Q + SP + Q I++++P++ V ++ AGL Sbjct: 479 LHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLAAGLQ 538 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRL-RSTFSK 576 +Y+ ++N+IS+ Q + H DR R SK Sbjct: 539 VYYIFNNLISLAQMMWLQHRHSTPEERQDRAERKRLSK 576 >gi|241762238|ref|ZP_04760320.1| 60 kDa inner membrane insertion protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373285|gb|EER62904.1| 60 kDa inner membrane insertion protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 579 Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 178/519 (34%), Positives = 291/519 (56%), Gaps = 12/519 (2%) Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 Q L +PR+ + S+ GS+NLKG + DDL L + ++ NSP V L SP+ T+NA+F Sbjct: 65 QVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTENAWFT 124 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 + T N+ LPN++++W S K LT P+ + N +F T+S+D Y+F Sbjct: 125 SFGW--TGENVALPNADSLWKADSDK-LTADHPVNFYWNNQQGQIFRITLSVDHDYMFNA 181 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS-- 240 ++V N + P +++ + G I V ++DI+K+ Sbjct: 182 TESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADIDKATN 241 Query: 241 -SISNFHESNSWLGISDKYWASVFIP-SKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 SI N + W+G SDKYW + P +++ + + F+ S+ H YQA F+ + + Sbjct: 242 NSIRN-NTQGGWIGFSDKYWLTALAPHNQKIAIDTDFRSSSNHH--YQADFTVAPVVVAA 298 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 GK+ +T+ +FAGAKE + Y L +P F+ IDWGWF I K F + + + VG Sbjct: 299 GKTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFLHVG 358 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+L ++ L FP+A KQY S A+M+ +QPK+ +RE++K ++ Q+ ++ L Sbjct: 359 NYGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEARMRQE-LVTL 417 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y+ +NP AGC P+ +Q P+F A+YK + +++E RH PF WIKDL+A DP F LFG Sbjct: 418 YQKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFNLFG 477 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 +L F P F+ +G+ PII+ ++M++Q + SP + Q I++++P++ V ++ AGL Sbjct: 478 LLHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLAAGL 537 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL-RSTFSK 576 +Y+ ++N+IS+ Q + H DR R SK Sbjct: 538 QVYYIFNNLISLAQMMWLQHRHSTPEERQDRAERKRLSK 576 >gi|56552522|ref|YP_163361.1| putative inner membrane protein translocase component YidC [Zymomonas mobilis subsp. mobilis ZM4] gi|59803051|sp|Q9RNL5|OXAA_ZYMMO RecName: Full=Inner membrane protein oxaA gi|56544096|gb|AAV90250.1| YidC translocase/secretase [Zymomonas mobilis subsp. mobilis ZM4] Length = 579 Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 175/511 (34%), Positives = 288/511 (56%), Gaps = 11/511 (2%) Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 Q L +PR+ + S+ GS+NLKG + DDL L + ++ NSP V L SP+ T+NA+F Sbjct: 65 QVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTENAWFT 124 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 + T N+ LPN++++W S K LT P+ + N +F T+S+D Y+F Sbjct: 125 SFGW--TGENVALPNADSLWKADSDK-LTADHPVNFYWNNQQGQIFRITLSVDHDYMFNA 181 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS-- 240 ++V N + P +++ + G I V ++DI+K+ Sbjct: 182 TESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADIDKATN 241 Query: 241 -SISNFHESNSWLGISDKYWASVFIP-SKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 SI N + W+G SDKYW + P +++ + + F+ S+ H YQA F+ + + Sbjct: 242 NSIRN-NTQGGWIGFSDKYWLTALAPHNQKIAIDTDFRSSSNHH--YQADFTVAPVVVAA 298 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 GK+ +T+ +FAGAKE + Y L +P F+ IDWGWF I K F + + + VG Sbjct: 299 GKTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFLHVG 358 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+L ++ L FP+A KQY S A+M+ +QPK+ +RE++K ++ Q+ ++ L Sbjct: 359 NYGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEARMRQE-LVTL 417 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y+ +NP AGC P+ +Q P+F A+YK + +++E RH PF WIKDL+A DP F LFG Sbjct: 418 YQKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFNLFG 477 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 +L F P F+ +G+ PII+ ++M++Q + SP + Q I++++P++ V ++ AGL Sbjct: 478 LLHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLAAGL 537 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 +Y+ ++N+IS+ Q + H DR Sbjct: 538 QVYYIFNNLISLAQMMWLQHRHSTPEERQDR 568 >gi|269958897|ref|YP_003328686.1| inner membrane protein translocase component YidC [Anaplasma centrale str. Israel] gi|269848728|gb|ACZ49372.1| inner membrane protein translocase component YidC [Anaplasma centrale str. Israel] Length = 572 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 182/511 (35%), Positives = 295/511 (57%), Gaps = 21/511 (4%) Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 RA A++ PRV L N +++ SI+LKGA DD++L+ Y + +S V L+SP T+ Sbjct: 57 RADAVNSVPRVGLGNSNVLASISLKGALVDDVSLKKYQVSTDKHSENVVLMSPEGTQEDS 116 Query: 121 FAELDYVSTANNIELPNSNTVWNL-----ISGKILTPTTPIKLVFKNANNILFERTISLD 175 E ++ +++++P+ +T+W + G + TT L + N ++F SLD Sbjct: 117 IVEFGWIDPKHSVKVPDKSTLWEVEQNSAADGDGESHTT---LRWDNGQGLVFRLKFSLD 173 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y+F + V N++ + + + GRI + + + EG I G + L E Y Sbjct: 174 RAYMFSVSQEVENSTGEDLHLAYYGRINKAHAPDGKSYWISHEGAIGSFG-RGLQEWTYK 232 Query: 236 DIEKSSISNF--HE--SNSWLGISDKYWASVFIPSK---ETSFHSQFKYLSDGHARYQAK 288 D++K + HE + W+G++DKYW + +PS + +F ++ D +Q Sbjct: 233 DLQKENSIRVAAHEVAGSHWIGLADKYWFAALVPSSGGGKLAFRAK-HIPRDDVDHFQVD 291 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 FS + + G T LF GAKE + Y L IP F+ +D+G YFI KP+F Sbjct: 292 FSRSYGLVPAGGKAEATTQLFIGAKELAVLDDYRSKLNIPLFDKAVDFGILYFITKPVFR 351 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ YF+ +VGNFG+AI++ T+ +KL+ FPLA K YVS +K +QP+I ++E +K Sbjct: 352 LLQYFHKVVGNFGLAIIMLTISIKLVVFPLASKSYVSMFKLKKLQPEISRIKELYKTDDV 411 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 ++ K + L++ H ++P++G PIL+QIPVFFA+YKV+ +++EMRHAP WI+DL++ Sbjct: 412 RI-GKEISSLFRKHGVSPVSGFLPILVQIPVFFALYKVLFVTIEMRHAPLCAWIQDLSSQ 470 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAMILNWMPVVF 527 D N+ LFG+L F P + +G+ PII+ ++M +Q K++ A I+ ++P VF Sbjct: 471 DTANLLNLFGLLQFDPP--VCIGVLPIILGVTMVLQQKLNQQDQAAHDPYGIMKFLPYVF 528 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 VF SSFPAGL++YW SNVI+I+QQ + + Sbjct: 529 VFIFSSFPAGLVLYWICSNVITILQQLFVRR 559 >gi|5932359|gb|AAD56912.1|AF180145_4 60KD inner-membrane protein yidC [Zymomonas mobilis subsp. mobilis ZM4] Length = 579 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 173/511 (33%), Positives = 286/511 (55%), Gaps = 11/511 (2%) Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 Q L +PR+ + S+ GS+NLKG + DDL L + ++ NSP V L SP+ T+NA+F Sbjct: 65 QVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTENAWFT 124 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 + T N+ LPN++++W S K LT P+ + N + T+ +D Y+F Sbjct: 125 SFGW--TGENVALPNADSLWKADSDK-LTADHPVNFYWNNQQGQILRITLCVDHDYMFNA 181 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS-- 240 ++V N + P +++ + G I V ++DI+K+ Sbjct: 182 TESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADIDKATN 241 Query: 241 -SISNFHESNSWLGISDKYWASVFIP-SKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 SI N + W+G SDKYW + P +++ + + F+ S+ H YQA F+ + + Sbjct: 242 NSIRN-NTQGGWIGFSDKYWLTALAPHNQKIAIDTDFRSSSNHH--YQADFTVAPVVVAA 298 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 GK+ +T+ +FAGAKE + Y L +P F+ IDWGWF I K F + + + VG Sbjct: 299 GKTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFLHVG 358 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+L ++ L FP+A KQY S A+M+ +QPK+ +RE++K ++ Q+ ++ L Sbjct: 359 NYGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEARMRQE-LVTL 417 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y+ +NP AGC P+ +Q P+F A+YK + +++E RH PF WIKDL+A DP F LFG Sbjct: 418 YQKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFNLFG 477 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 +L F P F+ +G+ PII+ ++M++Q + SP + Q I++++P++ V ++ AGL Sbjct: 478 LLHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLAAGL 537 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 +Y+ ++N+IS+ Q + H DR Sbjct: 538 QVYYIFNNLISLAQMMWLQHRHSTPEERQDR 568 >gi|329114454|ref|ZP_08243216.1| Inner membrane protein OxaA [Acetobacter pomorum DM001] gi|326696530|gb|EGE48209.1| Inner membrane protein OxaA [Acetobacter pomorum DM001] Length = 594 Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 178/567 (31%), Positives = 319/567 (56%), Gaps = 25/567 (4%) Query: 9 VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM- 67 +A LS ++++ + Y +P+ + + ++ + V P + AA + +A+A + Sbjct: 19 LATLLSALVLFGYD--YFFPQHQLVPPAQQGVHAVAPPAPASSGAAAPAENTQAEAAAPV 76 Query: 68 ----SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE 123 RV + P++ G++NL+GA+ DDL L+ Y V +SP V +L+ ++T +A + + Sbjct: 77 KDGPETRVAINAPAVQGTLNLRGARLDDLVLKHYRETVKPDSPDVRVLNSAST-HADYVD 135 Query: 124 LDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 + + ++ ++ LP++NT+W SG + P+ L + N + F+ +S+D++Y+F I Sbjct: 136 FGWRAPSDVSVRLPDANTLWK-ASGTQMDAEHPLTLSWDNGQGLTFDIRLSVDQNYMFTI 194 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 V N++ + P R+ R T V EG I+V+ D L E Y + + Sbjct: 195 SQQVHNSTGQAVALYPFYRVNRGYTPEETGGMLVHEGPISVI-DGRLNEGSYKTVRTGGV 253 Query: 243 S------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE-IT 295 + + W GI+DKYW +P + + + + + YQ F+A + Sbjct: 254 PPDNIAWSHQGTGGWAGITDKYWLMAVLPDQNANVIGTYGFQA-AQGAYQVGFTATAPVQ 312 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G++ +T +FAGAKE + YEKDL +P F +D+GW F+ +P+F ++ + Sbjct: 313 VAAGQTASTEAHVFAGAKEVRLLEQYEKDLHVPMFWKAVDFGWLSFLTRPVFFVLDWLNE 372 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +G+FG+A++ TV VK+ F PL KQ T ++P++D +R + K P +Q+ + Sbjct: 373 HLGSFGLALLTFTVIVKVAFLPLTIKQMRMTWKTARLKPQVDLIRSRLKDDP-MAMQQQI 431 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY+ N+N G P+L+Q PVF+ +YK + +++EMRHAPF GW+KDL+A DPTN+F Sbjct: 432 MALYRQENVNLFGGFLPLLIQAPVFWCLYKDLYVTIEMRHAPFVGWVKDLSAPDPTNLFN 491 Query: 476 LFGILPF---YLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFA 530 LFG++PF ++ F+ +G WPI+ ++F+ K+S A D Q ++ ++P++F F Sbjct: 492 LFGLIPFDPTHITPFLALGAWPIMYGATLFLMQKVSSSSANMDPSQQKVMMFIPLLFTFF 551 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ P GL+IY+ WSN+++ VQQ VI+ Sbjct: 552 MARQPVGLVIYYCWSNILTAVQQVVII 578 >gi|258541762|ref|YP_003187195.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-01] gi|256632840|dbj|BAH98815.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-01] gi|256635897|dbj|BAI01866.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-03] gi|256638952|dbj|BAI04914.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-07] gi|256642006|dbj|BAI07961.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-22] gi|256645061|dbj|BAI11009.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-26] gi|256648116|dbj|BAI14057.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-32] gi|256651169|dbj|BAI17103.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654160|dbj|BAI20087.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-12] Length = 583 Score = 323 bits (827), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 166/501 (33%), Positives = 290/501 (57%), Gaps = 18/501 (3%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 RV + P++ G++NL+GA+ DDL L+ Y V +SP V +L+ ++T +A + + + + Sbjct: 72 RVAINAPAVQGTLNLRGARLDDLVLKHYRETVKPDSPDVRVLNSAST-HADYVDFGWRAP 130 Query: 130 AN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN 188 ++ ++ LP++NT+W SG + P+ L + N + F+ +S+D++Y+F I V N Sbjct: 131 SDVSVRLPDANTLWK-ASGTQMDAEHPLTLSWDNGQGLTFDIRMSVDQNYMFTISQQVHN 189 Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS----- 243 ++ + P R+ R T V EG I+V+ D L E Y + + Sbjct: 190 STGQAVALYPFYRVNRGYTPEGTGGMLVHEGPISVI-DGRLNEGSYKTVRTGGVPPDNIA 248 Query: 244 -NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE-ITILPGKS 301 + + W GI+DKYW +P + + + + + YQ F+A + + G++ Sbjct: 249 WSHQGTGGWAGITDKYWLMAVLPDQNANVIGTYGFQA-AQGAYQVGFTATAPVQVAAGQT 307 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 +T +FAGAKE + YEKDL +P F +D+GW F+ +P+F ++ + +G+FG Sbjct: 308 ASTEAHVFAGAKEVRLLEQYEKDLHVPMFWKAVDFGWLSFLTRPVFFVLDWLNEHLGSFG 367 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +A++ TV VK+ F PL KQ T ++P++D +R + K P +Q+ ++ LY+ Sbjct: 368 LALLTFTVIVKVAFLPLTIKQMRMTWKTARLKPQVDLIRSRLKDDP-MAMQQQIMALYRQ 426 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 N+N G P+L+Q PVF+ +YK + +++EMRHAPF GW+KDL+A DPTN+F LFG++P Sbjct: 427 ENVNLFGGFLPLLIQAPVFWCLYKDLYVTIEMRHAPFVGWVKDLSAPDPTNLFNLFGLVP 486 Query: 482 F---YLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFPA 536 F ++ F+ +G WPI+ ++F+ K+S A D Q ++ ++P++F F ++ P Sbjct: 487 FDPTHITPFLALGAWPIMYGATLFLMQKVSSSSANMDPSQQKVMMFIPLLFTFFMARQPV 546 Query: 537 GLIIYWSWSNVISIVQQAVIM 557 GL+IY+ WSN+++ VQQ +I+ Sbjct: 547 GLVIYYCWSNILTAVQQVIII 567 >gi|117927031|ref|YP_867648.1| protein translocase subunit yidC [Magnetococcus sp. MC-1] gi|166975874|sp|A0LE49|OXAA_MAGSM RecName: Full=Inner membrane protein oxaA gi|117610787|gb|ABK46242.1| protein translocase subunit yidC [Magnetococcus sp. MC-1] Length = 556 Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 182/509 (35%), Positives = 279/509 (54%), Gaps = 44/509 (8%) Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 LI+ A++L + KN + GS++L+G + ++ H DV PI + + S Sbjct: 78 LINTDAKSL-----LHFKNDLVEGSLSLQGGRLVGMDFL-QHTDVLGGKPI-SFMGISQV 130 Query: 117 KNAYFAELDYVSTANN-IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + +++ E ++ A + I+ P++NT W LI + L KLV+ N I+FE+ S Sbjct: 131 E-SFYQESGFLPVAGSAIKAPDANTQWQLIGKESLQGAGEFKLVWDNGEGIVFEKLFSFA 189 Query: 176 E-HYLFKIVDTVTNNSIDQI---RFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 + YLFK+ D + NNS + +S RI Q+ Q + G++ + Sbjct: 190 QGSYLFKVEDRLINNSAAALGVYHYSQFKRIPVINSQSMLAMSDFQGPMAYLNGER--YQ 247 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK--YLSDGHARYQAKF 289 Y D+ + W G SDKY+ + + +K +Q + Y Y+ Sbjct: 248 HSYEDLTAQDLRE-KGHGGWTGFSDKYFLAAMV-AKPLPPEAQPRRYYFDYDRPNYRVGM 305 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 N + I G+S+ LF G KE T+ L E ID+GWF+F+A+P+ + Sbjct: 306 VENSVIIPAGQSLAVDYDLFIGPKEISTLERSNLSL-----ERSIDYGWFHFLAEPLVKV 360 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +++F ++V N+G+AI+L T+ +KLLFFPLA K Y S MK +QPKI+EL+ K S Sbjct: 361 LNFFNSVVHNYGVAIILLTLAIKLLFFPLANKSYRSMNAMKKLQPKIEELK-KLHGSDRN 419 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +AM++LY+TH +NPL GC PIL+QIPVFFA+YKV+ +S+EMRHAPF WI DL+A D Sbjct: 420 KMNEAMMKLYQTHKVNPLGGCLPILVQIPVFFALYKVLFLSVEMRHAPFMLWIPDLSAMD 479 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PFY + P++M SMF+Q K++P P+D QA I+ ++PV+F Sbjct: 480 -----------PFY--------VLPLLMGGSMFLQSKLNPTPSDPMQAKIMMFLPVIFTV 520 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 SFP+GL++YW +NV+SI QQ IMK Sbjct: 521 MFLSFPSGLVLYWLVNNVLSISQQYYIMK 549 >gi|218461068|ref|ZP_03501159.1| putative inner membrane protein translocase component YidC [Rhizobium etli Kim 5] Length = 341 Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 136/338 (40%), Positives = 192/338 (56%), Gaps = 16/338 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ---------------TVKQ 45 ME N NYF+AIALSV+IV WQ Y+ PRIE ++ + T Sbjct: 1 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGTTPA 60 Query: 46 PNQ-VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 P S A QAL+ +PRV + P+L GSINL GA+ DDL L+GYH V + Sbjct: 61 PTSGTAPSGQAAATATLEQALAKNPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDS 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SPI+TL SP+ TK+ YF EL Y+ + +P ++T+W G LT TP+ L + N Sbjct: 121 SPIITLFSPAETKDGYFTELGYIGSDATGAVPGASTLWTAPEGAKLTEKTPVTLSYTNDK 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F + D + N + S GR+ R+ T + + + EGFI V+ Sbjct: 181 GLTFTRTISVDERYMFTVADKIENTGQAPVSLSSYGRVTRYNKPTTPSVYVLHEGFIGVI 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD LVE KYS +EK ++ + WLGI+DKYWA+ +P + +++ ++F + +DG R Sbjct: 241 GDDGLVETKYSAVEKEAVMPAKSTGGWLGITDKYWAATIVPPQTSAYEARFSHFADGQPR 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 YQA + + T+ PG+SI N +FAGAKE P I YE Sbjct: 301 YQADYKDDAFTVAPGQSIELKNLVFAGAKEVPVIDGYE 338 >gi|99034074|ref|ZP_01314196.1| hypothetical protein Wendoof_01001014 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 341 Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 140/338 (41%), Positives = 212/338 (62%), Gaps = 10/338 (2%) Query: 222 AVLG--DKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYL 278 VLG D L E Y DI K + S +W G +DKYW + IP K + K+ Sbjct: 7 GVLGAFDNKLEEWTYKDISKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHT 66 Query: 279 S-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + + ++Q F +ILPG S++ N+ FAGAK+ + Y+ L IP F+ +D+G Sbjct: 67 NVNNTDKFQVDFVKPYKSILPGASVSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFG 126 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL L + Y+S +K++QP++ Sbjct: 127 VLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLSLFNRSYISMFKVKSLQPELT 186 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ++E +K + K I L+K +N+NP++ +P+L+QIPVFFA+YKV+ +++EMRHAP Sbjct: 187 RIKELYKNDSLKQ-HKETIALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAP 245 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---PADK 514 F+ WIKDL+A DPTNIFTLFG+ + P + +GI PII +M IQ K+S D Sbjct: 246 FFLWIKDLSAPDPTNIFTLFGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKDQTSKDD 303 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 Q ++ ++P + VF SSFPAGL+IYW +SN+I+++Q Sbjct: 304 IQVNVMKFLPYISVFIFSSFPAGLVIYWIFSNIITLIQ 341 >gi|118582022|ref|YP_903272.1| 60 kDa inner membrane insertion protein [Pelobacter propionicus DSM 2379] gi|166975879|sp|A1AV44|OXAA_PELPD RecName: Full=Inner membrane protein oxaA gi|118504732|gb|ABL01215.1| protein translocase subunit yidC [Pelobacter propionicus DSM 2379] Length = 542 Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 132/335 (39%), Positives = 198/335 (59%), Gaps = 19/335 (5%) Query: 226 DKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 D SL K D+ SS S ++ N W G +DKY+ + + E + + +G Sbjct: 223 DNSLESDKLKDV--SSASKLYDKNLQWSGFADKYFLTAIL--SEGGSIASVELRKNGAGF 278 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 ++ S+ IT+ PG+S+T + LF G K+ + L E +D GWF IAK Sbjct: 279 LESTVSSPRITVTPGQSVTVVHRLFVGPKDIDILKAQGNSL-----EQSLDLGWFTVIAK 333 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+ + YFY VGN+G+AI++ T+ +K LFFPL K Y S +M+ IQP + L+EK+K Sbjct: 334 PLLYTLKYFYRYVGNYGVAIIIITIILKALFFPLTHKSYKSMKDMQKIQPMMAALKEKYK 393 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 + + KA+++LY+ H +NPL GC P+L+QIPVFFA+YK + S+E+RHAPF+ WI D Sbjct: 394 DDR-EGMNKAVMELYRDHKVNPLGGCLPMLVQIPVFFALYKALMFSIELRHAPFYFWITD 452 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ P N+F LPF +G P++M +MFIQ KM+P D QA ++ +P Sbjct: 453 LSG--PDNLFGQMLGLPFV------IGPLPLLMGATMFIQQKMTPSTMDPMQAKMMLALP 504 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 VVF F +FP+GL++YW +N+++I QQ I K+ Sbjct: 505 VVFTFMFLNFPSGLVLYWLLNNILTIGQQMYINKL 539 >gi|308273509|emb|CBX30111.1| hypothetical protein N47_D29200 [uncultured Desulfobacterium sp.] Length = 551 Score = 239 bits (610), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 171/575 (29%), Positives = 281/575 (48%), Gaps = 49/575 (8%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-----YAAVLIDDR 61 + +A+ALS I+ W FY + + E +NI + P VDN + DD Sbjct: 6 FIIAVALSFIVFLGWDYFYNDKKPAKQITEVQNIDKRQSP--VDNKNINPPEKSSQSDDT 63 Query: 62 AQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP---SNTK 117 + RV E+ P IN K A L+ Y+ + +SP L+ + T Sbjct: 64 VFQENKPLRVFEINTPLYSVKINEKNAAITSFKLKKYNETIDVDSPKKELIPKDLNTGTV 123 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-E 176 F E N +SN NL+ + + IK +K+ ++ E+ + Sbjct: 124 IVGFDEKSVHGIENATYTADSNAAANLVLDQ---GSKEIKFYWKSPEGVIIEKKYKFSAD 180 Query: 177 HYLFKIVDTVTNNSI----DQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 YL + V N S D++ S M +K +TN+F EG A++ Sbjct: 181 TYLIGLKLNVLNQSSQSIKDRLFVSIESYNMSNK---STNSF---EGPSALIN------- 227 Query: 233 KYSDIEKSSISNFHESNS------WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 +E+ + N E NS W+ I D+Y+ S IP + + + ++ Sbjct: 228 --GSLEQIKLKNIEEKNSYPGNIKWVAIQDRYFMSAIIPVTPVEANMRLYMKAKDKGYFE 285 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 +++ E I PG+ L+ G K + DL +++GWF F+AKP+ Sbjct: 286 EQYTLPEKEIRPGEQEEKEFKLYFGPKSLKLLGSLGYDL-----NKAVNFGWFDFLAKPV 340 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 M++ Y+ + N+G+ I+L T+F K++F+PL K Y S MK IQP + EL+EK+ Sbjct: 341 LYAMNFLYSFIPNYGVVIILLTIFFKIIFWPLGSKSYKSMNEMKKIQPLLAELKEKYGND 400 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + + + ++ LYKT+ INP+ GC P++ Q+PVFFA Y+++ ++E+RHAPF WIKDL+ Sbjct: 401 KKR-MNEELMGLYKTYKINPMGGCLPMVAQLPVFFAFYRMLYETIELRHAPFVFWIKDLS 459 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 A P +F +PF P + + + I+M +MFIQ KM+P D QA ++ ++P+V Sbjct: 460 A--PDRLFHFAFTIPFMEPPY-GIPVLTIVMGATMFIQQKMAPAVGDPAQAKMMMFLPLV 516 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F +F AGL++YW +NV+SI+QQ +I + + Sbjct: 517 FTVIFINFSAGLVLYWLVNNVLSILQQNIISRKNA 551 >gi|222056914|ref|YP_002539276.1| YidC translocase/secretase [Geobacter sp. FRC-32] gi|254772789|sp|B9M7R9|OXAA_GEOSF RecName: Full=Inner membrane protein oxaA gi|221566203|gb|ACM22175.1| YidC translocase/secretase [Geobacter sp. FRC-32] Length = 530 Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 132/340 (38%), Positives = 199/340 (58%), Gaps = 29/340 (8%) Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G + + GDK ++ K SDI K F + SW +DKY+ I K + ++ + Sbjct: 216 GPVTMAGDK-VITDKVSDIAKGP-KQFDNNVSWSAFADKYFMDAVIAVKNSIASARVAKI 273 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 SD + Q +++ +++ PG+S + LF G K+ + R E ID+GW Sbjct: 274 SDNYV--QTNVTSSPLSLNPGQSASMDYRLFYGPKDLDILKAQGS-----RLEEAIDFGW 326 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F +AKP+ + +FY+ N+G+AI++ T+ +K+LFFPL K Y S M+ +QPK+ E Sbjct: 327 FSALAKPLLRSIKFFYSYTHNYGLAIIIITIILKVLFFPLTHKSYKSMKEMQKLQPKMVE 386 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+EKFK + +A++ LYKTH +NP+ GC P+L+QIPVFFA+YK + S+E+RHAPF Sbjct: 387 LKEKFKNDR-DAMNRAVMDLYKTHKVNPMGGCLPMLVQIPVFFALYKALMFSIELRHAPF 445 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DL+A D P+Y + PIIM ++MFIQ KM+P D QA Sbjct: 446 VLWITDLSAKD-----------PYY--------VTPIIMGVTMFIQQKMTPTNMDPIQAK 486 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ +PVVF F +FPAGL++YW +N+++I QQA I K Sbjct: 487 MMLALPVVFTFMFLNFPAGLVLYWLINNILTIAQQAYINK 526 >gi|95929982|ref|ZP_01312722.1| 60 kDa inner membrane insertion protein [Desulfuromonas acetoxidans DSM 684] gi|95133951|gb|EAT15610.1| 60 kDa inner membrane insertion protein [Desulfuromonas acetoxidans DSM 684] Length = 527 Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 169/568 (29%), Positives = 290/568 (51%), Gaps = 57/568 (10%) Query: 3 RNWNYFVAIALSVIIVYAWQNF-YVYPRIEEMNNE-----RKNIQTVKQPNQVDNSYAAV 56 N N VA+ L +I+ W F +++P E + + + +++KQ VD + V Sbjct: 2 ENKNTLVALILMLIV---WTGFTFLFPPSENQSPDSEVTAKAEDKSLKQDISVD-AQTVV 57 Query: 57 LIDDRAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 I + + S R + +N +I++ + DL L+ Y D+ ++S +V+LL S+ Sbjct: 58 DIQNNISNVKTSDRFITFENDVFEATISVSTSTLVDLKLKDYKRDIDNDSDLVSLLDKSD 117 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA--NNILFERTIS 173 L Y + +L N+ + + +++ F + N + +R I Sbjct: 118 D----IKSLVYYGNNDFSQLSNALFNTKITDDHVFVSQDSLQVDFYSTVDNFEINKRYIF 173 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 Y F IV ++ N S D S G ++ + ++ + +G + + Sbjct: 174 YKNKYDFDIVYSLKNISSD----SRNGNVVLSLSNFWSE--DIKGNRLEFVGPVYFSDDE 227 Query: 234 YSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR--YQAKFS 290 + I+ I+N SN +W G +KY+ S I + +F L H Q Sbjct: 228 LNTIDVEDINNDVYSNIAWSGFENKYFFSALIG------NDKFSNLLVKHQNNYVQTNLI 281 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + ++TI G+ + +F G K+ + + +L ++D+G+F +AKP+ ++ Sbjct: 282 STDLTISNGQQLDFKTKVFYGPKDVQILKGVDDNLV-----RVVDYGFFKILAKPLHTVL 336 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++FY +GN+G +I+L TV +K+LF+PL +K YVS M+ IQP++ +LREK+ + Sbjct: 337 NFFYGYIGNYGFSIILLTVIIKMLFWPLTQKSYVSMKAMQKIQPEMKKLREKYGNDR-ES 395 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 L + M++LY+ H +NPL GC P+L+QIPVFFA+YKV+ ++E+RHAPF WI DL+ D Sbjct: 396 LNRKMMELYREHRVNPLGGCLPMLVQIPVFFALYKVLLGTIELRHAPFIFWITDLSVKD- 454 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 P+Y I P++M L+MFIQ K++P D QA ++ MPVVF F Sbjct: 455 ----------PYY--------ITPLVMGLTMFIQQKLTPNTMDPMQAKMMLAMPVVFTFL 496 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +FPAGL++YW +N+++I QQ +I K Sbjct: 497 FLNFPAGLVVYWLVNNLLTIFQQYLIYK 524 >gi|300313620|ref|YP_003777712.1| inner-membrane transmembrane protein [Herbaspirillum seropedicae SmR1] gi|300076405|gb|ADJ65804.1| inner-membrane transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 542 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 161/484 (33%), Positives = 253/484 (52%), Gaps = 28/484 (5%) Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 SI+ G + L L DV + V L S + Y AE + PN T Sbjct: 73 SIDTVGGELKRLELL-KQPDVVDPTKNVVLFD-SEPGHMYLAESGLIGG----PFPNHKT 126 Query: 141 VWNLISG-KILTPTTPIKLVF-KNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFS 197 ++ +G + L I+LV + + +T + + YL + TVTN + I S Sbjct: 127 IFTAQAGPRTLDNGNEIQLVLVADQGGVKLTKTYTFKRDSYLIDVKHTVTNTTGAAINPS 186 Query: 198 PRGRIMR--HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGI 254 +++R +KP ++ + G + + + I + +++ N W+ + Sbjct: 187 LYLQLVRDGNKPGGESHFYSTFTGPAVYSNSEHFEKLDFEKIANGKQQHVNKTDNGWIAM 246 Query: 255 SDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE 314 Y+ S FIP + K + D Y T+ P S+T + L++G Sbjct: 247 VQHYFVSAFIPPQNAQRDVFSKKVGDN--LYAVGSILPLGTVAPNASVTMDSQLYSG--- 301 Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374 PT+ + +A P +++ D+G IA+P+F LM++ +N+VGN+G I+L TV +KL+ Sbjct: 302 -PTVSKTLQAIA-PGLDLVRDYGHLTVIAEPIFWLMTHIHNIVGNWGWTIILLTVLIKLI 359 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 FFPL+ Y S A MK + PK+ +RE+ K P Q + + M+ LYKT INPL GC PI Sbjct: 360 FFPLSAASYRSMAKMKAVSPKMQAIRERHKGDP-QAMNREMMTLYKTEKINPLGGCLPIA 418 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +QIPVF A+Y V+ S+EMR AP+ GW+ DL A D LFG +P++ M +G+ P Sbjct: 419 IQIPVFIALYSVLLASVEMRGAPWLGWVHDLTAPD-----RLFGTIPYF---NMPIGLLP 470 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 IIM+ SMF+Q K++P P D QA ++ +MP+VF F FP+GL++YW +N++SI QQ Sbjct: 471 IIMAASMFLQTKLNPTPPDPVQAKVMMFMPLVFSFMFFFFPSGLVLYWVTNNILSIAQQW 530 Query: 555 VIMK 558 VI + Sbjct: 531 VITR 534 >gi|332286192|ref|YP_004418103.1| putative inner membrane protein translocase component YidC [Pusillimonas sp. T7-7] gi|330430145|gb|AEC21479.1| putative inner membrane protein translocase component YidC [Pusillimonas sp. T7-7] Length = 565 Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 157/489 (32%), Positives = 254/489 (51%), Gaps = 34/489 (6%) Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145 GAQ L Y S + P+V LL S+T + Y A+ + N P T + L+ Sbjct: 106 GAQLVKAELVKYTAPGSKDQPMV-LLDNSST-STYLAQTGVIGAPNGQSYPTHLTPFKLV 163 Query: 146 SGKILTPTTPIKLVFK-NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM 203 S + + +VF+ A+ + +T +L + Y + + N + I S +++ Sbjct: 164 SSETSLTGDTLDIVFEAQADGVKVVKTYTLHKGRYDIDVKHDIYNLGTEPITPSLYLQLV 223 Query: 204 R--HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWA 260 R + P +++ + G + + +SDI+K S ++ N W+G+ Y+A Sbjct: 224 RDGNDPSDSSSFYSTFTGPALYSAGEKFQKITFSDIDKGKASYTQQADNGWIGMVQHYFA 283 Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 S +IP++ T H++ LS+ ++ SA I PG++++ L+ G P Sbjct: 284 SAWIPAQGTVRHNETLRLSNNLYAIRSIESAGAIQ--PGQNVSVEANLWVG----PQDQK 337 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 +LA P E+++D+GW IAKP+F +M++ + L+GN+G I+ T +KL+F+PL+ Sbjct: 338 AMGELA-PGLELVVDYGWLTIIAKPLFKIMTWLHALLGNWGWTIVALTFLIKLVFYPLSA 396 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 Y S A MK + P++ LREKF + L AM+++Y+T INPL GC P+++QIPVF Sbjct: 397 ASYRSMAKMKQVTPRLQALREKFGDDKAK-LNAAMMEMYRTEKINPLGGCLPMVVQIPVF 455 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 ++Y V+ S+EMR AP+ WI+DL+ DP F LP FM + Sbjct: 456 ISLYWVLLGSVEMRGAPWILWIQDLSVRDPW----------FILPAFMMA---------T 496 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 MF+Q+K++P P D QA I+ MP+VF + FPAGL++YW +N +SI QQ IM Sbjct: 497 MFLQIKLNPTPPDPTQAKIMMIMPLVFGGMMFFFPAGLVLYWCVNNAVSIAQQRYIMHKL 556 Query: 561 GAEIGLIDR 569 E R Sbjct: 557 DKETAAAKR 565 >gi|254515874|ref|ZP_05127934.1| 60 kDa inner membrane insertion protein [gamma proteobacterium NOR5-3] gi|219675596|gb|EED31962.1| 60 kDa inner membrane insertion protein [gamma proteobacterium NOR5-3] Length = 586 Score = 233 bits (593), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 148/500 (29%), Positives = 253/500 (50%), Gaps = 46/500 (9%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE-----L 124 V++ SL +I+L G ++ L + ++ +P V L +N++ Y A+ Sbjct: 112 VQVYTDSLQVAIDLNGGDIVEVALAKFLAEIDDPETPFVLL--ENNSRRVYVAQSGLIGR 169 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFKIV 183 D + + + + T ++L S L + L++ N + + + + Y+ + Sbjct: 170 DGIDSKSRATYRTAQTRYDLGSADSLQ----VDLLWSNDEGVKVTKRFNFQRDSYVVDVE 225 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNT---FGVQE--GFIAVLGDKSLVEQKYSDIE 238 + N S +Q + + G+I R TN G+Q G D + + ++ Sbjct: 226 FIIDNQSGEQWQGNLFGQIKRDSSAAVTNGGGGMGMQPFLGAATTTADDRFKKFSFDNMR 285 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 K H S W+ + Y+ S +IP+ E + + + G A F++ I + P Sbjct: 286 KEPFREQH-SGGWIAMIQHYFLSAWIPAPEQTHTYSTRVTNSGFNI--AGFTSPAINVDP 342 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G + + +AG K+ Y P E+ +D+GW +++A+P+F L++ Y+LVG Sbjct: 343 GSTREVSARFYAGPKD-----QYSLQEISPYLELSVDYGWLWWVAQPLFWLLTKIYSLVG 397 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G AI+L TV +K +FF L+ Y S ANM+ +QPK+ ++RE++ Q +AM++L Sbjct: 398 NWGAAIILLTVLIKAVFFKLSATSYKSMANMRRVQPKMADIREQYADD-KQKQSQAMMEL 456 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y+ INP+ GC PIL+Q+PVF A+Y ++ S+E+R APF WI DL+ DP + Sbjct: 457 YRKEKINPMGGCLPILVQMPVFIALYWMLMESVELRQAPFMLWINDLSVMDPYFVL---- 512 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 P++M SMF K++PPP D QA I+ W+PV+F F FPAGL Sbjct: 513 ---------------PLMMGASMFFMQKLNPPPPDPMQAKIMQWLPVIFTFFFLWFPAGL 557 Query: 539 IIYWSWSNVISIVQQAVIMK 558 ++YW +N++S+ QQ VI + Sbjct: 558 VLYWVVNNLLSMAQQYVITR 577 >gi|301064543|ref|ZP_07204939.1| putative membrane protein [delta proteobacterium NaphS2] gi|300441291|gb|EFK05660.1| putative membrane protein [delta proteobacterium NaphS2] Length = 551 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 163/562 (29%), Positives = 275/562 (48%), Gaps = 32/562 (5%) Query: 9 VAIALSVIIVYAWQNFYVYPRIEEMNNER--KNIQTVKQPNQVDNSYAA----VLIDDRA 62 +A ALS +I+ W F+ +E E +++Q + + V S AA + ++ Sbjct: 7 LAFALSFVILVGWSLFFAPQPKKEPPKESSPESVQPEHEKSSVTISPAAPSKTIAAVEQP 66 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 R+++ P + G L+ Y V+ SP V +++ Y Sbjct: 67 TVQQEEKRIKIDTPLYSAVFSNVGPTIKSFKLKKYRQTVNPESPFVEMVTLEEGMGDYLT 126 Query: 123 EL--DYV-STANNIELPNSNTVWNLISGKILTPTTPIKLVFK--NANNILFERTISLD-E 176 L D + ++ NI L G + P +VF+ N N I +T + Sbjct: 127 ILFDDSIDASTQNIAFSADKESLTLQQG-----SEPATIVFRGTNRNGIAITQTYRFHPD 181 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y + T N + + R +R P + GF L DK L E + D Sbjct: 182 RYGIDLAVTAVNPNTVTVNGVFR-TTLRALPPKDKGGYYAYVGFALFLDDK-LDELEVED 239 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 ++ + + W+ D Y+ S +P K+LS G ++ + +++ Sbjct: 240 PGETKSAT--GTIGWICYEDNYFISAVVPEVPAKGSFTGKHLSSG--VFEGVYLPAAVSL 295 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 P T+ L+ G ++ + + K+L + I++GW IAKP+ ++ +F Sbjct: 296 PPSAQATSEYELYLGPRDLSILKKFGKNL-----DKAINFGWTDIIAKPLLYVLKFFDAY 350 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + N+G++I+L T+ VK+LF+PL K Y S M+ +QP++ +LREK+K Q L + M+ Sbjct: 351 LHNYGVSIILLTILVKILFWPLTHKSYKSMKEMQKLQPRMAKLREKYKGDK-QKLNQEMM 409 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYKT+ +NP+ GC P+++QIPVFFA+++V+ +E+RHAPF WI DL+A P +F Sbjct: 410 ALYKTYKVNPMGGCLPMVVQIPVFFALFRVLGACIELRHAPFIFWINDLSA--PDRLFHF 467 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 +PF P + + + ++M SMFIQ KM+P P D QA I+ ++PV+F F +FP+ Sbjct: 468 SFQIPFMAPPY-GIPVLTLLMGASMFIQQKMTPSPGDPAQAKIMMFLPVIFTFMFINFPS 526 Query: 537 GLIIYWSWSNVISIVQQAVIMK 558 GL++YW +N++SI QQ I K Sbjct: 527 GLVLYWLVNNLLSIGQQYRIYK 548 >gi|114778885|ref|ZP_01453682.1| 60 kDa inner membrane insertion protein [Mariprofundus ferrooxydans PV-1] gi|114550854|gb|EAU53420.1| 60 kDa inner membrane insertion protein [Mariprofundus ferrooxydans PV-1] Length = 435 Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 148/476 (31%), Positives = 241/476 (50%), Gaps = 48/476 (10%) Query: 89 FDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK 148 F + L+ YH+ + + V++LS ++ + + S N + TV N S Sbjct: 7 FTEAELKQYHVSIEPGAANVSVLSMTDEGRSVYVN----SGVMNRSIQKPFTVLNK-SAN 61 Query: 149 ILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 +T + N ++++R I+L + Y+ I D + + +I +++ P Sbjct: 62 TMTLQATLD------NGLIWQRKITLAQDSYIVDIEDRILGGAGQKIY----RQVVERDP 111 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 NTF G A+L K L E Y D++ SS+ W I ++Y+ + I + Sbjct: 112 DKKLNTFYEHMGPTALLNGK-LQEPDYKDLDSSSV-RMMAVGGWTAIMNRYFIAALISNP 169 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 E + FK DG + YQA + L GK + +F G K + + L Sbjct: 170 EQDYPYYFK--GDGRS-YQA--GVIDSGTLDGKDNLFHSRMFLGPKSLTVLKKAGEGL-- 222 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + I++GWF FI+KPM + + Y VGNFG I+L + +K+LFF +K Y S A Sbjct: 223 ---DRSINYGWFAFISKPMHSFLLWLYTYVGNFGFCIILLVLSIKILFFWPTQKSYESMA 279 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ +QP++ ++E + Q + + M+ LYK H +NP+ GC PI++QIPVFFA+YKV+ Sbjct: 280 AMRKLQPEMARMKELYGDDR-QKMSQEMMALYKKHKVNPMGGCLPIIIQIPVFFALYKVL 338 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 +S+EMR APF GWI D++ DP + P++M +SMF+Q ++ Sbjct: 339 LMSIEMRQAPFIGWIHDMSVQDPYFVL-------------------PVLMGISMFVQQRL 379 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P P D QA ++ ++P VF FPAGL++YW +N +SI+QQ ++MK E Sbjct: 380 NPTPPDPMQAKVMQFLPPVFTVLFLFFPAGLVLYWVVNNTLSILQQKLVMKRMNVE 435 >gi|224367782|ref|YP_002601945.1| OxaA [Desulfobacterium autotrophicum HRM2] gi|223690498|gb|ACN13781.1| OxaA [Desulfobacterium autotrophicum HRM2] Length = 557 Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 169/585 (28%), Positives = 279/585 (47%), Gaps = 58/585 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV-------YPRIEEMNNE-----RKNIQTVKQPNQ 48 M+ F AI LS++++ W F+V P ++NE + +I + P Sbjct: 1 MDDQKRLFTAIILSIVVIVGWNFFFVDSKPVPEKPDQAIVSNEQPMAGKGDIAPITDPAP 60 Query: 49 VDNSYAAVLIDDRAQ--ALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + D AQ A ++ R +++ N +I+ GA+ + L L Y Sbjct: 61 SQQTEI-----DAAQPPATAIPTRNARTIQVSNQFYNIAISETGAKVNSLTLNAYRETSE 115 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTAN------NIELPNSNTVWNLISGKILTPTTPI 156 +SP+ ++SP+ T + LD S + P+ NL GK + Sbjct: 116 KDSPLKEMVSPNLTGGLFGVSLDGKSIPGLETALFTAQTPSDQ--LNLDQGK-----KSL 168 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 + +A ++ E+ + D V NS + M P Sbjct: 169 TFTWTSAQGVVVEKIFTFSADSYLIGFDLVLKNSSG---MPMKDSFMVEIP----GIIDE 221 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISN---FHESNSWLGISDKYWASVFIPSKETSFHS 273 + + G +L+ K +I+ I+ + W G +D+Y+ S IP T Sbjct: 222 KNARFSFEGPTTLINDKLEEIKAKKIAEKDTYEGQIQWAGYTDRYFMSCLIPQAPTEAKV 281 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + + S ++ + + PGK +T + LF G K + Y +L + Sbjct: 282 KLSFDS---PVVTTRYVQSMERLDPGKQVTYSFSLFMGPKSLKLLSSYGNNL-----KKA 333 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I++GWF +AKP M M+ + L+ N+GIAIML T+ +KL+F+PL K Y S +MK +Q Sbjct: 334 INFGWFDILAKPCLMGMNLIHGLIPNYGIAIMLLTLLIKLIFWPLGTKSYRSMNDMKKLQ 393 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P + E+REK+K ++ Q+ M LYKT+ +NP++GC P+++Q+P+FFA+Y+++ ++E+ Sbjct: 394 PLMMEMREKYKGDKQRMNQEVM-GLYKTYKVNPMSGCLPMIVQMPIFFALYRMLYQAIEL 452 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 RHAPF WI DL+A P +F +PF + + + IIM +MF+Q KMSP D Sbjct: 453 RHAPFMWWINDLSA--PDRLFHFDFAIPFMQAPY-GIPVLTIIMGATMFLQQKMSPSTGD 509 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 QA ++ MP+ F +FPAGL++YW +NV+SI QQ I K Sbjct: 510 PTQAKMMMLMPLFMTFIFINFPAGLVLYWLVNNVLSIGQQYYIQK 554 >gi|319778792|ref|YP_004129705.1| Inner membrane protein translocase component YidC, long form [Taylorella equigenitalis MCE9] gi|317108816|gb|ADU91562.1| Inner membrane protein translocase component YidC, long form [Taylorella equigenitalis MCE9] Length = 549 Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 169/542 (31%), Positives = 269/542 (49%), Gaps = 40/542 (7%) Query: 21 WQNFYVYPRIEEMNNERKNIQ---TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPS 77 W N+ Y +N + Q T P+ NS A I + S ++ +K+ Sbjct: 20 WSNWKSYNNPAPLNTVTEQNQSPATPSVPSADTNSPATAPIKTNSVVSEDSEKITVKSDV 79 Query: 78 LIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPN 137 L + + GAQ +L +H P L K+ + + +S N + P Sbjct: 80 LNLTFDTVGAQLIKADLLKHHSAEDKALPTTLL---DFKKDIFTVQSGVLSQTPNKQFPI 136 Query: 138 SNTVWNLISGKILTPTTPIKLVFK-NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIR 195 T + +S ++F+ ++ I RT +L++ Y D ++N S + I Sbjct: 137 QTTQFKYVSTDENLSGDKKDIIFEAESDGIKVRRTYTLNKGSYDITFKDEISNLSSEAIS 196 Query: 196 FSPRGRIMRH--KPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHE-SNSW 251 +I R KP+ +T+ G+ AV +K E+ + DI+ S + S+ W Sbjct: 197 PIHYVQITRDGAKPKDSTSMTNSYWGY-AVYSEKEKFEKVPFKDIDDRSAEYVSKTSDGW 255 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 + Y+ + ++ K H +F+ G Y A S I P +++T ++ L+ G Sbjct: 256 ISFIQHYFVTAWVLEKGKEHHIEFR--KAGQNLYAASASQVLGAIAPQQTVTVSSHLWVG 313 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 ++ + P ++++GW FIAKPMF LMS+ L+GN+G I++ TV + Sbjct: 314 PQDQKALVKLH-----PNLNTVVNYGWLTFIAKPMFALMSWINTLIGNWGWTIVVLTVII 368 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 KLL +PL+ Y S A MKNI P++ L+E++ Q L AM+QLYKT INPL GC Sbjct: 369 KLLLYPLSATSYKSMARMKNISPRMKLLKEQYGDDK-QKLNAAMMQLYKTEKINPLGGCL 427 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 PILLQIP+F +Y+VI S+E+R A + GWI DL+A D P+Y Sbjct: 428 PILLQIPIFLTLYRVILSSVELRGASWIGWITDLSAQD-----------PYY-------- 468 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 I P +M L+MF+QM+M+P P D QA I+ MP+VF + FPAGL++YW+ ++++SI+ Sbjct: 469 ILPTLMILTMFLQMRMNPTPPDPTQAKIMMIMPLVFGAMMFFFPAGLVLYWTVNSLLSIL 528 Query: 552 QQ 553 QQ Sbjct: 529 QQ 530 >gi|319945014|ref|ZP_08019276.1| YidC/Oxa1 family membrane protein insertase [Lautropia mirabilis ATCC 51599] gi|319741584|gb|EFV94009.1| YidC/Oxa1 family membrane protein insertase [Lautropia mirabilis ATCC 51599] Length = 561 Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 156/519 (30%), Positives = 254/519 (48%), Gaps = 38/519 (7%) Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 P+Q N A + D+A+ + LKN + I+ G Q L H+ + N Sbjct: 63 PSQAGNDAPASVPADQAEQAKAGQTITLKNDVIELGIDTVGGQIVSSKLL-KHIHDTRNP 121 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 L+ S+ K ++F + + PN T ++ ++ Sbjct: 122 DSGNLVIQSDRKGSFF--VGQTGLVGVKDAPNHTTPMTVVRTIETDGQVTGVVLAAEGGG 179 Query: 166 ILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRI-MRHKPQTATNTFGVQEGFI-- 221 + ERT L Y K+ + VTN I + SP + + A G + ++ Sbjct: 180 LRIERTYQLSPGSYEIKVDNRVTN--IGEQPLSPSLYLQLTRDTHEAPGQSGYYKTYVGP 237 Query: 222 AVLGDKSLVEQ-KYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS 279 A+ D ++ + DIEK + +N W+GI Y+ S ++P + ++ Sbjct: 238 AIYTDADKFQKVSFDDIEKGKAKHSGRANDGWVGIIQHYFVSAWVPKQGQP--REYYTRR 295 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G + Y A I G+S+ + LF G ++ + P ++++D+GW Sbjct: 296 VGPSTYSAGAYEQLGQISAGQSVDASETLFIGPQDQDVLAK-----VAPGLDLVVDYGWL 350 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 IAKP+F L+++ + +VGN+G AI+ T+ VKL FFPL Y S A M+ +QP+++ + Sbjct: 351 TAIAKPLFWLLTFLHGIVGNWGWAIVALTILVKLAFFPLQAASYRSMAKMRKVQPRLNAI 410 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE++ L +AM++LYKT INPL GC PIL+QIPVF A+Y V+ S+E+R+AP+ Sbjct: 411 RERYGDDRMN-LNQAMMELYKTEKINPLGGCLPILVQIPVFIALYWVLLASVEIRNAPWI 469 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 GWI DL++ DP I PI+M+ +MF+Q ++P PAD QA + Sbjct: 470 GWIHDLSSPDPLYIL-------------------PILMAGTMFLQTHLNPKPADPVQAKM 510 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +MP++F FP+GL++YW SN+ SI QQ VI + Sbjct: 511 MTFMPLIFSVMFFFFPSGLVLYWVVSNIFSIAQQWVITR 549 >gi|254483195|ref|ZP_05096428.1| 60Kd inner membrane protein [marine gamma proteobacterium HTCC2148] gi|214036566|gb|EEB77240.1| 60Kd inner membrane protein [marine gamma proteobacterium HTCC2148] Length = 565 Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 157/506 (31%), Positives = 254/506 (50%), Gaps = 61/506 (12%) Query: 73 LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE--------L 124 ++ SL +I+L G +L L Y L+ N I +L N Y A+ + Sbjct: 93 VRTDSLQLAIDLNGGDIIELALPRY-LEEIDNPDIPFVLLEQNDSRTYIAQSGLIGSNGI 151 Query: 125 D------YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-H 177 D + ++A+N EL S+ T + L A+NI + + Sbjct: 152 DSKGRALFTASADNFELSESDD------------TLVVDLNLTTADNIKVTKRFTFTRGE 199 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSLVEQKY 234 YL +I V NNS + + + G+I R P + + G+Q A + + K+ Sbjct: 200 YLVEIDYIVVNNSNARWQANLFGQIKRDSTPAPSASQSGMGMQPFLGAAITQPDVRFTKF 259 Query: 235 SDIEKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + E F W+ + Y+ S +IP+ + S + + G A F++ Sbjct: 260 T-FEDMLDDPFKAQLPGGWIAMFQHYFLSAWIPNSDQSHNYSTRVTQAGFNI--AGFTSP 316 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 +T+ PG+S TT +AG K+ Y P ++++D+GW ++IAKP+F L++ Sbjct: 317 ALTLDPGQSGTTGAQFYAGPKD-----QYRLAEISPYLDLVVDYGWLWWIAKPLFWLLTN 371 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++ VGN+G AI+L TV VK FF L+ Y S A M+ +QP++ ++RE++ Q Sbjct: 372 IHSFVGNWGTAIILLTVVVKAAFFKLSATSYRSMARMRKVQPQMLDIREQYADD-KQKQS 430 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 +AM++LY+ +NP+ GC PIL+Q+PVF A+Y V+ S+E+RHAPF WIKD++ DP Sbjct: 431 QAMMELYRKEKVNPMGGCLPILVQMPVFIALYWVLMESVELRHAPFALWIKDMSVMDPYF 490 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 + PI+M SM+ +++PPP D QA I+ W+P+VF F Sbjct: 491 VL-------------------PILMGASMWFMQRLNPPPTDPMQAKIMQWLPIVFTFFFL 531 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N++S+ QQ VI K Sbjct: 532 WFPAGLVLYWVVNNLLSMAQQYVITK 557 >gi|332288922|ref|YP_004419774.1| putative inner membrane protein translocase component YidC [Gallibacterium anatis UMN179] gi|330431818|gb|AEC16877.1| putative inner membrane protein translocase component YidC [Gallibacterium anatis UMN179] Length = 540 Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 171/575 (29%), Positives = 275/575 (47%), Gaps = 85/575 (14%) Query: 15 VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS--------YAAVLIDDRAQALS 66 ++I + +F +Y + E ++N + QT Q QVD S A ID+ Q Sbjct: 8 LVIALLFISFLIYQQWE-IDNNPQPAQTATQ-TQVDKSEVPTTVSTAANTTIDNNQQQGK 65 Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-------------LSP 113 + + L++ L I+ G + L Y ++ S +P L L Sbjct: 66 I---ITLQSDVLRLKIDTLGGDIVEAQLLKYGAELHSETPFALLKNTPQQVYIAQSGLIG 122 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 +N + DY +N L ++ P T K + + + + + Sbjct: 123 ANGSDTVAGRADYQVEGDNFTLAEGQN-------ELSVPFTFTK------DGVTYRKIFT 169 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 L + Y K+ VTNNS I+ P + ++H ++ + + Sbjct: 170 LSRNSYDVKVNYEVTNNSGATIQVQPYAQ-LKHTLVESSGNIAMPTYTGGAYSSSETNYK 228 Query: 233 KYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKE------TSFHSQFKYLSDGHAR 284 KYS D++K +++ W I Y+ S +IP+++ TS F Y+ Sbjct: 229 KYSFEDMQKENLA-IKTKQGWAAILQHYFVSAWIPNQDADNQLYTSTQGDFAYIG----- 282 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 F +I G + T ++ L+ G K E + P ++ +D+GW +FIAK Sbjct: 283 ----FRGPVTSIANGATDTISSQLWVGPK-----LQNEMETVAPHLDLTVDYGWAWFIAK 333 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + +LV N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+RE+F Sbjct: 334 PLFWLLQFIQSLVHNWGLAIIGVTIVVKAILYPLTKAQYTSMAKMRMLQPKIQEMRERFG 393 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+D Sbjct: 394 DD-RQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQD 452 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+A D P+Y I P++M SMF+ KMSP P AD Q ++ +M Sbjct: 453 LSAQD-----------PYY--------ILPLLMGASMFLLQKMSPTPVADPMQQKVMMFM 493 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 PV+F F FP+GL++YW SN+I+IVQQ +I + Sbjct: 494 PVMFTFFFLWFPSGLVLYWLVSNLITIVQQQLIYR 528 >gi|113869679|ref|YP_728168.1| putative inner membrane protein translocase component YidC [Ralstonia eutropha H16] gi|123133468|sp|Q0K5C1|OXAA_RALEH RecName: Full=Inner membrane protein oxaA gi|113528455|emb|CAJ94800.1| inner membrane protein [Ralstonia eutropha H16] Length = 555 Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 163/504 (32%), Positives = 250/504 (49%), Gaps = 54/504 (10%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 +V + ++ I+ G L L H + V L N + Y A + Sbjct: 84 KVVVTTDTVRAEIDTAGGIVSRLELLKEH---EKDGKPVVLFERDNVRT-YMARSGLIGG 139 Query: 130 ANNIELPNSNTVWNLISG-KILTPTTPIKLVFKNANNILFERTISLDEHYLFK----IVD 184 +LPN TV+ G + L +++ N + L + Y+F+ +VD Sbjct: 140 ----DLPNHTTVFTAAPGPRTLDGAEQLEVALTAEKN-----GVKLVKTYVFRKGSYVVD 190 Query: 185 T---VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKS 240 T VTN + + + R + + F AV D + + DI K Sbjct: 191 TKFAVTNAGAAPVSPTLYLELARDGSKVEQSQFYSTFTGPAVYTDADKYHKIDFEDIAKG 250 Query: 241 SIS-NFHESNSWLGISDKYWASVFIP--SKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + +N W+ + Y+AS +IP KE SF+ Q D H Y+ + Sbjct: 251 KATVPAAANNGWVAMVQHYFASAWIPQTGKEHSFYVQ---QIDPHL-YRVGVQQPLGELA 306 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PG ++TT LFAG +E H + +A P E++ D+GW +AKP+F L+ + + Sbjct: 307 PGATVTTDARLFAGPQE----EHMLEKIA-PGLELVKDYGWLTILAKPLFWLLEKLHGFL 361 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G +I+ TV +KL+FFPL+ Y S MK++QP++ +RE++K PQ + + M+ Sbjct: 362 GNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIRERYKND-PQKMNQEMMG 420 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYKT +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ GWI DL+ D Sbjct: 421 LYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIHDLSVPD-------- 472 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 PFY I PI+M++SMF+Q K++P P D QA ++ MP+VF FPAG Sbjct: 473 ---PFY--------ILPIVMAVSMFVQTKLNPTPPDPVQAKVMMIMPLVFSVMFFFFPAG 521 Query: 538 LIIYWSWSNVISIVQQAVIMKMHG 561 L++YW +N++SI QQ I +M G Sbjct: 522 LVLYWVVNNILSIAQQWQINRMLG 545 >gi|297539958|ref|YP_003675727.1| membrane protein insertase [Methylotenera sp. 301] gi|297259305|gb|ADI31150.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Methylotenera sp. 301] Length = 542 Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 126/334 (37%), Positives = 199/334 (59%), Gaps = 33/334 (9%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + D+ K + ++ W+G+ Y+ S +IP + + L++ R +K + + Sbjct: 231 FKDMAKEPL-KVTSNDGWVGLLQHYFVSAWIPKDGLAREFYTEKLNEHMYRIGSKSTLS- 288 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDL--AIPRFEMLIDWGWFYFIAKPMFMLMS 351 TI PG S+T LF+G + +KDL P E +D+GW +A P+F ++S Sbjct: 289 -TIAPGASLTVPARLFSGPQT-------KKDLVETAPGLEYTVDYGWLKMVASPLFWVLS 340 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++LV N+G+AI+L T+ +K F+PL+ K Y S A M+ + P+++ +++KF Q + Sbjct: 341 LIHSLVHNWGVAIILLTLLIKAAFYPLSAKSYRSMAQMRELAPRLESMKQKFGDDR-QKM 399 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+AM++LYKT INP++GC PIL+QIPVF ++Y ++ S+E+RHAPF+GWI+DL+A D Sbjct: 400 QQAMMELYKTEKINPMSGCLPILIQIPVFISLYWMLLGSIELRHAPFFGWIQDLSAVD-- 457 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 P+Y I PIIM +SM IQ K++P P D QA ++ WMPV+F Sbjct: 458 ---------PYY--------ILPIIMGISMIIQTKLNPKPTDPIQAKVMTWMPVIFSVFF 500 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK-MHGAEI 564 FPAGL++YW +N+ISI QQ + K +H A + Sbjct: 501 FFFPAGLVLYWVVNNIISIWQQWYVNKSIHAAAL 534 >gi|33151313|ref|NP_872666.1| putative inner membrane protein translocase component YidC [Haemophilus ducreyi 35000HP] gi|38502923|sp|Q7VPM2|OXAA_HAEDU RecName: Full=Inner membrane protein oxaA gi|33147533|gb|AAP95055.1| 60 kDa inner-membrane protein [Haemophilus ducreyi 35000HP] Length = 536 Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 132/399 (33%), Positives = 219/399 (54%), Gaps = 34/399 (8%) Query: 164 NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 + +++ +T +L Y + + NNS + I P G+I +H ++ + Sbjct: 156 DGVMYTKTFTLKRGSYDVAVSFDIQNNSANTIEVQPYGQI-KHSLLDSSGNLAMPTYTGG 214 Query: 223 VLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 +KYS ++ K+++ N W+ + Y+ S ++P+++ S ++ + + Sbjct: 215 AYSSSETNYKKYSFDEMTKANL-NIDTKGGWVALLQHYFVSAWVPNQDAS-NTLYSRTHN 272 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G A + T+ P T T+ L+ G K+ E A E+ +D+GW + Sbjct: 273 GVAT--IGYRGPITTVKPNTKTTITSQLWTGPKD-----QKEMAQAATHLELTVDYGWAW 325 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIAKP+F L+ + ++++GN+G+AIM T+ VK L +PL K QY S A M+ +QPK+ ELR Sbjct: 326 FIAKPLFWLLIFIHSIIGNWGLAIMGVTLVVKSLLYPLTKAQYTSMAKMRMLQPKLQELR 385 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E++ Q+ Q+ M++LYK +NP+ GC P++LQ+P+F A+Y ++E+RHAPF+G Sbjct: 386 ERYGDDRQQMSQE-MMKLYKQEKVNPMGGCLPLILQMPIFIALYWTFMEAVELRHAPFFG 444 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI+DL+A DP IF P++M LSMF+ KMSP AD Q + Sbjct: 445 WIQDLSAQDPYYIF-------------------PVLMGLSMFLLQKMSPTAVADPTQLKV 485 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +MPV+F FP+GL++YW SN I+IVQQ +I + Sbjct: 486 MTFMPVIFTVFFLWFPSGLVLYWLTSNCITIVQQWLIYR 524 >gi|83747144|ref|ZP_00944187.1| 60 kDa inner membrane protein YIDC [Ralstonia solanacearum UW551] gi|207741912|ref|YP_002258304.1| preprotein translocase subunit yidc [Ralstonia solanacearum IPO1609] gi|83726119|gb|EAP73254.1| 60 kDa inner membrane protein YIDC [Ralstonia solanacearum UW551] gi|206593298|emb|CAQ60225.1| preprotein translocase subunit yidc [Ralstonia solanacearum IPO1609] Length = 563 Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 129/329 (39%), Positives = 193/329 (58%), Gaps = 19/329 (5%) Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 +SDI+K N W+G+ Y+AS +IP+ S +F Y+ Sbjct: 244 FSDIDKGKAHVPAATDNGWVGMVQHYFASAWIPA--ASAKREFYVDRVDTNFYRIGIQEP 301 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 T+ PG S++ T LFAG +E + + P +++ D+GW IAKP+F L+ Sbjct: 302 LGTVAPGASLSATARLFAGPQEESML-----EAITPGLDLVKDYGWLTVIAKPLFWLLER 356 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + L+GN+G +I+ TV VKL+FFPL+ Y S A MK++QP++ +RE+ K PQ + Sbjct: 357 IHALLGNWGWSIVALTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGD-PQKMN 415 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+ LY+T +NPL GC PIL+QIPVF ++Y + S+EMR AP+ GW+ DLAA D Sbjct: 416 QEMMTLYRTEKVNPLGGCLPILIQIPVFMSLYWALLSSVEMRGAPWVGWVHDLAAPD--- 472 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 LFG F +P VG+ PI+M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 473 --ALFGTY-FGVP----VGLLPILMAVSMFVQTKLNPTPPDPVQAKMMMFMPLAFSVMFF 525 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FP+GL++YW +N +SI QQ I +M G Sbjct: 526 FFPSGLVLYWVVNNCLSIAQQWSINRMLG 554 >gi|219871547|ref|YP_002475922.1| putative inner membrane protein translocase component YidC [Haemophilus parasuis SH0165] gi|254772790|sp|B8F6M2|OXAA_HAEPS RecName: Full=Inner membrane protein oxaA gi|219691751|gb|ACL32974.1| putative inner membrane protein translocase component YidC [Haemophilus parasuis SH0165] Length = 546 Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 144/488 (29%), Positives = 250/488 (51%), Gaps = 46/488 (9%) Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV------STANNIE 134 +++ G D +L Y+ ++ SN+P L N K Y A+ V +TA + Sbjct: 82 TVDTLGGDVVDSDLLKYNAELDSNTPFELL--QDNGKVLYVAQSGLVGKNGIDTTAGRAQ 139 Query: 135 LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQ 193 + + L G+ + L F+ + +++ +T +L Y + + N + + Sbjct: 140 YQATAEKFALAEGQ---DEIALPLTFEK-DGVVYTKTFTLKRGSYNVAVNYHIKNGTAET 195 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEKSSISNFHESNSW 251 + P G+ ++H +T F + + +KYS ++ K+++S W Sbjct: 196 LEVQPYGQ-LKHTLVESTGNFAMPTYTGGAYSSSEVNYKKYSFDEMAKANLS-VDTKAGW 253 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 + Y+ S +IP+++ + Y G+ + + P T T+ L+ G Sbjct: 254 AAVLQHYFVSAWIPNQDAENN---LYTRTGNGVGTIGYRGPVTQVAPNGEATITSHLWTG 310 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 K+ + + F++ +D+GW +FIAKP+F L+++ ++V N+G+AI+ T+ V Sbjct: 311 PKDQAAMAQVANN-----FDLTVDYGWAWFIAKPLFWLLTFIQSIVSNWGLAIIGVTIVV 365 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 K + +PL K QY S A M+ +QP+I E+RE+F Q + + M++LYK +NP+ GC Sbjct: 366 KTILYPLTKAQYTSMAKMRMLQPRIQEMRERFGDD-RQRMSQEMMKLYKEEKVNPMGGCL 424 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP IF Sbjct: 425 PILLQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIF----------------- 467 Query: 492 IWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 P++M SM++ KMSP P AD Q ++N+MPV+F FP+GL++YW SN+I+I Sbjct: 468 --PLLMGGSMYLLQKMSPTPIADPVQQKVMNFMPVMFTVFFLWFPSGLVLYWLTSNLITI 525 Query: 551 VQQAVIMK 558 QQ +I + Sbjct: 526 AQQWLIYR 533 >gi|207727482|ref|YP_002255876.1| preprotein translocase subunit yidc [Ralstonia solanacearum MolK2] gi|206590719|emb|CAQ56331.1| preprotein translocase subunit yidc [Ralstonia solanacearum MolK2] Length = 563 Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 129/329 (39%), Positives = 193/329 (58%), Gaps = 19/329 (5%) Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 +SDI+K N W+G+ Y+AS +IP+ S +F Y+ Sbjct: 244 FSDIDKGKAHVPAATDNGWVGMVQHYFASAWIPA--ASAKREFYVDRVDTNFYRIGIQEP 301 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 T+ PG S++ T LFAG +E + + P +++ D+GW IAKP+F L+ Sbjct: 302 LGTVAPGASLSATARLFAGPQEESML-----EAITPGLDLVKDYGWLTVIAKPLFWLLER 356 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + L+GN+G +I+ TV VKL+FFPL+ Y S A MK++QP++ +RE+ K PQ + Sbjct: 357 IHALLGNWGWSIVALTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGD-PQKMN 415 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+ LY+T +NPL GC PIL+QIPVF ++Y + S+EMR AP+ GW+ DLAA D Sbjct: 416 QEMMTLYRTEKVNPLGGCLPILIQIPVFMSLYWALLSSVEMRGAPWVGWVHDLAAPD--- 472 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 LFG F +P VG+ PI+M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 473 --ALFGTY-FGVP----VGLLPILMAVSMFVQTKLNPTPPDPVQAKMMMFMPLAFSVMFF 525 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FP+GL++YW +N +SI QQ I +M G Sbjct: 526 FFPSGLVLYWVVNNCLSIAQQWSINRMLG 554 >gi|237749310|ref|ZP_04579790.1| preprotein translocase YidC subunit [Oxalobacter formigenes OXCC13] gi|229380672|gb|EEO30763.1| preprotein translocase YidC subunit [Oxalobacter formigenes OXCC13] Length = 559 Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 156/486 (32%), Positives = 242/486 (49%), Gaps = 40/486 (8%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV 141 IN G F +L L Y +V S +V L S Y A+ PN T Sbjct: 98 INPDGGVFQNLELLKYPDNVDSTKDMV--LFESAPPRIYLAQTGLTGGL----YPNHATR 151 Query: 142 WNLISGK--ILTPTTPIKLVFK-NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFS 197 +++ G+ + + +KLV + + +T + Y+ + VTN S + I S Sbjct: 152 FHIRPGERTLGENSDEVKLVMDAEQDGVRLTKTYTFKRGSYVIDVDQKVTNLSHEPINAS 211 Query: 198 PRGRIMR--HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN-FHESNSWLGI 254 +++R +P+ + G + + K+ +I + + + N W+G+ Sbjct: 212 LYLQLLRDSERPEGQSRFISTFTGPAVYSEEDKFQKIKFDNIGEGKMDHAIKTDNGWVGM 271 Query: 255 SDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE 314 Y+ S FIP + + + K + G Y TI P S + L+ G +E Sbjct: 272 VQHYFVSAFIPQDKVARENYTKKV--GENLYAIGTVIPLGTIAPNASASNDTRLYVGPQE 329 Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374 + P E++ D+GW IAKP+F LM++ +N VGN+G I+L T +KL+ Sbjct: 330 SKLLEK-----TAPGLELVKDYGWLTIIAKPIFWLMTHIHNEVGNWGWTIILLTCLIKLI 384 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 F PL+ Y S A MK P+I ELRE++K Q + K ++ LYK INPL GC P++ Sbjct: 385 FAPLSAASYRSMAKMKQFTPRITELRERYKDD-KQRMNKELMGLYKAEKINPLGGCLPVV 443 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +QIPVF ++Y V+ S+E+R+AP+ GWI++LAA D P+Y I P Sbjct: 444 IQIPVFISLYWVLLASVEIRNAPWLGWIQNLAAPD-----------PYY--------ILP 484 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 IIM+ SMFIQ KMSPPP D QA ++ ++P+ F FP+GL++YW +N++SI QQ Sbjct: 485 IIMAGSMFIQQKMSPPPPDPMQAKMMMFLPIAFSITFFFFPSGLVLYWVVNNLLSIAQQY 544 Query: 555 VIMKMH 560 I K + Sbjct: 545 WITKKY 550 >gi|77920733|ref|YP_358548.1| inner-membrane protein [Pelobacter carbinolicus DSM 2380] gi|77546816|gb|ABA90378.1| protein translocase subunit yidC [Pelobacter carbinolicus DSM 2380] Length = 542 Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 167/576 (28%), Positives = 284/576 (49%), Gaps = 52/576 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT--VKQPNQVDNSYAAVLIDD 60 N N +A+ L V+I + F+V P +N+E ++ P V + Sbjct: 2 ENKNVIIALLLMVLIWTGYTTFFVKPAPAPVNDEPAVAESFPAVTPEVVGERVVPSVDHV 61 Query: 61 RAQALS--MSPRVELKNPSLIGSINLK-GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A A S ++PR + + ++ G + L L+ Y + +S +VTL+ N Sbjct: 62 MAAAASSDIAPRDFVVDTEDFRAVFTNVGGRLKKLELKNYRETLKEDSGLVTLVDADNAL 121 Query: 118 NAY--FAELDYVSTANNI---ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 + + + D N + ++P K L T + +N ++ E+ Sbjct: 122 STFGILGQGDIALAENTVYATDVPAEGLTLGSDDKKDLRFTAVL------SNGVVVEKVF 175 Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGDKSL 229 SL+ + Y F + V N I+ S ++ +P + G + F+ A+ D L Sbjct: 176 SLNGKGYDFNLQVRVVNPGDRPIQGSLE--LLMVQPWSEDRE-GSRYSFVGPAIYADDEL 232 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 K ++E +I + S W DKY+ + +P + S F G+A Sbjct: 233 NTYKVKELEDGAIRH-DNSGIWTAFEDKYFMTAAVPLR--SEQHAFVLEKVGNAVKNIVS 289 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 S N +++ +S+T L+AG ++ + L + ID+G+F +A+P+ + Sbjct: 290 SGN-LSVGGQQSVTLDYLLYAGPRDLDVLEQVNHGL-----DKAIDFGFFDMLARPLLSV 343 Query: 350 MSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 + + + NL+ N+G+AI+L TVF+K+LF+PL K Y S +M+ +QP++ LREK+K+ Sbjct: 344 LKFCHKNLISNYGVAIILLTVFIKVLFWPLTHKSYKSMRDMQKLQPEMQRLREKYKKDKE 403 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + + + +++LY+ + +NP+ GC P+ QIPVFFA+YKV+ S+ +RH PF WI+DLAA Sbjct: 404 R-MNREIMELYRKNRVNPMGGCLPMFAQIPVFFALYKVLLGSIALRHEPFIFWIQDLAAK 462 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 D P+Y I P+IM ++MF Q KMSP D QA I+ +MPV+F Sbjct: 463 D-----------PYY--------ITPLIMGVTMFFQQKMSPTTMDSQQAKIMLFMPVIFT 503 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 F +FP+GL+IYW +NV++I QQ I + G + Sbjct: 504 FMFLNFPSGLVIYWLVNNVLTIAQQWFINREGGQPV 539 >gi|218677921|ref|ZP_03525818.1| putative inner membrane protein translocase component YidC [Rhizobium etli CIAT 894] Length = 240 Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 100/238 (42%), Positives = 145/238 (60%) Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 QAL+ SPRV + +L GSINL GA+ DDL L+GYH V +SPI+TL SP+ TK+ YF Sbjct: 3 QALAKSPRVVIDTAALSGSINLAGARLDDLKLKGYHETVDDSSPIITLFSPAETKDGYFT 62 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 EL Y+ + +P T+W G LT TP+ L + N + F RTIS+DE Y+F + Sbjct: 63 ELGYIGSDATGSVPGPTTLWTAPEGAKLTEKTPVTLSYTNDKGLTFTRTISVDERYMFTV 122 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 D + N+ S GR+MR+ T + + + EGFI V+GD L+E KYS +EK ++ Sbjct: 123 ADKIVNSGQAPAALSSYGRVMRYNKPTTPSVYVLHEGFIGVIGDDGLIESKYSAVEKEAV 182 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 S + WLGI+DKYWA+ +P + ++ ++F Y +DG RYQA + + T+ PG+ Sbjct: 183 SPAKSTGGWLGITDKYWAATIVPPQSAAYEAKFSYFTDGQPRYQADYKDDAFTVAPGQ 240 >gi|113460279|ref|YP_718337.1| putative inner membrane protein translocase component YidC [Haemophilus somnus 129PT] gi|123131891|sp|Q0I0Z1|OXAA_HAES1 RecName: Full=Inner membrane protein oxaA gi|112822322|gb|ABI24411.1| protein translocase subunit yidC [Haemophilus somnus 129PT] Length = 541 Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 166/568 (29%), Positives = 274/568 (48%), Gaps = 54/568 (9%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +R+ + + +S +I WQ Y P+ E E+ + V NS A D Sbjct: 4 KRSLLFMALLFISFLIYQQWQVDYNTPKPE--MTEQAQVSEV-------NSTALTATSDI 54 Query: 62 AQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A RV L+N +N G L Y ++ S++P V L +N Y Sbjct: 55 ANDTQAKGRVITLENDVFRLKVNTLGGDVIGSELLNYDAELHSSAPFVLL--QNNADKVY 112 Query: 121 FAELDYV------STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 A+ V S A V+ L G+ + LVF+ + +++ + L Sbjct: 113 IAQSGLVGKNGIDSRAGRANYQVEGDVFKLAEGQ---QELKVPLVFEK-DGVIYRKVFVL 168 Query: 175 D-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 Y ++ +TN S I P + + H ++ + + +K Sbjct: 169 KPGSYALEVNFEITNQSPKPIEVVPYAQ-LTHTLVESSGSMAMPTYTGGAYSSSETNYKK 227 Query: 234 YS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 YS D+EK+ + + H W+ + Y+ S +IP+++ + ++ + + + + Sbjct: 228 YSFEDMEKADL-DIHTKAGWVALLQHYFVSAWIPNQDAN-NTLYTLTNTKKHLGSIGYRS 285 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I I G + T L+ G P + D+A ++ +D+GW +FIAKP+F L++ Sbjct: 286 APIVIENGATETIHTQLWTG----PKLQDQMADVA-NHLDLTVDYGWAWFIAKPLFKLLT 340 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 +LV N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F + Q + Sbjct: 341 LIQSLVQNWGLAIIGVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERFGED-RQRM 399 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GW++DL+A DP Sbjct: 400 SQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFMEAVELRHAPFFGWVQDLSAQDPY 459 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 I PI+M SMF+ KMSP P AD Q ++ +MP++F+ Sbjct: 460 FIL-------------------PILMGASMFLLQKMSPTPVADPMQQKVMTFMPLIFMVF 500 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW SN+I+I QQ +I + Sbjct: 501 FLFFPAGLVLYWLASNLITIAQQWLIYR 528 >gi|300692995|ref|YP_003753990.1| cytoplasmic insertase, essential for proper integration of ATPase into the membrane [Ralstonia solanacearum PSI07] gi|299080055|emb|CBJ52730.1| cytoplasmic insertase, essential for proper integration of ATPase into the membrane [Ralstonia solanacearum PSI07] Length = 554 Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 128/329 (38%), Positives = 189/329 (57%), Gaps = 28/329 (8%) Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 +SDI+K N W+G+ Y+AS +IP+ S +F Y+ Sbjct: 244 FSDIDKGKAHVPAATDNGWVGMVQHYFASAWIPA--ASAKREFYVDRVDTNFYRIGIQEP 301 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 T+ PG +I+ T LFAG +E + P E++ D+GW IAKP+F L+ Sbjct: 302 LGTVAPGANISATARLFAGPQEERMLEGI-----TPGLELVKDYGWLTIIAKPLFWLLEK 356 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + L+GN+G +I+ TV VKL+FFPL+ Y S A MK++QP++ +RE+ K P Q + Sbjct: 357 IHLLLGNWGWSIVGLTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGDP-QKMN 415 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+QLY+T +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ GW+ DLA+ D Sbjct: 416 QEMMQLYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWVHDLASPD--- 472 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 PFY I PI+M++SMF+Q +++P P D QA ++ +MP+ F Sbjct: 473 --------PFY--------ILPILMAVSMFVQTRLNPTPPDPVQAKMMMFMPIAFSVMFF 516 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++YW +N +SI QQ I +M G Sbjct: 517 FFPAGLVLYWVVNNCLSIAQQWSINRMLG 545 >gi|119475233|ref|ZP_01615586.1| putative inner membrane protein translocase component YidC [marine gamma proteobacterium HTCC2143] gi|119451436|gb|EAW32669.1| putative inner membrane protein translocase component YidC [marine gamma proteobacterium HTCC2143] Length = 569 Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 140/411 (34%), Positives = 216/411 (52%), Gaps = 37/411 (9%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNT 213 + LVF++ + + + YL + V NNS G++ R + P + +T Sbjct: 182 VDLVFQSNDPVSITKRFHFTRGEYLIGVEYIVKNNSEMPWSGGMFGQLKRDNSPDPSADT 241 Query: 214 FGVQEGFIAVLG------DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 G+ G LG D+ + + DIE++S + W+ I Y+ S ++P+ Sbjct: 242 SGM--GLAPYLGAAINLPDEPYKKVSFDDIEENSFPKQNIEGGWVAIIQHYFTSAWVPNA 299 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + + + DG F++ +IT+ G + + L+ G K+ Y + Sbjct: 300 KQTHAYSMRKTKDGANI--VGFTSPQITVAAGATGDVKSELYIGPKD-----QYRLEEIS 352 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P E+ +D+G ++IA+P+F L++ + +GN+G AI+ T+ VK FF L K Y S A Sbjct: 353 PGLELTVDYGILWWIAQPLFWLLTKLHGYLGNWGFAIIAVTILVKAAFFQLNAKAYTSMA 412 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 NM+ +QPK+ LRE++ Q + M+ LYK INPL GC PIL+Q+PVF A+Y V+ Sbjct: 413 NMRKVQPKLTALRERYADDK-QKQSQEMMALYKREKINPLGGCLPILVQMPVFMALYWVL 471 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+E+RHAPF G+IKDL+ DP I P+IM +SMFIQ + Sbjct: 472 MESVELRHAPFIGYIKDLSVMDPYFIL-------------------PLIMGVSMFIQQRF 512 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +PPP D QA I+ WMPV+F F FPAGL++YW +N +SI QQ +I K Sbjct: 513 NPPPPDPMQAKIMQWMPVMFTFFFLFFPAGLVLYWVVNNTLSIAQQYLITK 563 >gi|170718320|ref|YP_001785332.1| inner membrane protein translocase component YidC [Haemophilus somnus 2336] gi|254772997|sp|B0URU3|OXAA_HAES2 RecName: Full=Inner membrane protein oxaA gi|168826449|gb|ACA31820.1| 60 kDa inner membrane insertion protein [Haemophilus somnus 2336] Length = 541 Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 165/568 (29%), Positives = 274/568 (48%), Gaps = 54/568 (9%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +R+ + + +S +I WQ Y P+ E E+ + V NS A D Sbjct: 4 KRSLLFMALLFISFLIYQQWQVDYNTPKPEV--TEQAQVSEV-------NSTALTATSDI 54 Query: 62 AQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A RV L+N +N G L Y ++ S++P V L +N Y Sbjct: 55 ANDTQAKGRVITLENDVFRLKVNTLGGDVIGSELLNYDAELHSSAPFVLL--QNNADKVY 112 Query: 121 FAELDYV------STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 A+ V S A V+ L G+ + L+F+ + +++ + L Sbjct: 113 IAQSGLVGKNGIDSRAGRANYQVEGDVFKLAEGQ---QELKVPLIFEK-DGVIYRKVFVL 168 Query: 175 D-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 Y ++ +TN S I P + + H ++ + + +K Sbjct: 169 KPGSYALEVNFEITNQSPKPIELVPYAQ-LTHTLVESSGSMAMPTYTGGAYSSSETNYKK 227 Query: 234 YS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 YS D+EK+ + + H W+ + Y+ S +IP+++ + ++ + + + + Sbjct: 228 YSFEDMEKADL-DIHTKAGWVALLQHYFVSAWIPNQDAN-NTLYTLTNTKKHLGSIGYRS 285 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I I G + T L+ G P + D+A ++ +D+GW +FIAKP+F L++ Sbjct: 286 APIVIENGATETIHTQLWTG----PKLQDQMADVA-NHLDLTVDYGWAWFIAKPLFKLLT 340 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 +LV N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F + Q + Sbjct: 341 LIQSLVQNWGLAIIGVTLVVKAVLYPLTKAQYTSMAKMRMLQPKLQEMRERFGED-RQRM 399 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GW++DL+A DP Sbjct: 400 SQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFMEAVELRHAPFFGWVQDLSAQDPY 459 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 I PI+M SMF+ KMSP P AD Q ++ +MP++F+ Sbjct: 460 FIL-------------------PILMGASMFLLQKMSPTPVADPMQQKVMTFMPLIFMVF 500 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW SN+I+I QQ +I + Sbjct: 501 FLFFPAGLVLYWLASNLITIAQQWLIYR 528 >gi|194291287|ref|YP_002007194.1| inner membrane protein translocase component yidc [Cupriavidus taiwanensis LMG 19424] gi|254772772|sp|B3R883|OXAA_CUPTR RecName: Full=Inner membrane protein oxaA gi|193225122|emb|CAQ71133.1| preprotein translocase, cooperates with SecYEG and SecDFyajC translocon, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 559 Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 148/440 (33%), Positives = 231/440 (52%), Gaps = 46/440 (10%) Query: 134 ELPNSNTVWNLISG-KILTPTTPIKLVFKNANNILFERTISLDEHYLFK----IVDT--- 185 +LPN TV+ G + L +++V N + L + Y F+ +VD+ Sbjct: 144 DLPNHTTVFTAAPGPRALDGAEQVQVVLTGEKN-----GVKLVKTYTFRKGSYVVDSKFD 198 Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSIS- 243 VTN + + + R + + F A+ D + + DI K + Sbjct: 199 VTNAGTAPVSPTLYLELARDGSKVEQSQFYSTFTGPAIYTDADKYHKLSFEDIAKGKATV 258 Query: 244 NFHESNSWLGISDKYWASVFIP--SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 +N W+ + Y+AS +IP KE SF+ Q + R + E+ PG + Sbjct: 259 PAAANNGWVAMVQHYFASAWIPQTGKEHSFYVQ--QIDPNLYRVGIQQPLGELA--PGAT 314 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 ++T LFAG +E H + +A P E++ D+GW +AKP+F L+ + +GN+G Sbjct: 315 VSTDARLFAGPQE----EHMLEKIA-PGLELVKDYGWLTILAKPLFWLLEKLHGFLGNWG 369 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +I+ TV +KL+FFPL+ Y S MK++QP++ +RE++K PQ + + M+ LY+T Sbjct: 370 WSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIRERYKND-PQKMNQEMMALYRT 428 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ GWI DL+ D P Sbjct: 429 EKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIHDLSVPD-----------P 477 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 FY I PI+M++SMF+Q K++P P D QA ++ MP+VF FPAGL++Y Sbjct: 478 FY--------ILPIVMAVSMFVQTKLNPTPPDPVQAKVMMIMPLVFSVMFFFFPAGLVLY 529 Query: 542 WSWSNVISIVQQAVIMKMHG 561 W +N++SI QQ I +M G Sbjct: 530 WVVNNILSIAQQWQINRMLG 549 >gi|152980131|ref|YP_001355384.1| preprotein translocase YidC subunit [Janthinobacterium sp. Marseille] gi|166975871|sp|A6T4D7|OXAA_JANMA RecName: Full=Inner membrane protein oxaA gi|151280208|gb|ABR88618.1| preprotein translocase YidC subunit [Janthinobacterium sp. Marseille] Length = 564 Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 161/490 (32%), Positives = 245/490 (50%), Gaps = 31/490 (6%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 I+ G + L L +H S IV L S Y + + A PN Sbjct: 95 ADIDTVGGEIRHLELLTHHESSDSTKDIV--LFDSTPPRTYLGQTGLIGGA----YPNHK 148 Query: 140 TVWNLISG-KILTPTTPIKLVFK-NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRF 196 +++ + G + L ++LV + N + +T + Y I V N + I Sbjct: 149 SLFTVRPGPRSLEAGDQVQLVLEAEQNGVKLVKTYTFKRGEYKIDIKHDVINKTAAAINP 208 Query: 197 SPRGRIMRHKPQTATNT-FGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHESNS-WLG 253 S +++R + + F AV D ++ + IEK I + ++ S W+ Sbjct: 209 SLYLQLVRDGSKLNNESMFYSTFTGPAVYSDSDKFQKVTFESIEKGKIEHVVKAESGWIA 268 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 + Y+ S F+P K L+ A + PG + + L++G + Sbjct: 269 MVQHYFVSAFVPPANVPREYFTKKLATNLYAVGAIMPMGAVA--PGATQSMDATLYSGPQ 326 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 E + + P FE++ D+GW IAKP+F LM + L+GN+G I++ T+ +KL Sbjct: 327 ESKRL-----EAVAPGFELVKDYGWLTIIAKPIFWLMIQIHQLLGNWGWTIVVLTIVIKL 381 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 FFPL+ Y S A MK + PK+ E+R K+K PQ + AM++LYK INPL GC PI Sbjct: 382 AFFPLSAASYRSMAKMKLVTPKMTEIRTKYKGE-PQKMNAAMMELYKKEKINPLGGCMPI 440 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH--VG 491 ++QIPVF ++Y V+ S+EMR+AP W WI DLA+ D TLFG Y+ G H +G Sbjct: 441 VIQIPVFISLYWVLLASVEMRNAP-WLWISDLASPD-----TLFG---SYMIGSFHLTIG 491 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 I PI+M++SMFIQ K++P P D QA ++ +MP+ F FPAGL++YW +N++SI Sbjct: 492 ILPILMAISMFIQTKLNPTPPDPIQAKVMMFMPIAFSLMFFFFPAGLVLYWVVNNILSIA 551 Query: 552 QQAVIMKMHG 561 QQ I K G Sbjct: 552 QQWTISKKMG 561 >gi|292493917|ref|YP_003529356.1| hypothetical protein Nhal_3959 [Nitrosococcus halophilus Nc4] gi|291582512|gb|ADE16969.1| 60 kDa inner membrane insertion protein [Nitrosococcus halophilus Nc4] Length = 554 Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 156/529 (29%), Positives = 261/529 (49%), Gaps = 41/529 (7%) Query: 38 KNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + + + P V + + D + +E+K L I + ++ L Y Sbjct: 53 EEVPDAQLPEGVPGTTPPEMADMDTTPIQPGQTIEVKTDLLTVKIEMASGDLYEVQLLDY 112 Query: 98 HLDVSSNSPIVTLLSPSN-----TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 + + + V+LL ++ T++ A T + S + L+ G+ Sbjct: 113 PVSLKKPNEPVSLLHQADPDLFVTQSGLRAVSGPSVTHETAQFSASKAYYELVPGE---D 169 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQI-RFSPRGRIMRHKPQTAT 211 + + L +++ N I +T + N DQ+ P + +R P++ Sbjct: 170 SLVVPLTWEDENGIKVTKTYIFHRDSYEVDLKLKIENGTDQVWTGRPYAQFIRTPPKS-- 227 Query: 212 NTFGVQEGFIAVLGDKSLVEQK--YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 ++F V+ AV + QK + D+ S H S W + Y+ + +IP +E Sbjct: 228 DSFFVRSYIGAVFSTEENEYQKVDFGDLASQSFER-HSSGGWAAMLQHYFVAAWIPREEG 286 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 S + K++ +RY A ++ T+ PG++ LFAG P I A P+ Sbjct: 287 SNYYYGKHVRG--SRYIAGVMPSQQTVAPGENGEFNLSLFAG----PKIQDRLAATA-PK 339 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + +D+G +A+P+F LMS+F++LVGN+G AI+L TV VKL+FF L++ Y S A M Sbjct: 340 LNLTVDYGKLTILAEPLFWLMSWFHSLVGNWGWAIVLLTVVVKLIFFKLSQTSYRSMARM 399 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ L+E+ ++ Q AM++LY+ +NP+ GC PIL+QIPVF A+Y ++ Sbjct: 400 RKLQPQLLALKERHGDDRHKMGQ-AMMELYRKEKVNPMGGCLPILVQIPVFIALYWMLIE 458 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+E+RHAPF WI+DL A DP I P++M +SMF+Q K+SP Sbjct: 459 SVELRHAPFVFWIQDLTAKDPYYIL-------------------PLLMGVSMFVQQKLSP 499 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P D QA +++ MPV+F FPAGL++YW +N++SI QQ I + Sbjct: 500 APTDPIQAKVISLMPVMFTIFFVLFPAGLVLYWVVNNILSIAQQWYITR 548 >gi|237747151|ref|ZP_04577631.1| preprotein translocase YidC subunit [Oxalobacter formigenes HOxBLS] gi|229378502|gb|EEO28593.1| preprotein translocase YidC subunit [Oxalobacter formigenes HOxBLS] Length = 557 Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 155/488 (31%), Positives = 241/488 (49%), Gaps = 41/488 (8%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV 141 IN +G F +L L Y +V ++ L S Y A+ PN T Sbjct: 95 INSEGGVFQNLELLKYPDNVDPEKDMI--LFESVPPRIYLAQTGLTGGV----YPNHATR 148 Query: 142 WNLISGK--ILTPTTPIKLVFK-NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFS 197 + + G+ + +KLV + + +T + Y+ + VTN + + I S Sbjct: 149 FTVHPGERSLADGKDEVKLVMDAERDGVRLTKTYTFKRGSYVVDVDQKVTNLTNEPIDAS 208 Query: 198 PRGRIMRH--KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF--HESNSWLG 253 +++R +P+ + G + K+ DI ++ ++ N W+ Sbjct: 209 LYLQLLRDSSRPEGQSRFISTFTGPAVYTQADKFQKLKFDDITETKGADHATKADNGWIA 268 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 I Y+ S FIP + + K + G Y TI P S + + L+AG + Sbjct: 269 IVQHYFVSAFIPKDKVERENYTKKV--GEDLYAIGTVIPLGTIAPKASASNDSRLYAGPQ 326 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 E + P E++ D+GW IAKP+F LM++ + VGN+G I+L T +KL Sbjct: 327 ESIILEQ-----TAPGLELVKDYGWLTIIAKPIFWLMTHIHKEVGNWGWTIILLTCLIKL 381 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 +F PL+ Y S A MK P+I ELR+++K Q + + ++ LYK INPL GC P+ Sbjct: 382 VFLPLSAASYKSMARMKQFTPRIQELRDRYKDD-KQRMNQELMALYKAEKINPLGGCLPV 440 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 ++QIPVF ++Y V+ S+E+R+AP+ GWI++LAA D PFY I Sbjct: 441 VVQIPVFISLYWVLLASVEIRNAPWLGWIQNLAAPD-----------PFY--------IL 481 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 PIIM+ SMFIQ KMSPPP D QA ++ ++P+VF FP+GL++YW +N++SI QQ Sbjct: 482 PIIMAGSMFIQQKMSPPPPDPLQAKLMMFLPIVFSITFFFFPSGLVLYWVVNNLLSIAQQ 541 Query: 554 AVIMKMHG 561 I K +G Sbjct: 542 YWINKRYG 549 >gi|88705404|ref|ZP_01103115.1| Inner membrane protein oxaA [Congregibacter litoralis KT71] gi|88700494|gb|EAQ97602.1| Inner membrane protein oxaA [Congregibacter litoralis KT71] Length = 580 Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 149/511 (29%), Positives = 255/511 (49%), Gaps = 68/511 (13%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE------ 123 +++ SL +I+LKG ++ L + D+ ++P V L +N++ Y A+ Sbjct: 106 IQVYTDSLQLAIDLKGGDIVEVALPKFLADIDDPDTPFVLL--ENNSRRVYVAQSGLIGK 163 Query: 124 --------LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI-LFERTISL 174 +Y STA+ E+ ++T+ + L + N I + +R L Sbjct: 164 NGIDSKARANYQSTASRYEMGAADTL-------------EVDLTWSNDAGIEVTKRFRFL 210 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE-----GFIAVLGDKSL 229 + Y+ + + N S + + + G+I R + G G + D Sbjct: 211 RDSYVVDVDFIINNQSSEAWQGNLFGQIKRDSSAADSGGGGSMGMQPFLGAATTMPDDRF 270 Query: 230 VEQKYSDIEKSSISNFHESN--SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + D++ F E N W+ + Y+ S +IP+ E + + + G A Sbjct: 271 KKFSFEDMQDDP---FREQNIGGWIAMIQHYFLSAWIPNPEKTHTYSTRVTNSGFNI--A 325 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F++ + + PG + +AG K+ Y P E+ +D+GW +++A+P+F Sbjct: 326 GFTSPAVVVAPGAQQEVSARFYAGPKD-----QYSLQEISPFLELSVDYGWLWWVAQPLF 380 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L++ + +VGN+G+AI+L TV +K +FF L+ Y S ANM+ +QPK+ ++RE++ Sbjct: 381 WLLTKIFAVVGNWGVAIILLTVLIKAVFFKLSATSYKSMANMRRVQPKMADIREQYADD- 439 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q +AM++LYK INP+ GC PIL+Q+PVF A+Y ++ S+E+RHAPF WI DL+ Sbjct: 440 KQKQSQAMMELYKKEKINPMGGCLPILVQMPVFIALYWMLMESVELRHAPFMLWIDDLSV 499 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP + P++M SMF K++PPP D QA I+ W+PV+F Sbjct: 500 MDPYFVL-------------------PLMMGASMFFMQKLNPPPPDPMQAKIMQWLPVIF 540 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FPAGL++YW +N++S+ QQ VI + Sbjct: 541 TFFFLWFPAGLVLYWVVNNLLSMAQQYVITR 571 >gi|56477030|ref|YP_158619.1| preprotein translocase subunit yidC [Aromatoleum aromaticum EbN1] gi|81677486|sp|Q5P4P4|OXAA_AZOSE RecName: Full=Inner membrane protein oxaA gi|56313073|emb|CAI07718.1| preprotein translocase subunit yidC [Aromatoleum aromaticum EbN1] Length = 550 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 154/522 (29%), Positives = 254/522 (48%), Gaps = 64/522 (12%) Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A S +PR+ ++ ++ ++ +G L L + V L T + Y Sbjct: 66 AATASTAPRMVVRTDLMVAEVSAQGGDIVRLELAQHKATADKTKNFV--LFDDGTIHLYA 123 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK----NANNILFERTISLDE- 176 A+ + +LP T + L G+ + +LV + + + + ++ Sbjct: 124 AQSGLIGE----DLPTHKTTFALPQGEQVLKEGEDRLVVRLEAPEQDGVKVTKVMTFHRG 179 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRG--RIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQK 233 +YL + + N+S + SP ++ R KP + FGV F Sbjct: 180 NYLVDVAYEIVNSS--ERTLSPHAYYQLTRDGKPAESVEAFGVTT-FTG--------PAF 228 Query: 234 YSDIEKSSISNFHE------------SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 Y+D EK F E S+ W+ + Y+ S ++P T +F G Sbjct: 229 YTDAEKFQKVQFEEIAEGKAKFVKKASDGWIAMVQHYFVSAWLPQGGT--EREFFAQKVG 286 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + Y A I PG+S L+AG +E +D+A P ++++D+GW Sbjct: 287 NDLYSAGVIVPVAAIQPGQSGRVEASLYAGPQE----QDKLEDIA-PGLDLVVDYGWLTV 341 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA P+F ++S+ + +VGN+G AI++ T+ +KL+FFPL+ Y S A M+ + P++ L+E Sbjct: 342 IAAPLFWVLSWIHGVVGNWGWAIIIVTILIKLMFFPLSAASYKSMAKMRVLGPRMQRLKE 401 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + + +Q+ M+++Y+ INPL GC PIL+QIPVF ++Y V+ S+EMR AP+ GW Sbjct: 402 LYGNDKAK-MQQEMMEMYRKEKINPLGGCLPILVQIPVFISLYWVLLGSVEMRQAPWLGW 460 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I+DL+A DP I P+IM +SM IQMK++P P D QA ++ Sbjct: 461 IQDLSAKDPYFIL-------------------PVIMGVSMLIQMKLNPTPPDPIQAKVMM 501 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 MPV+F F FP+GL++YW +N++SI QQ I +M +E Sbjct: 502 AMPVIFTFMFLWFPSGLVLYWVVNNILSIAQQWQITRMIESE 543 >gi|17544723|ref|NP_518125.1| inner membrane protein translocase component YidC [Ralstonia solanacearum GMI1000] gi|38503108|sp|Q8Y3H6|OXAA_RALSO RecName: Full=Inner membrane protein oxaA gi|17427012|emb|CAD13532.1| putative preprotein translocase subunit yidc transmembrane [Ralstonia solanacearum GMI1000] Length = 553 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 128/331 (38%), Positives = 192/331 (58%), Gaps = 32/331 (9%) Query: 234 YSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 ++DI+KS ++S W+ + Y+AS +IP+ S +F Y+ Sbjct: 243 FADIDKSKAHVPAPTDSGWVAMVQHYFASAWIPA--ASAKREFYVDRIDTNFYRVGMQQA 300 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAKPMFMLM 350 T+ PG S++ T LFAG +E E+ L P E++ D+GW IAKP+F L+ Sbjct: 301 LGTVAPGASVSATARLFAGPQE-------ERMLEGITPGLELVKDYGWLTIIAKPLFWLL 353 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + L+GN+G +I+ TV VKL+FFPL+ Y S A MK++QP++ +RE+ K PQ Sbjct: 354 EKIHKLLGNWGWSIVALTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGD-PQK 412 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+ LY+T +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ GW+ DLA+ D Sbjct: 413 MNQEMMTLYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWVHDLASPD- 471 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 PFY I PI+M++SMF+Q +++P P D QA ++ +MP+ F Sbjct: 472 ----------PFY--------ILPILMAVSMFVQTRLNPTPPDPVQAKMMMFMPIAFSVM 513 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++YW +N +SI QQ I +M G Sbjct: 514 FFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 544 >gi|189426685|ref|YP_001953862.1| hypothetical protein Glov_3642 [Geobacter lovleyi SZ] gi|254772788|sp|B3E3S0|OXAA_GEOLS RecName: Full=Inner membrane protein oxaA gi|189422944|gb|ACD97342.1| 60 kDa inner membrane insertion protein [Geobacter lovleyi SZ] Length = 530 Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 171/576 (29%), Positives = 283/576 (49%), Gaps = 80/576 (13%) Query: 9 VAIALSVIIVYAWQNFYVYPRIEEMNNERKNI-QTVKQPNQVDNSYAAVLIDDRAQALS- 66 +A+ LS+ + Y + FY E+K V P + +N AA + +A A++ Sbjct: 7 LAVVLSIGVFYLFSFFY--------GPEKKPAPAAVSVPVKTENVGAAPAVSVQAAAIAP 58 Query: 67 -MSPR------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + P+ V ++ + GA L L+G+ + V LL+ ++ Sbjct: 59 VVVPKIVSAADVTVETERYTAVFSGVGASLKSLTLKGFRETNKPGAAQVKLLANADPALP 118 Query: 120 YFAE--LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-E 176 F+ + + +A PN +++ L+SG+ + + +A + +T + D Sbjct: 119 SFSTRGVGFALSAQAAYSPNVSSL-KLLSGE----KKQLVFTYVDAQGFVVRKTYTFDGT 173 Query: 177 HYLFKIVDTVTNNSIDQIR----------FSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 Y + + NNS I F P + R++ T+G ++ D Sbjct: 174 GYGIALETQLVNNSAAPIAGAFQYLFTSPFDPPQKDGRYE------TYGS-----SLYAD 222 Query: 227 KSLVEQKYSDIEK---SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 SL ++D K S+ + + +W I+DKY+ S + + + K + G+ Sbjct: 223 GSL----HTDAPKNVASATKKYDKGITWAAINDKYFLSALLSVNNSIASVELKKSAAGY- 277 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 ++ S ++ PG+++T + LF G KE + L E +D GWF IA Sbjct: 278 -LESDISTPAFSVAPGQAVTVAHKLFIGPKEIDILKAQGSSL-----EQSLDLGWFSAIA 331 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KPM + +FY VGN+GIAI++ TV +K+ FFPL K Y S M +QPK+ L+EK+ Sbjct: 332 KPMLYSLKFFYRYVGNYGIAIIIITVILKIFFFPLTHKSYKSMKEMGKLQPKMAALKEKY 391 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K + +A+++LY+ H +NPL GC P+++QIPVFFA+YK + S+E+RHAPF WI Sbjct: 392 KND-KDAMNRAVMELYRDHKVNPLGGCLPMIVQIPVFFALYKALMYSIELRHAPFMFWIT 450 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ D PFY + P+IM ++MFIQ KM+P D+ Q I+ + Sbjct: 451 DLSDKD-----------PFY--------VTPVIMGVTMFIQQKMTPSNMDEMQQKIMLGL 491 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 PV+F F SFP+GL++YW +N+++I QQA I K+ Sbjct: 492 PVIFTFMFLSFPSGLVLYWLINNILTIGQQAYINKL 527 >gi|253702733|ref|YP_003023922.1| hypothetical protein GM21_4149 [Geobacter sp. M21] gi|259515695|sp|C6DYS1|OXAA_GEOSM RecName: Full=Inner membrane protein oxaA gi|251777583|gb|ACT20164.1| 60 kDa inner membrane insertion protein [Geobacter sp. M21] Length = 536 Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 130/359 (36%), Positives = 199/359 (55%), Gaps = 33/359 (9%) Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQK-----YSDIEKSSISNFHESNSWLGISDKYW 259 H QT+ +EG V +L E K D++K+ + + + +W +DKY+ Sbjct: 203 HLLQTSRVVDAKKEGRYEVYSPSTLAEGKVKLDDLEDLQKTPV-QYGKDIAWSAFADKYF 261 Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 I K + SQ + + ++ +++ PG+ ++ G K+ + Sbjct: 262 VDGIIADKGSI--SQVRITRPANDAILRDVASPTVSVAPGQRSAINYAIYYGPKDLDILK 319 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 L RFE +ID+GWF IAKP+ + + Y GN+GIAI++ T +KL+FFPL Sbjct: 320 -----LQGSRFEEVIDYGWFGPIAKPLIYSLKFLYKYTGNYGIAIIIITFILKLVFFPLT 374 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K Y S +M+ +QPK+ EL+EKFK + +A+++LYKTH +NPL GC P+L+QIPV Sbjct: 375 HKSYKSMKDMQKLQPKMTELKEKFKND-RDAMNRAVMELYKTHKVNPLGGCLPMLVQIPV 433 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 FF +Y+ + S+E+RHAPF+ WI DL+A D P+Y + PIIM Sbjct: 434 FFGLYRALMYSIELRHAPFYLWITDLSAKD-----------PYY--------VTPIIMGA 474 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MFIQ KM+P D QA ++ +P+VF F +FP+GL+IYW +NV++I QQ I K Sbjct: 475 TMFIQQKMTPTNMDPVQAKMMLMLPIVFTFMFLNFPSGLVIYWLVNNVLTIAQQMYINK 533 >gi|167856364|ref|ZP_02479091.1| putative inner membrane protein translocase component YidC [Haemophilus parasuis 29755] gi|167852502|gb|EDS23789.1| putative inner membrane protein translocase component YidC [Haemophilus parasuis 29755] Length = 546 Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 143/488 (29%), Positives = 249/488 (51%), Gaps = 46/488 (9%) Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV------STANNIE 134 +++ G D +L Y+ ++ SN+P L N K Y A+ V +TA + Sbjct: 82 TVDTLGGDVVDSDLLKYNAELDSNTPFELL--QDNGKVLYVAQSGLVGKNGIDTTAGRAQ 139 Query: 135 LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQ 193 + + L G+ + L F+ +++++ +T +L Y + + N S + Sbjct: 140 YQATAEKFALAEGQ---NEIDVPLTFEK-DDVVYTKTFTLKRGSYNVAVNYHIKNGSAET 195 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEKSSISNFHESNSW 251 + P G+ ++H + F + + +KYS ++ K+++S W Sbjct: 196 LEVQPYGQ-LKHTLVESAGNFAMPTYTGGAYSSSEVNYKKYSFDEMAKANLS-VDTKAGW 253 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 + Y+ S +IP+++ + Y G+ + + P T + L+ G Sbjct: 254 AAVLQHYFVSAWIPNQDAENN---LYTRTGNGVGTIGYRGPVTQVAPNGEATIISHLWTG 310 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 K+ + + F++ +D+GW +FIAKP+F L+++ ++V N+G+AI+ T+ V Sbjct: 311 PKDQAAMAQVANN-----FDLTVDYGWAWFIAKPLFWLLTFIQSIVSNWGLAIIGVTIVV 365 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 K + +PL K QY S A M+ +QP+I E+RE+F Q + + M++LYK +NP+ GC Sbjct: 366 KTILYPLTKAQYTSMAKMRMLQPRIQEMRERFGDD-RQRMSQEMMKLYKEEKVNPMGGCL 424 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP IF Sbjct: 425 PILLQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIF----------------- 467 Query: 492 IWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 P++M SM++ KMSP P AD Q ++N+MPV+F FP+GL++YW SN+I+I Sbjct: 468 --PLLMGGSMYLLQKMSPTPIADPVQQKVMNFMPVMFTVFFLWFPSGLVLYWLTSNLITI 525 Query: 551 VQQAVIMK 558 QQ +I + Sbjct: 526 AQQWLIYR 533 >gi|261346746|ref|ZP_05974390.1| membrane protein insertase, YidC/Oxa1 family [Providencia rustigianii DSM 4541] gi|282565146|gb|EFB70681.1| membrane protein insertase, YidC/Oxa1 family [Providencia rustigianii DSM 4541] Length = 550 Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 155/576 (26%), Positives = 284/576 (49%), Gaps = 64/576 (11%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + IAL + WQ + +++ E K +QT +Q + NS + + Sbjct: 4 QRN---LLLIALLFVTFLVWQAW----ESDKVAQETKTVQTSQQKTDMPNSDGQAVTNSE 56 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 L + +K L IN +G D+ +L Y ++S P L + Y Sbjct: 57 QGKL-----IAVKTDVLDVRINTRGGDIDEADLLAYPATLNSPDPFRLL--ETTPGFVYQ 109 Query: 122 AELDYVS-------TANNIELP---NSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 A+ + NN + P + + L +G+ + + F + N +++++T Sbjct: 110 AQSGLIGPHGPDNPANNNGQRPLYTADSASFELQAGQ---DELRVPMSFTDNNGVVYQKT 166 Query: 172 ISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQ--EGFIAV 223 L Y ++ ++ N + + + G++ + + T +N F + G Sbjct: 167 YILKRGKYTVEVEYSIQNPTAQPLSLAFFGQLKQTIALPEQRDTGSNNFALHTYRGAAYS 226 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + + + +SDIE ++S W+ + +Y+A+ ++P E + S F + Sbjct: 227 SDENNYKKYSFSDIEDKNLS-LTTKGGWVAMLQQYFATAWVP--EATEQSTFYTIDLDKK 283 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 + + +TI + T ++ L+ G P I ++A P ++ +D+GW +FI+ Sbjct: 284 SAIVGYKSEPVTIAANGAGTYSSTLWIG----PEIQSEMAEVA-PHLDLTVDYGWLWFIS 338 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +P+F L+ + + VGN+GIAI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 339 QPLFKLLKFIHGFVGNWGIAIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERI 398 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q + + M+ +YK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF+GWI+ Sbjct: 399 GDD-KQRMSQEMMAMYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFFGWIQ 457 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNW 522 DL+A D P+Y I P++M ++MF+ KMSP D Q I+ + Sbjct: 458 DLSAQD-----------PYY--------ILPVLMGVTMFVIQKMSPTAVTDPMQQKIMTY 498 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MPVVF FP+GL++Y+ SN+++I+QQ +I + Sbjct: 499 MPVVFTVFFLWFPSGLVLYYIVSNLVTIIQQQIIYR 534 >gi|212712607|ref|ZP_03320735.1| hypothetical protein PROVALCAL_03702 [Providencia alcalifaciens DSM 30120] gi|212684823|gb|EEB44351.1| hypothetical protein PROVALCAL_03702 [Providencia alcalifaciens DSM 30120] Length = 553 Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 157/586 (26%), Positives = 285/586 (48%), Gaps = 81/586 (13%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S ++ AW++ +++ E K +Q +Q + +S + + Sbjct: 4 QRNLLLIALLFVSFLVWQAWES-------DKVAQETKAVQVSQQKTDMPSSAS-----ND 51 Query: 62 AQALSMSPR---VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS------ 112 QA++ S + + +K L IN +G D+ +L Y ++S P L + Sbjct: 52 GQAVTGSEQGKLIAVKTDVLDIRINTRGGDIDEADLLAYPATLNSPDPFRLLETTPGFVY 111 Query: 113 -----------PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 P N N Y S A + EL + I + F Sbjct: 112 QAQSGLIGPHGPDNPANNNGQRPLYTSDATSFELKDGQDELR------------IPMTFT 159 Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFG 215 + N +++++T L Y + + N + + + G++ + + T ++ F Sbjct: 160 DNNGVVYQKTYILKRGKYTVDVEYNIQNPTAQPLTLAFFGQLKQTIALPEQRDTGSSNFA 219 Query: 216 VQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + G + + + +SDIE ++S W+ + +Y+A+ +IP+ +S S Sbjct: 220 LHTYRGAAYSSDENNYKKYSFSDIEDKNLS-LTTKGGWVAMLQQYFATAWIPA--SSEQS 276 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 F + + + +TI + T ++ L+ G P I ++A P ++ Sbjct: 277 TFYTIDLDKKSAIVGYKSEPLTIASNGAATYSSTLWVG----PEIQSEMAEVA-PHLDLT 331 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+GW +FI++P+F L+ + + VGN+GIAI++ T V+ + +PL K QY S A M+ +Q Sbjct: 332 VDYGWLWFISQPLFKLLKFIHGFVGNWGIAIIVITFIVRGIMYPLTKAQYTSMAKMRLLQ 391 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ +RE+ Q + + M+ LYK+ +NPL GC P+L+Q+P+F A+Y ++ S+E+ Sbjct: 392 PKLAAMRERIGDD-KQRMSQEMMALYKSEKVNPLGGCLPLLIQMPIFLALYYMLMGSVEL 450 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512 RHAPF+GWI+DL+A D P+Y I P++M ++MF+ KMSP Sbjct: 451 RHAPFFGWIQDLSAQD-----------PYY--------ILPVLMGVTMFVIQKMSPTTVT 491 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q I+ +MPVVF FP+GL++Y+ SN+++I+QQ VI + Sbjct: 492 DPMQQKIMMYMPVVFTVFFLWFPSGLVLYYIVSNLVTIIQQQVIYR 537 >gi|317154269|ref|YP_004122317.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio aespoeensis Aspo-2] gi|316944520|gb|ADU63571.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio aespoeensis Aspo-2] Length = 554 Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 168/581 (28%), Positives = 286/581 (49%), Gaps = 78/581 (13%) Query: 9 VAIALSVIIVYAWQNFYVYPRIEE--------MNNERKNIQTVKQPNQVDNSYA-AVLID 59 +A+ALS I+++ WQ + + P EE + ER+ + Q + + A V Sbjct: 11 IALALSFIVIFGWQ-YLMAPSAEEQAEVARKAVEAERRAVALSSQSDAAGVTQAHGVPAG 69 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 D ++ V + P N +G + L+ Y + +SP V L+ NA Sbjct: 70 DFIATAGVA--VTVDTPLYTAVFNSQGGILEKFILKNYRETIKPDSPNVDLIG----ANA 123 Query: 120 YF-AELDYVSTANNIELPN-SNTVWNLISGKI-LTPTTPIK-LVFKN-ANNILFERTISL 174 + L + TA + E W + L +K L F + + ERT++ Sbjct: 124 FAKGPLGLILTAGDKEFHTWQRGEWAFAGSNLALGEGDGVKTLTFSGQSGDFRIERTLTF 183 Query: 175 DEHYLF----KIVDTVTNNSID-QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 D +V T+ N ++ + F+ + M + + T + +++ G + + Sbjct: 184 DPATYHITESAMVTTLGNTGVEGAVSFTAAAKSMSAEDDSYNPT---KVAYLSADGREEM 240 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 ++ D++++ I++ W + Y+ IP+ E++ LS G + Sbjct: 241 SDR--DDLKETGITS-PSGLKWGAVESNYFLFAIIPASESA------TLSAGVQDDIFRM 291 Query: 290 SANE-ITILPGKSITTTNFLFAGAKEFPTIHHYEKDL--AIP-RFEMLIDWGWFYFIAKP 345 + NE T LP + T F G PT ++D+ +P + E +D+GWF F+AKP Sbjct: 292 AVNEDATFLPNVTKTVKASYFLG----PT----DRDMLATMPNQLEKAVDFGWFDFLAKP 343 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + + +++FY+ V N+GIAI+L T+ +KL+F+PL+++ Y S MK +QP + +LREK+ Sbjct: 344 LLIGLNFFYDYVHNYGIAIILLTIVIKLIFWPLSQRSYASMEQMKKLQPMVQKLREKYGD 403 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG----- 460 ++ Q+ M LYKT+ +NP+ GC P+++QIPVFF +YK + ++E+RHAPF Sbjct: 404 DKQRLNQETM-ALYKTYKVNPMGGCLPMVVQIPVFFGLYKALLGAVELRHAPFIANVPFT 462 Query: 461 ---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 W+ DL+A D P+Y + P+IM +MF+Q KM+P D Q Sbjct: 463 DLPWLADLSAKD-----------PYY--------VTPLIMGATMFLQQKMTPSAGDPTQQ 503 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ MPVVF F FP+GL+IYW +NV+SI QQ +I++ Sbjct: 504 KIMMLMPVVFTFMFLQFPSGLVIYWLLNNVLSIGQQLLIVR 544 >gi|39998555|ref|NP_954506.1| hypothetical protein GSU3466 [Geobacter sulfurreducens PCA] gi|81700814|sp|Q746Q2|OXAA_GEOSL RecName: Full=Inner membrane protein oxaA gi|39985502|gb|AAR36856.1| membrane protein, putative [Geobacter sulfurreducens PCA] gi|298507497|gb|ADI86220.1| preprotein translocase subunit YidC [Geobacter sulfurreducens KN400] Length = 531 Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 166/560 (29%), Positives = 275/560 (49%), Gaps = 55/560 (9%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP-NQVDNSYAAVLIDDRAQALS 66 +A+ LS++ Y + + P E Q+ QP QV + V + + Q Sbjct: 6 LIAVVLSILFFYGYTALFSPPPKETPKPVATATQS--QPAQQVTAAPVPVAVPAQPQPAV 63 Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA--EL 124 + V + P+ + + +G L+L+ YH VTL+S N N Sbjct: 64 AARDVSVDTPAYSVTFSTQGGSIKRLDLKRYHETAGPGGKNVTLVSEDNPSNYTIGLRAP 123 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK--NANNILFERTISLD-EHYLFK 181 + N + +P+++ + + P +L F + + +T + + Y + Sbjct: 124 GFGLDQNAVFVPSADAL-------TVGPGEKKQLSFTWVSPAGVTVTKTYNFSGDGYGLE 176 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHK-----PQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 I VTN+ ++ SP + + ++ TFG A L E K D Sbjct: 177 IQYQVTNSGSARVS-SPVQTVQTYPLVPKVKESRFETFGP-----ATFAQDKLFEDKVKD 230 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 +E S + H + W G +DKY+ S + + + + + + G+ + S+ E+++ Sbjct: 231 LE--SGAKTHAAPLWSGFADKYFLSAVLAHEGSMAAATIRKTASGY--LENTISSPELSL 286 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG+ T LF G K+ + L E I+ GWF +AKP+ + +F+N Sbjct: 287 NPGEGRALTYRLFFGPKDIDVLKAQGNSL-----ERAINLGWFAMLAKPLLHSLKFFHNY 341 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 GN+GIAI++ TV +K++F+PL Y S M+ +QPK+ +LREK+K + + +AM+ Sbjct: 342 TGNYGIAIIIITVIIKVIFYPLTHSSYKSMKEMQKLQPKMQQLREKYKNDR-EAMNRAMM 400 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY+TH +NP+ GC P+L+QIPVFFA+YK + S+E+RHAPF WI DLAA D Sbjct: 401 ELYQTHKVNPVGGCLPMLVQIPVFFALYKALMFSIELRHAPFMLWITDLAAKD------- 453 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 P+Y + PIIM ++M IQ KM+P D Q ++ +PVVF F +FP+ Sbjct: 454 ----PYY--------VTPIIMGVTMVIQQKMTPSQMDPVQQKMMMALPVVFTFMFLNFPS 501 Query: 537 GLIIYWSWSNVISIVQQAVI 556 GL++YW +NV++I+QQ I Sbjct: 502 GLVLYWLVNNVLTIIQQYYI 521 >gi|322421977|ref|YP_004201200.1| membrane protein insertase, YidC/Oxa1 family [Geobacter sp. M18] gi|320128364|gb|ADW15924.1| membrane protein insertase, YidC/Oxa1 family [Geobacter sp. M18] Length = 537 Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 146/443 (32%), Positives = 229/443 (51%), Gaps = 60/443 (13%) Query: 126 YVSTANNIELPNSNTVWNLISGKI-LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 Y +AN ++L N + G + T TTP +VFK + + Y + + Sbjct: 141 YNVSANELKLSNGS------KGTLEFTTTTPQGVVFKKIYSFS-------GDAYRIGLTE 187 Query: 185 TVTNNSIDQIRFS----PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE-----QKYS 235 V N+ Q+ + R++ K G V G +L E +K + Sbjct: 188 QVQNSGAAQVAGALHLLQNSRVIDQK---------AGGGRYEVYGPSTLTEDAVKSEKLN 238 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 ++ K+ + + +S +W +DKY+ I K + +Q G + +T Sbjct: 239 NLLKAPV-QYDKSIAWSSFADKYFTESVIAEKGSI--AQLHMTRPGTDAMLRDIVSPAVT 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG++ + + L+ G K+ + L E +ID+GWF IAKP+ + + + Y Sbjct: 296 VAPGQTASVSYALYYGPKDLDILKAQGSSL-----EKVIDYGWFAPIAKPLVVFLKFLYK 350 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 GN+GIAI++ T +KL+FFPL K Y S +M+ +QPK+ L+EK+K + KA+ Sbjct: 351 YTGNYGIAIIIITCILKLVFFPLTHKSYKSMKDMQKLQPKMTALKEKYKNDR-DAMNKAV 409 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYKTH +NPL GC P+L+QIPVFF +Y+ + S+E+RHAPF+ WI DL+A D Sbjct: 410 MELYKTHKVNPLGGCLPMLVQIPVFFGLYRALMYSIELRHAPFYLWITDLSAKD------ 463 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 P+Y + PIIM +MFIQ KM+P D QA ++ +PVVF F +FP Sbjct: 464 -----PYY--------VTPIIMGATMFIQQKMTPSNMDPVQAKMMLMLPVVFTFMFLNFP 510 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 +GL+IYW +NV++I QQ I K Sbjct: 511 SGLVIYWLVNNVLTIAQQMYINK 533 >gi|268593484|ref|ZP_06127705.1| membrane protein insertase, YidC/Oxa1 family [Providencia rettgeri DSM 1131] gi|291310905|gb|EFE51358.1| membrane protein insertase, YidC/Oxa1 family [Providencia rettgeri DSM 1131] Length = 549 Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 162/579 (27%), Positives = 286/579 (49%), Gaps = 71/579 (12%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + IAL + WQ + E + ++++TV+ Q D + Sbjct: 4 QRN---LLLIALLFVSFLVWQAW-------ESDKVAQDVKTVQTSQQAD------MPSSD 47 Query: 62 AQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 AQA++ S + +L K L IN +G D+ +L Y + S SP L +N Sbjct: 48 AQAVTGSGQGKLITVKTDVLDIRINTRGGDIDEADLLAYPATLHSESPFRLL--ETNPGF 105 Query: 119 AYFAELDYVS-------TANNIELP---NSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 Y A+ + NN E P +T + L G+ + + F + N +++ Sbjct: 106 VYQAQSGLIGLHGPDNPANNNGERPLYSADSTTFTLEKGQ---DVLRVPMTFTDNNGVVY 162 Query: 169 ERT-ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFIA 222 ++T I Y ++ ++ N + + + G++ + + T ++ F + A Sbjct: 163 QKTYIVKRGQYTVEVEYSIQNPTAQPLSLAFFGQLKQTIELPKERDTGSSNFALHTYRGA 222 Query: 223 VLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 +KYS DIE ++ + W+ + +Y+A+ +IP+ ++ S F + Sbjct: 223 AYSSDENNYKKYSFGDIEDKNL-DLTTKGGWVAMLQQYFATAWIPA--SAEKSTFYTIDL 279 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 + + +TI + T ++ L+ G P I E P ++ +D+GW + Sbjct: 280 DKKSAIIGYKSEPMTIAANGAGTYSSTLWVG----PEIQS-EMAAVAPHLDLTVDYGWLW 334 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI++P+F L+ + + VGN+GIAI++ T V+ + +PL K QY S A M+ +QPK+ +R Sbjct: 335 FISQPLFKLLKFIHGFVGNWGIAIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMR 394 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + + M+ +YK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF+G Sbjct: 395 ERIGDD-KQRMSQEMMAMYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFFG 453 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI+DL+A D P+Y I P++M ++MF+ KMSP D Q I Sbjct: 454 WIQDLSAQD-----------PYY--------ILPVLMGVTMFVIQKMSPTAVTDPMQQKI 494 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +MPVVF FP+GL++Y+ SN+++I+QQ VI + Sbjct: 495 MTYMPVVFTIFFLWFPSGLVLYYIVSNLVTIIQQQVIYR 533 >gi|114332119|ref|YP_748341.1| 60 kDa inner membrane insertion protein [Nitrosomonas eutropha C91] gi|122313199|sp|Q0AE56|OXAA_NITEC RecName: Full=Inner membrane protein oxaA gi|114309133|gb|ABI60376.1| protein translocase subunit yidC [Nitrosomonas eutropha C91] Length = 622 Score = 223 bits (567), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 162/523 (30%), Positives = 255/523 (48%), Gaps = 66/523 (12%) Query: 64 ALSMSPR-------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 A S++PR + + +I I+ G L L N P L S ++ Sbjct: 81 ADSVTPRLLPSGEQIRVVTDKVIAEIDTMGGDLRRLELLQQPSPEDENVPYSLLHSEAS- 139 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISG---------------KILTPTTPIKLVFK 161 Y A+ V LPN TV+ + SG ++L P T V K Sbjct: 140 -RTYVAQSGLVGEG----LPNHKTVYQVESGIRNYELTAGEDKVVIRLLAPETQGVQVIK 194 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 F R + Y+ I + N S IR +++R +T ++ Sbjct: 195 TYT---FHR-----DSYVIDIGFEIANKSDATIRPFAYFQMLRDDTPPPAHTMMIRSFLG 246 Query: 222 AVLGDKSLVEQK--YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 A + QK + D++K + +N W+ + + Y+ + ++P ++T K Sbjct: 247 AAVYTDEEKYQKIPFDDLDKGKTDYPANANNGWIAMLEHYFLTAWLPPQQTPREYFAKRQ 306 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 SD Y A I G+++TTT L+AG +E +LA P E+ +D+GW Sbjct: 307 SDN--LYTAGVIVPAGVITAGETVTTTMPLYAGPEE----QDRLAELA-PGLELTVDYGW 359 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IAKP+F L+S++++ GN+GIAI+L T+ VKLLFFPL+ Y S A ++ + PK+ Sbjct: 360 LTMIAKPLFRLLSFYHSWTGNWGIAIILLTITVKLLFFPLSAAGYRSMAKLRLVTPKLKR 419 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +++++K Q + +AM+ YKT INP+ GC+PIL+QIPVF A+Y I ++E+R+APF Sbjct: 420 IQDQYKGD-RQRMHQAMMDFYKTEKINPMGGCFPILVQIPVFIALYWTILAAVELRYAPF 478 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DL++ DP + P+++ +SMFIQ +++P P D QA Sbjct: 479 ALWITDLSSPDPKYLL-------------------PVLLGISMFIQTRLNPTPTDPIQAK 519 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 I+ MPV F FPAGL++Y +N++SI QQ I KM+G Sbjct: 520 IMQIMPVAFSAIFFFFPAGLVLYSLVNNILSIAQQWKITKMYG 562 >gi|271502719|ref|YP_003335745.1| membrane protein insertase, YidC/Oxa1 family domain containing [Dickeya dadantii Ech586] gi|270346274|gb|ACZ79039.1| membrane protein insertase, YidC/Oxa1 family domain containing [Dickeya dadantii Ech586] Length = 543 Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 154/569 (27%), Positives = 262/569 (46%), Gaps = 71/569 (12%) Query: 15 VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELK 74 ++I + F ++ + E N QT +Q N A + A + +K Sbjct: 8 LVIALLFVTFMIWQQWETDKNPPATTQTTQQANGAVGDAA----NQGVPASGQGKLITVK 63 Query: 75 NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS-----------------PSNTK 117 L +IN +G ++ +L Y ++ SN P L S P N Sbjct: 64 TDVLSLNINTRGGDIEEADLLAYPAELGSNQPFKLLESTPAFTYQAQSGLTGKNGPDNPA 123 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE- 176 N A Y ++A+ EL I L + +AN + F +T L Sbjct: 124 NG--ARPLYTASADRFELAAGQNELR------------IPLTYTDANGVSFTKTFVLKRG 169 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQTATNTFGVQEGFIAVLGDKSLV 230 Y + +V N S + + G++ + H+ T +N F + A Sbjct: 170 EYALNVEYSVNNTSAQPLELTLFGQLKQSIDLPSHR-DTGSNNFALHTYRGAAFSSSDDK 228 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 +KYS + N + W+ + +Y+A+ ++P+ S + F + G+ F Sbjct: 229 YRKYSFSDMKENLNINTQGGWVAMLQQYFATAWVPNAAAS--NTFYSANLGNGLAAIGFK 286 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + + + PG L+ G P I +A P ++ +D+GW +FI++P+F L+ Sbjct: 287 SPSVVVQPGSQQNLNATLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQPLFKLL 341 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 342 KFLHGFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-KQR 400 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+ LYKT +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 401 MSQEMMALYKTEKVNPLGGCFPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD- 459 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 P+Y + PI+M L+MF KMSP D Q I+ +MPV+F Sbjct: 460 ----------PYY--------VLPILMGLTMFFIQKMSPTTVTDPMQQKIMTYMPVIFTV 501 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I QQ +I + Sbjct: 502 FFLWFPSGLVLYYIVSNLVTIAQQQLIYR 530 >gi|301169726|emb|CBW29327.1| cytoplasmic insertase into membrane protein, Sec system [Haemophilus influenzae 10810] Length = 541 Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 127/376 (33%), Positives = 212/376 (56%), Gaps = 31/376 (8%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 + N S I P G++ +++ N G + + + +SD++ +++S Sbjct: 182 IDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETNYKKYSFSDMQDNNLS- 240 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSANEITILPGKSIT 303 W+ + Y+ S +IP+++ ++Q ++D + + + +TI G T Sbjct: 241 IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGSVVTIPAGSQET 298 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ +V N+G+A Sbjct: 299 ITSSLWTG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTFIQGIVSNWGLA 353 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK Sbjct: 354 IICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-RQRMSQEMMKLYKEEK 412 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D P+Y Sbjct: 413 VNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD-----------PYY 461 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FPAGL++YW Sbjct: 462 --------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPAGLVLYW 513 Query: 543 SWSNVISIVQQAVIMK 558 SN+I+I QQ +I + Sbjct: 514 LVSNLITIAQQQLIYR 529 >gi|251791812|ref|YP_003006533.1| putative inner membrane protein translocase component YidC [Dickeya zeae Ech1591] gi|247540433|gb|ACT09054.1| 60 kDa inner membrane insertion protein [Dickeya zeae Ech1591] Length = 543 Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 149/546 (27%), Positives = 255/546 (46%), Gaps = 67/546 (12%) Query: 38 KNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 KN Q Q+ NS + A + +K L +IN +G ++ +L Y Sbjct: 27 KNPPAATQTTQLANSAVGDAANQGVPASGQGKLITVKTDVLSLNINTRGGDIEEADLLAY 86 Query: 98 HLDVSSNSPIVTLLS-----------------PSNTKNAYFAELDYVSTANNIELPNSNT 140 ++SS+ P L + P N N + Y ++A+ ELP Sbjct: 87 PAELSSSQPFKLLETTPAFTYQAQSGLTGKNGPDNPANG--SRPLYTASADRFELPAGQN 144 Query: 141 VWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPR 199 I L + +AN + F +T L Y + +V N S + + Sbjct: 145 ELR------------IPLTYTDANGVSFTKTFVLKRGEYALNVEYSVNNASAQPLELALF 192 Query: 200 GRIMR------HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 G++ + H+ T +N F + A +KYS + N + W+ Sbjct: 193 GQLKQSIDLPSHR-DTGSNNFALHTYRGAAFSSSEDKYRKYSFSDMKENLNINTQGGWVA 251 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 + +Y+A+ ++P+ + ++ F + G+ F A + + PG L+ G Sbjct: 252 MLQQYFATAWVPT--AAANNTFYSANLGNGLAAIGFKAAPVIVQPGSQQNLNATLWVG-- 307 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 P I +A P ++ +D+GW +FI++P+F L+ + + +GN+G +I+ T V+ Sbjct: 308 --PEIQDKMAAVA-PHLDLTVDYGWLWFISQPLFKLLKFLHGFIGNWGFSIIAITFIVRG 364 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 + +PL K QY S A M+ +QPK+ +RE+ Q + + M+ LYK +NPL GC+P+ Sbjct: 365 IMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-KQRMSQEMMALYKAEKVNPLGGCFPL 423 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 ++Q+P+F A+Y ++ S+E+RHAPF WI DL+A D P+Y + Sbjct: 424 IIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD-----------PYY--------VL 464 Query: 494 PIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 PI+M L+MF KMSP D Q I+ +MPV+F FP+GL++Y+ SN+++I Q Sbjct: 465 PILMGLTMFFIQKMSPTTVTDPMQQKIMTYMPVIFTVFFLWFPSGLVLYYIVSNLVTIAQ 524 Query: 553 QAVIMK 558 Q +I + Sbjct: 525 QQMIYR 530 >gi|238921764|ref|YP_002935279.1| inner membrane protein translocase component YidC [Edwardsiella ictaluri 93-146] gi|259515692|sp|C5BF61|OXAA_EDWI9 RecName: Full=Inner membrane protein oxaA gi|238871333|gb|ACR71044.1| inner membrane protein OxaA [Edwardsiella ictaluri 93-146] Length = 541 Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 157/543 (28%), Positives = 267/543 (49%), Gaps = 63/543 (11%) Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPR---VELKNPSLIGSINLKGAQFDDLNLRGY 97 QT P V + + D +QA+ S + + +K L +IN +G + +L Y Sbjct: 24 QTDHNPQPVAQTAGQSISDTASQAVPESGQGKLITVKTDVLALTINTRGGDIEQADLLAY 83 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS--------NTVWNLISGKI 149 + S++P L + + Y A+ + N T + ++ G+ Sbjct: 84 PATLGSDTPFQLL--ETTPQFVYQAQSGLTGKSGPDNPANGARPLYSANQTSYEMLPGQ- 140 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM----- 203 I L + AN +++ +T L + Y + V N+S D + + G++ Sbjct: 141 --DELRIPLTYTAANGVIYTKTFVLKRNDYAIAVDYKVKNDSHDALDLTLFGQLKQSVDL 198 Query: 204 -RHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWA 260 +H+ T +N F + A QKYS DIE ++ N W+ + +Y+A Sbjct: 199 PKHR-DTGSNNFALHTFRGAAYSSSDDKYQKYSFSDIEDKNL-NVQTKGGWVAMLQQYFA 256 Query: 261 SVFIP--SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 + +IP S +F+S L +G A + A +++ P + L+ G + Sbjct: 257 TAWIPHDSGVNTFYS--ANLGNGQAA--IGYKAPSVSVAPNTEKVLSTTLWVGPE----- 307 Query: 319 HHYEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + D+A P ++ +D+GW +FI++P+F L+ ++ VGN+G AI++ T V+ + + Sbjct: 308 --LQSDMAAVAPHLDLTVDYGWLWFISQPLFKLLQLIHSFVGNWGFAIIIITFIVRGIMY 365 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 PL K QY S A M+ +QPK+ +RE+ Q + + M+ LYKT +NPL GC+P+L+Q Sbjct: 366 PLTKAQYTSMAKMRMLQPKLQAMRERIGDD-KQRMSQEMMALYKTEKVNPLGGCFPLLIQ 424 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 +P+F A+Y ++ S+E+R APF WI DLAA D PFY I PI+ Sbjct: 425 MPIFLALYYMLMGSVELRQAPFALWIHDLAAPD-----------PFY--------ILPIL 465 Query: 497 MSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 M ++MF KMSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ + Sbjct: 466 MGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQL 525 Query: 556 IMK 558 I + Sbjct: 526 IYR 528 >gi|302880138|ref|YP_003848702.1| membrane protein insertase, YidC/Oxa1 family domain containing [Gallionella capsiferriformans ES-2] gi|302582927|gb|ADL56938.1| membrane protein insertase, YidC/Oxa1 family domain containing [Gallionella capsiferriformans ES-2] Length = 541 Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 162/555 (29%), Positives = 270/555 (48%), Gaps = 46/555 (8%) Query: 8 FVAIALSVIIVY-AWQNFYVYPRIEEMNNERKNIQ-TVKQPNQVDNSYAAVLIDDRAQAL 65 F+ + S+++V+ WQ + P +++ + ++ +P + A + + + Sbjct: 9 FLIFSFSLMMVWDGWQRYQNPPVVQQAATTKSDLPVATTKPTDLAAQAAIIQQAAKVETG 68 Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD 125 + +++K L IN G L+ HLD + L + + Y A+ Sbjct: 69 KI---IKVKTDFLEAEINSVGGDIQRLDFIK-HLDGQDKTKQFVLFEKGSGTHNYIAQSG 124 Query: 126 YVSTANNIELPNSNTVWNL--ISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKI 182 + T +PN TV++ S ++ +KL AN + + ++ + Y+ + Sbjct: 125 LLGTG----MPNHTTVFSAEQDSYQLTGDKLEVKLAAVAANGMKVVKLLTFHKSSYVVDV 180 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEK 239 + N + I S +++R P + G +AV DK ++ +SD+EK Sbjct: 181 AYEIENTTAAPITTSAYFQLIRDSIDPAGGSKMVPTYTG-MAVYTDKEKFQKIAFSDVEK 239 Query: 240 SSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 I E N W+GI Y+ + ++P +TS F +G A Y A I P Sbjct: 240 GKIDYPKEGDNGWIGILQHYFVAAWLPKDKTS-REFFTRKLEGDA-YSAGVIVPVAAIAP 297 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G+ + L+AG + D P + +D+GW +A P+F +++ +V Sbjct: 298 GQKAVVSMPLYAGPAQ------STLDSIAPGLGLTVDYGWLTVVATPIFWTLTFIQGMVQ 351 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+L TV +KLLFFPL+ Y S A M+ + PK+++++ + + L +AM+ L Sbjct: 352 NWGVAIILLTVLIKLLFFPLSAASYRSMAKMRVVAPKLEKIKLQHADDREK-LNRAMMDL 410 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YKT INPL GC P+L+QIPVF A+Y I S+EMR+APF+GWI DL+AAD Sbjct: 411 YKTEKINPLGGCLPVLIQIPVFIALYWSILASVEMRNAPFFGWITDLSAAD--------- 461 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 PF+ + P++M SMF+Q K++P P D QA I+ MP+ F FPAGL Sbjct: 462 --PFF--------VLPVLMGASMFLQSKLNPVPPDPIQAKIMKIMPIAFSVVFFWFPAGL 511 Query: 539 IIYWSWSNVISIVQQ 553 ++Y +N +SI QQ Sbjct: 512 VLYSIVNNALSIAQQ 526 >gi|254468017|ref|ZP_05081423.1| inner membrane protein, 60 kDa [beta proteobacterium KB13] gi|207086827|gb|EDZ64110.1| inner membrane protein, 60 kDa [beta proteobacterium KB13] Length = 535 Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 160/554 (28%), Positives = 273/554 (49%), Gaps = 53/554 (9%) Query: 8 FVAIALSVIIVY-AWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 FV + S+++++ +WQ + + N E ++Q P D+S I++ A L+ Sbjct: 9 FVVFSFSLLLLWDSWQQKQLQTELAVNNAELSDLQ----PGDYDSSN----IENPAYQLA 60 Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 ++ +K IN G L L + D + + +L+ Y A+ Sbjct: 61 DDQKIVVKTSLYEAEINTVGGDIRKLKLANFQND--NKDGLYEILNDEMNPLLYIAQSGL 118 Query: 127 VSTANNIELPNSNTVW--NLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 + LP V+ + + + + ++F+N + + I +++Y K+V Sbjct: 119 IGK----NLPTHKDVFKSDQLQYESNDQEVSVPIIFENEEVKVVKTYIFSNDNYQIKLVT 174 Query: 185 TVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 ++TN S ++ +++ HK + G + + DI+ Sbjct: 175 SITNKSDAALQPQIYYQLLHDHKSAEKSGMMPTFTGVSYFTEASKFKKMDFDDIDNQKPF 234 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG--HARYQAKFSANEITILPGKS 301 + ++ W+GI +Y+AS +I + K L+DG A +AK + E G S Sbjct: 235 TQNANDGWIGIIQRYFASAWIIPGNSPRQFYTKRLTDGISSAGVRAKLAMVE----AGSS 290 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDL--AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 ++ L++G + +K L A P E +D+GW FIA P+F L+S LV N Sbjct: 291 AEVSSVLYSGPQ-------LKKQLIKAAPGMEYTVDYGWLTFIASPLFSLLSGIQKLVHN 343 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G++I+L T+ +K+ F+PL+ Y S A +K + P++ ++EKF Q +Q+AM++LY Sbjct: 344 WGVSIILLTLVIKIFFYPLSASSYRSMAQLKEVAPRLQSMKEKFGDDK-QKMQQAMMELY 402 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 KT INPL GC PIL+QIPVF A+Y V+ ++E+R APF+GWI DL+ DP I Sbjct: 403 KTEKINPLGGCLPILIQIPVFIALYWVLLGAVELRQAPFFGWITDLSVKDPLYIL----- 457 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 PI+M+ SMF+Q K++P P D QA ++ MP++F FPAGL+ Sbjct: 458 --------------PILMAASMFLQQKLNPKPTDPTQARLMMMMPIIFSIFFFFFPAGLV 503 Query: 540 IYWSWSNVISIVQQ 553 +YW +NV+S++QQ Sbjct: 504 LYWFINNVLSMMQQ 517 >gi|192360367|ref|YP_001984274.1| inner membrane protein, 60 kDa [Cellvibrio japonicus Ueda107] gi|254772765|sp|B3PIU1|OXAA_CELJU RecName: Full=Inner membrane protein oxaA gi|190686532|gb|ACE84210.1| inner membrane protein, 60 kDa [Cellvibrio japonicus Ueda107] Length = 552 Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 114/325 (35%), Positives = 181/325 (55%), Gaps = 27/325 (8%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + DI K + + W+ + Y+ S +IP + + + + L D Y F+ Sbjct: 246 FEDIAKQTFETSRQGG-WVAMVQHYFISAWIPDASSQVNYKLRKLGD-QDLYLLGFTTQP 303 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + + PG +AG K+ + P ++ +D+GW ++IAKP+F + + Sbjct: 304 VVVEPGSKGVIKASFYAGPKDTERLEEIS-----PYLDLTVDYGWLWWIAKPLFAFLKFI 358 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + +GN+G+AI+ T+ VKLLFFPL+ Y S A M+ +QPK+ EL+E++ + Q + Sbjct: 359 HGFLGNWGLAIIGLTLSVKLLFFPLSAASYRSMAKMRKLQPKLLELKERYGED-RQKFSQ 417 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYKT +NP GC P+L+Q+PVF A+Y V+ S+E+RHAPF+GWI+DL+ DP + Sbjct: 418 EMMKLYKTEQVNPFGGCLPLLIQMPVFIALYWVLMESVELRHAPFFGWIEDLSRMDPYFV 477 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 PII +M+I K++P P D QA I+N +P VF F Sbjct: 478 L-------------------PIIYGATMWIMQKLNPQPTDPMQARIMNMLPFVFTFMFLW 518 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N++SI QQ VI + Sbjct: 519 FPAGLVLYWVTNNLLSIAQQYVITR 543 >gi|16272937|ref|NP_439163.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae Rd KW20] gi|260580091|ref|ZP_05847921.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus influenzae RdAW] gi|1168226|sp|P44973|OXAA_HAEIN RecName: Full=Inner membrane protein oxaA gi|1574032|gb|AAC22663.1| inner membrane protein, 60 kDa (yidC) [Haemophilus influenzae Rd KW20] gi|260093375|gb|EEW77308.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus influenzae RdAW] Length = 541 Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 126/376 (33%), Positives = 212/376 (56%), Gaps = 31/376 (8%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 + N S I P G++ +++ N G + + + +SD++ +++S Sbjct: 182 IDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETNYKKYSFSDMQDNNLS- 240 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSANEITILPGKSIT 303 W+ + Y+ S +IP+++ ++Q ++D + + + +TI G T Sbjct: 241 IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGSVVTIPAGSQET 298 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ +V N+G+A Sbjct: 299 ITSSLWTG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTFIQGIVSNWGLA 353 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK Sbjct: 354 IICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-RQRMSQEMMKLYKEEK 412 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D P+Y Sbjct: 413 VNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD-----------PYY 461 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+GL++YW Sbjct: 462 --------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPSGLVLYW 513 Query: 543 SWSNVISIVQQAVIMK 558 SN+I+I QQ +I + Sbjct: 514 LVSNLITIAQQQLIYR 529 >gi|240949810|ref|ZP_04754139.1| putative inner membrane protein translocase component YidC [Actinobacillus minor NM305] gi|240295727|gb|EER46422.1| putative inner membrane protein translocase component YidC [Actinobacillus minor NM305] Length = 554 Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 154/519 (29%), Positives = 260/519 (50%), Gaps = 57/519 (10%) Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A++ S + +++ L +++ G D +L +H ++ SN+P L N+K Y Sbjct: 59 AESNSKGKTITIESDVLRLTVDTLGGDVIDSDLLKHHAELHSNTPFELL--QDNSKVLYV 116 Query: 122 AELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIK--LVFKNANNILFERTISLDEH 177 A+ + N I+ N + + K+ I L F+ + +++ +T +L Sbjct: 117 AQSGLIG-KNGIDTNNGRAQYQTTADSFKLAEGQNEISVPLTFEK-DGVVYTKTFTLKRG 174 Query: 178 YLFKIVD-TVTNNSIDQIRFSPRGRIMRHK----------PQTATNTFGVQEGFIAVLGD 226 VD + NNS + + P G+ ++H P + E Sbjct: 175 SYNVGVDFNIKNNSAEVVEVQPYGQ-LKHTLVESSGSLTMPTYTGGAYSSSETNYKKYSF 233 Query: 227 KSLVEQKYSDIEKSSISNFH---ESNS-WLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + ++K E+ I+N ESN+ W+ I Y+ S ++P ++ + +G Sbjct: 234 QEMADEKKRKAEQG-IANGGLSIESNTGWVAILQHYFVSAWVPQQDKPMTIYTRVSDNGV 292 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFY 340 A + ++ P T + L+ G K+ +K++A ++ D+GW + Sbjct: 293 ATI--GYRGALTSVAPNSDATISTHLWTGPKD-------QKEMAETAAHLDLTADYGWAW 343 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIAKP+F L++ LV N+G+AI+ T+ VK L +PL K QY S A M+ +QP+I E+R Sbjct: 344 FIAKPLFWLLTQIQKLVVNWGLAIICVTIVVKTLLYPLTKAQYTSMAKMRMLQPRIQEMR 403 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+G Sbjct: 404 ERFGDD-RQRMSQEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFG 462 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI+DL+A D P+Y I P++M SMF+ KMSP P AD Q + Sbjct: 463 WIQDLSAQD-----------PYY--------ILPLLMGGSMFLLQKMSPTPIADPVQQKV 503 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +MPV+F FP+GL++YW SN I+IVQQ +I + Sbjct: 504 MTFMPVMFTVFFLWFPSGLVLYWLTSNCITIVQQWLIYR 542 >gi|33575018|emb|CAE39684.1| probable inner-membrane protein [Bordetella parapertussis] Length = 554 Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 151/482 (31%), Positives = 242/482 (50%), Gaps = 42/482 (8%) Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145 GAQ L Y S+ P T+L + Y A+ V P T ++L+ Sbjct: 94 GAQLIRAELLKYPSSSQSDKP--TVLMDRSADLVYVAQTGVVGAPQGESFPTHQTPFHLV 151 Query: 146 SGKILTPTTPIKLVFK-NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM 203 S + + +VF+ + + +T +L Y + + N SP + Sbjct: 152 SSERSLTGDTLDVVFEAESGGLKVTKTYTLHRGRYDVDVRHAMANTG--GAPLSPALYLQ 209 Query: 204 RHKPQT---ATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHES-NSWLGISDKY 258 + T T++F +AV ++ ++ +SDIEK + ++ N W+GI Y Sbjct: 210 LERDGTDPAGTSSFYHTFTGVAVYSEQDKFQKVTFSDIEKKKGTYIKQADNGWIGIVQHY 269 Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 +A+ +IP++ ++ L Y A+ TI PG S L+ G ++ Sbjct: 270 FATAWIPAQGKQRTNEL--LQVQQNLYAARTIEAVGTIAPGSSANVDAHLWVGPQD---- 323 Query: 319 HHYEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 +K +A P E+++D+GW IAKP+F LM++ + L+GN+G I+ TV +K +FF Sbjct: 324 ---QKAMAAVAPGLELVVDYGWLTIIAKPLFTLMTWLHGLLGNWGWTIVALTVIIKAVFF 380 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 PLA Y S A MK + P++ L+EK+ Q L +AM+++Y+T INPL GC P+++Q Sbjct: 381 PLAAASYRSMARMKQVAPRLQALKEKYGDD-RQKLNQAMMEMYRTEKINPLGGCLPMVVQ 439 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 IPVF A+Y V+ S+EMR AP+ W+ DL+ D PF+ I P I Sbjct: 440 IPVFIALYWVLLASVEMRGAPWILWVHDLSVRD-----------PFF--------ILPAI 480 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M +MF+Q+K++P P D QA ++ MP+VF + FPAGL++YW +N +SI QQ I Sbjct: 481 MMATMFLQIKLNPTPPDPVQAKVMMIMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWTI 540 Query: 557 MK 558 + Sbjct: 541 TR 542 >gi|33568943|emb|CAE35357.1| probable inner-membrane protein [Bordetella bronchiseptica RB50] Length = 554 Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 150/480 (31%), Positives = 243/480 (50%), Gaps = 38/480 (7%) Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145 GAQ L Y S+ P T+L + Y A+ V P T ++L+ Sbjct: 94 GAQLIRAELLKYPSSSQSDKP--TVLMDRSADLVYVAQTGVVGAPQGESFPTHQTPFHLV 151 Query: 146 SGKILTPTTPIKLVFK-NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM 203 S + + +VF+ + + +T +L Y + + N + + ++ Sbjct: 152 SSERSLTGDTLDVVFEAESGGLKVTKTYTLHRGRYDVDVRHAMANTGGAPLNPALYLQLE 211 Query: 204 RHKPQTA-TNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHES-NSWLGISDKYWA 260 R A T++F +AV ++ ++ +SDIEK + ++ N W+GI Y+A Sbjct: 212 RDGTDPAGTSSFYHTFTGVAVYSEQDKFQKVTFSDIEKKKGTYIKQADNGWIGIVQHYFA 271 Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 + +IP++ ++ L Y A+ TI PG S L+ G ++ Sbjct: 272 TAWIPAQGKQRTNEL--LQVQQNLYAARTIEAVGTIAPGSSANVDAHLWVGPQD------ 323 Query: 321 YEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 +K +A P E+++D+GW IAKP+F LM++ + L+GN+G I+ TV +K +FFPL Sbjct: 324 -QKAMAAVAPGLELVVDYGWLTIIAKPLFTLMTWLHGLLGNWGWTIVALTVIIKAVFFPL 382 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 A Y S A MK + P++ L+EK+ Q L +AM+++Y+T INPL GC P+++QIP Sbjct: 383 AAASYRSMARMKQVAPRLQALKEKYGDD-RQKLNQAMMEMYRTEKINPLGGCLPMVVQIP 441 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 VF A+Y V+ S+EMR AP+ W+ DL+ D PF+ I P IM Sbjct: 442 VFIALYWVLLASVEMRGAPWILWVHDLSVRD-----------PFF--------ILPAIMM 482 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MF+Q+K++P P D QA ++ MP+VF + FPAGL++YW +N +SI QQ I + Sbjct: 483 ATMFLQIKLNPTPPDPVQAKVMMIMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWTITR 542 >gi|161610372|ref|NP_886531.2| putative inner membrane protein translocase component YidC [Bordetella parapertussis 12822] gi|38502926|sp|Q7W2K1|OXAA_BORPA RecName: Full=Inner membrane protein oxaA Length = 563 Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 151/482 (31%), Positives = 242/482 (50%), Gaps = 42/482 (8%) Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145 GAQ L Y S+ P T+L + Y A+ V P T ++L+ Sbjct: 103 GAQLIRAELLKYPSSSQSDKP--TVLMDRSADLVYVAQTGVVGAPQGESFPTHQTPFHLV 160 Query: 146 SGKILTPTTPIKLVFK-NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM 203 S + + +VF+ + + +T +L Y + + N SP + Sbjct: 161 SSERSLTGDTLDVVFEAESGGLKVTKTYTLHRGRYDVDVRHAMANTG--GAPLSPALYLQ 218 Query: 204 RHKPQT---ATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHES-NSWLGISDKY 258 + T T++F +AV ++ ++ +SDIEK + ++ N W+GI Y Sbjct: 219 LERDGTDPAGTSSFYHTFTGVAVYSEQDKFQKVTFSDIEKKKGTYIKQADNGWIGIVQHY 278 Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 +A+ +IP++ ++ L Y A+ TI PG S L+ G ++ Sbjct: 279 FATAWIPAQGKQRTNEL--LQVQQNLYAARTIEAVGTIAPGSSANVDAHLWVGPQD---- 332 Query: 319 HHYEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 +K +A P E+++D+GW IAKP+F LM++ + L+GN+G I+ TV +K +FF Sbjct: 333 ---QKAMAAVAPGLELVVDYGWLTIIAKPLFTLMTWLHGLLGNWGWTIVALTVIIKAVFF 389 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 PLA Y S A MK + P++ L+EK+ Q L +AM+++Y+T INPL GC P+++Q Sbjct: 390 PLAAASYRSMARMKQVAPRLQALKEKYGDD-RQKLNQAMMEMYRTEKINPLGGCLPMVVQ 448 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 IPVF A+Y V+ S+EMR AP+ W+ DL+ D PF+ I P I Sbjct: 449 IPVFIALYWVLLASVEMRGAPWILWVHDLSVRD-----------PFF--------ILPAI 489 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M +MF+Q+K++P P D QA ++ MP+VF + FPAGL++YW +N +SI QQ I Sbjct: 490 MMATMFLQIKLNPTPPDPVQAKVMMIMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWTI 549 Query: 557 MK 558 + Sbjct: 550 TR 551 >gi|33591704|ref|NP_879348.1| putative inner membrane protein translocase component YidC [Bordetella pertussis Tohama I] gi|161609254|ref|NP_891527.2| putative inner membrane protein translocase component YidC [Bordetella bronchiseptica RB50] gi|54038802|sp|P65623|OXAA_BORBR RecName: Full=Inner membrane protein oxaA gi|54041691|sp|P65622|OXAA_BORPE RecName: Full=Inner membrane protein oxaA gi|33571347|emb|CAE44824.1| probable inner-membrane protein [Bordetella pertussis Tohama I] gi|332381123|gb|AEE65970.1| putative inner membrane protein translocase component YidC [Bordetella pertussis CS] Length = 563 Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 150/480 (31%), Positives = 243/480 (50%), Gaps = 38/480 (7%) Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145 GAQ L Y S+ P T+L + Y A+ V P T ++L+ Sbjct: 103 GAQLIRAELLKYPSSSQSDKP--TVLMDRSADLVYVAQTGVVGAPQGESFPTHQTPFHLV 160 Query: 146 SGKILTPTTPIKLVFK-NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM 203 S + + +VF+ + + +T +L Y + + N + + ++ Sbjct: 161 SSERSLTGDTLDVVFEAESGGLKVTKTYTLHRGRYDVDVRHAMANTGGAPLNPALYLQLE 220 Query: 204 RHKPQTA-TNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHES-NSWLGISDKYWA 260 R A T++F +AV ++ ++ +SDIEK + ++ N W+GI Y+A Sbjct: 221 RDGTDPAGTSSFYHTFTGVAVYSEQDKFQKVTFSDIEKKKGTYIKQADNGWIGIVQHYFA 280 Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 + +IP++ ++ L Y A+ TI PG S L+ G ++ Sbjct: 281 TAWIPAQGKQRTNEL--LQVQQNLYAARTIEAVGTIAPGSSANVDAHLWVGPQD------ 332 Query: 321 YEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 +K +A P E+++D+GW IAKP+F LM++ + L+GN+G I+ TV +K +FFPL Sbjct: 333 -QKAMAAVAPGLELVVDYGWLTIIAKPLFTLMTWLHGLLGNWGWTIVALTVIIKAVFFPL 391 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 A Y S A MK + P++ L+EK+ Q L +AM+++Y+T INPL GC P+++QIP Sbjct: 392 AAASYRSMARMKQVAPRLQALKEKYGDD-RQKLNQAMMEMYRTEKINPLGGCLPMVVQIP 450 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 VF A+Y V+ S+EMR AP+ W+ DL+ D PF+ I P IM Sbjct: 451 VFIALYWVLLASVEMRGAPWILWVHDLSVRD-----------PFF--------ILPAIMM 491 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MF+Q+K++P P D QA ++ MP+VF + FPAGL++YW +N +SI QQ I + Sbjct: 492 ATMFLQIKLNPTPPDPVQAKVMMIMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWTITR 551 >gi|269103816|ref|ZP_06156513.1| OxaI/YidC membrane insertion protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268163714|gb|EEZ42210.1| OxaI/YidC membrane insertion protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 540 Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 163/563 (28%), Positives = 285/563 (50%), Gaps = 60/563 (10%) Query: 15 VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-------YAAVLIDDRAQALSM 67 ++I + +F ++ + N + Q V Q QV+NS L+ D++ + ++ Sbjct: 8 LLIALLFVSFLLFQQWNSDKNPQPQSQGVAQ--QVNNSGDVPSHSADGQLVTDQSSSQNL 65 Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 + +K L +++ G D L Y+ + S P V L +N +++Y A+ + Sbjct: 66 ---ITIKTDVLALTVDTLGGDVVDAKLLKYNNTLGSKDPFVLL--ENNPEHSYVAQSGLI 120 Query: 128 STANNIELPNSNTVWNLISGK--ILTPTTP---IKLVFKNANNILFERTISLDEH-YLFK 181 N I+ N+ +SGK L P + + ++ + I + +T L + Y Sbjct: 121 G-QNGIDT-NAGRAQFTVSGKDFTLAPDQKELRVPMTYEK-DGIKYTKTFVLKPNSYAVN 177 Query: 182 IVDTVTNNSID----QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 + T+ N S Q+ R ++ K T+ Q G + + D + + + D+ Sbjct: 178 VDYTIDNQSAAPTSVQMYAQLRHSLVASKSSLTMPTY--QGGAYSSV-DTNYKKYSFDDM 234 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIP-SKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + ++ N + W+ + Y+ S +IP S ++ + SDG+ + A +T+ Sbjct: 235 KDKNL-NVTTPDGWVAVLQHYFVSAWIPRDGNESLNNLYSRSSDGNGYIGVRMPA--VTV 291 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG + T L+ G K + K+L + +D+GW +FIA P+ L+S+ +++ Sbjct: 292 APGATDTLKATLWVGPKLQNEMAATAKNL-----NLTVDYGWLWFIASPLHKLLSFIHSI 346 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+G+AIM+ T V+ +PL K QY S A M+ +QPK+ +RE+F Q L + M+ Sbjct: 347 VGNWGVAIMVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERFGDD-RQRLSQEMM 405 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY+ +NPL GC PIL+Q+P+F A+Y + S+E+RHAPF+GWI DL+A D Sbjct: 406 ELYRKEKVNPLGGCLPILVQMPIFIALYWALMESVELRHAPFFGWIHDLSAQD------- 458 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 P+Y I PI+M ++MF+ KMSP D Q I+ +MPV+F F FP Sbjct: 459 ----PYY--------ILPILMGITMFMIQKMSPSTITDPMQQKIMTFMPVMFTFFFLWFP 506 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 +GL++YW SN+++++QQ +I + Sbjct: 507 SGLVLYWLVSNIVTLIQQTLIYR 529 >gi|269140892|ref|YP_003297593.1| 60 kDa inner membrane insertion protein [Edwardsiella tarda EIB202] gi|267986553|gb|ACY86382.1| 60 kDa inner membrane insertion protein [Edwardsiella tarda EIB202] gi|304560650|gb|ADM43314.1| OxaI/YidC membrane insertion protein [Edwardsiella tarda FL6-60] Length = 541 Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 154/541 (28%), Positives = 265/541 (48%), Gaps = 59/541 (10%) Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGY 97 QT P V + + D +QA+ S + +L K L +IN +G + +L Y Sbjct: 24 QTDNNPQPVAQTAGQSVSDTASQAVPESGQGKLITVKTDVLALTINTRGGDIEQADLLAY 83 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS--------NTVWNLISGKI 149 + SN+P L + + Y A+ + N T + ++ G+ Sbjct: 84 PATLGSNTPFQLL--ETTPQFVYQAQSGLTGKSGPDNPANGARPLYSANQTSYEMLPGQ- 140 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM----- 203 I L + AN +++ +T L + Y + V N+S D + + G++ Sbjct: 141 --DELRIPLTYTAANGVIYTKTFVLKRNDYAIAVDYKVKNDSHDALDLTLFGQLKQSVDL 198 Query: 204 -RHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWA 260 +H+ T +N F + A QKYS DIE ++ N W+ + +Y+A Sbjct: 199 PKHR-DTGSNNFALHTFRGAAYSSSDDKYQKYSFSDIEDKNL-NVQTKGGWVAMLQQYFA 256 Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 + +IP S + F + G+ + + A +++ P + L+ G + Sbjct: 257 TAWIP--HDSGVNTFYTANLGNGQAAIGYKAPSVSVAPNTEKVLSTTLWVGPE------- 307 Query: 321 YEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 + D+A P ++ +D+GW +FI++P+F L+ ++ VGN+G AI++ T V+ + +PL Sbjct: 308 LQSDMAAVAPHLDLTVDYGWLWFISQPLFKLLQLIHSFVGNWGFAIIIITFIVRGIMYPL 367 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 K QY S A M+ +QPK+ +RE+ Q + + M+ LYK+ +NPL GC+P+L+Q+P Sbjct: 368 TKAQYTSMAKMRMLQPKLQAMRERIGDD-KQRMSQEMMALYKSEKVNPLGGCFPLLIQMP 426 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 +F A+Y ++ S+E+R APF WI DLAA D P+Y I PI+M Sbjct: 427 IFLALYYMLMGSVELRQAPFALWIHDLAAPD-----------PYY--------ILPILMG 467 Query: 499 LSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++MF KMSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I Sbjct: 468 VTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIY 527 Query: 558 K 558 + Sbjct: 528 R 528 >gi|309973500|gb|ADO96701.1| Inner membrane translocation protein YidC [Haemophilus influenzae R2846] Length = 541 Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 126/376 (33%), Positives = 211/376 (56%), Gaps = 31/376 (8%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 + N S I P G++ +++ N G D + + ++D++ +++S Sbjct: 182 IDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSDTNYKKYSFADMQDNNLS- 240 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSANEITILPGKSIT 303 W+ + Y+ S +IP+++ ++Q ++D + + +TI G T Sbjct: 241 IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGPVVTIPSGSQET 298 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ +V N+G+A Sbjct: 299 ITSSLWTG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTFIQGIVSNWGLA 353 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK Sbjct: 354 IICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-RQRMSQEMMKLYKEEK 412 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D P+Y Sbjct: 413 VNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD-----------PYY 461 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+GL++YW Sbjct: 462 --------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPSGLVLYW 513 Query: 543 SWSNVISIVQQAVIMK 558 SN+I+I QQ +I + Sbjct: 514 LVSNLITIAQQQLIYR 529 >gi|253997709|ref|YP_003049773.1| 60 kDa inner membrane insertion protein [Methylotenera mobilis JLW8] gi|253984388|gb|ACT49246.1| 60 kDa inner membrane insertion protein [Methylotenera mobilis JLW8] Length = 554 Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 132/343 (38%), Positives = 191/343 (55%), Gaps = 54/343 (15%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR--YQAKFSA 291 + D+ K + N ++ W+GI Y+ S +IP DG AR Y K S+ Sbjct: 237 FKDMAKEPL-NITTNDGWVGILQHYFVSAWIPK-------------DGLARKFYTEKLSS 282 Query: 292 NEI---------TILPGKSITTTNFLFAGAKEFPTIHHYEKDL--AIPRFEMLIDWGWFY 340 N TI PG ++T L++G + + DL A P E +D+GW Sbjct: 283 NIFRIGTKSTLSTIQPGATLTVPARLYSGPQT-------KNDLIAAAPGLEYSVDYGWLT 335 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 IA P+F L+S ++LV N+G+AI+L T+ +K FF L+ Y S A M+ + P++ ++ Sbjct: 336 VIASPLFWLLSKIHSLVQNWGVAIILLTILIKAAFFKLSASGYRSMAQMRELAPRLQSMK 395 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EKF Q +Q AM+ LYK INP+ GC+PIL+Q+PVF A+Y V+ S+E+RHAPF+G Sbjct: 396 EKFGDDR-QKMQMAMMDLYKKEKINPMGGCFPILIQVPVFIALYWVLLGSIELRHAPFFG 454 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI+DL+A D PFY + PI+M +M +Q K++P P D QA ++ Sbjct: 455 WIQDLSAID-----------PFY--------VLPILMGATMIVQTKLNPKPTDPMQAKVM 495 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 WMPVVF FPAGL++YW +NV+SI QQ + KM AE Sbjct: 496 TWMPVVFSVFFFFFPAGLVLYWLVNNVLSIAQQWYVNKMIHAE 538 >gi|229846058|ref|ZP_04466170.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 7P49H1] gi|229811062|gb|EEP46779.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 7P49H1] Length = 541 Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 126/376 (33%), Positives = 211/376 (56%), Gaps = 31/376 (8%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 + N S I P G++ +++ N G D + + ++D++ +++S Sbjct: 182 IDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSDTNYKKYSFADMQDNNLS- 240 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSANEITILPGKSIT 303 W+ + Y+ S +IP+++ ++Q ++D + + +TI G T Sbjct: 241 IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGPVVTIPAGSQET 298 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ +V N+G+A Sbjct: 299 ITSSLWTG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTFIQGIVSNWGLA 353 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK Sbjct: 354 IICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-RQRMSQEMMKLYKEEK 412 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D P+Y Sbjct: 413 VNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD-----------PYY 461 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+GL++YW Sbjct: 462 --------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPSGLVLYW 513 Query: 543 SWSNVISIVQQAVIMK 558 SN+I+I QQ +I + Sbjct: 514 LVSNLITIAQQQLIYR 529 >gi|329123023|ref|ZP_08251594.1| YidC/Oxa1 family membrane protein insertase [Haemophilus aegyptius ATCC 11116] gi|327471954|gb|EGF17394.1| YidC/Oxa1 family membrane protein insertase [Haemophilus aegyptius ATCC 11116] Length = 541 Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 120/327 (36%), Positives = 195/327 (59%), Gaps = 30/327 (9%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSAN 292 +SD++ +++S W+ + Y+ S +IP+++ ++Q ++D + + Sbjct: 231 FSDMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGP 287 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 +TI G T T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ Sbjct: 288 VVTIPAGSQETITSSLWIG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTF 342 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + Sbjct: 343 IQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-RQRMS 401 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D Sbjct: 402 QEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD--- 458 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 P+Y I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F Sbjct: 459 --------PYY--------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFF 502 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW SN+I+I QQ +I + Sbjct: 503 LWFPAGLVLYWLVSNLITIAQQQLIYR 529 >gi|319897488|ref|YP_004135685.1| inner membrane protein oxaa [Haemophilus influenzae F3031] gi|317432994|emb|CBY81365.1| Inner membrane protein oxaA [Haemophilus influenzae F3031] Length = 541 Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 126/376 (33%), Positives = 211/376 (56%), Gaps = 31/376 (8%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 + N S I P G++ +++ N G + + + +SD++ +++S Sbjct: 182 IDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETNYKKYSFSDMQDNNLS- 240 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSANEITILPGKSIT 303 W+ + Y+ S +IP+++ ++Q ++D + + +TI G T Sbjct: 241 IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGPVVTIPAGSQET 298 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ +V N+G+A Sbjct: 299 ITSSLWTG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTFIQGIVSNWGLA 353 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK Sbjct: 354 IICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-RQRMSQEMMKLYKEEK 412 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D P+Y Sbjct: 413 VNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD-----------PYY 461 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+GL++YW Sbjct: 462 --------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPSGLVLYW 513 Query: 543 SWSNVISIVQQAVIMK 558 SN+I+I QQ +I + Sbjct: 514 LVSNLITIAQQQLIYR 529 >gi|145637306|ref|ZP_01792967.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittHH] gi|145269558|gb|EDK09500.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittHH] Length = 541 Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 126/376 (33%), Positives = 210/376 (55%), Gaps = 31/376 (8%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 + N S I P G++ + + N G D + + ++D++ +++S Sbjct: 182 IDNQSGQAIEVEPYGQLKHSIVENSGNVAMPTYTGGAYSSSDTNYKKYSFADMQDNNLS- 240 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSANEITILPGKSIT 303 W+ + Y+ S +IP+++ ++Q ++D + + +TI G T Sbjct: 241 IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGPVVTIPSGSQET 298 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ +V N+G+A Sbjct: 299 ITSSLWTG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTFIQGIVSNWGLA 353 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK Sbjct: 354 IICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-RQRMSQEMMKLYKEEK 412 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D P+Y Sbjct: 413 VNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD-----------PYY 461 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+GL++YW Sbjct: 462 --------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPSGLVLYW 513 Query: 543 SWSNVISIVQQAVIMK 558 SN+I+I QQ +I + Sbjct: 514 LVSNLITIAQQQLIYR 529 >gi|126208888|ref|YP_001054113.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae L20] gi|126097680|gb|ABN74508.1| inner membrane protein OxaA [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 493 Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 128/399 (32%), Positives = 218/399 (54%), Gaps = 34/399 (8%) Query: 164 NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 + +L+ +T L Y + V N + + P G+I +H ++ + + Sbjct: 113 DGVLYTKTFVLKRGSYDVAVNFNVKNQTAATVEVQPYGQI-KHTLLESSGSLTMPTYTGG 171 Query: 223 VLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 +KYS D+EK+++ + + W+ + Y+ S ++P+++ ++ + ++ Sbjct: 172 AYSSAETNYKKYSFQDMEKANL-DINTKAGWVALLQHYFVSAWVPNQDAE-NTIYSRTNN 229 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G A + TI P T T+ L+ G K+ E + ++ +D+GW + Sbjct: 230 GIATI--GYRGPVTTIAPNSEATITSQLWTGPKD-----QKEMEATAANLDLTVDYGWAW 282 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIAKP+F L+++ ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+R Sbjct: 283 FIAKPLFALLTFIQSIVTNWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMR 342 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+G Sbjct: 343 ERFGDD-RQRMSQEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFG 401 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI+DL+A D P+Y I P++M SMF+ KMSP P D Q + Sbjct: 402 WIQDLSAQD-----------PYY--------ILPLLMGASMFLLQKMSPSPVTDPVQQKV 442 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +MPV+F FP+GL++YW SN+I+IVQQ +I + Sbjct: 443 MTFMPVMFTVFFLWFPSGLVLYWLTSNIITIVQQWLIYR 481 >gi|15603030|ref|NP_246102.1| putative inner membrane protein translocase component YidC [Pasteurella multocida subsp. multocida str. Pm70] gi|38503177|sp|Q9CLQ2|OXAA_PASMU RecName: Full=Inner membrane protein oxaA gi|12721513|gb|AAK03249.1| YidC [Pasteurella multocida subsp. multocida str. Pm70] Length = 541 Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 152/502 (30%), Positives = 252/502 (50%), Gaps = 52/502 (10%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV--- 127 + L+N ++ G L Y +++SN+P L + +N + Y A+ V Sbjct: 66 ITLENDVFRLEVDTLGGDVVHSELLKYDAELNSNTPFTLLTNKAN--HVYIAQSGLVGKD 123 Query: 128 ---STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIV 183 + A + L G+ + VF+ + + F + L Y + Sbjct: 124 GIDTKAGRANYQVDGDTFKLADGQ---NELAVPFVFEK-DGVTFRKIFVLKRGAYDIAVN 179 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEKSS 241 + N S I P G+ +RH T + +KYS D+EK++ Sbjct: 180 FEIDNQSDKTIEVEPYGQ-LRHTLVEDTGNVAMPTYTGGAYSSSETNYKKYSFADMEKAN 238 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP-GK 300 +S W+ + Y+ S +IP+++ +Q L+D + +T +P G Sbjct: 239 LS-ISTKAGWVAVLQHYFVSAWIPNQDAD--NQLYSLTDKANNLASIGYRGPVTAIPAGA 295 Query: 301 SITTTNFLFAGAK---EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 T + L+ G K + T+ ++ ++ +D+GW +FIAKP+F L+++ ++V Sbjct: 296 KETIRSSLWTGPKLQDQMATVANH--------LDLSVDYGWAWFIAKPLFWLLTFIQSIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F + Q + + M++ Sbjct: 348 QNWGLAIIGVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERFGED-RQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD-------- 458 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 P+Y I PI+M SMF+ KMSP P AD Q I+N+MP++F+ FP+ Sbjct: 459 ---PYY--------ILPILMGASMFLLQKMSPTPVADPTQQKIMNFMPLIFMVFFLWFPS 507 Query: 537 GLIIYWSWSNVISIVQQAVIMK 558 GL++YW SN+I+I QQ +I + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYR 529 >gi|307246347|ref|ZP_07528425.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255333|ref|ZP_07537145.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259783|ref|ZP_07541503.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852757|gb|EFM84984.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861720|gb|EFM93702.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866173|gb|EFM98041.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 533 Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 128/399 (32%), Positives = 218/399 (54%), Gaps = 34/399 (8%) Query: 164 NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 + +L+ +T L Y + V N + + P G+I +H ++ + + Sbjct: 153 DGVLYTKTFVLKRGSYDVAVNFNVKNQTAATVEVQPYGQI-KHTLLESSGSLTMPTYTGG 211 Query: 223 VLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 +KYS D+EK+++ + + W+ + Y+ S ++P+++ ++ + ++ Sbjct: 212 AYSSAETNYKKYSFQDMEKANL-DINTKAGWVALLQHYFVSAWVPNQDAE-NTIYSRTNN 269 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G A + TI P T T+ L+ G K+ E + ++ +D+GW + Sbjct: 270 GIATI--GYRGPVTTIAPNSEATITSQLWTGPKD-----QKEMEATAANLDLTVDYGWVW 322 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIAKP+F L+++ ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+R Sbjct: 323 FIAKPLFALLTFIQSIVTNWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMR 382 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+G Sbjct: 383 ERFGDD-RQRMSQEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFG 441 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI+DL+A D P+Y I P++M SMF+ KMSP P D Q + Sbjct: 442 WIQDLSAQD-----------PYY--------ILPLLMGASMFLLQKMSPSPVTDPVQQKV 482 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +MPV+F FP+GL++YW SN+I+IVQQ +I + Sbjct: 483 MTFMPVMFTVFFLWFPSGLVLYWLTSNIITIVQQWLIYR 521 >gi|320354720|ref|YP_004196059.1| protein translocase subunit YidC [Desulfobulbus propionicus DSM 2032] gi|320123222|gb|ADW18768.1| protein translocase subunit yidC [Desulfobulbus propionicus DSM 2032] Length = 549 Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 166/572 (29%), Positives = 276/572 (48%), Gaps = 40/572 (6%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 + F+AI LS +I+ +Q F+V P + + Q NQ A A Sbjct: 4 YRAFLAIVLSFLILIGYQYFFVKPVPPQPQAPGQATQAASSANQQTAGGAPAAATGIAAT 63 Query: 65 LS------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYH-LDVSSNSPIVTLLSPSNTK 117 S ++ V + P IN +G L+ Y + P+ ++ Sbjct: 64 PSTVAVDPLAHDVTVDTPLYTAVINEQGGGVKGFVLKSYRSTNAEDAGPMQLIIGKGPAD 123 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DE 176 LD LP N ++ T + + A+ I RT++ + Sbjct: 124 APVLFSLD---NGAGTVLPTYTADKNAVTLTNQGDTGTLTMTAALADGIAIVRTLTFRGD 180 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMR----HKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 YL + V+N + ++ SP ++ H +T+ F ++ ++ LVE Sbjct: 181 SYLINVEYKVSNTTDRPVQVSPALTMVNEPFAHASETSKYLFAGPAAYV----NEKLVET 236 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 K + ++ + SW G D Y+ + P+ + + L + + S Sbjct: 237 KAKKLTEAPVV-LQGKVSWTGYVDNYFMTTVAPAVG---NGRTITLQGSEQQVRTVLSEG 292 Query: 293 EITILP--GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 TI P GKS T L+ G K+ + DLA +D+GWF +AKPM L+ Sbjct: 293 IQTIGPHEGKSFAYT--LYFGPKKLQVLQTAGSDLA-----KAVDFGWFDVLAKPMLWLL 345 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++F+ N+G+AI+L T+ +KL+F+P+ +K S NM+ +QPKI +LRE+FK P ++ Sbjct: 346 NFFHQFSHNYGVAIILLTILIKLIFWPITQKGMKSMKNMQKLQPKIAKLRERFKDDPAKM 405 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 Q+ M+ LYKT+ +NP+ GC P+L+QIP FFA+Y+V+ ++E+RHAPF WI DL+A D Sbjct: 406 NQE-MMTLYKTYKVNPVGGCLPMLIQIPFFFALYRVLMAAIELRHAPFMLWINDLSAPDR 464 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I F +P + I ++M SM++Q KM+P AD QA I+ ++P+VF F Sbjct: 465 LWI-------GFDIPYLHGIPILTLLMGASMYLQQKMTPTTADPTQARIMQFLPIVFTFM 517 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +F +GL++YW +N++SI+QQ +I + + A Sbjct: 518 FINFASGLVLYWFVNNLLSILQQYLINRQNKA 549 >gi|190150778|ref|YP_001969303.1| inner membrane protein OxaA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250854|ref|ZP_07337047.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253770|ref|ZP_07339905.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248474|ref|ZP_07530494.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|254772740|sp|B3H2D6|OXAA_ACTP7 RecName: Full=Inner membrane protein oxaA gi|189915909|gb|ACE62161.1| inner membrane protein OxaA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302647354|gb|EFL77575.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650269|gb|EFL80432.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306855042|gb|EFM87225.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 542 Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 128/399 (32%), Positives = 218/399 (54%), Gaps = 34/399 (8%) Query: 164 NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 + +L+ +T L Y + V N + + P G+I +H ++ + + Sbjct: 162 DGVLYTKTFVLKRGSYDVAVNFNVKNQTAATVEVQPYGQI-KHTLLESSGSLTMPTYTGG 220 Query: 223 VLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 +KYS D+EK+++ + + W+ + Y+ S ++P+++ ++ + ++ Sbjct: 221 AYSSAETNYKKYSFQDMEKANL-DINTKAGWVALLQHYFVSAWVPNQDAE-NTIYSRTNN 278 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G A + TI P T T+ L+ G K+ E + ++ +D+GW + Sbjct: 279 GIATI--GYRGPVTTIAPNSEATITSQLWTGPKD-----QKEMEATAANLDLTVDYGWAW 331 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIAKP+F L+++ ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+R Sbjct: 332 FIAKPLFALLTFIQSIVTNWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMR 391 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+G Sbjct: 392 ERFGDD-RQRMSQEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFG 450 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI+DL+A D P+Y I P++M SMF+ KMSP P D Q + Sbjct: 451 WIQDLSAQD-----------PYY--------ILPLLMGASMFLLQKMSPSPVTDPVQQKV 491 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +MPV+F FP+GL++YW SN+I+IVQQ +I + Sbjct: 492 MTFMPVMFTVFFLWFPSGLVLYWLTSNIITIVQQWLIYR 530 >gi|46143583|ref|ZP_00134946.2| COG0706: Preprotein translocase subunit YidC [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 542 Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 128/399 (32%), Positives = 218/399 (54%), Gaps = 34/399 (8%) Query: 164 NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 + +L+ +T L Y + V N + + P G+I +H ++ + + Sbjct: 162 DGVLYTKTFVLKRGSYDVAVNFNVKNQTAATVEVQPYGQI-KHTLLESSGSLTMPTYTGG 220 Query: 223 VLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 +KYS D+EK+++ + + W+ + Y+ S ++P+++ ++ + ++ Sbjct: 221 AYSSAETNYKKYSFQDMEKANL-DINTKAGWVALLQHYFVSAWVPNQDAE-NTIYSRTNN 278 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G A + TI P T T+ L+ G K+ E + ++ +D+GW + Sbjct: 279 GIATI--GYRGPVTTIAPNSEATITSQLWTGPKD-----QKEMEATAANLDLTVDYGWAW 331 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIAKP+F L+++ ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+R Sbjct: 332 FIAKPLFALLTFIQSIVTNWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMR 391 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+G Sbjct: 392 ERFGDD-RQRMSQEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFG 450 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI+DL+A D P+Y I P++M SMF+ KMSP P D Q + Sbjct: 451 WIQDLSAQD-----------PYY--------ILPLLMGASMFLLQKMSPSPVTDPVQQKV 491 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +MPV+F FP+GL++YW SN+I+IVQQ +I + Sbjct: 492 MTFMPVMFTVFFLWFPSGLVLYWLTSNIITIVQQWLIYR 530 >gi|260581921|ref|ZP_05849717.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus influenzae NT127] gi|260095114|gb|EEW79006.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus influenzae NT127] Length = 541 Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 119/327 (36%), Positives = 195/327 (59%), Gaps = 30/327 (9%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSAN 292 +SD++ +++S W+ + Y+ S +IP+++ ++Q ++D + + Sbjct: 231 FSDMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGP 287 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 +TI G T T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ Sbjct: 288 VVTIPAGSQETITSSLWTG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTF 342 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + Sbjct: 343 IQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-RQRMS 401 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D Sbjct: 402 QEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD--- 458 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 P+Y I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F Sbjct: 459 --------PYY--------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFF 502 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++YW SN+I+I QQ +I + Sbjct: 503 LWFPSGLVLYWLVSNLITIAQQQLIYR 529 >gi|238899054|ref|YP_002924736.1| protein involved in protein translocation and folding, substrates includes ATP synthase, SecYEG, LacY [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466814|gb|ACQ68588.1| protein involved in protein translocation and folding, substrates includes ATP synthase, SecYEG, LacY [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 547 Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 130/413 (31%), Positives = 227/413 (54%), Gaps = 39/413 (9%) Query: 156 IKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQ 208 I L F + N ++ +T L + Y +++ + N S + F+ G++ +H+ Sbjct: 150 IPLTFTDKNGLVLTKTFILKRNDYAIRVLYRINNASSTPLEFNFFGQLKQSTQLPKHR-D 208 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPS 266 TA++ F + A K +KYS DIE +++ N W+ + +Y+A+ +IP+ Sbjct: 209 TASSNFALHTYRGAAYSSKEDKYKKYSFSDIEDANL-NITTQGGWVAMLQQYFATAWIPN 267 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + ++L GH + F + + + PG+ + L+ G P + +A Sbjct: 268 AGETHDFYSRHL--GHGLVASGFKSLPVLVNPGEQKELSATLWVG----PELQDKMAVIA 321 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + + VGN+G++I+L T V+ + +PL K QY S Sbjct: 322 -PHLDLTVDYGWLWFISQPLFKLLKFIHGFVGNWGLSIILITFIVRGIMYPLTKAQYTSM 380 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPK+ E+RE+ Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y + Sbjct: 381 AKMRMLQPKLTEMRERIGDD-RQRMSQEMMALYKSEKVNPLGGCLPLIIQMPIFLALYYM 439 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + S+E+RHAPF WI DL+A D P+Y I PI+M L+M+ K Sbjct: 440 LMGSVELRHAPFILWIHDLSAQD-----------PYY--------ILPILMGLTMYFIQK 480 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MSP D Q I+N+MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 481 MSPSTITDPMQKKIMNFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|300705597|ref|YP_003747200.1| cytoplasmic insertase, essential for proper integration of ATPase into the membrane [Ralstonia solanacearum CFBP2957] gi|299073261|emb|CBJ44620.1| cytoplasmic insertase, essential for proper integration of ATPase into the membrane [Ralstonia solanacearum CFBP2957] Length = 554 Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 123/329 (37%), Positives = 188/329 (57%), Gaps = 28/329 (8%) Query: 234 YSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 ++DI+K ++S W+ + Y+AS +IP+ S ++ Y+ Sbjct: 244 FADIDKGKAQVPGATDSGWVAMVQHYFASAWIPA--ASVKREYYVDRVDTNFYRIGIQEP 301 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 T+ PG S++ T LFAG +E + P +++ D+GW IAKP+F L+ Sbjct: 302 LGTVAPGASLSATARLFAGPQEARMLEGIT-----PGLDLVKDYGWLTVIAKPLFWLLEK 356 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + L+GN+G +I+ TV +KL+FFPL+ Y S A MK++QP++ +RE+ K PQ + Sbjct: 357 IHALLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGD-PQKMN 415 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+ LY+T +NPL GC PIL+QIPVF A+Y + S+EMR AP+ GW+ DLA+ D Sbjct: 416 QEMMTLYRTEKVNPLGGCLPILIQIPVFMALYWALLSSVEMRGAPWLGWVHDLASPD--- 472 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 PFY I PI+M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 473 --------PFY--------ILPILMAVSMFVQTKLNPTPPDPVQAKMMMFMPLAFSVMFF 516 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++YW +N +SI QQ I +M G Sbjct: 517 FFPAGLVLYWVVNNCLSIAQQWSINRMLG 545 >gi|307250692|ref|ZP_07532629.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307257502|ref|ZP_07539268.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306857300|gb|EFM89419.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306864014|gb|EFM95931.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 533 Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 128/399 (32%), Positives = 218/399 (54%), Gaps = 34/399 (8%) Query: 164 NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 + +L+ +T L Y + V N + + P G+I +H ++ + + Sbjct: 153 DGVLYTKTFVLKRGSYDVAVNFNVKNQTAATVEVQPYGQI-KHTLLESSGSLTMPTYTGG 211 Query: 223 VLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 +KYS D+EK+++ + + W+ + Y+ S ++P+++ ++ + ++ Sbjct: 212 AYSSAETNYKKYSFQDMEKANL-DINTKAGWVALLQHYFVSAWVPNQDAE-NTIYSRTNN 269 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G A + TI P T T+ L+ G K+ E + ++ +D+GW + Sbjct: 270 GIATI--GYRGPVTTIAPNSEATITSQLWTGPKD-----QKEMEATAANLDLTVDYGWAW 322 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIAKP+F L+++ ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+R Sbjct: 323 FIAKPLFALLTFIQSIVTNWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMR 382 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+G Sbjct: 383 ERFGDD-RQRMSQEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFG 441 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI+DL+A D P+Y I P++M SMF+ KMSP P D Q + Sbjct: 442 WIQDLSAQD-----------PYY--------ILPLLMGASMFLLQKMSPSPVTDPVQQKV 482 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +MPV+F FP+GL++YW SN+I+IVQQ +I + Sbjct: 483 MTFMPVMFTVFFLWFPSGLVLYWLTSNIITIVQQWLIYR 521 >gi|119900278|ref|YP_935491.1| propable 60 Kd inner-membrane protein [Azoarcus sp. BH72] gi|119672691|emb|CAL96605.1| propable 60 Kd inner-membrane protein [Azoarcus sp. BH72] Length = 538 Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 147/499 (29%), Positives = 235/499 (47%), Gaps = 42/499 (8%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 RV++ L ++ +G L L + + LL ++ Y AE + T Sbjct: 62 RVKVVTDVLQAEVSAEGGSIVRLELEKHRATTDRSRGF--LLLDDGERHLYAAESGLIGT 119 Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFK----NANNILFERTISLDE-HYLFKIVD 184 LP T + L +G + +LV + N + + ++ YL + Sbjct: 120 G----LPTHRTRFALPAGDQVLKDGEDRLVLRLEAPEQNGVKVTKVMTFHRGSYLVDVNY 175 Query: 185 TVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSS 241 + N + ++ + R KP FGV G + K+SDI++ Sbjct: 176 EIANGGAEPVKAHAYYQFTRDGKPAEQVEAFGVTTFTGPAYYTDAAKFQKVKFSDIDEGK 235 Query: 242 ISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 +N W+ + Y+ ++P E ++ G Y A + + PG Sbjct: 236 AKFAKTANDGWVAMVQHYFVGAWLP--EAGVEREYFARKVGGDLYSAGAIESVADVQPGA 293 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + L+ G +E + + P ++++D+GW IA P+F +S + L GN+ Sbjct: 294 TGNAQARLYVGPQEQDKLENIA-----PGLDLVVDYGWLTVIAAPLFWALSALHKLTGNW 348 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+L TV +K LFFPL+ Y S A M+ + P++ ++E + + +Q+ M+ LY+ Sbjct: 349 GWAIILVTVALKALFFPLSAASYKSMAKMRVLGPRLQRMKELYGNDKVK-MQQEMMNLYR 407 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 T INPL GC PIL+QIPVF A+Y V+ S+EMR AP+ GWI+DL+A DP I Sbjct: 408 TEKINPLGGCLPILVQIPVFIALYWVLLGSVEMRQAPWLGWIQDLSAKDPYFIL------ 461 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 PIIM +SM +QMK++P P D QA ++ MP+VF F FP+GL++ Sbjct: 462 -------------PIIMGVSMLVQMKLNPTPPDPIQAKVMMAMPIVFTFMFLWFPSGLVL 508 Query: 541 YWSWSNVISIVQQAVIMKM 559 YW +NV+SI QQ I +M Sbjct: 509 YWVVNNVLSIAQQWQITRM 527 >gi|329894825|ref|ZP_08270625.1| OxaI/YidC membrane insertion protein [gamma proteobacterium IMCC3088] gi|328922719|gb|EGG30053.1| OxaI/YidC membrane insertion protein [gamma proteobacterium IMCC3088] Length = 554 Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 115/313 (36%), Positives = 178/313 (56%), Gaps = 27/313 (8%) Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 SW+ + Y+ S +IP+ + + DG A F + + PG + TT+ Sbjct: 260 QTQGSWIALIQHYFLSAWIPNPDKIHTYTTRVTKDGFNI--AGFLSPATVVAPGATATTS 317 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 L+ G K+ Y + P E+ +D+GW ++IA+P+F L++ + LVGN+G+AI+ Sbjct: 318 AQLYVGPKD-----QYTLEKISPFLELSVDYGWLWWIAQPLFWLLTKIHGLVGNWGVAII 372 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 L TV +K FF L+ Y S ANM+ +QPK+ ++RE++ Q +AM++LYK IN Sbjct: 373 LLTVLIKGAFFKLSAASYRSMANMRRVQPKMADIREQYADD-KQKQSQAMMELYKKEKIN 431 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P+ GC PIL+Q+PVF A+Y + S+E+RHAPF WI DL+ DP + Sbjct: 432 PMGGCLPILVQMPVFIALYWTLMESVELRHAPFALWINDLSVMDPYFVL----------- 480 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 PI+M SM+ K++PPP D QA ++ W+P+VF F FPAGL++YW + Sbjct: 481 --------PILMGASMWFMQKLNPPPPDPMQAKLMQWLPIVFTFFFLWFPAGLVLYWVVN 532 Query: 546 NVISIVQQAVIMK 558 N++S+ QQ +I K Sbjct: 533 NLLSMTQQYIITK 545 >gi|307253082|ref|ZP_07534965.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307264104|ref|ZP_07545701.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306859451|gb|EFM91481.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306870582|gb|EFN02329.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 533 Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 128/399 (32%), Positives = 218/399 (54%), Gaps = 34/399 (8%) Query: 164 NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 + +L+ +T L Y + V N + + P G+I +H ++ + + Sbjct: 153 DGVLYTKTFVLKRGSYDVAVNFNVKNQTAATVEVQPYGQI-KHTLLESSGSLTMPTYTGG 211 Query: 223 VLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 +KYS D+EK+++ + + W+ + Y+ S ++P+++ ++ + ++ Sbjct: 212 AYSSAETNYKKYSFQDMEKANL-DINTKAGWVALLQHYFVSAWVPNQDAE-NTIYSRTNN 269 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G A + TI P T T+ L+ G K+ E + ++ +D+GW + Sbjct: 270 GIATI--GYRGPVTTIAPNSEATITSQLWTGPKD-----QKEMEATAANLDLTVDYGWAW 322 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIAKP+F L+++ ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+R Sbjct: 323 FIAKPLFALLTFIQSIVTNWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMR 382 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+G Sbjct: 383 ERFGDD-RQRMSQEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFG 441 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI+DL+A D P+Y I P++M SMF+ KMSP P D Q + Sbjct: 442 WIQDLSAQD-----------PYY--------ILPLLMGASMFLLQKMSPSPVTDPVQQKV 482 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +MPV+F FP+GL++YW SN+I+IVQQ +I + Sbjct: 483 MTFMPVMFTVFFLWFPSGLVLYWLTSNIITIVQQWLIYR 521 >gi|167587875|ref|ZP_02380263.1| putative inner membrane protein translocase component YidC [Burkholderia ubonensis Bu] Length = 504 Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 160/499 (32%), Positives = 247/499 (49%), Gaps = 57/499 (11%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D +TL + Y A + + PN N Sbjct: 41 GEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFD-HTASHTYLARTGLLGG----DFPNHN 94 Query: 140 TVWNLISGKILTPTT------PIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSI 191 V++ ++ PTT +KL F++ + +T + VDT +N + Sbjct: 95 DVYSQVNAG---PTTLSGDQNALKLSFESPVKGGVKVVKTYTFTRGSYVIDVDTKIDN-V 150 Query: 192 DQIRFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGD-KSLVEQKYSDIEKSSISNFHES 248 SP + + TA T F+ AV D K + +SD++K+ +NF +S Sbjct: 151 GTAPVSPTVYMELVRDNTAVETPMFSHTFLGPAVYTDSKHFQKIDFSDLDKNK-ANFEKS 209 Query: 249 --NSWLGISDKYWASVFIPS---KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N W+ + Y+AS +IP K + +F A Y+ I PG+S Sbjct: 210 ADNGWVAMVQHYFASAWIPKQGVKRDIYAEKFD-----PALYRVGVKQPVGAIAPGQSAD 264 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G A Sbjct: 265 VSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWA 319 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT Sbjct: 320 IVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEK 378 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D PF+ Sbjct: 379 VNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRD-----------PFF 427 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 I P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 428 --------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYV 479 Query: 544 WSNVISIVQQAVIMKMHGA 562 +NV+SI QQ I + G Sbjct: 480 VNNVLSIAQQYYITRKLGG 498 >gi|325577779|ref|ZP_08148054.1| YidC/Oxa1 family membrane protein insertase [Haemophilus parainfluenzae ATCC 33392] gi|325160524|gb|EGC72650.1| YidC/Oxa1 family membrane protein insertase [Haemophilus parainfluenzae ATCC 33392] Length = 542 Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 125/376 (33%), Positives = 214/376 (56%), Gaps = 31/376 (8%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 + N S I P G++ +++ N G + + + +SD++ ++S Sbjct: 183 IVNQSGSAIEVEPYGQLKHTLVESSGNVAMPTYTGGAYSSSETNYKKYSFSDMKDKNLS- 241 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSANEITILPGKSIT 303 W+ + Y+ S +IP+++ ++Q ++D + + ++I G + T Sbjct: 242 IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYSITDSKNNVASIGYRGPVVSIPAGATET 299 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G P + + ++A ++ +D+GW +FIAKP+F L+++ ++V N+G+A Sbjct: 300 ITSSLWTG----PKLQNKMAEVA-NHLDLTVDYGWAWFIAKPLFWLLTFIQSIVSNWGVA 354 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK Sbjct: 355 IICVTLVVKAILYPLTKAQYTSMAKMRMLQPKMQEMRERFGDD-RQRMSQEMMKLYKEEK 413 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC P++LQ+P+F A+Y ++E+RHAPF+GWI+DL+A D P+Y Sbjct: 414 VNPLGGCLPLILQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQD-----------PYY 462 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M SMF+ KMSP P AD Q ++N+MP++F+F FPAGL++YW Sbjct: 463 --------ILPILMGGSMFLLQKMSPTPVADPMQQKVMNFMPLIFMFFFLWFPAGLVLYW 514 Query: 543 SWSNVISIVQQAVIMK 558 SN+I+IVQQ +I + Sbjct: 515 LVSNLITIVQQQMIYR 530 >gi|255020154|ref|ZP_05292223.1| OxaI/YidC membrane insertion protein [Acidithiobacillus caldus ATCC 51756] gi|254970296|gb|EET27789.1| OxaI/YidC membrane insertion protein [Acidithiobacillus caldus ATCC 51756] Length = 538 Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 153/506 (30%), Positives = 257/506 (50%), Gaps = 65/506 (12%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK----NAY 120 L+ +P V GS++L G L L+ Y S +P +L+P + + + Sbjct: 80 LAAAPSVPFATQVYQGSVSLLGGDIVHLGLKHYPTSSSDKAP-YPILTPESARLTLQQSG 138 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKI-LTPTTPIKLVFKN-ANNILFERTISLD-EH 177 F LD ++ G+ L T L+F+ A + E+T+ + Sbjct: 139 FRALD----------------GQILQGRYRLLQDTGHTLIFQGEAGPLRIEKTLEFAPDS 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 YL VTN S +I+R+ + + G + ++ + S E+ +SD+ Sbjct: 183 YLIHETVRVTNGGSSDWNGSYLDQILRNDRSESHWFMSIFTGAV-LMHNGSFSEKSFSDL 241 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 +S ++ S W G++D Y+ +P + + +AR + S + + Sbjct: 242 -RSHPEDWSGSG-WAGMTDHYFLEAILPEPKAT--------GQIYARAEGPNSVAGVAVA 291 Query: 298 -----PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 PG+S T L+ G KE T+ + L E +D+GWF IA+PM ++S+ Sbjct: 292 LPRLAPGQSTTIEQDLYLGPKEQKTLSSLGRGL-----EQTVDYGWFAIIAEPMHGVLSW 346 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F++ GN+G+AI+L + VK+LFF + Y S ANM+ +QPK++++++++ + Q + Sbjct: 347 FHSWTGNWGLAIVLLVLAVKILFFYPSAISYRSMANMRKLQPKLEQIKKQYGEDR-QKMG 405 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 AM++LY++ +NP+AGC PI++Q+PVF A+Y V+ S+ +R APF WI DLAA D Sbjct: 406 AAMMELYRSEKVNPMAGCLPIVIQMPVFIALYWVLVESVSLRMAPFVLWIHDLAAPD--- 462 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 P+Y I P++M +SMFIQ +++P P D Q IL+ +PV+F S Sbjct: 463 --------PYY--------ILPLLMGVSMFIQQRLNPAPMDPMQKKILSALPVIFAIFFS 506 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +NV+SI QQ +I + Sbjct: 507 FFPAGLVLYWLTNNVVSIAQQYLITR 532 >gi|319775066|ref|YP_004137554.1| Inner membrane protein oxaA [Haemophilus influenzae F3047] gi|317449657|emb|CBY85863.1| Inner membrane protein oxaA [Haemophilus influenzae F3047] Length = 541 Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 126/376 (33%), Positives = 211/376 (56%), Gaps = 31/376 (8%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 + N S I P G++ +++ N G + + + +SD++ +++S Sbjct: 182 IDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETNYKKYSFSDMQDNNLS- 240 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSANEITILPGKSIT 303 W+ + Y+ S +IP+++ ++Q ++D + + + +TI G T Sbjct: 241 IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGSVVTIPAGSQET 298 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ +V N+G+A Sbjct: 299 ITSSLWTG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTFIQGIVSNWGLA 353 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPK+ E+RE F Q + + M++LYK Sbjct: 354 IICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRECFGDD-RQRMSQEMMKLYKEEK 412 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D P+Y Sbjct: 413 VNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD-----------PYY 461 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+GL++YW Sbjct: 462 --------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPSGLVLYW 513 Query: 543 SWSNVISIVQQAVIMK 558 SN+I+I QQ +I + Sbjct: 514 LVSNLITIAQQQLIYR 529 >gi|312797629|ref|YP_004030551.1| 60 kDa inner membrane protein YIDC [Burkholderia rhizoxinica HKI 454] gi|312169404|emb|CBW76407.1| 60 kDa inner membrane protein YIDC [Burkholderia rhizoxinica HKI 454] Length = 554 Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 145/447 (32%), Positives = 230/447 (51%), Gaps = 54/447 (12%) Query: 134 ELPNSNTVWNLISGKI----------LTPTTPIKLVFKNANNILFERTISLDEHYLFKIV 183 + PN N V+ ++ G ++ +P+K K F R Y+ + Sbjct: 142 DFPNHNDVFTVVPGPTSLTDGANTVSISLESPVKAGVKVVKTYTFTRG-----SYVIGVD 196 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGDKSLVEQ-KYSDIEKS 240 + N ++ + ++R T F FI AV ++ ++ +SD++K Sbjct: 197 TKIENVGAAPVKPTVYMELVRDDTPVETPRF--SHTFIGPAVYTEQHKFQKMSFSDLDKG 254 Query: 241 SISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 ++ S N W+ + Y+AS +IP KE + QF A Y+ +I P Sbjct: 255 K-QDYAPSADNGWVAMVQHYFASAWIP-KEGA-QRQFYADKFSQALYRVGMKEPVQSIAP 311 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G+S+ LFAG +E E+ L P E++ D+GW IAKP+F L+ + Sbjct: 312 GQSVNVAARLFAGPQE-------ERKLEKIAPGLELVKDYGWVTIIAKPLFWLLEKIHGF 364 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ ++RE+FK S PQ + A++ Sbjct: 365 VGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQQIRERFK-SDPQKMNAALM 423 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK+ +NP GC PI++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 424 ELYKSEKVNPFGGCLPIVIQIPVFISLYWVLLSSVEMRGAPWVLWIHDLSQQDPYFIL-- 481 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 P++M++SMF+Q K++P P D QA ++ +MP+ F FPA Sbjct: 482 -----------------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPA 524 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++Y+ +NV+SI QQ I +M G + Sbjct: 525 GLVLYYVVNNVLSIAQQYYITRMMGKD 551 >gi|197120418|ref|YP_002140845.1| preprotein translocase subunit YidC [Geobacter bemidjiensis Bem] gi|254772787|sp|B5EGX9|OXAA_GEOBB RecName: Full=Inner membrane protein oxaA gi|197089778|gb|ACH41049.1| preprotein translocase subunit YidC [Geobacter bemidjiensis Bem] Length = 537 Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 128/360 (35%), Positives = 197/360 (54%), Gaps = 42/360 (11%) Query: 199 RGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKY 258 GR H P T + EG + V K ++ K+ + + + +W +DKY Sbjct: 216 EGRYEVHAPST------LSEGKVKV--------DKLDNLLKNPV-QYGKDIAWSAFADKY 260 Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 + I K + SQ + + Q + +T+ PG+ ++ G K+ + Sbjct: 261 FMDGIIADKGSI--SQVRITRPANDAIQRDIVSPTVTVAPGQRSAVNYAVYYGPKDLDIL 318 Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 L R + +ID+GWF IAKP+ + + Y GN+GIAI++ T +KL+FFPL Sbjct: 319 K-----LQGNRLDEVIDYGWFGPIAKPLVHSLKFLYKYTGNYGIAIIIITFILKLVFFPL 373 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 K Y S +M+ +QPK+ EL+EKFK + +A+++LYKTH +NPL GC P+++QIP Sbjct: 374 THKSYKSMKDMQKLQPKMTELKEKFKNDR-DAMNRAVMELYKTHKVNPLGGCLPMVVQIP 432 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 VFF +Y+ + S+E+RHAPF+ WI DL+A D P+Y + PIIM Sbjct: 433 VFFGLYRALMYSIELRHAPFYLWITDLSAKD-----------PYY--------VTPIIMG 473 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++MFIQ KM+P D QA ++ +P+VF F +FP+GL+IYW +NV++I QQ I K Sbjct: 474 VTMFIQQKMTPTNMDPVQAKMMLMLPIVFTFMFLNFPSGLVIYWLVNNVLTIAQQMYINK 533 >gi|223041690|ref|ZP_03611886.1| inner membrane protein OxaA [Actinobacillus minor 202] gi|198246541|gb|ACH82230.1| inner membrane protein OxaA [Actinobacillus minor 202] Length = 554 Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 152/514 (29%), Positives = 256/514 (49%), Gaps = 57/514 (11%) Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A++ S + +++ L +++ G D +L +H ++ SN+P L N+K Y Sbjct: 59 AESNSKGKTITIESDVLRLTVDTLGGDVIDSDLLKHHAELHSNTPFELL--QDNSKVLYI 116 Query: 122 AELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIK--LVFKNANNILFERTISLDEH 177 A+ + N I+ N + + K+ I L F+ + +++ +T +L Sbjct: 117 AQSGLIG-KNGIDTNNGRAQYQTTADSFKLADGQNEISVPLTFEK-DGVVYTKTFTLKRG 174 Query: 178 YLFKIVD-TVTNNSIDQIRFSPRGRIMRHK----------PQTATNTFGVQEGFIAVLGD 226 VD + NNS + + P G+ ++H P + E Sbjct: 175 SYNVGVDFNIKNNSAEAVEVQPYGQ-LKHTLVESSGSLTMPTYTGGAYSSSETNYKKYSF 233 Query: 227 KSLVEQKYSDIEKSSISNFH---ESNS-WLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + ++K E+ I+N ESN+ W+ I Y+ S ++P ++ + +G Sbjct: 234 QEMADEKKRKAEQG-IANGGLSIESNTGWVAILQHYFVSAWVPQQDKPMTIYTRVSDNGV 292 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFY 340 A + T+ P T + L+ G K+ +K++A ++ D+GW + Sbjct: 293 ATI--GYRGALTTVAPNSDATISTHLWTGPKD-------QKEMAETAAHLDLTADYGWAW 343 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIAKP+F L++ +V N+G+AI+ T+ VK L +PL K QY S A M+ +QP+I E+R Sbjct: 344 FIAKPLFWLLTNIQKVVINWGLAIICVTIVVKTLLYPLTKAQYTSMAKMRMLQPRIQEMR 403 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+G Sbjct: 404 ERFGDD-RQRMSQEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFG 462 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI+DL+A D P+Y I P++M SMF+ KMSP P AD Q + Sbjct: 463 WIQDLSAQD-----------PYY--------ILPLLMGGSMFLLQKMSPTPVADPVQQKV 503 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + +MPV+F FP+GL++YW SN I+I QQ Sbjct: 504 MTFMPVMFTVFFLWFPSGLVLYWLTSNCITIAQQ 537 >gi|301154699|emb|CBW14162.1| cytoplasmic insertase into membrane protein, Sec system [Haemophilus parainfluenzae T3T1] Length = 542 Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 124/376 (32%), Positives = 214/376 (56%), Gaps = 31/376 (8%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 + N S I P G++ +++ N G + + + +SD++ ++S Sbjct: 183 IVNQSGSAIEVEPYGQLKHTLVESSGNVAMPTYTGGAYSSSETNYKKYSFSDMKDKNLS- 241 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSANEITILPGKSIT 303 W+ + Y+ S +IP+++ ++Q ++D + + +++ G + T Sbjct: 242 IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYSITDSKNNVASIGYRGPVVSVPAGATET 299 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G P + + ++A ++ +D+GW +FIAKP+F L+++ ++V N+G+A Sbjct: 300 ITSSLWTG----PKLQNKMAEVA-NHLDLTVDYGWAWFIAKPLFWLLTFIQSIVSNWGVA 354 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK Sbjct: 355 IICVTLVVKAILYPLTKAQYTSMAKMRMLQPKMQEMRERFGDD-RQRMSQEMMKLYKEEK 413 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC P++LQ+P+F A+Y ++E+RHAPF+GWI+DL+A D P+Y Sbjct: 414 VNPLGGCLPLILQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQD-----------PYY 462 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M SMF+ KMSP P AD Q ++N+MP++F+F FPAGL++YW Sbjct: 463 --------ILPILMGGSMFLLQKMSPTPVADPMQQKVMNFMPLIFMFFFLWFPAGLVLYW 514 Query: 543 SWSNVISIVQQAVIMK 558 SN+I+IVQQ +I + Sbjct: 515 LVSNLITIVQQQMIYR 530 >gi|299068432|emb|CBJ39656.1| cytoplasmic insertase, essential for proper integration of ATPase into the membrane [Ralstonia solanacearum CMR15] Length = 553 Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 119/329 (36%), Positives = 188/329 (57%), Gaps = 28/329 (8%) Query: 234 YSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 ++DI+K ++S W+ + Y+AS +IP+ + Y+ Sbjct: 243 FADIDKGKAQVPAPTDSGWVAMVQHYFASAWIPAANVKREYYVNRVDTNF--YRIGLQEP 300 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 T+ PG S++TT LFAG ++ + + P +++ D+GW +AKP+F L+ Sbjct: 301 LGTVAPGASVSTTARLFAGPQQARML-----EAITPGLDLVKDYGWLTIVAKPLFWLLEK 355 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + L+GN+G +I+ TV +KL+FFPL+ Y S A MK++QP++ +RE+ K PQ + Sbjct: 356 IHALLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGD-PQKMN 414 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+ LY+T +NPL GC PI++QIPVF A+Y + S+EMR AP+ GW+ DLA+ D Sbjct: 415 QEMMTLYRTEKVNPLGGCLPIMIQIPVFMALYWALLSSVEMRGAPWLGWVHDLASPD--- 471 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 PFY I PI+M++SMF+Q +++P P D QA ++ +MP+ F Sbjct: 472 --------PFY--------ILPILMAVSMFVQTRLNPTPPDPVQAKMMMFMPIAFSVMFF 515 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++YW +N +SI QQ I +M G Sbjct: 516 FFPAGLVLYWVVNNCLSIAQQWSINRMLG 544 >gi|145640676|ref|ZP_01796259.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae R3021] gi|145274602|gb|EDK14465.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 22.4-21] Length = 541 Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 125/376 (33%), Positives = 211/376 (56%), Gaps = 31/376 (8%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 + N S I P G++ +++ N G + + + ++D++ +++S Sbjct: 182 IDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETNYKKYSFADMQDNNLS- 240 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSANEITILPGKSIT 303 W+ + Y+ S +IP+++ ++Q ++D + + +TI G T Sbjct: 241 IGTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGPVVTIPSGSQET 298 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ +V N+G+A Sbjct: 299 ITSSLWTG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTFIQGIVSNWGLA 353 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK Sbjct: 354 IICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-RQRMSQEMMKLYKEEK 412 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D P+Y Sbjct: 413 VNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD-----------PYY 461 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+GL++YW Sbjct: 462 --------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPSGLVLYW 513 Query: 543 SWSNVISIVQQAVIMK 558 SN+I+I QQ +I + Sbjct: 514 LVSNLITIAQQQLIYR 529 >gi|187930818|ref|YP_001901305.1| putative inner membrane protein translocase component YidC [Ralstonia pickettii 12J] gi|309780186|ref|ZP_07674937.1| membrane protein insertase, YidC/Oxa1 family [Ralstonia sp. 5_7_47FAA] gi|254773015|sp|B2U820|OXAA_RALPJ RecName: Full=Inner membrane protein oxaA gi|187727708|gb|ACD28873.1| 60 kDa inner membrane insertion protein [Ralstonia pickettii 12J] gi|308920889|gb|EFP66535.1| membrane protein insertase, YidC/Oxa1 family [Ralstonia sp. 5_7_47FAA] Length = 554 Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 122/338 (36%), Positives = 191/338 (56%), Gaps = 29/338 (8%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 GDK + ++DI+K +NS W+ + Y+AS +IP+ + Sbjct: 236 GDK-FHKITFADIDKGKAQVPAPTNSGWVAMVQHYFASAWIPADNVKREYYVNRVDTNF- 293 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ T+ PG S++TT LFAG ++ + + P +++ D+GW +A Sbjct: 294 -YRIGIQEPLGTVAPGASVSTTARLFAGPQQARML-----EAITPGLDLVKDYGWLTIVA 347 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ + L+GN+G +I+ TV +KL+FFPL+ Y S A MK++QP++ +RE+ Sbjct: 348 KPLFWLLEKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRERH 407 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K PQ + + M+ LY+T +NPL GC PI++QIPVF A+Y + S+EMR AP+ GW+ Sbjct: 408 KGD-PQKMNQEMMTLYRTEKVNPLGGCLPIVIQIPVFMALYWALLSSVEMRGAPWIGWVH 466 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ D PFY I P++M++SMF+Q K++P P D QA ++ +M Sbjct: 467 DLSTPD-----------PFY--------ILPVLMAVSMFVQTKLNPTPPDPVQAKVMMFM 507 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P+ F FPAGL++YW +N +SI QQ I +M G Sbjct: 508 PIAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 545 >gi|51244707|ref|YP_064591.1| hypothetical protein DP0855 [Desulfotalea psychrophila LSv54] gi|50875744|emb|CAG35584.1| conserved hypothetical membrane protein [Desulfotalea psychrophila LSv54] Length = 553 Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 167/569 (29%), Positives = 272/569 (47%), Gaps = 53/569 (9%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV------KQPNQVDNSYAAVLIDDR 61 +AI +S I++ +Q Y +P +++ QT KQ + A V+ Sbjct: 7 LLAIVISFAILFGYQ--YFFPGLDQPVQTTSETQTTVNGTSAKQAGAIQEITAPVIPVVA 64 Query: 62 AQALSMSPRVELKNPSL-IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN-- 118 + PR + + L +I+ G L+ + +SP + L++ S T Sbjct: 65 SAKYDRVPRDIVVDTDLYTATISEAGGALKSFVLKEQKETNAEDSPGMQLVNNSKTDGYP 124 Query: 119 -------AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 A + L Y S + + SN LI + K++ ++ ER Sbjct: 125 LTFSWGGAAPSNLLYTSQDSEVRF-GSNGKARLI------------MTAKSSTGLVIERV 171 Query: 172 ISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA--VLGDKS 228 + D+ YLF + V N S ++ S + + ++ + + F+ V D Sbjct: 172 YTFDKKTYLFDLDVRVVNQSGQALQGSAQLHQVSVPYESTEDNPAARFLFMGPVVYADGE 231 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 L E D+E S F WLG +Y+ S+ +P Q + + G A Sbjct: 232 LTEIDPKDLEDGPQS-FMGDIQWLGYESRYFMSMIVPY---GLDGQ-TFTTSGGADLTKS 286 Query: 289 FSANEI-TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F A + T+ G + G K+ + DL + +++GWF IAKP Sbjct: 287 FIAGGLDTLAAGAEKEYKYHVLYGPKKVEMLKSAGYDL-----DKAVNFGWFDIIAKPTL 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+++F++ N+GIAI+L T+ K +F+P+ +K S NM+ +QPK+ L+EK K P Sbjct: 342 WLLNFFHSFTHNYGIAIILVTIMFKGIFWPITQKGMKSMKNMQKLQPKMAALKEKHKDDP 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + + K ++ LYK + +NPL GC P++LQIPVFFA+YKV+ +S+E+RHAPF WI DL+A Sbjct: 402 TR-MNKEVMSLYKAYKVNPLGGCLPMVLQIPVFFALYKVLLLSIELRHAPFMFWITDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 D I F LP + + ++M SMF+Q K SP AD QA I+ ++PVVF Sbjct: 461 PDRLWI-------GFNLPYLGGLPVLTLLMGASMFLQQKFSPTTADPTQAKIMMFLPVVF 513 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVI 556 F +F +GL++YW +N++SI+QQ +I Sbjct: 514 TFMFLNFASGLVLYWFVNNLLSILQQVLI 542 >gi|165976859|ref|YP_001652452.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|254772741|sp|B0BR23|OXAA_ACTPJ RecName: Full=Inner membrane protein oxaA gi|165876960|gb|ABY70008.1| 60 kD inner-membrane protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 542 Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 126/398 (31%), Positives = 218/398 (54%), Gaps = 32/398 (8%) Query: 164 NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFI 221 + +L+ +T L Y + V N + + P G+I +++ + T G Sbjct: 162 DGVLYTKTFVLKRGSYDVAVNFNVKNQTAATVEVQPYGQIKYTLLESSGSLTMPTYTGGA 221 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 + + + + D+EK+++ + + W+ + Y+ S ++P+++ ++ + ++G Sbjct: 222 YSSAETNYKKYSFQDMEKANL-DINTKAGWVALLQHYFVSAWVPNQDAE-NTIYSRTNNG 279 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 A + TI P T T+ L+ G K+ E + ++ +D+GW +F Sbjct: 280 IATI--GYRGPVTTIAPNSEATITSQLWTGPKD-----QKEMEATAANLDLTVDYGWAWF 332 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+F L+++ ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+RE Sbjct: 333 IAKPLFALLTFIQSIVTNWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRE 392 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 +F Q + + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GW Sbjct: 393 RFGDD-RQRMSQEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGW 451 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL 520 I+DL+A D P+Y I P++M SMF+ KMSP P D Q ++ Sbjct: 452 IQDLSAQD-----------PYY--------ILPLLMGASMFLLQKMSPSPVTDPVQQKVM 492 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MPV+F FP+GL++YW SN+I+IVQQ +I + Sbjct: 493 TFMPVMFTVFFLWFPSGLVLYWLTSNIITIVQQWLIYR 530 >gi|68249585|ref|YP_248697.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 86-028NP] gi|229843940|ref|ZP_04464081.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 6P18H1] gi|81335986|sp|Q4QLR0|OXAA_HAEI8 RecName: Full=Inner membrane protein oxaA gi|68057784|gb|AAX88037.1| preprotein translocase subunit YidC [Haemophilus influenzae 86-028NP] gi|229812934|gb|EEP48622.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 6P18H1] Length = 541 Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 118/327 (36%), Positives = 195/327 (59%), Gaps = 30/327 (9%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSAN 292 ++D++ +++S W+ + Y+ S +IP+++ ++Q ++D + + Sbjct: 231 FADMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGP 287 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 +TI G T T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ Sbjct: 288 VVTIPAGSQETITSSLWTG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTF 342 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + Sbjct: 343 IQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-RQRMS 401 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D Sbjct: 402 QEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD--- 458 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 P+Y I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F Sbjct: 459 --------PYY--------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFF 502 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++YW SN+I+I QQ +I + Sbjct: 503 LWFPSGLVLYWLVSNLITIAQQQLIYR 529 >gi|307261914|ref|ZP_07543574.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868385|gb|EFN00202.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 533 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 126/398 (31%), Positives = 218/398 (54%), Gaps = 32/398 (8%) Query: 164 NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFI 221 + +L+ +T L Y + V N + + P G+I +++ + T G Sbjct: 153 DGVLYTKTFVLKRGSYDVAVNFNVKNQTAATVEVQPYGQIKYTLLESSGSLTMPTYTGGA 212 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 + + + + D+EK+++ + + W+ + Y+ S ++P+++ ++ + ++G Sbjct: 213 YSSAETNYKKYSFQDMEKANL-DINTKAGWVALLQHYFVSAWVPNQDAE-NTIYSRTNNG 270 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 A + TI P T T+ L+ G K+ E + ++ +D+GW +F Sbjct: 271 IATI--GYRGPVTTIAPNSEATITSQLWTGPKD-----QKEMEATAANLDLTVDYGWAWF 323 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+F L+++ ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+RE Sbjct: 324 IAKPLFALLTFIQSIVTNWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRE 383 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 +F Q + + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GW Sbjct: 384 RFGDD-RQRMSQEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGW 442 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL 520 I+DL+A D P+Y I P++M SMF+ KMSP P D Q ++ Sbjct: 443 IQDLSAQD-----------PYY--------ILPLLMGASMFLLQKMSPSPVTDPVQQKVM 483 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MPV+F FP+GL++YW SN+I+IVQQ +I + Sbjct: 484 TFMPVMFTVFFLWFPSGLVLYWLTSNIITIVQQWLIYR 521 >gi|328675234|gb|AEB27909.1| OxaI/YidC membrane insertion protein [Francisella cf. novicida 3523] Length = 551 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 125/339 (36%), Positives = 199/339 (58%), Gaps = 34/339 (10%) Query: 228 SLVEQKYSDIEKS----SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 S ++ + DI K+ ++ N + W+ Y+ S +IP + T+ +K L +G Sbjct: 239 SFRKESFKDISKTNGQPTVIN-SDGQGWVAFLQHYFVSAWIP-QSTNAKIYYKNL-NGDV 295 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 F+ +TI P +S ++ L+ G P I DLA P E +D+G F + Sbjct: 296 FEAGAFTG--VTIAPNQSENISSILYTG----PIIKANLVDLA-PNLEKTLDYGMLSFFS 348 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + +F +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E + Sbjct: 349 EIIFWVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETY 408 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI Sbjct: 409 KDDR-QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIH 467 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP Y + P++M LSMF+Q K+SP PAD QA ++ ++ Sbjct: 468 DLSMKDP------------YF-------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFL 508 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 PV+F F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 509 PVIFTFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|183597176|ref|ZP_02958669.1| hypothetical protein PROSTU_00419 [Providencia stuartii ATCC 25827] gi|188023490|gb|EDU61530.1| hypothetical protein PROSTU_00419 [Providencia stuartii ATCC 25827] Length = 549 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 155/573 (27%), Positives = 285/573 (49%), Gaps = 59/573 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S ++ AW++ ++ + K +QT +Q + + AV + Sbjct: 4 QRNLLLIALLFVSFLVWQAWES-------DKAAQDLKTVQTTQQTDMPSSDSQAVTSSGQ 56 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + ++ +K L IN +G D+ +L Y + S SP L + + Y Sbjct: 57 GKLIT------VKTDVLDLRINTRGGDIDEADLLAYPATLHSESPFRLLETTPDF--IYQ 108 Query: 122 AELDYVSTANNIELPNSNT---VWNLISGKILTPTTP----IKLVFKNANNILFERTISL 174 A+ + NSN V+++ S + + + F + N +++++T L Sbjct: 109 AQSGLIGQHGPDNPDNSNGQRPVYSVESSSFILADGQDELRVPMTFTDKNGVVYQKTYVL 168 Query: 175 DE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFIAVLGDKS 228 HY + + N + + + G++ + + T ++ F + A Sbjct: 169 KRGHYNVDVEYNIQNPTAQALNLAFFGQLKQTIQLPKERDTGSSNFALHTYRGAAYSSDE 228 Query: 229 LVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 +KYS DIE + N W+ + +Y+A+ ++P+ ++ +S F + G Sbjct: 229 SNYKKYSFSDIEDKKL-NVTTKGGWVAMLQQYFATAWVPA--SNENSTFYTIDLGQKEAI 285 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + +TI + T ++ L+ G P I ++A P ++ +D+GW +FI++P+ Sbjct: 286 IGYKSQPLTIAANGAGTYSSTLWVG----PEIQSEMAEVA-PHLDLTVDYGWLWFISQPL 340 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + + VGN+GIAI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 341 FKLLKFIHGFVGNWGIAIIIITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDD 400 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + + M+ LYK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF+GWI+DL+ Sbjct: 401 -KQRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFFGWIQDLS 459 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A D P+Y I P++M ++MF+ KMSP D Q I+ +MPV Sbjct: 460 AQD-----------PYY--------ILPVLMGVTMFVIQKMSPTAVTDPMQQKIMTYMPV 500 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 VF FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 VFTIFFLWFPSGLVLYYIVSNLVTIIQQQIIYR 533 >gi|217970730|ref|YP_002355964.1| hypothetical protein Tmz1t_2331 [Thauera sp. MZ1T] gi|217508057|gb|ACK55068.1| 60 kDa inner membrane insertion protein [Thauera sp. MZ1T] Length = 552 Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 151/507 (29%), Positives = 245/507 (48%), Gaps = 55/507 (10%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 PR ++ L ++ +G L L+ + + V LL T++ Y A+ + Sbjct: 74 PRAVVETDLLRAEVSAQGGDIVRLELKQHKASGEAGGNFV-LLDDGTTRHQYAAQSGLIG 132 Query: 129 TANNIELPNSNTVWNLISGKILTP----TTPIKLVFKNANNILFERTISLDE-HYLFKIV 183 LP T++ L +G++ ++L N + + + YL + Sbjct: 133 EG----LPTHKTLFQLPAGELRLKDGENGVELRLQAPEQNGVQVTKVMRFARGSYLIDVS 188 Query: 184 DTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKS 240 + N S + ++ R P FGV G + +++DI Sbjct: 189 YEIRNGSGQALAPHAYFQLTRDGNPAEQVEAFGVTTFTGPAFYTDANKFQKVQFADITDG 248 Query: 241 SISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + F ++ + W+ + Y+ ++P Q +Y + A FSA ILP Sbjct: 249 D-AKFPKTAADGWVAMVQHYFVGAWLPKA----GEQREYFA--RALGNNLFSAG--VILP 299 Query: 299 GKSITT------TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 SI T + L+AG +E + P ++++D+GW IA P+F ++S+ Sbjct: 300 VASIATGAEGAVSTRLYAGPQEQDKLEGIA-----PGLDLVVDYGWLTVIAAPLFWVLSW 354 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F+NL GN+G AI+L TV +K +FFPL+ Y S A M+ + P++ ++E + + +Q Sbjct: 355 FHNLTGNWGWAIILVTVAIKAIFFPLSAASYKSMAKMRVLGPRLQRMKEMYGNDKAK-MQ 413 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+ LY+T INPL GC PIL+QIPVF A+Y V+ S+EMRHAP+ GWI+DL+A DP Sbjct: 414 QEMMNLYRTEKINPLGGCLPILVQIPVFIALYWVLLGSVEMRHAPWLGWIQDLSAKDPYF 473 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I PIIM +SM +QMK++P P D QA ++ MP++F F Sbjct: 474 IL-------------------PIIMGVSMLVQMKLNPTPPDPIQAKVMMAMPIIFTFMFL 514 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKM 559 FP+GL++YW +N +SI QQ I +M Sbjct: 515 WFPSGLVLYWVVNNCLSIAQQWQITRM 541 >gi|119947213|ref|YP_944893.1| 60 kDa inner membrane insertion protein [Psychromonas ingrahamii 37] gi|166977402|sp|A1T0M9|OXAA_PSYIN RecName: Full=Inner membrane protein oxaA gi|119865817|gb|ABM05294.1| protein translocase subunit yidC [Psychromonas ingrahamii 37] Length = 566 Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 166/527 (31%), Positives = 252/527 (47%), Gaps = 54/527 (10%) Query: 47 NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + V NS D + L S V + N L +I+L G +L + + S++P Sbjct: 59 DGVPNSPQQSSTDATSTELPASQSVTIANDELRLTISLVGGDIIKADLLQHDATLDSDTP 118 Query: 107 IVTLLSPSNTKNAYFAELDYVST---ANNIELP---NSNTVWNLISGKILTPTTPIKLVF 160 L S Y A+ + AN P ++T L G+ T L F Sbjct: 119 YRLL--DSGNGFTYIAQSGLIGQGPDANKNGRPLYDTTDTESVLADGQAEVSTM---LHF 173 Query: 161 KNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 +A+ +F +T +L Y+ + + N + + ++ +T ++ G Sbjct: 174 VDADGNIFIKTFTLKRGEYVTNVAYQIENKTDSPLNVQLYAQLR----ETLSDDSGSMVM 229 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHES-------NSWLGISDKYWASVFIPSKETSFH 272 + G S E +Y EK S S+ + W+ + Y+ S +IPS Sbjct: 230 PVYRGGAFSTTETRY---EKYSFSDMQDGPLQKTTEGGWVAMLQHYFVSAWIPSPTDQNV 286 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + D A F A TI P L+ G P I E L ++ Sbjct: 287 LYSNIIQDKEAAI--GFKAPSKTIAPQSVAELETNLWVG----PKIQE-EMALVAKNLDL 339 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +D+GW +FIA+P+F L+ +F +VGN+G+AI+L T VK +PL K QY S A M+ + Sbjct: 340 TVDYGWLWFIAQPLFKLLLFFQGIVGNWGVAIILITFTVKGALYPLTKAQYTSMAKMRLL 399 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPKI ELRE+F + Q + KAM++LYK +NPL GC+PILLQ+P+F A+Y + S+E Sbjct: 400 QPKIKELREQFGED-RQKVSKAMMELYKKEKVNPLGGCFPILLQMPIFIALYWSLMESVE 458 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +RHAPF WI+DL+ D P+Y I PI+M +SMF KMSP Sbjct: 459 LRHAPFMLWIQDLSVQD-----------PYY--------ILPILMGVSMFFIQKMSPTTV 499 Query: 513 -DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q ++ +MPV+F F FPAGL++YW SNV++++QQ +I + Sbjct: 500 QDPMQQKVMQFMPVIFTFFFLWFPAGLVLYWLMSNVVTLIQQTLIYR 546 >gi|242241427|ref|YP_002989608.1| inner membrane protein translocase component YidC [Dickeya dadantii Ech703] gi|242133484|gb|ACS87786.1| 60 kDa inner membrane insertion protein [Dickeya dadantii Ech703] Length = 543 Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 146/503 (29%), Positives = 246/503 (48%), Gaps = 47/503 (9%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 + +K L +IN +G ++ +L Y D+ S P L T A+ + T Sbjct: 60 ITVKTDVLSLTINTRGGDIEEADLLAYPADLGSKQPFKLL----ETTQAFTYQAQSGLTG 115 Query: 131 NNIELPNSNTVWNLISG-----KILTPTTPIK--LVFKNANNILFERTISLDE-HYLFKI 182 N +N L S ++ I+ L + +AN I + +T +L Y + Sbjct: 116 KNGPDNPANGSRPLFSATQDHFELADGQNDIRIPLTYTDANGISYTKTFALKRGEYALNV 175 Query: 183 VDTVTNNSIDQIRFSPRGRIMR------HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 V N S + + G++ + H+ T +N F + A L +KYS Sbjct: 176 EYGVNNTSAQPLELTLFGQLKQSIDLPSHR-DTGSNNFALHTYRGAALSSSDDKYRKYSF 234 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + N W+ + +Y+AS +IP+ + + F + G+ F A + + Sbjct: 235 SDMKENLNVATQGGWVAMLQQYFASAWIPAAGGA--NTFYTSNLGNGLAAIGFKATPVIV 292 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG T L+ G P I +A P ++ +D+GW +FI++P+F L+ + ++ Sbjct: 293 QPGSQQTLGATLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQPLFKLLKFLHSF 347 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + + M+ Sbjct: 348 IGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-KQRMSQEMM 406 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 407 ALYKAEKVNPLGGCFPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD------- 459 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 P+Y + PI+M L+MF KMSP D Q I+ +MPV+F FP Sbjct: 460 ----PYY--------VLPILMGLTMFFIQKMSPTTVTDPMQQKIMTYMPVMFTVFFLWFP 507 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 +GL++Y+ SN+++IVQQ +I + Sbjct: 508 SGLVLYYIVSNLVTIVQQQLIYR 530 >gi|254282101|ref|ZP_04957069.1| inner membrane protein, 60 kDa [gamma proteobacterium NOR51-B] gi|219678304|gb|EED34653.1| inner membrane protein, 60 kDa [gamma proteobacterium NOR51-B] Length = 572 Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 145/500 (29%), Positives = 249/500 (49%), Gaps = 45/500 (9%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAELDYVST 129 + +K +L I+L G ++ L + + N P +L N + Y A+ V + Sbjct: 97 IAVKTETLELVIDLNGGDIIEVALPRFPEQIDDPNQPF--MLLEQNDRRTYIAQSGLVGS 154 Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILFERTISLD-EHYLFKIVDT 185 + I+ P + S TP P+ + N++ + + +LD E Y+ + + Sbjct: 155 -DGIDHPQRAHYVSAQSEYTATPGQPLSIELAWAGNSSELAITKRFTLDPESYVVDVEYS 213 Query: 186 VTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLG--DKSLVEQKYSDIEKS 240 VTNN + + P ++ R P T+ G++ A L D + + DI Sbjct: 214 VTNNRGSRWQAVPFAQLKRDNTPPPNADTSGLGMKPFLGAALTQPDDRFTKFDFGDIADE 273 Query: 241 SISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 F ++ W+ + Y+ S +I + S + + + G F++ + + Sbjct: 274 P---FRKTLPGGWIALMQHYFVSAWIANPNQSHNYSTRQTTSGFNI--VGFTSPALAVDS 328 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G + + L+ G K+ Y+ ++ +D+GW ++IA+P+F L++ ++VG Sbjct: 329 GNTGSAGYRLYVGPKD-----QYQLAELSDHLDLTVDYGWLWWIAQPLFWLLTKIQSVVG 383 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+L TV VK FF L+ Y S A M+ +QPK+ ++RE++ + Q M++L Sbjct: 384 NWGVAIILLTVLVKGAFFKLSATSYRSMARMRKLQPKMVDIREQYADDKSKQSQ-MMMEL 442 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y+ +NP+ GC PIL+Q+PVF A+Y V+ S+E+RHAPF WIKDL+ DP + Sbjct: 443 YRKEKVNPMGGCLPILIQMPVFIALYWVLMESVELRHAPFVLWIKDLSVMDPYFVL---- 498 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 P++M SMF K++PPP D QA I+ W+PV+F F FPAGL Sbjct: 499 ---------------PLMMGASMFFMQKLNPPPPDPMQAKIMQWLPVIFTFFFLWFPAGL 543 Query: 539 IIYWSWSNVISIVQQAVIMK 558 ++YW +N++S+ QQ VI + Sbjct: 544 VLYWVVNNLLSMTQQYVITR 563 >gi|92115431|ref|YP_575359.1| putative inner membrane protein translocase component YidC [Chromohalobacter salexigens DSM 3043] gi|91798521|gb|ABE60660.1| protein translocase subunit yidC [Chromohalobacter salexigens DSM 3043] Length = 575 Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 126/352 (35%), Positives = 192/352 (54%), Gaps = 37/352 (10%) Query: 215 GVQEGFIAVLGDK-SLVEQKYS-----DIEKSSISNFHESNSWLGISDKYWASVFIP--S 266 GV G + LG S E Y DI +N W+ + Y+ S ++P + Sbjct: 237 GVSMGMKSFLGATFSTQESNYEKISFEDIRDGEFNNVESEGGWVAMIQHYFTSAWVPEQN 296 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 +E +++ D R A F+ I PG++ L+ G P I + +A Sbjct: 297 QENLYYANI----DSRDRNVAAFAGPSQQIAPGETTRMAATLYMG----PKIQDRLEAIA 348 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P E+ +D+GW +FIA P+F L++ ++L+GN+G +I+L TV VK++ FPL+ K Y S Sbjct: 349 -PHLELTVDFGWLWFIANPLFWLLAKIHSLIGNWGWSIVLLTVIVKIVLFPLSAKAYKSM 407 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ + P++ ++E++ Q + + M++ Y+ INPL GC PI++Q+PVF A+Y + Sbjct: 408 AKMRKMGPEMKRIKEQYGDD-RQKMSQEMMKFYQKEKINPLGGCLPIVVQMPVFIALYWM 466 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + S+E+RHAPF WI DL+A DP I PIIM SMF+Q Sbjct: 467 LLESVELRHAPFILWINDLSAQDPYFIL-------------------PIIMGASMFVQQL 507 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++P P D QA I+ +PVVF F FPAGL+IYW +NVISI+QQ +I + Sbjct: 508 LNPTPPDPMQAKIMKMLPVVFTFFFLWFPAGLVIYWICNNVISILQQWIITR 559 >gi|163859332|ref|YP_001633630.1| putative inner membrane protein translocase component YidC [Bordetella petrii DSM 12804] gi|254772752|sp|A9IJB7|OXAA_BORPD RecName: Full=Inner membrane protein oxaA gi|163263060|emb|CAP45363.1| yidC [Bordetella petrii] Length = 563 Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 150/486 (30%), Positives = 246/486 (50%), Gaps = 40/486 (8%) Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNAYFAELDYVSTANNIELPNSN 139 + + GAQ L Y N P V L SP T Y + V N PN Sbjct: 98 TFDTTGAQLIRAELLKYPTSGQPNKPTVLLDRSPELT---YVVQSGLVGAPNGQSFPNHQ 154 Query: 140 TVWNLISGKILTPTTPIKLVFK-NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFS 197 T + L+S +++VF+ ++ + +T +L Y + ++ N S + S Sbjct: 155 TPFRLVSTDHELKGDSLQVVFEADSGGLKVTKTYTLHRGRYDIDVQHSLANTSDAPLAPS 214 Query: 198 PRGRIMRHKPQTA-TNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHES-NSWLGI 254 ++ R A T++F +AV ++ ++ +SDI K S ++ N WL + Sbjct: 215 LYLQLERDGNDPADTSSFYHTFTGVAVYSEQDKFQKITFSDIAKGKGSYIKQADNGWLAV 274 Query: 255 SDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE 314 Y+A+ ++P + ++ L Y A+ T+ PG + + L+ G ++ Sbjct: 275 VQHYFATAWVPPQGKQRTNEL--LQVQPNLYAARSIEAVGTVQPGATAQVDSRLWVGPQD 332 Query: 315 FPTIHHYEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 +K +A P E+++D+GW IAKP+F L+++ ++L+GN+G AI+ TV +K Sbjct: 333 -------QKAMAAVAPGLELVVDYGWLTIIAKPLFSLLTWLHSLLGNWGWAIVALTVIIK 385 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 +FFPLA Y S A MK + P++ L+EK+ Q L +AM+++Y+T INPL GC P Sbjct: 386 AVFFPLAAASYRSMARMKQVAPRLQALKEKYGDD-RQKLNQAMMEMYRTEKINPLGGCLP 444 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +++QIPVF A+Y V+ S+EMR AP+ W+ DL+ DP I Sbjct: 445 MVVQIPVFIALYWVLLASVEMRGAPWILWVHDLSVRDPYFIL------------------ 486 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P +M +MF+Q+K++P P D QA ++ MP+VF + FPAGL++YW +N +SI Q Sbjct: 487 -PAVMMATMFLQIKLNPTPPDPIQAKVMMIMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQ 545 Query: 553 QAVIMK 558 Q I + Sbjct: 546 QWTITR 551 >gi|73543142|ref|YP_297662.1| putative inner membrane protein translocase component YidC [Ralstonia eutropha JMP134] gi|123623711|sp|Q46VL6|OXAA_RALEJ RecName: Full=Inner membrane protein oxaA gi|72120555|gb|AAZ62818.1| protein translocase subunit yidC [Ralstonia eutropha JMP134] Length = 555 Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 156/489 (31%), Positives = 237/489 (48%), Gaps = 44/489 (8%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 I+ G L L H P+V L +T Y A + +LPN Sbjct: 94 AEIDTAGGILSRLELLNEH--EKDGKPVV--LFERDTTRTYMARSGLIGG----DLPNHT 145 Query: 140 TVWNLISG-KILTPTTPIKLVF-KNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRF 196 TV+ G + L +++ + N + F +T + Y+ VTN+ + Sbjct: 146 TVFTATPGPRTLDGADKLEVTLTADKNGVKFVKTYVFHKGSYVVDARFAVTNDGTAPVSP 205 Query: 197 SPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHESNS-WLGI 254 + + R + + F A+ D + + DI K S + S W+ + Sbjct: 206 TLYMELARDGSKVEQSQFYSTFTGPAIYTDADKYHKITFDDIAKGKASTPAATTSGWVAM 265 Query: 255 SDKYWASVFIP--SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 Y+AS +IP KE SF+ Q Y+ I PG ++TT LFAG Sbjct: 266 VQHYFASAWIPQAGKEHSFYVQ----QIDPNLYRVGIQQPLGQIAPGATVTTDARLFAGP 321 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 +E + P E++ D+GW +AKP+F L+ + + N+G +I+ TV +K Sbjct: 322 QEERMLEKI-----TPGLELVKDYGWLTILAKPLFWLLEKLHGFLNNWGWSIIALTVLIK 376 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 L+FFPL+ Y S MK++QP++ +RE+ K P Q + M+ LYKT +NPL GC P Sbjct: 377 LVFFPLSAASYKSMGKMKDLQPRMTSIRERHKGDP-QKMNAEMMALYKTEKVNPLGGCLP 435 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 I++QIPVF A+Y V+ S+EMR AP+ GWI DL+ D PFY I Sbjct: 436 IVIQIPVFIALYWVLLSSVEMRGAPWLGWIHDLSVPD-----------PFY--------I 476 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 PI+M++SMF+Q +++P P D QA ++ MP+VF F FPAGL++YW +N++SI Q Sbjct: 477 LPIVMAVSMFVQTRLNPTPPDPVQAKVMMIMPLVFSFMFFFFPAGLVLYWVVNNILSIAQ 536 Query: 553 QAVIMKMHG 561 Q I +M G Sbjct: 537 QWQINRMLG 545 >gi|303247340|ref|ZP_07333613.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio fructosovorans JJ] gi|302491254|gb|EFL51143.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio fructosovorans JJ] Length = 537 Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 150/497 (30%), Positives = 241/497 (48%), Gaps = 55/497 (11%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP-SNTKNAYFAELDYVST 129 + + P N G +L+ Y ++++SP+V L++ ++ K L+ T Sbjct: 73 LTVDTPLYTAVFNSTGGLLSRFSLKQYRQTIAADSPLVDLINEKAHAKAPLGLILNGTPT 132 Query: 130 ANNIELPNSNTVWNLISGKIL---TPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTV 186 N+E W++ G + + T + V + + I+ +YL ++ Sbjct: 133 WQNVE-------WSVQGGDVTLDASGTASVTFVGRMGDTIIKRVLTFSGSNYLIDEKLSL 185 Query: 187 TNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 +N + R + + +++ + A D S +E +S+ + + Sbjct: 186 SNTGANPARERLSMTVAVDRLSAEGDSYNPTQ---AAFYDTSGLELFHSEKKLAEGIADE 242 Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTN 306 + W I Y+ IP T + K + DG R EI + +T + Sbjct: 243 KPVEWGAIMSNYFLVGVIPDT-TDLRGKAK-IEDGLFRLAVDKDGLEIPAGGRQDLTISY 300 Query: 307 FLFAGAKEFPTI--HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 +L A +F + HH ID+GWF FIAKP+ L+ +FYN VGN+G+AI Sbjct: 301 YLGPKAPKFLAMAPHH---------LSAAIDYGWFDFIAKPLVKLLHFFYNYVGNYGVAI 351 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 +L TV +K +F+PL+ K Y S MK +QP + +LREK+K Q + + M+QLYKT+ + Sbjct: 352 ILLTVLIKAIFWPLSHKSYKSMEQMKKLQPLLSQLREKYKDD-RQKMNEEMMQLYKTYKV 410 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIKDLAAADPTNIFTL 476 NP GC P+++QIPVFF +Y+ + S+E+RHA F W+ DL+A D Sbjct: 411 NPAGGCLPMVVQIPVFFGLYQALLHSIELRHAAFITYFPFTHHIWLADLSAKD------- 463 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 P+Y I P+IM +MF+Q KM+P P D QA I+ MPV+F F +FP+ Sbjct: 464 ----PYY--------ITPLIMGATMFLQQKMTPAPGDPTQAKIMLLMPVIFTFMFLNFPS 511 Query: 537 GLIIYWSWSNVISIVQQ 553 GL++YW +NVISI QQ Sbjct: 512 GLVVYWLVNNVISIAQQ 528 >gi|254372056|ref|ZP_04987549.1| hypothetical protein FTCG_01195 [Francisella tularensis subsp. novicida GA99-3549] gi|151569787|gb|EDN35441.1| hypothetical protein FTCG_01195 [Francisella novicida GA99-3549] gi|328676141|gb|AEB27011.1| OxaI/YidC membrane insertion protein [Francisella cf. novicida Fx1] Length = 551 Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 125/339 (36%), Positives = 199/339 (58%), Gaps = 34/339 (10%) Query: 228 SLVEQKYSDIEKS----SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 S ++ + DI K+ ++ N + W+ Y+ S +IP + T+ +K L +G+ Sbjct: 239 SFRKESFKDISKTNGQPTVIN-SDGQGWVAFLQHYFVSAWIP-QSTNAKIYYKNL-NGNV 295 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 F+ TI P +S ++ L+ G P I DLA P E +D+G F + Sbjct: 296 FEAGAFTG--ATIAPNQSENISSILYTG----PIIKANLVDLA-PNLEKTLDYGMLSFFS 348 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + +F +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E + Sbjct: 349 EIIFWVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETY 408 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI Sbjct: 409 KDDR-QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIH 467 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP Y + P++M LSMF+Q K+SP PAD QA ++ ++ Sbjct: 468 DLSMKDP------------YF-------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFL 508 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 PV+F F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 509 PVIFTFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|71909810|ref|YP_287397.1| protein translocase subunit yidC [Dechloromonas aromatica RCB] gi|123746663|sp|Q477Q4|OXAA_DECAR RecName: Full=Inner membrane protein oxaA gi|71849431|gb|AAZ48927.1| protein translocase subunit yidC [Dechloromonas aromatica RCB] Length = 547 Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 165/556 (29%), Positives = 262/556 (47%), Gaps = 58/556 (10%) Query: 21 WQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78 W+N+ Y P+ + P+ + AA A +S + + L Sbjct: 20 WENWQKYNQPKPADAVAAAPVSGAAPTPSAALQAKAAPGTPPVATPVSTAETFSITTDLL 79 Query: 79 IGSINLKGAQFDDLNLRGY--HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELP 136 +I+ +G L L Y H D+ N + + K+ Y A+ + LP Sbjct: 80 KATISAQGGDLVSLELLNYKEHDDIQKNFDLF------DAKHQYLAQAGLIGEG----LP 129 Query: 137 NSNTVWNLISG--KILTPTTPIKLVFKNA--NNILFERTISLDE-HYLFKIVDTVTNNSI 191 T + + G K+ T +K+ ++A N I + ++ YL I V N S Sbjct: 130 THRTTFKHVGGATKLADGTDELKVRLESADQNGIKVAKILTFKRGSYLIDIAWEVANGSD 189 Query: 192 DQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN----F 245 I ++ R P T G AV D KY + I++ F Sbjct: 190 KAIAPHAYYQLQRDDLAPAGETKMVSTFTG-PAVFTDAD----KYQKVTFEHIADNKAKF 244 Query: 246 HES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 ++ N WL + Y+ S ++P +T + + +G +QA I PG Sbjct: 245 TKTADNGWLAMVQHYFVSAWVPKDKTQREFYMRKV-EGSNVFQAGVIVPVAEIAPGAKGE 303 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+AG P + K +A P ++++D+GW +A P+F + + LVGN+G A Sbjct: 304 ASVSLYAG----PQMQSALKQVA-PGLDLVVDYGWLTVVAAPIFWALEAIHKLVGNWGWA 358 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ +K +FFPL+ Y S A MK + P++ +L+E+F Q L + M++LY+T Sbjct: 359 IVVLTIMIKAVFFPLSAASYKSMAKMKMLTPRLAQLKERFGDDK-QRLNQEMMKLYQTEK 417 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC PIL+QIPVF A+Y V+ ++EMR AP+ WIKDLA+ADP I Sbjct: 418 VNPLGGCLPILVQIPVFIALYWVLLGAVEMRGAPWILWIKDLASADPYYIL--------- 468 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 P+IM +SMF+Q K++P P D QA ++ MP++F F FPAGL++YW Sbjct: 469 ----------PVIMMVSMFVQTKLNPTPPDPIQAKVMMMMPLIFGFMFFWFPAGLVLYWV 518 Query: 544 WSNVISIVQQAVIMKM 559 +NV+SI QQ I ++ Sbjct: 519 VNNVLSIAQQWQITRL 534 >gi|322515695|ref|ZP_08068668.1| YidC/Oxa1 family membrane protein insertase [Actinobacillus ureae ATCC 25976] gi|322118240|gb|EFX90532.1| YidC/Oxa1 family membrane protein insertase [Actinobacillus ureae ATCC 25976] Length = 542 Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 128/399 (32%), Positives = 216/399 (54%), Gaps = 34/399 (8%) Query: 164 NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 + +L+ +T L Y + V N S I P G+ ++H ++ + + Sbjct: 162 DGVLYTKTFVLKRGSYDVAVNFNVKNQSAQAIEVQPYGQ-LKHTLVESSGSLTMPTYTGG 220 Query: 223 VLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 +KYS ++ K ++ N W+ + Y+ S ++P+++ +S + ++ Sbjct: 221 AYSSSETNYKKYSFDEMAKENL-NIGTKAGWVAVLQHYFVSAWVPNQDAQ-NSLYSRTNN 278 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G A + E+ P T T+ L+ G K+ E + ++ +D+GW + Sbjct: 279 GIATIGYRGPVTEVA--PNSEATITSQLWTGPKD-----QKEMEATAATLDLTVDYGWAW 331 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIAKP+F L+++ ++V N+G+AI+ T+ VK++ +PL K QY S A M+ +QPKI E+R Sbjct: 332 FIAKPLFALLTFIQSIVTNWGLAIIGVTLVVKMILYPLTKAQYTSMAKMRMLQPKIQEMR 391 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+G Sbjct: 392 ERFGDD-RQRMSQEMMKLYKDEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFG 450 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI+DL+A D P+Y I P++M SMF+ KMSP P AD Q + Sbjct: 451 WIQDLSAQD-----------PYY--------ILPLLMGGSMFLLQKMSPTPVADPVQKKV 491 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +MPV+F FP+GL++YW SN+I+I QQ +I + Sbjct: 492 MTFMPVLFTVFFLWFPSGLVLYWLTSNLITIAQQWLIYR 530 >gi|209519687|ref|ZP_03268476.1| 60 kDa inner membrane insertion protein [Burkholderia sp. H160] gi|209499904|gb|EDZ99970.1| 60 kDa inner membrane insertion protein [Burkholderia sp. H160] Length = 552 Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 156/502 (31%), Positives = 250/502 (49%), Gaps = 63/502 (12%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L+L D ++TL +N + Y A + + PN N Sbjct: 89 GEIDTRGGTVSRLSLVK-QGDGKQPDLVITLFDRTN-NHTYLARTGLLGG----DFPNHN 142 Query: 140 TVWNLISGKILTPTTPIKLV-FKNANNILFE----------RTISLDE-HYLFKIVDTVT 187 V+ L+ P P +LV +N+ + FE +T + Y+ + V Sbjct: 143 DVFTLM------PNQPTQLVDGQNSFQMSFESPEKGGLKVIKTYTFTRGSYVIGVETKVQ 196 Query: 188 NNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA---VLGDKSLVEQKYSDIEKSSISN 244 N + ++R T F FI + + +SD++K+ + Sbjct: 197 NVGTTAVTPQVYMELVRDDQPVETPRF--SHTFIGPAVYTNEHHFQKMTFSDLDKNK-QD 253 Query: 245 FHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 F S + W+ + Y+AS +IP + +F + Y+ TI PG+++ Sbjct: 254 FATSANDGWVAMVQHYFASAWIP--QEGVKREFYAEKIDPSLYRVGMKQALPTIQPGQTV 311 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + + LFAG +E EK LA P +++ D+GW IAKP+F L+S + LVGN+ Sbjct: 312 SVSARLFAGPEE-------EKMLAGIAPGLDLVKDYGWVTIIAKPLFWLLSKIHGLVGNW 364 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK PQ + A+++LYK Sbjct: 365 GWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGD-PQKMNAALMELYK 423 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 T +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI+DL+ DP I Sbjct: 424 TEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIQDLSQQDPYFIL------ 477 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 PI+M++SMF+Q +++P P D QA ++ +MP+ F FPAGL++ Sbjct: 478 -------------PILMAVSMFLQTRLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVL 524 Query: 541 YWSWSNVISIVQQAVIMKMHGA 562 Y+ +NV+SI QQ I +M G+ Sbjct: 525 YYVVNNVLSIAQQYYITRMMGS 546 >gi|206890197|ref|YP_002249042.1| inner membrane protein OxaA [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742135|gb|ACI21192.1| inner membrane protein OxaA [Thermodesulfovibrio yellowstonii DSM 11347] Length = 513 Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 122/347 (35%), Positives = 191/347 (55%), Gaps = 59/347 (17%) Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 +L + +E S I++++ + E W+ DKY+ S +P + Sbjct: 210 VILKEADRIELNPSKIKETN--TYKEGVKWIAQEDKYFFSAIVPVTK------------- 254 Query: 282 HARYQAKFSANEITILP--GKSITTTNF--------LFAGAKEFPTIHHYEKDLAIPRFE 331 AN+ +LP G ++T F +FA KE+ + + L E Sbjct: 255 ---------ANQFVVLPYNGDALTGVEFNDGINSYRVFAAPKEYDYLKKFNVGL-----E 300 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 ++D+G+F IA+P+F + Y+L+GN+GIAI++ T+ V++ F P+ + S + Sbjct: 301 HIVDFGFFSIIARPLFWFLKLLYSLIGNYGIAIIILTILVRIPFIPIVNRGQKSMQKLSE 360 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QPK+ +L+E++K P Q LQK M++LYK + INP++GC P+LLQIPVFFA+YK+++I++ Sbjct: 361 LQPKLMQLKEQYKNDP-QRLQKEMMELYKKYKINPMSGCLPMLLQIPVFFALYKILTIAI 419 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+R APF WI DL+A D P+Y + PIIM +M IQ KM+P Sbjct: 420 ELRQAPFMFWIHDLSAKD-----------PYY--------VLPIIMGATMLIQQKMTPST 460 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 AD Q I+ +PVVF F SFP+GL++YW +N+ I QQ I K Sbjct: 461 ADPTQQKIMLLLPVVFTFLFLSFPSGLVLYWLINNLFGIAQQFYINK 507 >gi|167626982|ref|YP_001677482.1| hypothetical protein Fphi_0760 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189036351|sp|B0TW73|OXAA_FRAP2 RecName: Full=Inner membrane protein oxaA gi|167596983|gb|ABZ86981.1| conserved membrane protein of unknown function [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 551 Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 124/342 (36%), Positives = 201/342 (58%), Gaps = 34/342 (9%) Query: 225 GDKSLVEQKYSDIEKS----SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + S ++ + DI K+ ++ N + W+ Y+ S +IP S S+ Y + Sbjct: 236 ANDSFRKESFKDISKTNGQPTVIN-SQGLGWVAFIQHYFVSAWIPQ---SNDSKIYYKNL 291 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 + ++A + I+I P +S + + L++G P I DLA P E +D+G Sbjct: 292 NNDVFEAG-AYTGISIAPNQSESIDSVLYSG----PIIKANLVDLA-PNLEKTLDYGMLS 345 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F ++ +F +M+ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP++ L+ Sbjct: 346 FFSEIIFWVMNQIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRVKRLQ 405 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E +K QVL K M+++YK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF Sbjct: 406 ETYKDDR-QVLGKKMMEMYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIF 464 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP + PI+M +SMF+Q K+SP PAD QA I+ Sbjct: 465 WIHDLSMKDPYFVL-------------------PILMGISMFLQQKLSPAPADPMQAKIM 505 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++PV+F F +SFP+GL++YW +NVISI+QQ +I + + A Sbjct: 506 MFLPVIFTFLFASFPSGLVLYWLTNNVISILQQWIITRHYQA 547 >gi|118496688|ref|YP_897738.1| membrane protein of unknown function [Francisella tularensis subsp. novicida U112] gi|194323997|ref|ZP_03057772.1| 60Kd inner membrane protein [Francisella tularensis subsp. novicida FTE] gi|166975866|sp|A0Q419|OXAA_FRATN RecName: Full=Inner membrane protein oxaA gi|118422594|gb|ABK88984.1| conserved membrane protein of unknown function [Francisella novicida U112] gi|194321894|gb|EDX19377.1| 60Kd inner membrane protein [Francisella tularensis subsp. novicida FTE] Length = 551 Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 125/339 (36%), Positives = 198/339 (58%), Gaps = 34/339 (10%) Query: 228 SLVEQKYSDIEKS----SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 S ++ + DI K+ ++ N + W+ Y+ S +IP + T+ +K L +G Sbjct: 239 SFRKESFKDISKTNGQPTVIN-SDGQGWVAFLQHYFVSAWIP-QSTNAKIYYKNL-NGDV 295 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 F+ TI P +S ++ L+ G P I DLA P E +D+G F + Sbjct: 296 FEAGAFTG--ATIAPNQSENISSILYTG----PIIKANLVDLA-PNLEKTLDYGMLSFFS 348 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + +F +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E + Sbjct: 349 EIIFWVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETY 408 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI Sbjct: 409 KDDR-QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIH 467 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP Y + P++M LSMF+Q K+SP PAD QA ++ ++ Sbjct: 468 DLSMKDP------------YF-------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFL 508 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 PV+F F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 509 PVIFTFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|26986751|ref|NP_742176.1| putative inner membrane protein translocase component YidC [Pseudomonas putida KT2440] gi|60392875|sp|P0A140|OXAA_PSEPK RecName: Full=Inner membrane protein oxaA gi|60392876|sp|P0A141|OXAA_PSEPU RecName: Full=Inner membrane protein oxaA gi|24981341|gb|AAN65640.1|AE016190_6 inner membrane protein, 60 kDa [Pseudomonas putida KT2440] gi|45709|emb|CAA44417.1| unnamed protein product [Pseudomonas putida] gi|313496415|gb|ADR57781.1| OxaA [Pseudomonas putida BIRD-1] Length = 560 Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 132/379 (34%), Positives = 209/379 (55%), Gaps = 31/379 (8%) Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEK 239 ++D + + + F+ R P ++T T G A L S +K S DI+K Sbjct: 200 LIDNQSGQAWNGNMFAQLKRDASGDPSSSTAT-GTATYLGAALWTASEPYKKVSMKDIDK 258 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 S+ + S W+ Y+ + +IP+K + Q + D Y ++ I++ G Sbjct: 259 GSLKE-NVSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--KDSQGNYIIGYTGPVISVPAG 315 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + T+ L+AG P I K+L+ P E+ +D+G+ +FIA+P+F L+ + ++L+GN Sbjct: 316 GKVETSALLYAG----PKIQSKLKELS-PGLELTVDYGFLWFIAQPIFWLLQHIHSLLGN 370 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+F Q + +AM++LY Sbjct: 371 WGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALKERFGDD-RQKMSQAMMELY 429 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ WI DL+ D Sbjct: 430 KKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWILWITDLSIKD---------- 479 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 PF+ I PIIM +MFIQ +++P P D QA ++ MP++F F FPAGL+ Sbjct: 480 -PFF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFPAGLV 530 Query: 540 IYWSWSNVISIVQQAVIMK 558 +YW +N +SI QQ I + Sbjct: 531 LYWVVNNCLSISQQWYITR 549 >gi|254368609|ref|ZP_04984625.1| inner-membrane protein [Francisella tularensis subsp. holarctica FSC022] gi|157121512|gb|EDO65703.1| inner-membrane protein [Francisella tularensis subsp. holarctica FSC022] Length = 551 Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 125/339 (36%), Positives = 198/339 (58%), Gaps = 34/339 (10%) Query: 228 SLVEQKYSDIEKS----SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 S ++ + DI K+ ++ N + W+ Y+ S +IP + T+ +K L +G Sbjct: 239 SFRKESFKDISKTNGQPTVIN-SDGQGWVAFLQHYFVSAWIP-QSTNAKIYYKNL-NGDV 295 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 F+ TI P +S ++ L+ G P I DLA P E +D+G F + Sbjct: 296 FEAGAFTG--ATIAPNQSENISSILYTG----PIIKANLVDLA-PNLEKTLDYGMLSFFS 348 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + +F +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E + Sbjct: 349 EIIFWVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETY 408 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI Sbjct: 409 KDDR-QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIH 467 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP Y + P++M LSMF+Q K+SP PAD QA ++ ++ Sbjct: 468 DLSMKDP------------YF-------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFL 508 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 PV+F F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 509 PVIFTFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|187932218|ref|YP_001892203.1| hypothetical membrane protein [Francisella tularensis subsp. mediasiatica FSC147] gi|254772786|sp|B2SE60|OXAA_FRATM RecName: Full=Inner membrane protein oxaA gi|187713127|gb|ACD31424.1| hypothetical membrane protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 551 Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 125/339 (36%), Positives = 198/339 (58%), Gaps = 34/339 (10%) Query: 228 SLVEQKYSDIEKS----SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 S ++ + DI K+ ++ N + W+ Y+ S +IP + T+ +K L +G Sbjct: 239 SFRKESFKDISKTNGQPTVIN-SDGQGWVAFLQHYFVSAWIP-QSTNAKIYYKNL-NGDV 295 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 F+ TI P +S ++ L+ G P I DLA P E +D+G F + Sbjct: 296 FEAGAFTG--ATIAPNQSENISSILYTG----PIIKANLVDLA-PNLEKTLDYGMLSFFS 348 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + +F +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E + Sbjct: 349 EIIFWVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETY 408 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI Sbjct: 409 KDDR-QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIH 467 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP Y + P++M LSMF+Q K+SP PAD QA ++ ++ Sbjct: 468 DLSMKDP------------YF-------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFL 508 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 PV+F F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 509 PVIFTFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|56707390|ref|YP_169286.1| inner-membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110669861|ref|YP_666418.1| inner-membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134302668|ref|YP_001122637.1| inner-membrane protein of unknown function [Francisella tularensis subsp. tularensis WY96-3418] gi|224456465|ref|ZP_03664938.1| hypothetical protein FtultM_01268 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370910|ref|ZP_04986915.1| inner-membrane protein [Francisella tularensis subsp. tularensis FSC033] gi|254874228|ref|ZP_05246938.1| inner-membrane protein [Francisella tularensis subsp. tularensis MA00-2987] gi|81677123|sp|Q5NI56|OXAA_FRATT RecName: Full=Inner membrane protein oxaA gi|122971083|sp|Q14JK8|OXAA_FRAT1 RecName: Full=Inner membrane protein oxaA gi|166975867|sp|A4J015|OXAA_FRATW RecName: Full=Inner membrane protein oxaA gi|56603882|emb|CAG44866.1| Inner-membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320194|emb|CAL08249.1| Inner-membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134050445|gb|ABO47516.1| inner-membrane protein of unknown function [Francisella tularensis subsp. tularensis WY96-3418] gi|151569153|gb|EDN34807.1| inner-membrane protein [Francisella tularensis subsp. tularensis FSC033] gi|254840227|gb|EET18663.1| inner-membrane protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282158529|gb|ADA77920.1| hypothetical protein NE061598_01330 [Francisella tularensis subsp. tularensis NE061598] Length = 551 Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 125/339 (36%), Positives = 198/339 (58%), Gaps = 34/339 (10%) Query: 228 SLVEQKYSDIEKS----SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 S ++ + DI K+ ++ N + W+ Y+ S +IP + T+ +K L +G Sbjct: 239 SFRKESFKDISKTNGQPTVIN-SDGQGWVAFLQHYFVSAWIP-QSTNAKIYYKNL-NGDV 295 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 F+ TI P +S ++ L+ G P I DLA P E +D+G F + Sbjct: 296 FEAGAFTG--ATIAPNQSENISSILYTG----PIIKANLVDLA-PNLEKTLDYGMLSFFS 348 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + +F +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E + Sbjct: 349 EIIFWVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETY 408 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI Sbjct: 409 KDDR-QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIH 467 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP Y + P++M LSMF+Q K+SP PAD QA ++ ++ Sbjct: 468 DLSMKDP------------YF-------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFL 508 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 PV+F F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 509 PVIFTFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|89255612|ref|YP_512973.1| inner-membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115314117|ref|YP_762840.1| inner membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|156501560|ref|YP_001427625.1| inner-membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010123|ref|ZP_02275054.1| inner-membrane protein [Francisella tularensis subsp. holarctica FSC200] gi|254367007|ref|ZP_04983043.1| conserved inner-membrane protein [Francisella tularensis subsp. holarctica 257] gi|290953728|ref|ZP_06558349.1| inner membrane protein oxaA [Francisella tularensis subsp. holarctica URFT1] gi|295312914|ref|ZP_06803635.1| inner membrane protein oxaA [Francisella tularensis subsp. holarctica URFT1] gi|122325838|sp|Q0BNY1|OXAA_FRATO RecName: Full=Inner membrane protein oxaA gi|122501296|sp|Q2A5M8|OXAA_FRATH RecName: Full=Inner membrane protein oxaA gi|166975865|sp|A7N9L6|OXAA_FRATF RecName: Full=Inner membrane protein oxaA gi|89143443|emb|CAJ78619.1| Inner-membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115129016|gb|ABI82203.1| inner membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|134252833|gb|EBA51927.1| conserved inner-membrane protein [Francisella tularensis subsp. holarctica 257] gi|156252163|gb|ABU60669.1| inner-membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 551 Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 125/339 (36%), Positives = 198/339 (58%), Gaps = 34/339 (10%) Query: 228 SLVEQKYSDIEKS----SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 S ++ + DI K+ ++ N + W+ Y+ S +IP + T+ +K L +G Sbjct: 239 SFRKESFKDISKTNGQPTVIN-SDGQGWVAFLQHYFVSAWIP-QSTNAKIYYKNL-NGDV 295 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 F+ TI P +S ++ L+ G P I DLA P E +D+G F + Sbjct: 296 FEAGAFTG--ATIAPNQSENISSILYTG----PIIKANLVDLA-PNLEKTLDYGMLSFFS 348 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + +F +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E + Sbjct: 349 EIIFWVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETY 408 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI Sbjct: 409 KDDR-QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIH 467 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP Y + P++M LSMF+Q K+SP PAD QA ++ ++ Sbjct: 468 DLSMKDP------------YF-------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFL 508 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 PV+F F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 509 PVIFTFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|291615646|ref|YP_003518388.1| YidC [Pantoea ananatis LMG 20103] gi|291150676|gb|ADD75260.1| YidC [Pantoea ananatis LMG 20103] gi|327395912|dbj|BAK13334.1| preprotein translocase subunit YidC [Pantoea ananatis AJ13355] Length = 548 Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 164/573 (28%), Positives = 268/573 (46%), Gaps = 59/573 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S +I AWQ ++ K +QT Q Q NS A Sbjct: 4 QRNLFLIAFLFVSFMIWQAWQT----------DHAPKPLQT--QTTQNTNSAAGDAAGQG 51 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNAY 120 A + +K L +IN +G D L Y + S+ P L +PS A Sbjct: 52 VPASGQGKTITVKTDVLSLTINTRGGDVDQAQLLTYPDKLGSDKPFELLETTPSFVYQAQ 111 Query: 121 --FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 + NN P NT + + + F N +++ +T Sbjct: 112 SGLTGRNGPDNPNNGARPLYNTAQDHFELAEGQSELRVPMTFTAENGVVYTKTFVFKRGD 171 Query: 179 LFKIVDTVTNNSIDQ-IRFSPRGRIM------RHKPQTATNTFGVQEGFIAVLGDKSLVE 231 VD NN+ Q + S G++ +H+ T +N F + F S E Sbjct: 172 YAVNVDYNINNTSQQPLELSMFGQLKQTIDLPKHR-DTGSNNFALHT-FRGTAYSTS--E 227 Query: 232 QKYSDIEKSSIS-----NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 KY I+ +I+ N SN W+ + +Y+A+ ++P + + L +G A Sbjct: 228 SKYEKIKFDTIADNENLNTTTSNGWVAMLQQYFATAWVPRTQGTNTLYTSNLGNGVAA-- 285 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + +T+ PG T L+ G P I +A P ++ +D+GW +FI++P+ Sbjct: 286 IGYKSAPVTVAPGAQQTLDATLWVG----PEIQDKMAAIA-PHLDLTVDYGWLWFISQPL 340 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 FKLLKFIHSFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+ Sbjct: 401 -KQKQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFILWIHDLS 459 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A D P+Y I PI+M ++MF KMSP D Q I+ +MPV Sbjct: 460 AQD-----------PYY--------ILPILMGITMFFIQKMSPTTVTDPMQQKIMTYMPV 500 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 IFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|88798542|ref|ZP_01114126.1| putative inner membrane protein translocase component YidC [Reinekea sp. MED297] gi|88778642|gb|EAR09833.1| putative inner membrane protein translocase component YidC [Reinekea sp. MED297] Length = 559 Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 128/390 (32%), Positives = 208/390 (53%), Gaps = 41/390 (10%) Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG------DKSLVE 231 Y+ + +TN D +R + G++ R + Q + G+ G + LG D + + Sbjct: 189 YVMDVRFDLTNQGSDTLRTNLFGQLRRDRSQDPSAGSGI--GMRSYLGATFSTEDSAYEK 246 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS--KETSFHSQFKYLSDGHARYQAKF 289 K+ +++ N + W+ + Y+ S +IPS +F+ Q D Y F Sbjct: 247 VKFGELDDGRF-NGSKVGGWVAMLQHYFLSAWIPSANDNNAFYGQKGSTGD----YYVGF 301 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 A + + PG+S++T L+ G K+ + +L E +D+GW ++IA+P+F L Sbjct: 302 QAPTVVVGPGESVSTGAQLYVGPKDQDQLDELADNL-----EKTVDYGWLWWIAQPLFWL 356 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M + + L+GN+G +I+L T+ VK++ +PL Y S M+ P I ELRE++ Q Sbjct: 357 MQFIHGLIGNWGWSIVLMTLTVKMVLYPLTASSYRSMGKMRKFAPVISELREQYGDD-RQ 415 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M++LY+ +NPL GC P+L+Q+PVF A+Y V+ S+E+R +PF WI+DL+ D Sbjct: 416 KMSQEMMKLYQKEKLNPLGGCLPMLVQMPVFIALYWVLMESVELRQSPFIFWIQDLSLKD 475 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFV 528 P F L P++M SMF+QM+M P D Q I+ +MPV+F Sbjct: 476 P--FFVL-----------------PLLMGASMFLQMRMQQQPTMDPMQQKIMQFMPVMFT 516 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FPAGL +YW +NVI+IVQQ ++ K Sbjct: 517 FMFLWFPAGLTLYWFTNNVITIVQQYIVNK 546 >gi|283851181|ref|ZP_06368464.1| 60 kDa inner membrane insertion protein [Desulfovibrio sp. FW1012B] gi|283573350|gb|EFC21327.1| 60 kDa inner membrane insertion protein [Desulfovibrio sp. FW1012B] Length = 530 Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 163/564 (28%), Positives = 261/564 (46%), Gaps = 56/564 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N +A+ LS+ ++ W +++P + QT Q A A Sbjct: 2 ENKRVILAVVLSLAVLVGWN--FLFPAKPQAPKTDTPTQTEAPTAQAPAPAAQRAETLPA 59 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 A + +V + P N G + +L+GY ++ +SP+V L+ N K A Sbjct: 60 FAPTPGRKVTVNTPLYTAVFNSAGGVLEQFSLKGYRQTIAPDSPLVDLV---NAKAQLKA 116 Query: 123 ELDYVSTANNIELPN-SNTVWNLISGKI-LTPTTPIKLVFKNA-NNILFERTISLD-EHY 178 L + P N W++ G + L L F + L RT++ Y Sbjct: 117 PLGLIVNGT----PTWQNVEWSVEGGDLKLDAAGAGSLSFTGRLGDTLIRRTLTFSGASY 172 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 L +++N ++ + + A +++ + A D L + +S+ + Sbjct: 173 LIDEKLSLSNTGAAPVKDRLSLTVAVDRLSAADDSYNPTQ---AAFYDTGL--ELFSNEK 227 Query: 239 KSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 K + E W + Y+ IP E + K+ + ++ + I I Sbjct: 228 KLAEGMTDEKPVQWGAVMSNYFLVGIIPEAE-GLRGKAKFEDE---IFRVALDKDGIEIP 283 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G + G K+ + +LA ID+GWF FIAKP+ L+ +FY+ V Sbjct: 284 AGGRTDLDVRYYLGPKDPKFLAQAPHNLA-----AAIDYGWFDFIAKPLLKLLHFFYDYV 338 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G+AI+L TV +K LF+PL+ K Y S MK +QP + +LREK K Q + + M+Q Sbjct: 339 GNYGVAIILLTVLIKGLFWPLSHKSYKSMEQMKRLQPLLTQLREKHKDD-RQKMNEEMMQ 397 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIKDLAAAD 469 LYKT+ +NP GC P+++QIPVFF +Y+ + S+E+RHAPF W+ DL+A D Sbjct: 398 LYKTYKVNPAGGCLPMIVQIPVFFGLYQALLHSIELRHAPFIAHLPFTNMIWLADLSAKD 457 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P+Y I P++M +MF+Q KM+P P D QA ++ MPV+F F Sbjct: 458 -----------PYY--------ITPLVMGATMFLQQKMTPAPGDPTQAKVMLLMPVIFTF 498 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQ 553 +FP+GL++YW +NVISI QQ Sbjct: 499 MFLNFPSGLVVYWLVNNVISIAQQ 522 >gi|208780038|ref|ZP_03247381.1| 60Kd inner membrane protein [Francisella novicida FTG] gi|208744042|gb|EDZ90343.1| 60Kd inner membrane protein [Francisella novicida FTG] Length = 530 Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 126/339 (37%), Positives = 198/339 (58%), Gaps = 34/339 (10%) Query: 228 SLVEQKYSDIEKS----SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 S ++ + DI K+ ++ N + W+ Y+ S +IP + T+ +K L +G Sbjct: 218 SFRKESFKDISKTNGQPTVIN-SDGQGWVAFLQHYFVSAWIP-QSTNAKIYYKNL-NGDV 274 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 F+ TI P +S ++ L+ G P I DLA P E +D+G F + Sbjct: 275 FEAGAFTG--ATIAPNQSENISSILYTG----PIIKANLVDLA-PNLEKTLDYGMLSFFS 327 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + +F +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E + Sbjct: 328 EIIFWVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETY 387 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI Sbjct: 388 KDDR-QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIH 446 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP F L P++M LSMF+Q K+SP PAD QA ++ ++ Sbjct: 447 DLSMKDP--YFVL-----------------PVLMGLSMFLQQKLSPAPADPMQAKVMMFL 487 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 PV+F F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 488 PVIFTFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 526 >gi|145630098|ref|ZP_01785880.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae R3021] gi|144984379|gb|EDJ91802.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae R3021] Length = 541 Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 117/327 (35%), Positives = 194/327 (59%), Gaps = 30/327 (9%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSAN 292 +SD++ +++S W+ + Y+ S +IP+++ ++Q ++D + + Sbjct: 231 FSDMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGP 287 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 +TI G T T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ Sbjct: 288 VVTIPSGSQETITSSLWTG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTF 342 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + Sbjct: 343 IQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-RQRMS 401 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D Sbjct: 402 QEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD--- 458 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 P+Y I PI+M +SMF+ KMSP P D Q ++N+MP++F+ Sbjct: 459 --------PYY--------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIFMVFF 502 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++YW SN+I+I QQ +I + Sbjct: 503 LWFPSGLVLYWLVSNLITIAQQQLIYR 529 >gi|77166533|ref|YP_345058.1| 60 kDa inner membrane insertion protein [Nitrosococcus oceani ATCC 19707] gi|254435359|ref|ZP_05048866.1| 60Kd inner membrane protein [Nitrosococcus oceani AFC27] gi|123593186|sp|Q3J6L8|OXAA_NITOC RecName: Full=Inner membrane protein oxaA gi|76884847|gb|ABA59528.1| protein translocase subunit yidC [Nitrosococcus oceani ATCC 19707] gi|207088470|gb|EDZ65742.1| 60Kd inner membrane protein [Nitrosococcus oceani AFC27] Length = 545 Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 149/509 (29%), Positives = 252/509 (49%), Gaps = 45/509 (8%) Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN---- 115 D A L+ +E+K L I + ++ L Y + + + VTLL + Sbjct: 66 DTAPILTGQKTIEVKTDLLAIKIGMASGDLYEVQLLNYPVSLKKPNEPVTLLHKRDPDLF 125 Query: 116 -TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 T++ A T ++ T + LI + + + L +++ N I +T Sbjct: 126 VTQSGLRAASGPSITHETVQFSAPKTYYELIEDE---SSLKVPLTWEDENGIKVTKTYIF 182 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV-QEGFIAVLGDKSLVEQK 233 ++ N DQ GR +T + G+ ++ + S EQ+ Sbjct: 183 QRDSYQIDLNIKIENGTDQAWM---GRAYAQFSRTPPESGGMFARSYVGAV--FSTQEQE 237 Query: 234 YSDIEKSSIS----NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 Y ++ ++ + S W+ + Y+ + ++P ++ + + K++ + +RY A Sbjct: 238 YQKVDFGDLASQSFDRRSSGGWVAMIQHYFVAAWVPREQGTNYYYGKHVQN--SRYIAGV 295 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + TI PG+S LF G P I +A P+ + +D+G +A+P+F L Sbjct: 296 MPPQQTIAPGESGQFNLALFTG----PKIQDQLAAVA-PKLNLTVDYGKLTILAEPLFWL 350 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 MS+F+NLVGN+G AI+L T VKL+FF L++ Y S A M+ +QP++ L+E++ + Sbjct: 351 MSWFHNLVGNWGWAIVLLTFVVKLVFFKLSQTSYRSMARMRKLQPRLLALKERYGDDRQK 410 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 V Q AM++LY+ +NP+ GC PI++QIPVF A+Y ++ S+E+R APF WI+DL + D Sbjct: 411 VGQ-AMMELYRKEKVNPMGGCLPIVVQIPVFIALYWMLLESVELRQAPFIFWIQDLTSKD 469 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I P++M +SMF+Q K+SP P D QA ++ MPV+F Sbjct: 470 PYYIL-------------------PLLMGVSMFVQQKLSPAPTDPIQAKVMALMPVMFTV 510 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N++SI QQ I + Sbjct: 511 FFVMFPAGLVLYWVVNNILSIAQQWYITR 539 >gi|94312544|ref|YP_585754.1| putative inner membrane protein translocase component YidC [Cupriavidus metallidurans CH34] gi|166977403|sp|Q1LH91|OXAA_RALME RecName: Full=Inner membrane protein oxaA gi|93356396|gb|ABF10485.1| inner membrane insertion protein YidC/OxaA [Cupriavidus metallidurans CH34] Length = 555 Score = 216 bits (550), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 157/502 (31%), Positives = 245/502 (48%), Gaps = 49/502 (9%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 +V + + I+ G L L H +P+V L N Y A + Sbjct: 83 KVTVTTDEVRAEIDTAGGILSRLELLNEH--EKDGAPVVLLERDVN--RTYLARSGLIGG 138 Query: 130 ANNIELPNSNTVWNLISG-KILTPTTPIKLVFKNA--NNILFERTISLDEHYLFKIVDT- 185 +LPN TV+ + G + L P V A N + F +T + H +VDT Sbjct: 139 ----DLPNHTTVFTVAPGARTLAPGQDKLDVVLTAEKNGVKFVKTYTF--HKGSYVVDTR 192 Query: 186 --VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSI 242 VTN + + + R + + F A+ + + + DI K Sbjct: 193 FDVTNTGTAAVSPTLYLELARDGSKVEKSQFYSTFTGPAIYTNADKYHKLTFEDIAKGKA 252 Query: 243 S-NFHESNSWLGISDKYWASVFIP--SKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + N W+ + Y+AS +IP K+ SF+++ Y+ + PG Sbjct: 253 TVPAATDNGWVAMVQHYFASAWIPQTGKQHSFYAE----QIDPNLYRVGIQQPLGQLAPG 308 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 +++T LFAG +E + P E++ D+GW +AKP+F L+ + +GN Sbjct: 309 ATVSTDARLFAGPQEERMLEQI-----TPGLELVKDYGWLTILAKPLFWLLEKLHGFLGN 363 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G +I+ TV +KL+FFPL+ Y S MK++QP++ +RE+ K P Q + + M+ LY Sbjct: 364 WGWSIIGLTVLIKLVFFPLSAASYKSMGKMKDLQPRMTAIRERHKGDP-QKMNQEMMALY 422 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 +T +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ GWI DL+ D Sbjct: 423 RTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIHDLSVPD---------- 472 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 PFY I PI+M++SMF+Q +++P P D QA ++ MP+VF F FPAGL+ Sbjct: 473 -PFY--------ILPIVMAVSMFVQTRLNPTPPDPVQAKVMMIMPLVFSFMFFFFPAGLV 523 Query: 540 IYWSWSNVISIVQQAVIMKMHG 561 +YW +N++SI QQ I +M G Sbjct: 524 LYWVVNNILSIAQQWQINRMLG 545 >gi|241665033|ref|YP_002983393.1| inner membrane protein translocase component YidC [Ralstonia pickettii 12D] gi|240867060|gb|ACS64721.1| 60 kDa inner membrane insertion protein [Ralstonia pickettii 12D] Length = 554 Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 153/506 (30%), Positives = 245/506 (48%), Gaps = 54/506 (10%) Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 S ++ + L +I+ GA L L LD + +L + + Y A + Sbjct: 82 SEKIVISTDLLRATIDTDGAIVTKLEL----LDQKDHDGNPMVLFDRSVERTYLARSGLI 137 Query: 128 STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF---ERTISLDEHYLFK--- 181 + PN TV+ +G P L N +I + L + Y+FK Sbjct: 138 GG----DFPNHTTVFTASAG-------PRDLGTGNDVSITLTADKGGAKLAKTYVFKRGS 186 Query: 182 -IVDT---VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSD 236 ++DT VTN+ I + + R + F AV D + ++D Sbjct: 187 YVIDTRFDVTNDGTAPINPTLYMELARDGGAVEQSRFYSTFTGPAVYTDGDKFHKITFAD 246 Query: 237 IEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 I+K ++S W+ + Y+AS +IP+ + Y+ T Sbjct: 247 IDKGKAQVPAPTDSGWVAMVQHYFASAWIPADNVKREYYVNRVDTNF--YRIGIQEPLGT 304 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG S++ T LFAG ++ + P +++ D+GW +AKP+F L+ + Sbjct: 305 VAPGASVSATARLFAGPQQARMLESIT-----PGLDLVKDYGWLTIVAKPLFWLLEKIHA 359 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 L+GN+G +I+ TV +KL+FFPL+ Y S A MK++QP++ +RE+ K PQ + + M Sbjct: 360 LLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGD-PQKMNQEM 418 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY+T +NPL GC PI++QIPVF A+Y + S+EMR AP+ GW+ DL+ D Sbjct: 419 MTLYRTEKVNPLGGCLPIVIQIPVFMALYWALLSSVEMRGAPWIGWVHDLSTPD------ 472 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 PFY I P++M++SMF+Q K++P P D QA ++ +MP+ F FP Sbjct: 473 -----PFY--------ILPVLMAVSMFVQTKLNPTPPDPVQAKVMMFMPIAFSVMFFFFP 519 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHG 561 AGL++YW +N +SI QQ I +M G Sbjct: 520 AGLVLYWVVNNCLSIAQQWSINRMLG 545 >gi|152979764|ref|YP_001345393.1| putative inner membrane protein translocase component YidC [Actinobacillus succinogenes 130Z] gi|171704505|sp|A6VR61|OXAA_ACTSZ RecName: Full=Inner membrane protein oxaA gi|150841487|gb|ABR75458.1| 60 kDa inner membrane insertion protein [Actinobacillus succinogenes 130Z] Length = 537 Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 124/375 (33%), Positives = 205/375 (54%), Gaps = 31/375 (8%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS-DIEKSSISN 244 + N S + I P G+ ++H ++ + + +KYS D K + + Sbjct: 179 IRNQSDETIEVQPYGQ-LKHTLVESSGSMAMPTYTGGAYSSSETNYKKYSFDDMKGANLS 237 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 + W+ + Y+ S +IP+++ Y + + F +T+ G + T Sbjct: 238 VNTKAGWVAVLQHYFVSAWIPNQDADNQ---LYTTTNNGMGFIGFRGPTVTVPAGATETV 294 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 L+ G P + + ++A ++ +D+GW +FIAKP+F L++ +LV N+G+AI Sbjct: 295 KTALWTG----PKLQNQMGEVA-EHLDLTVDYGWAWFIAKPLFALLTLIQSLVSNWGLAI 349 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 + T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK + Sbjct: 350 IGVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERFGDD-RQRMSQEMMKLYKEEKV 408 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NPL GC P+L+Q+P+F A+Y ++E+RHAPF+GWI+DL+A D P+Y Sbjct: 409 NPLGGCLPLLIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQD-----------PYY- 456 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 I P++M SMF+ K+SP P AD Q ++N+MPV+F FPAGL++YW Sbjct: 457 -------ILPLLMGGSMFLLQKLSPTPVADPMQQKVMNFMPVIFTVFFLWFPAGLVLYWL 509 Query: 544 WSNVISIVQQAVIMK 558 SNVI+I+QQ +I + Sbjct: 510 VSNVITIIQQQLIYR 524 >gi|260912766|ref|ZP_05919252.1| YidC/Oxa1 family membrane protein insertase [Pasteurella dagmatis ATCC 43325] gi|260633144|gb|EEX51309.1| YidC/Oxa1 family membrane protein insertase [Pasteurella dagmatis ATCC 43325] Length = 541 Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 151/501 (30%), Positives = 252/501 (50%), Gaps = 50/501 (9%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV--- 127 + L+N L ++ G L + ++ SN+P L + N + Y A+ V Sbjct: 66 ITLENDVLRLKVDTLGGDVIHSELLKHDAELDSNTPFTLLTNKQN--HVYIAQSGLVGKD 123 Query: 128 ---STANNIELPNSNTVWNLISGK--ILTPTTPIKLVFKNANNILFERTISLDEH-YLFK 181 + A + L G+ ++ P LVF+ + + F + L + Y Sbjct: 124 GIDTKAGRASYQVEGDAFKLAEGQNELVVP-----LVFEK-DGVTFRKVFVLKRNAYDIS 177 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEK 239 + + N S I P G+ +RH T + +KYS +++K Sbjct: 178 VNFEIDNQSEKAIEVEPYGQ-LRHTLVEDTGNVAMPTYTGGAYSSSETNYKKYSFDEMQK 236 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSANEITILP 298 ++++ W+ + Y+ S +IP+++ +Q L+D + + I Sbjct: 237 ANLA-VSTKAGWVAVLQHYFVSAWIPNQDAD--NQLYSLTDKANNLASIGYRGPTTVISA 293 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G T T+ L+ G P + +A ++ +D+GW +FIAKP+F L+++ ++V Sbjct: 294 GAKETITSSLWTG----PKLQDQMAAVA-NHLDLTVDYGWAWFIAKPLFWLLTFIQSIVH 348 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F + Q + + M++L Sbjct: 349 NWGLAIIGVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERFGED-RQRMSQEMMKL 407 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D Sbjct: 408 YKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD--------- 458 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 P+Y I PI+M SMF+ KMSP P AD Q I+N+MP++F+ FP+G Sbjct: 459 --PYY--------ILPILMGASMFLLQKMSPTPVADPMQQKIMNFMPLIFMVFFLWFPSG 508 Query: 538 LIIYWSWSNVISIVQQAVIMK 558 L++YW SN+I+I QQ +I + Sbjct: 509 LVLYWLVSNLITIAQQQLIYR 529 >gi|254375202|ref|ZP_04990682.1| inner-membrane protein [Francisella novicida GA99-3548] gi|151572920|gb|EDN38574.1| inner-membrane protein [Francisella novicida GA99-3548] Length = 551 Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 124/339 (36%), Positives = 199/339 (58%), Gaps = 34/339 (10%) Query: 228 SLVEQKYSDIEKS----SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 S ++ + DI K+ ++ N + W+ Y+ S +IP + T+ +K L +G+ Sbjct: 239 SFRKESFKDISKTNGQPTVIN-SDGQGWVAFLQHYFVSAWIP-QSTNAKIYYKNL-NGNV 295 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 F+ TI P +S ++ L+ G P I DLA P E +D+G F + Sbjct: 296 FEAGAFTG--ATIAPNQSENISSILYTG----PIIKANLVDLA-PNLEKTLDYGMLSFFS 348 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + +F +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E + Sbjct: 349 EIIFWVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETY 408 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R +PF WI Sbjct: 409 KDDR-QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQSPFIFWIH 467 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP Y + P++M LSMF+Q K+SP PAD QA ++ ++ Sbjct: 468 DLSMKDP------------YF-------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFL 508 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 PV+F F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 509 PVIFTFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|148550509|ref|YP_001270611.1| putative inner membrane protein translocase component YidC [Pseudomonas putida F1] gi|166977400|sp|A5WBB7|OXAA_PSEP1 RecName: Full=Inner membrane protein oxaA gi|148514567|gb|ABQ81427.1| protein translocase subunit yidC [Pseudomonas putida F1] Length = 560 Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 132/379 (34%), Positives = 208/379 (54%), Gaps = 31/379 (8%) Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEK 239 ++D + + F+ R P ++T T G A L S +K S DI+K Sbjct: 200 LIDNQSGQAWSGNMFAQLKRDASGDPSSSTAT-GTATYLGAALWTASEPYKKVSMKDIDK 258 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 S+ + S W+ Y+ + +IP+K + Q + D Y ++ I++ G Sbjct: 259 GSLKE-NVSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--KDSQGNYIIGYTGPVISVPAG 315 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + T+ L+AG P I K+L+ P E+ +D+G+ +FIA+P+F L+ + ++L+GN Sbjct: 316 GKVETSALLYAG----PKIQSKLKELS-PGLELTVDYGFLWFIAQPIFWLLQHIHSLLGN 370 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+F Q + +AM++LY Sbjct: 371 WGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALKERFGDD-RQKMSQAMMELY 429 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ WI DL+ D Sbjct: 430 KKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWILWITDLSIKD---------- 479 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 PF+ I PIIM +MFIQ +++P P D QA ++ MP++F F FPAGL+ Sbjct: 480 -PFF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFPAGLV 530 Query: 540 IYWSWSNVISIVQQAVIMK 558 +YW +N +SI QQ I + Sbjct: 531 LYWVVNNCLSISQQWYITR 549 >gi|83649689|ref|YP_438124.1| putative inner membrane protein translocase component YidC [Hahella chejuensis KCTC 2396] gi|123529916|sp|Q2S6M5|OXAA_HAHCH RecName: Full=Inner membrane protein oxaA gi|83637732|gb|ABC33699.1| Preprotein translocase subunit YidC [Hahella chejuensis KCTC 2396] Length = 570 Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 129/366 (35%), Positives = 207/366 (56%), Gaps = 36/366 (9%) Query: 200 GRIMRHKPQ--TATNTFGVQEGFIAVLG--DKSLVEQKYSDIEKSSISNF--HESNSWLG 253 +++R K T + FG AV+ +K + +SD+E+S S + SN W+ Sbjct: 220 AKLVRDKSPDPTFSGGFGAASFLGAVVSTPEKPYEKIDFSDMEESGPSGVKVNSSNGWIA 279 Query: 254 ISDKYWASVFIP-SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 Y+ S +IP S +T H+ L +G Y F E T+ PG++ L+AG Sbjct: 280 FIQHYFVSAWIPLSNDT--HTYQTRLRNG--LYLMGFVDPEFTVEPGQTHNVGAKLYAG- 334 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 P I K++A P ++ +D+GW + IAKP+++++ + ++ VGN+GIAI+L TV +K Sbjct: 335 ---PKIMETLKEVA-PNLDLTVDFGWLWLIAKPLYLVLEFIHDYVGNWGIAIILLTVLIK 390 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 LFF L+ Y S ANM+ + P++ +RE++ Q + +AM++LYK INPL GC P Sbjct: 391 ALFFHLSATSYRSMANMRRVTPEMQRIREQYGDD-RQRMSQAMMELYKKEKINPLGGCLP 449 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+Q+PVF ++Y V+ S+++R APF+ WI+DL+ DP F L Sbjct: 450 MLVQMPVFISLYWVLLESVQLRQAPFFFWIQDLSIKDP--YFVL---------------- 491 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P++M +MF+Q ++P P D QA ++ MP++F FPAGL++YW +N++SI Q Sbjct: 492 -PLLMGAAMFLQTSLNPTPPDPIQARVMKMMPIIFTVFFLWFPAGLVLYWLVNNILSIAQ 550 Query: 553 QAVIMK 558 Q I K Sbjct: 551 QWYITK 556 >gi|241667555|ref|ZP_04755133.1| hypothetical protein FphipA2_02215 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876100|ref|ZP_05248810.1| inner-membrane protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842121|gb|EET20535.1| inner-membrane protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 551 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 125/342 (36%), Positives = 201/342 (58%), Gaps = 34/342 (9%) Query: 225 GDKSLVEQKYSDIEKS----SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + S ++ + DI K+ ++ N + W+ Y+ S +IP S S+ Y + Sbjct: 236 ANDSFRKESFKDISKTNGQPTVIN-SQGLGWVAFIQHYFVSAWIPQ---SNDSKIYYKNL 291 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 + ++A + I+I P +S + + L++G P I DLA P E +D+G Sbjct: 292 NNDVFEAG-AYTGISIAPNQSESIDSVLYSG----PIIKANLVDLA-PNLEKTLDYGMLS 345 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F ++ +F +M+ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP++ L+ Sbjct: 346 FFSEIIFWVMNQIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRVKRLQ 405 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E +K Q L K M+++YK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF Sbjct: 406 ETYKDDR-QALGKKMMEMYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIF 464 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP F L PI+M +SMF+Q K+SP PAD QA I+ Sbjct: 465 WIHDLSMKDP--YFVL-----------------PILMGISMFLQQKLSPAPADPMQAKIM 505 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++PV+F F +SFP+GL++YW +NVISI+QQ +I + + A Sbjct: 506 MFLPVIFTFLFASFPSGLVLYWLTNNVISILQQWIITRHYQA 547 >gi|145634176|ref|ZP_01789887.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittAA] gi|148826353|ref|YP_001291106.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittEE] gi|166975868|sp|A5UD72|OXAA_HAEIE RecName: Full=Inner membrane protein oxaA gi|145268620|gb|EDK08613.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittAA] gi|148716513|gb|ABQ98723.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittEE] Length = 541 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 123/376 (32%), Positives = 210/376 (55%), Gaps = 31/376 (8%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 + N S I P G++ +++ N G + + + ++D++ +++S Sbjct: 182 IDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETNYKKYSFADMQDNNLS- 240 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSANEITILPGKSIT 303 W+ + Y+ S +IP+++ ++Q ++D + + +TI G T Sbjct: 241 IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGPVVTIPAGSQET 298 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ +V N+G+A Sbjct: 299 ITSSLWTG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTFIQGIVSNWGLA 353 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK Sbjct: 354 IICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-RQRMSQEMMKLYKEEK 412 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D P+Y Sbjct: 413 VNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD-----------PYY 461 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M +SMF+ KMSP P D Q ++N+MP++F+ FP+GL++YW Sbjct: 462 --------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIFMVFFLWFPSGLVLYW 513 Query: 543 SWSNVISIVQQAVIMK 558 SN+I+I QQ +I + Sbjct: 514 LVSNLITIAQQQLIYR 529 >gi|294638332|ref|ZP_06716585.1| membrane protein insertase, YidC/Oxa1 family [Edwardsiella tarda ATCC 23685] gi|291088585|gb|EFE21146.1| membrane protein insertase, YidC/Oxa1 family [Edwardsiella tarda ATCC 23685] Length = 555 Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 153/539 (28%), Positives = 266/539 (49%), Gaps = 55/539 (10%) Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPR---VELKNPSLIGSINLKGAQFDDLNLRGY 97 QT P V + + D +QA+ S + + +K L +IN +G + +L Y Sbjct: 38 QTDHNPQPVAQTAGQSVSDAASQAVPESGQGKLITVKTDVLALTINTRGGDIEQADLLAY 97 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-----LPNSN-TVWNLISGKILT 151 + SN+P L + + L S +N L N+N T + ++ G+ Sbjct: 98 PATLGSNTPFQLLETTPQFIYQAQSGLTGKSGPDNPANGPRPLYNANQTSYEMLPGQ--- 154 Query: 152 PTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM------R 204 I L + N +++ +T L + Y + V N+S + + + G++ + Sbjct: 155 DELRIPLTYTAPNGVVYTKTFVLKRNDYAIAVDYKVKNDSHEALDLTLFGQLKQSVDLPK 214 Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASV 262 H+ T ++ F + A QKYS DIE ++ N W+ + +Y+A+ Sbjct: 215 HR-DTGSSNFALHTFRGAAYSSSDDKYQKYSFSDIEDKNL-NVQTKGGWVAMLQQYFATA 272 Query: 263 FIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 +IP S + F + G+ + + A +++ P + L+ G + + Sbjct: 273 WIP--HDSGVNTFYTANLGNGQAAIGYKAPSVSVAPNTEQVLSTTLWVGPE-------LQ 323 Query: 323 KDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 D+A P ++ +D+GW +FI++P+F L+ ++ VGN+G AI++ T V+ + +PL K Sbjct: 324 SDMAAVAPHLDLTVDYGWLWFISQPLFKLLQLIHSFVGNWGFAIIIITFIVRGIMYPLTK 383 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 QY S A M+ +QPK+ +RE+ Q + + M+ LYK +NPL GC+P+L+Q+P+F Sbjct: 384 AQYTSMAKMRMLQPKLQAMRERIGDD-KQRMSQEMMALYKAEKVNPLGGCFPLLIQMPIF 442 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y ++ S+E+R APF WI DLAA D P+Y I PI+M ++ Sbjct: 443 LALYYMLMGSVELRQAPFALWIHDLAAPD-----------PYY--------ILPILMGVT 483 Query: 501 MFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MF KMSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 484 MFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 542 >gi|104784447|ref|YP_610945.1| putative inner membrane protein translocase component YidC [Pseudomonas entomophila L48] gi|123079038|sp|Q1I2H4|OXAA_PSEE4 RecName: Full=Inner membrane protein oxaA gi|95113434|emb|CAK18162.1| Preprotein translocase subunit YidC [Pseudomonas entomophila L48] Length = 561 Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 128/365 (35%), Positives = 202/365 (55%), Gaps = 31/365 (8%) Query: 196 FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEKSSISNFHESNSWLG 253 F+ R P ++T T G A L S +K S D++K + + + W+ Sbjct: 215 FAQLKRDASSDPSSSTAT-GTATYLGAALWTASEPYKKVSMKDMDKGGLQE-NVAGGWVA 272 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 Y+ + +IPSK + Q + D Y ++ + + G + T+ L+AG Sbjct: 273 WLQHYFVTAWIPSKSDNNAVQTR--KDSQGNYIIGYTGPALNVPAGGKVETSAMLYAG-- 328 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 P I K+L+ P E+ +D+G+ +FIA+P+F L+ + ++L+GN+G +I++ T+ +K Sbjct: 329 --PKIQSKLKELS-PGLELTVDYGFLWFIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKG 385 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 LFFPL+ Y S A M+ + PK+ +L+E+F Q + +AM++LYK INPL GC PI Sbjct: 386 LFFPLSAASYRSMARMRAVAPKLAQLKERFGDD-RQKMSQAMMELYKKEKINPLGGCLPI 444 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+PVF A+Y V+ S+EMR AP+ WI DL+ D PF+ I Sbjct: 445 LVQMPVFLALYWVLLESVEMRQAPWMLWITDLSIKD-----------PFF--------IL 485 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 PIIM +MFIQ +++P P D QA ++ MP++F F FPAGL++YW +N +SI QQ Sbjct: 486 PIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQ 545 Query: 554 AVIMK 558 I + Sbjct: 546 WYITR 550 >gi|145632386|ref|ZP_01788121.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 3655] gi|144987293|gb|EDJ93823.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 3655] Length = 541 Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 116/327 (35%), Positives = 194/327 (59%), Gaps = 30/327 (9%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSAN 292 +SD++ +++S W+ + Y+ S +IP+++ ++Q ++D + + Sbjct: 231 FSDMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGP 287 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 ++I G T T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ Sbjct: 288 VVSIPAGSQETITSSLWTG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTF 342 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + Sbjct: 343 IQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-RQRMS 401 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D Sbjct: 402 QEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD--- 458 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 P+Y I PI+M +SMF+ KMSP P D Q ++N+MP++F+ Sbjct: 459 --------PYY--------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIFMVFF 502 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++YW SN+I+I QQ +I + Sbjct: 503 LWFPSGLVLYWLVSNLITIAQQQLIYR 529 >gi|323700637|ref|ZP_08112549.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp. ND132] gi|323460569|gb|EGB16434.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio desulfuricans ND132] Length = 555 Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 165/575 (28%), Positives = 265/575 (46%), Gaps = 66/575 (11%) Query: 9 VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV---DNSYAAVLIDDRAQAL 65 +A+ LS I+++ WQ + P E+ + +Q AA L + A Sbjct: 11 IALVLSFIVLFGWQ-YLTGPSAEQKAEMARKAAEAEQKTAALTQKTQDAAELAKEAAPVA 69 Query: 66 SMSP----RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 P V + P +G + L+ Y + +SP V L+ P NA+ Sbjct: 70 DFVPTDGVSVTVDTPLYTAVFTSQGGVLEKFILKNYRETIQKDSPFVDLVGP----NAFA 125 Query: 122 -AELDYVSTANNIELPNSNTVWNLISGKILT----PTTPIKLVFKNANNILFERTISLD- 175 L + T N+ E SG LT T + ER ++ Sbjct: 126 KGPLGLILTLNDKEYHTWKRGKWAFSGSDLTLAEGDGTKTLTFTGQVDGYRIERVLTFHP 185 Query: 176 EHYLFKIVDTVTN----NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 + YL TVTN + + F+ + M + T + ++ K + + Sbjct: 186 DTYLIDESATVTNLTGTGAEGALSFTAAAKSMSDEDDRYNPT---KIAYLTKDTRKEMTD 242 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D++K I+ + W I Y+ IP E + S + D R Sbjct: 243 R--DDLKKDGITAPADLK-WGAIESNYFLFAVIPGGENASLS--GGVQDDIFRMAV---T 294 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 ++ T +P + T F G + ++ DLA +++GWF F+AKP+ + ++ Sbjct: 295 DKATFMPNVAKTLKTSYFVGPTDRKMLNAMPNDLADA-----VNFGWFDFLAKPLLVGLN 349 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 +FY VGN+G+AI++ TV +KL+F+PL++K Y S MK +QP + +LREK+ ++ Sbjct: 350 FFYGFVGNYGVAIIILTVIIKLIFWPLSQKSYGSMEKMKKLQPMVAKLREKYGDDKQRLN 409 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIK 463 Q+ M LYKT+ +NP+ GC P+++QIPVFF +YK + ++E+RHAPF W+ Sbjct: 410 QETM-ALYKTYKVNPMGGCLPMVVQIPVFFGLYKALLGAVELRHAPFIAHLPFTDLPWLA 468 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+A D P+Y I PIIM SMF+Q KM+P D Q I+ M Sbjct: 469 DLSAKD-----------PYY--------ISPIIMGASMFLQQKMTPSAGDPTQQKIMLIM 509 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P+VF F FP+GL+IYW ++N++SI QQ +I + Sbjct: 510 PLVFTFMFLQFPSGLVIYWLFNNLLSIGQQLMIAR 544 >gi|170697750|ref|ZP_02888837.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria IOP40-10] gi|170137365|gb|EDT05606.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria IOP40-10] Length = 553 Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 154/493 (31%), Positives = 242/493 (49%), Gaps = 45/493 (9%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D +TL + Y A + + PN N Sbjct: 90 GEIDTRGGTLAKLTLK-KQGDGKQPDLYITLFD-HTAGHTYLARTGLLGG----DFPNHN 143 Query: 140 TVWNLISGKILTPT---TPIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSIDQI 194 V+ ++ + T +KL F++ + +T + VDT +N + Sbjct: 144 DVYTQVNAGPTSLTGDQNALKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDN-VGTA 202 Query: 195 RFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGD-KSLVEQKYSDIEKSSISNFHES--N 249 +P + + TA T F+ AV D K + +SD++K+ +NF ++ N Sbjct: 203 PVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKIDFSDLDKNK-ANFEKTADN 261 Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 W+ + Y+AS +IP + + + A Y+ I PG+S LF Sbjct: 262 GWVAMVQHYFASAWIPQQGAKRDIYAEKIDP--ALYRVGVKQPVAAIAPGQSADVQARLF 319 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 AG +E + P E++ D+GW IAKP+F L+ + VGN+G AI+L TV Sbjct: 320 AGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTV 374 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT +NP G Sbjct: 375 LIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEKVNPFGG 433 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D PF+ Sbjct: 434 CLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRD-----------PFF------ 476 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 I P++M++SMF+Q ++P P D QA ++ +MP+ F FPAGL++Y+ +NV+S Sbjct: 477 --ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLS 534 Query: 550 IVQQAVIMKMHGA 562 I QQ I + G Sbjct: 535 IAQQYYITRKLGG 547 >gi|167036430|ref|YP_001671661.1| putative inner membrane protein translocase component YidC [Pseudomonas putida GB-1] gi|189036357|sp|B0KRC1|OXAA_PSEPG RecName: Full=Inner membrane protein oxaA gi|166862918|gb|ABZ01326.1| 60 kDa inner membrane insertion protein [Pseudomonas putida GB-1] Length = 560 Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 131/379 (34%), Positives = 207/379 (54%), Gaps = 31/379 (8%) Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEK 239 ++D + + F+ R P ++T T G A L S +K S DI+K Sbjct: 200 LIDNQSGQAWSGNMFAQLKRDASGDPSSSTAT-GTATYLGAALWTASEPYKKVSMKDIDK 258 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + + S W+ Y+ + +IP+K + Q + D Y ++ I++ G Sbjct: 259 GGLKE-NVSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--KDSQGNYIIGYTGPVISVPAG 315 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + T+ L+AG P I K+L+ P E+ +D+G+ +FIA+P+F L+ + ++L+GN Sbjct: 316 GKVETSAMLYAG----PKIQSKLKELS-PGLELTVDYGFLWFIAQPIFWLLQHIHSLLGN 370 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+F Q + +AM++LY Sbjct: 371 WGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALKERFGDD-RQKMSQAMMELY 429 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ WI DL+ D Sbjct: 430 KKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWMLWITDLSIKD---------- 479 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 PF+ I PIIM +MFIQ +++P P D QA ++ MP++F F FPAGL+ Sbjct: 480 -PFF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFPAGLV 530 Query: 540 IYWSWSNVISIVQQAVIMK 558 +YW +N +SI QQ I + Sbjct: 531 LYWVVNNCLSISQQWYITR 549 >gi|148266439|ref|YP_001233145.1| 60 kDa inner membrane insertion protein [Geobacter uraniireducens Rf4] gi|189036352|sp|A5G9V4|OXAA_GEOUR RecName: Full=Inner membrane protein oxaA gi|146399939|gb|ABQ28572.1| protein translocase subunit yidC [Geobacter uraniireducens Rf4] Length = 528 Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 120/335 (35%), Positives = 188/335 (56%), Gaps = 28/335 (8%) Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 L D + +K +D K + ++ W +DKY+ + + + + ++ + Sbjct: 218 LADDKINTEKVADFSKGP-KQYDKNILWTAFADKYFMNAILSDNNSIAAVRLAKVNTNY- 275 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Q S+ + + PG+S +F G K+ + R E ID+GWF +A Sbjct: 276 -LQDDVSSPPLALNPGQSAAVNYRIFYGPKDLEILKGQGS-----RLEEAIDFGWFSALA 329 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+ + +FY+ N+GIAI++ TV +KLLFFPL K Y S M+ +QPK+ EL+EKF Sbjct: 330 KPLLRTLKFFYSYTHNYGIAIIIITVILKLLFFPLTHKSYKSMKEMQKLQPKMAELKEKF 389 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K + +A++ LYKTH +NP+ GC P+++QIPVFFA+YK + S+E+RHAPF WI Sbjct: 390 KND-RDAMNRAVMDLYKTHKVNPMGGCLPMIVQIPVFFALYKALMFSIELRHAPFMLWIM 448 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+A D P+Y + P+IM ++MF+Q KM+P D QA ++ + Sbjct: 449 DLSAKD-----------PYY--------VTPVIMGVTMFVQQKMTPSNMDPVQAKMMLAL 489 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 PVVF F +FP+GL++YW +N+++I QQ I K Sbjct: 490 PVVFTFMFLNFPSGLVLYWLVNNILTIAQQTYINK 524 >gi|115353266|ref|YP_775105.1| putative inner membrane protein translocase component YidC [Burkholderia ambifaria AMMD] gi|122321904|sp|Q0BAQ2|OXAA_BURCM RecName: Full=Inner membrane protein oxaA gi|115283254|gb|ABI88771.1| protein translocase subunit yidC [Burkholderia ambifaria AMMD] Length = 554 Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 154/493 (31%), Positives = 242/493 (49%), Gaps = 45/493 (9%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D +TL + Y A + + PN N Sbjct: 91 GEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFD-HTAGHTYLARTGLLGG----DFPNHN 144 Query: 140 TVWNLISGKILTPT---TPIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSIDQI 194 V+ ++ + T +KL F++ + +T + VDT +N + Sbjct: 145 DVYTQVNAGPTSLTGDQNALKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDN-VGTA 203 Query: 195 RFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGD-KSLVEQKYSDIEKSSISNFHES--N 249 +P + + TA T F+ AV D K + +SD++K+ +NF ++ N Sbjct: 204 PVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKIDFSDLDKNK-ANFEKAADN 262 Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 W+ + Y+AS +IP + + + A Y+ I PG+S LF Sbjct: 263 GWVAMVQHYFASAWIPQQGAKRDIYAEKIDP--ALYRVGVKQPVAAIAPGQSADVQARLF 320 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 AG +E + P E++ D+GW IAKP+F L+ + VGN+G AI+L TV Sbjct: 321 AGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTV 375 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT +NP G Sbjct: 376 LIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNSALMELYKTEKVNPFGG 434 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D PF+ Sbjct: 435 CLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRD-----------PFF------ 477 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 I P++M++SMF+Q ++P P D QA ++ +MP+ F FPAGL++Y+ +NV+S Sbjct: 478 --ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLS 535 Query: 550 IVQQAVIMKMHGA 562 I QQ I + G Sbjct: 536 IAQQYYITRKLGG 548 >gi|206558829|ref|YP_002229589.1| putative inner membrane protein translocase component YidC [Burkholderia cenocepacia J2315] gi|254772759|sp|B4E7D5|OXAA_BURCJ RecName: Full=Inner membrane protein oxaA gi|198034866|emb|CAR50738.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 552 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 155/493 (31%), Positives = 241/493 (48%), Gaps = 45/493 (9%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D +TL + Y A + + PN N Sbjct: 89 GEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFD-HTAGHTYLARTGLLGG----DFPNHN 142 Query: 140 TVWNLI---SGKILTPTTPIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSIDQI 194 V+ + S + +KL F++ + +T + VDT +N + Sbjct: 143 DVYTQLNPGSTSLTGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDN-VGTA 201 Query: 195 RFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGD-KSLVEQKYSDIEKSSISNFHES--N 249 +P + + TA T F+ AV D K + +SD++K+ +NF +S N Sbjct: 202 PVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKIDFSDLDKNK-ANFEKSADN 260 Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 W+ + Y+AS +IP + + + A Y+ I PG+S LF Sbjct: 261 GWVAMVQHYFASAWIPQQGAKRDIYAEKIDP--ALYRVGVKQPVAAIAPGQSADVQARLF 318 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 AG +E + P E++ D+GW IAKP+F L+ + VGN+G AI+L TV Sbjct: 319 AGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGYVGNWGWAIVLLTV 373 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT +NP G Sbjct: 374 LIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEKVNPFGG 432 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D PF+ Sbjct: 433 CLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRD-----------PFF------ 475 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 I P++M++SMF+Q ++P P D QA ++ +MP+ F FPAGL++Y+ +NV+S Sbjct: 476 --ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLS 533 Query: 550 IVQQAVIMKMHGA 562 I QQ I + G Sbjct: 534 IAQQYYITRKLGG 546 >gi|170734513|ref|YP_001766460.1| putative inner membrane protein translocase component YidC [Burkholderia cenocepacia MC0-3] gi|254772758|sp|B1K0Y4|OXAA_BURCC RecName: Full=Inner membrane protein oxaA gi|169817755|gb|ACA92338.1| 60 kDa inner membrane insertion protein [Burkholderia cenocepacia MC0-3] Length = 553 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 155/493 (31%), Positives = 241/493 (48%), Gaps = 45/493 (9%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D +TL + Y A + + PN N Sbjct: 90 GEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFD-HTAGHTYLARTGLLGG----DFPNHN 143 Query: 140 TVWNLI---SGKILTPTTPIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSIDQI 194 V+ + S + +KL F++ + +T + VDT +N + Sbjct: 144 DVYTQLNPGSTSLTGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDN-VGTA 202 Query: 195 RFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGD-KSLVEQKYSDIEKSSISNFHES--N 249 +P + + TA T F+ AV D K + +SD++K+ +NF +S N Sbjct: 203 PVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKIDFSDLDKNK-ANFEKSADN 261 Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 W+ + Y+AS +IP + + + A Y+ I PG+S LF Sbjct: 262 GWVAMVQHYFASAWIPQQGAKRDIYAEKIDP--ALYRVGVKQPVAAIAPGQSADVQARLF 319 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 AG +E + P E++ D+GW IAKP+F L+ + VGN+G AI+L TV Sbjct: 320 AGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGYVGNWGWAIVLLTV 374 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT +NP G Sbjct: 375 LIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEKVNPFGG 433 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D PF+ Sbjct: 434 CLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRD-----------PFF------ 476 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 I P++M++SMF+Q ++P P D QA ++ +MP+ F FPAGL++Y+ +NV+S Sbjct: 477 --ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLS 534 Query: 550 IVQQAVIMKMHGA 562 I QQ I + G Sbjct: 535 IAQQYYITRKLGG 547 >gi|254363130|ref|ZP_04979180.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica PHL213] gi|261491963|ref|ZP_05988540.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496234|ref|ZP_05992639.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153095021|gb|EDN75576.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica PHL213] gi|261308065|gb|EEY09363.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312430|gb|EEY13556.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 541 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 126/406 (31%), Positives = 219/406 (53%), Gaps = 33/406 (8%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-T 213 + L F+ +++ +T +L Y + + NN+ I P G++ +++ N T Sbjct: 154 VPLTFEK-EGVVYTKTFTLKRGSYDVGVNFNIKNNTAQAIEVQPYGQLKHSIVESSGNLT 212 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 G + + + + D+EK+++S W+ + Y+ S ++P+++ +S Sbjct: 213 MPTYTGGAYSSSETNYKKYSFQDMEKANLS-VDTKAGWIAVLQHYFVSAWVPNQDAD-NS 270 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + ++G A + TI P + L+ G+K+ E + ++ Sbjct: 271 LYSRTNNGVATI--GYRGPLTTIAPNSEANLNSKLWTGSKD-----QKEMGESANHLDLT 323 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+GW +FIAKP+F L++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +Q Sbjct: 324 VDYGWAWFIAKPLFWLLTAIQKIVSNWGLAIIGVTIVVKTILYPLTKAQYTSMAKMRMLQ 383 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P+I E+RE+F Q + + M++LY+ +NP+ GC PIL+Q+P+F A+Y ++E+ Sbjct: 384 PRITEMRERFGDD-RQRMSQEMMKLYREEKVNPMGGCLPILIQMPIFIALYWTFMEAVEL 442 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512 RHAPF+GWI+DL+A D P+Y I P++M SMF+ KMSP P A Sbjct: 443 RHAPFFGWIQDLSAQD-----------PYY--------ILPLLMGGSMFLLQKMSPTPVA 483 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q ++ +MPV+F FP+GL++YW SN+I+I QQ +I + Sbjct: 484 DPVQQKVMTFMPVIFTVFFLWFPSGLVLYWLTSNLITIAQQWLIYR 529 >gi|302035743|ref|YP_003796065.1| inner-membrane protein insertion factor OxaA [Candidatus Nitrospira defluvii] gi|300603807|emb|CBK40139.1| Inner-membrane protein insertion factor OxaA [Candidatus Nitrospira defluvii] Length = 580 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 125/366 (34%), Positives = 191/366 (52%), Gaps = 44/366 (12%) Query: 209 TATNTFGV---QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP 265 T FG+ EGFI ++G SLV+ K + W I DKY+ SV +P Sbjct: 217 TLGTNFGIVEWGEGFIGLMGSASLVDDKVLKETPDGEAERKGDVKWSAIQDKYFLSVLMP 276 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 K ++ + K D +F+ P T L+AG KE+ T+ L Sbjct: 277 QKASAALA--KKEGDKLVSAGVRFAT------PVNGATMAMQLYAGPKEYDTLKRLNVGL 328 Query: 326 AIPRFEMLIDWGWFYF--------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 E ID+GWF F +AKP+F ++ + Y N+G+ I+L T+ +KL+F P Sbjct: 329 -----EDTIDFGWFVFGSWGLVKAVAKPIFYVLRFLYEFTHNYGVTIILLTMLIKLMFVP 383 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 L K Y S M+ IQPK+ L+ KFK + L K +I+LYK H +NP+ GC P++LQ+ Sbjct: 384 LQYKSYKSMKQMQVIQPKVLALQTKFKDDRER-LNKELIKLYKDHRVNPVGGCLPMVLQM 442 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 PVF A++ ++ +++++R APF WIKDL+ D P+Y + PI+M Sbjct: 443 PVFVALFNILYMTIDLRQAPFMLWIKDLSVQD-----------PYY--------VLPIVM 483 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +M IQ K++P D QA I+ ++PV F +FPAGL++YW +N ++I QQ V Sbjct: 484 GATMVIQQKITPTTMDPTQAKIMLFLPVFMTFLFVNFPAGLVLYWLTNNTLTITQQVVTE 543 Query: 558 KMHGAE 563 ++ G + Sbjct: 544 RLFGKK 549 >gi|172062138|ref|YP_001809790.1| putative inner membrane protein translocase component YidC [Burkholderia ambifaria MC40-6] gi|254772757|sp|B1YQJ7|OXAA_BURA4 RecName: Full=Inner membrane protein oxaA gi|171994655|gb|ACB65574.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria MC40-6] Length = 554 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 154/493 (31%), Positives = 242/493 (49%), Gaps = 45/493 (9%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D +TL + Y A + + PN N Sbjct: 91 GEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFD-HTAGHTYLARTGLLGG----DFPNHN 144 Query: 140 TVWNLISGKILTPT---TPIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSIDQI 194 V+ ++ + T +KL F++ + +T + VDT +N + Sbjct: 145 DVYTQVNAGPTSLTGDQNALKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDN-VGTA 203 Query: 195 RFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGD-KSLVEQKYSDIEKSSISNFHES--N 249 +P + + TA T F+ AV D K + +SD++K+ +NF ++ N Sbjct: 204 PVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKIDFSDLDKNK-ANFEKAADN 262 Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 W+ + Y+AS +IP + + + A Y+ I PG+S LF Sbjct: 263 GWVAMVQHYFASAWIPQQGAKRDIYAEKIDP--ALYRVGVKQPVAAIAPGQSADVQARLF 320 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 AG +E + P E++ D+GW IAKP+F L+ + VGN+G AI+L TV Sbjct: 321 AGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTV 375 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT +NP G Sbjct: 376 LIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEKVNPFGG 434 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D PF+ Sbjct: 435 CLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRD-----------PFF------ 477 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 I P++M++SMF+Q ++P P D QA ++ +MP+ F FPAGL++Y+ +NV+S Sbjct: 478 --ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLS 535 Query: 550 IVQQAVIMKMHGA 562 I QQ I + G Sbjct: 536 IAQQYYITRKLGG 548 >gi|303256374|ref|ZP_07342388.1| inner membrane protein OxaA [Burkholderiales bacterium 1_1_47] gi|331001500|ref|ZP_08325118.1| membrane protein insertase, YidC/Oxa1 family domain protein [Parasutterella excrementihominis YIT 11859] gi|302859865|gb|EFL82942.1| inner membrane protein OxaA [Burkholderiales bacterium 1_1_47] gi|329568229|gb|EGG50046.1| membrane protein insertase, YidC/Oxa1 family domain protein [Parasutterella excrementihominis YIT 11859] Length = 565 Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 157/535 (29%), Positives = 251/535 (46%), Gaps = 47/535 (8%) Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQ---FDDLNLRGY 97 QT P + + A I L +S + + +IGS K Q + D L G Sbjct: 59 QTASLPAEAKTAVKAEPIQVETDLLKLS--FDPEGAVIIGSELRKEKQTIPWTDTGLVGM 116 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 L + +P +L Y A+ + P T + L+ G + Sbjct: 117 ILGNKAETPADVVLFTEQKGRTYLAQTGLIGGP----YPTHKTQFKLVPGPLKMADGQDN 172 Query: 158 LVFK---NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTAT 211 L K + + ++ + + HY K+ V NN+ +I+ S ++ R KP+ + Sbjct: 173 LTVKFEGESGGVKVIKSFTFERGHYGIKVSHEVVNNTASEIKPSVYYQLTRDGEKPEGES 232 Query: 212 NTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHE--SNSWLGISDKYWASVFIPSKE 268 G AV DK ++ +SDI +F N W+ + Y+ S ++P++ Sbjct: 233 TMVNAYTG-AAVYTDKDKFQKVSFSDIADGD-KDFQAKADNGWIAMIQHYFVSAWVPTQG 290 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + + G Y TI P S T L++G ++ D P Sbjct: 291 VERENYTNTV--GEKLYAVGSIQQMDTIAPNSSKTIEATLYSGPQD-----QTRLDAIAP 343 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 +++D+GW F+AKP++ L+S+ Y +VGN+G AI+L T VK + +PL+ Y S A Sbjct: 344 GLSLVVDYGWLTFLAKPIYWLLSFLYGIVGNWGWAIVLLTCIVKAILYPLSLAGYRSMAK 403 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 MK++ P++ L+EK+ Q L AM+++YKT INP+ GC PI LQ+PVF A+Y V+ Sbjct: 404 MKDLGPRMKALKEKYGDD-KQRLNMAMMEMYKTEKINPVGGCLPIALQLPVFLALYWVLL 462 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S+E+R AP+ W+ DLAA DP I PI+M ++M IQ K++ Sbjct: 463 ASVELRDAPWIFWVTDLAAPDPWFIL-------------------PILMIITMVIQFKLN 503 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P P D QA ++ MP VF F +GL++YW +N++SI+QQ V+ K A+ Sbjct: 504 PTPPDPVQAKMMAIMPFVFGIMFIFFASGLVLYWLVNNILSIIQQYVVNKQIEAD 558 >gi|327398260|ref|YP_004339129.1| Membrane protein oxaA [Hippea maritima DSM 10411] gi|327180889|gb|AEA33070.1| Membrane protein oxaA [Hippea maritima DSM 10411] Length = 522 Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 108/307 (35%), Positives = 177/307 (57%), Gaps = 37/307 (12%) Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTN 306 E W+ + KY+ F+P S + + L+DG+ Y S ++TI Sbjct: 234 EDIHWIALESKYFCFAFLPQNSNSLLAGYTKLNDGNYVYVNLESPAKLTI---------- 283 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 +AG K TI + L + +I +G F FI KP+ ++++ Y++ GN+G+AI++ Sbjct: 284 --YAGPKSKETIAAVDHKL-----DKIIRFGMFGFIGKPLLYVLNWLYSIFGNYGVAIIV 336 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 T ++L+F+PL+ K + S M +QPK+ EL+ K+K P Q L KA ++LYK H +NP Sbjct: 337 LTFLIRLIFYPLSFKSFKSMKEMAKLQPKLKELQAKYKGKPDQ-LNKATMELYKKHKVNP 395 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 GC P+++QIPVFFA+Y V+ ++E+R APF WI DL++ D P+Y Sbjct: 396 FGGCLPVVIQIPVFFALYNVLLNAIELRGAPFMLWITDLSSKD-----------PYY--- 441 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 + PI+M L+M++Q K++P D Q I+ +MP++F F FP+GL++YW+ +N Sbjct: 442 -----VLPILMGLTMYVQQKLTPATGDPTQQKIMMFMPLIFTFMFMGFPSGLVLYWATNN 496 Query: 547 VISIVQQ 553 +++I QQ Sbjct: 497 LLTIAQQ 503 >gi|146328851|ref|YP_001209838.1| preprotein translocase subunit YidC [Dichelobacter nodosus VCS1703A] gi|146232321|gb|ABQ13299.1| preprotein translocase subunit YidC [Dichelobacter nodosus VCS1703A] Length = 544 Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 161/549 (29%), Positives = 263/549 (47%), Gaps = 76/549 (13%) Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSP-RVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 QTVK+ +D A S +P RV +K L + + +GA + L Y Sbjct: 42 QTVKKTETLDQQPPI-----SASETSEAPDRVRVKTDVLDIAFSTQGASIVEAKLLNYAF 96 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP---- 155 + + SP+ TLL N F + VS + PN + W + + P Sbjct: 97 TIDNKSPL-TLLHAENPSRMVF-QSGLVSQSGTTA-PNHFSQWKSAQKEYVLPDDAEHIS 153 Query: 156 IKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNS--------IDQIRFSPRGRIMRHK 206 + +++ + + F +T + Y F+I +TV N S QI F + M Sbjct: 154 VPFTWEDEHGVRFTKTFTFHRGTYRFEIEETVENQSERPWQGFAYRQIAFGEAAK-MGGL 212 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-------NSWLGISDKYW 259 Q AT T V S E +Y+ IE I++ ++ W+ + Y+ Sbjct: 213 GQVATFTGAV----------TSSEENRYNKIELKDIASAKKAKLNEVTQTGWVAMMQHYF 262 Query: 260 ASVFIPSK--ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317 + +P E ++Q+ + + E+TI P + + + G K Sbjct: 263 LAAVVPQSGVENRLYTQYD-----NGDHIVGTHDKEVTIAPRDTHHFKSTGYIGPK---- 313 Query: 318 IHHYEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 K+L+ P + ID+G+ + I++ MF +M++ Y ++GN+G AI++ T+ +K LF Sbjct: 314 ---ISKNLSAIAPYLDKTIDYGYLFMISQLMFHVMTFIYTVIGNWGGAIIVMTLLIKCLF 370 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 F + Y S A M+ +QP+I+ L+ ++ + Q +AM+QLY+ +NP +GC P+LL Sbjct: 371 FVPSAWAYKSMAKMRALQPEINRLKAQYGEDK-QAFSQAMMQLYRDRKVNPASGCLPMLL 429 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 QIP F A Y V++ S+E+RHAP+ GWI+DL++ DP I PI Sbjct: 430 QIPFFIAFYWVLAESVELRHAPWIGWIQDLSSMDPLYIL-------------------PI 470 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 I + MF+Q K++PPP D QA ++ MP+VF F FP+GL++YW+ SN SIVQQ V Sbjct: 471 INAALMFLQQKLNPPPPDPTQAKVMMMMPLVFGFMFMWFPSGLVLYWTMSNAFSIVQQYV 530 Query: 556 IMKMHGAEI 564 + K +G + Sbjct: 531 MNKRYGQRV 539 >gi|134096616|ref|YP_001101691.1| preprotein translocase membrane subunit [Herminiimonas arsenicoxydans] gi|166975870|sp|A4GAN3|OXAA_HERAR RecName: Full=Inner membrane protein oxaA gi|133740519|emb|CAL63570.1| Inner membrane protein OxaA [Herminiimonas arsenicoxydans] Length = 569 Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 147/481 (30%), Positives = 242/481 (50%), Gaps = 30/481 (6%) Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 I+ G + L L +H + +V L N ++ Y + + A PN + Sbjct: 97 GIDTAGGEVRHLELLKHHESGDESKNVV--LFDENGQHTYLGQTGLIGGA----YPNHKS 150 Query: 141 VWNLISG-KILTPTTPIKLVFKNAN-NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFS 197 ++ + G + L ++LV ++ + +T + Y I V NN+ I S Sbjct: 151 MFAAVPGPRTLDSANQVQLVLQSEQQGVKLIKTFTFKRGEYKVDIKHDVVNNTSTAITPS 210 Query: 198 PRGRIMRHKPQTATNTFGVQEGF----IAVLGDKSLVEQKYSDIEKSSISNFHESNS-WL 252 +++ + + F I DK + + IEK + + S W+ Sbjct: 211 LYLQLVHDGSALGGGSMFMASAFTGPAIYTEADK-FQKVTFESIEKGKAEHAMKGESGWI 269 Query: 253 GISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 + Y+ S F+P T K L+ Y T+ PG + + +++G Sbjct: 270 ALVQHYFVSAFVPPANTPREYFTKKLATN--LYAVGTILPMGTVAPGATASMDTTMYSGP 327 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 +E + + P FE++ D+GW IAKP+F LM + ++GN+G I++ T+ +K Sbjct: 328 QESKRL-----EAVAPGFELVKDYGWLTIIAKPIFWLMMQIHQILGNWGWTIIVLTIVIK 382 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 L FFPL+ Y S A MK + PK+ ++R ++K PQ + AM++LYK INP+ GC+P Sbjct: 383 LAFFPLSAAGYRSMAKMKLVTPKMTDIRTRYK-GEPQKMNAAMMELYKKEKINPIGGCFP 441 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+QIPVF ++Y V+ S+E+R+A W WI DLAA P +F + I F+L +GI Sbjct: 442 MLVQIPVFISLYWVLLASVEIRNAS-WLWIHDLAA--PDILFGSYHIGTFHLT----IGI 494 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 PI+M++SMFIQ K++P P D QA ++ +MP+ F FPAGL++YW +N++SI Q Sbjct: 495 LPILMAISMFIQTKLNPTPPDPIQAKVMMFMPIAFSVMFFFFPAGLVLYWVVNNILSIAQ 554 Query: 553 Q 553 Q Sbjct: 555 Q 555 >gi|307825357|ref|ZP_07655576.1| membrane protein insertase, YidC/Oxa1 family domain containing [Methylobacter tundripaludum SV96] gi|307733532|gb|EFO04390.1| membrane protein insertase, YidC/Oxa1 family domain containing [Methylobacter tundripaludum SV96] Length = 585 Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 153/515 (29%), Positives = 247/515 (47%), Gaps = 56/515 (10%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-----------------NSPIVTLLSP 113 + +K L I+LKG +L+L Y ++ S+ N+ V L + Sbjct: 94 ITVKTDVLALQIDLKGGTIQNLDLLTYPIEKSNTVVDKLRAMIGLSVAEKNTAPVRLFNS 153 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVW-NLISGKILTP---TTPIKLVFKNANNILFE 169 S K + A+ ++ + P+ +TV+ N + L P + + L + + N + Sbjct: 154 SQEK-LFVAQSGLIADSGFATAPSHHTVFKNEQTNYDLQPGQDSLTVPLTWTDNNGLTIT 212 Query: 170 RTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 + + Y + V N+S ++++ P T + + G A G Sbjct: 213 KLFTFKRGSYDITLEQKVKNDSAKPWSGRQYSQLLK-APDTTSKGGMLTGGMRAYDGGVI 271 Query: 229 LVE-QKYSDIEKSSISN----FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 E +KY I +S+ W + Y+AS +IP + H K L+DGH Sbjct: 272 YTEKEKYQKISFDDMSDENLDVATKGGWTALIQHYFASAWIPPADQENHFYTKVLNDGH- 330 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y + +T+ LFAG K P + P E+ +D+ + FI Sbjct: 331 -YVIGTYSAPVTVNANSDAQFVAQLFAGPKIQPMMEKIA-----PGLELTVDYSFLTFIG 384 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP++ L++ ++ GN+G+AI+ T+ +KLLFFPL++ Y S A M+ IQP++ EL+E+F Sbjct: 385 KPIYWLLNQIHDAAGNWGVAIIGVTLCIKLLFFPLSQSSYKSMAKMRKIQPRLKELQERF 444 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 P+ M+ LYK +NPL GC PIL+QIPVF +Y V+S ++E RHAPF WI+ Sbjct: 445 ADDRPR-FNTEMMALYKKEKVNPLGGCLPILVQIPVFMCLYWVLSETVEFRHAPFILWIQ 503 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL++ D PFY + P+IM ++M IQ ++P P D QA ++ Sbjct: 504 DLSSQD-----------PFY--------VLPVIMGITMKIQQSLNPAPIDPIQAKVMKMF 544 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P+VF FPAGL++YW +N +SI+QQ+ I K Sbjct: 545 PIVFTIFFLFFPAGLVLYWVVNNTLSIIQQSYITK 579 >gi|90413740|ref|ZP_01221728.1| putative inner membrane protein translocase component YidC [Photobacterium profundum 3TCK] gi|90325209|gb|EAS41706.1| putative inner membrane protein translocase component YidC [Photobacterium profundum 3TCK] Length = 538 Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 147/493 (29%), Positives = 239/493 (48%), Gaps = 56/493 (11%) Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 S++ G + L Y ++ S P + L + ++Y A+ + AN I+ N Sbjct: 77 SVDTLGGDVTEAKLLAYDNELDSADPFILLKDEAG--HSYIAQSGLIG-ANGIDSANGRA 133 Query: 141 V-------WNLISGK--ILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNS 190 + L G+ + P T +K + I + +T L + Y + T+ N S Sbjct: 134 QLAVTAKDFTLADGQDELRVPMTYVK------DGITYTKTFVLKRNSYAVDVEYTIDNQS 187 Query: 191 ID----QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 Q+ R +M T+ G + + + D++ S+ N Sbjct: 188 ASAASVQMYAQLRQNLMDDGSSLTMPTY---RGGAYSTDTTNYKKYSFDDMQDKSL-NMT 243 Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTN 306 +N W + Y+ S +IP E + + F S+G + TI G T T+ Sbjct: 244 TTNGWAAMLQHYFVSAWIPRSEEA-SNLFTRASNGQGYIGVRLPTT--TIAAGTEQTITS 300 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 L+ G K E + + +D+GW +FIA P+ L+S+ ++VGN+GIAIM+ Sbjct: 301 TLWVGPK-----LQKEMEATAANLNLTVDYGWLWFIASPLHKLLSFIQSIVGNWGIAIMM 355 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + M++LYK +NP Sbjct: 356 LTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERLGDD-RQRMSQEMMELYKKEKVNP 414 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 L GC PI+LQ+P+F A+Y + S+E+RH+PF+GWI DL+A D P+Y Sbjct: 415 LGGCLPIVLQMPIFIALYWSLMESVELRHSPFFGWIHDLSAQD-----------PYY--- 460 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 I P++M +SMF+ KMSP D Q I+ +MPV+F F FP+GL++YW S Sbjct: 461 -----ILPLLMGVSMFMIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVS 515 Query: 546 NVISIVQQAVIMK 558 NV++++QQ +I + Sbjct: 516 NVVTLIQQTLIYR 528 >gi|170724369|ref|YP_001752057.1| putative inner membrane protein translocase component YidC [Pseudomonas putida W619] gi|254773014|sp|B1JFV4|OXAA_PSEPW RecName: Full=Inner membrane protein oxaA gi|169762372|gb|ACA75688.1| 60 kDa inner membrane insertion protein [Pseudomonas putida W619] Length = 560 Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 131/379 (34%), Positives = 206/379 (54%), Gaps = 31/379 (8%) Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEK 239 ++D + + F+ R P ++T T G A L +K S DI+K Sbjct: 200 LIDNQSGQAWSGNMFAQLKRDASGDPSSSTAT-GTATYLGAALWTAGEPYKKVSMKDIDK 258 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 S+ + S W+ Y+ + +IP+K + Q + D Y ++ I++ G Sbjct: 259 GSLKE-NVSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--KDSQGNYIIGYTGPAISVPAG 315 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 T+ L+AG P I K+L+ P E+ +D+G+ +FIA+P+F L+ + ++L+GN Sbjct: 316 GKAETSAMLYAG----PKIQSKLKELS-PGLELTVDYGFLWFIAQPIFWLLQHIHSLLGN 370 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+F Q + +AM++LY Sbjct: 371 WGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALKERFGDD-RQKMSQAMMELY 429 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ WI DL+ D Sbjct: 430 KKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWMLWITDLSIKD---------- 479 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 PF+ I PIIM +MFIQ +++P P D QA ++ MP++F F FPAGL+ Sbjct: 480 -PFF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFPAGLV 530 Query: 540 IYWSWSNVISIVQQAVIMK 558 +YW +N +SI QQ I + Sbjct: 531 LYWVVNNCLSISQQWYITR 549 >gi|145638178|ref|ZP_01793788.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittII] gi|145272507|gb|EDK12414.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittII] gi|309751334|gb|ADO81318.1| Inner membrane translocation protein YidC [Haemophilus influenzae R2866] Length = 541 Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 115/327 (35%), Positives = 194/327 (59%), Gaps = 30/327 (9%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSAN 292 ++D++ +++S W+ + Y+ S +IP+++ ++Q ++D + + Sbjct: 231 FADMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGP 287 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 ++I G T T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ Sbjct: 288 VVSIPAGSQETITSSLWTG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTF 342 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + Sbjct: 343 IQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-RQRMS 401 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D Sbjct: 402 QEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD--- 458 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 P+Y I PI+M +SMF+ KMSP P D Q ++N+MP++F+ Sbjct: 459 --------PYY--------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIFMVFF 502 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++YW SN+I+I QQ +I + Sbjct: 503 LWFPSGLVLYWLVSNLITIAQQQLIYR 529 >gi|307133251|ref|YP_003885267.1| cytoplasmic insertase into membrane protein, Sec system [Dickeya dadantii 3937] gi|306530780|gb|ADN00711.1| cytoplasmic insertase into membrane protein, Sec system [Dickeya dadantii 3937] Length = 543 Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 151/569 (26%), Positives = 259/569 (45%), Gaps = 71/569 (12%) Query: 15 VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELK 74 ++I + F ++ + E N QT +Q N A + A + +K Sbjct: 8 LLIALLFVTFMIWQQWETDKNPPAATQTTQQANGAVGDAA----NQGVPASGQGKLITVK 63 Query: 75 NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS-----------------PSNTK 117 L +IN +G ++ +L Y ++ S+ P L + P N Sbjct: 64 TDVLSLNINTRGGDIEEADLLAYPAELGSSQPFKLLETTPAFTYQAQSGLTGKNGPDNPA 123 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE- 176 N + Y + A+ EL I L + +AN + F +T L Sbjct: 124 NG--SRPLYTAPADRFELAAGQNELR------------IPLTYTDANGVSFTKTFVLKRG 169 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQTATNTFGVQEGFIAVLGDKSLV 230 Y + V N S + + G++ + H+ T +N F + A Sbjct: 170 EYALNVEYGVNNASAQPLELTLFGQLKQSIDLPSHR-DTGSNNFALHTYRGAAFSSSDDK 228 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 +KYS + N W+ + +Y+A+ ++P+ + ++ F + G+ F Sbjct: 229 YRKYSFSDMKENLNITTQGGWVAMLQQYFATAWVPA--AAGNNTFYSANLGNGLAAIGFK 286 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 A + + PG L+ G P I +A P ++ +D+GW +FI++P+F L+ Sbjct: 287 APPVIVQPGSQQNLNATLWVG----PEIQDKMATVA-PHLDLTVDYGWLWFISQPLFKLL 341 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 342 KFLHGFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-KQR 400 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 401 MSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD- 459 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 P+Y + PI+M L+MF KMSP D Q I+ +MPV+F Sbjct: 460 ----------PYY--------VLPILMGLTMFFIQKMSPTTVTDPMQQKIMTYMPVIFTV 501 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I QQ +I + Sbjct: 502 FFLWFPSGLVLYYIVSNLVTIAQQQLIYR 530 >gi|119503568|ref|ZP_01625651.1| putative inner membrane protein translocase component YidC [marine gamma proteobacterium HTCC2080] gi|119460630|gb|EAW41722.1| putative inner membrane protein translocase component YidC [marine gamma proteobacterium HTCC2080] Length = 571 Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 126/388 (32%), Positives = 204/388 (52%), Gaps = 37/388 (9%) Query: 178 YLFKIVDTVTNNSID---QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 Y ++ + NN + I F+ R P T+ FG+Q A + E +Y Sbjct: 207 YTIEVSYHIVNNGTEIWQSIPFAQLKRDSSPAPSADTSGFGMQPFLGAA---TTTPENRY 263 Query: 235 SDIEKSSISN----FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + I++ ++ W+ + Y+ + +P E + + DG A F+ Sbjct: 264 EKFTFADIADDPWKTQQTGGWIAMLQHYFTAALVPDAEATHTYSTRRTRDGFNI--AGFT 321 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + + I PG++ + +AG K+ T+ +LA P E+++D+GW ++I KP+F L+ Sbjct: 322 SEPLRIAPGQTGSWNTQFYAGPKDQYTL----AELA-PHLELVVDYGWLWWIGKPLFWLL 376 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + ++V N+G+AI+L T+ +K FF L+ Y S A M+ QPK+ ++E+ Q Sbjct: 377 TQIQSVVINWGVAIILLTLLIKTAFFKLSAASYRSMAKMRKAQPKMVAIKEQHANDK-QK 435 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 +AM++LYK INP+ GC PIL+Q+PVF A+Y V+ S+E+R APF WIKDLA DP Sbjct: 436 QSQAMMELYKKEKINPMGGCLPILVQMPVFIALYWVLMESVELRQAPFALWIKDLAVMDP 495 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 + P++M SMF K++PPP D QA ++ W+PVVF F Sbjct: 496 YFVL-------------------PLMMGASMFFMQKLNPPPPDPMQAKLMQWLPVVFTFF 536 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N++S+ QQ I + Sbjct: 537 FLWFPAGLVLYWVVNNLLSMAQQYYITR 564 >gi|152998480|ref|YP_001343315.1| 60 kDa inner membrane insertion protein [Marinomonas sp. MWYL1] gi|189036353|sp|A6W3V1|OXAA_MARMS RecName: Full=Inner membrane protein oxaA gi|150839404|gb|ABR73380.1| 60 kDa inner membrane insertion protein [Marinomonas sp. MWYL1] Length = 551 Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 149/501 (29%), Positives = 242/501 (48%), Gaps = 48/501 (9%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 +E+ +L +IN G + L Y ++ P V L ++ Y + V Sbjct: 80 IEVTTDTLRVAINPVGGDLVEAALLQYKKELGQPDPFVIL--EDGSERTYVTQSGLVGQD 137 Query: 131 NNIELP-------NSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS-LDEHYLFKI 182 P + T + L G+ + + L + +A + + +T + Y + Sbjct: 138 GPDASPEGRPVYQSEKTAYTLADGE---NSLDVNLYYTDAKGVKYTKTFRFMKGKYRIRQ 194 Query: 183 VDTVTNNSIDQIRFSPRGRIMRH---KPQTATNTFGVQEGFIAVLGDKSLVEQK--YSDI 237 + TV N S + R + +I R P AT + G+Q + D+ K +SD+ Sbjct: 195 LITVDNTSSNTWRGNLFAQIKRDNTPDPSKAT-SMGLQPYLGGAISDEQTKYTKVSFSDM 253 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 ++ I + W+ + Y+ S +IP + Q + D + F+ + I Sbjct: 254 KEDPIKT-TTTKGWVAVLQHYFVSAWIPEQGQKVTLQARTNGDFNI---IGFTGTSVEIA 309 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PGK T ++ + G K + ++L ++ +D+GW +++AKP+F L++ + V Sbjct: 310 PGKQGTLSSTFYVGPKLQDHLESTAENL-----DLTVDYGWLWWLAKPLFWLLTLIQSFV 364 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+GIAI+L V VK +FF L+ Y S A M+ P+I +L+EK+ Q + + M+ Sbjct: 365 INWGIAIILIVVCVKAIFFKLSAASYRSMAKMRKFGPEIAKLKEKYGDDR-QKMSQEMMA 423 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK INPL GC PIL+Q+PVF ++Y V+ S+E+RHAPF+ WI DL+ DP I Sbjct: 424 LYKKEKINPLGGCLPILVQMPVFLSLYWVLMESVELRHAPFFLWIHDLSVMDPYFIL--- 480 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 PI+M +SMF+Q ++P P D QA I+ MPV F FPAG Sbjct: 481 ----------------PILMGISMFVQQSLNPTPPDPMQARIMKIMPVAFSIFFLWFPAG 524 Query: 538 LIIYWSWSNVISIVQQAVIMK 558 L++YW +N +SI+QQ VI K Sbjct: 525 LVLYWVTNNTLSILQQYVITK 545 >gi|149925381|ref|ZP_01913645.1| 60 kDa inner membrane insertion protein [Limnobacter sp. MED105] gi|149825498|gb|EDM84706.1| 60 kDa inner membrane insertion protein [Limnobacter sp. MED105] Length = 558 Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 137/435 (31%), Positives = 228/435 (52%), Gaps = 41/435 (9%) Query: 134 ELPNSNTVWNLISGKILTPTTP----IKLVFKNANNILFERTIS---LDEHYLFKIVDTV 186 + PN T++ L+SG T P +KLVFK A + E T + Y +V Sbjct: 145 DAPNHRTLFELVSGS--TEFAPGQDQLKLVFK-ATSGGIENTTTYTIFKNRYDIDLVINA 201 Query: 187 TNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 N ++ + S +I R + ++ ++ + G +K + + DI S Sbjct: 202 RNTGVEPVSPSAYVQITRDGNPLESDSSLYATFTGPAVYTPEKKYQKIDFEDIADRSADY 261 Query: 245 FHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 ++S WL + Y+ S + + + D + Y ++ T+ P ++ T Sbjct: 262 VKTADSGWLAMIQHYFVSAIV--GQDGPRENYTRQVDSN-LYSIGLVSSLGTLAPEQTAT 318 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T L+ G ++ + P ++++D+GW IA+P++ L+ ++ +GN+G A Sbjct: 319 YTAKLYTGPQDQSVLEALS-----PGLDLVVDYGWLTVIAQPIYWLLEKIHSYIGNWGWA 373 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ +KL+FFPL+ Y S A M+ + P++ +L+E++ Q+AM+++YK Sbjct: 374 IVVLTILIKLVFFPLSAASYKSMAKMRKVGPRMQKLKEQYGDDK-MGFQRAMMEMYKREK 432 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 INPL GC PIL+QIPVF A+Y V+ S+EMR+AP+ GW+ DLAA D PFY Sbjct: 433 INPLGGCMPILIQIPVFIALYWVLLASVEMRNAPWLGWVTDLAAPD-----------PFY 481 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 I P+IM+++MFIQ +++P P D QA I+ MP+VF FPAGL++YW Sbjct: 482 --------ILPVIMAVTMFIQTRLNPTPPDPVQAKIMMIMPLVFSVMFIFFPAGLVLYWV 533 Query: 544 WSNVISIVQQAVIMK 558 +N++SI QQ VI + Sbjct: 534 VNNILSIAQQWVITR 548 >gi|167560996|ref|ZP_02353912.1| putative inner membrane protein translocase component YidC [Burkholderia oklahomensis EO147] Length = 483 Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 148/495 (29%), Positives = 234/495 (47%), Gaps = 50/495 (10%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D VTL + + Y A + + PN N Sbjct: 19 GEIDTRGGTLAKLTLKK-EGDGKQPDLFVTLFDHAEN-HTYLARTGLLGG----DFPNHN 72 Query: 140 TVWNLISGKI----------LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNN 189 V+ ++G L+ +P+K K F R Y+ + + N Sbjct: 73 DVYAQVAGPTSLSGDQNTLKLSFESPVKGGVKVVKTYTFTRG-----SYVIGVDTKIDNV 127 Query: 190 SIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHES 248 + + ++R T F AV D+ ++ +SD++K+ + Sbjct: 128 GTAPVTPTVYMELVRDNTPVETPLFSHTFLGPAVYTDQKHFQKINFSDVDKNKADYVASA 187 Query: 249 -NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 N W+ + Y+AS +IP + + + Y+ I PG+S + Sbjct: 188 DNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPGQSADVSAR 245 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G AI+L Sbjct: 246 LFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLL 300 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT +NP Sbjct: 301 TLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEKVNPF 359 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 360 GGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFIL------------- 406 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ +NV Sbjct: 407 ------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNV 460 Query: 548 ISIVQQAVIMKMHGA 562 +SI QQ I + G Sbjct: 461 LSIAQQYYITRTLGG 475 >gi|254000529|ref|YP_003052592.1| 60 kDa inner membrane insertion protein [Methylovorus sp. SIP3-4] gi|253987208|gb|ACT52065.1| 60 kDa inner membrane insertion protein [Methylovorus sp. SIP3-4] Length = 549 Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 164/560 (29%), Positives = 269/560 (48%), Gaps = 54/560 (9%) Query: 8 FVAIALSVIIVY-AWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV-LIDDRAQAL 65 FV + S+++++ AWQ + P E + E +V ++ + AA + + L Sbjct: 9 FVIFSFSILMLWDAWQREHT-PPPETVTAEAATDNSVPHAEKLPGAKAAADMPKESGFRL 67 Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD 125 + R++++ I+ G L L + D S+ V LL Y A+ Sbjct: 68 QTADRIQVETDVYKAVIDTTGGDLRRLELLKHRADNSTTENFV-LLDDRAAPMVYVAQSG 126 Query: 126 YVSTANNIELPNSNTV-------WNLISGKILTPTTPIKLVFKNANNILFERTISLD-EH 177 + LPN TV + L +G + T ++L +A+ + ++ + + Sbjct: 127 LIGQG----LPNHKTVFTAEASNYQLAAG---SDTLEVRLTAASADGVKVDKIYTFHRDS 179 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN----TFGVQEGFIAVLGDKSLVEQK 233 Y+ + + N S I + +++ + TF F K L Sbjct: 180 YVINLRYEIHNESASPIDPTVYYQVVHDTESNQGSHMMPTFTGGAYFTQADKFKKL---S 236 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + D+ K+ +S S+ W+G+ Y+ S +IP + + K L+D Y ++ Sbjct: 237 FKDMGKNDLSKT-TSDGWVGLLQHYFVSAWIPKEGVTRQFYSKKLADN--IYSIGTKSDI 293 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 I PG S +AG P K +A P E +D+GW IA P+F ++S Sbjct: 294 GVIAPGASAEVDARYYAG----PQNQEVMKQVA-PGLEYTVDYGWLTIIASPLFWILSKI 348 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 ++V N+G+AI+L TV +KL F+PL+ Y S A+M+ + P++ L+E++ Q +Q Sbjct: 349 ESVVHNWGVAIILLTVMIKLAFYPLSAASYRSMAHMRELAPRLQRLKEQYGDDR-QKMQV 407 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 AM++LYKT INP+ GC PIL+QIPVF ++Y V+ S+EMRHAPF WI DL+A D Sbjct: 408 AMMELYKTEKINPMGGCLPILVQIPVFISLYWVLLGSVEMRHAPFMLWIHDLSAID---- 463 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 P+Y + PI+M +M IQ +++P P D QA ++ MP+VF Sbjct: 464 -------PYY--------VLPILMGATMIIQTRLNPTPTDPVQAKVMMIMPIVFSVFFFF 508 Query: 534 FPAGLIIYWSWSNVISIVQQ 553 FPAGL++YW +NV+SI QQ Sbjct: 509 FPAGLVLYWLVNNVLSIAQQ 528 >gi|167568260|ref|ZP_02361134.1| putative inner membrane protein translocase component YidC [Burkholderia oklahomensis C6786] Length = 497 Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 148/495 (29%), Positives = 234/495 (47%), Gaps = 50/495 (10%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D VTL + + Y A + + PN N Sbjct: 33 GEIDTRGGTLAKLTLKK-EGDGKQPDLFVTLFDHA-ANHTYLARTGLLGG----DFPNHN 86 Query: 140 TVWNLISGKI----------LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNN 189 V+ ++G L+ +P+K K F R Y+ + + N Sbjct: 87 DVYAQVAGPTSLSGDQNTLKLSFESPVKGGVKVVKTYTFTRG-----SYVIGVDTKIDNV 141 Query: 190 SIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHES 248 + + ++R T F AV D+ ++ +SD++K+ + Sbjct: 142 GTAPVTPTVYMELVRDNTPVETPLFSHTFLGPAVYTDQKHFQKINFSDVDKNKADYVTSA 201 Query: 249 -NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 N W+ + Y+AS +IP + + + Y+ I PG+S + Sbjct: 202 DNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPGQSADVSAR 259 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G AI+L Sbjct: 260 LFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLL 314 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT +NP Sbjct: 315 TLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEKVNPF 373 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 374 GGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFIL------------- 420 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ +NV Sbjct: 421 ------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNV 474 Query: 548 ISIVQQAVIMKMHGA 562 +SI QQ I + G Sbjct: 475 LSIAQQYYITRTLGG 489 >gi|313202488|ref|YP_004041146.1| 60 kda inner membrane insertion protein [Methylovorus sp. MP688] gi|312441804|gb|ADQ85910.1| 60 kDa inner membrane insertion protein [Methylovorus sp. MP688] Length = 549 Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 164/560 (29%), Positives = 269/560 (48%), Gaps = 54/560 (9%) Query: 8 FVAIALSVIIVY-AWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV-LIDDRAQAL 65 FV + S+++++ AWQ + P E + E +V ++ + AA + + L Sbjct: 9 FVIFSFSILMLWDAWQREHT-PPPETVTAEAATDNSVPHAEKLPGAKAAADMPKESGFRL 67 Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD 125 + R++++ I+ G L L + D S+ V LL Y A+ Sbjct: 68 QTADRIQVETDVYKAVIDTTGGDLRRLELLKHRADNSTTENFV-LLDDRAAPMVYVAQSG 126 Query: 126 YVSTANNIELPNSNTV-------WNLISGKILTPTTPIKLVFKNANNILFERTISLD-EH 177 + LPN TV + L +G + T ++L +A+ + ++ + + Sbjct: 127 LIGQG----LPNHKTVFTAEASNYQLAAG---SDTLEVRLTAASADGVKVDKIYTFHRDS 179 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN----TFGVQEGFIAVLGDKSLVEQK 233 Y+ + + N S I + +++ + TF F K L Sbjct: 180 YVINLRYEIHNESASPIDPTVYYQVVHDTESNQGSHMMPTFTGGAYFTQADKFKKL---S 236 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + D+ K+ +S S+ W+G+ Y+ S +IP + + K L+D Y ++ Sbjct: 237 FKDMGKNDLSKT-TSDGWVGLLQHYFVSAWIPKEGVTRQFYSKKLADN--IYSIGTKSDI 293 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 I PG S +AG P K +A P E +D+GW IA P+F ++S Sbjct: 294 GVIAPGASAEVEARYYAG----PQNQEVMKQVA-PGLEYTVDYGWLTIIASPLFWILSKI 348 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 ++V N+G+AI+L TV +KL F+PL+ Y S A+M+ + P++ L+E++ Q +Q Sbjct: 349 ESVVHNWGVAIILLTVMIKLAFYPLSAASYRSMAHMRELAPRLQRLKEQYGDDR-QKMQV 407 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 AM++LYKT INP+ GC PIL+QIPVF ++Y V+ S+EMRHAPF WI DL+A D Sbjct: 408 AMMELYKTEKINPMGGCLPILVQIPVFISLYWVLLGSVEMRHAPFMLWIHDLSAID---- 463 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 P+Y + PI+M +M IQ +++P P D QA ++ MP+VF Sbjct: 464 -------PYY--------VLPILMGATMIIQTRLNPTPTDPVQAKVMMIMPIVFSVFFFF 508 Query: 534 FPAGLIIYWSWSNVISIVQQ 553 FPAGL++YW +NV+SI QQ Sbjct: 509 FPAGLVLYWLVNNVLSIAQQ 528 >gi|313672991|ref|YP_004051102.1| membrane protein insertase, yidc/oxa1 family [Calditerrivibrio nitroreducens DSM 19672] gi|312939747|gb|ADR18939.1| membrane protein insertase, YidC/Oxa1 family [Calditerrivibrio nitroreducens DSM 19672] Length = 504 Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 137/405 (33%), Positives = 208/405 (51%), Gaps = 54/405 (13%) Query: 164 NNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 NNI +T ++ E YL + V+NNS ++ I + + + EG + Sbjct: 141 NNIGITKTYTIGKEGYLIDLNLKVSNNSDQTVKLEGNIDIGPGFGEGFEKSSYIFEGPMI 200 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 G+K E+ + K +I ++ W+G + KY+ I DG+ Sbjct: 201 YNGEKK--EEVAPEKIKDTIK--LDAPKWIGYTTKYYLIAAI---------------DGN 241 Query: 283 ARYQAKFSANEITILPG--------KSITTTNF-LFAGAKEFPTIHHYEKDLAIPRFEML 333 E I+ G KS + F ++ G KE+ + + L E Sbjct: 242 LELGKIEKVGESAIVKGVKQIILNPKSTSNIKFNIYVGPKEYDLLKSFNLGL-----EHS 296 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 ID+GWF F+A PM M + Y+ N+G+AI++ T+ VKLL +PL K S M+ IQ Sbjct: 297 IDFGWFKFLAVPMLKFMIFIYSFTKNYGVAIIILTIIVKLLTYPLTIKSMTSMKKMQQIQ 356 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ E++EKFK PQ + AM++LY+ H +NP+ GC P+++QIP+FFA+YK + +S+E+ Sbjct: 357 PKLMEIKEKFKND-PQKMNTAMMELYRKHGVNPMGGCLPMIIQIPIFFALYKALLVSVEL 415 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +PF WI DL+ D P+Y I PIIM ++MFIQ KM+P D Sbjct: 416 KGSPFILWITDLSEKD-----------PYY--------ITPIIMGITMFIQQKMTPSTMD 456 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I MPV+F F SFP+GL+IYW +N++SI+QQ I K Sbjct: 457 PMQQKIFLMMPVIFTFLFLSFPSGLVIYWLTNNILSIIQQYYINK 501 >gi|83719666|ref|YP_443729.1| inner membrane protein translocase component YidC [Burkholderia thailandensis E264] gi|167620894|ref|ZP_02389525.1| putative inner membrane protein translocase component YidC [Burkholderia thailandensis Bt4] gi|123536100|sp|Q2STM0|OXAA_BURTA RecName: Full=Inner membrane protein oxaA gi|83653491|gb|ABC37554.1| inner membrane protein, 60 kDa [Burkholderia thailandensis E264] Length = 557 Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 153/494 (30%), Positives = 241/494 (48%), Gaps = 50/494 (10%) Query: 80 GSINLKGAQFDDLNLR----GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 G I+ +G L L G D+S VTL + + Y A + + Sbjct: 93 GEIDTRGGTLAKLTLTKAGDGKQPDLS-----VTLFD-NAANHTYLARTGLLGG----DF 142 Query: 136 PNSNTVWNLISG--KILTPTTPIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSI 191 PN N V+ +G + +KL F++ + +T + VDT N + Sbjct: 143 PNHNDVYTQAAGPTSLAAGQNTLKLAFESPVKGGVKVVKTYTFTRGSYVIGVDTKIEN-V 201 Query: 192 DQIRFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGDKSLVEQ-KYSDIEKSSISNFHES 248 +P + + T+ T F+ AV D+ ++ +SDI+K+ + Sbjct: 202 GTAPVTPSVYMELVRDNTSVETPMFSHTFLGPAVYTDQKHFQKITFSDIDKNKADYVTSA 261 Query: 249 -NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 N W+ + Y+AS +IP + + + Y+ I PG+S + Sbjct: 262 DNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPGQSADVSAR 319 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 LFAG +E + +A P E++ D+GW IAKP+F L+ + VGN+G AI+L Sbjct: 320 LFAGPEE----ERMLEGIA-PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLL 374 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT +NP Sbjct: 375 TLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEKVNPF 433 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 434 GGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFIL------------- 480 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ +NV Sbjct: 481 ------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNV 534 Query: 548 ISIVQQAVIMKMHG 561 +SI QQ I + G Sbjct: 535 LSIAQQYYITRTLG 548 >gi|186477842|ref|YP_001859312.1| putative inner membrane protein translocase component YidC [Burkholderia phymatum STM815] gi|254772761|sp|B2JJR8|OXAA_BURP8 RecName: Full=Inner membrane protein oxaA gi|184194301|gb|ACC72266.1| 60 kDa inner membrane insertion protein [Burkholderia phymatum STM815] Length = 550 Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 124/334 (37%), Positives = 188/334 (56%), Gaps = 34/334 (10%) Query: 234 YSDIEKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + DI+K+ ++ S N W+ + Y+AS +IP + + + R K Sbjct: 243 FGDIDKNK-QDYATSADNGWVAMVQHYFASAWIPQQGAKRDIYVEKIDPSLYRVGVKQPL 301 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAKPMFML 349 TI PG++I + LFAG +E E+ L P E++ D+GW IAKP+F L Sbjct: 302 Q--TIAPGQTIDVSARLFAGPEE-------ERMLEGIAPGLELVKDYGWVTIIAKPLFWL 352 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ Sbjct: 353 LEKIHGYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQ 411 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D Sbjct: 412 KMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQD 471 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I P++M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 472 PYFIL-------------------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSV 512 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++Y+ +NV+SI QQ I +M G + Sbjct: 513 MFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGQK 546 >gi|295678214|ref|YP_003606738.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Burkholderia sp. CCGE1002] gi|295438057|gb|ADG17227.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Burkholderia sp. CCGE1002] Length = 552 Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 122/333 (36%), Positives = 192/333 (57%), Gaps = 34/333 (10%) Query: 234 YSDIEKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D++K+ +F S + W+ + Y+AS +IP + F + Y+ Sbjct: 244 FGDLDKNK-QDFATSANDGWVAMVQHYFASAWIP--QEGVKRDFYAEKIDPSLYRVGMKQ 300 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAKPMFML 349 TI PG++++ + LFAG +E E+ LA P +++ D+GW IAKP+F L Sbjct: 301 AMPTIQPGQTVSVSARLFAGPEE-------EQMLAGIAPGLDLVKDYGWVTIIAKPLFWL 353 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S ++ VGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK PQ Sbjct: 354 LSKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGD-PQ 412 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI+DL+ D Sbjct: 413 KMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWIWWIQDLSQQD 472 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I P++M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 473 PYFIL-------------------PVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSV 513 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 FPAGL++Y+ +NV+SI QQ I +M GA Sbjct: 514 MFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGA 546 >gi|107024094|ref|YP_622421.1| inner membrane protein translocase component YidC [Burkholderia cenocepacia AU 1054] gi|116691180|ref|YP_836803.1| putative inner membrane protein translocase component YidC [Burkholderia cenocepacia HI2424] gi|123071851|sp|Q1BSF7|OXAA_BURCA RecName: Full=Inner membrane protein oxaA gi|166975851|sp|A0KBN3|OXAA_BURCH RecName: Full=Inner membrane protein oxaA gi|105894283|gb|ABF77448.1| protein translocase subunit yidC [Burkholderia cenocepacia AU 1054] gi|116649269|gb|ABK09910.1| protein translocase subunit yidC [Burkholderia cenocepacia HI2424] Length = 552 Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 154/493 (31%), Positives = 240/493 (48%), Gaps = 45/493 (9%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D +TL + Y A + + PN N Sbjct: 89 GEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFD-HTAGHTYLARTGLLGG----DFPNHN 142 Query: 140 TVWNLI---SGKILTPTTPIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSIDQI 194 V+ + S + +KL F++ + +T + VDT +N + Sbjct: 143 DVYTQLNPGSTSLTGDENTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDN-VGTA 201 Query: 195 RFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGD-KSLVEQKYSDIEKSSISNFHES--N 249 +P + + TA T F+ AV D K + +SD++K+ +NF +S N Sbjct: 202 PVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKIDFSDLDKNK-ANFEKSSDN 260 Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 W+ + Y+AS +IP + + + Y+ I PG+S LF Sbjct: 261 GWVAMVQHYFASAWIPQQGAKRDIYAEKIDP--TLYRVGVKQPVAAIAPGQSADVQARLF 318 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 AG +E + P E++ D+GW IAKP+F L+ + VGN+G AI+L TV Sbjct: 319 AGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGYVGNWGWAIVLLTV 373 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT +NP G Sbjct: 374 LIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEKVNPFGG 432 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D PF+ Sbjct: 433 CLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRD-----------PFF------ 475 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 I P++M++SMF+Q ++P P D QA ++ +MP+ F FPAGL++Y+ +NV+S Sbjct: 476 --ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLS 533 Query: 550 IVQQAVIMKMHGA 562 I QQ I + G Sbjct: 534 IAQQYYITRKLGG 546 >gi|167582766|ref|ZP_02375640.1| putative inner membrane protein translocase component YidC [Burkholderia thailandensis TXDOH] Length = 557 Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 153/494 (30%), Positives = 241/494 (48%), Gaps = 50/494 (10%) Query: 80 GSINLKGAQFDDLNLR----GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 G I+ +G L L G D+S VTL + + Y A + + Sbjct: 93 GEIDTRGGTLAKLTLTKAGDGKQPDLS-----VTLFD-NAANHTYLARTGLLGG----DF 142 Query: 136 PNSNTVWNLISG--KILTPTTPIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSI 191 PN N V+ +G + +KL F++ + +T + VDT N + Sbjct: 143 PNHNDVYTQAAGPTSLAADQNTLKLAFESPVKGGVKVVKTYTFTRGSYVIGVDTKIEN-V 201 Query: 192 DQIRFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGDKSLVEQ-KYSDIEKSSISNFHES 248 +P + + T+ T F+ AV D+ ++ +SDI+K+ + Sbjct: 202 GTAPVTPSVYMELVRDNTSVETPMFSHTFLGPAVYTDQKHFQKITFSDIDKNKADYVTSA 261 Query: 249 -NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 N W+ + Y+AS +IP + + + Y+ I PG+S + Sbjct: 262 DNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPGQSADVSAR 319 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 LFAG +E + +A P E++ D+GW IAKP+F L+ + VGN+G AI+L Sbjct: 320 LFAGPEE----ERMLEGIA-PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLL 374 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT +NP Sbjct: 375 TLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEKVNPF 433 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 434 GGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFIL------------- 480 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ +NV Sbjct: 481 ------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNV 534 Query: 548 ISIVQQAVIMKMHG 561 +SI QQ I + G Sbjct: 535 LSIAQQYYITRTLG 548 >gi|167834935|ref|ZP_02461818.1| putative inner membrane protein translocase component YidC [Burkholderia thailandensis MSMB43] Length = 489 Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 151/499 (30%), Positives = 235/499 (47%), Gaps = 58/499 (11%) Query: 80 GSINLKGAQFDDLNLR----GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 G I+ +G L L G D+S VTL + + Y A + + Sbjct: 25 GEIDTRGGTLAKLTLTKAGDGKQPDLS-----VTLFD-NAANHTYLARTGLLGG----DF 74 Query: 136 PNSNTVWNLISGKI----------LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDT 185 PN N ++ ++G L+ +P+K K F R Y+ + Sbjct: 75 PNHNDIYAQVAGPTSLSAGQNALKLSFESPVKGGVKVVKTYTFTRG-----SYVIGVDTK 129 Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISN 244 + N + S ++R T F AV D+ ++ +SDI+K+ Sbjct: 130 IENVGTTPVTPSVYMELVRDNTSVETPMFSHTFLGPAVYTDQKHFQKITFSDIDKNKADY 189 Query: 245 FHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + N W+ + Y+AS +IP + + Y+ I PG+S Sbjct: 190 VPSADNGWIAMVQHYFASAWIPQAGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPGQSAD 247 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G A Sbjct: 248 VSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWA 302 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT Sbjct: 303 IVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEK 361 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 362 VNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFIL--------- 412 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 413 ----------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYV 462 Query: 544 WSNVISIVQQAVIMKMHGA 562 +NV+SI QQ I + G Sbjct: 463 VNNVLSIAQQYYITRTLGG 481 >gi|304414291|ref|ZP_07395659.1| Preprotein translocase subunit YidC [Candidatus Regiella insecticola LSR1] gi|304283505|gb|EFL91901.1| Preprotein translocase subunit YidC [Candidatus Regiella insecticola LSR1] Length = 542 Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 167/578 (28%), Positives = 279/578 (48%), Gaps = 65/578 (11%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + IAL + WQ + V NN + QT +Q S V + ++ Sbjct: 4 QRN---LLLIALLFVSFMIWQTWQVD------NNPPSSSQTAQQ------STDTVSMANQ 48 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A + ++++ L +IN +G + NL Y + S+ P L T A+ Sbjct: 49 TAADTQKQLIKVQTDVLSLTINTRGGDIEQANLLAYPNVLGSDKPFELL----ETTPAFI 104 Query: 122 AELDYVSTANNIELPNSNTVWNLISGK----ILTPTTP---IKLVFKNANNILFERTISL 174 + T N +N L + +L I L F + ++F +T L Sbjct: 105 YQAQSGLTGKNGPDNPANGARPLFTATQDHFVLAENQDELRIPLTFTSQEGVIFTKTFVL 164 Query: 175 DEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQ---TATNTFGVQEGFIAVLGDKS 228 + Y + V N + FS G++ + + PQ T ++ F +Q A Sbjct: 165 KRNDYAIGVHYQVKNTFATPLEFSLFGQLKQSINLPQYRDTGSSNFALQTYRGAAYSSDE 224 Query: 229 LVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 +KYS DIE+++++ + W+ + +Y+A+ +IP+ + + LS+G A Sbjct: 225 TKYKKYSFSDIEETNLNTVTQGG-WVAMLQQYFATAWIPAAQETHTFYSNKLSNGLAA-- 281 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 F + + I PG+ L+ G P I +A ++ +D+GW +FI++P+ Sbjct: 282 IGFKSMPVVIPPGEQKDLAATLWIG----PEIQDKMAAIAT-HLDLTVDYGWLWFISQPL 336 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + +GN+G +I++ T V+ + +PL K QY S A M+ IQPK+ E+RE+ Sbjct: 337 FKLLHFIQGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMIQPKLTEMRERIGDD 396 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + + M+ LYKT +NPL GC P+L+Q+P+F A+Y ++ S+E+RHA F WI DL+ Sbjct: 397 -KQRMSQEMMALYKTEQVNPLGGCLPLLIQMPIFLALYYMLMSSVELRHASFILWIHDLS 455 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A D P+Y I PI+M ++M+ KMSP D Q I+ +MPV Sbjct: 456 AQD-----------PYY--------ILPILMGITMYFIQKMSPTTITDPMQQKIMTFMPV 496 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +F FPAGL++Y+ SN+++I+QQ +I HG E Sbjct: 497 IFTVFFLWFPAGLVLYYIVSNLVTILQQYLI--YHGLE 532 >gi|260595827|ref|YP_003208398.1| membrane protein insertase [Cronobacter turicensis z3032] gi|260215004|emb|CBA26663.1| Inner membrane protein oxaA [Cronobacter turicensis z3032] Length = 549 Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 144/510 (28%), Positives = 247/510 (48%), Gaps = 58/510 (11%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 + +K L +IN +G + L Y ++ S+ P L T N + ++ Sbjct: 61 ITVKTDVLSLTINTRGGDIEQALLLAYPKELGSSEPFQLL---ETTPNFIYQAQSGLTGR 117 Query: 131 NNIELPNSNT----------VWNLISGK--ILTPTTPIKLVFKNANNILFERTISLDE-H 177 N + PN+N + L G+ +L P T F +A F +T +L Sbjct: 118 NGPDNPNNNQGRPLYNVERDTYVLADGQDELLIPMT-----FTDAAGNAFTKTFALKRGQ 172 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQTATNTFGVQ--EGFIAVLGDKSL 229 Y + V N + S G++ + H+ T +N F + G D+ Sbjct: 173 YAVYVGYDVKNAGTQPLEVSSFGQLKQTIDLPSHR-DTGSNNFALHTFRGAAYSTPDEKY 231 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + K+ I N + W+ + +Y+A+ ++P+ + S F GH + Sbjct: 232 EKYKFDTIADDENLNVNAKGGWVAMLQQYFATAWVPASNVT--SNFYTADLGHGVAAIGY 289 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P+F L Sbjct: 290 KSEPVQVQPGQTAKLASTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQPLFKL 344 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + ++ +GN+G +I+ T V+ + +PL K QY S A M+ +QPKI +RE+ Q Sbjct: 345 LKWIHSFLGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKIQAMRERLGDD-KQ 403 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 404 RMSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 463 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P+Y I PI+M +MF KMSP D Q I+ +MPV+F Sbjct: 464 -----------PYY--------ILPILMGATMFFIQKMSPTTVTDPMQQKIMTFMPVIFT 504 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 505 VFFLWFPSGLVLYYIVSNLVTILQQQLIYR 534 >gi|53724898|ref|YP_104854.1| inner membrane protein translocase component YidC [Burkholderia mallei ATCC 23344] gi|67639597|ref|ZP_00438442.1| inner membrane protein, 60 kDa [Burkholderia mallei GB8 horse 4] gi|121600195|ref|YP_994138.1| putative inner membrane protein translocase component YidC [Burkholderia mallei SAVP1] gi|124386283|ref|YP_001028205.1| putative inner membrane protein translocase component YidC [Burkholderia mallei NCTC 10229] gi|126451415|ref|YP_001083056.1| putative inner membrane protein translocase component YidC [Burkholderia mallei NCTC 10247] gi|167001176|ref|ZP_02266975.1| membrane protein OxaA [Burkholderia mallei PRL-20] gi|254174811|ref|ZP_04881472.1| inner membrane protein, 60 kDa [Burkholderia mallei ATCC 10399] gi|254201964|ref|ZP_04908328.1| membrane protein OxaA [Burkholderia mallei FMH] gi|254207296|ref|ZP_04913647.1| membrane protein OxaA [Burkholderia mallei JHU] gi|254359605|ref|ZP_04975876.1| membrane protein OxaA [Burkholderia mallei 2002721280] gi|81684886|sp|Q62EM4|OXAA_BURMA RecName: Full=Inner membrane protein oxaA gi|166975852|sp|A3MS20|OXAA_BURM7 RecName: Full=Inner membrane protein oxaA gi|166975853|sp|A2S8D6|OXAA_BURM9 RecName: Full=Inner membrane protein oxaA gi|166975854|sp|A1V7D5|OXAA_BURMS RecName: Full=Inner membrane protein oxaA gi|52428321|gb|AAU48914.1| inner membrane protein, 60 kDa [Burkholderia mallei ATCC 23344] gi|121229005|gb|ABM51523.1| inner membrane protein, 60 kDa [Burkholderia mallei SAVP1] gi|124294303|gb|ABN03572.1| inner membrane protein, 60 kDa [Burkholderia mallei NCTC 10229] gi|126244285|gb|ABO07378.1| inner membrane protein, 60 kDa [Burkholderia mallei NCTC 10247] gi|147747858|gb|EDK54934.1| membrane protein OxaA [Burkholderia mallei FMH] gi|147752838|gb|EDK59904.1| membrane protein OxaA [Burkholderia mallei JHU] gi|148028819|gb|EDK86751.1| membrane protein OxaA [Burkholderia mallei 2002721280] gi|160695856|gb|EDP85826.1| inner membrane protein, 60 kDa [Burkholderia mallei ATCC 10399] gi|238520165|gb|EEP83627.1| inner membrane protein, 60 kDa [Burkholderia mallei GB8 horse 4] gi|243063003|gb|EES45189.1| membrane protein OxaA [Burkholderia mallei PRL-20] Length = 558 Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 152/499 (30%), Positives = 233/499 (46%), Gaps = 58/499 (11%) Query: 80 GSINLKGAQFDDLNLR----GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 G I+ +G L L G D+S VTL + Y A + + Sbjct: 94 GEIDTRGGTLAKLTLTKAGDGKQPDLS-----VTLFD-HTANHTYLARTGLLGG----DF 143 Query: 136 PNSNTVWNLISGKI----------LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDT 185 PN N V+ ++G L+ +P+K K F R Y+ + Sbjct: 144 PNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRG-----SYVIGVDTK 198 Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISN 244 + N + S ++R T F AV D+ ++ + DI+K+ Sbjct: 199 IENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKADY 258 Query: 245 FHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + N W+ + Y+AS +IP + + R K I PG+S Sbjct: 259 VTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDPTLYRVGVKQPVEAIA--PGQSAD 316 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G A Sbjct: 317 VSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWA 371 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT Sbjct: 372 IVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEK 430 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 431 VNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFIL--------- 481 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 482 ----------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYV 531 Query: 544 WSNVISIVQQAVIMKMHGA 562 +NV+SI QQ I + G Sbjct: 532 VNNVLSIAQQYYITRTLGG 550 >gi|171316349|ref|ZP_02905569.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria MEX-5] gi|171098478|gb|EDT43280.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria MEX-5] Length = 554 Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 153/493 (31%), Positives = 242/493 (49%), Gaps = 45/493 (9%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D +TL + Y A + + PN N Sbjct: 91 GEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFD-HTAGHTYLARTGLLGG----DFPNHN 144 Query: 140 TVWNLISGKILTPT---TPIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSIDQI 194 V+ ++ + T +KL F++ + +T + VDT +N + Sbjct: 145 DVYTQVNAGPTSLTGDQNALKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDN-VGTA 203 Query: 195 RFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGD-KSLVEQKYSDIEKSSISNFHES--N 249 +P + + TA T F+ AV D K + +SD++K+ +NF ++ N Sbjct: 204 PVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKIDFSDLDKNK-ANFEKAADN 262 Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 W+ + Y+AS +IP + + + Y+ I PG+S LF Sbjct: 263 GWVAMVQHYFASAWIPQQGAKRDIYAEKIDP--TLYRVGVKQPVAAIAPGQSADVQARLF 320 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 AG +E + P E++ D+GW IAKP+F L+ ++ VGN+G AI+L TV Sbjct: 321 AGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGWAIVLLTV 375 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT +NP G Sbjct: 376 LIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEKVNPFGG 434 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D PF+ Sbjct: 435 CLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRD-----------PFF------ 477 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 I P++M++SMF+Q ++P P D QA ++ +MP+ F FPAGL++Y+ +NV+S Sbjct: 478 --ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLS 535 Query: 550 IVQQAVIMKMHGA 562 I QQ I + G Sbjct: 536 IAQQYYITRKLGG 548 >gi|167843727|ref|ZP_02469235.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei B7210] Length = 499 Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 151/499 (30%), Positives = 233/499 (46%), Gaps = 58/499 (11%) Query: 80 GSINLKGAQFDDLNLR----GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 G I+ +G L L G D+S VTL + Y A + + Sbjct: 35 GEIDTRGGTLAKLTLTKAGDGKQPDLS-----VTLFD-HTANHTYLARTGLLGG----DF 84 Query: 136 PNSNTVWNLISGKI----------LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDT 185 PN N V+ ++G L+ +P+K K F R Y+ + Sbjct: 85 PNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRG-----SYVIGVDTK 139 Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISN 244 + N + S ++R T F AV D+ ++ + DI+K+ Sbjct: 140 IENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKADY 199 Query: 245 FHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + N W+ + Y+AS +IP + + Y+ I PG+S Sbjct: 200 VTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPGQSAD 257 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G A Sbjct: 258 VSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWA 312 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT Sbjct: 313 IVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEK 371 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 372 VNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFIL--------- 422 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 423 ----------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYV 472 Query: 544 WSNVISIVQQAVIMKMHGA 562 +NV+SI QQ I + G Sbjct: 473 VNNVLSIAQQYYITRTLGG 491 >gi|307731536|ref|YP_003908760.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Burkholderia sp. CCGE1003] gi|307586071|gb|ADN59469.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Burkholderia sp. CCGE1003] Length = 552 Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 151/497 (30%), Positives = 242/497 (48%), Gaps = 55/497 (11%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L+L D ++TL + + Y A + + PN N Sbjct: 89 GEIDTRGGTLSKLSLVK-EGDGKQPDLVITLFDRTGN-HTYLARTGLLGG----DFPNHN 142 Query: 140 TVWNLISGK-----------ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN 188 V+ L+ + L+ +P+K K F R Y+ + + N Sbjct: 143 DVYTLMPNQQTDLKGDQKSFSLSFESPVKGGLKVIKTYTFTRG-----SYVIGVDTKIQN 197 Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGDKSLVEQ-KYSDIEKSSISNF 245 + S ++R T F FI AV D+ ++ + DI+K+ Sbjct: 198 VGTTPVSPSVYMELVRDDQPVETPRF--SHTFIGPAVYTDQHHFQKMTFGDIDKNKEDYA 255 Query: 246 HES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 ++ N W+ + Y+AS +IP + + + A Y+ I PG+++ Sbjct: 256 KQADNGWIAMVQHYFASAWIPQQGVKRDIYVEKIDP--ALYRVGVKQPVAAIAPGQTVDV 313 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 + LFAG +E + +A P E++ D+GW IAKP+F L+ ++ VGN+G AI Sbjct: 314 SARLFAGPEE----ERMLEGIA-PGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGWAI 368 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 +L T+ +K +FFPL+ Y S A MK I P++ LRE+FK PQ + A+++LYKT + Sbjct: 369 VLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGD-PQKMNAALMELYKTEKV 427 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 428 NPFGGCLPVVVQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQDPYFIL---------- 477 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 478 ---------PVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVV 528 Query: 545 SNVISIVQQAVIMKMHG 561 +NV+SI QQ I +M G Sbjct: 529 NNVLSIAQQYYITRMMG 545 >gi|167908935|ref|ZP_02496026.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 112] Length = 486 Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 151/499 (30%), Positives = 233/499 (46%), Gaps = 58/499 (11%) Query: 80 GSINLKGAQFDDLNLR----GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 G I+ +G L L G D+S VTL + Y A + + Sbjct: 22 GEIDTRGGTLAKLTLTKAGDGKQPDLS-----VTLFD-HTANHTYLARTGLLGG----DF 71 Query: 136 PNSNTVWNLISGKI----------LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDT 185 PN N V+ ++G L+ +P+K K F R Y+ + Sbjct: 72 PNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRG-----SYVIGVDTK 126 Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISN 244 + N + S ++R T F AV D+ ++ + DI+K+ Sbjct: 127 IENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKADY 186 Query: 245 FHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + N W+ + Y+AS +IP + + Y+ I PG+S Sbjct: 187 VTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPGQSAD 244 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G A Sbjct: 245 VSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWA 299 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT Sbjct: 300 IVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEK 358 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 359 VNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFIL--------- 409 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 410 ----------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYV 459 Query: 544 WSNVISIVQQAVIMKMHGA 562 +NV+SI QQ I + G Sbjct: 460 VNNVLSIAQQYYITRTLGG 478 >gi|167822122|ref|ZP_02453593.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 9] Length = 492 Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 151/499 (30%), Positives = 233/499 (46%), Gaps = 58/499 (11%) Query: 80 GSINLKGAQFDDLNLR----GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 G I+ +G L L G D+S VTL + Y A + + Sbjct: 28 GEIDTRGGTLAKLTLTKAGDGKQPDLS-----VTLFD-HTANHTYLARTGLLGG----DF 77 Query: 136 PNSNTVWNLISGKI----------LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDT 185 PN N V+ ++G L+ +P+K K F R Y+ + Sbjct: 78 PNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRG-----SYVIGVDTK 132 Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISN 244 + N + S ++R T F AV D+ ++ + DI+K+ Sbjct: 133 IENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKADY 192 Query: 245 FHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + N W+ + Y+AS +IP + + Y+ I PG+S Sbjct: 193 VTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPGQSAD 250 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G A Sbjct: 251 VSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWA 305 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT Sbjct: 306 IVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEK 364 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 365 VNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFIL--------- 415 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 416 ----------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYV 465 Query: 544 WSNVISIVQQAVIMKMHGA 562 +NV+SI QQ I + G Sbjct: 466 VNNVLSIAQQYYITRTLGG 484 >gi|167736503|ref|ZP_02409277.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 14] Length = 496 Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 151/499 (30%), Positives = 233/499 (46%), Gaps = 58/499 (11%) Query: 80 GSINLKGAQFDDLNLR----GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 G I+ +G L L G D+S VTL + Y A + + Sbjct: 32 GEIDTRGGTLAKLTLTKAGDGKQPDLS-----VTLFD-HTANHTYLARTGLLGG----DF 81 Query: 136 PNSNTVWNLISGKI----------LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDT 185 PN N V+ ++G L+ +P+K K F R Y+ + Sbjct: 82 PNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRG-----SYVIGVDTK 136 Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISN 244 + N + S ++R T F AV D+ ++ + DI+K+ Sbjct: 137 IENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKADY 196 Query: 245 FHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + N W+ + Y+AS +IP + + Y+ I PG+S Sbjct: 197 VTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPGQSAD 254 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G A Sbjct: 255 VSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWA 309 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT Sbjct: 310 IVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEK 368 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 369 VNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFIL--------- 419 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 420 ----------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYV 469 Query: 544 WSNVISIVQQAVIMKMHGA 562 +NV+SI QQ I + G Sbjct: 470 VNNVLSIAQQYYITRTLGG 488 >gi|325275325|ref|ZP_08141278.1| membrane protein insertase [Pseudomonas sp. TJI-51] gi|324099573|gb|EGB97466.1| membrane protein insertase [Pseudomonas sp. TJI-51] Length = 560 Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 128/365 (35%), Positives = 202/365 (55%), Gaps = 31/365 (8%) Query: 196 FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEKSSISNFHESNSWLG 253 F+ R P ++T T G A L S +K S D++K ++ + S W+ Sbjct: 214 FAQLKRDASGDPSSSTAT-GTATYLGAALWTASEPYKKVSMKDMDKGNLKE-NVSGGWVA 271 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 Y+ + +IP+K + Q + D Y ++ + + G + T+ L+AG Sbjct: 272 WLQHYFVTAWIPAKSDNNVVQTR--KDSQGNYIIGYTGPALNVPAGGKVETSAMLYAG-- 327 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 P I K+L+ P E+ +D+G+ +FIA+P+F L+ + ++L+GN+G +I++ T+ +K Sbjct: 328 --PKIQSKLKELS-PGLELTVDYGFLWFIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKG 384 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 LFFPL+ Y S A M+ + PK+ L+E+F Q + +AM++LYK INPL GC PI Sbjct: 385 LFFPLSAASYRSMARMRAVAPKLAALKERFGDD-RQKMSQAMMELYKKEKINPLGGCLPI 443 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+PVF A+Y V+ S+EMR AP+ WI DL+ D PF+ I Sbjct: 444 LVQMPVFLALYWVLLESVEMRQAPWMLWITDLSIKD-----------PFF--------IL 484 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 PIIM +MFIQ +++P P D QA ++ MP++F F FPAGL++YW +N +SI QQ Sbjct: 485 PIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQ 544 Query: 554 AVIMK 558 I + Sbjct: 545 WYITR 549 >gi|229593497|ref|YP_002875616.1| putative inner membrane protein translocase component YidC [Pseudomonas fluorescens SBW25] gi|259515713|sp|C3K1G2|OXAA_PSEFS RecName: Full=Inner membrane protein oxaA gi|229365363|emb|CAY53750.1| putative inner membrane protein [Pseudomonas fluorescens SBW25] Length = 560 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 119/323 (36%), Positives = 186/323 (57%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K S+ + W+ Y+ + +IP+K + Q + D Y F+ +T Sbjct: 255 DIDKGSLKETVQGG-WVAWLQHYFVTAWIPNKGDANLVQTR--KDSQGNYIIGFTGPALT 311 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG T+ L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + ++ Sbjct: 312 VAPGAKAETSATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHS 366 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +VGN+G +I+ T+ +K +FFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 367 IVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAALKEQHGDDR-QKMSQAM 425 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR APF WI DL+ D Sbjct: 426 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFMLWITDLSIKD------ 479 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 PF+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 480 -----PFF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 526 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +NV+SI QQ I + Sbjct: 527 AGLVLYWVVNNVLSISQQWYITR 549 >gi|126439633|ref|YP_001057148.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 668] gi|166975856|sp|A3N477|OXAA_BURP6 RecName: Full=Inner membrane protein oxaA gi|126219126|gb|ABN82632.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 668] Length = 558 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 151/499 (30%), Positives = 233/499 (46%), Gaps = 58/499 (11%) Query: 80 GSINLKGAQFDDLNLR----GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 G I+ +G L L G D+S VTL + Y A + + Sbjct: 94 GEIDTRGGTLAKLTLTKAGDGKQPDLS-----VTLFD-HTANHTYLARTGLLGG----DF 143 Query: 136 PNSNTVWNLISGKI----------LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDT 185 PN N V+ ++G L+ +P+K K F R Y+ + Sbjct: 144 PNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRG-----SYVIGVDTK 198 Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISN 244 + N + S ++R T F AV D+ ++ + DI+K+ Sbjct: 199 IENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKADY 258 Query: 245 FHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + N W+ + Y+AS +IP + + Y+ I PG+S Sbjct: 259 VTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPGQSAD 316 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G A Sbjct: 317 VSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWA 371 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT Sbjct: 372 IVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEK 430 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 431 VNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFIL--------- 481 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 482 ----------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYV 531 Query: 544 WSNVISIVQQAVIMKMHGA 562 +NV+SI QQ I + G Sbjct: 532 VNNVLSIAQQYYITRTLGG 550 >gi|53717718|ref|YP_106704.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei K96243] gi|76811170|ref|YP_331720.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 1710b] gi|126453447|ref|YP_001064392.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 1106a] gi|167813580|ref|ZP_02445260.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 91] gi|167892205|ref|ZP_02479607.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 7894] gi|167900716|ref|ZP_02487921.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei NCTC 13177] gi|167916975|ref|ZP_02504066.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei BCC215] gi|217423939|ref|ZP_03455439.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 576] gi|226193291|ref|ZP_03788901.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei Pakistan 9] gi|237810283|ref|YP_002894734.1| inner membrane protein OxaA [Burkholderia pseudomallei MSHR346] gi|242316035|ref|ZP_04815051.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 1106b] gi|254184152|ref|ZP_04890743.1| membrane protein OxaA [Burkholderia pseudomallei 1655] gi|254186623|ref|ZP_04893140.1| membrane protein OxaA [Burkholderia pseudomallei Pasteur 52237] gi|254194722|ref|ZP_04901153.1| membrane protein OxaA [Burkholderia pseudomallei S13] gi|254262072|ref|ZP_04953126.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 1710a] gi|254298582|ref|ZP_04966033.1| membrane protein OxaA [Burkholderia pseudomallei 406e] gi|81690513|sp|Q63YW1|OXAA_BURPS RecName: Full=Inner membrane protein oxaA gi|123600731|sp|Q3JXI3|OXAA_BURP1 RecName: Full=Inner membrane protein oxaA gi|166975855|sp|A3NPX1|OXAA_BURP0 RecName: Full=Inner membrane protein oxaA gi|52208132|emb|CAH34062.1| putative membrane protein [Burkholderia pseudomallei K96243] gi|76580623|gb|ABA50098.1| inner membrane protein, 60 kDa [Burkholderia pseudomallei 1710b] gi|126227089|gb|ABN90629.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 1106a] gi|157808712|gb|EDO85882.1| membrane protein OxaA [Burkholderia pseudomallei 406e] gi|157934308|gb|EDO89978.1| membrane protein OxaA [Burkholderia pseudomallei Pasteur 52237] gi|169651472|gb|EDS84165.1| membrane protein OxaA [Burkholderia pseudomallei S13] gi|184214684|gb|EDU11727.1| membrane protein OxaA [Burkholderia pseudomallei 1655] gi|217393002|gb|EEC33024.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 576] gi|225934891|gb|EEH30868.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei Pakistan 9] gi|237503961|gb|ACQ96279.1| inner membrane protein OxaA [Burkholderia pseudomallei MSHR346] gi|242139274|gb|EES25676.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 1106b] gi|254220761|gb|EET10145.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 1710a] Length = 558 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 151/499 (30%), Positives = 233/499 (46%), Gaps = 58/499 (11%) Query: 80 GSINLKGAQFDDLNLR----GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 G I+ +G L L G D+S VTL + Y A + + Sbjct: 94 GEIDTRGGTLAKLTLTKAGDGKQPDLS-----VTLFD-HTANHTYLARTGLLGG----DF 143 Query: 136 PNSNTVWNLISGKI----------LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDT 185 PN N V+ ++G L+ +P+K K F R Y+ + Sbjct: 144 PNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRG-----SYVIGVDTK 198 Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISN 244 + N + S ++R T F AV D+ ++ + DI+K+ Sbjct: 199 IENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKADY 258 Query: 245 FHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + N W+ + Y+AS +IP + + Y+ I PG+S Sbjct: 259 VTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPGQSAD 316 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G A Sbjct: 317 VSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWA 371 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT Sbjct: 372 IVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEK 430 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 431 VNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFIL--------- 481 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 482 ----------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYV 531 Query: 544 WSNVISIVQQAVIMKMHGA 562 +NV+SI QQ I + G Sbjct: 532 VNNVLSIAQQYYITRTLGG 550 >gi|325519717|gb|EGC99037.1| membrane protein insertase [Burkholderia sp. TJI49] Length = 553 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 154/492 (31%), Positives = 239/492 (48%), Gaps = 43/492 (8%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D +TL + Y A S + PN N Sbjct: 90 GEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFD-HTAGHTYLAR----SGLLGGDFPNHN 143 Query: 140 TVWNLISGKILTPT---TPIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSIDQI 194 V+ +S + T +KL F++ + +T + VDT +N + Sbjct: 144 DVYTQVSTGPTSLTGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDN-VGTA 202 Query: 195 RFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGD-KSLVEQKYSDIEKSSISNFHES-NS 250 +P + + TA T F+ AV D K + +SD++K+ + N Sbjct: 203 PVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKINFSDLDKNKADYVTSADNG 262 Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W+ + Y+AS +IP + + + + Y+ I PG+S LFA Sbjct: 263 WVAMVQHYFASAWIPQQGVKRDIYAEKIDP--SLYRVGVKQPVAAIAPGQSADVQARLFA 320 Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 G +E + P E++ D+GW IAKP+F L+ + LVGN+G AI+L TV Sbjct: 321 GPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGLVGNWGWAIVLLTVL 375 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT +NP GC Sbjct: 376 IKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEKVNPFGGC 434 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D PF+ Sbjct: 435 LPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRD-----------PFF------- 476 Query: 491 GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 I P++M++SMF+Q ++P P D QA ++ +MP+ F FPAGL++Y+ +NV+SI Sbjct: 477 -ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSI 535 Query: 551 VQQAVIMKMHGA 562 QQ I + G Sbjct: 536 AQQYYITRKLGG 547 >gi|323527919|ref|YP_004230072.1| membrane protein insertase, YidC/Oxa1 family domain containing [Burkholderia sp. CCGE1001] gi|323384921|gb|ADX57012.1| membrane protein insertase, YidC/Oxa1 family domain containing [Burkholderia sp. CCGE1001] Length = 552 Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 151/497 (30%), Positives = 242/497 (48%), Gaps = 55/497 (11%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L+L D ++TL + + Y A + + PN N Sbjct: 89 GEIDTRGGTLSKLSLVK-QGDGKQPDLVITLFDRTGN-HTYLARTGLLGG----DFPNHN 142 Query: 140 TVWNLISGK-----------ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN 188 V+ L+ + L+ +P+K K F R Y+ + + N Sbjct: 143 DVYTLMPNQQTELKGDQKSFSLSFESPVKGGVKVIKTYTFTRG-----SYVIGVDTKIQN 197 Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGDKSLVEQ-KYSDIEKSSISNF 245 + S ++R T F FI AV D+ ++ + DI+K+ Sbjct: 198 VGTAPVSPSVYMELVRDDQPVETPRF--SHTFIGPAVYTDQHHFQKMTFGDIDKNKEDYA 255 Query: 246 HES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 ++ N W+ + Y+AS +IP + + + A Y+ I PG+++ Sbjct: 256 KQADNGWIAMVQHYFASAWIPQQGVKRDIYVEKIDP--ALYRVGVKEPVAAIAPGQTVDV 313 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 + LFAG +E + +A P E++ D+GW IAKP+F L+ ++ VGN+G AI Sbjct: 314 SARLFAGPEE----ERMLEGIA-PGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGWAI 368 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 +L T+ +K +FFPL+ Y S A MK I P++ LRE+FK PQ + A+++LYKT + Sbjct: 369 VLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGD-PQKMNAALMELYKTEKV 427 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 428 NPFGGCLPVVVQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQDPYFIL---------- 477 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 478 ---------PVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVV 528 Query: 545 SNVISIVQQAVIMKMHG 561 +NV+SI QQ I +M G Sbjct: 529 NNVLSIAQQYYITRMMG 545 >gi|152983547|ref|YP_001351680.1| putative inner membrane protein translocase component YidC [Pseudomonas aeruginosa PA7] gi|166975880|sp|A6VF45|OXAA_PSEA7 RecName: Full=Inner membrane protein oxaA gi|150958705|gb|ABR80730.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 578 Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 117/325 (36%), Positives = 184/325 (56%), Gaps = 32/325 (9%) Query: 236 DIEKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D++K F ES W+ Y+ + ++P+K Q DG Y F+ Sbjct: 275 DMDKE---QFKESVQGGWVAWLQHYFVTAWVPTKGE--QHQVMTRKDGQGNYIVGFTGPT 329 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 +++ G + T L+AG P + + K+L+ P E+ +D+G+ +FIA+P+F L+ + Sbjct: 330 LSVPAGGKVETDLTLYAG----PKLQKHLKELS-PGLELTVDYGFLWFIAQPIFWLLQHI 384 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 ++L+GN+G +I+ TV +KL FFPL+ Y S A M+ + PK+ ++E+ Q + + Sbjct: 385 HSLIGNWGWSIIALTVLIKLAFFPLSAASYRSMARMRAVSPKMQAIKEQHGDDR-QKMSQ 443 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ GWI DL+ D Sbjct: 444 AMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWLGWITDLSVKD---- 499 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 PF+ I PI+M +M IQ ++P P D QA ++ MP++F F Sbjct: 500 -------PFF--------ILPIVMGGTMLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLW 544 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +NV+SI QQ I + Sbjct: 545 FPAGLVLYWVVNNVLSIAQQWYITR 569 >gi|153873748|ref|ZP_02002226.1| 60Kd inner membrane protein [Beggiatoa sp. PS] gi|152069784|gb|EDN67772.1| 60Kd inner membrane protein [Beggiatoa sp. PS] Length = 495 Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 135/408 (33%), Positives = 214/408 (52%), Gaps = 31/408 (7%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 IKL ++N I + + Y+ + V N S++ G+ R + + F Sbjct: 103 IKLHWQNDKGIKVTKIYTFHRGSYVIDVKYLVDNQSVEPWAGQLYGQFQRTQADLGGSRF 162 Query: 215 GVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHE---SNSWLGISDKYWASVFIPSKETS 270 A+ ++L E+ + DIE SS + + + W+ + Y+ S ++P E Sbjct: 163 IYTYMGGAISSPETLYEKIPFDDIEDSSFNQENRPAWAEGWIAMLQHYFVSAWVPKPEQI 222 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 K L DG+ RY F + + PG LF G P + + +LA P Sbjct: 223 HKYYTKMLKDGN-RYVLGFYGPKQVVAPGTQEIFNIALFVG----PKLQNKLLELA-PGL 276 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ +D+GW +FIA+P+F ++ + ++ GN+G +I+L T+ +KL FF L+ Y S ANM+ Sbjct: 277 DLTVDYGWLWFIAQPLFWVLDWLHDWTGNWGWSIILLTIMIKLAFFHLSATSYKSMANMR 336 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QP++ L+E+F + L +AM++LYK INPL GC PIL+QIPVF A+Y V+ S Sbjct: 337 RLQPRMITLKERFGDDKTK-LNQAMMELYKKEKINPLGGCLPILVQIPVFIALYWVLLES 395 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+R A F WIKDL++ DP F L P+IM +M +Q ++P Sbjct: 396 VELRQADFMWWIKDLSSPDP--FFVL-----------------PLIMGATMLVQHFLNPA 436 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P D Q ++ +P+VF + FPAGL++YW +NV+SI QQ VI K Sbjct: 437 PIDPIQQKMMMMLPIVFTVFFAFFPAGLVLYWVANNVLSITQQWVITK 484 >gi|319940691|ref|ZP_08015033.1| inner membrane protein oxaA [Sutterella wadsworthensis 3_1_45B] gi|319805842|gb|EFW02609.1| inner membrane protein oxaA [Sutterella wadsworthensis 3_1_45B] Length = 565 Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 134/443 (30%), Positives = 226/443 (51%), Gaps = 39/443 (8%) Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKI-LTPTTPIKLVFK-NANNILFERTISLD 175 +AY A+ V + P N + L+S + L +K+VF+ + + +T + Sbjct: 137 HAYLAQTGLVGG----DYPTHNDEFKLVSQDLALGDKESMKVVFEADKGGLKVTKTFTFK 192 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPR--GRIMRH--KPQTATNTFGVQEGFIAVLGDKSLVE 231 Y VDT N+ D+ +P+ ++ R KP ++ + G +++ + Sbjct: 193 RGYYGIDVDTAVTNTTDKA-VTPQIYYQLTRDSSKPAGESSMYSTFTGPAFYTDEENFQK 251 Query: 232 QKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 +S+I ++N WL + ++ S ++P + H+ + L GH + Sbjct: 252 LSFSEIRDKDAKYVEDTNNGWLAMVQHHFVSAWVPPQGEVRHNYTRAL--GHDLFAVGTL 309 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I PG + T L++G +E + P E+++D+GW F+AKP++ L+ Sbjct: 310 ISLKEIAPGATQTNHAVLYSGPQEQARLEQLA-----PGLELVVDYGWLTFLAKPIYWLL 364 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + Y +VGN+G AI+L T VK + +P++ Y S A MK + P++ L+EK+K Q Sbjct: 365 DFLYGIVGNWGWAIVLLTCIVKAVLYPISAAGYRSMARMKEVTPRLKALQEKYKDD-KQR 423 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 L +AM++LYKT INP+ GC PI+LQIPVF A+Y V+ S+E+R A + W+ DLA DP Sbjct: 424 LNQAMMELYKTEKINPVGGCLPIMLQIPVFLALYWVLQGSVELRGAEWILWVHDLAMPDP 483 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 + P +M+ +MF+Q+ ++P P D QA ++ MPVVF Sbjct: 484 WFVL-------------------PALMAATMFLQILLNPKPTDPMQAKVMYIMPVVFSVM 524 Query: 531 LSSFPAGLIIYWSWSNVISIVQQ 553 F AGL++YW +N++SI QQ Sbjct: 525 FFIFAAGLVLYWLTNNILSIAQQ 547 >gi|238028969|ref|YP_002913200.1| putative inner membrane protein translocase component YidC [Burkholderia glumae BGR1] gi|237878163|gb|ACR30496.1| Putative inner membrane protein translocase component YidC [Burkholderia glumae BGR1] Length = 553 Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 152/489 (31%), Positives = 238/489 (48%), Gaps = 40/489 (8%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D VTL +TK+ + V+ N PN N Sbjct: 92 GEIDTRGGTLTKLTLKK-EGDGKQPDLFVTLFD--HTKDHTYLARTGVTGGN---FPNHN 145 Query: 140 TVWNLISG--KILTPTTPIKLVFKN--ANNILFERTISLDEHYLFKIVDT-VTNNSIDQI 194 ++ +SG + +KL F++ + +T + VDT + N + Sbjct: 146 DLFTPLSGPRSLAAGQDTLKLSFESQEKGGVKVVKTYTFTRGSYVIGVDTKIENVGTAPV 205 Query: 195 RFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHES-NSWL 252 + I+R T F AV D+ ++ +SDI+K+ + N W+ Sbjct: 206 TPTVYMEIVRDSTPVETPLFSHTFLGPAVYTDQKHFQKITFSDIDKNKAEYVTSADNGWV 265 Query: 253 GISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 + Y+AS +IP + + R K TI PG+S + LFAG Sbjct: 266 AMVQHYFASAWIPQAGVKRDIYVEKIDPSLYRIGVKEPVK--TIEPGQSADVSARLFAGP 323 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 +E + P +++ D+GW IAKP+F L+ + VGN+G +I+L TV +K Sbjct: 324 EEERVLEGIA-----PGLDLVKDYGWVTIIAKPLFWLLQKIHGYVGNWGWSIVLLTVLIK 378 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 +FFPL+ Y S A MK I P++ +LRE+FK S PQ + A+++LYKT +NP GC P Sbjct: 379 AVFFPLSAASYKSMARMKEITPRMQQLRERFK-SDPQKMNAALMELYKTEKVNPFGGCLP 437 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 438 VVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFIL------------------ 479 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P++M+ SMF+Q +++P P D QA ++ +MP+ F FPAGL++Y+ +NV+SI Q Sbjct: 480 -PVLMAGSMFLQTRLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQ 538 Query: 553 QAVIMKMHG 561 Q I + G Sbjct: 539 QYYITRAIG 547 >gi|187479885|ref|YP_787910.1| putative inner membrane protein translocase component YidC [Bordetella avium 197N] gi|123513533|sp|Q2KTI5|OXAA_BORA1 RecName: Full=Inner membrane protein oxaA gi|115424472|emb|CAJ51026.1| inner-membrane protein insertion factor [Bordetella avium 197N] Length = 559 Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 115/326 (35%), Positives = 185/326 (56%), Gaps = 28/326 (8%) Query: 234 YSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 +SDI K+ S ++ N W+GI Y+A+ ++P + T + L +A + Sbjct: 251 FSDIAKNKASYIKQADNGWIGIVQHYFATAWVPKEGTPRTNDLLQLQPNLFAARAIEALG 310 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 E+ PG ++++ L+ G ++ P E+++D+GW IAKP+F LM++ Sbjct: 311 EVA--PGATVSSDAQLWVGPQD-----QQAMAAVAPGLELVVDYGWLTIIAKPLFTLMTW 363 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++L+GN+G I+ TV +K +F+PLA Y S A MK + P++ L+EK+ Q L Sbjct: 364 LHSLLGNWGWTIVALTVIIKAVFYPLASASYRSMARMKQVAPRLQALKEKYGDD-RQKLN 422 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 +AM+++Y+T INPL GC P+++QIPVF A+Y V+ S+EMR AP+ WI DL+ DP Sbjct: 423 QAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAPWILWIHDLSVRDPYF 482 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I P +M +MF+Q+K++P P D QA ++ MP+VF + Sbjct: 483 IL-------------------PAVMMATMFLQIKLNPTPPDPVQAKVMMVMPLVFGGMMF 523 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N +SI+QQ I + Sbjct: 524 FFPAGLVLYWCVNNTLSILQQWSITR 549 >gi|94501616|ref|ZP_01308133.1| putative inner membrane protein translocase component YidC [Oceanobacter sp. RED65] gi|94426299|gb|EAT11290.1| putative inner membrane protein translocase component YidC [Oceanobacter sp. RED65] Length = 538 Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 149/482 (30%), Positives = 238/482 (49%), Gaps = 48/482 (9%) Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPN------SNTVWNLISG 147 L+ Y L V LL SN + Y A+ V N I+ T +NL G Sbjct: 88 LKQYPLSVDQQDVPFVLLEQSNIRT-YIAQSGLVGK-NGIDKKGRAQYSVEKTEYNLADG 145 Query: 148 KILTPTTPIKLVFKNA-NNILFERTISLDE-HYLFKIVDTVTNNSID--QIRFSPRGRIM 203 + I++V NN+ E+ +++ YL + + N S + Q F + + Sbjct: 146 Q-----DQIQVVLATTQNNVKIEKVFTINRGEYLIDVGFRIDNQSQEPWQANFYAQFKRD 200 Query: 204 RHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWAS 261 R ++ + G+ G + + + DIE+ E W+ Y+ Sbjct: 201 RSVDPSSMESMGMASFLGAAVTRPSERYFKMDFDDIEEDPFKEKIEG-GWIAFLQHYFLG 259 Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 ++PSK+ + H + GH Y + + + + PG T+ L+ G K+ + Sbjct: 260 AWVPSKDEA-HVYNTRKASGH--YLVGYYDSALQVEPGTQGGTSTQLYLGPKDQDRLAEI 316 Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 + L ++ ID+GW +++A+P+F L+ +++ GN+G AI++ T+ VKL FFPL+ Sbjct: 317 AEHL-----DLTIDYGWLWWVAQPLFWLLQLMHDIAGNWGWAIIMLTILVKLAFFPLSAA 371 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Y S ANM+ + PK+ ++E++ + Q L K M+ LYK INPL GC PIL+Q+PVF Sbjct: 372 SYRSMANMRRVAPKLTAIKEQYADNREQ-LSKEMMNLYKKEKINPLGGCLPILVQMPVFI 430 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A+Y V+ S+E+R APF WI+DL+ DP I P+IM SM Sbjct: 431 ALYWVLMESVELRQAPFMLWIEDLSLKDPYFIL-------------------PLIMGASM 471 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F+QM+++P P D QA ++ MPVVF FPAGL++YW +N++SI QQ I + Sbjct: 472 FVQMQLNPTPPDPMQAKVMKLMPVVFTVFFLFFPAGLVLYWVVNNLLSIAQQYYITRKIE 531 Query: 562 AE 563 AE Sbjct: 532 AE 533 >gi|94263631|ref|ZP_01287440.1| 60 kDa inner membrane insertion protein [delta proteobacterium MLMS-1] gi|93455936|gb|EAT06091.1| 60 kDa inner membrane insertion protein [delta proteobacterium MLMS-1] Length = 559 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 169/575 (29%), Positives = 290/575 (50%), Gaps = 41/575 (7%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMN-------NERKNIQTVK----QPNQVDNS 52 N+ +AI LS+ I+ +Q F++ P E ER T +P D + Sbjct: 3 NYRALLAIVLSMAILLVYQFFFMPPPPESTAPEPEAPVAERATAPTAAPERPRPGTTDPT 62 Query: 53 YAAVLID-DRAQALSMSPRVELKNPSLIGS-INLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 A +D A + R + L + I+ G L+ + V +SP L Sbjct: 63 GAPAPVDVSSLLAQEVEGREIVVETDLYEAVISEAGGALRSFRLKEFRETVDPDSPAKEL 122 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL--- 167 + ++ N + + +L + + G+++ P + + A + L Sbjct: 123 VR-TDHDNGLPLRFSWGVEPHQADLLHYQSERQ---GRLVVPAGREQTLTLRAQSPLGLE 178 Query: 168 FERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG--VQEGFIAVL 224 F RT + D +L ++ + V N ++ +P + + + + +G +A++ Sbjct: 179 FIRTYTFRDSDHLLELREEVRNTGEVPLQGAPYLALTSRPFEAEDDPLKRFLFDGPVALV 238 Query: 225 GDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 D + E + D +E+ S +F SW G D Y+ + IP ++ + F + A Sbjct: 239 -DGEVHEVRPRDLVEERSGRSFTGEVSWAGYHDSYFLAAIIPREQGQATAHFSANREETA 297 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 SA E+ + PG++ + ++ G K+ ++ DL +++GWF F+A Sbjct: 298 T-TVLASAAEV-LNPGEARSYEYMVYYGPKKLAELNAIGYDLG-----RSVNFGWFDFLA 350 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +P F ++S+F+ +VGN+G+AI++ T+ +K+LF+PL K S M+ IQP++ +LREKF Sbjct: 351 RPAFYVLSFFHGMVGNYGLAIIMVTILIKILFWPLTHKGLKSMKVMQKIQPRMAKLREKF 410 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K Q Q+ M++LY+T+ +NPL GC P+LLQIPVFFA+YKV+ S+E+RHAPF WI Sbjct: 411 KDDK-QRQQQEMLKLYQTYKVNPLGGCLPMLLQIPVFFALYKVLLQSVELRHAPFMLWIN 469 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+A D I F +P + + ++M+ SMFIQ KM+ P AD QA I+ ++ Sbjct: 470 DLSAPDRLYIG-------FDIPWLGGIPVLTLLMAASMFIQQKMT-PIADPMQARIMLFL 521 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P+VF F +F +GL++YW +NV++I QQ I + Sbjct: 522 PLVFFFLFLNFASGLVLYWFINNVLTIAQQYTIYR 556 >gi|145590263|ref|YP_001156860.1| 60 kDa inner membrane insertion protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189036355|sp|A4T0N2|OXAA_POLSQ RecName: Full=Membrane protein oxaA gi|145048669|gb|ABP35296.1| protein translocase subunit yidC [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 557 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 152/506 (30%), Positives = 254/506 (50%), Gaps = 50/506 (9%) Query: 73 LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANN 132 L+N L I+ GA D L +++++ V + + T + Y A V+ N Sbjct: 84 LENELLSVEISAAGANVVDAKLLK---ELTADQKPVEIFQHTPT-HTYVARSGLVAVGNT 139 Query: 133 IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD----EHYLFKIVDTVTN 188 +LPN +++ L P ++ N + E+T L+ + Y+ V VT Sbjct: 140 -DLPNHTSLFKLDRSGKDGSGRPFLVLSSERNGVKLEKTFLLNPGSYDIYVGHRVTQVTP 198 Query: 189 NSIDQIRFSPRGRIMRH-KPQTATNTFG---VQEGFI--AVLGDKSLVEQ-KYSDIEKSS 241 N I ++ I+R + FG F A+ D ++ ++DIEK+ Sbjct: 199 NGAPLILYT---EIVRDGSEEKKIGPFGGAFSASTFTGPAIYTDGGKYKKVSFADIEKNK 255 Query: 242 ISNFHE----SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + W+ + Y+AS +IP + + + Y+ TI Sbjct: 256 FTAPSQIAAGQPGWVAMVQHYFASAWIPDDKLPRDIYSGKIDND--LYRVGMQTQLGTIA 313 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G ++ LF G +E + + P E+L D+G+ +AKP+F L+ + +N+V Sbjct: 314 TGTTVMANAQLFVGPQEERML-----ETIAPGLELLKDYGYLTILAKPIFWLLEHIHNIV 368 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G +I+L TV +KL FFPL+ Y S A MK +QP++ ++E++K PQ L +AM++ Sbjct: 369 GNWGWSIILLTVLIKLAFFPLSAASYKSMARMKEVQPRLAAMKEQYKGE-PQKLNQAMME 427 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 +Y+ INPL GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D Sbjct: 428 MYRKEKINPLGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSVPD-------- 479 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 P+Y I P++M++SMF+Q K++P P D QA ++ +MP+VF FPAG Sbjct: 480 ---PYY--------ILPVVMAVSMFVQTKLNPTPPDPVQAKVMMYMPIVFSIMFFFFPAG 528 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563 L++YW +N++SI QQ I ++ G + Sbjct: 529 LVLYWVTNNLLSIAQQWQINRLFGKK 554 >gi|37528712|ref|NP_932057.1| putative inner membrane protein translocase component YidC [Photorhabdus luminescens subsp. laumondii TTO1] gi|36788151|emb|CAE17278.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 546 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 156/574 (27%), Positives = 278/574 (48%), Gaps = 64/574 (11%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S ++ AW+ + N + +Q +Q + + AV + Sbjct: 4 QRNLLLIALLFVSFLVWQAWE--------ADKNPQPTTVQATQQTDMPSSENQAVPGSGK 55 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNAY 120 + ++ +K L +IN +G ++ +L Y + SN P L +P+ T A Sbjct: 56 GKLIT------VKTDVLSLTINTRGGDIEEADLLAYPDTLGSNQPFKLLETTPAFTYQAQ 109 Query: 121 --FAELDYVSTANNIELP---NSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 D N E P + + L G+ I + F N I++ +T L Sbjct: 110 SGLTGKDGPDNPMNSERPLYTAAQDSYVLADGQ---DELRIPMNFVTKNGIVYVKTFVLK 166 Query: 176 EHYLFKIVDTVTNNSIDQ-IRFSPRGRIM------RHKPQTATNTFGVQ--EGFIAVLGD 226 VD +N+ ++ ++ + G++ +H+ T ++ F + G D Sbjct: 167 RGEYAISVDYRIHNTTEKPLQMTFFGQLKQSVELPKHR-DTGSSNFALHTYRGAAYSSDD 225 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-SKETSFHSQFKYLSDGHARY 285 + +SDIE S+S W+ + +Y+A+ ++P + ETS F ++ G Sbjct: 226 TKYKKYSFSDIEGESLS-VTTKGGWIAMLQQYFATAWVPVANETS---TFYTVALGKEMA 281 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + I++ T ++ L+ G P I E P ++ +D+GW +FI++P Sbjct: 282 AIGYKSAPISVAANSEKTVSSTLWIG----PEIQD-EMAAVAPHLDLSVDYGWLWFISQP 336 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 337 LFKLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGD 396 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF GWI DL Sbjct: 397 DK-QRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFAGWIHDL 455 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I P++M ++MFI KMSP D Q I+ +MP Sbjct: 456 SAQD-----------PYY--------ILPLLMGVTMFIIQKMSPTTITDPMQQKIMTYMP 496 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 497 VIFTIFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 530 >gi|255320707|ref|ZP_05361884.1| inner membrane protein [Acinetobacter radioresistens SK82] gi|262380663|ref|ZP_06073816.1| membrane protein insertase, YidC/Oxa1 family protein [Acinetobacter radioresistens SH164] gi|255302323|gb|EET81563.1| inner membrane protein [Acinetobacter radioresistens SK82] gi|262297611|gb|EEY85527.1| membrane protein insertase, YidC/Oxa1 family protein [Acinetobacter radioresistens SH164] Length = 584 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 166/603 (27%), Positives = 283/603 (46%), Gaps = 90/603 (14%) Query: 3 RNWNYFVAIALSVIIVY----AWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 + W F + ++ Y AWQ Y + E +++ + + + + NS AA Sbjct: 2 QQWARFAILGAMFVVAYLLILAWQKDYGH---AETAPQQQAVVSHEVSADLPNSQAASAS 58 Query: 59 DDRAQALSMSPRV----ELKNPSLIGS--------INLKGAQFDDLNLRGYHLDVSSNSP 106 D QA +P+ N LI IN KG + L + + S+ P Sbjct: 59 SDVPQANIATPQATDVTAPVNQQLISVQTDLYHLLINPKGGDIVRIELLNHDKNKDSDQP 118 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSN-----------TVWNLI---------S 146 V L S+ K Y A+ + + P+SN T ++L+ + Sbjct: 119 FVML--ESDAKRTYVAQSGLIG----LNGPDSNRSGRPVYEVEKTSYDLLKDAQTVSKDN 172 Query: 147 GKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH 205 GK + T I +V+K A+ + +T + + Y + V N S + G+I R Sbjct: 173 GKAVKVLT-IPMVYKTADGVEIIKTFTFKQGEYPIVVNHKVVNRSQQNWQGQMFGQIKRD 231 Query: 206 ------KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYW 259 K T G G ++ + K+ + + N W+ + Y+ Sbjct: 232 NSEDPGKSDQGIFTLGTFLGGAWGTPEEHYNKLKFDNFNDEKL-NVDAKGGWIAVVQHYF 290 Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL---------PGKSITTTNFLFA 310 S +IP + + + + A+ +++ SA+++ I+ P ++ + F Sbjct: 291 VSAWIPGQLKLTQANGQPYA---AKLESRKSADDMNIISFTSPTINVPAGTVAEVDATFY 347 Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 P I KDLA+ +D+GW + IAK +F+ + +F+N+VGN+G +I+L T+ Sbjct: 348 SG---PKIQSELKDLAV-GLNQTVDYGWLWPIAKLLFLGLQFFHNIVGNWGWSIILLTIL 403 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 VKL+ +PL+ K Y S A M+ I P++ ++E+F + + Q+ M+ LYK +NPL+GC Sbjct: 404 VKLILWPLSSKSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQE-MMALYKREQVNPLSGC 462 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 P+LLQ+P+F A+Y V+ S+E+RHAP++GWI+DL+A DP I Sbjct: 463 LPLLLQMPIFLALYWVLMESVELRHAPWFGWIQDLSAMDPWFIL---------------- 506 Query: 491 GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 P++M L+MF Q ++P PAD QA + MP++F + FPAGL++YW +N I+I Sbjct: 507 ---PLVMGLTMFTQQSLNPQPADPMQAKVFKIMPIIFTIFMLFFPAGLVLYWIVNNSITI 563 Query: 551 VQQ 553 +QQ Sbjct: 564 LQQ 566 >gi|270264115|ref|ZP_06192382.1| putative inner membrane protein translocase component YidC [Serratia odorifera 4Rx13] gi|270041764|gb|EFA14861.1| putative inner membrane protein translocase component YidC [Serratia odorifera 4Rx13] Length = 545 Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 155/573 (27%), Positives = 263/573 (45%), Gaps = 62/573 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ-VDNSYAAVLIDD 60 +RN + +S +I AWQ + + + N T +Q V S LI Sbjct: 4 QRNLFLIALLFVSFMIWQAWQTDNAPQPVAQTTQQTSNTATGDAASQAVPASGQGKLITV 63 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 LS++ IN +G + L Y + S++P L NT + Sbjct: 64 NTDVLSLT-------------INTRGGDIEQAKLLAYPDTLGSSTPFQLL---ENTPSFV 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTP-------IKLVFKNANNILFERTIS 173 + ++ N + P +N L T P I L F + ++ +T Sbjct: 108 YQAQSGLTGRNGPDNP-ANGERPLFQAAQDNYTLPEGQDELRIPLTFTGKDGAVYTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGVQEGFIAVLGD 226 L HY + V N S + + G++ +H+ T +N F + A Sbjct: 167 LKRNHYAVGVDYNVDNKSTAPLELTLFGQLKQTTELPKHR-DTGSNNFALHTFRGAAYSS 225 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 QKY+ +K N W+ + +Y+A+ ++P+ + S + F G Sbjct: 226 SEDKYQKYA-FDKDENLNVTTQGGWVAMLQQYFATAWVPATQGS--NTFYTAKPGDNLST 282 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 F + + + PG L+ G P + LA P ++ +D+GW +FI++P+ Sbjct: 283 IGFKSTPVVVQPGAQQQLNATLWVG----PELQDQMAQLA-PHLDLTVDYGWLWFISQPL 337 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 338 FKLLKFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD 397 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+ Sbjct: 398 -KQRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLS 456 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A D P+Y I PI+M ++MF KMSP D Q I+ +MPV Sbjct: 457 AQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPV 497 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 498 IFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 530 >gi|259910298|ref|YP_002650654.1| putative inner membrane protein translocase component YidC [Erwinia pyrifoliae Ep1/96] gi|224965920|emb|CAX57453.1| Inner membrane protein OxaA [Erwinia pyrifoliae Ep1/96] gi|283480422|emb|CAY76338.1| Inner membrane protein yidC [Erwinia pyrifoliae DSM 12163] gi|310765879|gb|ADP10829.1| putative inner membrane protein translocase component YidC [Erwinia sp. Ejp617] Length = 548 Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 165/587 (28%), Positives = 265/587 (45%), Gaps = 87/587 (14%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S +I AWQ +N + +QT Q Q S A + Sbjct: 4 QRNLFLIAFLFVSFMIWQAWQT----------DNAPQPLQT--QTTQNTASAAGDAANQG 51 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS--------- 112 A + +K L +IN +G D L Y + S+ P + L S Sbjct: 52 VPASGQGKTITVKTDVLSLNINTRGGDIDQAQLLTYPDKLGSDQPFLLLESTPGFLYQAQ 111 Query: 113 --------PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 P N N A Y S+ ++ EL + + I L F N Sbjct: 112 SGLTGRNGPDNPANG--ARPLYTSSQDHFELADGQSELR------------IPLTFTAEN 157 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQ-IRFSPRGRIM------RHKPQTATNTFGVQ 217 + +T L VD NN+ Q + S G++ +H+ T ++ F + Sbjct: 158 GATYTKTFVLKRGEYAIGVDYQINNTTQQPLEVSMFGQLKQTIDLPKHR-DTGSSNFALH 216 Query: 218 EGFIAVLGDKSLVEQKY-----SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 A +KY SD E S + SN W+ + +Y+A+ ++P S Sbjct: 217 TFRGAAYSSSETNYEKYKFDTISDNENLSTTT---SNGWVAMLQQYFATAWVPQTAGSNT 273 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 L +G A + + +TI G L+ G P I +A P ++ Sbjct: 274 LYTSNLGNGIAAI--GYKSAPVTIAAGSQQQLAATLWVG----PEIQDRMAAVA-PHLDL 326 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +D+GW +FI++P+F L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ + Sbjct: 327 TVDYGWLWFISQPLFKLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRML 386 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPKI +RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E Sbjct: 387 QPKIQAMRERLGDD-KQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMGSVE 445 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511 +RHAPF WI DLAA D P+Y I PI+M ++MF KMSP Sbjct: 446 LRHAPFALWIHDLAAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTV 486 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 487 TDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|70733513|ref|YP_263288.1| putative inner membrane protein translocase component YidC [Pseudomonas fluorescens Pf-5] gi|123651831|sp|Q4K395|OXAA_PSEF5 RecName: Full=Inner membrane protein oxaA gi|68347812|gb|AAY95418.1| inner membrane protein, 60 kDa [Pseudomonas fluorescens Pf-5] Length = 566 Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 119/323 (36%), Positives = 184/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D K+ I+ + W+ Y+ + +IP K ++Q D Y ++ +T Sbjct: 261 DKSKAPITE-NVQGGWVAWLQHYFVTAWIPPKGE--NNQVLARKDSKGNYIIGYTGPSMT 317 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG T+ L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + ++ Sbjct: 318 VAPGAKAETSAILYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHS 372 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 LVGN+G +I+ T+ +K +FFPL+ Y S A M+ + PK+ L+EKF Q + +AM Sbjct: 373 LVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAALKEKFGDD-RQKMSQAM 431 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR APF WI DL+ D Sbjct: 432 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFMLWITDLSIKD------ 485 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 PF+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 486 -----PFF--------ILPIIMGATMFIQQQLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 532 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQ I + Sbjct: 533 AGLVLYWVVNNCLSIAQQWYITR 555 >gi|170694073|ref|ZP_02885229.1| 60 kDa inner membrane insertion protein [Burkholderia graminis C4D1M] gi|170141145|gb|EDT09317.1| 60 kDa inner membrane insertion protein [Burkholderia graminis C4D1M] Length = 552 Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 118/329 (35%), Positives = 184/329 (55%), Gaps = 28/329 (8%) Query: 234 YSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + DI+K+ ++ N W+ + Y+AS +IP + + + A Y+ Sbjct: 244 FGDIDKNKEDYAKQADNGWIAMVQHYFASAWIPQQGVKRDIYVEKIDP--ALYRVGVKQP 301 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 I PG+++ + LFAG +E + P E++ D+GW IAKP+F L+ Sbjct: 302 VAAIAPGQTVDVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEK 356 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++ VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK PQ + Sbjct: 357 IHSYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGD-PQKMN 415 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 416 AALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWVLWIHDLSQQDPYF 475 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I P++M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 476 IL-------------------PVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSVMFF 516 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 517 FFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|52424536|ref|YP_087673.1| putative inner membrane protein translocase component YidC [Mannheimia succiniciproducens MBEL55E] gi|81691469|sp|Q65VC2|OXAA_MANSM RecName: Full=Inner membrane protein oxaA gi|52306588|gb|AAU37088.1| YidC protein [Mannheimia succiniciproducens MBEL55E] Length = 540 Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 124/375 (33%), Positives = 200/375 (53%), Gaps = 31/375 (8%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS-DIEKSSISN 244 + N + + I P G+ ++H ++ + + +KYS D K + Sbjct: 183 IQNQTNEAIEVQPYGQ-LKHTLVQSSGSMAMPTYTGGAYSSADTNYKKYSFDEMKDKNLS 241 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 W+ + Y+ S +IP+++ Y S + + + + G S T Sbjct: 242 IDTKAGWVAVLQHYFVSAWIPNQDADNQ---LYTSTANGLGFIGYRGPVVNVPAGGSETI 298 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 + L+ G K E ++ +D+GW +FIAKP+F L++ ++V N+G+AI Sbjct: 299 KSALWTGPK-----LQNEMGAVANHLDLTVDYGWAWFIAKPLFWLLNVIQSIVSNWGLAI 353 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 + T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK + Sbjct: 354 IGVTIVVKGILYPLTKAQYTSMAKMRMLQPKLQEMRERFGDD-RQRMSQEMMKLYKEEKV 412 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NPL GC P+L+Q+P+F A+Y ++E+RHAPF+GWI+DL+A D P+Y Sbjct: 413 NPLGGCLPLLIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQD-----------PYY- 460 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 I PI+M SMF+ KMSP P AD Q I+N+MP++F+ FPAGL++YW Sbjct: 461 -------ILPILMGASMFLLQKMSPTPVADPMQQKIMNFMPLIFMVFFLWFPAGLVLYWL 513 Query: 544 WSNVISIVQQAVIMK 558 SN+I+IVQQ +I + Sbjct: 514 VSNIITIVQQQLIYR 528 >gi|187925954|ref|YP_001897596.1| inner membrane protein translocase component YidC [Burkholderia phytofirmans PsJN] gi|254772762|sp|B2T7U1|OXAA_BURPP RecName: Full=Inner membrane protein oxaA gi|187717148|gb|ACD18372.1| 60 kDa inner membrane insertion protein [Burkholderia phytofirmans PsJN] Length = 552 Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 122/332 (36%), Positives = 190/332 (57%), Gaps = 34/332 (10%) Query: 234 YSDIEKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + DI+K+ ++ S N W+ + Y+AS +IP + + + A Y+ Sbjct: 244 FGDIDKNK-QDYATSADNGWIAMVQHYFASAWIPQQGVKRDIYVEKIDP--ALYRVGVKE 300 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAKPMFML 349 TI PG+++ + LFAG +E E+ L P E++ D+GW IAKP+F L Sbjct: 301 PVPTIAPGQTVDVSARLFAGPEE-------ERMLEGIAPGLELVKDYGWVTIIAKPLFWL 353 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + ++ VGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK PQ Sbjct: 354 LEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGD-PQ 412 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D Sbjct: 413 KMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQD 472 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PF+ I P++M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 473 -----------PFF--------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSV 513 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 514 MFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|300115605|ref|YP_003762180.1| membrane protein insertase [Nitrosococcus watsonii C-113] gi|299541542|gb|ADJ29859.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Nitrosococcus watsonii C-113] Length = 545 Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 151/531 (28%), Positives = 258/531 (48%), Gaps = 69/531 (12%) Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 P D A +L D + +E+K L I + ++ L Y + + + Sbjct: 60 PEVADMDTAPILPDQKT--------IEVKTDLLAIKIGMASGDLYEVQLLNYPVSLKEPN 111 Query: 106 PIVTLLSPSN-----TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 VTLL + T++ A T ++ T + LI + + + L + Sbjct: 112 KPVTLLHKRDPDLFVTQSGLRAASGPSITHEKVQFSAPKTHYELIEDEGILK---VPLTW 168 Query: 161 KNANNILFERTISLDEHYLFKI------VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 ++ N I +T YLF+ ++ N DQ GR +T + Sbjct: 169 EDENGIKVTKT------YLFRRDSYQIDLNIKIENGTDQAWM---GRAYAQFSRTPPESG 219 Query: 215 GV-QEGFIAVLGDKSLVEQKYSDIEKSSIS----NFHESNSWLGISDKYWASVFIPSKET 269 G+ ++ + + EQ+Y ++ ++ + W+ + Y+ + ++P ++ Sbjct: 220 GMFARSYVGAVFSTN--EQEYQKVDFGDLASKSFDRRSPGGWVAMIQHYFVAAWVPREQG 277 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI-- 327 + + K++ + +RY + TI PG+S LF G K + LA+ Sbjct: 278 TNYYYGKHVQN--SRYIVGVMPPQQTIAPGESGQFNLALFTGPK-------IQDRLAVVA 328 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P+ + +D+G +A+P+F LMS+F+NLVGN+G AI+L T VKL+FF L++ Y S A Sbjct: 329 PKLNLTVDYGKLTILAEPLFWLMSWFHNLVGNWGWAIVLLTFVVKLVFFKLSQTSYRSMA 388 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ +QP++ L+E++ +V Q AM++LY+ +NP+ GC PI++QIPVF A+Y ++ Sbjct: 389 RMRKLQPRLLALKERYGDDRQKVGQ-AMMELYRKEKVNPMGGCLPIVVQIPVFIALYWML 447 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+E+R APF WI+DL + DP I P++M +SMF+Q K+ Sbjct: 448 LESVELRQAPFIFWIQDLTSKDPYYIL-------------------PLLMGVSMFVQQKL 488 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 SP P D QA ++ MPV+F FPAGL++YW +N++SI QQ I + Sbjct: 489 SPAPTDPIQAKVMALMPVMFTVFFVMFPAGLVLYWVVNNILSIAQQWYITR 539 >gi|319796643|ref|YP_004158283.1| membrane protein insertase, yidc/oxa1 family domain containing [Variovorax paradoxus EPS] gi|315599106|gb|ADU40172.1| membrane protein insertase, YidC/Oxa1 family domain containing [Variovorax paradoxus EPS] Length = 563 Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 155/508 (30%), Positives = 240/508 (47%), Gaps = 67/508 (13%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNS 138 +I+ +G + L L+ Y D + + V L + Y A+ ++T + + PN Sbjct: 93 ATIDSEGGTVNHLELQKY--DEADRTKRVVLFENGSPATRYVAQTGLLNTVDTGDRFPNH 150 Query: 139 NTVWNLISGKILTPTTPIK-----LVFKNANNILFERT----ISLDEHYLFKIVDTV--T 187 LTP TP +N + FE + + Y+F D Sbjct: 151 -----------LTPMTPKAGPREMAAGQNTLEVSFESAPVGGLKYTKTYVFHRGDYAIGV 199 Query: 188 NNSIDQIRFSPRG-----RIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKS 240 + + + PR +++RH A FG G A +K + + DI K Sbjct: 200 RHEVANVSDQPRDAQLYMQLLRHGTVAAGTMFGTNTFTGPAAYTNEKKFHKLDFKDIAKG 259 Query: 241 SISNFHESN-SWLGISDKYWASVFI----PSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 I +N W+ + Y+AS ++ P+ E +F+ G + A Sbjct: 260 KIEPPPPANDGWIAMVQHYFASAWLLKGDPASE-QLRREFRVKDLGDNLFTVAMVATLPK 318 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYF 353 I PG + T ++ LFAG +E EK L P +++ D+G F I+KP++ L+ Sbjct: 319 IAPGTTQTVSSVLFAGPQE-------EKKLEALAPGLDLVKDYGIFAIISKPLYWLLIQL 371 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + +GN+G AI+ V +K F+ L K Y S A MK I PKI E+RE+ K P Q +Q+ Sbjct: 372 HGFLGNWGWAIVALVVLLKAAFYWLNAKAYASMAKMKAINPKIMEMRERLKDKP-QEMQQ 430 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M+++YKT +NP+ GC+PI++QIPVF A+Y V+ S+EMRHAP+ GWI DL+A DP I Sbjct: 431 EMMRIYKTEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMRHAPWIGWITDLSAPDPWYI 490 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 P++M+ + Q ++P P D QA ++ MP+ F Sbjct: 491 L-------------------PVVMTATSLFQTWLNPTPPDPMQAKLMWIMPLAFSVMFIF 531 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++YW +NV+SI QQ I K G Sbjct: 532 FPAGLVLYWITNNVLSIAQQWFINKRLG 559 >gi|167717468|ref|ZP_02400704.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei DM98] Length = 454 Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 138/441 (31%), Positives = 215/441 (48%), Gaps = 44/441 (9%) Query: 134 ELPNSNTVWNLISGKI----------LTPTTPIKLVFKNANNILFERTISLDEHYLFKIV 183 + PN N V+ ++G L+ +P+K K F R Y+ + Sbjct: 38 DFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRG-----SYVIGVD 92 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSI 242 + N + S ++R T F AV D+ ++ + DI+K+ Sbjct: 93 TKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKA 152 Query: 243 SNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 + N W+ + Y+AS +IP + + Y+ I PG+S Sbjct: 153 DYVTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPGQS 210 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G Sbjct: 211 ADVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWG 265 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT Sbjct: 266 WAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKT 324 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 325 EKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFIL------- 377 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y Sbjct: 378 ------------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLY 425 Query: 542 WSWSNVISIVQQAVIMKMHGA 562 + +NV+SI QQ I + G Sbjct: 426 YVVNNVLSIAQQYYITRTLGG 446 >gi|91785811|ref|YP_561017.1| putative inner membrane protein translocase component YidC [Burkholderia xenovorans LB400] gi|123167872|sp|Q13SH4|OXAA_BURXL RecName: Full=Inner membrane protein oxaA gi|91689765|gb|ABE32965.1| protein translocase subunit yidC [Burkholderia xenovorans LB400] Length = 552 Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 122/332 (36%), Positives = 190/332 (57%), Gaps = 34/332 (10%) Query: 234 YSDIEKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + DI+K+ ++ S N W+ + Y+AS +IP + + + A Y+ Sbjct: 244 FGDIDKNK-QDYATSADNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDP--ALYRVGVKE 300 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAKPMFML 349 TI PG+++ + LFAG +E E+ L P E++ D+GW IAKP+F L Sbjct: 301 PVPTIAPGQTVDVSARLFAGPEE-------ERMLEGIAPGLELVKDYGWVTIIAKPLFWL 353 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + ++ VGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK PQ Sbjct: 354 LEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGD-PQ 412 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D Sbjct: 413 KMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQD 472 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PF+ I P++M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 473 -----------PFF--------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSV 513 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 514 MFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|120556799|ref|YP_961150.1| putative inner membrane protein translocase component YidC [Marinobacter aquaeolei VT8] gi|166975875|sp|A1U7J4|OXAA_MARAV RecName: Full=Inner membrane protein oxaA gi|120326648|gb|ABM20963.1| protein translocase subunit yidC [Marinobacter aquaeolei VT8] Length = 567 Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 128/368 (34%), Positives = 194/368 (52%), Gaps = 33/368 (8%) Query: 200 GRIMRHKPQ--TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES--NSWLGIS 255 G+I+R + T+ + G++ V+ +KY D E S ++S N WL Sbjct: 223 GKIVRDQAPDPTSQASMGIRAYLGMVISTPEDPYEKY-DFEDLSEKRVNQSVTNGWLAFL 281 Query: 256 DKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315 Y+ + +IP ++ Q D H F T+ PG++ + G Sbjct: 282 QHYFLTAWIPERDQKAQFQTTRRGDLHV---MGFVYPATTVAPGETAEVGATAYVG---- 334 Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 P I + LA P + +D+GW +FI+ P+F ++ +FY LVGN+G+AI+L TV VK +F Sbjct: 335 PKIIDRLEALA-PNLDRTVDFGWLFFISLPLFYILEWFYGLVGNWGVAIILLTVLVKAVF 393 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 F L+ Y S A M+ + P++ L+E + Q + + M+ LYK INPL GC PIL+ Sbjct: 394 FHLSATSYRSMAKMRAVAPQLTRLKELYGDD-RQRMSQEMMALYKREKINPLGGCLPILV 452 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+PVF ++Y V+ S+++RHAPF WI+DL+ DP I PI Sbjct: 453 QMPVFISLYWVLFESVQLRHAPFMLWIQDLSQMDPYFIL-------------------PI 493 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 +M SMFIQM ++P P D QA I+ MP++F FPAGL++YW +N++SI QQ Sbjct: 494 LMGASMFIQMSLNPTPPDPMQAKIMKLMPLIFTVFFLWFPAGLVLYWLVNNILSISQQWY 553 Query: 556 IMKMHGAE 563 I + AE Sbjct: 554 ITRKIEAE 561 >gi|311696590|gb|ADP99463.1| inner membrane protein translocase component YidC [marine bacterium HP15] Length = 571 Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 127/415 (30%), Positives = 220/415 (53%), Gaps = 34/415 (8%) Query: 156 IKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ--TATN 212 + L + + N + + + + Y + V N S ++ + + G+I+R + T+ Sbjct: 182 VDLTYTSDNGVQITKRYEFERNSYEISVKYLVENQSSEEWQANFTGKIVRDQSPDPTSQT 241 Query: 213 TFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 + G+Q G + + + + D++++ I N +N WL Y+ S ++P ++ Sbjct: 242 SMGIQAFLGLVISSPEDPYEKFDFGDLQENQI-NQSVTNGWLAFLQHYFLSAWVPERD-- 298 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 +Q++ G Y F ++ PG++ + G P I + +A P Sbjct: 299 IPAQYQTTRRG-PNYVMGFVYPATSVAPGETAEIGARAYVG----PKIIERLEGMA-PNL 352 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + +D+GW +FI+ P+F+++ +F++LVGN+G++I+L TV VK +FF L+ Y S A M+ Sbjct: 353 DRTVDFGWLFFISLPLFIILDWFHSLVGNWGVSIILLTVLVKAVFFHLSATSYKSMAKMR 412 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P++ L+E + Q + + M+ LYK INPL GC PIL+Q+PVF ++Y V+ S Sbjct: 413 AVAPQLTRLKELYGDD-RQRMSQEMMALYKREKINPLGGCLPILVQMPVFISLYWVLFES 471 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +++RHAPF WI+DL+ DP I PI+M SMF+QM ++P Sbjct: 472 VQLRHAPFMLWIQDLSVMDPYFIL-------------------PILMGASMFLQMSLNPT 512 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P D QA I+ MP++F FPAGL++YW +N++SI QQ I + AE+ Sbjct: 513 PPDPMQAKIMKMMPLIFTVFFLWFPAGLVLYWLVNNILSIAQQWYITRKIEAEMA 567 >gi|116053719|ref|YP_794046.1| putative inner membrane protein translocase component YidC [Pseudomonas aeruginosa UCBPP-PA14] gi|218894670|ref|YP_002443540.1| putative inner membrane protein translocase component YidC [Pseudomonas aeruginosa LESB58] gi|296392435|ref|ZP_06881910.1| putative inner membrane protein translocase component YidC [Pseudomonas aeruginosa PAb1] gi|313111480|ref|ZP_07797281.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa 39016] gi|122256261|sp|Q02DE0|OXAA_PSEAB RecName: Full=Inner membrane protein oxaA gi|254773013|sp|B7V7A5|OXAA_PSEA8 RecName: Full=Inner membrane protein oxaA gi|115588940|gb|ABJ14955.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa UCBPP-PA14] gi|218774899|emb|CAW30718.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa LESB58] gi|310883783|gb|EFQ42377.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa 39016] Length = 578 Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 116/325 (35%), Positives = 183/325 (56%), Gaps = 32/325 (9%) Query: 236 DIEKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D++K F ES W+ Y+ + ++P+K Q DG Y F+ Sbjct: 275 DMDKE---QFKESVQGGWVAWLQHYFVTAWVPTKGE--QHQVMTRKDGQGNYIVGFTGPT 329 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 +++ G + T L+AG P + + K+L+ P E+ +D+G+ +FIA+P+F L+ + Sbjct: 330 LSVPAGSKVETDLTLYAG----PKLQKHLKELS-PGLELTVDYGFLWFIAQPIFWLLQHI 384 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 ++L+GN+G +I+ TV +KL FFPL+ Y S A M+ + PK+ ++E+ Q + + Sbjct: 385 HSLIGNWGWSIIALTVLIKLAFFPLSAASYRSMARMRAVSPKMQAIKEQHGDDR-QKMSQ 443 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ GWI DL+ D Sbjct: 444 AMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWLGWITDLSVKD---- 499 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 PF+ I PI+M +M IQ ++P P D QA ++ MP++F F Sbjct: 500 -------PFF--------ILPIVMGGTMLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLW 544 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N +SI QQ I + Sbjct: 545 FPAGLVLYWVVNNCLSIAQQWYITR 569 >gi|15600761|ref|NP_254255.1| inner membrane protein translocase component YidC [Pseudomonas aeruginosa PAO1] gi|38503188|sp|Q9HT06|OXAA_PSEAE RecName: Full=Inner membrane protein oxaA gi|9951909|gb|AAG08953.1|AE004968_7 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 578 Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 116/325 (35%), Positives = 183/325 (56%), Gaps = 32/325 (9%) Query: 236 DIEKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D++K F ES W+ Y+ + ++P+K Q DG Y F+ Sbjct: 275 DMDKE---QFKESVQGGWVAWLQHYFVTAWVPTKGE--QHQVMTRKDGQGNYIVGFTGPT 329 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 +++ G + T L+AG P + + K+L+ P E+ +D+G+ +FIA+P+F L+ + Sbjct: 330 LSVPAGSKVETDLTLYAG----PKLQKHLKELS-PGLELTVDYGFLWFIAQPIFWLLQHI 384 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 ++L+GN+G +I+ TV +KL FFPL+ Y S A M+ + PK+ ++E+ Q + + Sbjct: 385 HSLIGNWGWSIIALTVLIKLAFFPLSAASYRSMARMRAVSPKMQAIKEQHGDDR-QKMSQ 443 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ GWI DL+ D Sbjct: 444 AMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWLGWITDLSVKD---- 499 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 PF+ I PI+M +M IQ ++P P D QA ++ MP++F F Sbjct: 500 -------PFF--------ILPIVMGGTMLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLW 544 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N +SI QQ I + Sbjct: 545 FPAGLVLYWVVNNCLSIAQQWYITR 569 >gi|296157622|ref|ZP_06840457.1| membrane protein insertase [Burkholderia sp. Ch1-1] gi|295892394|gb|EFG72177.1| membrane protein insertase [Burkholderia sp. Ch1-1] Length = 552 Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 122/332 (36%), Positives = 190/332 (57%), Gaps = 34/332 (10%) Query: 234 YSDIEKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + DI+K+ ++ S N W+ + Y+AS +IP + + + A Y+ Sbjct: 244 FGDIDKNK-QDYATSADNGWIAMVQHYFASAWIPQQGVKRDIYVEKIDP--ALYRVGVKE 300 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAKPMFML 349 TI PG+++ + LFAG +E E+ L P E++ D+GW IAKP+F L Sbjct: 301 PVPTIAPGQTVDVSARLFAGPEE-------ERMLEGIAPGLELVKDYGWVTIIAKPLFWL 353 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + ++ VGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK PQ Sbjct: 354 LEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGD-PQ 412 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D Sbjct: 413 KMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQD 472 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PF+ I P++M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 473 -----------PFF--------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSV 513 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 514 MFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|107104669|ref|ZP_01368587.1| hypothetical protein PaerPA_01005748 [Pseudomonas aeruginosa PACS2] Length = 578 Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 116/325 (35%), Positives = 183/325 (56%), Gaps = 32/325 (9%) Query: 236 DIEKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D++K F ES W+ Y+ + ++P+K Q DG Y F+ Sbjct: 275 DMDKE---QFKESVQGGWVAWLQHYFVTAWVPTKGE--QHQVMTRKDGQGNYIVGFTGPT 329 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 +++ G + T L+AG P + + K+L+ P E+ +D+G+ +FIA+P+F L+ + Sbjct: 330 LSVPAGSKVETDLTLYAG----PKLQKHLKELS-PGLELTVDYGFLWFIAQPIFWLLQHI 384 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 ++L+GN+G +I+ TV +KL FFPL+ Y S A M+ + PK+ ++E+ Q + + Sbjct: 385 HSLIGNWGWSIIALTVLIKLAFFPLSAASYRSMARMRAVSPKMQAIKEQHGDDR-QKMSQ 443 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ GWI DL+ D Sbjct: 444 AMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWLGWITDLSVKD---- 499 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 PF+ I PI+M +M IQ ++P P D QA ++ MP++F F Sbjct: 500 -------PFF--------ILPIVMGGTMLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLW 544 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N +SI QQ I + Sbjct: 545 FPAGLVLYWVVNNCLSIAQQWYITR 569 >gi|28872711|ref|NP_795330.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato str. DC3000] gi|38502973|sp|Q87TS1|OXAA_PSESM RecName: Full=Inner membrane protein oxaA gi|28855967|gb|AAO59025.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato str. DC3000] Length = 562 Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 119/327 (36%), Positives = 186/327 (56%), Gaps = 28/327 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K I + W+ Y+ + +IP + Q + D Y F++ ++ Sbjct: 257 DIDKGQIKE-NVQGGWVAWLQHYFVTAWIPDHNVTNAVQTR--KDSQGNYIIGFTSPTLS 313 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG TT L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 314 VAPGAQGETTATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 368 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 369 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLAVLKEQHGDDR-QKMSQAM 427 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 428 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKDP----- 482 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 F+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 483 ------FF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 528 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGA 562 AGL++YW +N +SI QQA I + GA Sbjct: 529 AGLVLYWVVNNTLSIAQQAYITRKIGA 555 >gi|254237758|ref|ZP_04931081.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126169689|gb|EAZ55200.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 565 Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 116/325 (35%), Positives = 183/325 (56%), Gaps = 32/325 (9%) Query: 236 DIEKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D++K F ES W+ Y+ + ++P+K Q DG Y F+ Sbjct: 262 DMDKE---QFKESVQGGWVAWLQHYFVTAWVPTKGE--QHQVMTRKDGQGNYIVGFTGPT 316 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 +++ G + T L+AG P + + K+L+ P E+ +D+G+ +FIA+P+F L+ + Sbjct: 317 LSVPAGSKVETDLTLYAG----PKLQKHLKELS-PGLELTVDYGFLWFIAQPIFWLLQHI 371 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 ++L+GN+G +I+ TV +KL FFPL+ Y S A M+ + PK+ ++E+ Q + + Sbjct: 372 HSLIGNWGWSIIALTVLIKLAFFPLSAASYRSMARMRAVSPKMQAIKEQHGDDR-QKMSQ 430 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ GWI DL+ D Sbjct: 431 AMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWLGWITDLSVKD---- 486 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 PF+ I PI+M +M IQ ++P P D QA ++ MP++F F Sbjct: 487 -------PFF--------ILPIVMGGTMLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLW 531 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N +SI QQ I + Sbjct: 532 FPAGLVLYWVVNNCLSIAQQWYITR 556 >gi|317050194|ref|YP_004117842.1| membrane protein insertase, YidC/Oxa1 family domain containing [Pantoea sp. At-9b] gi|316951811|gb|ADU71286.1| membrane protein insertase, YidC/Oxa1 family domain containing [Pantoea sp. At-9b] Length = 548 Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 143/515 (27%), Positives = 246/515 (47%), Gaps = 69/515 (13%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS-----------------P 113 + +K L +IN +G + +L Y + S++P L + P Sbjct: 61 ITVKTDVLSLNINTRGGDIEQASLLTYPDKLGSDAPFQLLETTPAFIYQAQSGLTGRNGP 120 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 N N A + +T ++ E+ T + L + N +++ +T Sbjct: 121 DNPNNG--ARPLFTTTQDHFEMAEGQTELR------------VPLTWTGENGVVYTKTFV 166 Query: 174 LDEHYLFKIVDTVTNNSIDQ-IRFSPRGRIM------RHKPQTATNTFGVQ--EGFIAVL 224 VD NN+ Q + + G++ +H+ T +N F + G Sbjct: 167 FKRGEFAVNVDYNINNASQQPLEVAMFGQLKQTIEVPKHR-DTGSNNFALHTFRGAAYST 225 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 D + K+ I + N SN W+ + +Y+A+ ++P E + L +G A Sbjct: 226 SDAKYEKYKFDTINDNENLNTTTSNGWVAMLQQYFATAWVPRTEGTNTLYTSNLGNGVA- 284 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + + +TI PG L+ G P I +A P ++ +D+GW +FI++ Sbjct: 285 -AIGYKSAPVTIAPGAQQNLGATLWVG----PEIQDKMAAIA-PHLDLTVDYGWLWFISQ 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 339 PLFKLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI D Sbjct: 399 DD-KQKMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFILWIHD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+A D P+Y I P+IM ++MF KMSP D Q I+ +M Sbjct: 458 LSAQD-----------PYY--------ILPVIMGITMFFIQKMSPTTVTDPMQQKIMTYM 498 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 PV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 499 PVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|146309633|ref|YP_001190098.1| putative inner membrane protein translocase component YidC [Pseudomonas mendocina ymp] gi|166977399|sp|A4Y1A0|OXAA_PSEMY RecName: Full=Inner membrane protein oxaA gi|145577834|gb|ABP87366.1| protein translocase subunit yidC [Pseudomonas mendocina ymp] Length = 581 Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 119/325 (36%), Positives = 185/325 (56%), Gaps = 32/325 (9%) Query: 236 DIEKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 DI+K S F E+ W+ Y+ + ++PSK+++ Q + D Y F+ Sbjct: 276 DIDKQS---FKETVQGGWVAWLQHYFVTAWVPSKDSTNLVQTR--KDSQGNYIVGFTGPA 330 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + + G T L+AG P + + L+ P E+ +D+G+ +F+A+P+F L+ Sbjct: 331 VQVAAGAQGETGAILYAG----PKLQEHLGKLS-PGLELTVDYGFLWFLAQPIFWLLEVI 385 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + L+GN+G +I++ T+ +KL+FFPL+ Y S A M+ + PK+ L+E+ Q + + Sbjct: 386 HGLLGNWGWSIIVLTIIIKLIFFPLSAASYRSMARMRAVSPKLQALKEQHGDD-RQKMSQ 444 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ WI DL+ DP Sbjct: 445 AMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWMFWITDLSIKDP--- 501 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 F IL PIIM +MFIQ +++P P D QA +L MP++F F Sbjct: 502 ---FFIL-------------PIIMGATMFIQQQLNPTPPDPMQARVLKLMPIIFTFFFLW 545 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N++SI QQ I + Sbjct: 546 FPAGLVLYWVVNNILSIGQQWYITR 570 >gi|302341714|ref|YP_003806243.1| membrane protein insertase, YidC/Oxa1 family [Desulfarculus baarsii DSM 2075] gi|301638327|gb|ADK83649.1| membrane protein insertase, YidC/Oxa1 family [Desulfarculus baarsii DSM 2075] Length = 546 Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 134/386 (34%), Positives = 206/386 (53%), Gaps = 21/386 (5%) Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 T D H F++ ++ N + +I +P + + + N++ V+ SL Sbjct: 171 TFRPDSHA-FQLSVSLQNKNAGRIELTPELILAEYVSKMHANSYAFTGS--QVVAGGSLE 227 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 E + D+E S + L +S Y+ P + +Q K + G A + + Sbjct: 228 ELDHGDLEDSPV--VAGPIDCLTLSIPYFMGAVAPESWPAV-AQGKPSARGWADAKLMTA 284 Query: 291 ANEITILP---GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +LP G+S+ ++ G KE + LA M +D+GWF IAKPM Sbjct: 285 TLVSPLLPMDAGQSLDLKFLVYYGPKELHVLEPLGHSLA-----MAVDFGWFDVIAKPML 339 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +++F++ V N+G+AI++ TV +KLLF+PL K Y S M+ +QP+I ++REK+K Sbjct: 340 AGLNFFHDYVNNYGVAIIIITVLIKLLFWPLQNKSYESMKKMQKLQPQIAKIREKYKDDK 399 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 ++ Q+ M QLYKT+ +NPL GC P+L Q+PVF A YKV+ S+E+RHAPFW WI DL+A Sbjct: 400 QEMNQQVM-QLYKTYKVNPLGGCLPMLAQVPVFIAFYKVLGSSIELRHAPFWLWINDLSA 458 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 D I F I PF G + + ++M SMFI KMSP D Q ++ MPV+F Sbjct: 459 PDRLPIG--FEI-PFVGDG---IPVLTLLMGASMFITQKMSPATGDPTQQKMMMLMPVIF 512 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQ 553 +FP+GL++YW N++ I QQ Sbjct: 513 TVMFINFPSGLVLYWFVQNLLGIGQQ 538 >gi|110835614|ref|YP_694473.1| inner membrane protein [Alcanivorax borkumensis SK2] gi|123149157|sp|Q0VKU7|OXAA_ALCBS RecName: Full=Inner membrane protein oxaA gi|110648725|emb|CAL18201.1| inner membrane protein, 60 kDa, putative [Alcanivorax borkumensis SK2] Length = 582 Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 154/539 (28%), Positives = 246/539 (45%), Gaps = 58/539 (10%) Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY--HLDVSSNS 105 Q DN +V D AQ S R+E+ L IN G L L Y H+D + + Sbjct: 68 QSDNDLPSVSPADIAQPTPSSQRIEVNTDVLRVEINPVGGDIVRLALPDYPKHVD-TPDQ 126 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL-----VF 160 P V L N+ Y A+ V N + WN +L + Sbjct: 127 PFV--LMDQNSNGTYVAQSGLVGK-NGTDSSKGRPHWNSAQQSYRLAEGDNELNVDLTLT 183 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH---KPQTATNTFGVQ 217 +++ + +R YL ++ V NN + G+I R P + F Sbjct: 184 QDSGAEIIKRYTFEKGSYLIRVSHIVRNNGSTPWTGALYGQIKRDGRDDPGLSKAGFAPM 243 Query: 218 EGFIAVL---GDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHS 273 ++ DK + + D+ + + + WL + Y+ S +IP + H Sbjct: 244 PTYLGAAYWSADKPYNKLTFDDMSEDDVKLDQTVEGGWLAMVQHYFVSAWIPDAKQKNHY 303 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 YL +Y +F + TI PG+ + +AG K+ + P M Sbjct: 304 SSVYLK-SRDQYLLRFVSPNTTIQPGEESVLYSEFYAGPKQQDNLEAIS-----PGLNMT 357 Query: 334 IDWGWFYFIAKPMFMLMSYFYNL--------------VGNFGIAIMLTTVFVKLLFFPLA 379 +D+GW +FI++P+F L+ + + VGN+G+AI+L T+ +K +FF L+ Sbjct: 358 VDYGWLWFISQPIFALLVFLQSGEVSVFGMDIDIGGGVGNWGVAIILLTLIIKAIFFKLS 417 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 Y S A M+ + P++ ++E+ K Q Q + L+K INPL GC P+L+Q+PV Sbjct: 418 ATSYRSMAKMRKVAPEMQRIKEQNKNDK-QKQQMETMNLFKREKINPLGGCLPMLVQMPV 476 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F A+Y V+ S+E+R APF+ WI DL+ DP F L PI+M Sbjct: 477 FIALYYVLLESVELRQAPFFLWINDLSVMDP--YFVL-----------------PILMGA 517 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 SMF+Q +++P PAD QA ++ WMP++F + FPAGL++YW +N++SI QQ +I + Sbjct: 518 SMFLQTRLNPTPADPTQAQVMKWMPMIFAVFMLWFPAGLVLYWLTNNILSIAQQWIITR 576 >gi|308051501|ref|YP_003915067.1| protein translocase subunit yidC [Ferrimonas balearica DSM 9799] gi|307633691|gb|ADN77993.1| protein translocase subunit yidC [Ferrimonas balearica DSM 9799] Length = 539 Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 125/413 (30%), Positives = 214/413 (51%), Gaps = 39/413 (9%) Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSID-----QIRFSPRGRIMRHKP 207 T + L+F +AN + FE+ + + VD + +N+ D Q+ + I + + Sbjct: 151 TLVVPLIFTDANGVKFEKRYTFTRGHYDVRVDYLVHNTSDAAIQVQMYSQLKQSIGKSEG 210 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 T+ G D + + +EK++++ + W+ + Y+ S ++PS Sbjct: 211 SMMMPTY---RGGAYSTADTRYEKYAFDKMEKNNLAEATQGG-WIAMLQHYFVSAWVPSA 266 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 +++ + + + G A K A + I PG T L+ G K + Sbjct: 267 DST-NDIYSNVVSGDAIIGVKQPA--VQIAPGAEQTLGATLYVGPKNQEALSALS----- 318 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +++D+GW +FIA+P+ L+ + +LV N+G+AI+L T+ ++ +PL K QY S A Sbjct: 319 PTLNLVVDYGWLWFIAQPLHSLLMFLQSLVSNWGVAIILMTLIIRGFMYPLTKAQYTSMA 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ +QPK+ +L+E+F Q + +AM++LY+ +NP+ GC P+LLQ P+F A Y V+ Sbjct: 379 KMRKLQPKLADLKERFGDD-RQRMSQAMMELYQKEKVNPMGGCLPLLLQFPIFIAFYWVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+E+RHAPF+GWI DL+ D P+Y + P++M +SMF KM Sbjct: 438 LESVELRHAPFFGWITDLSVKD-----------PYY--------VLPVLMGISMFAMQKM 478 Query: 508 SPPPA--DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P A D Q I+ +MPV+F FP+GL++YW N+++I QQ I + Sbjct: 479 QPTMATMDPMQQKIMQYMPVMFTVFFLWFPSGLVLYWLVGNLVAIAQQLFIYR 531 >gi|254251055|ref|ZP_04944373.1| Preprotein translocase subunit YidC [Burkholderia dolosa AUO158] gi|124893664|gb|EAY67544.1| Preprotein translocase subunit YidC [Burkholderia dolosa AUO158] Length = 554 Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 119/330 (36%), Positives = 181/330 (54%), Gaps = 28/330 (8%) Query: 234 YSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 +SD++K+ + N W+ + Y+AS +IP + + + Y+ Sbjct: 245 FSDLDKNKADYVTSADNGWVAMVQHYFASAWIPQQGVKRDIYAEKIDP--TLYRVGVKQP 302 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI PG+S LFAG +E + P E++ D+GW IAKP+F L+ Sbjct: 303 VATIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEK 357 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + Sbjct: 358 IHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMN 416 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 417 AALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYF 476 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I P++M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 477 IL-------------------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFF 517 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 FPAGL++Y+ +NV+SI QQ I + G Sbjct: 518 FFPAGLVLYYVVNNVLSIAQQYYITRKLGG 547 >gi|258406259|ref|YP_003199001.1| membrane protein insertase, YidC/Oxa1 family [Desulfohalobium retbaense DSM 5692] gi|257798486|gb|ACV69423.1| membrane protein insertase, YidC/Oxa1 family [Desulfohalobium retbaense DSM 5692] Length = 550 Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 164/600 (27%), Positives = 278/600 (46%), Gaps = 112/600 (18%) Query: 9 VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV---------LID 59 VA+ LS I++ W + + +N+ N + P ++S + V ++ Sbjct: 10 VAVVLSFIVIVGWNFLFPPQQPPTQSNQAANQTQQETPTVAEDSSSQVPGASQTGDGVVA 69 Query: 60 DRAQ-ALSMS--------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 RAQ +LS S RV ++ P +IN G + L L+ Y ++ + V L Sbjct: 70 GRAQQSLSGSTYSPEGSGKRVTVETPLYKATINAAGGVLEHLVLKQYQEAINPGAKNVDL 129 Query: 111 LSPSNTKNA----------YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 ++ + A ++E D+ N+++L + + G I Sbjct: 130 ITRGTVQKAPMGLIWQQRPTWSEADWELQGNDLQLGQGESGSLTLVGTI----------- 178 Query: 161 KNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + + ERT+ E YL V N R T T +F + Sbjct: 179 ---DGVRLERTLHFSAETYLIDETLNVAN--------------ARDHSLTGTVSFTMASE 221 Query: 220 FIAVLGDKSLVE--------QKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETS 270 +A + E K SD ++ I + E+ SW GI+ Y+ +P+ Sbjct: 222 QLAEESRYNRTELIYFNGGLNKESDTDELQIGIHPAETVSWGGIASNYFLLAAVPTSGNM 281 Query: 271 FHSQFKYLSDGHARYQAKFS----ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 D +Y+ + +++ + P +S + + G KE + ++L Sbjct: 282 ---------DLRGKYEDEIYRVALGSQVAVAPEQSAELSCSYYVGPKESEQLAQAPQNLL 332 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 I +GWF FIAKP+ ++ +FY+ VGN+G+AI+L T+ +K++F+PL++K Y S Sbjct: 333 AA-----IQYGWFDFIAKPLIKVLKFFYSYVGNYGVAIILLTILIKIVFWPLSQKSYKSM 387 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 MK +QP + +L+EK+ Q L + M++LYKT+ +NP GC P+LLQIPVF A+Y+ Sbjct: 388 EKMKKLQPMMTQLKEKYGDD-RQKLNEEMMRLYKTYKVNPAGGCLPMLLQIPVFIALYQA 446 Query: 447 ISISLEMRHAPFWG--------WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 + ++E+RHA F W+ DL+A DP + + PI+M Sbjct: 447 LLGAIELRHAAFITHVPFTDIIWLADLSAKDP-------------------LYVTPIVMG 487 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MF+Q KM+P P D QA ++ +MP++F F SFPAGL++YW +NV+SI QQ ++ + Sbjct: 488 ATMFLQQKMTPTPGDSTQAKVMMFMPLIFTFIFLSFPAGLVVYWLVNNVLSIAQQWMLTR 547 >gi|157368277|ref|YP_001476266.1| putative inner membrane protein translocase component YidC [Serratia proteamaculans 568] gi|166977412|sp|A8G7P8|OXAA_SERP5 RecName: Full=Inner membrane protein oxaA gi|157320041|gb|ABV39138.1| 60 kDa inner membrane insertion protein [Serratia proteamaculans 568] Length = 545 Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 152/572 (26%), Positives = 265/572 (46%), Gaps = 60/572 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S +I AWQ + + + N P D + +AV + Sbjct: 4 QRNLLLIALLFVSFMIWQAWQTDNAPQPVAQTTQQTSN------PATGDAASSAVPASGQ 57 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + ++++ V L +IN +G + L Y + S++P L T A+ Sbjct: 58 GKLITVNTDV------LSLTINTRGGDIEQAKLLAYPDTLGSSTPFQLL----ETTPAFV 107 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTP-------IKLVFKNANNILFERTISL 174 + T N +N L + T P I L F + ++ +T L Sbjct: 108 YQAQSGLTGRNGPDNPANGERPLFQAAQDSYTLPEGQEELRIPLTFTGKDGAIYTKTFVL 167 Query: 175 DE-HYLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGVQEGFIAVLGDK 227 HY + V N S + + G++ +H+ T +N F + A Sbjct: 168 KRNHYAVAVDYNVDNKSTTPLELTLFGQLKQTTELPKHR-DTGSNNFALHTFRGAAYSSS 226 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 QKY+ +K + W+ + +Y+A+ ++P+ + S + F G Sbjct: 227 DDKYQKYA-FDKDENLSVTTQGGWVAMLQQYFATAWVPATQGS--NTFYTAKPGDNLSTI 283 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F + + + PG L+ G P + LA P ++ +D+GW +FI++P+F Sbjct: 284 GFKSTPVVVQPGAQQQLNATLWVG----PELQDQMAQLA-PHLDLTVDYGWLWFISQPLF 338 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 339 KLLKFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD- 397 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 398 KQRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 457 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 D P+Y I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 458 QD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 498 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 499 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 530 >gi|330721634|gb|EGG99650.1| Inner membrane protein translocase component YidC2C long form [gamma proteobacterium IMCC2047] Length = 345 Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 124/345 (35%), Positives = 197/345 (57%), Gaps = 32/345 (9%) Query: 219 GFIAVLGDKS-LVEQKYSDIEKSSISN--FHESNS--WLGISDKYWASVFIPSKETSFHS 273 G + LG + VE Y ++ I++ F E N+ W+ I Y+ SV++P+K+ Sbjct: 16 GMASFLGAATQTVEDNYVKVDFDDIADEPFKEKNTGGWVAILQHYFVSVWVPNKDQQHLY 75 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + + S G A + + PG+ T L+AG P I + ++ P E+ Sbjct: 76 EVRKNSQGENI--AGLVSPATIVHPGQQATVGAQLYAG----PKIQDRLEQIS-PSLELT 128 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 ID+G+ +FI +P+F L+S+F++ +GN+G AI+ TT+ +KL FF L+ Y S ANM+ + Sbjct: 129 IDYGFLFFIGQPLFWLLSFFHSFLGNWGWAIIFTTLVIKLAFFHLSATSYKSMANMRRVG 188 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ ++E+ S Q + AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+E+ Sbjct: 189 PEMARIKEQ-HGSDRQKMSAAMMELYKKEKINPLGGCLPILVQMPVFIALYWVLMESVEL 247 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R APF WI+DLA DP LF I PI+M ++M+ Q ++P P D Sbjct: 248 RQAPFMFWIEDLAVKDP-----LF--------------ILPILMGITMYGQQLLNPTPPD 288 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 QA ++ +P++F F FP+GL++YW +N++SI QQ VI + Sbjct: 289 PTQAKVMKMLPIMFTFFFLWFPSGLVLYWVANNILSIAQQWVITR 333 >gi|330818731|ref|YP_004362436.1| Putative inner membrane protein translocase component YidC [Burkholderia gladioli BSR3] gi|327371124|gb|AEA62480.1| Putative inner membrane protein translocase component YidC [Burkholderia gladioli BSR3] Length = 553 Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 155/516 (30%), Positives = 247/516 (47%), Gaps = 49/516 (9%) Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 D ++ + V+ G I+ +G L L+ D VTL +TK+ Sbjct: 71 DSTAPIAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK-EGDGKQPDLFVTLFD--HTKDH 127 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKN--ANNILFERTISL 174 + V+ N PN N ++ +G + +KL F++ + +T + Sbjct: 128 TYLARTGVTGGN---FPNHNDLYTPAAGNPSALAAGQDSMKLSFESQEKGGVKVVKTYTF 184 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRG-----RIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 VDT ID + +P I+R T F AV D+ Sbjct: 185 TRGSYVIGVDT----KIDNVGTAPVTPTVYMEIVRDSTPVETPLFSHTFLGPAVYTDQKH 240 Query: 230 VEQ-KYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 ++ +SDI+K+ + N W+ + Y+AS +IP + + + R Sbjct: 241 FQKITFSDIDKNKAEYISSADNGWVAMVQHYFASAWIPQQGVKRDIYVEKIDPSLYRVGV 300 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 K TI PG+S + LFAG +E + P +++ D+GW IAKP+F Sbjct: 301 KEQVK--TIEPGQSADVSARLFAGPEEERVLEGIA-----PGLDLVKDYGWVTIIAKPLF 353 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + VGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK S Sbjct: 354 WLLQKIHGYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SD 412 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ Sbjct: 413 PQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQ 472 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 D PF+ I P++M+ SMF+Q +++P P D QA ++ +MP+ F Sbjct: 473 RD-----------PFF--------ILPVLMAGSMFLQTRLNPTPPDPVQAKMMMFMPIAF 513 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++Y+ +NV+SI QQ I + G + Sbjct: 514 SVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTIGKK 549 >gi|90023654|ref|YP_529481.1| protein translocase subunit yidC [Saccharophagus degradans 2-40] gi|122995696|sp|Q21DG0|OXAA_SACD2 RecName: Full=Inner membrane protein oxaA gi|89953254|gb|ABD83269.1| protein translocase subunit yidC [Saccharophagus degradans 2-40] Length = 557 Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 124/404 (30%), Positives = 204/404 (50%), Gaps = 28/404 (6%) Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + L N + +R YL + +TN + G+I+R + + G Sbjct: 175 VDLTLDQENAQITKRFTFTKSSYLIDVEYIITNRADTPWAAKLYGQIIRDGSEPSYGYMG 234 Query: 216 VQEGFIAVLGDKSLVEQKYS-DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 ++ A + + +K S D + W+ + Y+ S +IP K+ + + Sbjct: 235 MRPYLGAAITTPEVNYEKVSFDDMDDGPFKVEQKGGWVSLIQHYFISAWIPPKDATNSYE 294 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 S G+ Y +F + T+ P T +AG K + P ++ I Sbjct: 295 LSKSSKGN--YVLRFISETTTVAPHSVGTVKAGFYAGPKNIRRLEEIS-----PHLDLTI 347 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+ + +FIAKP+F + + + LVGN+G+AI+L TV +K +FF + Y S A M+ +QP Sbjct: 348 DYSFLWFIAKPLFFALDFIHGLVGNWGVAIILLTVLIKAVFFYPSAMSYRSMAKMRKLQP 407 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 + EL+E++ + Q + +++LYK +NP GC PILLQ+PVF ++Y +I S+E+R Sbjct: 408 MMAELKERYGED-KQKMSGELMKLYKKEKVNPFGGCLPILLQMPVFISLYWMIMESVELR 466 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 H PF+ WI+DL+ DP LF I P++M ++M+IQ K++P P D Sbjct: 467 HQPFFLWIQDLSVKDP-----LF--------------ILPLLMGVTMYIQQKLNPTPPDP 507 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 QA ++ MP+ F F FPAGL++YW +N +SI QQ VI + Sbjct: 508 MQAKVMQMMPIGFTFLFMFFPAGLVLYWVVNNTLSISQQYVITR 551 >gi|239818257|ref|YP_002947167.1| 60 kDa inner membrane insertion protein [Variovorax paradoxus S110] gi|239804834|gb|ACS21901.1| 60 kDa inner membrane insertion protein [Variovorax paradoxus S110] Length = 565 Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 157/506 (31%), Positives = 241/506 (47%), Gaps = 67/506 (13%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNT 140 I+ +GA + L L Y D + + V L ++ Y A+ ++ ++ E PN Sbjct: 96 IDSEGATVNYLELLKY--DEADRTKHVVLFENASPATRYVAQTGLLNPVDSGERFPNH-- 151 Query: 141 VWNLISGKILTPTTPIK-----LVFKNANNILFERT----ISLDEHYLFKIVDTV--TNN 189 LTP P +N + FE + + Y+FK D + Sbjct: 152 ---------LTPMAPKAGPREMAEGQNTLEVSFESAPVGGLKYVKTYVFKRGDYAIGVRH 202 Query: 190 SIDQIRFSPRG-----RIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSI 242 + + PR +++RH A FG G A +K + + DI K I Sbjct: 203 EVVNVSDQPRDAQLYMQLLRHGTVAAGTMFGTNTFTGPAAYTNEKKFHKLDFKDIAKGKI 262 Query: 243 SNFHESN-SWLGISDKYWASVFI----PSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 +N W+ + Y+AS ++ P+ E +F+ G Y A I Sbjct: 263 EPPPPANDGWIAMVQHYFASAWLLKGDPASE-QLRREFRVKDLGDNLYTVAMVATLPKIA 321 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 PG + + LFAG +E EK L P +++ D+G F I+KP++ L++ + Sbjct: 322 PGATQVVNSALFAGPEE-------EKKLEAIAPGLDLVKDYGIFAIISKPLYWLLTQLHG 374 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G AI+ V +K F+ L K Y S A MK I PKI E+RE+ K P Q +Q+ M Sbjct: 375 ILGNWGWAIVALVVLLKAAFYWLNAKAYASMAKMKAINPKIMEMRERLKDKP-QEMQQEM 433 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++YKT +NP+ GC+PI++QIPVF A+Y V+ S+EMRHAP+ GWI DL+A DP I Sbjct: 434 MRIYKTEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMRHAPWIGWITDLSAPDPWYIL- 492 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 P++M+L+ Q ++P P D QA ++ MP+ F FP Sbjct: 493 ------------------PVVMTLTSLFQTWLNPTPPDPMQAKLMWIMPLAFSVMFIFFP 534 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHG 561 AGL++YW +NV+SI QQ I K G Sbjct: 535 AGLVLYWITNNVLSIAQQWFINKRLG 560 >gi|91777106|ref|YP_546862.1| protein translocase subunit yidC [Methylobacillus flagellatus KT] gi|122399286|sp|Q1GXL6|OXAA_METFK RecName: Full=Inner membrane protein oxaA gi|91711093|gb|ABE51021.1| protein translocase subunit yidC [Methylobacillus flagellatus KT] Length = 552 Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 158/497 (31%), Positives = 251/497 (50%), Gaps = 43/497 (8%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 L + R+ ++ SI+ G L LR H D + L+ + Y A+ Sbjct: 71 LQSAERINVETDLYKASIDTIGGDLRRLELRE-HKDDEDQTKNFVLMDDQSAPMLYVAQT 129 Query: 125 DYVSTANNIELPNSNTVWNLISGKI-LTPTTP---IKLVFKNANNILFERTISLD-EHYL 179 + LP V+ S L P ++L +K N + + + + Y Sbjct: 130 GLIGNG----LPTHKEVFTSESTNYQLAPGEDKLDVRLTWKGDNGVEVHKIYTFRRDSYA 185 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV---QEGFIAVLGDKSLVEQKYSD 236 ++ + NNS + S +I+ H Q+ ++ + G DK + +SD Sbjct: 186 IEVSYEIRNNSDTAVDPSVYYQIV-HDNQSHQGSYMMPTFTGGAYYTEADK-YKKLSFSD 243 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + K+++S + S+ W+G+ Y+ S +IP K LSD Y + I Sbjct: 244 MAKTNLSK-NASDGWVGLVQHYFVSAWIPEDGLVREFYTKKLSDN--VYSIGSVSPLGNI 300 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG+S+T + L+AG P K +A P E +D+GW IA P+F ++S + Sbjct: 301 APGQSVTLKSRLYAG----PQTQSELKSVA-PGLEYTVDYGWLTVIATPLFWILSSIQKV 355 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 V N+G+AI+L T+ +KL+F+PL+ Y S ANM+ + P++ L+E++ Q L +AM+ Sbjct: 356 VHNWGVAIILLTILIKLVFYPLSAASYRSMANMRELAPRLQRLKEQYGDDR-QKLHQAMM 414 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 ++YKT INP+ GC PIL+QIPVF A+Y V+ S+EMRHAPF WI+DL+A D Sbjct: 415 EMYKTEKINPMGGCLPILVQIPVFIALYWVLLGSVEMRHAPFMLWIQDLSAVD------- 467 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 P+Y + PI+M ++M IQ K++P PAD QA ++ MP+VF FPA Sbjct: 468 ----PYY--------VLPILMGITMIIQTKLNPKPADPIQAKVMTIMPIVFSVFFFFFPA 515 Query: 537 GLIIYWSWSNVISIVQQ 553 GL++YW +N++SI QQ Sbjct: 516 GLVLYWLVNNILSIAQQ 532 >gi|198282181|ref|YP_002218502.1| 60 kDa inner membrane insertion protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665291|ref|YP_002424546.1| inner membrane protein, 60 kDa [Acidithiobacillus ferrooxidans ATCC 23270] gi|198246702|gb|ACH82295.1| 60 kDa inner membrane insertion protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517504|gb|ACK78090.1| inner membrane protein, 60 kDa [Acidithiobacillus ferrooxidans ATCC 23270] Length = 528 Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 172/568 (30%), Positives = 273/568 (48%), Gaps = 62/568 (10%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI-----QTVKQPNQVDNSYAAV-L 57 N +A+AL+V++ F ++ +E N + ++V P S A V + Sbjct: 3 NQKTILAVALAVVV------FLLFQAWQEQNAPKPAAGPAVSRSVTAPGATATSPAPVDV 56 Query: 58 IDDRAQAL--SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPS 114 + A L + V + G I+L G +L LR Y V +P L +P+ Sbjct: 57 VPASAGGLPPATGAAVSFQTQVFTGRISLNGGDIQNLGLRHYPQAVDDTAPYPLLDGAPA 116 Query: 115 --NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 + + F D + P T T PI L K A + E+T Sbjct: 117 RLTIQQSGFVSSDGQTLTARFAAPAGQT----------TAGQPIVLTGK-AGPLTVEKTW 165 Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 + + Y+ + T+TN+ S +I+R+ +T T+ F ++ + E Sbjct: 166 TFQPDSYVAEEHVTITNSGSAPWNGSYFDQILRND-RTETHMFMSIFTGAVLMHQGNFSE 224 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK-YLSDGHARYQAKFS 290 +SDI + W G+ D Y+ + +PS H+Q + Y Y A S Sbjct: 225 VSFSDIHDHPV--LKSGPGWAGMMDHYFLTAILPSA----HAQVQVYARPSGTNYVAGVS 278 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 T+ PG+S T T LF G K T+ + L E +D+GWF IA+PM +++ Sbjct: 279 TPLPTLAPGQSTTITQQLFLGPKRQQTLAAMGRGL-----EQTVDYGWFAIIAEPMHVVL 333 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++F+ LVGN+G+AI+L + VK +FF + Y S ANM+ +QPK+++L+++ Q Sbjct: 334 TWFHGLVGNWGLAIILLVIVVKSIFFYPSAISYRSMANMRKLQPKLEKLKQEVGDD-RQK 392 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 L AM++LY++ +NP+AGC PI+LQ+P F A+Y V+ S+ +R APF WI DLA DP Sbjct: 393 LGAAMMELYRSEKVNPMAGCLPIILQMPFFIALYWVLVESVSLRQAPFILWIHDLAIPDP 452 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I P++M +SMF Q +++P P D Q I++ +PVVF Sbjct: 453 YFIL-------------------PLLMGISMFFQQRLNPAPVDPMQKRIMSALPVVFAVF 493 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 S FPAGL++YW +NV+SI QQ +I + Sbjct: 494 FSFFPAGLVLYWLTNNVVSIGQQYLITR 521 >gi|156936084|ref|YP_001440000.1| putative inner membrane protein translocase component YidC [Cronobacter sakazakii ATCC BAA-894] gi|166975864|sp|A7MN02|OXAA_ENTS8 RecName: Full=Inner membrane protein oxaA gi|156534338|gb|ABU79164.1| hypothetical protein ESA_03978 [Cronobacter sakazakii ATCC BAA-894] Length = 550 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 140/505 (27%), Positives = 244/505 (48%), Gaps = 48/505 (9%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 + +K L +IN +G + L Y ++ S+ P L T N + ++ Sbjct: 61 ITVKTDVLSLTINTRGGDIEQALLLAYPKELGSSEPFQLL---ETTPNFVYQAQSGLTGR 117 Query: 131 NNIELPNSNTVWNLISGKILTPTTP-------IKLVFKNANNILFERTISLDE-HYLFKI 182 N + PN+N L + + T I + F + F +T +L Y + Sbjct: 118 NGPDNPNNNKGRPLYNTERDTYVLADGQDELVIPMTFTDEAGNAFTKTFALKRGQYAVYV 177 Query: 183 VDTVTNNSIDQIRFSPRGRIMR------HKPQTATNTFGVQ--EGFIAVLGDKSLVEQKY 234 V N + S G++ + H+ T ++ F + G D+ + K+ Sbjct: 178 GYDVKNAGTQPLEISSFGQLKQTIDLPSHR-DTGSSNFALHTFRGAAYSTPDEKYEKYKF 236 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 I N + W+ + +Y+A+ ++P+ + S F GH + + + Sbjct: 237 DTIADDENLNVNAKGGWVAMLQQYFATAWVPASNVT--SNFYTADLGHGVAAIGYKSEPV 294 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 + PG++ + L+ G P I +A P ++ +D+GW +FI++P+F L+ + + Sbjct: 295 QVQPGQTAKLASTLWVG----PEIQDKMAQVA-PHLDLTVDYGWLWFISQPLFKLLKWIH 349 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + +GN+G +I+ T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + Sbjct: 350 SFLGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKIQAMRERLGDD-KQRMSQE 408 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 409 MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD----- 463 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 P+Y I PI+M +MF KMSP D Q I+ +MPV+F Sbjct: 464 ------PYY--------ILPILMGATMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLW 509 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 510 FPSGLVLYYIVSNLVTILQQQLIYR 534 >gi|317494663|ref|ZP_07953075.1| membrane protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917265|gb|EFV38612.1| membrane protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 544 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 159/579 (27%), Positives = 277/579 (47%), Gaps = 75/579 (12%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S +I AWQ NN + QT Q N+ A D Sbjct: 4 QRNLLLIALLFVSFMIWQAWQT---------DNNPQPTAQTA---GQTANTTTA---DAS 48 Query: 62 AQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 +QA+ S + +L K L +IN +G + NL Y + S+ P L T + Sbjct: 49 SQAVPESGQGKLITVKTDVLSLTINTRGGDIEQANLLAYPATLGSDKPFELL---ETTPD 105 Query: 119 AYFAELDYVSTANNIELPNSN---------TVWNLISGKILTPTTPIKLVFKNANNILFE 169 + ++ N + P + T + L++G+ I L + + +++ Sbjct: 106 FIYQAQSGLTGKNGPDNPANGDRPLYTADQTNFELVNGQ---DELRIPLTYTAKDGVVYT 162 Query: 170 RTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGVQEGFIA 222 +T L Y + V N+S + + G++ +H+ T ++ F + A Sbjct: 163 KTFVLKRGDYAIGVDYKVKNSSAQPLDLTLFGQLKQSIDLPKHR-DTGSSNFALHTFRGA 221 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 QKY+ +K + N W+ + +Y+A+ +IP +T+ +QF + G+ Sbjct: 222 AYSSSDDKYQKYA-FDKDPL-NITTKGGWVAMLQQYFATAWIP--QTNSTNQFYTANLGN 277 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI--PRFEMLIDWGWFY 340 F + + PG L+ G P I + D+A P ++ +D+GW + Sbjct: 278 GLSAIGFKGEPVVVAPGTEKNLNATLWVG----PEI---QSDMAAVAPHLDLTVDYGWLW 330 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +R Sbjct: 331 FISQPLFKLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMR 390 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+R APF Sbjct: 391 ERIGDD-KQRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRQAPFAL 449 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI DLAA D P+Y I PI+M ++MF KMSP D Q I Sbjct: 450 WIHDLAAQD-----------PYY--------ILPILMGITMFFIQKMSPTTVTDPMQQKI 490 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 491 MTFMPVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 529 >gi|197286946|ref|YP_002152818.1| inner membrane protein translocase component YidC [Proteus mirabilis HI4320] gi|227354814|ref|ZP_03839231.1| Oxa1 family cytochrome oxidase biogenesis protein [Proteus mirabilis ATCC 29906] gi|194684433|emb|CAR46145.1| inner membrane protein [Proteus mirabilis HI4320] gi|227165132|gb|EEI49963.1| Oxa1 family cytochrome oxidase biogenesis protein [Proteus mirabilis ATCC 29906] Length = 546 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 145/501 (28%), Positives = 255/501 (50%), Gaps = 43/501 (8%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNAYFAELDYVST 129 + +K L IN +G D+ +L Y +++S +P L +P A + Sbjct: 63 ITVKTDVLDLRINTQGGTIDEADLLAYPAELNSKTPFRLLETTPQFLYQAQSGLIGPDGP 122 Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-----DEHYLFKIVD 184 S T I G+ + + F N + F +T L D +K+ + Sbjct: 123 DQKSRPVYSATQQEFILGEN-QDELRVPMTFVNEEGVKFVKTFILKKGQYDIGIEYKVEN 181 Query: 185 ----TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIE 238 T+T N Q++ S + + H+ T ++ F + A +KYS DIE Sbjct: 182 PTDKTLTMNFYGQLKQSVK--LPEHR-DTGSSNFALHTYRGAAYSSDETNYKKYSFGDIE 238 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 ++S +N W+ + +Y+A+ +IP+K++ ++ + D + + + IT+ P Sbjct: 239 DKNLS-ITTNNGWIAMLQQYFATAWIPAKDSQNNNFYSITLDNKSIALIGYKSAPITVAP 297 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 + T+ L+ G P I +A P ++ +D+GW +FI++P+F L+ + ++ +G Sbjct: 298 NSTQDITSTLWVG----PEIQSEMSAIA-PHLDLSVDYGWLWFISQPLFKLLKFLHSFIG 352 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G +I++ T V+ + +PL K QY S A M+ +QPK+ LRE+ Q + + M+ L Sbjct: 353 NWGFSIIMITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAALRERIGDD-KQRMSQEMMAL 411 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI+DL+A D Sbjct: 412 YKQEKVNPLGGCLPLIIQMPIFLALYYMLMGSVELRHAPFILWIQDLSAQD--------- 462 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 P+Y I P++M ++MFI K+SP D Q I+ +MPVVF FP+G Sbjct: 463 --PYY--------ILPLLMGVTMFIIQKLSPTAVTDPMQQKIMTFMPVVFTVFFLWFPSG 512 Query: 538 LIIYWSWSNVISIVQQAVIMK 558 L++Y+ SN+++I+QQ +I + Sbjct: 513 LVLYYIVSNLVTIIQQQLIYR 533 >gi|53802852|ref|YP_115424.1| inner membrane protein, 60 kDa [Methylococcus capsulatus str. Bath] gi|81680702|sp|Q602M6|OXAA_METCA RecName: Full=Inner membrane protein oxaA gi|53756613|gb|AAU90904.1| inner membrane protein, 60 kDa [Methylococcus capsulatus str. Bath] Length = 545 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 145/521 (27%), Positives = 249/521 (47%), Gaps = 40/521 (7%) Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 P + + + V + A S R+ + L I+ +G L+L Y + Sbjct: 48 PQRPSDDESDVTVHTEAPTQEGSRRIRVHTDVLSLEIDTRGGDLRQLDLLNYPVSKEQPD 107 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP----IKLVFK 161 V LL+ + + + A+ ++ A + PN +++W +G+ + L + Sbjct: 108 RPVRLLT--DQGDIFVAQSGFIGAAQQV--PNHHSLWQAEAGEYRLQDGQDILRVPLTWS 163 Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT---FGVQ 217 + + +T L YL + T+ N S ++ R +P +A Sbjct: 164 DGQGVTVTKTYILRRGSYLIDMEQTIDNRSNTNWTGRQYMQLQRKEPTSAQEDSQFIRTY 223 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 G + DKS + + D+ ++ + W+ + Y+ + ++P E K Sbjct: 224 TGGVLHTEDKSYEKIAFKDMASGNL-DAKSRQGWIAMIQHYFLAAWVPPAEDESTFYTKA 282 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 L+D A E+ G S T LFAG P + H + +A P E+ D+G Sbjct: 283 LADRVFVIGAYSPPAEVPA--GSSQTLKARLFAG----PKLQHVLEGIA-PGLELTADFG 335 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 IAKP++ L+ F+ N+G AI+ T+ +K LFF L++ Y S ANM+ +QPK+ Sbjct: 336 ILTVIAKPIYWLLETFHGFFNNWGWAIIFVTLVIKALFFKLSEASYRSMANMRKLQPKLV 395 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 EL+E++ + Q +AM++LY+ +NPL GC PIL+QIPVF ++Y V+ S+++R AP Sbjct: 396 ELKERYGEDR-QRYNQAMMELYRKEKVNPLGGCLPILVQIPVFISLYWVLVESVDLRQAP 454 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F W+ DL++ DP + P+IM +SMFIQ +++PPP D QA Sbjct: 455 FLLWLDDLSSKDPYFVL-------------------PLIMGVSMFIQQRLNPPPTDPIQA 495 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ + P+VF FP+GL++YW +N++SI+QQ I + Sbjct: 496 RVMQFFPLVFTVFFLFFPSGLVLYWVVNNILSIIQQWYITR 536 >gi|134297399|ref|YP_001121134.1| putative inner membrane protein translocase component YidC [Burkholderia vietnamiensis G4] gi|166975857|sp|A4JJ46|OXAA_BURVG RecName: Full=Inner membrane protein oxaA gi|134140556|gb|ABO56299.1| protein translocase subunit yidC [Burkholderia vietnamiensis G4] Length = 554 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 149/492 (30%), Positives = 240/492 (48%), Gaps = 43/492 (8%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D +TL + Y A + + PN N Sbjct: 91 GEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFD-HTAGHTYLARTGLLGG----DFPNHN 144 Query: 140 TVWNLISGKILTPT---TPIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSIDQI 194 V+ ++ + T +KL F++ + +T + VDT +N + Sbjct: 145 DVYTQLNPGATSLTGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDN-VGTA 203 Query: 195 RFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGD-KSLVEQKYSDIEKSSISNFHES-NS 250 +P + + TA T F+ AV D K + +SD++K+ + + N Sbjct: 204 PVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKINFSDLDKNKADYVNSADNG 263 Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W+ + Y+AS +IP + + + + Y+ I PG+S LFA Sbjct: 264 WVAMVQHYFASAWIPQQGVKRDIYAEKIDP--SLYRVGVKQPVAAIAPGQSADVQARLFA 321 Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 G +E + P E++ D+GW IAKP+F L+ + +VGN+G AI+L T+ Sbjct: 322 GPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGVVGNWGWAIVLLTIL 376 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT +NP GC Sbjct: 377 IKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNAALMELYKTEKVNPFGGC 435 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D PF+ Sbjct: 436 LPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRD-----------PFF------- 477 Query: 491 GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 I P++M++SM++Q ++P P D QA ++ +MP+ F FPAGL++Y+ +NV+SI Sbjct: 478 -ILPVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSI 536 Query: 551 VQQAVIMKMHGA 562 QQ I + G Sbjct: 537 AQQYYITRKLGG 548 >gi|158520119|ref|YP_001527989.1| 60 kDa inner membrane insertion protein [Desulfococcus oleovorans Hxd3] gi|158508945|gb|ABW65912.1| 60 kDa inner membrane insertion protein [Desulfococcus oleovorans Hxd3] Length = 559 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 170/568 (29%), Positives = 270/568 (47%), Gaps = 55/568 (9%) Query: 18 VYAWQNFYV------------------------YPRIEEMNNERKNIQTVKQPNQVDNSY 53 + WQ F++ P ++ R+N P QV + Sbjct: 17 LLVWQVFFIGSPEAPVRPDGAPVAPAQEAAAPPNPAAGDVALPREN----APPEQVTPAD 72 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 +A L+ A A + L +L G+ GA D L+ Y SP LLS Sbjct: 73 SA-LVPTEAPAAPVVVETGLYTVTLNGN----GAHISDFVLKNYRETNDPASPAKRLLSD 127 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN---ANNILFER 170 +N + + L+ + A P S V + G ++ P +VF ++ +R Sbjct: 128 NNPQGSLRVNLEGDTLAGMANGPYSADVAD---GPVVVSDQPRSVVFTRQFPGGRVVEKR 184 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 + Y+ + T+ N S + + + R+ T + V EG A++G L Sbjct: 185 YTFTPDSYMIDLAVTLKNGSETPLSGNLAVTLARYF--TDDGSRFVFEGPSALVG-HDLE 241 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 E K DI+K ++ S +W+ I ++Y+ S IP ET + + A + Sbjct: 242 EIKLGDIQKK--ASLTGSLAWISIQNRYFMSALIP--ETPTEAAMRLSRTPEQVVTATYL 297 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 A T+ + T +F G K + L + +++G+F FIA+P LM Sbjct: 298 APARTVGANSTETYRFSVFMGPKSVQILGRAGHAL-----DRAVNFGFFDFIARPCLWLM 352 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++ Y + N+GIAI++ T+ KL+F+PL K Y S A MK + P + E+REK+K ++ Sbjct: 353 NFLYRYIPNYGIAIIIITLLFKLVFWPLGNKSYKSMAEMKRLAPLMAEIREKYKDDRKKM 412 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 ++ M LY+T+ INPL GC PIL+QIPVFFA Y+++ ++E+RHAPF+GWI DL+A P Sbjct: 413 NEEVM-NLYRTYKINPLGGCLPILVQIPVFFAFYRMLYQAIELRHAPFFGWINDLSA--P 469 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 +F LP P + + + I+M +M IQ K+ PP D QA I+ MP+ F F Sbjct: 470 DRLFNFDVSLPLIAPP-VGIPVLTIVMGATMIIQQKLQPPMGDPTQAKIMMLMPIFFTFI 528 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +FP+GL++YW +N ISI QQ I + Sbjct: 529 FINFPSGLVLYWLVNNTISIFQQYYITR 556 >gi|30248404|ref|NP_840474.1| 60Kd inner membrane protein [Nitrosomonas europaea ATCC 19718] gi|34098399|sp|P59810|OXAA_NITEU RecName: Full=Inner membrane protein oxaA gi|30138290|emb|CAD84298.1| 60Kd inner membrane protein [Nitrosomonas europaea ATCC 19718] Length = 614 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 117/329 (35%), Positives = 188/329 (57%), Gaps = 28/329 (8%) Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 +SD++K+ + +N W+ + + Y+ + ++P ++T K SD Y A Sbjct: 260 FSDLDKNKADYPANANNGWIAMLEHYFLTAWLPQQQTPREFFAKRQSDNL--YSAGVIVP 317 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 I PG+ TT +AG +E + P ++ +D+GW IAKP+F L+S+ Sbjct: 318 AGVIAPGEIAATTMPFYAGPEEQDNLEGLA-----PGLDLTVDYGWLTVIAKPLFRLLSF 372 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +++ N+G+AI+L T+ VKLLFFPL+ Y S A ++ + PK+ +++++K Q + Sbjct: 373 YHSWTDNWGVAIILLTMTVKLLFFPLSAAGYRSMAKLRLVTPKLKRIQDQYKGD-RQRMH 431 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 +AM++ YK INP+ GC+PIL+QIPVF A+Y I ++E+R+AP WI DL++ D Sbjct: 432 QAMMEFYKEEKINPMGGCFPILVQIPVFIALYWTILAAVELRYAPLALWIDDLSSPD--- 488 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 PFY+ P++M +SMF+Q K++P P D QA I+ MPV F Sbjct: 489 --------PFYM--------LPLLMGISMFVQTKLNPTPTDPLQAKIMQIMPVAFSAIFF 532 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++Y +N++SI QQ I KM+G Sbjct: 533 FFPAGLVLYSLVNNILSIAQQWKITKMYG 561 >gi|330447273|ref|ZP_08310923.1| inner-membrane protein insertion factor [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491464|dbj|GAA05420.1| inner-membrane protein insertion factor [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 544 Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 151/500 (30%), Positives = 241/500 (48%), Gaps = 47/500 (9%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS-- 128 + +K L +++ G D L Y+ + S P V LLS +N + Y A+ + Sbjct: 66 ITIKTDVLELTVDTLGGDVVDAKLLKYNNTLGSKDPFV-LLSDTNGHD-YIAQSGLIGPN 123 Query: 129 ---TANNIELPNSNTVWNLISG----KILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 + N S T + + G ++ P T K + I + +T L + Sbjct: 124 GADSQQNGRAQYSVTAKDFVMGPEQNELRVPMTFTK------DGISYTKTFVLKRNDYAV 177 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS-DIEKS 240 VD N+ D+ +RHK + + + +KYS D K Sbjct: 178 NVDYTVANNTDKAASVQMYAQLRHKLSDSGGSLTMPTYLGGAYSANDTKYKKYSFDDMKD 237 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQ-FKYLSDGHARYQAKFSANEITILPG 299 + + W I Y+ S +IP SQ + S+G+ + T+ PG Sbjct: 238 KNLDVAANEGWAAIMQHYFVSAWIPRDGADQTSQVYSTTSNGNGYIGVRMPIE--TVAPG 295 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 +S L+ G K + K+L + +D+GW +FIA P+ L+S+ +++VGN Sbjct: 296 QSKEIKATLWVGPKLQNEMAATAKNL-----NLTVDYGWLWFIASPLHKLLSFIHSIVGN 350 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +GIAI++ T V+ +PL K QY S A M+ +QPKI +RE+ Q + + M++LY Sbjct: 351 WGIAIIVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDR-QRMSQEMMELY 409 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NPL GC PILLQ+P+F A+Y + S+E+RHAPF+GWI DL+A D Sbjct: 410 KKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHAPFFGWIHDLSAQD---------- 459 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538 P+Y + PI+M ++MF KMSP D Q I+ +MPV+F F FP+GL Sbjct: 460 -PYY--------VLPILMGITMFFIQKMSPSTVTDPMQQKIMTFMPVMFTFFFLFFPSGL 510 Query: 539 IIYWSWSNVISIVQQAVIMK 558 ++YW SN+++++QQ +I + Sbjct: 511 VLYWLVSNIVTLIQQTIIFR 530 >gi|149375641|ref|ZP_01893410.1| Preprotein translocase subunit YidC [Marinobacter algicola DG893] gi|149360043|gb|EDM48498.1| Preprotein translocase subunit YidC [Marinobacter algicola DG893] Length = 570 Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 133/423 (31%), Positives = 216/423 (51%), Gaps = 44/423 (10%) Query: 153 TTPIKLVFKNANNI------LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK 206 T + L F NN+ LF R + Y + + N S + + G+I+R + Sbjct: 178 TLTVDLTFTTDNNVEVTKQYLFSR-----DSYEIDVRYQINNQSDSVWQANMTGKIVRDQ 232 Query: 207 PQ--TATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASV 262 TA N+ G++ G + + + + D+ ++ I N +N WL Y+ + Sbjct: 233 APDPTAQNSLGIRAFLGMVVSSPEDPYEKFDFDDLSENPI-NQSVTNGWLAFLQHYFLAA 291 Query: 263 FIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 ++P ++ +QF+ G Y F + PG++ + + G K I E Sbjct: 292 WVPERDQP--AQFQSTRRG-PLYVMGFVYPATVVEPGQTSEVSAKAYVGPK---IIERLE 345 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 P + +D+G+ +FIA P+F+++ +F+ LVGN+G+AI+L TV VK +FF L+ Sbjct: 346 N--VAPNLDRTVDFGFLFFIALPLFIILDWFHGLVGNWGVAIILLTVLVKAVFFKLSATS 403 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y S A M+ + P++ L+E + Q + + M+ LYK INPL GC PIL+Q+PVF + Sbjct: 404 YRSMARMRAVAPQLTRLKELYGDD-RQRMSQEMMALYKREKINPLGGCLPILVQMPVFIS 462 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y V+ S+++RHAPF WI+DL+ DP I PI+M SM Sbjct: 463 LYWVLFESVQLRHAPFMLWIQDLSVMDPYFIL-------------------PILMGASMM 503 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +QM ++P P D QA I+ MP++F FPAGL++YW +N++SI QQ I + A Sbjct: 504 LQMSLNPTPPDPMQAKIMKLMPLIFTVFFLWFPAGLVLYWLVNNILSISQQWYITRKIEA 563 Query: 563 EIG 565 E+ Sbjct: 564 EVA 566 >gi|22127984|ref|NP_671407.1| putative inner membrane protein translocase component YidC [Yersinia pestis KIM 10] gi|45443732|ref|NP_995271.1| putative inner membrane protein translocase component YidC [Yersinia pestis biovar Microtus str. 91001] gi|51598232|ref|YP_072423.1| inner membrane protein translocase component YidC [Yersinia pseudotuberculosis IP 32953] gi|108810137|ref|YP_654053.1| putative inner membrane protein translocase component YidC [Yersinia pestis Antiqua] gi|108814119|ref|YP_649886.1| putative inner membrane protein translocase component YidC [Yersinia pestis Nepal516] gi|145601170|ref|YP_001165246.1| putative inner membrane protein translocase component YidC [Yersinia pestis Pestoides F] gi|150260964|ref|ZP_01917692.1| probable membrane protein [Yersinia pestis CA88-4125] gi|153949944|ref|YP_001403098.1| inner membrane protein translocase component YidC [Yersinia pseudotuberculosis IP 31758] gi|162421152|ref|YP_001608452.1| putative inner membrane protein translocase component YidC [Yersinia pestis Angola] gi|165926088|ref|ZP_02221920.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. F1991016] gi|165939954|ref|ZP_02228491.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. IP275] gi|166009619|ref|ZP_02230517.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. E1979001] gi|166213212|ref|ZP_02239247.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. B42003004] gi|167401618|ref|ZP_02307112.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422864|ref|ZP_02314617.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425533|ref|ZP_02317286.1| inner membrane protein OxaA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170026450|ref|YP_001722955.1| putative inner membrane protein translocase component YidC [Yersinia pseudotuberculosis YPIII] gi|186897490|ref|YP_001874602.1| putative inner membrane protein translocase component YidC [Yersinia pseudotuberculosis PB1/+] gi|218931078|ref|YP_002348953.1| putative inner membrane protein translocase component YidC [Yersinia pestis CO92] gi|229839809|ref|ZP_04459968.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841894|ref|ZP_04462050.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis biovar Orientalis str. India 195] gi|229896771|ref|ZP_04511934.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis Pestoides A] gi|229904659|ref|ZP_04519770.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis Nepal516] gi|270488370|ref|ZP_06205444.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Yersinia pestis KIM D27] gi|38503118|sp|Q8Z9U3|OXAA_YERPE RecName: Full=Inner membrane protein oxaA gi|21961130|gb|AAM87658.1|AE014013_3 60 kDa inner-membrane protein [Yersinia pestis KIM 10] gi|45438602|gb|AAS64148.1| probable membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51591514|emb|CAH23186.1| Oxa1 family transporter [Yersinia pseudotuberculosis IP 32953] gi|108777767|gb|ABG20286.1| protein translocase subunit yidC [Yersinia pestis Nepal516] gi|108782050|gb|ABG16108.1| protein translocase subunit yidC [Yersinia pestis Antiqua] gi|115349689|emb|CAL22670.1| probable membrane protein [Yersinia pestis CO92] gi|145212866|gb|ABP42273.1| protein translocase subunit yidC [Yersinia pestis Pestoides F] gi|149290372|gb|EDM40449.1| probable membrane protein [Yersinia pestis CA88-4125] gi|152961439|gb|ABS48900.1| inner membrane protein OxaA [Yersinia pseudotuberculosis IP 31758] gi|162353967|gb|ABX87915.1| inner membrane protein OxaA [Yersinia pestis Angola] gi|165912080|gb|EDR30720.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. IP275] gi|165921948|gb|EDR39125.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. F1991016] gi|165991541|gb|EDR43842.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. E1979001] gi|166205510|gb|EDR49990.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. B42003004] gi|166958256|gb|EDR55277.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049000|gb|EDR60408.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055547|gb|EDR65340.1| inner membrane protein OxaA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752984|gb|ACA70502.1| 60 kDa inner membrane insertion protein [Yersinia pseudotuberculosis YPIII] gi|186700516|gb|ACC91145.1| 60 kDa inner membrane insertion protein [Yersinia pseudotuberculosis PB1/+] gi|229678777|gb|EEO74882.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis Nepal516] gi|229691233|gb|EEO83286.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis biovar Orientalis str. India 195] gi|229696175|gb|EEO86222.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700209|gb|EEO88245.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis Pestoides A] gi|270336874|gb|EFA47651.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Yersinia pestis KIM D27] gi|320017432|gb|ADW01004.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 546 Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 152/520 (29%), Positives = 261/520 (50%), Gaps = 53/520 (10%) Query: 59 DDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDV-SSNSPIVTLLSPS 114 D +QA+ S + +L K L +IN +G + NL Y + SSN+ + +PS Sbjct: 46 DKASQAVPGSGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDTLGSSNTFELLETTPS 105 Query: 115 ---NTKNAYFAELDYVSTANN----IELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 ++ + + AN E+P ++ V L G+ I L F + + + Sbjct: 106 FVYQAQSGLTGKNGPDNPANGDRPLFEVPQTSFV--LADGQ---DELRIPLTFTSKDGSV 160 Query: 168 FERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFI 221 F +T L + Y + V N S + + G++ + K T +N F +Q Sbjct: 161 FIKTFVLKRNDYAIGVDYHVNNASAAPLELTLFGQLKQSINLPKKRDTGSNNFALQTYRG 220 Query: 222 AVLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 A +KYS DIE ++ + W+ + +Y+A+ +IP+ + + F Sbjct: 221 AAYSSDETKYKKYSFSDIEDKNL-DITTKGGWVAMLQQYFATAWIPAANET--NTFYSAE 277 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G+ F + I PG+ + L+ G P I + ++A P ++ +D+GW Sbjct: 278 LGNGLAAIGFKGAPVVIQPGEQKQLSATLWVG----PEIQNKMAEIA-PHLDLTVDYGWL 332 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ + Sbjct: 333 WFISQPLFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAM 392 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF Sbjct: 393 RERIGDD-KQRMSQEMMALYKAEKVNPLGGCLPLIIQMPIFLALYYMLMSSVELRHAPFI 451 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAM 518 WI DL+A D P+Y I PI+M ++M+ KMSP D Q Sbjct: 452 LWIHDLSAQD-----------PYY--------ILPILMGITMYFIQKMSPTTVTDPMQQK 492 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ +MPV+F FPAGL++Y+ SN+++I+QQ +I + Sbjct: 493 IMTFMPVIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 532 >gi|322835122|ref|YP_004215149.1| membrane protein insertase, YidC/Oxa1 family domain containing [Rahnella sp. Y9602] gi|321170323|gb|ADW76022.1| membrane protein insertase, YidC/Oxa1 family domain containing [Rahnella sp. Y9602] Length = 544 Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 150/575 (26%), Positives = 263/575 (45%), Gaps = 67/575 (11%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ-VDNSYAAVLIDD 60 +RN + +S +I AWQ + + + N NQ V +S LI Sbjct: 4 QRNLFLIALLFVSFMIWQAWQTDHAPQPANQTTQQTANTANGDATNQAVPDSGQGKLITV 63 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + LS++ IN +G + L+ Y + S+ P L T N Sbjct: 64 NSDVLSLT-------------INTRGGDIEQALLKAYPTTLGSDQPFQLL---ETTPNFL 107 Query: 121 FAELDYVSTANNIELPN---------SNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + ++ N + P S+ + + G+ I + + AN ++ +T Sbjct: 108 YQAQSGLTGKNGPDNPANGERPLFKASSDTFTMAEGQ---SELRIPMTYTAANGAIYTKT 164 Query: 172 ISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGVQEGFIAVL 224 + Y + + N + + + G++ +H+ T +N F + A Sbjct: 165 FVIKRGSYAVNVEYNINNTTAAPLELTMFGQLKQTTELPKHR-DTGSNNFALHTFRGAAY 223 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 QKY+ +KS N W+ + +Y+A+ +IPS + + + Sbjct: 224 SSSDDKYQKYA-FDKSEALNVTTQGGWVAMLQQYFATAWIPSAKDTNTFFTTTNN---GI 279 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 F T+ PG + L+ G P I +A P ++ +D+GW +FI++ Sbjct: 280 STIGFKGTPFTVAPGAQQQVASILWVG----PEIQDKMAAIA-PHLDLTVDYGWLWFISQ 334 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + VGN+G +I++ T V+ + +PL + QY S A M+ +QPK+ +RE+ Sbjct: 335 PLFKLLKFIQGFVGNWGFSIIVITFIVRGIMYPLTRAQYTSMAKMRMLQPKLAAMRERIG 394 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI D Sbjct: 395 DD-KQRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLSGSIELRHAPFILWIHD 453 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+A D P+Y I P++M ++MF KMSP D Q I+ +M Sbjct: 454 LSAQD-----------PYY--------ILPVLMGITMFFIQKMSPTTVTDPMQQKIMTFM 494 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 PV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 495 PVIFTVFFLWFPSGLVVYYIVSNLVTILQQQLIYR 529 >gi|237801668|ref|ZP_04590129.1| membrane protein insertase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024527|gb|EGI04583.1| membrane protein insertase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 562 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 117/323 (36%), Positives = 184/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K I + W+ Y+ + +IP + Q + D Y F++ +T Sbjct: 257 DIDKGQIKETVQGG-WVAWLQHYFVTAWIPDHNATNSVQTR--KDSQGNYIIGFTSPTLT 313 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG T+ L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 314 VAPGAQGETSATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 368 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 369 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLAVLKEQHGDDR-QKMSQAM 427 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ D Sbjct: 428 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKD------ 481 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 PF+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 482 -----PFF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKLMPIIFTFFFLWFP 528 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQA I + Sbjct: 529 AGLVLYWVVNNTLSIAQQAYITR 551 >gi|213968445|ref|ZP_03396588.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato T1] gi|301384267|ref|ZP_07232685.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. tomato Max13] gi|302131966|ref|ZP_07257956.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926733|gb|EEB60285.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato T1] gi|330876349|gb|EGH10498.1| membrane protein insertase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 562 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 117/323 (36%), Positives = 184/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K I + W+ Y+ + +IP + Q + D Y F++ ++ Sbjct: 257 DIDKGQIKE-NVQGGWVAWLQHYFVTAWIPDHNVTNAVQTR--KDSQGNYIIGFTSPTLS 313 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG TT L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 314 VAPGAQGETTATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 368 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 369 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLAVLKEQHGDDR-QKMSQAM 427 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 428 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKDP----- 482 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 F+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 483 ------FF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 528 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQA I + Sbjct: 529 AGLVLYWVVNNTLSIAQQAYITR 551 >gi|331017731|gb|EGH97787.1| membrane protein insertase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 562 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 117/323 (36%), Positives = 184/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K I + W+ Y+ + +IP + Q + D Y F++ ++ Sbjct: 257 DIDKGQIKE-NVQGGWVAWLQHYFVTAWIPDHNVTNAVQTR--KDSQGNYIIGFTSPTLS 313 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG TT L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 314 VAPGAQGETTATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 368 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 369 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLAVLKEQHGDDR-QKMSQAM 427 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 428 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKDP----- 482 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 F+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 483 ------FF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 528 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQA I + Sbjct: 529 AGLVLYWVVNNTLSIAQQAYITR 551 >gi|330964185|gb|EGH64445.1| membrane protein insertase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 562 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 117/323 (36%), Positives = 184/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K I + W+ Y+ + +IP + Q + D Y F++ ++ Sbjct: 257 DIDKGQIKE-NVQGGWVAWLQHYFVTAWIPDHNATNAVQTR--KDSQGNYIIGFTSPTLS 313 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG TT L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 314 VAPGAQGETTATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 368 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 369 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLAVLKEQHGDDR-QKMSQAM 427 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 428 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKDP----- 482 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 F+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 483 ------FF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 528 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQA I + Sbjct: 529 AGLVLYWVVNNTLSIAQQAYITR 551 >gi|78224744|ref|YP_386491.1| protein translocase subunit yidC [Geobacter metallireducens GS-15] gi|123570635|sp|Q39PQ8|OXAA_GEOMG RecName: Full=Inner membrane protein oxaA gi|78195999|gb|ABB33766.1| protein translocase subunit yidC [Geobacter metallireducens GS-15] Length = 536 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 121/330 (36%), Positives = 187/330 (56%), Gaps = 29/330 (8%) Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 L E+K D+ S + + W G +DKY+ S + + + + S + Sbjct: 228 LTEEKVKDLVGQGKS--YSAPLWSGFADKYFLSAVVGQGGSIATAAVR--STPRGMLEDT 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 +A E ++ PG+S + L+ G K+ + L E ID GWF +AKP+ Sbjct: 284 ITAPETSLNPGESKSVAYRLYFGPKDLDILKAQGNSL-----ERAIDLGWFAMLAKPLLH 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 + +FY V N+GIAI++ TV +K++F+PL Y S M+ +QPK+ E+REK+K Sbjct: 339 SLKFFYKYVHNYGIAIIIITVILKIIFYPLTHSSYKSMKQMQKLQPKMQEVREKYKNDR- 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + KA+++LY+TH +NP+ GC P+L+QIPVFFA+YK + S+E+RHAPF WI+DLA Sbjct: 398 DAMNKAIMELYQTHKVNPVGGCLPMLVQIPVFFALYKALMFSIELRHAPFMLWIQDLAGK 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 D P+Y + PIIM ++M IQ KM+P D Q ++ +PVVF Sbjct: 458 D-----------PYY--------VTPIIMGITMVIQQKMTPSQMDPMQQKMMMALPVVFT 498 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F +FP+GL++YW +NV++I+QQ+ I K Sbjct: 499 FMFLNFPSGLVLYWLVNNVLTIIQQSYINK 528 >gi|149190488|ref|ZP_01868759.1| putative inner membrane protein translocase component YidC [Vibrio shilonii AK1] gi|148835742|gb|EDL52708.1| putative inner membrane protein translocase component YidC [Vibrio shilonii AK1] Length = 540 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 131/406 (32%), Positives = 212/406 (52%), Gaps = 42/406 (10%) Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEG 219 AN I + +T L +Y + V NNS F + ++ + + + T G Sbjct: 158 EANGISYTKTFILKRGNYAIDVEYDVDNNSGQNATFGMYAHLRQNLQDKGGSITMPTYNG 217 Query: 220 FIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKE--TSFHSQ-F 275 D + + D++ ++S N + W + Y+A+ +IP + T+ +++ Sbjct: 218 GAYSTQDVRYKKYSFEDMQDRNLSLNLTDGQGWAAMIQHYFAAAWIPREAPGTNLYTRVI 277 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA--IPRFEML 333 L D R TI G+S T L+AG K +K +A P +++ Sbjct: 278 GNLGDIGVRMP------NATIADGQSATLKATLWAGPK-------LQKQMAETAPNLDLV 324 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+GW +FIAKP+ L+S+ +V N+G+AI+ T V+ +PL K QY S A M+ +Q Sbjct: 325 VDYGWLWFIAKPLHTLLSFIQGIVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQ 384 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ +RE+ Q + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+ Sbjct: 385 PKLQAMRERIGDDR-QRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVEL 443 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512 RH+PF+GWI DL+A D P+Y I P++M SMF+ KMSP Sbjct: 444 RHSPFFGWIHDLSAQD-----------PYY--------ILPLLMGASMFLIQKMSPTTVT 484 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I + Sbjct: 485 DPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYR 530 >gi|149911783|ref|ZP_01900387.1| Putative inner membrane protein, 60 kDa [Moritella sp. PE36] gi|149805129|gb|EDM65151.1| Putative inner membrane protein, 60 kDa [Moritella sp. PE36] Length = 547 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 132/425 (31%), Positives = 227/425 (53%), Gaps = 44/425 (10%) Query: 145 ISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM 203 ISG L+ I L + +AN + F + +L +Y + + N S + I G++ Sbjct: 145 ISGDTLS----IPLSYTDANGVEFTKIFTLTRGNYDVDVSYKINNQSANAISVQMYGQLK 200 Query: 204 RH--KPQTATNTFGVQEGFIAVLG--DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYW 259 ++ + ++ +Q A LG DK + + DI +++S + W+G+ Y+ Sbjct: 201 QNIDLSEDTGSSMMMQAYRGAALGTTDKRYEKYDFDDISDANLSR-TTTAGWVGMLQHYF 259 Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI---LPGKSITTTNFLFAGAKEF- 315 S +IP + F L+ G + F+ + I P ++I + AK + Sbjct: 260 VSAWIPGNS---QNHFYTLNIG----RTDFTQGQAIIGFKQPVEAIAANSETTISAKLWL 312 Query: 316 -PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374 P + +L + ++ +D+ W +FIA+P+F L+ +F+ LVGN+GIA+++ T V+ Sbjct: 313 GPKLQDQMGEL-VEGLDLTVDYSWLWFIAQPLFQLLQFFHGLVGNWGIAVIMITFTVRGA 371 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 +PL K QY S A M+ +QPK+ LREK Q + ++M+ LYK +NPL GC+P++ Sbjct: 372 MYPLTKAQYTSMAKMRLLQPKLTALREKCGDD-KQKMSQSMMALYKEEKVNPLGGCFPMI 430 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+F ++Y + S+E+RHAPF WI DL+A D P+Y + P Sbjct: 431 IQMPIFISLYWALMESVELRHAPFALWINDLSAQD-----------PYY--------VLP 471 Query: 495 IIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++M ++M++ KMSP D Q ++ +MPV+F F FPAGL++YW SNV++I+QQ Sbjct: 472 LLMGVTMYMIQKMSPTQVQDPMQQKVMQFMPVMFTFFFLWFPAGLVLYWLMSNVVTIIQQ 531 Query: 554 AVIMK 558 +I + Sbjct: 532 TIIFR 536 >gi|171464337|ref|YP_001798450.1| 60 kDa inner membrane insertion protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|254773010|sp|B1XSN7|OXAA_POLNS RecName: Full=Inner membrane protein oxaA gi|171193875|gb|ACB44836.1| 60 kDa inner membrane insertion protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 557 Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 164/538 (30%), Positives = 267/538 (49%), Gaps = 53/538 (9%) Query: 43 VKQPNQVDN--SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 V P Q+ S AA I + A+ + + L+N L+ I+ GA D L Sbjct: 53 VDVPTQISGAPSVAATPIIN-GGAIESAEKFTLQNDVLVLEISASGANVIDAKL--LKSL 109 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 + N P V L + T + YFA VS NN +LPN + + L+ P + Sbjct: 110 TAENKP-VELFQYTPT-HKYFARSGLVSLNNN-DLPNHTSTFKLVQSGKDGSGRPFAVFA 166 Query: 161 KNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT---------- 209 N + E+T L+ Y+ + VT ++ + I+R Q Sbjct: 167 SERNGVRLEKTFILNPGSYVVDVGHRVTQSTSNPNPLVLYTEIVRDASQEQKIGPFGGAF 226 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS----NFHESNSWLGISDKYWASVFIP 265 + NTF G +A + + ++S I+K+ I+ +W+ + Y+AS +IP Sbjct: 227 SANTF---TGPVAYTDKEKFNKLEFSAIDKNKITIPTLVAAGEPAWIAMVQHYFASAWIP 283 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + + + +G R + + PG ++ LF G +E + + Sbjct: 284 GDKVARDIYTGRIDNGLYRIGMQTPLGMVG--PGSTVVEKAKLFVGPQEERVL-----ET 336 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 P FE+L D+G+ +AKP+F L+ + VGN+G +I+L T+ +KL+FFPL+ Y S Sbjct: 337 IAPGFELLKDYGYLTILAKPIFWLLDNIHFYVGNWGWSIILLTILIKLVFFPLSAASYKS 396 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A MK +QP++ ++E++K PQ L +AM+++Y+ INPL GC P+++QIPVF ++Y Sbjct: 397 MARMKEVQPRLVAMKEQYKGE-PQKLNQAMMEMYRKEKINPLGGCLPVVIQIPVFISLYW 455 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 V+ S+E R AP+ WI DL+ D P+Y I P+IM++SMF+Q Sbjct: 456 VLLSSVETRGAPWILWIHDLSVPD-----------PYY--------ILPVIMAVSMFVQT 496 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K++P P D QA ++ +MP+VF FPAGL++YW +N++SI QQ I +M G + Sbjct: 497 KLNPTPPDPIQAKVMMYMPIVFSVMFFFFPAGLVLYWVVNNLLSIAQQWQINQMFGKK 554 >gi|116750023|ref|YP_846710.1| 60 kDa inner membrane insertion protein [Syntrophobacter fumaroxidans MPOB] gi|166977422|sp|A0LLH3|OXAA_SYNFM RecName: Full=Inner membrane protein oxaA gi|116699087|gb|ABK18275.1| protein translocase subunit yidC [Syntrophobacter fumaroxidans MPOB] Length = 553 Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 114/333 (34%), Positives = 185/333 (55%), Gaps = 25/333 (7%) Query: 233 KYSDIEKSSISNFHESN------------SWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + +EK S+ NF + +W+ + ++ + IP E + + L Sbjct: 227 QLTTLEKGSLKNFTTKDLSKSDLVLKPPMTWVAYENNFFINAIIPVAEGGYQFVPRILDA 286 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Q + + + ++ + + G KE T+ E LA +D+GWF Sbjct: 287 TKGLLQLVYLTDPFQLEGNETKSFKLRFYIGPKELSTLARAEHQLA-----SAVDYGWFT 341 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIAKP+ ++ +FY N+G+AI+L T+ +K+LF+PL +K Y S MK IQPK+ ++R Sbjct: 342 FIAKPLVYVLDWFYRYTHNWGVAIILLTIVIKILFWPLTQKSYQSMQKMKKIQPKMTQIR 401 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K ++ Q+ M LY+T+ +NP+ GC P+LLQIPVFFA+Y++++ ++E+RH PF Sbjct: 402 EKYKGDREKMNQELM-GLYRTYKVNPMGGCLPMLLQIPVFFALYRMLNGAVELRHEPFML 460 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL A D I F +P + + ++M ++MFIQ KM+P D Q I+ Sbjct: 461 WIDDLTAPDRLPIG-------FDIPYLGGLPVLTLLMGITMFIQQKMTPSAGDPRQDQIM 513 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MPV+F +FP+GL++YW +NV+SI QQ Sbjct: 514 MIMPVMFTVFFVNFPSGLVLYWLVNNVLSIAQQ 546 >gi|291285982|ref|YP_003502798.1| membrane protein insertase, YidC/Oxa1 family [Denitrovibrio acetiphilus DSM 12809] gi|290883142|gb|ADD66842.1| membrane protein insertase, YidC/Oxa1 family [Denitrovibrio acetiphilus DSM 12809] Length = 509 Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 163/572 (28%), Positives = 277/572 (48%), Gaps = 84/572 (14%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N N +AI LS +++ A+Q F+ P+ N +++ QT DN V ++D AQ Sbjct: 2 NKNTVLAIGLSALVILAFQVFFA-PKPTVQNQVQQSAQTE------DNKGQIVPVED-AQ 53 Query: 64 ALSMSPRVELKNPSLIGSINLKGAQF------DDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 +++ + P ++ + ++ + N+R ++ + + + S Sbjct: 54 PITIEEQTAQTEPMILETFDVLTDNVRYVFNANTGNIREAVINSYHSRDLTNVGFKSVNG 113 Query: 118 NAYFAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 + FA++ ++S ++++ N TT + + ++ ++ + D+ Sbjct: 114 DVVFADVPFISAYTSDVQKTNG--------------TTTVTFSGSQGDIVVTKKYVINDD 159 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA---------VLGDK 227 YL K + V NN+ D+ + P T+ +GF + + K Sbjct: 160 SYLVK-GELVLNNTGDRTV---------NVPLTSGIGANAVDGFESDRYSFQGPLMFDGK 209 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 L ++K ++KS + + + W+G KY F+ + + G A+ Sbjct: 210 RLKKEKAEKVDKSIVVDHPK---WVGYMSKY----FMIGVAQDYSKGTISPAGGSAKITG 262 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + ++ + P T LFAG KE+ + Y DL + E ID+G F FIA PM Sbjct: 263 ---SADMKLNPDARETVEFSLFAGPKEYDLLKSY--DL---KLEKSIDFGIFSFIAIPML 314 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 + Y+ V N+G+AI+L T+ +K+L FPL +K VS M ++QPK+ E++EKFK Sbjct: 315 KFLKIIYSYVHNYGVAIILLTLVIKILTFPLTQKSMVSMKKMSSLQPKMLEIKEKFKGDK 374 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + A ++LYK +NPL GC P++LQIP+FFA+YK + +++E++ APF WI DL+ Sbjct: 375 EKT-NAATMELYKNEGVNPLGGCLPMVLQIPIFFALYKTLLLAIELQGAPFMLWITDLSL 433 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVV 526 D P+Y I PI+M SMF+Q KM+P A D Q I +MP++ Sbjct: 434 KD-----------PYY--------ISPILMGASMFLQQKMTPSTAQDPLQQKIFTFMPLI 474 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F F +FPAGL++YW +NV+SI QQ I K Sbjct: 475 FTFLFLTFPAGLVVYWLTNNVLSIAQQYFINK 506 >gi|294505626|ref|YP_003569688.1| membrane protein [Yersinia pestis Z176003] gi|262363791|gb|ACY60512.1| membrane protein [Yersinia pestis D106004] gi|262367727|gb|ACY64284.1| membrane protein [Yersinia pestis D182038] gi|294356085|gb|ADE66426.1| membrane protein [Yersinia pestis Z176003] Length = 529 Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 152/520 (29%), Positives = 261/520 (50%), Gaps = 53/520 (10%) Query: 59 DDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDV-SSNSPIVTLLSPS 114 D +QA+ S + +L K L +IN +G + NL Y + SSN+ + +PS Sbjct: 29 DKASQAVPGSGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDTLGSSNTFELLETTPS 88 Query: 115 ---NTKNAYFAELDYVSTANN----IELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 ++ + + AN E+P ++ V L G+ I L F + + + Sbjct: 89 FVYQAQSGLTGKNGPDNPANGDRPLFEVPQTSFV--LADGQ---DELRIPLTFTSKDGSV 143 Query: 168 FERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFI 221 F +T L + Y + V N S + + G++ + K T +N F +Q Sbjct: 144 FIKTFVLKRNDYAIGVDYHVNNASAAPLELTLFGQLKQSINLPKKRDTGSNNFALQTYRG 203 Query: 222 AVLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 A +KYS DIE ++ + W+ + +Y+A+ +IP+ + + F Sbjct: 204 AAYSSDETKYKKYSFSDIEDKNL-DITTKGGWVAMLQQYFATAWIPAANET--NTFYSAE 260 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G+ F + I PG+ + L+ G P I + ++A P ++ +D+GW Sbjct: 261 LGNGLAAIGFKGAPVVIQPGEQKQLSATLWVG----PEIQNKMAEIA-PHLDLTVDYGWL 315 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ + Sbjct: 316 WFISQPLFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAM 375 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF Sbjct: 376 RERIGDD-KQRMSQEMMALYKAEKVNPLGGCLPLIIQMPIFLALYYMLMSSVELRHAPFI 434 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAM 518 WI DL+A D P+Y I PI+M ++M+ KMSP D Q Sbjct: 435 LWIHDLSAQD-----------PYY--------ILPILMGITMYFIQKMSPTTVTDPMQQK 475 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ +MPV+F FPAGL++Y+ SN+++I+QQ +I + Sbjct: 476 IMTFMPVIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 515 >gi|317401604|gb|EFV82230.1| inner membrane protein oxaA [Achromobacter xylosoxidans C54] Length = 561 Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 139/480 (28%), Positives = 235/480 (48%), Gaps = 38/480 (7%) Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145 GAQ L Y ++ P V LL + N Y A+ V AN P T + ++ Sbjct: 101 GAQLVRAELLKYPATGQADKPTV-LLDRTAGLN-YVAQTGVVGAANGQNFPTHQTPFRVV 158 Query: 146 SGKILTPTTPIKLVFK-NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM 203 S + + F+ + + +T +L Y + + N + + ++ Sbjct: 159 STDRQMTGDSLAVAFEAESGGVKVTKTFTLHRGRYDIDVRHDLANVGAAPVTPALYLQLE 218 Query: 204 R--HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWA 260 R + P ++ + G + ++DIEK + ++ N W+ + Y+A Sbjct: 219 RDGNDPADTSSFYHTFTGMAVYSEQDKFQKMTFADIEKKKANYIKQADNGWIAVVQHYFA 278 Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 + ++P + +++ L Y A+ I PG + + L+ G ++ Sbjct: 279 TAWVPPQGKPRNNEV--LEVQKNLYAARTIEAVGEIAPGAAARVDSHLWVGPQD------ 330 Query: 321 YEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 +K +A P E+++D+GW IAKP+F LM++ ++++GN+G I+ TV +K LF+PL Sbjct: 331 -QKAMAALAPGLELVVDYGWLTIIAKPLFTLMTWLHSILGNWGWTIVALTVLIKALFYPL 389 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 A Y S A MK + P++ L+EK+ Q L AM+++Y+T INPL GC P+++QIP Sbjct: 390 AAASYRSMARMKQVAPRLQALKEKYGDD-KQKLNAAMMEMYRTEKINPLGGCLPMVVQIP 448 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 VF ++Y V+ S+EMR AP+ W+ DL+ DP I P IM Sbjct: 449 VFISLYWVLLASVEMRGAPWILWVHDLSIRDPYFIL-------------------PAIMM 489 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MF+Q+K++P P D QA ++ MP+VF + FPAGL++YW +N +SI QQ I + Sbjct: 490 ATMFLQIKLNPTPPDPVQAKVMMIMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWSITR 549 >gi|254496743|ref|ZP_05109602.1| inner membrane protein, 60 kDa [Legionella drancourtii LLAP12] gi|254354038|gb|EET12714.1| inner membrane protein, 60 kDa [Legionella drancourtii LLAP12] Length = 558 Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 162/580 (27%), Positives = 272/580 (46%), Gaps = 69/580 (11%) Query: 11 IALSVIIVYAWQNFYV-YPRIEEMNNERKNIQTVKQP-----NQVDNSYAAVLIDDRAQA 64 +AL+++ + W + V YP + N Q +P NS A L++ A+ Sbjct: 10 MALALVSLSLWNAWQVDYPPQQTTVANSSNQQRTDEPLLPEMGTSGNSAGATLVNPVAEQ 69 Query: 65 LSM--SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTK---- 117 +P V++K L +I+L+ L Y L V N P L +N + Sbjct: 70 TRTQSAPLVQVKTDVLNVAIDLQQGDIVSGQLLDYPLSVDEKNKPFPLLQDDANERYVAN 129 Query: 118 -NAYFAE------LDYVSTANNIE---LPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 N + A LD+ T + N N + ++GK + +F + Sbjct: 130 SNLFIAAGQAVKALDFAFTTEQPQYELAANQNQLVVTLNGKEDDLAVSKEFIFTKGS--- 186 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP-QTATNTFGVQEGFIAVL-- 224 YL + + N + + +++R P + ++ F V A Sbjct: 187 ----------YLIDVNYKIVNKGSSEWKGYMNTQLLRSSPKEDKSSVFHVGSYTGASYSE 236 Query: 225 -GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 G + +SD+ K+++ + + W+ + Y+ S +IP + ++F Y + Sbjct: 237 PGKHHYQKVSFSDMGKANL-DVDSNGGWIAMQQHYFLSAWIPDAQG--RNKF-YTRSING 292 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y + I + P + T L+ G P I K +A P ++ +D+G +F++ Sbjct: 293 DYTIGAVSQPIVVQPQEQKTVGAKLYVG----PEITSVLKGIA-PSLDLTVDYGILWFVS 347 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +F LM + YN+VGN+G +I+L TV +KL F+ L+ Y S A M+ +QPK+ LRE++ Sbjct: 348 SLLFSLMKWIYNVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMAGMRKLQPKLQALRERY 407 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 ++ Q M +LYK +NPL GC PI++QIPVF A+Y V+ S+E+R APF WIK Sbjct: 408 GDDKAKISQATM-ELYKQEKVNPLGGCLPIVIQIPVFIALYWVLLESVELRQAPFIFWIK 466 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DLA+ADP ++ P+IM +M IQ K++P P D QA ++ ++ Sbjct: 467 DLASADPFHVL-------------------PLIMGATMLIQQKLNPAPPDPMQAKVMMFL 507 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 PV+F +FPAGL++YW +N +SI+QQ I + + E Sbjct: 508 PVLFTGLFWNFPAGLVLYWIVNNTLSILQQWYITRKYADE 547 >gi|221214579|ref|ZP_03587549.1| inner membrane protein OxaA [Burkholderia multivorans CGD1] gi|221165469|gb|EED97945.1| inner membrane protein OxaA [Burkholderia multivorans CGD1] Length = 544 Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 150/497 (30%), Positives = 240/497 (48%), Gaps = 53/497 (10%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D +TL + Y A + + PN N Sbjct: 81 GEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFD-HTAGHTYLARTGLLGG----DFPNHN 134 Query: 140 TVWNLISGKILTPTT------PIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSI 191 V+ ++ PT+ +KL F++ + +T + VDT +N + Sbjct: 135 DVYTQVNAG---PTSLSGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDN-V 190 Query: 192 DQIRFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGD-KSLVEQKYSDIEKSSISNFHES 248 +P + + TA T F+ AV D K + +SD++K+ + Sbjct: 191 GTTPVTPTLYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKINFSDLDKNKADYVTSA 250 Query: 249 -NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 N W+ + Y+AS +IP + + + + Y+ I PG+S+ Sbjct: 251 DNGWIAMVQHYFASAWIPQQGVKRDIYAEKIDP--SLYRVGVKQPVAAIAPGQSVDVQAR 308 Query: 308 LFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 LFAG +E E+ L P E++ D+GW IAKP+F L+ ++ VGN+G AI+ Sbjct: 309 LFAGPEE-------ERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGWAIV 361 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 L T+ +K +FFPL+ Y S A MK I P++ LRE+FK PQ + A+++LYKT +N Sbjct: 362 LLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKND-PQKMNAALMELYKTEKVN 420 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 421 PFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFIL----------- 469 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 P++M++SM++Q ++P P D QA ++ +MP+ F FPAGL++Y+ + Sbjct: 470 --------PVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVN 521 Query: 546 NVISIVQQAVIMKMHGA 562 NV+SI QQ I + G Sbjct: 522 NVLSIAQQYYITRKLGG 538 >gi|330961501|gb|EGH61761.1| membrane protein insertase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 562 Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 116/323 (35%), Positives = 185/323 (57%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K I + W+ Y+ + +IP + +Q + D Y F++ ++ Sbjct: 257 DIDKGQIKETVQGG-WVAWLQHYFVTAWIPDHNAT--NQVQTRKDSQGNYIIGFTSPTLS 313 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG T+ L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 314 VAPGAQGETSATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 368 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 369 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLKEQHGDDR-QKMSQAM 427 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ D Sbjct: 428 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKD------ 481 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 PF+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 482 -----PFF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKLMPIIFTFFFLWFP 528 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQA I + Sbjct: 529 AGLVLYWVVNNTLSIAQQAYITR 551 >gi|253991870|ref|YP_003043226.1| inner membrane protein translocase component YidC [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783320|emb|CAQ86485.1| similar to 60 kda inner-membrane protein yidc of escherichia coli [Photorhabdus asymbiotica] Length = 546 Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 149/530 (28%), Positives = 256/530 (48%), Gaps = 45/530 (8%) Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDV 101 QP V + + QA+ S + +L K L +IN +G ++ +L Y + Sbjct: 30 QPTTVQATQQTDMPSGENQAVPGSGKGKLITVKTDVLSLTINTRGGDIEEADLLAYPDTL 89 Query: 102 SSNSPIVTL-LSPSNTKNAY--FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 SN P L +P+ T A D N E P T + I L Sbjct: 90 GSNQPFKLLETTPAFTYQAQSGLTGKDGPDNPTNSERPLYTTAQDSYVLDNGQDELRIPL 149 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ-IRFSPRGRIM------RHKPQTAT 211 F + +++ +T L VD +N+ ++ ++ + G++ +H+ T + Sbjct: 150 NFVAKDGVVYVKTFVLKRGEYAISVDYRIHNTTEKPLQMTFFGQLKQNVELPKHR-DTGS 208 Query: 212 NTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 + F + G D + +SDIE +S W+ + +Y+A+ +IPS Sbjct: 209 SNFALHTYRGAAYSSDDNKYKKHSFSDIESEPLS-VTTKGGWVAMLQQYFATAWIPSANE 267 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + S F S + + I++ T ++ L+ G P I E P Sbjct: 268 T--STFYTASLDKKMAAIGYKSAPISVAANSEKTVSSTLWIG----PEIQD-EMAAVAPH 320 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 ++ +D+GW +FI++P+F L+ + + +GN+G +I++ T V+ + +PL K QY S A M Sbjct: 321 LDLSVDYGWLWFISQPLFKLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKM 380 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ +RE+ Q + + M+ LYK +NPL GC P+L+Q+P+F A+Y ++ Sbjct: 381 RLLQPKLAAMRERIGDDR-QRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMG 439 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+E+RHAPF GWI DL+A D P+Y I P++M ++MF+ KMSP Sbjct: 440 SVELRHAPFAGWINDLSAQD-----------PYY--------ILPLLMGVTMFVIQKMSP 480 Query: 510 PP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 481 TTITDPMQQKIMTYMPVMFTIFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 530 >gi|221201819|ref|ZP_03574856.1| inner membrane protein OxaA [Burkholderia multivorans CGD2M] gi|221207675|ref|ZP_03580683.1| inner membrane protein OxaA [Burkholderia multivorans CGD2] gi|221172521|gb|EEE04960.1| inner membrane protein OxaA [Burkholderia multivorans CGD2] gi|221178239|gb|EEE10649.1| inner membrane protein OxaA [Burkholderia multivorans CGD2M] Length = 543 Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 150/497 (30%), Positives = 240/497 (48%), Gaps = 54/497 (10%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D +TL + Y A + + PN N Sbjct: 81 GEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFD-HTAGHTYLARTGLLG-----DFPNHN 133 Query: 140 TVWNLISGKILTPTT------PIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSI 191 V+ ++ PT+ +KL F++ + +T + VDT +N + Sbjct: 134 DVYTQVNAG---PTSLSGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDN-V 189 Query: 192 DQIRFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGD-KSLVEQKYSDIEKSSISNFHES 248 +P + + TA T F+ AV D K + +SD++K+ + Sbjct: 190 GTTPVTPTLYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKINFSDLDKNKADYVTSA 249 Query: 249 -NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 N W+ + Y+AS +IP + + + + Y+ I PG+S+ Sbjct: 250 DNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDP--SLYRVGVKQPVAAIAPGQSVDVQAR 307 Query: 308 LFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 LFAG +E E+ L P E++ D+GW IAKP+F L+ ++ VGN+G AI+ Sbjct: 308 LFAGPEE-------ERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGWAIV 360 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 L T+ +K +FFPL+ Y S A MK I P++ LRE+FK PQ + A+++LYKT +N Sbjct: 361 LLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKND-PQKMNAALMELYKTEKVN 419 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 420 PFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFIL----------- 468 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 P++M++SM++Q ++P P D QA ++ +MP+ F FPAGL++Y+ + Sbjct: 469 --------PVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVN 520 Query: 546 NVISIVQQAVIMKMHGA 562 NV+SI QQ I + G Sbjct: 521 NVLSIAQQYYITRKLGG 537 >gi|78357437|ref|YP_388886.1| protein translocase subunit yidC [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552065|sp|Q30YQ5|OXAA_DESDG RecName: Full=Inner membrane protein oxaA gi|78219842|gb|ABB39191.1| protein translocase subunit yidC [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 536 Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 166/577 (28%), Positives = 272/577 (47%), Gaps = 87/577 (15%) Query: 9 VAIALSVIIVYAWQNFYVY------PRIEEMNN---ERKNIQTVKQPNQVDNSYAAVLID 59 +A+ LS+ ++ W + P E N ++K + V QP Q ++ AA Sbjct: 8 IAVVLSLFVLIGWSYLSEFMGWTPAPAPVEQNATAVQQKASEPVAQPVQTASAPAAS--- 64 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + A + V++ P +G L+ Y + +P+V L++P A Sbjct: 65 --SFAPTEGREVKVDTPLYTAVFQSQGGVLKHFRLKKYTESIEEGAPLVELVTPEAAGKA 122 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKI------LTPTTPIKLVF-KNANNILFERTI 172 L N W L + + L + +LVF + + FERT+ Sbjct: 123 PMGLLL-----------NGQPTWKLAAWQFEGDDLKLDGSGKGELVFVGEMDGVRFERTL 171 Query: 173 SLD-EHYLF--KIVDTVTNNSIDQIRFSPRGRIMRHKPQTA----TNTFGVQEGFIAVLG 225 S D E YL K+ T T +R P+ T Q+GF Sbjct: 172 SFDPETYLISEKVRLTDTAGVSRDVRLGMTLSTTSLSPEGGAYNLTRMAWYQDGFHQ--- 228 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 E D+ ++ + E +W G+ Y+ +V P++ FK + +G Y Sbjct: 229 -----ETSADDLRETGV-KVDEGVNWGGVMCNYFMAVMAPAEGAL---PFKGVLEGGV-Y 278 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDWGWFYFIAK 344 ++ + ++I G S + G KE ++ A+P + +++GWF F+AK Sbjct: 279 RSVVENSSLSIASGSSAEFGIGYYIGPKE------SDRLAAMPYHLDEALNYGWFTFLAK 332 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+ + +FY+ GN+G+AI++ T+ VKLLF+PL++K Y S MK +QP + +++EK+ Sbjct: 333 PLVSGLKFFYSYAGNYGVAIIILTILVKLLFWPLSQKSYKSMEQMKKLQPMVQKIKEKYG 392 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---- 460 ++ Q+ M +LYKT+ +NP GC P+LLQIPVF +Y+ + ++E+RHAPF Sbjct: 393 DDRQRMNQEVM-ELYKTYKVNPAGGCLPMLLQIPVFLGLYQGLLNAIELRHAPFIAHLPF 451 Query: 461 ----WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 W+ DL+A D PFY I P++M +M +Q +++P PAD Q Sbjct: 452 TDIVWLADLSAKD-----------PFY--------ITPVVMGATMLLQQRLTPAPADPTQ 492 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 A I+ +MPVVF F +FPAGL++YW +NV+SI QQ Sbjct: 493 AKIMMFMPVVFTFMFLNFPAGLVVYWLVNNVLSIGQQ 529 >gi|294648708|ref|ZP_06726168.1| Oxa1 family cytochrome oxidase biogenesis protein [Acinetobacter haemolyticus ATCC 19194] gi|292825383|gb|EFF84126.1| Oxa1 family cytochrome oxidase biogenesis protein [Acinetobacter haemolyticus ATCC 19194] Length = 586 Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 142/471 (30%), Positives = 234/471 (49%), Gaps = 47/471 (9%) Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 + S ++ L P +++N D TA +E + S ++LT + LVFK Sbjct: 134 AQSGLIGLNGPDSSRNGR-PMYDVEKTAYTMEDAKKMATTDGASSQVLT----VPLVFKT 188 Query: 163 ANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH------KPQTATNTFG 215 + +T + + Y + V N S + G++ R K T G Sbjct: 189 PEGVEVIKTFTFTQGEYPITVKHQVVNRSQQNWQGQMFGQLKRDNSDDPGKSDQGIFTLG 248 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS--KETSFHS 273 G D + K+S+ + N N+W+ + Y+ S +IP K T Sbjct: 249 TFLGGAWGTPDAHYNKLKFSNFSDEKL-NLDAKNAWVAMVQHYFVSAWIPGNLKLTQADG 307 Query: 274 QFKYLSDGHARYQAK------FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 Q Y + +R A F++ I + G S+ ++G P I KDLA+ Sbjct: 308 Q-PYTAKLESRQSADKMNIIGFTSPTINVPAGTSMEVDAKFYSG----PKIQSELKDLAV 362 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 +D+GW + IAK +F+ + +F+N+VGN+G +I+L T+ VKL+ +PL+ K Y S A Sbjct: 363 -GLNQTVDYGWLWPIAKLLFLGLQFFHNIVGNWGWSIILLTILVKLILWPLSSKSYRSMA 421 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ I P++ ++E+F + Q+ M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ Sbjct: 422 KMRVIAPEMQRMKEEFGDDRMRFSQE-MMALYKREQVNPLSGCLPLLLQMPIFLALYWVL 480 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+E+RHAP+ WI+DL+A DP I P++M ++M++Q + Sbjct: 481 MESVELRHAPWLLWIQDLSAMDPWFIL-------------------PLLMGVTMYVQQML 521 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +P P D QA + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 522 NPQPTDPMQAKVFRLMPIIFTVFMLFFPAGLVLYWIVNNAITILQQSFINK 572 >gi|50123363|ref|YP_052530.1| putative inner membrane protein translocase component YidC [Pectobacterium atrosepticum SCRI1043] gi|81693013|sp|Q6CYR0|OXAA_ERWCT RecName: Full=Inner membrane protein oxaA gi|49613889|emb|CAG77341.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 544 Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 153/582 (26%), Positives = 267/582 (45%), Gaps = 79/582 (13%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + IAL + WQ + E N QT++Q N+ + Sbjct: 4 QRN---LLLIALLFVTFMLWQAW------ETDKNPPATTQTIQQAT---NAVTGDATNQG 51 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS--------- 112 A + +K L +IN +G + +L Y + S+ P L + Sbjct: 52 VPASGQGKLITVKTDVLSLTINTRGGDVEQAHLLAYPDILGSDKPFHLLETTSAFVYQAQ 111 Query: 113 --------PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 P N N + +V+T ++ EL + + I + + A+ Sbjct: 112 SGLTGKNGPDNPANG--SRPLFVTTQDSFELADGQSELR------------IPMTYTAAD 157 Query: 165 NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGVQ 217 + + +T L Y + +V N S + + G++ +H+ T +N F + Sbjct: 158 GVTYTKTFVLKRGDYALNVDYSVNNTSAQPLELTLFGQLKQSIDLPKHR-DTGSNNFALH 216 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 A +KYS + N ++ W+ + +Y+A+ +IP+ T+ + F Sbjct: 217 TYRGAAFSSSEDKYKKYSFSDMDEGLNITTNSGWVAMLQQYFATAWIPT--TAGANTFYT 274 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 G+ + F A + I G L+ G P I +A P ++ +D+G Sbjct: 275 SKLGNGQAAIGFKAAPVIIAAGSQQNLNATLWVG----PEIQDKMAAVA-PHLDLTVDYG 329 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +FI++P+F L+ + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ Sbjct: 330 WLWFISQPLFKLLKFLHGFIGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKLQ 389 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +RE+ Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAP Sbjct: 390 AMRERIGDD-KQRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAP 448 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQ 516 F WI DL+A D P+Y I PI+M ++MF KMSP D Q Sbjct: 449 FALWIHDLSAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQ 489 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 490 QKIMTYMPVIFTVFFLWFPSGLVMYYIVSNLVTILQQQLIYR 531 >gi|311109680|ref|YP_003982533.1| preprotein translocase subunit YidC [Achromobacter xylosoxidans A8] gi|310764369|gb|ADP19818.1| preprotein translocase subunit YidC [Achromobacter xylosoxidans A8] Length = 558 Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 139/480 (28%), Positives = 231/480 (48%), Gaps = 38/480 (7%) Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145 GAQ L Y + P V L + Y + V N P T + ++ Sbjct: 98 GAQLVRAELLKYPATGQPDKPTVLLDRAAGLN--YVVQTGVVGAPNGQSFPTHQTPFRIV 155 Query: 146 SGKILTPTTPIKLVFKN-ANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM 203 S + + + F+ + + +T +L Y + + N + + ++ Sbjct: 156 SSERQLTGDNLVVAFEGESGGVKVTKTFTLHRGRYDVDVRHDLANVGAAPVSPALYLQLE 215 Query: 204 R--HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWA 260 R + P ++ + GF + +SDIEK S +S N W+ + Y+A Sbjct: 216 RDGNDPADTSSFYHTFTGFAVYSEQDKFQKITFSDIEKKKASYIKQSDNGWIAVVQHYFA 275 Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 + ++P + ++ L Y A+ I PG + + L+ G ++ Sbjct: 276 TAWVPPQGKQRTNEL--LEVQKNLYAARSIEAVGEIAPGAATRVDSHLWVGPQD------ 327 Query: 321 YEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 +K +A P E+++D+GW IAKP+F LM++ ++L+GN+G I+ TV +K +F+PL Sbjct: 328 -QKAMAALAPGLELVVDYGWLTIIAKPLFKLMTWLHSLLGNWGWTIVALTVLIKAVFYPL 386 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 A Y S A MK + P++ L+EK+ Q L AM+++Y+T INPL GC P+++QIP Sbjct: 387 AAASYRSMARMKQVAPRLQALKEKYGDD-KQKLNAAMMEMYRTEKINPLGGCLPMVVQIP 445 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 VF ++Y V+ S+EMR AP+ W+ DL+ DP I P IM Sbjct: 446 VFISLYWVLLASVEMRGAPWILWVHDLSIRDPYFIL-------------------PAIMM 486 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MF+Q+K++P P D QA ++ MP+VF + FPAGL++YW +N +SI QQ I + Sbjct: 487 ATMFLQIKLNPTPPDPIQAKVMMIMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWSITR 546 >gi|226952826|ref|ZP_03823290.1| inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase [Acinetobacter sp. ATCC 27244] gi|226836447|gb|EEH68830.1| inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase [Acinetobacter sp. ATCC 27244] Length = 586 Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 142/471 (30%), Positives = 234/471 (49%), Gaps = 47/471 (9%) Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 + S ++ L P +++N D TA +E + S ++LT + LVFK Sbjct: 134 AQSGLIGLNGPDSSRNGR-PMYDVEKTAYTMEDAKKMATTDGASSQVLT----VPLVFKT 188 Query: 163 ANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH------KPQTATNTFG 215 + +T + + Y + V N S + G++ R K T G Sbjct: 189 PEGVEVIKTFTFTQGEYPITVKHQVVNRSQQNWQGQMFGQLKRDNSDDPGKSDQGIFTLG 248 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS--KETSFHS 273 G D + K+S+ + N N+W+ + Y+ S +IP K T Sbjct: 249 TFLGGAWGTPDAHYNKLKFSNFSDEKL-NLDAKNAWVAMVQHYFVSAWIPGNLKLTQADG 307 Query: 274 QFKYLSDGHARYQAK------FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 Q Y + +R A F++ I + G S+ ++G P I KDLA+ Sbjct: 308 Q-PYTAKLESRQSADKMNIIGFTSPTINVPAGTSMEVDAKFYSG----PKIQSELKDLAV 362 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 +D+GW + IAK +F+ + +F+N+VGN+G +I+L T+ VKL+ +PL+ K Y S A Sbjct: 363 -GLNQTVDYGWLWPIAKLLFLGLQFFHNIVGNWGWSIILLTILVKLILWPLSSKSYRSMA 421 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ I P++ ++E+F + Q+ M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ Sbjct: 422 KMRVIAPEMQRMKEEFGDDRMRFSQE-MMALYKREQVNPLSGCLPLLLQMPIFLALYWVL 480 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+E+RHAP+ WI+DL+A DP I P++M ++M++Q + Sbjct: 481 MESVELRHAPWLLWIQDLSAMDPWFIL-------------------PLLMGVTMYVQQML 521 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +P P D QA + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 522 NPQPTDPMQAKVFRLMPIIFTVFMLFFPAGLVLYWIVNNAITILQQSFINK 572 >gi|320321684|gb|EFW77783.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. glycinea str. B076] Length = 563 Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 116/323 (35%), Positives = 184/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K I + W+ Y+ + +IP + Q + D Y F++ ++ Sbjct: 258 DIDKGQIKETVQGG-WVAWLQHYFVTAWIPDHNATNAVQTR--KDSQGNYIIGFTSPTLS 314 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG T+ L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 315 VAPGAQGETSATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 369 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 370 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLKEQHGDDR-QKMSQAM 428 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 429 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKDP----- 483 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 F+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 484 ------FF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 529 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQA I + Sbjct: 530 AGLVLYWVLNNTLSIAQQAYITR 552 >gi|320331114|gb|EFW87085.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. glycinea str. race 4] gi|330881912|gb|EGH16061.1| membrane protein insertase [Pseudomonas syringae pv. glycinea str. race 4] Length = 563 Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 116/323 (35%), Positives = 184/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K I + W+ Y+ + +IP + Q + D Y F++ ++ Sbjct: 258 DIDKGQIKETVQGG-WVAWLQHYFVTAWIPDHNATNAVQTR--KDSQGNYIIGFTSPTLS 314 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG T+ L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 315 VAPGAQGETSATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 369 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 370 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLKEQHGDDR-QKMSQAM 428 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 429 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKDP----- 483 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 F+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 484 ------FF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 529 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQA I + Sbjct: 530 AGLVLYWVLNNTLSIAQQAYITR 552 >gi|71736510|ref|YP_277293.1| inner membrane protein translocase component YidC [Pseudomonas syringae pv. phaseolicola 1448A] gi|123634467|sp|Q48BF2|OXAA_PSE14 RecName: Full=Inner membrane protein oxaA gi|71557063|gb|AAZ36274.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. phaseolicola 1448A] Length = 563 Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 116/323 (35%), Positives = 184/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K I + W+ Y+ + +IP + Q + D Y F++ ++ Sbjct: 258 DIDKGQIKETVQGG-WVAWLQHYFVTAWIPDHNATNAVQTR--KDSQGNYIIGFTSPTLS 314 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG T+ L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 315 VAPGAQGETSATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 369 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 370 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLKEQHGDDR-QKMSQAM 428 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 429 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKDP----- 483 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 F+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 484 ------FF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 529 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQA I + Sbjct: 530 AGLVLYWVVNNTLSIAQQAYITR 552 >gi|157373143|ref|YP_001471743.1| 60 kDa inner membrane insertion protein [Shewanella sediminis HAW-EB3] gi|189036364|sp|A8FP42|OXAA_SHESH RecName: Full=Inner membrane protein oxaA gi|157315517|gb|ABV34615.1| 60 kDa inner membrane insertion protein [Shewanella sediminis HAW-EB3] Length = 544 Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 146/499 (29%), Positives = 243/499 (48%), Gaps = 48/499 (9%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA-YFAELDYV-- 127 + + LI IN G L + L++ + P V L TK+ Y A+ + Sbjct: 71 ITVNTDQLIIKINPIGGDIVYSALVEHKLELDKDEPFVLL---EQTKDINYIAQSGLIGR 127 Query: 128 -----STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 S+ +++ + L SG+ T + L F N + + Sbjct: 128 NGIDSSSKGRAHFDSASREYTLASGQ---DTLEVPLTFVADNGATYTKMFVFHRGQFKVD 184 Query: 183 VDTVTNNSIDQ-IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 VD V +NS DQ ++ G+I +H + + ++ + A + +KYS + + Sbjct: 185 VDYVIDNSTDQQLQVQMYGQI-KHSIKQSESSMMMPTYRGAAFSTANTRYEKYS-FDDMA 242 Query: 242 ISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 N E W + Y+ S ++P + F +S G + F + PG Sbjct: 243 DKNLDEKTLGGWAAMLQHYFVSAWVPPANDQ-NIIFSSISAG-GQANIGFRGAVYDVAPG 300 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + T + + G K + + L +++D+G+ +++A P++ L+ +F +LV N Sbjct: 301 ATQTINSEFYVGPKNQEALSAISESL-----NLVVDYGFLWWLAVPIYKLLMFFQSLVTN 355 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G+AI+L T+ V+ + +PL K QY S A M+N+QPK+ E++E+F Q + +AM++LY Sbjct: 356 WGLAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLAEMKERFGDDR-QKMGQAMMELY 414 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI DL+ D Sbjct: 415 KKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQD---------- 464 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAG 537 P+Y + PI+M +SMF+ KM P P D Q ++ WMPVVF FPAG Sbjct: 465 -PYY--------VMPILMGISMFVMQKMQPMAPTMDPMQQKMMQWMPVVFTVFFLWFPAG 515 Query: 538 LIIYWSWSNVISIVQQAVI 556 L++YW N+++I QQ +I Sbjct: 516 LVLYWLVGNLVAITQQKII 534 >gi|121998020|ref|YP_001002807.1| 60 kDa inner membrane insertion protein [Halorhodospira halophila SL1] gi|166975869|sp|A1WWE3|OXAA_HALHL RecName: Full=Inner membrane protein oxaA gi|121589425|gb|ABM62005.1| protein translocase subunit yidC [Halorhodospira halophila SL1] Length = 550 Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 157/574 (27%), Positives = 269/574 (46%), Gaps = 63/574 (10%) Query: 8 FVAIA-LSVIIVYAWQNFYVYPR---IEEMNNERKNI-----QTVKQPNQVDNSYAAVLI 58 +A+A +S+++ +AW+ + P +EE +E ++P+ D V+ Sbjct: 9 LIALAGISLLLYFAWEREQMDPAEPVVEEQESEVDQEAPDAPSRAEEPDAGDPMAEGVVD 68 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A RV +K + I+ +G L+L + +S+ P L + Sbjct: 69 PDDEDA----KRVRVKTDLIEAEISTQGGDIRQLDLLKHQ--KASDDPTPYRLLRDEGEP 122 Query: 119 AYFAEL----DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 + A+ D + + + L G+ T + L+++ + + Sbjct: 123 LFVAQAGLGGDGPAPGRDARYEVDQDEFELAEGE---DTLEVPLIWEEDGVKVRKVYTFR 179 Query: 175 DEHYLFKIVDTVTNNSIDQ---IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 + YL + V NN+ D ++ +R +P A G +I SL Sbjct: 180 RDSYLVDVRHEVENNAEDDWAGFQYVQ----LRRRPDPA----GTTPWYIHSFTGGSLYT 231 Query: 232 QK-------YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 Q+ +SD+E S +S E + W + Y+ V IP + ++ + L Sbjct: 232 QEDRFSRISFSDMEDSDLSQ-DERDGWAAMLQHYFLGVMIPERGETYRYYTRALP--QET 288 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y S+ + + G+S TN LF G KE + L + + +D+G+ +A Sbjct: 289 YLLGMSSPWLQVAAGESGQKTNHLFVGPKEQDRLTAVGSALDVDDLRLTVDYGFLTILAN 348 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F + NLV N+G+AI++ T+ +K+ F+ L+ Y S A M+ +QPK+ ++RE++ Sbjct: 349 PLFWALDQIENLVKNWGVAILILTLLIKIAFYKLSAISYRSMAKMRKVQPKMQQIRERYS 408 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + +A+++LYK INPL GC PIL+QIPVF A+Y V+ S+E+RHAPF WI+D Sbjct: 409 DD-RQQMNQALMELYKKEKINPLGGCLPILVQIPVFIALYWVLVESVELRHAPFMLWIQD 467 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L++ DP I P++M SM +QMK++PPP D Q ++ +P Sbjct: 468 LSSRDPYFIL-------------------PLLMGASMLVQMKLNPPPMDPIQKRVMQVLP 508 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 VF FPAGL++YW +N++SI QQ I++ Sbjct: 509 FVFTGFFMLFPAGLVLYWLTNNILSIAQQWYILR 542 >gi|167626216|ref|YP_001676510.1| 60 kDa inner membrane insertion protein [Shewanella halifaxensis HAW-EB4] gi|189036362|sp|B0TQH1|OXAA_SHEHH RecName: Full=Inner membrane protein oxaA gi|167356238|gb|ABZ78851.1| 60 kDa inner membrane insertion protein [Shewanella halifaxensis HAW-EB4] Length = 544 Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 124/381 (32%), Positives = 208/381 (54%), Gaps = 39/381 (10%) Query: 183 VDTVTNNSID-QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 VD NN+ D ++ G+I +H + + ++ + + +KYS + + Sbjct: 186 VDYKINNTSDASLQVQMYGQI-KHSIKKSESSMMMPTYLGGAFSTDDIRYEKYS-FDDMA 243 Query: 242 ISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 N +S W+ + Y+ S ++P T + F + +G A + ++I PG Sbjct: 244 DKNLDDSTLGGWVAMLQHYFVSAWVPPA-TEKNIIFSSMKNGLANIGFRGELHDIA--PG 300 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 + + G K+ +K L++ P +++D+G+ +++A P++ L+ +F+++V Sbjct: 301 SEQVIKSEFYVGPKD-------QKALSVLSPSLNLVVDYGFLWWLAVPIYKLLMFFHSIV 353 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G AI+L T+ V+ L +PL K QY S A M+N+QPK+ EL+E+F Q + +AM++ Sbjct: 354 GNWGFAIILITLTVRGLLYPLTKAQYTSMAKMRNLQPKLAELKERFGDD-RQKMGQAMME 412 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI DL+ D Sbjct: 413 LYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQD-------- 464 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFP 535 P+Y + PI+M +SMF+ KM P P D Q ++ WMPV+F FP Sbjct: 465 ---PYY--------VLPILMGISMFVMQKMQPMAPTMDPMQVKMMQWMPVIFTVFFLWFP 513 Query: 536 AGLIIYWSWSNVISIVQQAVI 556 AGL++YW N+++I QQ +I Sbjct: 514 AGLVLYWLVGNLVAITQQKII 534 >gi|170729247|ref|YP_001763273.1| 60 kDa inner membrane insertion protein [Shewanella woodyi ATCC 51908] gi|254778163|sp|B1KQ65|OXAA_SHEWM RecName: Full=Inner membrane protein oxaA gi|169814594|gb|ACA89178.1| 60 kDa inner membrane insertion protein [Shewanella woodyi ATCC 51908] Length = 544 Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 145/498 (29%), Positives = 243/498 (48%), Gaps = 46/498 (9%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV--- 127 + + LI IN G L + L++ ++ P V LL +N N Y A+ + Sbjct: 71 ITVNTDQLIIKINPVGGDIVYSALVEHKLELENDEPFV-LLEQTNDIN-YIAQSGLIGRD 128 Query: 128 ----STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIV 183 S +++ ++L +G+ T + L + N + + V Sbjct: 129 GIDSSVKGRAHFDSASRNYSLAAGQ---DTLEVPLTYVAENGATYTKMFIFHRGKFDVDV 185 Query: 184 DTVTNNSID-QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 D V +N D Q++ G+I +H + + ++ + A + +KYS E + Sbjct: 186 DYVIDNKTDKQLQVQMYGQI-KHSIKKSESSMMMPTYRGAAFSTQDTRYEKYS-FEDMAD 243 Query: 243 SNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 N + W + Y+ S ++P + F +S G + F + PG Sbjct: 244 KNLDKKTLGGWAAMLQHYFVSAWVPPANDQ-NIIFSSISAG-GQANIGFRGAIFDVAPGA 301 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + T+ + G K+ + P +++D+G+ +++A P++ L+ +F ++VGN+ Sbjct: 302 TQEITSQFYVGPKDQAALSAIS-----PTLNLVVDYGFLWWLAVPIYKLLMFFQSIVGNW 356 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+L T+ V+ L +PL K QY S A M+N+QPK+ E++E+F Q + +AM++LYK Sbjct: 357 GAAIILITLTVRGLLYPLTKAQYTSMAKMRNLQPKLAEMKERFGDD-RQKMGQAMMELYK 415 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI DL+ D Sbjct: 416 KEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQD----------- 464 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAGL 538 P+Y + PI+M +SMF+ KM P P D Q ++ WMPVVF FPAGL Sbjct: 465 PYY--------VMPILMGVSMFVMQKMQPMAPTMDPMQVKMMQWMPVVFTVFFLWFPAGL 516 Query: 539 IIYWSWSNVISIVQQAVI 556 ++YW N+++I QQ I Sbjct: 517 VLYWLVGNLVAIAQQKYI 534 >gi|254447604|ref|ZP_05061070.1| inner membrane protein, 60 kDa [gamma proteobacterium HTCC5015] gi|198262947|gb|EDY87226.1| inner membrane protein, 60 kDa [gamma proteobacterium HTCC5015] Length = 553 Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 153/570 (26%), Positives = 276/570 (48%), Gaps = 43/570 (7%) Query: 8 FVAIALSVIIVYA-WQNFYVYPRIEEMNNERK-------NIQTVKQ-PNQVDNSYAAVLI 58 +++AL ++Y WQ+ Y + E N Q K P++ + ++ Sbjct: 9 LISLALVGAMIYGQWQDDYADQKAAVTQTESASSSVTTPNPQAAKDLPSRPVSENSSTTA 68 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A+ + + +K L +IN +G + L Y ++ + +V L S+ Sbjct: 69 DTAAETQVENQSIRVKTDVLDIAINTRGGNVVESQLLQYSTELGEET-LVKL--QSSQPQ 125 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKI---LTPTTPIKLVFKNANNILFERTISLD 175 +F+ + + P+ + V+ + T + LV++ + +R Sbjct: 126 RFFSVQSGLLGNAGVPAPDHHAVYRSEKTEYQLGAKDTVTVPLVWEQDGLRVTKRYTFYK 185 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ-EGFIAVLGDKSLVEQKY 234 YLF + + N + ++ R + +++ F V G + + + Y Sbjct: 186 GSYLFDLSFEIDNQTPQNWSGHQYRQLQRAEFDDSSSPFLVTYTGGVIYNQEDRYQKLDY 245 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA-RYQAKFSANE 293 ++E+S +S + + W + Y+ + +P KET+ H + +S RY ++ E Sbjct: 246 DELEESPLSQSFD-HGWAAMIQHYFLTALVPPKETANHYYSRGVSKAEGKRYILGMTSPE 304 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 I + G+S + T +F G K + + L ++ +D+G+ ++KP+F L+S+ Sbjct: 305 IAVPAGESASRTTQVFVGPKLQDRLEEVAEGL-----DLTVDYGFLTVLSKPLFHLLSWL 359 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + +GN+G +I++ T +KLLFFPL++ Y S A M+ + PK+ ++RE++ Q L + Sbjct: 360 HGFIGNWGWSIIVLTAIIKLLFFPLSQASYRSMAKMRQVTPKLQQIRERYSDD-RQRLSQ 418 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYKT INP+ C P+L+QIPVF A+Y + S+E+R APF WI DL+ D Sbjct: 419 EMMKLYKTEKINPVGSCLPMLIQIPVFIALYWALLESVELRQAPFILWINDLSTKD---- 474 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 PFY + P+IM L+M++Q K++P P D QA + MPVVF + Sbjct: 475 -------PFY--------VLPLIMGLTMYLQQKLNPTPPDPMQAKVFMMMPVVFTAFFAF 519 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW +N +SI+QQ I + AE Sbjct: 520 FPSGLVLYWVTNNTLSIIQQWWITRQLEAE 549 >gi|82703889|ref|YP_413455.1| 60 kDa inner membrane insertion protein [Nitrosospira multiformis ATCC 25196] gi|123543756|sp|Q2Y5A8|OXAA_NITMU RecName: Full=Inner membrane protein oxaA gi|82411954|gb|ABB76063.1| protein translocase subunit yidC [Nitrosospira multiformis ATCC 25196] Length = 569 Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 123/337 (36%), Positives = 186/337 (55%), Gaps = 37/337 (10%) Query: 231 EQKYSDIEKSSISNFHES------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 E+K+ IE S++ + S N W+ + +Y+ + ++P + K L G Sbjct: 247 EEKFRKIEFSALDKGNASYPKNADNGWIAMLQQYFLAAWLPKDKLPREYYAKRL--GENE 304 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFI 342 Y A I PG S T T L+AG +E + LA P ++++D+GW I Sbjct: 305 YTAGVIVPVGQIEPGSSATVTVPLYAGPEE-------QSKLASIAPGLDLVVDYGWLTVI 357 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 P+F L+S F++ GN+G+AI+L T+ VKL FFPL+ Y S A ++ + PK+ LRE+ Sbjct: 358 GAPLFWLLSLFHSWTGNWGVAIILLTMSVKLAFFPLSAAGYRSMAKLRLVTPKLQRLREQ 417 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q + +AM+ YKT INP+ GC PIL+QIPVF ++Y V+ S+E+R+A F WI Sbjct: 418 HGND-RQRMHQAMMDFYKTEKINPMGGCLPILVQIPVFISLYWVLLSSVELRYASFALWI 476 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 +DL+A D P+Y + P+IM +SMF+Q ++SPP D QA ++ Sbjct: 477 EDLSAPD-----------PYY--------VLPVIMGISMFLQQRLSPPATDPIQARVMQI 517 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 MP+ F FPAGL++Y +NV+SI QQ I +M Sbjct: 518 MPLAFSVFFFFFPAGLVLYSLVNNVLSIAQQWQITRM 554 >gi|226947217|ref|YP_002802290.1| putative inner membrane protein translocase component YidC [Azotobacter vinelandii DJ] gi|259515637|sp|C1DNF7|OXAA_AZOVD RecName: Full=Inner membrane protein oxaA gi|226722144|gb|ACO81315.1| inner membrane protein, translocase subunit YidC [Azotobacter vinelandii DJ] Length = 557 Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 180/332 (54%), Gaps = 31/332 (9%) Query: 231 EQKYSDIEKSSIS--NFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 E+ Y + + N E+ W+ Y+ + ++P+K+ + + D Y Sbjct: 244 EEPYRKVSMGDMDDKNLRETVQGGWVAWLQHYFVTAWVPNKDDT--NLVATRKDSQGNYI 301 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 F+ + + I G + T L+AG K+ + + P E+ +D+G+ +FIA+P+ Sbjct: 302 IGFTGSTLNIPAGATGETVTRLYAGPKD-----QNQLEALSPGLELTVDYGFLWFIAQPI 356 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + L+GN+G +I++ TV +KL FFPL+ Y S M+ + PK+ L+E+ + Sbjct: 357 FWLLELIHALLGNWGWSIIVLTVIIKLAFFPLSAASYRSMGRMRAVAPKLQALKEQHGED 416 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q L +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ GWI DL+ Sbjct: 417 R-QKLSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWLGWITDLS 475 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP I PIIM +MF Q ++P P D QA ++ MP++ Sbjct: 476 VKDPYFIL-------------------PIIMGATMFFQQTLNPTPPDPMQARVMKLMPII 516 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F F FPAGL++YW +NV+SI QQ I + Sbjct: 517 FTFFFLWFPAGLVLYWVVNNVLSIGQQWYITR 548 >gi|330987015|gb|EGH85118.1| membrane protein insertase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 563 Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 115/323 (35%), Positives = 184/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K + + W+ Y+ + +IP + Q + D Y F++ ++ Sbjct: 258 DIDKGQVKETVQGG-WVAWLQHYFVTAWIPDHNATNAVQTR--KDSQGNYIIGFTSPTLS 314 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG T+ L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 315 VAPGAQGETSATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 369 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 370 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLKEQHGDDR-QKMSQAM 428 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 429 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKDP----- 483 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 F+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 484 ------FF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 529 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQA I + Sbjct: 530 AGLVLYWVVNNTLSIAQQAYITR 552 >gi|330812749|ref|YP_004357211.1| Sec protein secretion system, subunit YidC [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380857|gb|AEA72207.1| Putative Sec protein secretion system, subunit YidC [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 560 Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 127/365 (34%), Positives = 198/365 (54%), Gaps = 31/365 (8%) Query: 196 FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEKSSISNFHESNSWLG 253 F+ R P ++T T G A L S +K S D++K + + W+ Sbjct: 214 FAQLKRDASSDPSSSTAT-GTATYLGAALWTSSEPYKKVSMKDMDKGPLKETVQGG-WVA 271 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 Y+ + +IP K S Q + D + ++ +T PG T+ L+AG K Sbjct: 272 WLQHYFVTAWIPQKGDSNVVQTR--KDSKGNFIIGYTGPTLTAAPGAKAETSAILYAGPK 329 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + K+L+ P E+ +D+G+ +FIA+P+F L+ + +++VGN+G +I+ T+ +K Sbjct: 330 SQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHSIVGNWGWSIIFLTMLIKG 384 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 LFFPL+ Y S A M+ + PK+ L+E+ Q + ++M++LYK INPL GC PI Sbjct: 385 LFFPLSAASYKSMARMRAVAPKLAALKEQHGDDR-QKMSQSMMELYKKEKINPLGGCLPI 443 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+PVF ++Y V+ S+EMR APF WI DL+ D PF+ I Sbjct: 444 LVQMPVFLSLYWVLLESVEMRQAPFMLWITDLSIKD-----------PFF--------IL 484 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 PIIM +MFIQ +++P P D QA ++ MP++F F FPAGL++YW +NV+SI QQ Sbjct: 485 PIIMGATMFIQQQLNPTPPDPMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNVLSITQQ 544 Query: 554 AVIMK 558 I + Sbjct: 545 WYITR 549 >gi|300725384|ref|YP_003714723.1| preprotein translocase [Xenorhabdus nematophila ATCC 19061] gi|297631940|emb|CBJ92665.1| preprotein translocase, cooperates with SecYEG and SecDFyajC translocon, membrane component [Xenorhabdus nematophila ATCC 19061] Length = 544 Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 143/501 (28%), Positives = 249/501 (49%), Gaps = 43/501 (8%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNAYFAELDYVST 129 + +K L IN +G ++ +L Y + S +P L +P T A Sbjct: 55 ITVKTDVLSLHINTRGGDIEEADLLAYPDTLGSQTPFKLLETTPEFTYQAQSGLTGANGP 114 Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNN 189 N E P +T N I + + + +++ +T L VD NN Sbjct: 115 DNQAERPLYHTTQNSFVLADGQDELRIPMTYTAPDGVVYVKTFVLKRGNYAVSVDYSINN 174 Query: 190 SID---QIRFSPRGR----IMRHKPQTATNTFGVQE-GFIAVLGDKSLVEQ-KYSDIEKS 240 D Q+ F + + + +H+ T ++ F + A D++ E+ K+ +IE Sbjct: 175 VTDKPLQMAFFGQLKQSVDVPKHR-DTGSSNFALHTYRGAAYSSDEAKYEKYKFDEIESK 233 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA--KFSANEITILP 298 +++ W+ + +Y+A+ ++P + + S F Y D + A + I I P Sbjct: 234 ALA-VTTKGGWVAMLQQYFATAWVPGEGKT--SNF-YTIDLKNQKMAIIGYKGENINIAP 289 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 ++ L+ G P + +A P ++ +D+GW +FI++P+F L+ + + +G Sbjct: 290 NSQQNISSTLWVG----PEVQDKMAAVA-PHLDLTVDYGWLWFISQPLFKLLKFLHEYIG 344 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G +I+ T V+ + +PL K QY S A M+ +QPKI +RE+F Q + + M+ L Sbjct: 345 NWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRLLQPKITAMRERFGDD-RQRMSQEMMAL 403 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YKT +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF GWI DL+A D Sbjct: 404 YKTEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFIGWINDLSAQD--------- 454 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 P+Y I P++M ++MF+ K+SP D Q I+ +MPV+F FP+G Sbjct: 455 --PYY--------ILPLLMGVTMFVIQKLSPTTVTDPMQQKIMTYMPVMFTVFFLWFPSG 504 Query: 538 LIIYWSWSNVISIVQQAVIMK 558 L++Y+ SN+++I+QQ VI + Sbjct: 505 LVLYYIVSNLVTIIQQQVIFR 525 >gi|114049516|ref|YP_740066.1| protein translocase subunit yidC [Shewanella sp. MR-7] gi|123030126|sp|Q0HPE6|OXAA_SHESR RecName: Full=Inner membrane protein oxaA gi|113890958|gb|ABI45009.1| protein translocase subunit yidC [Shewanella sp. MR-7] Length = 541 Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 145/498 (29%), Positives = 237/498 (47%), Gaps = 46/498 (9%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN-AYFAELDYV-- 127 + +K L IN G L + L+ + P V L TK+ Y A+ + Sbjct: 68 ITVKTDQLDVQINPVGGDIVFAALVSHKLEQGKDQPFVLL---EQTKDFTYIAQSGLIGR 124 Query: 128 -----STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 S S T + L G+ T + L + N + + + Sbjct: 125 DGIDSSAKGRAAFAASKTEFTLADGQ---DTLEVPLTYVADNGVTYTKVFVFHRGKFNVD 181 Query: 183 VD-TVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 +D + N S ++ G+I + KP ++ G D + K+ D+ KS Sbjct: 182 IDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTQDVRYEKYKFEDMSKS 241 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 ++ N W + Y+ S +IP S ++ F +S G F I PG Sbjct: 242 NL-NQPTLGGWAAMLQHYFVSAWIPPATDS-NTIFSSVSAG-GLANIGFRGAVYDIAPGA 298 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + ++ + G K+ + L +++D+G+ +++A P+ L+ ++ + VGN+ Sbjct: 299 TQEISSQFYVGPKDQKALSALSDTL-----NLVVDYGFLWWLAVPIHWLLMFYQSFVGNW 353 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + +AM++LYK Sbjct: 354 GVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGDDR-QKMGQAMMELYK 412 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ D Sbjct: 413 KEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQD----------- 461 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAGL 538 P+Y I P++M +SMF+ KM P P D Q ++ WMPV+F FP+GL Sbjct: 462 PYY--------ILPLLMGVSMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLWFPSGL 513 Query: 539 IIYWSWSNVISIVQQAVI 556 ++YW N+++I+QQ +I Sbjct: 514 VLYWLVGNIVAIIQQKII 531 >gi|257485603|ref|ZP_05639644.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011891|gb|EGH91947.1| membrane protein insertase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 563 Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 115/323 (35%), Positives = 184/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K + + W+ Y+ + +IP + Q + D Y F++ ++ Sbjct: 258 DIDKGQVKETVQGG-WVAWLQHYFVTAWIPDHNATNAVQTR--KDSQGNYIIGFTSPTLS 314 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG T+ L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 315 VAPGAQGETSATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 369 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 370 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLKEQHGDDR-QKMSQAM 428 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 429 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKDP----- 483 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 F+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 484 ------FF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 529 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQA I + Sbjct: 530 AGLVLYWVVNNTLSIAQQAYITR 552 >gi|330952338|gb|EGH52598.1| membrane protein insertase [Pseudomonas syringae Cit 7] Length = 563 Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 115/323 (35%), Positives = 184/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K + + W+ Y+ + +IP + Q + D Y F++ ++ Sbjct: 258 DIDKGQVKETVQGG-WVAWLQHYFVTAWIPDHNATNAVQTR--KDSQGNYIIGFTSPTLS 314 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG T+ L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 315 VAPGAQGETSATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 369 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 370 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLKEQHGDDR-QKMSQAM 428 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 429 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKDP----- 483 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 F+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 484 ------FF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 529 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQA I + Sbjct: 530 AGLVLYWVVNNTLSIAQQAYITR 552 >gi|66048358|ref|YP_238199.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. syringae B728a] gi|81307749|sp|Q4ZL11|OXAA_PSEU2 RecName: Full=Inner membrane protein oxaA gi|63259065|gb|AAY40161.1| 60 kDa inner membrane protein [Pseudomonas syringae pv. syringae B728a] gi|330970321|gb|EGH70387.1| membrane protein insertase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 563 Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 115/323 (35%), Positives = 184/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K + + W+ Y+ + +IP + Q + D Y F++ ++ Sbjct: 258 DIDKGQVKETVQGG-WVAWLQHYFVTAWIPDHNATNAVQTR--KDSQGNYIIGFTSPTLS 314 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG T+ L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 315 VAPGAQGETSATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 369 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 370 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLKEQHGDDR-QKMSQAM 428 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 429 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKDP----- 483 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 F+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 484 ------FF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 529 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQA I + Sbjct: 530 AGLVLYWVVNNTLSIAQQAYITR 552 >gi|289628218|ref|ZP_06461172.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649108|ref|ZP_06480451.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. aesculi str. 2250] gi|298484605|ref|ZP_07002710.1| integral membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160862|gb|EFI01878.1| integral membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330870071|gb|EGH04780.1| membrane protein insertase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 563 Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 115/323 (35%), Positives = 184/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K + + W+ Y+ + +IP + Q + D Y F++ ++ Sbjct: 258 DIDKGQVKETVQGG-WVAWLQHYFVTAWIPDHNATNAVQTR--KDSQGNYIIGFTSPTLS 314 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG T+ L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 315 VAPGAQGETSATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 369 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 370 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLKEQHGDDR-QKMSQAM 428 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 429 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKDP----- 483 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 F+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 484 ------FF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 529 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQA I + Sbjct: 530 AGLVLYWVVNNTLSIAQQAYITR 552 >gi|262377655|ref|ZP_06070875.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter lwoffii SH145] gi|262307414|gb|EEY88557.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter lwoffii SH145] Length = 587 Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 151/511 (29%), Positives = 240/511 (46%), Gaps = 68/511 (13%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV------STANNIEL 135 IN KG + L + + S+ P V L S+ K Y A+ + S+ N + Sbjct: 95 INPKGGDIVRIELLNHDKNKDSDEPFVML--ESDAKRTYVAQSGLIGLNGPDSSRNGRPM 152 Query: 136 PN-SNTVWNLISGKILTPTT-------PIKLVFKNANNILFERTISLDE-HYLFKIVDTV 186 T + L K + + LVFK A+ I +T + E Y + V Sbjct: 153 YELEKTAYTLADAKTVKSKDGENLKVLSVPLVFKTADGIEIIKTFNFTEGEYPVVVNHKV 212 Query: 187 TNNSIDQIRFSPRGRIMRH------KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 N S + G+I R K T G G D+ + K+ + + Sbjct: 213 VNRSGQTWQGQMFGQIKRDNSEDPGKSDQGIFTLGTFLGGAWGTPDEQYNKLKFDNFVEE 272 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI---- 296 +S + W+ + Y+ S ++P Q K Y AK + + T Sbjct: 273 KVST-EATGGWVAMVQHYFVSAWVPG-------QLKLTQGNGEAYSAKLESRKSTDNMNI 324 Query: 297 ---------LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +P ++ + F P I KDLA +D+GW + IAK +F Sbjct: 325 IGFTSPTFNVPAGTVAEIDATFYSG---PKIQSELKDLA-AGLNQTVDYGWLWPIAKLLF 380 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 + + +F+ LVGN+G AI+L T+ VKL+ +PL+ K Y S A M+ I P++ ++E+F + Sbjct: 381 VGLEFFHGLVGNWGWAIILLTILVKLILWPLSSKSYRSMAKMRVIAPEMQRMKEEFGEDR 440 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + Q+ M+ LYK +NPLAGC P+LLQ+P+F A+Y V+ S+E+RHAP+ WI+DL++ Sbjct: 441 MRFSQE-MMALYKREQVNPLAGCLPLLLQMPIFLALYWVLMESVELRHAPWMLWIQDLSS 499 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I P++M L+M+IQ ++P P D QA + +MP++F Sbjct: 500 MDPWFIL-------------------PLLMGLTMYIQQSLNPQPTDPMQAKVFKFMPIIF 540 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 L FPAGL++YW +N+I+I+QQ +I K Sbjct: 541 TVFLLFFPAGLVLYWIVNNLITILQQTLINK 571 >gi|188535565|ref|YP_001909362.1| putative inner membrane protein translocase component YidC [Erwinia tasmaniensis Et1/99] gi|254772784|sp|B2VCE6|OXAA_ERWT9 RecName: Full=Inner membrane protein oxaA gi|188030607|emb|CAO98502.1| Inner membrane protein OxaA [Erwinia tasmaniensis Et1/99] Length = 548 Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 148/534 (27%), Positives = 248/534 (46%), Gaps = 69/534 (12%) Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 S A ++ A + +K L +IN +G D L Y + S+ P + L Sbjct: 42 SAAGDAVNQGVPASGQGKTITVKTDVLSLNINTRGGDIDQAQLLTYPDKLGSDQPFLLLE 101 Query: 112 S-----------------PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 S P N N A Y S ++ EL N G++ P Sbjct: 102 STPGFLYQAQSGLTGRNGPDNPANG--ARPLYTSGQDHFELANGQ-------GELRIP-- 150 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ-IRFSPRGRIM------RHKP 207 L F N + + +T L VD NN+ Q + S G++ +H+ Sbjct: 151 ---LTFTAENGVTYTKTFVLKRGEYAIGVDYQINNTTQQPLEVSMFGQLKQTIDLPKHR- 206 Query: 208 QTATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP 265 T ++ F + G + + + K+ I + + +N W+ + +Y+A+ ++P Sbjct: 207 DTGSSNFALHTFRGAAYSSSETNYEKYKFDTIRDNENLSTTTNNGWVAMLQQYFATAWVP 266 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 S L +G A + + + + G L+ G P I + Sbjct: 267 QTAGSNTLYTSNLGNGVAAI--GYKSAPVIVAAGSQQQLAATLWVG----PEIQDKMAAV 320 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 A P ++ +D+GW +FI++P+F L+ + + +GN+G +I++ T V+ + +PL K QY S Sbjct: 321 A-PHLDLTVDYGWLWFISQPLFKLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTS 379 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A M+ +QPKI +RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y Sbjct: 380 MAKMRMLQPKIQAMRERLGDD-KQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYY 438 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 ++ S+E+RHAPF WI DLAA D P+Y I PI+M ++MF Sbjct: 439 MLMGSVELRHAPFALWIHDLAAQD-----------PYY--------ILPILMGVTMFFIQ 479 Query: 506 KMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 KMSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 480 KMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|289677544|ref|ZP_06498434.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. syringae FF5] gi|302185836|ref|ZP_07262509.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. syringae 642] gi|330898611|gb|EGH30030.1| membrane protein insertase [Pseudomonas syringae pv. japonica str. M301072PT] gi|330937304|gb|EGH41312.1| membrane protein insertase [Pseudomonas syringae pv. pisi str. 1704B] gi|330976398|gb|EGH76455.1| membrane protein insertase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 563 Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 115/323 (35%), Positives = 184/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K + + W+ Y+ + +IP + Q + D Y F++ ++ Sbjct: 258 DIDKGQVKETVQGG-WVAWLQHYFVTAWIPDHNATNAVQTR--KDSQGNYIIGFTSPTLS 314 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG T+ L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 315 VAPGAQGETSATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 369 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 370 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLKEQHGDDR-QKMSQAM 428 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 429 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKDP----- 483 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 F+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 484 ------FF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 529 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQA I + Sbjct: 530 AGLVLYWVVNNTLSIAQQAYITR 552 >gi|292490140|ref|YP_003533035.1| inner membrane protein YidC [Erwinia amylovora CFBP1430] gi|292901144|ref|YP_003540513.1| inner membrane protein [Erwinia amylovora ATCC 49946] gi|291200992|emb|CBJ48131.1| inner membrane protein [Erwinia amylovora ATCC 49946] gi|291555582|emb|CBA24181.1| Inner membrane protein yidC [Erwinia amylovora CFBP1430] gi|312174333|emb|CBX82586.1| Inner membrane protein yidC [Erwinia amylovora ATCC BAA-2158] Length = 548 Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 159/584 (27%), Positives = 264/584 (45%), Gaps = 81/584 (13%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S +I AWQ +N + +QT Q Q S A + Sbjct: 4 QRNLFLIAFLFVSFMIWQAWQT----------DNAPQPLQT--QTTQNTASAAGDAANQG 51 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS--------- 112 A + +K L +IN +G D L Y + S+ P + L S Sbjct: 52 VPASGQGKTITVKTDVLSLNINTRGGDIDQAQLLTYPDKLDSDQPFLLLESTPGFLYQAQ 111 Query: 113 --------PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 P N N Y S+ ++ EL + + I L F N Sbjct: 112 SGLTGRNGPDNPANG--TRPLYTSSQDHFELADGQSELR------------IPLTFTAEN 157 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQ-IRFSPRGRIM------RHKPQTATNTFGVQ 217 + +T L VD NN+ Q + S G++ +H+ T ++ F + Sbjct: 158 GASYTKTFVLKRGEYAIGVDYQINNTTQQPLEVSMFGQLKQTIDLPKHR-DTGSSNFALH 216 Query: 218 --EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G + + + K+ I + + +N W+ + +Y+A+ ++P S Sbjct: 217 TFRGAAYSSSETNYEKYKFDTIRDNENLSTTTNNGWVAMLQQYFATAWVPQTAGSNTLYT 276 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 L +G A + + +TI G L+ G P I +A P ++ +D Sbjct: 277 SNLGNGIAAI--GYKSAPVTIAAGSRQQLAATLWVG----PEIQDKMAAVA-PHLDLTVD 329 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +FI++P+F L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK Sbjct: 330 YGWLWFISQPLFKLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPK 389 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I +RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RH Sbjct: 390 IQAMRERLGDD-KQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRH 448 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 APF WI DLAA D P+Y I PI+M ++MF KMSP D Sbjct: 449 APFALWIHDLAAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDP 489 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 490 MQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|90581131|ref|ZP_01236930.1| putative inner membrane protein translocase component YidC [Vibrio angustum S14] gi|90437652|gb|EAS62844.1| putative inner membrane protein translocase component YidC [Vibrio angustum S14] Length = 544 Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 130/398 (32%), Positives = 204/398 (51%), Gaps = 30/398 (7%) Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I + +T L + VD N+ D+ +RHK + + + Sbjct: 160 DGINYTKTFVLKRNDYAVNVDYTVANNTDKAASVQMYAQLRHKLSDSGGSLTMPTYLGGA 219 Query: 224 LGDKSLVEQKYS-DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ-FKYLSDG 281 +KYS D K + + W+ I Y+ S +IP SQ + S+G Sbjct: 220 YSANDTKYKKYSFDDMKDKNLDVAANEGWVAIMQHYFVSAWIPRDGADQTSQVYSTTSNG 279 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + + T+ PG+S L+ G K + K+L + +D+GW +F Sbjct: 280 NGYIGVRMPIE--TVAPGQSKEIKATLWVGPKLQNEMAATAKNL-----NLTVDYGWLWF 332 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA P+ L+S+ ++LVGN+GIAI++ T V+ +PL K QY S A M+ +QPKI +RE Sbjct: 333 IANPLHKLLSFIHSLVGNWGIAIIILTFIVRGAMYPLTKAQYTSMAKMRMLQPKIQAMRE 392 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + + Q+ M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RHAPF+GW Sbjct: 393 RLGDDRQRQSQE-MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHAPFFGW 451 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL 520 I DL+A D P+Y + PI+M ++MF KMSP D Q I+ Sbjct: 452 IHDLSAQD-----------PYY--------VLPILMGITMFFIQKMSPSTVTDPMQQKIM 492 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MPV+F F FP+GL++YW SN+++++QQ +I + Sbjct: 493 TFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTIIFR 530 >gi|262166780|ref|ZP_06034517.1| OxaI/YidC membrane insertion protein [Vibrio mimicus VM223] gi|262026496|gb|EEY45164.1| OxaI/YidC membrane insertion protein [Vibrio mimicus VM223] Length = 541 Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 149/510 (29%), Positives = 247/510 (48%), Gaps = 53/510 (10%) Query: 64 ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE 123 A++ + + + + L SI+ G L Y ++ S+ P V L NT+ F Sbjct: 60 AVAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYSEELDSSEPFVLL---QNTQGHQFIA 116 Query: 124 LDYVSTANNIELPNSN--------TVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + I++ ++N ++L G+ I + ++ AN I + +T L Sbjct: 117 QSGLVGPQGIDVTSNNRPAYQVNADSFSLAEGQ---DELRIPMTYQ-ANGIDYTKTFILK 172 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y +V V NNS + + ++ + N G D + Sbjct: 173 RGSYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYS 232 Query: 234 YSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETS---FHSQFKYLSDGHARYQAKF 289 + D++ ++S ++ + +W+ + Y+AS +IP E + L D R K Sbjct: 233 FDDMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGDMGIRTPNKT 292 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 AN G L+ G P + +A P ++++D+GW +FIAKP+ L Sbjct: 293 IAN------GDKAEFEATLWVG----PKLQDQMAAVA-PNLDLVVDYGWLWFIAKPLHWL 341 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S+ + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 342 LSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQ 400 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A D Sbjct: 401 RMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQD 460 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P+Y I P++M SMF+ KMSP D Q I+ +MPV+F Sbjct: 461 -----------PYY--------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFT 501 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++YW SN+++++QQ +I K Sbjct: 502 FFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531 >gi|254509058|ref|ZP_05121161.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus 16] gi|219547991|gb|EED25013.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus 16] Length = 448 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 131/403 (32%), Positives = 210/403 (52%), Gaps = 38/403 (9%) Query: 163 ANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGF 220 AN + + +T L Y + V NNS + F + ++ + T G Sbjct: 67 ANGLEYTKTFILKRGSYAIDVEYNVVNNSGNNATFGMYAHLRQNLLDAGGSITMPTYRGG 126 Query: 221 IAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKE--TSFHSQ-FK 276 D + + D++ ++S N + W + Y+AS +IP E T+ +++ Sbjct: 127 AYSTEDTRYKKYSFEDMQDRNLSLNLPDGQGWAAMIQHYFASAWIPRNEPGTNLYTRVIG 186 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 L D R K TI G S T L+ G P + ++A P ++++D+ Sbjct: 187 NLGDIGVRMPNK------TIATGDSAQMTATLWVG----PKLQDQMAEVA-PNLDLVVDY 235 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW +FIAKP+ L+S+ + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ Sbjct: 236 GWLWFIAKPLHSLLSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKL 295 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +RE+ Q + + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+ Sbjct: 296 QAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHS 354 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKG 515 PF+GWI DL+A D P+Y I P++M SMF+ KMSP D Sbjct: 355 PFFGWIHDLSAQD-----------PYY--------ILPLLMGASMFLIQKMSPTTVTDPM 395 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 396 QQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYK 438 >gi|89074709|ref|ZP_01161167.1| putative inner membrane protein translocase component YidC [Photobacterium sp. SKA34] gi|89049473|gb|EAR55034.1| putative inner membrane protein translocase component YidC [Photobacterium sp. SKA34] Length = 544 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 149/506 (29%), Positives = 236/506 (46%), Gaps = 59/506 (11%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV--------------TLLSPSNT 116 + +K L +++ G D L Y+ + S P V L+ P+ Sbjct: 66 ITIKTDVLELTVDTLGGDVVDAKLLKYNNTLDSKDPFVLLNDTDGHDYIAQSGLIGPNGA 125 Query: 117 KNAYFAELDYVSTANNIEL-PNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + Y TA + + P N ++ P T K + I + +T L Sbjct: 126 DSQQGGRAQYSVTAKDFVMGPEQN--------ELRVPMTFTK------DGINYTKTFVLK 171 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + VD N+ D+ +RHK + + + +KYS Sbjct: 172 RNDYAVNVDYTVANNTDKAASVQMYAQLRHKLSDSGGSLTMPTYLGGAYSANDTKYKKYS 231 Query: 236 -DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ-FKYLSDGHARYQAKFSANE 293 D K + + W+ I Y+ S +IP SQ + S+G+ + Sbjct: 232 FDDMKDKNLDVAANEGWVAIMQHYFVSAWIPRDGADQTSQVYSTTSNGNGFIGVRMPIE- 290 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 T+ PG+S L+ G K + K+L + +D+GW +FIA P+ L+S+ Sbjct: 291 -TVAPGQSKAIKATLWVGPKLQNEMAATAKNL-----NLTVDYGWLWFIANPLHKLLSFI 344 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + LVGN+GIAI++ T V+ +PL K QY S A M+ +QPKI +RE+ + Q+ Sbjct: 345 HGLVGNWGIAIIILTFIVRGAMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDRQRQSQE 404 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RHAPF+GWI DL+A D Sbjct: 405 -MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHAPFFGWIHDLSAQD---- 459 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 P+Y + PI+M ++MF KMSP D Q I+ +MPV+F F Sbjct: 460 -------PYY--------VLPILMGITMFFIQKMSPSTVTDPMQQKIMTFMPVMFTFFFL 504 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++YW SN+++++QQ +I + Sbjct: 505 FFPSGLVLYWLVSNIVTLIQQTIIFR 530 >gi|299772121|ref|YP_003734147.1| putative inner membrane protein translocase component YidC [Acinetobacter sp. DR1] gi|298702209|gb|ADI92774.1| putative inner membrane protein translocase component YidC [Acinetobacter sp. DR1] Length = 586 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 152/510 (29%), Positives = 246/510 (48%), Gaps = 66/510 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD---------------- 125 IN KG + L + S+ P V L ++TK Y A+ Sbjct: 96 INPKGGDIVRIELLSHDKSKDSDQPFVML--ENDTKRTYVAQSGLIGLNGPDSSRGGRPL 153 Query: 126 YVSTANNIELPNSNTVWNLI--SGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKI 182 Y + L ++ V N S K+L + +VFK + +T + + Y + Sbjct: 154 YAVEKTSYTLADAKGVQNQKGQSEKVLN----VPMVFKTPEGVEIIKTFTFTQGQYPIVV 209 Query: 183 VDTVTNNSIDQIRFSPRGRIMRH------KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 V N S + G++ R K T G G D + K+++ Sbjct: 210 RHQVINRSQQSWQGQMFGQLKRDNSDDPGKSSQGIFTLGTFLGGAWGTPDSHYNKLKFAN 269 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPS--KETSFHSQFKYLSDGHARYQAK------ 288 + + N W+ I Y+ S +IP K T + Q Y++ +R A Sbjct: 270 FSEEKV-NTEAKGGWVAIVQHYFVSAWIPGNLKLTQANGQ-PYVAKLESRQSADHMNIIG 327 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F++ I + G S+ L++G P + KDLA+ +D+GW + IAK +F+ Sbjct: 328 FTSPVINVPAGTSMEVDAKLYSG----PKVQSELKDLAV-GLNQTVDYGWLWPIAKLLFL 382 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 + +F+++VGN+G +I+L TV VK++ +PL+ K Y S A M+ I P++ ++E+F + Sbjct: 383 GLQFFHSIVGNWGWSIILLTVMVKMILWPLSSKSYRSMAKMRVIAPEMQRMKEEFGEDRM 442 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + Q+ M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+RHAP+ GWI+DL+A Sbjct: 443 RFSQE-MMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELRHAPWLGWIQDLSAM 501 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P+IM +MF Q ++P PAD QA + MP++F Sbjct: 502 DPWFIL-------------------PLIMGATMFAQQMLNPQPADPMQAKVFRIMPIMFT 542 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FPAGL++YW +N I+I+QQ+ I K Sbjct: 543 VFMLFFPAGLVLYWIVNNSITILQQSFINK 572 >gi|317051002|ref|YP_004112118.1| membrane protein insertase, YidC/Oxa1 family [Desulfurispirillum indicum S5] gi|316946086|gb|ADU65562.1| membrane protein insertase, YidC/Oxa1 family [Desulfurispirillum indicum S5] Length = 519 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 132/341 (38%), Positives = 193/341 (56%), Gaps = 42/341 (12%) Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 EG + D L + KYSD+ S++ + + G+ DKY+ F+PS + +F + Sbjct: 218 EGIVHGSADAGLDKIKYSDV--SAVRDIRNIG-YGGVMDKYFLIAFLPSPQDTF----RL 270 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 D R A S G S+T +FAG K + Y+ L+ ID+G Sbjct: 271 FPDIPQRGAALVSPL------GTSVT----VFAGPKLKGILDTYDVGLS-----QAIDYG 315 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +A P+ + +FY+L GN+G+AI+L TV +K++FFPL+ K Y S + + P++ Sbjct: 316 FLSILAAPLMQAIRWFYSLTGNYGVAIILLTVCIKIIFFPLSHKSYKSMKKISVLAPELK 375 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+EKFK P Q L A ++LYKTH NPL+GC PIL+QIPVFFA+YK + ++E+RHAP Sbjct: 376 KLKEKFKNDP-QKLNTATMELYKTHKANPLSGCLPILVQIPVFFALYKTLMNAIELRHAP 434 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F WI DL+A D P+Y I P+IM +MF+Q KM+P D Q Sbjct: 435 FALWINDLSALD-----------PYY--------ITPVIMGATMFLQQKMTPTAMDPLQR 475 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ +P+VF F +FP+GLI+YW +NV+SI QQ I K Sbjct: 476 KIMLSLPIVFTFLFMTFPSGLILYWIVNNVLSIAQQYYINK 516 >gi|28896777|ref|NP_796382.1| putative inner membrane protein translocase component YidC [Vibrio parahaemolyticus RIMD 2210633] gi|153838490|ref|ZP_01991157.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ3810] gi|260361953|ref|ZP_05774958.1| inner membrane protein OxaA [Vibrio parahaemolyticus K5030] gi|260876536|ref|ZP_05888891.1| inner membrane protein OxaA [Vibrio parahaemolyticus AN-5034] gi|260897407|ref|ZP_05905903.1| inner membrane protein OxaA [Vibrio parahaemolyticus Peru-466] gi|260901105|ref|ZP_05909500.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ4037] gi|38502972|sp|Q87TR5|OXAA_VIBPA RecName: Full=Inner membrane protein oxaA gi|28804985|dbj|BAC58266.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus RIMD 2210633] gi|149748113|gb|EDM58972.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ3810] gi|308087936|gb|EFO37631.1| inner membrane protein OxaA [Vibrio parahaemolyticus Peru-466] gi|308090400|gb|EFO40095.1| inner membrane protein OxaA [Vibrio parahaemolyticus AN-5034] gi|308108175|gb|EFO45715.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ4037] gi|308114149|gb|EFO51689.1| inner membrane protein OxaA [Vibrio parahaemolyticus K5030] Length = 540 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 146/490 (29%), Positives = 236/490 (48%), Gaps = 47/490 (9%) Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 SI+ G +L Y ++ S+ P V L +T+ F + I+L +SN Sbjct: 76 SIDTVGGDVVHADLNQYSAELDSSDPFVLL---KDTQGHQFIAQSGLVGPQGIDLSSSNR 132 Query: 141 VWNLISGKILT-----PTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQI 194 +S T + + F AN I + +T L Y + V NNS + Sbjct: 133 PHYNVSADSFTLADGQDELRVPMTF-TANGIEYTKTYVLKRGSYALNVEYDVANNSGNNA 191 Query: 195 RFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWL 252 F + ++ + T G D + + D++ ++S N + W Sbjct: 192 TFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYSFEDMQDRNLSINLADGQGWA 251 Query: 253 GISDKYWASVFIPSKE--TSFHSQ-FKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 + Y+A+ +IP E T+ +++ L D R K TI G L+ Sbjct: 252 AMIQHYFAAAWIPRNEPGTNLYTRVIGNLGDIGVRMPNK------TIATGDQAKFEATLW 305 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 G K E P ++++D+GW +FIAKP+ L+++ + VGN+G+AI+ T Sbjct: 306 VGPK-----LQQEMAAVAPNLDLVVDYGWLWFIAKPLHSLLAFIQSFVGNWGVAIICLTF 360 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 V+ +PL K QY S A M+ +QPK+ +RE+ Q + + M++LYK +NPL G Sbjct: 361 IVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGG 419 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A D P+Y Sbjct: 420 CLPLVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQD-----------PYY------ 462 Query: 490 VGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I P++M SMF+ KMSP D Q I+ +MPV+F F FP+GL++YW SN++ Sbjct: 463 --ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIV 520 Query: 549 SIVQQAVIMK 558 +++QQ +I K Sbjct: 521 TLIQQTLIYK 530 >gi|114322029|ref|YP_743712.1| protein translocase subunit yidC [Alkalilimnicola ehrlichii MLHE-1] gi|122310593|sp|Q0A4L5|OXAA_ALHEH RecName: Full=Inner membrane protein oxaA gi|114228423|gb|ABI58222.1| protein translocase subunit yidC [Alkalilimnicola ehrlichii MLHE-1] Length = 562 Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 113/335 (33%), Positives = 181/335 (54%), Gaps = 33/335 (9%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA--RYQAKFSA 291 + D++ +S+S + W + Y+ +IP + + +Y + A Y S+ Sbjct: 242 FDDMDDTSLSR-DIRDGWAAMIQHYFLGAWIPPESQAL----RYYTRAQAGNEYVLGMSS 296 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 T+ PG N LF G KE + + + +D+G+ +AKP+F L+ Sbjct: 297 GRQTVQPGGEAEFVNRLFVGPKEQDRLRELHDSMTLS-----VDYGFLTVLAKPLFWLLD 351 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++VGN+G+AI+L T+ +KL F+ L+ Y S A M+ +QP++ +L+E+ Q L Sbjct: 352 NIQDIVGNWGVAIILVTLLIKLAFYKLSATSYRSMAKMRRVQPRMQQLKERHGDDK-QAL 410 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM++LYK INPL GC PIL+QIPVF A+Y V+ S+E+RHAPF WI+DL++ DP Sbjct: 411 NQAMMELYKKEKINPLGGCLPILVQIPVFIALYWVLLESVELRHAPFMLWIQDLSSRDPY 470 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 + P++M +MF+Q +++P P D Q I+ +P+VF Sbjct: 471 FVL-------------------PLLMGATMFLQQRLNPAPLDPIQQRIMMALPIVFTGFF 511 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK-MHGAEIG 565 FPAGL++YW +N +SI QQ IM+ + E G Sbjct: 512 MLFPAGLVLYWLVNNGLSIAQQWYIMRNLEAIEAG 546 >gi|163751385|ref|ZP_02158610.1| inner membrane protein, 60 kDa [Shewanella benthica KT99] gi|161328688|gb|EDP99836.1| inner membrane protein, 60 kDa [Shewanella benthica KT99] Length = 437 Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 126/379 (33%), Positives = 204/379 (53%), Gaps = 34/379 (8%) Query: 183 VDTVTNNSID-QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEK 239 VD V +N+ D Q++ G+I +H + + ++ + A + +KYS D+ Sbjct: 78 VDYVIDNTTDKQLQVQMYGQI-KHSIKESESSMMMPTYRGAAFSTADIRYEKYSFDDMAD 136 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 ++ N W + Y+ S +IP + + F LS G + F I PG Sbjct: 137 KNLDN-KTLGGWAAMLQHYFVSAWIPPADDQ-NIIFSSLSAG-GQANIGFRGAIYDIAPG 193 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + T + G K+ + L +++D+G+ ++IA P+ L+ +FY++VGN Sbjct: 194 ATQTIKAQFYVGPKDQKELSAISDSL-----NLVVDYGFLWWIAVPISKLLMFFYSIVGN 248 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L T+ V+ + FPL K QY S A M+++QPK+ E++E+F Q + +AM++LY Sbjct: 249 WGGAIILITLTVRGMLFPLTKAQYTSMAKMRSLQPKLAEMKERFGDD-RQKMGQAMMELY 307 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI DL+ D Sbjct: 308 KKEKVNPMGGCLPILLQMPIFIALYWVLMESVELRHAPFMLWIIDLSVQD---------- 357 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAG 537 P+Y + P++M +SMF+ +M P P D Q ++ WMPVVF FPAG Sbjct: 358 -PYY--------VMPVLMGISMFVMQRMQPMAPTMDPMQQKMMQWMPVVFTVFFLWFPAG 408 Query: 538 LIIYWSWSNVISIVQQAVI 556 L++YW N+++I QQ +I Sbjct: 409 LVLYWLVGNIVAITQQKII 427 >gi|331007812|ref|ZP_08330917.1| OxaI/YidC membrane insertion protein [gamma proteobacterium IMCC1989] gi|330418379|gb|EGG92940.1| OxaI/YidC membrane insertion protein [gamma proteobacterium IMCC1989] Length = 285 Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 111/306 (36%), Positives = 180/306 (58%), Gaps = 26/306 (8%) Query: 258 YWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317 Y+ S ++P+ ET+ + LS G Y FS +T+ G+ + + + G K+ Sbjct: 5 YFVSAWVPNSETNNSYSLRKLS-GKDIYLLGFSTPALTVAAGQQGSVSAGFYVGPKDIDR 63 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + + P ++ ID+G+ ++IAKP+F L+ +++VGN+G +I++ T+F+K++FF Sbjct: 64 L-----EAIAPYLDLTIDFGFLWWIAKPIFHLLIMIHDVVGNWGWSIIVLTLFIKIVFFY 118 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 + Y S A M+ + PK+ L+E+F Q + + M+++YKT +NP+ GC PIL+Q+ Sbjct: 119 PSAVSYRSMARMRKLSPKMALLKERFGDDK-QKMSQEMMKMYKTEKVNPMGGCLPILIQM 177 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 PVF ++Y V+ S+E+RHAPF WI DL+ DP +F P+IM Sbjct: 178 PVFISLYWVLMESVELRHAPFALWITDLSVKDPYFVF-------------------PLIM 218 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++M+IQ K++P P D QA I+ WMPV F F FPAGL+IYW +N +SI+QQ +I Sbjct: 219 GVTMYIQQKLNPTPPDPMQAKIMQWMPVAFTFMFLWFPAGLVIYWVTNNTLSIIQQYIIT 278 Query: 558 KMHGAE 563 + AE Sbjct: 279 RRIEAE 284 >gi|328471231|gb|EGF42133.1| membrane protein insertase [Vibrio parahaemolyticus 10329] Length = 540 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 146/490 (29%), Positives = 236/490 (48%), Gaps = 47/490 (9%) Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 SI+ G +L Y ++ S+ P V L +T+ F + I+L +SN Sbjct: 76 SIDTVGGDVVHADLNQYSAELDSSDPFVLL---KDTQGHQFIAQSGLVGPQGIDLSSSNR 132 Query: 141 VWNLISGKILT-----PTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQI 194 +S T + + F AN I + +T L Y + V NNS + Sbjct: 133 PHYNVSADSFTLADGQDELRVPMTF-TANGIEYTKTYVLKRGSYALNVEYDVANNSGNNA 191 Query: 195 RFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWL 252 F + ++ + T G D + + D++ ++S N + W Sbjct: 192 TFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYSFEDMQDRNLSINLADGQGWA 251 Query: 253 GISDKYWASVFIPSKE--TSFHSQ-FKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 + Y+A+ +IP E T+ +++ L D R K TI G L+ Sbjct: 252 AMIQHYFAAAWIPRNEPGTNLYTRVIGNLGDIGVRMPNK------TIATGDQAKFEATLW 305 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 G K E P ++++D+GW +FIAKP+ L+++ + VGN+G+AI+ T Sbjct: 306 VGPK-----LQQEMAAVAPNLDLVVDYGWLWFIAKPLHSLLAFIQSFVGNWGVAIICLTF 360 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 V+ +PL K QY S A M+ +QPK+ +RE+ Q + + M++LYK +NPL G Sbjct: 361 IVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGG 419 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A D P+Y Sbjct: 420 CLPLVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQD-----------PYY------ 462 Query: 490 VGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I P++M SMF+ KMSP D Q I+ +MPV+F F FP+GL++YW SN++ Sbjct: 463 --ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIV 520 Query: 549 SIVQQAVIMK 558 +++QQ +I K Sbjct: 521 TLIQQTLIYK 530 >gi|161526323|ref|YP_001581335.1| putative inner membrane protein translocase component YidC [Burkholderia multivorans ATCC 17616] gi|189348962|ref|YP_001944590.1| putative inner membrane protein translocase component YidC [Burkholderia multivorans ATCC 17616] gi|254772760|sp|A9ACA0|OXAA_BURM1 RecName: Full=Inner membrane protein oxaA gi|160343752|gb|ABX16838.1| 60 kDa inner membrane insertion protein [Burkholderia multivorans ATCC 17616] gi|189332984|dbj|BAG42054.1| preprotein translocase YidC subunit [Burkholderia multivorans ATCC 17616] Length = 553 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 150/497 (30%), Positives = 238/497 (47%), Gaps = 53/497 (10%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D +TL + Y A + + PN N Sbjct: 90 GEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFD-HTAGHTYLARTGLLGG----DFPNHN 143 Query: 140 TVWNLISGKILTPTT------PIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSI 191 V+ ++ PT+ +KL F++ + +T + VDT +N + Sbjct: 144 DVYTQVNAG---PTSLSGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDN-V 199 Query: 192 DQIRFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGD-KSLVEQKYSDIEKSSISNFHES 248 +P + + TA T F+ AV D K + +SD++K+ + Sbjct: 200 GTTPVTPTLYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKINFSDLDKNKADYVTSA 259 Query: 249 -NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 N W+ + Y+AS +IP + + + Y+ I PG+S Sbjct: 260 DNGWVAMVQHYFASAWIPQHGVKRDIYAEKIDP--SLYRVGVKQPVAAIAPGQSADVQAR 317 Query: 308 LFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 LFAG +E E+ L P E++ D+GW IAKP+F L+ ++ VGN+G AI+ Sbjct: 318 LFAGPEE-------ERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGWAIV 370 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 L T+ +K +FFPL+ Y S A MK I P++ LRE+FK PQ + A+++LYKT +N Sbjct: 371 LLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKND-PQKMNAALMELYKTEKVN 429 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 430 PFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFIL----------- 478 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 P++M++SM++Q ++P P D QA ++ +MP+ F FPAGL++Y+ + Sbjct: 479 --------PVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVN 530 Query: 546 NVISIVQQAVIMKMHGA 562 NV+SI QQ I + G Sbjct: 531 NVLSIAQQYYITRKLGG 547 >gi|113972267|ref|YP_736060.1| protein translocase subunit yidC [Shewanella sp. MR-4] gi|123129963|sp|Q0HD64|OXAA_SHESM RecName: Full=Inner membrane protein oxaA gi|113886951|gb|ABI41003.1| protein translocase subunit yidC [Shewanella sp. MR-4] Length = 541 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 145/498 (29%), Positives = 236/498 (47%), Gaps = 46/498 (9%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN-AYFAELDYV-- 127 + +K L IN G L + L+ + P V L TK+ Y A+ + Sbjct: 68 ITVKTDQLDVQINPVGGDIVFAALVSHKLEQGKDQPFVLL---EQTKDFTYIAQSGLIGR 124 Query: 128 -----STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 S S T + L G+ T + L + N + + + Sbjct: 125 DGIDSSAKGRAAFAASKTEFTLADGQ---DTLEVPLTYVADNGVTYTKVFVFHRGKFNVD 181 Query: 183 VD-TVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 +D + N S ++ G+I + KP ++ G D + K+ D+ KS Sbjct: 182 IDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTQDVRYEKYKFEDMSKS 241 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 ++ N W + Y+ S +IP S ++ F +S G F I PG Sbjct: 242 NL-NQPTLGGWAAMLQHYFVSAWIPPATDS-NTIFSSVSAG-GLANIGFRGAVYDIAPGA 298 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + ++ + G K+ + L +++D+G+ +++A P+ L+ ++ + VGN+ Sbjct: 299 TQEISSQFYVGPKDQKALSALSDTL-----NLVVDYGFLWWLAVPIHWLLMFYQSFVGNW 353 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + +AM++LYK Sbjct: 354 GVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGDDR-QKMGQAMMELYK 412 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ D Sbjct: 413 KEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQD----------- 461 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAGL 538 P+Y I P++M SMF+ KM P P D Q ++ WMPV+F FP+GL Sbjct: 462 PYY--------ILPLLMGASMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLWFPSGL 513 Query: 539 IIYWSWSNVISIVQQAVI 556 ++YW N+++I+QQ +I Sbjct: 514 VLYWLVGNIVAIIQQKII 531 >gi|262402088|ref|ZP_06078652.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC586] gi|262351734|gb|EEZ00866.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC586] Length = 541 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 149/510 (29%), Positives = 246/510 (48%), Gaps = 53/510 (10%) Query: 64 ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE 123 A + + + + + L SI+ G L Y ++ S+ P V L NT+ F Sbjct: 60 AAAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYSEELDSSEPFVLL---QNTQGHQFIA 116 Query: 124 LDYVSTANNIELPNSN--------TVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + I++ ++N ++L G+ I + ++ AN I + +T L Sbjct: 117 QSGLVGPQGIDVTSNNRPAYQVNADSFSLAEGQ---DELRIPMTYQ-ANGIEYTKTFILK 172 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y +V V NNS + + ++ + N G D + Sbjct: 173 RGSYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYS 232 Query: 234 YSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETS---FHSQFKYLSDGHARYQAKF 289 + D++ ++S ++ + +W+ + Y+AS +IP E + L D R K Sbjct: 233 FDDMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGDMGIRTPNKT 292 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 AN G L+ G P + +A P ++++D+GW +FIAKP+ L Sbjct: 293 IAN------GDKAEFEATLWVG----PKLQDQMAAVA-PNLDLVVDYGWLWFIAKPLHWL 341 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S+ + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 342 LSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQ 400 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A D Sbjct: 401 RMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQD 460 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P+Y I P++M SMF+ KMSP D Q I+ +MPV+F Sbjct: 461 -----------PYY--------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFT 501 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++YW SN+++++QQ +I K Sbjct: 502 FFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531 >gi|254788526|ref|YP_003075955.1| preprotein translocase subunit YidC [Teredinibacter turnerae T7901] gi|259515729|sp|C5BKL7|OXAA_TERTT RecName: Full=Inner membrane protein oxaA gi|237685608|gb|ACR12872.1| preprotein translocase subunit YidC [Teredinibacter turnerae T7901] Length = 560 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 125/412 (30%), Positives = 211/412 (51%), Gaps = 35/412 (8%) Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTA 210 T + L ++ + I+ +R + YL + + N + G+I R H P A Sbjct: 172 TLVVDLKYQQESAIITKRFTFHRDSYLIDLEYLIENTGDTNWVGNLYGQIKRDDHNPAQA 231 Query: 211 TNTFGVQE--GFIAVLGDKSLVEQKYSDI--EKSSISNFHESNSWLGISDKYWASVFIPS 266 G+Q G + + + K+ ++ EK +SN + W+ + Y+ S ++P Sbjct: 232 VGV-GMQPFLGAAITTPETNYKKLKFDELAKEKLEVSN---TGGWVAMVQHYFMSAWVPD 287 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 ++ + + + + + + T+ PG + + +AG K + Sbjct: 288 QDKDQKYVLRKSRNANMYFLSFTTLTSTTVAPGTTGSIKAQYYAGPKHIRVLEKIA---- 343 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ ID+ W +FIAKP+F + + + LVGN+G+AI+L T +KL+FF + Y S Sbjct: 344 -PHLDLTIDYSWLWFIAKPLFYALDFIHGLVGNWGLAIILLTCCIKLVFFYPSAMSYRSM 402 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QP ++EL+E++ Q + +++LYK +NPL GC PILLQ+PVF A+Y + Sbjct: 403 AKMRKVQPLMNELKERYGDD-RQRMSAELMKLYKKEKVNPLGGCLPILLQMPVFIALYWM 461 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 I S+E+RHAPF+ WI DL+ DP + P+IM ++M+IQ K Sbjct: 462 IMESVELRHAPFFLWIHDLSVRDPYFVL-------------------PLIMGVTMWIQQK 502 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++P PAD QA ++ MP F FPAGL++YW +N +SI QQ +I + Sbjct: 503 LNPTPADPMQAKVMQLMPFFFTALFMMFPAGLVLYWVVNNTLSITQQYIITR 554 >gi|209693637|ref|YP_002261565.1| putative inner membrane protein translocase component YidC [Aliivibrio salmonicida LFI1238] gi|254772743|sp|B6EP40|OXAA_ALISL RecName: Full=Inner membrane protein oxaA gi|208007588|emb|CAQ77688.1| inner membrane protein [Aliivibrio salmonicida LFI1238] Length = 541 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 119/337 (35%), Positives = 184/337 (54%), Gaps = 44/337 (13%) Query: 232 QKYS--DIEKSSIS-NFHESNSWLGISDKYWASVFIPSK------ETSFHSQFKYLSDGH 282 +KYS D+E ++S + W G+ Y+AS +IP T + Y+ Sbjct: 229 KKYSFDDMEDKNLSIDMTNGQGWAGMLQHYFASAWIPRNVNDATLTTRVAGDYGYIG--- 285 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 +TI G+ T T L+ G K P + K L ++ +D+GW +FI Sbjct: 286 ------VRMPSVTIPAGQEDTLTATLWTGPKLQPQMAATAKYL-----DLSVDYGWLWFI 334 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A P+ L+S+ ++VGN+G+AIM+ T V+ +PL K QY S A M+ +QPK+ +RE+ Sbjct: 335 ASPLHKLLSFIQSIVGNWGLAIMILTFIVRGAMYPLTKAQYTSMAKMRMLQPKLAAMRER 394 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q + + M++LYK +NPL GC PI+LQ+P+F ++Y + S+E+RHAPF+GWI Sbjct: 395 IGDDR-QRMSQEMMELYKKEKVNPLGGCLPIVLQMPIFISLYWALMESVELRHAPFFGWI 453 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521 DL+A D P+Y I P++M SMF+ KMSP D Q I+ Sbjct: 454 TDLSAQD-----------PYY--------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMT 494 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++PV+F FPAGL++YW SNV++++QQ +I + Sbjct: 495 FIPVMFTVFFLWFPAGLVLYWLVSNVVTLIQQTLIYR 531 >gi|160877622|ref|YP_001556938.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS195] gi|189036361|sp|A9KX20|OXAA_SHEB9 RecName: Full=Inner membrane protein oxaA gi|160863144|gb|ABX51678.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS195] gi|315269821|gb|ADT96674.1| membrane protein insertase, YidC/Oxa1 family domain containing [Shewanella baltica OS678] Length = 541 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 146/507 (28%), Positives = 239/507 (47%), Gaps = 46/507 (9%) Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN-AY 120 A + S + +K L IN G L + ++ + P V L TK+ Y Sbjct: 59 AAVTATSKLITVKTDQLDVQINPIGGDIVFAALVSHKMEQDKDQPFVLL---EQTKDFTY 115 Query: 121 FAELDYV-------STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + S + T + L G+ T + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFSTAATEYTLAEGQ---DTLEVPLTYVADNGVTYTKVFV 172 Query: 174 LDEHYLFKIVD-TVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVE 231 VD + N S ++ G+I + KP ++ G D + Sbjct: 173 FHRGKFNVDVDYKINNTSAAPLQVQMYGQIKQTIKPSESSMVMPTYRGGAFSTQDVRYEK 232 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 K+ D+ KS++ N W + Y+ S +IP S ++ F +S G F Sbjct: 233 YKFDDMAKSNL-NQATLGGWAAMLQHYFVSAWIPPATDS-NTIFSSVSAG-GLANIGFRG 289 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I PG + ++ + G K+ + L +++D+G+ +++A P+ L+ Sbjct: 290 AVYDIAPGATQEISSQFYVGPKDQKALSAISDTL-----NLVVDYGFLWWLAVPIHWLLM 344 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++ + VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + Sbjct: 345 FYQSFVGNWGLAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLTDLKERFGDDR-QKM 403 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM++LYK +NP+ GC PI+LQ+P+F A+Y V+ S E+RHAPF WI DL+ D Sbjct: 404 GQAMMELYKKEKVNPMGGCLPIILQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQD-- 461 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVF 529 P+Y I P++M +SMF+ KM P P D Q ++ WMPV+F Sbjct: 462 ---------PYY--------ILPLLMGVSMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTV 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 FPAGL++YW N+++I QQ +I Sbjct: 505 FFLWFPAGLVLYWLVGNIVAITQQKII 531 >gi|126176561|ref|YP_001052710.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS155] gi|153002875|ref|YP_001368556.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS185] gi|217975463|ref|YP_002360214.1| YidC translocase/secretase [Shewanella baltica OS223] gi|304412702|ref|ZP_07394305.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Shewanella baltica OS183] gi|307305833|ref|ZP_07585579.1| membrane protein insertase [Shewanella baltica BA175] gi|166977414|sp|A3DAS8|OXAA_SHEB5 RecName: Full=Inner membrane protein oxaA gi|166977415|sp|A6WUK4|OXAA_SHEB8 RecName: Full=Inner membrane protein oxaA gi|254778161|sp|B8EDW5|OXAA_SHEB2 RecName: Full=Inner membrane protein oxaA gi|125999766|gb|ABN63841.1| protein translocase subunit yidC [Shewanella baltica OS155] gi|151367493|gb|ABS10493.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS185] gi|217500598|gb|ACK48791.1| YidC translocase/secretase [Shewanella baltica OS223] gi|304348912|gb|EFM13327.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Shewanella baltica OS183] gi|306911326|gb|EFN41752.1| membrane protein insertase [Shewanella baltica BA175] Length = 541 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 146/507 (28%), Positives = 239/507 (47%), Gaps = 46/507 (9%) Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN-AY 120 A + S + +K L IN G L + ++ + P V L TK+ Y Sbjct: 59 AAVTATSKLITVKTDQLDVQINPIGGDIVFAALVSHKMEQDKDQPFVLL---EQTKDFTY 115 Query: 121 FAELDYV-------STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + S + T + L G+ T + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFSTAATEYTLAEGQ---DTLEVPLTYVADNGVTYTKVFV 172 Query: 174 LDEHYLFKIVD-TVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVE 231 VD + N S ++ G+I + KP ++ G D + Sbjct: 173 FHRGKFNVDVDYKINNTSAAPLQVQMYGQIKQTIKPSESSMVMPTYRGGAFSTQDVRYEK 232 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 K+ D+ KS++ N W + Y+ S +IP S ++ F +S G F Sbjct: 233 YKFDDMAKSNL-NQATLGGWAAMLQHYFVSAWIPPATDS-NTIFSSVSAG-GLANIGFRG 289 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I PG + ++ + G K+ + L +++D+G+ +++A P+ L+ Sbjct: 290 AVYDIAPGATQEISSQFYVGPKDQKALSAISDTL-----NLVVDYGFLWWLAVPIHWLLM 344 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++ + VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + Sbjct: 345 FYQSFVGNWGMAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLTDLKERFGDDR-QKM 403 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM++LYK +NP+ GC PI+LQ+P+F A+Y V+ S E+RHAPF WI DL+ D Sbjct: 404 GQAMMELYKKEKVNPMGGCLPIILQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQD-- 461 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVF 529 P+Y I P++M +SMF+ KM P P D Q ++ WMPV+F Sbjct: 462 ---------PYY--------ILPLLMGVSMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTV 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 FPAGL++YW N+++I QQ +I Sbjct: 505 FFLWFPAGLVLYWLVGNIVAITQQKII 531 >gi|293602692|ref|ZP_06685133.1| Oxa1 family cytochrome oxidase biogenesis protein [Achromobacter piechaudii ATCC 43553] gi|292818883|gb|EFF77923.1| Oxa1 family cytochrome oxidase biogenesis protein [Achromobacter piechaudii ATCC 43553] Length = 559 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 147/504 (29%), Positives = 241/504 (47%), Gaps = 38/504 (7%) Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A A + S V + L + + GAQ L Y + P V LL S N Y Sbjct: 75 APAAARSEEVVVTTDVLRLTFDTMGAQLVRAELLKYPATGQPDKPTV-LLDRSAGLN-YV 132 Query: 122 AELDYVSTANNIELPNSNTVWNLISG-KILTPTTPIKLVFKNANNILFERTISLDE-HYL 179 + V N P T + + S + LT + + + +T +L + Y Sbjct: 133 VQSGVVGAPNGQSFPTHQTPFRVTSSERQLTGDNLVVSFEGESGGVKVTKTFTLHKGRYD 192 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 + + N + + ++ R + P ++ + GF + +SDI Sbjct: 193 IDVRHDLANVGSAPVTPALYLQLERDGNDPADTSSFYHTFTGFAVYSEQDKFQKSTFSDI 252 Query: 238 EKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 EK + ++ N W+ + Y+A+ ++P + ++ L Y A+ I Sbjct: 253 EKKKANYIKQADNGWIAVVQHYFATAWVPPQGKPRTNEL--LEVQKNLYAARSIEAVGEI 310 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFY 354 PG + + L+ G ++ +K +A P E+++D+GW IAKP+F LM++ + Sbjct: 311 APGSASRVDSHLWVGPQD-------QKAMAALAPGLELVVDYGWLTIIAKPLFTLMTWLH 363 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +L+GN+G I+ TV +K +FFPLA Y S A MK + P++ L+EK+ Q L A Sbjct: 364 SLLGNWGWTIVALTVLIKAIFFPLAAASYRSMARMKQVAPRLQALKEKYGDD-KQKLNAA 422 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M+++Y+T INPL GC P+++QIPVF ++Y V+ S+EMR AP+ W+ DL+ DP I Sbjct: 423 MMEMYRTEKINPLGGCLPMVVQIPVFISLYWVLLASVEMRGAPWILWVHDLSIRDPYFIL 482 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 P IM +MF+Q+K++P P D QA ++ MP+VF + F Sbjct: 483 -------------------PAIMMATMFLQIKLNPTPPDPIQAKVMMIMPLVFGGMMFFF 523 Query: 535 PAGLIIYWSWSNVISIVQQAVIMK 558 PAGL++YW +N +SI QQ I + Sbjct: 524 PAGLVLYWCVNNTLSIAQQWSITR 547 >gi|291615449|ref|YP_003525606.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Sideroxydans lithotrophicus ES-1] gi|291585561|gb|ADE13219.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Sideroxydans lithotrophicus ES-1] Length = 545 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 154/513 (30%), Positives = 248/513 (48%), Gaps = 56/513 (10%) Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AQ S ++++ IN G L+L H D S +TL+ + Y Sbjct: 62 EAQKTSAGKKIDVTTDIFKVVINTTGGNIQHLDLLK-HKDAIDKSKPLTLMQQQGDR-IY 119 Query: 121 FAELDYVSTA---NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE- 176 A+ + +N E + ++L GK ++L +++ + + Sbjct: 120 IAQSGLLGKGLPTHNAEFSVTGDQFHLSEGK---DDLEVRLTALDSDEARVTKVYTFHRG 176 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ---- 232 YL + + N S + S +++R +T G G EQ Sbjct: 177 SYLIDVTYEIENKSQSALLPSAYFQLVRD----STPVAGASRFVPTFTGPAIYTEQEKFR 232 Query: 233 --KYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 ++SDIEK+ + N W+G+ Y+ S ++P + K L DG+ +F Sbjct: 233 KIQFSDIEKNKAKLPLNPDNGWIGMLQHYFVSAWLPEAKGKREFYAKKL-DGN-----EF 286 Query: 290 SANEI----TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 SA I I PG++ + L+AG + + D P + +D+GW IA P Sbjct: 287 SAGVILPVAKIEPGQTGKISAELYAGPAQ------SKLDKIAPGLGLTVDYGWLTIIATP 340 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+S+ + N+G++I+L TV +KL FFPL+ Y S A M+ + PK++++++++ Sbjct: 341 LFWLLSHIDEWIHNWGVSIILLTVLIKLAFFPLSAASYRSMAKMRLVAPKLEKIKQQYSD 400 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + L AM+ LYKT INPL GC P+++QIPVF A+Y I S+E+RHAPF+GWI DL Sbjct: 401 DR-EKLNHAMMDLYKTEKINPLGGCLPMIIQIPVFIALYWAILSSVELRHAPFFGWITDL 459 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 +AAD P+Y + P+IM LSM +Q K++P P D QA ++ MP+ Sbjct: 460 SAAD-----------PYY--------VLPLIMGLSMLVQSKLNPVPPDPMQAKLMQIMPI 500 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 VF FPAGL++Y +N++SI QQ I + Sbjct: 501 VFSVVFFFFPAGLVLYSVVNNILSIAQQWYITR 533 >gi|262172772|ref|ZP_06040450.1| OxaI/YidC membrane insertion protein [Vibrio mimicus MB-451] gi|261893848|gb|EEY39834.1| OxaI/YidC membrane insertion protein [Vibrio mimicus MB-451] Length = 541 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 149/510 (29%), Positives = 246/510 (48%), Gaps = 53/510 (10%) Query: 64 ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE 123 A + + + + + L SI+ G L Y ++ S+ P V L NT+ F Sbjct: 60 AAAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYSEELDSSEPFVLL---QNTQGHQFIA 116 Query: 124 LDYVSTANNIELPNSN--------TVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + I++ ++N ++L G+ I + ++ AN I + +T L Sbjct: 117 QSGLVGPQGIDVTSNNRPAYQVNADSFSLAEGQ---DELRIPMTYQ-ANGIDYTKTFILK 172 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y +V V NNS + + ++ + N G D + Sbjct: 173 RGSYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYS 232 Query: 234 YSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETS---FHSQFKYLSDGHARYQAKF 289 + D++ ++S ++ + +W+ + Y+AS +IP E + L D R K Sbjct: 233 FDDMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGDMGIRTPNKT 292 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 AN G L+ G P + +A P ++++D+GW +FIAKP+ L Sbjct: 293 IAN------GDKAEFEATLWVG----PKLQDQMAAVA-PNLDLVVDYGWLWFIAKPLHWL 341 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S+ + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 342 LSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQ 400 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A D Sbjct: 401 RMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQD 460 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P+Y I P++M SMF+ KMSP D Q I+ +MPV+F Sbjct: 461 -----------PYY--------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFT 501 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++YW SN+++++QQ +I K Sbjct: 502 FFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531 >gi|146284522|ref|YP_001174675.1| putative inner membrane protein translocase component YidC [Pseudomonas stutzeri A1501] gi|166977401|sp|A4VS82|OXAA_PSEU5 RecName: Full=Inner membrane protein oxaA gi|145572727|gb|ABP81833.1| inner membrane protein, 60 kDa [Pseudomonas stutzeri A1501] Length = 556 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 124/369 (33%), Positives = 192/369 (52%), Gaps = 44/369 (11%) Query: 200 GRIMRHK---PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN------- 249 G++ R K P ++T T G LG + + K K S+SN + N Sbjct: 213 GQLKRDKSGDPSSSTAT-----GTATYLG--AALWTKDEPYRKVSMSNMDDKNLRETVQG 265 Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 W+ Y+ + +IP + +Q + D Y F+ +T+ G T L+ Sbjct: 266 GWIAWLQHYFVTAWIP--QAGDTNQVQTRKDSQGNYIIGFTGPAVTVPAGAQGETGATLY 323 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 AG K + P + +D+G +FIA+P+F L+ + L+GN+G +I++ T+ Sbjct: 324 AGPKSQDKLEELS-----PGLRLTVDYGILWFIAQPIFWLLQNIHALLGNWGWSIIVLTI 378 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +KL FFPL+ Y S A M+ + PK+ L+E+F Q + +AM++LYK INPL G Sbjct: 379 VIKLAFFPLSAASYRSMARMRAVSPKMQALKEQFGDDR-QKMSQAMMELYKKEKINPLGG 437 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C PIL+Q+PVF A+Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 438 CLPILVQMPVFLALYWVLLESVEMRQAPWMFWITDLSIKDPYFIL--------------- 482 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 PIIM ++MFIQ +++P P D QA ++ +P++F F FPAGL++YW +N++S Sbjct: 483 ----PIIMGVTMFIQQQLNPTPPDPMQARVMKLLPIIFTFFFLWFPAGLVLYWVVNNILS 538 Query: 550 IVQQAVIMK 558 I QQ I + Sbjct: 539 IAQQWYITR 547 >gi|327482911|gb|AEA86221.1| putative inner membrane protein translocase component YidC [Pseudomonas stutzeri DSM 4166] Length = 556 Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 130/408 (31%), Positives = 208/408 (50%), Gaps = 45/408 (11%) Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQ 217 +A+ + + + +L+ +Y K+ + N S G++ R K P ++T T Sbjct: 174 SADGVNYIKRFTLERGNYALKVNYLIDNQSQQPWTGYLFGQLKRDKSGDPSSSTAT---- 229 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SWLGISDKYWASVFIPSKETS 270 G LG + + K K S+SN + N W+ Y+ + +IP + Sbjct: 230 -GTATYLG--AALWTKDEPYRKVSMSNMDDKNLRETVQGGWIAWLQHYFVTAWIP--QAG 284 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 +Q + D Y F+ +T+ G T L+AG K + P Sbjct: 285 DTNQVQTRKDSQGNYIIGFTGPAVTVPAGAQGETGATLYAGPKSQDKLEELS-----PGL 339 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + +D+G +FIA+P+F L+ + L+GN+G +I++ T+ +KL FFPL+ Y S A M+ Sbjct: 340 RLTVDYGILWFIAQPIFWLLQNIHALLGNWGWSIIVLTIVIKLAFFPLSAASYRSMARMR 399 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + PK+ L+E+F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S Sbjct: 400 AVSPKMQALKEQFGDDR-QKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLES 458 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMR AP+ WI DL+ DP I PIIM ++MFIQ +++P Sbjct: 459 VEMRQAPWMFWITDLSIKDPYFIL-------------------PIIMGVTMFIQQQLNPT 499 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P D QA ++ +P++F F FPAGL++YW +N++SI QQ I + Sbjct: 500 PPDPMQARVMKLLPIIFTFFFLWFPAGLVLYWVVNNILSIAQQWYITR 547 >gi|78067989|ref|YP_370758.1| putative inner membrane protein translocase component YidC [Burkholderia sp. 383] gi|123567331|sp|Q39BQ2|OXAA_BURS3 RecName: Full=Inner membrane protein oxaA gi|77968734|gb|ABB10114.1| protein translocase subunit yidC [Burkholderia sp. 383] Length = 555 Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 148/492 (30%), Positives = 238/492 (48%), Gaps = 43/492 (8%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 G I+ +G L L+ D +TL + Y A S + PN N Sbjct: 92 GEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFD-HTAGHTYLAR----SGLLGGDFPNHN 145 Query: 140 TVWNLISGKILTPT---TPIKLVFKN--ANNILFERTISLDEHYLFKIVDTVTNNSIDQI 194 V+ ++ + T +KL F++ + +T + VDT +N + Sbjct: 146 DVYTQLNPGTTSLTGDQNALKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDN-VGTA 204 Query: 195 RFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGD-KSLVEQKYSDIEKSSISNFHES-NS 250 +P + + TA T F+ AV D K + +SD++K+ + N Sbjct: 205 PVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKINFSDLDKNKADYVTSADNG 264 Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W+ + Y+AS +IP + + + Y+ I PG+S LFA Sbjct: 265 WVAMVQHYFASAWIPQQGVKRDIYAEKIDP--TLYRVGVKQPVAAIAPGQSADVQARLFA 322 Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 G +E + P E++ D+GW IAKP+F L+ ++ +GN+G +I+L T+ Sbjct: 323 GPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHSYIGNWGWSIVLLTLL 377 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 +K +FFPL+ Y S A MK I P++ LRE+FK S PQ + A+++LYKT +NP GC Sbjct: 378 IKAVFFPLSAASYKSMARMKEITPRMQALRERFK-SDPQKMNSALMELYKTEKVNPFGGC 436 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ D PF+ Sbjct: 437 LPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRD-----------PFF------- 478 Query: 491 GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 I P++M++SM++Q ++P P D QA ++ +MP+ F FPAGL++Y+ +NV+SI Sbjct: 479 -ILPVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSI 537 Query: 551 VQQAVIMKMHGA 562 QQ I + G Sbjct: 538 AQQYYITRKLGG 549 >gi|54307240|ref|YP_128260.1| putative inner membrane protein translocase component YidC [Photobacterium profundum SS9] gi|81697579|sp|Q6LW55|OXAA_PHOPR RecName: Full=Inner membrane protein oxaA gi|46911660|emb|CAG18458.1| Putative inner membrane protein, 60 kDa [Photobacterium profundum SS9] Length = 538 Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 118/330 (35%), Positives = 184/330 (55%), Gaps = 32/330 (9%) Query: 232 QKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS D++ S+ N +N W + Y+ S +IP E + + + S+G + Sbjct: 228 KKYSFDDMQDKSL-NMTTTNGWAAMLQHYFVSAWIPRSEEA-SNLYTRASNGLGYIGVRL 285 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 TI G T T L+ G K E + + +D+GW +FIA P+ L Sbjct: 286 PTT--TIAAGTEQTLTATLWVGPK-----LQKEMEATAANLNLTVDYGWLWFIASPLHKL 338 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S+ ++VGN+G+AIM+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 339 LSFIQSIVGNWGLAIMMLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERLGDD-RQ 397 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M++LYK +NPL GC PI+LQ+P+F A+Y + S+E+RH+PF+GWI DL+A D Sbjct: 398 RMSQEMMELYKKEKVNPLGGCLPIVLQMPIFIALYWSLMESVELRHSPFFGWIHDLSAQD 457 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P+Y I P++M +SMF+ KMSP D Q I+ +MPV+F Sbjct: 458 -----------PYY--------ILPLLMGVSMFMIQKMSPTTVTDPMQQKIMTFMPVMFT 498 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++YW SNV++++QQ +I + Sbjct: 499 FFFLFFPSGLVLYWLVSNVVTLLQQTLIYR 528 >gi|330505869|ref|YP_004382738.1| putative inner membrane protein translocase component YidC [Pseudomonas mendocina NK-01] gi|328920155|gb|AEB60986.1| putative inner membrane protein translocase component YidC [Pseudomonas mendocina NK-01] Length = 592 Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 111/310 (35%), Positives = 175/310 (56%), Gaps = 27/310 (8%) Query: 249 NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL 308 W+ Y+ + ++P+K+ + Q + D Y F+ + + G T L Sbjct: 299 GGWVAWLQHYFVTAWVPNKDNTNLIQTR--KDSQGNYIVGFTGPSVQVAAGGKGETGAIL 356 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 +AG P + + L+ P E+ +D+G+ +F+A+P+F L+ + ++GN+G +I++ T Sbjct: 357 YAG----PKLQEHLSTLS-PGLELTVDYGFLWFLAQPIFWLLQVIHGVLGNWGWSIIVLT 411 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KL+FFPL+ Y S A M+ + PK+ L+E+ Q + +AM++LYK INPL Sbjct: 412 IIIKLIFFPLSAASYRSMARMRAVSPKLQALKEQHGDDR-QKMSQAMMELYKKEKINPLG 470 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC PIL+Q+PVF A+Y V+ S+EMR AP+ WI DL+ DP F IL Sbjct: 471 GCLPILVQMPVFLALYWVLLESVEMRQAPWLLWITDLSIKDP------FFIL-------- 516 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 PIIM +MFIQ +++P P D QA +L MP++F F FPAGL++YW +N + Sbjct: 517 -----PIIMGATMFIQQQLNPTPPDPMQARVLKLMPIIFTFFFLWFPAGLVLYWVVNNCL 571 Query: 549 SIVQQAVIMK 558 SI QQ I + Sbjct: 572 SIAQQWYITR 581 >gi|120600874|ref|YP_965448.1| 60 kDa inner membrane insertion protein [Shewanella sp. W3-18-1] gi|146295080|ref|YP_001185504.1| 60 kDa inner membrane insertion protein [Shewanella putrefaciens CN-32] gi|166977417|sp|A4YCM2|OXAA_SHEPC RecName: Full=Inner membrane protein oxaA gi|166977419|sp|A1RQE9|OXAA_SHESW RecName: Full=Inner membrane protein oxaA gi|120560967|gb|ABM26894.1| protein translocase subunit yidC [Shewanella sp. W3-18-1] gi|145566770|gb|ABP77705.1| protein translocase subunit yidC [Shewanella putrefaciens CN-32] gi|319428593|gb|ADV56667.1| inner membrane insertase, YidC [Shewanella putrefaciens 200] Length = 541 Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 146/498 (29%), Positives = 239/498 (47%), Gaps = 46/498 (9%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN-AYFAELDYV-- 127 + +K L IN G L + ++ P V L TK+ Y A+ + Sbjct: 68 ITVKTDQLDVQINPVGGDIVFAALVSHKMEQGKEQPFVLL---EQTKDYTYIAQSGLIGR 124 Query: 128 ----STANN-IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 S+AN S T + L G+ T + L + N + + + Sbjct: 125 DGIDSSANGRAAFTTSATEFTLAEGQ---DTLEVPLTYVADNGVTYTKVFVFHRGKFNVD 181 Query: 183 VD-TVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 VD + N S ++ G+I + KP ++ G D + + D+ KS Sbjct: 182 VDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGGAFSTNDVRYEKYNFDDMAKS 241 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 ++ N W + Y+ S ++P S ++ F +S G F I PG Sbjct: 242 NL-NQATLGGWAAMLQHYFVSAWVPPATDS-NTIFSSVSAG-GLANIGFRGAVYDIAPGA 298 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 S ++ + G K+ + + L +++D+G+ +++A P+ L+ ++ + VGN+ Sbjct: 299 SQEISSQFYVGPKDQAALSAISETL-----NLVVDYGFLWWLAVPIHWLLMFYQSFVGNW 353 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + +AM++LYK Sbjct: 354 GVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLADLKERFGDDR-QKMGQAMMELYK 412 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP+ GC PI+LQ+P+F A+Y V+ S E+RHAPF WI DL+ D Sbjct: 413 KEKVNPMGGCLPIILQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQD----------- 461 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAGL 538 P+Y I P++M +SMFI KM P P D Q ++ WMPV+F FP+GL Sbjct: 462 PYY--------ILPLLMGVSMFIMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLWFPSGL 513 Query: 539 IIYWSWSNVISIVQQAVI 556 ++YW N+++I+QQ +I Sbjct: 514 VLYWLVGNIVAIIQQKII 531 >gi|254226943|ref|ZP_04920509.1| inner membrane protein, 60 kDa [Vibrio cholerae V51] gi|125620548|gb|EAZ48916.1| inner membrane protein, 60 kDa [Vibrio cholerae V51] Length = 482 Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 130/404 (32%), Positives = 203/404 (50%), Gaps = 38/404 (9%) Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 AN I + +T L Y +V V NNS + + ++ + N G Sbjct: 100 QANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRG 159 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETS---FHSQF 275 D + + D++ ++S ++ + +W+ + Y+AS +IP E + Sbjct: 160 GAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVI 219 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 L D R K AN G L+ G K + P ++++D Sbjct: 220 NNLGDMGIRTPNKTIAN------GDKAEFEATLWVGPK-----LQDQMAATAPNLDLVVD 268 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +FIAKP+ L+S N VGN+G+AI+ T V+ +PL K QY S A M+ +QPK Sbjct: 269 YGWLWFIAKPLHWLLSVIQNFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPK 328 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + +RE+ Q + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH Sbjct: 329 LQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRH 387 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 +PF+GWI DL+A D P+Y I P++M SMF+ KMSP D Sbjct: 388 SPFFGWIHDLSAQD-----------PYY--------ILPLLMGASMFVIQKMSPTTITDP 428 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 429 MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 472 >gi|153803663|ref|ZP_01958249.1| inner membrane protein, 60 kDa [Vibrio cholerae MZO-3] gi|153830819|ref|ZP_01983486.1| inner membrane protein, 60 kDa [Vibrio cholerae 623-39] gi|229515955|ref|ZP_04405412.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TMA 21] gi|254291134|ref|ZP_04961931.1| inner membrane protein, 60 kDa [Vibrio cholerae AM-19226] gi|297581961|ref|ZP_06943881.1| inner membrane protein [Vibrio cholerae RC385] gi|124120800|gb|EAY39543.1| inner membrane protein, 60 kDa [Vibrio cholerae MZO-3] gi|148873703|gb|EDL71838.1| inner membrane protein, 60 kDa [Vibrio cholerae 623-39] gi|150422979|gb|EDN14929.1| inner membrane protein, 60 kDa [Vibrio cholerae AM-19226] gi|229347055|gb|EEO12017.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TMA 21] gi|297533828|gb|EFH72669.1| inner membrane protein [Vibrio cholerae RC385] Length = 541 Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 130/404 (32%), Positives = 203/404 (50%), Gaps = 38/404 (9%) Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 AN I + +T L Y +V V NNS + + ++ + N G Sbjct: 159 QANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRG 218 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETS---FHSQF 275 D + + D++ ++S ++ + +W+ + Y+AS +IP E + Sbjct: 219 GAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVI 278 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 L D R K AN G L+ G K + P ++++D Sbjct: 279 NNLGDMGIRTPNKTIAN------GDKAEFEATLWVGPK-----LQDQMAATAPNLDLVVD 327 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +FIAKP+ L+S N VGN+G+AI+ T V+ +PL K QY S A M+ +QPK Sbjct: 328 YGWLWFIAKPLHWLLSVIQNFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPK 387 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + +RE+ Q + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH Sbjct: 388 LQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRH 446 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 +PF+GWI DL+A D P+Y I P++M SMF+ KMSP D Sbjct: 447 SPFFGWIHDLSAQD-----------PYY--------ILPLLMGASMFVIQKMSPTTITDP 487 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 488 MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531 >gi|326797441|ref|YP_004315261.1| membrane protein oxaA [Marinomonas mediterranea MMB-1] gi|326548205|gb|ADZ93425.1| Membrane protein oxaA [Marinomonas mediterranea MMB-1] Length = 553 Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 155/528 (29%), Positives = 255/528 (48%), Gaps = 50/528 (9%) Query: 46 PNQVDNSYAAVLIDD---RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 PN V N+ D A+AL+ +++K +L SI+ G +L Y + Sbjct: 55 PNSVSNTTLPASDTDVPANAKALASGQLIDVKTDTLDISIDPVGGDLVGASLLQYKKTLD 114 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTA---NNIELPN---SNTVWNLISGKILTPTTPI 156 ++ P V L +NT Y ++ + N+ P T + L G+ T + Sbjct: 115 ASDPFVIL--ENNTTRTYVSQSGLIGQDGIDNSKGRPTYHADKTQYVLADGE---NTLDV 169 Query: 157 KLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR---HKPQTATN 212 L F + + + +T Y + TV N S D R +I R P TAT Sbjct: 170 NLYFTDEKGVEYTKTYRFTRGVYSVEQSITVNNTSADDWRGKQFAQIKRDSTEDPSTAT- 228 Query: 213 TFGVQEGFIAVLGDKSLVEQK--YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 + G+Q + + +K +SD+E+ + ++ W+ + Y+ S +IP + + Sbjct: 229 SLGLQPYLGGAISTDEVRYEKVSFSDMEEKP-AKITTNSGWIALLQHYFVSAWIPKQGET 287 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 Q + S+ + F+ E+ + G+ T + + G K + +L Sbjct: 288 VTLQTR--SNNGINF-IGFTGPEVEVPAGQKGTLSATFYVGPKLQDQLAATAANL----- 339 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + +D+G +++A+P+F L++ ++V N+G+AI+L V VK +FF L+ Y S A M+ Sbjct: 340 DKTVDYGMLWWLAEPLFWLLTAIQSVVINWGVAIILIVVCVKAVFFKLSAASYRSMAKMR 399 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ LRE++ Q + +AM+ LYK INPL GC PIL+Q+PVF ++Y V+ S Sbjct: 400 KFGPELTRLREQYGDDR-QKMSQAMMTLYKKEKINPLGGCLPILVQMPVFLSLYWVLMES 458 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+RHAPF WI DL+ D P+Y + PI+M LSM Q ++P Sbjct: 459 VELRHAPFMLWINDLSYMD-----------PYY--------VLPILMGLSMLGQQMLNPT 499 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P D QA I+ MP+ F F FP+GL++YW +N +SI+QQ VI K Sbjct: 500 PPDPMQARIMKIMPIAFTFFFLWFPSGLVLYWVVNNTLSIIQQYVITK 547 >gi|94987512|ref|YP_595445.1| preprotein translocase subunit YidC [Lawsonia intracellularis PHE/MN1-00] gi|259515698|sp|Q1MPF3|OXAA_LAWIP RecName: Full=Membrane protein oxaA gi|94731761|emb|CAJ55124.1| Preprotein translocase subunit YidC [Lawsonia intracellularis PHE/MN1-00] Length = 532 Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 163/574 (28%), Positives = 267/574 (46%), Gaps = 85/574 (14%) Query: 9 VAIALSVIIVYAWQNFYVY-----PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 +AI LS+++ W +F Y P+++ + NER + VD + + + D Q Sbjct: 8 LAIILSLVVFLGWHSFAEYMGWISPKVQHVANERHS--------SVDQTATSNIALDSVQ 59 Query: 64 ALSMSPR---VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ++ P V ++ P I I+ G L+ Y +++ + SP+V L+SP ++ Sbjct: 60 SVFSPPTGKDVYIETPLYIAKIHSSGGILSSFILKKYKVNLDNTSPLVNLVSPEASQAMP 119 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKI-LTPTTPIKLVFKNANNILFERTISLDEHYL 179 N + SN W+ + G + L P +L F N + Sbjct: 120 LG------ITLNGQPSWSNGNWSFLGGDLYLKPGETKELTFVGIVNGV------------ 161 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV---QEGFIAVLGDKSLVEQKYSD 236 KI+ T N+ D + ++ K + G+ F D + + D Sbjct: 162 -KIIRIFTFNA-DSYLIHEKLQLASEKQNSCPTKVGLLVAATPFGTGQYDPTRMAWSIKD 219 Query: 237 I--EKSSISNFHESN-------SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 E++SI E +W G+ Y+ +V S + + +D A Sbjct: 220 SFKEETSIDTLKEKGIQESGEFNWGGVMSNYFMNVVALSDPLYLTIKGRIQND--VWRVA 277 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +N + G + T N+ F G K+ + A + E ID+G F IAKP+ Sbjct: 278 LERSNVLIPAEGTTSITVNWWF-GPKDRELLSR-----APDKLENAIDFGMFSIIAKPLL 331 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +++FY GN+G+AI++ T+ +K++F+PL++K Y S MK +QP + +LREK+ Sbjct: 332 TALTFFYEYTGNWGVAIIVLTLCIKIVFWPLSQKSYNSMEQMKKLQPMMQKLREKYAND- 390 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF--------W 459 L + ++QLYKT+ +NP GC PILLQIPVF +Y+ + S+E+RHA F Sbjct: 391 RDTLNREIMQLYKTYKVNPAGGCLPILLQIPVFIGLYQALLNSIELRHATFIYYLPFTHL 450 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 W+ DL+AAD PFY I P++M SMF+Q K++P D Q I Sbjct: 451 VWLADLSAAD-----------PFY--------ITPLLMGASMFLQQKLTPASGDPTQQKI 491 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + MP++F +FPAGL+IYW ++N++SI QQ Sbjct: 492 MMVMPIIFTVMFLNFPAGLVIYWLFNNLLSIGQQ 525 >gi|304398072|ref|ZP_07379947.1| membrane protein insertase [Pantoea sp. aB] gi|304354358|gb|EFM18730.1| membrane protein insertase [Pantoea sp. aB] Length = 548 Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 145/525 (27%), Positives = 244/525 (46%), Gaps = 49/525 (9%) Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 NS A A + +K L +IN +G + L + + S+ P L Sbjct: 41 NSVAGDAASQGVPASGQGQTITVKTDVLSLNINTRGGDVEQAQLLTFPDKLGSDQPFQLL 100 Query: 111 LSPSNTKNAYFAELDYVSTA-------NNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 T A+ + T NN P N N + + + Sbjct: 101 ----ETTPAFLYQAQSGLTGRNGPDNPNNGARPLFNAAQNHFEMADGQSELRVPMTYTAE 156 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQ-IRFSPRGRIM------RHKPQTATNTFGV 216 N +++ +T VD NN+ Q + S G++ +H+ T +N F + Sbjct: 157 NGVVYTKTFIFKRGEYAVNVDYHVNNTTQQPLEVSLFGQLKQTIDLPKHR-DTGSNNFAL 215 Query: 217 Q--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 G + + K+ I + N SN W+ + +Y+A+ ++P E + Sbjct: 216 HTFRGAAYSTSESKYEKYKFDTIADNENLNATTSNGWVAMLQQYFATAWVPRTEGTNTLY 275 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 L +G A + + +TI G L+ G P I +A P ++ + Sbjct: 276 TSNLGNGVAAI--GYKSAPVTIAAGAQQNLGATLWVG----PEIQDKMAAIA-PHLDLTV 328 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GW +FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QP Sbjct: 329 DYGWLWFISQPLFKLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQP 388 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 KI +RE+ + Q+ M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+R Sbjct: 389 KIQAMRERLGDDKQKQSQE-MMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELR 447 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-AD 513 HAPF WI DL+A D P+Y I PI+M ++MF KMSP D Sbjct: 448 HAPFVLWIHDLSAQD-----------PYY--------ILPILMGITMFFIQKMSPTTVTD 488 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 489 PMQQKIMTYMPVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|262281558|ref|ZP_06059337.1| preprotein translocase subunit YidC [Acinetobacter calcoaceticus RUH2202] gi|262257017|gb|EEY75756.1| preprotein translocase subunit YidC [Acinetobacter calcoaceticus RUH2202] Length = 586 Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 117/334 (35%), Positives = 192/334 (57%), Gaps = 35/334 (10%) Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPS--KETSFHSQFKYLSDGHARYQAK-- 288 K+++ + +S W+ I Y+ S +IP K T + Q Y++ +R A Sbjct: 266 KFANFSEEKVST-EAKGGWVAIVQHYFVSAWIPGNLKLTQANGQ-PYVAKLESRQSADHM 323 Query: 289 ----FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 F++ I + G S+ L++G P + KDLA+ +D+GW + IAK Sbjct: 324 NIIGFTSPVINVPAGTSMEVDAKLYSG----PKVQAELKDLAV-GLNQTVDYGWLWPIAK 378 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F+ + +F+++VGN+G +I+L TV VK++ +PL+ K Y S A M+ I P++ ++E+F Sbjct: 379 LLFLGLQFFHSIVGNWGWSIILLTVMVKMILWPLSSKSYRSMAKMRVIAPEMQRMKEEFG 438 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 + + Q+ M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+RHAP+ GWI+D Sbjct: 439 EDRMRFSQE-MMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELRHAPWLGWIQD 497 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DP I P+IM ++MF+Q ++P PAD QA + MP Sbjct: 498 LSAMDPWFIL-------------------PLIMGVTMFVQQMLNPQPADPMQAKVFRIMP 538 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 539 IMFTVFMLFFPAGLVLYWIVNNSITILQQSFINK 572 >gi|330861750|emb|CBX71924.1| inner membrane protein oxaA [Yersinia enterocolitica W22703] Length = 548 Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 152/522 (29%), Positives = 255/522 (48%), Gaps = 57/522 (10%) Query: 59 DDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPS 114 D +QA+ S + +L K L +IN +G + NL Y + S+ L +P+ Sbjct: 46 DKASQAVPGSGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELLETTPA 105 Query: 115 NTKNAYFAELDYVSTANN--------IELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 A + L S +N E+P ++ V L G+ I L F + Sbjct: 106 FIYQAQ-SGLTGKSGPDNPANGERPLFEVPQTSFV--LADGQ---DELRIPLTFTGKDGS 159 Query: 167 LFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGVQEG 219 +F +T L + Y + V N S + + G++ +H+ T +N F + Sbjct: 160 VFTKTFVLKRNDYAIGVDYHVKNASAAPLELTLFGQLKQSINLPKHR-DTGSNNFALHTY 218 Query: 220 FIAVLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 A +KYS DIE S+ + W+ + +Y+A+ +IP+ + + F Sbjct: 219 RGAAYSSDETKYKKYSFSDIEDKSL-DITTKGGWVAMLQQYFATAWIPAANET--NTFYS 275 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 G+ F + I PG+ L+ G P I +A P ++ +D+G Sbjct: 276 ADLGNGLAAIGFKGAPVVIQPGEQKQLGATLWVG----PEIQDKMAAIA-PHLDLTVDYG 330 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ Sbjct: 331 WLWFISQPLFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLA 390 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAP Sbjct: 391 AMRERIGDD-KQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAP 449 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQ 516 F WI DL+A D P+Y I PI+M ++M+ KMSP D Q Sbjct: 450 FILWIHDLSAQD-----------PYY--------ILPILMGITMYFIQKMSPTTVTDPMQ 490 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ +MPV+F FPAGL++Y+ SN+++I+QQ +I + Sbjct: 491 QKIMTFMPVIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 532 >gi|323493773|ref|ZP_08098891.1| membrane protein insertase [Vibrio brasiliensis LMG 20546] gi|323311907|gb|EGA65053.1| membrane protein insertase [Vibrio brasiliensis LMG 20546] Length = 539 Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 121/334 (36%), Positives = 190/334 (56%), Gaps = 38/334 (11%) Query: 232 QKYS--DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKE--TSFHSQ-FKYLSDGHARY 285 +KYS D++ ++S N + W + Y+AS +IP E T+ +++ L D R Sbjct: 227 KKYSFEDMQDRNLSLNLVDGQGWAAMIQHYFASAWIPRDEPGTNLYTRVIGNLGDIGVRM 286 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 K TI G S L+ G P + ++A P ++++D+GW +FIAKP Sbjct: 287 PNK------TIADGDSANLKATLWVG----PKLQDQMAEVA-PNLDLVVDYGWLWFIAKP 335 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + L+S+ + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Sbjct: 336 LHTLLSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD 395 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL Sbjct: 396 D-RQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWITDL 454 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I P++M SMF+ KMSP D Q I+ +MP Sbjct: 455 SAQD-----------PYY--------ILPLLMGASMFMIQKMSPTTVTDPMQQKIMTFMP 495 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F F FP+GL++YW SNV++++QQ++I K Sbjct: 496 VMFTFFFLFFPSGLVLYWLVSNVVTLIQQSLIYK 529 >gi|330890254|gb|EGH22915.1| membrane protein insertase [Pseudomonas syringae pv. mori str. 301020] Length = 563 Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 114/323 (35%), Positives = 183/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 DI+K + + W+ Y+ + +IP + Q + D Y F++ ++ Sbjct: 258 DIDKGQVKETVQGG-WVAWLQHYFVTAWIPDHNATNAVQTR--KDSQGNYIIGFTSPTLS 314 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + P T+ L+AG K + K+L+ P E+ +D+G+ +FIA+P+F L+ + + Sbjct: 315 VAPAAQGETSATLYAGPKSQAVL----KELS-PGLELTVDYGFLWFIAQPIFWLLQHIHA 369 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 370 ILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLKEQHGDDR-QKMSQAM 428 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 429 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWILWITDLSIKDP----- 483 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 F+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 484 ------FF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 529 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQA I + Sbjct: 530 AGLVLYWVVNNTLSIAQQAYITR 552 >gi|262374715|ref|ZP_06067987.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter junii SH205] gi|262310371|gb|EEY91463.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter junii SH205] Length = 585 Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 150/506 (29%), Positives = 238/506 (47%), Gaps = 58/506 (11%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV-------STANNIE 134 IN KG + L + S P V L S+ K Y A+ + S + Sbjct: 95 INPKGGDIVRVELLSHDESKDSEKPFVML--ESDAKRTYVAQSGLIGLNGPDSSRSGRPT 152 Query: 135 LPNSNTVWNLISGKILTPTTPIK-------LVFKNANNILFERTISLDE-HYLFKIVDTV 186 T + L K +T K LVFK + ++ + + Y + V Sbjct: 153 YDVEKTTYTLADAKSITTQDEKKQQVLTVPLVFKTPEGVEIIKSFTFTQGDYPITVKHQV 212 Query: 187 TNNSIDQIRFSPRGRIMRH------KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 N S + G++ R K T G G ++ + K+ + Sbjct: 213 INRSQQNWQGQMFGQLKRDNSDDPGKSSQGIFTLGTYLGGAWGTPEEHYNKLKFENFNDE 272 Query: 241 SISNFHESNSWLGISDKYWASVFIPS--KETSFHSQFKYLSDGHARYQAK------FSAN 292 + N W+ I Y+ S +IP K T Q Y + +R F++ Sbjct: 273 KL-NVEAKGGWVAIVQHYFVSAWIPGNLKLTQADGQ-PYTAKLESRQSTDGMNIIGFTSP 330 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 I + G S+ L++G P I KDLA +D+GW + IAK +F+ + + Sbjct: 331 VINVPAGTSMEVDAKLYSG----PKIQSELKDLA-DGLNQTVDYGWLWPIAKLLFLGLQF 385 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F+NLVGN+G +I+L T+ VKL+ +PL+ K Y S A M+ I P++ ++E+F + + Q Sbjct: 386 FHNLVGNWGWSIILLTILVKLILWPLSSKSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQ 445 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+RHAP+ GWI+DL+A DP Sbjct: 446 E-MMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELRHAPWLGWIQDLSAMDPWF 504 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I P+IM ++M++Q ++P P D QA + MP++F + Sbjct: 505 IL-------------------PLIMGVTMYVQQMLNPQPTDPMQAKVFRIMPIMFTVFML 545 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N I+I+QQ+ I K Sbjct: 546 FFPAGLVLYWIVNNSITILQQSFINK 571 >gi|227113120|ref|ZP_03826776.1| putative inner membrane protein translocase component YidC [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227328549|ref|ZP_03832573.1| putative inner membrane protein translocase component YidC [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 544 Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 149/582 (25%), Positives = 265/582 (45%), Gaps = 79/582 (13%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + IAL + WQ + E N Q ++Q N+ + Sbjct: 4 QRN---LLLIALLFVTFMLWQAW------ETDKNPPATTQAIQQAT---NAVTGDATNQG 51 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS--------- 112 A + +K L +IN +G + +L Y + S+ P L + Sbjct: 52 VPASGQGKLITVKTDVLSLTINTRGGDIEQAHLLAYPDTLGSDKPFHLLETTSEFVYQAQ 111 Query: 113 --------PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 P N N + +T ++ EL + + I + + A+ Sbjct: 112 SGLTGKNGPDNPANG--PRPLFTTTQDSFELADGQSELR------------IPMTYTAAD 157 Query: 165 NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGVQ 217 + + +T L Y + +V N S + + G++ +H+ T ++ F + Sbjct: 158 GVTYTKTFVLKRGDYALNVDYSVNNTSAQPLELTLFGQLKQSIELPKHR-DTGSSNFALH 216 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 A +KYS + N + W+ + +Y+A+ +IP+ T+ + F Sbjct: 217 TYRGAAFSSSEDKYKKYSFSDMDENLNITTNGGWVAMLQQYFATAWIPT--TAGANTFYT 274 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 G+ + F + + + G L+ G P I +A P ++ +D+G Sbjct: 275 SKLGNGQAAIGFKSAPVVVAAGSQQDLKTTLWVG----PEIQDKMAAVA-PHLDLTVDYG 329 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +FI++P+F L+ + ++ +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ Sbjct: 330 WLWFISQPLFKLLKFLHSFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRLLQPKLQ 389 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +RE+ Q + + M+ LYK+ +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAP Sbjct: 390 AMRERIGDD-KQRMSQEMMALYKSEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAP 448 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQ 516 F WI DL+A D P+Y I PI+M ++MF KMSP D Q Sbjct: 449 FALWIHDLSAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQ 489 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 490 QKIMTYMPVIFTVFFLWFPSGLVMYYIVSNLVTILQQQLIYR 531 >gi|225025482|ref|ZP_03714674.1| hypothetical protein EIKCOROL_02382 [Eikenella corrodens ATCC 23834] gi|224941766|gb|EEG22975.1| hypothetical protein EIKCOROL_02382 [Eikenella corrodens ATCC 23834] Length = 543 Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 152/540 (28%), Positives = 260/540 (48%), Gaps = 51/540 (9%) Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGA-QFDDLNLRGY----HL 99 QP Q + AAV + +A A + P + + LK + +LRG H Sbjct: 30 QPQQPEQ--AAVQTEQQAAAPVAGSDLPPTKPITVSTDTLKAVIDENSGDLRGLDLLKHN 87 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 S TLLS N ++ Y + + N L +S+ S + T ++L Sbjct: 88 SAGDASKTFTLLS-DNNEHKYLVQSLLIDQKGNYLLQDSSFKAPQNSYTLNGDTLEVRLS 146 Query: 160 FKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 N + ++ + + YL + + N++ ++ R++R + + Q Sbjct: 147 APETNGVQVDKVYTFRKGSYLIDVRFDIANHTDAPLKLDGVYRVLRDSSTPEGSGYFNQT 206 Query: 219 --GFIAVLGDKSLVEQKYSDIE-----KSSISNFHES--NSWLGISDKYWASVFI--PSK 267 G +A D + + + D++ K +++ + + W+G + Y+ +V++ P Sbjct: 207 YVGPVAYTPDGNFQKVPFKDLDDDFESKRDRADYQRTATSGWVGFTQHYFTTVWVLQPKD 266 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILP----GKSITTTNFLFAGAKEFPTIHHYEK 323 S L D R +SA LP G+ ++ L+AG +E+ I Sbjct: 267 GNSICQNGNCLLDIKRRSDNLYSAGVRVPLPAIAAGQKLSVPAELYAGPQEYAVISKVAD 326 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 R E++ D+G + +A P+F L+++ ++L+GN+G +I+L T+ VK L PL Y Sbjct: 327 -----RLELVKDYGRTHVVAAPLFGLLNWLHSLIGNWGWSIVLLTIIVKTLLLPLTNASY 381 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S A M+ + PK++ L+++ LQ+AM+++YK INPL GC P+LLQ PVF + Sbjct: 382 RSMAKMRAVAPKLEMLKKQHGDDR-MALQQAMMKMYKDEKINPLGGCLPMLLQFPVFIGL 440 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y V+ S+E+R A WGW+ DLA DP I PI+M+L+M+I Sbjct: 441 YWVLLASVELRQAS-WGWVADLARPDPLYIL-------------------PILMALTMYI 480 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-MKMHGA 562 Q K+SPPP+D QA ++ MP+ F FPAGL++Y+ +N++S+ QQ +I K++GA Sbjct: 481 QTKLSPPPSDPMQAKMMKIMPLAFSVMFFFFPAGLVLYYVVNNLLSMGQQWLINRKINGA 540 >gi|90408841|ref|ZP_01216983.1| tRNA modification GTPase [Psychromonas sp. CNPT3] gi|90310068|gb|EAS38211.1| tRNA modification GTPase [Psychromonas sp. CNPT3] Length = 331 Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 114/329 (34%), Positives = 186/329 (56%), Gaps = 33/329 (10%) Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS--FHSQFKYLSDGHARYQAKFS 290 K+ D++ +++ W+ + Y+ + +IPS + + +S +D ++A Sbjct: 22 KFDDMQDAALKE-TTKGGWVAMLQHYFVAAWIPSVDDTNVLYSNVIRGTDAAIGFKAPVQ 80 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 T+ T + L+ G P + ++A ++ +D+GW +FIA+P+F L+ Sbjct: 81 ----TVEAHSEKTISADLWVG----PKLQDEMAEVA-SHLDLTVDYGWLWFIAQPLFKLL 131 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 +F +VGN+G+AI+L T VK +PL K QY S A M+ +QPKI ELRE++K Q Sbjct: 132 LFFQGIVGNWGVAIILITFTVKGALYPLTKAQYTSMAKMRLLQPKIKELRERYKDD-RQK 190 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + K+M++LYK +NPL GC+PILLQ+P+F A+Y + ++++RHAPF WI+DL+ DP Sbjct: 191 ISKSMMELYKKEKVNPLGGCFPILLQMPIFIALYWSLMEAVQLRHAPFVLWIQDLSVQDP 250 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVF 529 I PI+M +SMF KMSP D Q I+ +MP++F F Sbjct: 251 YYIM-------------------PILMGVSMFFIQKMSPTQVEDPMQQKIMKFMPIIFTF 291 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW SN+++++QQ +I + Sbjct: 292 FFLWFPAGLVLYWLMSNIVTLIQQTIIFR 320 >gi|238765480|ref|ZP_04626399.1| Inner membrane protein oxaA [Yersinia kristensenii ATCC 33638] gi|332163525|ref|YP_004300102.1| putative inner membrane protein translocase component YidC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|238696304|gb|EEP89102.1| Inner membrane protein oxaA [Yersinia kristensenii ATCC 33638] gi|318608031|emb|CBY29529.1| inner membrane protein translocase component YidC, long form [Yersinia enterocolitica subsp. palearctica Y11] gi|325667755|gb|ADZ44399.1| putative inner membrane protein translocase component YidC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 531 Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 152/522 (29%), Positives = 255/522 (48%), Gaps = 57/522 (10%) Query: 59 DDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPS 114 D +QA+ S + +L K L +IN +G + NL Y + S+ L +P+ Sbjct: 29 DKASQAVPGSGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELLETTPA 88 Query: 115 NTKNAYFAELDYVSTANN--------IELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 A + L S +N E+P ++ V L G+ I L F + Sbjct: 89 FIYQAQ-SGLTGKSGPDNPANGERPLFEVPQTSFV--LADGQ---DELRIPLTFTGKDGS 142 Query: 167 LFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGVQEG 219 +F +T L + Y + V N S + + G++ +H+ T +N F + Sbjct: 143 VFTKTFVLKRNDYAIGVDYHVKNASAAPLELTLFGQLKQSINLPKHR-DTGSNNFALHTY 201 Query: 220 FIAVLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 A +KYS DIE S+ + W+ + +Y+A+ +IP+ + + F Sbjct: 202 RGAAYSSDETKYKKYSFSDIEDKSL-DITTKGGWVAMLQQYFATAWIPAANET--NTFYS 258 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 G+ F + I PG+ L+ G P I +A P ++ +D+G Sbjct: 259 ADLGNGLAAIGFKGAPVVIQPGEQKQLGATLWVG----PEIQDKMAAIA-PHLDLTVDYG 313 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ Sbjct: 314 WLWFISQPLFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLA 373 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAP Sbjct: 374 AMRERIGDD-KQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAP 432 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQ 516 F WI DL+A D P+Y I PI+M ++M+ KMSP D Q Sbjct: 433 FILWIHDLSAQD-----------PYY--------ILPILMGITMYFIQKMSPTTVTDPMQ 473 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ +MPV+F FPAGL++Y+ SN+++I+QQ +I + Sbjct: 474 QKIMTFMPVIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 515 >gi|242278540|ref|YP_002990669.1| hypothetical protein Desal_1066 [Desulfovibrio salexigens DSM 2638] gi|259515640|sp|C6C0J6|OXAA_DESAD RecName: Full=Inner membrane protein oxaA gi|242121434|gb|ACS79130.1| 60 kDa inner membrane insertion protein [Desulfovibrio salexigens DSM 2638] Length = 539 Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 171/581 (29%), Positives = 275/581 (47%), Gaps = 74/581 (12%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ-VDNSYAAVLIDDRA 62 N +A+ALS ++ WQ +++P + + QT QPNQ VD+S A + + Sbjct: 3 NKRVILAVALSFAVLLGWQ--FLFPPQPQQPAPAQQEQTA-QPNQAVDSSVAGPVSNQLP 59 Query: 63 QALSMSP-------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 S S R+ ++ P IN +G + L+ + + ++SP V ++ + Sbjct: 60 DPASTSAIVSAKGTRLTVETPLYSAVINSQGGLLESFKLKKFKATIDADSPDVDMVGTNA 119 Query: 116 TKNAYFAE-LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK-NANNILFERTIS 173 A L+ ++T N NL K+ T L+F+ + ER ++ Sbjct: 120 LDKAPMGLILNGIATWANGVWGYEGANLNLEGDKLGT------LIFRGDVEGFRIERRLT 173 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF-----IAVLGDK 227 ++YL V N S +P G + R TAT + + IA + Sbjct: 174 FHADNYLIDEDVRVINKS------NPSG-MGRIAFTTATKSLTAADDRYNPTRIAWFNAE 226 Query: 228 SLVEQKYSDIEKSSISNFHESN--SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 LVE+ SD + S + ES W I Y+ +P ++ + L D R Sbjct: 227 GLVEE--SDRDTLSETGVTESGKVEWAAIDSNYFILALVPGADSV--TMKGKLQDDIFRI 282 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 A+ + + + K + F G + + +L+ ID+GWF IAKP Sbjct: 283 AAEQNVSFDKDIERKLACSYYF---GPMDAQLMAKVPGELS-----KAIDFGWFDIIAKP 334 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + + + +F+ N+GIAI+L T+ +K+LF+PL+ K Y S MK +QP + +LREK Sbjct: 335 LVVALEWFHQYTNNYGIAIILLTIVIKILFWPLSHKSYKSMEQMKRLQPMMAKLREKHGD 394 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG----- 460 + L K M+QLYKT+N+NP GC P+LLQIPVFF +YK + ++ +RHA F Sbjct: 395 D-REALNKEMMQLYKTYNVNPAGGCLPMLLQIPVFFGLYKALMGTVALRHADFVHFLPFT 453 Query: 461 ---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 W+ DL+A DP + I PI+M +MF+Q KM+P D Q Sbjct: 454 DIVWLADLSAKDP-------------------LYITPIVMGATMFLQQKMTPSAGDPTQQ 494 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ ++P+VF F +FP+GL++YW +NV+SI QQ ++M+ Sbjct: 495 KIMMFLPLVFTFMFLNFPSGLVVYWMVNNVLSIAQQWMMMR 535 >gi|50086619|ref|YP_048129.1| putative inner membrane protein translocase component YidC [Acinetobacter sp. ADP1] gi|49532593|emb|CAG70307.1| Inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase [Acinetobacter sp. ADP1] Length = 583 Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 147/504 (29%), Positives = 240/504 (47%), Gaps = 59/504 (11%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV-------STANNIE 134 IN KG + L + +S+ P V L S+ K Y A+ + S Sbjct: 98 INPKGGDIVRIELLNHDQSKNSDQPFVML--ESDAKRTYVAQSGLIGLNGPDSSRGGRPV 155 Query: 135 LPNSNTVWNLISGK-------ILTPTTPIKLVFKNANNI-LFERTISLDEHYLFKIVDTV 186 + + L K L T + +V+K + + + +R Y + V Sbjct: 156 FDVEKSAYTLTDAKETKDKDGKLVKTLTVPMVYKTTDGVEIIKRFTFKQGDYPIVVSYQV 215 Query: 187 TNNSIDQIRFSPRGRIMRH------KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 N S + G+I R K T G G G E+ Y+ ++ + Sbjct: 216 VNRSPQNWQGQMFGQIKRDNSEDPGKSDQGIFTLGTFLG-----GAWGTPEEHYNKLKFA 270 Query: 241 SIS----NFHESNSWLGISDKYWASVFIPSK--ETSFHSQFKYLSDGHARYQAKFSANEI 294 + S N W+ + Y+ S +IP + ++ ++ + F++ I Sbjct: 271 NFSDEKLNVEAKGGWVAMVQHYFVSAWIPGHFGDQAYTAKLESRKSADNMNIIGFTSPTI 330 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 + GK++T ++G P I KDLA+ +D+GW + IAK +F+ + +F+ Sbjct: 331 NVPAGKTMTVDATFYSG----PKIQSELKDLAV-GLNQTVDYGWLWPIAKLLFIGLQFFH 385 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 N+VGN+G +I+L TV VKL+ +PL+ K Y S A M+ I P++ ++E+F + + Q+ Sbjct: 386 NIVGNWGWSIILLTVLVKLILWPLSSKSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQE- 444 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+RHAP+ WI+DL+A DP I Sbjct: 445 MMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELRHAPWMLWIQDLSAMDPWFIL 504 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 P++M +MFIQ ++P PAD QA + MP++F + F Sbjct: 505 -------------------PLLMGATMFIQQMLNPQPADPMQAKVFRIMPIIFTVFMLFF 545 Query: 535 PAGLIIYWSWSNVISIVQQAVIMK 558 PAGL++YW +N I+I QQ I K Sbjct: 546 PAGLVLYWIVNNTITITQQWFINK 569 >gi|269965283|ref|ZP_06179404.1| inner membrane protein, 60 kDa [Vibrio alginolyticus 40B] gi|269830084|gb|EEZ84312.1| inner membrane protein, 60 kDa [Vibrio alginolyticus 40B] Length = 540 Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 146/490 (29%), Positives = 238/490 (48%), Gaps = 47/490 (9%) Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 SI+ G NL Y ++ S+ V L + + F + I+L ++N Sbjct: 76 SIDTVGGDVVHANLNEYSAELDSSDSFVLL---KDAQGHQFIAQSGLVGPQGIDLSSTNR 132 Query: 141 VWNLISGKILTPTTP-----IKLVFKNANNILFERT-ISLDEHYLFKIVDTVTNNSIDQI 194 +S T + + F AN I + +T I Y + V NNS + Sbjct: 133 PHYNVSADSFTMADGQDELRVPMTF-TANGIEYTKTYIFKRGSYALNVEYDVVNNSGNNA 191 Query: 195 RFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWL 252 F + ++ + T G D + + D++ ++S N + W Sbjct: 192 TFGMYAHLRQNLMDDGGSITMPTYRGGAYSTEDTRYKKYSFDDMQDRNLSLNLADGQGWA 251 Query: 253 GISDKYWASVFIPSKE--TSFHSQ-FKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 + Y+A+ +IP E T+ +++ L D R K TI G L+ Sbjct: 252 AMIQHYFAAAWIPRNEPGTNLYTRVIGNLGDIGVRMPNK------TIATGDQAKFEATLW 305 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 G P + ++A P ++++D+GW +FIAKP+ ML+S+ + VGN+G+AI+ T Sbjct: 306 VG----PKLQDEMAEVA-PNLDLVVDYGWLWFIAKPLHMLLSFIQSFVGNWGVAIICLTF 360 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 V+ +PL K QY S A M+ +QPK+ +RE+ Q + + M++LYK +NPL G Sbjct: 361 IVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGG 419 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A D P+Y Sbjct: 420 CLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQD-----------PYY------ 462 Query: 490 VGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I P++M SMF+ KMSP D Q I+ +MPV+F F FP+GL++YW SN++ Sbjct: 463 --ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIV 520 Query: 549 SIVQQAVIMK 558 +++QQ +I K Sbjct: 521 TLIQQTLIYK 530 >gi|238750292|ref|ZP_04611794.1| Inner membrane protein oxaA [Yersinia rohdei ATCC 43380] gi|238711525|gb|EEQ03741.1| Inner membrane protein oxaA [Yersinia rohdei ATCC 43380] Length = 531 Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 148/525 (28%), Positives = 251/525 (47%), Gaps = 63/525 (12%) Query: 59 DDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 D +QA+ S + +L K L +IN +G D NL Y + S+ L Sbjct: 29 DKASQAVPGSGQGQLITVKTDVLSLTINTRGGDIDQANLLAYPDALGSDKTFELL----E 84 Query: 116 TKNAYFAELDYVSTANN------------IELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 T + + T N E+P ++ V ++ P T F Sbjct: 85 TTPGFIYQAQSGLTGKNGPDNPANGERPLFEVPQTSFVLADGQDELRIPMT-----FTGK 139 Query: 164 NNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGV 216 + +F +T L + Y + V N S + + G++ +H+ T +N F + Sbjct: 140 DGSVFIKTFVLKRNDYAIGVDYHVKNASEAPLELTLFGQLKQSINLPKHR-DTGSNNFAL 198 Query: 217 QEGFIAVLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 A +KYS DIE ++ + W+ + +Y+A+ +IP+ + + Sbjct: 199 HTYRGAAFSSDETKYKKYSFSDIEDKNL-DITTKGGWVAMLQQYFATAWIPTANET--NT 255 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 F G+ F + I PG+ + L+ G P I +A P ++ + Sbjct: 256 FYSADLGNGLAAIGFKGAPVVIQPGEQKQLSATLWVG----PEIQDKMAAIA-PHLDLTV 310 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GW +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QP Sbjct: 311 DYGWLWFISQPLFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQP 370 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 K+ +RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+R Sbjct: 371 KLAAMRERIGDD-KQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELR 429 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-AD 513 HAPF WI DL+A D P+Y I PI+M ++M+ KMSP D Sbjct: 430 HAPFIWWIHDLSAQD-----------PYY--------ILPILMGITMYFIQKMSPTTVTD 470 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F FPAGL++Y+ SN+++I+QQ +I + Sbjct: 471 PMQQKIMTFMPVIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 515 >gi|238759578|ref|ZP_04620740.1| Inner membrane protein oxaA [Yersinia aldovae ATCC 35236] gi|238702237|gb|EEP94792.1| Inner membrane protein oxaA [Yersinia aldovae ATCC 35236] Length = 531 Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 151/519 (29%), Positives = 251/519 (48%), Gaps = 51/519 (9%) Query: 59 DDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPS 114 D +QA+ S + +L K L +IN +G + NL Y + S+ L +P+ Sbjct: 29 DKASQAVPGSGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELLETTPA 88 Query: 115 NTKNAYFAELDYVSTAN--NIELP---NSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 A N N E P T + L G+ I L F + +F Sbjct: 89 FVYQAQSGLTGKSGPDNPANGERPLFETPQTSFVLADGQ---DELRIPLTFTGKDGSVFI 145 Query: 170 RTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGVQEGFIA 222 +T L + Y + V N S + + G++ +H+ T +N F + A Sbjct: 146 KTFVLKRNDYAIGVDYHVKNASAAPLELTLFGQLKQSINLPKHR-DTGSNNFALHTYRGA 204 Query: 223 VLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 +KYS DIE S+ + W+ + +Y+A+ +IP+ + + F Sbjct: 205 AYSSDETKYKKYSFSDIEDKSL-DITTKGGWVAMLQQYFATAWIPTANET--NTFYSADL 261 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G+ F + I PG++ L+ G P I +A P ++ +D+GW + Sbjct: 262 GNGLAAIGFKGAPVVIQPGEAKQLGATLWVG----PEIQDKMAAIA-PHLDLTVDYGWLW 316 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +R Sbjct: 317 FISQPLFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMR 376 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF Sbjct: 377 ERIGDD-KQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFIL 435 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI DL+A D P+Y I PI+M ++M+ KMSP D Q I Sbjct: 436 WIHDLSAQD-----------PYY--------ILPILMGITMYFIQKMSPTTVTDPMQQKI 476 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +MPV+F FPAGL++Y+ SN+++I+QQ +I + Sbjct: 477 MTFMPVIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 515 >gi|284007059|emb|CBA72334.1| inner membrane protein [Arsenophonus nasoniae] Length = 545 Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 151/578 (26%), Positives = 276/578 (47%), Gaps = 70/578 (12%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + + +S +I W++ P K Q VKQ + + A L ++ Sbjct: 4 QRNLLFIAWLFVSFLIWQTWESDKTQPI--------KTDQIVKQMDMPSHDDQANLGHEQ 55 Query: 62 AQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A+ +++ V EL+ IN +G D +L Y ++ S+ P L +K+ Sbjct: 56 AKFITVKTDVLELR-------INTRGGDIDGADLLLYPKELHSSDPFRLL---ETSKDFI 105 Query: 121 FAELDYVSTANNIELPNSN-----------TVWNLISGKILTPTTPIKLVFKNANNILFE 169 + + + + P N T + L G+ + L F + ++++ Sbjct: 106 YQAQSGLIGQDGPDNPGYNNGLRPLYLSTATSYALQDGQ---DELRVPLTFTGKDGVVYQ 162 Query: 170 RTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFIAV 223 + L Y + + N S + + G++ + + T +N F + A Sbjct: 163 KVYVLKRGKYNISVEYNIDNKSAKPLSLAFFGQLKQTVELPKERDTGSNNFALHTYRGAA 222 Query: 224 LGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 +KYS DI +++ N + W+ + +Y+A+ +IP + + F + Sbjct: 223 YSSDETNYKKYSFSDITDNNL-NVNSKGGWIAMLQQYFATAWIPGYQN--QNTFYTIDLD 279 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 A + ++ IT+ T+ L+ G P + E P ++ +D+GW +F Sbjct: 280 KAIAIIGYKSSPITVAANSKENYTSTLWVG----PELQA-EMAAVAPHLDLTVDYGWLWF 334 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I++P+F L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ ++E Sbjct: 335 ISQPLFKLLKFIHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMKE 394 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + Q + + M+ LYK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF GW Sbjct: 395 RIGDDK-QRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFIGW 453 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL 520 I+DL+A D P+Y I P++M L+M+I KMSP D Q I+ Sbjct: 454 IQDLSAQD-----------PYY--------ILPLLMGLTMYIIQKMSPTTVTDPMQQKIM 494 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 495 TYMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQIIYR 532 >gi|224585641|ref|YP_002639440.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254778158|sp|C0Q2L3|OXAA_SALPC RecName: Full=Inner membrane protein oxaA gi|224470169|gb|ACN47999.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 548 Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 148/538 (27%), Positives = 250/538 (46%), Gaps = 81/538 (15%) Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS- 112 A D A + +K L +IN +G + L Y ++ SN P L + Sbjct: 44 AGSAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLLETT 103 Query: 113 ----------------PSNTKNA----YFAELDYVSTA---NNIELPNSNTVWNLISGKI 149 P N N Y E D A N +++P + T +G Sbjct: 104 PQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTD---AAGNT 160 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR----- 204 T T VFK + Y + +V N + S G++ + Sbjct: 161 FTKT----FVFKRGD-------------YAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLP 203 Query: 205 -HKPQTATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWAS 261 H+ T ++ F + G D+ + K+ I + N W+ + +Y+A+ Sbjct: 204 PHR-DTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFAT 262 Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 +IP + + + F + G+ + A + + PG++ T+ L+ G P I Sbjct: 263 AWIPRNDGT--NNFYTANLGNGIVAIGYKAQPVLVQPGQTSAMTSTLWVG----PEIQDK 316 Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 +A P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K Sbjct: 317 MAAVA-PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKA 375 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 QY S A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F Sbjct: 376 QYTSMAKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFL 434 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A+Y ++ S+E+RHAPF WI DL+A D P+Y I PI+M ++M Sbjct: 435 ALYYMLMGSIELRHAPFALWIHDLSAQD-----------PYY--------ILPILMGVTM 475 Query: 502 FIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F KMSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 476 FFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|261250645|ref|ZP_05943220.1| OxaI/YidC membrane insertion protein [Vibrio orientalis CIP 102891] gi|260939214|gb|EEX95201.1| OxaI/YidC membrane insertion protein [Vibrio orientalis CIP 102891] Length = 541 Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 152/523 (29%), Positives = 244/523 (46%), Gaps = 55/523 (10%) Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 S+A L AQ + + + + L SI+ G + +L Y ++ S P V L Sbjct: 47 SFADELDPAPAQQQASAKTITVTTDVLTLSIDTVGGDVINADLNQYSNELDSEDPFVLL- 105 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNI 166 N F + I+L ++N +S T I + F AN + Sbjct: 106 --KNEAGHQFIAQSGLVGPQGIDLSSTNRPAYSVSADSFTLADGQDELRIPMTF-TANGL 162 Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-----VQEGF 220 + +T + Y + + N S + F + H Q+ + G G Sbjct: 163 EYTKTFVMKRGSYAIDVEYDIVNKSGNNATFG----MYAHLRQSLLDAGGSITMPTYRGG 218 Query: 221 IAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETS---FHSQFK 276 D + + D++ ++S N W + Y+AS +IP E + Sbjct: 219 AYSTEDTRYKKYSFDDMQDRNLSLNLANGQGWAAMIQHYFASAWIPRNEPGANLYTRVIG 278 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 L D R K TI G S L+ G P + ++A P ++++D+ Sbjct: 279 NLGDIGVRMPNK------TIADGDSANFQATLWVG----PKLQDQMAEVA-PNLDLVVDY 327 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW +FIAKP+ L+S+ + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ Sbjct: 328 GWLWFIAKPLHTLLSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKL 387 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +RE+ Q + + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+ Sbjct: 388 QAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPLVLQMPIFIALYWALMESVELRHS 446 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKG 515 PF+GWI DL+A D P+Y I P++M SMF+ KMSP D Sbjct: 447 PFFGWIHDLSAQD-----------PYY--------ILPLLMGASMFLIQKMSPTTVTDPM 487 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 488 QQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYK 530 >gi|71281074|ref|YP_271688.1| inner membrane protein, 60 kDa [Colwellia psychrerythraea 34H] gi|71146814|gb|AAZ27287.1| inner membrane protein, 60 kDa [Colwellia psychrerythraea 34H] Length = 543 Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 139/504 (27%), Positives = 250/504 (49%), Gaps = 62/504 (12%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE------- 123 + + +LI IN +G + LR + + ++ P T+L N K Y A+ Sbjct: 71 ITVTTDTLILKINSQGGDIVEAKLRKFDTEQGNDIPF-TILQNGNQK--YIAQSGLTGAN 127 Query: 124 -LD--------YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 +D Y S N+ EL N N + +L+ + + + F + + S+ Sbjct: 128 GIDRTIKGRPIYTSAKNSYELVNDNLIVDLVFHDVSGMSVTKRFTFN-------KNSYSV 180 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP-QTATNTFGVQEGFIAVLGDKSLVEQK 233 + YL + NN+ + + G++ + +T G ++ + Sbjct: 181 NVDYL------IDNNTANSVSVQMYGQLKQSTVVETGGGMLPTYRGAAYSTTEERYEKYD 234 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + DIE++++ N + W+ + + Y+ S ++P+ + S Y ++ A F A Sbjct: 235 FDDIEEANL-NAVTAGGWIAMLEHYFVSAWVPNAKDSNQLYTTYSNNFEAVI--GFKAPA 291 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + I GK +T+ +AG K+ + P ++ ID+G+ + I++P+F L+ Sbjct: 292 VIIDAGKQGSTSAIFYAGPKDQEVLEKIA-----PNLDLTIDYGFLWMISQPLFWLLLTI 346 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + V N+G+AI++ T+ VK +PL K QY S A M+++ PK+ +L+E+F Q + + Sbjct: 347 QSFVTNWGVAIIIITLIVKGGMYPLTKAQYTSMAKMRDLAPKMAQLKERFGDDR-QKMSQ 405 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A +++Y+ +NP GC P++LQ+P+F A+Y V S+E+RHAPF WI+DL+A D Sbjct: 406 ATMEMYRKEKVNPAGGCLPLILQMPIFLALYWVFLESVELRHAPFVFWIQDLSAMD---- 461 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 PF+ + P++M +SM++ KM P D Q I+ +MPVVF ++ Sbjct: 462 -------PFF--------VLPVLMGISMYVMQKMQPMTIQDPMQQKIMQYMPVVFSIFMA 506 Query: 533 SFPAGLIIYWSWSNVISIVQQAVI 556 FP+GL++YW SN+ISI Q +I Sbjct: 507 WFPSGLVLYWLVSNLISITQMKII 530 >gi|123444346|ref|YP_001008311.1| putative inner membrane protein translocase component YidC [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122091307|emb|CAL14193.1| probable membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 548 Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 151/522 (28%), Positives = 255/522 (48%), Gaps = 57/522 (10%) Query: 59 DDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPS 114 D +QA+ S + +L K L +IN +G + NL Y + S+ L +P+ Sbjct: 46 DKASQAVPGSGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELLETTPA 105 Query: 115 NTKNAYFAELDYVSTANN--------IELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 A + L S +N E+P ++ V L G+ I L F + Sbjct: 106 FIYQAQ-SGLTGKSGPDNPANGERPLFEVPQTSFV--LADGQ---DELRIPLTFTGKDGS 159 Query: 167 LFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGVQEG 219 +F +T L + Y + + N S + + G++ +H+ T +N F + Sbjct: 160 VFTKTFVLKRNDYAIGVDYHIKNASAAPLELTLFGQLKQSINLPKHR-DTGSNNFALHTY 218 Query: 220 FIAVLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 A +KYS DIE S+ + W+ + +Y+A+ +IP+ + + F Sbjct: 219 RGAAYSSDETKYKKYSFSDIEDKSL-DITTKGGWVAMLQQYFATAWIPAANET--NTFYS 275 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 G+ F + I PG+ L+ G P I +A P ++ +D+G Sbjct: 276 ADLGNGLAAIGFKGAPVVIQPGEQKQLGATLWVG----PEIQDKMAAIA-PHLDLTVDYG 330 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ Sbjct: 331 WLWFISQPLFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLA 390 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAP Sbjct: 391 AMRERIGDD-KQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAP 449 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQ 516 F WI DL+A D P+Y I PI+M ++M+ KMSP D Q Sbjct: 450 FILWIHDLSAQD-----------PYY--------ILPILMGITMYFIQKMSPTTVTDPMQ 490 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ +MPV+F FPAGL++Y+ SN+++I+QQ +I + Sbjct: 491 QKIMTFMPVIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 532 >gi|258622952|ref|ZP_05717967.1| inner membrane protein, 60 kDa [Vibrio mimicus VM573] gi|258584735|gb|EEW09469.1| inner membrane protein, 60 kDa [Vibrio mimicus VM573] Length = 541 Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 130/404 (32%), Positives = 206/404 (50%), Gaps = 38/404 (9%) Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 AN I + +T L Y +V V NNS + + ++ + N G Sbjct: 159 QANGIDYTKTFILKRGSYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRG 218 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETS---FHSQF 275 D + + D++ ++S ++ + +W+ + Y+AS +IP E + Sbjct: 219 GAYSTSDVRYKKYSFDDMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVI 278 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 L D R K AN G L+ G P + +A P ++++D Sbjct: 279 NNLGDMGIRTPNKTIAN------GDKAEFEATLWVG----PKLQDQMAAVA-PNLDLVVD 327 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +FIAKP+ L+S+ + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK Sbjct: 328 YGWLWFIAKPLHWLLSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPK 387 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + +RE+ Q + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH Sbjct: 388 LQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRH 446 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 +PF+GWI DL+A D P+Y I P++M SMF+ KMSP D Sbjct: 447 SPFFGWIHDLSAQD-----------PYY--------ILPLLMGASMFVIQKMSPTTITDP 487 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 488 MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531 >gi|126668973|ref|ZP_01739912.1| putative inner membrane protein translocase component YidC [Marinobacter sp. ELB17] gi|126626557|gb|EAZ97215.1| putative inner membrane protein translocase component YidC [Marinobacter sp. ELB17] Length = 593 Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 130/406 (32%), Positives = 213/406 (52%), Gaps = 36/406 (8%) Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP--QTATNTFGVQE--GF 220 NI+ T + D+ Y I + N S ++ + + G+I+R + QT+ N+ G++ G Sbjct: 214 NIIKRFTFNRDD-YQIDIRYLIDNRSENEWQANFTGKIVRDQAGDQTSQNSMGIKAFLGL 272 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + + + D++ I N +N W+ Y+ + ++P E +QF+ Sbjct: 273 VVSTPEDPYEKYDFDDLKDKPI-NQSVTNGWMAFLQHYFLTAWVP--EPDQQAQFQTTRR 329 Query: 281 GH-ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G A + A + + G+++ + G K I E P + +D+GW Sbjct: 330 GPLAVMGFVYPATNVPV--GETVEVGASAYVGPK---IIDRLET--VAPNLDRTVDFGWL 382 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +FI+ P+F+++++F+ ++GN+G++I+L TV VK LFF L+ Y S A M+ + PK+ + Sbjct: 383 FFISLPLFVVLNWFHGIIGNWGVSIILLTVLVKGLFFHLSATSYRSMARMRAVAPKLARM 442 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E + Q + M+ LYK INPL GC PIL+Q+PVF ++Y V+ S+++RHAPF Sbjct: 443 KELYGDD-RQRMSTEMMALYKREKINPLGGCLPILVQMPVFISLYWVLFESVQLRHAPFA 501 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+ DP I PIIM SM +QM ++P P D QA I Sbjct: 502 LWIHDLSVMDPYFIL-------------------PIIMGASMMLQMHLNPTPPDPMQAKI 542 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + MPVVF FPAGL++YW +NV+SI QQ I + A++ Sbjct: 543 MKLMPVVFTIFFLWFPAGLVLYWVVNNVLSISQQWYITRKIEAQMA 588 >gi|56415715|ref|YP_152790.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161616962|ref|YP_001590927.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168234429|ref|ZP_02659487.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168464827|ref|ZP_02698719.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194468665|ref|ZP_03074649.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197249737|ref|YP_002148779.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197364643|ref|YP_002144280.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|238913094|ref|ZP_04656931.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|81678053|sp|Q5PKU2|OXAA_SALPA RecName: Full=Inner membrane protein oxaA gi|189036360|sp|A9MX83|OXAA_SALPB RecName: Full=Inner membrane protein oxaA gi|254773019|sp|B5EYX5|OXAA_SALA4 RecName: Full=Inner membrane protein oxaA gi|254778159|sp|B5BIL8|OXAA_SALPK RecName: Full=Inner membrane protein oxaA gi|56129972|gb|AAV79478.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161366326|gb|ABX70094.1| hypothetical protein SPAB_04783 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194455029|gb|EDX43868.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195632342|gb|EDX50826.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197096120|emb|CAR61716.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213440|gb|ACH50837.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205331641|gb|EDZ18405.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 548 Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 148/538 (27%), Positives = 250/538 (46%), Gaps = 81/538 (15%) Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS- 112 A D A + +K L +IN +G + L Y ++ SN P L + Sbjct: 44 AGSAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLLETT 103 Query: 113 ----------------PSNTKNA----YFAELDYVSTA---NNIELPNSNTVWNLISGKI 149 P N N Y E D A N +++P + T +G Sbjct: 104 PQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTD---AAGNT 160 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR----- 204 T T VFK + Y + +V N + S G++ + Sbjct: 161 FTKT----FVFKRGD-------------YAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLP 203 Query: 205 -HKPQTATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWAS 261 H+ T ++ F + G D+ + K+ I + N W+ + +Y+A+ Sbjct: 204 PHR-DTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFAT 262 Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 +IP + + + F + G+ + A + + PG++ T+ L+ G P I Sbjct: 263 AWIPRNDGT--NNFYTANLGNGIVAIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDK 316 Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 +A P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K Sbjct: 317 MAAVA-PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKA 375 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 QY S A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F Sbjct: 376 QYTSMAKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFL 434 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A+Y ++ S+E+RHAPF WI DL+A D P+Y I PI+M ++M Sbjct: 435 ALYYMLMGSIELRHAPFALWIHDLSAQD-----------PYY--------ILPILMGVTM 475 Query: 502 FIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F KMSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 476 FFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|253690653|ref|YP_003019843.1| 60 kDa inner membrane insertion protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259515701|sp|C6DK98|OXAA_PECCP RecName: Full=Inner membrane protein oxaA gi|251757231|gb|ACT15307.1| 60 kDa inner membrane insertion protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 544 Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 149/574 (25%), Positives = 264/574 (45%), Gaps = 63/574 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + IAL + WQ + E N Q ++Q N+ + Sbjct: 4 QRN---LLLIALLFVTFMLWQAW------ETDKNPPATTQAIQQ---ATNAVTGDATNQG 51 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A + +K L +IN +G + +L Y + S+ P L T + Sbjct: 52 VPASGQGKLITVKTDVLSLTINTRGGDVEQAHLLAYPDTLGSDKPFHLL---ETTSEFVY 108 Query: 122 AELDYVSTANNIELP---------NSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 ++ N + P + + L G+ I + + A+ + + +T Sbjct: 109 QAQSGLTGKNGPDNPANGPRPLFTTTQDSFELADGQ---NELRIPMTYTAADGVTYTKTF 165 Query: 173 SLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGVQEGFIAVLG 225 L Y + +V N S + + G++ +H+ T ++ F + A Sbjct: 166 VLKRGDYALNVDYSVNNTSAQPLELTLFGQLKQSIDLPKHR-DTGSSNFALHTYRGAAFS 224 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 +KYS + N ++ W+ + +Y+A+ +IP+ T+ + F G+ + Sbjct: 225 SSEDKYKKYSFSDMDENLNITTNSGWVAMLQQYFATAWIPT--TAGANTFYTNKLGNGQA 282 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 F A + + G L+ G P I +A P ++ +D+GW +FI++P Sbjct: 283 AIGFKAAPVVVAAGSQQNLNATLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 337 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 338 LFKLLKFLHGFIGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKLQAMRERIGD 397 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK+ +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 398 D-KQRMSQEMMALYKSEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDL 456 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 457 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTYMP 497 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 498 VIFTVFFLWFPSGLVMYYIVSNLVTILQQQLIYR 531 >gi|312964014|ref|ZP_07778485.1| preprotein translocase YidC subunit [Pseudomonas fluorescens WH6] gi|311282049|gb|EFQ60659.1| preprotein translocase YidC subunit [Pseudomonas fluorescens WH6] Length = 567 Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 113/315 (35%), Positives = 179/315 (56%), Gaps = 27/315 (8%) Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 ++ + W+ Y+ + +IP + ++ D Y ++ +T+ PG Sbjct: 269 TYNVNGGWVAWLQHYFVTAWIP--QPGQNNAVLARKDSKGNYIIGYTGPAMTVAPGAKAE 326 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+AG K + K+L+ P E+ +D+G +FIA+P+F L+ + +++VGN+G + Sbjct: 327 TSATLYAGPKSQAVL----KELS-PGLELTVDYGILWFIAQPIFWLLQHIHSIVGNWGWS 381 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Q + +AM++LYK Sbjct: 382 IIFLTMLIKGLFFPLSAASYKSMARMRAVAPKLAALKEQHGDDR-QKMSQAMMELYKKEK 440 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 INPL GC PIL+Q+PVF ++Y V+ S+EMR APF WI DL+ D PF+ Sbjct: 441 INPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFMLWITDLSIKD-----------PFF 489 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 I PIIM +MFIQ +++P P D QA ++ MP++F F FPAGL++YW Sbjct: 490 --------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFPAGLVLYWV 541 Query: 544 WSNVISIVQQAVIMK 558 +NV+SI QQ I + Sbjct: 542 VNNVLSISQQWYITR 556 >gi|238797847|ref|ZP_04641339.1| Inner membrane protein oxaA [Yersinia mollaretii ATCC 43969] gi|238718263|gb|EEQ10087.1| Inner membrane protein oxaA [Yersinia mollaretii ATCC 43969] Length = 531 Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 151/522 (28%), Positives = 255/522 (48%), Gaps = 57/522 (10%) Query: 59 DDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPS 114 D +QA+ S + +L K L +IN +G + NL Y + S+ L +P+ Sbjct: 29 DKASQAVPASGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELLETTPA 88 Query: 115 NTKNAYFAELDYVSTANN--------IELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 A + L S +N E+P ++ V L G+ I L F + Sbjct: 89 FVYQAQ-SGLTGKSGPDNPANGERPLFEVPQTSFV--LADGQ---DELRIPLTFTGKDGS 142 Query: 167 LFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGVQEG 219 +F +T L + Y + V N S + + G++ +H+ T +N F + Sbjct: 143 VFTKTFVLKRNDYAIGVDYHVKNASDAPLELTLFGQLKQSINLPKHR-DTGSNNFALHTY 201 Query: 220 FIAVLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 A +KYS DIE ++ + W+ + +Y+A+ +IP+ + + F Sbjct: 202 RGAAFSSDDTKYKKYSFSDIEDKTL-DITTKGGWVAMLQQYFATAWIPAANET--NTFYS 258 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 G+ F + I PG+ L+ G P I +A P ++ +D+G Sbjct: 259 ADLGNGLAAIGFKGMPVVIQPGEQKQLGATLWVG----PEIQDKMAAIA-PHLDLTVDYG 313 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ Sbjct: 314 WLWFISQPLFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLA 373 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAP Sbjct: 374 AMRERIGDD-KQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAP 432 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQ 516 F WI DL+A D P+Y I PI+M ++M+ KMSP D Q Sbjct: 433 FILWIHDLSAQD-----------PYY--------ILPILMGITMYFIQKMSPTTVTDPMQ 473 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ +MPV+F FPAGL++Y+ SN+++I+QQ +I + Sbjct: 474 QKIMTFMPVIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 515 >gi|121730052|ref|ZP_01682461.1| inner membrane protein, 60 kDa [Vibrio cholerae V52] gi|121628201|gb|EAX60724.1| inner membrane protein, 60 kDa [Vibrio cholerae V52] Length = 510 Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 129/404 (31%), Positives = 202/404 (50%), Gaps = 38/404 (9%) Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 AN I + +T L Y +V V NNS + + ++ + N G Sbjct: 128 QANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRG 187 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETS---FHSQF 275 D + + D++ ++S ++ + +W+ + Y+AS +IP E + Sbjct: 188 GAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVI 247 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 L D R K AN G L+ G K + P ++++D Sbjct: 248 NNLGDMGIRTPNKTIAN------GDKAEFEATLWVGPK-----LQDQMAATAPNLDLVVD 296 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +FIAKP+ L+S VGN+G+AI+ T V+ +PL K QY S A M+ +QPK Sbjct: 297 YGWLWFIAKPLHWLLSVIQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPK 356 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + +RE+ Q + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH Sbjct: 357 LQAMRERIGDDR-QRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRH 415 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 +PF+GWI DL+A D P+Y I P++M SMF+ KMSP D Sbjct: 416 SPFFGWIHDLSAQD-----------PYY--------ILPLLMGASMFVIQKMSPTTITDP 456 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 457 MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 500 >gi|308188769|ref|YP_003932900.1| Inner membrane protein yidC [Pantoea vagans C9-1] gi|308059279|gb|ADO11451.1| Inner membrane protein yidC [Pantoea vagans C9-1] Length = 548 Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 124/413 (30%), Positives = 213/413 (51%), Gaps = 38/413 (9%) Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ-IRFSPRGRIM------RHKPQ 208 + + + N +++ +T VD NN+ Q + S G++ +H+ Sbjct: 149 VPMTYTAENGVVYTKTFIFKRGEYAVNVDYHVNNTTQQPLEVSLFGQLKQTIDLPKHR-D 207 Query: 209 TATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 T +N F + G + + K+ I + N SN W+ + +Y+A+ ++P Sbjct: 208 TGSNNFALHTFRGAAYSTSESKYEKYKFDTIADNENLNATTSNGWVAMLQQYFATAWVPR 267 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 E + L +G A + + +TI G L+ G P I +A Sbjct: 268 TEGTNTLYTSNLGNGVAA--IGYKSAPVTIAAGAQQNLGATLWVG----PEIQDKMAAIA 321 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S Sbjct: 322 -PHLDLTVDYGWLWFISQPLFKLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSM 380 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPKI +RE+ + Q+ M+ LYK +NPL GC P+++Q+P+F A+Y + Sbjct: 381 AKMRMLQPKIQAMRERLGDDKQKQSQE-MMALYKAEKVNPLGGCLPLVIQMPIFLALYYM 439 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 +S S+E+RHAPF WI DL+A D P+Y I PI+M ++MF K Sbjct: 440 LSGSVELRHAPFILWIHDLSAQD-----------PYY--------ILPILMGITMFFIQK 480 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 481 MSPTTVTDPMQQKIMTYMPVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|329297777|ref|ZP_08255113.1| membrane protein insertase [Plautia stali symbiont] Length = 548 Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 140/515 (27%), Positives = 244/515 (47%), Gaps = 69/515 (13%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS-----------------P 113 + +K L +IN +G + L Y + S++P L + P Sbjct: 61 ITVKTDVLSLNINTRGGDIEQAQLLTYPDKLGSDAPFQLLETTPAFVYQAQSGLTGRNGP 120 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 N N A Y ++ ++ E+ + T + L + N +++ +T Sbjct: 121 DNPNNG--ARPLYTASLDHFEMADGQTELR------------VPLSWTGENGVVYTKTFV 166 Query: 174 LDEHYLFKIVDTVTNNSIDQ-IRFSPRGRIM------RHKPQTATNTFGVQ--EGFIAVL 224 VD NN+ Q + + G++ +H+ T +N F + G Sbjct: 167 FKRGEFAVNVDYNINNASQQPLEVAMFGQLKLTIDLPKHR-DTGSNNFALHTFRGAAYST 225 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 D + K+ I + N SN W+ + +Y+A+ ++P + + L +G A Sbjct: 226 SDAKYEKYKFDTIADNENLNTTTSNGWVAMLQQYFATAWVPRTQGNNTLYTSNLGNGVAA 285 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + + +TI G L+ G P I +A P ++ +D+GW +FI++ Sbjct: 286 --IGYKSAPVTIAAGAQQDLGATLWVG----PEIQDKMAAIA-PHLDLTVDYGWLWFISQ 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 339 PLFKLLKFLHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI D Sbjct: 399 DD-KQKQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFVLWIHD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+A D P+Y I P+IM ++MF +MSP D Q I+ +M Sbjct: 458 LSAQD-----------PYY--------ILPVIMGITMFFIQRMSPTTVTDPMQQKIMTYM 498 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 PV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 499 PVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|254230607|ref|ZP_04923966.1| inner membrane protein OxaA [Vibrio sp. Ex25] gi|262392790|ref|YP_003284644.1| OxaI/YidC membrane insertion protein [Vibrio sp. Ex25] gi|151936867|gb|EDN55766.1| inner membrane protein OxaA [Vibrio sp. Ex25] gi|262336384|gb|ACY50179.1| OxaI/YidC membrane insertion protein [Vibrio sp. Ex25] Length = 540 Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 119/334 (35%), Positives = 189/334 (56%), Gaps = 38/334 (11%) Query: 232 QKYS--DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKE--TSFHSQ-FKYLSDGHARY 285 +KYS D++ ++S N + W + Y+A+ +IP E T+ +++ L D R Sbjct: 228 KKYSFDDMQDRNLSLNLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGDIGVRM 287 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 K TI G L+ G P + ++A P ++++D+GW +FIAKP Sbjct: 288 PNK------TIATGDQAKFEATLWVG----PKLQDEMAEVA-PNLDLVVDYGWLWFIAKP 336 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + ML+S+ + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Sbjct: 337 LHMLLSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD 396 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL Sbjct: 397 D-RQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDL 455 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I P++M SMF+ KMSP D Q I+ +MP Sbjct: 456 SAQD-----------PYY--------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMP 496 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F F FP+GL++YW SN+++++QQ +I K Sbjct: 497 VMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYK 530 >gi|169797810|ref|YP_001715603.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii AYE] gi|213155394|ref|YP_002317439.1| inner membrane protein OxaA [Acinetobacter baumannii AB0057] gi|215485157|ref|YP_002327398.1| Inner membrane protein oxaA [Acinetobacter baumannii AB307-0294] gi|301345949|ref|ZP_07226690.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii AB056] gi|301510086|ref|ZP_07235323.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii AB058] gi|301594676|ref|ZP_07239684.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii AB059] gi|332854709|ref|ZP_08435496.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6013150] gi|332865589|ref|ZP_08436429.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6013113] gi|169150737|emb|CAM88649.1| Inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase [Acinetobacter baumannii AYE] gi|213054554|gb|ACJ39456.1| inner membrane protein OxaA [Acinetobacter baumannii AB0057] gi|213985979|gb|ACJ56278.1| Inner membrane protein oxaA [Acinetobacter baumannii AB307-0294] gi|332727866|gb|EGJ59268.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6013150] gi|332735241|gb|EGJ66318.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6013113] Length = 586 Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 154/525 (29%), Positives = 250/525 (47%), Gaps = 68/525 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD---------------- 125 IN KG + L + SN P V L ++ K Y A+ Sbjct: 96 INPKGGDIVRIELLSHDKSKDSNQPFVML--ENDAKRTYVAQSGLIGLNGPDSSRGGRPL 153 Query: 126 YVSTANNIELPNSNTVWNLI--SGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKI 182 Y + L ++ V + S K+LT + +VFK + +T + + Y + Sbjct: 154 YAVEKTSYTLADAKGVQDQSGHSEKVLT----VPMVFKTPEGVEIIKTFTFTQGQYPIVV 209 Query: 183 VDTVTNNSIDQIRFSPRGRIMRH------KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 V N S + G++ R K T G G D + K+++ Sbjct: 210 KHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFLGGAWGTPDAHYNKLKFAN 269 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPS--KETSFHSQFKYLSDGHARYQAK------ 288 + + N W+ + Y+ S +IP K T + Q Y++ +R A Sbjct: 270 FSEEKL-NTEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQ-PYVAKLESRQSADHMNIIG 327 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F++ I + G S+ L++G P + KDLA+ +D+GW + IAK +F+ Sbjct: 328 FTSPVINVPAGTSMEVDAKLYSG----PKVQSELKDLAV-GLNQTVDYGWLWPIAKLLFL 382 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ I P++ ++E+F + Sbjct: 383 GLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRVIAPEMQRMKEEFGEDRM 442 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + Q+ M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+RHAP+ GWI+DL+A Sbjct: 443 RFSQE-MMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELRHAPWLGWIQDLSAM 501 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P+IM +MF Q ++P PAD QA + MP++F Sbjct: 502 DPWFIL-------------------PLIMGATMFAQQMLNPQPADPMQAKVFRIMPIMFT 542 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + FPAGL++YW +N I+I+QQ I K E I + ST Sbjct: 543 VFMLFFPAGLVLYWIVNNSITILQQWFINK--SVEKSRISKAEST 585 >gi|146313779|ref|YP_001178853.1| putative inner membrane protein translocase component YidC [Enterobacter sp. 638] gi|166975863|sp|A4WGH2|OXAA_ENT38 RecName: Full=Inner membrane protein oxaA gi|145320655|gb|ABP62802.1| protein translocase subunit yidC [Enterobacter sp. 638] Length = 548 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 139/521 (26%), Positives = 251/521 (48%), Gaps = 47/521 (9%) Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A D A ++ +K L +IN +G + L Y ++ SN P L Sbjct: 44 AGSAADQGVPASGQGKQITVKTDVLELTINTRGGDIEQALLLTYPKELKSNEPFQLL--- 100 Query: 114 SNTKNAYFAELDYVSTANNIELP--NSNTVWNLISGKILTPTT----PIKLVFKNANNIL 167 T + ++ + + P + ++N+ + I + + +A Sbjct: 101 ETTPEFLYQAQSGLTGRDGPDNPANGARPLYNVDKDTFVMADGQNELAIPMTYTDAAGNT 160 Query: 168 FERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQTATNTFGVQ--E 218 F +T +L Y + V N S + S G++ + H+ T ++ F + Sbjct: 161 FTKTFTLKRGEYAVSVGYNVQNTSAKPLEVSTFGQLKQSINLPSHR-DTGSSNFALHTFR 219 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G D + K+ I + N W+ + +Y+A+ ++P+ + + F Sbjct: 220 GAAYSTPDTKYEKYKFDTIADNENLNVSAKGGWVAMLQQYFATAWVPNNDGV--NNFYTA 277 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + G+ + + + + PG++ T + L+ G P I + +A P ++ +D+GW Sbjct: 278 NLGNGIAAIGYKSQPVLVQPGQTGTLGSTLWVG----PEIQNKMAAVA-PHLDLTVDYGW 332 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI Sbjct: 333 LWFISQPLFKLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIAA 392 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +RE+ Q + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF Sbjct: 393 MRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPF 451 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQA 517 WI DL+A D P+Y I PI+M ++MF KMSP D Q Sbjct: 452 ALWIHDLSAQD-----------PYY--------ILPILMGITMFFIQKMSPTTVTDPMQQ 492 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 493 KIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|226326926|ref|ZP_03802444.1| hypothetical protein PROPEN_00786 [Proteus penneri ATCC 35198] gi|225204763|gb|EEG87117.1| hypothetical protein PROPEN_00786 [Proteus penneri ATCC 35198] Length = 322 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 109/330 (33%), Positives = 191/330 (57%), Gaps = 29/330 (8%) Query: 232 QKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS DIE ++S +N W+ + +Y+A+ ++PSK++ + + + + + Sbjct: 6 KKYSFGDIEDKNLS-LTTNNGWVAMLQQYFATAWVPSKDSQNNQFYTITLENKSIALIGY 64 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + +TI P + ++ L+ G P I +A P ++ +D+GW +FI++P+F L Sbjct: 65 KSAPVTIAPNSTADISSTLWVG----PEIQSEMSAIA-PHLDLSVDYGWLWFISQPLFKL 119 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ LRE+ Q Sbjct: 120 LKFLHSFIGNWGFSIIMITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAALRERIGDD-KQ 178 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI+DL+A D Sbjct: 179 RMSQEMMALYKQEKVNPLGGCLPLIIQMPIFLALYYMLMGSVELRHAPFMLWIQDLSAQD 238 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I P++M ++MFI K+SP D Q I+ +MPVVF Sbjct: 239 PYYIL-------------------PLLMGVTMFIIQKLSPTAVTDPMQQKIMTFMPVVFT 279 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 280 VFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 309 >gi|261868618|ref|YP_003256540.1| putative inner membrane protein translocase component YidC [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413950|gb|ACX83321.1| putative inner membrane protein translocase component YidC [Aggregatibacter actinomycetemcomitans D11S-1] Length = 543 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 162/570 (28%), Positives = 277/570 (48%), Gaps = 78/570 (13%) Query: 13 LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVE 72 +S I+ WQ Y P+ + E+ P + A + D +A+ + Sbjct: 15 MSFIVYQQWQLDYHTPK--PVTTEQTAASASDVPASSNAGNAVIATDTQAKG----KIIT 68 Query: 73 LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT-KNAYFAE-------- 123 L+N IN G L Y ++ SN+P + L NT ++ Y A+ Sbjct: 69 LENDVFCLKINTLGGDVVSSELLKYDAELDSNTPFMLL---QNTPQHVYIAQSGLIGKDG 125 Query: 124 -------LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 DY + +N +L + ++ P +K + + + + +L Sbjct: 126 IDTKSGRADYQADGDNFKLADGQN-------ELSVPLVYVK------DGVTYRKVFTLKR 172 Query: 177 -HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKY 234 Y + + N S I P G++ +++ N G + + + + Sbjct: 173 GEYNIAVNYEINNQSDKTIEVEPYGQLRHTLVESSGNVAMPTYTGGAYSSSETNYKKYSF 232 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD-----GHARYQAKF 289 SD+E +++S + W+ + Y+ S +IP+++ +Q L D G Y+ Sbjct: 233 SDMENANLS-INTKAGWVAVLQHYFVSAWIPNQDAD--NQLYTLIDKANNIGSIGYRGPV 289 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + +I P + T T+ L+ G P + + +A ++ +D+GW +FIAKP+F L Sbjct: 290 T----SIQPNTTETLTSKLWTG----PKLQNEMAQVA-NHLDLTVDYGWAWFIAKPLFWL 340 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +++ LV N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F + Q Sbjct: 341 LTFIQKLVHNWGVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKLREMRERFGED-RQ 399 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M++LYK +NPL GC P+LLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D Sbjct: 400 RMSQEMMKLYKDEKVNPLGGCLPLLLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD 459 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P+Y I PI+M SMF+ KMSP P AD Q ++ +MP++F+ Sbjct: 460 -----------PYY--------ILPILMGASMFLLQKMSPTPVADPMQQKVMTFMPLIFM 500 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW SN+I+I+QQ +I + Sbjct: 501 VFFLWFPAGLVLYWLVSNLITIIQQQLIYR 530 >gi|205354571|ref|YP_002228372.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859068|ref|YP_002245719.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|254773021|sp|B5QUQ4|OXAA_SALEP RecName: Full=Inner membrane protein oxaA gi|254773022|sp|B5RFY3|OXAA_SALG2 RecName: Full=Inner membrane protein oxaA gi|205274352|emb|CAR39377.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710871|emb|CAR35235.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326629707|gb|EGE36050.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 548 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 148/538 (27%), Positives = 250/538 (46%), Gaps = 81/538 (15%) Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS- 112 A D A + +K L +IN +G + L Y ++ SN P L + Sbjct: 44 AGSAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLLETT 103 Query: 113 ----------------PSNTKNA----YFAELDYVSTA---NNIELPNSNTVWNLISGKI 149 P N N Y E D A N +++P + T +G Sbjct: 104 PQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTD---AAGNT 160 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR----- 204 T T VFK + Y + +V N + S G++ + Sbjct: 161 FTKT----FVFKRGD-------------YAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLP 203 Query: 205 -HKPQTATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWAS 261 H+ T ++ F + G D+ + K+ I + N W+ + +Y+A+ Sbjct: 204 PHR-DTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFAT 262 Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 +IP + + + F + G+ + A + + PG++ T+ L+ G P I Sbjct: 263 AWIPRNDGT--NNFYTANLGNGIVAIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDK 316 Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 +A P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K Sbjct: 317 MAAVA-PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKA 375 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 QY S A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F Sbjct: 376 QYTSMAKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFL 434 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A+Y ++ S+E+RHAPF WI DL+A D P+Y I PI+M ++M Sbjct: 435 ALYYMLMGSIELRHAPFALWIHDLSAQD-----------PYY--------ILPILMGVTM 475 Query: 502 FIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F KMSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 476 FFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|16762484|ref|NP_458101.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143972|ref|NP_807314.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052693|ref|ZP_03345571.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213424948|ref|ZP_03357698.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|38503116|sp|Q8Z2N7|OXAA_SALTI RecName: Full=Inner membrane protein oxaA gi|25299103|pir||AF0957 probable membrane protein STY3938 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504789|emb|CAD03154.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139608|gb|AAO71174.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 548 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 147/533 (27%), Positives = 249/533 (46%), Gaps = 81/533 (15%) Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS------ 112 D A + +K L +IN +G + L Y ++ SN P L + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLLETTPQFIY 108 Query: 113 -----------PSNTKNA----YFAELDYVSTA---NNIELPNSNTVWNLISGKILTPTT 154 P N N Y E D A N +++P + T +G T T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTD---AAGNTFTKT- 164 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQ 208 VFK + Y + +V N + S G++ + H+ Sbjct: 165 ---FVFKRGD-------------YAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHR-D 207 Query: 209 TATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 T ++ F + G D+ + K+ I + N W+ + +Y+A+ +IP Sbjct: 208 TGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPR 267 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + + F + G+ + A + + PG++ T+ L+ G P I +A Sbjct: 268 NDGT--NNFYTANLGNGIVAIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA 321 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S Sbjct: 322 -PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSM 380 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F A+Y + Sbjct: 381 AKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYM 439 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + S+E+RHAPF WI DL+A D P+Y I PI+M ++MF K Sbjct: 440 LMGSIELRHAPFALWIHDLSAQD-----------PYY--------ILPILMGVTMFFIQK 480 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 481 MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|117918465|ref|YP_867657.1| protein translocase subunit yidC [Shewanella sp. ANA-3] gi|166977418|sp|A0KR32|OXAA_SHESA RecName: Full=Inner membrane protein oxaA gi|117610797|gb|ABK46251.1| 60 kDa inner membrane insertion protein [Shewanella sp. ANA-3] Length = 541 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 143/498 (28%), Positives = 236/498 (47%), Gaps = 46/498 (9%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN-AYFAELDYV-- 127 + +K L IN G L + L+ + P V L TK+ Y A+ + Sbjct: 68 ITVKTDQLDVQINPVGGDIVFAALVSHKLEQGKDQPFVLL---EQTKDFTYIAQSGLIGR 124 Query: 128 -----STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 S + T + L G+ T + L + N + + + Sbjct: 125 DGIDSSAKGRAAFAANKTEFTLADGQ---DTLEVPLTYVADNGVTYTKVFVFHRGKFNVD 181 Query: 183 VD-TVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 +D + N S ++ G+I + KP ++ G D + K+ D+ KS Sbjct: 182 IDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTQDVRYEKYKFEDMSKS 241 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 ++ N W + Y+ S +IP S ++ F +S G F I PG Sbjct: 242 NL-NQPTLGGWAAMLQHYFVSAWIPPATDS-NTIFSSVSAG-GLANIGFRGAVYDIAPGA 298 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + ++ + G K+ + L +++D+G+ +++A P+ L+ ++ + VGN+ Sbjct: 299 TQEISSQFYVGPKDQKALSALSDTL-----NLVVDYGFLWWLAVPIHWLLMFYQSFVGNW 353 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + +AM++LYK Sbjct: 354 GVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGDDR-QKMGQAMMELYK 412 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ D Sbjct: 413 KEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQD----------- 461 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAGL 538 P+Y I P++M SMF+ KM P P D Q ++ WMP++F FP+GL Sbjct: 462 PYY--------ILPLLMGASMFVMQKMQPIAPTMDPMQVKMMQWMPMIFTVFFLWFPSGL 513 Query: 539 IIYWSWSNVISIVQQAVI 556 ++YW N+++I+QQ +I Sbjct: 514 VLYWLVGNIVAIIQQKII 531 >gi|258626076|ref|ZP_05720927.1| inner membrane protein, 60 kDa [Vibrio mimicus VM603] gi|258581602|gb|EEW06500.1| inner membrane protein, 60 kDa [Vibrio mimicus VM603] Length = 539 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 130/404 (32%), Positives = 205/404 (50%), Gaps = 38/404 (9%) Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 AN I + +T L Y +V V NNS + + ++ + N G Sbjct: 157 QANGIDYTKTFILKRGSYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRG 216 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETS---FHSQF 275 D + + D++ ++S ++ + +W + Y+AS +IP E + Sbjct: 217 GAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWAAMIQHYFASAWIPRNEPQAQLYSRVI 276 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 L D R K AN G L+ G P + +A P ++++D Sbjct: 277 NNLGDIGIRTPNKTIAN------GDKAEFEATLWVG----PKLQDQMAAVA-PNLDLVVD 325 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +FIAKP+ L+S+ + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK Sbjct: 326 YGWLWFIAKPLHWLLSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPK 385 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + +RE+ Q + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH Sbjct: 386 LQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRH 444 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 +PF+GWI DL+A D P+Y I P++M SMF+ KMSP D Sbjct: 445 SPFFGWIHDLSAQD-----------PYY--------ILPLLMGASMFVIQKMSPTTITDP 485 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 486 MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 529 >gi|127514791|ref|YP_001095988.1| 60 kDa inner membrane insertion protein [Shewanella loihica PV-4] gi|166977416|sp|A3QJT1|OXAA_SHELP RecName: Full=Inner membrane protein oxaA gi|126640086|gb|ABO25729.1| protein translocase subunit yidC [Shewanella loihica PV-4] Length = 542 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 138/499 (27%), Positives = 236/499 (47%), Gaps = 48/499 (9%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 + + L IN G L G+ L+ P V L TK+ Y+ + Sbjct: 69 ISVTTDQLTLKINPVGGDIVYSALVGHKLEQDKEEPFVLL---QQTKDIYYISQSGLIGR 125 Query: 131 NNIE--------LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 N I+ + + + L G+ T I L + N + + + +L Sbjct: 126 NGIDSSTKGRAHFSSQSQAYTLADGQ---DTLEIPLTYVADNGVTYTKVFTLHRGKFDVG 182 Query: 183 VD-TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 V+ + N S +Q++ G+I +H + + ++ + A +KYS E + Sbjct: 183 VEYRINNTSAEQLQVQMYGQI-KHSIKKSESSMMMPTYRGAAFSTADTRYEKYS-FEDMA 240 Query: 242 ISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 N + W + Y+ S ++P ++ F +S G F + PG Sbjct: 241 DKNLDKKTLGGWAAMLQHYFVSAWVPPANDQ-NTIFSSVSAG-GLANIGFRGAVYDVAPG 298 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 T + + G K+ + + L +++D+G+ +++A P+ L+ ++ + VGN Sbjct: 299 TQQTISAQFYVGPKDQEALSAISESL-----NLVVDYGFLWWLAIPIHWLLMFYQSFVGN 353 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G+AI+L T+ V+ + +PL K QY S A M+N+QPK+ +++E+F Q + +AM++LY Sbjct: 354 WGVAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLQDMKERFGDDR-QKMGQAMMELY 412 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP + Sbjct: 413 KKEKVNPMGGCLPILLQMPIFIALYWVLLESYELRHAPFMLWITDLSVQDPYYVL----- 467 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAG 537 P++M +SMF+ KM P P D Q ++ WMPV+F FPAG Sbjct: 468 --------------PLLMGVSMFLMQKMQPMAPTMDPMQQKMMQWMPVIFTVFFLWFPAG 513 Query: 538 LIIYWSWSNVISIVQQAVI 556 L++YW N+++I QQ +I Sbjct: 514 LVLYWLVGNLVAITQQKII 532 >gi|213650173|ref|ZP_03380226.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 484 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 109/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 163 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGT--NNFYTANLGNGIV 220 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G P I +A P ++ +D+GW +FI++P Sbjct: 221 AIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 275 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 276 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 335 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 336 D-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 394 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 395 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 435 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 436 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 469 >gi|269962686|ref|ZP_06177031.1| inner membrane protein, 60 kDa [Vibrio harveyi 1DA3] gi|269832609|gb|EEZ86723.1| inner membrane protein, 60 kDa [Vibrio harveyi 1DA3] Length = 540 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 155/535 (28%), Positives = 250/535 (46%), Gaps = 53/535 (9%) Query: 41 QTVKQPNQVDNSYAAVLIDDR----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 Q V+Q A DD Q + + + + L SI+ G +L Sbjct: 32 QAVEQAQSSSTLPAPSFADDLDPVPGQQQASAKTITVTTDVLTLSIDTVGGDVVHADLNK 91 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT----- 151 Y ++ S+ P V L +TK F + I+L ++N +S T Sbjct: 92 YAAELDSSDPFVLL---KDTKGHQFIAQSGLVGPQGIDLSSTNRPHYNVSADSFTLADGQ 148 Query: 152 PTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210 + + F AN I + +T Y + V NNS + F +R A Sbjct: 149 DELRVPMTF-TANGIEYIKTYVFKRGSYALNVEYDVVNNSGNNATFGMYAH-LRQNLMDA 206 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYS--DIEKSSIS-NFHESNSWLGISDKYWASVFIPSK 267 + + + + +KYS D++ ++S N + W + Y+A+ +IP Sbjct: 207 GGSITMPTYRGGAYSTEDVRYKKYSFEDMQDRNLSINLADGQGWAAMIQHYFAAAWIPRN 266 Query: 268 E--TSFHSQ-FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 E T+ +++ L D R K TI G L+ G K E Sbjct: 267 EPGTNLYTRVIGNLGDIGVRMPNK------TIATGDQAKFEATLWVGPK-----LQNEMA 315 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 P ++++D+GW +FIAKP+ L+++ + VGN+G+AI+ T V+ +PL K QY Sbjct: 316 AVAPNLDLVVDYGWLWFIAKPLHSLLAFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYT 375 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A M+ +QPK+ +RE+ Q + + M++LYK +NPL GC P++LQ+P+F A+Y Sbjct: 376 SMAKMRMLQPKLQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALY 434 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + S+E+RH+PF+GWI DL+A D P+Y I P++M SMF+ Sbjct: 435 WALMESVELRHSPFFGWIHDLSAQD-----------PYY--------ILPLLMGASMFLI 475 Query: 505 MKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 KMSP D Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 476 QKMSPTTVTDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYK 530 >gi|322506198|gb|ADX01652.1| YidC [Acinetobacter baumannii 1656-2] Length = 574 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 154/525 (29%), Positives = 250/525 (47%), Gaps = 68/525 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD---------------- 125 IN KG + L + SN P V L ++ K Y A+ Sbjct: 84 INPKGGDIVRIELLSHDKSKDSNQPFVML--ENDAKRTYVAQSGLIGLNGPDSSRGGRPL 141 Query: 126 YVSTANNIELPNSNTVWNLI--SGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKI 182 Y + L ++ V + S K+LT + +VFK + +T + + Y + Sbjct: 142 YAVEKTSYTLADAKGVQDQSGHSEKVLT----VPMVFKTPEGVEIIKTFTFTQGQYPIVV 197 Query: 183 VDTVTNNSIDQIRFSPRGRIMRH------KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 V N S + G++ R K T G G D + K+++ Sbjct: 198 KHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFLGGAWGTPDAHYNKLKFAN 257 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPS--KETSFHSQFKYLSDGHARYQAK------ 288 + + N W+ + Y+ S +IP K T + Q Y++ +R A Sbjct: 258 FSEEKL-NTEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQ-PYVAKLESRQSADHMNIIG 315 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F++ I + G S+ L++G P + KDLA+ +D+GW + IAK +F+ Sbjct: 316 FTSPVINVPAGTSMEVDAKLYSG----PKVQSELKDLAV-GLNQTVDYGWLWPIAKLLFL 370 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ I P++ ++E+F + Sbjct: 371 GLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRVIAPEMQRMKEEFGEDRM 430 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + Q+ M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+RHAP+ GWI+DL+A Sbjct: 431 RFSQE-MMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELRHAPWLGWIQDLSAM 489 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P+IM +MF Q ++P PAD QA + MP++F Sbjct: 490 DPWFIL-------------------PLIMGATMFAQQMLNPQPADPMQAKVFRIMPIMFT 530 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + FPAGL++YW +N I+I+QQ I K E I + ST Sbjct: 531 VFMLFFPAGLVLYWIVNNSITILQQWFINK--SVEKSRISKAEST 573 >gi|198243281|ref|YP_002217791.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|254773020|sp|B5FN13|OXAA_SALDC RecName: Full=Inner membrane protein oxaA gi|197937797|gb|ACH75130.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 548 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 109/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGT--NNFYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G P I +A P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 D-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|169634939|ref|YP_001708675.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii SDF] gi|184156329|ref|YP_001844668.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii ACICU] gi|260558089|ref|ZP_05830300.1| membrane protein insertase, YidC/Oxa1 family domain [Acinetobacter baumannii ATCC 19606] gi|332873303|ref|ZP_08441258.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6014059] gi|169153731|emb|CAP02932.1| Inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase [Acinetobacter baumannii] gi|183207923|gb|ACC55321.1| Preprotein translocase subunit YidC [Acinetobacter baumannii ACICU] gi|260408443|gb|EEX01750.1| membrane protein insertase, YidC/Oxa1 family domain [Acinetobacter baumannii ATCC 19606] gi|332738509|gb|EGJ69381.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6014059] Length = 586 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 150/510 (29%), Positives = 245/510 (48%), Gaps = 66/510 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD---------------- 125 IN KG + L + SN P V L ++ K Y A+ Sbjct: 96 INPKGGDIVRIELLSHDKSKDSNQPFVML--ENDAKRTYVAQSGLIGLNGPDSSRGGRPL 153 Query: 126 YVSTANNIELPNSNTVWNLI--SGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKI 182 Y + L ++ V + S K+LT + +VFK + +T + + Y + Sbjct: 154 YAVEKTSYTLADAKGVQDQSGHSEKVLT----VPMVFKTPEGVEIIKTFTFTQGQYPIVV 209 Query: 183 VDTVTNNSIDQIRFSPRGRIMRH------KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 V N S + G++ R K T G G D + K+++ Sbjct: 210 KHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFLGGAWGTPDAHYNKLKFAN 269 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPS--KETSFHSQFKYLSDGHARYQAK------ 288 + + N W+ + Y+ S +IP K T + Q Y++ +R A Sbjct: 270 FSEEKL-NTEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQ-PYVAKLESRQSADHMNIIG 327 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F++ I + G S+ L++G P + KDLA+ +D+GW + IAK +F+ Sbjct: 328 FTSPVINVPAGTSMEVDAKLYSG----PKVQSELKDLAV-GLNQTVDYGWLWPIAKLLFL 382 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ I P++ ++E+F + Sbjct: 383 GLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRVIAPEMQRMKEEFGEDRM 442 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + Q+ M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+RHAP+ GWI+DL+A Sbjct: 443 RFSQE-MMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELRHAPWLGWIQDLSAM 501 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P+IM +MF Q ++P PAD QA + MP++F Sbjct: 502 DPWFIL-------------------PLIMGATMFAQQMLNPQPADPMQAKVFRIMPIMFT 542 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FPAGL++YW +N I+I+QQ I K Sbjct: 543 VFMLFFPAGLVLYWIVNNSITILQQWFINK 572 >gi|238787832|ref|ZP_04631629.1| Inner membrane protein oxaA [Yersinia frederiksenii ATCC 33641] gi|238724175|gb|EEQ15818.1| Inner membrane protein oxaA [Yersinia frederiksenii ATCC 33641] Length = 531 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 151/522 (28%), Positives = 254/522 (48%), Gaps = 57/522 (10%) Query: 59 DDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPS 114 D +QA+ S + +L K L +IN +G + NL Y + S+ L +P+ Sbjct: 29 DKASQAVPGSGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELLETTPA 88 Query: 115 NTKNAYFAELDYVSTANN--------IELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 A + L S +N E+P ++ + L G+ I L F + Sbjct: 89 FIYQAQ-SGLTGKSGPDNPANGERPLFEVPQTSFI--LADGQ---DELRIPLTFTGKDGS 142 Query: 167 LFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGVQEG 219 +F +T L + Y + V N S + + G++ +H+ T +N F + Sbjct: 143 VFTKTFLLKRNDYAIGVDYHVKNASEAPLELTLFGQLKQSINLPKHR-DTGSNNFALHTY 201 Query: 220 FIAVLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 A +KYS DIE S+ W+ + +Y+A+ +IP+ + + F Sbjct: 202 RGAAYSSDETKYKKYSFSDIEDKSL-EITTKGGWVAMLQQYFATAWIPTANET--NTFYS 258 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 G+ F + I PG+ L+ G P I +A P ++ +D+G Sbjct: 259 ADLGNGLAAIGFKGTPVVIQPGEQKQLGATLWVG----PEIQDKMAAIA-PHLDLTVDYG 313 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ Sbjct: 314 WLWFISQPLFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLA 373 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAP Sbjct: 374 AMRERIGDD-KQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAP 432 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQ 516 F WI DL+A D P+Y I PI+M ++M+ KMSP D Q Sbjct: 433 FILWIHDLSAQD-----------PYY--------ILPILMGITMYFIQKMSPTTVTDPMQ 473 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ +MPV+F FPAGL++Y+ SN+++I+QQ +I + Sbjct: 474 QKIMTFMPVIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 515 >gi|168235484|ref|ZP_02660542.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734490|ref|YP_002116785.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|204928556|ref|ZP_03219755.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|254778160|sp|B4TN10|OXAA_SALSV RecName: Full=Inner membrane protein oxaA gi|194709992|gb|ACF89213.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291370|gb|EDY30722.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204321989|gb|EDZ07187.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|320088263|emb|CBY98025.1| Inner membrane protein oxaA [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322617246|gb|EFY14151.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619066|gb|EFY15952.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625133|gb|EFY21961.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630184|gb|EFY26955.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634390|gb|EFY31124.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635275|gb|EFY31990.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642901|gb|EFY39485.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647619|gb|EFY44106.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650575|gb|EFY46982.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656399|gb|EFY52691.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661579|gb|EFY57802.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661660|gb|EFY57879.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668226|gb|EFY64384.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672845|gb|EFY68953.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322674974|gb|EFY71060.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683664|gb|EFY79677.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687740|gb|EFY83709.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192045|gb|EFZ77280.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200527|gb|EFZ85605.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204953|gb|EFZ89938.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206696|gb|EFZ91653.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211768|gb|EFZ96601.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218630|gb|EGA03337.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220031|gb|EGA04501.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224801|gb|EGA09066.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232490|gb|EGA16592.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235265|gb|EGA19350.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241053|gb|EGA25090.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241397|gb|EGA25429.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248628|gb|EGA32558.1| membrane protein insertase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252073|gb|EGA35933.1| membrane protein insertase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258623|gb|EGA42286.1| membrane protein insertase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262346|gb|EGA45904.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268182|gb|EGA51658.1| membrane protein insertase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270596|gb|EGA54041.1| membrane protein insertase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 548 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 109/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGT--NNFYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G P I +A P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 D-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|62182329|ref|YP_218746.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75505468|sp|Q57HZ7|OXAA_SALCH RecName: Full=Inner membrane protein oxaA gi|62129962|gb|AAX67665.1| putative Preprotein translocase subunit YidC [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 548 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 109/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGT--NNFYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G P I +A P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTSAMTSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 D-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|322716820|gb|EFZ08391.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 548 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 109/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGT--NNFYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G P I +A P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTSAMTSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 D-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|168242063|ref|ZP_02666995.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448004|ref|YP_002047874.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|254773052|sp|B4TAV2|OXAA_SALHS RecName: Full=Inner membrane protein oxaA gi|194406308|gb|ACF66527.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205338842|gb|EDZ25606.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 548 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 109/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGT--NNFYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G P I +A P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 D-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|293391845|ref|ZP_06636179.1| putative inner membrane protein translocase component YidC [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952379|gb|EFE02498.1| putative inner membrane protein translocase component YidC [Aggregatibacter actinomycetemcomitans D7S-1] Length = 536 Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 161/567 (28%), Positives = 273/567 (48%), Gaps = 72/567 (12%) Query: 13 LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVE 72 +S I+ WQ Y P+ + V + V N A + D +A+ + Sbjct: 8 MSFIVYQQWQLDYHTPKPVTTEQTAASASDVPASSNVGN--AVIATDTQAKG----KIIT 61 Query: 73 LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-------------LSPSNTKNA 119 L+N IN G L Y ++ SN+P + L L N + Sbjct: 62 LENDVFRLKINTLGGDVVSSELLKYDAELDSNTPFMLLQNTPQHVYIAQSGLIGKNGIDT 121 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HY 178 DY + +N +L + ++ P +K + + + + +L Y Sbjct: 122 KSGRADYQADGDNFKLADGQN-------ELSVPLVYVK------DGVTYRKVFTLKRGEY 168 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDI 237 + + N S I P G++ +++ N G + + + +SD+ Sbjct: 169 NIAVNYEINNQSDKTIEVEPYGQLRHTLVESSGNVAMPTYTGGAYSSSETNYKKYSFSDM 228 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD-----GHARYQAKFSAN 292 E +++S + W+ + Y+ S +IP+++ +Q L D G Y+ + Sbjct: 229 ENANLS-INTKAGWVAVLQHYFVSAWIPNQDAD--NQLYTLIDKANNIGSIGYRGPVT-- 283 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 +I P + T T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ Sbjct: 284 --SIQPNTTETLTSKLWTG----PKLQNEMAQVA-NHLDLTVDYGWAWFIAKPLFRLLTF 336 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 LV N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F + Q + Sbjct: 337 IQKLVHNWGVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERFGED-RQRMS 395 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC P+LLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D Sbjct: 396 QEMMKLYKDEKVNPLGGCLPLLLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD--- 452 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 P+Y I PI+M SMF+ KMSP P AD Q ++ +MP++F+ Sbjct: 453 --------PYY--------ILPILMGGSMFLLQKMSPTPVADPIQQKVMTFMPLIFMVFF 496 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW SN+I+I+QQ +I + Sbjct: 497 LWFPAGLVLYWLVSNLITIIQQQLIYR 523 >gi|229520178|ref|ZP_04409605.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TM 11079-80] gi|229342772|gb|EEO07763.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TM 11079-80] Length = 482 Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 129/404 (31%), Positives = 203/404 (50%), Gaps = 38/404 (9%) Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 AN I + +T L Y +V V NNS + + ++ + N G Sbjct: 100 QANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRG 159 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETS---FHSQF 275 D + + D++ ++S ++ + +W+ + Y+AS +IP E + Sbjct: 160 GAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVI 219 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 L D R K AN G L+ G K + P ++++D Sbjct: 220 NNLGDMGIRTPNKTIAN------GDKAEFEATLWVGPK-----LQDQMAATAPNLDLVVD 268 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +FIAKP+ L+S + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK Sbjct: 269 YGWLWFIAKPLHWLLSVIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPK 328 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + +RE+ Q + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH Sbjct: 329 LQAMRERIGDDR-QRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRH 387 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 +PF+GWI DL+A D P+Y I P++M SMF+ KMSP D Sbjct: 388 SPFFGWIHDLSAQD-----------PYY--------ILPLLMGASMFVIQKMSPTTITDP 428 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 429 MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 472 >gi|194446373|ref|YP_002043091.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|254778157|sp|B4SYB1|OXAA_SALNS RecName: Full=Inner membrane protein oxaA gi|194405036|gb|ACF65258.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 548 Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 109/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGT--NNFYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G P I +A P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 D-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|327482918|gb|AEA77325.1| Inner membrane protein translocase component YidC, long form [Vibrio cholerae LMA3894-4] Length = 541 Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 129/404 (31%), Positives = 202/404 (50%), Gaps = 38/404 (9%) Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 AN I + +T L Y +V V NNS + + ++ + N G Sbjct: 159 QANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRG 218 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETS---FHSQF 275 D + + D++ ++S ++ + +W+ + Y+AS +IP E + Sbjct: 219 GAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVI 278 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 L D R K TI G L+ G K + P ++++D Sbjct: 279 NNLGDMGIRTPNK------TITNGDKAEFEATLWVGPK-----LQDQMAATAPNLDLVVD 327 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +FIAKP+ L+S VGN+G+AI+ T V+ +PL K QY S A M+ +QPK Sbjct: 328 YGWLWFIAKPLHWLLSVIQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPK 387 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + +RE+ Q + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH Sbjct: 388 LQAMRERIGDDR-QRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRH 446 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 +PF+GWI DL+A D P+Y I P++M SMF+ KMSP D Sbjct: 447 SPFFGWIHDLSAQD-----------PYY--------ILPLLMGASMFVIQKMSPTTITDP 487 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 488 MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531 >gi|229530208|ref|ZP_04419597.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 12129(1)] gi|229332341|gb|EEN97828.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 12129(1)] Length = 541 Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 129/404 (31%), Positives = 203/404 (50%), Gaps = 38/404 (9%) Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 AN I + +T L Y +V V NNS + + ++ + N G Sbjct: 159 QANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRG 218 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETS---FHSQF 275 D + + D++ ++S ++ + +W+ + Y+AS +IP E + Sbjct: 219 GAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVI 278 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 L D R K AN G L+ G K + P ++++D Sbjct: 279 NNLGDMGIRTPNKTIAN------GDKAEFEATLWVGPK-----LQDQMAATAPNLDLVVD 327 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +FIAKP+ L+S + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK Sbjct: 328 YGWLWFIAKPLHWLLSVIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPK 387 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + +RE+ Q + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH Sbjct: 388 LQAMRERIGDDR-QRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRH 446 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 +PF+GWI DL+A D P+Y I P++M SMF+ KMSP D Sbjct: 447 SPFFGWIHDLSAQD-----------PYY--------ILPLLMGASMFVIQKMSPTTITDP 487 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 488 MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531 >gi|161505628|ref|YP_001572740.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189036359|sp|A9MJT7|OXAA_SALAR RecName: Full=Inner membrane protein oxaA gi|160866975|gb|ABX23598.1| hypothetical protein SARI_03804 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 548 Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 109/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGT--NNFYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G P I +A P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 D-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|297570495|ref|YP_003691839.1| membrane protein insertase, YidC/Oxa1 family [Desulfurivibrio alkaliphilus AHT2] gi|296926410|gb|ADH87220.1| membrane protein insertase, YidC/Oxa1 family [Desulfurivibrio alkaliphilus AHT2] Length = 560 Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 139/398 (34%), Positives = 218/398 (54%), Gaps = 27/398 (6%) Query: 168 FERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI----A 222 F RT + D YL + V N ++ +P ++ ++P AT E F+ A Sbjct: 180 FIRTYTFRDGDYLIDVAVEVVNRGEVPLQGAPYLTLV-NRPFVATGD--PLEHFLFTGPA 236 Query: 223 VLGDKSLVEQKYSDIE-KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 L D + + K D+ + + +F W G D Y+ + IP + F D Sbjct: 237 ALVDNEVQQVKVKDLAGERAGRSFTGRVRWAGYHDSYFLTSIIPLATDQATAHFSSRRD- 295 Query: 282 HARYQAKFSANEITILPGKSITTTNFL-FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 A+ I+P +++ + G K+ ++ DLA +++GWF Sbjct: 296 --ELVTTVLASAADIIPAGGAHRYDYMVYFGPKKLTLLNELGHDLA-----RAVNFGWFD 348 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+A+P F L+ + Y LVGN+G+AI+L T+ +K F+PL +K S M+ IQPK+ +LR Sbjct: 349 FLARPTFYLLHFLYGLVGNYGVAIILVTIIIKAAFWPLTQKGLKSMKVMQKIQPKMTKLR 408 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K Q Q+ M++LY+T+ +NPL GC P+LLQIPVFFA+YKV+ S+E+RHAPF Sbjct: 409 EKYKDDR-QRQQQEMLKLYQTYKVNPLGGCLPMLLQIPVFFALYKVLLQSIELRHAPFML 467 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+A D I F +P + + ++M+LSMF+Q KM+ P +D QA I+ Sbjct: 468 WINDLSAPDRLYI-------GFDIPWLGGIPVLTLLMALSMFVQQKMT-PISDPMQARIM 519 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++PVVF F +F +GL++YW +NV++I QQ +I + Sbjct: 520 LFLPVVFFFLFLNFASGLVLYWFINNVLTIAQQYMIYR 557 >gi|167995355|ref|ZP_02576445.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205326982|gb|EDZ13746.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|332990692|gb|AEF09675.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 548 Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 109/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGT--NNFYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G P I +A P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 D-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|16767127|ref|NP_462742.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167548869|ref|ZP_02342628.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168260373|ref|ZP_02682346.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|197265232|ref|ZP_03165306.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200387745|ref|ZP_03214357.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|38503121|sp|Q8ZKY4|OXAA_SALTY RecName: Full=Inner membrane protein oxaA gi|16422416|gb|AAL22701.1| putative preprotein translocase subunit YidC [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197243487|gb|EDY26107.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199604843|gb|EDZ03388.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205325671|gb|EDZ13510.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205350262|gb|EDZ36893.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261248983|emb|CBG26840.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996129|gb|ACY91014.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160375|emb|CBW19900.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914971|dbj|BAJ38945.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225560|gb|EFX50615.1| Inner membrane protein translocase component YidC, long form [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132203|gb|ADX19633.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 548 Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 109/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGT--NNFYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G P I +A P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 D-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|160872739|ref|ZP_02062871.1| inner membrane protein OxaA [Rickettsiella grylli] gi|159121538|gb|EDP46876.1| inner membrane protein OxaA [Rickettsiella grylli] Length = 538 Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 126/414 (30%), Positives = 213/414 (51%), Gaps = 34/414 (8%) Query: 156 IKLVFKNANNILFERTISLDEH-YLFKIVDTVTN--NSIDQIRFSPRGRIMRHKPQTATN 212 + LV I ++ + + YL + ++N SI + RF + + K A + Sbjct: 151 VSLVCNTCGKIKVQKQFTFKRNDYLIPVRYQISNVAPSIFEGRF--YVQFQQRKIDKAHS 208 Query: 213 TFGVQEGFIAVLGDKSLVEQKYS-DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 F + + ++ QK S D K + + W+ + Y+ S +IP F Sbjct: 209 LFNISSYTGGAISTQNKPYQKISFDKMKQGTLSLATQDGWVAMLQHYFLSAWIPPAGQEF 268 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 H + Y D Y I PG + + L+ G + + K +A P + Sbjct: 269 HF-YSYAKDD--IYTLGMLGAPFQIQPGMEFVSESKLYLGPESMDRL----KAVA-PHLD 320 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + +D+G +FI+ +F L+ + ++ VGN+G +I++ TV +KL F+ L+ K Y S A+M++ Sbjct: 321 LTVDYGILWFISMALFSLLKFIHHYVGNWGWSIVIVTVLIKLAFYHLSAKSYRSMASMRS 380 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ LRE++ Q L +A + LYKT +NPL GC PIL+QIPVF A+Y ++ S+ Sbjct: 381 LQPRLQALRERYGDDK-QKLTQATMALYKTEKVNPLGGCLPILVQIPVFIALYWMLLESV 439 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+R APF WI DL+A DP I P++M ++MF+Q +++PPP Sbjct: 440 ELRQAPFILWIHDLSAKDPYYIL-------------------PVLMGITMFVQQRLNPPP 480 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 D QA ++ ++P+ F +FP+GL++YW +N +SI+QQ IM+ E+ Sbjct: 481 PDPTQAKVMQFLPIFFTALFLNFPSGLVLYWIVNNTLSILQQWFIMRRLSVELS 534 >gi|238753999|ref|ZP_04615358.1| hypothetical protein yruck0001_29200 [Yersinia ruckeri ATCC 29473] gi|238707751|gb|EEQ00110.1| hypothetical protein yruck0001_29200 [Yersinia ruckeri ATCC 29473] Length = 529 Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 127/413 (30%), Positives = 212/413 (51%), Gaps = 39/413 (9%) Query: 156 IKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQ 208 I L F + +F +T + + Y + V N S + + G++ +H+ Sbjct: 132 IPLTFTAKDGSVFTKTFIVKRNDYAIGVDYQVKNASAAPLELTLFGQLKQSINLPKHR-D 190 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPS 266 T +N F + A QKY+ IEK+ + N W+ + +Y+A+ +IP Sbjct: 191 TGSNNFALHTYRGAAYSSDEDNYQKYAFDKIEKNPL-NITTKGGWVAMLQQYFATAWIP- 248 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 E + + F G+ F + + PG+ L+ G P I +A Sbjct: 249 -EANETNTFYSADLGNGLAAIGFKGTPVVVQPGEQKQLAATLWVG----PEIQDKMAAIA 303 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + + VGN+G +I++ T V+ + +PL K QY S Sbjct: 304 -PHLDLTVDYGWLWFISQPLFKLLKFIHGFVGNWGFSIIVITFIVRGIMYPLTKAQYTSM 362 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPK+ +RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y + Sbjct: 363 AKMRMLQPKLAAMRERIGDD-KQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYM 421 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + S+E+RHAPF WI DL+A D P+Y I PI+M ++MF K Sbjct: 422 LMSSVELRHAPFILWIHDLSAQD-----------PYY--------ILPILMGITMFFIQK 462 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MSP D Q I+ +MPV+F FPAGL++Y+ SN+++I+QQ +I + Sbjct: 463 MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 515 >gi|15640036|ref|NP_062588.1| putative inner membrane protein translocase component YidC [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591471|ref|ZP_01678744.1| inner membrane protein, 60 kDa [Vibrio cholerae 2740-80] gi|147674272|ref|YP_001218407.1| putative inner membrane protein translocase component YidC [Vibrio cholerae O395] gi|153212974|ref|ZP_01948568.1| inner membrane protein, 60 kDa [Vibrio cholerae 1587] gi|153821953|ref|ZP_01974620.1| inner membrane protein, 60 kDa [Vibrio cholerae B33] gi|227080241|ref|YP_002808792.1| putative Inner membrane protein [Vibrio cholerae M66-2] gi|229508291|ref|ZP_04397795.1| OxaI/YidC membrane insertion protein [Vibrio cholerae BX 330286] gi|229508870|ref|ZP_04398361.1| OxaI/YidC membrane insertion protein [Vibrio cholerae B33] gi|229606565|ref|YP_002877213.1| inner membrane protein translocase component YidC [Vibrio cholerae MJ-1236] gi|254851570|ref|ZP_05240920.1| inner membrane protein oxaA [Vibrio cholerae MO10] gi|255746812|ref|ZP_05420758.1| OxaI/YidC membrane insertion protein [Vibrio cholera CIRS 101] gi|262155892|ref|ZP_06029014.1| OxaI/YidC membrane insertion protein [Vibrio cholerae INDRE 91/1] gi|262167094|ref|ZP_06034809.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC27] gi|298501190|ref|ZP_07010989.1| inner membrane protein [Vibrio cholerae MAK 757] gi|38503195|sp|Q9KVY4|OXAA_VIBCH RecName: Full=Inner membrane protein oxaA gi|172047497|sp|A5F484|OXAA_VIBC3 RecName: Full=Inner membrane protein oxaA gi|254778170|sp|C3LP77|OXAA_VIBCM RecName: Full=Inner membrane protein oxaA gi|9654395|gb|AAF93182.1| inner membrane protein, 60 kDa [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546673|gb|EAX56855.1| inner membrane protein, 60 kDa [Vibrio cholerae 2740-80] gi|124116200|gb|EAY35020.1| inner membrane protein, 60 kDa [Vibrio cholerae 1587] gi|126520492|gb|EAZ77715.1| inner membrane protein, 60 kDa [Vibrio cholerae B33] gi|146316155|gb|ABQ20694.1| inner membrane protein, 60 kDa [Vibrio cholerae O395] gi|227008129|gb|ACP04341.1| putative Inner membrane protein [Vibrio cholerae M66-2] gi|227011993|gb|ACP08203.1| putative Inner membrane protein [Vibrio cholerae O395] gi|229354145|gb|EEO19077.1| OxaI/YidC membrane insertion protein [Vibrio cholerae B33] gi|229354564|gb|EEO19486.1| OxaI/YidC membrane insertion protein [Vibrio cholerae BX 330286] gi|229369220|gb|ACQ59643.1| OxaI/YidC membrane insertion protein [Vibrio cholerae MJ-1236] gi|254847275|gb|EET25689.1| inner membrane protein oxaA [Vibrio cholerae MO10] gi|255735569|gb|EET90968.1| OxaI/YidC membrane insertion protein [Vibrio cholera CIRS 101] gi|262024480|gb|EEY43166.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC27] gi|262030344|gb|EEY48986.1| OxaI/YidC membrane insertion protein [Vibrio cholerae INDRE 91/1] gi|297540062|gb|EFH76124.1| inner membrane protein [Vibrio cholerae MAK 757] Length = 541 Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 129/404 (31%), Positives = 202/404 (50%), Gaps = 38/404 (9%) Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 AN I + +T L Y +V V NNS + + ++ + N G Sbjct: 159 QANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRG 218 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETS---FHSQF 275 D + + D++ ++S ++ + +W+ + Y+AS +IP E + Sbjct: 219 GAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVI 278 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 L D R K AN G L+ G K + P ++++D Sbjct: 279 NNLGDMGIRTPNKTIAN------GDKAEFEATLWVGPK-----LQDQMAATAPNLDLVVD 327 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +FIAKP+ L+S VGN+G+AI+ T V+ +PL K QY S A M+ +QPK Sbjct: 328 YGWLWFIAKPLHWLLSVIQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPK 387 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + +RE+ Q + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH Sbjct: 388 LQAMRERIGDDR-QRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRH 446 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 +PF+GWI DL+A D P+Y I P++M SMF+ KMSP D Sbjct: 447 SPFFGWIHDLSAQD-----------PYY--------ILPLLMGASMFVIQKMSPTTITDP 487 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 488 MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531 >gi|293393717|ref|ZP_06638025.1| YidC/Oxa1 family membrane protein insertase [Serratia odorifera DSM 4582] gi|291423761|gb|EFE96982.1| YidC/Oxa1 family membrane protein insertase [Serratia odorifera DSM 4582] Length = 544 Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 119/403 (29%), Positives = 206/403 (51%), Gaps = 37/403 (9%) Query: 164 NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGV 216 + + + +T L HY + +V N + S G++ +H+ T +N F + Sbjct: 156 DGVEYTKTFVLKRNHYAVGVDYSVNNKGTTPLELSLFGQLKQTTELPKHR-DTGSNNFAL 214 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 A +KY+ +K N W+ + +Y+A+ ++P+ + + + F Sbjct: 215 HTFRGAAYSTSETKYEKYA-FDKDENLNVSTQGGWVAMLQQYFATAWVPATQGT--NTFY 271 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 G F A + + PG L+ G P + LA P ++ +D+ Sbjct: 272 TAKPGDNLSTIGFKATPVVVQPGAQQQLNATLWVG----PELQDQMAQLA-PHLDLTVDY 326 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW +FI++P+F L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ Sbjct: 327 GWLWFISQPLFKLLKFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKL 386 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHA Sbjct: 387 QAMRERIGDD-KQRMSQEMMALYKAEKVNPLGGCLPLIIQMPIFLALYYMLMGSVELRHA 445 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKG 515 PF WI DL+A D P+Y I PI+M ++MF KMSP D Sbjct: 446 PFALWIHDLSAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPM 486 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 487 QQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 529 >gi|239906118|ref|YP_002952857.1| inner membrane protein OxaA [Desulfovibrio magneticus RS-1] gi|259515664|sp|C4XNJ6|OXAA_DESMR RecName: Full=Inner membrane protein oxaA gi|239795982|dbj|BAH74971.1| inner membrane protein OxaA [Desulfovibrio magneticus RS-1] Length = 532 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 157/571 (27%), Positives = 264/571 (46%), Gaps = 66/571 (11%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N +A+ALS+ ++ W NF P + + Q + AA A Sbjct: 2 ENKRVILAVALSLAVLVGW-NFLFPPAKQAPKPDAAVSQQDAPAQSSPAAPAAKAETLAA 60 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 A + R+ + P +N G + L+ Y + +SP+V L+ A Sbjct: 61 FAPTPGKRITIDTPLYTAVLNSTGGVLEQFALKNYRETIKPDSPLVNLIDDKAKAKAPLG 120 Query: 123 ----------ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 +D+ + +++L +++G++ +L F + I+ Sbjct: 121 IILNGSPTWQNVDWSAEGGDLKLEAGAAGTVVLAGRMGDVVVKRELTFSGDSYII----- 175 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQEGFIAVLGDKSLVE 231 DE + +++NN +R + + A +++ Q F G ++ Sbjct: 176 --DEKF------SLSNNGGAPLRNRLSLTVAVDRLSAADDSYNPTQAAFYGASG----LD 223 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D + + + W + Y+ +P + + K L DG R Sbjct: 224 LESGDKKLAEGVAPEKPMEWGAVMSNYFLVGIVP-EAADLRGKAK-LEDGVFRVALDKDG 281 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 E+ ++ FL P + Y ++A + ID+GWF F+AKP+ L+ Sbjct: 282 LEVPAGGRSDLSIAYFLG------PKVPKY-LEMAPHKLVASIDYGWFDFVAKPLIKLLH 334 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 +FY+ VGN+G+AI+L T+ +KL+F+PL++K Y S MK +QP + +LREK+K Q + Sbjct: 335 FFYDYVGNYGVAIILLTILIKLIFWPLSQKSYKSMDQMKKLQPLLTQLREKYKDD-RQKM 393 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIK 463 + M+QLYKT+ +NP GC P+++QIPVFF +Y+ + S+E+RHA F W+ Sbjct: 394 NEEMMQLYKTYKVNPAGGCLPMIVQIPVFFGLYQALLHSIELRHASFITHLPFTNMIWLA 453 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+A D PFY I P+IM +MF+Q KM+P P D QA ++ +M Sbjct: 454 DLSAKD-----------PFY--------ITPLIMGATMFLQQKMTPAPGDPTQAKVMLFM 494 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 PV+F F +FP+GL++YW +NVISI QQ Sbjct: 495 PVIFTFMFLNFPSGLVVYWLVNNVISIAQQG 525 >gi|323496920|ref|ZP_08101948.1| membrane protein insertase [Vibrio sinaloensis DSM 21326] gi|323317994|gb|EGA70977.1| membrane protein insertase [Vibrio sinaloensis DSM 21326] Length = 539 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 121/334 (36%), Positives = 188/334 (56%), Gaps = 38/334 (11%) Query: 232 QKYS--DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKE--TSFHSQ-FKYLSDGHARY 285 +KYS D++ ++S N + W + Y+AS +IP E T+ +++ L D R Sbjct: 227 KKYSFEDMQDRNLSINLPDGQGWAAMIQHYFASAWIPRNEPGTNLYTRVIGNLGDIGVRM 286 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 K TI G S + L+ G P + ++A P ++++D+GW +FIAKP Sbjct: 287 PNK------TIASGDSAQMSATLWVG----PKLQDQMAEVA-PNLDLVVDYGWLWFIAKP 335 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + L+S LV N+GIAI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Sbjct: 336 LHSLLSLIQGLVSNWGIAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD 395 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL Sbjct: 396 DR-QRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDL 454 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I P++M SMF+ KMSP D Q I+ +MP Sbjct: 455 SAQD-----------PYY--------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMP 495 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F F FP+GL++YW SN+++++QQ +I K Sbjct: 496 VMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYK 529 >gi|303325515|ref|ZP_07355958.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp. 3_1_syn3] gi|302863431|gb|EFL86362.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp. 3_1_syn3] Length = 551 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 165/589 (28%), Positives = 274/589 (46%), Gaps = 71/589 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY--------PRIEEMNNERKNIQTVKQPNQVDNS 52 M+ + N +AI L ++I++ W Y P E + VK + + + Sbjct: 1 MQDSKNLILAIVLCLVILFGWGRLAEYMGWVQTPDPAAVAQQQEAVRQEAVKAEQRKEEA 60 Query: 53 YAAVLIDDRAQALSMSPRVEL--KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 A + A + +P +L +P G L+ + ++ +SP+V + Sbjct: 61 AKAATLP----AFTPAPGRDLTVDSPLYEAVFYTGGGPLRSFKLKKFQTGLAPDSPLVNM 116 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI-----LTPTTPIKLVFKNAN- 164 + + + A A L V N + S W+L SG+ ++LV N Sbjct: 117 V---DERTAAVAPLGLVI---NSQPSWSTGQWSLDSGEQNLKLDAGQQGALRLVGVVDNL 170 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRG-RIMRHKPQTATNTFGVQEGFIAV 223 ++ E T + D + + + + + N+ DQ PR R+ A+N G + + V Sbjct: 171 RVIRELTFNADSYLIKEKIRLI--NAGDQ----PRSVRVSYTVASDASNAAGGRYDSMRV 224 Query: 224 L--GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 D SL E+ S +S+ W G Y+ S +P ET+ + L Sbjct: 225 AWDNDGSLSEESSSKTLESTGVQATGKIYWAGAMSTYFLSAVLPG-ETNNVTVKGLLQ-- 281 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 Y+ E + PG+ T + G K+ + LA ID G F Sbjct: 282 KTVYRTAVEEPENLLAPGQEKELTVSYWLGPKDRTQLLAVSDQLAKS-----IDLGMFSI 336 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAK + L+ +F+ V N+G+AI+L T+ +K +F+PL K Y S MK +QP + +RE Sbjct: 337 IAKGLLWLLEFFHKYVHNWGVAIILLTIVIKAVFWPLTAKSYASMEKMKKLQPMMTAIRE 396 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG- 460 K+K + +++ K ++ LYKT+ +NP +GC PIL+Q+PVFF +Y+ + S+E+RHAPF Sbjct: 397 KYKDNK-ELMNKEVMALYKTYGVNPASGCVPILIQLPVFFGLYQALLTSIELRHAPFIMY 455 Query: 461 -------WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W+ DL+A DP +Y I P+IM L+MF+Q +MSPP D Sbjct: 456 LPFTDKLWLADLSAKDP-----------YY--------ITPVIMGLTMFLQQRMSPPATD 496 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 Q I+ ++P++F FP+GL+IYW +N++SI QQ ++M+ + A Sbjct: 497 PTQQKIMMFLPLIFTVLFLGFPSGLVIYWLVNNILSIFQQWLMMRKNKA 545 >gi|293611389|ref|ZP_06693685.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826261|gb|EFF84630.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 586 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 131/418 (31%), Positives = 216/418 (51%), Gaps = 42/418 (10%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH------KPQ 208 + +VFK + +T + + Y + V N S + G++ R K Sbjct: 182 VPMVFKTPEGVEIIKTFTFTQGQYPIVVKHQVINRSQQSWQGQMFGQLKRDNSEDPGKSS 241 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS-- 266 T G G D + K+++ + + N W+ I Y+ S +IP Sbjct: 242 QGIFTLGTFLGGAWGTPDAHYNKLKFANFSEEKV-NTEAKGGWVAIVQHYFVSAWIPGNL 300 Query: 267 KETSFHSQFKYLSDGHARYQAK------FSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 K T + Q Y++ +R A F++ I + G S+ L++G P + Sbjct: 301 KLTQANGQ-PYVAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSG----PKVQS 355 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 KDLA+ +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ Sbjct: 356 ELKDLAV-GLNQTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSS 414 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 K Y S A M+ I P++ ++E+F + + Q+ M+ LYK +NPL+GC P+LLQ+P+F Sbjct: 415 KSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQE-MMALYKREQVNPLSGCLPLLLQMPIF 473 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y V+ S+E+RHAP+ GWI+DL+A DP I P+IM + Sbjct: 474 LALYWVLMESVELRHAPWLGWIQDLSAMDPWFIL-------------------PLIMGAT 514 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MF Q ++P PAD QA + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 515 MFAQQMLNPQPADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINK 572 >gi|77461960|ref|YP_351467.1| putative inner membrane protein translocase component YidC [Pseudomonas fluorescens Pf0-1] gi|123602665|sp|Q3K428|OXAA_PSEPF RecName: Full=Inner membrane protein oxaA gi|77385963|gb|ABA77476.1| putative inner membrane protein [Pseudomonas fluorescens Pf0-1] Length = 560 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 113/323 (34%), Positives = 182/323 (56%), Gaps = 28/323 (8%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D++K+ + + W+ Y+ + ++ K + Q + D Y ++ +T Sbjct: 255 DMDKAQLKE-TVTGGWVAWLQHYFVTAWVAPKGENNIVQTR--KDSKGNYIIGYTGPSLT 311 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 PG + T+ L+AG K + K+L+ P E+ +D+G +FIA+P+F L+ + ++ Sbjct: 312 AAPGAKVETSAVLYAGPKSQAVL----KELS-PGLELTVDYGILWFIAQPIFWLLQHIHS 366 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +VGN+G +I+ T+ +K +FFPL+ Y S A M+ + PK+ L+E+ Q + +AM Sbjct: 367 IVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAALKEQHGDDR-QKMSQAM 425 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR APF WI DL+ D Sbjct: 426 MELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFMLWITDLSIKD------ 479 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 PF+ I PIIM +MFIQ +++P P D QA ++ MP++F F FP Sbjct: 480 -----PFF--------ILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFP 526 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N +SI QQ I + Sbjct: 527 AGLVLYWVVNNCLSIAQQWYITR 549 >gi|283836139|ref|ZP_06355880.1| hypothetical protein CIT292_10561 [Citrobacter youngae ATCC 29220] gi|291068329|gb|EFE06438.1| membrane protein insertase, YidC/Oxa1 family [Citrobacter youngae ATCC 29220] Length = 548 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 121/413 (29%), Positives = 218/413 (52%), Gaps = 38/413 (9%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQ 208 I + + +A F +T L Y + +V N + S G++ + H+ Sbjct: 149 IPMTYTDAAGNTFTKTFVLKRGEYAVNVNYSVQNAGEKPLEISTFGQLKQSINLPSHR-D 207 Query: 209 TATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 T ++ F + G D+ + K+ I ++ N + + W+ + +Y+A+ ++P Sbjct: 208 TGSSNFALHTFRGAAYSTPDEKYEKYKFDTIAENENLNVNAKDGWVAMLQQYFATAWVPR 267 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + + L +G A + + + + PG++ T+ L+ G P I +A Sbjct: 268 NDGTNNFYTANLGNGIAA--IGYKSQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA 321 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S Sbjct: 322 -PHLDLTVDYGWLWFISQPLFKLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSM 380 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F A+Y + Sbjct: 381 AKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYM 439 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + S+E+RHAPF WI DL+A D P+Y I PI+M ++MF K Sbjct: 440 LMGSIELRHAPFALWIHDLSAQD-----------PYY--------ILPILMGVTMFFIQK 480 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 481 MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|325123490|gb|ADY83013.1| putative inner membrane protein translocase component [Acinetobacter calcoaceticus PHEA-2] Length = 574 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 131/418 (31%), Positives = 216/418 (51%), Gaps = 42/418 (10%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH------KPQ 208 + +VFK + +T + + Y + V N S + G++ R K Sbjct: 170 VPMVFKTPEGVEIIKTFTFTQGQYPIVVKHQVINRSQQSWQGQMFGQLKRDNSEDPGKSS 229 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS-- 266 T G G D + K+++ + + N W+ I Y+ S +IP Sbjct: 230 QGIFTLGTFLGGAWGTPDAHYNKLKFANFSEEKV-NTEAKGGWVAIVQHYFVSAWIPGNL 288 Query: 267 KETSFHSQFKYLSDGHARYQAK------FSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 K T + Q Y++ +R A F++ I + G S+ L++G P + Sbjct: 289 KLTQANGQ-PYVAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSG----PKVQS 343 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 KDLA+ +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ Sbjct: 344 ELKDLAV-GLNQTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSS 402 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 K Y S A M+ I P++ ++E+F + + Q+ M+ LYK +NPL+GC P+LLQ+P+F Sbjct: 403 KSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQE-MMALYKREQVNPLSGCLPLLLQMPIF 461 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y V+ S+E+RHAP+ GWI+DL+A DP I P+IM + Sbjct: 462 LALYWVLMESVELRHAPWLGWIQDLSAMDPWFIL-------------------PLIMGAT 502 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MF Q ++P PAD QA + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 503 MFAQQMLNPQPADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINK 560 >gi|54299007|ref|YP_125376.1| hypothetical protein lpp3074 [Legionella pneumophila str. Paris] gi|81679354|sp|Q5X0M2|OXAA_LEGPA RecName: Full=Inner membrane protein oxaA gi|53752792|emb|CAH14227.1| hypothetical protein lpp3074 [Legionella pneumophila str. Paris] Length = 556 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 112/330 (33%), Positives = 188/330 (56%), Gaps = 29/330 (8%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 +SD+ KS++ + W+ + Y+ S ++P+ ++ ++F L+ Y + Sbjct: 245 FSDMSKSNL-DVDAKGGWIAMQQHYFLSAWVPNADS--ENKFYTLATDK-DYTIGAVSQP 300 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 IT+ P + + L+ G P I K ++ P ++ +D+G +F++ +F LM Sbjct: 301 ITVKPKEDKIVGSKLYIG----PEITSVLKGIS-PSLDLTVDYGILWFLSSLLFSLMKAI 355 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y +VGN+G +I+L TV +KL F+ L+ Y S A+M+ +QPK+ LRE++ ++ Q Sbjct: 356 YTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAKISQ- 414 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WI DLA+ADP ++ Sbjct: 415 ATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASADPYHV 474 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 P+IM +M IQ K++P PAD QA ++ ++P++F + Sbjct: 475 L-------------------PLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTGLFWN 515 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW +N +SI+QQ I + + E Sbjct: 516 FPSGLVLYWIVNNTLSILQQWYITRKYSDE 545 >gi|289209759|ref|YP_003461825.1| membrane protein insertase, YidC/Oxa1 family [Thioalkalivibrio sp. K90mix] gi|288945390|gb|ADC73089.1| membrane protein insertase, YidC/Oxa1 family [Thioalkalivibrio sp. K90mix] Length = 567 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 122/366 (33%), Positives = 193/366 (52%), Gaps = 29/366 (7%) Query: 201 RIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWA 260 R +RH P ++ + A D S +++ + I W+ + Y+ Sbjct: 221 RQLRHGPTPDRESWWLYTFTGAAYFDGSYQRERFESLADDPIQQ-RLHGGWVAMIQHYFV 279 Query: 261 SVFIPSKE--TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 S ++P + + +++ G SA +T+ PG+S L+ G K + Sbjct: 280 SAWVPGDDEVNALYARSVPGEVGEEYLIGLHSAEPLTVRPGESGQLQTRLWVGPKLQDEL 339 Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 + L E+ +D+G F F+AKP+F L+ +++VGN+G +I+L T+ +KL FF L Sbjct: 340 SQIAQGL-----ELTVDYGMFTFLAKPLFWLLDLIHSVVGNWGWSIVLLTILIKLAFFKL 394 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 + Y S A M+ + PK+ L+E++K Q + +A+++LYK INPL GC PIL+QIP Sbjct: 395 SATSYRSMARMRKVAPKLQALKERYKDDK-QRMNQALMELYKKEKINPLGGCLPILVQIP 453 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 VF A+Y V+ S+E+R AP+W WI+DL++ DP I PI+M Sbjct: 454 VFIALYWVLLESVELRQAPWWLWIQDLSSRDPYFIL-------------------PILMG 494 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM- 557 +SMF+Q K++PPP D Q I +P VF + FPAGL++YW +N+ SI QQ I Sbjct: 495 VSMFVQYKLNPPPMDPVQQKIFMALPFVFTIFFAFFPAGLVLYWFTNNLFSIAQQWYITR 554 Query: 558 KMHGAE 563 K+ G E Sbjct: 555 KIEGGE 560 >gi|326625577|gb|EGE31922.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 531 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 109/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 210 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGT--NNFYTANLGNGIV 267 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G P I +A P ++ +D+GW +FI++P Sbjct: 268 AIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 322 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 323 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 382 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 383 D-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 441 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 442 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 482 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 483 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 516 >gi|237729027|ref|ZP_04559508.1| inner membrane protein oxaA [Citrobacter sp. 30_2] gi|226909649|gb|EEH95567.1| inner membrane protein oxaA [Citrobacter sp. 30_2] Length = 548 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 121/413 (29%), Positives = 218/413 (52%), Gaps = 38/413 (9%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQ 208 I + + +A F +T L Y + +V N + S G++ + H+ Sbjct: 149 IPMTYTDAAGNTFTKTFVLKRGEYAVNVNYSVQNAGEKPLEISTFGQLKQSINLPSHR-D 207 Query: 209 TATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 T ++ F + G D+ + K+ I ++ N + + W+ + +Y+A+ ++P Sbjct: 208 TGSSNFALHTFRGAAYSTPDEKYEKYKFDTIAENENLNVNAKDGWVAMLQQYFATAWVPR 267 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + + L +G A + + + + PG++ T+ L+ G P I +A Sbjct: 268 NDGTNNFYTANLGNGIAA--IGYKSQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA 321 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S Sbjct: 322 -PHLDLTVDYGWLWFISQPLFKLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSM 380 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F A+Y + Sbjct: 381 AKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYM 439 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + S+E+RHAPF WI DL+A D P+Y I PI+M ++MF K Sbjct: 440 LMGSIELRHAPFALWIHDLSAQD-----------PYY--------ILPILMGVTMFFIQK 480 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 481 MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|157964068|ref|YP_001504102.1| 60 kDa inner membrane insertion protein [Shewanella pealeana ATCC 700345] gi|189036363|sp|A8HAI0|OXAA_SHEPA RecName: Full=Inner membrane protein oxaA gi|157849068|gb|ABV89567.1| 60 kDa inner membrane insertion protein [Shewanella pealeana ATCC 700345] Length = 545 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 123/379 (32%), Positives = 200/379 (52%), Gaps = 34/379 (8%) Query: 183 VDTVTNNSID-QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 VD NN+ D Q++ G+I +H + + ++ + +KYS + + Sbjct: 186 VDYKINNTSDAQLQVQMYGQI-KHSIKKSESSMMMPTYRGGAFSTADTRYEKYS-FDDMA 243 Query: 242 ISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 N +S W+ + Y+ S ++P + F +S G F I PG Sbjct: 244 DKNLDKSTLGGWVAMLQHYFVSAWVPPANDK-NIIFSSVSAG-GLANIGFRGALYDIAPG 301 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + + G K+ + P +++D+G+ +++A P++ L+ +F ++VGN Sbjct: 302 TEQSIKAEFYVGPKDQEALSALS-----PSLNLVVDYGFLWWLAVPIYKLLMFFQSIVGN 356 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +GIAI+L T+ V+ + +PL K QY S A M+N+QPK+ EL+E+F Q + +AM++LY Sbjct: 357 WGIAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLAELKERFGDD-RQKMGQAMMELY 415 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI DL+ D Sbjct: 416 KKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQD---------- 465 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAG 537 P+Y + PI+M +SMF+ KM P P D Q ++ WMPV+F FPAG Sbjct: 466 -PYY--------VMPILMGISMFVMQKMQPMAPTMDPMQVKMMQWMPVIFTVFFLWFPAG 516 Query: 538 LIIYWSWSNVISIVQQAVI 556 L++YW N+++I QQ +I Sbjct: 517 LVLYWLVGNLVAITQQKII 535 >gi|330831724|ref|YP_004394676.1| inner membrane protein oxaA [Aeromonas veronii B565] gi|328806860|gb|AEB52059.1| Inner membrane protein oxaA [Aeromonas veronii B565] Length = 548 Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 145/521 (27%), Positives = 247/521 (47%), Gaps = 58/521 (11%) Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + ++A A + + + + L +++ +G L + L+ + P V L S + Sbjct: 55 VSEQANATAARKLITVSSDVLKLTLDTQGGDVVSAELLSHKLEEGKDQPFVLLTS--KPE 112 Query: 118 NAYFAELDYVS-------TANNIELPNSNTVWNLISGK--ILTPTTPIKLVFKNANNILF 168 + Y A+ V + T + L G+ ++ P T + ++ ++F Sbjct: 113 HLYIAQSGLVGRNGPDSQAEGRPTYEAAQTSYQLADGQDQVVVPMT-----WTDSKGVVF 167 Query: 169 ERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL--- 224 + L Y + + N S + ++ G++ + T QEG V Sbjct: 168 TKEFILKRGDYAVGVDYKIDNKSAEPVQVQFYGQL-----KQTVATPKDQEGHAMVASAY 222 Query: 225 --GDKSLVEQKYS----DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G S + +Y D K + N W+ + Y+ S + P+ + + +S + + Sbjct: 223 RGGAFSTEDTRYKKYTFDEMKDADLNKTTKGGWVAMLQHYFVSAWAPNADDT-NSFYSRV 281 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 G + + A + + G+ T+ L+ G P + +A ++ +D+GW Sbjct: 282 IPGKGQAIIGYKAPLVDVAAGQQAEVTSKLWVG----PKLQDQMAKVA-NHLDLTVDYGW 336 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +FIA+P+ L++ F+ V N+G+AI++ T+ V+ + FPL K QY S A M+ +QPKI Sbjct: 337 LWFIAQPLHWLLTVFHGFVQNWGLAIIMLTLLVRGIMFPLTKAQYTSMAKMRMLQPKIAA 396 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 LRE+F Q + + M++LYK +NPL GC PIL+Q+P+F A+Y + S+E+RHAPF Sbjct: 397 LRERFGDD-RQKMSQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWALMESVELRHAPF 455 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQA 517 WI DL+ DP F L PI+M SM+ KMSP D Q Sbjct: 456 ALWITDLSVKDP--FFVL-----------------PILMGASMWYLQKMSPTTVTDPMQQ 496 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ +MP++F F FPAGL +YW SNVISI+QQ +I + Sbjct: 497 KVMQFMPIIFTFMFLWFPAGLTLYWLVSNVISIIQQTIIYR 537 >gi|148361343|ref|YP_001252550.1| preprotein translocase subunit YidC [Legionella pneumophila str. Corby] gi|296108684|ref|YP_003620385.1| preprotein translocase YidC subunit [Legionella pneumophila 2300/99 Alcoy] gi|166975873|sp|A5IIK4|OXAA_LEGPC RecName: Full=Inner membrane protein oxaA gi|148283116|gb|ABQ57204.1| Preprotein translocase subunit YidC [Legionella pneumophila str. Corby] gi|295650586|gb|ADG26433.1| preprotein translocase YidC subunit [Legionella pneumophila 2300/99 Alcoy] Length = 556 Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 112/330 (33%), Positives = 188/330 (56%), Gaps = 29/330 (8%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 +SD+ KS++ + W+ + Y+ S ++P+ ++ ++F L+ Y + Sbjct: 245 FSDMSKSNL-DVDAKGGWIAMQQHYFLSAWVPNADS--ENKFYTLAT-DKDYTIGAVSQP 300 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 IT+ P + + L+ G P I K ++ P ++ +D+G +F++ +F LM Sbjct: 301 ITVKPKEDKIVGSKLYIG----PEITSVLKGIS-PSLDLTVDYGILWFLSSLLFSLMKAI 355 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y +VGN+G +I+L TV +KL F+ L+ Y S A+M+ +QPK+ LRE++ ++ Q Sbjct: 356 YTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAKISQ- 414 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WI DLA+ADP ++ Sbjct: 415 ATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASADPYHV 474 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 P+IM +M IQ K++P PAD QA ++ ++P++F + Sbjct: 475 L-------------------PLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTGLFWN 515 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW +N +SI+QQ I + + E Sbjct: 516 FPSGLVLYWIVNNTLSILQQWYITRKYSDE 545 >gi|52843195|ref|YP_096994.1| inner membrane protein, 60 kDa [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81680366|sp|Q5ZR81|OXAA_LEGPH RecName: Full=Inner membrane protein oxaA gi|52630306|gb|AAU29047.1| inner membrane protein, 60 kDa [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 556 Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 112/330 (33%), Positives = 188/330 (56%), Gaps = 29/330 (8%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 +SD+ KS++ + W+ + Y+ S ++P+ ++ ++F L+ Y + Sbjct: 245 FSDMSKSNL-DVDAKGGWIAMQQHYFLSAWVPNADS--ENKFYTLAT-DKDYTIGAVSQP 300 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 IT+ P + + L+ G P I K ++ P ++ +D+G +F++ +F LM Sbjct: 301 ITVKPKEDKIVGSKLYIG----PEITSVLKGIS-PSLDLTVDYGILWFLSSLLFSLMKAI 355 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y +VGN+G +I+L TV +KL F+ L+ Y S A+M+ +QPK+ LRE++ ++ Q Sbjct: 356 YTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAKISQ- 414 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WI DLA+ADP ++ Sbjct: 415 ATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASADPYHV 474 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 P+IM +M IQ K++P PAD QA ++ ++P++F + Sbjct: 475 L-------------------PLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTGLFWN 515 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW +N +SI+QQ I + + E Sbjct: 516 FPSGLVLYWIVNNTLSILQQWYITRKYSDE 545 >gi|300719144|ref|YP_003743947.1| Inner membrane protein [Erwinia billingiae Eb661] gi|299064980|emb|CAX62100.1| Inner membrane protein [Erwinia billingiae Eb661] Length = 548 Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 142/518 (27%), Positives = 243/518 (46%), Gaps = 75/518 (14%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS-----------------P 113 + +K L IN +G + L Y + S+ P L + P Sbjct: 61 ITVKTDVLTLHINTRGGDIEQAQLLTYPDKLGSSQPFQLLETNPGFLYQAQSGLTGRNGP 120 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 N N A + +T ++ E+ + + I + + N + +T Sbjct: 121 DNPANG--ARPLFTTTQDSFEMADGQSELR------------IPMTYTAENGATYTKTFV 166 Query: 174 LDEHYLFKIVDTVTNNSIDQ-IRFSPRGRIM------RHKPQTATNTFGVQEGFIAVLGD 226 L VD NN+ Q + + G++ +H+ T +N F + A Sbjct: 167 LKRGEFAINVDYQVNNTTQQPLEMAMFGQLKQTIDLPKHR-DTGSNNFALHTFRGAAYSS 225 Query: 227 KSLVEQKY-----SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 +KY SD E S + +N W+ + +Y+A+ ++P + L +G Sbjct: 226 SETNYEKYKFDKISDNENLSTTT---NNGWVAMLQQYFATAWVPRTNGTNTLYTSNLGNG 282 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 A + + +TI PG L+ G P I +A P ++ +D+GW +F Sbjct: 283 IAAI--GYKSAPVTIAPGAQQNLAATLWVG----PEIQDKMAAIA-PHLDLTVDYGWLWF 335 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE Sbjct: 336 ISQPLFKLLKFLHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRE 395 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + + Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF W Sbjct: 396 RIGED-KQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMGSIELRHAPFALW 454 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL 520 I DL+A D P+Y I PI+M ++MF KMSP D Q I+ Sbjct: 455 IHDLSAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIM 495 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 496 TFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|307611885|emb|CBX01601.1| hypothetical protein LPW_32881 [Legionella pneumophila 130b] Length = 556 Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 112/330 (33%), Positives = 188/330 (56%), Gaps = 29/330 (8%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 +SD+ KS++ + W+ + Y+ S ++P+ ++ ++F L+ Y + Sbjct: 245 FSDMSKSNL-DVDAKGGWIAMQQHYFLSAWVPNADS--ENKFYTLAT-DKDYTIGAVSQP 300 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 IT+ P + + L+ G P I K ++ P ++ +D+G +F++ +F LM Sbjct: 301 ITVKPKEDKIVGSKLYIG----PEITSVLKGIS-PSLDLTVDYGILWFLSSLLFSLMKAI 355 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y +VGN+G +I+L TV +KL F+ L+ Y S A+M+ +QPK+ LRE++ ++ Q Sbjct: 356 YTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAKISQ- 414 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WI DLA+ADP ++ Sbjct: 415 ATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASADPYHV 474 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 P+IM +M IQ K++P PAD QA ++ ++P++F + Sbjct: 475 L-------------------PLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTGLFWN 515 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW +N +SI+QQ I + + E Sbjct: 516 FPSGLVLYWIVNNTLSILQQWYITRKYSDE 545 >gi|239503913|ref|ZP_04663223.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii AB900] Length = 586 Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 150/510 (29%), Positives = 245/510 (48%), Gaps = 66/510 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD---------------- 125 IN KG + L + SN P V L ++ K Y A+ Sbjct: 96 INPKGGDIVRIELLSHDKSKDSNQPFVML--ENDAKRTYVAQSGLIGLNGPDSSRGGRPL 153 Query: 126 YVSTANNIELPNSNTVWNLI--SGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKI 182 Y + L ++ V + S K+LT + +VFK + +T + + Y + Sbjct: 154 YAVEKTSYTLADAKGVQDQSGHSEKVLT----VPMVFKTPEGVEIIKTFTFTQGQYPIVV 209 Query: 183 VDTVTNNSIDQIRFSPRGRIMRH------KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 V N S + G++ R K T G G D + K+++ Sbjct: 210 KHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFLGGAWGTPDAHYNKLKFAN 269 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPS--KETSFHSQFKYLSDGHARYQAK------ 288 + + N W+ + Y+ S +IP K T + Q Y++ +R A Sbjct: 270 FSEEKL-NTEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQ-PYVAKLESRQSADNMNIIG 327 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F++ I + G S+ L++G P + KDLA+ +D+GW + IAK +F+ Sbjct: 328 FTSPVINVPVGTSMEVDAKLYSG----PKVQSELKDLAV-GLNQTVDYGWLWPIAKLLFL 382 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ I P++ ++E+F + Sbjct: 383 GLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRVIAPEMQRMKEEFGEDRM 442 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + Q+ M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+RHAP+ GWI+DL+A Sbjct: 443 RFSQE-MMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELRHAPWLGWIQDLSAM 501 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P+IM +MF Q ++P PAD QA + MP++F Sbjct: 502 DPWFIL-------------------PLIMGATMFAQQMLNPQPADPMQAKVFRIMPIMFT 542 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FPAGL++YW +N I+I+QQ I K Sbjct: 543 VFMLFFPAGLVLYWIVNNSITILQQWFINK 572 >gi|295095341|emb|CBK84431.1| protein translocase subunit yidC [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 547 Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 121/413 (29%), Positives = 215/413 (52%), Gaps = 38/413 (9%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQ 208 I + + +A F +T +L Y + +V N + S G++ + H+ Sbjct: 148 IPMTYTDAAGNTFTKTFTLKRGEYAVNVGYSVQNAGAKPLEISTFGQLKQSINLPSHR-D 206 Query: 209 TATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 T ++ F + G D + K+ I + N W+ + +Y+A+ ++P+ Sbjct: 207 TGSSNFALHTFRGAAYSTPDTKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWVPN 266 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + + L +G A + + + + PG++ + L+ G P I +A Sbjct: 267 NDGTNNFYTANLGNGIAA--IGYKSQPVLVQPGQTGKLASTLWVG----PEIQDKMAAVA 320 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S Sbjct: 321 -PHLDLTVDYGWLWFISQPLFKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSM 379 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+L+Q+P+F A+Y + Sbjct: 380 AKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYM 438 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + S+E+RHAPF WI DL+A D P+Y I PI+M ++MF K Sbjct: 439 LMGSVELRHAPFALWIHDLSAQD-----------PYY--------ILPILMGVTMFFIQK 479 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 480 MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 532 >gi|54295839|ref|YP_128254.1| hypothetical protein lpl2930 [Legionella pneumophila str. Lens] gi|81679103|sp|Q5WSE9|OXAA_LEGPL RecName: Full=Inner membrane protein oxaA gi|53755671|emb|CAH17174.1| hypothetical protein lpl2930 [Legionella pneumophila str. Lens] Length = 556 Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 112/330 (33%), Positives = 188/330 (56%), Gaps = 29/330 (8%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 +SD+ KS++ + W+ + Y+ S ++P+ ++ ++F L+ Y + Sbjct: 245 FSDMSKSNL-DVDAKGGWIAMQQHYFLSAWVPNADS--ENKFYTLAT-DKDYTIGAVSQP 300 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 IT+ P + + L+ G P I K ++ P ++ +D+G +F++ +F LM Sbjct: 301 ITVKPKEDKIVGSKLYIG----PEITSVLKGIS-PSLDLTVDYGILWFLSSLLFSLMKAI 355 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y +VGN+G +I+L TV +KL F+ L+ Y S A+M+ +QPK+ LRE++ ++ Q Sbjct: 356 YTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAKISQ- 414 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WI DLA+ADP ++ Sbjct: 415 ATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASADPYHV 474 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 P+IM +M IQ K++P PAD QA ++ ++P++F + Sbjct: 475 L-------------------PLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTGLFWN 515 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW +N +SI+QQ I + + E Sbjct: 516 FPSGLVLYWIVNNTLSILQQWYITRKYSDE 545 >gi|260553776|ref|ZP_05826046.1| preprotein translocase subunit YidC [Acinetobacter sp. RUH2624] gi|260405080|gb|EEW98580.1| preprotein translocase subunit YidC [Acinetobacter sp. RUH2624] Length = 586 Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 150/510 (29%), Positives = 245/510 (48%), Gaps = 66/510 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD---------------- 125 IN KG + L + SN P V L ++ K Y A+ Sbjct: 96 INPKGGDIVRIELLSHDKSKDSNQPFVML--ENDAKRTYVAQSGLIGLNGPDSSRGGRPL 153 Query: 126 YVSTANNIELPNSNTVWNLI--SGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKI 182 Y + L ++ V + S K+L+ + +VFK + +T + + Y + Sbjct: 154 YAVEKTSYTLADAKGVQDQKGQSEKVLS----VPMVFKTPEGVEIIKTFTFTQGQYPIVV 209 Query: 183 VDTVTNNSIDQIRFSPRGRIMRH------KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 V N S + G++ R K T G G D + K+++ Sbjct: 210 SHQVINRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFLGGAWGTPDSHYNKLKFAN 269 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPS--KETSFHSQFKYLSDGHARYQAK------ 288 + + N W+ I Y+ S +IP K T + Q Y++ +R A Sbjct: 270 FSEEKL-NADAKGGWVAIVQHYFVSAWIPGNLKLTQANGQ-PYVAKLESRQSADHMNIIG 327 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F++ I + G S+ L++G P + KDLA+ +D+GW + IAK +F+ Sbjct: 328 FTSPVINVPAGTSMEVDAKLYSG----PKVQSELKDLAV-GLNQTVDYGWLWPIAKLLFL 382 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ I P++ ++E+F + Sbjct: 383 GLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRVIAPEMQRMKEEFGEDRM 442 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + Q+ M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+RHAP+ GWI+DL+A Sbjct: 443 RFSQE-MMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELRHAPWLGWIQDLSAM 501 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P+IM +MF Q ++P PAD QA + MP++F Sbjct: 502 DPWFIL-------------------PLIMGATMFAQQMLNPQPADPMQAKVFRIMPIMFT 542 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FPAGL++YW +N I+I+QQ I K Sbjct: 543 VFMLFFPAGLVLYWIVNNSITILQQWFINK 572 >gi|323516074|gb|ADX90455.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii TCDC-AB0715] Length = 574 Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 150/510 (29%), Positives = 244/510 (47%), Gaps = 66/510 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD---------------- 125 IN KG + L + SN P V L ++ K Y A+ Sbjct: 84 INPKGGDIVRIELLSHDKSKDSNQPFVML--ENDAKRTYVAQSGLIGLNGPDSSRGGRPL 141 Query: 126 YVSTANNIELPNSNTVWNLI--SGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKI 182 Y + L ++ V + S K+LT + +VFK + +T + + Y + Sbjct: 142 YAVEKTSYTLADAKGVQDQSGHSEKVLT----VPMVFKTPEGVEIIKTFTFTQGQYPIVV 197 Query: 183 VDTVTNNSIDQIRFSPRGRIMRH------KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 V N S + G++ R K T G G D + K+++ Sbjct: 198 KHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFLGGAWGTPDAHYNKLKFAN 257 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPS--KETSFHSQFKYLSDGHARYQAK------ 288 + + N W+ + Y+ S +IP K T + Q Y++ +R A Sbjct: 258 FSEEKL-NTEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQ-PYVAKLESRQSADHMNIIG 315 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F++ I + G S+ L++G P + KDLA+ +D+GW + IAK +F+ Sbjct: 316 FTSPVINVPAGTSMEVDAKLYSG----PKVQSELKDLAV-GLNQTVDYGWLWPIAKLLFL 370 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ I P++ ++E+F + Sbjct: 371 GLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRVIAPEMQRMKEEFGEDRM 430 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + Q+ M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+RHAP+ GWI DL+A Sbjct: 431 RFSQE-MMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELRHAPWLGWIHDLSAM 489 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P+IM +MF Q ++P PAD QA + MP++F Sbjct: 490 DPWFIL-------------------PLIMGATMFAQQMLNPQPADPMQAKVFRIMPIMFT 530 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FPAGL++YW +N I+I+QQ I K Sbjct: 531 VFMLFFPAGLVLYWIVNNSITILQQWFINK 560 >gi|290477350|ref|YP_003470271.1| preprotein translocase cooperates with SecYEG and SecDFyajC translocon membrane protein [Xenorhabdus bovienii SS-2004] gi|289176704|emb|CBJ83513.1| preprotein translocase, cooperates with SecYEG and SecDFyajC translocon, membrane component [Xenorhabdus bovienii SS-2004] Length = 537 Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 154/583 (26%), Positives = 275/583 (47%), Gaps = 88/583 (15%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ---PNQVDNSYAAVLI 58 +RN + + +S ++ AW E+ N + Q +Q P+ +S LI Sbjct: 4 QRNLLFIALLFVSFLVWQAW---------EKDQNPQPTAQITQQANTPSSEASSGQGKLI 54 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + LS+ IN +G ++ +L Y + SN P L S + Sbjct: 55 TVKTDVLSLH-------------INTRGGDIEEADLLAYPDTLGSNKPFKLL--ESTPEF 99 Query: 119 AYFAELDYVST---ANNIELPNSNTVWN---LISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ T N + P +T + L G+ I + + + +++ +T Sbjct: 100 IYQAQSGLTGTNGPDNQADRPFYHTTQDSYVLADGQ---NELRIPMTYTAPDGVVYVKTF 156 Query: 173 SLDE-HYLFKI---VDTVTNNSIDQIRFS--------PRGRIMRHKPQTATNTFGVQ--E 218 L +Y + +D VT+ + F P+ R T ++ F + Sbjct: 157 ILKRGNYAVSVDYNIDNVTDKPLQMAFFGQLKQSVELPKSR------DTGSSNFALHTYR 210 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G + + K+ DIE +++ + W+ + +Y+A+ ++P ++ + F Y Sbjct: 211 GAAYSSAEAKYEKYKFGDIEDKALA-VTTNGGWVAMLQQYFATAWVPGANST--NTF-YT 266 Query: 279 SDGHARYQA--KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 D + A + + I P ++ L+ G P I ++A P ++ +D+ Sbjct: 267 IDLKNQKMAIIGYKGETVNIAPNSKQNISSTLWVG----PEIQDKMAEVA-PHLDLTVDY 321 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW +FI++P+F L+ + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPKI Sbjct: 322 GWLWFISQPLFKLLKFLHEFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRLLQPKI 381 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +RE+ Q + + M+ LYKT +NPL GC P+++Q+P+F A+Y ++ S+E+RHA Sbjct: 382 TAMRERHGDDR-QRMSQEMMALYKTEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHA 440 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKG 515 PF GWI+DL+A D P+Y I P++M +MF+ K+SP D Sbjct: 441 PFIGWIEDLSAQD-----------PYY--------ILPLLMGATMFVIQKLSPTTVTDPM 481 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ VI + Sbjct: 482 QQKIMTYMPVMFTVFFLWFPSGLVLYYIVSNLVTIIQQQVIFR 524 >gi|262040469|ref|ZP_06013712.1| YidC/Oxa1 family membrane protein insertase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042222|gb|EEW43250.1| YidC/Oxa1 family membrane protein insertase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 548 Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 121/413 (29%), Positives = 209/413 (50%), Gaps = 37/413 (8%) Query: 156 IKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM--------RHK 206 I L + + +F +T +L Y + +V N S + S G++ R Sbjct: 148 IPLTYTDKAGNVFTKTFTLKRGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDT 207 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 +T G D + K+ I + N N W+ + +Y+ + ++P Sbjct: 208 QTGGLSTMHTFRGAAFSTADSKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPR 267 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + F + G+ + + + + PG++ + L+ G P I +A Sbjct: 268 NNGT--NNFYTANLGNGVVAIGYKSQPVLVQPGQTDKLQSTLWVG----PAIQDKMAAVA 321 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S Sbjct: 322 -PHLDLTVDYGWLWFISQPLFKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSM 380 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F A+Y + Sbjct: 381 AKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYM 439 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 +S S+E+RHAPF WI DL+A D P+Y I PIIM +MF K Sbjct: 440 LSASVELRHAPFILWIHDLSAQD-----------PYY--------ILPIIMGATMFFIQK 480 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 481 MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR 533 >gi|296105489|ref|YP_003615635.1| putative inner membrane protein translocase component YidC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059948|gb|ADF64686.1| putative inner membrane protein translocase component YidC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 546 Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 121/413 (29%), Positives = 214/413 (51%), Gaps = 38/413 (9%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQ 208 I + + +A F +T +L Y + +V N + S G++ + H+ Sbjct: 147 IPMTYTDAAGNTFTKTFTLKRGEYAVNVGYSVQNAGAKPLEVSTFGQLKQSINLPSHR-D 205 Query: 209 TATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 T ++ F + G D + K+ I + N W+ + +Y+A+ +IP+ Sbjct: 206 TGSSNFALHTFRGAAYSTPDAKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPN 265 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + + F + G + + + + PG++ + L+ G P I +A Sbjct: 266 NDGT--NNFYTANLGKGIAAIGYKSQPVLVQPGQTGKLASTLWVG----PEIQDKMAAVA 319 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S Sbjct: 320 -PHLDLTVDYGWLWFISQPLFKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSM 378 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+L+Q+P+F A+Y + Sbjct: 379 AKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYM 437 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + S+E+RHAPF WI DL+A D P+Y I PI+M ++MF K Sbjct: 438 LMGSVELRHAPFALWIHDLSAQD-----------PYY--------ILPILMGVTMFFIQK 478 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 479 MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 531 >gi|320539850|ref|ZP_08039509.1| putative cytoplasmic insertase into membrane protein, Sec system [Serratia symbiotica str. Tucson] gi|320030036|gb|EFW12056.1| putative cytoplasmic insertase into membrane protein, Sec system [Serratia symbiotica str. Tucson] Length = 545 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 120/411 (29%), Positives = 210/411 (51%), Gaps = 37/411 (9%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQ 208 I L F + + ++ +T L HY + + N S + + G++ +H+ Sbjct: 149 IPLSFTSKDGTIYTKTFVLKRNHYAVSVDYYIDNKSTTPLELTLFGQLKQTTELPKHR-D 207 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 T +N F + A QKY+ +K N W+ + +Y+A+ ++P+ + Sbjct: 208 TGSNNFALHTFRGAAYSSSEDKYQKYA-FDKDEKLNVTTQGGWIAMLQQYFATAWVPATQ 266 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 S + F + G F + + + P L+ G P + LA Sbjct: 267 GS--NTFYTANPGDNLSTIGFKSTPVVVQPSTQQQLNATLWVG----PELQDQMAQLA-A 319 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 ++ +D+GW +FI++P+F L+ + + +GN+G +I++ T V+ + +PL K QY S A Sbjct: 320 HLDLTVDYGWLWFISQPLFKLLKFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAK 379 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QPK+ +RE+ Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ Sbjct: 380 MRMLQPKMQAMRERIGDD-KQRMSQEMMALYKSEKVNPLGGCLPLIVQMPIFLALYYMLM 438 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S+E+RHAPF WI DL+A D P+Y I PI+M ++MF KMS Sbjct: 439 GSVELRHAPFALWIHDLSAQD-----------PYY--------ILPILMGVTMFFIQKMS 479 Query: 509 PPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 480 PTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 530 >gi|294138798|ref|YP_003554776.1| inner membrane protein oxaA [Shewanella violacea DSS12] gi|293325267|dbj|BAI99997.1| inner membrane protein oxaA [Shewanella violacea DSS12] Length = 544 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 112/323 (34%), Positives = 181/323 (56%), Gaps = 35/323 (10%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D++K ++ W + Y+ S +IP E ++ F +S G + F Sbjct: 245 DLDKKTLGG------WAAMLQHYFVSAWIPP-ENDQNTIFSSISAG-GQANIGFRGAIYD 296 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I PG + T ++ + G K+ + L +++D+G+ +++A P+ L+ +F + Sbjct: 297 IAPGATQTISSQFYVGPKDQEALSEISDSL-----NLVVDYGFLWWLAVPINKLLMFFQS 351 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +V N+G+AI+L T+ V+ + FPL K QY S A M+N+QPK+ E++E+F Q + +AM Sbjct: 352 IVSNWGLAIILITLTVRGMLFPLTKAQYTSMAKMRNLQPKLAEMKERFGDDR-QKMGQAM 410 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NP+ GC PILLQ+P+F ++Y V+ S+E+RHAPF WI DL+ D Sbjct: 411 MELYKKEKVNPMGGCLPILLQMPIFISLYWVLMESVELRHAPFMLWITDLSVQD------ 464 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533 P+Y + PI+M +SMF+ KM P P D Q ++ WMPVVF Sbjct: 465 -----PYY--------VMPILMGISMFVMQKMQPMAPTMDPMQQKMMQWMPVVFTVFFLW 511 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 FPAGL++YW N+++I QQ +I Sbjct: 512 FPAGLVLYWLVGNLVAITQQKII 534 >gi|270158408|ref|ZP_06187065.1| inner membrane protein OxaA [Legionella longbeachae D-4968] gi|289166753|ref|YP_003456891.1| cytoplasmic insertase into membrane protein, Sec system [Legionella longbeachae NSW150] gi|269990433|gb|EEZ96687.1| inner membrane protein OxaA [Legionella longbeachae D-4968] gi|288859926|emb|CBJ13912.1| cytoplasmic insertase into membrane protein, Sec system [Legionella longbeachae NSW150] Length = 555 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 116/330 (35%), Positives = 184/330 (55%), Gaps = 29/330 (8%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 +SD+ K+++ + W+ + Y+ S +IP ++ ++F Y + Y + Sbjct: 245 FSDMNKTNL-DVDSKGGWVAMQQHYFLSAWIPDVNST--NKF-YTRAVNNDYTIGAVSQP 300 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 IT+ P + T + L+ G P I K +A P ++ +D+G +F++ +F LM Sbjct: 301 ITLQPSQEKTLGSKLYVG----PEITSTLKGIA-PSLDLTVDYGILWFLSSLLFSLMKII 355 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 N+VGN+G +I+L TV +KL F+ L+ Y S A M+ +QPK+ LRE++ ++ Q Sbjct: 356 NNVVGNWGWSIVLVTVLIKLAFYRLSAASYKSMAGMRKLQPKLQALRERYGDDKAKISQA 415 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M +LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WIKDL+ ADP ++ Sbjct: 416 TM-ELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFILWIKDLSDADPYHV 474 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 P+IM +M IQ K++P P D QA ++ ++PV+F S Sbjct: 475 L-------------------PLIMGATMLIQQKLNPAPPDPMQAKVMMFLPVLFTGLFWS 515 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW +N +SI+QQ I + E Sbjct: 516 FPAGLVLYWIVNNTLSILQQWYITRKFSDE 545 >gi|152972613|ref|YP_001337759.1| putative inner membrane protein translocase component YidC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238897216|ref|YP_002921964.1| putative inner membrane protein translocase component YidC [Klebsiella pneumoniae NTUH-K2044] gi|330005210|ref|ZP_08305169.1| membrane protein insertase, YidC/Oxa1 family domain protein [Klebsiella sp. MS 92-3] gi|166975872|sp|A6TG08|OXAA_KLEP7 RecName: Full=Inner membrane protein oxaA gi|150957462|gb|ABR79492.1| inner membrane protein translocase component YidC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549546|dbj|BAH65897.1| inner membrane protein translocase component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328536342|gb|EGF62704.1| membrane protein insertase, YidC/Oxa1 family domain protein [Klebsiella sp. MS 92-3] Length = 548 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 121/413 (29%), Positives = 209/413 (50%), Gaps = 37/413 (8%) Query: 156 IKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM--------RHK 206 I L + + +F +T +L Y + +V N S + S G++ R Sbjct: 148 IPLTYTDKAGNVFTKTFTLKRGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDT 207 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 +T G D + K+ I + N N W+ + +Y+ + ++P Sbjct: 208 QTGGLSTMHTFRGAAFSTADSKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPR 267 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + F + G+ + + + + PG++ + L+ G P I +A Sbjct: 268 NNGT--NNFYTANLGNGVVAIGYKSQPVLVQPGQTDKLQSTLWVG----PAIQDKMAAVA 321 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S Sbjct: 322 -PHLDLTVDYGWLWFISQPLFKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSM 380 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F A+Y + Sbjct: 381 AKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYM 439 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 +S S+E+RHAPF WI DL+A D P+Y I PIIM +MF K Sbjct: 440 LSASVELRHAPFILWIHDLSAQD-----------PYY--------ILPIIMGATMFFIQK 480 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 481 MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR 533 >gi|262371177|ref|ZP_06064498.1| inner membrane protein oxaA [Acinetobacter johnsonii SH046] gi|262313907|gb|EEY94953.1| inner membrane protein oxaA [Acinetobacter johnsonii SH046] Length = 587 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 170/608 (27%), Positives = 271/608 (44%), Gaps = 88/608 (14%) Query: 3 RNWNYFVAIALSVIIVY----AWQNFYVYPRIEEMNNERKNIQTVKQPNQVD--NSYAAV 56 + W F + ++ Y AWQ Y + E + + V D N+ A Sbjct: 2 QQWARFAILGAMFVVAYLLILAWQKDYGH---AETQPQPQQAAAVSHEVSADLPNAQTAS 58 Query: 57 LIDDRAQA--LSMSPRVELK---NPSLIGS--------INLKGAQFDDLNLRGYHLDVSS 103 D QA + P E K N LI IN KG + L + S Sbjct: 59 AASDMPQANIATQQPATEAKASVNQQLISVQTDLYHLWINPKGGDIVRIELLNHDKSKDS 118 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN-----------TVWNLISGKILTP 152 N V L S+ K Y A+ + + P+SN + + L K + Sbjct: 119 NEAFVML--ESDAKRTYVAQSGLIG----LNGPDSNRSGRPMYEIEKSAYTLNDAKAVQT 172 Query: 153 TT-------PIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR 204 + +V K A+ + +T + + Y + V N S + G++ R Sbjct: 173 EDGKSIKVLTVPMVLKTADGVEIIKTFTFKQGEYPVVVNHKVVNRSGQNWQGQMFGQLKR 232 Query: 205 H------KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKY 258 K T G G ++ + K+++ + + N W+ + Y Sbjct: 233 DNSDDPGKSDQGIFTLGTFLGGAWGSPEEHYNKLKFANFNEEKL-NVEAKGGWVAMVQHY 291 Query: 259 WASVFIPS--KETSFHSQFKYLSDGHARYQAK------FSANEITILPGKSITTTNFLFA 310 + S +IP K T + Q Y++ +R F++ IT+ G ++ Sbjct: 292 FVSAWIPGDLKLTQANGQ-PYVAKLESRKSTDDMNIIGFTSPTITVPAGTVAEIDATFYS 350 Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 G P + K+LA +D+GW + IAK +F+ + +F+ LVGN+G AI+L TV Sbjct: 351 G----PKVQSELKELAT-GLNQTVDYGWLWPIAKLLFLGLEFFHGLVGNWGWAIILLTVL 405 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 VKL+ +PL+ K Y S A M+ I P++ ++E+F + + Q+ M+ LYK +NPLAGC Sbjct: 406 VKLILWPLSSKSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQE-MMALYKREQVNPLAGC 464 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 P+LLQ+P+F A+Y V+ S+E+RHAP+ WI+DL+A DP I Sbjct: 465 LPLLLQMPIFLALYWVLMESVELRHAPWLLWIQDLSAMDPWFIL---------------- 508 Query: 491 GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 P++M +MFIQ ++P PAD QA + MP+VF + FPAGL++YW +N I+I Sbjct: 509 ---PLLMGATMFIQQSLNPQPADPMQAKVFKIMPIVFTVFMLFFPAGLVLYWIVNNSITI 565 Query: 551 VQQAVIMK 558 +QQ +I K Sbjct: 566 IQQTLINK 573 >gi|206575787|ref|YP_002241308.1| inner membrane protein OxaA [Klebsiella pneumoniae 342] gi|254772998|sp|B5XZP5|OXAA_KLEP3 RecName: Full=Inner membrane protein oxaA gi|206564845|gb|ACI06621.1| inner membrane protein OxaA [Klebsiella pneumoniae 342] Length = 548 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 121/413 (29%), Positives = 209/413 (50%), Gaps = 37/413 (8%) Query: 156 IKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM--------RHK 206 I L + + +F +T +L Y + +V N S + S G++ R Sbjct: 148 IPLTYTDKAGNVFTKTFTLKRGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDT 207 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 +T G D + K+ I + N N W+ + +Y+ + ++P Sbjct: 208 QTGGLSTMHTFRGAAFSTSDTKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPQ 267 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + F + G+ + + + + PG++ + L+ G P I +A Sbjct: 268 NNGT--NNFYTANLGNGIVAIGYKSQPVLVQPGQTDKLQSVLWVG----PAIQDKMAAVA 321 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S Sbjct: 322 -PHLDLTVDYGWLWFISQPLFKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSM 380 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F A+Y + Sbjct: 381 AKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYM 439 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 +S S+E+RHAPF WI DL+A D P+Y I PIIM +MF K Sbjct: 440 LSASVELRHAPFILWIHDLSAQD-----------PYY--------ILPIIMGATMFFIQK 480 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 481 MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR 533 >gi|261823805|ref|YP_003261911.1| inner membrane protein translocase component YidC [Pectobacterium wasabiae WPP163] gi|261607818|gb|ACX90304.1| membrane protein insertase, YidC/Oxa1 family domain containing [Pectobacterium wasabiae WPP163] Length = 543 Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 149/582 (25%), Positives = 265/582 (45%), Gaps = 80/582 (13%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + IAL + WQ + E N Q ++Q N+ + Sbjct: 4 QRN---LLLIALLFVTFMLWQAW------ETDKNPPATTQAIQQ---ATNAVTGDATNQG 51 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS--------- 112 A + +K L +IN +G + +L Y + S+ P L + Sbjct: 52 VPASGQGKLITVKTDVLSLTINTRGGDVEQAHLLAYPDTLGSDKPFHLLETTPEFVYQAQ 111 Query: 113 --------PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 P N N + +T ++ EL + + I + + A+ Sbjct: 112 SGLTGKNGPDNPANG--PRPLFTTTQDSFELADGQSELR------------IPMTYTAAD 157 Query: 165 NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGVQ 217 + + +T L Y + +V N S + + G++ +H+ T ++ F + Sbjct: 158 GVTYTKTFVLKRGDYALNVDYSVNNTSAQPLELTLFGQLKQSTELPKHR-DTGSSNFALH 216 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 A +KYS + N ++ W+ + +Y+A+ +IP+ T+ + F + Sbjct: 217 TYRGAAFSSSEDKYKKYSFGDMDEGLNITTNSGWVAMLQQYFATAWIPT--TAGANTF-F 273 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 S + + F A + + G L+ G P I +A P ++ +D+G Sbjct: 274 TSKDNGQAAIGFKATPVVVAAGSQQNLNATLWVG----PEIQDKMAAVA-PHLDLTVDYG 328 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +FI++P+F L+ + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ Sbjct: 329 WLWFISQPLFKLLKFLHGFIGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKLQ 388 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +RE+ Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAP Sbjct: 389 AMRERIGDD-KQRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAP 447 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQ 516 F WI DL+A D P+Y I PI+M ++MF KMSP D Q Sbjct: 448 FALWIHDLSAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQ 488 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 489 QKIMTYMPVIFTVFFLWFPSGLVMYYIVSNMVTILQQQLIYR 530 >gi|218781967|ref|YP_002433285.1| YidC translocase/secretase [Desulfatibacillum alkenivorans AK-01] gi|218763351|gb|ACL05817.1| YidC translocase/secretase [Desulfatibacillum alkenivorans AK-01] Length = 559 Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 126/339 (37%), Positives = 196/339 (57%), Gaps = 26/339 (7%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWAS--VFIPSKETSFHSQFKYLSDGHA 283 + S+ E K S EK W+ ++ +Y+ S VF ++E + L+ + Sbjct: 238 NNSMEEFKVS--EKKPEKTIQGPTGWVALTWRYFMSAVVFDQTQEGVIKAS---LNSANN 292 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Q F+ + I PG++ TT+ F G K+ ++ E +D+G+F+ IA Sbjct: 293 VAQTLFTGKPMAIPPGQTFTTSYKAFFGPKQGDILNKA-------GLENALDFGFFHVIA 345 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP +LM+ +N V N+G+ I+L T+ +K++ +PL K Y S MK +QP + ELREK+ Sbjct: 346 KPCLLLMNIMHNYVPNYGVVIILLTLLIKIVLWPLGSKSYRSMEKMKKLQPLMQELREKY 405 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K Q + + + LYKT +NP+ GCWP+L+QIP+F A YK++ +++E+RH+PF WI Sbjct: 406 KDDK-QKMNQEVFALYKTFKVNPMGGCWPMLIQIPIFIAFYKMLYVAIELRHSPFIWWIT 464 Query: 464 DLAAADPTNIFTLFGILPFYLPGFM----HVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 DL+A D LF LPF +P FM + + +IM SM +Q KMSPPP D QA + Sbjct: 465 DLSAPD-----RLFH-LPFPVP-FMAEPYGIPVLTLIMGASMLLQQKMSPPPGDPTQAKM 517 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +P+VF+F +FP+GL++YW +NV+SI QQ I K Sbjct: 518 MMLLPLVFLFIFINFPSGLVLYWLVNNVVSIAQQYYIGK 556 >gi|74318843|ref|YP_316583.1| protein translocase subunit yidC [Thiobacillus denitrificans ATCC 25259] gi|123611090|sp|Q3SF38|OXAA_THIDA RecName: Full=Inner membrane protein oxaA gi|74058338|gb|AAZ98778.1| preprotein translocase subunit YidC [Thiobacillus denitrificans ATCC 25259] Length = 546 Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 151/504 (29%), Positives = 242/504 (48%), Gaps = 54/504 (10%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 R ++ L +I+ G +L L GY + + + TL S T+ Y A+ +V Sbjct: 69 RAVVETDVLRATIDANGGDLRELQLLGYR-ETEDKNRVFTLFEDSRTR-PYLAQSGFVGG 126 Query: 130 ANNIELPNSNTVWNLISGKI-LTPTTP---IKLVFKNANNILFERTISLDEHYLF----- 180 LP + + L G LT + LV+ +A R + +++ ++F Sbjct: 127 G----LPTHRSTFELTPGTYRLTGGAARLEVPLVWNDA-----ARGVRVEKTFIFTRGSH 177 Query: 181 --KIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + V N + + +P + RH P+ + G K + ++D Sbjct: 178 EVAVRTRVVNRGKEPLDLTPYYQFTRHGEAPRGESFFLYTYTGPAFYTDAKKFQKVPFTD 237 Query: 237 IEKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 I+ S + F ++ N W+G+ ++ + ++P E S ++ S G Y A E Sbjct: 238 IQDGS-AEFEKTATNGWVGLVQHHFVAAWLP--EESVKREYYARSLGEGLYSAGVILAEG 294 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 + PG+ T T L+AG + + A P ++ D+GW +A P+F + Sbjct: 295 QLAPGQQKTFTVPLYAGPQSQAVLEK-----AAPGLDLARDYGWLTPLAYPIFWSLEKIE 349 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 LVGN+G AI++ T+ +KL +PL+ Y S A MK + P++ +L+E + + L +A Sbjct: 350 RLVGNWGWAIIILTILIKLALYPLSAAGYKSMAKMKKLTPRLQQLKETYGDDRAK-LHQA 408 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M ++YKT INPL GC PIL+QIPVF A+Y V+ ++EMR AP+ GWI DL A DP I Sbjct: 409 MAEMYKTEKINPLGGCLPILIQIPVFIALYWVLLAAVEMRGAPWLGWITDLTAPDPWYIL 468 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 PIIM ++ +Q+K++P P D QA I+ MPV F F Sbjct: 469 -------------------PIIMGVTSILQVKLNPQPMDPMQAKIMMIMPVAFTVMFVFF 509 Query: 535 PAGLIIYWSWSNVISIVQQAVIMK 558 PAGL++YW +N++SI QQ I K Sbjct: 510 PAGLVLYWVVNNILSIAQQWAINK 533 >gi|288932889|ref|YP_003436948.1| membrane protein insertase, YidC/Oxa1 family domain containing [Klebsiella variicola At-22] gi|288887618|gb|ADC55936.1| membrane protein insertase, YidC/Oxa1 family domain containing [Klebsiella variicola At-22] Length = 548 Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 121/413 (29%), Positives = 209/413 (50%), Gaps = 37/413 (8%) Query: 156 IKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM--------RHK 206 I L + + +F +T +L Y + +V N S + S G++ R Sbjct: 148 IPLTYTDKAGNVFTKTFTLKRGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDT 207 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 +T G D + K+ I + N N W+ + +Y+ + ++P Sbjct: 208 QTGGLSTMHTFRGAAFSTSDTKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPQ 267 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + F + G+ + + + + PG++ + L+ G P I +A Sbjct: 268 NNGT--NNFYTANLGNGIVAIGYKSQPVLVQPGQTDKLQSVLWVG----PAIQDKMAAVA 321 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S Sbjct: 322 -PHLDLTVDYGWLWFISQPLFKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSM 380 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F A+Y + Sbjct: 381 AKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYM 439 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 +S S+E+RHAPF WI DL+A D P+Y I PIIM +MF K Sbjct: 440 LSASVELRHAPFILWIHDLSAQD-----------PYY--------ILPIIMGATMFFIQK 480 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 481 MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR 533 >gi|290511687|ref|ZP_06551055.1| preprotein translocase YidC subunit [Klebsiella sp. 1_1_55] gi|289775477|gb|EFD83477.1| preprotein translocase YidC subunit [Klebsiella sp. 1_1_55] Length = 548 Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 121/413 (29%), Positives = 209/413 (50%), Gaps = 37/413 (8%) Query: 156 IKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM--------RHK 206 I L + + +F +T +L Y + +V N S + S G++ R Sbjct: 148 IPLTYTDKAGNVFTKTFTLKRGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDT 207 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 +T G D + K+ I + N N W+ + +Y+ + ++P Sbjct: 208 QTGGLSTMHTFRGAAFSTSDTKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPQ 267 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + F + G+ + + + + PG++ + L+ G P I +A Sbjct: 268 NNGT--NNFYTANLGNGIVAIGYKSQPVLVQPGQTDKLQSVLWVG----PAIQDKMAAVA 321 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S Sbjct: 322 -PHLDLTVDYGWLWFISQPLFKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSM 380 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F A+Y + Sbjct: 381 AKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYM 439 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 +S S+E+RHAPF WI DL+A D P+Y I PIIM +MF K Sbjct: 440 LSASVELRHAPFILWIHDLSAQD-----------PYY--------ILPIIMGATMFFIQK 480 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 481 MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR 533 >gi|229524907|ref|ZP_04414312.1| OxaI/YidC membrane insertion protein [Vibrio cholerae bv. albensis VL426] gi|229338488|gb|EEO03505.1| OxaI/YidC membrane insertion protein [Vibrio cholerae bv. albensis VL426] Length = 541 Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 131/404 (32%), Positives = 208/404 (51%), Gaps = 38/404 (9%) Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 AN I + +T L Y +V V NNS + + ++ + N G Sbjct: 159 QANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRG 218 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKE--TSFHSQ-F 275 D + + D++ ++S ++ + +W+ + Y+AS +IP E T +S+ Sbjct: 219 GAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQTQLYSRVI 278 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 L D R K AN G L+ G P + +A P ++++D Sbjct: 279 NNLGDMGIRTPNKTIAN------GDKAEFEATLWVG----PKLQEQMAAVA-PHLDLVVD 327 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +FIAKP+ L+S ++V N+G+AI+ T V+ +PL K QY S A M+ +QPK Sbjct: 328 YGWLWFIAKPLHWLLSVIQSVVINWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPK 387 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + +RE+ Q + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH Sbjct: 388 LQAMRERIGDDR-QRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRH 446 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 +PF+GWI DL+A D P+Y I P++M SMF+ KMSP D Sbjct: 447 SPFFGWIHDLSAQD-----------PYY--------ILPLLMGASMFVIQKMSPTTITDP 487 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 488 MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531 >gi|238793138|ref|ZP_04636766.1| Inner membrane protein oxaA [Yersinia intermedia ATCC 29909] gi|238727511|gb|EEQ19037.1| Inner membrane protein oxaA [Yersinia intermedia ATCC 29909] Length = 529 Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 153/521 (29%), Positives = 253/521 (48%), Gaps = 55/521 (10%) Query: 59 DDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPS 114 D +QA+ S + +L K L +IN +G + NL Y + S+ L +P+ Sbjct: 29 DKASQAVPGSGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELLETTPA 88 Query: 115 NTKNAYFAELDYVSTAN--NIELP---NSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 A N N E P T + L G+ I L F + +F Sbjct: 89 FVYQAQSGLTGKSGPDNPANGERPLFEAPQTSFVLADGQ---DELRIPLTFTGKDGSVFT 145 Query: 170 RTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTATNTFGVQ--EGF 220 +T L + Y + V N S + + G++ +H+ T +N F + G Sbjct: 146 KTFVLKRNDYAIGVDYHVKNASAAPLELTLFGQLKQSINLPKHR-DTGSNNFALHTYRGA 204 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-SKETSFHSQFKYLS 279 D + +SDIE ++ + W+ + +Y+A+ +IP + ET+ Y S Sbjct: 205 AYSSDDTKYKKYSFSDIEDKNM-DITTKGGWVAMLQQYFATAWIPVANETNTF----YSS 259 Query: 280 D-GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 D G+ F + I PG+ L+ G P I +A P ++ +D+GW Sbjct: 260 DLGNGLAAIGFKGAPVIIQPGEQKQLGATLWVG----PEIQDKMAVIA-PHLDLTVDYGW 314 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ Sbjct: 315 LWFISQPLFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAA 374 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF Sbjct: 375 MRERIGDD-KQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPF 433 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQA 517 WI DL+A D P+Y I PI+M ++M+ KMSP D Q Sbjct: 434 ILWIHDLSAQD-----------PYY--------ILPILMGITMYFIQKMSPTTVTDPMQQ 474 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ +MPV+F FPAGL++Y+ SN+++I+QQ +I + Sbjct: 475 KIMTFMPVIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 515 >gi|311281728|ref|YP_003943959.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Enterobacter cloacae SCF1] gi|308750923|gb|ADO50675.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Enterobacter cloacae SCF1] Length = 547 Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 147/538 (27%), Positives = 247/538 (45%), Gaps = 81/538 (15%) Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS- 112 A D A + +K L +IN +G + L Y ++ SN P L + Sbjct: 43 AGSAADQGVPASGQGKLITVKTDVLDLTINTRGGDVEQAELLAYPKELGSNEPFQLLETT 102 Query: 113 ----------------PSNTKNA----YFAELDYVSTA---NNIELPNSNTVWNLISGKI 149 P N N Y + D A N I +P W +G Sbjct: 103 PQFIYQAQSGLTGRDGPDNPANGPRPLYSVDKDTFVLADGQNEISIP---LTWTDKAGNT 159 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR----- 204 T T V K Y + +V N+S + S G++ + Sbjct: 160 FTKT----FVLKRG-------------EYAVNVDYSVKNSSDKPLEISTFGQLKQSINLP 202 Query: 205 -HKPQTATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWAS 261 H+ T ++ F + G D + K+ I + N + W+ + +Y+A+ Sbjct: 203 THR-DTGSSNFALHTFRGAAYSTPDAKYEKYKFDTIADNENLNVSAKDGWVAMLQQYFAT 261 Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 ++P + + + L +G A + + I PG++ T + L+ G P I Sbjct: 262 AWVPRNDGTNNFYTANLGNGIA--AIGYKSQPTLIQPGQTGTVGSTLWVG----PEIQDK 315 Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 +A P ++ +D+GW +FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K Sbjct: 316 MAAVA-PHLDLTVDYGWLWFISQPLFKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKA 374 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 QY S A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F Sbjct: 375 QYTSMAKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFL 433 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A+Y ++ S+E+RHAPF WI DL+A D P+Y I PI+M ++M Sbjct: 434 ALYYMLMGSVELRHAPFALWIHDLSAQD-----------PYY--------ILPILMGVTM 474 Query: 502 FIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F KMSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 475 FFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 532 >gi|229517141|ref|ZP_04406587.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC9] gi|229346204|gb|EEO11176.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC9] Length = 541 Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 129/404 (31%), Positives = 201/404 (49%), Gaps = 38/404 (9%) Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 AN I + +T L Y +V V NNS + + ++ + N G Sbjct: 159 QANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRG 218 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETS---FHSQF 275 D + + D++ ++S ++ + +W+ + Y+AS +IP E + Sbjct: 219 GAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVI 278 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 L D R K AN G L+ G K + P ++++D Sbjct: 279 NNLGDMGIRTPNKTIAN------GDKAEFEATLWVGPK-----LQDQMAATAPNLDLVVD 327 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +FIAKP+ L+S VGN+G+AI+ T V+ +PL K QY S A M+ +QPK Sbjct: 328 YGWLWFIAKPLHWLLSVIQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPK 387 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + +RE+ Q + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH Sbjct: 388 LQAMRERIGDDR-QRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRH 446 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 +PF+GWI DL+A D P+Y I P+ M SMF+ KMSP D Sbjct: 447 SPFFGWIHDLSAQD-----------PYY--------ILPLQMGASMFVIQKMSPTTITDP 487 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 488 MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531 >gi|90415380|ref|ZP_01223314.1| inner membrane protein, 60 kDa [marine gamma proteobacterium HTCC2207] gi|90332703|gb|EAS47873.1| inner membrane protein, 60 kDa [marine gamma proteobacterium HTCC2207] Length = 560 Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 117/397 (29%), Positives = 207/397 (52%), Gaps = 33/397 (8%) Query: 162 NANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQE 218 N N + + S Y+ + + N+ + + G+I R H+P ++ G+Q Sbjct: 177 NQNGVRLVKRFSFSRSGYVIGVSYLINNSGYEPWEATFYGQIKRDSHEPLVESSG-GIQP 235 Query: 219 GFIAVL--GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 A L DK+ + +SDI+ ++ + E W+ + Y+ S +IP + + + Sbjct: 236 YLGAALREADKNFAKHDFSDIQDETVKSSIEGG-WVAMVQHYFVSAWIPPGDQKNNFSLR 294 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 LS G Y F+ +I + G + G K+ + + L ++ +D+ Sbjct: 295 KLS-GQDVYLMGFTGEKINVASGSYGEYMAQFYVGPKDQAKLEELAEYL-----DLTVDY 348 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G+ + +AKP+F M + + +VGN+G +I+L T+ +K+L +PL+ S A M+++QPK+ Sbjct: 349 GFLWMLAKPIFAAMKFIHEVVGNWGWSIILLTIGIKILLYPLSAASLRSMAKMRSLQPKM 408 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 + L+E + Q + + ++ LYK +NP GC+P+LLQ+PVF A+Y V+ S+E+RH+ Sbjct: 409 ERLKETYGDDR-QKMSQELMGLYKKEKVNPAGGCFPMLLQMPVFLALYWVLLESVEIRHS 467 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ WI DL+A DP I P++M SM + K+ P P D Q Sbjct: 468 PWIFWIDDLSAKDPYFIL-------------------PLVMGASMLLMQKLQPMPTDPTQ 508 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 AM++ MP+ F F FP+GL++YW+ +N++S+ QQ Sbjct: 509 AMVMKIMPIAFTFFFMIFPSGLVLYWTVNNLLSMFQQ 545 >gi|218885990|ref|YP_002435311.1| hypothetical protein DvMF_0888 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|259515682|sp|B8DP11|OXAA_DESVM RecName: Full=Inner membrane protein oxaA gi|218756944|gb|ACL07843.1| 60 kDa inner membrane insertion protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 539 Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 120/342 (35%), Positives = 183/342 (53%), Gaps = 39/342 (11%) Query: 221 IAVLGDKSLVEQ-KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 +A L D S E+ SD+EK + + SW + Y+ P T + K L Sbjct: 221 VAWLHDGSFSEKTSASDLEKGVLET--GALSWGAVMSNYFLVAAAPVDTTGVTLKGK-LQ 277 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 +G Y+ +++I G T + G K+ + LA I+ GWF Sbjct: 278 EG--VYRVAMERGDVSIPAGGETTVACNYWFGPKDRGLLKEAPNQLA-----EAINLGWF 330 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 IA+P+ ++ +F+ VGN+G+AI+L TV +KL+F+PL+ K Y S MK +QP + +L Sbjct: 331 SIIARPLVDMLEFFHKYVGNYGVAIILLTVVIKLVFWPLSHKSYKSMEQMKKLQPMLQKL 390 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 REK + + + M++LYKT+ +NP GC P+L+QIPVFF +Y+ + ++E+RHA F Sbjct: 391 REKHGDDREK-MNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHASFI 449 Query: 460 G--------WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 W+ DL+A D P+Y I PI+M +M +Q K++P P Sbjct: 450 THLPFTDMVWLADLSAKD-----------PYY--------ITPIVMGATMLLQQKLTPAP 490 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 D QA I+ +MPVVF F SFP+GL++YW +NV+SI QQ Sbjct: 491 GDPTQAKIMMFMPVVFTFMFLSFPSGLVVYWLCNNVLSIAQQ 532 >gi|254490319|ref|ZP_05103508.1| 60Kd inner membrane protein [Methylophaga thiooxidans DMS010] gi|224464452|gb|EEF80712.1| 60Kd inner membrane protein [Methylophaga thiooxydans DMS010] Length = 546 Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 155/576 (26%), Positives = 259/576 (44%), Gaps = 51/576 (8%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP-----NQVDNSYAAVL 57 R + F + +S+++ AWQN YV P+ + T + P + ++ A L Sbjct: 5 RTFFIFGLLIVSLLLWEAWQNDYVRPQQAADVASQTQTTTPQAPVSDELPDMPSASAESL 64 Query: 58 ID--DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 D Q + S +V +K + I +G DL L Y + V L+ S Sbjct: 65 PDVPQSQQVSASSGKVHVKTDVMDLHIATQGGDIRDLALLEYAVSSEQPDTPVQFLNDSA 124 Query: 116 -----TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 T++ A+ D + + + + V ++ P L +++ + + + Sbjct: 125 GQFFVTQSGLRADGDAPTHYEHYQAEQTEYVLQAGQDELKIP-----LYWQSESGLQVVK 179 Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 T + + Y+ + V NNS + P ++ R++ + G + Sbjct: 180 TYNFKRDSYVVNVDYQVINNSGETFSAYPYAQLNRNRSDDDSMFIYTYTGAVFSSKGNEY 239 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP---SKETSFHSQFKYLSDGHARYQ 286 + + D++ + S + W + Y+ + IP S++ F+ + S Y Sbjct: 240 EKVDFDDLDDKAFSR-SSIDGWAAMIQHYFVAAIIPPQASEQLGFYGK----SINGTNYT 294 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 A I+ G+ T L+ G K+ H D + +D+G I++P+ Sbjct: 295 AGVRMPAISASSGEQAATQYQLYLGPKK-----HERLDKVAENLPLTVDYGILTIISEPL 349 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F +M + + L GN+G +I+L TV +KL FF L+ Y S A M+ + PK+ L+E++ Sbjct: 350 FWIMEWLHKLTGNWGWSIILLTVLIKLAFFKLSATSYRSMAAMRKLTPKLATLKERYGDD 409 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q +AM+ LY+T INPL GC PIL+Q+PVF A Y V+ S+E+R A F WI DL Sbjct: 410 K-QKFNQAMMDLYRTEKINPLGGCLPILVQMPVFLAFYWVLVESIELRQADFMLWINDLT 468 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 A DP I P++ LSM+ Q K++P P D QAM++ P+V Sbjct: 469 AMDPYFIL-------------------PVLFGLSMWFQQKLNPAPQDPAQAMMMKIFPLV 509 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F + FPAGL++YW +NV+SI QQ I + GA Sbjct: 510 FTVFFAFFPAGLVLYWVVNNVLSIAQQWYITRKMGA 545 >gi|24371604|ref|NP_715646.1| inner membrane protein, 60 kDa [Shewanella oneidensis MR-1] gi|38503016|sp|Q8EKT6|OXAA_SHEON RecName: Full=Inner membrane protein oxaA gi|24345354|gb|AAN53091.1|AE015452_4 inner membrane protein, 60 kDa [Shewanella oneidensis MR-1] Length = 541 Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 145/500 (29%), Positives = 240/500 (48%), Gaps = 50/500 (10%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN-AYFAELDYV-- 127 + +K L IN G L + L+ + P V L TK+ Y A+ + Sbjct: 68 ITVKTDQLDVQINPVGGDIVYAALVSHKLEQGKDQPFVLL---EQTKDFTYIAQSGLIGR 124 Query: 128 -----STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 S S T + L G+ + + L + N + + + Sbjct: 125 DGIDSSAKGRAIFAASKTEFTLADGQ---DSLEVPLTYVAENGVTYTKVFVFHRGKFNVN 181 Query: 183 VD-TVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIE 238 +D + N S ++ G+I + KP ++ G A S+ +KY+ D+ Sbjct: 182 IDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRG--AAFSTASVRYEKYNFEDMG 239 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 K+++ N W + Y+ S +IP S ++ F +S G F + P Sbjct: 240 KNNL-NQPTIGGWAAMLQHYFVSAWIPPATDS-NTIFSSVSAG-GLANIGFRGAVYDVAP 296 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G + ++ + G K+ + L +++D+G+ +++A P+ L+ ++ + VG Sbjct: 297 GATQEISSQFYVGPKDQKALSALSDTL-----NLVVDYGFLWWLAVPIHWLLMFYQSFVG 351 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + +AM++L Sbjct: 352 NWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGDDR-QKMGQAMMEL 410 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ D Sbjct: 411 YKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQD--------- 461 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPA 536 P+Y I P++M +SMFI KM P P D Q ++ WMPV+F FP+ Sbjct: 462 --PYY--------ILPLLMGVSMFIMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLWFPS 511 Query: 537 GLIIYWSWSNVISIVQQAVI 556 GL++YW N+++I+QQ +I Sbjct: 512 GLVLYWLVGNIVAIIQQKII 531 >gi|261341634|ref|ZP_05969492.1| hypothetical protein ENTCAN_08100 [Enterobacter cancerogenus ATCC 35316] gi|288315989|gb|EFC54927.1| membrane protein insertase, YidC/Oxa1 family [Enterobacter cancerogenus ATCC 35316] Length = 547 Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 120/413 (29%), Positives = 215/413 (52%), Gaps = 38/413 (9%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQ 208 I + + +A F +T +L Y + +V N + S G++ + H+ Sbjct: 148 IPMTYTDAAGNTFTKTFTLKRGEYAVNVGYSVQNAGEKPLELSTFGQLKQSINLPSHR-D 206 Query: 209 TATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 T ++ F + G D + K+ I + N W+ + +Y+A+ ++P+ Sbjct: 207 TGSSNFALHTFRGAAYSTPDTKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWVPN 266 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + + F + G+ + + + + PG++ + L+ G P I +A Sbjct: 267 NDGT--NNFYTANLGNGIAAIGYKSQPVLVQPGQTGKLASTLWVG----PEIQDKMAAVA 320 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S Sbjct: 321 -PHLDLTVDYGWLWFISQPLFKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSM 379 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+L+Q+P+F A+Y + Sbjct: 380 AKMRMLQPKIAAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYM 438 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + S+E+RHAPF WI DL+A D P+Y I PI+M ++MF K Sbjct: 439 LMGSVELRHAPFALWIHDLSAQD-----------PYY--------ILPILMGVTMFFIQK 479 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 480 MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 532 >gi|283787595|ref|YP_003367460.1| inner membrane protein [Citrobacter rodentium ICC168] gi|282951049|emb|CBG90727.1| inner membrane protein [Citrobacter rodentium ICC168] Length = 547 Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 119/413 (28%), Positives = 216/413 (52%), Gaps = 38/413 (9%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQ 208 + + + +A F +T L Y + V N + S G++ + H+ Sbjct: 149 VPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVLNAGAKPLEISTFGQLKQSINLPSHR-D 207 Query: 209 TATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 T ++ F + G D+ + K+ I + N + + W+ + +Y+A+ ++P Sbjct: 208 TGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNVNANGGWVAMLQQYFATAWVPR 267 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + + F + G+ + + + + PG++ T+ L+ G P I +A Sbjct: 268 NDGT--NNFYTANLGNGVAAIGYKSQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA 321 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + ++ +GN+G +I++ T V+ + +PL K QY S Sbjct: 322 -PHLDLTVDYGWLWFISQPLFKLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSM 380 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F A+Y + Sbjct: 381 AKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYM 439 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + S+E+RHAPF WI DL+A D P+Y I PI+M ++MF K Sbjct: 440 LMGSIELRHAPFALWIHDLSAQD-----------PYY--------ILPILMGVTMFFIQK 480 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 481 MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|156972771|ref|YP_001443678.1| putative inner membrane protein translocase component YidC [Vibrio harveyi ATCC BAA-1116] gi|166977424|sp|A7N0X9|OXAA_VIBHB RecName: Full=Inner membrane protein oxaA gi|156524365|gb|ABU69451.1| hypothetical protein VIBHAR_00436 [Vibrio harveyi ATCC BAA-1116] Length = 540 Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 146/491 (29%), Positives = 236/491 (48%), Gaps = 49/491 (9%) Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 SI+ G +L Y ++ S+ P V L +TK F + I+L ++N Sbjct: 76 SIDTVGGDVVHADLNKYSAELDSSDPFVLL---KDTKGHQFIAQSGLVGPQGIDLSSTNR 132 Query: 141 VWNLISGKILT-----PTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQI 194 +S T + + F AN I + +T Y + V NNS + Sbjct: 133 PHYKVSADSFTLADGQDELRVPMTF-TANGIEYIKTYVFKRGSYALNVEYDVVNNSGNNA 191 Query: 195 RFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEKSSIS-NFHESNSW 251 F +R A + + + + +KYS D++ ++S N + W Sbjct: 192 TFGMYAH-LRQNLMDAGGSITMPTYRGGAYSTEDVRYKKYSFEDMQDRNLSINLADGQGW 250 Query: 252 LGISDKYWASVFIPSKE--TSFHSQ-FKYLSDGHARYQAKFSANEITILPGKSITTTNFL 308 + Y+A+ +IP E T+ +++ L D R K TI G L Sbjct: 251 AAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGDIGVRMPNK------TIATGDQAKFEATL 304 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + G K E ++++D+GW +FIAKP+ L+++ + VGN+G+AI+ T Sbjct: 305 WVGPK-----LQNEMAAVAENLDLVVDYGWLWFIAKPLHSLLAFIQSFVGNWGVAIICLT 359 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 V+ +PL K QY S A M+ +QPK+ +RE+ Q + + M++LYK +NPL Sbjct: 360 FIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDR-QRMSQEMMELYKKEKVNPLG 418 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A D P+Y Sbjct: 419 GCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQD-----------PYY----- 462 Query: 489 HVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 I P++M SMF+ KMSP D Q I+ +MPV+F F FP+GL++YW SN+ Sbjct: 463 ---ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNI 519 Query: 548 ISIVQQAVIMK 558 ++++QQ +I K Sbjct: 520 VTLIQQTLIYK 530 >gi|124269009|ref|YP_001023013.1| protein translocase subunit yidC [Methylibium petroleiphilum PM1] gi|124261784|gb|ABM96778.1| protein translocase subunit yidC [Methylibium petroleiphilum PM1] Length = 553 Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 140/455 (30%), Positives = 226/455 (49%), Gaps = 42/455 (9%) Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIKLVFKN--ANNILFERTI 172 + Y A+ V +LPN T + L+ G+ + +++VF++ + +T+ Sbjct: 129 ERVYLAQTGLVGAP---DLPNHLTAYTLVPGETSLAAGKDALEVVFESPEQGGVKLRKTL 185 Query: 173 SLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAVLGDKSL 229 +L +Y ++ V N + +++R + P ++ + G + Sbjct: 186 TLQRGNYAVQVRHDVVNTGTAALSPQLYVQLVRDGNAPPGESSFYSTFTGPVVYTDASKF 245 Query: 230 VEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + IEK + + + N W+ + Y+ S ++ + + + + Sbjct: 246 HKVDFKSIEKGNTEHDKTADNGWVAMVQHYFFSAWLHNDKAPREFYTRKIDVNLYAVGQL 305 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI--PRFEMLIDWGWFYFIAKPM 346 F EI PG S + LF G +E EK L P E++ D+GWF IAKP+ Sbjct: 306 FPLGEIA--PGASKQFDSVLFVGPQE-------EKKLETLAPGLELVKDYGWFTIIAKPL 356 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + L+GN+G AI+ V +K F+ L K Y S A MK I PKI E+RE+ K Sbjct: 357 FWLLDQLHKLIGNWGWAIVALVVLLKAAFYWLNAKAYASMAKMKAINPKIMEMRERLKDK 416 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 P Q +Q+ M+++YK +NPL GC PIL+Q+PVF A+Y V+ S+EMR+AP+ GWI DL+ Sbjct: 417 PQQ-MQQEMMRIYKEEKVNPLGGCLPILVQMPVFIALYWVLLSSVEMRNAPWLGWITDLS 475 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP LF I PI+M+ + +Q ++P P D QA ++ MP+V Sbjct: 476 VRDP-----LF--------------ILPIVMTGTTLLQTWLNPTPPDPMQAKMMWIMPLV 516 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F FPAGL++YW +N++SI QQ VI + G Sbjct: 517 FSVMFFFFPAGLVLYWITNNLLSIAQQWVINRRLG 551 >gi|157144347|ref|YP_001451666.1| putative inner membrane protein translocase component YidC [Citrobacter koseri ATCC BAA-895] gi|166975859|sp|A8ACL7|OXAA_CITK8 RecName: Full=Inner membrane protein oxaA gi|157081552|gb|ABV11230.1| hypothetical protein CKO_00051 [Citrobacter koseri ATCC BAA-895] Length = 548 Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 107/334 (32%), Positives = 188/334 (56%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N + W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSNGGWVAMLQQYFATAWIPRNDGT--NNFYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ T+ L+ G P I +A P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 D-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|307547061|ref|YP_003899540.1| preprotein translocase subunit YidC [Halomonas elongata DSM 2581] gi|307219085|emb|CBV44355.1| K03217 preprotein translocase YidC subunit [Halomonas elongata DSM 2581] Length = 566 Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 121/370 (32%), Positives = 191/370 (51%), Gaps = 35/370 (9%) Query: 200 GRIMRHKPQTATNTFGVQEGFIAVLGDK-SLVEQKY-----SDIEKSSISNFHESNSWLG 253 G+++R ++ + G + G + LG S E +Y DI N W+ Sbjct: 216 GQLVRDN--SSDPSSGPKMGMRSFLGAAFSTPEDRYLKVDFDDIRDGKFENRDVEGGWVA 273 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 + Y+ S + P ++ + F +D R A F+ T+ T L+ G Sbjct: 274 MIQHYFTSAWAPPQDQ--KNLFYTATDSQNRNVAAFAGPTRTLGAESKATLAATLYVG-- 329 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 P I + +A P E+ +D+GW +FIA P+F L+ + +++GN+G +I++ T+ VK Sbjct: 330 --PKIQDRLEAVA-PNLELTVDFGWLWFIANPLFWLLDHIQDVIGNWGWSIVILTLLVKT 386 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 PL+ K Y S A M+ + P++ L+E++ Q + + M++ Y+ INPL GC PI Sbjct: 387 ALLPLSAKAYKSMARMRKLGPEMQRLKEQYGDD-RQKMSQEMMKFYQKEKINPLGGCLPI 445 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 ++Q+PVF A+Y ++ S+E+RHAPF WI DL+ DP F L Sbjct: 446 VVQMPVFIALYWMLLESVELRHAPFMFWITDLSVKDP--YFVL----------------- 486 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 PI+M SMF+Q ++P P D QA I+ +PVVF F FPAGL+IYW +N+ SI QQ Sbjct: 487 PILMGASMFVQQLLNPTPPDPTQAKIMKLLPVVFTFFFLWFPAGLVIYWVVNNITSIAQQ 546 Query: 554 AVIMKMHGAE 563 I + A+ Sbjct: 547 YFITRKVEAD 556 >gi|238783045|ref|ZP_04627072.1| Inner membrane protein oxaA [Yersinia bercovieri ATCC 43970] gi|238716046|gb|EEQ08031.1| Inner membrane protein oxaA [Yersinia bercovieri ATCC 43970] Length = 398 Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 123/411 (29%), Positives = 210/411 (51%), Gaps = 39/411 (9%) Query: 158 LVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIM------RHKPQTA 210 + F + +F +T L + Y + V N S + + G++ +H+ T Sbjct: 1 MTFTGKDGSVFTKTFVLKRNDYAIGVDYHVKNASDAPLELTLFGQLKQSINLPKHR-DTG 59 Query: 211 TNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 +N F + G D + +SDIE S+ + W+ + +Y+A+ +IP+ Sbjct: 60 SNNFALHTYRGAAYSSDDTKYKKYSFSDIEDKSL-DITTKGGWVAMLQQYFATAWIPAAN 118 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + + F G+ F + I PG+ L+ G P I +A P Sbjct: 119 ET--NTFYSADLGNGLAAIGFKGMPVVIQPGEQKQLGATLWVG----PEIQDKMAAIA-P 171 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 ++ +D+GW +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A Sbjct: 172 HLDLTVDYGWLWFISQPLFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAK 231 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QPK+ +RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ Sbjct: 232 MRLLQPKLAAMRERIGDD-KQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLM 290 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S+E+RHAPF WI DL+A DP I PI+M ++M+ KMS Sbjct: 291 SSVELRHAPFILWIHDLSAQDPYYIL-------------------PILMGITMYFIQKMS 331 Query: 509 PPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P D Q I+ +MPV+F FPAGL++Y+ SN+++I+QQ +I + Sbjct: 332 PTTVTDPMQQKIMTFMPVIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 382 >gi|261213269|ref|ZP_05927551.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC341] gi|260837543|gb|EEX64246.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC341] Length = 541 Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 130/410 (31%), Positives = 206/410 (50%), Gaps = 50/410 (12%) Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 AN I + +T L Y +V V NNS + + ++ + N G Sbjct: 159 QANGIDYTKTFILKRGSYAVDVVFDVANNSGNPATLGMYAHLRQNLLDSGGNLAMPTYRG 218 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 D + + D++ ++S ++ + +W + Y+AS +IP E Sbjct: 219 GAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWAAMIQHYFASAWIPRNEP--------- 269 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAK--EF-------PTIHHYEKDLAIPR 329 QA+ + I+ L I T N A EF P + +A P Sbjct: 270 -------QAQLYSRVISNLGDIGIRTPNKTIANGDKAEFEATLWVGPKLQDKMAAVA-PN 321 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 ++++D+GW +FIAKP+ L+S + VGN+G+AI+ T V+ +PL K QY S A M Sbjct: 322 LDLVVDYGWLWFIAKPLHWLLSVIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKM 381 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ +RE+ Q + + M++LYK +NPL GC PI+LQ+P+F A+Y + Sbjct: 382 RMLQPKLQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPIVLQMPIFIALYWALME 440 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+E+RH+PF+GWI DL+A D P+Y I P++M SMF+ KMSP Sbjct: 441 SVELRHSPFFGWIHDLSAQD-----------PYY--------ILPLLMGASMFVIQKMSP 481 Query: 510 PP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 482 TTVTDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531 >gi|197333980|ref|YP_002154775.1| inner membrane protein OxaA [Vibrio fischeri MJ11] gi|197315470|gb|ACH64917.1| inner membrane protein OxaA [Vibrio fischeri MJ11] Length = 541 Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 115/334 (34%), Positives = 184/334 (55%), Gaps = 38/334 (11%) Query: 232 QKYS--DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD-GHARYQA 287 +KYS D+E ++S + W G+ Y+AS +IP + D G+ + Sbjct: 229 KKYSFDDMEDKNLSIDMTNGQGWAGMLQHYFASAWIPRNVNDAKLTSRVAGDYGYIGVRM 288 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI--PRFEMLIDWGWFYFIAKP 345 +TI G+ T + L+ G K +K++A P ++ +D+GW +FIA P Sbjct: 289 P----SVTIPAGQEATLSATLWTGPK-------LQKEMAATAPYLDLTVDYGWLWFIASP 337 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + L+S+ +V N+G+AI++ T V+ +PL K QY S A M+ +QPK+ +RE+ Sbjct: 338 LHKLLSFIQGIVVNWGLAIIVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGD 397 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M++LYK +NPL GC PILLQ+P+F ++Y + S+E+RH PF+GWI DL Sbjct: 398 DR-QRMSQEMMELYKKEKVNPLGGCLPILLQMPIFISLYWALMESVELRHTPFFGWITDL 456 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I P++M SMF+ KMSP D Q I+ +MP Sbjct: 457 SAQD-----------PYY--------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMP 497 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++YW SN+++++QQ +I + Sbjct: 498 VMFTVFFLWFPSGLVLYWLVSNIVTLIQQTLIYR 531 >gi|59710610|ref|YP_203386.1| putative inner membrane protein translocase component YidC [Vibrio fischeri ES114] gi|59478711|gb|AAW84498.1| cytoplasmic insertase into membrane protein, Sec system [Vibrio fischeri ES114] Length = 541 Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 115/334 (34%), Positives = 184/334 (55%), Gaps = 38/334 (11%) Query: 232 QKYS--DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD-GHARYQA 287 +KYS D+E ++S + W G+ Y+AS +IP + D G+ + Sbjct: 229 KKYSFDDMEDKNLSIDMTNGQGWAGMLQHYFASAWIPRNVNDAKLTSRVAGDYGYIGVRM 288 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI--PRFEMLIDWGWFYFIAKP 345 +TI G+ T + L+ G K +K++A P ++ +D+GW +FIA P Sbjct: 289 P----SVTIPAGQEATLSATLWTGPK-------LQKEMAATAPYLDLTVDYGWLWFIASP 337 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + L+S+ +V N+G+AI++ T V+ +PL K QY S A M+ +QPK+ +RE+ Sbjct: 338 LHKLLSFIQGIVVNWGLAIIVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGD 397 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M++LYK +NPL GC PILLQ+P+F ++Y + S+E+RH PF+GWI DL Sbjct: 398 DR-QRMSQEMMELYKKEKVNPLGGCLPILLQMPIFISLYWALMESVELRHTPFFGWITDL 456 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I P++M SMF+ KMSP D Q I+ +MP Sbjct: 457 SAQD-----------PYY--------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMP 497 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++YW SN+++++QQ +I + Sbjct: 498 VMFTVFFLWFPSGLVLYWLVSNIVTLIQQTLIYR 531 >gi|288942814|ref|YP_003445054.1| membrane protein insertase, YidC/Oxa1 family domain-containing [Allochromatium vinosum DSM 180] gi|288898186|gb|ADC64022.1| membrane protein insertase, YidC/Oxa1 family domain containing [Allochromatium vinosum DSM 180] Length = 554 Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 190/332 (57%), Gaps = 31/332 (9%) Query: 231 EQKYSDIEKSSIS----NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 E+KY + I+ + ++ W+ + Y+ + ++P + + F + +RY Sbjct: 239 EEKYKKVSLEDIAKGKLDLTVTDGWIAMMQHYFLAAWVPPRAVA--ETFYTNALNGSRYI 296 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + ++I G + N LF G K T+ +D+A P E+ +D+GW IAKP+ Sbjct: 297 IGKYSPPVSIASGATHAFENQLFVGPKLLSTL----EDIA-PGLELAVDYGWLTVIAKPI 351 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 + ++S+ + +VGN+G AI++ T+ +KL F+ L++ Y S A+M+ I P++ L++++ Sbjct: 352 YWMLSWIHAVVGNWGWAIIVLTILIKLAFYKLSETSYRSMAHMRQITPRLQALKDRYGDD 411 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q L +AM++LYKT INPL GC PIL+QIPVF A+Y V+ S+EMR APF W+ +L+ Sbjct: 412 K-QRLNQAMMELYKTEKINPLGGCLPILVQIPVFIALYWVLLESVEMRQAPFVLWLNNLS 470 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 A DP I P+IM +SMF+Q K++P P D QA I+ +P V Sbjct: 471 APDPYFIL-------------------PLIMGVSMFVQQKLNPAPPDPLQAKIMMSLPFV 511 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F + FP+GL++YW+ +N++SI QQ I + Sbjct: 512 FTVFFAFFPSGLVLYWTVNNLLSIAQQWKITR 543 >gi|315634811|ref|ZP_07890093.1| YidC/Oxa1 family membrane protein insertase [Aggregatibacter segnis ATCC 33393] gi|315476363|gb|EFU67113.1| YidC/Oxa1 family membrane protein insertase [Aggregatibacter segnis ATCC 33393] Length = 542 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 167/571 (29%), Positives = 276/571 (48%), Gaps = 81/571 (14%) Query: 13 LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVE 72 +S I+ WQ Y P+ + E+ T P N+ + D + + + Sbjct: 15 MSFIVYQQWQLDYHTPK--PVATEQTVTSTSDVPASSGNN-TVIATDTQVKG----KVIT 67 Query: 73 LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT-KNAYFAE-------- 123 L+N IN G L Y ++ SN P V L NT ++ Y A+ Sbjct: 68 LENDVFRLKINTLGGDVISSELLKYDAELDSNMPFVLL---QNTPEHVYIAQSGLIGKDG 124 Query: 124 -------LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 DY N +L + +++ P LV++ + + + L Sbjct: 125 IDTKAGRADYQVEGENFKLADGQN-------ELIVP-----LVYQK-EGVTYRKIFVLKR 171 Query: 177 -HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + ++N S I P G+ +RH ++ + + +KYS Sbjct: 172 GEYDIAVNYEISNQSDKTIEVEPYGQ-LRHTLVDSSGSVAMPTYTGGAYSSSETNYKKYS 230 Query: 236 --DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD-----GHARYQAK 288 D+E +++S + W+ + Y+ S +IP+++ +Q L+D G Y+ Sbjct: 231 FSDMENANLS-VNTKAGWVAVLQHYFVSAWIPNQDAD--NQLYTLTDKANNIGSIGYRGP 287 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + I P + T+ L+ G P + + +A ++ +D+GW +FIAKP+F Sbjct: 288 V----VAIQPNTTEKLTSKLWTG----PKLQNEMAQVA-DHLDLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ LV N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F + Sbjct: 339 LLTFIQQLVHNWGVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERFGED-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC P+LLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKDEKVNPLGGCLPLLLQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 D P+Y I PI+M SMF+ KMSP P AD Q I+N+MP++F Sbjct: 458 D-----------PYY--------ILPILMGASMFLLQKMSPTPVADPMQQKIMNFMPLIF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FPAGL++YW SN+I+I+QQ +I + Sbjct: 499 MVFFLWFPAGLVLYWLVSNLITIIQQQLIYR 529 >gi|56461737|ref|YP_157018.1| preprotein translocase subunit YidC [Idiomarina loihiensis L2TR] gi|56180747|gb|AAV83469.1| Preprotein translocase subunit YidC [Idiomarina loihiensis L2TR] Length = 530 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 109/316 (34%), Positives = 176/316 (55%), Gaps = 28/316 (8%) Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N W+G+ + Y+ S ++P + + + A + +I PG S T Sbjct: 229 NVTSQTGWVGMLEHYFVSAWVPKQGQQNRLYSRVANGSQAIIGVIYPMTDIQ--PGSSKT 286 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + +F G K+ + + ++ +D+G+ +++A+P+F L+ + ++V N+G+A Sbjct: 287 IESQVFLGPKDQDAMAE-----VVEYLDLTVDYGFLWWLAQPIFKLLQFLQSIVINWGLA 341 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+LTTV VK L FPL K QYVS A M+ +QPK+ LRE++ Q + AM++LYK Sbjct: 342 IILTTVIVKALLFPLTKAQYVSMAKMRMLQPKMTALRERYGDD-RQKMSGAMMKLYKEEK 400 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC P+LLQ+P+F A+Y V+ S+E+RH+ F WI+DL+ D P+Y Sbjct: 401 VNPLGGCLPMLLQLPIFLALYWVLLESVELRHSAFVFWIQDLSTKD-----------PYY 449 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M SMF+ ++ P P AD Q + +MPV+F FP+GL++YW Sbjct: 450 --------ILPILMGASMFLMQRLQPTPTADPMQQKLFQYMPVIFTVFFLWFPSGLVLYW 501 Query: 543 SWSNVISIVQQAVIMK 558 SN+I+I Q +I + Sbjct: 502 LVSNLITIAQMLIIYR 517 >gi|260774544|ref|ZP_05883457.1| OxaI/YidC membrane insertion protein [Vibrio metschnikovii CIP 69.14] gi|260610450|gb|EEX35656.1| OxaI/YidC membrane insertion protein [Vibrio metschnikovii CIP 69.14] Length = 540 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 118/332 (35%), Positives = 185/332 (55%), Gaps = 40/332 (12%) Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKE--TSFHSQ-FKYLSDGHARYQAKF 289 + D++ ++S W + Y+AS +IP E T+ +S+ + D R K Sbjct: 232 FKDMQDRNLSLPLPNGQGWAAMIQHYFASAWIPRNEPGTNLYSRVIGNVGDIGVRMPNK- 290 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI--PRFEMLIDWGWFYFIAKPMF 347 TI G + T L+ G K + D+A P ++++D+GW +FIAKP+ Sbjct: 291 -----TIADGDATQFTATLWVGPK-------LQNDMAATAPNLDLVVDYGWLWFIAKPLH 338 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+S+ + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Sbjct: 339 TLLSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD- 397 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A Sbjct: 398 RQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSA 457 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 D P+Y I P++M SMF+ KMSP D Q I+ +MPV+ Sbjct: 458 QD-----------PYY--------ILPLLMGASMFLIQKMSPNTITDPMQQKIMTFMPVM 498 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F F FP+GL++YW SN+++++QQ +I + Sbjct: 499 FTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYR 530 >gi|213580793|ref|ZP_03362619.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 317 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 107/327 (32%), Positives = 182/327 (55%), Gaps = 28/327 (8%) Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 K+ I + N W+ + +Y+A+ +IP + + + F + G+ + A Sbjct: 3 KFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGT--NNFYTANLGNGIVAIGYKAQ 60 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + + PG++ T+ L+ G P I +A P ++ +D+GW +FI++P+F L+ + Sbjct: 61 PVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQPLFKLLKW 115 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Q Sbjct: 116 IHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD-KQRQS 174 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP Sbjct: 175 QEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSAQDPYY 234 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 235 IL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFF 275 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 276 LWFPSGLVLYYIVSNLVTIIQQQLIYR 302 >gi|260771041|ref|ZP_05879969.1| OxaI/YidC membrane insertion protein [Vibrio furnissii CIP 102972] gi|260613930|gb|EEX39121.1| OxaI/YidC membrane insertion protein [Vibrio furnissii CIP 102972] gi|315178632|gb|ADT85546.1| hypothetical inner membrane protein translocase component YidC [Vibrio furnissii NCTC 11218] Length = 540 Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 146/493 (29%), Positives = 234/493 (47%), Gaps = 53/493 (10%) Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 SI+ G L Y ++ S +P V L NT+ F + I+L ++N Sbjct: 76 SIDTVGGDVVTAKLNQYSDELDSENPFVLL---KNTQGHQFIAQSGLIGPQGIDLSSNNR 132 Query: 141 VWNLISGKILT-----PTTPIKLVFKNANNILFERTISLDE-----HYLFKIVDTVTNNS 190 + T I + ++ AN + + +T L F +V+ NN+ Sbjct: 133 PTYTVDADSFTLADGQDELRIPMTYQ-ANGLEYTKTFVLKRGNYAVDVEFNVVNHSGNNA 191 Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESN 249 + R ++ A T+ G D + + D++ +++ N Sbjct: 192 TLGMYAHLRQNLLDSGGSLAMPTY---RGGAYSTEDTRYKKYSFDDMQDRNLAMNLANGQ 248 Query: 250 SWLGISDKYWASVFIPSKE--TSFHSQ-FKYLSDGHARYQAKFSANEITILPGKSITTTN 306 W + Y+AS +IP E T+ +S+ L D R K TI G+ Sbjct: 249 GWAAMIQHYFASAWIPRNEPGTNLYSRVIGNLGDIGVRMPNK------TIADGQQADFKA 302 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 L+ G K + P ++++D+GW +FIAKP+ L+S + VGN+G+AI+ Sbjct: 303 TLWVGPK-----LQDQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQSFVGNWGVAIIC 357 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + M++LYKT +NP Sbjct: 358 LTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDR-QRMSQEMMELYKTEKVNP 416 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 L GC PI LQ+P+F ++Y + S+E+RH+PF+GWI DL+A D P+Y Sbjct: 417 LGGCLPIFLQMPIFISLYWALMESVELRHSPFFGWIHDLSAQD-----------PYY--- 462 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 I P++M SMF KMSP D Q I+ +MPV+F F FP+GL++YW S Sbjct: 463 -----ILPLLMGASMFFIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVS 517 Query: 546 NVISIVQQAVIMK 558 N+++++QQ +I K Sbjct: 518 NIVTLIQQTLIYK 530 >gi|88811304|ref|ZP_01126560.1| 60 kDa inner membrane insertion protein [Nitrococcus mobilis Nb-231] gi|88791843|gb|EAR22954.1| 60 kDa inner membrane insertion protein [Nitrococcus mobilis Nb-231] Length = 548 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 158/572 (27%), Positives = 261/572 (45%), Gaps = 59/572 (10%) Query: 4 NWNYFVAIALSVIIVY---AWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 N F+ +AL ++ AWQ Y PR + + +Q Q D + + Sbjct: 3 NQRLFLFLALGAVLFLLWDAWQQDY-GPRPPTPQSTEQAVQA----PQADGPAEELPTEL 57 Query: 61 RAQA--LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS---PSN 115 R QA + R+ + IN G L + +P L P Sbjct: 58 RQQAGLAAQGMRISVVTDLFAIEINTVGGGIGSAKLLKHATSTDDPAPFTLLRDQGKPLF 117 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVFKNANNI-LFERTI 172 A + + + + L SG +++ P LV+ N I + R I Sbjct: 118 VVQAGLRAKEGSAPGTQARFQSRQKAYQLASGEQQLVVP-----LVWHGPNGITVTRRYI 172 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG------D 226 Y I V N S +++R + N G G +A +G D Sbjct: 173 FQRGKYTIDIEQEVQNASAAPWSAYQYTQLLRGE----ENKTGGLAGQVAYIGGAIYSPD 228 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + + ++++ ++ + N W+ + Y+ + +P + +F G + Sbjct: 229 DKYQKISFDEMQEQALDRTVQ-NGWVAMVQHYFLAAMVPPR--GMTERFYSRIVGGDLFS 285 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 S+ TI PG+S T L+ G K+ + L E+ +D+G F IAKPM Sbjct: 286 LGMSSPWQTIQPGQSGTFQTQLYLGPKDQERMASVASGL-----ELTVDYGIFTIIAKPM 340 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F+++S+F+ +VGN+G AI+ TV +K +FF L++ Y S A M+ +QP++ +L+E+F Sbjct: 341 FVVLSWFHAVVGNWGWAIVFLTVLIKAVFFKLSETSYRSMARMRKLQPRMQQLKEQFGDD 400 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + + ++ LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF W++DL+ Sbjct: 401 -RQRMNQELMTLYKREKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFILWLRDLS 459 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 A D P+Y + PIIM L+M Q +++P P D Q I+ +MPVV Sbjct: 460 APD-----------PYY--------VLPIIMGLTMLAQQRLNPAPMDPIQQKIMLFMPVV 500 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP GL++Y++ +N +SI+QQ +I + Sbjct: 501 FTGFFLFFPGGLVLYYTVNNSLSILQQWLITR 532 >gi|117617478|ref|YP_858698.1| membrane protein OxaA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166975847|sp|A0KQZ7|OXAA_AERHH RecName: Full=Inner membrane protein oxaA gi|117558885|gb|ABK35833.1| membrane protein OxaA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 548 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 146/521 (28%), Positives = 249/521 (47%), Gaps = 58/521 (11%) Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + ++A A + + + + L +++ +G +L + L+ + P V L S + Sbjct: 55 VSEQANANTARKLITVSSDVLKLTLDTQGGDIVSADLLAHKLEEGKDQPFVLLTS--QPE 112 Query: 118 NAYFAELDYVS-------TANNIELPNSNTVWNLISGK--ILTPTTPIKLVFKNANNILF 168 + Y A+ V + T + L G+ ++ P T + ++ ++F Sbjct: 113 HLYVAQSGLVGRNGPDSQAQGRPTYEAAQTSYQLADGQDQVVVPMT-----WTDSKGVVF 167 Query: 169 ERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL--- 224 + L Y + + N S + ++ G++ QT T T Q+G V Sbjct: 168 TKEFVLKRGDYAVGVDYKIDNKSAEPVQVQFYGQL----KQTVT-TPKDQQGHAMVASAY 222 Query: 225 --GDKSLVEQKYS----DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G S + +Y D K + N W+ + Y+ S + P+ + + +S + + Sbjct: 223 RGGAFSSEDTRYKKYTFDEMKDADLNKTTKGGWVAMLQHYFVSAWAPNADDT-NSFYSRV 281 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 G + + A + + G+ T+ L+ G P + +A ++ +D+GW Sbjct: 282 IPGKDQAIIGYKAPLVDVAAGQQAEVTSKLWVG----PKLQDQMAKVA-NHLDLTVDYGW 336 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +FIA+P+ L++ F+ V N+G+AI++ T+ V+ + FPL K QY S A M+ +QPK+ Sbjct: 337 LWFIAQPLHWLLTVFHGFVQNWGVAIIMLTLLVRGIMFPLTKAQYTSMAKMRMLQPKLAA 396 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 LRE+F Q + + M++LYK +NPL GC PIL+Q+P+F A+Y + S+E+RHAPF Sbjct: 397 LRERFGDD-RQKMSQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWALMESVELRHAPF 455 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQA 517 WI DL+ DP F L PI+M SM+ KMSP D Q Sbjct: 456 ALWITDLSVKDP--FFVL-----------------PILMGASMWYLQKMSPTTITDPMQQ 496 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ +MP++F F FPAGL +YW SNVISI QQ +I + Sbjct: 497 KVMQFMPIIFTFMFLWFPAGLTLYWLVSNVISITQQTIIYR 537 >gi|297520055|ref|ZP_06938441.1| putative inner membrane protein translocase component YidC [Escherichia coli OP50] Length = 517 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 196 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 254 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 255 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 308 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 309 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 368 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 369 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 427 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 428 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 468 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 469 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 502 >gi|194431207|ref|ZP_03063500.1| inner membrane protein OxaA [Shigella dysenteriae 1012] gi|194420662|gb|EDX36738.1| inner membrane protein OxaA [Shigella dysenteriae 1012] Length = 548 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMATVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|157156055|ref|YP_001465190.1| putative inner membrane protein translocase component YidC [Escherichia coli E24377A] gi|166975860|sp|A7ZTR1|OXAA_ECO24 RecName: Full=Inner membrane protein oxaA gi|157078085|gb|ABV17793.1| inner membrane protein OxaA [Escherichia coli E24377A] Length = 548 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|212632922|ref|YP_002309447.1| inner membrane protein, 60 kDa [Shewanella piezotolerans WP3] gi|254778162|sp|B8CH68|OXAA_SHEPW RecName: Full=Inner membrane protein oxaA gi|212554406|gb|ACJ26860.1| Inner membrane protein, 60 kDa, putative [Shewanella piezotolerans WP3] Length = 542 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 126/409 (30%), Positives = 211/409 (51%), Gaps = 34/409 (8%) Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSID-QIRFSPRGRIMRHKPQTAT 211 T + L + AN + + + + VD NN+ D Q++ G+I +H + + Sbjct: 153 TLEVPLTYLAANGVTYTKLFTFYRGKHNVDVDYQINNTSDAQLQVQMYGQI-KHSIKKSE 211 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES--NSWLGISDKYWASVFIPSKET 269 ++ + A +KYS + + N ++S W+ + Y+ S ++P E Sbjct: 212 SSMMMPTYRGAAFSTADTRYEKYS-FDDMADKNLNKSTLGGWVAMLQHYFVSAWVPP-EN 269 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + F +S G F I PG + + G K+ + + L Sbjct: 270 DKNIIFSSVSAG-GLANIGFRGALYDIAPGTEQSIKAQFYVGPKDQEALSALSESL---- 324 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 +++D+G+ +++A P+ L+ ++ + VGN+G+AI+L T+ V+ + +PL K QY S A M Sbjct: 325 -NLVVDYGFLWWLAIPIHWLLMFYQSFVGNWGVAIILITLTVRGMLYPLTKAQYTSMAKM 383 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +N+QPK+ +++E+F Q + +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ Sbjct: 384 RNLQPKLADMKERFGDDR-QKMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLE 442 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S E+RHAPF WI DL+ D P+Y + PI+M +SMFI KM P Sbjct: 443 SYELRHAPFMLWITDLSVQD-----------PYY--------VMPILMGVSMFIMQKMQP 483 Query: 510 --PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P D Q ++ WMPV+F FPAGL++YW N+++I QQ +I Sbjct: 484 MAPTMDPMQVKMMQWMPVIFTVFFLWFPAGLVLYWLVGNLVAITQQKII 532 >gi|84394512|ref|ZP_00993222.1| putative inner membrane protein translocase component YidC [Vibrio splendidus 12B01] gi|84374865|gb|EAP91802.1| putative inner membrane protein translocase component YidC [Vibrio splendidus 12B01] Length = 540 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 149/519 (28%), Positives = 239/519 (46%), Gaps = 47/519 (9%) Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 SYA L Q ++ + + + L SI+ G NL Y + S V L Sbjct: 47 SYADDLDPAPGQQVASAKTITVTTDVLTLSIDTVGGDVVQANLNDYSAEFDSEDTFVLL- 105 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNI 166 N F + I+L ++N +S T I + ++ AN + Sbjct: 106 --KNEPGHQFIAQSGLVGPQGIDLSSTNRPSYTVSADSFTLADGQDELRIPMTYQ-ANGL 162 Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVL 224 + +T L Y + V NNS F + ++ + T G Sbjct: 163 DYTKTFVLKRGSYAMDVEYDVVNNSGTNATFGMYAHLRQNVMDDGGSLTMPTYRGGAYST 222 Query: 225 GDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETS---FHSQFKYLSD 280 D + + D++ ++S N W + Y+AS +IP E + L D Sbjct: 223 EDTRYKKYSFDDMQDRNLSLNLANGQGWAAMIQHYFASAWIPRDEAGSNLYTRVIGNLGD 282 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 R K TI G + L+ G P + +A P ++++D+GW + Sbjct: 283 IGVRMPNK------TIATGDEASFKATLWVG----PKLQDQMAAVA-PNLDLVVDYGWLW 331 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIAKP+ L+S+ +V N+G+AI+ T V+ +PL K QY S A M+ +QPK+ +R Sbjct: 332 FIAKPLHTLLSFIQGIVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMR 391 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + + M++LYK +NPL GC PI+LQ+P+F ++Y + S+E+RH+PF+G Sbjct: 392 ERIGDDR-QRMSQEMMELYKKEKVNPLGGCLPIILQMPIFISLYWALMESVELRHSPFFG 450 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI DL+A D P+Y I P++M SMF+ KMSP D Q I Sbjct: 451 WITDLSAQD-----------PYY--------ILPLLMGASMFLIQKMSPTTVTDPMQQKI 491 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +MPV+F F FP+GL++YW SN+++++QQ +I + Sbjct: 492 MTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYR 530 >gi|170766557|ref|ZP_02901010.1| inner membrane protein OxaA [Escherichia albertii TW07627] gi|170123995|gb|EDS92926.1| inner membrane protein OxaA [Escherichia albertii TW07627] Length = 548 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|94676570|ref|YP_588605.1| putative inner membrane protein translocase component YidC [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219720|gb|ABF13879.1| inner membrane protein oxaA [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 533 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 111/332 (33%), Positives = 187/332 (56%), Gaps = 29/332 (8%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + DI+++++ N W+ + +Y+ + ++P T + F + + F + E Sbjct: 229 FKDIQQTNL-NVSSKKGWIAMLQQYFVTAWVPI--TQGYKNFYTTNLENGEVAIGFQSEE 285 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + I P K L+ G P I ++ P ++ +D+G +FI+KP+F L+ + Sbjct: 286 VNIAPHKQDNLNAILWLG----PKIQDKMAEID-PYLDLAVDYGLLWFISKPLFKLLKFI 340 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y+++GN+G AI++ T V+ L +PL K QY S A M +QPK+ +RE+F +P + Q+ Sbjct: 341 YSIIGNWGFAIIIITFIVRGLMYPLTKAQYTSIAKMMILQPKLAVIRERFSDNPQRQNQE 400 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M LYK INPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI+DL+A D Sbjct: 401 LM-ALYKAEKINPLGGCLPLIIQMPIFLALYYMLSGSIELRHAPFALWIQDLSAQD---- 455 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 P+Y I PIIM ++M I K+SP D Q I+N+MP++F Sbjct: 456 -------PYY--------ILPIIMGITMLIIQKISPTTITDPIQQKIMNFMPIIFTVFFL 500 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 FP+GL++Y+ SN+ +I+QQ +I + ++ Sbjct: 501 WFPSGLVLYYIVSNLFTIIQQELIYREFKKQV 532 >gi|82546030|ref|YP_409977.1| inner membrane protein translocase component YidC [Shigella boydii Sb227] gi|187730301|ref|YP_001882461.1| putative inner membrane protein translocase component YidC [Shigella boydii CDC 3083-94] gi|123558282|sp|Q31UV9|OXAA_SHIBS RecName: Full=Inner membrane protein oxaA gi|254778164|sp|B2TUS3|OXAA_SHIB3 RecName: Full=Inner membrane protein oxaA gi|81247441|gb|ABB68149.1| 60 kDa inner-membrane protein [Shigella boydii Sb227] gi|187427293|gb|ACD06567.1| inner membrane protein OxaA [Shigella boydii CDC 3083-94] Length = 548 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKTQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|56480409|ref|NP_709495.2| putative inner membrane protein translocase component YidC [Shigella flexneri 2a str. 301] gi|33300911|sp|P59783|OXAA_SHIFL RecName: Full=Inner membrane protein oxaA gi|56383960|gb|AAN45202.2| 60 KD inner-membrane protein [Shigella flexneri 2a str. 301] gi|281603068|gb|ADA76052.1| Inner membrane protein oxaA [Shigella flexneri 2002017] gi|332750526|gb|EGJ80935.1| inner membrane protein oxaA [Shigella flexneri K-671] gi|332751712|gb|EGJ82110.1| inner membrane protein oxaA [Shigella flexneri 2747-71] Length = 548 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 107/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGT--NNFYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|193069129|ref|ZP_03050086.1| inner membrane protein OxaA [Escherichia coli E110019] gi|192957453|gb|EDV87899.1| inner membrane protein OxaA [Escherichia coli E110019] Length = 548 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|15804299|ref|NP_290338.1| putative inner membrane protein translocase component YidC [Escherichia coli O157:H7 EDL933] gi|15833894|ref|NP_312667.1| inner membrane protein translocase component YidC [Escherichia coli O157:H7 str. Sakai] gi|26250446|ref|NP_756486.1| putative inner membrane protein translocase component YidC [Escherichia coli CFT073] gi|74314020|ref|YP_312439.1| putative inner membrane protein translocase component YidC [Shigella sonnei Ss046] gi|91213230|ref|YP_543216.1| putative inner membrane protein translocase component YidC [Escherichia coli UTI89] gi|110644048|ref|YP_671778.1| putative inner membrane protein translocase component YidC [Escherichia coli 536] gi|117625980|ref|YP_859303.1| putative inner membrane protein translocase component YidC [Escherichia coli APEC O1] gi|157163186|ref|YP_001460504.1| putative inner membrane protein translocase component YidC [Escherichia coli HS] gi|168748575|ref|ZP_02773597.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4113] gi|168753598|ref|ZP_02778605.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4401] gi|168759895|ref|ZP_02784902.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4501] gi|168766196|ref|ZP_02791203.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4486] gi|168772256|ref|ZP_02797263.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4196] gi|168779931|ref|ZP_02804938.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4076] gi|168786539|ref|ZP_02811546.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC869] gi|168798744|ref|ZP_02823751.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC508] gi|170022258|ref|YP_001727212.1| putative inner membrane protein translocase component YidC [Escherichia coli ATCC 8739] gi|170680368|ref|YP_001746035.1| putative inner membrane protein translocase component YidC [Escherichia coli SMS-3-5] gi|191170354|ref|ZP_03031907.1| inner membrane protein OxaA [Escherichia coli F11] gi|195936328|ref|ZP_03081710.1| putative inner membrane protein translocase component YidC [Escherichia coli O157:H7 str. EC4024] gi|208806756|ref|ZP_03249093.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4206] gi|208813372|ref|ZP_03254701.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4045] gi|208818916|ref|ZP_03259236.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4042] gi|209400160|ref|YP_002273233.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4115] gi|209921182|ref|YP_002295266.1| putative inner membrane protein translocase component YidC [Escherichia coli SE11] gi|215489045|ref|YP_002331476.1| putative inner membrane protein translocase component YidC [Escherichia coli O127:H6 str. E2348/69] gi|217325489|ref|ZP_03441573.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. TW14588] gi|218556272|ref|YP_002389186.1| putative inner membrane protein translocase component YidC [Escherichia coli IAI1] gi|218560781|ref|YP_002393694.1| inner membrane protein translocase component YidC [Escherichia coli S88] gi|218691994|ref|YP_002400206.1| putative inner membrane protein translocase component YidC [Escherichia coli ED1a] gi|218697428|ref|YP_002405095.1| putative inner membrane protein translocase component YidC [Escherichia coli 55989] gi|218702555|ref|YP_002410184.1| putative inner membrane protein translocase component YidC [Escherichia coli IAI39] gi|218707352|ref|YP_002414871.1| putative inner membrane protein translocase component YidC [Escherichia coli UMN026] gi|227883928|ref|ZP_04001733.1| Oxa1 family cytochrome oxidase biogenesis protein [Escherichia coli 83972] gi|237703507|ref|ZP_04533988.1| inner-membrane protein [Escherichia sp. 3_2_53FAA] gi|254795708|ref|YP_003080545.1| putative inner membrane protein translocase component YidC [Escherichia coli O157:H7 str. TW14359] gi|256021276|ref|ZP_05435141.1| putative inner membrane protein translocase component YidC [Shigella sp. D9] gi|260846510|ref|YP_003224288.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O103:H2 str. 12009] gi|260857884|ref|YP_003231775.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O26:H11 str. 11368] gi|261225859|ref|ZP_05940140.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O157:H7 str. FRIK2000] gi|261258904|ref|ZP_05951437.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O157:H7 str. FRIK966] gi|291285124|ref|YP_003501942.1| Preprotein translocase subunit YidC [Escherichia coli O55:H7 str. CB9615] gi|293407345|ref|ZP_06651267.1| inner membrane protein translocase component YidC [Escherichia coli FVEC1412] gi|293413160|ref|ZP_06655826.1| conserved hypothetical protein [Escherichia coli B354] gi|298383086|ref|ZP_06992681.1| inner membrane protein oxaA [Escherichia coli FVEC1302] gi|300815047|ref|ZP_07095272.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 107-1] gi|300824309|ref|ZP_07104425.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 119-7] gi|300896034|ref|ZP_07114595.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 198-1] gi|300903018|ref|ZP_07120960.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 84-1] gi|300925529|ref|ZP_07141404.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 182-1] gi|300940891|ref|ZP_07155418.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 21-1] gi|300983658|ref|ZP_07176699.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 200-1] gi|300984535|ref|ZP_07177025.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 45-1] gi|301020905|ref|ZP_07184960.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 69-1] gi|301047525|ref|ZP_07194601.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 185-1] gi|301305948|ref|ZP_07212030.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 124-1] gi|301325003|ref|ZP_07218553.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 78-1] gi|306815941|ref|ZP_07450079.1| putative inner membrane protein translocase component YidC [Escherichia coli NC101] gi|307313226|ref|ZP_07592851.1| membrane protein insertase [Escherichia coli W] gi|312967885|ref|ZP_07782097.1| inner membrane protein oxaA [Escherichia coli 2362-75] gi|331649533|ref|ZP_08350619.1| inner membrane protein OxaA [Escherichia coli M605] gi|331660049|ref|ZP_08360987.1| inner membrane protein OxaA [Escherichia coli TA206] gi|331665356|ref|ZP_08366257.1| inner membrane protein OxaA [Escherichia coli TA143] gi|331670550|ref|ZP_08371389.1| inner membrane protein OxaA [Escherichia coli TA271] gi|331675197|ref|ZP_08375950.1| inner membrane protein OxaA [Escherichia coli TA280] gi|331679804|ref|ZP_08380474.1| inner membrane protein OxaA [Escherichia coli H591] gi|331685430|ref|ZP_08386016.1| inner membrane protein OxaA [Escherichia coli H299] gi|332282505|ref|ZP_08394918.1| inner-membrane protein [Shigella sp. D9] gi|54038803|sp|P65625|OXAA_ECO57 RecName: Full=Inner membrane protein oxaA gi|54041692|sp|P65624|OXAA_ECOL6 RecName: Full=Inner membrane protein oxaA gi|122421835|sp|Q1R4M9|OXAA_ECOUT RecName: Full=Inner membrane protein oxaA gi|122957862|sp|Q0TB02|OXAA_ECOL5 RecName: Full=Inner membrane protein oxaA gi|123615901|sp|Q3YWA8|OXAA_SHISS RecName: Full=Inner membrane protein oxaA gi|166975861|sp|A8A6G7|OXAA_ECOHS RecName: Full=Inner membrane protein oxaA gi|166975862|sp|A1AHN9|OXAA_ECOK1 RecName: Full=Inner membrane protein oxaA gi|189036350|sp|B1IX33|OXAA_ECOLC RecName: Full=Inner membrane protein oxaA gi|254772773|sp|B7UMH2|OXAA_ECO27 RecName: Full=Inner membrane protein oxaA gi|254772774|sp|B7MGC7|OXAA_ECO45 RecName: Full=Inner membrane protein oxaA gi|254772775|sp|B7L849|OXAA_ECO55 RecName: Full=Inner membrane protein oxaA gi|254772776|sp|B5YXA9|OXAA_ECO5E RecName: Full=Inner membrane protein oxaA gi|254772777|sp|B7NR08|OXAA_ECO7I RecName: Full=Inner membrane protein oxaA gi|254772778|sp|B7N210|OXAA_ECO81 RecName: Full=Inner membrane protein oxaA gi|254772779|sp|B7M558|OXAA_ECO8A RecName: Full=Inner membrane protein oxaA gi|254772781|sp|B7NF23|OXAA_ECOLU RecName: Full=Inner membrane protein oxaA gi|254772782|sp|B6I3T8|OXAA_ECOSE RecName: Full=Inner membrane protein oxaA gi|254772783|sp|B1LL32|OXAA_ECOSM RecName: Full=Inner membrane protein oxaA gi|12518544|gb|AAG58902.1|AE005601_8 60 KD inner-membrane protein [Escherichia coli O157:H7 str. EDL933] gi|26110876|gb|AAN83060.1|AE016769_175 60 kDa inner-membrane protein [Escherichia coli CFT073] gi|13364115|dbj|BAB38063.1| 60 KD inner-membrane protein [Escherichia coli O157:H7 str. Sakai] gi|73857497|gb|AAZ90204.1| 60 kDa inner-membrane protein [Shigella sonnei Ss046] gi|91074804|gb|ABE09685.1| 60 KD inner-membrane protein [Escherichia coli UTI89] gi|110345640|gb|ABG71877.1| 60 kDa inner-membrane protein [Escherichia coli 536] gi|115515104|gb|ABJ03179.1| inner membrane protein translocase component YidC [Escherichia coli APEC O1] gi|157068866|gb|ABV08121.1| inner membrane protein OxaA [Escherichia coli HS] gi|169757186|gb|ACA79885.1| 60 kDa inner membrane insertion protein [Escherichia coli ATCC 8739] gi|170518086|gb|ACB16264.1| inner membrane protein OxaA [Escherichia coli SMS-3-5] gi|187771700|gb|EDU35544.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4196] gi|188016887|gb|EDU55009.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4113] gi|189002654|gb|EDU71640.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4076] gi|189359277|gb|EDU77696.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4401] gi|189364371|gb|EDU82790.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4486] gi|189369628|gb|EDU88044.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4501] gi|189373378|gb|EDU91794.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC869] gi|189378759|gb|EDU97175.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC508] gi|190909162|gb|EDV68748.1| inner membrane protein OxaA [Escherichia coli F11] gi|208726557|gb|EDZ76158.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4206] gi|208734649|gb|EDZ83336.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4045] gi|208739039|gb|EDZ86721.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4042] gi|209161560|gb|ACI38993.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4115] gi|209754078|gb|ACI75346.1| GTP-binding protein in thiophene and furan oxidation [Escherichia coli] gi|209754080|gb|ACI75347.1| GTP-binding protein in thiophene and furan oxidation [Escherichia coli] gi|209754082|gb|ACI75348.1| GTP-binding protein in thiophene and furan oxidation [Escherichia coli] gi|209754084|gb|ACI75349.1| GTP-binding protein in thiophene and furan oxidation [Escherichia coli] gi|209754086|gb|ACI75350.1| GTP-binding protein in thiophene and furan oxidation [Escherichia coli] gi|209914441|dbj|BAG79515.1| conserved hypothetical protein [Escherichia coli SE11] gi|215267117|emb|CAS11564.1| cytoplasmic insertase into membrane protein, Sec-system [Escherichia coli O127:H6 str. E2348/69] gi|217321710|gb|EEC30134.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. TW14588] gi|218354160|emb|CAV00764.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli 55989] gi|218363041|emb|CAR00680.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli IAI1] gi|218367550|emb|CAR05335.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli S88] gi|218372541|emb|CAR20416.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli IAI39] gi|218429558|emb|CAR10381.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli ED1a] gi|218434449|emb|CAR15377.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli UMN026] gi|222035420|emb|CAP78165.1| Inner membrane protein oxaA [Escherichia coli LF82] gi|226902771|gb|EEH89030.1| inner-membrane protein [Escherichia sp. 3_2_53FAA] gi|227839206|gb|EEJ49672.1| Oxa1 family cytochrome oxidase biogenesis protein [Escherichia coli 83972] gi|254595108|gb|ACT74469.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O157:H7 str. TW14359] gi|257756533|dbj|BAI28035.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O26:H11 str. 11368] gi|257761657|dbj|BAI33154.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O103:H2 str. 12009] gi|281180760|dbj|BAI57090.1| conserved hypothetical protein [Escherichia coli SE15] gi|284923789|emb|CBG36887.1| inner membrane protein [Escherichia coli 042] gi|290764997|gb|ADD58958.1| Preprotein translocase subunit YidC [Escherichia coli O55:H7 str. CB9615] gi|291425636|gb|EFE98672.1| inner membrane protein translocase component YidC [Escherichia coli FVEC1412] gi|291468293|gb|EFF10788.1| conserved hypothetical protein [Escherichia coli B354] gi|294493492|gb|ADE92248.1| inner membrane protein OxaA [Escherichia coli IHE3034] gi|298276922|gb|EFI18440.1| inner membrane protein oxaA [Escherichia coli FVEC1302] gi|300300585|gb|EFJ56970.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 185-1] gi|300306881|gb|EFJ61401.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 200-1] gi|300360094|gb|EFJ75964.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 198-1] gi|300398372|gb|EFJ81910.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 69-1] gi|300404924|gb|EFJ88462.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 84-1] gi|300408368|gb|EFJ91906.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 45-1] gi|300418369|gb|EFK01680.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 182-1] gi|300454372|gb|EFK17865.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 21-1] gi|300523196|gb|EFK44265.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 119-7] gi|300531939|gb|EFK53001.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 107-1] gi|300838799|gb|EFK66559.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 124-1] gi|300848097|gb|EFK75857.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 78-1] gi|305850337|gb|EFM50794.1| putative inner membrane protein translocase component YidC [Escherichia coli NC101] gi|306906909|gb|EFN37418.1| membrane protein insertase [Escherichia coli W] gi|307555846|gb|ADN48621.1| 60 kDa inner-membrane protein [Escherichia coli ABU 83972] gi|307628782|gb|ADN73086.1| putative inner membrane protein translocase component YidC [Escherichia coli UM146] gi|312287446|gb|EFR15354.1| inner membrane protein oxaA [Escherichia coli 2362-75] gi|312948273|gb|ADR29100.1| putative inner membrane protein translocase component YidC [Escherichia coli O83:H1 str. NRG 857C] gi|315063011|gb|ADT77338.1| cytoplasmic insertase into membrane protein, sec system [Escherichia coli W] gi|315254606|gb|EFU34574.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 85-1] gi|315285489|gb|EFU44934.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 110-3] gi|315296905|gb|EFU56193.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 16-3] gi|320201267|gb|EFW75848.1| Inner membrane protein translocase component YidC, long form [Escherichia coli EC4100B] gi|320639431|gb|EFX09046.1| membrane protein insertase [Escherichia coli O157:H7 str. G5101] gi|320644874|gb|EFX13910.1| membrane protein insertase [Escherichia coli O157:H- str. 493-89] gi|320650138|gb|EFX18634.1| membrane protein insertase [Escherichia coli O157:H- str. H 2687] gi|320655486|gb|EFX23421.1| membrane protein insertase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661112|gb|EFX28548.1| membrane protein insertase [Escherichia coli O55:H7 str. USDA 5905] gi|320666238|gb|EFX33244.1| membrane protein insertase [Escherichia coli O157:H7 str. LSU-61] gi|323155382|gb|EFZ41565.1| inner membrane protein oxaA [Escherichia coli EPECa14] gi|323380927|gb|ADX53195.1| membrane protein insertase, YidC/Oxa1 family domain containing [Escherichia coli KO11] gi|323939231|gb|EGB35444.1| membrane protein insertase [Escherichia coli E482] gi|323944178|gb|EGB40258.1| membrane protein insertase [Escherichia coli H120] gi|323949950|gb|EGB45834.1| membrane protein insertase [Escherichia coli H252] gi|323954999|gb|EGB50777.1| membrane protein insertase [Escherichia coli H263] gi|323975227|gb|EGB70331.1| membrane protein insertase [Escherichia coli TW10509] gi|324008042|gb|EGB77261.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 57-2] gi|324012733|gb|EGB81952.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 60-1] gi|324018426|gb|EGB87645.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 117-3] gi|324115942|gb|EGC09868.1| membrane protein insertase [Escherichia coli E1167] gi|330908022|gb|EGH36541.1| inner membrane protein translocase component YidC, long form [Escherichia coli AA86] gi|331042031|gb|EGI14175.1| inner membrane protein OxaA [Escherichia coli M605] gi|331053264|gb|EGI25297.1| inner membrane protein OxaA [Escherichia coli TA206] gi|331057866|gb|EGI29852.1| inner membrane protein OxaA [Escherichia coli TA143] gi|331062612|gb|EGI34532.1| inner membrane protein OxaA [Escherichia coli TA271] gi|331067642|gb|EGI39044.1| inner membrane protein OxaA [Escherichia coli TA280] gi|331072976|gb|EGI44301.1| inner membrane protein OxaA [Escherichia coli H591] gi|331077801|gb|EGI49013.1| inner membrane protein OxaA [Escherichia coli H299] gi|332104857|gb|EGJ08203.1| inner-membrane protein [Shigella sp. D9] Length = 548 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|332084044|gb|EGI89251.1| inner membrane protein oxaA [Shigella dysenteriae 155-74] Length = 531 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 210 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 268 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 269 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMATVA-PHLDLTVDYGWLWFISQP 322 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 323 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 382 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 383 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 441 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 442 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 482 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 483 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 516 >gi|324111603|gb|EGC05584.1| membrane protein insertase [Escherichia fergusonii B253] Length = 548 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|194428126|ref|ZP_03060670.1| inner membrane protein OxaA [Escherichia coli B171] gi|194413884|gb|EDX30162.1| inner membrane protein OxaA [Escherichia coli B171] Length = 548 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|16131573|ref|NP_418161.1| membrane protein insertase [Escherichia coli str. K-12 substr. MG1655] gi|89110307|ref|AP_004087.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli str. K-12 substr. W3110] gi|170083207|ref|YP_001732527.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli str. K-12 substr. DH10B] gi|188495796|ref|ZP_03003066.1| membrane protein OxaA [Escherichia coli 53638] gi|191165799|ref|ZP_03027637.1| inner membrane protein OxaA [Escherichia coli B7A] gi|238902796|ref|YP_002928592.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli BW2952] gi|254038924|ref|ZP_04872976.1| inner membrane protein oxaA [Escherichia sp. 1_1_43] gi|256025563|ref|ZP_05439428.1| putative inner membrane protein translocase component YidC [Escherichia sp. 4_1_40B] gi|300917465|ref|ZP_07134125.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 115-1] gi|300947533|ref|ZP_07161710.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 116-1] gi|300956289|ref|ZP_07168591.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 175-1] gi|301028499|ref|ZP_07191739.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 196-1] gi|301644378|ref|ZP_07244379.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 146-1] gi|307140406|ref|ZP_07499762.1| putative inner membrane protein translocase component YidC [Escherichia coli H736] gi|309795745|ref|ZP_07690160.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 145-7] gi|331644430|ref|ZP_08345559.1| inner membrane protein OxaA [Escherichia coli H736] gi|331655367|ref|ZP_08356366.1| inner membrane protein OxaA [Escherichia coli M718] gi|398974|sp|P25714|OXAA_ECOLI RecName: Full=Inner membrane protein oxaA gi|254772780|sp|B1X9T4|OXAA_ECODH RecName: Full=Inner membrane protein oxaA gi|259515689|sp|C4ZYY3|OXAA_ECOBW RecName: Full=Inner membrane protein oxaA gi|290553|gb|AAA62056.1| 60 kD protein [Escherichia coli] gi|1790140|gb|AAC76728.1| membrane protein insertase [Escherichia coli str. K-12 substr. MG1655] gi|85676338|dbj|BAE77588.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli str. K12 substr. W3110] gi|169891042|gb|ACB04749.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli str. K-12 substr. DH10B] gi|188490995|gb|EDU66098.1| membrane protein OxaA [Escherichia coli 53638] gi|190904123|gb|EDV63834.1| inner membrane protein OxaA [Escherichia coli B7A] gi|226838889|gb|EEH70916.1| inner membrane protein oxaA [Escherichia sp. 1_1_43] gi|238860712|gb|ACR62710.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli BW2952] gi|260451437|gb|ACX41859.1| YidC translocase/secretase [Escherichia coli DH1] gi|299878461|gb|EFI86672.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 196-1] gi|300316876|gb|EFJ66660.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 175-1] gi|300415269|gb|EFJ98579.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 115-1] gi|300452870|gb|EFK16490.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 116-1] gi|301077319|gb|EFK92125.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 146-1] gi|308120624|gb|EFO57886.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 145-7] gi|309704153|emb|CBJ03500.1| inner membrane protein [Escherichia coli ETEC H10407] gi|315138290|dbj|BAJ45449.1| putative inner membrane protein translocase component [Escherichia coli DH1] gi|323934943|gb|EGB31321.1| membrane protein insertase [Escherichia coli E1520] gi|331036724|gb|EGI08950.1| inner membrane protein OxaA [Escherichia coli H736] gi|331047382|gb|EGI19460.1| inner membrane protein OxaA [Escherichia coli M718] Length = 548 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|323965767|gb|EGB61218.1| membrane protein insertase [Escherichia coli M863] Length = 548 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVLVQPGQAGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|194435576|ref|ZP_03067679.1| inner membrane protein OxaA [Escherichia coli 101-1] gi|253775660|ref|YP_003038491.1| inner membrane protein translocase component YidC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163657|ref|YP_003046765.1| putative inner membrane protein translocase component YidC [Escherichia coli B str. REL606] gi|300932337|ref|ZP_07147605.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 187-1] gi|194425119|gb|EDX41103.1| inner membrane protein OxaA [Escherichia coli 101-1] gi|242379245|emb|CAQ34050.1| inner-membrane protein insertion factor, subunit of SecD-SecF-YajC-YidC Secretion Complex and Sec Protein Secretion Complex [Escherichia coli BL21(DE3)] gi|253326704|gb|ACT31306.1| 60 kDa inner membrane insertion protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975558|gb|ACT41229.1| inner membrane protein translocase component YidC [Escherichia coli B str. REL606] gi|253979714|gb|ACT45384.1| inner membrane protein translocase component YidC [Escherichia coli BL21(DE3)] gi|300459923|gb|EFK23416.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 187-1] gi|323959771|gb|EGB55421.1| membrane protein insertase [Escherichia coli H489] gi|323971183|gb|EGB66429.1| membrane protein insertase [Escherichia coli TA007] Length = 548 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|327250848|gb|EGE62550.1| inner membrane protein oxaA [Escherichia coli STEC_7v] Length = 531 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 210 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 268 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 269 -IGYKSQPVLVQPGQAGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 322 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 323 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 382 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 383 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 441 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 442 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 482 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 483 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 516 >gi|218551236|ref|YP_002385028.1| inner membrane protein translocase component YidC [Escherichia fergusonii ATCC 35469] gi|254772785|sp|B7LK48|OXAA_ESCF3 RecName: Full=Inner membrane protein oxaA gi|218358778|emb|CAQ91436.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia fergusonii ATCC 35469] Length = 548 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|254427853|ref|ZP_05041560.1| 60Kd inner membrane protein [Alcanivorax sp. DG881] gi|196194022|gb|EDX88981.1| 60Kd inner membrane protein [Alcanivorax sp. DG881] Length = 582 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 151/540 (27%), Positives = 242/540 (44%), Gaps = 60/540 (11%) Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY--HLDVSSNS 105 Q D D + S R+E+ L IN G L L Y H+D + + Sbjct: 68 QADGDQPVAPQIDTPDTATSSRRIEVSTDVLRVEINPVGGDIVRLALPDYPKHID-TPDQ 126 Query: 106 PIVTLLSPSNTKNAYFAELDYV------STANNIELPNSNTVWNLISGKILTPTTPIKLV 159 P V + SN+ Y A+ V S+ ++ + L G + L Sbjct: 127 PFV-FMDQSNS-GTYVAQSGLVGKNGTDSSKGRPHWSSAQQSYQLAEGSNEL-NVDLTLT 183 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH---KPQTATNTFGV 216 N I+ T YL ++ V NN + G+I R P +T F Sbjct: 184 QDNGAEIIKRYTFE-KGSYLVRVSHIVRNNGSSPWTGALYGQIKRDGSDDPGLSTTGFAP 242 Query: 217 QEGFIAVL---GDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFH 272 ++ +K + + D+ + + + WL + Y+ S +IP + H Sbjct: 243 MPTYLGAAYWNPEKPYNKLTFDDMSEDGVKLDQTVEGGWLAMVQHYFVSAWIPDAKQKNH 302 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 YL +Y +F + T+ PG+ +AG K+ + P M Sbjct: 303 YSSVYLQ-SRDQYLLRFVSPNTTVQPGEESVLYAEFYAGPKQQDNLEAIS-----PGLNM 356 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNL--------------VGNFGIAIMLTTVFVKLLFFPL 378 +D+GW +FI++P+F L+ + + VGN+G+AI+L T +K +FF L Sbjct: 357 TVDYGWLWFISQPIFALLVFLQSGEVSVFGMDIDIGGGVGNWGVAIILLTFIIKAIFFKL 416 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 + Y S A M+ + P++ ++E+ K Q Q + L+K INPL GC P+L+Q+P Sbjct: 417 SATSYRSMAKMRKVAPEMQRIKEQNKNDK-QKQQMETMNLFKREKINPLGGCLPMLVQMP 475 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 VF A+Y V+ S+E+R APF+ WI DL+ DP F L PI+M Sbjct: 476 VFIALYYVLLESVELRQAPFFLWINDLSVMDP--YFVL-----------------PILMG 516 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 SMF+Q +++P PAD QA ++ WMP++F + FPAGL++YW +N++SI QQ +I + Sbjct: 517 ASMFLQTRLNPTPADPTQAQVMKWMPMIFAVFMLWFPAGLVLYWLTNNILSIAQQWIITR 576 >gi|86147168|ref|ZP_01065484.1| putative inner membrane protein translocase component YidC [Vibrio sp. MED222] gi|218708091|ref|YP_002415712.1| putative inner membrane protein translocase component YidC [Vibrio splendidus LGP32] gi|254778171|sp|B7VGH7|OXAA_VIBSL RecName: Full=Inner membrane protein oxaA gi|85835052|gb|EAQ53194.1| putative inner membrane protein translocase component YidC [Vibrio sp. MED222] gi|218321110|emb|CAV17060.1| Inner membrane protein oxaA [Vibrio splendidus LGP32] Length = 539 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 154/563 (27%), Positives = 256/563 (45%), Gaps = 54/563 (9%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 +A+AL +++ N P + + + T+ P+ D+ +D ++ Sbjct: 9 LIALALVSFLLFQQWNVAQNPAPQAVEQAQSG-STLPAPSYADD------LDPAPGQVAS 61 Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 + + + L SI+ G NL Y + S V L N F + Sbjct: 62 AKTITVTTDVLTLSIDTVGGDVVTANLNDYSAEFDSEDTFVLL---KNEPGHQFIAQSGL 118 Query: 128 STANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLDE-HYLFK 181 I+L ++N +S T I + ++ AN + + +T L Y Sbjct: 119 VGPQGIDLSSTNRPSYTVSADSFTLAEGQDELRIPMTYQ-ANGLDYTKTFVLKRGSYAID 177 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + V NNS + F + ++ + T G D + + D++ Sbjct: 178 VEYDVVNNSGNNATFGMYAHLRQNVMDDGGSLTMPTYRGGAYSTEDTRYKKYSFDDMQDR 237 Query: 241 SIS-NFHESNSWLGISDKYWASVFIPSKETS---FHSQFKYLSDGHARYQAKFSANEITI 296 ++S N W + Y+AS +IP E + L D R K TI Sbjct: 238 NLSLNLANGQGWAAMIQHYFASAWIPRDEAGSNLYTRVIGNLGDIGVRMPNK------TI 291 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G + L+ G P + +A P ++++D+GW +FIAKP+ L+S+ + Sbjct: 292 ATGDEASFKATLWVG----PKLQDQMAAVA-PNLDLVVDYGWLWFIAKPLHTLLSFIQGI 346 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 V N+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + M+ Sbjct: 347 VVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGDDR-QRMSQEMM 405 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK +NPL GC PILLQ+P+F ++Y + S+E+RH+PF+GWI DL+A D Sbjct: 406 ELYKKEKVNPLGGCLPILLQMPIFISLYWALMESVELRHSPFFGWITDLSAQD------- 458 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 P+Y I P++M SMF+ KMSP D Q I+ +MPV+F F FP Sbjct: 459 ----PYY--------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLFFP 506 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 +GL++YW SN+++++QQ +I + Sbjct: 507 SGLVLYWLVSNIVTLIQQTLIYR 529 >gi|323161043|gb|EFZ46962.1| inner membrane protein oxaA [Escherichia coli E128010] Length = 531 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 210 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 268 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 269 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 322 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 323 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 382 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 383 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 441 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 442 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 482 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 483 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 516 >gi|309784245|ref|ZP_07678884.1| inner membrane protein oxaA [Shigella dysenteriae 1617] gi|308927752|gb|EFP73220.1| inner membrane protein oxaA [Shigella dysenteriae 1617] gi|315618589|gb|EFU99175.1| inner membrane protein oxaA [Escherichia coli 3431] gi|320180047|gb|EFW54989.1| Inner membrane protein translocase component YidC, long form [Shigella boydii ATCC 9905] gi|323173324|gb|EFZ58953.1| inner membrane protein oxaA [Escherichia coli LT-68] gi|332084895|gb|EGI90078.1| inner membrane protein oxaA [Shigella boydii 5216-82] gi|332345696|gb|AEE59030.1| inner membrane protein OxaA [Escherichia coli UMNK88] Length = 531 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 210 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 268 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 269 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 322 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 323 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 382 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 383 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 441 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 442 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 482 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 483 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 516 >gi|293417177|ref|ZP_06659804.1| inner membrane protein oxaA [Escherichia coli B185] gi|293464029|ref|ZP_06664443.1| inner membrane protein oxaA [Escherichia coli B088] gi|312972003|ref|ZP_07786177.1| inner membrane protein oxaA [Escherichia coli 1827-70] gi|291321661|gb|EFE61097.1| inner membrane protein oxaA [Escherichia coli B088] gi|291431208|gb|EFF04201.1| inner membrane protein oxaA [Escherichia coli B185] gi|310334380|gb|EFQ00585.1| inner membrane protein oxaA [Escherichia coli 1827-70] gi|320191195|gb|EFW65845.1| Inner membrane protein translocase component YidC, long form [Escherichia coli O157:H7 str. EC1212] gi|320193748|gb|EFW68381.1| Inner membrane protein translocase component YidC, long form [Escherichia coli WV_060327] gi|323164683|gb|EFZ50478.1| inner membrane protein oxaA [Shigella sonnei 53G] gi|323182500|gb|EFZ67904.1| inner membrane protein oxaA [Escherichia coli 1357] gi|323189560|gb|EFZ74840.1| inner membrane protein oxaA [Escherichia coli RN587/1] gi|325499510|gb|EGC97369.1| putative inner membrane protein translocase component YidC [Escherichia fergusonii ECD227] gi|326337246|gb|EGD61081.1| Inner membrane protein translocase component YidC, long form [Escherichia coli O157:H7 str. 1044] gi|326341617|gb|EGD65406.1| Inner membrane protein translocase component YidC, long form [Escherichia coli O157:H7 str. 1125] Length = 531 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 210 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 268 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 269 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 322 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 323 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 382 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 383 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 441 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 442 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 482 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 483 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 516 >gi|193063841|ref|ZP_03044928.1| inner membrane protein OxaA [Escherichia coli E22] gi|192930556|gb|EDV83163.1| inner membrane protein OxaA [Escherichia coli E22] Length = 548 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVPVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|320174821|gb|EFW49944.1| Inner membrane protein translocase component YidC, long form [Shigella dysenteriae CDC 74-1112] gi|320185530|gb|EFW60296.1| Inner membrane protein translocase component YidC, long form [Shigella flexneri CDC 796-83] gi|332089380|gb|EGI94484.1| inner membrane protein oxaA [Shigella boydii 3594-74] Length = 531 Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 210 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 268 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 269 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 322 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 323 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKTQYTSMAKMRMLQPKIQAMRERLGD 382 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 383 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 441 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 442 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 482 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 483 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 516 >gi|291278771|ref|YP_003495606.1| preprotein translocase YidC subunit [Deferribacter desulfuricans SSM1] gi|290753473|dbj|BAI79850.1| preprotein translocase YidC subunit [Deferribacter desulfuricans SSM1] Length = 504 Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 114/310 (36%), Positives = 181/310 (58%), Gaps = 36/310 (11%) Query: 251 WLGISDKYWASVFIPSKETSFHSQF--KYLSDGHARYQAKFSANEITILPGKSITTTNFL 308 W+G + KY F+ S T+F F KY + + N P ++ L Sbjct: 226 WIGYTTKY----FLFSTATNFEKGFIKKYKDSAIVGGEINYILN-----PRETKQLKLAL 276 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 F G KE+ + + +FE I++G F F+A PM +L++ FY+ + N+G+AI+L T Sbjct: 277 FTGPKEYKLLKS-----SGYKFEKSINFGIFSFLAIPMLLLLNMFYSFLHNYGVAIILLT 331 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +K++ +PL K S M+ IQP+I ++REKFK PQ + AM++LYK + +NP+ Sbjct: 332 IIIKIVTYPLTLKSMTSMKKMQLIQPEIQKIREKFK-GDPQKMNAAMMELYKKYGVNPMG 390 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+L+QIP+FFA+YK + +S+E++ +PF+GWI DL+ D P+Y Sbjct: 391 GCLPMLIQIPIFFALYKALLVSIELKGSPFFGWITDLSMKD-----------PYY----- 434 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I PI+M ++MFIQ KM+P D Q + +MP++F F +FP+GL+IYW +N++ Sbjct: 435 ---ITPILMGITMFIQQKMTPQAGDPTQQKLFMFMPIIFTFLFLNFPSGLVIYWLTNNIL 491 Query: 549 SIVQQAVIMK 558 +I+QQ I K Sbjct: 492 TIIQQYFINK 501 >gi|110807605|ref|YP_691125.1| putative inner membrane protein translocase component YidC [Shigella flexneri 5 str. 8401] gi|110617153|gb|ABF05820.1| 60 kDa inner-membrane protein [Shigella flexneri 5 str. 8401] gi|332750697|gb|EGJ81105.1| inner membrane protein oxaA [Shigella flexneri 4343-70] gi|332764076|gb|EGJ94313.1| inner-membrane protein insertion factor [Shigella flexneri 2930-71] gi|332996038|gb|EGK15665.1| inner membrane protein oxaA [Shigella flexneri VA-6] gi|332997270|gb|EGK16886.1| inner membrane protein oxaA [Shigella flexneri K-218] gi|332997871|gb|EGK17479.1| inner membrane protein oxaA [Shigella flexneri K-272] gi|333013180|gb|EGK32553.1| inner membrane protein oxaA [Shigella flexneri K-304] gi|333013666|gb|EGK33031.1| inner membrane protein oxaA [Shigella flexneri K-227] Length = 531 Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 107/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 210 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGT--NNFYTANLGNGIV 267 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 268 AIGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 322 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 323 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 382 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 383 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 441 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 442 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 482 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 483 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 516 >gi|256823857|ref|YP_003147820.1| 60 kDa inner membrane insertion protein [Kangiella koreensis DSM 16069] gi|256797396|gb|ACV28052.1| 60 kDa inner membrane insertion protein [Kangiella koreensis DSM 16069] Length = 536 Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 129/418 (30%), Positives = 216/418 (51%), Gaps = 50/418 (11%) Query: 156 IKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA---T 211 I L + N + + F +T + Y + V N S + ++ ++R + T Sbjct: 143 IPLTWVNEDGVEFTKTFKFKRDDYEIGVEYKVKNQSSNDRTYNFVAELIRDQKPTGLEEK 202 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-------NSWLGISDKYWASVFI 264 ++FG+ FI V S E+KY EK S+ + E W+G Y+ S +I Sbjct: 203 SSFGMSP-FIGVA--YSPEERKY---EKMSVEDLVEEPINVTRQGGWIGYLQHYFISAWI 256 Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITI-LPGKSITTTNF-LFAGAKEFPTIHHYE 322 P ++ Q K + + + T+ +P +S + N L+ G K + Sbjct: 257 PEQQ----EQIKVTTTVKSNQDTVIRFIQPTVSVPAQSESVINATLYVGPKILKRL---- 308 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 + A P E +D W ++I P++ LM +F++ VGN+G+AI+L T+ VK L +PL+ Q Sbjct: 309 -EAAAPGLEKSLDLSWVWWIGLPLYKLMQFFFSFVGNWGLAIILVTLVVKALLYPLSAAQ 367 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y S ANM+ + PK+ +L+E++ + Q +Q+ M+++YK NP GC P++LQ P+F A Sbjct: 368 YRSMANMRKLAPKMQQLKERYGED-KQRMQQEMMKMYKDEGANPFGGCLPMILQFPIFIA 426 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y V+ ++E+RHAPF WI+DL+ ADP + P++M SM+ Sbjct: 427 LYYVLFEAVELRHAPFVAWIQDLSVADPYFVL-------------------PLLMGGSMW 467 Query: 503 IQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + K+ P P D Q I++++P+VF + FPAGL++YW +N+IS+ QQ I K Sbjct: 468 LMQKLQPQSPTMDPMQQKIMSYLPIVFTVFMLFFPAGLVLYWLCNNLISVAQQQYITK 525 >gi|260870436|ref|YP_003236838.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O111:H- str. 11128] gi|257766792|dbj|BAI38287.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O111:H- str. 11128] Length = 548 Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 186/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQHISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|323143418|ref|ZP_08078103.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain [Succinatimonas hippei YIT 12066] gi|322416823|gb|EFY07472.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain [Succinatimonas hippei YIT 12066] Length = 548 Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 148/539 (27%), Positives = 258/539 (47%), Gaps = 58/539 (10%) Query: 48 QVDNSYAAVLIDDRAQAL----------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + D +AAV + AQA +++K+ +L +++LKG D L Sbjct: 24 ESDKYHAAVSAEQAAQAEIFNNSIAASEGAGKLIKIKSDALELTVDLKGGDIVDAKLCKV 83 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWN---LISGKILTPTT 154 ++ + P L+S N + L ++ P T N L G+ T Sbjct: 84 KQELGKDDPFHLLMSEPNFVYLAQSGLTGKDGPDSKVRPTFTTDANEYVLADGE---DTL 140 Query: 155 PIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH---KPQTA 210 + L F+ + + + +T +L+ + Y+ + V NNS + + G++ + Q Sbjct: 141 SVNLTFEQ-DGVTYVKTYTLNRDSYVVDVSYKVVNNSGKDLSMAFYGQLKQTVDVSQQQN 199 Query: 211 TNTFGVQEGFI---AVLGDKSLVEQK-YSDI-----EKSSISNFHESNSWLGISDKYWAS 261 + FG+ G A D + E++ + D+ EK ++ N W+ + Y+ + Sbjct: 200 SGAFGMVAGAYRGSAYSTDSTRYEKETFDDLVDLSKEKQNL-NVQTKGGWVAMIQHYFVA 258 Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP-GKSITTTNFLFAGAKEFPTIHH 320 +I + + + S R E T++ G + ++ G K + Sbjct: 259 SWIGDTDENVENVIYSNSSNADRDAIIGIRTEPTVIQNGSEHDFKSKMWIGPK-----NQ 313 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 +L P ++ +D+GW +FI+ P+F ++ + ++ +GN+G +I++ T+ V+ + FPL K Sbjct: 314 DNMELVAPNLDLTVDYGWLWFISIPLFKILEFIHSYIGNWGFSIIVLTLVVRSVLFPLTK 373 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 QY S A M+ + PK+ ELRE++K ++ Q+ M +LYKT +NPL GC+P+L+Q+P+F Sbjct: 374 AQYTSMAKMRLLTPKMQELRERYKDDRQKLGQETM-RLYKTEKVNPLGGCFPLLIQMPIF 432 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y + S E+RHAPF GWI DL+ DP Y + P++ ++ Sbjct: 433 IALYWTLMESTELRHAPFIGWIADLSVHDP------------YF-------VTPLLYGVT 473 Query: 501 MFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M+ KMSP P D Q ++ MP VF F +FPAGL +YW SN +I QQ +I K Sbjct: 474 MYFIQKMSPTPITDPMQRKVMMAMPFVFTFMFCTFPAGLTLYWLVSNCFTIFQQIIIYK 532 >gi|320157824|ref|YP_004190203.1| inner membrane protein translocase component YidC, long form [Vibrio vulnificus MO6-24/O] gi|319933136|gb|ADV88000.1| inner membrane protein translocase component YidC, long form [Vibrio vulnificus MO6-24/O] Length = 539 Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 116/334 (34%), Positives = 182/334 (54%), Gaps = 38/334 (11%) Query: 232 QKYS--DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETS---FHSQFKYLSDGHARY 285 +KYS D++ ++S W + Y+A+ +IP E + + D R Sbjct: 227 KKYSFEDMQDRNLSLTLANGQGWAAMIQHYFAAAWIPRNEPGANLYTRVIGNMGDIGVRM 286 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 K TI G S T L+AG P + ++A P ++++D+GW +FIAKP Sbjct: 287 PNK------TIADGDSAHFTATLWAG----PKLQDQMAEVA-PNLDLVVDYGWLWFIAKP 335 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + L+S ++VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Sbjct: 336 LHWLLSVIQSVVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD 395 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF WI DL Sbjct: 396 D-RQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFILWIHDL 454 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I P++M SMF+ KMSP D Q I+ +MP Sbjct: 455 SAQDPYFIL-------------------PLLMGGSMFLIQKMSPTTVTDPMQQKIMTFMP 495 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F F FP+GL++YW SN+++++QQ++I K Sbjct: 496 VMFTFFFLWFPSGLVLYWLVSNIVTLIQQSLIYK 529 >gi|323177717|gb|EFZ63301.1| inner membrane protein oxaA [Escherichia coli 1180] Length = 531 Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 186/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 210 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 268 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 269 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 322 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 323 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 382 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 383 DKQHISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 441 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 442 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 482 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 483 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 516 >gi|315292865|gb|EFU52217.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 153-1] Length = 548 Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 187/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PYLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|91795120|ref|YP_564771.1| 60 kDa inner membrane insertion protein [Shewanella denitrificans OS217] gi|123356330|sp|Q12HM8|OXAA_SHEDO RecName: Full=Inner membrane protein oxaA gi|91717122|gb|ABE57048.1| protein translocase subunit yidC [Shewanella denitrificans OS217] Length = 541 Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 128/410 (31%), Positives = 209/410 (50%), Gaps = 38/410 (9%) Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ-IRFSPRGRIMRH-KPQTA 210 T P+ LV + + + + VD NN+ D+ ++ G+I + KP Sbjct: 154 TVPLTLV--TDTGVRYTKVFTFTRGQFDVGVDYQVNNTSDKSLQLQMYGQIKQTIKPTEG 211 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES--NSWLGISDKYWASVFIPSKE 268 + G A + +KY D E + N +S W + Y+ S +IP Sbjct: 212 SMMMPTYRG--AAFSTSDVRYEKY-DFEDMADMNLSKSTLGGWAAMLQHYFVSAWIPPA- 267 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 T ++ F +S G F + PG + + + G K+ + + L Sbjct: 268 TDANTIFSSVSAG-GFANIGFRGAVYDVAPGSEQSISAQFYVGPKDQKALSAISETL--- 323 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 +++D+G+ +++A P++ L+ F +LV N+GIAI+L T+ V+ L +PL K QY S A Sbjct: 324 --NLVVDYGFLWWLAIPIYKLLMIFQSLVTNWGIAIILITLTVRGLLYPLTKAQYTSMAK 381 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+N+QPK+ +++E+F Q + +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ Sbjct: 382 MRNLQPKLADMKERFGDDR-QKMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLL 440 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S E+RHAPF WI DL+ D P+Y + P++M +SM++ KM Sbjct: 441 ESYELRHAPFMLWINDLSVQD-----------PYY--------VLPLLMGVSMWLMQKMQ 481 Query: 509 P--PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P P D Q ++ WMPV+F FPAGL++YW N+++I QQ +I Sbjct: 482 PIAPTMDPMQVKMMQWMPVIFTVFFLWFPAGLVLYWLVGNLVAITQQKII 531 >gi|119471654|ref|ZP_01614039.1| preprotein translocase [Alteromonadales bacterium TW-7] gi|119445433|gb|EAW26720.1| preprotein translocase [Alteromonadales bacterium TW-7] Length = 544 Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 147/569 (25%), Positives = 271/569 (47%), Gaps = 51/569 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIE-EMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 +R + + + +S ++ W N Y P+++ + + + + + + +S + L Sbjct: 4 QRTFLFIGLMLVSFLLFQEWNNDYNQPKVDPSATTQTQQANSTESDDFIPSSSESGL--P 61 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + L+ +E+ I+ KG + +L Y +P +L N Y Sbjct: 62 ASTTLAKRSVIEITTDVFKVKIDTKGGDIVESDLLQYEEVKGEETPF--MLLGEFDGNQY 119 Query: 121 FAELDYV------STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 F++ + ++AN +S ++G L + L F ++N + F +T Sbjct: 120 FSQSGLIGLNGPDASANGRPTYHSEQTSYTLTGDELR----VPLQFTDSNGVSFTKTYVF 175 Query: 175 DE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI-AVLGDKSLVEQ 232 + Y + TV N + I+ ++ R + + V + ++ A G + Sbjct: 176 KKGQYDVGLEYTVNNTTSAPIQVQLYTQVKRTVQEKGSL---VDQNYLGAAYGTDEEPYE 232 Query: 233 KYSDIEKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 KYS + N +ES ++ Y+ S ++P ++ + ++ + ++ +A Sbjct: 233 KYS-FSDMADKNLNESTQGGYIAFIQHYFVSAWVPKQDQT-NTLYSLITSSNAAIIGT-K 289 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 A + + G T T+ + G KE + DL ++ +D+GW +FI++P+F+L+ Sbjct: 290 AEPVNVQAGSEQTITSIYYMGPKESDVLEALHPDL-----DLTVDYGWLWFISQPLFVLL 344 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + Y+++GN+G+AI+ T+ VK L +PL K QY S A M+ +QPK+ L+EK+ Q Sbjct: 345 KWLYSILGNWGLAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMAALKEKYGDD-RQK 403 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 +A +++YK +NP+ GC+PILLQ+P+F A++ V S E+RHA F W+ DL+A D Sbjct: 404 FGQATMEMYKKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFMLWLTDLSAQD- 462 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVF 529 P+Y + PI+ SMFI K+ P D Q ++ +MPV+F Sbjct: 463 ----------PYY--------VLPILFGASMFITQKLQPMTVTDPMQQKMMTFMPVIFSV 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++YW SN+ISI Q I + Sbjct: 505 FFLWFPSGLVLYWLVSNLISIAQMLYIYR 533 >gi|27364440|ref|NP_759968.1| membrane protein insertase [Vibrio vulnificus CMCP6] gi|38503001|sp|Q8DDI2|OXAA_VIBVU RecName: Full=Inner membrane protein oxaA gi|27360559|gb|AAO09495.1| OxaI/YidC membrane insertion protein [Vibrio vulnificus CMCP6] Length = 539 Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 116/334 (34%), Positives = 181/334 (54%), Gaps = 38/334 (11%) Query: 232 QKYS--DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETS---FHSQFKYLSDGHARY 285 +KYS D++ ++S W + Y+A+ +IP E + + D R Sbjct: 227 KKYSFEDMQDRNLSLTLTNGQGWAAMIQHYFAAAWIPRNEPGANLYTRVIGNMGDIGVRM 286 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 K TI G S T L+AG P + ++A P ++++D+GW +FIAKP Sbjct: 287 PNK------TIADGDSAHFTATLWAG----PKLQDQMAEVA-PNLDLVVDYGWLWFIAKP 335 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + L+S + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Sbjct: 336 LHWLLSVIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD 395 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF WI DL Sbjct: 396 D-RQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFILWIHDL 454 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I P++M SMF+ KMSP D Q I+ +MP Sbjct: 455 SAQDPYFIL-------------------PLLMGGSMFLIQKMSPTTVTDPMQQKIMTFMP 495 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F F FP+GL++YW SN+++++QQ++I K Sbjct: 496 VMFTFFFLWFPSGLVLYWLVSNIVTLIQQSLIYK 529 >gi|238021627|ref|ZP_04602053.1| hypothetical protein GCWU000324_01529 [Kingella oralis ATCC 51147] gi|237866241|gb|EEP67283.1| hypothetical protein GCWU000324_01529 [Kingella oralis ATCC 51147] Length = 568 Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 139/504 (27%), Positives = 249/504 (49%), Gaps = 44/504 (8%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 V ++ ++ +I+ K L L+ H D + ++ L Y A+ + V Sbjct: 61 VSVETDTVKATIDEKSGDLRGLTLQ--HYDATHDTAQSFTLFADGKPLTYVAQSNLVDAN 118 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNN 189 N L N+N S + ++L N + ++ + + YL + V N Sbjct: 119 GNNILANANFQAASKSQTLNGDKLEVRLTAPAQNGVQVDKIYTFTKGSYLVNVRFEVKNT 178 Query: 190 SIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL----GDK------SLVEQKYSDIEK 239 S ++ +I+R + A + VL D + +++ + + Sbjct: 179 SSQAVKLGTSYQIVRDNSKPAGEGWFTSSYVGPVLYTPDADAFQKVQFATLDKDFEAGKD 238 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFH-SQFKYLSDGHAR-----YQAKFSANE 293 ++ S ++G+ Y+AS +I E + + G R Y A + Sbjct: 239 TAEYQRKASGGYVGMIQHYFASAWIMQPENGENLCTGGSCTIGIKRLPSNLYSAGVNTAA 298 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + I G S T L+AG P + K +A P+FE+ D+G + A P+F L+++ Sbjct: 299 VDIPAGGSKTFAANLYAG----PQVTSILKTIA-PKFELTKDYGRVHIFASPLFALLNWL 353 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV-LQ 412 + ++GN+G AI++ T+ VK + FPL +K Y S A M++IQPK++ L++K+ ++ +Q Sbjct: 354 HGIIGNWGWAIIVLTLIVKAILFPLNQKAYKSMAKMRSIQPKMEALKKKYPNPEDRMAMQ 413 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + +++LY+ INPL GC P+L+Q+P+F +Y +I +S+E+R AP+ GWI DL+ D Sbjct: 414 QELMKLYRDEKINPLGGCLPMLIQMPIFIGLYWMIFLSVELRQAPWLGWIHDLSRPD--- 470 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 PFY I PI+M+++M++Q KMSPPP+D QA ++ MP++F Sbjct: 471 --------PFY--------ILPILMAVTMYLQTKMSPPPSDPTQAQMMKIMPLMFSVMFF 514 Query: 533 SFPAGLIIYWSWSNVISIVQQAVI 556 FPA L++Y+ +N+++I QQ +I Sbjct: 515 FFPAALVLYYVVNNLLTIAQQWLI 538 >gi|37678187|ref|NP_932796.1| putative inner membrane protein translocase component YidC [Vibrio vulnificus YJ016] gi|61214266|sp|Q7MQK5|OXAA_VIBVY RecName: Full=Inner membrane protein oxaA gi|37196926|dbj|BAC92767.1| inner membrane protein, 60 kDa [Vibrio vulnificus YJ016] Length = 539 Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 115/334 (34%), Positives = 181/334 (54%), Gaps = 38/334 (11%) Query: 232 QKYS--DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETS---FHSQFKYLSDGHARY 285 +KYS D++ ++S W + Y+A+ +IP E + + D R Sbjct: 227 KKYSFEDMQDRNLSLTLTNGQGWAAMIQHYFAAAWIPRNEPGANLYTRVIGNMGDIGVRM 286 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 K T+ G S T L+AG P + ++A P ++++D+GW +FIAKP Sbjct: 287 PNK------TVADGDSAHFTATLWAG----PKLQDQMAEVA-PNLDLVVDYGWLWFIAKP 335 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + L+S + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Sbjct: 336 LHWLLSVIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD 395 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF WI DL Sbjct: 396 D-RQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFILWIHDL 454 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I P++M SMF+ KMSP D Q I+ +MP Sbjct: 455 SAQDPYFIL-------------------PLLMGGSMFLIQKMSPTTVTDPMQQKIMTFMP 495 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F F FP+GL++YW SN+++++QQ++I K Sbjct: 496 VMFTFFFLWFPSGLVLYWLVSNIVTLIQQSLIYK 529 >gi|239993746|ref|ZP_04714270.1| inner membrane protein, 60 kDa [Alteromonas macleodii ATCC 27126] Length = 552 Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 138/492 (28%), Positives = 247/492 (50%), Gaps = 37/492 (7%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 +E+K +L I+L G +L + ++ S+ P +LL N Y A+ + Sbjct: 80 IEVKTDTLDLRIDLLGGDVVSADLLKFPVEQGSDIP-YSLLRSGN--GLYVAQSGLIGAQ 136 Query: 131 NNIELPNSNTVWNLISG--KILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVT 187 + V+N S ++ + T I L +KN + +T + + Y + +V Sbjct: 137 GPDASSSGRPVYNAQSDYYEMTSDTLVIPLTWKNNQGLSVTKTFTFTKGQYDVNVSYSVE 196 Query: 188 NNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEKSSISNF 245 N + P ++ + + A + QKYS +IE ++ Sbjct: 197 NGTGSAATVQPYAQLKQVMEFEDDGNMFMPTYRGAAFSTEDDRYQKYSFDEIEDDNLRET 256 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 ++ W+G+ + Y+ S ++PS+E + + L + +A S +E ++ PG++ T Sbjct: 257 TKAG-WVGMLEHYFVSAWVPSQEQTNTLYSRNLKNQYAVI-GVLSPSE-SVAPGETKTLA 313 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + L+ G K+ ++ + L ++ +D+G ++I++P+F L+++ ++LV N+G+AI+ Sbjct: 314 STLYMGPKDQESLAKIARGL-----DLTVDYGILFWISQPLFALLTFLHSLVNNWGVAII 368 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 L T+ VK + L KKQY S A M+N+ PK+ +L+++F Q + +AM++LY+ +N Sbjct: 369 LITIVVKGAMYWLTKKQYESMARMRNLAPKMQQLKDRFGDD-RQKMSQAMMELYRKEKVN 427 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P+ GC P+LLQ+P+F A+Y V+ S+E+RHA F WI DL+ DP + Sbjct: 428 PMGGCLPLLLQMPIFLALYWVLMESVELRHADFVLWITDLSTKDPYFVL----------- 476 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 PI+ SM++ K+ P D Q I+ WMPV FPAGL++YW Sbjct: 477 --------PILTGASMYLLQKLQPTTITDPMQQKIMQWMPVAMSVFFLWFPAGLVLYWLV 528 Query: 545 SNVISIVQQAVI 556 SNVI++VQ +I Sbjct: 529 SNVITLVQAKMI 540 >gi|85712624|ref|ZP_01043671.1| Preprotein translocase subunit YidC [Idiomarina baltica OS145] gi|85693615|gb|EAQ31566.1| Preprotein translocase subunit YidC [Idiomarina baltica OS145] Length = 554 Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 111/328 (33%), Positives = 183/328 (55%), Gaps = 33/328 (10%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA-- 291 + D+ + +S ++ W+ + Y+ + ++P++ Q K+ S QA Sbjct: 245 FDDMREKKLSVTTQTG-WVSMLQHYFVAAWVPTQT----QQNKFYSQVTPSNQAVIGVLY 299 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 T+ PG S T +F G K+ + P ++ +D+G+ +++A+P+F L+ Sbjct: 300 PSTTVQPGASKTIDATIFVGPKDQDAMAK-----VAPYLDLTVDYGFLWWLAQPIFKLLQ 354 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + V N+G+AI+L TV +K L FPL K QYVS A M+ +QPK+ LRE++ Q + Sbjct: 355 FLQSFVINWGLAIILITVIIKALLFPLTKAQYVSMAKMRLLQPKMKSLRERYGDD-RQKM 413 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM++LYK +NPL GC P+LLQ+P+F ++Y V+ S+E+RH+ F WI+DL+ D Sbjct: 414 GQAMMKLYKEEKVNPLGGCLPMLLQLPIFLSLYWVLLESVELRHSSFVFWIQDLSTKD-- 471 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFA 530 P+Y I PI+M +SMF+ ++ P PA D Q + +MPV+F Sbjct: 472 ---------PYY--------ILPILMGISMFVMQRLQPTPATDPMQQKLFQYMPVIFTVF 514 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++YW SN+I+I Q +I K Sbjct: 515 FLWFPSGLVLYWLVSNLITITQMLIIYK 542 >gi|163803611|ref|ZP_02197477.1| putative inner membrane protein translocase component YidC [Vibrio sp. AND4] gi|159172605|gb|EDP57463.1| putative inner membrane protein translocase component YidC [Vibrio sp. AND4] Length = 540 Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 151/494 (30%), Positives = 242/494 (48%), Gaps = 55/494 (11%) Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 SI+ G NL Y ++ S+ P V L +TK F + I+L ++N Sbjct: 76 SIDTLGGDVVHANLNKYSAELDSSDPFVLL---KDTKGHQFIAQSGLVGPQGIDLSSTNR 132 Query: 141 VWNLISGKILT-PTTPIKLVFK---NANNI------LFER-TISLDEHYLFKIVDTVTNN 189 +S T P +L AN I +FER + +L+ Y IV+ NN Sbjct: 133 PSYKVSADSFTLPDGQDELRVPMTFTANGIEYIKTYVFERGSYALNVEY--DIVNNSGNN 190 Query: 190 SIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHES 248 + + R +M T+ G D + + D++ ++S N + Sbjct: 191 ATLGMYAHLRQNLMDDGGSITMPTY---RGGAYSTEDVRYKKYSFDDMQDRNLSINLADG 247 Query: 249 NSWLGISDKYWASVFIPSKE--TSFHSQ-FKYLSDGHARYQAKFSANEITILPGKSITTT 305 W + Y+A+ +IP E T+ +++ L D R K TI G T Sbjct: 248 KGWAAMIQHYFAAAWIPRDEPGTNLYTRVIGNLGDIGVRIPNK------TIATGDQTTFK 301 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 L+ G K E P ++++D+GW +F+AKP+ L+++ + VGN+GIAI+ Sbjct: 302 ATLWVGPK-----LQNEMAAVAPNLDLVVDYGWLWFLAKPLHSLLAFIQSFVGNWGIAIV 356 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + M++LYK +N Sbjct: 357 CLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMSQEMMELYKKEKVN 415 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC P++LQ+P+F ++Y + S+E+RH+PF+GWI DL+A D P+Y Sbjct: 416 PLGGCLPLVLQMPIFISLYWALMESVELRHSPFFGWIHDLSAQD-----------PYY-- 462 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I P++M +SMFI KMSP D Q I+ +MP++F F FP+GL++YW Sbjct: 463 ------ILPVLMGVSMFIIQKMSPTTVTDPMQQKIMTFMPLMFTFFFFMFPSGLVLYWLV 516 Query: 545 SNVISIVQQAVIMK 558 SN+++++QQ +I K Sbjct: 517 SNIVTLIQQTLIYK 530 >gi|30065013|ref|NP_839184.1| putative inner membrane protein translocase component YidC [Shigella flexneri 2a str. 2457T] gi|30043274|gb|AAP18995.1| 60 KD inner-membrane protein [Shigella flexneri 2a str. 2457T] Length = 548 Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 106/334 (31%), Positives = 186/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGT--NNFYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++M KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMLFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|313647713|gb|EFS12161.1| inner membrane protein oxaA [Shigella flexneri 2a str. 2457T] Length = 531 Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 106/334 (31%), Positives = 186/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 210 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGT--NNFYTANLGNGIV 267 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 268 AIGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 322 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 323 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 382 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 383 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 441 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++M KMSP D Q I+ +MP Sbjct: 442 SAQD-----------PYY--------ILPILMGVTMLFIQKMSPTTVTDPMQQKIMTFMP 482 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 483 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 516 >gi|157164729|ref|YP_001466647.1| putative inner membrane protein translocase component YidC [Campylobacter concisus 13826] gi|157101469|gb|EAT97433.2| inner membrane protein OxaA [Campylobacter concisus 13826] Length = 517 Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 127/391 (32%), Positives = 201/391 (51%), Gaps = 61/391 (15%) Query: 185 TVTNNSIDQIRFSPRGRIMRH---------------KPQTATNTFGVQEGFIAVLGDKSL 229 TVT N I+F P GR +P A +++ V G + D SL Sbjct: 160 TVTKN----IKFYPNGRYEVEVNLSKSVDYFITPGFRPNIAIDSYTVH-GVMLRNTDDSL 214 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 D + + N+ + + SD+Y+ ++F SF+ F+ + D A Sbjct: 215 --NIIEDGDAKEVKNYANT-TIAAASDRYYTALFY-----SFNKPFEAVVDKDANNN--- 263 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 P + T + L GA P H + R +I++GWF FIAKPMF Sbjct: 264 --------PIVFVKTNDSLKLGAYIGPKEHKILSSMD-ERLNDVIEYGWFTFIAKPMFAF 314 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +++ +N +GN+G AI++ T+ ++++ FPL K +S +K + PK+ E++ K+K Q Sbjct: 315 LNFLHNYIGNWGWAIVVLTLVIRIVLFPLTYKGMLSMNKLKELAPKVKEIQTKYKDDK-Q 373 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 +Q M++LYK H NP+ GC PILLQIPVFFAIY+V+ ++E++ AP+ WI DL+ D Sbjct: 374 KMQVHMMELYKKHGANPMGGCLPILLQIPVFFAIYRVLLNAIELKGAPWILWIHDLSVMD 433 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P Y + PI+M L+MF+Q K++P D Q ++ ++P++F Sbjct: 434 P------------YF-------VLPILMGLTMFLQQKLTPTTFTDPMQEKVMKFLPLIFT 474 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 F +FPAGL +YW +NV S+VQQ + K+ Sbjct: 475 FFFVTFPAGLTLYWFVNNVCSVVQQVFVNKL 505 >gi|220905229|ref|YP_002480541.1| YidC translocase/secretase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869528|gb|ACL49863.1| YidC translocase/secretase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 548 Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 141/489 (28%), Positives = 234/489 (47%), Gaps = 55/489 (11%) Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145 G L+ Y + ++++SP V ++ P K+A A L V N + S W++ Sbjct: 90 GGALRSFKLKKYQVGLAADSPQVNMVDP---KSAQVAPLGLVI---NSQPSWSTGQWSMD 143 Query: 146 SGK-----ILTPTTPIKLVFKNAN-NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPR 199 +G+ ++LV + N ++ E T S + + + + V N Q R Sbjct: 144 TGENGLALEQGQQGTLRLVGEVDNLRVVREMTFSATNYLIREKIRVV--NQTQQARSV-- 199 Query: 200 GRIMRHKPQTATNTFGVQEGFIAVL--GDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257 R+ A+N G + + V D SL E+ + +S+ W G Sbjct: 200 -RVSYTVAADASNAAGDRYDAMRVAWDNDGSLKEESSASTLESTGVQAVGKIYWAGAMST 258 Query: 258 YWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317 Y+ + +P + + + Y+ E + PG+ + + G K Sbjct: 259 YFLAAVLPGDVNNVTVKGVMQQN---VYRTAVEEQETLLGPGQEKELSVSYWVGPKV--- 312 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 E P+ +D G+F+ IAK + L+ +F+ V N+G+AI+L TV +K F+P Sbjct: 313 --RSELQAVSPQLAKSVDLGFFHIIAKGLLWLLEFFHKYVHNWGLAIILLTVLIKAAFWP 370 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 L K Y S MK +QP + E+REKFK + Q + K ++ LYKT+ +NP +GC PIL+Q+ Sbjct: 371 LTAKSYASMEKMKKLQPHMMEIREKFKDNKEQ-MNKEVMALYKTYGVNPASGCVPILIQL 429 Query: 438 PVFFAIYKVISISLEMRHAPFWG--------WIKDLAAADPTNIFTLFGILPFYLPGFMH 489 PVFF +Y+ + S+E+RHAPF W+ DL+ DP I Sbjct: 430 PVFFGLYQALLTSIELRHAPFITYLPGTDILWLADLSTKDPLYIT--------------- 474 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 P+IM L+MF+Q +MSPP D Q I+ ++P++F +FP+GL++YW +NV+S Sbjct: 475 ----PVIMGLTMFLQQRMSPPATDPTQQKIMMFLPLIFTALFLNFPSGLVLYWLVNNVLS 530 Query: 550 IVQQAVIMK 558 I QQ ++++ Sbjct: 531 IAQQQMMIR 539 >gi|82779235|ref|YP_405584.1| putative inner membrane protein translocase component YidC [Shigella dysenteriae Sd197] gi|123561063|sp|Q329B2|OXAA_SHIDS RecName: Full=Inner membrane protein oxaA gi|81243383|gb|ABB64093.1| 60 KD inner-membrane protein [Shigella dysenteriae Sd197] Length = 548 Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 107/334 (32%), Positives = 186/334 (55%), Gaps = 28/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ + P + + + L +G A Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWSPHNDGTNNFYTANLGNGIAA- 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G P I +A P ++ +D+GW +FI++P Sbjct: 286 -IGYKSQPVLVQPGQTGAMNSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DKQRISQE-MMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A D P+Y I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQD-----------PYY--------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|319760162|ref|YP_004124100.1| inner membrane protein [Candidatus Blochmannia vafer str. BVAF] gi|318038876|gb|ADV33426.1| inner membrane protein [Candidatus Blochmannia vafer str. BVAF] Length = 650 Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 162/585 (27%), Positives = 278/585 (47%), Gaps = 59/585 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV--YPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N+F+ I L +I WQ + + Y + +NN + N +++ +S I Sbjct: 89 MDSQRNFFIGIFL-IISFILWQTWEIEHYYQKTHLNNLKDNYTNSYLNSKISSSTPPNNI 147 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + ++ + IN G +D L Y +++S P+ L S + Sbjct: 148 QKNIVHSENKDIITVQTDVFLLKINKYGGNIEDAYLLKYLDNLNSQQPLRLLNSSKKYQY 207 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGK---ILTP---TTPIKLVFKNANNILFERTI 172 ++EL + +N E ++ I+ + IL T L+ + N I++ + Sbjct: 208 QTYSELTTNTNLSNEENQCKKFLYTDINNQNKYILKNNKNTLQFTLMHYDPNGIIYTKQY 267 Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHK-------PQTATNTFGVQEGFIAVL 224 + Y I T+ N SI I G +++ + + E + Sbjct: 268 LFHRNNYFITINHTIDNTSIHSIYTRILGNLVQSQYYLPIPLKNNKNKIYLSSEYEGSAY 327 Query: 225 GDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETS--FHSQF---KY 277 QKYS D++ +++ N H W+ + KY+ ++P + FH+ + Y Sbjct: 328 STNKEKYQKYSFNDMKHNNL-NIHSIGGWVALLQKYFVVAWLPITPVNNVFHTTYIDDHY 386 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 +S G F ++ I I PG+ L+ G P I + K P ++ID+G Sbjct: 387 MSIG-------FQSDLIQIPPGQKKEFQTILWIG----PKIQDHIKSTIAPNLNLVIDYG 435 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WF+FI++P+F L+ +N + N+G++I+L T+ ++++ +PL K QY S A M+ +QPK+ Sbjct: 436 WFWFISQPLFKLLQLIHNYINNWGVSIILITIIIRIIMYPLTKAQYTSMAKMRMLQPKLV 495 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ++EK+K + Q QK I+LYK +NPL GC P+L+Q+P+F A+Y ++S S+E+RHA Sbjct: 496 LIQEKYKHNKYQCHQKT-IELYKKEKVNPLGGCLPLLIQMPIFLALYYMLSNSVELRHAK 554 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQ 516 F WI DL+ D P+Y I PIIM ++M + K++P D Q Sbjct: 555 FMLWINDLSTQD-----------PYY--------ILPIIMGITMLLIQKLAPTTITDPTQ 595 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 I+ M F FP+GL++Y+ SNVI+I+QQ +I HG Sbjct: 596 KKIMTIMLTAFTVFFLWFPSGLVLYYIISNVITIIQQHII--YHG 638 >gi|304313414|ref|YP_003813012.1| Preprotein translocase subunit [gamma proteobacterium HdN1] gi|301799147|emb|CBL47390.1| Preprotein translocase subunit [gamma proteobacterium HdN1] Length = 568 Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 147/528 (27%), Positives = 251/528 (47%), Gaps = 58/528 (10%) Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 L+ D A + ++ L I+ G + L+ Y + + +++L+ Sbjct: 74 ALVSDAQSAKKAGGLIRVETDVLSVEISTLGGDVVSVRLKAYPISIEDKGTPISILA-ET 132 Query: 116 TKNAYFAELDYVSTANNIELPNSN-----------TVWNLISGKILTPTTPIKLVFKNAN 164 + Y A+ S I P+SN T + L ++ P L F + N Sbjct: 133 AQTTYVAQ----SGLAGINGPDSNAAGRPQYTTDQTEYELKGDHLVVP-----LHFVDEN 183 Query: 165 NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTA---TNTFGVQEG 219 + +T + Y+ K V N S + +I R + P T FG+ Sbjct: 184 GVKVTKTFEFAKGSYVIKNRYDVHNTSSQPWTAAFFAQIKRDNSPDPGVQHTTGFGLPT- 242 Query: 220 FIAVL---GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 F+ V +K ++K+ + K+ + + W+ I Y+ + +IP + + Q+ Sbjct: 243 FLGVAYWSPEKPYNKEKFDALVKTPLDLKGVTGGWMAIIQHYFLAAWIPDQ----NQQYD 298 Query: 277 YLSDG-HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 Y + A+ + +T+ PG S L+ G K T+ E + ++++D Sbjct: 299 YSTAAVKGNTIARIVGHSVTVAPGASQDYQASLYVGPKIQKTL---EALVPGKGLDLVVD 355 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G +FI+K +F L+S F+ L N+G++I+L TV +K LFF + Y S A M+ +QP Sbjct: 356 YGPLFFISKILFWLLSTFHALTANWGVSIILLTVTIKALFFYPSAISYRSMAKMRTVQPA 415 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + LRE++ Q L + M++LY+ + INPL GC PIL+Q+PVF A+Y + S+E+R Sbjct: 416 LLRLREQYADDR-QKLSQEMMKLYRDNKINPLGGCLPILIQMPVFLALYWALLESVELRQ 474 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 APF+GW+ DL+ DP I P+IM +M+IQ ++P P D Sbjct: 475 APFFGWLTDLSVMDPYFIL-------------------PLIMGGTMYIQTALNPAPPDPM 515 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 QA ++ +MP++F FPAGL++YW +N +SI+QQ +I + AE Sbjct: 516 QAKLMKFMPIIFTVMFLWFPAGLVVYWITNNSLSILQQWIITRKIEAE 563 >gi|298528960|ref|ZP_07016363.1| membrane protein insertase, YidC/Oxa1 family [Desulfonatronospira thiodismutans ASO3-1] gi|298510396|gb|EFI34299.1| membrane protein insertase, YidC/Oxa1 family [Desulfonatronospira thiodismutans ASO3-1] Length = 598 Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 110/318 (34%), Positives = 176/318 (55%), Gaps = 40/318 (12%) Query: 250 SWLGISDKYWASVFIP-SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL 308 W GI D Y+ +P S + + G +Q S + + + P S T Sbjct: 252 QWAGIVDHYFMLTLVPASPDVQLQAHH-----GDDLFQISLSKS-MYLEPETSQTMDQIY 305 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + G K+ + A E I +GWF +A+P+ ++ +FY N+G+AI+L T Sbjct: 306 YLGPKDREYLEG-----APNHLEESIYYGWFNLLAQPLMKVLHFFYQYTANYGVAILLLT 360 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +K++F+PL+ K Y S MK +QP + ++REK K + + + +++LYKT+ +NPL Sbjct: 361 LVIKIIFWPLSHKSYKSMNQMKKLQPMMTKIREKHKDD-RKAMNEEIMRLYKTYKVNPLG 419 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIKDLAAADPTNIFTLFGIL 480 GC PIL+QIPVF A+Y+ + S+E+RHAPF W+ DL+A D Sbjct: 420 GCLPILVQIPVFIALYQGLLGSVELRHAPFISHIPFTDIVWLADLSARD----------- 468 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 PFY I P++M +MF+Q +M+P P D QA I+ ++P+VF+F +FP+GL+I Sbjct: 469 PFY--------ITPLLMGATMFLQQRMAPAPGDPLQARIMQFLPLVFIFIFITFPSGLVI 520 Query: 541 YWSWSNVISIVQQAVIMK 558 YW +NV+SI QQ +++ Sbjct: 521 YWLANNVLSIGQQWYMLR 538 >gi|114565213|ref|YP_752727.1| 60 kDa inner membrane insertion protein [Shewanella frigidimarina NCIMB 400] gi|122298224|sp|Q07VS6|OXAA_SHEFN RecName: Full=Inner membrane protein oxaA gi|114336506|gb|ABI73888.1| protein translocase subunit yidC [Shewanella frigidimarina NCIMB 400] Length = 542 Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 108/310 (34%), Positives = 171/310 (55%), Gaps = 29/310 (9%) Query: 249 NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL 308 W + Y+ S ++P S ++ F +S G F I PG + + Sbjct: 250 GGWAAMLQHYFVSAWVPPATDS-NTIFSSMSAG-GMANIGFRGAVYDIAPGATQEINSQF 307 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + G K + + L +++D+G+ +++A P+ L+ ++ + VGN+G+AI+L T Sbjct: 308 YVGPKNQKELSAISETL-----NLVVDYGFLWWLAIPIHWLLMFYQSFVGNWGVAIILIT 362 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + V+ +PL KKQY S A M+N+QPK+ E++E+F Q + +AM++LYK +NP+ Sbjct: 363 LTVRGGLYPLTKKQYTSMAKMRNLQPKLTEMKERFGDDR-QKMGQAMMELYKKEKVNPMG 421 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ D P+Y Sbjct: 422 GCLPILLQMPIFIALYWVLLESYELRHAPFMLWITDLSVQD-----------PYY----- 465 Query: 489 HVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 + P++M LSMF+ KM P P D Q ++ WMPV+F FPAGL++YW N Sbjct: 466 ---VLPLLMGLSMFLMQKMQPVAPTMDPMQVKMMQWMPVIFTVFFLWFPAGLVLYWLVGN 522 Query: 547 VISIVQQAVI 556 +++I QQ +I Sbjct: 523 LVAITQQKII 532 >gi|145301204|ref|YP_001144045.1| 60 kDa inner membrane protein [Aeromonas salmonicida subsp. salmonicida A449] gi|166975848|sp|A4STS5|OXAA_AERS4 RecName: Full=Inner membrane protein oxaA gi|142853976|gb|ABO92297.1| 60 kDa inner membrane protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 548 Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 129/414 (31%), Positives = 209/414 (50%), Gaps = 42/414 (10%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 + + + ++ ++F + L Y + + N S + ++ G++ QT T T Sbjct: 155 VPMTWTDSKGVVFTKEFVLKRGDYAIGVDYKIDNKSAEPVQVQFYGQL----KQTVT-TP 209 Query: 215 GVQEGFIAVL-----GDKSLVEQKYS----DIEKSSISNFHESNSWLGISDKYWASVFIP 265 QEG V G S E +Y D K + N W+ + Y+ S + P Sbjct: 210 KDQEGHAMVASAYRGGAFSSEESRYKKYTFDEMKDADLNKTTKGGWVAMLQHYFVSAWAP 269 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + + + +S + + G + + A + + G+ T+ L+ G P + + Sbjct: 270 NADDT-NSFYSRVIPGKDQAIIGYKAPLVDVAAGQQAEVTSKLWVG----PKLQDQMAKV 324 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 A ++ +D+GW +FIA+P+ L++ F V N+G+AI++ T+ V+ + FPL K QY S Sbjct: 325 A-NHLDLTVDYGWLWFIAQPLHWLLTVFQGFVHNWGVAIIMLTLLVRGIMFPLTKAQYTS 383 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A M+ +QPK+ L+E+F Q + + M++LYK +NPL GC PIL+Q+P+F A+Y Sbjct: 384 MAKMRMLQPKLAALKERFSDD-RQKMSQGMMELYKKEKVNPLGGCLPILVQMPIFIALYW 442 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + S+E+RHAPF WI DL+ DP F L PI+M SM+ Sbjct: 443 ALMESVELRHAPFALWITDLSVKDP--FFVL-----------------PILMGASMWYLQ 483 Query: 506 KMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 KMSP D Q ++ +MP++F F FPAGL +YW SNVISI QQ +I + Sbjct: 484 KMSPTTITDPMQQKVMQFMPIIFTFMFLWFPAGLTLYWLVSNVISITQQTIIYR 537 >gi|32490762|ref|NP_871016.1| hypothetical protein WGLp013 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|38502995|sp|Q8D3I8|OXAA_WIGBR RecName: Full=Membrane protein oxaA gi|25165968|dbj|BAC24159.1| yidC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 540 Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 138/494 (27%), Positives = 242/494 (48%), Gaps = 42/494 (8%) Query: 78 LIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPN 137 I IN G ++ +LR Y + +N P+ L +KN + T N+ ++ N Sbjct: 67 FILKINTYGGDIEEASLRTYLSNTKNNLPLKIL---DRSKNFIYKLKSGFITKNDHDINN 123 Query: 138 SNTVWNLISGKIL------TPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNS 190 + N IS K L + + L + N + + + ++ + KI ++ N + Sbjct: 124 LIHIPNFISDKKLYILEDNSDYLQVPLFYNGENGLKYVKNFIFKKNSFSLKINYSIKNTN 183 Query: 191 IDQIRFSPRGRIMRH-KPQTATN----TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 D++ G++ + K Q N F G + + +S+I N Sbjct: 184 KDKMEMMFFGQLEQSIKDQEINNGYNFNFHTYRGAAYSSDNNKYKKYDFSEISNDKNLNV 243 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 SN W+ + +Y+ +IP E + K + + F + +I + Sbjct: 244 ITSNGWIAMLQQYFIVAWIPKIENKYKFYTKNIPKDE-KVSIGFQSELFSIDQEEEKNIE 302 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + L+ G K ++ + +L + +D+GW +FIA+P+ L+ + Y + N+GI+I+ Sbjct: 303 STLWIGPKLQDKMYEVDANLGLT-----VDYGWLWFIAQPLLQLLKFIYKYINNWGISII 357 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T V+ + FPL K QY S A M+ +QPKI E++ KF + K M+ LYK +N Sbjct: 358 IITFMVRGIMFPLTKAQYTSMAKMRILQPKIIEIKNKFSNDKKRQ-SKEMMSLYKKQKVN 416 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC P+++Q+P+F A+Y ++S S+E+RHA F WI DL++ D P+Y Sbjct: 417 PLGGCMPLIIQMPIFLALYYMLSGSVELRHAHFVLWINDLSSKD-----------PYY-- 463 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I PIIM ++MF+ K+SP +D Q I+++MP++F FP+GL++Y+ Sbjct: 464 ------ILPIIMGITMFLIQKISPSSISDPVQKKIVSFMPLIFTIFFLWFPSGLVLYYII 517 Query: 545 SNVISIVQQAVIMK 558 SN+++I+QQ +I K Sbjct: 518 SNLVTIIQQYIIYK 531 >gi|46579490|ref|YP_010298.1| inner membrane protein, 60 kDa [Desulfovibrio vulgaris str. Hildenborough] gi|120602960|ref|YP_967360.1| 60 kDa inner membrane insertion protein [Desulfovibrio vulgaris DP4] gi|81699125|sp|Q72D53|OXAA_DESVH RecName: Full=Inner membrane protein oxaA gi|259515685|sp|A1VER7|OXAA_DESVV RecName: Full=Inner membrane protein oxaA gi|46448904|gb|AAS95557.1| inner membrane protein, 60 kDa [Desulfovibrio vulgaris str. Hildenborough] gi|120563189|gb|ABM28933.1| protein translocase subunit yidC [Desulfovibrio vulgaris DP4] gi|311233305|gb|ADP86159.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio vulgaris RCH1] Length = 534 Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 164/580 (28%), Positives = 270/580 (46%), Gaps = 73/580 (12%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVY----PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 N +A+ LS I++ W Y P+ E+K + P+ V ++ AV Sbjct: 2 ENKRAIIAVVLSFIVLVGWGYLSEYMGWTPK-SVPATEQKTAASAPAPSVVTSAPEAV-T 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + S V + P ++ G L YH+ + ++ V L+ S + Sbjct: 60 PAPAFSPSTGHEVTVTTPLYKAVLHSGGGVLRQFMLSRYHMGIDRDAAPVNLIESSAIRV 119 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 A L N WN +G+ + L + F S+D Sbjct: 120 APLGLLV-----------NGQPSWN--TGQWAFEGGDLNLADGQTGTLRF--VGSVDGLR 164 Query: 179 LFKIVDTVTNNSI--DQIRFSPRG---RIMRHKPQTATNTFGVQEG-----FIAVLGDKS 228 + + ++ ++ + +++ +P G R R T + E +A D S Sbjct: 165 VVRELEFHADSYLVTEKLHLAPEGDAPRTARVGFTLGTTSLTPGESQYNLTRVAWFADGS 224 Query: 229 LVEQKYS-DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 E+ + D+EK + S W G+ Y+ + P K+T + K +G Y+ Sbjct: 225 FSEKSSTGDLEKGVL--IDGSIDWAGVMSNYFLAAVAP-KDT--RAVLKGKLEGGV-YRV 278 Query: 288 KFSANEITILPGKS-ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + PG S + N+ F G KE ++ +L ID GWF FIA+P+ Sbjct: 279 AVERPDQMVNPGNSDVIVCNYWF-GPKERDLLNAAPNNLG-----KAIDLGWFGFIARPL 332 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 L+ +FY VGN+G AI+L T+ +KL+F+PL+ K Y S MK +QP + ++REK Sbjct: 333 VTLLDFFYKYVGNYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQPMLAKVREKHADD 392 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG------ 460 + + + M++LYKT+ +NP GC P+L+QIPVFF +Y+ + ++E+RHAPF Sbjct: 393 -REKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHAPFIAHVPFTD 451 Query: 461 --WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 W+ DL+A D PFY + P++M +MF+Q K++PP D QA Sbjct: 452 IVWLADLSAKD-----------PFY--------VTPLVMGATMFLQQKLTPPAGDPTQAK 492 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ +MPVVF F +FP+GL++YW +NV+SI QQ I++ Sbjct: 493 VMMFMPVVFTFLFLNFPSGLVVYWLCNNVLSIAQQWWILR 532 >gi|294341966|emb|CAZ90395.1| Inner membrane protein oxaA [Thiomonas sp. 3As] Length = 565 Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 137/417 (32%), Positives = 209/417 (50%), Gaps = 33/417 (7%) Query: 153 TTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 T +KLV + I ERT + + Y+ + +T+TN + +++R A Sbjct: 168 TLQVKLVSPDLGGIKLERTYTFTRDSYVVNVQNTITNTGSVAVAPQMYMQLVRDGNTPAG 227 Query: 212 NTFGVQEGFIA-VLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSK- 267 + + D + QK+ D++ + +S W+ + Y+ S ++P Sbjct: 228 DESHFYHTYTGPAYYDNANKFQKFEFKDLKTNEAPKKADSG-WVAMIQHYFVSAWVPEPY 286 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 E S + L D Y I PGKSITT LF G P + LA Sbjct: 287 EGSRDLYTRKLGDN--LYAVGVIQPLSQIAPGKSITTDAKLFVG----PELESTLGALA- 339 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P E++ D+GW +AKP+F L+ + +V N+G +I++ T+ +KL FFPL Y S A Sbjct: 340 PGLELVKDYGWVTILAKPIFWLLEMIHKVVQNWGWSIIVLTLLIKLAFFPLTAASYKSMA 399 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 MK + P+I+ LRE +K + + +AM++LY+ INPL GC PI++QIPVF A+Y V+ Sbjct: 400 RMKAVGPRINALRESYKGDQAK-MNQAMVELYRKEKINPLGGCLPIVIQIPVFIALYWVL 458 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+E+R AP+ WI DL+A D P+Y I P IM+ + F+Q+K+ Sbjct: 459 LSSVELRGAPWILWIHDLSAKD-----------PYY--------ILPAIMTATSFLQVKL 499 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +P P D QA ++ MP F FPAGL++YW +N SI QQ I K G + Sbjct: 500 NPTPPDPMQARLMWIMPAAFSIMFFFFPAGLVLYWLTNNTTSIAQQWFINKKMGVGV 556 >gi|296137608|ref|YP_003644850.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Thiomonas intermedia K12] gi|295797730|gb|ADG32520.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Thiomonas intermedia K12] Length = 565 Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 137/417 (32%), Positives = 209/417 (50%), Gaps = 33/417 (7%) Query: 153 TTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 T +KLV + I ERT + + Y+ + +T+TN + +++R A Sbjct: 168 TLQVKLVSPDLGGIKLERTYTFTRDSYVVNVQNTITNTGSVAVAPQMYMQLVRDGNTPAG 227 Query: 212 NTFGVQEGFIA-VLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSK- 267 + + D + QK+ D++ + +S W+ + Y+ S ++P Sbjct: 228 DESHFYHTYTGPAYYDNANKFQKFEFKDLKTNEAPKKADSG-WVAMIQHYFVSAWVPEPY 286 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 E S + L D Y I PGKSITT LF G P + LA Sbjct: 287 EGSRDLYTRKLGDN--LYAVGVIQPLPQIAPGKSITTDAKLFVG----PELESTLGALA- 339 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P E++ D+GW +AKP+F L+ + +V N+G +I++ T+ +KL FFPL Y S A Sbjct: 340 PGLELVKDYGWVTILAKPIFWLLEMIHKVVQNWGWSIIVLTLLIKLAFFPLTAASYKSMA 399 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 MK + P+I+ LRE +K + + +AM++LY+ INPL GC PI++QIPVF A+Y V+ Sbjct: 400 RMKAVGPRINALRESYKGDQAK-MNQAMVELYRKEKINPLGGCLPIVIQIPVFIALYWVL 458 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+E+R AP+ WI DL+A D P+Y I P IM+ + F+Q+K+ Sbjct: 459 LSSVELRGAPWILWIHDLSAKD-----------PYY--------ILPAIMTATSFLQVKL 499 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +P P D QA ++ MP F FPAGL++YW +N SI QQ I K G + Sbjct: 500 NPTPPDPMQARLMWIMPAAFSIMFFFFPAGLVLYWLTNNTTSIAQQWFINKKMGVGV 556 >gi|85858985|ref|YP_461187.1| 60 kDa inner membrane protein [Syntrophus aciditrophicus SB] gi|123516274|sp|Q2LSF9|OXAA_SYNAS RecName: Full=Inner membrane protein oxaA gi|85722076|gb|ABC77019.1| 60 kDa inner membrane protein [Syntrophus aciditrophicus SB] Length = 544 Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 119/330 (36%), Positives = 182/330 (55%), Gaps = 34/330 (10%) Query: 236 DIEKSSISNFHESNS------WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 D+E+ ++ S W G KY+ + IP + + D Sbjct: 240 DVEREKVTKMETPKSLGPDVSWGGFESKYFIAAMIPQNPS--LTSLSLSKDSSNMVSTSL 297 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG-WFYFIAKPMFM 348 + I PG++ T LF G K++ + L E ID+G W ++A P+ + Sbjct: 298 KGPKNIIPPGQAGFFTYKLFLGPKDYNILKAQGVGL-----ENAIDFGSWLKWLAMPLLL 352 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 + + YN V N+GIAI++ T+ +K+LF+PL K Y S M+ +QPK+ ELREK+K Sbjct: 353 SLKFLYNYVHNYGIAIIILTILIKILFWPLGNKSYKSMKEMQKLQPKMLELREKYKNDKA 412 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 ++ Q+ M LYK + +NP+ GC P+++QIPVFF +YK + ++E+RH+PF+ WI+DL+A Sbjct: 413 RLSQETM-ALYKAYKVNPMGGCLPMIIQIPVFFGLYKALLYAIELRHSPFFLWIQDLSAK 471 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP +Y I PIIM +MF+Q KM+P D QA I+ WMPV+F Sbjct: 472 DP-----------YY--------ITPIIMGATMFLQQKMTPVSGDPTQAKIMLWMPVIFT 512 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F +FP+GL+IYW ++N++SI QQ I K Sbjct: 513 FMFLNFPSGLVIYWLFNNILSIGQQYYINK 542 >gi|71891805|ref|YP_277534.1| hypothetical protein BPEN_012 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795911|gb|AAZ40662.1| putative protein [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 638 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 170/589 (28%), Positives = 286/589 (48%), Gaps = 82/589 (13%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N+FV + +S I+ WQ Y ++R NIQ + N +N+Y + Sbjct: 89 MDSQRNFFVIAFLIMSFILWQIWQTEY---------HQRTNIQKI---NIHENTYPLIRS 136 Query: 59 DDR---AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 +D + + +K L+ IN G ++ L Y ++ S P LLS S Sbjct: 137 EDNDAIKYVHHTNHVITVKTDVLLLKINTYGGDIEEAYLVNYLENLHSKEPF-HLLSTSQ 195 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF---KNANNILFERT- 171 + N L N + K + T K ++ KN N + T Sbjct: 196 A----------FTYQTNSGLITENIPGRSYNKKFIYTTATDKSLYIIPKNENKLQLTLTH 245 Query: 172 -----ISLDEHYLFKIVD-------TVTNNSIDQIRFSPRGRIMR--HKPQTATNT---- 213 I+ ++Y+F D TV N S ++ G I++ H P++ N+ Sbjct: 246 YASDGITYTKNYIFHRNDYSIYVFYTVNNMSTYPLKIKLFGNIVQSEHYPKSHNNSDNGD 305 Query: 214 -FGVQEGFIAVLGDKSLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 F + + QKYS DI+ ++ + S W+ +S KY+A+ +IP + + Sbjct: 306 NFPLYSYRGSAYSTDKKKYQKYSFKDIKNMNLK-INTSKGWIAMSQKYFATAWIPLTQGN 364 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 Y ++ A F +N I + G++ T + L+ G P I K +A P Sbjct: 365 NTFYTTYHNNNSA--SIGFQSNSIDLPIGETGTFQSILWIG----PKIQEKMKAIA-PNL 417 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++L+D+GW +FI++P+F L+S+ Y+ + N+GI+I++ T+ ++L+ +PL K QY S A ++ Sbjct: 418 DLLVDYGWLWFISQPLFKLLSFIYSYIENWGISIIIITLIIRLIMYPLTKAQYTSMAKIR 477 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QPK+ ++E++K Q QK I+LYK +NPL GC P+L+Q+P+F A+Y ++S S Sbjct: 478 MLQPKLSIIQEEYKHDKYQYHQKT-IELYKLEKVNPLGGCLPLLIQMPIFLALYYMLSGS 536 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+RHA F WI DL+A DP I PI+M ++MF KMSP Sbjct: 537 VELRHAAFAFWIHDLSAQDPYYIL-------------------PILMGITMFFIQKMSPT 577 Query: 511 P-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q ++ M ++F FP+GL++Y+ SN+I+I+QQ +I + Sbjct: 578 TITDAIQKKMMTIMLIIFTIFFLWFPSGLVLYYIASNIITIIQQYMIYQ 626 >gi|85060407|ref|YP_456109.1| putative inner membrane protein translocase component YidC [Sodalis glossinidius str. 'morsitans'] gi|84780927|dbj|BAE75704.1| putative preprotein translocase subunit [Sodalis glossinidius str. 'morsitans'] Length = 547 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 112/333 (33%), Positives = 184/333 (55%), Gaps = 37/333 (11%) Query: 232 QKYS--DIEKSSISNFHESNSWLGISDKYWASV---FIPSKETSFHSQFKYLSDGHARYQ 286 QKYS DI+ ++S E W+ + +Y+A+ F P K T + S G+ Sbjct: 231 QKYSFKDIKGENLSVSTEGG-WVAMLQQYFATAWVPFTPGKNTFYTSDL-----GNGLAA 284 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 F + +T+ G L+ G P I +A P ++ +D+GW +FI++P+ Sbjct: 285 VGFKSAPVTVAAGGQSELKATLWLG----PEIQDKMAAIA-PHLDLAVDYGWLWFISQPL 339 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 340 FKLLKFIHSYIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERLGDD 399 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+ Sbjct: 400 -KQRQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSIELRHAPFALWIHDLS 458 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A D P+Y I P++M ++MF KMSP D Q I+ +MPV Sbjct: 459 AQD-----------PYY--------ILPLLMGITMFFIQKMSPTTVTDLMQQKIMTFMPV 499 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 IFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 532 >gi|57242374|ref|ZP_00370313.1| 60 kDa inner-membrane protein [Campylobacter upsaliensis RM3195] gi|57017054|gb|EAL53836.1| 60 kDa inner-membrane protein [Campylobacter upsaliensis RM3195] Length = 537 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 99/256 (38%), Positives = 158/256 (61%), Gaps = 26/256 (10%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + GAKE + +K R E ++++GWF FIAKPM++ + + + +GN+G AI++ T Sbjct: 297 YIGAKEHEALRAIDK-----RLEDVVEFGWFTFIAKPMYVGLDFLFKHIGNWGWAIVVLT 351 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + V+++ FPL K +S +K++ PK+ E+RE++K PQ + M++LYK H NP++ Sbjct: 352 LIVRVILFPLTYKSMISMNKLKDLAPKMKEIRERYK-GDPQKMNMHMMELYKKHGANPMS 410 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC PILLQIP+FFAIY+V+ ++E++ AP+ WI+DL+A DP Sbjct: 411 GCLPILLQIPIFFAIYRVLFNAIELKDAPWIFWIQDLSAMDP------------------ 452 Query: 489 HVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 I PI+M +MF+Q ++P D QA I+ ++PV+F +FPAGL +YW +N+ Sbjct: 453 -YFILPILMGATMFLQQLITPMTIQDPLQAKIMKFLPVIFTIFFITFPAGLTLYWFINNL 511 Query: 548 ISIVQQAVIMKMHGAE 563 S++QQ +I KM E Sbjct: 512 CSLLQQWIINKMFEKE 527 >gi|119773151|ref|YP_925891.1| inner membrane protein, 60 kDa [Shewanella amazonensis SB2B] gi|166977413|sp|A1S1G5|OXAA_SHEAM RecName: Full=Inner membrane protein oxaA gi|119765651|gb|ABL98221.1| inner membrane protein, 60 kDa [Shewanella amazonensis SB2B] Length = 541 Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 114/332 (34%), Positives = 186/332 (56%), Gaps = 38/332 (11%) Query: 232 QKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPS---KETSFHSQFKYLSDGHARYQ 286 +KYS D+ K + W+ + Y+ S ++P+ K T F S + G A Sbjct: 231 EKYSFDDMGKKDLEE-PTLGGWVAMLQHYFVSAWVPAAADKNTLFTS---VSAGGLANIG 286 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 K S +++ PG + T + + G K+ + L +++D+G+ +++A P+ Sbjct: 287 FKGSVHDVA--PGATETISATFYVGPKDQAALSALSDTL-----NLVVDYGFLWWLAVPI 339 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 ++ +F +LV N+G+AI+L T+ V+ L +PL K QYVS A M+N+QPK+ +L+++F Sbjct: 340 HWILMFFQSLVHNWGVAIILVTLTVRGLLYPLTKAQYVSMAKMRNLQPKLQDLKDRFGDD 399 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI+DL+ Sbjct: 400 R-QKMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWIQDLS 458 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMP 524 D P+Y + P++M SM+ KM P P D Q +L WMP Sbjct: 459 VQD-----------PYY--------VLPLLMGASMWAMQKMQPMAPNMDPMQQKMLQWMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++F FPAGL++YW N+++I QQ +I Sbjct: 500 MIFTVFFLWFPAGLVLYWLVGNLVAITQQKII 531 >gi|264680932|ref|YP_003280842.1| inner membrane insertion protein [Comamonas testosteroni CNB-2] gi|262211448|gb|ACY35546.1| inner membrane insertion protein [Comamonas testosteroni CNB-2] Length = 570 Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 111/336 (33%), Positives = 184/336 (54%), Gaps = 33/336 (9%) Query: 232 QKYSDIEKSSISNFH------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 +KY +E I N SN ++ + Y+AS ++ + + + + D Y Sbjct: 245 KKYHKVEFKDIENGKAEVDKASSNGYVAMVQHYFASAWLLADGIQRDNFVRKVGDN--LY 302 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 T+ PG++ T ++ LF+G + P + P E++ D+GW +AKP Sbjct: 303 AVGMITPVGTVEPGQTKTVSSRLFSGPQVEPMLEKLS-----PGLELVKDYGWLTILAKP 357 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 ++ L+S + +GN+G +I+ V +K+ F+ L K Y S A MK I P+I E+RE+ K Sbjct: 358 LYWLLSELHKFIGNWGWSIVALVVLLKIAFYWLNAKAYSSMAKMKAINPRIQEMRERLKD 417 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 P Q +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+E+R+AP+ GWI DL Sbjct: 418 KPQQ-MQQEMMRIYREEKVNPMGGCLPIVIQIPVFMALYWVLQSSVEIRNAPWIGWIHDL 476 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 + D PF+ I P++M+LS +Q ++P P D QA ++ MP+ Sbjct: 477 SVPD-----------PFF--------ILPLLMTLSSLLQTALNPAPPDPMQAKMMWIMPL 517 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +F FP+GL++YW +N++SI QQ +I K G Sbjct: 518 MFSVMFFFFPSGLVLYWLTNNILSIAQQWIINKRMG 553 >gi|315638576|ref|ZP_07893750.1| inner membrane protein [Campylobacter upsaliensis JV21] gi|315481200|gb|EFU71830.1| inner membrane protein [Campylobacter upsaliensis JV21] Length = 537 Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 99/256 (38%), Positives = 158/256 (61%), Gaps = 26/256 (10%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + GAKE + +K R E ++++GWF FIAKPM++ + + + +GN+G AI++ T Sbjct: 297 YIGAKEHEALRAIDK-----RLEDVVEFGWFTFIAKPMYVGLDFLFKHIGNWGWAIVVLT 351 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + V+++ FPL K +S +K++ PK+ E+RE++K PQ + M++LYK H NP++ Sbjct: 352 LIVRVILFPLTYKSMISMNKLKDLAPKMKEIRERYK-GDPQKMNMHMMELYKKHGANPMS 410 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC PILLQIP+FFAIY+V+ ++E++ AP+ WI+DL+A DP Sbjct: 411 GCLPILLQIPIFFAIYRVLFNAIELKDAPWIFWIQDLSAMDP------------------ 452 Query: 489 HVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 I PI+M +MF+Q ++P D QA I+ ++PV+F +FPAGL +YW +N+ Sbjct: 453 -YFILPILMGATMFLQQLITPMTIQDPLQAKIMKFLPVIFTIFFITFPAGLTLYWFINNL 511 Query: 548 ISIVQQAVIMKMHGAE 563 S++QQ +I KM E Sbjct: 512 CSLLQQWIINKMFEKE 527 >gi|152990628|ref|YP_001356350.1| inner membrane protein translocase component YidC [Nitratiruptor sp. SB155-2] gi|151422489|dbj|BAF69993.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 528 Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 100/256 (39%), Positives = 154/256 (60%), Gaps = 26/256 (10%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + G KE+ T+ P +I++G+F FIAKPMF + Y+L+GN+G AI++ T Sbjct: 290 YFGPKEYETLKAIN-----PELTDVIEYGFFTFIAKPMFKALLALYHLIGNWGWAIVVLT 344 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + ++++ FPL K +S +K++ PKI EL++K+K P Q L M+QLYK H NP+ Sbjct: 345 IIIRIILFPLTLKGMLSMQKLKDLAPKIKELQQKYKGDP-QKLNAHMMQLYKKHGANPMG 403 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+LLQIPVFFAIY+V+ ++E++ AP+ WI DL++ DP I Sbjct: 404 GCLPMLLQIPVFFAIYRVLLNAIELKGAPWILWITDLSSKDPYFIL-------------- 449 Query: 489 HVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 P++M +M+I K++P D Q I W+P+VF F +FPAGL +YW +N+ Sbjct: 450 -----PVLMGATMYIHQKITPTTITDPMQKKIFEWLPIVFTFFFLTFPAGLTLYWFVNNI 504 Query: 548 ISIVQQAVIMKMHGAE 563 +SI+QQ ++ K+ A Sbjct: 505 LSIIQQLIVNKIFEAR 520 >gi|257455161|ref|ZP_05620399.1| inner membrane protein OxaA [Enhydrobacter aerosaccus SK60] gi|257447494|gb|EEV22499.1| inner membrane protein OxaA [Enhydrobacter aerosaccus SK60] Length = 563 Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 105/331 (31%), Positives = 194/331 (58%), Gaps = 32/331 (9%) Query: 231 EQKYSDIEKSSISNFHESNS---WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 +Q Y+ ++ + ++ +++S W+G+ Y+ + ++P T++ Y + + Sbjct: 246 DQPYNKLKFGNFNDGLKASSDKGWIGMVQHYFVTAWMPKDYTAYF----YSREAGKDHII 301 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F++N +++ P K +T T+ L+AG P I K LA + +D+G + I+K +F Sbjct: 302 GFTSNPVSVAPNKQVTLTSALYAG----PKIQTNLKPLA-EGLDKTVDYGILWPISKVLF 356 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ + ++GN+G +I++ T+ VK+ P+A K Y S A M+ + P++ L+E++ Sbjct: 357 WILDNVHKVLGNWGWSIIVLTLLVKIALMPIANKSYHSMAKMRAVAPRLQALKEEYGDDR 416 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 ++ Q+ M+++YK +NP+AGC P+LLQ+P+F A+Y V+ S+++RHAP+ GWI+DL++ Sbjct: 417 MRMSQE-MMRIYKEEKVNPMAGCLPVLLQMPIFLALYWVLVESVQLRHAPWIGWIRDLSS 475 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP LF I P+IM +MF Q ++P P D QA ++ +MP++F Sbjct: 476 MDP-----LF--------------ILPLIMGAAMFFQQMLNPQPQDPMQARVMKFMPIIF 516 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FPAGL++YW+ +N+ S+ QQ I K Sbjct: 517 TVFMLFFPAGLVLYWTVNNLFSMAQQYFINK 547 >gi|89092261|ref|ZP_01165215.1| inner membrane protein, 60 kDa [Oceanospirillum sp. MED92] gi|89083349|gb|EAR62567.1| inner membrane protein, 60 kDa [Oceanospirillum sp. MED92] Length = 545 Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 140/487 (28%), Positives = 227/487 (46%), Gaps = 44/487 (9%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV 141 I+ KG L Y + S P V L NT Y ++ V P Sbjct: 88 IDTKGGDIIQAALPQYKAALGSELPFVLL--KQNTNRTYVSQSGLVGKNGPDASPEGRPT 145 Query: 142 WNLISGKIL---TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFS 197 + + + L T + L F + + + + + Y + V N S Q + Sbjct: 146 YAVTKNEYLLGDQDTLAVDLTFTDKQGVQITKRYTFTKGSYEINLEFIVNNQSEQQWAGN 205 Query: 198 PRGRIMRHKPQ--TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN--FHES--NSW 251 G+I R + T + G+Q V S E Y I+ + + F +S + + Sbjct: 206 LFGQIKRDRSDDPTQSTDMGMQSYLGGVF---STAEDPYEKIDFDDMDDGQFKKSSPDGY 262 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 + +S Y+ S +IP+ + Q + L + Y F + + + G+ + + G Sbjct: 263 VAMSQHYFLSAWIPAPGAEYSYQSRKL---NGNYIVGFLSPDFLVNAGEDKKVSATFYVG 319 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 K+ + +LA + +D+GW ++IA P++ML+ + Y LVGN+G+AI+ T+ V Sbjct: 320 PKDQEIM-----ELAQENLPLTVDYGWLWWIASPLYMLLKWIYGLVGNWGLAIIGITIVV 374 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 K F L K + S A M+ P++ L+E + Q + + M++LY+ INPL GC Sbjct: 375 KAALFHLNAKAFKSMAKMRKFGPEMTRLKELYGDDR-QKMSQEMMKLYQKEKINPLGGCL 433 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 PIL Q+P+F A+Y V+ S+++RHA F ++ DL+ DP I Sbjct: 434 PILAQMPIFIALYWVLMESVDLRHAEFL-YLADLSVKDPYFIL----------------- 475 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 PIIM +SMFIQ ++P P D QA I+ +P++F F FPAGL +YW +N++SI Sbjct: 476 --PIIMGVSMFIQQMLNPTPPDPMQAKIMKMLPIMFTFFFLWFPAGLTLYWVVNNILSIA 533 Query: 552 QQAVIMK 558 QQ VI K Sbjct: 534 QQYVINK 540 >gi|256548861|gb|ACU82912.1| 60 kD inner-membrane protein [Buchnera aphidicola (Acyrthosiphon kondoi)] Length = 537 Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 133/419 (31%), Positives = 216/419 (51%), Gaps = 41/419 (9%) Query: 154 TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKP 207 PIK V + N + + +T L + Y +I + N S + ++ + G+I + K Sbjct: 146 VPIKWV--SQNGVTYTKTFILKPNSYDIQIEYDIYNPSKEILKMNMFGQIKQTVNLPKKR 203 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH--ESNSWLGISDKYWASVFIP 265 + F +Q A +KY S N H N W+ + +Y+A +IP Sbjct: 204 NIYSGNFALQTFRGAAYSSSDNKYEKYKFDMISDNKNLHVITENGWIAMLQQYFAVAWIP 263 Query: 266 SKETSFHSQFKYLSD-GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 + Y S+ H + ++ I +LP + L+ G P I E + Sbjct: 264 Q---NLGQNIIYTSNLDHGIVAIGYKSSLINVLPHSRSIIKSKLWIG----PEIQK-EMN 315 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 L P ++ +D+GW +F+++P+F L++ +N+VGN+G +I+L T +K + +PL K QYV Sbjct: 316 LVAPNLDLTVDYGWLWFLSQPLFKLLTILHNVVGNWGFSIILITFIMKAVTYPLTKAQYV 375 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S M+ +QPKI E++EKF ++ Q+ MI LYK INPL G PI +Q+P+F ++Y Sbjct: 376 SMLKMRALQPKIKEIKEKFSNDKQRISQE-MIVLYKKEKINPLTGFLPIFIQMPIFLSLY 434 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 ++ S+E+RHAPF WI DL++ D P+Y + PIIM L+MF Sbjct: 435 YMLIGSVELRHAPFLLWIHDLSSQD-----------PYY--------VLPIIMGLTMFFI 475 Query: 505 MKMSPPP--ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 K S +D Q I+N+MPV+F FP+GL++Y+ SN+++I+QQ I+ G Sbjct: 476 QKTSSANHVSDPFQKKIMNFMPVIFTAFFLWFPSGLVLYYIISNLVTIIQQKFILSNLG 534 >gi|261856984|ref|YP_003264267.1| membrane protein insertase, YidC/Oxa1 family domain containing [Halothiobacillus neapolitanus c2] gi|261837453|gb|ACX97220.1| membrane protein insertase, YidC/Oxa1 family domain containing [Halothiobacillus neapolitanus c2] Length = 570 Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 159/545 (29%), Positives = 258/545 (47%), Gaps = 46/545 (8%) Query: 38 KNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRG 96 K+I P+ +AV A+ S + + + +K L I+L+G D+ +L Sbjct: 54 KDIPATSAPSASGQDQSAVPGGSAAKPTSKAAQTITVKTDVLALKISLQGGVIDEADLLK 113 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP- 155 Y + P V LL+ SN Y A+ + P + + ++ TP Sbjct: 114 YPQEQDKADP-VRLLTDSN-GFVYVAQSGLIGEKGA---PAPDHYAQYTAPQMEYTLTPG 168 Query: 156 -----IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQ 208 I L ++ + + I Y ++ + N S S ++ R P Sbjct: 169 ENELRIPLTWEKDGIKITKLIIIKRGDYTVQVEYKIDNTSQSPWAASQYRQLTRLGTTPG 228 Query: 209 TA---TNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 T T T V G + D+ E+ + ++ K+ +S S+ W+ I Y+ S ++ Sbjct: 229 TQLVHTYTGTVYAGDVPGTKDRLAYEKIPFEEMLKTKLSK-DLSSGWVAIIQHYFMSAWV 287 Query: 265 PSKETSFHSQFKYLSDGHAR--YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 PS + + +SD + + Y S+ TI G S ++ L+ G P I Sbjct: 288 PSDRQQVNHFYTLVSDKNNQTLYTIGMSSPVTTIPAGGSGELSSTLYVG----PKIQANL 343 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 LA + ID+G F IA P+F L+ +F+ VGN+G +I+L T+ +KL F + Sbjct: 344 APLA-QGLNLTIDFGIFTVIADPIFWLLKHFHEWVGNWGWSIVLVTLVIKLFFLWPSAIS 402 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y S A M+ + PK+ L+EKF + Q L + M++LY+ INPL GC PI++QIPVF + Sbjct: 403 YRSMAKMRAVTPKMKALKEKFGEDR-QKLSQEMMKLYQREKINPLGGCLPIVIQIPVFIS 461 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y V++ S+E+R AP+ WI DL+ DP + P++M +SMF Sbjct: 462 LYWVLAESVELRQAPWILWIHDLSQKDPYFVL-------------------PLLMGISMF 502 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 IQ K++P P D Q I W+PV+F S FPAGL++YW +N++SI QQ +I + Sbjct: 503 IQQKLNPAPVDPMQQKIFAWLPVIFTIFFSFFPAGLVLYWFVNNLLSIAQQYMITRKIEK 562 Query: 563 EIGLI 567 ++ LI Sbjct: 563 QMALI 567 >gi|332308616|ref|YP_004436467.1| membrane protein insertase, YidC/Oxa1 family domain containing [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175945|gb|AEE25199.1| membrane protein insertase, YidC/Oxa1 family domain containing [Glaciecola agarilytica 4H-3-7+YE-5] Length = 543 Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 137/483 (28%), Positives = 238/483 (49%), Gaps = 41/483 (8%) Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE---LPN 137 SIN G NL Y L+ S +LL PS + A+ V T N I+ P Sbjct: 83 SINTVGGDVISANLLKYPLEQGSEG-TYSLLRPSG-PTIFVAQSGLVGT-NGIDKTARPT 139 Query: 138 SNTVWN--LISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIR 195 + + ++ G LT P+ K+ + E + + H + K+ V N S D Sbjct: 140 YSVAQDSYIMQGDTLT--VPLTYTAKSGLIVTKEFIFNKNSHDV-KVNYHVENTSSDVKS 196 Query: 196 FSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGI 254 G++ + + F G D+ + + D++ ++ N W + Sbjct: 197 VKQFGQLKQSTADQGGSMFMPTYRGGAFSTEDERYEKYSFDDMQDKNL-NQTTPAGWAAM 255 Query: 255 SDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE 314 + Y+ S ++P ++ + K +G+A + I PG+S+ + L+ G K+ Sbjct: 256 IEHYFVSAWVPPQDQTNSLYSKMTQNGNAI--IGVVGQSVDIEPGQSVDIQSSLYLGPKD 313 Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374 T+ + L ++ +D+G+ ++I++P+F + + ++LVGN+G +I+L T+ VK Sbjct: 314 QDTLKQIARGL-----DLTVDYGFLWWISQPLFTFLQFIHSLVGNWGFSIILITIVVKGA 368 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 +PL K QY S A M+ ++PK+D L+E++ Q +Q+AM+++YK +NP+ GC+P+L Sbjct: 369 MYPLTKAQYESMAKMRALKPKMDALKERYGDDK-QKMQQAMMEMYKKDKVNPMGGCFPLL 427 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 LQ+P+F A+Y V+ S+E+RHA F WI DL+ DP + P Sbjct: 428 LQMPIFLALYWVLLESVELRHADFIFWITDLSVKDPYFVL-------------------P 468 Query: 495 IIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 I+ LSM++ K+ P D Q I+ +MPV FPAGL++YW SN+I+++Q Sbjct: 469 ILTGLSMYLLQKLQPMTMTDPMQQKIMQFMPVAMSLFFFIFPAGLVLYWLISNIITLIQA 528 Query: 554 AVI 556 +I Sbjct: 529 KII 531 >gi|222823561|ref|YP_002575135.1| 60 kDa inner-membrane protein [Campylobacter lari RM2100] gi|222538783|gb|ACM63884.1| 60 kDa inner-membrane protein [Campylobacter lari RM2100] Length = 526 Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 157/576 (27%), Positives = 274/576 (47%), Gaps = 83/576 (14%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N + I ++V++ + + Y Y I + +NI ++Q N S Sbjct: 1 MSENLSQQKRILIAVVLSFLFFVVYDYFFIPKAPQTEQNITQIEQNNSAPQSTINANTQA 60 Query: 61 RAQALSMSPRVEL------------KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 LS++ + E+ + I L ++ D N + +L +S SP+ Sbjct: 61 PKTELSVNQKEEIAVVKSEHFEAHIDSLGRIAKFYLSDEKYKDENGKSINLVDTSLSPLP 120 Query: 109 TLLSPSNTK-NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 + S+TK N Y ++ I + + NT ILT +N NN++ Sbjct: 121 LEIRFSDTKINQEAFNTPYTTSQKTINVSDENTTL------ILT---------QNLNNLV 165 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 + I+ ++ + D N S D F G ++P A +++ V G + + D Sbjct: 166 VTKKITFHKYGNY---DLEVNLSKDAAYFITPG----YRPNIAVDSYTVH-GVLILDKDD 217 Query: 228 SLVEQKYSDIE-KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL--SDGHAR 284 + + D+E S SN + + SD+Y+++ F +F + D H Sbjct: 218 KITMLEDGDVENDESFSNV----TLMAASDRYYSAFFY-----NFEKPLSAVVTKDNHEN 268 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 SA+ G + G+KE + + + PR + ++++GWF FIAK Sbjct: 269 SIVFASASNTFKASG---------YIGSKEHDILRNID-----PRLDNVVEYGWFTFIAK 314 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PM+ + + + +GN+G AI++ T+ V+++ FPL K +S +K++ PK+ E+RE++K Sbjct: 315 PMYEFLDFLHGYLGNWGWAIVIMTLIVRIILFPLTYKSMISMNKLKDLAPKMKEIRERYK 374 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 PQ + M++LYK H NP++GC PIL+QIP+FFAIY+V+ ++E++ AP+ WI D Sbjct: 375 -GDPQKMNLHMMELYKKHGANPMSGCLPILIQIPIFFAIYRVLLNAIELKAAPWAFWITD 433 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+ DP I PI M L+MFIQ ++P D Q I+ ++ Sbjct: 434 LSVMDPWFIL-------------------PIFMGLTMFIQQLITPMAIQDPMQEKIMKFL 474 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 P++F F +FPAGL +YW +N+ S++QQ ++ K+ Sbjct: 475 PLIFTFFFLTFPAGLTLYWCVNNICSLIQQVIVNKL 510 >gi|221069751|ref|ZP_03545856.1| YidC translocase/secretase [Comamonas testosteroni KF-1] gi|220714774|gb|EED70142.1| YidC translocase/secretase [Comamonas testosteroni KF-1] Length = 570 Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 140/494 (28%), Positives = 240/494 (48%), Gaps = 59/494 (11%) Query: 100 DVSSNSPIVTLLSPSNTKNAYFAEL-DYVSTANNIEL-----PNSNTVW----NLISGKI 149 DV+ S ++ L S +EL Y TA++ +L N+ V+ LI G Sbjct: 87 DVTVGSDVMRLTFDSEGGTLKHSELLKYSDTADDKKLMQVFEENAKRVYLGQTGLIGGNF 146 Query: 150 LTPTTPIKLV-----FKNANNILFERTISLDE--------------HYLFKIVDTVTNNS 190 T TP+ ++ K+ + + R S D+ Y + V N Sbjct: 147 PTHKTPMTVMPGERELKDGQDSVQVRFESADQGGVKLVKTFTLKRGSYAVDVQHDVVNTG 206 Query: 191 IDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES 248 + +++R +KP+ ++ + G K + ++ DIE S Sbjct: 207 SAAVNPQLYMQLVRDGNKPEHESSFYSTFTGPAVYTDAKKYHKVEFKDIESGKAEVDKAS 266 Query: 249 -NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 N ++ + Y+AS ++ + + + + D Y T+ PG++ T ++ Sbjct: 267 PNGFVAMVQHYFASAWLLADGIQRDNFVRKVGDN--LYAVGMITPVGTVEPGQTKTVSSR 324 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 LF+G + P + P E++ D+GW +AKP++ L+S + +GN+G +I+ Sbjct: 325 LFSGPQIEPMLEKLS-----PGLELVKDYGWLTILAKPLYWLLSELHKFIGNWGWSIVAL 379 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 V +K+ F+ L K Y S A MK I P+I E+RE+ K P Q +Q+ M+++Y+ +NP+ Sbjct: 380 VVLLKIAFYWLNAKAYSSMAKMKAINPRIQEMRERLKDKPQQ-MQQEMMRIYREEKVNPM 438 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC PI++QIPVF A+Y V+ S+E+R+AP+ GWI DL+ D PF+ Sbjct: 439 GGCLPIIIQIPVFMALYWVLQSSVEIRNAPWIGWIHDLSVPD-----------PFF---- 483 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 I P++M+LS +Q ++P P D QA ++ MP++F FP+GL++YW +N+ Sbjct: 484 ----ILPLLMTLSSLLQTALNPAPPDPMQAKMMWIMPLMFSVMFFFFPSGLVLYWLTNNI 539 Query: 548 ISIVQQAVIMKMHG 561 +SI QQ +I K G Sbjct: 540 LSIAQQWIINKRMG 553 >gi|241767065|ref|ZP_04764844.1| YidC translocase/secretase [Acidovorax delafieldii 2AN] gi|241362388|gb|EER58355.1| YidC translocase/secretase [Acidovorax delafieldii 2AN] Length = 495 Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 116/338 (34%), Positives = 185/338 (54%), Gaps = 55/338 (16%) Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR--YQA 287 +E+ ++IEKS+ +N ++ + Y+AS ++ L DG R + Sbjct: 186 IEEGKAEIEKSA------TNGYVAMVQHYFASAWL-------------LGDGVQRELFMR 226 Query: 288 K-----FSANEIT----ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 K +S IT I PG S T LFAG + T+ + P E++ D+GW Sbjct: 227 KVDTNLYSVGMITPVGEIAPGASKTVQAQLFAGPQVEKTL-----EALTPGLELVKDYGW 281 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +AKP++ L+ + L+GN+G +I+ + +K+ F+ L K Y S A MK I PKI E Sbjct: 282 LTILAKPLYWLLDQLHKLLGNWGWSIVGLVLLLKIAFYWLNAKAYASMAKMKAINPKITE 341 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +RE+ K P Q +Q+ M+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+EMR+AP+ Sbjct: 342 MRERLKDKPQQ-MQQEMMRIYREEKVNPMGGCFPIMIQIPVFIALYWVLLSSVEMRNAPW 400 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 GWI DL+ DP I P++M+ S +Q ++P P D QA Sbjct: 401 IGWIHDLSTPDPYFIL-------------------PLLMTASSLLQTALNPAPPDPMQAK 441 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ +MP++F FPAGL++YW +N++SI QQ +I Sbjct: 442 MMWFMPLIFSVMFFFFPAGLVMYWLTNNILSIAQQWII 479 >gi|240122686|ref|ZP_04735642.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae PID332] gi|240127387|ref|ZP_04740048.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae SK-93-1035] gi|260441339|ref|ZP_05795155.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae DGI2] gi|268681283|ref|ZP_06148145.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID332] gi|268685760|ref|ZP_06152622.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae SK-93-1035] gi|291044698|ref|ZP_06570407.1| inner membrane protein oxaA [Neisseria gonorrhoeae DGI2] gi|268621567|gb|EEZ53967.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID332] gi|268626044|gb|EEZ58444.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae SK-93-1035] gi|291011592|gb|EFE03588.1| inner membrane protein oxaA [Neisseria gonorrhoeae DGI2] Length = 545 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 126/417 (30%), Positives = 202/417 (48%), Gaps = 41/417 (9%) Query: 153 TTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 T ++L N + ++ + + YL + + N S S RI+R + Sbjct: 136 TVEVRLSAPETNGLKIDKVYTFTKDSYLVNVRFDIANGSAQTANLSADYRIVRDHSEPEG 195 Query: 212 NTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SWLGISDKYWASV 262 + G + + + + +SD++ + S E+ WLG+ + ++ S Sbjct: 196 QGYFTHSYVGPVVYTPEGNFQKVSFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMST 255 Query: 263 FI--PSKETSFHSQFKYLSDGHAR----YQAKFSANEITILPGKSITTTNFLFAGAKEFP 316 +I P S + D R Y A S I G T L+AG + Sbjct: 256 WILQPKGGQSVCAAGDCRIDIKRRSDKLYSASVSVPLAAIQAGAKAETAVNLYAGPQTTS 315 Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 I + +L + + D+G ++ A P+F L++ +N++GN+G AI++ T+ VK + + Sbjct: 316 VIANIADNLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLY 370 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 PL Y S A M+ PK+ ++EK+ Q+AM+QLYK INPL GC P+LLQ Sbjct: 371 PLTNASYRSMAKMRAAAPKLQTIKEKYGDDR-MAQQQAMMQLYKDEKINPLGGCLPMLLQ 429 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 IPVF +Y + S+E+R AP+ GWI DL+ AD P+Y I PII Sbjct: 430 IPVFIGLYWALFASVELRQAPWLGWITDLSRAD-----------PYY--------ILPII 470 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M+ +MF Q ++PPP D QA ++ MP+VF FPAGL++YW +N+++I QQ Sbjct: 471 MAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527 >gi|239998129|ref|ZP_04718053.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae 35/02] gi|268593980|ref|ZP_06128147.1| inner membrane protein oxaA [Neisseria gonorrhoeae 35/02] gi|268547369|gb|EEZ42787.1| inner membrane protein oxaA [Neisseria gonorrhoeae 35/02] Length = 545 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 128/419 (30%), Positives = 203/419 (48%), Gaps = 45/419 (10%) Query: 153 TTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 T ++L N + ++ + + YL + + N S S RI+R + Sbjct: 136 TVEVRLSAPETNGLKIDKVYTFTKDSYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEG 195 Query: 212 NTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SWLGISDKYWASV 262 + G + + + + +SD++ + S E+ WLG+ + ++ S Sbjct: 196 QGYFTHSYAGPVVYTPEGNFQKVSFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMST 255 Query: 263 FI--PSKETSF------HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE 314 +I P S H K SD Y A S I G T L+AG + Sbjct: 256 WILQPKGGQSVCAAGDCHIDIKRRSD--KLYSASVSVPLAAIQAGAKAETAVNLYAGPQT 313 Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374 I + +L + + D+G ++ A P+F L++ +N++GN+G AI++ T+ VK + Sbjct: 314 TSVIANIADNLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAIVVLTIIVKAV 368 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 +PL Y S A M+ PK+ ++EK+ Q+AM+QLYK INPL GC P+L Sbjct: 369 LYPLTNASYRSMAKMRAAAPKLQTIKEKYGDDR-MAQQQAMMQLYKDEKINPLGGCLPML 427 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 LQIPVF +Y + S+E+R AP+ GWI DL+ AD P+Y I P Sbjct: 428 LQIPVFIGLYWALFASVELRQAPWLGWITDLSRAD-----------PYY--------ILP 468 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 IIM+ +MF Q ++PPP D QA ++ MP+VF FPAGL++YW +N+++I QQ Sbjct: 469 IIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527 >gi|299530924|ref|ZP_07044338.1| inner membrane insertion protein [Comamonas testosteroni S44] gi|298721145|gb|EFI62088.1| inner membrane insertion protein [Comamonas testosteroni S44] Length = 570 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 114/339 (33%), Positives = 183/339 (53%), Gaps = 37/339 (10%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR--------- 284 Y+D +K F + S DK + F+ + F S + L+DG R Sbjct: 241 YTDAKKYHKVEFKDIESGKAEVDKASPNGFVAMVQHYFASAW-LLADGIQRDNFVRKVGD 299 Query: 285 --YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y T+ PG++ T ++ LF+G + P + P E++ D+GW + Sbjct: 300 NLYAVGMITPVGTVEPGQTKTVSSRLFSGPQIEPMLEKLS-----PGLELVKDYGWLTIL 354 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP++ L+S + +GN+G +I+ V +K+ F+ L K Y S A MK I P+I E+RE+ Sbjct: 355 AKPLYWLLSELHKFIGNWGWSIVALVVLLKIAFYWLNAKAYSSMAKMKAINPRIQEMRER 414 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 K PQ +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+E+R+AP+ GWI Sbjct: 415 LKDK-PQQMQQEMMRIYREEKVNPMGGCLPIVIQIPVFMALYWVLQSSVEIRNAPWIGWI 473 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ D PF+ I P++M+LS +Q ++P P D QA ++ Sbjct: 474 HDLSVPD-----------PFF--------ILPLLMTLSSLLQTALNPAPPDPMQAKMMWI 514 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 MP++F FP+GL++YW +N++SI QQ +I K G Sbjct: 515 MPLMFSVMFFFFPSGLVLYWLTNNILSIAQQWIINKRMG 553 >gi|194100143|ref|YP_002003283.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae NCCP11945] gi|240013310|ref|ZP_04720223.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae DGI18] gi|240117048|ref|ZP_04731110.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae PID1] gi|240120382|ref|ZP_04733344.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae PID24-1] gi|268602734|ref|ZP_06136901.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID1] gi|254773007|sp|B4RJJ2|OXAA_NEIG2 RecName: Full=Inner membrane protein oxaA gi|193935433|gb|ACF31257.1| Inner membrane protein oxaA [Neisseria gonorrhoeae NCCP11945] gi|268586865|gb|EEZ51541.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID1] Length = 545 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 128/419 (30%), Positives = 203/419 (48%), Gaps = 45/419 (10%) Query: 153 TTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 T ++L N + ++ + + YL + + N S S RI+R + Sbjct: 136 TVEVRLSAPETNGLKIDKVYTFTKDSYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEG 195 Query: 212 NTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SWLGISDKYWASV 262 + G + + + + +SD++ + S E+ WLG+ + ++ S Sbjct: 196 QGYFTHSYVGPVVYTPEGNFQKVSFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMST 255 Query: 263 FI--PSKETSF------HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE 314 +I P S H K SD Y A S I G T L+AG + Sbjct: 256 WILQPKGGQSVCAAGDCHIDIKRRSD--KLYSASVSVPLAAIQAGAKAETAVNLYAGPQT 313 Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374 I + +L + + D+G ++ A P+F L++ +N++GN+G AI++ T+ VK + Sbjct: 314 TSVIANIADNLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAIVVLTIIVKAV 368 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 +PL Y S A M+ PK+ ++EK+ Q+AM+QLYK INPL GC P+L Sbjct: 369 LYPLTNASYRSMAKMRAAAPKLQTIKEKYGDDR-MAQQQAMMQLYKDEKINPLGGCLPML 427 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 LQIPVF +Y + S+E+R AP+ GWI DL+ AD P+Y I P Sbjct: 428 LQIPVFIGLYWALFASVELRQAPWLGWITDLSRAD-----------PYY--------ILP 468 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 IIM+ +MF Q ++PPP D QA ++ MP+VF FPAGL++YW +N+++I QQ Sbjct: 469 IIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527 >gi|291277160|ref|YP_003516932.1| inner membrane protein OxaA [Helicobacter mustelae 12198] gi|290964354|emb|CBG40204.1| putative inner-membrane protein, OxaA [Helicobacter mustelae 12198] Length = 546 Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 100/252 (39%), Positives = 153/252 (60%), Gaps = 26/252 (10%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 F G K++ + + P ++++G F AKP+F+L+ Y + +GN+G AI+ T Sbjct: 303 FIGPKDYQELKSVD-----PALRNVVEYGLITFFAKPVFLLLEYLHQYIGNWGWAIITLT 357 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 V VKL+ +PL+ K VS +K++ PK+ E++EK+K PQ LQ M+QLYK H NP+ Sbjct: 358 VIVKLVLYPLSYKGMVSMQKLKDLTPKMKEIQEKYK-GDPQKLQMHMMQLYKKHGANPMG 416 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+L+QIP+F+AIY+V+ S+E++ APF WI+DL+ DP Y Sbjct: 417 GCLPLLIQIPIFYAIYRVLYNSVELKSAPFILWIQDLSVMDP------------YF---- 460 Query: 489 HVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + PI+M +SM++Q ++P D QA + +PVVF L FPAGL++YW+ +N+ Sbjct: 461 ---VLPILMGVSMYVQQALTPNTFTDPIQAKVFKMLPVVFTIFLIFFPAGLVLYWTINNI 517 Query: 548 ISIVQQAVIMKM 559 +SI QQ I KM Sbjct: 518 LSIFQQLSINKM 529 >gi|160901487|ref|YP_001567069.1| 60 kDa inner membrane insertion protein [Delftia acidovorans SPH-1] gi|160367071|gb|ABX38684.1| 60 kDa inner membrane insertion protein [Delftia acidovorans SPH-1] Length = 570 Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 184/332 (55%), Gaps = 33/332 (9%) Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +E + +EKSS S ++ + Y+AS ++ ++ + + + + Y Sbjct: 255 IESGKASVEKSS------SGGYVAMVQHYFASAWLLAEGIQRDNFLRKVDNN--LYAVGM 306 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 TI PG+S + LFAG P I + LA P E++ D+GW +AKP++ L Sbjct: 307 ITPVGTIEPGQSKSVEARLFAG----PQIEKRLESLA-PGLELVKDYGWLTILAKPLYWL 361 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + +GN+G +I+ + +K+ F+ L K Y S A MK I P+I E+RE+ K P Q Sbjct: 362 LDKLHGFLGNWGWSIVALVLLLKIAFYWLNAKAYSSMAKMKAINPRIMEMRERLKDKPQQ 421 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+E+R+AP+ GWI DL+A D Sbjct: 422 -MQQEMMRIYREEKVNPMGGCLPIIIQIPVFIALYWVLLSSVEIRNAPWIGWITDLSAKD 480 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P LF I P++M+LS +Q ++P P D QA ++ MP+VF Sbjct: 481 P-----LF--------------ILPVLMTLSSLLQTALNPAPPDPMQAKMMWIMPLVFSV 521 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++YW +N++SI QQ +I G Sbjct: 522 MFFFFPAGLVLYWLTNNILSIAQQWIINTRMG 553 >gi|240079892|ref|ZP_04724435.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae FA19] gi|268596034|ref|ZP_06130201.1| inner membrane protein oxaA [Neisseria gonorrhoeae FA19] gi|268549822|gb|EEZ44841.1| inner membrane protein oxaA [Neisseria gonorrhoeae FA19] Length = 545 Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 126/417 (30%), Positives = 202/417 (48%), Gaps = 41/417 (9%) Query: 153 TTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 T ++L N + ++ + + YL + + N S S RI+R + Sbjct: 136 TVEVRLSAPETNGLKIDKVYTFTKDSYLVNVRFDIANGSAQTANLSADYRIVRDHSEPEG 195 Query: 212 NTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SWLGISDKYWASV 262 + G + + + + +SD++ + S E+ WLG+ + ++ S Sbjct: 196 QGYFTHSYVGPVVYTPEGNFQKVSFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMST 255 Query: 263 FI--PSKETSFHSQFKYLSDGHAR----YQAKFSANEITILPGKSITTTNFLFAGAKEFP 316 +I P S + D R Y A S I G T L+AG + Sbjct: 256 WILQPKGGQSVCAAGDCRIDIKRRSDKLYSASVSVPLAAIQAGAKAETAVNLYAGPQTTS 315 Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 I + +L + + D+G ++ A P+F L++ +N++GN+G AI++ T+ VK + + Sbjct: 316 VIANIADNLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLY 370 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 PL Y S A M+ PK+ ++EK+ Q+AM+QLYK INPL GC P+LLQ Sbjct: 371 PLTNASYRSMAKMRAAAPKLQTIKEKYGDDR-MAQQQAMMQLYKDEKINPLGGCLPMLLQ 429 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 IPVF +Y + S+E+R AP+ GWI DL+ AD P+Y I PII Sbjct: 430 IPVFIGLYWALFASVELRQAPWLGWITDLSRAD-----------PYY--------ILPII 470 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M+ +MF Q ++PPP D QA ++ MP+VF FPAGL++YW +N+++I QQ Sbjct: 471 MAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFFPAGLVLYWVVNNLLTISQQ 527 >gi|224827183|ref|ZP_03700278.1| 60 kDa inner membrane insertion protein [Lutiella nitroferrum 2002] gi|224600576|gb|EEG06764.1| 60 kDa inner membrane insertion protein [Lutiella nitroferrum 2002] Length = 550 Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 155/564 (27%), Positives = 257/564 (45%), Gaps = 51/564 (9%) Query: 11 IALSVIIVYAWQNFYV-YPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSP 69 I LS+ I+ WQ ++ P +++ QT + +A A L+ Sbjct: 10 IVLSMSILLLWQEYFAPKPTPQQLAKS----QTTAGAPGAPAAPSAAAQPADAAKLTSGQ 65 Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 R+ + I+ G L+L ++ ++ P L Y A+ V+ Sbjct: 66 RITVSTDLYKAEIDTVGGDLRRLDLLKHNAAEDASKPFE--LFTDKGGRVYVAQTGLVA- 122 Query: 130 ANNIELPNSNTVWNL--ISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTV 186 A+N LP TV+ S ++ +KL AN + + + + Y + + Sbjct: 123 ASNPALPTHKTVFTAEKTSYQMNGDKLEVKLTAPEANGVKVSKVYTFKKGAYDIDVRYDI 182 Query: 187 TNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 +N+ + + R++R KP+ G D + + D+ K Sbjct: 183 SNSGSAPVAPTAYFRLLRDGQKPEGEGRFASTFTGPAVYTTDGKFQKVSFDDLTKGKGDY 242 Query: 245 FHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK-----FSANEI---- 294 + N W+ + Y+ S +I Q + R++ K FSA + Sbjct: 243 VKSADNGWVSMLQHYFMSAWIIK---PLGGQSVCAAGQPCRFELKSSNGLFSAATLVDLP 299 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I PG S + T L+AG +EF I + E D+GW + A P+F L++ + Sbjct: 300 AIAPGASRSITVPLYAGPEEFDIITKVADGM-----EYAKDYGWVHIFASPLFWLLTKLH 354 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 LV N+G AI+L T+ VK LF+PL Y S MK + P+++ L+E++ + +Q+A Sbjct: 355 ALVNNWGWAIILLTLTVKALFYPLTAASYRSMGKMKALAPRLERLKEQYGDDRMK-MQQA 413 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 ++++YK+ +NPL GC P+++QIPVF +Y + S+E+R AP+ WI DLA D Sbjct: 414 VMEMYKSEKVNPLGGCLPMVIQIPVFIGLYWSLLASVELRQAPWTLWINDLARPD----- 468 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 PFY + P IM+++MF+Q ++PPPAD QA ++ MP+ F F Sbjct: 469 ------PFY--------VLPAIMAITMFLQTFLNPPPADPMQAKMMKIMPLAFSAMFFFF 514 Query: 535 PAGLIIYWSWSNVISIVQQAVIMK 558 PAGL++YW +NV+SI QQ I K Sbjct: 515 PAGLVLYWVVNNVLSIAQQWYINK 538 >gi|120613420|ref|YP_973098.1| protein translocase subunit yidC [Acidovorax citrulli AAC00-1] gi|120591884|gb|ABM35324.1| protein translocase subunit yidC [Acidovorax citrulli AAC00-1] Length = 565 Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 115/338 (34%), Positives = 189/338 (55%), Gaps = 45/338 (13%) Query: 230 VEQKYSDIEKSSISNF------HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 +E ++I+KSS + + + + +WL ++D +F+ +T+ +S S G Sbjct: 256 IESGKAEIDKSSTNGYVAMVQHYFATAWL-LADGIQRDLFVRKVDTNLYSVGMITSVGE- 313 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 I PG+S T LFAG P I + L+ P E++ D+GW +A Sbjct: 314 ------------IAPGQSKTLDARLFAG----PQIETMLEKLS-PGLELVKDYGWLTILA 356 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP++ L+ + ++ N+G +I+ + +K+ F+ L K Y S A MK I PKI E+RE+ Sbjct: 357 KPLYWLLEQLHKILNNWGWSIVGLVLLLKIAFYWLNAKAYASMAKMKAINPKIMEMRERL 416 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K P Q +Q+ M+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+EMR+AP+ GWI Sbjct: 417 KDKP-QQMQQEMMRIYREEKVNPMGGCFPIMIQIPVFIALYWVLLSSVEMRNAPWIGWIH 475 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL++ D PF+ I P++M+ S +Q ++P P D QA ++ +M Sbjct: 476 DLSSPD-----------PFF--------ILPLLMTASSLLQTALNPAPPDPMQAKMMWFM 516 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P++F FPAGL++YW +N++SI QQ +I K G Sbjct: 517 PLIFSVMFFFFPAGLVLYWLTNNILSIAQQWIINKRMG 554 >gi|59802471|ref|YP_209183.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae FA 1090] gi|240015755|ref|ZP_04722295.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae FA6140] gi|240112100|ref|ZP_04726590.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae MS11] gi|240114846|ref|ZP_04728908.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae PID18] gi|240124874|ref|ZP_04737760.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae SK-92-679] gi|254492908|ref|ZP_05106079.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae 1291] gi|268598157|ref|ZP_06132324.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae MS11] gi|268600501|ref|ZP_06134668.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID18] gi|268683454|ref|ZP_06150316.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae SK-92-679] gi|293397800|ref|ZP_06642006.1| inner membrane protein oxaA [Neisseria gonorrhoeae F62] gi|75507262|sp|Q5F4W6|OXAA_NEIG1 RecName: Full=Inner membrane protein oxaA gi|59719366|gb|AAW90771.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|226511948|gb|EEH61293.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae 1291] gi|268582288|gb|EEZ46964.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae MS11] gi|268584632|gb|EEZ49308.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID18] gi|268623738|gb|EEZ56138.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae SK-92-679] gi|291611746|gb|EFF40815.1| inner membrane protein oxaA [Neisseria gonorrhoeae F62] Length = 545 Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 126/417 (30%), Positives = 202/417 (48%), Gaps = 41/417 (9%) Query: 153 TTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 T ++L N + ++ + + YL + + N S S RI+R + Sbjct: 136 TVEVRLSAPETNGLKIDKVYTFTKDSYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEG 195 Query: 212 NTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SWLGISDKYWASV 262 + G + + + + +SD++ + S E+ WLG+ + ++ S Sbjct: 196 QGYFTHSYVGPVVYTPEGNFQKVSFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMST 255 Query: 263 FI--PSKETSFHSQFKYLSDGHAR----YQAKFSANEITILPGKSITTTNFLFAGAKEFP 316 +I P S + D R Y A S I G T L+AG + Sbjct: 256 WILQPKGGQSVCAAGDCRIDIKRRSDKLYSASVSVPLAAIQAGAKAETAVNLYAGPQTTS 315 Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 I + +L + + D+G ++ A P+F L++ +N++GN+G AI++ T+ VK + + Sbjct: 316 VIANIADNLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLY 370 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 PL Y S A M+ PK+ ++EK+ Q+AM+QLYK INPL GC P+LLQ Sbjct: 371 PLTNASYRSMAKMRAAAPKLQTIKEKYGDDR-MAQQQAMMQLYKDEKINPLGGCLPMLLQ 429 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 IPVF +Y + S+E+R AP+ GWI DL+ AD P+Y I PII Sbjct: 430 IPVFIGLYWALFASVELRQAPWLGWITDLSRAD-----------PYY--------ILPII 470 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M+ +MF Q ++PPP D QA ++ MP+VF FPAGL++YW +N+++I QQ Sbjct: 471 MAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527 >gi|109900610|ref|YP_663865.1| 60 kDa inner membrane insertion protein [Pseudoalteromonas atlantica T6c] gi|123360110|sp|Q15MS7|OXAA_PSEA6 RecName: Full=Inner membrane protein oxaA gi|109702891|gb|ABG42811.1| protein translocase subunit yidC [Pseudoalteromonas atlantica T6c] Length = 543 Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 137/484 (28%), Positives = 239/484 (49%), Gaps = 43/484 (8%) Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 SIN G NL Y L+ S +LL PS + A+ V T N I+ S Sbjct: 83 SINTVGGDVISANLLKYPLEQGSQG-TYSLLRPSG-PTIFVAQSGLVGT-NGID-KGSRP 138 Query: 141 VWNL------ISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQI 194 +++ + G LT P+ K+ + E S + H + K+ V N S D Sbjct: 139 TYSVSQDSFVMEGDSLT--VPLTYTAKSGLLVTKEFIFSKNSHEV-KVNYHVENTSSDVK 195 Query: 195 RFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 G++ + + F G D+ + + D++ +++ + W Sbjct: 196 SVKQFGQLKQSTADQGGSMFMPTYRGGAFSTEDERYEKYSFDDMQDKNLNQVTPAG-WTA 254 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 + + Y+ S ++P ++ + K +G+A F + I PG+S+ + L+ G K Sbjct: 255 MIEHYFVSAWVPPQDQTNSLYSKMTQNGNAI--IGFIGQSVDIEPGQSVDIQSSLYLGPK 312 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + T+ + L ++ +D+G+ ++I+K +F + + ++L+GN+G +I+L T+ VK Sbjct: 313 DQDTLEKIARGL-----DLTVDYGFLWWISKYLFAFLQFIHSLIGNWGFSIILITIVVKG 367 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 +PL K QY S A M+ ++PK+D L+E++ Q +Q+AM+++YK +NP+ GC+P+ Sbjct: 368 AMYPLTKAQYESMAKMRALKPKMDALKERYGDDK-QKMQQAMMEMYKKDKVNPMGGCFPL 426 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 LLQ+P+F A+Y V+ S+E+RHA F WI DL+ DP + Sbjct: 427 LLQMPIFLALYWVLLESVELRHANFIFWITDLSVKDPYFVL------------------- 467 Query: 494 PIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 PI+ LSM++ K+ P D Q I+ +MPV FPAGL++YW SN+I+++Q Sbjct: 468 PILTGLSMYLLQKLQPMTMTDPMQQKIMQFMPVAMSLFFFIFPAGLVLYWLISNIITLIQ 527 Query: 553 QAVI 556 +I Sbjct: 528 AKII 531 >gi|237809901|ref|YP_002894341.1| 60 kDa inner membrane insertion protein [Tolumonas auensis DSM 9187] gi|259515732|sp|C4LDZ4|OXAA_TOLAT RecName: Full=Inner membrane protein oxaA gi|237502162|gb|ACQ94755.1| 60 kDa inner membrane insertion protein [Tolumonas auensis DSM 9187] Length = 549 Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 131/444 (29%), Positives = 222/444 (50%), Gaps = 46/444 (10%) Query: 131 NNIELP---NSNTVWNLISGK--ILTPTTPIKLVFKNA-NNILFERTISLDEHYLFKIVD 184 N E P + T + L+ GK ++ P T F +A N+ +R + E Y + Sbjct: 124 NQAERPVYTANGTEFALVEGKDELVVPMT-----FTDAKGNVFTKRFVLKRESYAVGVDY 178 Query: 185 TVTNNSID--QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 V N S +I+F + + P+ ++ + F S EQ+Y + S I Sbjct: 179 QVKNVSAQPLEIQFYGQLKQTIAAPEGSSTPGMMASAFHGAA--YSSAEQRYEKVNFSDI 236 Query: 243 S----NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT--I 296 + W G+ Y+ + + + H K +S K S I Sbjct: 237 GETKLDVATQAGWAGMLQHYFVTAWTGKADAQNHIYGKAVS---VNADVKDSGEAIIGIK 293 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR-FEMLIDWGWFYFIAKPMFMLMSYFYN 355 LP +I + G + ++ A+ + ++ +D+G+ +FIA+P+F L+ + + Sbjct: 294 LPLTTIAANSEAVVGTSLWIGPKLQDQMAAVAQHLDLTVDYGYLWFIAQPLFQLLQFLHG 353 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 LVGN+G+AI+L T+ V+ + +PL+K QY S A M+ +QPK+ LRE+ Q + +AM Sbjct: 354 LVGNWGVAIILITMIVRGVMYPLSKAQYTSMAKMRLLQPKLTALRERLGDD-RQKMSQAM 412 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NPL GC+P+L+Q+P+F A+Y + S+E+RHAPF W+ DL+ D Sbjct: 413 MELYKEEKVNPLGGCFPLLIQMPIFIALYWTLMESVELRHAPFALWLTDLSVKD------ 466 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534 P+Y + P++M +M+ KMSP D Q ++ +MP+VF F F Sbjct: 467 -----PYY--------VLPLLMGATMWYIQKMSPTTVTDPMQQKVMQFMPIVFTFMFLWF 513 Query: 535 PAGLIIYWSWSNVISIVQQAVIMK 558 P+GL +YW SN+++I+QQ +I + Sbjct: 514 PSGLTLYWVVSNIVTIIQQTLIFR 537 >gi|154148946|ref|YP_001406234.1| putative inner membrane protein translocase component YidC [Campylobacter hominis ATCC BAA-381] gi|153804955|gb|ABS51962.1| inner membrane protein, 60 kDa [Campylobacter hominis ATCC BAA-381] Length = 532 Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 164/581 (28%), Positives = 275/581 (47%), Gaps = 92/581 (15%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 F+A+ L+ A+ FY + + N Q N+ A V A+ + Sbjct: 11 FIAVLLTFAFFIAYDYFY----LSKFQVPENNATGALIDKQSRNTEALVNEAPNAKNDKV 66 Query: 68 SPRVELKNPSLIGSINLKGAQF--DDLN-LRGYHLDVS---------------SNSPIVT 109 +P + ++I I K A F DDL + Y L+ S S SP+ Sbjct: 67 APAKAVNKRNVITQIKGKIANFSIDDLGRINSYVLNESKYKNDDKMQIDLVDLSKSPLPL 126 Query: 110 LLSPSNTK-NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 + SN N + YV++A+N+++ + NL+ + +N ++L Sbjct: 127 EMRFSNPDLNELAFKTPYVASASNLDITKNEQ--NLV-------------LTQNLGDVLV 171 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 + I+ + +KI + N+ + SP R P + + V G + D+S Sbjct: 172 TKNITFYPNGSYKISVQLNKNA--EFFISPGSR-----PSIVVDGYTVH-GVLIRKDDES 223 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQA 287 L + + D + S N +N SD+Y+ + F F ++ +S + Sbjct: 224 L--KMFEDGDVDSNENIQNAN-IAAASDRYYTTFFY-----DFTNKLNLVISSDSDKVSQ 275 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F+ + T G F G K + + +K R +I++GWF FI+KPMF Sbjct: 276 IFAKADKTFEAGG--------FIGPKHYDLLTGIDK-----RLSDVIEYGWFTFISKPMF 322 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 + + +N GN+G AI++ T+ V+ + +PL+ K +S MK++ PK+ EL+ ++K P Sbjct: 323 GFLKWLHNYTGNWGWAIVIMTLIVRAILYPLSYKGMLSMNKMKDLAPKMKELQARYKGDP 382 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + LQ +M++LYK +N+NP+ GC PILLQ+P+FFAIY+V+ ++E++ A + WI DL+ Sbjct: 383 KK-LQTSMMELYKKNNVNPMGGCLPILLQVPIFFAIYRVLLNAIELKGAEWAFWIHDLSV 441 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP Y I PI M + MF+Q K++P D Q I+ ++P++ Sbjct: 442 KDP------------YF-------ILPITMGILMFLQQKITPTNFTDPMQEKIMKFLPLI 482 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM---HGAEI 564 F F +FPAGL +YW+ +N+ SI+QQ I KM H A I Sbjct: 483 FTFFFMAFPAGLTLYWTVNNLASIIQQYTINKMFAKHKAAI 523 >gi|241759451|ref|ZP_04757555.1| inner membrane protein, 60 kDa [Neisseria flavescens SK114] gi|241320233|gb|EER56566.1| inner membrane protein, 60 kDa [Neisseria flavescens SK114] Length = 548 Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 127/414 (30%), Positives = 205/414 (49%), Gaps = 41/414 (9%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 ++L N + ++ + + YL I +TN++ + S RI+R + + Sbjct: 142 VRLSAPETNGLKIDKVYTFTKGSYLVNIRFDITNSNGQPVNLSADYRIVRDNSEPEGQGY 201 Query: 215 GVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SWLGISDKYWASVFI- 264 + G + + + +SD++ + S E+ WLG+ + ++ S +I Sbjct: 202 FTRSYVGPVVYTPEGGFQKVSFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWIL 261 Query: 265 -PSKETSFHSQFKYLSDGHAR----YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 P S S + D R Y A S TI G T L+AG + I Sbjct: 262 QPKDGQSVCSAGECNIDIKRRNDNLYSASVSVPLATIQAGTKAETAINLYAGPQATSVIA 321 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 + L + + D+G ++ A P+F L++ +N++GN+G AI++ T+ VK + +PL Sbjct: 322 NIADKLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLT 376 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 Y S A M+ PK+ ++EK+ V Q+AM+QLYK INPL GC P+LLQIPV Sbjct: 377 NASYRSMAKMRAAAPKLQAIKEKYGDDR-MVQQQAMMQLYKDEKINPLGGCLPMLLQIPV 435 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F +Y + S+E+R AP+ GWI DL+ D PFY I P+IM++ Sbjct: 436 FIGLYWALFASVELRQAPWLGWITDLSRPD-----------PFY--------ILPLIMAV 476 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +MF Q ++PP D QA ++ MP+VF FPAGL++YW +N+++I QQ Sbjct: 477 TMFAQTYLNPPSTDPMQAKMMKIMPLVFSIMFFFFPAGLVLYWVVNNLLTIAQQ 530 >gi|326319557|ref|YP_004237229.1| membrane protein insertase, YidC/Oxa1 family domain-containing [Acidovorax avenae subsp. avenae ATCC 19860] gi|323376393|gb|ADX48662.1| membrane protein insertase, YidC/Oxa1 family domain containing [Acidovorax avenae subsp. avenae ATCC 19860] Length = 566 Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 114/338 (33%), Positives = 187/338 (55%), Gaps = 45/338 (13%) Query: 230 VEQKYSDIEKSSISNF------HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 +E ++I+KSS + + + + +WL ++D +F+ +T+ +S S G Sbjct: 257 IESGKAEIDKSSTNGYVAMVQHYFATAWL-LADGIQRDLFVRKVDTNLYSVGMITSVGE- 314 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 I PG+S T LFAG P I + L+ P E++ D+GW +A Sbjct: 315 ------------IAPGQSKTLDARLFAG----PQIETMLEKLS-PGLELVKDYGWLTILA 357 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP++ L+ + ++ N+G +I+ + +K+ F+ L K Y S A MK I PKI E+RE+ Sbjct: 358 KPLYWLLEQLHKILNNWGWSIVGLVLLLKIAFYWLNAKAYASMAKMKAINPKIMEMRERL 417 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K P Q +Q+ M+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+EMR+AP+ GWI Sbjct: 418 KDKP-QQMQQEMMRIYREEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMRNAPWIGWIH 476 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL++ DP I P++M+ S +Q ++P P D QA ++ +M Sbjct: 477 DLSSPDPYFIL-------------------PLLMTASSLLQTALNPAPPDPMQAKMMWFM 517 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P++F FPAGL++YW +N++SI QQ +I K G Sbjct: 518 PLIFSVMFFFFPAGLVMYWLTNNILSIAQQWIINKRMG 555 >gi|89074710|ref|ZP_01161168.1| putative inner membrane protein translocase component YidC [Photobacterium sp. SKA34] gi|89049474|gb|EAR55035.1| putative inner membrane protein translocase component YidC [Photobacterium sp. SKA34] Length = 230 Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 94/225 (41%), Positives = 145/225 (64%), Gaps = 21/225 (9%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GW FIA P+ L+++ + +VGN+GIAI++ T+ V+ L +PL K QY S A M+ +QP Sbjct: 12 DYGWSSFIASPLHELLAFIHGIVGNWGIAIIILTLIVRGLMYPLTKAQYTSMAKMRMLQP 71 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 KI +RE+F Q + M++LYKT +NPL GC P+L+Q+P+F A+Y V+++S E+R Sbjct: 72 KIQAMRERFGDDR-QRQSQEMMELYKTEKVNPLGGCLPLLIQMPIFIALYTVLNLSTELR 130 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-AD 513 +APF+GWI++L+A D P+Y + PI+M +SMF K SP D Sbjct: 131 NAPFFGWIQNLSAQD-----------PYY--------VLPILMGISMFFIQKNSPSAVTD 171 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F FPAGL++YW SN+++++QQ +I + Sbjct: 172 PMQQKIMTFMPVIFTVFFLYFPAGLVLYWLTSNIVTLIQQTIIFR 216 >gi|219681403|ref|YP_002467788.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471077|ref|ZP_05635076.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254772755|sp|B8D8H9|OXAA_BUCA5 RecName: Full=Membrane protein oxaA gi|219624246|gb|ACL30401.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 532 Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 130/417 (31%), Positives = 215/417 (51%), Gaps = 45/417 (10%) Query: 154 TPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKP 207 PIK V KN +++++T L Y +I V N S + + + G+I + K Sbjct: 141 VPIKWVSKNG--VIYKKTFILKPNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKR 198 Query: 208 QTATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP 265 + F +Q G D + K+ I + + + W+ + +Y+A +IP Sbjct: 199 NVYSGNFALQTFRGAAYSSDDNKYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIP 258 Query: 266 ---SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 K T + S S H + + I I P + L+ G P I E Sbjct: 259 DNLGKNTIYTS-----SLDHDTAVIGYKSPIINIPPNSRSIIKSKLWIG----PEIQK-E 308 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 L P ++ +D+GW +F+++P+F L++ Y+++GN+G +I+L T ++ L +PL K Q Sbjct: 309 MKLVAPNLDLTVDYGWLWFLSQPLFKLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQ 368 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y+S A M+ +QPKI E++EKF + ++ Q+ MI LYK INPL G PI +Q+P+F + Sbjct: 369 YISMAKMRALQPKIQEIKEKFSKDKQRISQE-MILLYKKEKINPLGGFLPIFIQMPIFLS 427 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y ++ S+E+RHAPF WI DL++ DP + P+IM L+MF Sbjct: 428 LYYMLIGSVELRHAPFLLWIHDLSSQDPYYVL-------------------PVIMGLTMF 468 Query: 503 IQMKMSPPP--ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 K+S +D Q I+N+MPV+F FP+GL++Y+ SN+++I+QQ I+ Sbjct: 469 FIQKISSTNHISDPLQKKIMNFMPVIFTAFFLWFPSGLVLYYIISNLVTIIQQKFIL 525 >gi|319765065|ref|YP_004129002.1| membrane protein insertase, yidc/oxa1 family domain containing [Alicycliphilus denitrificans BC] gi|330827257|ref|YP_004390560.1| membrane protein insertase, YidC/Oxa1 family domain-containing [Alicycliphilus denitrificans K601] gi|317119626|gb|ADV02115.1| membrane protein insertase, YidC/Oxa1 family domain containing [Alicycliphilus denitrificans BC] gi|329312629|gb|AEB87044.1| membrane protein insertase, YidC/Oxa1 family domain containing [Alicycliphilus denitrificans K601] Length = 564 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 183/332 (55%), Gaps = 33/332 (9%) Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +E ++I+KSS +N ++ + Y+A+ ++ + F D + Y Sbjct: 255 IESGKAEIDKSS------TNGYVAMVQHYFATAWLLADGVQ-RDNFVRKVDANL-YSVGM 306 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 A I PG+S + LFAG P I + LA P E++ D+GW +AKP++ L Sbjct: 307 IAQLGEIAPGQSKSMDARLFAG----PQIETLLEKLA-PGLELVKDYGWLTILAKPLYWL 361 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + ++ N+G +I+ V +K+ F+ L K Y S A MK I P+I E+RE+ K P Q Sbjct: 362 LDQLHKVIANWGWSIVALVVLLKIAFYWLNAKAYASMAKMKAINPRIQEMRERLKDKP-Q 420 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+EMR AP+ GWI DL++ D Sbjct: 421 QMQQEMMRIYREEKVNPMGGCLPIMIQIPVFIALYWVLLSSVEMRGAPWIGWIHDLSSPD 480 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P F IL P++M+ S +Q ++P P D QA ++ MP++F Sbjct: 481 P------FFIL-------------PLLMTASSLLQTALNPAPPDPMQAKMMWLMPLMFSV 521 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++YW +N++SI QQ +I K G Sbjct: 522 MFFFFPAGLVLYWLTNNILSIAQQWIINKRMG 553 >gi|118474690|ref|YP_891743.1| putative inner membrane protein translocase component YidC [Campylobacter fetus subsp. fetus 82-40] gi|118413916|gb|ABK82336.1| inner membrane protein, 60 kDa [Campylobacter fetus subsp. fetus 82-40] Length = 531 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 94/233 (40%), Positives = 148/233 (63%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++GWF FIAKPMF+L+S+ +N +GN+G AI+ T+ ++++ FPL K VS Sbjct: 303 PNLVDVIEYGWFTFIAKPMFLLLSWLHNYIGNWGFAIVALTIVIRIVLFPLTYKGMVSMN 362 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K++ PK+ E++ K+K P + L +++LYK + NP+ GC PIL+QIP+FFAIY+V+ Sbjct: 363 KLKDLAPKMKEIQAKYKGDPSK-LNAHVMELYKKNGANPMGGCLPILIQIPIFFAIYRVL 421 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ AP+ WIKDLA DP Y I P++M +MFIQ K+ Sbjct: 422 LNAIELKGAPWIFWIKDLAIMDP------------YF-------ILPVLMGATMFIQQKI 462 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D Q I+ ++P++F F +FPAGL +YW +N+ S+ QQ V+ K+ Sbjct: 463 TPANFTDPMQEKIMKFLPLIFTFFFVTFPAGLTLYWFINNLCSVAQQLVVNKI 515 >gi|332702558|ref|ZP_08422646.1| Membrane protein oxaA [Desulfovibrio africanus str. Walvis Bay] gi|332552707|gb|EGJ49751.1| Membrane protein oxaA [Desulfovibrio africanus str. Walvis Bay] Length = 530 Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 114/336 (33%), Positives = 177/336 (52%), Gaps = 39/336 (11%) Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 E D+ K F W G+ Y+ P E + FK L Y+ Sbjct: 224 ESDTDDLAKGL--TFTGQVRWGGLLSNYFLLAIAPQTEPA---TFKALYSDQL-YRIAVE 277 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 ++I + PG + F G K + +L+ I +GWF IAKP+ + + Sbjct: 278 KSDILLDPGSEASVAADYFLGPKVRELLAAAPAELSRS-----ISYGWFSVIAKPLVLAL 332 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + Y+ N+G+AI+L TVF+KL+F+PL++K Y S MK +QP + ++REK Q+ Sbjct: 333 DWLYSFTHNWGVAIILLTVFIKLVFWPLSQKSYKSMNQMKKLQPMMAKIREKHADDRVQM 392 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF--------WGWI 462 Q+ M+QLY+T+ +NP+ GC P++LQIPVF +Y + ++E+RHA F + W+ Sbjct: 393 NQE-MMQLYRTYKVNPMGGCLPMVLQIPVFLGLYNALMGAIELRHAAFIEHLPFTNYIWL 451 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+A D PFY I P+IM +MF+Q K++P D Q I+ + Sbjct: 452 ADLSAKD-----------PFY--------ITPLIMGATMFLQQKLTPAAGDPTQQKIMMF 492 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MP++F F +FPAGL++YW +NV+SI QQ +M+ Sbjct: 493 MPLIFTFMFLNFPAGLVLYWLVNNVLSIAQQWWLMR 528 >gi|187735748|ref|YP_001877860.1| 60 kDa inner membrane insertion protein [Akkermansia muciniphila ATCC BAA-835] gi|187425800|gb|ACD05079.1| 60 kDa inner membrane insertion protein [Akkermansia muciniphila ATCC BAA-835] Length = 628 Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 104/321 (32%), Positives = 183/321 (57%), Gaps = 27/321 (8%) Query: 250 SWLGISDKYWASVFIPSKET------SFHSQFKYLSDGHARYQAKFSANEI---TILPGK 300 ++ G+ +Y+A++ +P ++ + +F +G+ A I T+ P + Sbjct: 278 TYAGVMSQYYATILLPQDQSRGSTVYATRQEFPLTHEGNTLVPGVTVAMGIPNLTMAPNE 337 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 T T ++ G P + Y +DL + P ++ +GW F++ PM L++ F+ G Sbjct: 338 IKTLTYDIYTG----PKFNAYLRDLNLSYPAISDIMAYGWLVFLSVPMNWLLNLFHGWFG 393 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+ T+ V+ L +PL KK Y++ M +QP++ +L+EK+ PQ + M++L Sbjct: 394 NWGVAIICMTIVVRALIWPLHKKSYMAMKRMSLVQPEMVKLKEKYPDD-PQKVNMEMMKL 452 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y+ + INP +GC P+L+QIP+FFA Y+V+ S E+R PF W+ DL+ P + LFG Sbjct: 453 YQKYGINPASGCVPMLIQIPIFFAFYRVLQYSAELRGQPFCLWMTDLSL--PDTVGHLFG 510 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 + + I P+IM+++M IQM+M+P ++ Q +I+N MPV+F +F + L Sbjct: 511 V---------PINILPLIMAVTMIIQMRMTPQAGERSQRIIMNLMPVMFFLFCYNFASAL 561 Query: 539 IIYWSWSNVISIVQQAVIMKM 559 +YW+ N+ISI Q A+I ++ Sbjct: 562 ALYWTTQNLISIGQTALIRRL 582 >gi|34499859|ref|NP_904074.1| putative inner membrane protein translocase component YidC [Chromobacterium violaceum ATCC 12472] gi|81711621|sp|Q7NPT8|OXAA_CHRVO RecName: Full=Inner membrane protein oxaA gi|34332914|gb|AAQ62063.2| integral membrane protein, 60 kDa [Chromobacterium violaceum ATCC 12472] Length = 545 Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 155/564 (27%), Positives = 259/564 (45%), Gaps = 56/564 (9%) Query: 11 IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPR 70 + LSV I++ W N Y P+ K T N V A L+ R Sbjct: 10 VLLSVGILFGW-NEYFMPKHTPQQQAAKTQATTGAANNVAQP-------ADANKLTRGQR 61 Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 +++K + I+ G L L + P L + K Y A+ V+ A Sbjct: 62 IQVKTDLVEAEIDTVGGDLRSLKLLKHGAAEDHKQPF--QLFEDSAKRVYVAQTGLVA-A 118 Query: 131 NNIELPNSNTVW--NLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVT 187 +N LP TV+ + S ++ T +KL +AN + + + ++ Y + + Sbjct: 119 SNPALPTHKTVFTSDKPSYQLTGDTLEVKLTAPDANGVKVSKVYTFKKNSYEIGVRYDIV 178 Query: 188 NNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 N + + R++R P+ G + + + D+ K ++ Sbjct: 179 NGGAAPLAPTAYYRLLRDSQAPEGEGRMAHTYTGPAVYTSEHKFQKVSFDDLAKGK-GDY 237 Query: 246 HES--NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA---------NEI 294 ++ + W+ + Y+ S +I K S K + R++ K +A + Sbjct: 238 AKTTTDGWVAMLQHYFMSAWI-LKPLDGASVCK--DERSCRFELKETAGLNSAAALVDYA 294 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 T+ PGKS++ + L+AG +E+ I + E D+G FY A P+F L+ + Sbjct: 295 TVAPGKSLSVSVPLYAGPEEYNIISKLADGM-----EYAKDFGIFYIFASPLFWLLVKLH 349 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 LV N+G AI+L T+ VK +F+PL Y S A MK + P+++ L+ + + Q+A Sbjct: 350 GLVSNWGWAIVLLTLTVKAVFYPLTAASYRSMAKMKALAPRLERLKAQHGDDRMK-FQQA 408 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 ++++YKT +NPL GC P+L+QIPVF +Y + S+E+R AP+ W DLA D Sbjct: 409 VMEMYKTEKVNPLGGCLPMLIQIPVFIGLYWALLASVELRGAPWVLWYTDLARPD----- 463 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 P+Y I P+IM+ +MF+Q ++PPPAD QA ++ MP+ F F Sbjct: 464 ------PYY--------ILPVIMAATMFLQTFLNPPPADPMQAKMMKIMPLAFSALFFFF 509 Query: 535 PAGLIIYWSWSNVISIVQQAVIMK 558 PAGL++Y+ +NV+S+ QQ I K Sbjct: 510 PAGLVLYYVVNNVLSMAQQWFINK 533 >gi|305432097|ref|ZP_07401264.1| inner membrane protein [Campylobacter coli JV20] gi|304445181|gb|EFM37827.1| inner membrane protein [Campylobacter coli JV20] Length = 531 Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 120/361 (33%), Positives = 194/361 (53%), Gaps = 44/361 (12%) Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGIS-DKYWASVF 263 ++P A +++ V V+ D+ + Y D + N N+W+ + D+Y+A+ F Sbjct: 206 YRPSIAVDSYTVHGAL--VMDDQETI-HTYEDGDMDKDENI--KNAWMTSAFDRYYAAFF 260 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 +F A+ P + + N AG P H + Sbjct: 261 Y-----NFEKPLNVTISKDAQNN-----------PLVFVMSDNEFKAGGYMGPKEHVILR 304 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 + PR E ++++GWF FIAKPMF +++ +N +GN+G AI++ + ++++ FPL K Sbjct: 305 SID-PRLEAVVEYGWFTFIAKPMFEFLNFLHNHIGNWGWAIVIMVLIIRIILFPLTYKSM 363 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +S +K++ PK+ ELRE++K PQ + M++LYK H NP++GC PILLQIP+FFAI Sbjct: 364 ISMNKLKDLAPKMKELRERYK-GDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAI 422 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y+V+ ++E++ AP+ WI DL+ DP I PI+M ++MFI Sbjct: 423 YRVLLNAIELKAAPWAFWIHDLSVMDPYFIL-------------------PILMGVTMFI 463 Query: 504 QMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 Q ++P D QA I+ ++P++F F +FPAGL +YW +N+ S+VQQ VI KM Sbjct: 464 QQLITPMTIQDPMQAKIMKFLPIIFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKMFAK 523 Query: 563 E 563 E Sbjct: 524 E 524 >gi|258544268|ref|ZP_05704502.1| YidC/Oxa1 family membrane protein insertase [Cardiobacterium hominis ATCC 15826] gi|258520506|gb|EEV89365.1| YidC/Oxa1 family membrane protein insertase [Cardiobacterium hominis ATCC 15826] Length = 557 Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 110/336 (32%), Positives = 180/336 (53%), Gaps = 30/336 (8%) Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 S + Y I+ S N + W+ + Y+ IP++ + F + A Sbjct: 234 SYDDDPYEKIKLGSKFNTNTETGWVAMIQHYFLGAIIPAQGQP-QAFFTNTNASSGDNFA 292 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL--AIPRFEMLIDWGWFYFIAKP 345 + PG S + T+ ++ G K +KDL P + +D+G+ + I +P Sbjct: 293 GVVGASSEVAPGGSTSFTSQIYIGPK-------IQKDLKAVAPNLDKTVDYGFLFMIGQP 345 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 MF ++++ + ++ N+G AI++TT+ +KLLFF + Y S A M+ + P++ ++E++ Sbjct: 346 MFYVINFIHGILHNWGWAIIVTTLLIKLLFFTPSAWAYKSMAKMRRLGPEMQRIKERYGD 405 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q AM++LYK +NP +GC P+LLQIP F A Y V+ S+E+RHAP+ GWI+DL Sbjct: 406 DR-QAASMAMMKLYKDEKVNPASGCLPMLLQIPFFIAFYWVLVESVELRHAPWLGWIQDL 464 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 +A D P+Y I PII + MF+Q K++PPP D QA ++ +P+ Sbjct: 465 SAMD-----------PYY--------ILPIINAALMFLQQKLNPPPPDPTQAKVMMMLPL 505 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 VF FP+GL++YW+ SN IVQQ ++ K +G Sbjct: 506 VFGIMFMWFPSGLVLYWTVSNAFGIVQQYIMNKRYG 541 >gi|222112701|ref|YP_002554965.1| yidc translocase/secretase [Acidovorax ebreus TPSY] gi|221732145|gb|ACM34965.1| YidC translocase/secretase [Acidovorax ebreus TPSY] Length = 569 Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 120/343 (34%), Positives = 188/343 (54%), Gaps = 55/343 (16%) Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR--YQA 287 +E ++I+KSS SN ++ + Y+A+ ++ L DG R + Sbjct: 260 IENGKAEIDKSS------SNGYVAMVQHYFATAWL-------------LGDGVQRDNFVR 300 Query: 288 K-----FSANEIT----ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 K +S IT I PG+S LFAG P I + LA P E++ D+GW Sbjct: 301 KVDTNLYSVGMITPLGEIAPGQSKAVDARLFAG----PQIETLLEKLA-PGLELVKDYGW 355 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +AKP++ L+ + ++GN+G +I+ +K+ F+ L K Y S A MK I P+I E Sbjct: 356 LTILAKPLYWLLDQLHKVLGNWGWSIVALVFLLKIAFYWLNAKAYASMAKMKAINPRIME 415 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +RE+ K P Q +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+EMR+AP+ Sbjct: 416 MRERLKDKP-QQMQQEMMRIYREEKVNPMGGCLPIMIQIPVFIALYWVLLSSVEMRNAPW 474 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 GWIKDL++ D PF+ I P++M+LS +Q ++P P D QA Sbjct: 475 IGWIKDLSSPD-----------PFF--------ILPLLMTLSSLLQTALNPAPPDPMQAK 515 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ MP++F FPAGL++YW +N++SI QQ +I G Sbjct: 516 MMWLMPLMFSVMFFFFPAGLVLYWLTNNILSIAQQWIINTRMG 558 >gi|154174780|ref|YP_001408435.1| putative inner membrane protein translocase component YidC [Campylobacter curvus 525.92] gi|112802923|gb|EAU00267.1| inner membrane protein OxaA [Campylobacter curvus 525.92] Length = 518 Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 93/233 (39%), Positives = 146/233 (62%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 PR +I++GWF FIAKPMF + + + +GN+G AI++ T+ ++++ FPL K +S Sbjct: 295 PRLTDIIEYGWFTFIAKPMFAFLDFLHKYIGNWGWAIVVLTLVIRIILFPLTYKGMLSMN 354 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ E++ K+K PQ L M++LYK + NP+ GC PILLQIPVFFAIY+V+ Sbjct: 355 KLKELAPKVKEIQAKYK-GDPQKLNTHMMELYKKNGANPMGGCLPILLQIPVFFAIYRVL 413 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ AP+ WI DL+A D PF+ I PI+M +MF+Q ++ Sbjct: 414 LNAIELKGAPWILWIHDLSAMD-----------PFF--------ILPILMGATMFLQQRL 454 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D Q I+ ++P++F F +FPAGL +YW +NV S++QQ + K+ Sbjct: 455 TPTTFTDPMQEKIMKYLPLIFTFFFVTFPAGLTLYWFVNNVCSVIQQIFVNKL 507 >gi|15616645|ref|NP_239857.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11131221|sp|P57131|OXAA_BUCAI RecName: Full=Membrane protein oxaA gi|25299099|pir||G84931 60 kD inner-membrane protein [imported] - Buchnera sp. (strain APS) gi|10038708|dbj|BAB12743.1| 60 kD inner-membrane protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 532 Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 129/417 (30%), Positives = 215/417 (51%), Gaps = 45/417 (10%) Query: 154 TPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKP 207 PIK + KN +++++T L Y +I V N S + + + G+I + K Sbjct: 141 VPIKWLSKNG--VIYKKTFILKPNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKR 198 Query: 208 QTATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP 265 + F +Q G D + K+ I + + + W+ + +Y+A +IP Sbjct: 199 NVYSGNFALQTFRGAAYSSDDNKYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIP 258 Query: 266 ---SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 K T + S S H + + I I P + L+ G P I E Sbjct: 259 DNLGKNTIYTS-----SLDHDTAVIGYKSPIINIPPNSRSIIKSKLWIG----PKIQK-E 308 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 L P ++ +D+GW +F+++P+F L++ Y+++GN+G +I+L T ++ L +PL K Q Sbjct: 309 MKLVAPNLDLTVDYGWLWFLSQPLFKLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQ 368 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y+S A M+ +QPKI E++EKF + ++ Q+ MI LYK INPL G PI +Q+P+F + Sbjct: 369 YISMAKMRALQPKIQEIKEKFSKDKQRISQE-MILLYKKEKINPLGGFLPIFIQMPIFLS 427 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y ++ S+E+RHAPF WI DL++ DP + P+IM L+MF Sbjct: 428 LYYMLIGSVELRHAPFLLWIHDLSSQDPYYVL-------------------PVIMGLTMF 468 Query: 503 IQMKMSPPP--ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 K+S +D Q I+N+MPV+F FP+GL++Y+ SN+++I+QQ I+ Sbjct: 469 FIQKISSTNHISDPLQKKIMNFMPVIFTAFFLWFPSGLVLYYIISNLVTIIQQKFIL 525 >gi|121606995|ref|YP_984324.1| 60 kDa inner membrane insertion protein [Polaromonas naphthalenivorans CJ2] gi|120595964|gb|ABM39403.1| protein translocase subunit yidC [Polaromonas naphthalenivorans CJ2] Length = 569 Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 135/470 (28%), Positives = 233/470 (49%), Gaps = 65/470 (13%) Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP--TTPIKLVFKNAN----NILF 168 +T Y A+ ++ +N P T+ ++ G+ L +++ F++A+ +L Sbjct: 131 STNRVYVAQTGLIAGSNGGTFPTHKTLMTVVPGERLLKDGQNELQVKFESADMGGVKLLK 190 Query: 169 ERTISLDEHYL---FKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAV 223 TI + L +I++T T Q+ +++R +KP ++ + G Sbjct: 191 TYTIKRGAYDLAVRHEIINTGTTPVAPQLYL----QLVRDGNKPPGESSFYSTFTGPAIY 246 Query: 224 LGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 K + ++ DIE + + +N ++ + Y+AS +I L DG Sbjct: 247 TEAKKYQKVEFKDIENNKVDVEKQATNGYVAMVQHYFASAWI-------------LPDGL 293 Query: 283 AR--YQAKFSAN-----EIT----ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 R + K N IT I PG + T + F G +E + P E Sbjct: 294 KRDLFLRKVDTNLYAVGMITPLDPIAPGATKTVDSKFFVGPQEEKVLEALA-----PGLE 348 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 ++ D+GW +AKP++ L+ ++ + N+G +I+ + +K+ F+ L K Y S A MK Sbjct: 349 LVKDYGWLTILAKPLYWLLDKLHSFIQNWGWSIVALVLLLKIAFYWLNAKAYASMAKMKA 408 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I PKI E+RE+ K P Q +Q+AM+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+ Sbjct: 409 INPKITEMRERLKDKP-QEMQQAMMKIYREEKVNPMGGCFPIMIQIPVFIALYWVLLSSV 467 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 EMR AP+ WI+DL++ DP I P++M+L+ +Q ++P P Sbjct: 468 EMRGAPWILWIRDLSSPDPYFIL-------------------PVVMALTTMLQTALNPAP 508 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 D QA ++ +MP++F FPAGL++YW +N++SI QQ VI G Sbjct: 509 PDPMQAKLMWFMPLIFSVMFFFFPAGLVLYWITNNILSITQQWVINTRMG 558 >gi|219681959|ref|YP_002468343.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254772756|sp|B8D6T3|OXAA_BUCAT RecName: Full=Membrane protein oxaA gi|219621692|gb|ACL29848.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085765|gb|ADP65847.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086342|gb|ADP66423.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 532 Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 129/417 (30%), Positives = 215/417 (51%), Gaps = 45/417 (10%) Query: 154 TPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKP 207 PIK + KN +++++T L Y +I V N S + + + G+I + K Sbjct: 141 VPIKWLSKNG--VIYKKTFILKPNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKR 198 Query: 208 QTATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP 265 + F +Q G D + K+ I + + + W+ + +Y+A +IP Sbjct: 199 NVYSGNFALQTFRGAAYSSDDNKYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIP 258 Query: 266 ---SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 K T + S S H + + I I P + L+ G P I E Sbjct: 259 DNLGKNTIYTS-----SLDHDTAVIGYKSPIINIPPNSRSIIKSKLWIG----PEIQK-E 308 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 L P ++ +D+GW +F+++P+F L++ Y+++GN+G +I+L T ++ L +PL K Q Sbjct: 309 MKLVAPNLDLTVDYGWLWFLSQPLFKLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQ 368 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y+S A M+ +QPKI E++EKF + ++ Q+ MI LYK INPL G PI +Q+P+F + Sbjct: 369 YISMAKMRALQPKIQEIKEKFSKDKQRISQE-MILLYKKEKINPLGGFLPIFIQMPIFLS 427 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y ++ S+E+RHAPF WI DL++ DP + P+IM L+MF Sbjct: 428 LYYMLIGSVELRHAPFLLWIHDLSSQDPYYVL-------------------PVIMGLTMF 468 Query: 503 IQMKMSPPP--ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 K+S +D Q I+N+MPV+F FP+GL++Y+ SN+++I+QQ I+ Sbjct: 469 FIQKISSTNHISDPLQKKIMNFMPVIFTAFFLWFPSGLVLYYIISNLVTIIQQKFIL 525 >gi|296314151|ref|ZP_06864092.1| membrane protein insertase, YidC/Oxa1 family [Neisseria polysaccharea ATCC 43768] gi|296839184|gb|EFH23122.1| membrane protein insertase, YidC/Oxa1 family [Neisseria polysaccharea ATCC 43768] Length = 545 Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 137/488 (28%), Positives = 223/488 (45%), Gaps = 43/488 (8%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV 141 I+ K L L Y + + N P L + + Y A+ + + N L N Sbjct: 67 IDEKSGDLRRLTLLKYKANGNENKPFS--LFDDSKEYTYVAQSELLDAQGNNILKGVNFT 124 Query: 142 WNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRG 200 + ++L N + ++ + + YL + +TN S S Sbjct: 125 AAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYLVNVRFDITNTSGKPANLSADY 184 Query: 201 RIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SW 251 RI+R Q + + G + + + +SD++ + S +E+ W Sbjct: 185 RIVRDHSQPEGQGYFTRSYLGPVVYTPEDKFQKVSFSDLDDDAKSGKNEAEYARKTQTGW 244 Query: 252 LGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR----YQAKFSANEITILPGKSITTT 305 LG+ + ++ S +I P S + D R Y S I G + Sbjct: 245 LGMIEHHFMSAWILQPKGGQSVCAAGDCRIDIKRRNDNLYSTSVSVPLAAIQNGAKSEAS 304 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 L+AG + I + L + + D+G ++ A P+F L++ +N++GN+G AI+ Sbjct: 305 INLYAGPQTTSVIANIADKLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAIV 359 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T+ VK + +PL Y S A M+ PK+ ++EK+ Q+AM+QLYK IN Sbjct: 360 VLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDR-MAQQQAMMQLYKDEKIN 418 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC P+LLQIPVF +Y + S+E+R AP+ GWI DL+ AD P+Y Sbjct: 419 PLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRAD-----------PYY-- 465 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 I PIIM+ +MF Q ++PPP D QA ++ MP++F FPAGL++YW + Sbjct: 466 ------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLIFSVMFFFFPAGLVLYWVVN 519 Query: 546 NVISIVQQ 553 N+++I QQ Sbjct: 520 NLLTIAQQ 527 >gi|88860620|ref|ZP_01135257.1| preprotein translocase [Pseudoalteromonas tunicata D2] gi|88817215|gb|EAR27033.1| preprotein translocase [Pseudoalteromonas tunicata D2] Length = 545 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 113/341 (33%), Positives = 180/341 (52%), Gaps = 29/341 (8%) Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 GF +K + +SDIE ++S ++ Y+ S ++P ++ + L Sbjct: 222 GFAYGAFEKPYEKYSFSDIEDKNLS-IDTQGGYISFIQHYFVSAWVPKQDEQNTIYSRKL 280 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 SD A K TI G+ + + G K+ + DL + +D+G Sbjct: 281 SDNSAMMGIK--GPLTTIEAGQQQQLASTYYMGPKDQEALKALHDDL-----HLTVDYGI 333 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +FI++P+F L+ + Y L+GN+G+AI+ T+ VK +PL K QY S A M+N+QPKI Sbjct: 334 LWFISQPLFALLKWLYALLGNWGLAIISITIIVKTFLYPLTKAQYTSMAKMRNLQPKIMA 393 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+EK + Q +AM+++Y+ +NP+ GC+P+LLQ+P+F A++ V S+E+RHA F Sbjct: 394 LKEKHGED-KQKFGQAMMEMYRKEKVNPMGGCFPLLLQMPIFLALFYVFLESVELRHAEF 452 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQA 517 WI DL+A D P+Y I PI+ SMF+ K+ P D Q Sbjct: 453 GLWIMDLSAKD-----------PYY--------ILPILFGASMFLTQKLQPMTVTDPMQQ 493 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ +MPV+F FP+GL++YW SN+ISI Q +I + Sbjct: 494 KMMTYMPVIFSVFFLWFPSGLVLYWLVSNLISIAQMLIIYR 534 >gi|118594210|ref|ZP_01551557.1| preprotein translocase subunit yidC [Methylophilales bacterium HTCC2181] gi|118439988|gb|EAV46615.1| preprotein translocase subunit yidC [Methylophilales bacterium HTCC2181] Length = 546 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 124/320 (38%), Positives = 188/320 (58%), Gaps = 20/320 (6%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + D++K S S+ W+GI +Y+A +I ETS K ++D Y + A Sbjct: 229 FDDVDKKPFS-LVTSDGWIGIIQRYFAGAWILPSETSRELYSKKVADN--IYASGTLAFL 285 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 I PG + T+ LF G + + + L+ +D+GW FIA P+F ++S Sbjct: 286 GEIDPGSTKLFTSELFVGPQSKDDLAAAAEGLSYA-----VDYGWLTFIASPLFSVLSGI 340 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 V N+G+AI+L T+ +KLLF+PL+ Y S A M+ + P++ ++EKF Q +Q+ Sbjct: 341 QKAVINWGVAIILLTILIKLLFYPLSAASYRSMAQMREVAPRLQSMKEKFGDD-KQKMQQ 399 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 AM++LYKT INPL GC PIL+QIPVF A+Y V+ S+E+R APF +I DL+ D Sbjct: 400 AMMELYKTEKINPLGGCLPILVQIPVFIALYWVLLGSVELRGAPFL-YISDLSVPD---- 454 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 +LFG L F+ +G P++M+ SMF+QMK++P P D QA ++ MP++F Sbjct: 455 -SLFGTL-----WFVPLGPLPLLMAASMFLQMKLNPKPTDPMQARLMMMMPIIFSIFFFF 508 Query: 534 FPAGLIIYWSWSNVISIVQQ 553 FPAGL++YW +N++SI QQ Sbjct: 509 FPAGLVLYWLVNNILSIGQQ 528 >gi|332968628|gb|EGK07682.1| YidC/Oxa1 family membrane protein insertase [Kingella kingae ATCC 23330] Length = 556 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 134/559 (23%), Positives = 255/559 (45%), Gaps = 55/559 (9%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 F+A ALS +I+ W+ + P+++ V+ A ALS Sbjct: 7 FIAFALSFLILMGWEQMFPRPQVQTTGANATATSQVQ----------------AASALSE 50 Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 + + ++ ++ I+ K L L Y+ N V ++ + + Sbjct: 51 TVPITVQTDTVQAIIDEKSGDLRGLTLNQYNAAADENQKFVLFADGKYLAQSHLLDANGK 110 Query: 128 STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTV 186 + + + + + L K+ ++L + A+ + ++ + ++ YL + V Sbjct: 111 NLLDGVSFSSPQKSYTLNGDKL-----EVRLTAQAASGVQVDKVYTFHKNSYLINVRFDV 165 Query: 187 TNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSIS 243 N ++ +++R KP+ G + D ++ +SD++ S Sbjct: 166 KNTGSSAVKVGTSYQVVRDNSKPEGEGWFMQSYHGPVVYTPDADEFQKVTFSDLDDDFAS 225 Query: 244 N-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHARYQAKFSANEI 294 + ++G+ Y+ S +I P++ + +Q D R + + A Sbjct: 226 GKDTAEYQRKATGGYVGMIQHYFVSAWIMQPAQGDNVCAQAACTVDIKKRSEQLYQAGVN 285 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 + T A P + K +A P F++ D+G + A P+F L+++ + Sbjct: 286 VAAADVAAGATQSFGANLYAGPQVTSVLKTVA-PEFDLTKDYGRVHIFAAPLFALLNWLH 344 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 L+GN+G AI+ T+ VK + +PL K Y S A M+ + PK++ L++++ + LQ+A Sbjct: 345 GLIGNWGWAIVFLTMIVKAVLYPLNDKAYKSMAKMRAVAPKMEALKKQYGEDR-MGLQQA 403 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LY+ INPL GC P+LLQ+P+F +Y +I +S+E+R AP+ GWI DL+ DP I Sbjct: 404 MMKLYRDEKINPLGGCLPMLLQMPIFIGLYWMIFLSVELRQAPWLGWITDLSRPDPWFIL 463 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 PI+M+ +M+ Q ++PPP+D QA ++ MP++F F Sbjct: 464 -------------------PILMAATMWFQTTLNPPPSDPMQAQMIKIMPLIFSIMFFFF 504 Query: 535 PAGLIIYWSWSNVISIVQQ 553 PAGL++Y+ +N+++I QQ Sbjct: 505 PAGLVLYYVINNLLTIAQQ 523 >gi|261378187|ref|ZP_05982760.1| membrane protein insertase, YidC/Oxa1 family [Neisseria cinerea ATCC 14685] gi|269145655|gb|EEZ72073.1| membrane protein insertase, YidC/Oxa1 family [Neisseria cinerea ATCC 14685] Length = 545 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 136/488 (27%), Positives = 227/488 (46%), Gaps = 43/488 (8%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV 141 I+ K + L Y + N P TL + S + Y A+ + + N L N Sbjct: 67 IDEKSGDLRQMTLLKYKANGDENKPF-TLFNDSK-EYTYVAQSELLDAQGNNILKGVNFT 124 Query: 142 WNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRG 200 + ++L N + ++ + + YL + +TN S S Sbjct: 125 AAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYLVNVRFDITNTSGKPANLSADY 184 Query: 201 RIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SW 251 RI+R + + + + G + + + +SD++ + S +E+ W Sbjct: 185 RIVRDRSEPEGQGYFTRSFVGPVVYTPEGKFQKVNFSDLDDDAKSGKNEAEYARKTQTGW 244 Query: 252 LGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR----YQAKFSANEITILPGKSITTT 305 LG+ + ++ S +I P S + D R Y S I G + Sbjct: 245 LGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDNLYSTSVSVPLAAIQNGAKSEAS 304 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 L+AG + I + +L + + D+G ++ A P+F L++ +N++GN+G AI+ Sbjct: 305 INLYAGPQTTSVIANIADNLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAII 359 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T+ VK + +PL Y S A M+ PK+ ++EK+ Q+AM+QLYK IN Sbjct: 360 VLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDR-MAQQQAMMQLYKDEKIN 418 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC P+LLQIPVF +Y + S+E+R AP+ GWI DL+ +D P+Y Sbjct: 419 PLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRSD-----------PYY-- 465 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 I P+IM+++MF Q ++PPP D QA ++ MP+VF FPAGL++YW + Sbjct: 466 ------ILPVIMAVTMFAQTFLNPPPTDPMQAKMMKIMPLVFSAMFFFFPAGLVLYWVVN 519 Query: 546 NVISIVQQ 553 N+++I QQ Sbjct: 520 NLLTIAQQ 527 >gi|91790727|ref|YP_551679.1| protein translocase subunit yidC [Polaromonas sp. JS666] gi|91699952|gb|ABE46781.1| protein translocase subunit yidC [Polaromonas sp. JS666] Length = 580 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 139/483 (28%), Positives = 239/483 (49%), Gaps = 62/483 (12%) Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIK 157 D+++ LL S T Y A+ +++ P T+ ++ G+ + ++ Sbjct: 128 DMANTDAGFVLLDES-TNRVYVAQTGLIASGTGGTFPTHKTLMTVVPGERSLKDGQNELQ 186 Query: 158 LVFKNAN--NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATN 212 + F++A+ + +T +L Y + V N + +++R +KP ++ Sbjct: 187 VKFESADLGGVKLVKTYTLKRGSYDIAVRHDVINTGSAPVAPQLYMQLVRDGNKPPGESS 246 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSF 271 + G K + ++ DIE + + +N ++ + Y+A+ +I Sbjct: 247 FYSTFTGPAIYTEAKKYQKVEFKDIENNKVDVEKQATNGYVAMVQHYFAAAWI------- 299 Query: 272 HSQFKYLSDGHAR--YQAKFSANEI---------TILPGKSITTTNFLFAGAKEFPTIHH 320 L+DG R + K AN +I PG + T + LF G +E Sbjct: 300 ------LADGLKRDLFLRKVDANLYAVGLITPLDSIAPGATKTIDSRLFVGPQE------ 347 Query: 321 YEKDLAI--PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 EK L P E++ D+GW +AKP++ L+ + + N+G +I+ + +K+ F+ L Sbjct: 348 -EKKLEALAPGLELVKDYGWLTILAKPLYWLLDKLHGFLLNWGWSIVALVLLLKIAFYWL 406 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 K Y S A MK I PKI E+RE+ K P Q +Q+AM+++Y+ +NP+ GC+PI++QIP Sbjct: 407 NAKAYASMAKMKAINPKIMEMRERLKDKP-QEMQQAMMKIYREEKVNPMGGCFPIMVQIP 465 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 VF A+Y V+ S+EMR+AP+ WI DL+A DP F IL P++M+ Sbjct: 466 VFIALYWVLLSSVEMRNAPWVLWIHDLSAPDP------FFIL-------------PVLMT 506 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 L+ +Q ++P P D QA ++ +MP++F FPAGL++YW +N++SI QQ VI Sbjct: 507 LTTMLQTALNPAPPDPMQAKLMWFMPLIFSVMFFFFPAGLVLYWITNNILSIAQQWVINT 566 Query: 559 MHG 561 G Sbjct: 567 RMG 569 >gi|325139560|gb|EGC62100.1| inner membrane protein OxaA [Neisseria meningitidis CU385] Length = 545 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 136/488 (27%), Positives = 225/488 (46%), Gaps = 43/488 (8%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV 141 I+ K + L Y + + N P L + + Y A+ + + N L N Sbjct: 67 IDEKSGDLRQMTLLKYKANGNENKPFS--LFDDSKEYTYVAQSELLDAQGNNILKGVNFT 124 Query: 142 WNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRG 200 + ++L N + ++ + + YL + +TN S S Sbjct: 125 AAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYLVNVRFDITNTSGKPANLSADY 184 Query: 201 RIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SW 251 RI+R Q + + G + + + +SD++ + S +E+ W Sbjct: 185 RIVRDHSQPEGQGYFTRSYLGPVVYTPEDKFQKVSFSDLDDDAKSGKNEAEYARKTQTGW 244 Query: 252 LGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR----YQAKFSANEITILPGKSITTT 305 LG+ + ++ S +I P S + D R Y S I G + Sbjct: 245 LGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDNLYSTSVSVPLAAIQNGTKSEAS 304 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 L+AG + I + +L + + D+G ++ A P+F L++ +N++GN+G AI+ Sbjct: 305 INLYAGPQTTSVIANIADNLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAIV 359 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T+ VK + +PL Y S A M+ PK+ ++EK+ Q+AM+QLYK IN Sbjct: 360 VLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDR-MAQQQAMMQLYKDEKIN 418 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC P+LLQIPVF +Y + S+E+R AP+ GWI DL+ +D P+Y Sbjct: 419 PLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRSD-----------PYY-- 465 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 I PIIM+++MF Q ++PPP D QA ++ MP+VF FPAGL++YW + Sbjct: 466 ------ILPIIMAVTMFAQTFLNPPPTDPMQAKMMKIMPLVFSVMFFFFPAGLVLYWVVN 519 Query: 546 NVISIVQQ 553 N+++I QQ Sbjct: 520 NLLTITQQ 527 >gi|319788688|ref|YP_004148163.1| membrane protein insertase, YidC/Oxa1 family [Pseudoxanthomonas suwonensis 11-1] gi|317467200|gb|ADV28932.1| membrane protein insertase, YidC/Oxa1 family [Pseudoxanthomonas suwonensis 11-1] Length = 567 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 129/424 (30%), Positives = 209/424 (49%), Gaps = 48/424 (11%) Query: 153 TTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSP-RGRIMRH---KP 207 + + V++ N + RT L Y + D V N +P +G++ R KP Sbjct: 168 SVEVPFVWQGDNGVQIRRTYVLSRGAYAVTVRDEVVNAGS-----APWQGQVYRQLVRKP 222 Query: 208 QTATNTFGVQEGFI---AVLGDKSLVEQKYSD--IEKSSISNFHESNSWLGISDKYWASV 262 + E F A D S +K+ + IE + N SN W+ + ++ + Sbjct: 223 PVIERGYTSPESFSFNGAAWYDGSYDRRKFDEDYIEDGKL-NLQTSNGWVAMLQHHFFTA 281 Query: 263 FIPSKETSFHS-QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 ++P+ + + D R + AN + + PG + T+ L+ G K I Sbjct: 282 WLPAGTQQAGTISLDQVGD---RALVREVANPLVVAPGSTATSEARLYVGPKLVSEI--- 335 Query: 322 EKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 + +P E +D+ F +A + +F ++S+ Y+L GN+G AI+ V VK L +PL Sbjct: 336 -RAQGVPGLERAVDYSQFTILAVLGEGLFWVLSHMYDLFGNWGWAIIGLVVVVKALMYPL 394 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 + QY S A M+ QP+I +L+E++ + Q Q AM++LYK INP+ GC PIL+Q+P Sbjct: 395 SAAQYKSFAKMRKFQPRIQQLKERYGEDR-QKFQMAMMELYKKEKINPMGGCLPILVQMP 453 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 VF A+Y V+ S+E+RHAP+ WI+DL A DP I P+I Sbjct: 454 VFLALYWVLVESVELRHAPWILWIQDLTARDPFFIL-------------------PVINV 494 Query: 499 LSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M+ K+ P P D Q ++ +MP+VF ++ FPAGL++YW + + ++QQ +M Sbjct: 495 AVMWFTQKLQPAPGMDPMQQKMMQFMPLVFGVMMAFFPAGLVLYWVTNGALGLLQQWWMM 554 Query: 558 KMHG 561 K HG Sbjct: 555 KRHG 558 >gi|221135461|ref|ZP_03561764.1| 60 kDa inner membrane insertion protein [Glaciecola sp. HTCC2999] Length = 571 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 142/506 (28%), Positives = 249/506 (49%), Gaps = 52/506 (10%) Query: 65 LSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE 123 L S R VE+ +L +I+L G NL Y + SN +LL P N Y A+ Sbjct: 92 LGQSERFVEVTTDTLQVTIDLLGGDVVKANLIKYPITEGSNDA-YSLLRP-NAAALYVAQ 149 Query: 124 LDYVSTANNIELPNSNTVWN--LISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLF 180 + P+ ++ ++ + + + L + +N + +T ++ Sbjct: 150 SGLIGANGPDANPDGRPLYTSPIMQYTLNNDSLSVPLSWVGSNGMRITKTFVFTRGNHAV 209 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI-------AVLGDKSLVEQK 233 ++ T+TN S D I P ++ + TF + EG + A G + QK Sbjct: 210 ELQQTITNGSNDTIIVQPYAQLKQ--------TFTLPEGNMFMPTYRGAAYGTEQEQYQK 261 Query: 234 YS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 YS DIE S+ W+ + + Y+ S ++P ++ + + + +A +++ Sbjct: 262 YSFGDIEDESL-RIATPAGWIAMIEHYFLSAWVPPQDKTNTIYTRAIGTEYATI--GYTS 318 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 ++I+ G + L+ G K+ T+ Y K L + +D+G+ +FI++ +F L+ Sbjct: 319 EPVSIVSGAETRLDSLLYLGPKDQDTLKQYAKGL-----NLTVDYGFLWFISEWLFWLLQ 373 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 +V N+G+AI++ T+ VK + +PL KKQY S A M+ + PK+ +L+E+F Q + Sbjct: 374 MIQGVVVNWGVAIIIITIIVKGIMYPLTKKQYESMAKMRVLGPKMTQLKERFGDDR-QKM 432 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM++LYK +NP+ GC+P+LLQ+P+F A+Y V S+E+RHA F WI DL+ DP Sbjct: 433 SQAMMELYKKEKVNPMGGCFPLLLQMPIFLALYWVFLESVELRHADFVFWITDLSTKDPY 492 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFA 530 + PI+ +SM+ K+ P D+ Q I+ +MP++ Sbjct: 493 FVL-------------------PILTGISMWALQKLQPMTVTDEMQKKIMQFMPIMMTIF 533 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVI 556 FP+GL++YW SNVI++VQ +I Sbjct: 534 FMWFPSGLVLYWLISNVITLVQAKLI 559 >gi|255066611|ref|ZP_05318466.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sicca ATCC 29256] gi|255049195|gb|EET44659.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sicca ATCC 29256] Length = 548 Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 135/488 (27%), Positives = 227/488 (46%), Gaps = 43/488 (8%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV 141 I+ K + L Y + N P TL + S + Y A+ + + N L N Sbjct: 70 IDEKSGDLRQMTLLKYKANGDENKPF-TLFNDSK-EYTYVAQSELLDAQGNNILKGVNFT 127 Query: 142 WNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRG 200 + ++L N + ++ + + YL + +TN S S Sbjct: 128 AAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYLVNVRFDITNTSGKPANLSADY 187 Query: 201 RIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SW 251 RI+R + + + + G + + + +SD++ + S +E+ W Sbjct: 188 RIVRDRSEPEGQGYFTRSFVGPVVYTPEGKFQKVNFSDLDDDAKSGKNEAEYARKTQTGW 247 Query: 252 LGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR----YQAKFSANEITILPGKSITTT 305 LG+ + ++ S +I P S + D R Y S I G + Sbjct: 248 LGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDNLYSTSVSVPLAAIQNGAKSEAS 307 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 L+AG + I + +L + + D+G ++ A P+F L++ +N++GN+G AI+ Sbjct: 308 INLYAGPQTTSVIANIADNLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAII 362 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T+ VK + +PL Y S A M+ PK+ ++EK+ Q+AM+QLYK IN Sbjct: 363 VLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDR-MAQQQAMMQLYKDEKIN 421 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC P+LLQIPVF +Y + S+E+R AP+ GWI DL+ +D P+Y Sbjct: 422 PLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRSD-----------PYY-- 468 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 I P+IM+++MF Q ++PPP D QA ++ MP++F FPAGL++YW + Sbjct: 469 ------ILPVIMAVTMFAQTFLNPPPTDPMQAKMMKVMPLIFSAMFFFFPAGLVLYWVVN 522 Query: 546 NVISIVQQ 553 N+++I QQ Sbjct: 523 NLLTIAQQ 530 >gi|225848362|ref|YP_002728525.1| 60 kDa inner-membrane protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225643468|gb|ACN98518.1| 60 kDa inner-membrane protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 514 Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 108/313 (34%), Positives = 177/313 (56%), Gaps = 38/313 (12%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W G +KY+ +F P T+ + D A +L S F+++ Sbjct: 231 WAGEENKYFLQIFAPKNGTNTVNVIPVAKDTTA------------VLVNVSPDFEGFIYS 278 Query: 311 GAKEFP---TIHHYEKDLAIPRFEML--IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 GAK + I Y KDL ++ ID+G+F + KP+F+L+ +FY + N+G+AI+ Sbjct: 279 GAKLYSILGQITDYYKDLWKVDLDLRSSIDFGFFGILGKPLFLLLHFFYTYIPNWGVAII 338 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + TV +++LFFPL K + M ++ P+I++L++K+ + P Q LQ+ +++LY N Sbjct: 339 ILTVLIRILFFPLNHKSLKAMRKMADLAPEIEKLKKKYAKDP-QKLQEEIMKLYAEAGAN 397 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P++GC PIL+QIPVF A+Y V+ +++E+++APF WIKDL+ D P+Y Sbjct: 398 PMSGCLPILVQIPVFIALYNVLMVTVELKNAPFILWIKDLSDKD-----------PYY-- 444 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 I PI+M LSM Q ++ P +DK Q MI+ M VF F +FPAGL++YW + Sbjct: 445 ------ILPILMGLSMIAQQWIT-PSSDKNQKMIMYIMAGVFTFMFMNFPAGLVLYWLTN 497 Query: 546 NVISIVQQAVIMK 558 N++ ++Q ++ K Sbjct: 498 NILGLLQSFIVNK 510 >gi|319957040|ref|YP_004168303.1| membrane protein insertase, yidc/oxa1 family [Nitratifractor salsuginis DSM 16511] gi|319419444|gb|ADV46554.1| membrane protein insertase, YidC/Oxa1 family [Nitratifractor salsuginis DSM 16511] Length = 535 Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 98/234 (41%), Positives = 144/234 (61%), Gaps = 21/234 (8%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 PR I++GWF F+AKP F +M YN VGN+G AI+L T+ VKL+ FPL+ K +S Sbjct: 308 PRLTDAIEFGWFTFLAKPFFRIMLAIYNFVGNWGWAIVLFTLLVKLVLFPLSYKGLLSMQ 367 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K++ PK+ E++EK+K P ++ Q+ M+ LYK H NP+ GC P+LLQIPVFFA+Y+V+ Sbjct: 368 KLKDLAPKMKEIKEKYKSDPAKMNQQ-MMALYKKHGANPMGGCLPMLLQIPVFFALYRVL 426 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + E++ AP+ WI DL+ DP I PI+M ++MFIQ + Sbjct: 427 LNADELQGAPWILWIHDLSRQDPYFIL-------------------PILMGVTMFIQQHI 467 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +P D Q I W PV+ F +FPAGL++YW +N++SI QQ I +++ Sbjct: 468 TPNTMTDPMQQKIFKWFPVIMTFFFLTFPAGLVLYWLTNNILSIAQQYYINRVY 521 >gi|57167877|ref|ZP_00367017.1| 60 kDa inner-membrane protein [Campylobacter coli RM2228] gi|57020999|gb|EAL57663.1| 60 kDa inner-membrane protein [Campylobacter coli RM2228] Length = 531 Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 120/361 (33%), Positives = 193/361 (53%), Gaps = 44/361 (12%) Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGIS-DKYWASVF 263 ++P A +++ V V+ D+ + Y D + N N+W+ + D+Y+A+ F Sbjct: 206 YRPSIAVDSYTVHGAL--VMDDQETI-HTYEDGDMDKDENI--KNAWMTSAFDRYYAAFF 260 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 +F A+ P + N AG P H + Sbjct: 261 Y-----NFEKPLNVTISKDAQNN-----------PLVFAMSDNEFKAGGYMGPKEHVILR 304 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 + PR E ++++GWF FIAKPMF +++ +N +GN+G AI++ + ++++ FPL K Sbjct: 305 SID-PRLEAVVEYGWFTFIAKPMFEFLNFLHNHIGNWGWAIVIMVLIIRIILFPLTYKSM 363 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +S +K++ PK+ ELRE++K PQ + M++LYK H NP++GC PILLQIP+FFAI Sbjct: 364 ISMNKLKDLAPKMKELRERYK-GDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAI 422 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y+V+ ++E++ AP+ WI DL+ DP I PI+M ++MFI Sbjct: 423 YRVLLNAIELKAAPWAFWIHDLSVMDPYFIL-------------------PILMGVTMFI 463 Query: 504 QMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 Q ++P D QA I+ ++P++F F +FPAGL +YW +N+ S+VQQ VI KM Sbjct: 464 QQLITPMTIQDPMQAKIMKFLPIIFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKMFAK 523 Query: 563 E 563 E Sbjct: 524 E 524 >gi|284097721|ref|ZP_06385731.1| 60 kDa inner membrane insertion protein [Candidatus Poribacteria sp. WGA-A3] gi|283830767|gb|EFC34867.1| 60 kDa inner membrane insertion protein [Candidatus Poribacteria sp. WGA-A3] Length = 485 Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 131/422 (31%), Positives = 210/422 (49%), Gaps = 69/422 (16%) Query: 152 PTTPIKLVFKN-ANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209 PT + L ++N NNIL E+ + + YL + V D + G ++ Sbjct: 68 PTGHLTLSYRNDENNILVEKEFTFTHDSYLVDVAIRVAGLD-DAV-----GVLL------ 115 Query: 210 ATNTFGVQE---GFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNS--WLGISDKYWASVF 263 TN FG+ E G I LG +++ ++EK + S W + DKY+ SV Sbjct: 116 GTN-FGMVEWGQGLIGALGPAWMID---GELEKETPDPEIRRSGDIRWAALQDKYFISVM 171 Query: 264 IPSKETSF--HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 IP ++ Y+ + + + + L+AG K+F + Sbjct: 172 IPQGAQGVFAKAETDYVVTSGVEFPVEAEGSRLRFQ----------LYAGPKQFDLMRSL 221 Query: 322 EKDLAIPRFEMLIDWGWFYF--------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 L E ID+GWF + +AKP+F ++ + Y N+G+AI+L T +KL Sbjct: 222 GHSL-----EDTIDFGWFIYGSWSVVKAVAKPLFYVLRFLYEYTQNYGVAIILLTCGIKL 276 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 LF PL K Y S M+ IQPKI ++ KFK+ + L + +++LYK H +NP+ GC P+ Sbjct: 277 LFVPLQYKSYKSMQGMQKIQPKIQAVQAKFKEDRER-LNRELMKLYKEHKVNPVGGCLPM 335 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 +LQ+PVF +++ ++ +++++R+APF WI DL+ D PFY ++ Sbjct: 336 VLQMPVFISLFNILYMTVDLRNAPFALWITDLSIPD-----------PFY--------VF 376 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 PI+M SM +Q K+ P D QA ++ +PV F +FPAGL+IYW +NV++I QQ Sbjct: 377 PILMGASMVLQQKIMPTTMDPTQAKMMLLLPVFLTFLFLNFPAGLVIYWLTNNVLTIGQQ 436 Query: 554 AV 555 V Sbjct: 437 VV 438 >gi|153951835|ref|YP_001397950.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. doylei 269.97] gi|152939281|gb|ABS44022.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. doylei 269.97] Length = 530 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 119/361 (32%), Positives = 195/361 (54%), Gaps = 44/361 (12%) Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 ++P A +++ V G + V +++ K D+EK +N +V + Sbjct: 202 YRPNIAVDSYTVH-GALVVDNKETIETYKDGDVEKDESAN----------------NVVM 244 Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL-FAGAKEFPTIHHYEK 323 S +++ F Y D AN+ I+ S + G+KE + + Sbjct: 245 TSAFDRYYANFFYNFDKPLNVAISKDANKNPIVFAYSDNEFKAGGYIGSKEHVILRSID- 303 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 PR E ++++GWF FIAKPMF +++F+ +GN+G AI++ T+ V+++ FPL K Sbjct: 304 ----PRLEAVVEYGWFTFIAKPMFEFLNFFHQYIGNWGWAIVVMTLIVRIILFPLTYKSM 359 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +S +K++ PK+ ++RE++K PQ + M++LYK H NP++GC PILLQIP+FFAI Sbjct: 360 ISMNKLKDLAPKMKDIRERYK-GDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAI 418 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y+V+ ++E++ AP+ WI DL+ DP I PI+M +MF+ Sbjct: 419 YRVLLNAIELKAAPWAFWIHDLSVMDPYFIL-------------------PILMGATMFL 459 Query: 504 QMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 Q ++P D QA I+ ++PV+F F +FPAGL +YW +N+ S+VQQ VI K+ Sbjct: 460 QQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKIFAK 519 Query: 563 E 563 E Sbjct: 520 E 520 >gi|145628056|ref|ZP_01783857.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 22.1-21] gi|144979831|gb|EDJ89490.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 22.1-21] Length = 514 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 114/364 (31%), Positives = 193/364 (53%), Gaps = 34/364 (9%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 + N S I P G++ +++ N G D + + ++D++ +++S Sbjct: 182 IDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSDTNYKKYSFADMQDNNLS- 240 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA-KFSANEITILPGKSIT 303 W+ + Y+ S +IP+++ ++Q ++D + + +TI G T Sbjct: 241 IDTKAGWVAVLQHYFVSAWIPNQDV--NNQLYTITDSKNNVASIGYRGPVVTIPSGSQET 298 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G P + + +A ++ +D+GW +FIAKP+F L+++ +V N+G+A Sbjct: 299 ITSSLWTG----PKLQNQMATVA-NNLDLTVDYGWAWFIAKPLFWLLTFIQGIVSNWGLA 353 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK Sbjct: 354 IICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-RQRMSQEMMKLYKEEK 412 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D P+Y Sbjct: 413 VNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQD-----------PYY 461 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M +SMF+ KMSP P D Q ++N+ + F L SF G W Sbjct: 462 --------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFYAISF---LCSFSCGSHQAW 510 Query: 543 SWSN 546 ++ Sbjct: 511 YYTG 514 >gi|212704368|ref|ZP_03312496.1| hypothetical protein DESPIG_02423 [Desulfovibrio piger ATCC 29098] gi|212672206|gb|EEB32689.1| hypothetical protein DESPIG_02423 [Desulfovibrio piger ATCC 29098] Length = 423 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 105/313 (33%), Positives = 166/313 (53%), Gaps = 40/313 (12%) Query: 251 WLGISDKYWASVFIP--SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL 308 W G Y+ S +P + E + + + Y+ E+ + PG+ T Sbjct: 129 WAGPMSTYFLSAVMPGDADEARMVGRMQ-----GSVYRVALEPKEVVVAPGQETTLEVSY 183 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + G KE + LA+ +D G F IAK + L+ +F N+G++I++ T Sbjct: 184 WMGPKERKMLAAVSDQLALS-----VDLGMFSIIAKGLLWLLEFFQQYTHNWGLSIIMLT 238 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +K +F+PL K Y S MK +QP + +REK+K + + K ++ LYKT+ +NP + Sbjct: 239 IVIKAVFWPLTAKSYSSMEKMKKLQPMMANIREKYKDDK-EAMNKEVMALYKTYGVNPAS 297 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIKDLAAADPTNIFTLFGIL 480 GC PIL+Q+PVFF +Y+ + S+E+RHAPF W+ DL++ DP Sbjct: 298 GCVPILVQLPVFFGLYQALLTSIELRHAPFITYLPGTDLIWLADLSSKDP---------- 347 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 +Y I PIIM ++MF+Q KMSPP D Q I+ ++P+VF SFP+GL++ Sbjct: 348 -YY--------ITPIIMGITMFLQQKMSPPATDPTQQKIMMFLPIVFTALFLSFPSGLVV 398 Query: 541 YWSWSNVISIVQQ 553 YW +N++SI QQ Sbjct: 399 YWLVNNILSIAQQ 411 >gi|261363929|ref|ZP_05976812.1| membrane protein insertase, YidC/Oxa1 family [Neisseria mucosa ATCC 25996] gi|288567942|gb|EFC89502.1| membrane protein insertase, YidC/Oxa1 family [Neisseria mucosa ATCC 25996] Length = 547 Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 122/414 (29%), Positives = 204/414 (49%), Gaps = 41/414 (9%) Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 ++L N + ++ + + YL + +TN+S + S RI+R + + Sbjct: 141 VRLSAPETNGLKIDKVYTFTKDSYLVNVRFDITNSSGKPVNLSADYRIVRDHSEPEGQGY 200 Query: 215 GVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SWLGISDKYWASVFI- 264 G + + + +SD++ + S +E+ WLG+ + ++ S +I Sbjct: 201 FTHSYLGPVVYTPEDKFQKVSFSDLDDDAKSGKNEAEYARKTQTGWLGMIEHHFMSTWIL 260 Query: 265 -PSKETSFHSQFKYLSDGHAR----YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 P S + D R Y S I G + L+AG + I Sbjct: 261 QPKGGQSVCAAGDCRIDIKRRNDNLYSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIA 320 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 + +L + + D+G ++ A P+F L++ +N++GN+G AI++ T+ VK + +PL Sbjct: 321 NIADNLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLT 375 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 Y S A M+ PK+ ++EK+ Q+AM+QLYK INPL GC P+LLQIPV Sbjct: 376 NASYRSMAKMRAAAPKLQAIKEKYGDDR-MAQQQAMMQLYKDEKINPLGGCLPMLLQIPV 434 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F +Y + S+E+R AP+ GWI DL+ +D P+Y I P+IM++ Sbjct: 435 FIGLYWALFASVELRQAPWLGWITDLSRSD-----------PYY--------ILPVIMAV 475 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +MF Q ++PPP D QA ++ MP+VF FPAGL++YW +N+++I QQ Sbjct: 476 TMFAQTFLNPPPTDPMQAKMMKVMPLVFSAMFFFFPAGLVLYWVVNNLLTIAQQ 529 >gi|225077258|ref|ZP_03720457.1| hypothetical protein NEIFLAOT_02313 [Neisseria flavescens NRL30031/H210] gi|224951402|gb|EEG32611.1| hypothetical protein NEIFLAOT_02313 [Neisseria flavescens NRL30031/H210] Length = 548 Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 124/414 (29%), Positives = 203/414 (49%), Gaps = 41/414 (9%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 ++L N + ++ + + YL + +TN++ + S RI+R + + Sbjct: 142 VRLSAPETNGLKIDKVYTFTKGSYLVNVRFDITNSNGQPVNLSADYRIVRDHSEPEGQGY 201 Query: 215 GVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SWLGISDKYWASVFI- 264 + G + + + +SD++ + S E+ WLG+ + ++ S +I Sbjct: 202 FTRSYVGPVVYTPEGDFQKVSFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWIL 261 Query: 265 -PSKETSFHSQFKYLSDGHAR----YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 P S + + D R Y A S I G T L+AG + I Sbjct: 262 QPKGGQSVCAAGECSIDIKRRNDNLYSASVSVPLAAIPAGAKAETAINLYAGPQTTSVIA 321 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 + L + + D+G ++ A P+F L++ +N++GN+G AI++ T+ VK + +PL Sbjct: 322 NIADKLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLT 376 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 Y S A M+ PK+ ++EK+ Q+AM+QLYK INPL GC P+LLQIPV Sbjct: 377 NASYRSMAKMRAAAPKLQAIKEKYGDDR-MAQQQAMMQLYKDEKINPLGGCLPMLLQIPV 435 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F +Y + S+E+R AP+ GWI DL+ D PFY I P+IM+ Sbjct: 436 FIGLYWALFASVELRQAPWLGWITDLSRPD-----------PFY--------ILPLIMAA 476 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +MF Q ++PPP D QA ++ MP+VF FPAGL++YW +N+++I QQ Sbjct: 477 TMFAQTFLNPPPTDPMQAKMMKIMPLVFSVMFFFFPAGLVLYWVVNNLLTITQQ 530 >gi|313669125|ref|YP_004049409.1| integral membrane protein [Neisseria lactamica ST-640] gi|313006587|emb|CBN88052.1| putative integral membrane protein [Neisseria lactamica 020-06] Length = 545 Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 124/414 (29%), Positives = 200/414 (48%), Gaps = 41/414 (9%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 ++L N + ++ + + YL + +TN S RI+R + Q + Sbjct: 139 VRLSAPETNGLKIDKVYTFTKGSYLVNVRFDITNTGGKPANLSADYRIVRDRSQPEGQGY 198 Query: 215 GVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SWLGISDKYWASVFI- 264 + G + + + +SD++ + S E+ WLG+ + ++ S +I Sbjct: 199 FTRSYLGPVVYTPEGGFQKVGFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWIL 258 Query: 265 -PSKETSFHSQFKYLSDGHAR----YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 P S + + D R Y A I G T L+AG + I Sbjct: 259 QPKGGQSVCAAGECNIDIKRRNDKLYSASVGVPLAAIPAGAKAETAVNLYAGPQTTSVIA 318 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 L + + D+G ++ A P+F L++ +N++GN+G AI++ T+ VK + +PL Sbjct: 319 GIADKLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLT 373 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 Y S A M+ PK+ ++EK+ Q+AM+QLYK INPL GC P+LLQIPV Sbjct: 374 NASYRSMAKMRAAAPKLQAIKEKYGDDR-MAQQQAMMQLYKDEKINPLGGCLPMLLQIPV 432 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F +Y + S+E+R AP+ GWI DL+ +D P+Y I PIIM+ Sbjct: 433 FIGLYWALFASVELRQAPWLGWITDLSRSD-----------PYY--------ILPIIMAA 473 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +MF Q ++PPP D QA ++ MP+VF FPAGL++YW +N+++I QQ Sbjct: 474 TMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527 >gi|261400585|ref|ZP_05986710.1| membrane protein insertase, YidC/Oxa1 family [Neisseria lactamica ATCC 23970] gi|269209662|gb|EEZ76117.1| membrane protein insertase, YidC/Oxa1 family [Neisseria lactamica ATCC 23970] Length = 548 Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 152/568 (26%), Positives = 248/568 (43%), Gaps = 68/568 (11%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV-DNSYAAVLIDDRAQALS 66 F AIAL+++I W+ + P QT P Q V AL+ Sbjct: 9 FFAIALAIMI--GWEKMFPAP------------QTAPAPGQAAQQQRQTVATASAEAALA 54 Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 + + + ++ I+ K L L Y + P V L + Y A+ + Sbjct: 55 PATPITVTTDAVQAVIDEKSGDLRRLTLLKYKATGDEHKPFV--LFGDGKEYTYVAQSEL 112 Query: 127 VSTANN-----IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLF 180 + N I ++L K+ ++L N + ++ + + YL Sbjct: 113 LDAQGNNVLKGIGFTAPQKQYSLNGDKV-----EVRLSAPETNGLKIDKVYTFTKGSYLV 167 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIE 238 + + N S RI+R + Q + + G + + + +SD++ Sbjct: 168 NVRFDIANTGGKPANLSADYRIVRDRSQPEGQGYFTRSYLGPVVYTPEGGFQKVSFSDLD 227 Query: 239 KSSISNFHESN-------SWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR----Y 285 + S E+ WLG+ + ++ S +I P S + + D R Y Sbjct: 228 DDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCAAGECGIDIKRRNDKLY 287 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 A I G T L+AG + I L + + D+G ++ A P Sbjct: 288 SASVGVPLAAIPAGAKAETAVNLYAGPQTTSVIAGIADKLQLAK-----DYGKVHWFASP 342 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 343 LFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGD 402 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI DL Sbjct: 403 DR-MAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDL 461 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 + +D P+Y I PIIM+ +MF Q ++PPP D QA ++ MP+ Sbjct: 462 SRSD-----------PYY--------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPL 502 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQ 553 VF FPAGL++YW +N+++I QQ Sbjct: 503 VFSVMFFFFPAGLVLYWVVNNLLTIAQQ 530 >gi|148926121|ref|ZP_01809807.1| putative membrane protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845600|gb|EDK22692.1| putative membrane protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 530 Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 120/362 (33%), Positives = 194/362 (53%), Gaps = 46/362 (12%) Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHESNSWLGISDKYWASVF 263 ++P A +++ V V+ +K +E K D+EK +N +V Sbjct: 202 YRPNIAVDSYTVHGAL--VMDNKETIETYKDGDVEKDESAN----------------NVV 243 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL-FAGAKEFPTIHHYE 322 + S +++ F Y D AN+ I+ S + G+KE + + Sbjct: 244 MTSAFDRYYATFFYNFDKPLNVAISKDANQNPIVFAYSDNEFKAGGYIGSKEHVILRSID 303 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 PR E ++++GWF FIAKPMF +++ Y +GN+G AI++ T+ V+++ FPL K Sbjct: 304 -----PRLEAVVEYGWFTFIAKPMFEFLNFLYQYIGNWGWAIVVMTLIVRIILFPLTYKS 358 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 +S +K++ PK+ ++RE++K PQ + M++LYK H NP++GC PILLQIP+FFA Sbjct: 359 MISMNKLKDLAPKMKDIRERYK-GDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFA 417 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 IY+V+ ++E++ AP+ WI DL+ DP I PI+M +MF Sbjct: 418 IYRVLLNAIELKAAPWAFWIHDLSVMDPYFIL-------------------PILMGATMF 458 Query: 503 IQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +Q ++P D QA I+ ++PV+F F +FPAGL +YW +N+ S+VQQ VI K+ Sbjct: 459 LQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKIFA 518 Query: 562 AE 563 E Sbjct: 519 KE 520 >gi|311086918|gb|ADP66998.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 532 Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 128/417 (30%), Positives = 214/417 (51%), Gaps = 45/417 (10%) Query: 154 TPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKP 207 PIK + KN +++++ L Y +I V N S + + + G+I + K Sbjct: 141 VPIKWLSKNG--VIYKKIFILKPNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKR 198 Query: 208 QTATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP 265 + F +Q G D + K+ I + + + W+ + +Y+A +IP Sbjct: 199 NVYSRNFALQTFRGAAYSSDDNKYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIP 258 Query: 266 ---SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 K T + S S H + + I I P + L+ G P I E Sbjct: 259 DNLGKNTIYTS-----SLDHDTAVIGYKSPIINIPPNSRSIIKSKLWIG----PEIQK-E 308 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 L P ++ +D+GW +F+++P+F L++ Y+++GN+G +I+L T ++ L +PL K Q Sbjct: 309 MKLVAPNLDLTVDYGWLWFLSQPLFKLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQ 368 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y+S A M+ +QPKI E++EKF + ++ Q+ MI LYK INPL G PI +Q+P+F + Sbjct: 369 YISMAKMRALQPKIQEIKEKFSKDKQRISQE-MILLYKKEKINPLGGFLPIFIQMPIFLS 427 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y ++ S+E+RHAPF WI DL++ DP + P+IM L+MF Sbjct: 428 LYYMLIGSVELRHAPFLLWIHDLSSQDPYYVL-------------------PVIMGLTMF 468 Query: 503 IQMKMSPPP--ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 K+S +D Q I+N+MPV+F FP+GL++Y+ SN+++I+QQ I+ Sbjct: 469 FIQKISSTNHISDPLQKKIMNFMPVIFTAFFLWFPSGLVLYYIISNLVTIIQQKFIL 525 >gi|296273897|ref|YP_003656528.1| membrane protein insertase [Arcobacter nitrofigilis DSM 7299] gi|296098071|gb|ADG94021.1| membrane protein insertase, YidC/Oxa1 family [Arcobacter nitrofigilis DSM 7299] Length = 548 Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 110/311 (35%), Positives = 172/311 (55%), Gaps = 43/311 (13%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSAN-----EITILPGKSITTTNFL-----------F 309 SKET + K+L+ RY + N +++I+P K+ F+ + Sbjct: 247 SKETQTYKAVKFLA-FFDRYYTTVAYNFKKNFQVSIMPDKNNDPQGFIHSENSFIDFSGY 305 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 G KE T+ P+ +I++GWF FIA PMF+ + + + +GN+G I+ T+ Sbjct: 306 MGPKEHKTLKALN-----PQLTGVIEYGWFTFIANPMFLFLQFLQSYIGNWGWTIVFATI 360 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +KL+ FPL+ K +S +K++ PKI EL+EK+K Q M++LYK H NP+ G Sbjct: 361 IIKLILFPLSYKGMMSMQKLKDLAPKIKELQEKYK-GDKQKQSAHMMELYKKHGANPMGG 419 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P+++QIPVFFA+Y+VI ++E++ +P+ WI DLA D P+Y Sbjct: 420 CLPLIMQIPVFFALYRVILNAIELKGSPWILWIHDLALMD-----------PYY------ 462 Query: 490 VGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 + PI+M +SMF+Q +++P D+ Q I ++PVVF F FPAGL +YW +N+ Sbjct: 463 --VLPILMGISMFLQQRITPNTMQDETQKKIFQFLPVVFTFFFLWFPAGLTLYWFINNLF 520 Query: 549 SIVQQAVIMKM 559 +I QQ I KM Sbjct: 521 TISQQLFINKM 531 >gi|78486534|ref|YP_392459.1| 60 kDa inner membrane insertion protein [Thiomicrospira crunogena XCL-2] gi|78364820|gb|ABB42785.1| protein translocase subunit yidC [Thiomicrospira crunogena XCL-2] Length = 551 Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 112/329 (34%), Positives = 177/329 (53%), Gaps = 28/329 (8%) Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + D+ K I + W + Y+ S IP +E+ K L+DG Y A Sbjct: 242 KHSFDDLSKQPIQGIQTTGGWAAMIQHYFMSAVIPDQESQNRYYAKPLNDG--EYVAGVV 299 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 T+ G+S T ++ L+ G P I + +A P E+ +D+G IA+P+F ++ Sbjct: 300 EPMETVAAGQSQTLSSELYIG----PIIQDNLEKIA-PGLELTVDYGVLTIIAEPIFWVL 354 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + LVGN+G +I+L TV +KLLF+ L++ Y S A +K QPK+ +L+E + + Sbjct: 355 EKIHALVGNWGWSIILLTVLIKLLFYKLSETSYRSMARLKKFQPKLKQLKENYGDDKV-I 413 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 Q+ M++LYK INPL GC PIL+Q+PVF A+Y V+ S EMR AP+ WI DL+ DP Sbjct: 414 FQQKMMKLYKEEKINPLGGCLPILVQMPVFIALYWVLLYSAEMRQAPWILWIDDLSVKDP 473 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I P++M +SM++Q K++P D+ Q ++ +P +F Sbjct: 474 YFIL-------------------PVLMGISMWVQQKLNPSAMMDEMQQKVMKALPFIFTI 514 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N++S+ QQ I + Sbjct: 515 FFMFFPAGLVLYWVVNNILSVSQQWYITR 543 >gi|325983266|ref|YP_004295668.1| membrane protein insertase, YidC/Oxa1 family domain containing [Nitrosomonas sp. AL212] gi|325532785|gb|ADZ27506.1| membrane protein insertase, YidC/Oxa1 family domain containing [Nitrosomonas sp. AL212] Length = 642 Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 144/503 (28%), Positives = 249/503 (49%), Gaps = 47/503 (9%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF--AELDYV 127 ++++K +I I+ G L L + N P LL K A F A+ + Sbjct: 88 KIQVKTDMVIAEIDTAGGDIRQLGLIEHPSREDINKPYELLLD----KTARFQVAQSGLI 143 Query: 128 STANNIELPNSNTVWNLISGKILTPTTP------IKLVFKNANNILFERTISLDE-HYLF 180 LPN T + + K P ++LV A+ I + + Y+ Sbjct: 144 GDG----LPNHKTKYTVEDNKYSYQLEPGQEKVVVRLVAPEADGIQVTKIYTFHRGSYVI 199 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 + + N+S I +++R ++P A G D+ ++ K+SD++ Sbjct: 200 DVEFEIANHSEAAIIPFSYFQMLRDPNEPVGAGALVHSYTGAAMYTDDEKFLKIKFSDLD 259 Query: 239 KSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 K+ + N W+ + + Y+ + ++P + K L+ +Y A A T+ Sbjct: 260 KNKAEYPTNADNGWIAMLEHYFLTAWLPEPGSPREYFAKRLAPN--QYTAGVIAPVGTVE 317 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 P + + +AG +E + +LA P E+ +D+GW +AKP+F L+S++++ Sbjct: 318 PDRVKNISMPFYAGPQE----QNKLAELA-PGLELTVDYGWLTVLAKPLFWLLSFYHSWT 372 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+GIAI+L T+ VKL+FFPL+ Y S A ++ + PK+ +RE++ S Q + +AM++ Sbjct: 373 DNWGIAIILLTLTVKLIFFPLSAAGYRSMAKLRVVTPKLQRIREQYA-SDRQRMHQAMME 431 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 YK INP+ GC PIL+QIPVF A++ + ++E+R+AP WI D++ D Sbjct: 432 FYKEEKINPMGGCLPILVQIPVFIALFWTLLAAVELRYAPLALWITDMSVPD-------- 483 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 P+Y + P+IM +SM++Q K+SP PAD QA ++ MP+ F FP+G Sbjct: 484 ---PYY--------VLPVIMGVSMWVQSKLSPTPADPIQAKVMQIMPIAFSIFFFFFPSG 532 Query: 538 LIIYWSWSNVISIVQQAVIMKMH 560 L++Y +N++SI QQ I +M+ Sbjct: 533 LVLYSLCNNILSIAQQWQITRMY 555 >gi|328952575|ref|YP_004369909.1| Membrane protein oxaA [Desulfobacca acetoxidans DSM 11109] gi|328452899|gb|AEB08728.1| Membrane protein oxaA [Desulfobacca acetoxidans DSM 11109] Length = 566 Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 98/275 (35%), Positives = 158/275 (57%), Gaps = 33/275 (12%) Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 A F ++ PG+ I+ L+ G K+ + K L + E +D+GWF +A P+ Sbjct: 309 ATFRTQVASLPPGQEISLPYTLYFGPKDLDIL----KSLGL-GLEQTVDFGWFQILALPL 363 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 ++ +F+ + N+G AI++ T +++LF K Y S +M+ +QPKI +LREK+K Sbjct: 364 LYVLQFFFKYLHNYGWAIIVMTFLIRVLFLYPNHKSYQSMKDMQKLQPKIAKLREKYKDD 423 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG------ 460 + L K ++ LY+T+ +NP+ GC P++LQ+PVF A+Y ++ ++E+RHAPF Sbjct: 424 R-EALNKELMGLYRTYKVNPMGGCLPMILQLPVFIALYNILGYAIELRHAPFISTLPFTD 482 Query: 461 --WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 W+ DL+A DP + I PIIM +MFIQ KM+P P D QA Sbjct: 483 IVWLADLSAKDP-------------------LLITPIIMGATMFIQQKMTPSPGDPTQAK 523 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++ MP++F F +F +GL++YW +NV+SI+QQ Sbjct: 524 LMLMMPIIFTFMFLNFASGLVLYWLLNNVLSIIQQ 558 >gi|254804276|ref|YP_003082497.1| inner membrane protein OxaA [Neisseria meningitidis alpha14] gi|254667818|emb|CBA03804.1| inner membrane protein OxaA [Neisseria meningitidis alpha14] Length = 545 Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 122/391 (31%), Positives = 192/391 (49%), Gaps = 40/391 (10%) Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYS 235 YL + + N S S RI+R + + G + + + + +S Sbjct: 162 YLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFS 221 Query: 236 DIEKSSISNFHESN-------SWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR-- 284 D++ + S E+ WLG+ + ++ S +I P S + + D R Sbjct: 222 DLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGECSIDIKRRND 281 Query: 285 --YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y A S I G T L+AG + I + +L + + D+G ++ Sbjct: 282 KLYSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADNLQLAK-----DYGKVHWF 336 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK Sbjct: 337 ASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEK 396 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 397 YGDDR-MAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWI 455 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ AD P+Y I PIIM+ +MF Q ++PPP D QA ++ Sbjct: 456 TDLSRAD-----------PYY--------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKI 496 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MP+VF FPAGL++YW +N+++I QQ Sbjct: 497 MPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527 >gi|91228357|ref|ZP_01262285.1| putative inner membrane protein translocase component YidC [Vibrio alginolyticus 12G01] gi|91188117|gb|EAS74421.1| putative inner membrane protein translocase component YidC [Vibrio alginolyticus 12G01] Length = 227 Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 94/232 (40%), Positives = 145/232 (62%), Gaps = 21/232 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P ++++D+GW +FIAKP+ ML+S+ + VGN+G+AI+ T V+ +PL K QY S A Sbjct: 6 PNLDLVVDYGWLWFIAKPLHMLLSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMA 65 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ +QPK+ +RE+ Q + + M++LYK +NPL GC P++LQ+P+F A+Y + Sbjct: 66 KMRMLQPKLQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL 124 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+E+RH+PF+GWI DL+A DP I P++M SMF+ KM Sbjct: 125 MESVELRHSPFFGWIHDLSAQDPYYIL-------------------PLLMGASMFLIQKM 165 Query: 508 SPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 SP D Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 166 SPTTVTDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYK 217 >gi|121596421|ref|YP_988317.1| protein translocase subunit yidC [Acidovorax sp. JS42] gi|120608501|gb|ABM44241.1| protein translocase subunit yidC [Acidovorax sp. JS42] Length = 570 Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 118/343 (34%), Positives = 187/343 (54%), Gaps = 55/343 (16%) Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR--YQA 287 +E ++I+KSS S+ ++ + Y+A+ ++ L DG R + Sbjct: 261 IENGKAEIDKSS------SDGYVAMVQHYFATAWL-------------LGDGVQRDNFVR 301 Query: 288 K-----FSANEIT----ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 K +S IT I PG+S LFAG P I + LA P E++ D+GW Sbjct: 302 KVDTNLYSVGMITPLGEIAPGQSKAVDARLFAG----PQIETLLEKLA-PGLELVKDYGW 356 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +AKP++ L+ + ++ N+G +I+ +K+ F+ L K Y S A MK I P+I E Sbjct: 357 LTILAKPLYWLLDQLHKVIANWGWSIVALVFLLKIAFYWLNAKAYASMAKMKAINPRIME 416 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +RE+ K P Q +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+EMR+AP+ Sbjct: 417 MRERLKDKP-QQMQQEMMRIYREEKVNPMGGCLPIMIQIPVFIALYWVLLSSVEMRNAPW 475 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 GWIKDL++ D PF+ I P++M+LS +Q ++P P D QA Sbjct: 476 IGWIKDLSSPD-----------PFF--------ILPLLMTLSSLLQTALNPAPPDPMQAK 516 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ MP++F FPAGL++YW +N++SI QQ +I G Sbjct: 517 MMWLMPLMFSVMFFFFPAGLVLYWLTNNILSIAQQWIINTRMG 559 >gi|223039678|ref|ZP_03609964.1| inner membrane protein OxaA [Campylobacter rectus RM3267] gi|222879061|gb|EEF14156.1| inner membrane protein OxaA [Campylobacter rectus RM3267] Length = 520 Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 95/252 (37%), Positives = 154/252 (61%), Gaps = 26/252 (10%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + GAK+ T+ ++L +I++GWF FIAKPMF ++ Y +GN+G AI++ T Sbjct: 283 YIGAKDHATLSQINEELV-----DVIEYGWFTFIAKPMFAFLNLLYGYIGNWGWAIVVLT 337 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + ++++ FPL K +S +K++ PK+ EL+ K+K PQ L M++LYK + NP+ Sbjct: 338 LVIRIVLFPLTYKGMLSMNKLKDLAPKVKELQAKYK-GDPQKLNMHMMELYKKNGANPMG 396 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC PIL+QIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Y Sbjct: 397 GCLPILMQIPIFFAIYRVLLNAIELKAAPWILWIHDLSVMDP------------YF---- 440 Query: 489 HVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + PI+M +MF+Q K++P +D Q I+ ++P++F F +FPAGL +YW +NV Sbjct: 441 ---VLPILMGATMFLQQKLTPTTFSDPMQEKIMKFLPLIFTFFFVTFPAGLTLYWFVNNV 497 Query: 548 ISIVQQAVIMKM 559 S++QQ + K+ Sbjct: 498 CSVIQQIFVNKL 509 >gi|124516563|gb|EAY58071.1| putative inner-membrane protein [Leptospirillum rubarum] Length = 511 Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 108/329 (32%), Positives = 175/329 (53%), Gaps = 46/329 (13%) Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 K+ +++K F W+G DKY+ +I S F + K +G + + S N Sbjct: 208 KFQEVKKDGSLFFDSGLKWVGNEDKYFIG-YIASSTPGFSVEIK--KNGSSSWFQLLSKN 264 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF--------IAK 344 I ++ K + + + L ID+GWF F +AK Sbjct: 265 SIDFK----------IYGEPKRYKLLKEQDSGLIDT-----IDFGWFMFGRILLISFLAK 309 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F+LMSY +V N+G+AI+L T+ +K++F PLA Y S M+++QP+I +L+ KFK Sbjct: 310 PIFLLMSYLVGIVHNYGVAIILVTILIKIIFSPLAYMSYKSIYEMQSLQPEIKKLQTKFK 369 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 L +A+++LYK +NPL GC P+L+QIPVF A+Y +++ ++E+R APF WI D Sbjct: 370 DD-KAALNQALMELYKERRVNPLGGCLPMLVQIPVFVALYNILNNTVELRQAPFILWIHD 428 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP + PI+M ++M +Q K++P D Q ++ ++P Sbjct: 429 LSLKDPYYVL-------------------PIVMGITMILQYKLNPSSPDPVQQKVMMFVP 469 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 V+ F +FPAGL++YW +NV++I QQ Sbjct: 470 VIMTFFFLNFPAGLVLYWLVNNVLTIGQQ 498 >gi|93007297|ref|YP_581734.1| putative inner membrane protein translocase component YidC [Psychrobacter cryohalolentis K5] gi|92394975|gb|ABE76250.1| protein translocase subunit yidC [Psychrobacter cryohalolentis K5] Length = 564 Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 106/326 (32%), Positives = 182/326 (55%), Gaps = 33/326 (10%) Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 K++D E ++ S+ W+GI Y+ S + P +F +F G Y F++ Sbjct: 257 KFNDGELTTTSD----KGWVGIVQHYFVSAWTPE---NFTGKFFSRETGD-DYFIGFNSQ 308 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + + P K +T L+AG P + KD+A+ +D+G + I+K +F ++ Sbjct: 309 PVNVAPNKQVTLNATLYAG----PKVQSELKDVAV-GLNQTVDYGLLWPISKILFGILDG 363 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + ++GN+G +I+L T+ VKL + K Y S A M+ I P++ L+E+ ++ Q Sbjct: 364 IHKVIGNWGWSIILLTILVKLALMWFSNKSYYSMAKMRAIAPRLAALKEEHGDDRMKMSQ 423 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+ +YK +NP+AGC PIL+Q+P+F A+Y V+ S+E+RHAP+ WI+DL+A DP Sbjct: 424 E-MMAMYKEEKVNPMAGCLPILMQMPIFLALYWVLVESVELRHAPWILWIQDLSAMDPWF 482 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I P++M SMFIQ +++P PAD QA ++ ++P++F + Sbjct: 483 IL-------------------PLLMGASMFIQQQLNPQPADPMQAKVMKFLPIIFTAFML 523 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW+ +N+ S+ Q ++ K Sbjct: 524 FFPAGLVLYWTVNNLFSMTHQYIVNK 549 >gi|218670937|ref|ZP_03520608.1| putative inner membrane protein translocase component YidC [Rhizobium etli GR56] Length = 139 Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 79/134 (58%), Positives = 106/134 (79%) Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 YKVI I++EMRHAPF+GWI+DL+A DPT I LFG+LPF P +H+G+WP+IM ++MF+ Sbjct: 1 YKVIYITIEMRHAPFFGWIQDLSAPDPTTIVNLFGLLPFEAPALLHLGVWPLIMGVTMFV 60 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 QM+M+P P D QAMI NWMP+VF F L+SFPAGL+IYW+W+N +S++QQ+VIM+ HG Sbjct: 61 QMRMNPTPPDPTQAMIFNWMPLVFTFMLASFPAGLVIYWAWNNTLSVLQQSVIMRRHGVR 120 Query: 564 IGLIDRLRSTFSKN 577 I L D L+ F + Sbjct: 121 IELFDNLKGLFRRK 134 >gi|157415220|ref|YP_001482476.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. jejuni 81116] gi|157386184|gb|ABV52499.1| 60 kDa inner-membrane protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747862|gb|ADN91132.1| Inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni M1] gi|315932545|gb|EFV11478.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp. jejuni 327] Length = 530 Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 119/362 (32%), Positives = 195/362 (53%), Gaps = 46/362 (12%) Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHESNSWLGISDKYWASVF 263 ++P A +++ V V+ +K +E K D+EK +N +V Sbjct: 202 YRPNIAVDSYTVHGAL--VMDNKETIETYKDGDVEKDESAN----------------NVV 243 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL-FAGAKEFPTIHHYE 322 + S +++ F Y D AN+ I+ S + G+KE + + Sbjct: 244 MTSAFDRYYATFFYNFDKPLNVAISKDANKNPIVFAYSDNEFKAGGYIGSKEHVILRSID 303 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 PR E ++++GWF FIAKPMF +++ + +GN+G AI++ T+ V+++ FPL K Sbjct: 304 -----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNWGWAIVVMTLIVRIILFPLTYKS 358 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 +S +K++ PK+ ++RE++K PQ + M++LYK H NP++GC PILLQIP+FFA Sbjct: 359 MISMNKLKDLAPKMKDIRERYK-GDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFA 417 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 IY+V+ ++E++ AP+ WI DL+ DP I PI+M ++MF Sbjct: 418 IYRVLLNAIELKAAPWAFWIHDLSVMDPYFIL-------------------PILMGVTMF 458 Query: 503 IQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +Q ++P D QA I+ ++PV+F F +FPAGL +YW +N+ S+VQQ VI K+ Sbjct: 459 LQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKIFA 518 Query: 562 AE 563 E Sbjct: 519 KE 520 >gi|86150679|ref|ZP_01068900.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596386|ref|ZP_01099623.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 84-25] gi|218562577|ref|YP_002344356.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|38503224|sp|Q9PNX7|OXAA_CAMJE RecName: Full=Inner membrane protein oxaA gi|85838860|gb|EAQ56128.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191227|gb|EAQ95199.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 84-25] gi|112360283|emb|CAL35078.1| putative membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926191|gb|ADC28543.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. jejuni IA3902] gi|315928512|gb|EFV07816.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp. jejuni 305] Length = 528 Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 122/362 (33%), Positives = 195/362 (53%), Gaps = 46/362 (12%) Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHESNSWLGISDKYWASVF 263 ++P A +++ V V+ +K +E K D+EK +N S D+Y+A+ F Sbjct: 202 YRPNIAVDSYTVHGAL--VMDNKETIETYKDGDVEKDESANNVVMTSAF---DRYYATFF 256 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT-TNFLFAGAKEFPTIHHYE 322 Y D AN+ I+ S + G+KE + + Sbjct: 257 -------------YNFDKPLNVAISKDANQNPIVFAYSDNEFKAGGYIGSKEHVILRSID 303 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 PR E ++++GWF FIAKPMF +++ + +GN+G AI++ T+ V+++ FPL K Sbjct: 304 -----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNWGWAIVVMTLIVRIILFPLTYKS 358 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 +S +K++ PK+ ++RE++K PQ + M++LYK H NP++GC PILLQIP+FFA Sbjct: 359 MISMNKLKDLAPKMKDIRERYK-GDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFA 417 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 IY+V+ ++E++ AP+ WI DL+ DP Y I PI+M +MF Sbjct: 418 IYRVLLNAIELKAAPWAFWIHDLSVMDP------------YF-------ILPILMGATMF 458 Query: 503 IQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +Q ++P D QA I+ ++PV+F F +FPAGL +YW +N+ S+VQQ VI K+ Sbjct: 459 LQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKIFA 518 Query: 562 AE 563 E Sbjct: 519 KE 520 >gi|257095987|ref|YP_003169628.1| 60 kDa inner membrane insertion protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048511|gb|ACV37699.1| 60 kDa inner membrane insertion protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 560 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 147/532 (27%), Positives = 236/532 (44%), Gaps = 72/532 (13%) Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 AAV D+A+ + +K + I+ G L L Y D ++ L Sbjct: 62 AAVRAPDKAETFT------VKTDLFVAHISRIGGDIVRLELNDYK-DSTNKQKDFALF-- 112 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----------ILTPTTPIKLVFKNA 163 K+ Y A+ + LPN T ++ ++G +L P K A Sbjct: 113 -EAKHQYVAQSGLIGEG----LPNHKTSFSAVAGSAELGADAKTVVLRLEAPAGGGLKVA 167 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFI 221 F R YL + + N S ++ ++ R P ++ G Sbjct: 168 KTYTFTRG-----SYLIDVAHEIDNGSDKEVLAHAYYQLQRDTKAPDGESSMVSTYTGPA 222 Query: 222 AVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + ++DIEK + W+ + Y+ + +IP+ T +F Y+ Sbjct: 223 VYTNQDKYQKVDFADIEKGKAKFATRADDGWIAMVQHYFVAAWIPA--TGLPREF-YMRK 279 Query: 281 GHARYQAKFSANEIT----ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE----- 331 + I PG +T + ++AG P I + LA P + Sbjct: 280 LEGGVNPAVAVGVIVPAPVAAPGAKVTFSVPVYAG----PQIQATLEQLAKPEADGGIGA 335 Query: 332 ----MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 +++D+GW +A P+F + + +VGN+G AI+L T+ +KLLFFPL+ Y S A Sbjct: 336 QGLPLVVDYGWLTIVAAPIFWCLEAIHTVVGNWGWAIVLLTIGIKLLFFPLSAASYKSMA 395 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ + P++ L+E++ Q L + M+ LYK INPL GC PI +QIPVF A+Y + Sbjct: 396 KMRTVTPRLMALKERYGDD-RQKLNQEMMALYKREKINPLGGCLPIAVQIPVFIALYWAL 454 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E+R AP+ WI DL+A D P+Y + P+IM ++M IQ K+ Sbjct: 455 LGAVEIRDAPWILWITDLSAQD-----------PYY--------VLPVIMVVTMLIQTKL 495 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P P D QA ++ MP +F FPAGL++YW +NV+SI QQ I +M Sbjct: 496 NPTPPDPIQAKVMMMMPFIFGAMFFFFPAGLVLYWVVNNVLSIAQQWQITRM 547 >gi|171061052|ref|YP_001793401.1| 60 kDa inner membrane insertion protein [Leptothrix cholodnii SP-6] gi|170778497|gb|ACB36636.1| 60 kDa inner membrane insertion protein [Leptothrix cholodnii SP-6] Length = 559 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 135/494 (27%), Positives = 233/494 (47%), Gaps = 41/494 (8%) Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 + + +G + L Y D SS S V L S ++ Y AE + T LP+ Sbjct: 92 ATFDSRGGTLVSIELLKYA-DPSSASGHVMLFDQSPQRH-YMAESGLIGTGQPGTLPDHT 149 Query: 140 TVWNLISGK--ILTPTTPIKLVFKN--ANNILFERTISLDE-HYLFKIVDTVTNNSIDQI 194 T+ N+++G + + ++ F++ A+ + +T +L Y+ + V N + Sbjct: 150 TLMNVVAGDRTLGDGKSELQARFESTAADGVKLVKTYTLRRGDYVIDVQHEVLNQGAAAV 209 Query: 195 RFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISN-----FHE 247 +++R P ++F AV + ++ ++SDIEK + Sbjct: 210 SPQLYLQLVRDGNPLPDASSFYSTFTGPAVYSEAGKFQKIEFSDIEKRKAGDKVDHVTSA 269 Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 + W+ + Y+A+ ++P + + +SD E+ P S Sbjct: 270 EDGWVAMVQHYFAAAWLPGDKVQREFFSRKVSDNLYAVGMLLPVGEVA--PAASRKIDAR 327 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 LF G +E I + P +++ D+GW ++KP+F L+ ++ +GN+G AI+ Sbjct: 328 LFVGPQEEKRI-----EALAPGLDLVKDYGWLTILSKPLFWLLHKLHSYIGNWGWAIVAL 382 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 V +K F+ L Y S MK I PK+ ELRE+ K P Q +Q+ M+++Y+ +NPL Sbjct: 383 VVLLKAAFYWLNASAYRSMGKMKAINPKVQELRERLKDKPQQ-MQQEMMRIYREEKVNPL 441 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC PI +Q+P F A+Y V+ S+EMR AP+ GW+ DL+ DP I Sbjct: 442 GGCLPIFVQMPFFIALYWVLLSSVEMRGAPWVGWVHDLSVKDPYFIL------------- 488 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 P++M+ + +Q ++P P D QA ++ MP+ F FPAGL++YW +N+ Sbjct: 489 ------PLLMTATTVLQTWLNPTPPDPIQAKMMWIMPLAFSVMFFFFPAGLVLYWFTNNL 542 Query: 548 ISIVQQAVIMKMHG 561 +SI QQ +I + G Sbjct: 543 LSIAQQWMINRQLG 556 >gi|315637646|ref|ZP_07892852.1| inner membrane protein [Arcobacter butzleri JV22] gi|315478100|gb|EFU68827.1| inner membrane protein [Arcobacter butzleri JV22] Length = 533 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 151/498 (30%), Positives = 241/498 (48%), Gaps = 82/498 (16%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHL-DVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 +E+ N + + L ++ D N L +V+ P+ + N F +++ V + Sbjct: 98 IEIDNLGRVAQVTLTEEKYKDENGAQIKLFEVNQLKPLEVRFADININEEAF-KVNVVPS 156 Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNN 189 ++NI+ + L+ + LT T K + TI D HY D ++ Sbjct: 157 SSNIDATQNKQ--ELVLTQTLTNTVLTK-----------KFTIYPDGHY-----DLTVSS 198 Query: 190 SIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL--VEQKYSDIEKSSISNFHE 247 + D+ F G +P + + V GFI L D SL +E S ++ + + Sbjct: 199 TNDKPFFVSNG----FRPNVLVDMYAVH-GFITKLNDNSLTTIEDGSSKKNETFVGSKFV 253 Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 SN D+Y+A+V I + E S ++T++P S +F Sbjct: 254 SNF-----DRYYATV-IYNFEKSL---------------------QVTVMPDSSNNPQSF 286 Query: 308 LFA-GAKEF-----PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 + + G F P H + L P +ID+GWF FIAKPMF+L+ + +GN+G Sbjct: 287 IHSSGNISFSGYMGPKNHRVLESLN-PELIDVIDYGWFTFIAKPMFVLLQFLQGYIGNWG 345 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 I+ T+ VKL+ +PL+ K VS +K++ PK+ E++ K+K Q M++LYK Sbjct: 346 WTIVALTILVKLVLYPLSYKGMVSMQKLKDLAPKMKEIQLKYKDD-KQKQSMHMMELYKK 404 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 H NP+ GC P+LLQIP+FFAIY+V+ ++E++ A + WI DLAA D P Sbjct: 405 HGANPMGGCLPLLLQIPIFFAIYRVLINAIELKGAEWIFWIHDLAAMD-----------P 453 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLII 540 F+ + PI+M +M+IQ K++P D+ Q I +P+VF F FPAGL + Sbjct: 454 FF--------VLPILMGATMYIQQKITPTTVQDELQKKIFQLLPIVFTFFFLWFPAGLTL 505 Query: 541 YWSWSNVISIVQQAVIMK 558 YW +N+ +I QQ VI K Sbjct: 506 YWFVNNLFTIGQQYVINK 523 >gi|261380787|ref|ZP_05985360.1| membrane protein insertase, YidC/Oxa1 family [Neisseria subflava NJ9703] gi|284796252|gb|EFC51599.1| membrane protein insertase, YidC/Oxa1 family [Neisseria subflava NJ9703] Length = 548 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 124/414 (29%), Positives = 201/414 (48%), Gaps = 41/414 (9%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 ++L N + ++ + + YL + +TN+ + S RI+R + + Sbjct: 142 VRLSAPETNGLKIDKVYTFTKGSYLVNVRFDITNSKGQPVNLSADYRIVRDHSEPEGQGY 201 Query: 215 GVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SWLGISDKYWASVFI- 264 + G + + + +SD++ + S E+ WLG+ + ++ S +I Sbjct: 202 FTRSYVGPVVYTPEGGFQKVSFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWIL 261 Query: 265 -PSKETSFHSQFKYLSDGHAR----YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 P S S + D R Y A S I G T L+AG + I Sbjct: 262 QPKDGQSVCSAGECNIDIKRRNDNLYSASVSVPLAAIQAGAKAETAINLYAGPQTTSVIA 321 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 + L + + D+G ++ A P+F L++ +N++GN+G AI++ T+ VK + +PL Sbjct: 322 NIADKLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLT 376 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 Y S A M+ PK+ ++EK+ Q+AM+QLYK INPL GC P+LLQIPV Sbjct: 377 NASYRSMAKMRAAAPKLQAIKEKYGDDR-MAQQQAMMQLYKDEKINPLGGCLPMLLQIPV 435 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F +Y + S+E+R AP+ GWI DL+ DP F ILPF IM+ Sbjct: 436 FIGLYWALFASVELRQAPWLGWITDLSRPDP------FYILPF-------------IMAA 476 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +MF Q ++PP D QA ++ MP++F FPAGL++YW +N+++I QQ Sbjct: 477 TMFAQTYLNPPSTDPMQAKMMKVMPLIFSIMFFFFPAGLVLYWVVNNLLTIAQQ 530 >gi|332525676|ref|ZP_08401825.1| yidc translocase/secretase [Rubrivivax benzoatilyticus JA2] gi|332109235|gb|EGJ10158.1| yidc translocase/secretase [Rubrivivax benzoatilyticus JA2] Length = 552 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 113/329 (34%), Positives = 173/329 (52%), Gaps = 28/329 (8%) Query: 234 YSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + DI K+ + +N W+ + Y+AS +I + E +F+ G Y Sbjct: 249 FKDIAKNDAGHDKTANDGWIAMVQHYFASAWIVNAEG--QREFRTAKIGDNLYTIAMVLP 306 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + PG S + LF G P + LA P E L D+GW ++KP+F L+ Sbjct: 307 MGEVAPGASKALESQLFVG----PQLETSLAALA-PGLEYLKDYGWLMPLSKPLFWLLDK 361 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + +GN+G AI+ V +K+ F+ L Y S A M+ I P++ E+RE++K P Q +Q Sbjct: 362 LNSAIGNWGWAIVALVVLLKIAFYWLNASAYKSMAKMRAINPRVMEMRERYKDKPQQ-MQ 420 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+++Y+ +NPL GC PIL+Q+P F A+Y V+ S+EMR+AP+ GWI DL+A DP Sbjct: 421 QEMMRIYREEKVNPLGGCLPILIQMPFFIALYWVLLSSVEMRNAPWIGWITDLSAKDPWF 480 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I PI+M+ S +Q+ + P D QA ++ +MP+ F Sbjct: 481 IL-------------------PILMTASSLVQVALGAKPPDPMQARLMWFMPLAFGVMFF 521 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++YW +NV+SI QQ I K G Sbjct: 522 FFPAGLVLYWLTNNVLSIAQQWYINKKLG 550 >gi|57237786|ref|YP_179034.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni RM1221] gi|57166590|gb|AAW35369.1| inner membrane protein, 60 kDa [Campylobacter jejuni RM1221] gi|315058399|gb|ADT72728.1| OxaI/YidC membrane insertion protein [Campylobacter jejuni subsp. jejuni S3] Length = 530 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 119/362 (32%), Positives = 194/362 (53%), Gaps = 46/362 (12%) Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHESNSWLGISDKYWASVF 263 ++P A +++ V V+ +K +E K D+EK +N +V Sbjct: 202 YRPNIAVDSYTVHGAL--VMDNKETIETYKDGDVEKDESAN----------------NVV 243 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL-FAGAKEFPTIHHYE 322 + S +++ F Y D AN+ I+ S + G+KE + + Sbjct: 244 MTSAFDRYYATFFYNFDKPLNVAISKDANQNPIVFAYSDNEFKAGGYIGSKEHVILRSID 303 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 PR E ++++GWF FIAKPMF +++ + +GN+G AI++ T+ V+++ FPL K Sbjct: 304 -----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNWGWAIVVMTLIVRIILFPLTYKS 358 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 +S +K++ PK+ ++RE++K PQ + M++LYK H NP++GC PILLQIP+FFA Sbjct: 359 MISMNKLKDLAPKMKDIRERYK-GDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFA 417 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 IY+V+ ++E++ AP+ WI DL+ DP I PI+M +MF Sbjct: 418 IYRVLLNAIELKAAPWAFWIHDLSVMDPYFIL-------------------PILMGATMF 458 Query: 503 IQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +Q ++P D QA I+ ++PV+F F +FPAGL +YW +N+ S+VQQ VI K+ Sbjct: 459 LQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKIFA 518 Query: 562 AE 563 E Sbjct: 519 KE 520 >gi|283956364|ref|ZP_06373844.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 1336] gi|283792084|gb|EFC30873.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 1336] Length = 528 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 119/362 (32%), Positives = 194/362 (53%), Gaps = 46/362 (12%) Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHESNSWLGISDKYWASVF 263 ++P A +++ V V+ +K +E K D+EK +N +V Sbjct: 202 YRPNIAVDSYTVHGAL--VMDNKETIETYKDGDVEKDESAN----------------NVV 243 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL-FAGAKEFPTIHHYE 322 + S +++ F Y D AN+ I+ S + G+KE + + Sbjct: 244 MTSAFDRYYATFFYNFDKPLNVAISKDANKNPIVFAYSDNEFKAGGYIGSKEHVILRSID 303 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 PR E ++++GWF FIAKPMF +++ + +GN+G AI++ T+ V+++ FPL K Sbjct: 304 -----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNWGWAIVVMTLIVRIILFPLTYKS 358 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 +S +K++ PK+ ++RE++K PQ + M++LYK H NP++GC PILLQIP+FFA Sbjct: 359 MISMNKLKDLAPKMKDIRERYK-GDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFA 417 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 IY+V+ ++E++ AP+ WI DL+ DP I PI+M +MF Sbjct: 418 IYRVLLNAIELKAAPWAFWIHDLSVMDPYFIL-------------------PILMGATMF 458 Query: 503 IQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +Q ++P D QA I+ ++PV+F F +FPAGL +YW +N+ S+VQQ VI K+ Sbjct: 459 LQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFANNLCSLVQQWVINKIFA 518 Query: 562 AE 563 E Sbjct: 519 KE 520 >gi|90581132|ref|ZP_01236931.1| putative inner membrane protein translocase component YidC [Vibrio angustum S14] gi|90437653|gb|EAS62845.1| putative inner membrane protein translocase component YidC [Vibrio angustum S14] Length = 230 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 92/227 (40%), Positives = 144/227 (63%), Gaps = 21/227 (9%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 L D+GW FIA P+ L+++ + +VGN+G+AI++ T+ V+ L +PL K QY S A M+ + Sbjct: 10 LPDYGWSSFIASPLHELLAFIHGIVGNWGVAIIILTLIVRGLMYPLTKAQYTSMAKMRML 69 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPKI +RE+ Q + M++LYK +NPL GC P+L+Q+P+F A+Y V+++S E Sbjct: 70 QPKIQAMRERCGDDR-QRQSQEMMELYKKEKVNPLGGCLPLLIQMPIFIALYTVLNLSTE 128 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511 +R+APF+GWI++L+A D P+Y + PI+M +SMF K SP Sbjct: 129 LRNAPFFGWIQNLSAQD-----------PYY--------VLPILMGISMFFIQKNSPSTV 169 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q I+ +MPV+F FPAGL++YW SN+++++QQ +I + Sbjct: 170 TDPMQQKIMTFMPVIFTVFFLYFPAGLVLYWLTSNIVTLIQQTIIFR 216 >gi|317165572|gb|ADV09113.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae TCDC-NG08107] Length = 545 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 124/414 (29%), Positives = 199/414 (48%), Gaps = 41/414 (9%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 ++L N + ++ + + YL + + N S S RI+R + + Sbjct: 139 VRLSAPETNGLKIDKVYTFTKGSYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGY 198 Query: 215 GVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SWLGISDKYWASVFI- 264 G + + + + +SD++ + S E+ WLG+ + ++ S +I Sbjct: 199 FTHSYVGPVVYTPEGNFQKVSFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWIL 258 Query: 265 -PSKETSFHSQFKYLSDGHAR----YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 P S D R Y A S I G T L+AG + I Sbjct: 259 QPKGGQSVCVAGDCSIDIKRRNDKLYSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIA 318 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 + +L + + D+G ++ A P+F L++ +N++GN+G AI++ T+ VK + +PL Sbjct: 319 NIADNLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLT 373 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 Y S A M+ PK+ ++EK+ Q+AM+QLY INPL GC P+LLQIPV Sbjct: 374 NASYRSMAKMRAAAPKLQAIKEKYGDDR-MAQQQAMMQLYTDEKINPLGGCLPMLLQIPV 432 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F +Y + S+E+R AP+ GWI DL+ AD P+Y I PIIM+ Sbjct: 433 FIGLYWALFASVELRQAPWLGWITDLSRAD-----------PYY--------ILPIIMAA 473 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +MF Q ++PPP D QA ++ MP+VF FPAGL++YW +N+++I QQ Sbjct: 474 TMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527 >gi|86150951|ref|ZP_01069167.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 260.94] gi|86152990|ref|ZP_01071195.1| inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613009|ref|YP_001000640.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. jejuni 81-176] gi|167005567|ref|ZP_02271325.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. jejuni 81-176] gi|85842121|gb|EAQ59367.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 260.94] gi|85843875|gb|EAQ61085.1| inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni HB93-13] gi|87248917|gb|EAQ71880.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 81-176] Length = 528 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 119/362 (32%), Positives = 194/362 (53%), Gaps = 46/362 (12%) Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHESNSWLGISDKYWASVF 263 ++P A +++ V V+ +K +E K D+EK +N +V Sbjct: 202 YRPNIAVDSYTVHGAL--VMDNKETIETYKDGDVEKDESAN----------------NVV 243 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL-FAGAKEFPTIHHYE 322 + S +++ F Y D AN+ I+ S + G+KE + + Sbjct: 244 MTSAFDRYYATFFYNFDKPLNVAISKDANKNPIVFAYSDNEFKAGGYIGSKEHVILRSID 303 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 PR E ++++GWF FIAKPMF +++ + +GN+G AI++ T+ V+++ FPL K Sbjct: 304 -----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNWGWAIVVMTLIVRIILFPLTYKS 358 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 +S +K++ PK+ ++RE++K PQ + M++LYK H NP++GC PILLQIP+FFA Sbjct: 359 MISMNKLKDLAPKMKDIRERYK-GDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFA 417 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 IY+V+ ++E++ AP+ WI DL+ DP I PI+M +MF Sbjct: 418 IYRVLLNAIELKAAPWAFWIHDLSVMDPYFIL-------------------PILMGATMF 458 Query: 503 IQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +Q ++P D QA I+ ++PV+F F +FPAGL +YW +N+ S+VQQ VI K+ Sbjct: 459 LQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKIFA 518 Query: 562 AE 563 E Sbjct: 519 KE 520 >gi|254670910|emb|CBA07484.1| probable inner-membrane protein [Neisseria meningitidis alpha153] Length = 545 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 121/391 (30%), Positives = 190/391 (48%), Gaps = 40/391 (10%) Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYS 235 YL + + N S S RI+R + + G + + + + +S Sbjct: 162 YLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFS 221 Query: 236 DIEKSSISNFHESN-------SWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR-- 284 D++ + S E+ WLG+ + ++ S +I P S + D R Sbjct: 222 DLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRND 281 Query: 285 --YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y S I G T L+AG + I + +L + + D+G ++ Sbjct: 282 KLYSTSVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADNLQLAK-----DYGKVHWF 336 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK Sbjct: 337 ASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEK 396 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 397 YGDDR-MAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWI 455 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ AD P+Y I PIIM+ +MF Q ++PPP D QA ++ Sbjct: 456 TDLSRAD-----------PYY--------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKI 496 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MP+VF FPAGL++YW +N+++I QQ Sbjct: 497 MPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527 >gi|325204858|gb|ADZ00312.1| inner membrane protein OxaA [Neisseria meningitidis M01-240355] Length = 545 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 121/391 (30%), Positives = 190/391 (48%), Gaps = 40/391 (10%) Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYS 235 YL + + N S S RI+R + + G + + + + +S Sbjct: 162 YLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFS 221 Query: 236 DIEKSSISNFHESN-------SWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR-- 284 D++ + S E+ WLG+ + ++ S +I P S S D R Sbjct: 222 DLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCSAGDCRIDIKRRND 281 Query: 285 --YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y A S I G T L+AG + I + +L + + D+G ++ Sbjct: 282 KLYSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADNLQLAK-----DYGKVHWF 336 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK Sbjct: 337 ASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEK 396 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 397 YGDDR-MAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWI 455 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ AD P+Y I PIIM+ +M Q ++PPP D QA ++ Sbjct: 456 TDLSRAD-----------PYY--------ILPIIMAATMVAQTYLNPPPTDPMQAKMMKI 496 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MP++F FPAGL++YW +N+++I QQ Sbjct: 497 MPLIFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527 >gi|319639364|ref|ZP_07994115.1| inner membrane protein oxaA [Neisseria mucosa C102] gi|317399548|gb|EFV80218.1| inner membrane protein oxaA [Neisseria mucosa C102] Length = 548 Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 122/414 (29%), Positives = 200/414 (48%), Gaps = 41/414 (9%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 ++L N + ++ + + YL + +TN+ + S RI+R + + Sbjct: 142 VRLSAPETNGLKIDKVYTFTKGSYLVNVRFDITNSKGQPVNLSADYRIVRDHSEPEGQGY 201 Query: 215 GVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-------SWLGISDKYWASVFI- 264 + G + + + +SD++ + S E+ WLG+ + ++ S +I Sbjct: 202 FTRSYVGPVVYSPEGGFQKVSFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWIL 261 Query: 265 -PSKETSFHSQFKYLSDGHAR----YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 P S + D R Y A S I G T L+AG + I Sbjct: 262 QPKDGQSVCAAGDCRIDIKRRNDNLYSASVSVPLAAIQAGAKAETAINLYAGPQTTSVIA 321 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 + L + + D+G ++ A P+F L++ +N++GN+G AI++ T+ VK + +PL Sbjct: 322 NIADKLQLAK-----DYGKVHWFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLT 376 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 Y S A M+ PK+ ++EK+ Q+AM+QLYK INPL GC P+LLQIPV Sbjct: 377 NASYRSMAKMRAAAPKLQAIKEKYGDDR-MAQQQAMMQLYKDEKINPLGGCLPMLLQIPV 435 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F +Y + S+E+R AP+ GWI DL+ D PFY I P+IM+ Sbjct: 436 FIGLYWALFASVELRQAPWLGWITDLSRPD-----------PFY--------ILPLIMAA 476 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +MF Q ++PP D QA ++ MP++F FPAGL++YW +N+++I QQ Sbjct: 477 TMFAQTYLNPPSTDPMQAKMMKVMPLIFSIMFFFFPAGLVLYWVVNNLLTIAQQ 530 >gi|89902989|ref|YP_525460.1| 60 kDa inner membrane insertion protein [Rhodoferax ferrireducens T118] gi|89347726|gb|ABD71929.1| protein translocase subunit yidC [Rhodoferax ferrireducens T118] Length = 571 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 134/483 (27%), Positives = 224/483 (46%), Gaps = 58/483 (12%) Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 H D++ S LL SN + Y A+ ++ A P TV + G+ + Sbjct: 117 HADMADKSKHFVLLE-SNKDHTYMAQTGLIAGAAGGTFPTHKTVMTVAPGERTLQEGSNQ 175 Query: 158 LVFK----NANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTA 210 LV + + +T +L Y + V N + +++R KP Sbjct: 176 LVIRFESPELGGVKLVKTFTLTRGTYAVAVKHEVVNVGTAAVSPQLYLQLVRDGTKPLGE 235 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKET 269 + + G K + + DIE + + + S ++ + Y+AS ++ Sbjct: 236 SKFYSTFTGPAIYTEAKKYQKVDFKDIENNKVDVEKTAESGYVAMVQHYFASAWL----- 290 Query: 270 SFHSQFKYLSDGHAR-----------YQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 L DG R Y I PG S + FAG +E + Sbjct: 291 --------LGDGIKRDLFLRKVDTNLYAVGMITPMDNIAPGASKSVEARFFAGPQEEKVL 342 Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 + P E++ D+GW +AKP++ L+ + +GN+G +I+ + +K F+ L Sbjct: 343 -----EALAPGLELVKDYGWLTILAKPLYWLLHAIESFLGNWGWSIVALVLLLKAAFYWL 397 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 K Y S A MK + PK+ E+RE+ K +P Q +Q+ M+++Y+ +NP+ GC+PI++QIP Sbjct: 398 NAKAYASMAKMKAVNPKVTEMRERLKDNPQQ-MQQEMMRIYREEKVNPMGGCFPIMIQIP 456 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 VF A+Y V+ S+EMR+AP+ WI DL++ D PFY I P++M+ Sbjct: 457 VFIALYWVLLASVEMRNAPWILWIHDLSSPD-----------PFY--------ILPLVMT 497 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 L+ +Q ++P P D QA ++ +MP+ F FPAGL++YW +N++SI QQ +I Sbjct: 498 LTTVLQTSLNPAPPDPMQAKMMWFMPLAFSVMFFFFPAGLVLYWITNNILSIAQQWLINT 557 Query: 559 MHG 561 G Sbjct: 558 RMG 560 >gi|283954517|ref|ZP_06372036.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 414] gi|283793921|gb|EFC32671.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 414] Length = 454 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 95/237 (40%), Positives = 149/237 (62%), Gaps = 21/237 (8%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 PR E ++++GWF FIAKPMF + + + +GN+G AI++ T+ V+++ FPL K +S Sbjct: 228 PRLEAVVEYGWFTFIAKPMFEFLDFLHQYIGNWGWAIVVMTLIVRIVLFPLTYKSMISMN 287 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K++ PK+ ++RE++K PQ + M++LYK H NP++GC PILLQIP+FFAIY+V+ Sbjct: 288 KLKDLAPKMKDIRERYK-GDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVL 346 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ AP+ W+ DL+ DP I PI+M +MF+Q + Sbjct: 347 LNAIELKAAPWAFWVHDLSVMDPYFIL-------------------PILMGATMFLQQLI 387 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P D QA I+ ++PV+F F +FPAGL +YW +N+ S+VQQ VI K+ E Sbjct: 388 TPMAIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFINNLCSLVQQWVINKIFAKE 444 >gi|121611909|ref|YP_999716.1| 60 kDa inner membrane insertion protein [Verminephrobacter eiseniae EF01-2] gi|121556549|gb|ABM60698.1| protein translocase subunit yidC [Verminephrobacter eiseniae EF01-2] Length = 567 Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 102/267 (38%), Positives = 158/267 (59%), Gaps = 25/267 (9%) Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 +I PG S T LFAG P + + L+ P E++ D+GW +AKP++ L+ + Sbjct: 315 SIAPGASRTLDARLFAG----PQVETMLETLS-PGLELVKDYGWLTILAKPLYWLLEQLH 369 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 L+ N+G +I+ + +K+ F+ L K Y S A MK I PKI E+RE+ K P Q +Q+ Sbjct: 370 KLLRNWGWSIVGLVLLLKIAFYWLNAKAYASMAKMKAINPKIMEMRERLKDKP-QQMQQE 428 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+EMR+AP+ GWI DL+ DP Sbjct: 429 MMRIYREEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMRNAPWIGWIHDLSTPDP---- 484 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 LF I P++M+ S +Q ++P P D QA ++ +MP++F F Sbjct: 485 -LF--------------ILPLLMTASSLLQTALNPAPPDPMQAKMMWFMPLIFSVMFFFF 529 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHG 561 PAGL++YW +N++SI QQ +I G Sbjct: 530 PAGLVLYWLTNNILSIAQQWIINTRMG 556 >gi|261393238|emb|CAX50861.1| inner-membrane protein OxaA [Neisseria meningitidis 8013] Length = 545 Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 121/391 (30%), Positives = 191/391 (48%), Gaps = 40/391 (10%) Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYS 235 YL + + N S S RI+R + + G + + + + +S Sbjct: 162 YLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFS 221 Query: 236 DIEKSSISNFHESN-------SWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR-- 284 D++ + S E+ WLG+ + ++ S +I P S + + D R Sbjct: 222 DLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGECSIDIKRRND 281 Query: 285 --YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y A S I G T L+AG + I + +L + + D+G ++ Sbjct: 282 KLYSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADNLQLAK-----DYGKVHWF 336 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK Sbjct: 337 ASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRVAAPKLQAIKEK 396 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 397 YGDDR-MAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWI 455 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ AD P+Y I PIIM+ +M Q ++PPP D QA ++ Sbjct: 456 TDLSRAD-----------PYY--------ILPIIMAATMVAQTYLNPPPTDPMQAKMMKI 496 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MP+VF FPAGL++YW +N+++I QQ Sbjct: 497 MPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527 >gi|15677738|ref|NP_274901.1| putative inner membrane protein translocase component YidC [Neisseria meningitidis MC58] gi|121634185|ref|YP_974430.1| putative inner membrane protein translocase component YidC [Neisseria meningitidis FAM18] gi|38503191|sp|Q9JXS4|OXAA_NEIMB RecName: Full=Inner membrane protein oxaA gi|166975876|sp|A1KRZ8|OXAA_NEIMF RecName: Full=Inner membrane protein oxaA gi|7227164|gb|AAF42237.1| 60 kd inner-membrane protein [Neisseria meningitidis MC58] gi|120865891|emb|CAM09627.1| putative integral membrane protein [Neisseria meningitidis FAM18] gi|316985524|gb|EFV64471.1| 60Kd inner membrane family protein [Neisseria meningitidis H44/76] gi|325131545|gb|EGC54252.1| inner membrane protein OxaA [Neisseria meningitidis M6190] gi|325133546|gb|EGC56209.1| inner membrane protein OxaA [Neisseria meningitidis M13399] gi|325139200|gb|EGC61746.1| inner membrane protein OxaA [Neisseria meningitidis ES14902] gi|325141536|gb|EGC64005.1| inner membrane protein OxaA [Neisseria meningitidis 961-5945] gi|325143618|gb|EGC65937.1| inner membrane protein OxaA [Neisseria meningitidis M01-240013] gi|325197597|gb|ADY93053.1| inner membrane protein OxaA [Neisseria meningitidis G2136] gi|325200959|gb|ADY96414.1| inner membrane protein OxaA [Neisseria meningitidis H44/76] gi|325206814|gb|ADZ02267.1| inner membrane protein OxaA [Neisseria meningitidis M04-240196] Length = 545 Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 120/391 (30%), Positives = 191/391 (48%), Gaps = 40/391 (10%) Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYS 235 YL + + N S S RI+R + + G + + + + +S Sbjct: 162 YLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFS 221 Query: 236 DIEKSSISNFHESN-------SWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR-- 284 D++ + S E+ WLG+ + ++ S +I P S + + D R Sbjct: 222 DLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGRQSVCAAGECNIDIKRRND 281 Query: 285 --YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y S I G + L+AG + I + +L + + D+G ++ Sbjct: 282 KLYSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADNLQLAK-----DYGKVHWF 336 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK Sbjct: 337 ASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEK 396 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 397 YGDDR-MAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWI 455 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ AD P+Y I PIIM+ +MF Q ++PPP D QA ++ Sbjct: 456 TDLSRAD-----------PYY--------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKI 496 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MP+VF FPAGL++YW +N+++I QQ Sbjct: 497 MPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527 >gi|34557650|ref|NP_907465.1| putative inner membrane protein translocase component YidC [Wolinella succinogenes DSM 1740] gi|38502880|sp|P60037|OXAA_WOLSU RecName: Full=Inner membrane protein oxaA gi|34483367|emb|CAE10365.1| 60 KDA INNER-MEMBRANE PROTEIN [Wolinella succinogenes] Length = 536 Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 96/251 (38%), Positives = 147/251 (58%), Gaps = 26/251 (10%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + GAK+F + P ++++G+ F AKP+F+L+ + Y GN+G AI+L T Sbjct: 293 YIGAKDFRLLES-----IYPSLTDVVEYGFITFFAKPLFLLLDWLYKFCGNWGWAIVLLT 347 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + V+++ FPL K VS +K+I PK+ E++EK+K PQ LQ M++LYK H NP+ Sbjct: 348 LVVRIILFPLTYKGMVSMQKLKDIAPKMKEIQEKYK-GDPQKLQVHMMELYKKHGANPMG 406 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+LLQ+P+FFAIY+V+ ++E++ A + WI DL+ DP I Sbjct: 407 GCLPLLLQMPIFFAIYRVLYNAIELKGADWILWINDLSVMDPYFIL-------------- 452 Query: 489 HVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 PI+M SMF+Q ++P D Q + ++P++F F +FP+GL++YW SNV Sbjct: 453 -----PILMGASMFLQQHLTPTTFTDPMQEKVFKFLPLIFTFFFVTFPSGLVLYWFVSNV 507 Query: 548 ISIVQQAVIMK 558 SI QQ I K Sbjct: 508 FSIAQQLFINK 518 >gi|148245070|ref|YP_001219764.1| hypothetical protein COSY_0941 [Candidatus Vesicomyosocius okutanii HA] gi|166977423|sp|A5CVI2|OXAA_VESOH RecName: Full=Inner membrane protein oxaA gi|146326897|dbj|BAF62040.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 541 Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 157/573 (27%), Positives = 278/573 (48%), Gaps = 56/573 (9%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID---- 59 N +F+ IA+ + I W + + I++ NN + +K + ++NS +D Sbjct: 3 NQKFFLIIAIFLSIFLLWDKWEITHTIDKNNNLISQTK-IKNTSTINNSLTNQNLDIPSV 61 Query: 60 -DRAQALSMS--------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 +R L + P +K L I+ KG + L Y +++ S L Sbjct: 62 TNRNNKLDLPNTDTKNQIPFTTVKTDLLTLEISHKGGTIQNAWLNDYPIEIDSEQKF-QL 120 Query: 111 LSPSNTK--NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 LS K A L + + +S ++ + G L + +K+ N I+ Sbjct: 121 LSDRTGKIFQAQSGLLPQGKMPTHHSIFSSKNIYYQMDGNNLV----VPFTWKSENGIIV 176 Query: 169 ERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 + +++ Y+ I +TN + + + + +++R+ P G A D+ Sbjct: 177 NKRYHFNKNSYVVGIDYQITNTTNNTLHITSYTQLIRNIPDQDNMIMPTYTGG-ARFNDQ 235 Query: 228 SLVEQ-KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + E+ ++ D + +++ W+ + + Y+ IP+ K ++D +Y Sbjct: 236 DVYEKIEFEDFDDQPKTSY--KGGWMAMIEHYFFVAVIPNLNQIHTYSSKIIND---KYL 290 Query: 287 AKFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 E++I PG + T N L+ G KE I D P + +D+G + IAKP Sbjct: 291 LTVVNPELSIAPGATKTIINSNLYIGPKEQSHI-----DNVAPGLDKTVDYGILFIIAKP 345 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + L+++ Y+++ ++G +I++ T+ +KL F+ L++K Y S A M+ + P++ +L+E + Sbjct: 346 LSELLNWIYSIIHSWGYSIIILTLLIKLAFYKLSEKSYRSMAGMRQLAPRLKKLKETYGD 405 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + Q L K ++LYK INP +GC PIL+QIPVF ++Y V+ +E+R APFW ++ DL Sbjct: 406 NK-QKLGKKTMELYKKEKINPASGCLPILVQIPVFISLYWVLLEMVELRQAPFW-YLTDL 463 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 +A DP +Y I P+IM +SMFIQ K++PPP D QA I+ +P Sbjct: 464 SAPDP-----------YY--------ILPLIMGISMFIQQKLNPPPPDPIQAKIMMALPF 504 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 VF FP+GL++YW +N++SI QQ VI K Sbjct: 505 VFTIFFLWFPSGLVLYWMINNILSITQQWVINK 537 >gi|71066698|ref|YP_265425.1| putative inner membrane protein translocase component YidC [Psychrobacter arcticus 273-4] gi|71039683|gb|AAZ19991.1| protein translocase subunit yidC [Psychrobacter arcticus 273-4] Length = 565 Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 104/325 (32%), Positives = 180/325 (55%), Gaps = 33/325 (10%) Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 ++D E ++ S+ W+GI Y+ S + P +F +F G Y F++ Sbjct: 259 FNDGELTTTSD----KGWVGIVQHYFVSAWTPE---NFTGKFFSRETGD-DYFIGFNSQP 310 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + + P K +T L+AG P + KD+A +D+G + I+K +F L+ Sbjct: 311 VNVAPDKQVTLNATLYAG----PKVQSELKDVA-AGLNQTVDYGLLWPISKILFALLDGI 365 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + ++GN+G +I+L T+ VK + K Y S A M+ I P++ L+E+ ++ Q+ Sbjct: 366 HKIIGNWGWSIILLTILVKFALMWFSNKSYYSMAKMRAIAPRLAALKEEHGDDRMKMSQE 425 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M+ +YK +NP+AGC PIL+Q+P+F A+Y V+ S+E+RHAP+ WI+DL+A DP I Sbjct: 426 -MMAMYKEEKVNPMAGCLPILMQMPIFLALYWVLVESIELRHAPWVLWIQDLSAMDPWFI 484 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 P++M +SMF+Q +++P PAD QA ++ ++P++F + Sbjct: 485 L-------------------PLLMGVSMFVQQQLNPQPADPMQAKVMKFLPIIFTAFMLF 525 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW+ +N+ S+ Q ++ K Sbjct: 526 FPAGLVLYWTVNNLFSMTHQYIVNK 550 >gi|325267553|ref|ZP_08134205.1| inner membrane protein OxaA [Kingella denitrificans ATCC 33394] gi|324980903|gb|EGC16563.1| inner membrane protein OxaA [Kingella denitrificans ATCC 33394] Length = 556 Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 145/573 (25%), Positives = 266/573 (46%), Gaps = 80/573 (13%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 F+A ALS++I++ + Y P QPN + A A L Sbjct: 7 FIATALSMLILWGYGQMYPSP----------------QPNTAATATAQQAQVQAASPLGA 50 Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 + + + ++ I+ K + L Y+ V L A L Y+ Sbjct: 51 TSPITVNTDTVQAVIDEKSGDLRGMTLNQYNSAADEQQKFVLL--------ADGKPLTYI 102 Query: 128 STANNIELPNSNTVWNL----------ISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 + + ++ N + L +SG L +KL + AN + ++ + ++ Sbjct: 103 AQSELVDANGKNWLEGLTFSSAQKNYTLSGDTLE----VKLSAQAANGVNIDKVYTFRKN 158 Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLGDKSLVEQ-K 233 YL + V N I+ +++R KP+ G + D ++ K Sbjct: 159 SYLVNVRFDVKNTGSAPIQVGTNYQVVRDNSKPEGEGWFMSSYNGPVVYTPDSDEFQKVK 218 Query: 234 YSDIEK-------SSISNFHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR 284 YSD++ ++ + ++G+ Y+ S +I P + ++ + + R Sbjct: 219 YSDLDDDFQTGKDTAEYQRKATGGYVGMIQHYFVSAWIMQPQEGSNICEKAACTVNMKKR 278 Query: 285 ----YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y + + + + G S + L+AG P I K ++ P+FE+ D+G + Sbjct: 279 SDNLYSSGVNVAPVQVAAGSSQSFGAQLYAG----PQITSILKTVS-PKFELTKDYGRVH 333 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 A P+F L+++ ++L+ N+G AI++ T+ VK + +PL K Y S A M+ + PK++ L+ Sbjct: 334 IFAAPLFALLNWLHSLINNWGWAIIVLTIIVKAILYPLNNKAYRSMAKMRTVAPKMEALK 393 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 +++ LQ+AM++LY+ INPL GC P+L+Q+P+F +Y +I +S+E+R AP+ G Sbjct: 394 KQYGDDK-MGLQQAMMKLYRDEKINPLGGCLPMLVQMPIFIGLYWMIFLSVELRQAPWLG 452 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ D PF+ I PI+M+ +M+ Q ++PPP+D QA ++ Sbjct: 453 WITDLSRPD-----------PFF--------ILPILMAATMWFQTTLNPPPSDPTQAQMM 493 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MP++F FPAGL++Y+ +N+++I QQ Sbjct: 494 KIMPLMFSVMFFFFPAGLVLYYVVNNLLTIAQQ 526 >gi|325127482|gb|EGC50411.1| inner membrane protein OxaA [Neisseria meningitidis N1568] Length = 545 Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 120/391 (30%), Positives = 191/391 (48%), Gaps = 40/391 (10%) Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYS 235 YL + + N S S RI+R + + G + + + + +S Sbjct: 162 YLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFS 221 Query: 236 DIEKSSISNFHESN-------SWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR-- 284 D++ + S E+ WLG+ + ++ S +I P S + D R Sbjct: 222 DLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRND 281 Query: 285 --YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y S I G + L+AG + I + +L + + D+G ++ Sbjct: 282 KLYSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADNLQLAK-----DYGKVHWF 336 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK Sbjct: 337 ASPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEK 396 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 397 YGDDR-MAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWI 455 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ +D P+Y I PIIM+ +MF Q ++PPP D QA ++ Sbjct: 456 TDLSRSD-----------PYY--------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKI 496 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MP+VF FPAGL++YW +N+++I QQ Sbjct: 497 MPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527 >gi|294789683|ref|ZP_06754916.1| inner membrane protein OxaA [Simonsiella muelleri ATCC 29453] gi|294482395|gb|EFG30089.1| inner membrane protein OxaA [Simonsiella muelleri ATCC 29453] Length = 555 Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 90/226 (39%), Positives = 144/226 (63%), Gaps = 20/226 (8%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P+ ++L D+G + A P+F L++ +N +GN+G AI+ T+ VK + FPL +K Y S A Sbjct: 318 PKLDLLKDYGRVHIFAAPLFWLLNKLHNFIGNWGWAIIFLTLIVKAVLFPLNQKAYKSMA 377 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ + PK++ L++++ +Q+AMI+LYK INPL GC P+L+Q+P+F +Y +I Sbjct: 378 KMRTVAPKMEALKKQYANDQ-MGMQQAMIKLYKDEQINPLGGCLPMLIQMPIFIGLYWMI 436 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 +S+E+R AP+ GWI DL+ AD PFY I PI+M+ +M+ Q K+ Sbjct: 437 FLSVELRQAPWLGWITDLSRAD-----------PFY--------ILPILMAATMWFQTKL 477 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 SPPP+D QA ++ MP++F FPAGL++Y+ +N+++I QQ Sbjct: 478 SPPPSDPMQAQMMKIMPLMFSIMFFFFPAGLVLYYVVNNLLTIAQQ 523 >gi|304388454|ref|ZP_07370560.1| YidC/Oxa1 family membrane protein insertase [Neisseria meningitidis ATCC 13091] gi|304337571|gb|EFM03734.1| YidC/Oxa1 family membrane protein insertase [Neisseria meningitidis ATCC 13091] Length = 545 Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 120/391 (30%), Positives = 190/391 (48%), Gaps = 40/391 (10%) Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYS 235 YL + + N S S RI+R + + G + + + + +S Sbjct: 162 YLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFS 221 Query: 236 DIEKSSISNFHESN-------SWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR-- 284 D++ + S E+ WLG+ + ++ S +I P S + D R Sbjct: 222 DLDNDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRND 281 Query: 285 --YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y S I G + L+AG + I + +L + + D+G ++ Sbjct: 282 KLYSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADNLQLAK-----DYGKVHWF 336 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK Sbjct: 337 ASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEK 396 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 397 YGDDR-MAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWI 455 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ AD P+Y I PIIM+ +MF Q ++PPP D QA ++ Sbjct: 456 TDLSRAD-----------PYY--------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKI 496 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MP+VF FPAGL++YW +N+++I QQ Sbjct: 497 MPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527 >gi|206603435|gb|EDZ39915.1| Putative inner-membrane protein [Leptospirillum sp. Group II '5-way CG'] Length = 511 Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 155/562 (27%), Positives = 263/562 (46%), Gaps = 89/562 (15%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR-AQALS 66 + I+ ++II Y W N +K T P Q ++ + +++D Q+LS Sbjct: 10 LIVISFNLIIYYFWGP----------QNRQKPSTT---PKQAISALSVPMVNDTYDQSLS 56 Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 ++N + S++++ Q L YH SSN ++LL +T+ Y A + Sbjct: 57 ------IQNKDVRWSVSMRTGQIYQWTLLHYHH--SSNHKYLSLL---DTEKGY-AGMGL 104 Query: 127 VSTANNIELP--NSNTVWN---LISGKILTPTTPIKLV--FKNANNILFERTISLDEHYL 179 S + +P + VW+ + G ++ + LV +K N++ R L YL Sbjct: 105 FSRDSGTLVPVLPESIVWDNAQIRPGLVVVSSAGGNLVETYKMNGNVVILRFHFLPSGYL 164 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 I + N S + F G + T+G + G K+ +++K Sbjct: 165 --ISSHLENPSHANVVF---GSGLNFGVSALKQTYGTE-----FQGPVYEATGKFQEMKK 214 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 F W+G DKY+ +I S + K +G + + S N + Sbjct: 215 DGSLFFDSGLKWVGNEDKYFIG-YIASSTPGPSVEIK--KNGSSSWFQLLSKNSMDFK-- 269 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF--------IAKPMFMLMS 351 ++ K + + + L ID+GWF F +AKP+F+LMS Sbjct: 270 --------IYGEPKRYKLLKEQDSGLIDT-----IDFGWFMFGRILLISFLAKPIFLLMS 316 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 Y +V N+G+AI+L T+ +K++F PLA Y S M+++QP+I +L+ KFK L Sbjct: 317 YLVGIVHNYGVAIILVTILIKIIFSPLAYMSYKSIYEMQSLQPEIKKLQTKFKDD-KAAL 375 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +A+++LYK +NPL GC P+L+QIPVF A+Y +++ ++E+R APF WI DL+ DP Sbjct: 376 NQALMELYKERRVNPLGGCLPMLVQIPVFVALYNILNNTVELRQAPFILWIHDLSLKDPY 435 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 + PI+M ++M +Q K++P D Q ++ ++PV+ F Sbjct: 436 YVL-------------------PIVMGITMILQYKLNPSSPDPVQQKVMMFVPVIMTFFF 476 Query: 532 SSFPAGLIIYWSWSNVISIVQQ 553 +FPAGL++YW +NV++I QQ Sbjct: 477 LNFPAGLVLYWLVNNVLTIGQQ 498 >gi|295698381|ref|YP_003603036.1| inner membrane protein OxaA [Candidatus Riesia pediculicola USDA] gi|291157428|gb|ADD79873.1| inner membrane protein OxaA [Candidatus Riesia pediculicola USDA] Length = 547 Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 112/422 (26%), Positives = 225/422 (53%), Gaps = 56/422 (13%) Query: 156 IKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-- 212 + L+F + NN+++E+ + Y ++ +TNNS + I S G++ ++ ++ N Sbjct: 150 VPLIFVSKNNVIYEKIYVFKRDQYDIEVEYRITNNSAENIEISIFGQLKQNVEESYDNRL 209 Query: 213 ---TFGVQEGFIAVLGDKSLVEQK--YSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 F V+ A +K + D+ K + H + W+ + +Y+AS +I + Sbjct: 210 ENRNFSVRSYRGAAYSSDQTKYKKCTFKDLMKKKLE-IHTKSGWIAMLQQYFASAWILND 268 Query: 268 ETSFHSQFKYLSDGHA-RYQAK-----FSANEITILPGKSITTTNFLFAGAK---EFPTI 318 + Y++ ++ +Q K + +I I + + L+ G + E + Sbjct: 269 Q--------YINSVYSINFQGKSAIIGYRTPKILIKSNERFQYISKLWIGPELQTEMSKV 320 Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 +Y ++ +D+GW +FI++P+F L+ + Y VGN+G +I++ T V+ L +PL Sbjct: 321 ANY--------LDLTVDYGWLWFISQPLFQLLQFIYRFVGNWGFSIVIITFIVRGLMYPL 372 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 K QY+S A ++ +QPK++E++ + + ++ Q+ +++LY+ +NPL GC P+++Q+P Sbjct: 373 TKAQYISMAKIRLLQPKLEEIKNRIGEDKNKMSQE-VVELYRKEKVNPLGGCLPLIIQMP 431 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 +F A+Y ++ S+E+R APF WI+DL++ DP ++L P++M Sbjct: 432 IFLALYYMLIGSVELRQAPFIYWIQDLSSKDPY----------YFL---------PLLMG 472 Query: 499 LSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +M+ KMSP ++ + I+N++P+ F FP+GL++Y+ SN+++I+QQ I Sbjct: 473 CTMYFIQKMSPNTNTSELSREKIINYIPIFFTIFFLWFPSGLVLYYIISNLVTIIQQKAI 532 Query: 557 MK 558 + Sbjct: 533 YR 534 >gi|258593684|emb|CBE70025.1| putative Inner membrane protein oxaA [NC10 bacterium 'Dutch sediment'] Length = 557 Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 107/313 (34%), Positives = 172/313 (54%), Gaps = 22/313 (7%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 SW + + Y+A+ +P + S + K + + ++ PG +T ++ Sbjct: 251 SWTALQNLYFAAALLPEGKGSTATIRKGPEE---QPVIALVTPTQSLEPGGGLTQRVAVY 307 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 +G K+ ++ DL+ ++D GWF +A+P L+ + + GN+G+AI+L +V Sbjct: 308 SGPKDLDHLNAAGSDLS-----KIVDLGWFDALARPALHLLRFLNRISGNYGVAIILVSV 362 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 K++ PL K S MK +QPKI + E+ K + PQ Q+ ++ LYK H +NPL G Sbjct: 363 LQKIVLHPLTAKSLRSMQAMKALQPKIAAISERNKNN-PQKKQQEVMGLYKKHGVNPLGG 421 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI--LPFYLPGF 487 C P+L+Q+P+F A+Y +S S+EM APF WIKDL+ D F ++G+ PF L Sbjct: 422 CLPMLIQLPIFVALYNALSSSVEMWRAPFL-WIKDLSQPDALFAFDVWGLKDYPFNL--- 477 Query: 488 MHVGIWPIIMSLSMFIQMKMSPP-PADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWS 545 ++M SMF Q KMSPP +D QA ++ W MP +F F +FP+GL++YW S Sbjct: 478 -----LALLMGASMFFQQKMSPPSSSDPQQAKLMLWMMPTMFTFMFWTFPSGLVLYWLVS 532 Query: 546 NVISIVQQAVIMK 558 N++ + QQ + K Sbjct: 533 NILQMGQQQWLQK 545 >gi|161869308|ref|YP_001598475.1| putative inner membrane protein translocase component YidC [Neisseria meningitidis 053442] gi|189036354|sp|A9M152|OXAA_NEIM0 RecName: Full=Inner membrane protein oxaA gi|161594861|gb|ABX72521.1| preprotein translocase YidC subunit [Neisseria meningitidis 053442] gi|308390001|gb|ADO32321.1| putative inner membrane protein translocase component YidC [Neisseria meningitidis alpha710] gi|319409783|emb|CBY90091.1| inner-membrane protein OxaA [Neisseria meningitidis WUE 2594] gi|325129442|gb|EGC52272.1| inner membrane protein OxaA [Neisseria meningitidis OX99.30304] gi|325135498|gb|EGC58116.1| inner membrane protein OxaA [Neisseria meningitidis M0579] gi|325201458|gb|ADY96912.1| inner membrane protein OxaA [Neisseria meningitidis M01-240149] gi|325207439|gb|ADZ02891.1| inner membrane protein OxaA [Neisseria meningitidis NZ-05/33] Length = 545 Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 120/391 (30%), Positives = 190/391 (48%), Gaps = 40/391 (10%) Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYS 235 YL + + N S S RI+R + + G + + + + +S Sbjct: 162 YLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFS 221 Query: 236 DIEKSSISNFHESN-------SWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR-- 284 D++ + S E+ WLG+ + ++ S +I P S + D R Sbjct: 222 DLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRND 281 Query: 285 --YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y S I G + L+AG + I + +L + + D+G ++ Sbjct: 282 KLYSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADNLQLAK-----DYGKVHWF 336 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK Sbjct: 337 ASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEK 396 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 397 YGDDR-MAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWI 455 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ AD P+Y I PIIM+ +MF Q ++PPP D QA ++ Sbjct: 456 TDLSRAD-----------PYY--------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKI 496 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MP+VF FPAGL++YW +N+++I QQ Sbjct: 497 MPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527 >gi|218767519|ref|YP_002342031.1| putative inner membrane protein translocase component YidC [Neisseria meningitidis Z2491] gi|38503190|sp|Q9JW48|OXAA_NEIMA RecName: Full=Inner membrane protein oxaA gi|121051527|emb|CAM07824.1| putative integral membrane protein [Neisseria meningitidis Z2491] Length = 545 Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 120/391 (30%), Positives = 190/391 (48%), Gaps = 40/391 (10%) Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYS 235 YL + + N S S RI+R + + G + + + + +S Sbjct: 162 YLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFS 221 Query: 236 DIEKSSISNFHESN-------SWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR-- 284 D++ + S E+ WLG+ + ++ S +I P S + D R Sbjct: 222 DLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRND 281 Query: 285 --YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y S I G + L+AG + I + +L + + D+G ++ Sbjct: 282 KLYSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADNLQLAK-----DYGKVHWF 336 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK Sbjct: 337 ASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEK 396 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 397 YGDDR-MAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWI 455 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ AD P+Y I PIIM+ +MF Q ++PPP D QA ++ Sbjct: 456 TDLSRAD-----------PYY--------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKI 496 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MP+VF FPAGL++YW +N+++I QQ Sbjct: 497 MPLVFSVMFFFFPAGLVLYWVINNLLTIAQQ 527 >gi|326562320|gb|EGE12646.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis 103P14B1] Length = 557 Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/315 (32%), Positives = 172/315 (54%), Gaps = 28/315 (8%) Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ I Y+ S + PS SF + F + G Y +++ I + GK IT Sbjct: 260 NISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGKDFYIG-YNSPVINVASGKQIT 316 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+AG K + + L +D+G + I+K +F ++ ++GN+G + Sbjct: 317 LNSTLYAGPKVQSEMASVAEGL-----NQTVDYGLLWPISKVLFAVLDNINKVIGNWGWS 371 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K + + M+QLY+ Sbjct: 372 IIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDDR-MAMSQEMMQLYRDEK 430 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+AGC PIL+Q+P+F +Y V+ S+E+RHAP+ GWI DL+A DP I Sbjct: 431 VNPMAGCLPILIQMPIFLGLYWVLVESVELRHAPWIGWITDLSAMDPWFIL--------- 481 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 PI M ++MF+Q ++P P D QA ++ +P++FV + FPAGL++YW+ Sbjct: 482 ----------PIFMGMTMFVQQMLNPQPTDPMQAKMMKILPMIFVVFMLWFPAGLVLYWT 531 Query: 544 WSNVISIVQQAVIMK 558 +N+ S+ Q ++ K Sbjct: 532 VNNLFSMTHQHLVNK 546 >gi|332531205|ref|ZP_08407118.1| membrane protein insertase, yidc/oxa1 family domain containing [Hylemonella gracilis ATCC 19624] gi|332039312|gb|EGI75725.1| membrane protein insertase, yidc/oxa1 family domain containing [Hylemonella gracilis ATCC 19624] Length = 571 Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 115/331 (34%), Positives = 178/331 (53%), Gaps = 32/331 (9%) Query: 234 YSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + DIEK ES N ++ + Y+AS ++ + + +S+ Y A Sbjct: 259 FGDIEKGKADFDKESTNGYVAMVQHYFASAWLLADGVQREIFVRKVSNN--LYAVGMIAP 316 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI--PRFEMLIDWGWFYFIAKPMFMLM 350 + PG + LF G +E EK L P E++ D+GW +AKP++ L+ Sbjct: 317 LQALAPGATRVLDARLFVGPQE-------EKQLEALAPGLELVKDYGWLTILAKPLYWLL 369 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++L+ N+G +I+ V +K+ F+ L K Y S A MK I P+I E+R++ K P Q Sbjct: 370 DKLHDLLHNWGWSIVALVVLLKIAFYWLNAKAYASMAKMKAIAPRITEMRDRLKDKPQQ- 428 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 +Q+ M+++Y+ +NPL GC PI++QIPVF A+Y V+ S+EMR+AP+ WIKDL+ DP Sbjct: 429 MQQEMMRIYRDEKVNPLGGCLPIMIQIPVFIALYWVLLSSVEMRNAPWILWIKDLSTQDP 488 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I P++M+L+ +Q ++P P D QA ++ MP+VF Sbjct: 489 YYIL-------------------PLLMTLTTMLQTALNPAPPDPMQAKLMWIMPLVFSVM 529 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++YW +NV+SI QQ VI K G Sbjct: 530 FFFFPAGLVLYWVTNNVLSIAQQWVINKRMG 560 >gi|322379151|ref|ZP_08053547.1| 60 kDa inner-membrane protein [Helicobacter suis HS1] gi|322381048|ref|ZP_08055076.1| inner membrane protein translocase component YidC [Helicobacter suis HS5] gi|321146518|gb|EFX41390.1| inner membrane protein translocase component YidC [Helicobacter suis HS5] gi|321148414|gb|EFX42918.1| 60 kDa inner-membrane protein [Helicobacter suis HS1] Length = 547 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 117/340 (34%), Positives = 185/340 (54%), Gaps = 43/340 (12%) Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 +LG + +K D + F +S +++ D+Y+ S+F F S Sbjct: 236 LLGTQDHKLEKIEDGKAKQTQTF-KSTTFIASVDRYYTSLF-----------FTKDSPLD 283 Query: 283 ARYQAKFSANEITILPGKSITTTNFL--FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 A +A+ S + LP S+ L + G K+ H + ++ P +I++G Sbjct: 284 AIIEAQPSKDP---LPFVSLKGNAILHGYIGPKD----HRLLEQIS-PMLTKVIEYGVIT 335 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F A+P+F+L+ Y + N+G AI+L T+ V+++ +PL+ K VS +K++ PK+ EL+ Sbjct: 336 FFARPVFLLLDYLHTYTHNWGWAIILLTLIVRIILYPLSYKGMVSMQKIKDLAPKMKELQ 395 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K S PQ LQ M+QLYK H NPL GC PILLQIPVFFAIY+V+ ++E++ A + Sbjct: 396 EKYK-SDPQKLQMHMMQLYKKHGANPLGGCLPILLQIPVFFAIYRVLYNAVELKSAGWML 454 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI DL+ DP I P++M +SM+ Q ++P D QA I Sbjct: 455 WIHDLSLMDPYFIL-------------------PLLMGISMYAQQALTPSTITDPTQAKI 495 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P+ F L +FPAGL++YW+ +N+ SI+QQ +I +M Sbjct: 496 FKMLPLFFTIFLITFPAGLVLYWTTNNIFSIIQQWLINQM 535 >gi|317181133|dbj|BAJ58919.1| putative inner membrane protein translocase component YidC [Helicobacter pylori F32] Length = 546 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 94/233 (40%), Positives = 143/233 (61%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 319 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K I PK+ EL+EK+K P Q LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 379 KLKEIAPKMKELQEKYKDEP-QKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 438 YNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGASMYWHQSV 478 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 TPSSVTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKI 531 >gi|317178154|dbj|BAJ55943.1| putative inner membrane protein translocase component YidC [Helicobacter pylori F16] Length = 546 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 94/233 (40%), Positives = 143/233 (61%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 319 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K I PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 379 KLKEIAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 438 YNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGTSMYWHQSV 478 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 TPSSVTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 531 >gi|326575524|gb|EGE25449.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis 101P30B1] Length = 547 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/315 (32%), Positives = 172/315 (54%), Gaps = 28/315 (8%) Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ I Y+ S + PS SF + F + G Y +++ I + GK IT Sbjct: 250 NISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGKDFYIG-YNSPVINVASGKQIT 306 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+AG K + + L +D+G + I+K +F ++ ++GN+G + Sbjct: 307 LNSTLYAGPKVQSEMASVAEGL-----NQTVDYGLLWPISKVLFAVLDNINKVIGNWGWS 361 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K + + M+QLY+ Sbjct: 362 IIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDDR-MAMSQEMMQLYRDEK 420 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+AGC PIL+Q+P+F +Y V+ S+E+RHAP+ GWI DL+A DP I Sbjct: 421 VNPMAGCLPILIQMPIFLGLYWVLVESVELRHAPWIGWITDLSAMDPWFIL--------- 471 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 PI M ++MF+Q ++P P D QA ++ +P++FV + FPAGL++YW+ Sbjct: 472 ----------PIFMGMTMFVQQMLNPQPTDPMQAKMMKILPMIFVVFMLWFPAGLVLYWT 521 Query: 544 WSNVISIVQQAVIMK 558 +N+ S+ Q ++ K Sbjct: 522 VNNLFSMTHQHLVNK 536 >gi|226942148|ref|YP_002797222.1| inner membrane protein translocase component YidC [Laribacter hongkongensis HLHK9] gi|254772999|sp|C1D6H8|OXAA_LARHH RecName: Full=Inner membrane protein oxaA gi|226717075|gb|ACO76213.1| YidC [Laribacter hongkongensis HLHK9] Length = 550 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 145/561 (25%), Positives = 248/561 (44%), Gaps = 51/561 (9%) Query: 9 VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA-LSM 67 V I LS +++ WQ ++ P+ + K + QP+ A D A L+ Sbjct: 8 VFIVLSFGLLFVWQEYFA-PK-----PQPKPVAAAVQPDGTPAPATARPADSPATGKLTS 61 Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 + + + + IN G L L + + P +L Y A+ + Sbjct: 62 AQTITVTTDLVKAQINTAGGDIRSLELLTQGAIDNPDKPF--MLMTEQGGRTYVAQSGLL 119 Query: 128 STANNIELPNSNTVWNL-ISGKILTP---TTPIKLVFKNANNILFERTISLD-EHYLFKI 182 S+ + LP T++ + L P T + L N + ++ + + Y+ + Sbjct: 120 SS--DASLPTHKTLYAADKTAYTLLPDQNTLTVTLAAAPVNGVEVKKIFTFKRDSYVIDV 177 Query: 183 VDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + N+S + + R++R P+ ++ G + + D+ K Sbjct: 178 RYDIINHSDKPVDATAYYRLLRDGKAPEGESSMAHTFTGPAVYTETGKFQKVSFEDLAKG 237 Query: 241 SISNFHES-NSWLGISDKYWASVFIPSK-------ETSFHSQFKYLSDGHARYQAKFSAN 292 ++ N W+ + Y+ S +I ++ QF+ Y A Sbjct: 238 KGDYVRQADNGWVAMVQHYFVSAWILKTNDGKSVCSSAEACQFELKPAAGDLYSAGVLVK 297 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + G+ + L+AG ++ + L + + D+GW IA P+F L+ Sbjct: 298 LPVVAAGQQYSIDMPLYAGPEDTRRMATVAPGLVLTK-----DYGWVTIIATPLFWLLDK 352 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 Y LV N+G AI+L TV VK F+PL+ Y S A MK + P++ L+E++ Q Q Sbjct: 353 LYGLVHNWGWAIVLLTVLVKAAFYPLSAASYRSMAKMKALAPRMQRLKEQYGDDR-QKFQ 411 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 +A +++YKT +NPL GC PI++QIPVF +Y + S+E+R AP+ WI DLA D Sbjct: 412 QATMEMYKTEKVNPLGGCLPIVVQIPVFIGLYWALLASVELRQAPWILWIHDLAKPD--- 468 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 P+Y I P +M+ +M++Q ++PPPAD QA ++ MP+ F Sbjct: 469 --------PYY--------ILPALMAATMYLQTFLNPPPADPLQAKMMKIMPLAFSVMFF 512 Query: 533 SFPAGLIIYWSWSNVISIVQQ 553 FPAGL++YW +N++SI QQ Sbjct: 513 FFPAGLVLYWLVNNILSIAQQ 533 >gi|217033919|ref|ZP_03439343.1| hypothetical protein HP9810_870g51 [Helicobacter pylori 98-10] gi|216943682|gb|EEC23127.1| hypothetical protein HP9810_870g51 [Helicobacter pylori 98-10] Length = 546 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 94/233 (40%), Positives = 143/233 (61%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 319 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K I PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 379 KLKEIAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 438 YNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGASMYWHQSV 478 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 TPSSVTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKI 531 >gi|315585837|gb|ADU40218.1| inner membrane protein OxaA [Helicobacter pylori 35A] Length = 546 Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 94/233 (40%), Positives = 143/233 (61%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 319 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K I PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 379 KLKEIAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 438 YNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGASMYWHQSV 478 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 TPSSVTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 531 >gi|332674216|gb|AEE71033.1| inner membrane protein OxaA [Helicobacter pylori 83] Length = 546 Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 94/233 (40%), Positives = 143/233 (61%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 319 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K I PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 379 KLKEIAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 438 YNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGASMYWHQSV 478 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 TPSSVTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 531 >gi|317182655|dbj|BAJ60439.1| putative inner membrane protein translocase component YidC [Helicobacter pylori F57] Length = 546 Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 94/233 (40%), Positives = 143/233 (61%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 319 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K I PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 379 KLKEIAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 438 YNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGASMYWHQSV 478 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 TPSSVTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKI 531 >gi|296114113|ref|YP_003628051.1| protein translocase insertase subunit YidC [Moraxella catarrhalis RH4] gi|295921807|gb|ADG62158.1| protein translocase insertase subunit YidC [Moraxella catarrhalis RH4] Length = 556 Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 173/315 (54%), Gaps = 28/315 (8%) Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ I Y+ S + PS SF + F + G+ Y +++ I + GK IT Sbjct: 259 NISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGNDFYIG-YNSPVINVASGKQIT 315 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+AG K + + L +D+G + I+K +F ++ ++GN+G + Sbjct: 316 LNSTLYAGPKVQSEMASVAEGL-----NQTVDYGLLWPISKVLFAILDNINKVIGNWGWS 370 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K + + M+QLY+ Sbjct: 371 IIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDDR-MAMSQEMMQLYRDEK 429 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A DP I Sbjct: 430 VNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDPWFIL--------- 480 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 PI M ++MF+Q ++P P D QA ++ +P++FV + FPAGL++YW+ Sbjct: 481 ----------PIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVFMLWFPAGLVLYWT 530 Query: 544 WSNVISIVQQAVIMK 558 +N+ S+ Q ++ K Sbjct: 531 VNNLFSMTHQHLVNK 545 >gi|332533704|ref|ZP_08409563.1| OxaI/YidC membrane insertion protein [Pseudoalteromonas haloplanktis ANT/505] gi|332036868|gb|EGI73329.1| OxaI/YidC membrane insertion protein [Pseudoalteromonas haloplanktis ANT/505] Length = 545 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 152/572 (26%), Positives = 269/572 (47%), Gaps = 65/572 (11%) Query: 8 FVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 F+ I L S ++ W N Y P+ + QT++ + + Y D A Sbjct: 7 FLLIGLMLVSFLLFQEWDNDYNKPKA----DPSATTQTLQANSPESDDYIPSSSDSGLPA 62 Query: 65 ---LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 L+ +E+ I+ KG + +L Y S +P + LL ++ YF Sbjct: 63 SATLAKRSVIEITTDVFKVKIDTKGGDIVETDLLQYEKTKGSETPYM-LLGQLDSGKQYF 121 Query: 122 AELDYV------STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI--- 172 ++ + ++AN ++ ++G L + L F ++N + F +T Sbjct: 122 SQSGLIGLNGPDASANGRPTYSTEQKSYTLTGDELR----VPLQFTDSNGVSFTKTYVFK 177 Query: 173 --SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 D +KI +T + Q+ + + N G G D+ Sbjct: 178 KGQYDVGLEYKINNTTSAPLQVQLYTQIKRTVQEKGSMVDQNYLGAAYG-----TDEEPY 232 Query: 231 EQ-KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 E+ +SD+ ++ N + ++ Y+ S ++P ++ + ++ + ++ +A A Sbjct: 233 EKYSFSDMADKNL-NKNTQGGYVAFIQHYFVSAWVPMQDQT-NTIYSLITKSNA---AII 287 Query: 290 SANE--ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 A + + I G T T + G KE + DL ++ +D+GW +FI++P+F Sbjct: 288 GAKDPAVNIQAGSEQTLTATYYMGPKESDILEAIHPDL-----DLTVDYGWLWFISQPLF 342 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +L+ + ++++GN+G+AI+ T+ VK L +PL K QY S A M+ +QPK+ L+EKF Sbjct: 343 VLLKWLHSILGNWGVAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMAALKEKFGDD- 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q +A +++YK +NP+ GC+PILLQ+P+F A++ V S E+RHA F W+ DL+A Sbjct: 402 RQKFGQATMEMYKKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFIFWLTDLSA 461 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVV 526 D P+Y + PI+ SMF+ K+ P D Q ++ +MPV+ Sbjct: 462 QD-----------PYY--------VLPILFGASMFVTQKLQPMTVTDPMQQKMMTFMPVI 502 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++YW SN+ISIVQ +I + Sbjct: 503 FSVFFLWFPSGLVLYWLVSNLISIVQMLIIYR 534 >gi|326571816|gb|EGE21822.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis BC7] Length = 547 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 173/315 (54%), Gaps = 28/315 (8%) Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ I Y+ S + PS SF + F + G+ Y +++ I + GK IT Sbjct: 250 NISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGNDFY-IGYNSPVINVASGKQIT 306 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+AG K + + L +D+G + I+K +F ++ ++GN+G + Sbjct: 307 LNSTLYAGPKVQSEMASVAEGL-----NQTVDYGLLWPISKVLFAILDNINKVIGNWGWS 361 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K + + M+QLY+ Sbjct: 362 IIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDDR-MAMSQEMMQLYRDEK 420 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A DP I Sbjct: 421 VNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDPWFIL--------- 471 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 PI M ++MF+Q ++P P D QA ++ +P++FV + FPAGL++YW+ Sbjct: 472 ----------PIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVFMLWFPAGLVLYWT 521 Query: 544 WSNVISIVQQAVIMK 558 +N+ S+ Q ++ K Sbjct: 522 VNNLFSMTHQHLVNK 536 >gi|317179626|dbj|BAJ57414.1| putative inner membrane protein translocase component YidC [Helicobacter pylori F30] Length = 546 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 94/233 (40%), Positives = 143/233 (61%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 319 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K I PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 379 KLKEIAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 438 YNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGASMYWHQSV 478 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 TPSSVTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 531 >gi|261840125|gb|ACX99890.1| putative inner membrane protein translocase component YidC [Helicobacter pylori 52] Length = 544 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 94/233 (40%), Positives = 143/233 (61%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 317 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 376 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K I PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 377 KLKEIAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 435 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 436 YNAVELKSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSV 476 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 477 TPNTMTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 529 >gi|317484430|ref|ZP_07943344.1| YidC/Oxa1 family membrane protein insertase [Bilophila wadsworthia 3_1_6] gi|316924318|gb|EFV45490.1| YidC/Oxa1 family membrane protein insertase [Bilophila wadsworthia 3_1_6] Length = 534 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 152/577 (26%), Positives = 261/577 (45%), Gaps = 87/577 (15%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL-- 65 F+AIAL++ ++ AW P E M IQ ++P + A + Sbjct: 7 FLAIALAIAVLLAWT-----PLAEHMGW----IQPQQRPAATQEATPAPAPAAQTAVAPA 57 Query: 66 --------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 S V+++ P I G L+ Y + ++SP V L+SP ++ Sbjct: 58 SSLPVFTPSAGTDVKVETPLYSAVIYSGGGILRSFTLKHYDETIKADSPKVNLISPEASQ 117 Query: 118 NAYFA-ELDYVSTANNIELPNSNTVWNLISGK--------ILTPTTPIKLVFKNANNILF 168 A ++ + + + + NL +G+ I+ +++ NA+N L Sbjct: 118 TAPLGLTVNGQPSWSTGQWSFQGSDLNLKAGEQGSLTFTGIVDGVRVTRVISFNADNYLL 177 Query: 169 ERTI---SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 I S D+ ++ TV ++ P A +F +E + L Sbjct: 178 SENILVGSADQAPRTVRLGFTVAATPFSNGKYDPT-----RLAWDANESFK-EETSASTL 231 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 +K ++EQ + W G+ Y+ +V P+ + K G Sbjct: 232 AEKGIIEQGVFN--------------WAGVMSNYFMNVTAPADPNNL--TLKGRVQGDVW 275 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 A + +T G + + G K+ + L+ +++G F IA+ Sbjct: 276 RLALERPDLLTPSNGGEVPVAVNWWFGPKDRTMLATAPDHLS-----QAVNFGMFSIIAR 330 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+ ++++F++ VGN+GIAI++ T ++++F+PL++K + S MK +QP + +LREK K Sbjct: 331 PLLTILAFFHSFVGNWGIAILMLTFCIRVVFWPLSQKSFKSMEQMKKLQPMMKKLREKHK 390 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF------ 458 + L K M+QLYKT+ +NP GC PI++QIPVF +Y+ + S+E+RHA F Sbjct: 391 DD-KEALNKEMMQLYKTYKVNPAGGCLPIVVQIPVFIGLYQALLNSIELRHASFIEYLPF 449 Query: 459 --WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 W+ DL+AAD PFY I P++M SMF+Q +++P D Q Sbjct: 450 THITWLADLSAAD-----------PFY--------ITPLLMGASMFLQQRLTPAAGDPTQ 490 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++ +MPV+F +FPAGL+IYW +N++SI QQ Sbjct: 491 QKVMMFMPVIFTVMFINFPAGLVIYWLCNNILSIGQQ 527 >gi|257461375|ref|ZP_05626471.1| inner membrane protein, 60 kDa [Campylobacter gracilis RM3268] gi|257441098|gb|EEV16245.1| inner membrane protein, 60 kDa [Campylobacter gracilis RM3268] Length = 547 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 116/330 (35%), Positives = 178/330 (53%), Gaps = 47/330 (14%) Query: 253 GISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI---------TILPGKSIT 303 GISDK AS F S+ S + DG + S I T+ G+S+ Sbjct: 226 GISDKI-ASFFTGSQAIS--ESVEIFKDGDVDKNERISGANIAASSDRYYTTLFYGESLN 282 Query: 304 TT-------NFLFAGAKEFPTIHHY--EKDLAI-----PRFEMLIDWGWFYFIAKPMFML 349 T + +F G+ ++ Y KD A P +I++GWF FIA+PMF Sbjct: 283 ATVTDADKISQVFIGSDGDLSLTGYIGAKDHATLSSINPALTHIIEYGWFTFIARPMFKF 342 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +++ + +GN+G +I++ T+ ++L+ FPL+ K +S +K++ PK+ EL+EK+K Q Sbjct: 343 LNWLHGYIGNWGWSIVVLTLIIRLILFPLSYKGMLSMNKLKDLAPKMKELQEKYKDD-KQ 401 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 LQ M+ LYK + NP+ GC PILLQIPVFFAIY+V+ ++E++ A + WI DL+ D Sbjct: 402 KLQMHMMDLYKKNGANPMGGCLPILLQIPVFFAIYRVLLNAIELKGAEWALWIHDLSLKD 461 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P+Y I PI M + MF+Q K++P D Q ++ ++P++F Sbjct: 462 -----------PYY--------ILPITMGILMFLQQKITPTTFTDPMQEKMMKFLPLIFT 502 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL +YW+ +N SI+QQ VI K Sbjct: 503 VFFVMFPAGLTLYWTVNNFCSIIQQYVINK 532 >gi|297380697|gb|ADI35584.1| inner membrane protein translocase component YidC [Helicobacter pylori v225d] Length = 546 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 94/233 (40%), Positives = 143/233 (61%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 319 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K I PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 379 KLKEIAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 438 YNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGASMYWHQSV 478 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 TPSSVTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 531 >gi|308064207|gb|ADO06094.1| putative inner membrane protein translocase component YidC [Helicobacter pylori Sat464] Length = 547 Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 93/233 (39%), Positives = 143/233 (61%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 320 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 379 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K I PK+ EL+EK+K P Q LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 380 KLKEIAPKMKELQEKYKDEP-QKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 438 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 439 YNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGASMYWHQSV 479 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA + ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 480 TPSSVTDPMQAKLFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 532 >gi|261838725|gb|ACX98491.1| inner membrane protein [Helicobacter pylori 51] Length = 546 Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 94/233 (40%), Positives = 143/233 (61%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 319 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K I PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 379 KLKEIAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 438 YNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGASMYWHQSV 478 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 TPSSVTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 531 >gi|256830920|ref|YP_003159648.1| 60 kDa inner membrane insertion protein [Desulfomicrobium baculatum DSM 4028] gi|256580096|gb|ACU91232.1| 60 kDa inner membrane insertion protein [Desulfomicrobium baculatum DSM 4028] Length = 534 Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 157/569 (27%), Positives = 269/569 (47%), Gaps = 95/569 (16%) Query: 25 YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVE----------LK 74 Y++P + +N+ PNQ AA D AQ + SP V+ + Sbjct: 23 YIFPPAPPLETAPQNLSA---PNQT----AAPASQDAAQVMPSSPTVQFIPSKGEKLSVD 75 Query: 75 NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA----------YFAEL 124 P IN G + L+ Y + S + L++ + A +A+ Sbjct: 76 TPLYRAVINSSGGVLESFELKEYKETIDPGSKNIDLVTAQSVTKAPMGLIWNSLPTWAQG 135 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIV 183 ++ +++L + +SG + + +R ++ Y K Sbjct: 136 EWTVQGGDLDLAAGQSGTIQLSGVV--------------GGVQMDRVLTFTGGTYEVKEE 181 Query: 184 DTVTNNSIDQIRFSPRGRI---MRHKPQTA-TNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 VTN + Q++ G + + P TA ++ + + + IA + SL E+ + Sbjct: 182 VKVTNVTAAQVQ----GHLAFSVSSVPLTAESDKYNMTK--IAYMAAGSLTEEDSQKDLQ 235 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + + + W GI Y+ +P+ F L D R A+++ + PG Sbjct: 236 IGVESTAPAQ-WGGIESNYFLLAMVPTSSDMFAR--AKLEDNVYRMTV---ADQVLLDPG 289 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI-PR-FEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 + T + G K EKDL++ P+ + + +G+F+ IA+P+ +++ Y V Sbjct: 290 ITQLRTVSYYFGPKT-------EKDLSLMPKDLKGSMHYGFFHIIAQPLNQFLNFLYGYV 342 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+GIAI++ T+ +KLLF+PL+ K Y S MK +QP + ++REK+ + + ++Q Sbjct: 343 GNYGIAIIILTIIIKLLFWPLSHKSYKSMEQMKKLQPMMAKIREKYADDR-EKMNSEIMQ 401 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF--------WGWIKDLAAAD 469 LYKT+ +NP GC P+LLQIPVFFA+Y+ + ++E+RHA F W+ DL+A D Sbjct: 402 LYKTYKVNPAGGCVPMLLQIPVFFALYQALLGAIELRHAAFIPTLPFTDLVWLADLSAKD 461 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P +Y I P+IM +MF+Q ++SPP D QA I+ +MPV+F F Sbjct: 462 P-----------YY--------ITPLIMGATMFLQQRLSPPMGDPMQAKIMMFMPVIFTF 502 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +FP+GL++YW +NV+SI QQ+ ++K Sbjct: 503 LFLNFPSGLVVYWLVNNVLSIAQQSYMIK 531 >gi|326573504|gb|EGE23470.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis O35E] Length = 547 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 172/315 (54%), Gaps = 28/315 (8%) Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ I Y+ S + PS SF + F + G Y +++ I + GK IT Sbjct: 250 NISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGKDFYIG-YNSPVINVASGKQIT 306 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+AG K + + L +D+G + I+K +F ++ ++GN+G + Sbjct: 307 LNSTLYAGPKVQSEMASVAEGL-----NQTVDYGLLWPISKVLFAILDNINKVIGNWGWS 361 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K + + M+QLY+ Sbjct: 362 IIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDDR-MAMSQEMMQLYRDEK 420 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A DP I Sbjct: 421 VNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDPWFIL--------- 471 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 PI M ++MF+Q ++P P D QA ++ +P++FV + FPAGL++YW+ Sbjct: 472 ----------PIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVFMLWFPAGLVLYWT 521 Query: 544 WSNVISIVQQAVIMK 558 +N+ S+ Q ++ K Sbjct: 522 VNNLFSMTHQHLVNK 536 >gi|157737856|ref|YP_001490540.1| putative inner membrane protein translocase component YidC [Arcobacter butzleri RM4018] gi|157699710|gb|ABV67870.1| inner membrane protein, 60 kDa [Arcobacter butzleri RM4018] Length = 533 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 147/498 (29%), Positives = 241/498 (48%), Gaps = 82/498 (16%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHL-DVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 +E+ N + + L ++ D N L + + P+ + N F +++ V + Sbjct: 98 IEIDNLGRVAQVTLTEEKYKDENGAQIKLFEANQLKPLEVRFADININEEAF-KVNVVPS 156 Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNN 189 ++NI+ + L+ + LT T K + TI D HY D ++ Sbjct: 157 SSNIDATQNKQ--ELVLTQTLTNTVLTK-----------KFTIYPDGHY-----DLTVSS 198 Query: 190 SIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL--VEQKYSDIEKSSISNFHE 247 + D+ F G +P + + V GFI L D SL +E S ++ + + Sbjct: 199 TNDKPFFVSNG----FRPNVLVDMYAVH-GFITKLNDNSLTTIEDGSSKKNETFVGSKFV 253 Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 SN D+Y+A+V I + E S ++T++P S +F Sbjct: 254 SNF-----DRYYATV-IYNFEKSL---------------------QVTVMPDSSNNPQSF 286 Query: 308 LFA-GAKEF-----PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 + + G F P H + L P +ID+GWF FIAKPMF+L+ + + +GN+G Sbjct: 287 IHSSGDISFSGYMGPKNHRVLESLN-PELIDVIDYGWFTFIAKPMFVLLQFLQSYIGNWG 345 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 I+ T+ VK++ +PL+ K VS +K++ PK+ E++ K+K Q M++LYK Sbjct: 346 WTIVALTILVKVVLYPLSYKGMVSMQKLKDLAPKMKEIQLKYKDD-KQKQSMHMMELYKK 404 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 H NP+ GC P++LQIP+FFAIY+V+ ++E++ A + WI DLAA D P Sbjct: 405 HGANPMGGCLPLILQIPIFFAIYRVLINAIELKGAEWIFWIHDLAAMD-----------P 453 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLII 540 F+ + PI+M +M+IQ +++P D+ Q I +P+VF F FPAGL + Sbjct: 454 FF--------VLPILMGATMYIQQRITPTTVQDELQKKIFQLLPIVFTFFFLWFPAGLTL 505 Query: 541 YWSWSNVISIVQQAVIMK 558 YW +N+ +I QQ VI K Sbjct: 506 YWFVNNLFTIGQQYVINK 523 >gi|326571729|gb|EGE21742.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis BC8] gi|326574357|gb|EGE24300.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis CO72] Length = 547 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 172/315 (54%), Gaps = 28/315 (8%) Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ I Y+ S + PS SF + F + G Y +++ I + GK IT Sbjct: 250 NISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGKDFYIG-YNSPVINVASGKQIT 306 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+AG K + + L +D+G + I+K +F ++ ++GN+G + Sbjct: 307 LNSTLYAGPKVQSEMASVAEGL-----NQTVDYGLLWPISKVLFAILDNINKVIGNWGWS 361 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K + + M+QLY+ Sbjct: 362 IIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDDR-MAMSQEMMQLYRDEK 420 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A DP I Sbjct: 421 VNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDPWFIL--------- 471 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 PI M ++MF+Q ++P P D QA ++ +P++FV + FPAGL++YW+ Sbjct: 472 ----------PIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVFMLWFPAGLVLYWT 521 Query: 544 WSNVISIVQQAVIMK 558 +N+ S+ Q ++ K Sbjct: 522 VNNLFSMTHQHLVNK 536 >gi|326561739|gb|EGE12074.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis 7169] gi|326569040|gb|EGE19109.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis BC1] Length = 547 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 172/315 (54%), Gaps = 28/315 (8%) Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ I Y+ S + PS SF + F + G Y +++ I + GK IT Sbjct: 250 NISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGKDFYIG-YNSPVINVASGKQIT 306 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+AG K + + L +D+G + I+K +F ++ ++GN+G + Sbjct: 307 LNSTLYAGPKVQSEMASVAEGL-----NQTVDYGLLWPISKVLFAILDNINKVIGNWGWS 361 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K + + M+QLY+ Sbjct: 362 IIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDDR-MAMSQEMMQLYRDEK 420 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A DP I Sbjct: 421 VNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWIADLSAMDPWFIL--------- 471 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 PI M ++MF+Q ++P P D QA ++ +P++FV + FPAGL++YW+ Sbjct: 472 ----------PIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVFMLWFPAGLVLYWT 521 Query: 544 WSNVISIVQQAVIMK 558 +N+ S+ Q ++ K Sbjct: 522 VNNLFSMTHQHLVNK 536 >gi|326560696|gb|EGE11064.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis 46P47B1] Length = 557 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 172/315 (54%), Gaps = 28/315 (8%) Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ I Y+ S + PS SF + F + G Y +++ I + GK IT Sbjct: 260 NISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGKDFYIG-YNSPVINVASGKQIT 316 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+AG K + + L +D+G + I+K +F ++ ++GN+G + Sbjct: 317 LNSTLYAGPKVQSEMASVAEGL-----NQTVDYGLLWPISKVLFAILDNINKVIGNWGWS 371 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K + + M+QLY+ Sbjct: 372 IIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDDR-MAMSQEMMQLYRDEK 430 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A DP I Sbjct: 431 VNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDPWFIL--------- 481 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 PI M ++MF+Q ++P P D QA ++ +P++FV + FPAGL++YW+ Sbjct: 482 ----------PIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVFMLWFPAGLVLYWT 531 Query: 544 WSNVISIVQQAVIMK 558 +N+ S+ Q ++ K Sbjct: 532 VNNLFSMTHQHLVNK 546 >gi|326563097|gb|EGE13370.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis 12P80B1] Length = 557 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 172/315 (54%), Gaps = 28/315 (8%) Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ I Y+ S + PS SF + F + G Y +++ I + GK IT Sbjct: 260 NISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGKDFYIG-YNSPVINVASGKQIT 316 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+AG K + + L +D+G + I+K +F ++ ++GN+G + Sbjct: 317 LNSTLYAGPKVQSEMASVAEGL-----NQAVDYGLLWPISKVLFAILDNINKVIGNWGWS 371 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K + + M+QLY+ Sbjct: 372 IIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDDR-MAMSQEMMQLYRDEK 430 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A DP I Sbjct: 431 VNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDPWFIL--------- 481 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 PI M ++MF+Q ++P P D QA ++ +P++FV + FPAGL++YW+ Sbjct: 482 ----------PIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVFMLWFPAGLVLYWT 531 Query: 544 WSNVISIVQQAVIMK 558 +N+ S+ Q ++ K Sbjct: 532 VNNLFSMTHQHLVNK 546 >gi|308062713|gb|ADO04601.1| putative inner membrane protein translocase component YidC [Helicobacter pylori Cuz20] Length = 547 Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 93/234 (39%), Positives = 144/234 (61%), Gaps = 21/234 (8%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 +P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 319 LPMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSM 378 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 +K I PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V Sbjct: 379 QKLKEIAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRV 437 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + ++E++ + + WI DL+ DP I P++M SM+ Sbjct: 438 LYNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGASMYWHQS 478 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++P D QA + ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 VTPSSVTDPMQAKLFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQFIINKV 532 >gi|188528220|ref|YP_001910907.1| putative inner membrane protein translocase component YidC [Helicobacter pylori Shi470] gi|188144460|gb|ACD48877.1| putative inner membrane protein translocase component YidC [Helicobacter pylori Shi470] Length = 546 Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 93/233 (39%), Positives = 143/233 (61%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 319 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K I PK+ EL+EK+K P Q LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 379 KLKEIAPKMKELQEKYKDEP-QKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 438 YNAVELKSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSV 478 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA + ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 TPSSVTDPMQAKLFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 531 >gi|205356681|ref|ZP_03223442.1| putative membrane protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345419|gb|EDZ32061.1| putative membrane protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 403 Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 121/370 (32%), Positives = 194/370 (52%), Gaps = 62/370 (16%) Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHESNSWLGISDKYWASVF 263 ++P A +++ V V+ +K +E K D+EK +N S D+Y+A+ F Sbjct: 75 YRPNIAVDSYTVHGAL--VMDNKETIETYKDGDVEKDESANNVVMTSAF---DRYYATFF 129 Query: 264 IP---------SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE 314 SK+T+ + SD + + E IL +SI Sbjct: 130 YNFDKPLNVAISKDTNQNPIVFAYSDNEFKAGGYIGSKEHVIL--RSID----------- 176 Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374 PR E ++++GWF FIAKPMF +++ + + N+G AI++ T+ V+++ Sbjct: 177 -------------PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIENWGWAIVVMTLIVRII 223 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 FPL K +S +K++ PK+ ++RE++K PQ + M++LYK H NP++GC PIL Sbjct: 224 LFPLTYKSMISMNKLKDLAPKMKDIRERYK-GDPQKMNMHMMELYKKHGANPMSGCLPIL 282 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 LQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP I P Sbjct: 283 LQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFIL-------------------P 323 Query: 495 IIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 I+M +MF+Q ++P D QA I+ ++PV+F F +FPAGL +YW +N+ S+VQQ Sbjct: 324 ILMGATMFLQQLITPITIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQ 383 Query: 554 AVIMKMHGAE 563 VI K+ E Sbjct: 384 WVINKIFVKE 393 >gi|116620215|ref|YP_822371.1| protein translocase subunit yidC [Candidatus Solibacter usitatus Ellin6076] gi|116223377|gb|ABJ82086.1| protein translocase subunit yidC [Candidatus Solibacter usitatus Ellin6076] Length = 579 Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 117/364 (32%), Positives = 185/364 (50%), Gaps = 57/364 (15%) Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 T TN Q L LVEQ K I++ + S+ GI+D Y+A+VF+P Sbjct: 229 TLTNAAAGQRTLYFDLTTNKLVEQNPKAAAKGPITS-EGTFSFAGIADTYFAAVFLP--- 284 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEI------TILPGKSITTTNF------LFAGAKEFP 316 +G+ R Q A+ + T LP + + LF G K+ Sbjct: 285 -----------EGNGRMQQVTFADTVRTPTSETPLPLSGVAVGDGPPIRFELFVGPKDVD 333 Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLF 375 + P+ E ++D+GW +AKP+F++++Y + LV NFG AI+L T+ + + Sbjct: 334 MLRKIN-----PKLEQVVDFGWLSVLAKPLFLIVNYVNDTLVHNFGWAIVLVTIAINFIL 388 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQ---SPPQVLQK--AMIQLYKTHNINPLAGC 430 FPL S M+ ++P++D + K+K P+ K + LYK H +NP+ GC Sbjct: 389 FPLKLSNMKSMRKMQALKPQVDAINAKYKNVGLRDPRAADKNQETMDLYKKHGVNPMGGC 448 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 P++LQIP FFA YKV ++S+EMR AP W W+ DL+ P + + Sbjct: 449 LPMVLQIPFFFAFYKVFTVSVEMRGAP-WLWVSDLSQ-----------------PETLPI 490 Query: 491 GIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 I P++M S F+ +M+P PA D Q ++ +MP+VF F +FP+GL++Y+ SN++S Sbjct: 491 KILPLVMIASQFVMQRMTPQPAGDPAQQKMMMFMPLVFGFMFYNFPSGLVLYYLTSNLVS 550 Query: 550 IVQQ 553 + QQ Sbjct: 551 MGQQ 554 >gi|118603000|ref|YP_904215.1| protein translocase subunit yidC [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166977411|sp|A1AXT7|OXAA_RUTMC RecName: Full=Inner membrane protein oxaA gi|118567939|gb|ABL02744.1| protein translocase subunit yidC [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 541 Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 107/310 (34%), Positives = 174/310 (56%), Gaps = 30/310 (9%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT-TNFL 308 W+ + + Y+ IP H+ + +G Y E+ I PG +T ++ L Sbjct: 257 GWIAMIEHYFFVAAIPDVN-QIHTYSSKIING--EYLLTVVNPELVIAPGAIVTLPSSSL 313 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + G KE I++ P + +D+G + IAKP+ L+++ Y+++ ++G +I+ T Sbjct: 314 YIGPKEQKQINN-----VAPGLDKTVDYGVLFIIAKPLSELLNWIYSIIHSWGYSIITLT 368 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KL F+ L++K Y S A M+ + P++ +L+E + ++ QK M +LYK INP + Sbjct: 369 LLIKLAFYKLSEKSYRSMAGMRQLAPRLTKLKETYGDDKQKLGQKTM-ELYKKEKINPAS 427 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC PIL+QIPVF ++Y V+ +E+R APFW ++ DL+A DP +Y Sbjct: 428 GCLPILVQIPVFISLYWVLLEMVELRQAPFW-YLTDLSAQDP-----------YY----- 470 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I P+IM +SMF Q K++PPP D QA I+ +P VF FP+GL++YW +N++ Sbjct: 471 ---ILPLIMGVSMFAQQKLNPPPPDPMQAKIMMALPFVFTIFFLWFPSGLVLYWVVNNIL 527 Query: 549 SIVQQAVIMK 558 SI QQ VI K Sbjct: 528 SITQQWVINK 537 >gi|268680016|ref|YP_003304447.1| membrane protein insertase, YidC/Oxa1 family [Sulfurospirillum deleyianum DSM 6946] gi|268618047|gb|ACZ12412.1| membrane protein insertase, YidC/Oxa1 family [Sulfurospirillum deleyianum DSM 6946] Length = 532 Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 100/281 (35%), Positives = 157/281 (55%), Gaps = 36/281 (12%) Query: 290 SANEITILPGKSITTTNFL----------FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 S E ILP K F+ + G KE+ + P ++++G+F Sbjct: 265 SGLETVILPSKESNPLLFVKGNDDFKLSGYVGPKEYVKLKEIH-----PGLTDVVEYGFF 319 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 FIAKP+F L+S+ + + GN+G AI+ T+ V+L+ +PL K VS +K + PK+ EL Sbjct: 320 TFIAKPLFTLLSFLHGIFGNWGWAIVAMTIIVRLVLYPLTYKGMVSMNKLKELAPKVKEL 379 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 ++K+ Q L M++LYK H NP+ GC PILLQIPVFFA+Y+V+ ++E++ A + Sbjct: 380 QKKYGDDK-QKLNIHMMELYKKHGANPMGGCLPILLQIPVFFAVYRVLQNAIELKGAAWI 438 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAM 518 W++DLA DP Y I P++M L+MF+ +++P D Q Sbjct: 439 LWVQDLAVMDP------------YF-------ILPVLMGLTMFLHQRITPTTFNDPMQEK 479 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 I+ ++P++F F +FPAGL +YW +N+ SIVQQ + K+ Sbjct: 480 IMKYLPLIFTFFFVTFPAGLTLYWFTNNLASIVQQFYVNKL 520 >gi|308183546|ref|YP_003927673.1| putative inner membrane protein translocase component YidC [Helicobacter pylori PeCan4] gi|308065731|gb|ADO07623.1| putative inner membrane protein translocase component YidC [Helicobacter pylori PeCan4] Length = 548 Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 93/233 (39%), Positives = 142/233 (60%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 321 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 380 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 381 KLKELAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 439 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 440 YNAVELKSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSV 480 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 481 TPNTMTDPMQAKIFKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 533 >gi|171911028|ref|ZP_02926498.1| 60 kDa inner membrane insertion protein [Verrucomicrobium spinosum DSM 4136] Length = 618 Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 112/354 (31%), Positives = 184/354 (51%), Gaps = 18/354 (5%) Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI-SNFHES--NSWLGISDKYWASVF-IP 265 AT +F GF+ G +++ + + + S F+ + ++ I K WA+ F I Sbjct: 223 ATGSFRDGAGFLGFGGPVVELQKNFQHLRWGGVMSRFYTTLISTKTDIPAKTWATRFLID 282 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 F K L D I + P S + ++ GAK F + + Sbjct: 283 HSNDEFKDHKKALQD--YAIHGGVGLPTIELEPNASTSVDYRIYIGAKIFHDLKKIDVAE 340 Query: 326 AIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 P +M ++ +GWF F+++ + L+ +F++L GN+G+AI+L T+ V+ L +P+ + Sbjct: 341 GQPNRQMQYVMFYGWFTFVSRGLVFLLRWFHDLTGNWGVAIVLLTITVRSLLWPVQARSN 400 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + M + PKI EL+EK K P Q + M+++Y+ + +NPL GC P+L+QIP+FF Sbjct: 401 ATMKRMGLLAPKIKELQEKHKDDP-QKVNTEMMRMYREYGVNPLGGCLPLLVQIPIFFGF 459 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y V+ + E+R PF+GWI+DL+ D L G + + P++M L+MF+ Sbjct: 460 YSVLRYAAELRGQPFFGWIQDLSLPDTVTTLHLLGY-------HLPLNPLPLLMGLTMFL 512 Query: 504 QMKMSPPP--ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 QMK++P P ADK Q I MP +F+F SF + L +YW+ N+ SI Q V Sbjct: 513 QMKLTPQPASADKTQQRIFMLMPFMFLFFCYSFASALALYWTVQNIYSIFQAQV 566 >gi|332995877|gb|AEF05932.1| inner membrane protein, 60 kDa [Alteromonas sp. SN2] Length = 550 Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 146/565 (25%), Positives = 263/565 (46%), Gaps = 47/565 (8%) Query: 8 FVAIALSVIIVYAWQNF---YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR--- 61 F+ I L+++ WQ + Y ++++ E+ + P+ D V D Sbjct: 7 FLIIGLALVSFLLWQQWQKEYGPQPVQQVQTEQAEQVSQGVPSFDDAQSEDVPTGDSVPA 66 Query: 62 ----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A A + + +E+K L I+L G +L + + S P +LL N Sbjct: 67 AKPMASASNANRIIEVKTDGLDLRIDLLGGDVITADLLKFPVTQGSEEP-YSLLRSGN-- 123 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVFKNANNILFERT-ISL 174 N Y A+ + + V+ S ++ T + LV+KN + +T I Sbjct: 124 NLYVAQSGLIGANGPDASSSGRPVYRTDSNFYEMTGDTLEVPLVWKNDQGLTVTKTFIFK 183 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 +HY + TV NNS ++ + + A + QKY Sbjct: 184 KDHYNVAVNYTVQNNSGAAANVQQYAQLKQVIDAEDDGNMFMPTYRGAAYSTEEDRYQKY 243 Query: 235 S--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + DI + ++ W G+ + Y+ S ++P ++ + +S+ +A A Sbjct: 244 TFDDIADDKLRETTKAG-WAGMLEHYFVSAWVPPQDQVNTIYSRNISNQYAVIGVLMPAA 302 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + K++++T L+ G K+ + + L ++ +D+G ++I++ +F L+++ Sbjct: 303 VVNTGEAKTLSST--LYMGPKDQDKLKEIARGL-----DLTVDYGILWWISQSLFSLLTF 355 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++LV N+G+AI+L T+ VK + L KKQY S A M+N+ PK+ +L+++F Q + Sbjct: 356 LHSLVNNWGVAIILITIVVKGAMYWLTKKQYESMARMRNLAPKMQQLKDRFGDDR-QKMS 414 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 ++M++LYK +NP+ GC P++LQ+P+F A+Y V+ S+E+RHA F WI DL+ DP Sbjct: 415 QSMMELYKKEKVNPMGGCLPLVLQMPIFLALYWVLMESVELRHADFALWITDLSVKDPYF 474 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 + PI+ SM++ K+ P D Q I+ +MPV Sbjct: 475 VL-------------------PILTGASMYLLQKLQPTTITDPMQQKIMQFMPVAMSVFF 515 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 FPAGL++YW SN+I++VQ +I Sbjct: 516 LWFPAGLVLYWLVSNIITLVQAKMI 540 >gi|218515055|ref|ZP_03511895.1| putative inner membrane protein translocase component YidC [Rhizobium etli 8C-3] Length = 162 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 79/134 (58%), Positives = 105/134 (78%), Gaps = 1/134 (0%) Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 NMK +QPK++EL+ KF LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI Sbjct: 1 NMKRMQPKMEELKAKFGDDR-MGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVI 59 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 I++EMRHAPF+GWI+DL+A DPT I LFG+LPF P F+H+G+WP+IM ++MF+QM+M Sbjct: 60 YITIEMRHAPFFGWIQDLSAPDPTTIVNLFGLLPFTAPTFLHLGVWPLIMGVTMFLQMRM 119 Query: 508 SPPPADKGQAMILN 521 +P P D QAMI Sbjct: 120 NPTPPDPTQAMIFK 133 >gi|315128186|ref|YP_004070189.1| preprotein translocase; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase [Pseudoalteromonas sp. SM9913] gi|315016699|gb|ADT70037.1| preprotein translocase; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase [Pseudoalteromonas sp. SM9913] Length = 544 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 147/571 (25%), Positives = 269/571 (47%), Gaps = 55/571 (9%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +R + + + +S ++ W N Y P+ + QT+K + + Y D Sbjct: 4 QRTFLFIGLMLVSFLLFQEWNNDYNTPKADP----SATTQTLKANSPESDDYVPASSDSG 59 Query: 62 AQA---LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A L+ +++ I+ KG + +L Y S+ P + LL + K Sbjct: 60 LPASTTLAKRSVIDITTDVFKVKIDTKGGDIVETDLINYKETKGSDVPYM-LLGEFDGKQ 118 Query: 119 AYFAELDYV------STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 YF++ + ++AN S ++G L + L F ++N + F +T Sbjct: 119 -YFSQSGLIGLNGPDASANGRPTYQSEQTSYTLTGDELR----VPLQFTDSNGVSFTKTY 173 Query: 173 SLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI-AVLGDKSLV 230 + Y + V N + ++ +I R + + V + ++ A G Sbjct: 174 VFKKGQYDVGLEYKVNNTTSAPVQVQLYTQIKRTVQEKGSM---VDQNYLGAAYGTDEEP 230 Query: 231 EQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 +KYS D+ ++ N + ++ Y+ S ++P ++ + ++ + ++ +A Sbjct: 231 YEKYSFSDMADKNL-NINTQGGYVAFIQHYFVSAWVPMQDQA-NTLYSLITKSNAAIIG- 287 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + + G T + G KE + DL ++ +D+GW +FI++P+F+ Sbjct: 288 VKDEAVNVQAGSEQVLTATYYMGPKESDKLEAIHTDL-----DLTVDYGWLWFISQPLFV 342 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + ++++GN+G+AI+ T+ VK L +PL K QY S A M+ +QPK+ L+EK+ Sbjct: 343 LLKWLHSILGNWGVAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMKALKEKYGDD-R 401 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q +A +++Y+ +NP+ GC+PILLQ+P+F A++ V S E+RHA F W+ DL+A Sbjct: 402 QKFGQATMEMYRKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFVLWLTDLSAK 461 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVF 527 D P+Y + PI+ SMFI K+ P D Q ++ +MPV+F Sbjct: 462 D-----------PYY--------VLPILFGASMFITQKLQPMTVTDPMQQKMMTFMPVIF 502 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++YW SN+ISIVQ +I + Sbjct: 503 SVFFLWFPSGLVLYWLVSNLISIVQMLIIYR 533 >gi|254457731|ref|ZP_05071159.1| 60 kDa inner membrane insertion protein [Campylobacterales bacterium GD 1] gi|207086523|gb|EDZ63807.1| 60 kDa inner membrane insertion protein [Campylobacterales bacterium GD 1] Length = 541 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 92/249 (36%), Positives = 148/249 (59%), Gaps = 26/249 (10%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + G KE+ + + P I++GWF F +KP+F L+S+ + + GN+G +I+ T Sbjct: 286 YVGQKEYKVLKNIN-----PVLTNAIEYGWFTFASKPLFQLLSWLHGIFGNWGWSIIALT 340 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + ++ + +PL K +S MK+I PKI EL+ K+K S PQ + A++ +YK HN NPL Sbjct: 341 IMIRAVLYPLTYKGMMSMQRMKDISPKIKELQAKYK-SDPQRMNAAVMDMYKKHNANPLG 399 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P++LQIPVFFAIY+V+ ++E++ AP+ W+ DL+ D +Y Sbjct: 400 GCLPMILQIPVFFAIYRVLLNAVELQGAPWMLWVTDLSRMD-----------DYY----- 443 Query: 489 HVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 I PI+M SMF Q +++P D Q + ++PV+F F +FP+GL++YW +N+ Sbjct: 444 ---ILPILMGASMFYQQRLTPNNFTDPMQEKVFKYLPVIFTFFFLTFPSGLVLYWFVNNL 500 Query: 548 ISIVQQAVI 556 SI QQ ++ Sbjct: 501 FSIGQQFIV 509 >gi|224418480|ref|ZP_03656486.1| putative inner membrane protein translocase component YidC [Helicobacter canadensis MIT 98-5491] gi|253827793|ref|ZP_04870678.1| putative inner membrane protein translocase component YidC [Helicobacter canadensis MIT 98-5491] gi|313142010|ref|ZP_07804203.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253511199|gb|EES89858.1| putative inner membrane protein translocase component YidC [Helicobacter canadensis MIT 98-5491] gi|313131041|gb|EFR48658.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 536 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 143/488 (29%), Positives = 237/488 (48%), Gaps = 74/488 (15%) Query: 79 IGSINLKGAQF--DDLNLRGYHLDVSS--NSPIVTLLSPSNTKNAYFAELDYVSTANNIE 134 I + LK ++ D NL + D+++ N I+ + + N Y ++A NIE Sbjct: 95 ITQVTLKEEKYHKDAKNLELFSNDIANQNNPKILEIRFADSMLNQQAFNTPYQTSATNIE 154 Query: 135 L---PNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSI 191 L P S T+ + LT T N L+E + + ++Y + I Sbjct: 155 LKDKPQSLTLTQKLENFTLTKTITFH------PNGLYEVKVEIPQNYTYFI--------- 199 Query: 192 DQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251 SP R +A N V +G I D ++ D + S SNF S S Sbjct: 200 -----SPGMR------PSAENDSYVFKGVIIKEQDGTIT--TIEDGDSSGQSNFTNS-SI 245 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 L D+Y+ ++F S+ + ++ LS+ SAN L G + G Sbjct: 246 LAAVDRYYTTLFF-SQSNNLNAIV--LSNAEENPMPFLSANGNIELSG---------YIG 293 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 K++ + P ++++G F AKP+F+L+ Y+ GN+G AI+L T+ V Sbjct: 294 PKDYRLLESIN-----PNLTEVVEYGIITFFAKPLFLLLETLYDWCGNWGWAIILLTLIV 348 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 +++ +PL K VS +K + PK+ E+++K+K PQ LQ M++LYK H NP+ GC Sbjct: 349 RVVLYPLTYKGMVSMQKLKELAPKMKEIQQKYK-GEPQKLQVHMMELYKKHGANPMGGCL 407 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 P+LLQ+PVFFAIY+V+ ++E++ A + WI+DL+ DP Y Sbjct: 408 PLLLQMPVFFAIYRVLYNAIELKGAAWLLWIQDLSVMDP------------YF------- 448 Query: 492 IWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 + PI+M ++M++Q ++P D Q I ++P++F +FP+GL++YW +N+ SI Sbjct: 449 VLPILMGITMYLQQHLTPTTFNDPIQEKIFKFLPLIFTIFFVTFPSGLVLYWFVNNIFSI 508 Query: 551 VQQAVIMK 558 +QQ +I K Sbjct: 509 LQQLLINK 516 >gi|237750081|ref|ZP_04580561.1| inner-membrane protein [Helicobacter bilis ATCC 43879] gi|229374268|gb|EEO24659.1| inner-membrane protein [Helicobacter bilis ATCC 43879] Length = 577 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 92/233 (39%), Positives = 145/233 (62%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P ++++G F AK +F L+ + Y +GN+G+AI++ T+ ++++ FPL+ K V Sbjct: 340 PHLTSVVEYGRITFFAKYIFALLDFLYQYIGNWGVAIIVLTIIIRIILFPLSFKGMVGMQ 399 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ +L+ K+K PQ LQ +M++LYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 400 KLKELAPKMKDLQAKYK-GDPQKLQASMMELYKKHGANPLGGCLPLVLQIPVFFAIYRVL 458 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E+++AP WI DL+ DP Y + P++M SM++Q + Sbjct: 459 YNAVELKNAPLMWWIHDLSVMDP------------YF-------VLPLLMGFSMYLQQAL 499 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D Q + W+PV+F F L +FPAGLI+YW+ +N+ISI+QQ I KM Sbjct: 500 TPTTFTDPMQEKVFKWLPVIFTFFLITFPAGLILYWTINNLISIIQQLAINKM 552 >gi|29655205|ref|NP_820897.1| inner membrane protein oxaA [Coxiella burnetii RSA 493] gi|161830140|ref|YP_001597736.1| inner membrane protein oxaA [Coxiella burnetii RSA 331] gi|30581048|sp|P45650|OXAA_COXBU RecName: Full=Inner membrane protein oxaA gi|189036348|sp|A9NBA5|OXAA_COXBR RecName: Full=Inner membrane protein oxaA gi|29542477|gb|AAO91411.1| 60 kDa inner membrane protein [Coxiella burnetii RSA 493] gi|161762007|gb|ABX77649.1| Inner membrane protein oxaA [Coxiella burnetii RSA 331] Length = 566 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 127/411 (30%), Positives = 208/411 (50%), Gaps = 32/411 (7%) Query: 156 IKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 ++L + + +L +T + + Y + V NN+ + S +I R +P T + F Sbjct: 165 VQLTGRAPDGLLVTKTYTFHRDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHF 224 Query: 215 GVQEGFIAVLGDKSLVEQK--YSDIEKSSISNFHESNSWLGISDKYWASVFIPSK-ETSF 271 V+ A +G +K Y ++K +I +S W+ + Y+ S ++P E ++ Sbjct: 225 YVRSYNGASMGSPQTPYEKLSYESLDKQNIDRTSQSG-WIAMQQHYFLSAWVPGNPELTY 283 Query: 272 H--SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 H S SD Y F + ++ + G T L+ G P I K LA P Sbjct: 284 HYYSHVIPASDEPNVYVVGFVSPQMNVAAGSEAATHATLYVG----PEIAKRLKGLA-PG 338 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E ID+GW + I+ +F ++S + +V N+G +I++TT+ +K++F+ + K + S A M Sbjct: 339 LERTIDYGWLWPISMLLFWILSAVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARM 398 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L+E+ Q L +A ++LY+ INPL GC P+L+Q+PVF A Y VI Sbjct: 399 REMQPRIQALKERHGDDR-QALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIE 457 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+++R APF WI DL+ DP I PIIM LSM Q +SP Sbjct: 458 SVQLRQAPFIFWIHDLSVKDPYYIL-------------------PIIMGLSMLAQQWVSP 498 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 D Q ++ +PV+F +FPAGL++YW +NV+ +QQ + K + Sbjct: 499 TSPDPTQQKMMWILPVIFTVFFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549 >gi|208435316|ref|YP_002266982.1| 60 kDa inner-membrane protein [Helicobacter pylori G27] gi|208433245|gb|ACI28116.1| 60 kDa inner-membrane protein [Helicobacter pylori G27] Length = 548 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 93/233 (39%), Positives = 142/233 (60%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 321 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 380 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 381 KLKELAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 439 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 440 YNAVELKSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSV 480 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 481 TPNTMTDPMQAKIFKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKI 533 >gi|329908682|ref|ZP_08274922.1| OxaI/YidC membrane insertion protein [Oxalobacteraceae bacterium IMCC9480] gi|327546632|gb|EGF31596.1| OxaI/YidC membrane insertion protein [Oxalobacteraceae bacterium IMCC9480] Length = 198 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 93/209 (44%), Positives = 136/209 (65%), Gaps = 20/209 (9%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M+ + ++GN+G I++ T+ +KL FFPL+ Y S A MK + PK+ +RE+FK S PQ Sbjct: 1 MTQIHKILGNWGWTIIVLTMLIKLAFFPLSAASYRSMAKMKMVTPKMTAIRERFK-SDPQ 59 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +AM+ LYKT INPL GC PI++QIPVF ++Y V+ S+EMR+AP+ GWI+DLA+ D Sbjct: 60 KMNQAMMALYKTEKINPLGGCLPIVVQIPVFISLYWVLLASVEMRNAPWLGWIQDLASPD 119 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I P++M++SMF+Q K++P P D QA I+ +MP++F Sbjct: 120 PYYIL-------------------PVLMAVSMFVQTKLNPKPPDPMQAKIMMFMPIIFSV 160 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++YW +NV+SI QQ VI K Sbjct: 161 MFFFFPSGLVLYWVVNNVLSIAQQWVITK 189 >gi|317010178|gb|ADU80758.1| putative inner membrane protein translocase component YidC [Helicobacter pylori India7] Length = 546 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 93/233 (39%), Positives = 141/233 (60%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 319 PMLTDVIEYGLITFFAKGVFALLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 379 KLKELTPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 438 YNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGASMYWHQSV 478 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 TPNTMTDPMQAKIFKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 531 >gi|15646059|ref|NP_208241.1| putative inner membrane protein translocase component YidC [Helicobacter pylori 26695] gi|38502836|sp|O25989|OXAA_HELPY RecName: Full=Inner membrane protein oxaA gi|2314626|gb|AAD08491.1| 60 kDa inner-membrane protein [Helicobacter pylori 26695] Length = 547 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 92/233 (39%), Positives = 142/233 (60%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS Sbjct: 320 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQ 379 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 380 KLKELAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 438 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 439 YNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGASMYWHQSV 479 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 480 TPNTMTDPMQAKIFKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 532 >gi|207091817|ref|ZP_03239604.1| putative inner membrane protein translocase component YidC [Helicobacter pylori HPKX_438_AG0C1] Length = 546 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 92/233 (39%), Positives = 142/233 (60%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS Sbjct: 319 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQ 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 379 KLKELAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 438 YNAVELKSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSV 478 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 TPNTMTDPMQAKIFKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 531 >gi|15612408|ref|NP_224061.1| putative inner membrane protein translocase component YidC [Helicobacter pylori J99] gi|38503266|sp|Q9ZJG8|OXAA_HELPJ RecName: Full=Inner membrane protein oxaA gi|4155955|gb|AAD06920.1| putative Inner membrane protein [Helicobacter pylori J99] Length = 549 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 92/233 (39%), Positives = 141/233 (60%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS Sbjct: 323 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQ 382 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 383 KLKELAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 441 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 442 YNAVELKSSEWVLWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSV 482 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I +P++F L +FPAGL++YW+ N++S++QQ +I K+ Sbjct: 483 TPNTMTDPMQAKIFKLLPLLFTIFLITFPAGLVLYWTTHNILSVLQQLIINKV 535 >gi|189485052|ref|YP_001955993.1| protein translocase subunit YidC [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|254778169|sp|B1GZ50|OXAA_UNCTG RecName: Full=Inner membrane protein oxaA gi|170287011|dbj|BAG13532.1| protein translocase subunit YidC [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 519 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 123/425 (28%), Positives = 223/425 (52%), Gaps = 49/425 (11%) Query: 152 PTTPIKLVFKNANNILFE----------RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGR 201 P K+V K+A I+FE + +L + Y+ + N S+++ +P + Sbjct: 117 PNLTYKVVSKSAEKIVFEYASKEGWKITKIYNLSDLYMHNL-----NISVEKNAKTPFPQ 171 Query: 202 I-MRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI----SNFHESN--SWLGI 254 I ++ P T++ ++E + ++LV Y+ ++ + + NF ++ W + Sbjct: 172 IDLKWGPGLGTDSKELKEN---ISLTRALV---YTAVKPNKLKKLKDNFEPASLCKWTAV 225 Query: 255 SDKYWASVFIPSKETSFHS-QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 ++Y+ FIP F F L H A E + K + +L G K Sbjct: 226 DNRYFLVAFIPKNSMDFDKILFSRLEKKHP-CSVILKAAEPKDVDKKDYSVNFYL--GPK 282 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 ++ + Y+ L E +D+G+F F+ K F ++ +FY L N+G AI++ T +++ Sbjct: 283 DYKYLKTYDLGL-----EKTVDFGFFGFLGKIAFSILVFFYKLTHNYGWAIIMLTTIIQI 337 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 L PL K + S+A MK +QP I +++ K+K + PQ L+ M+ +Y++ +NPL GC P+ Sbjct: 338 LVLPLTLKSFKSSAAMKRVQPVIKDIQTKYKDN-PQRLKAEMLNIYQSQKVNPLGGCLPM 396 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 LLQ+P+F+A + ++ + E+R+ + W+KDL+AAD F FG ++ + Sbjct: 397 LLQLPIFWAFFTMLRNAYELRNEGWILWVKDLSAADQ---FMQFGSF--------NLNLL 445 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P++M + MF Q +M+ +D Q I+ MPV+F F SFP+GL++YW +++IS+++Q Sbjct: 446 PLMMGIGMFFQQRMTTVTSDPTQRKIMYIMPVIFTFMFWSFPSGLVLYWLTNSLISMIEQ 505 Query: 554 AVIMK 558 IMK Sbjct: 506 YFIMK 510 >gi|77361918|ref|YP_341493.1| preprotein translocase; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase [Pseudoalteromonas haloplanktis TAC125] gi|123589158|sp|Q3IK55|OXAA_PSEHT RecName: Full=Inner membrane protein oxaA gi|76876829|emb|CAI88051.1| preprotein translocase ; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase [Pseudoalteromonas haloplanktis TAC125] Length = 544 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 109/329 (33%), Positives = 179/329 (54%), Gaps = 35/329 (10%) Query: 238 EKSSISNFHESN-------SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 EK S S+ + N ++ Y+ S ++P ++ S ++ + ++ +A Sbjct: 232 EKYSFSDMADKNLNKITLGGYVAFIQHYFVSAWVPMQDQS-NTLYSLITKSNAAI-IGVK 289 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I G T T + G KE + DL ++ +D+GW +FI++P+F+L+ Sbjct: 290 DEAVNIQAGSEQTLTATYYMGPKESDVLEAIHPDL-----DLTVDYGWLWFISQPLFVLL 344 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + ++++GN+G+AI+ T+ VK L +PL K QY S A M+ +QPK+ L+EKF Q Sbjct: 345 KWLHSILGNWGVAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMAALKEKFGDD-RQK 403 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 +A +++YK +NP+ GC+PILLQ+P+F A++ V S E+RHA F W+ DL+A D Sbjct: 404 FGQATMEMYKKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFIFWLTDLSAKD- 462 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVF 529 P+Y + PI+ SMFI K+ P D Q ++ +MPV+F Sbjct: 463 ----------PYY--------VLPILFGASMFITQKLQPMTVTDPMQQKMMTFMPVIFSV 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++YW SN+ISIVQ +I + Sbjct: 505 FFLWFPSGLVLYWLVSNLISIVQMLIIYR 533 >gi|317013216|gb|ADU83824.1| putative inner membrane protein translocase component YidC [Helicobacter pylori Lithuania75] Length = 546 Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 92/233 (39%), Positives = 141/233 (60%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y GN+G AI+L T+ V+L+ +PL+ K VS Sbjct: 319 PMLTDVIEYGLITFFAKGVFVLLDYLYQFAGNWGWAIILLTIIVRLILYPLSYKGMVSMQ 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 379 KLKELAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 438 YNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGASMYWHQSV 478 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 TPNTMTDPMQAKIFKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 531 >gi|212211697|ref|YP_002302633.1| 60 kDa inner membrane protein [Coxiella burnetii CbuG_Q212] gi|254772771|sp|B6J2B4|OXAA_COXB2 RecName: Full=Inner membrane protein oxaA gi|212010107|gb|ACJ17488.1| 60 kDa inner membrane protein [Coxiella burnetii CbuG_Q212] Length = 566 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 126/411 (30%), Positives = 207/411 (50%), Gaps = 32/411 (7%) Query: 156 IKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 ++L + + +L +T + + Y + V NN+ + S +I R +P T + F Sbjct: 165 VQLTGRAPDGLLVTKTYTFHRDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHF 224 Query: 215 GVQEGFIAVLGDKSLVEQK--YSDIEKSSISNFHESNSWLGISDKYWASVFIPSK-ETSF 271 V+ A +G +K Y ++K +I +S W+ + Y+ S ++P E ++ Sbjct: 225 YVRSYNGASMGSPQTPYEKLSYESLDKQNIDRTSQSG-WIAMQQHYFLSAWVPGNPELTY 283 Query: 272 H--SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 H S SD Y F + ++ + G T L+ G P I K LA P Sbjct: 284 HYYSHVIPASDEPNVYVVGFVSPQMNVAAGSEAATHATLYVG----PEIAKRLKGLA-PG 338 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E ID+GW + I+ +F ++S + + N+G +I++TT+ +K++F+ + K + S A M Sbjct: 339 LERTIDYGWLWPISMLLFWILSAVHAVFKNWGWSIIITTILIKIVFYWFSAKSFRSMARM 398 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L+E+ Q L +A ++LY+ INPL GC P+L+Q+PVF A Y VI Sbjct: 399 REMQPRIQALKERHGDDR-QALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIE 457 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+++R APF WI DL+ DP I PIIM LSM Q +SP Sbjct: 458 SVQLRQAPFIFWIHDLSVKDPYYIL-------------------PIIMGLSMLAQQWLSP 498 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 D Q ++ +PV+F +FPAGL++YW +NV+ +QQ + K + Sbjct: 499 TSPDPTQQKMMWILPVIFTVFFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549 >gi|21672310|ref|NP_660377.1| inner membrane protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|21622909|gb|AAM67588.1| inner membrane protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 537 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 89/237 (37%), Positives = 145/237 (61%), Gaps = 21/237 (8%) Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 E L P ++ +D+G+ +F+++P+F L+S +N +GN+G +I+L T +K + +PL K Sbjct: 312 EMALVAPNLDLTVDYGFLWFLSQPLFKLLSTIHNFIGNWGFSIILITFMMKAITYPLTKA 371 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 QY S + M+ +QPKI+EL++ F Q + K ++ LYK INPL GC P+ +Q+P+F Sbjct: 372 QYTSMSKMRELQPKINELKKNFGHD-KQRMSKEIMALYKKEKINPLGGCLPVFIQMPIFL 430 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 ++Y ++ S+E+RHAPF WIKDL+ D P+Y + PI M L+M Sbjct: 431 SLYYMLIGSVELRHAPFLFWIKDLSDQD-----------PYY--------VLPIFMGLTM 471 Query: 502 -FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FIQ S +D Q I+++MP +F FP+GL++Y+ SN+++I+QQ I+ Sbjct: 472 FFIQRTSSNNISDPFQQKIMHFMPFIFTVFFLWFPSGLVLYYIVSNLVTIIQQKYIL 528 >gi|255321601|ref|ZP_05362759.1| inner membrane protein OxaA [Campylobacter showae RM3277] gi|255301457|gb|EET80716.1| inner membrane protein OxaA [Campylobacter showae RM3277] Length = 520 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 92/252 (36%), Positives = 150/252 (59%), Gaps = 26/252 (10%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + GAK+ T+ ++L +I++GWF FIAKPMF +++ Y +GN+G AI++ T Sbjct: 283 YIGAKDHATLSQINEELVD-----VIEYGWFTFIAKPMFAFLNWLYGYIGNWGWAIVVLT 337 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + V++ K +S +K++ PK+ EL+ K+K PQ L M++LYK + NP+ Sbjct: 338 LTVRIALSWFTYKGMLSMNKLKDLAPKVKELQAKYK-GDPQKLNMHMMELYKKNGANPMG 396 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC PIL+QIP+FFAIY+V+ ++E++ AP+ WI DL+ DP + Sbjct: 397 GCLPILMQIPIFFAIYRVLLNAIELKAAPWILWIHDLSVMDPYFVL-------------- 442 Query: 489 HVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 PI+M +MF+Q K++P +D Q I+ ++P++F F +FPAGL +YW +NV Sbjct: 443 -----PILMGATMFLQQKLTPTTFSDPMQEKIMKFLPLIFTFFFVTFPAGLTLYWFVNNV 497 Query: 548 ISIVQQAVIMKM 559 S++QQ + K+ Sbjct: 498 CSVIQQVFVNKL 509 >gi|22654213|sp|P29431|OXAA_BUCAP RecName: Full=Membrane protein oxaA Length = 536 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 89/237 (37%), Positives = 145/237 (61%), Gaps = 21/237 (8%) Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 E L P ++ +D+G+ +F+++P+F L+S +N +GN+G +I+L T +K + +PL K Sbjct: 311 EMALVAPNLDLTVDYGFLWFLSQPLFKLLSTIHNFIGNWGFSIILITFMMKAITYPLTKA 370 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 QY S + M+ +QPKI+EL++ F Q + K ++ LYK INPL GC P+ +Q+P+F Sbjct: 371 QYTSMSKMRELQPKINELKKNFGHD-KQRMSKEIMALYKKEKINPLGGCLPVFIQMPIFL 429 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 ++Y ++ S+E+RHAPF WIKDL+ D P+Y + PI M L+M Sbjct: 430 SLYYMLIGSVELRHAPFLFWIKDLSDQD-----------PYY--------VLPIFMGLTM 470 Query: 502 -FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FIQ S +D Q I+++MP +F FP+GL++Y+ SN+++I+QQ I+ Sbjct: 471 FFIQRTSSNNISDPFQQKIMHFMPFIFTVFFLWFPSGLVLYYIVSNLVTIIQQKYIL 527 >gi|254779961|ref|YP_003058068.1| putative inner membrane protein translocase component YidC [Helicobacter pylori B38] gi|254001874|emb|CAX30124.1| Putative inner membrane insertion protein; putative membrane protein; putative signal peptide [Helicobacter pylori B38] Length = 546 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 92/233 (39%), Positives = 141/233 (60%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS Sbjct: 319 PMLTDAIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQ 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 379 KLKELAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 438 YNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGASMYWHQSV 478 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 TPNTMTDPMQAKIFKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 531 >gi|108563801|ref|YP_628117.1| putative inner membrane protein translocase component YidC [Helicobacter pylori HPAG1] gi|107837574|gb|ABF85443.1| 60 kDa inner-membrane protein [Helicobacter pylori HPAG1] Length = 548 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 92/233 (39%), Positives = 141/233 (60%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+ T+ V+L+ +PL+ K VS Sbjct: 321 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIIFLTIIVRLILYPLSYKGMVSMQ 380 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 381 KLKELSPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 439 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 440 YNAVELKSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSV 480 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 481 TPNTMTDPMQAKIFKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 533 >gi|91202840|emb|CAJ72479.1| similar to inner membrane protein YidC [Candidatus Kuenenia stuttgartiensis] Length = 563 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 106/318 (33%), Positives = 179/318 (56%), Gaps = 29/318 (9%) Query: 251 WLGISDKYWASVFIPSKE---TSFHSQ---FKYLSDGHARYQAKF----SANEITILPGK 300 W G ++KY+A+V P+ S H Q + + Q F I I P Sbjct: 245 WAGSTNKYFATVLKPASSEWVASVHLQAFDMQGMPSEEKAEQGDFMVSLQTGRIHIAPHT 304 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 S+ F G K+ + Y + +I +GW I+K + ++ +N++ N+ Sbjct: 305 SVRHGYLYFVGPKKEEVLGQYGT------MDAIISYGWLNVISKLLLGFLNAVHNVIPNY 358 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 GI+I++ T+ +K L FPL +K VS M+ +QP I++L+EK+K + ++ Q+ ++ L+K Sbjct: 359 GISIIVLTIIIKALLFPLTRKSQVSMFRMQQLQPLINQLKEKYKNNKQKIGQEQVL-LFK 417 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 + +NP++GC P++LQ+PVFFA+++ + +S EMR APF WI DL+ D TL L Sbjct: 418 KYGVNPMSGCLPMILQLPVFFALFRTLQLSFEMRQAPFVFWINDLSMPD-----TLM-YL 471 Query: 481 PFYLPGFMH-VGIWPIIMSLSMFIQMKMSPP-----PADKGQAMILNWMPVVFVFALSSF 534 PF +P + + I PIIM+ + F+QMK++P P + Q ++++MP++F F L Sbjct: 472 PFTIPFLGNTLNILPIIMTGASFVQMKLTPKSPATDPQAQAQQKMMSFMPIMFAFILYKM 531 Query: 535 PAGLIIYWSWSNVISIVQ 552 P+GL +YW+ S + SIV+ Sbjct: 532 PSGLTLYWTTSTIFSIVE 549 >gi|317014863|gb|ADU82299.1| membrane protein insertase [Helicobacter pylori Gambia94/24] Length = 547 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 92/233 (39%), Positives = 141/233 (60%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+ T+ V+L+ +PL+ K VS Sbjct: 321 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIIFLTIIVRLILYPLSYKGMVSMQ 380 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 381 KLKELAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 439 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 440 YNAVELKSSEWVLWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSV 480 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 481 TPNTMTDPMQAKIFKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 533 >gi|210135616|ref|YP_002302055.1| putative inner membrane protein translocase component YidC [Helicobacter pylori P12] gi|210133584|gb|ACJ08575.1| inner membrane protein translocase component [Helicobacter pylori P12] Length = 546 Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 92/233 (39%), Positives = 141/233 (60%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+ T+ V+L+ +PL+ K VS Sbjct: 319 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIIFLTIIVRLILYPLSYKGMVSMQ 378 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 379 KLKELAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 437 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 438 YNAVELKSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSV 478 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 479 TPNTMTDPMQAKIFKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 531 >gi|308185213|ref|YP_003929346.1| putative inner membrane protein translocase component YidC [Helicobacter pylori SJM180] gi|308061133|gb|ADO03029.1| putative inner membrane protein translocase component YidC [Helicobacter pylori SJM180] Length = 548 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 91/233 (39%), Positives = 142/233 (60%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+ T+ V+++ +PL+ K VS Sbjct: 321 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIIFLTIIVRIILYPLSYKGMVSMQ 380 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 381 KLKELAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 439 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 440 YNAVELKSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSV 480 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 481 TPNTMTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 533 >gi|242310495|ref|ZP_04809650.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239522893|gb|EEQ62759.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 538 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 89/253 (35%), Positives = 151/253 (59%), Gaps = 26/253 (10%) Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 F + G K++ + + +L ++++G F AKP+F+L+ Y+L GN+G AI+L Sbjct: 288 FGYIGPKDYRLLESIDTNLT-----DVVEYGMITFFAKPLFLLLETLYDLCGNWGWAIIL 342 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 T+ V+++ +PL K VS +K++ PK+ E+++K+K PQ LQ M+ LYK H NP Sbjct: 343 LTLIVRIILYPLTYKGMVSMQKLKDLAPKMKEIQQKYK-GEPQKLQAHMMDLYKKHGANP 401 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 + GC P+LLQ+PVFFAIY+V+ ++E++ A + WI+DL+ DP Sbjct: 402 MGGCLPLLLQMPVFFAIYRVLYNAIELKGAAWLLWIQDLSVMDP---------------- 445 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + PI+M ++M++Q ++P D Q I ++P++F +FP+GL++YW + Sbjct: 446 ---YFVLPILMGITMYLQQHLTPATFNDPIQEKIFKFLPLIFTIFFVTFPSGLVLYWFVN 502 Query: 546 NVISIVQQAVIMK 558 N+ SI+QQ +I K Sbjct: 503 NIFSILQQLIINK 515 >gi|153209754|ref|ZP_01947492.1| Inner membrane protein oxaA [Coxiella burnetii 'MSU Goat Q177'] gi|212217713|ref|YP_002304500.1| 60 kDa inner membrane protein [Coxiella burnetii CbuK_Q154] gi|254772770|sp|B6J8U7|OXAA_COXB1 RecName: Full=Inner membrane protein oxaA gi|120575257|gb|EAX31881.1| Inner membrane protein oxaA [Coxiella burnetii 'MSU Goat Q177'] gi|212011975|gb|ACJ19355.1| 60 kDa inner membrane protein [Coxiella burnetii CbuK_Q154] Length = 566 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 126/411 (30%), Positives = 207/411 (50%), Gaps = 32/411 (7%) Query: 156 IKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 ++L + + +L +T + + Y + V NN+ + S +I R +P T + F Sbjct: 165 VQLTGRAPDGLLVTKTYTFHRDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHF 224 Query: 215 GVQEGFIAVLGDKSLVEQK--YSDIEKSSISNFHESNSWLGISDKYWASVFIPSK-ETSF 271 V+ A +G +K Y ++K +I +S W+ + Y+ S ++P E ++ Sbjct: 225 YVRSYNGASMGSPQTPYEKLSYESLDKQNIDRTSQSG-WIAMQQHYFLSAWVPGNPELTY 283 Query: 272 H--SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 H S S Y F + ++ + G T L+ G P I K LA P Sbjct: 284 HYYSHVIPASGEPNVYVVGFVSPQMNVAAGSEAATHATLYVG----PEIAKRLKGLA-PG 338 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E ID+GW + I+ +F ++S + +V N+G +I++TT+ +K++F+ + K + S A M Sbjct: 339 LERTIDYGWLWPISMLLFWILSAVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARM 398 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L+E+ Q L +A ++LY+ INPL GC P+L+Q+PVF A Y VI Sbjct: 399 REMQPRIQALKERHGDDR-QALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIE 457 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+++R APF WI DL+ DP I PIIM LSM Q +SP Sbjct: 458 SVQLRQAPFIFWIHDLSVKDPYYIL-------------------PIIMGLSMLAQQWLSP 498 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 D Q ++ +PV+F +FPAGL++YW +NV+ +QQ + K + Sbjct: 499 TSPDPTQQKMMWILPVIFTVFFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549 >gi|154706390|ref|YP_001423626.1| 60 kDa inner membrane protein [Coxiella burnetii Dugway 5J108-111] gi|189036347|sp|A9KBT1|OXAA_COXBN RecName: Full=Inner membrane protein oxaA gi|154355676|gb|ABS77138.1| 60 kDa inner membrane protein [Coxiella burnetii Dugway 5J108-111] Length = 566 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 126/411 (30%), Positives = 207/411 (50%), Gaps = 32/411 (7%) Query: 156 IKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 ++L + + +L +T + + Y + V NN+ + S +I R +P T + F Sbjct: 165 VQLTGRAPDGLLVTKTYTFHRDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHF 224 Query: 215 GVQEGFIAVLGDKSLVEQK--YSDIEKSSISNFHESNSWLGISDKYWASVFIPSK-ETSF 271 V+ A +G +K Y ++K +I +S W+ + Y+ S ++P E ++ Sbjct: 225 YVRSYNGASMGSPQTPYEKLSYESLDKQNIDRTSQSG-WIAMQQHYFLSAWVPGNPELTY 283 Query: 272 H--SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 H S S Y F + ++ + G T L+ G P I K LA P Sbjct: 284 HYYSHVIPASGEPNVYVVGFVSPQMNVAAGSEAATHATLYVG----PEIAKRLKGLA-PG 338 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E ID+GW + I+ +F ++S + +V N+G +I++TT+ +K++F+ + K + S A M Sbjct: 339 LERTIDYGWLWPISMLLFWILSSVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARM 398 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L+E+ Q L +A ++LY+ INPL GC P+L+Q+PVF A Y VI Sbjct: 399 REMQPRIQALKERHGDDR-QALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIE 457 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+++R APF WI DL+ DP I PIIM LSM Q +SP Sbjct: 458 SVQLRQAPFIFWIHDLSVKDPYYIL-------------------PIIMGLSMLAQQWLSP 498 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 D Q ++ +PV+F +FPAGL++YW +NV+ +QQ + K + Sbjct: 499 TSPDPTQQKMMWILPVIFTVFFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549 >gi|298735584|ref|YP_003728107.1| preprotein translocase subunit YidC [Helicobacter pylori B8] gi|298354771|emb|CBI65643.1| preprotein translocase YidC subunit [Helicobacter pylori B8] Length = 544 Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 91/233 (39%), Positives = 142/233 (60%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+ T+ V+++ +PL+ K VS Sbjct: 317 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIIFLTIIVRIILYPLSYKGMVSMQ 376 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 377 KLKELAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 435 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 436 YNAVELKSSEWILWIHDLSIMDP-------------------YFILPLLMGASMYWHQSV 476 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 477 TPNTMTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKI 529 >gi|262273127|ref|ZP_06050944.1| OxaI/YidC membrane insertion protein [Grimontia hollisae CIP 101886] gi|262222883|gb|EEY74191.1| OxaI/YidC membrane insertion protein [Grimontia hollisae CIP 101886] Length = 522 Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 112/330 (33%), Positives = 181/330 (54%), Gaps = 31/330 (9%) Query: 232 QKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS D++ +++ W G+ Y+ + +IP + + + S+G ++ Sbjct: 210 EKYSFDDMKDRNLNLTIAEQGWAGMMQHYFVAAWIPHSDGE-ANLYTRTSNGQGFIGVRY 268 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 T+ G + L+ G P + + A P + +D+GW +FIA P+ L Sbjct: 269 PTT--TVAAGSTAQLDATLWVG----PKLQDQMEQTA-PNLNLTVDYGWLWFIASPLHWL 321 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S VGN+G+AI++ T V+ + +PL K QY S A M+ +QPK+ E+RE+ Q Sbjct: 322 LSTIQGFVGNWGVAIIILTFIVRGVMYPLTKAQYTSMAKMRMLQPKLQEMRERIGDD-RQ 380 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M++LYK +NPL GC P+LLQ+P+F A+Y + S+E+RHAPF WI+DL+A D Sbjct: 381 RMSQEMMELYKKEKVNPLGGCLPLLLQMPIFIALYWALMESVELRHAPFMLWIQDLSAPD 440 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 PFY + P++M SMF+ KMSP D Q I+N+MPV+F Sbjct: 441 -----------PFY--------VLPLLMGASMFLIQKMSPSTVTDPMQQKIMNFMPVMFT 481 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW SN+++++QQ +I + Sbjct: 482 VFFLWFPAGLVLYWLVSNIVTLLQQTLIYR 511 >gi|27904529|ref|NP_777655.1| hypothetical protein bbp016 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38502982|sp|Q89B34|OXAA_BUCBP RecName: Full=Membrane protein oxaA gi|27903926|gb|AAO26760.1| putative membrane protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 536 Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 110/347 (31%), Positives = 198/347 (57%), Gaps = 35/347 (10%) Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYS-----DIEKSSISNFHESNSWLGISDKYWASVF 263 T TN F +Q A + KYS + EK +I H + W+ + KY+A+ + Sbjct: 203 TYTNNFALQTFRGAAYSSDNDKYVKYSFDSIVNKEKKNIVVTH--SGWVAMLQKYFATSW 260 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 IP + S+ + S G + + + I I P +I+ ++ L+ G P I + Sbjct: 261 IP--DNSYLNTMYIGSSGDNLAEIGYYSRPIDIFPHSTISLSSKLWIG----PEIQNKMA 314 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 +A ++ +D+GW +F+++P+F L+++ YN+ GN+G++I+L T +K + FPL K Q+ Sbjct: 315 VIA-SNLDLTVDYGWLWFLSQPLFKLLNFLYNICGNWGVSIILITFIIKGITFPLTKSQF 373 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + A ++ +QPKI+ +++KFK + ++ ++ M LYKT +NPL GC+P+ +Q+P+F A+ Sbjct: 374 KTMAKIRKLQPKINYIKKKFKNNNQKISEEIM-SLYKTEKVNPLGGCFPLFIQMPIFLAL 432 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y ++ S+E+RHAPF+ WI DL+ D PFY + PI+M ++MF Sbjct: 433 YYMLISSVELRHAPFFLWIHDLSDQD-----------PFY--------VLPILMGVTMFF 473 Query: 504 QMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 +++P D Q I+N++P++F FP+GL++Y+ SN+++ Sbjct: 474 IQRVTPSNVTDPVQKKIMNYIPILFTVFFLWFPSGLVLYYLISNLVT 520 >gi|87122922|ref|ZP_01078787.1| inner membrane protein, 60 kDa [Marinomonas sp. MED121] gi|86161795|gb|EAQ63095.1| inner membrane protein, 60 kDa [Marinomonas sp. MED121] Length = 547 Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 127/410 (30%), Positives = 203/410 (49%), Gaps = 38/410 (9%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 + L F + + + + +T + + + TV NNS + + +I R + + + Sbjct: 163 VNLYFTDVHGVQYTKTFTFQRGEFAVRQQITVDNNSNAAWQGNLFAQIKRDNTEDPSASS 222 Query: 215 GVQEGFIAVLGDKSLVEQ------KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 G+ G LG E+ +SD+ +S + + W+ + Y+ S ++P Sbjct: 223 GM--GLQPYLGGAISTEENPYTKVSFSDMAESP-TKITTTGGWIALLQHYFVSAWVPD-- 277 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 S Y F+ + I G T ++ L+ G K + + P Sbjct: 278 -SNQKATLYTRQKGEFNIIGFTGPSVEIAAGTQGTLSSTLYIGPK-----LQDQLSVTAP 331 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 E+ +D+GW +++A+P+F L++ + V N+G+AI+L V VK LFF L+ Y S A Sbjct: 332 NLELTVDYGWLWWLAQPLFWLLTAIQSFVINWGVAIILVVVVVKALFFKLSAASYRSMAK 391 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ P++ LRE+ Q + AM++LYK INPL GC PIL+Q+PVF A+Y V+ Sbjct: 392 MRKFGPELTRLREQHGDDR-QKMSAAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLM 450 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S+E+RHAPF WI DL+A DP + PI+M +SM Q ++ Sbjct: 451 ESVELRHAPFMLWINDLSAMDPYFVL-------------------PILMGISMLGQQMLN 491 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P P D QA I+ MP+ F F FP+GL++YW +N +SI+QQ VI K Sbjct: 492 PTPPDPMQARIMKIMPIAFTFFFLWFPSGLVLYWVVNNTLSILQQYVITK 541 >gi|307638101|gb|ADN80551.1| Inner membrane protein translocase component [Helicobacter pylori 908] gi|325996702|gb|ADZ52107.1| Inner membrane protein translocase component [Helicobacter pylori 2018] gi|325998294|gb|ADZ50502.1| putative inner membrane protein translocase component [Helicobacter pylori 2017] Length = 547 Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 91/233 (39%), Positives = 141/233 (60%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+ T+ V+++ +PL+ K VS Sbjct: 321 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIIFLTIIVRIVLYPLSYKGMVSMQ 380 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 381 KLKELAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 439 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 440 YNAVELKSSEWVLWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSV 480 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 481 TPNTMTDPMQAKIFKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKV 533 >gi|1369897|dbj|BAA12844.1| inner membrane protein [Buchnera aphidicola] gi|2827010|gb|AAC38102.1| 60-kDa protein [Buchnera aphidicola] Length = 536 Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 88/237 (37%), Positives = 145/237 (61%), Gaps = 21/237 (8%) Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 E L P ++ +D+G+ +F+++P+F L+S +N +GN+G +I+L T +K + +P+ K Sbjct: 311 EMALVAPNLDLTVDYGFLWFLSQPLFKLLSTIHNFIGNWGFSIILITFMMKAITYPVTKA 370 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 QY S + M+ +QPKI+EL++ F Q + K ++ LYK INPL GC P+ +Q+P+F Sbjct: 371 QYTSMSKMRELQPKINELKKNFGHD-KQRMSKEIMALYKKEKINPLGGCLPVFIQMPIFL 429 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 ++Y ++ S+E+RHAPF WIKDL+ D P+Y + PI M L+M Sbjct: 430 SLYYMLIGSVELRHAPFLFWIKDLSDQD-----------PYY--------VLPIFMGLTM 470 Query: 502 -FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FIQ S +D Q I+++MP +F FP+GL++Y+ SN+++I+QQ I+ Sbjct: 471 FFIQRTSSNNISDPFQQKIMHFMPFIFTVFFLWFPSGLVLYYIVSNLVTIIQQKYIL 527 >gi|260221779|emb|CBA30684.1| Inner membrane protein oxaA [Curvibacter putative symbiont of Hydra magnipapillata] Length = 565 Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 136/478 (28%), Positives = 236/478 (49%), Gaps = 43/478 (8%) Query: 98 HLDVSSNSPIVTLLSPSNTKNAYF-AELDYVSTANNIELPNSNTVWNLISGKILTP-TTP 155 +LD + S LL +TK+ Y+ A+ + A P +V + K L Sbjct: 106 YLDSNDKSRNFVLLD--DTKDRYYQAQTGLIGGAAPDSFPTHKSVMAVSGDKSLKDGQDE 163 Query: 156 IKLVF--KNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTA 210 +K+VF ++ I +T +L Y + V N + +++R +KP Sbjct: 164 LKIVFTSQDTGGIKLVKTYTLRRGAYDIAVKHEVVNTGATALNPQLYLQLVRDGNKPAGE 223 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFI-PSKE 268 ++ + G K + ++S I+K + ES N ++ + Y+AS +I P+ E Sbjct: 224 SSFYSTFTGPAVYTDLKKYQKVEFSAIKKGNADFEKESSNGYIAMVQHYFASAWILPADE 283 Query: 269 T---SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 S ++ + Y+A + PG++ LF G +E EK L Sbjct: 284 KRTFSLDAKDVGATVADCCYRATMITPLEAVAPGQTKAVEAKLFVGPQE-------EKKL 336 Query: 326 AI--PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 P E++ D+GW +AKP++ L+ ++ + N+G +I+ + +K+ F+ L K Y Sbjct: 337 EALAPGMELVKDYGWLTILAKPLYWLLDKLHSFIQNWGWSIVALVLLLKIAFYWLNAKAY 396 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S A MK + P+I E+RE+ K +P Q +Q+ M+++Y+ +NP+ GC+PI++QIPVF A+ Sbjct: 397 ASMAKMKAVNPRIMEMRERLKDNPQQ-MQQEMMKIYREEKVNPMGGCFPIMIQIPVFIAL 455 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y V+ S+EMR+AP+ WI DL++ DP I P++M+L+ + Sbjct: 456 YWVLLSSVEMRNAPWVMWIHDLSSPDPYFIL-------------------PVVMTLTTLL 496 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 Q ++P P D QA ++ MP+ F FP+GL++YW +N++SI QQ +I G Sbjct: 497 QTALNPAPPDPLQAKMMWIMPLAFSVMFFFFPSGLVLYWITNNILSIAQQWIINTRMG 554 >gi|312882242|ref|ZP_07741988.1| putative inner membrane protein translocase component YidC [Vibrio caribbenthicus ATCC BAA-2122] gi|309370086|gb|EFP97592.1| putative inner membrane protein translocase component YidC [Vibrio caribbenthicus ATCC BAA-2122] Length = 551 Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 119/345 (34%), Positives = 192/345 (55%), Gaps = 37/345 (10%) Query: 226 DKSLVEQKYS--DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 D+ +KYS D++ S+S + W+ + Y+A+ +IP E + +S+ + Sbjct: 220 DQDTRYKKYSFDDMQDKSLSITLPDGKGWVAMIQHYFATAWIPRNEPDTKIYTRVVSNDN 279 Query: 283 ARYQAKF-SANEITI-LPGKSITTTN------FLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 A+ + +I I +P K+I + L+ G P + ++A ++++ Sbjct: 280 TFDPAQDNTVGDIGIRMPNKTIADGDKAQFLATLWVG----PKLQDQMAEVA-DNLDLVV 334 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GW +FIAKP+ L+SY +N VGN+G AI+ T V+ +PL K QY S A M+ +QP Sbjct: 335 DYGWLWFIAKPLHSLLSYIHNFVGNWGFAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQP 394 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 K+ +RE+ Q + + M++LYK +NPL GC P+LLQ+P+F A+Y + S+E+R Sbjct: 395 KLQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPLLLQMPIFIALYWALMESVELR 453 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-AD 513 H+PF+GWI DL+A DP I P++M SMF+ KMSP D Sbjct: 454 HSPFFGWITDLSAKDPYFIL-------------------PLLMGASMFMIQKMSPTTVTD 494 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K Sbjct: 495 PMQQKIMTFMPVMFTFFFIFFPSGLVLYWLVSNIVTLIQQTLIYK 539 >gi|33519495|ref|NP_878327.1| putative preprotein translocase subunit YidC [Candidatus Blochmannia floridanus] gi|38502910|sp|Q7U351|OXAA_BLOFL RecName: Full=Inner membrane protein oxaA gi|33517158|emb|CAD83540.1| Preprotein translocase subunit YidC [Candidatus Blochmannia floridanus] Length = 558 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 140/495 (28%), Positives = 238/495 (48%), Gaps = 58/495 (11%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 + +K + IN ++ L Y +++S P+ L + K + +++ ++ Sbjct: 68 ITIKTDVFLLKINTYSGNIEEAYLNNYQENLNSQKPLKLLHTSKENKYQAYIDIETLNEY 127 Query: 131 NNIELPNSNTVWNLISGKILTPTTPI----------KLVFKNANNILFERTISLDEH-YL 179 +L N L I L ++ NNI++ + L+ + Y Sbjct: 128 FTNDLNQKNKKHYLYYSNTTNQCEYILKNNENKLQFDLTYQGPNNIIYTKRYLLNRNDYS 187 Query: 180 FKIVDTVTNNSIDQIRFSPRGR--------IMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 I + N S I G +++ K + QE + +K Sbjct: 188 IYITYIIDNQSTYPIHIKLYGNLIQSIHSDVIQSKHNDHCPLYTYQEAAYSTDTEKY--- 244 Query: 232 QKYS--DIEKSSISNFHESNSWLGISDKYWASVFIP--SKETSFHSQFKYLSDGHARYQA 287 QKY+ DI+ +++ N H +N W+ + KY+ +P K+ +F++ + D +++ Sbjct: 245 QKYNLKDIKHTNL-NIHSTNGWIALLQKYFIIALLPITPKDNTFYTTYLNNHDISIGFKS 303 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F I I PGK + L+ G P I K L P +++ID+GW +FI+ P+F Sbjct: 304 DF----IHIPPGKKNELQSILWMG----PKIQDNMK-LVAPNLDLVIDYGWLWFISHPLF 354 Query: 348 MLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 L+ + + + N+GI+I+L TV ++L+ +PL K QY S A ++ +QPK+ ++E++K Sbjct: 355 KLLQFIHTYTIDNWGISIILITVIIRLIMYPLTKAQYTSMAKIRMLQPKLISIQEEYKHD 414 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q QK I+LYK +NPL GC P+L+Q+P+F A+Y ++S S+E+RHA F WIKDL+ Sbjct: 415 KYQYHQKT-IELYKKEKVNPLGGCLPLLIQMPIFLALYYMLSESVELRHAKFAFWIKDLS 473 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 D P+Y I PIIM ++MF K+SP D Q I+N M V Sbjct: 474 DQD-----------PYY--------ILPIIMGITMFFIQKLSPTTITDPIQKKIMNIMLV 514 Query: 526 VFVFALSSFPAGLII 540 +F FP+GL++ Sbjct: 515 IFTIFFLWFPSGLVL 529 >gi|254521534|ref|ZP_05133589.1| inner membrane protein OxaA [Stenotrophomonas sp. SKA14] gi|219719125|gb|EED37650.1| inner membrane protein OxaA [Stenotrophomonas sp. SKA14] Length = 571 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 138/501 (27%), Positives = 238/501 (47%), Gaps = 56/501 (11%) Query: 84 LKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWN 143 L G + D L + SP V LL+ + + Y A + S N +P ++ Sbjct: 92 LDGGRVLDAELLQFPQTKDEGSPPVRLLT-EDPAHPYSAISGWASEDKNTPVPGADGF-- 148 Query: 144 LISGKILTPTTP-----------IKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSI 191 K++ T I V+ N + +RT+++ + Y + D V+N Sbjct: 149 ----KLVGDTNDFVLAKGQNELQIPFVWTADNGVTIKRTLTVSRNEYAVRFKDEVSNTGT 204 Query: 192 DQ-----IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 R R + + T ++F G DK + + D + N + Sbjct: 205 APWNGYVYRTLDRTPTILSRSMTNPDSFSF-NGATWYDNDKKYQRRAFKDYLEDGTLNQN 263 Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTN 306 + WL + ++ + +IP K+ + H ++ G +A+ A T+ PG+S +T Sbjct: 264 ITGGWLAMLQHHFFTAWIPQKDQTAHYVLSQVA-GRDLIEARGPA--FTVAPGQSTSTEA 320 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNFGIA 363 L+ G K I + +P + ++D+ F +A + +F +++ + LVGN+G A Sbjct: 321 RLWVGPKLVNLIAKED----VPGLDRVVDYSRFSMMAVIGQGLFWVLNQVHKLVGNWGWA 376 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ V +KL+ +PL+ QY S A M+ QP+I +L+E++ Q Q AM++LYK Sbjct: 377 IVGLVVLLKLVLYPLSATQYKSGAKMRRFQPRIAQLKERYGDDR-QKFQTAMMELYKKEK 435 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 INP+ GC PIL+Q+P+FFA+Y V+ S+E+R AP++GWI+DL A DP I Sbjct: 436 INPMGGCLPILIQMPIFFALYWVLVESVELRQAPWFGWIQDLTARDPYFIL--------- 486 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P+I M+ K++P P D Q ++ +MP+VF ++ P+GL++YW Sbjct: 487 ----------PVINVAVMWFTQKLTPAPGMDPMQQKMMQFMPLVFGVMMAFMPSGLVLYW 536 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 + + ++QQ + K HG E Sbjct: 537 VVNGGLGLLQQWWMTKRHGGE 557 >gi|254672457|emb|CBA05875.1| 60kDa inner-membrane protein [Neisseria meningitidis alpha275] Length = 298 Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 97/255 (38%), Positives = 148/255 (58%), Gaps = 26/255 (10%) Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 KS + N L+AG + I + +L + + D+G ++ A P+F L++ +N++G Sbjct: 52 AKSEASIN-LYAGPQTTSVIANIADNLQLAK-----DYGKVHWFASPLFWLLNQLHNIIG 105 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Q+AM+QL Sbjct: 106 NWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDR-MAQQQAMMQL 164 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI DL+ +D Sbjct: 165 YKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRSD--------- 215 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 P+Y I PIIM+ +MF Q ++PPP D QA ++ MP+VF FPAGL Sbjct: 216 --PYY--------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFFPAGL 265 Query: 539 IIYWSWSNVISIVQQ 553 ++YW +N+++I QQ Sbjct: 266 VLYWVVNNLLTIAQQ 280 >gi|42525232|ref|NP_970612.1| 60 KD inner-membrane protein [Bdellovibrio bacteriovorus HD100] gi|39577443|emb|CAE81266.1| 60 KD inner-membrane protein [Bdellovibrio bacteriovorus HD100] Length = 539 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 104/314 (33%), Positives = 171/314 (54%), Gaps = 34/314 (10%) Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK---SITT 304 + S + +S +Y+A+ + E + +A+ AK + E+ P +T Sbjct: 248 ATSLVSVSSQYFAAAILDKSEIMPEVKL------NAQINAKTAMAELVYKPASVKPEMTF 301 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 + +AG K + + ++A LID+G+F FIA+P+ +M +++VGN+G AI Sbjct: 302 SEVFYAGPKSIDALKAVDPEMA-----SLIDFGFFGFIARPLLYVMKAAHSVVGNWGFAI 356 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 ++ T+ V+L P + S M+ +QP I LREK+K+ P + L + M+ + K + Sbjct: 357 IILTLLVRLCVLPFNIMSFKSMKAMQKVQPIIQGLREKYKEDPMR-LNQEMMAVMKQNGA 415 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NPL GC P+LLQIPVFFA+Y+VI S+E+ ++PF WI DL++ D FY Sbjct: 416 NPLGGCLPMLLQIPVFFALYRVIGSSIELYNSPFILWITDLSSHD-----------KFY- 463 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 + P+ M++ M+IQ K++P D QA I+ ++PVVF + PAGL +Y Sbjct: 464 -------VLPVSMAVFMYIQQKITPSTMDPTQAKIMAFLPVVFSLFMLQLPAGLTLYMVV 516 Query: 545 SNVISIVQQAVIMK 558 S + I+QQ +IM+ Sbjct: 517 STLFGIIQQWLIMR 530 >gi|190576475|ref|YP_001974320.1| putative inner membrane protein translocase component YidC [Stenotrophomonas maltophilia K279a] gi|254778166|sp|B2FPA5|OXAA_STRMK RecName: Full=Membrane protein oxaA gi|190014397|emb|CAQ48045.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a] Length = 571 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 138/501 (27%), Positives = 238/501 (47%), Gaps = 56/501 (11%) Query: 84 LKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWN 143 L G + D L + SP V LL+ + + Y A + S N +P ++ Sbjct: 92 LDGGRVLDAELLQFPQTKDEGSPPVRLLT-EDPAHPYSAISGWASEDRNTPVPGADGF-- 148 Query: 144 LISGKILTPTTP-----------IKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSI 191 K++ T I V+ N + +RT+++ + Y + D V+N Sbjct: 149 ----KLVGDTKDFVLAKGQNELQIPFVWTADNGVTIKRTLTVSRNEYAVRFKDEVSNAGA 204 Query: 192 DQ-----IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 R R + + T ++F G DK + + D + N + Sbjct: 205 APWNGYVYRTLDRTPTILSRSMTNPDSFSF-NGATWYDNDKKYQRRAFKDYLEDGTLNQN 263 Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTN 306 + WL + ++ + +IP K+ + H ++ G +A+ A T+ PG+S +T Sbjct: 264 ITGGWLAMLQHHFFTAWIPQKDQTAHYVLSQVA-GRDLIEARGPA--FTVAPGQSTSTEA 320 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNFGIA 363 L+ G K I + +P + ++D+ F +A + +F +++ + LVGN+G A Sbjct: 321 RLWVGPKLVNLIAKED----VPGLDRVVDYSRFSMMAVIGQGLFWVLNQVHKLVGNWGWA 376 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ V +KL+ +PL+ QY S A M+ QP+I +L+E++ Q Q AM++LYK Sbjct: 377 IVGLVVLLKLVLYPLSATQYKSGAKMRRFQPRIAQLKERYGDDR-QKFQTAMMELYKKEK 435 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 INP+ GC PIL+Q+P+FFA+Y V+ S+E+R AP++GWI+DL A DP I Sbjct: 436 INPMGGCLPILIQMPIFFALYWVLVESVELRQAPWFGWIQDLTARDPYFIL--------- 486 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P+I M+ K++P P D Q ++ +MP+VF ++ P+GL++YW Sbjct: 487 ----------PVINVAVMWFTQKLTPAPGMDPMQQKMMQFMPLVFGVMMAFMPSGLVLYW 536 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 + + ++QQ + K HG E Sbjct: 537 VVNGGLGLLQQWWMTKRHGGE 557 >gi|309379512|emb|CBX21878.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 299 Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 145/269 (53%), Gaps = 25/269 (9%) Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A I G T L+AG + I L + + D+G ++ A Sbjct: 38 YSASVGVPLAAIPAGAKAETAVNLYAGPQTTSVIAGIADKLQLAK-----DYGKVHWFAS 92 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 93 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 152 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 153 DDR-MAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 211 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ +DP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 212 LSRSDPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 252 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +VF FPAGL++YW +N+++I QQ Sbjct: 253 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 281 >gi|269468577|gb|EEZ80226.1| Preprotein translocase subunit YidC [uncultured SUP05 cluster bacterium] Length = 546 Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 125/385 (32%), Positives = 202/385 (52%), Gaps = 38/385 (9%) Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+ + VTNNS ++ S +++R+ + G G K + Y I Sbjct: 192 YVITVDYVVTNNSNKELTLSSYTQLVRNALDESNMMMPTFTG-----GAKFDDQDVYEKI 246 Query: 238 EKSSISNFHESNS---WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 E S+ ++ S W + Y+ + +IP + + HS S + Y + Sbjct: 247 EFDDFSSEPKTTSKGGWTAMIQHYFFAAWIPDSDNT-HSYSS--SARNNNYLLTVVNPNV 303 Query: 295 TILPG-KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 +I PG ++ + L+ G KE I D P + +D+G + IAKP+ LM + Sbjct: 304 SIAPGATTVLPGSDLYIGPKEQARI-----DSVAPGLDKTVDYGVLFIIAKPLSELMHWI 358 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y++V ++G +I++ T+ +KL F+ L++K Y S A M+ + P++ +L+E + ++ QK Sbjct: 359 YSIVNSWGWSIIILTILIKLAFYKLSEKSYRSMAGMRKLSPRLTKLKETYGDDKQKLGQK 418 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M +LYK INP +GC PIL+QIPVF ++Y V+ +E+R PFW ++ DL+A DP Sbjct: 419 TM-ELYKKEKINPASGCLPILVQIPVFISLYWVLLEMVELRQTPFW-YLADLSAQDP--- 473 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 +Y I PIIM +SMF+Q K++PPP D QA I+ +P VF Sbjct: 474 --------YY--------ILPIIMGVSMFVQQKLNPPPPDPMQAKIMMSLPFVFTIFFLW 517 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++YW +N++SI QQ VI K Sbjct: 518 FPSGLVLYWVVNNILSITQQWVINK 542 >gi|224372873|ref|YP_002607245.1| putative inner membrane protein translocase component YidC [Nautilia profundicola AmH] gi|223589049|gb|ACM92785.1| inner membrane protein OxaA [Nautilia profundicola AmH] Length = 513 Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 98/256 (38%), Positives = 157/256 (61%), Gaps = 27/256 (10%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + G K T+ +K+L ++ +G F AK +F L+ +FY LVGN+G+AI+L Sbjct: 281 YIGPKFVDTLAAIDKELV-----DVVQYGVGTFFAKNLFFLLDWFYKLVGNWGVAIILLV 335 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 V V+L+ FPL K VS +K + PK+ E+++K+K+ PQ LQ M++LYK H NPL Sbjct: 336 VLVRLVLFPLTYKGMVSMYKLKELAPKMKEIQQKYKKD-PQKLQMHMMKLYKEHGANPLG 394 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P++LQIPVF+ IYK++ ++E++ A F WIKDL+ DP Y Sbjct: 395 GCLPLILQIPVFYGIYKLLLYAIELKGASFL-WIKDLSVMDP------------YF---- 437 Query: 489 HVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 I P++M +SM+I K++P D Q I ++P++F F +++FPAGL++YW+ +N+ Sbjct: 438 ---ILPVLMGVSMYIHQKLTPTNFQDPMQEKIFKFLPLIFTFMMATFPAGLVLYWTVNNI 494 Query: 548 ISIVQQAVIMKMHGAE 563 +SI QQ +I ++ ++ Sbjct: 495 LSIAQQWLINRIMASK 510 >gi|251772740|gb|EES53302.1| putative inner-membrane protein [Leptospirillum ferrodiazotrophum] Length = 399 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 91/233 (39%), Positives = 140/233 (60%), Gaps = 28/233 (12%) Query: 334 IDWGWFYF--------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 +D+GWF F +AK +F+ +S Y + N+G AI+ T+ +K+LF PLA + S Sbjct: 178 VDFGWFLFGRITLVSFLAKFLFVFLSTLYTHMQNYGFAIIFVTLLIKILFSPLAYMSFRS 237 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 M+ +QP+I +L+ K+K Q L AM++LYK INPL GC P+++QIPVF A+Y Sbjct: 238 MNQMQQLQPEIKKLQAKYKDDKAQ-LNAAMMELYKERRINPLGGCLPVIVQIPVFVALYN 296 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 +++ ++E+R APF WI DL+ DP IF PIIM ++M IQ Sbjct: 297 ILNNTVELRQAPFLLWIHDLSIKDPYYIF-------------------PIIMGITMVIQT 337 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K++P D Q I+ ++PVV F +FP+GL++YW +N+++I QQ V+M+ Sbjct: 338 KLTPSTPDPMQRRIMLFLPVVMTFFFLNFPSGLVLYWIVNNLLTIGQQYVLMR 390 >gi|291333888|gb|ADD93569.1| putative inner membrane protein translocase component YidC [uncultured marine bacterium MedDCM-OCT-S04-C293] Length = 526 Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 134/502 (26%), Positives = 238/502 (47%), Gaps = 51/502 (10%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 VE+ N + I+L Q L Y L++ N TLL K YF + +V + Sbjct: 60 VEVSNENQKLEISLSSGQIIKSELLNYPLEI--NGQANTLLFNKCGKENYFLDGGFVVSG 117 Query: 131 NNIELPNSNTVWNLISGKILTPTT-PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNN 189 + P N +L+ + ++++ + N + ISL E++ + N Sbjct: 118 MS-NAPEGNYF------SVLSKSEDSVEIIRRLPNGSTHSKKISLGENFRINFEEEFFNG 170 Query: 190 SIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLG------DKSLVEQKYSDIEKSS 241 ++ +P +I R +T + + G+ Q A LG ++ ++ +S+IE+ Sbjct: 171 EEVEVSVAPYAKINRSSEKTISGSGGIFTQPSSWAYLGPAFSYDGENYDKRSFSEIEEVE 230 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 S W+ + Y+ + +P++ ++ Q K + + F + P S Sbjct: 231 FRT-STSGGWISMIQHYFLTSLLPNQSSNSLLQGKK-NKNDGSFSVGFVEETKKVAPRNS 288 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 I ++G K + DL P+ + ID+G+ Y+I +P+F +M+ + ++G Sbjct: 289 IKNEYSAYSGPKIKGNL-----DLMHPKLGLAIDYGFLYWIGQPIFWVMNLINQAISSWG 343 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +I+L TV +K+ +PL+ Y + M+ +QPK+ EL+E++ Q + + M+ LY Sbjct: 344 WSIVLVTVLIKIFLWPLSYVAYKNMGKMRQLQPKLKELQERYGDDR-QAMSREMMALYSK 402 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NP GC P+LLQ+P F A Y V+ ++E+RHAPF WI DL+ DP LF Sbjct: 403 EKVNPALGCLPMLLQMPFFLAFYWVLIETVELRHAPFMFWIVDLSVRDP-----LF---- 453 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFPAGLI 539 I P++ +M++ + P PA D QA I +MP++F + FPAGL+ Sbjct: 454 ----------ILPLLNMGAMYLMQLLQPQPAGVDPMQARIFKFMPIIFGVLFAFFPAGLV 503 Query: 540 IYWSWSNVISIVQQAVIMKMHG 561 +YW ++++S +Q M MHG Sbjct: 504 LYWLVNSLVSALQ----MLMHG 521 >gi|332976008|gb|EGK12879.1| YidC/Oxa1 family membrane protein insertase [Psychrobacter sp. 1501(2011)] Length = 572 Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 125/479 (26%), Positives = 232/479 (48%), Gaps = 50/479 (10%) Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK-ILTP 152 LR Y+ + S +P V L ++ + Y A+ + N I+ P ++ S ++ P Sbjct: 115 LRNYNATLDSKNPFVLL--ENSGQRVYVAQSGLIG-PNGIDTPAGRAKYSYQSDNYVMQP 171 Query: 153 TT---PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209 + L +K + + +T + E V+ NN+ + + G++ + Sbjct: 172 GQKKLEVPLTYKQEDGVTITKTFTFTEGKYPISVNYNINNTSGK---AWNGQLFAQLKRD 228 Query: 210 ATNTFGVQE-GFIAV---LG------DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYW 259 ++ G+ + G I++ LG D + K+ D + + W+GI Y+ Sbjct: 229 SSKDPGMADKGAISMATYLGGAWGTPDDDYNKLKFKDFNDGDLKAASD-KGWVGIVQHYF 287 Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 S + P +F QF + + + ++ + + K T L+AG K+ ++ Sbjct: 288 VSAWTPQ---NFTGQF-FSREKAGDHFIGMNSEQFMVPAAKQKDITATLYAGPKDQDSLL 343 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 P +D+G+ + I+K +F ++ + ++GN+G +I+ T+ VKL + Sbjct: 344 E-----VAPGLNKTVDYGFLWPISKVLFAVLEGIHKVIGNWGWSIIALTLLVKLALMWFS 398 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K Y S A M+ I P++ L+E+ ++ Q+ M+ +YK +NP+AGC PILLQ+P+ Sbjct: 399 NKSYYSMAKMRAIAPRLQALKEEHGDDRMKMSQE-MMAIYKEEQVNPMAGCLPILLQMPI 457 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F A+Y V+ S+E+RHAP+ WI+DL++ DP I P++M Sbjct: 458 FLALYWVLVESIELRHAPWILWIQDLSSMDPWFIL-------------------PMLMGA 498 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 SMF Q SP P D QA ++ ++P++F + FPAGL++YW+ +N+ ++ QQ ++ K Sbjct: 499 SMFAQQMFSPQPTDPMQAKVMRFLPIIFTLFMLFFPAGLVLYWTVNNLFTMAQQYIVNK 557 >gi|194367815|ref|YP_002030425.1| putative inner membrane protein translocase component YidC [Stenotrophomonas maltophilia R551-3] gi|254778165|sp|B4SPG0|OXAA_STRM5 RecName: Full=Inner membrane protein oxaA gi|194350619|gb|ACF53742.1| 60 kDa inner membrane insertion protein [Stenotrophomonas maltophilia R551-3] Length = 571 Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 137/501 (27%), Positives = 238/501 (47%), Gaps = 56/501 (11%) Query: 84 LKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWN 143 L G + D L + SP V LL+ + + Y A + S N +P ++ Sbjct: 92 LDGGRVLDAELLQFPQTKDEGSPPVRLLT-EDPAHPYSAISGWASEDKNTPVPGADGF-- 148 Query: 144 LISGKILTPTTP-----------IKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSI 191 K++ T I V+ + + +RT+++ + Y + D V+N Sbjct: 149 ----KLVGDTKDFVLAKGQNELQIPFVWTADSGVTIKRTLTVSRNEYAVRFKDEVSNTGA 204 Query: 192 DQ-----IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 R R + + T ++F G DK + + D + N + Sbjct: 205 APWNGYVYRTLDRTPTILSRSMTNPDSFSF-NGATWYDNDKKYQRRAFKDYLEDGTLNQN 263 Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTN 306 + WL + ++ + +IP K+ + H ++ G +A+ A T+ PG+S +T Sbjct: 264 ITGGWLAMLQHHFFTAWIPQKDQTAHYVLSQVA-GRDLIEARGPA--FTVAPGQSTSTEA 320 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNFGIA 363 L+ G K I + +P + ++D+ F +A + +F +++ + LVGN+G A Sbjct: 321 RLWVGPKLVNLIAKED----VPGLDRVVDYSRFSMMAVIGQGLFWVLNQVHKLVGNWGWA 376 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ V +KL+ +PL+ QY S A M+ QP+I +L+E++ Q Q AM++LYK Sbjct: 377 IVGLVVLLKLVLYPLSATQYKSGAKMRRFQPRIAQLKERYGDDR-QKFQTAMMELYKKEK 435 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 INP+ GC PIL+Q+P+FFA+Y V+ S+E+R AP++GWI+DL A DP I Sbjct: 436 INPMGGCLPILIQMPIFFALYWVLVESVELRQAPWFGWIQDLTARDPYFIL--------- 486 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P+I M+ K++P P D Q ++ +MP+VF ++ P+GL++YW Sbjct: 487 ----------PVINVAVMWFTQKLTPAPGMDPMQQKMMQFMPLVFGVMMAFMPSGLVLYW 536 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 + + ++QQ + K HG E Sbjct: 537 VVNGGLGLLQQWWMTKRHGGE 557 >gi|297171723|gb|ADI22715.1| preprotein translocase subunit YidC [uncultured verrucomicrobium HF0500_27H16] Length = 653 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 105/326 (32%), Positives = 182/326 (55%), Gaps = 21/326 (6%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLS------DGHARY--QAKFSANEITILPGKSI 302 W+ + ++++A P K T+ + K G + Y +F N + PG+S+ Sbjct: 322 WVAVRNQFFAVSLAPDKPTTGVVKGKVFDLGTLDHRGESEYGVHGQFGLNTDMLTPGQSL 381 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 T L+AG KE + + K + ++++ +G+F +K + MLM + V N+G Sbjct: 382 THEFNLYAGPKELKRLSNLSK-AGMKHQDLVMQFGFFGLFSKLLLMLMQMLHGFVHNWGW 440 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI++ T+ +KLLF+PL K S M+ IQP + E++ K+K PQ +Q+ + +L++ + Sbjct: 441 AIIIMTILIKLLFWPLTAKSASSMKRMQTIQPLMKEIQAKYKDK-PQKMQQEVAKLFREN 499 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP AGC PIL+Q+P+F ++ ++ + E+R A F+ W+ DL + P +F +P Sbjct: 500 KVNPAAGCLPILIQMPIFLGLFFMLRSAAELRFAEFF-WVSDL--SQPERMFHWGVQIPI 556 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMS--PPPAD---KGQAMILNWMPVVFVFALSSFPAG 537 F + PI+M ++MF QM+M+ PP AD K QA + ++P +F+F L F +G Sbjct: 557 LGEYF---NLLPILMGITMFYQMRMTPIPPGADDMQKMQAKMFRFLPFIFLFMLYGFSSG 613 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563 L++YW+ N++SIVQQ + K E Sbjct: 614 LVLYWTVQNILSIVQQTITNKRKDTE 639 >gi|38502850|sp|O51829|OXAA_BUCMP RecName: Full=Membrane protein oxaA gi|2754805|gb|AAC04234.1| inner membrane protein [Buchnera aphidicola (Myzus persicae)] Length = 240 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 92/236 (38%), Positives = 148/236 (62%), Gaps = 21/236 (8%) Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 E L P ++ +D+GW +F+++P+F L++ +++ N+G +I+L T +K++ +PL K Sbjct: 18 EMKLVAPNLDLTVDYGWLWFLSQPLFKLLTIINSIINNWGFSIILITFIMKIITYPLTKS 77 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 QYVS + ++ +QPKI E++E F + ++ Q+ MI LYK INPL G P+ +Q+PVF Sbjct: 78 QYVSMSKIRALQPKIKEIKEAFSDNKQRISQE-MIILYKKEKINPLGGFLPVFIQMPVFL 136 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 ++Y ++ S+E+RHAPF WIKDL++ D PFY + PIIM L+M Sbjct: 137 SLYYMLIGSVELRHAPFVLWIKDLSSQD-----------PFY--------VLPIIMGLTM 177 Query: 502 -FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 FIQ S +D Q I+N+MPV+F FP+GL++Y+ SN+++I+QQ I Sbjct: 178 FFIQKTSSNNISDPIQKKIMNFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQKFI 233 >gi|329118137|ref|ZP_08246849.1| YidC/Oxa1 family membrane protein insertase [Neisseria bacilliformis ATCC BAA-1200] gi|327465797|gb|EGF12070.1| YidC/Oxa1 family membrane protein insertase [Neisseria bacilliformis ATCC BAA-1200] Length = 544 Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 134/461 (29%), Positives = 217/461 (47%), Gaps = 51/461 (11%) Query: 114 SNTKNAYFAELDYV-----STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 +N Y A+ D + S + ++ + L +GK ++L A+ + Sbjct: 96 NNQNGVYIAQSDLIDETGRSLTQGLSFKSAKKQYALENGK-----AQVRLTATTASGLEI 150 Query: 169 ERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 +T + + YL + V N S ++ + R++R A + + VL Sbjct: 151 AKTYTFTQGSYLIDVRFDVANRSGKPLKAAAAYRVVRDSKTPAGQGYFMSSYTGPVLYTP 210 Query: 228 SLVEQKYS------DIEKSSISNFHESNS---WLGISDKYWASVFI--PSKETSFHSQFK 276 QK S D +K +E + W+GIS Y+ S +I P S + Sbjct: 211 EGKFQKVSFSDLDDDFQKGRDQAEYERQTQSGWVGISQHYFFSAWILQPKDGASICAAAG 270 Query: 277 YLSDGHAR----YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 D R Y A SA E + G S + L+AG + + L E+ Sbjct: 271 CRIDIKRRDGGLYTAGVSAAEPELPAGASQSYAAKLYAGPQTTAELGKIADHL-----EL 325 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + D+G ++ A +F LM + L GN+G AI+L TV VK++ +PL Y S A M+ + Sbjct: 326 VKDYGRVHWPATALFWLMDKLHGLTGNWGWAIVLLTVIVKIILYPLNNASYKSMAKMRAV 385 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PK++ L++++ +Q+AM+Q+YK INPL GC P+LLQIP+F +Y I S+E Sbjct: 386 APKLEALKKQYGDDR-MAMQQAMMQMYKDEKINPLGGCLPMLLQIPIFIGLYWAIFSSVE 444 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +R AP+ GWI DL+ DP I P++M+ +M Q ++PPP+ Sbjct: 445 LRQAPWLGWITDLSRHDPWFIL-------------------PVLMTATMMFQTTLNPPPS 485 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 D QA ++ MP+VF FPAGL++Y+ +N+++I QQ Sbjct: 486 DPMQAKMMKIMPLVFSVMFFFFPAGLVLYYVVNNILTIAQQ 526 >gi|237756916|ref|ZP_04585388.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237690917|gb|EEP60053.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 515 Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 80/225 (35%), Positives = 144/225 (64%), Gaps = 21/225 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 ID+G+F + KP+F+L+ + Y+ V N+G+AI++ TV ++++ FPL K + M ++ Sbjct: 308 IDFGFFGILGKPLFLLLHFIYDFVHNWGLAIIVLTVLLRIVLFPLNHKSLKAMKKMADLA 367 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++++L++K+ + P Q L++ +++LY NP++GC PIL QIP+F A+Y V+ +++E+ Sbjct: 368 PEMEKLKKKYAKDP-QKLREEIMKLYAEAGANPMSGCLPILAQIPIFIALYNVLMVTVEL 426 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++APF WIKDL+ D P+Y + PI+M LSM +Q ++ P +D Sbjct: 427 KNAPFMLWIKDLSDKD-----------PYY--------VLPILMGLSMVVQQFIT-PISD 466 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K Q MI+ + VF F +FP+GL++YW +N++ ++Q ++ K Sbjct: 467 KNQRMIMYILAGVFTFMFMNFPSGLVLYWLTNNILGLIQSVIVNK 511 >gi|315928320|gb|EFV07635.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 500 Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 108/331 (32%), Positives = 176/331 (53%), Gaps = 46/331 (13%) Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQ-KYSDIEKSSISNFHESNSWLGISDKYWASVF 263 ++P A +++ V V+ +K +E K D+EK +N S D+Y+A+ F Sbjct: 202 YRPNIAVDSYTVHGAL--VMDNKETIETYKDGDVEKDESANNVVMTSAF---DRYYATFF 256 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL-FAGAKEFPTIHHYE 322 Y D AN+ I+ S + G+KE + + Sbjct: 257 -------------YNFDKPLNVAISKDANQNPIVFAYSDNEFKAGGYIGSKEHVILRSID 303 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 PR E ++++GWF FIAKPMF +++ + +GN+G AI++ T+ V+++ FPL K Sbjct: 304 -----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNWGWAIVVMTLIVRIILFPLTYKS 358 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 +S +K++ PK+ ++RE++K PQ + M++LYK H NP++GC PILLQIP+FFA Sbjct: 359 MISMNKLKDLAPKMKDIRERYK-GDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFA 417 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 IY+V+ ++E++ AP+ WI DL+ DP Y I PI+M +MF Sbjct: 418 IYRVLLNAIELKAAPWAFWIHDLSVMDP------------YF-------ILPILMGATMF 458 Query: 503 IQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 +Q ++P D QA I+ ++PV+F F+LS Sbjct: 459 LQQLITPMTIQDPMQAKIMKFLPVIFTFSLS 489 >gi|148654185|ref|YP_001281278.1| putative inner membrane protein translocase component YidC [Psychrobacter sp. PRwf-1] gi|148573269|gb|ABQ95328.1| protein translocase subunit yidC [Psychrobacter sp. PRwf-1] Length = 566 Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 99/327 (30%), Positives = 176/327 (53%), Gaps = 33/327 (10%) Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + ++D E ++ S+ W+GI Y+ S + P+ +F QF + + + ++ Sbjct: 258 KDFNDGELTAASD----KGWVGIVQHYFVSAWTPN---NFTGQF-FSREKAGDHFIGMNS 309 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I + K T L+AG K+ ++ P +D+G+ + I+K +F ++ Sbjct: 310 EPIVVPANKQKDVTATLYAGPKDQESLIE-----VAPGLNKTVDYGFLWPISKVLFAILE 364 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + ++GN+G +I+ T+ VK+ + K Y S A M+ I P++ L+E+ ++ Sbjct: 365 GIHKVIGNWGWSIIALTLLVKIALMWFSNKSYYSMAKMRAIAPRLQALKEEHGDDRMKMS 424 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ M+ +YK +NP+AGC PILLQ+P+F A+Y V+ S+E+RHAP+ WI+DL+A DP Sbjct: 425 QE-MMAIYKEEQVNPMAGCLPILLQMPIFLALYWVLVESVELRHAPWILWIQDLSAMDPW 483 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 I P++M SMF Q SP P D QA ++ ++P++F + Sbjct: 484 FIL-------------------PMLMGASMFAQQMFSPQPTDPMQAKVMKFLPIIFTLFM 524 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW+ +N+ ++ QQ ++ K Sbjct: 525 LFFPAGLVLYWTVNNLFTMGQQYIVNK 551 >gi|225849760|ref|YP_002729994.1| inner membrane protein OxaA [Persephonella marina EX-H1] gi|225644791|gb|ACO02977.1| inner membrane protein OxaA [Persephonella marina EX-H1] Length = 537 Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 90/264 (34%), Positives = 152/264 (57%), Gaps = 27/264 (10%) Query: 303 TTTNFLFAGAKEFPTI----HHYEKDLAIP-RFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 + F F G K + + Y+K+ I ID+G+F + KP+F++M + Y+ + Sbjct: 289 SVEGFFFGGPKLYSLLGDITEKYKKEWNIDLSLRESIDFGFFGILGKPLFLIMHFIYDYI 348 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+ I++ TV ++++ FPL K + M ++ P+I +L++K+ Q PQ LQ+ M++ Sbjct: 349 HNWGLTIIILTVLLRIVLFPLNHKSLKAMKKMADLAPEIKKLQKKY-QKDPQKLQEEMMK 407 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LY H NP++GC PI+ QIP+F A+Y V+ +++E++ PF W++DLA D Sbjct: 408 LYAEHGTNPMSGCLPIVAQIPIFIALYNVLMVTVELKMVPFL-WVQDLADKD-------- 458 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 P+Y I PI+M +SM Q ++ P +DK Q +I+ M VF F +FPAG Sbjct: 459 ---PYY--------ILPILMGVSMIAQQWIT-PSSDKNQKIIMYIMAFVFTFLFMNFPAG 506 Query: 538 LIIYWSWSNVISIVQQAVIMKMHG 561 L++YW +N++ I Q ++ K G Sbjct: 507 LVLYWLTNNILGIGQSFIVNKQMG 530 >gi|187918308|ref|YP_001883871.1| putative inner membrane protein translocase component YidC [Borrelia hermsii DAH] gi|254772751|sp|B2S0E5|OXAA_BORHD RecName: Full=Inner membrane protein oxaA gi|119861156|gb|AAX16951.1| 60 kDa inner membrane protein YidC [Borrelia hermsii DAH] Length = 545 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 112/329 (34%), Positives = 181/329 (55%), Gaps = 33/329 (10%) Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 S W+G KY+ + SKE + + +FK ++ F N++ K+I+ T + Sbjct: 233 SPKWVGSGTKYFEV--LVSKE-NMNVEFK----QESKILKAFILNKV---GNKNISDTFY 282 Query: 308 LFAGAKEFPTIHHYEKD------LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 ++AG K+ + + K+ L+ F M ++ YFI PM ++M FYN++ N+G Sbjct: 283 IYAGPKDNGYLDLFNKEDLNSFGLSNVEFGMSVEKSLLYFIQVPMQLIMQIFYNVIPNWG 342 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 ++IM T+ V++L FPL K + +TA + +QPK+ E++ KFK P + L + M +LY+ Sbjct: 343 LSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKNDPKR-LNEEMGKLYRE 401 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGIL 480 +NPL GC+PILLQ+PVFFA+Y +++ +R A F GWI DL+ D I Sbjct: 402 EGVNPLGGCFPILLQLPVFFALYGLVNNFFLLRGASFIPGWIDDLSIGD--------SIY 453 Query: 481 PFYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG----QAMILNWMPVVFVFALSSF 534 F FM + I P IM ++ I +S + K Q ++ MP++F F L Sbjct: 454 YFGYKVFMWTDIRILPFIMMVTQLISTIISSNVSFKSLGSQQKILYFGMPIMFFFILYDM 513 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+GL+IYW +N+ +I+QQ I KM+ +E Sbjct: 514 PSGLLIYWITTNIFTILQQYYI-KMNVSE 541 >gi|289662287|ref|ZP_06483868.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667652|ref|ZP_06488727.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 574 Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 126/504 (25%), Positives = 230/504 (45%), Gaps = 61/504 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLS----PSNTKNAYFAELDYVSTANNIELPN 137 + L G D L + +P+ L P N + + +E V Sbjct: 100 LKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDAAHPYNATSGWASEHSPVPGVGGFRAEQ 159 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNS---IDQ 193 T + L G+ T + V+ N + RT +L+ Y I D V N S + Sbjct: 160 PGTAFELAKGQ---DTLVVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSGAPWNG 216 Query: 194 IRFSPRGRIMRHKPQTATNT----------FGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 F R+ + TN + QEG+ + + D Sbjct: 217 YVFRKLSRVPTILSRGMTNPDSFSFNGATWYSPQEGY---------ERRAFKDYMNDGGL 267 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ + ++ + +IP K+ + L+ R A+ T+ PG++ + Sbjct: 268 NRQITGGWMALLQHHFFTAWIPQKD---QASLYVLNQDGPRDVAELRGPAFTVAPGQTAS 324 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNF 360 T L+ G K I + + + ++D+ F +A + +F ++S+ ++ + N+ Sbjct: 325 TEARLWVGPKLVGLIAKED----VKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNW 380 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+ V ++L +PL+ QY S A M+ QP++ +L+E++ + Q+A ++L+K Sbjct: 381 GWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQPRLAQLKERYGDDRVKY-QQATMELFK 439 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 INP+ GC P+L+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL A DP + IL Sbjct: 440 KEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGWIQDLTARDP------YFIL 493 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLI 539 P +++ I M+ K++P P D QA ++ +MP+VF ++ PAGL+ Sbjct: 494 P-----LLNISI--------MWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLV 540 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW + + ++ Q +++ HG + Sbjct: 541 LYWVVNGGLGLLIQWWMIRQHGEK 564 >gi|32265611|ref|NP_859643.1| putative inner membrane protein translocase component YidC [Helicobacter hepaticus ATCC 51449] gi|38502920|sp|Q7VJY0|OXAA_HELHP RecName: Full=Inner membrane protein oxaA gi|32261659|gb|AAP76709.1| conserved hypothetical membrane protein [Helicobacter hepaticus ATCC 51449] Length = 591 Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 96/254 (37%), Positives = 149/254 (58%), Gaps = 28/254 (11%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + G KE+ + E L ++++G F AKP+F+L+ Y Y+L GN+G AI+L T Sbjct: 342 YIGPKEYHELQGIENTLTD-----VVEYGRITFFAKPLFLLLEYLYDLCGNWGWAIVLLT 396 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + V+++ +PL K VS +K++ PK+ +L+ ++K P Q LQ M+ LYK H NPL Sbjct: 397 LIVRIVLYPLTYKGMVSMQKLKDLAPKMKDLQTRYKDDP-QKLQIHMMDLYKKHGANPLG 455 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+A DP Y Sbjct: 456 GCLPLILQIPVFFAIYRVLHNAVELKSSAWILWITDLSAIDP------------YF---- 499 Query: 489 HVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV--FVFALSSFPAGLIIYWSWS 545 + P++M +SM+I K++P D Q I +P V F + FPAGL++YW+ + Sbjct: 500 ---VLPVLMGVSMYISQKLTPSNFTDPMQEKIFKMLPWVFTIFFIIFPFPAGLVLYWTIN 556 Query: 546 NVISIVQQAVIMKM 559 NV SI+QQ I K+ Sbjct: 557 NVFSIIQQISINKI 570 >gi|319789453|ref|YP_004151086.1| membrane protein insertase, YidC/Oxa1 family [Thermovibrio ammonificans HB-1] gi|317113955|gb|ADU96445.1| membrane protein insertase, YidC/Oxa1 family [Thermovibrio ammonificans HB-1] Length = 490 Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 152/558 (27%), Positives = 254/558 (45%), Gaps = 92/558 (16%) Query: 10 AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSP 69 ++ L+++IV +Q F+ E+K +Q +P +Y+ + D + + Sbjct: 12 SLILALLIVIGFQFFF------HRGEEKKELQ---KPTSA-KTYS---LQDVPSSKRLGE 58 Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 V ++ P L AQF +N + L V + L+SP + + + + Sbjct: 59 LVTVETP-------LYTAQFSTVNGKLVKLTVKKYN--AQLVSPISKELGVYP---LTTV 106 Query: 130 ANNIELPNSNTVWNLI-SGKILTPT-TPIKLVFKNANNILFERTISLDEHYLFKIVDTVT 187 A N EL N S K L T P KL F T L + +FK V T Sbjct: 107 AANPELSKVLVDLNTTPSAKELKVTKAPAKLTF----------TGKLPDGRVFKKVFTFY 156 Query: 188 NNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLV---EQKYSDIEKSSIS 243 NS R + ++ + QT V E + +G V ++K ++ I Sbjct: 157 PNSY---RIDFKAQLKGARLQTIVGPDIKVNEAHTSRMGHIGPVIETQEKVIRLKPEEIK 213 Query: 244 NFHESNS--WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 F N+ W G DKY+ + K+T F + + K + + ++ Sbjct: 214 GFMSFNNVLWAGEEDKYF---LMAVKDTDFTATVE-----------KVGPKDTLV---RN 256 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 + + G KE + D AI D+G F F+AKP+ + + V N+G Sbjct: 257 FVGSGIFYGGPKELHQLEPLGMDSAI-------DFGIFGFLAKPLLKFFLFLHKFVPNWG 309 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 + I+L + +K+L PLA K YVS M+ + PK++EL++++ PQ LQ+ ++LY+ Sbjct: 310 LDIILFVLIIKILLHPLAHKSYVSMKKMQELAPKLEELKKRYGND-PQKLQEETMKLYQE 368 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NP +GC P+LLQIP+FFA+Y++ ++E++ A F WI DL+ D Sbjct: 369 MGVNPASGCLPMLLQIPIFFALYEIFLNAVELKGASFL-WIPDLSQPD------------ 415 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 H I P++M LSM +Q ++ P +K Q I M V+F ++FPAGL++Y Sbjct: 416 -------HTYILPVLMGLSMIVQQLLT-PTTNKQQQKIFILMAVIFTVMFATFPAGLVLY 467 Query: 542 WSWSNVISIVQQAVIMKM 559 W +NVI+ +Q +I+K+ Sbjct: 468 WFTNNVITAIQNFIILKI 485 >gi|15605744|ref|NP_213121.1| hypothetical protein aq_175 [Aquifex aeolicus VF5] gi|38502858|sp|O66561|OXAA_AQUAE RecName: Full=Inner membrane protein oxaA gi|2982916|gb|AAC06534.1| hypothetical protein aq_175 [Aquifex aeolicus VF5] Length = 502 Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 98/284 (34%), Positives = 156/284 (54%), Gaps = 30/284 (10%) Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 +Y G YQ L K ++ + FL+ G K TI+ KD A R L+D Sbjct: 230 RYFFKGAKDYQKHIVYK--VKLGDKFVSLSTFLYDGEK---TIYLGAKDYARLRELGLVD 284 Query: 336 ---WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 WG I KP+F+ + + Y G++ ++I++ T V++ FPL K VS ++ + Sbjct: 285 TLDWGTLKIIVKPLFLFLYWIYEHTGSWVLSILVLTFIVRIFLFPLGYKSVVSMQKLQEL 344 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PK++++++K+K P + +Q+ M++LY NP+AGC PILLQIP+FFA+YKV+ I+++ Sbjct: 345 APKMEKIKQKYKDDPVK-MQEEMMKLYAETGFNPMAGCLPILLQIPIFFALYKVLIITVD 403 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 ++ + F WI LA DP I P+IM L+M +Q KM+P P Sbjct: 404 LKVSSFL-WIPSLADKDPYYIL-------------------PVIMGLTMILQQKMTPSP- 442 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 D QA++ V F +FPAGL++YW+ +NV +I+Q +I Sbjct: 443 DPKQALVGYITSVAFTLLFINFPAGLVLYWTLNNVFNIIQNYLI 486 >gi|78776724|ref|YP_393039.1| putative inner membrane protein translocase component YidC [Sulfurimonas denitrificans DSM 1251] gi|78497264|gb|ABB43804.1| protein translocase subunit yidC [Sulfurimonas denitrificans DSM 1251] Length = 536 Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 90/249 (36%), Positives = 146/249 (58%), Gaps = 26/249 (10%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + G K + T+H + P I++GWF F +KP+F L+ + + L+GN+G +I+ T Sbjct: 290 YIGQKRYKTLHAIK-----PILTNAIEYGWFTFASKPLFQLLMWLHGLIGNWGWSIVALT 344 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 V ++++ +PL K VS MK+I P++ L+ K+K PQ + A++ +YK H NPL Sbjct: 345 VLIRVVLYPLTYKGMVSMQKMKDIAPQVKALQAKYK-GDPQRMNAAVMDMYKKHGANPLG 403 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+LLQIPVFFAIY+V+ ++E++ AP+ W+ DL+ D T + Sbjct: 404 GCLPMLLQIPVFFAIYRVLLNAVELQGAPWMLWVNDLSRMDSTFVL-------------- 449 Query: 489 HVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 PI+M SM+ Q K++P D Q I ++P++F F +FP+GL++YW +N+ Sbjct: 450 -----PILMGASMYYQQKLTPSNFTDPLQEKIFKFLPIIFTFFFITFPSGLVLYWFVNNM 504 Query: 548 ISIVQQAVI 556 SI QQ ++ Sbjct: 505 FSIGQQFIV 513 >gi|21233657|ref|NP_639574.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|38503060|sp|Q8P338|OXAA_XANCP RecName: Full=Inner membrane protein oxaA gi|21115530|gb|AAM43456.1| 60kDa inner-membrane protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 573 Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 126/504 (25%), Positives = 225/504 (44%), Gaps = 61/504 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLS----PSNTKNAYFAELDYVSTANNIELPN 137 + L G D L + P+ L P N + + +E V Sbjct: 99 LKLDGRSVLDAELLQFPQTKDGTEPVKLLTEDAAHPYNATSGWASERSPVPGVGGFRAEQ 158 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNS---IDQ 193 T + L G+ T + V+ N + R +L Y I D V N S + Sbjct: 159 PGTTFELAKGQ---NTLVVPFVWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNG 215 Query: 194 IRFSPRGRIMRHKPQTATNT----------FGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 F R+ + TN + QEG+ + + D Sbjct: 216 YVFRKLSRVPTILSRGMTNPDSFSFNGATWYSPQEGY---------ERRAFKDYMDDGGL 266 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ + ++ + +IP K+ + S + DG R A+ T+ PG+S + Sbjct: 267 NRQITGGWVALLQHHFFTAWIPQKDQA--SLYVLAQDG-PRDVAELRGPAFTVAPGQSAS 323 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNF 360 T L+ G K + + + + ++D+ F +A + +F ++S+ ++ + N+ Sbjct: 324 TEARLWVGPKLVSLLAKED----VKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNW 379 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+ V ++L +PL+ QY S A M+ QP++ +L+E++ Q Q+A ++L+K Sbjct: 380 GWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQPRLAQLKERYGDDR-QKYQQATMELFK 438 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 INP+ GC P+L+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL A DP I Sbjct: 439 KEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGWIQDLTARDPYFIL------ 492 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLI 539 P++ M+ K++P P D QA ++ +MP+VF ++ PAGL+ Sbjct: 493 -------------PVLNIAIMWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLV 539 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW + + ++ Q +++ HG + Sbjct: 540 LYWVVNGGLGLLIQWWMIRQHGEK 563 >gi|66770623|ref|YP_245385.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. campestris str. 8004] gi|81303430|sp|Q4UNK8|OXAA_XANC8 RecName: Full=Inner membrane protein oxaA gi|66575955|gb|AAY51365.1| 60 kDa inner-membrane protein [Xanthomonas campestris pv. campestris str. 8004] Length = 573 Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 124/504 (24%), Positives = 223/504 (44%), Gaps = 61/504 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLS----PSNTKNAYFAELDYVSTANNIELPN 137 + L G D L + P+ L P N + + +E V Sbjct: 99 LKLDGRSVLDAELLQFPQTKDGTEPVKLLTEDAAHPYNATSGWASERSPVPGVGGFRAEQ 158 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNS---IDQ 193 T + L G+ T + V+ N + R +L Y I D V N S + Sbjct: 159 PGTTFELAKGQ---NTLVVPFVWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNG 215 Query: 194 IRFSPRGRIMRHKPQTATNT----------FGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 F R+ + TN + QEG+ + + D Sbjct: 216 YVFRKLSRVPTILSRGMTNPDSFSFNGATWYSPQEGY---------ERRAFKDYMDDGGL 266 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ + ++ + +IP K+ + L+ R A+ T+ PG+S + Sbjct: 267 NRQITGGWVALLQHHFFTAWIPQKD---QASLYVLAQDGPRDVAELRGPAFTVAPGQSAS 323 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNF 360 T L+ G K + + + + ++D+ F +A + +F ++S+ ++ + N+ Sbjct: 324 TEARLWVGPKLVSLLAKED----VKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNW 379 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+ V ++L +PL+ QY S A M+ QP++ +L+E++ Q Q+A ++L+K Sbjct: 380 GWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQPRLAQLKERYGDDR-QKYQQATMELFK 438 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 INP+ GC P+L+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL A DP I Sbjct: 439 KEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGWIQDLTARDPYFIL------ 492 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLI 539 P++ M+ K++P P D QA ++ +MP+VF ++ PAGL+ Sbjct: 493 -------------PVLNIAIMWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLV 539 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW + + ++ Q +++ HG + Sbjct: 540 LYWVVNGGLGLLIQWWMIRQHGEK 563 >gi|224437877|ref|ZP_03658824.1| putative inner membrane protein translocase component YidC [Helicobacter cinaedi CCUG 18818] gi|313144326|ref|ZP_07806519.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129357|gb|EFR46974.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 599 Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 92/254 (36%), Positives = 152/254 (59%), Gaps = 28/254 (11%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + GAK + + +++L ++++G F AKP+F+L+ Y Y+L GN+G AI+L T Sbjct: 337 YIGAKFYKVLQGIDENLT-----GVVEYGRITFFAKPLFLLLEYLYDLCGNWGWAIVLLT 391 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + V+++ +PL + VS +K++ PK+ EL+ ++K P Q LQ M+ LYK H NP+ Sbjct: 392 LIVRVVLYPLTYRGMVSMQKLKDLAPKMKELQARYKDDP-QKLQIHMMDLYKKHGANPIG 450 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+A DP Y Sbjct: 451 GCLPLILQIPVFFAIYRVLHNAVELKSSAWILWIDDLSAIDP------------YF---- 494 Query: 489 HVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV--FVFALSSFPAGLIIYWSWS 545 + P++M LSM++ +++P D Q I +P V F + FPAGL++YW+ + Sbjct: 495 ---VLPVLMGLSMYVSQRLTPSNFTDPMQEKIFKMLPWVFTIFFIIFPFPAGLVLYWTVN 551 Query: 546 NVISIVQQAVIMKM 559 N+ SI+QQ +I K+ Sbjct: 552 NIFSIIQQMLINKV 565 >gi|109946792|ref|YP_664020.1| putative inner membrane protein translocase component YidC [Helicobacter acinonychis str. Sheeba] gi|109714013|emb|CAJ99021.1| inner-membrane protein [Helicobacter acinonychis str. Sheeba] Length = 546 Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 165/579 (28%), Positives = 272/579 (46%), Gaps = 76/579 (13%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRI----EEMNNERKNIQTVKQPN--QVDNSYAAVL 57 N +AIALS + + + F+ P E E N T PN NS AA Sbjct: 8 NLRLILAIALSFLFITLYSYFFQKPDKTTPKETAKQEAANNNTALNPNAPTTQNSSAAQA 67 Query: 58 IDDRAQALSMS---PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-------SNSPI 107 I + ++S ++E+ + I + LK ++ +G+ VS + P+ Sbjct: 68 IPQESLLSTISFEHAKIEIDSLGRIKQVYLKNKKYLTPKEKGFLEHVSHLFSSKENTQPL 127 Query: 108 VTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 + L P N E+ ++ T NN S + S L P + L ++ ++ Sbjct: 128 LKEL-PLLGDNLKPLEVRFLDPTLNNKAFNTSYSA----SKTTLGPNEQLILT-QDLGDL 181 Query: 167 LFERTISL--DEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAV 223 +T++ D HY +I NN I P I ++P +++ G + Sbjct: 182 TIIKTLTFYDDLHYDLQIAFKSPNNII------PNYVITNGYRPVADLDSYTF-SGVLLE 234 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 DK + +K D + I F SN +L D+Y+ ++ F + L D Sbjct: 235 NNDKKI--EKIEDKDAKEIKRF--SNIRFLSSVDRYFTTLLFTDNPQGFEA----LIDSE 286 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 + N + + K+ T + + G K++ ++ P +I++G F Sbjct: 287 TG-----TKNPLGFISLKNEATLHG-YIGPKDYRSLKAIS-----PMLTDVIEYGLITFF 335 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS +K + PK+ EL+EK Sbjct: 336 AKGVFVLLDYLYQFVGNWGWAIILLTIVVRIILYPLSYKGMVSMQKLKELAPKMKELQEK 395 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI Sbjct: 396 YK-GEPQKLQANMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWI 454 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 DL+ DP + ILP ++ M H + P M+ D QA I Sbjct: 455 HDLSIMDP------YFILPLFMGASMYWHQSVTPNTMT--------------DPMQAKIF 494 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++P++F L +FPAGL++YW +NV+S++QQ +I K+ Sbjct: 495 KFLPLLFTLFLITFPAGLVLYWITNNVLSVLQQLIINKV 533 >gi|21245084|ref|NP_644666.1| inner membrane protein translocase component YidC [Xanthomonas axonopodis pv. citri str. 306] gi|38503062|sp|Q8PEH7|OXAA_XANAC RecName: Full=Inner membrane protein oxaA gi|21110818|gb|AAM39202.1| 60 kDa inner-membrane protein [Xanthomonas axonopodis pv. citri str. 306] Length = 574 Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 126/504 (25%), Positives = 233/504 (46%), Gaps = 61/504 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLS----PSNTKNAYFAELDYVSTANNIELPN 137 + L G D L + +P+ L P N + + +E V Sbjct: 100 LKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDPAHPYNATSGWASEHSPVPGVGGFRAEQ 159 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNS---IDQ 193 T +++ G+ T + V+ + + RT +L+ Y I D V N S + Sbjct: 160 PGTTFDMAKGQ---NTLVVPFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNG 216 Query: 194 IRFSPRGRIMRHKPQTATNT----------FGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 F R+ + TN + QEG+ + + D Sbjct: 217 YVFRKLSRVPTILSRGMTNPDSFSFNGATWYSPQEGY---------ERRAFKDYMDDGGL 267 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ + ++ + +IP K+ + S + DG R A+ T+ PG++ + Sbjct: 268 NRQITGGWVALLQHHFFTAWIPQKDQA--SLYVLAQDG-PRDVAELRGPAFTVAPGQTAS 324 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNF 360 T L+ G K I + + + ++D+ F +A + +F ++S+ ++ + N+ Sbjct: 325 TEARLWVGPKLVSLIAKED----VKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNW 380 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+ V ++L +PL+ QY S A M+ QP++ +L+E++ + Q+A ++L+K Sbjct: 381 GWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQPRLAQLKERYGDDRVKY-QQATMELFK 439 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 INP+ GC P+L+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL A DP + IL Sbjct: 440 KEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGWIQDLTARDP------YFIL 493 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLI 539 P +++ I M+ K++P P D QA ++ +MP+VF ++ PAGL+ Sbjct: 494 P-----LLNISI--------MWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLV 540 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW + + ++ Q +++ HG + Sbjct: 541 LYWVVNGGLGLLIQWWMIRQHGEK 564 >gi|325915704|ref|ZP_08178009.1| protein translocase subunit yidC [Xanthomonas vesicatoria ATCC 35937] gi|325538121|gb|EGD09812.1| protein translocase subunit yidC [Xanthomonas vesicatoria ATCC 35937] Length = 574 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 124/504 (24%), Positives = 229/504 (45%), Gaps = 61/504 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTL----LSPSNTKNAYFAELDYVSTANNIELPN 137 + L G D L + +P+ L + P N + + +E V Sbjct: 100 LKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDAVHPYNATSGWASEHSPVPGVGGFRAEQ 159 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNS---IDQ 193 + + L G+ T + V+ N + RT +L+ Y I D V N S + Sbjct: 160 PGSTFELAKGQ---NTLVVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSGAPWNG 216 Query: 194 IRFSPRGRIMRHKPQTATNT----------FGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 F R+ + TN + QEG+ + + D Sbjct: 217 YVFRKLSRVPTILSRGMTNPDSFSFNGATWYSPQEGY---------ERRAFKDYMDDGGL 267 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ + ++ + +IP K+ + S + DG R A+ T+ PG++ + Sbjct: 268 NRQITGGWVALLQHHFFTAWIPQKDQA--SLYVLAQDG-PRDVAELRGPAFTVAPGQTAS 324 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNF 360 T L+ G K I + + + ++D+ F +A + +F ++S+ ++ + N+ Sbjct: 325 TEARLWVGPKLVSLIAKED----VKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNW 380 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G +I+ V ++L +PL+ QY S A M+ QP++ +L+E++ + Q+A ++L+K Sbjct: 381 GWSIIGLVVLLRLALYPLSAAQYKSGAKMRRFQPRLAQLKERYGDDRVK-YQQATMELFK 439 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 INP+ GC P+L+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL A DP I Sbjct: 440 KEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGWIQDLTARDPYFIL------ 493 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLI 539 P++ M+ K++P P D QA ++ +MP+VF ++ PAGL+ Sbjct: 494 -------------PVLNIAIMWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLV 540 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW + + ++ Q +++ HG + Sbjct: 541 LYWVVNGGLGLLIQWWMIRQHGEK 564 >gi|325926222|ref|ZP_08187580.1| Preprotein translocase subunit YidC [Xanthomonas perforans 91-118] gi|325543404|gb|EGD14829.1| Preprotein translocase subunit YidC [Xanthomonas perforans 91-118] Length = 574 Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 126/504 (25%), Positives = 232/504 (46%), Gaps = 61/504 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLS----PSNTKNAYFAELDYVSTANNIELPN 137 + L G D L + +P+ L P N + + +E V Sbjct: 100 LKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDPAHPYNATSGWASEHSPVPGVGGFRAEQ 159 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNS---IDQ 193 T + + G+ T + V+ + + RT +L+ Y I D V N S + Sbjct: 160 PGTTFEMAKGQ---NTLVVPFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNG 216 Query: 194 IRFSPRGRIMRHKPQTATNT----------FGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 F R+ + TN + QEG+ + + D Sbjct: 217 YVFRKLSRVPTILSRGMTNPDSFSFNGATWYSPQEGY---------ERRAFKDYMDDGGL 267 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ + ++ + +IP K+ + S + DG R A+ T+ PG++ + Sbjct: 268 NRQITGGWVALLQHHFFTAWIPQKDQA--SLYVLAQDG-PRDVAELRGPAFTVAPGQTAS 324 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNF 360 T L+ G K I + + + ++D+ F +A + +F ++S+ ++ + N+ Sbjct: 325 TEARLWVGPKLVSLIAKED----VKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNW 380 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+ V ++L +PL+ QY S A M+ QP++ +L+E++ + Q+A ++L+K Sbjct: 381 GWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQPRLAQLKERYGDDRVK-YQQATMELFK 439 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 INP+ GC P+L+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL A DP + IL Sbjct: 440 KEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGWIQDLTARDP------YFIL 493 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLI 539 P +++ I M+ K++P P D QA ++ +MP+VF ++ PAGL+ Sbjct: 494 P-----LLNISI--------MWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLV 540 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW + + ++ Q +++ HG + Sbjct: 541 LYWVVNGGLGLLIQWWMIRQHGEK 564 >gi|294627440|ref|ZP_06706024.1| inner membrane protein translocase component YidC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598261|gb|EFF42414.1| inner membrane protein translocase component YidC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 574 Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 124/504 (24%), Positives = 231/504 (45%), Gaps = 61/504 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLS----PSNTKNAYFAELDYVSTANNIELPN 137 + L G D L + +P+ L P N + + +E V Sbjct: 100 LKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDPAHPYNATSGWASERSPVPGVAGFRAEQ 159 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNS---IDQ 193 T + + G+ T + V+ +++ RT +L+ Y I D V N S + Sbjct: 160 PGTTFEMAKGQ---NTLVVPFVWNGPDDVSIRRTFTLERGRYAISIKDEVINKSGAPWNG 216 Query: 194 IRFSPRGRIMRHKPQTATNT----------FGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 F R+ + TN + QEG+ + + D Sbjct: 217 YVFRKLSRVPTILSRGMTNPDSFSFNGATWYSPQEGY---------ERRAFKDYMDDGGL 267 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ + ++ + +IP K+ + L+ R A+ T+ PG++ + Sbjct: 268 NRQITGGWVALLQHHFFTAWIPQKD---QASLYVLAQDGPRDVAELRGPAFTVAPGQTAS 324 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNF 360 T L+ G K I + + + ++D+ F +A + +F ++S+ ++ + N+ Sbjct: 325 TEARLWVGPKLVSLIAKED----VKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNW 380 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+ V ++L +PL+ QY S A M+ QP++ +L+E++ + Q+A ++L+K Sbjct: 381 GWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQPRLAQLKERYGDDRVK-YQQATMELFK 439 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 INP+ GC P+L+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL A DP + IL Sbjct: 440 KEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGWIQDLTARDP------YFIL 493 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLI 539 P +++ I M+ K++P P D QA ++ +MP+VF ++ PAGL+ Sbjct: 494 P-----LLNISI--------MWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLV 540 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW + + ++ Q +++ HG + Sbjct: 541 LYWVVNGGLGLLIQWWMIRQHGEK 564 >gi|294665120|ref|ZP_06730423.1| inner membrane protein translocase component YidC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605121|gb|EFF48469.1| inner membrane protein translocase component YidC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 574 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 124/504 (24%), Positives = 230/504 (45%), Gaps = 61/504 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLS----PSNTKNAYFAELDYVSTANNIELPN 137 + L G D L + +P+ L P N + + +E V Sbjct: 100 LKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDPAHPYNATSGWASERSPVPGVAGFRAEQ 159 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNS---IDQ 193 T + + G+ T + V+ + + RT +L+ Y I D V N S + Sbjct: 160 PGTTFEMAKGQ---NTLVVPFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNG 216 Query: 194 IRFSPRGRIMRHKPQTATNT----------FGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 F R+ + TN + QEG+ + + D Sbjct: 217 YVFRKLSRVPTILSRGMTNPDSFSFNGATWYSPQEGY---------ERRAFKDYMDDGGL 267 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ + ++ + +IP K+ + L+ R A+ T+ PG++ + Sbjct: 268 NRQITGGWVALLQHHFFTAWIPQKD---QASLYVLAQDGPRDVAELRGPAFTVAPGQTAS 324 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNF 360 T L+ G K I + + + ++D+ F +A + +F ++S+ ++ + N+ Sbjct: 325 TEARLWVGPKLVSLIAKED----VKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNW 380 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+ V ++L +PL+ QY S A M+ QP++ +L+E++ + Q+A ++L+K Sbjct: 381 GWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQPRLAQLKERYGDDRVK-YQQATMELFK 439 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 INP+ GC P+L+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL A DP + IL Sbjct: 440 KEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGWIQDLTARDP------YFIL 493 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLI 539 P +++ I M+ K++P P D QA ++ +MP+VF ++ PAGL+ Sbjct: 494 P-----LLNISI--------MWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLV 540 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW + + ++ Q +++ HG + Sbjct: 541 LYWVVNGGLGLLIQWWMIRQHGEK 564 >gi|317011581|gb|ADU85328.1| putative inner membrane protein translocase component YidC [Helicobacter pylori SouthAfrica7] Length = 548 Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 91/233 (39%), Positives = 141/233 (60%), Gaps = 21/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS Sbjct: 321 PMLTDAIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQ 380 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+E++K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 381 KLKELAPKMKELQEEYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 439 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+ DP I P++M SM+ + Sbjct: 440 YNAVELKSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSV 480 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D QA I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 481 TPNTMTDPMQAKIFKLLPLLFTLFLITFPAGLVLYWTTNNILSVLQQLIINKV 533 >gi|298369729|ref|ZP_06981046.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sp. oral taxon 014 str. F0314] gi|298282286|gb|EFI23774.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sp. oral taxon 014 str. F0314] Length = 544 Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 116/391 (29%), Positives = 192/391 (49%), Gaps = 40/391 (10%) Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYS 235 YL + VT+ I + R++R + + Q G + + + +S Sbjct: 161 YLINVRFDVTDAGGKPINLTANYRVVRDSSKPEGQGYFTQSYVGPVVYTPEGQFEKVTFS 220 Query: 236 DIE------KSSISNFHESNS-WLGISDKYWASVFIPSKE------TSFHSQFKYLSDGH 282 D++ K+ H++NS WLG+ + ++ + +I + + Q G Sbjct: 221 DLDDDFKSGKNKAEYVHKTNSGWLGMIEHHFMATWILQPKDGQTVCAAGDCQIDIKRRGD 280 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y A S + G + + L+AG + + L + + D+G ++ Sbjct: 281 NLYSAGVSVPMAAVAAGGKASVSMNLYAGPQTTSVLAGIADKLQLAK-----DYGKVHWF 335 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A P+F L++ + L+GN+G +I+ T+ VK + +PL Y S A M+ + PK+ ++EK Sbjct: 336 ASPLFWLLNKLHELIGNWGWSIIALTIIVKAVLYPLTNASYRSMAKMRAVAPKLQAIKEK 395 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q+AM+Q+YK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 396 YGDDR-MAQQQAMMQMYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWI 454 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ D PFY I P+IM+ +MF Q ++PPP D QA ++ Sbjct: 455 TDLSRPD-----------PFY--------ILPLIMAGTMFAQTFLNPPPTDPMQAKMMKI 495 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MP+VF FPAGL++YW +N+++I QQ Sbjct: 496 MPMVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 526 >gi|289548954|ref|YP_003473942.1| membrane protein insertase, YidC/Oxa1 family [Thermocrinis albus DSM 14484] gi|289182571|gb|ADC89815.1| membrane protein insertase, YidC/Oxa1 family [Thermocrinis albus DSM 14484] Length = 498 Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 92/251 (36%), Positives = 148/251 (58%), Gaps = 29/251 (11%) Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 L+ GAK++ L + ++D+G I KP+F+ M + Y + ++ +I++ Sbjct: 261 LYMGAKDY-------GRLRVLGLSEVLDYGTLRIIVKPLFVFMYWIYEHLHSWVFSILVL 313 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 T+ V+L+ FPL K VS + + PK+ ELREK+K P + Q+ +++LY NP+ Sbjct: 314 TLLVRLIVFPLTYKSTVSMMRLSELAPKMQELREKYKDDPVK-FQEELMKLYAEAGFNPM 372 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 +GC PILLQIP+FFA+YKV++I+ E++ A F WI LA D P+YL Sbjct: 373 SGCLPILLQIPIFFALYKVLTITAELQLASFL-WIPSLAQKD-----------PYYL--- 417 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 PI+M ++M Q +SP P DK Q +++ VVF F +SFP+GL++YW+++N+ Sbjct: 418 -----LPILMGVTMIAQQWVSPAP-DKSQNLMMYVTSVVFTFLFASFPSGLVLYWTFNNI 471 Query: 548 ISIVQQAVIMK 558 ++IVQ VI + Sbjct: 472 LNIVQSYVIKR 482 >gi|325294818|ref|YP_004281332.1| Membrane protein oxaA [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065266|gb|ADY73273.1| Membrane protein oxaA [Desulfurobacterium thermolithotrophum DSM 11699] Length = 490 Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 159/310 (51%), Gaps = 47/310 (15%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 W G DKY+ + K+T F + + N T++ G + + Sbjct: 222 KWAGEEDKYF---LMAIKDTDFPVSIE-------------NINSHTVIKG--FIGSGIFY 263 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 G KE + D AI D+G F F+AKP + + + N+G+ I++ T+ Sbjct: 264 GGPKELNQLESLGMDKAI-------DFGIFGFLAKPFLKFFLFLHQFIPNWGLVIIVLTI 316 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +K++ PL K + S M+ + PK++E++ K+K + PQ L + M++LYK +NP+ G Sbjct: 317 LIKIILHPLTHKSFESMKKMQELAPKLEEIKNKYKDN-PQKLNEEMMKLYKEAGVNPMGG 375 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C PILLQIP+FFA+Y++ ++E++ A F W+ DL+ D T I Sbjct: 376 CLPILLQIPIFFALYEIFLNAVELKGASFL-WVPDLSMPDSTFIM--------------- 419 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 PI+M SM +Q K++ P + Q I M VVF F +SFPAGL++YW +N+I+ Sbjct: 420 ----PILMGASMILQQKLT-PTTNPQQEKIFMIMAVVFTFMFASFPAGLVLYWLTNNIIT 474 Query: 550 IVQQAVIMKM 559 +Q +I +M Sbjct: 475 AIQNFIINRM 484 >gi|21326646|gb|AAL30086.1| 60Kd inner-membrane protein [Xanthomonas campestris pv. campestris] Length = 573 Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 125/504 (24%), Positives = 225/504 (44%), Gaps = 61/504 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS----NTKNAYFAELDYVSTANNIELPN 137 + L G D L + P+ L + N + + +E V Sbjct: 99 LKLDGRSVLDAELLQFPQTKDGTEPVKLLTEDAAHSYNATSGWASERSPVPGVGGFRAEQ 158 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNS---IDQ 193 T + L G+ T + V+ N + R +L Y I D V N S + Sbjct: 159 PGTTFELAKGQ---NTLVVPFVWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNG 215 Query: 194 IRFSPRGRIMRHKPQTATNT----------FGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 F R+ + TN + QEG+ + + D Sbjct: 216 YVFRKLSRVPTILSRGMTNPDSFSFNGATWYSPQEGY---------ERRAFKDYMDDGGL 266 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ + ++ + +IP K+ + S + DG R A+ T+ PG+S + Sbjct: 267 NRQITGGWVALLQHHFFTAWIPQKDQA--SLYVLAQDG-PRDVAELRGPAFTVAPGQSAS 323 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNF 360 T L+ G K + + + + ++D+ F +A + +F ++S+ ++ + N+ Sbjct: 324 TEARLWVGPKLVSLLAKED----VKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNW 379 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+ V ++L +PL+ QY S A M+ QP++ +L+E++ Q Q+A ++L+K Sbjct: 380 GWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQPRLAQLKERYGDDR-QKYQQATMELFK 438 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 INP+ GC P+L+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL A DP I Sbjct: 439 KEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGWIQDLTARDPYFIL------ 492 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLI 539 P++ M+ K++P P D QA ++ +MP+VF ++ PAGL+ Sbjct: 493 -------------PVLNIAIMWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLV 539 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW + + ++ Q +++ HG + Sbjct: 540 LYWVVNGGLGLLIQWWMIRQHGEK 563 >gi|294056003|ref|YP_003549661.1| membrane protein insertase, YidC/Oxa1 family [Coraliomargarita akajimensis DSM 45221] gi|293615336|gb|ADE55491.1| membrane protein insertase, YidC/Oxa1 family [Coraliomargarita akajimensis DSM 45221] Length = 604 Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 91/270 (33%), Positives = 156/270 (57%), Gaps = 26/270 (9%) Query: 295 TILPGKSITTTNFLFAGAKEFP---TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 TI G + + G KEF ++ +Y+ + ++ +G+F FI+K + M Sbjct: 330 TIAAGSAKALDFEYYVGPKEFKRLQSLGNYQ--------DKIMQFGFFSFISKLLLSFMY 381 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++LV N+G++I++ T+ +K++F+PL K S M IQ + EL+EKFK + PQ + Sbjct: 382 LIHSLVPNWGLSIVIMTICIKMIFWPLTAKASKSQKRMAKIQGPMAELKEKFKDN-PQKM 440 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ ++L++ H +NPLAGC P+ +Q+P+F ++ ++ + E+R F W+ DL+ D Sbjct: 441 QQETLKLFREHRVNPLAGCLPLFVQMPIFLGLFYMLRTASELRFESFL-WVSDLSQPDTM 499 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVF 529 F++ GF V I P+IM ++MF+QM M P P AD Q I ++P VF+ Sbjct: 500 ----------FHIAGF-PVNILPLIMGVTMFLQMSMMPVSPTADPAQQKIFKFLPFVFLI 548 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 L +F +GL++YW+ N+++IVQQ + M Sbjct: 549 FLYNFSSGLVLYWTVQNILTIVQQKITNAM 578 >gi|78050041|ref|YP_366216.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123583682|sp|Q3BLZ7|OXAA_XANC5 RecName: Full=Inner membrane protein oxaA gi|78038471|emb|CAJ26216.1| preprotein translocase subunit YidC [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 574 Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 126/504 (25%), Positives = 231/504 (45%), Gaps = 61/504 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLS----PSNTKNAYFAELDYVSTANNIELPN 137 + L G D L + P+ L P N + + +E V Sbjct: 100 LKLDGRSVLDAELLQFPQTKDGTEPVSLLTEDPAHPYNATSGWASEHSPVPGVGGFRAEQ 159 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNS---IDQ 193 T + + G+ T + V+ + + RT +L+ Y I D V N S + Sbjct: 160 PGTTFEMAKGQ---NTLVVPFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNG 216 Query: 194 IRFSPRGRIMRHKPQTATNT----------FGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 F R+ + TN + QEG+ + + D Sbjct: 217 YVFRKLSRVPTILSRGMTNPDSFSFNGATWYSPQEGY---------ERRAFKDYMDDGGL 267 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ + ++ + +IP K+ + S + DG R A+ T+ PG++ + Sbjct: 268 NRQITGGWVALLQHHFFTAWIPQKDQA--SLYVLAQDG-PRDVAELRGPAFTVAPGQTAS 324 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNF 360 T L+ G K I + + + ++D+ F +A + +F ++S+ ++ + N+ Sbjct: 325 TEARLWVGPKLVNLIAKED----VKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNW 380 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+ V ++L +PL+ QY S A M+ QP++ +L+E++ + Q+A ++L+K Sbjct: 381 GWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQPRLAQLKERYGDDRVK-YQQATMELFK 439 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 INP+ GC P+L+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL A DP + IL Sbjct: 440 KEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGWIQDLTARDP------YFIL 493 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLI 539 P +++ I M+ K++P P D QA ++ +MP+VF ++ PAGL+ Sbjct: 494 P-----LLNISI--------MWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLV 540 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW + + ++ Q +++ HG + Sbjct: 541 LYWVVNGGLGLLIQWWMIRQHGEK 564 >gi|325922758|ref|ZP_08184492.1| protein translocase subunit yidC [Xanthomonas gardneri ATCC 19865] gi|325546754|gb|EGD17874.1| protein translocase subunit yidC [Xanthomonas gardneri ATCC 19865] Length = 573 Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 122/504 (24%), Positives = 225/504 (44%), Gaps = 61/504 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLS----PSNTKNAYFAELDYVSTANNIELPN 137 + L G D L + +P+ L P N + + +E V Sbjct: 99 LKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDAAHPYNATSGWASEHSPVPGVGGFRAEQ 158 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNS---IDQ 193 + L G+ + + V+ N + RT +L+ Y I D V N S + Sbjct: 159 PGAAFELARGQ---NSLVVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSGAPWNG 215 Query: 194 IRFSPRGRIMRHKPQTATNT----------FGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 F R+ + TN + QEG+ + + D Sbjct: 216 YVFRKLSRVPTILSRGMTNPDSFSFNGATWYSPQEGY---------ERRAFKDYMDDGGL 266 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ + ++ + +IP K+ + L+ R A+ T+ PG++ + Sbjct: 267 NRQITGGWVALLQHHFFTAWIPQKD---QASLYVLNQDGPRDVAELRGPAFTVAPGQTAS 323 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNF 360 T L+ G K I + + + ++D+ F +A + +F ++S+ ++ + N+ Sbjct: 324 TEARLWVGPKLVSLIAKED----VKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNW 379 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+ V ++L +PL+ QY S A M+ QP++ +L+E++ + Q+A ++L+K Sbjct: 380 GWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQPRLAQLKERYGDDRVK-YQQATMELFK 438 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 INP+ GC P+L+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL A DP I Sbjct: 439 KEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGWIQDLTARDPYFIL------ 492 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLI 539 P++ M+ K++P P D QA ++ +MP+VF ++ PAGL+ Sbjct: 493 -------------PVLNIAIMWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLV 539 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW + + ++ Q +++ HG + Sbjct: 540 LYWVVNGGLGLLIQWWMIRQHGEK 563 >gi|320536044|ref|ZP_08036102.1| membrane protein insertase, YidC/Oxa1 family protein [Treponema phagedenis F0421] gi|320147094|gb|EFW38652.1| membrane protein insertase, YidC/Oxa1 family protein [Treponema phagedenis F0421] Length = 609 Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 125/419 (29%), Positives = 219/419 (52%), Gaps = 36/419 (8%) Query: 166 ILFERTISLDEHYLFKI-VDTVTNNSIDQIRFSPRGRIMRHKPQTAT--NTFGVQEGFIA 222 IL +R I ++Y+F++ V + S+ + F+ G ++ PQ NT E Sbjct: 184 ILAKRYIFYPDNYMFELQVSINGDESLKGLNFNSAGYTLKTPPQIGPDWNTADKYEYRTF 243 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + K + K ++ S+ + W+ IS KY+ ++ IP + S F L+ + Sbjct: 244 MSFSKEKEKTKSYTLKTDSVQEITDPVGWVSISGKYFTTIVIPQDSNTIQSTF-LLAPKN 302 Query: 283 ARYQAKFSANEIT----ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEM--- 332 A Q+ N+I I+ G +I ++ G P +Y IP F++ Sbjct: 303 A--QSPIQDNQIALIRKIIAGSAIIDIYHVYIG----PCTENYLSPYNIPSKNPFQLDNI 356 Query: 333 LID-----WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ID G Y + + ++ +FY ++ N+G+AI+L T+ +KLLF+PL KK +V++ Sbjct: 357 RIDSVAASGGLLYPLEVGLKWVLQFFYKIIPNWGVAIILVTLLIKLLFYPLTKKSFVASQ 416 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ +QP++ ++ K+K + PQ L + M + YK NPL+GC +L+Q+P FA+Y++ Sbjct: 417 RMQELQPQMQTIQAKYKNN-PQKLNEEMAKFYKEAGYNPLSGCLTLLVQMPFLFAMYRLF 475 Query: 448 SISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + E R A F WI DL+ D +I+ L +PF+ G+ + + PI+ +S + K Sbjct: 476 NNYFEFRGAMFIPHWIPDLSIGD--SIWKLPFTVPFF--GWTDLRLLPILYVVSQIVFSK 531 Query: 507 MSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK-MH 560 ++ PPA + Q M+L +MPV F F + P+GL++YW+ N++++VQQ I + MH Sbjct: 532 ITQPPATEQQNSSMKMMLYFMPVFFFFLFYNAPSGLLVYWTAMNLMTLVQQLFIKQTMH 590 >gi|289826408|ref|ZP_06545520.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 485 Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 119/451 (26%), Positives = 205/451 (45%), Gaps = 61/451 (13%) Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS------ 112 D A + +K L +IN +G + L Y ++ SN P L + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLLETTPQFIY 108 Query: 113 -----------PSNTKNA----YFAELDYVSTA---NNIELPNSNTVWNLISGKILTPTT 154 P N N Y E D A N +++P + T +G T T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTD---AAGNTFTKT- 164 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQ 208 VFK + Y + +V N + S G++ + H+ Sbjct: 165 ---FVFKRGD-------------YAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHR-D 207 Query: 209 TATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 T ++ F + G D+ + K+ I + N W+ + +Y+A+ +IP Sbjct: 208 TGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPR 267 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + + F + G+ + A + + PG++ T+ L+ G P I +A Sbjct: 268 NDGT--NNFYTANLGNGIVAIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA 321 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S Sbjct: 322 -PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSM 380 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F A+Y + Sbjct: 381 AKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYM 439 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 + S+E+RHAPF WI DL+A DP I + Sbjct: 440 LMGSIELRHAPFALWIHDLSAQDPYYILPIL 470 >gi|213622860|ref|ZP_03375643.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 470 Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 119/451 (26%), Positives = 205/451 (45%), Gaps = 61/451 (13%) Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS------ 112 D A + +K L +IN +G + L Y ++ SN P L + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLLETTPQFIY 108 Query: 113 -----------PSNTKNA----YFAELDYVSTA---NNIELPNSNTVWNLISGKILTPTT 154 P N N Y E D A N +++P + T +G T T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTD---AAGNTFTKT- 164 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQ 208 VFK + Y + +V N + S G++ + H+ Sbjct: 165 ---FVFKRGD-------------YAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHR-D 207 Query: 209 TATNTFGVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 T ++ F + G D+ + K+ I + N W+ + +Y+A+ +IP Sbjct: 208 TGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPR 267 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + + F + G+ + A + + PG++ T+ L+ G P I +A Sbjct: 268 NDGT--NNFYTANLGNGIVAIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA 321 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S Sbjct: 322 -PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSM 380 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F A+Y + Sbjct: 381 AKMRMLQPKIQAMRERLGDD-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYM 439 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 + S+E+RHAPF WI DL+A DP I + Sbjct: 440 LMGSIELRHAPFALWIHDLSAQDPYYILPIL 470 >gi|330447274|ref|ZP_08310924.1| 60Kd inner membrane family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491465|dbj|GAA05421.1| 60Kd inner membrane family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 230 Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 98/239 (41%), Positives = 147/239 (61%), Gaps = 22/239 (9%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GW FIA P+ L+S + +VGN+G+AI++ T+ V+ L +PL K QY S A M+ +QP Sbjct: 12 DYGWSSFIANPLHDLLSLIHGVVGNWGVAIIILTLIVRGLMYPLTKAQYTSMAKMRMLQP 71 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 K+ LRE Q + + M+ LYK INPL GC P+LLQ+P+F A+Y V+++S E+R Sbjct: 72 KLQALRESCGDDR-QRMSQEMMALYKKEQINPLGGCLPLLLQMPIFIALYTVLNLSTELR 130 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-AD 513 +APF+GWI++L+A D P+Y + PI+M +SMF K SP D Sbjct: 131 NAPFFGWIQNLSAQD-----------PYY--------VLPILMGISMFFIQKNSPSTVTD 171 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 Q I+ +MPV+F FPAGL++YW SN+++++QQ +I + + GL R +S Sbjct: 172 PMQQKIMTFMPVIFTVFFLFFPAGLVLYWLTSNIVTLIQQTIIFRQLEVQ-GLHSRDKS 229 >gi|188996900|ref|YP_001931151.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931967|gb|ACD66597.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 515 Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 83/225 (36%), Positives = 143/225 (63%), Gaps = 21/225 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G+F + KP+F+L+ + Y+ V N+G+AI++ TV ++L+ FPL K + M ++ Sbjct: 308 VDFGFFGILGKPLFLLLHFIYDFVHNWGLAIIVLTVLLRLVLFPLNHKSLKAMKKMADLA 367 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++++L++K+ + P Q LQ+ +++LY NP++GC PIL QIP+F A+Y V+ +++E+ Sbjct: 368 PEMEKLKKKYAKDP-QKLQEEIMKLYAEAGANPMSGCLPILAQIPIFIALYNVLMVTVEL 426 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++APF WIKDL+ D P+Y + PI+M LSM Q ++ P +D Sbjct: 427 KNAPFMLWIKDLSDKD-----------PYY--------VLPILMGLSMVAQQFIT-PSSD 466 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K Q MI+ M VF F +FP+GL++YW +N++ ++Q +I K Sbjct: 467 KNQRMIMYIMAGVFTFMFMNFPSGLVLYWLTNNILGLIQSVIINK 511 >gi|187251668|ref|YP_001876150.1| preprotein translocase subunit [Elusimicrobium minutum Pei191] gi|186971828|gb|ACC98813.1| Pre-protein translocase subunit [Elusimicrobium minutum Pei191] Length = 531 Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 145/516 (28%), Positives = 238/516 (46%), Gaps = 87/516 (16%) Query: 101 VSSNSPIV-TLLSPSNTK--------NAYFAELDYVSTANNIELPNSNTVWNLISGKI-L 150 SNS I T L+PS+ + + A++ + S I+ + ++ G + L Sbjct: 49 TKSNSSITKTALTPSDKQVEEKFYDFSTKVADIKFTSKGAGIK----DYIFKDCVGDVNL 104 Query: 151 TP-------TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVT--NNSIDQIRFSPRGR 201 TP TT +L FK A T +++E Y+ +I T T ++ I+ + S R Sbjct: 105 TPYTEEGFYTTFPRLTFKEAGRTENSITFTVEEGYI-RINKTYTFNDDGINNLSLSIENR 163 Query: 202 IMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDI-----EKSSISNFHESNS----- 250 K QT F G V +KS ++ + E FH + Sbjct: 164 --STKEQTLDQFYFNFGPGIGTVESEKSDNSREMKAVYITQEEGKKFPTFHNRSKEKIED 221 Query: 251 --------WLGISDKYWASVFIPSK-ETSFHSQFKYLSDGHARY-----QAKFSANEITI 296 W G++++Y+ +V IP ++ K + D H R+ +AK + I Sbjct: 222 SVKDGNWIWAGLNNRYFLAVLIPQNWKSGLLETEKVIVDSHPRFFGLLGKAKVEGPMLKI 281 Query: 297 ------LPGKSITT--TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 LP KS T ++F F G K++ T L + I++G+F + K + Sbjct: 282 TVPAMSLPPKSKTVLQSDFYF-GPKDYKTFQTMPYSL-----DKSIEFGFFGALGKMVRW 335 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ Y GN+G+AI++ V ++ L Q+ S+ M+ IQP++ ++E++K Sbjct: 336 VLETLYRFTGNYGVAIIILAVLFQITMLRLTIMQHKSSMVMQKIQPEMKSIQERYKNDQ- 394 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q+AM+ LYK H NP GC P+L+Q+P+F A++ S E+ A F WI DL+A Sbjct: 395 TAQQQAMLALYKKHKFNPFMGCLPLLIQLPIFIALFNAFRTSWELHGAGFVWWITDLSAK 454 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-PADKGQAMILNWMPVVF 527 D PFY + PI+M MFIQ +++ P +D Q +L WMPV+F Sbjct: 455 D-----------PFY--------VLPIVMGGVMFIQQRITAPVGSDPTQTAMLKWMPVIF 495 Query: 528 VFALSSFPAGLIIYWSWSNVISI-VQQAVIMKMHGA 562 F +FPAGL++YW +++IS+ +Q + KM A Sbjct: 496 TFVFINFPAGLVLYWLTNSIISLGIQLYMKRKMAKA 531 >gi|152993157|ref|YP_001358878.1| inner membrane protein translocase component YidC [Sulfurovum sp. NBC37-1] gi|151425018|dbj|BAF72521.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 539 Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 92/257 (35%), Positives = 150/257 (58%), Gaps = 31/257 (12%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + G KE+ + + P I++GWF F++KP F ++ + + L+GN+G AI+L T Sbjct: 291 YIGPKEYNILKNIN-----PELTNTIEFGWFTFLSKPFFKVLLWIHGLIGNWGWAIILFT 345 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + VKL FPL+ K +S +K++ PK+ +L+ K+K P + L M++LYK + NP+ Sbjct: 346 LLVKLTLFPLSYKGMMSMQKLKDLAPKMKDLKAKYKGDPAK-LNAQMMELYKKNGANPMG 404 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW--GWIKDLAAADPTNIFTLFGILPFYLPG 486 GC P++LQIPVFFA+Y+V+ + E++ A W GWI +LA AD P+Y Sbjct: 405 GCLPMILQIPVFFALYRVLLNADELQGAA-WIPGWINNLAVAD-----------PYY--- 449 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF--VFALSSFPAGLIIYWS 543 + P++M +SM+ Q +++P D Q I W PV+ +F + FP+GL++YW Sbjct: 450 -----VLPVLMGISMWFQQRITPNNFTDPLQEKIFKWFPVLMAGMFIIMPFPSGLVLYWV 504 Query: 544 WSNVISIVQQAVIMKMH 560 +N +I QQ VI + + Sbjct: 505 VNNTFTIGQQYVINRAY 521 >gi|213022847|ref|ZP_03337294.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 346 Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 80/247 (32%), Positives = 142/247 (57%), Gaps = 8/247 (3%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 33 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGT--NNFYTANLGNGIV 90 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G P I +A P ++ +D+GW +FI++P Sbjct: 91 AIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 145 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 146 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 205 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 206 D-KQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 264 Query: 466 AAADPTN 472 +A DP + Sbjct: 265 SAQDPIH 271 >gi|111115269|ref|YP_709887.1| putative inner membrane protein translocase component YidC [Borrelia afzelii PKo] gi|216263402|ref|ZP_03435397.1| inner membrane protein OxaA [Borrelia afzelii ACA-1] gi|122956367|sp|Q0SN67|OXAA_BORAP RecName: Full=Inner membrane protein oxaA gi|110890543|gb|ABH01711.1| inner membrane protein [Borrelia afzelii PKo] gi|215980246|gb|EEC21067.1| inner membrane protein OxaA [Borrelia afzelii ACA-1] Length = 544 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 108/324 (33%), Positives = 175/324 (54%), Gaps = 32/324 (9%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W+G S KY+ + SKE + +FK F N ++ K+I+ F++A Sbjct: 237 WIGSSTKYFEV--LVSKE-NMEVEFK----KEKGILKSFIVN--NVINKKNISDKFFIYA 287 Query: 311 GAKEFPTIHHYEKD------LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 G K+ + ++K+ L+ F M ++ +Y I PM M+M FY+++ N+G++I Sbjct: 288 GPKDNRYLDIFDKNSDNTFGLSDIAFGMSVEKSLWYLIQVPMQMVMQVFYDVIPNWGLSI 347 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 + T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M +LYK + Sbjct: 348 IFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKK-LNEEMGRLYKEEGV 406 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFY 483 NPL GC+PI+LQ+P+FFA+Y +++ +R A F GWI DL+ D F Y Sbjct: 407 NPLGGCFPIILQLPIFFALYSLVNNLFLLRGANFIPGWIDDLSIGDSVYHFG----YKLY 462 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-------KGQAMILNWMPVVFVFALSSFPA 536 + + I P IM MF Q+ + ++ Q + MP++F F L + P+ Sbjct: 463 FVSWTDIRILPFIM---MFTQLGSTIVSSNIDLKNLGAQQKFLYFGMPIMFFFILYNMPS 519 Query: 537 GLIIYWSWSNVISIVQQAVIMKMH 560 GL+IYW +N+ +I+QQ I KMH Sbjct: 520 GLLIYWITTNIFTILQQYYI-KMH 542 >gi|218658398|ref|ZP_03514328.1| putative inner membrane protein translocase component YidC [Rhizobium etli IE4771] Length = 125 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 69/120 (57%), Positives = 93/120 (77%) Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F+GWIKDL+A DPT I LFG+LPF P +H+G+WP+IM ++MF+QM+M+P P D QA Sbjct: 1 FFGWIKDLSAPDPTTIVNLFGLLPFEGPALLHLGVWPLIMGITMFVQMRMNPTPPDPTQA 60 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MI NWMP+VF+F L+SFPAGL+IYW+W+N +S+ QQ +IMK HG +I L D L+ F + Sbjct: 61 MIFNWMPLVFMFMLASFPAGLVIYWAWNNTLSVAQQGLIMKRHGVKIELFDNLKGMFRRK 120 >gi|86160773|ref|YP_467558.1| protein translocase subunit yidC [Anaeromyxobacter dehalogenans 2CP-C] gi|123750290|sp|Q2IHR0|OXAA_ANADE RecName: Full=Inner membrane protein oxaA gi|85777284|gb|ABC84121.1| protein translocase subunit yidC [Anaeromyxobacter dehalogenans 2CP-C] Length = 545 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 122/426 (28%), Positives = 206/426 (48%), Gaps = 51/426 (11%) Query: 154 TPIKLVFKNANNILFE-RTISLDEHYLFKIVDTVTNNSID--QIRFSPRGRIMRHKPQ-- 208 P+++V K+A+++ FE R +L F++ ++D + G + P Sbjct: 146 APMRIVAKDASSVTFEGRVGNLAARKTFRVTGKPYELALDVELTGGAGNGTVGVLYPAFM 205 Query: 209 -TATNTFGVQEG----FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVF 263 T + G+ G F+ + +++ ++ + SW G+ Y+ + Sbjct: 206 PPDTKSGGIFSGPPLDFVRPVCRAGTTTERFDLAKEGAPEKLEGQVSWAGVDQHYFVAAV 265 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHHY 321 +P++ + AR K + +P G + + ++AG K+ T+ Y Sbjct: 266 LPAEPVGTCT--------FARGPVKGAGVAALAIPVEGGARKLSLTVYAGPKDLDTLRGY 317 Query: 322 EKDLAIPRFEMLIDWG----WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + FE ID+G +F A+ + +M + +V N+G+AI+L TV V+L+ FP Sbjct: 318 GRG-----FESAIDYGAVAKFFALFARGLLYVMRWLEAIVRNWGVAIILLTVLVRLVLFP 372 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 L K S M+ +QP+I++L+ KF + + A++QLY+ H +NPL GC P+LLQ+ Sbjct: 373 LTYKSMQSMNEMRKLQPEIEKLKAKFGDDR-EKMNLAVMQLYQKHKVNPLGGCLPMLLQM 431 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 PV+FA+Y + S+E+ PF W+KDL A DP I PI M Sbjct: 432 PVWFALYAALQTSVELYREPFL-WMKDLTAHDPYFIL-------------------PIAM 471 Query: 498 SLSMFIQMKMSPPPADKGQA-MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +S F+ K+SP PAD QA M+L + P F + P GL +Y +N++SIVQQ ++ Sbjct: 472 GISSFVMQKLSPQPADNAQAKMMLYFFPGFFTVIMLFVPGGLTLYIFVNNLLSIVQQQLM 531 Query: 557 MKMHGA 562 MK A Sbjct: 532 MKHQRA 537 >gi|71901965|ref|ZP_00684016.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1] gi|71728270|gb|EAO30450.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1] Length = 565 Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 110/421 (26%), Positives = 203/421 (48%), Gaps = 45/421 (10%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNS---IDQIRFSPRGRI----MRHKP 207 + V+ AN + RT + + Y I D + N+ + F R+ + ++ Sbjct: 163 VPFVWTAANGVSIRRTFTFERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRA 222 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 T ++F G + + + D N W+ + ++ + +IP K Sbjct: 223 MTNPDSFSF-NGAVWYSEKGGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQK 281 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK--EFPTIHH---YE 322 + + L+ +R A+ T+ PG+S TT L+ G K E T H + Sbjct: 282 D---QASLYLLAQNGSRDIAELRGPAFTVAPGQSTTTEARLWVGPKLVEQITKEHVKGLD 338 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 + + RF+++ I + +F ++S+ +L+ N+G AI+ V +++ +PL+ Q Sbjct: 339 RVVDYSRFQLMA------LIGQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSAAQ 392 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y S A M+ QP++ +L+E++ + Q Q+AM++LYK INP+ GC+PIL+Q+P+FFA Sbjct: 393 YKSAAKMRKFQPRLQQLKERYGEDR-QKFQQAMMELYKKEKINPMGGCFPILIQMPIFFA 451 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y V+ S+E+R AP+ GWI+DL DP I L I + M+ Sbjct: 452 LYWVLVESVELRQAPWLGWIQDLTTRDPYFILPLLNI-------------------VIMW 492 Query: 503 IQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 K++P PA D ++ MP++F ++ P+GL +YW + ++++ Q +++ H Sbjct: 493 ATQKLTPTPAGMDPIAGKMMQVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIRQH 552 Query: 561 G 561 Sbjct: 553 A 553 >gi|15839369|ref|NP_300057.1| putative inner membrane protein translocase component YidC [Xylella fastidiosa 9a5c] gi|38503220|sp|Q9P9U1|OXAA_XYLFA RecName: Full=Inner membrane protein oxaA gi|9108026|gb|AAF85565.1|AE004083_4 60kDa inner-membrane protein [Xylella fastidiosa 9a5c] Length = 565 Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 110/421 (26%), Positives = 202/421 (47%), Gaps = 45/421 (10%) Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNS---IDQIRFSPRGRI----MRHKP 207 + V+ AN + RT + + Y I D + N + F R+ + ++ Sbjct: 163 VPFVWTAANGVSIRRTFTFERGRYAILIRDEIRNGGETPWNAYVFRKLSRVPIPNILNRA 222 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 T ++F G + + + D N W+ + ++ + +IP K Sbjct: 223 MTNPDSFSF-NGAVWYSEKGGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQK 281 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK--EFPTIHH---YE 322 + + L+ +R A+ T+ PG+S TT L+ G K E T H + Sbjct: 282 D---QASLYLLAQNGSRDIAELRGPAFTVAPGQSTTTEARLWVGPKLVEQITKEHVKGLD 338 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 + + RF+++ I + +F ++S+ +L+ N+G AI+ V +++ +PL+ Q Sbjct: 339 RVVDYSRFQLMA------LIGQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSAAQ 392 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y S A M+ QP++ +L+E++ + Q Q+AM++LYK INP+ GC+PIL+Q+P+FFA Sbjct: 393 YKSAAKMRKFQPRLQQLKERYGEDR-QKFQQAMMELYKKEKINPMGGCFPILIQMPIFFA 451 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y V+ S+E+R AP+ GWI+DL DP I L I + M+ Sbjct: 452 LYWVLVESVELRQAPWLGWIQDLTTRDPYFILPLLNI-------------------VIMW 492 Query: 503 IQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 K++P PA D ++ MP++F ++ P+GL +YW + ++++ Q +++ H Sbjct: 493 ATQKLTPTPAGMDPIAGKMMQVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIRQH 552 Query: 561 G 561 Sbjct: 553 A 553 >gi|221218111|ref|ZP_03589577.1| inner membrane protein OxaA [Borrelia burgdorferi 72a] gi|225548690|ref|ZP_03769737.1| inner membrane protein OxaA [Borrelia burgdorferi 94a] gi|221192059|gb|EEE18280.1| inner membrane protein OxaA [Borrelia burgdorferi 72a] gi|225370720|gb|EEH00156.1| inner membrane protein OxaA [Borrelia burgdorferi 94a] Length = 544 Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 110/325 (33%), Positives = 172/325 (52%), Gaps = 34/325 (10%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK-FSANEITILPGKSITTTNFLF 309 W+G S KY+ + SKE + +FK R K F N + K+I+ F++ Sbjct: 237 WIGSSTKYFGV--LVSKE-NMEVEFK-----KERGTLKSFIINNVR--NKKNISDEFFIY 286 Query: 310 AGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 AG K+ + ++K L F M ++ ++Y I PM M+M FY+++ N+G++ Sbjct: 287 AGPKDNRYLDVFDKRDDNTFGLFDNFFGMSVEKSFWYLIQVPMQMVMQVFYDVIPNWGLS 346 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M +LYK Sbjct: 347 IIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDPKK-LNEEMGRLYKEEG 405 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPF 482 +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 406 VNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFG----YKL 461 Query: 483 YLPGFMHVGIWPIIMSLSMFIQM-------KMSPPPADKGQAMILNWMPVVFVFALSSFP 535 Y + + I P IM MF Q+ M Q + MP++F F L + P Sbjct: 462 YFVSWTDIRILPFIM---MFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMP 518 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 +GL+IYW +N+ +I+QQ I KMH Sbjct: 519 SGLLIYWITTNIFTILQQYYI-KMH 542 >gi|203284351|ref|YP_002222091.1| 60kDa inner-membrane protein [Borrelia duttonii Ly] gi|254772750|sp|B5RLZ9|OXAA_BORDL RecName: Full=Inner membrane protein oxaA gi|201083794|gb|ACH93385.1| 60kDa inner-membrane protein [Borrelia duttonii Ly] Length = 545 Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 107/327 (32%), Positives = 174/327 (53%), Gaps = 35/327 (10%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W+G KY+ + SKE + +FK+ + F N+ L K+++ +++A Sbjct: 236 WVGAGTKYFEV--LVSKE-NMKVEFKH----ENKVLNAFILNK---LDNKNVSDVFYIYA 285 Query: 311 GAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 G ++ + + + L+ F M ++ YF+ PM ++M FYN++ N+G++I Sbjct: 286 GPRDNKYLDIFNQRELNSFGLSNVEFGMSVEKSLLYFLQVPMQLIMQIFYNVIPNWGLSI 345 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 M T+ V++L FPL K + +TA + +QPK+ E++ KFK S P+ L + M +LY+ + Sbjct: 346 MFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFK-SDPKRLNEEMSKLYREEGV 404 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIF-------TL 476 NP+ GC+PILLQ+PVFFA+Y +++ +R A F GWI DL+ D F T Sbjct: 405 NPIGGCFPILLQLPVFFALYGLVNNFFVLRGASFIPGWIDDLSIGDSIYYFGYKVFAWTD 464 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 ILPF I I LS + +S Q + MP++F F L P+ Sbjct: 465 IRILPF---------IMMITQLLSTIVSSNVSFKSLGAQQKFLYFGMPIMFFFILYDMPS 515 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL+IYW +N+ +I+QQ I KM+ +E Sbjct: 516 GLLIYWITTNIFTILQQYYI-KMNLSE 541 >gi|203287885|ref|YP_002222900.1| 60 kDa inner-membrane protein [Borrelia recurrentis A1] gi|254772753|sp|B5RRP5|OXAA_BORRA RecName: Full=Inner membrane protein oxaA gi|201085105|gb|ACH94679.1| 60 kDa inner-membrane protein [Borrelia recurrentis A1] Length = 545 Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 107/327 (32%), Positives = 174/327 (53%), Gaps = 35/327 (10%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W+G KY+ + SKE + +FK+ + F N+ L K+++ +++A Sbjct: 236 WVGAGTKYFEV--LVSKE-NMKVEFKH----ENKVLNAFILNK---LDNKNVSDVFYIYA 285 Query: 311 GAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 G ++ + + + L+ F M ++ YF+ PM ++M FYN++ N+G++I Sbjct: 286 GPRDNKYLDIFNQRELNSFGLSNVEFGMSVEKSLLYFLQVPMQLIMQIFYNVIPNWGLSI 345 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 M T+ V++L FPL K + +TA + +QPK+ E++ KFK S P+ L + M +LY+ + Sbjct: 346 MFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFK-SDPKRLNEEMGKLYREEGV 404 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIF-------TL 476 NP+ GC+PILLQ+PVFFA+Y +++ +R A F GWI DL+ D F T Sbjct: 405 NPIGGCFPILLQLPVFFALYGLVNNFFVLRGASFIPGWIDDLSIGDSIYYFGYKVFAWTD 464 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 ILPF I I LS + +S Q + MP++F F L P+ Sbjct: 465 IRILPF---------IMMITQLLSTIVSSNVSFKSLGSQQKFLYFGMPIMFFFILYDMPS 515 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL+IYW +N+ +I+QQ I KM+ +E Sbjct: 516 GLLIYWITTNIFTILQQYYI-KMNLSE 541 >gi|197124875|ref|YP_002136826.1| hypothetical protein AnaeK_4495 [Anaeromyxobacter sp. K] gi|254772746|sp|B4UKG1|OXAA_ANASK RecName: Full=Inner membrane protein oxaA gi|196174724|gb|ACG75697.1| 60 kDa inner membrane insertion protein [Anaeromyxobacter sp. K] Length = 546 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 122/422 (28%), Positives = 209/422 (49%), Gaps = 51/422 (12%) Query: 154 TPIKLVFKNANNILFE-RTISLDEHYLFKIVDTVTNNSIDQIRFSP---RGRIMRHKPQ- 208 P+++V K+A+++ FE R +L F++ ++D + S G + P Sbjct: 147 APMRIVAKDASSVTFEGRVGNLAARKTFRVTGKPYELALD-VELSGGAGNGTVGVLYPAF 205 Query: 209 --TATNTFGVQEG----FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASV 262 T + G+ G F+ + +++ ++ + SW G+ Y+ + Sbjct: 206 MPPDTKSGGIFSGPPLDFVRPVCRAGTTTERFDLAKEGAPEKLEGQVSWAGVDQHYFVAA 265 Query: 263 FIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG-KSITTTNFLFAGAKEFPTIHHY 321 +P++ + + G A +A + + G + ++ T ++AG K+ T+ Y Sbjct: 266 VLPAEPIGTCTFVRGPVKG-----AGLAALAVPVEGGARKLSLT--VYAGPKDLDTLRGY 318 Query: 322 EKDLAIPRFEMLIDWG----WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + FE ID+G +F A+ + +M + +V N+G+AI+L TV V+L+ FP Sbjct: 319 GRG-----FESAIDYGAVAKFFALFARGLLYVMRWLEAIVRNWGVAIILLTVLVRLVLFP 373 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 L K S M+ +QP+I++L+ KF + + A++QLY+ H +NPL GC P+LLQ+ Sbjct: 374 LTYKSMQSMNEMRKLQPEIEKLKAKFGDDR-EKMNLAVMQLYQKHKVNPLGGCLPMLLQM 432 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 PV+FA+Y + S+E+ PF W+KDL A DP I PI M Sbjct: 433 PVWFALYAALQTSVELYREPFL-WMKDLTAHDPYFIL-------------------PIAM 472 Query: 498 SLSMFIQMKMSPPPADKGQA-MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +S F+ K+SP PAD QA M+L + P F + P GL +Y +N++SIVQQ ++ Sbjct: 473 GISSFVMQKLSPQPADNAQAKMMLYFFPGFFTVIMLFVPGGLTLYIFVNNLLSIVQQQLM 532 Query: 557 MK 558 MK Sbjct: 533 MK 534 >gi|218249421|ref|YP_002374953.1| inner membrane protein OxaA [Borrelia burgdorferi ZS7] gi|226321751|ref|ZP_03797277.1| inner membrane protein OxaA [Borrelia burgdorferi Bol26] gi|254772749|sp|B7J208|OXAA_BORBZ RecName: Full=Inner membrane protein oxaA gi|218164609|gb|ACK74670.1| inner membrane protein OxaA [Borrelia burgdorferi ZS7] gi|226232940|gb|EEH31693.1| inner membrane protein OxaA [Borrelia burgdorferi Bol26] Length = 544 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 110/325 (33%), Positives = 172/325 (52%), Gaps = 34/325 (10%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK-FSANEITILPGKSITTTNFLF 309 W+G S KY+ + SKE + +FK R K F N + K+I+ F++ Sbjct: 237 WIGSSTKYFGV--LVSKE-NMEVEFK-----KERGTLKSFIINNVR--NKKNISDEFFIY 286 Query: 310 AGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 AG K+ + ++K L F M ++ ++Y I PM M+M FY+++ N+G++ Sbjct: 287 AGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVFYDVIPNWGLS 346 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M +LYK Sbjct: 347 IIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDPKK-LNEEMGRLYKEEG 405 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPF 482 +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 406 VNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFG----YKL 461 Query: 483 YLPGFMHVGIWPIIMSLSMFIQM-------KMSPPPADKGQAMILNWMPVVFVFALSSFP 535 Y + + I P IM MF Q+ M Q + MP++F F L + P Sbjct: 462 YFVSWTDIRILPFIM---MFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMP 518 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 +GL+IYW +N+ +I+QQ I KMH Sbjct: 519 SGLLIYWITTNIFTILQQYYI-KMH 542 >gi|224532508|ref|ZP_03673133.1| inner membrane protein OxaA [Borrelia burgdorferi WI91-23] gi|224512580|gb|EEF82956.1| inner membrane protein OxaA [Borrelia burgdorferi WI91-23] Length = 544 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 110/325 (33%), Positives = 172/325 (52%), Gaps = 34/325 (10%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK-FSANEITILPGKSITTTNFLF 309 W+G S KY+ + SKE + +FK R K F N + K+I+ F++ Sbjct: 237 WIGSSTKYFGV--LVSKE-NMEVEFK-----KERGTLKSFIINNVR--NKKNISDEFFIY 286 Query: 310 AGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 AG K+ + ++K L F M ++ ++Y I PM M+M FY+++ N+G++ Sbjct: 287 AGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVFYDVIPNWGLS 346 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M +LYK Sbjct: 347 IIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDPKK-LNEEMGRLYKEEG 405 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPF 482 +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 406 VNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFG----YKL 461 Query: 483 YLPGFMHVGIWPIIMSLSMFIQM-------KMSPPPADKGQAMILNWMPVVFVFALSSFP 535 Y + + I P IM MF Q+ M Q + MP++F F L + P Sbjct: 462 YFVSWTDIRILPFIM---MFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMP 518 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 +GL+IYW +N+ +I+QQ I KMH Sbjct: 519 SGLLIYWITTNIFTILQQYYI-KMH 542 >gi|15594787|ref|NP_212576.1| putative inner membrane protein translocase component YidC [Borrelia burgdorferi B31] gi|38502849|sp|O51398|OXAA_BORBU RecName: Full=Inner membrane protein oxaA gi|2688353|gb|AAB91510.1| inner membrane protein [Borrelia burgdorferi B31] Length = 544 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 110/325 (33%), Positives = 172/325 (52%), Gaps = 34/325 (10%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK-FSANEITILPGKSITTTNFLF 309 W+G S KY+ + SKE + +FK R K F N + K+I+ F++ Sbjct: 237 WIGSSTKYFGV--LVSKE-NMEVEFK-----KERGTLKSFIINNVR--NKKNISDEFFIY 286 Query: 310 AGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 AG K+ + ++K L F M ++ ++Y I PM M+M FY+++ N+G++ Sbjct: 287 AGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVFYDVIPNWGLS 346 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M +LYK Sbjct: 347 IIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDPKK-LNEEMGRLYKEEG 405 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPF 482 +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 406 VNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFG----YKL 461 Query: 483 YLPGFMHVGIWPIIMSLSMFIQM-------KMSPPPADKGQAMILNWMPVVFVFALSSFP 535 Y + + I P IM MF Q+ M Q + MP++F F L + P Sbjct: 462 YFVSWTDIRILPFIM---MFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMP 518 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 +GL+IYW +N+ +I+QQ I KMH Sbjct: 519 SGLLIYWITTNIFTILQQYYI-KMH 542 >gi|224533541|ref|ZP_03674130.1| inner membrane protein OxaA [Borrelia burgdorferi CA-11.2a] gi|224513214|gb|EEF83576.1| inner membrane protein OxaA [Borrelia burgdorferi CA-11.2a] gi|312149425|gb|ADQ29496.1| inner membrane protein OxaA [Borrelia burgdorferi N40] Length = 544 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 110/325 (33%), Positives = 172/325 (52%), Gaps = 34/325 (10%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK-FSANEITILPGKSITTTNFLF 309 W+G S KY+ + SKE + +FK R K F N + K+I+ F++ Sbjct: 237 WIGSSTKYFGV--LVSKE-NMEVEFK-----KERGTLKSFIINNVR--NKKNISDEFFIY 286 Query: 310 AGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 AG K+ + ++K L F M ++ ++Y I PM M+M FY+++ N+G++ Sbjct: 287 AGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVFYDVIPNWGLS 346 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M +LYK Sbjct: 347 IIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDPKK-LNEEMGRLYKEEG 405 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPF 482 +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 406 VNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFG----YKL 461 Query: 483 YLPGFMHVGIWPIIMSLSMFIQM-------KMSPPPADKGQAMILNWMPVVFVFALSSFP 535 Y + + I P IM MF Q+ M Q + MP++F F L + P Sbjct: 462 YFVSWTDIRILPFIM---MFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMP 518 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 +GL+IYW +N+ +I+QQ I KMH Sbjct: 519 SGLLIYWITTNIFTILQQYYI-KMH 542 >gi|149919109|ref|ZP_01907593.1| 60 kDa inner membrane insertion protein [Plesiocystis pacifica SIR-1] gi|149820039|gb|EDM79460.1| 60 kDa inner membrane insertion protein [Plesiocystis pacifica SIR-1] Length = 580 Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 107/322 (33%), Positives = 160/322 (49%), Gaps = 38/322 (11%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS-ANEITILPGKSITTTNFLF 309 W G+ KY+ IPS+ S SDG + +IT+ PG+ + L+ Sbjct: 264 WFGVDSKYFLQAVIPSET---FSGCVVDSDGAGSGMVNTAIGRQITLEPGQQKSYEFGLY 320 Query: 310 AGAK------EFPTIHHYEKDLAIPRFEMLIDWGWF----YFIAKPMFMLMSYFYNLVGN 359 GAK FP E I + IDWGWF ++ M L+ YFY L G Sbjct: 321 LGAKIDSMLGAFPESEGLEAAEGIALTDA-IDWGWFGALSEYLGGMMLALLRYFYGLTGV 379 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G+AI++ TV +KL PL KQY S MK I P++ LREK+K ++ Q+ M L+ Sbjct: 380 WGVAIIMLTVVIKLTLLPLTIKQYRSMRKMKEINPEMQALREKYKDDQVKMNQE-MQALF 438 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 H +PL+GC P+LLQ P++ A+Y ++ +++ H F W+ DL D Sbjct: 439 SRHGTSPLSGCTPMLLQFPIWIALYAMLGAVVDLYHESFL-WLPDLTQPD---------- 487 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNW-MPVVFVFALSSFPAG 537 P+Y I PI M MF+Q M+P P D+ QA ++ W MP VFV + P+G Sbjct: 488 -PYY--------ILPIGMGALMFLQTSMNPNPGGDEMQAKMMKWMMPGVFVVMMLFLPSG 538 Query: 538 LIIYWSWSNVISIVQQAVIMKM 559 L +Y + +S++Q + +K+ Sbjct: 539 LGVYIFANITLSLIQSFIQLKI 560 >gi|28199977|ref|NP_780291.1| putative inner membrane protein translocase component YidC [Xylella fastidiosa Temecula1] gi|182682731|ref|YP_001830891.1| putative inner membrane protein translocase component YidC [Xylella fastidiosa M23] gi|38502965|sp|Q879S3|OXAA_XYLFT RecName: Full=Inner membrane protein oxaA gi|254778174|sp|B2IAR7|OXAA_XYLF2 RecName: Full=Inner membrane protein oxaA gi|28058108|gb|AAO29940.1| 60 kDa inner-membrane protein [Xylella fastidiosa Temecula1] gi|182632841|gb|ACB93617.1| 60 kDa inner membrane insertion protein [Xylella fastidiosa M23] Length = 565 Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 95/338 (28%), Positives = 174/338 (51%), Gaps = 36/338 (10%) Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + D N W+ + ++ + +IP K+ + L+ +R A+ Sbjct: 245 RRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKD---QASLYLLAQNGSRDIAELR 301 Query: 291 ANEITILPGKSITTTNFLFAGAK--EFPTIHH---YEKDLAIPRFEMLIDWGWFYFIAKP 345 T+ PG++ TT L+ G K E T H ++ + RF+++ I + Sbjct: 302 GPAFTVAPGQTTTTEARLWVGPKLVEQITKEHVKGLDRVVDYSRFQLMA------LIGQG 355 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F ++S+ +L+ N+G AI+ V +++ +PL+ QY S A M+ QP++ +L+E++ + Sbjct: 356 LFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSASQYKSAAKMRKFQPRLQQLKERYGE 415 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q Q+AM++LYK INP+ GC+PIL+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL Sbjct: 416 DR-QKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWLGWIQDL 474 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWM 523 DP I L I + M+ K++P PA D ++ M Sbjct: 475 TTRDPYFILPLLNI-------------------VIMWATQKLTPTPAGMDPIAGKMMQVM 515 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P++F ++ P+GL +YW + ++++ Q +++ H Sbjct: 516 PLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIRQHA 553 >gi|119953231|ref|YP_945440.1| putative inner membrane protein translocase component YidC [Borrelia turicatae 91E135] gi|254772754|sp|A1QZM8|OXAA_BORT9 RecName: Full=Inner membrane protein oxaA gi|119862002|gb|AAX17770.1| 60 kDa inner membrane protein YidC [Borrelia turicatae 91E135] Length = 545 Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 109/327 (33%), Positives = 173/327 (52%), Gaps = 35/327 (10%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W+G S KY+ + SKE + + +FK + F N+I S + T +++A Sbjct: 236 WVGSSTKYFEV--LVSKE-NMNVEFK----QENKVLKTFVLNKI---GDTSFSDTFYIYA 285 Query: 311 GAKEFPTIHHYEKD------LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 G ++ + + ++ L+ F M ++ YFI PM ++M FY+++ N+G++I Sbjct: 286 GPRDNGYLDIFNENNLNSFGLSNVEFGMSVEKSLLYFIQVPMQLIMQIFYDVIPNWGLSI 345 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 + T+ V++L FPL K + +TA + +QPK+ E++ KFK P + L + M +LY+ + Sbjct: 346 IFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKNDPKR-LNEEMGKLYREEGV 404 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIF-------TL 476 NPL GC PILLQ+PVFFA+Y +++ +R A F GWI DL+ D F T Sbjct: 405 NPLGGCLPILLQLPVFFALYGLVNNFFLLRGASFIPGWIDDLSIGDSIYYFGYKVFVWTD 464 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 ILPF I I LS I +S Q + MP++F F L P+ Sbjct: 465 IRILPF---------IMMITQLLSTIISSNVSFKNLGSQQKFLYFGMPIMFFFILYDMPS 515 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL+IYW +N+ +I+QQ I KM+ +E Sbjct: 516 GLLIYWITTNIFTILQQYYI-KMNVSE 541 >gi|223888963|ref|ZP_03623554.1| inner membrane protein OxaA [Borrelia burgdorferi 64b] gi|223885779|gb|EEF56878.1| inner membrane protein OxaA [Borrelia burgdorferi 64b] Length = 544 Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 110/325 (33%), Positives = 172/325 (52%), Gaps = 34/325 (10%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK-FSANEITILPGKSITTTNFLF 309 W+G S KY+ + SKE + +FK R K F N + K+I+ F++ Sbjct: 237 WIGSSTKYFGV--LVSKE-NMEVEFK-----KERGTLKSFIINNVR--NKKNISDEFFIY 286 Query: 310 AGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 AG K+ + ++K L F M ++ ++Y I PM M+M FY+++ N+G++ Sbjct: 287 AGPKDNRYLDVFDKRDDNTFGLFNIFFGMSVEKSFWYLIQVPMQMVMQVFYDVIPNWGLS 346 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M +LYK Sbjct: 347 IIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDPKK-LNEEMGRLYKEEG 405 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPF 482 +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 406 VNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFG----YKL 461 Query: 483 YLPGFMHVGIWPIIMSLSMFIQM-------KMSPPPADKGQAMILNWMPVVFVFALSSFP 535 Y + + I P IM MF Q+ M Q + MP++F F L + P Sbjct: 462 YFVSWTDIRILPFIM---MFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMP 518 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 +GL+IYW +N+ +I+QQ I KMH Sbjct: 519 SGLLIYWITTNIFTILQQYYI-KMH 542 >gi|219684221|ref|ZP_03539165.1| inner membrane protein OxaA [Borrelia garinii PBr] gi|219672210|gb|EED29263.1| inner membrane protein OxaA [Borrelia garinii PBr] Length = 544 Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 96/275 (34%), Positives = 154/275 (56%), Gaps = 23/275 (8%) Query: 300 KSITTTNFLFAGAKEFPTIHHYEKD------LAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 K+I+ F++AG K+ + ++K L+ F M ++ +Y I PM M+M F Sbjct: 277 KNISDEFFIYAGPKDNRYLDIFDKSGDNTFGLSDIAFGMSVEKSLWYLIQVPMQMVMQVF 336 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y ++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + Sbjct: 337 YGVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKK-LNE 395 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472 M +LYK +NPL GC+PI+LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 396 EMGRLYKEEGVNPLGGCFPIILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVY 455 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-------KGQAMILNWMPV 525 F Y + + I P IM MF Q+ + ++ Q + MP+ Sbjct: 456 HFG----YKLYFVSWTDIRILPFIM---MFTQLGSTIVSSNLDLKNLGAQQKFLYFGMPI 508 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +F F L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|225549578|ref|ZP_03770544.1| inner membrane protein OxaA [Borrelia burgdorferi 118a] gi|225369855|gb|EEG99302.1| inner membrane protein OxaA [Borrelia burgdorferi 118a] Length = 544 Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 110/325 (33%), Positives = 172/325 (52%), Gaps = 34/325 (10%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK-FSANEITILPGKSITTTNFLF 309 W+G S KY+ + SKE + +FK R K F N + K+I+ F++ Sbjct: 237 WIGSSTKYFGV--LVSKE-NMEVEFK-----KERGTLKSFIINNVR--NKKNISDEFFIY 286 Query: 310 AGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 AG K+ + ++K L F M ++ ++Y I PM M+M FY+++ N+G++ Sbjct: 287 AGPKDNRYLDVFDKRDDNTFGLFDNFFGMSVEKSFWYLIQVPMQMVMQVFYDVMPNWGLS 346 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M +LYK Sbjct: 347 IIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDPKK-LNEEMGRLYKEEG 405 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPF 482 +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 406 VNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFG----YKL 461 Query: 483 YLPGFMHVGIWPIIMSLSMFIQM-------KMSPPPADKGQAMILNWMPVVFVFALSSFP 535 Y + + I P IM MF Q+ M Q + MP++F F L + P Sbjct: 462 YFVSWTDIRILPFIM---MFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMP 518 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 +GL+IYW +N+ +I+QQ I KMH Sbjct: 519 SGLLIYWITTNIFTILQQYYI-KMH 542 >gi|51598696|ref|YP_072884.1| putative inner membrane protein translocase component YidC [Borrelia garinii PBi] gi|81691561|sp|Q661H9|OXAA_BORGA RecName: Full=Inner membrane protein oxaA gi|51573267|gb|AAU07292.1| inner membrane protein [Borrelia garinii PBi] Length = 544 Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 95/275 (34%), Positives = 155/275 (56%), Gaps = 23/275 (8%) Query: 300 KSITTTNFLFAGAKEFPTIHHYEKD------LAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 K+I+ F++AG K+ + ++K L+ F M ++ +Y I PM M+M F Sbjct: 277 KNISDEFFIYAGPKDNRYLDIFDKSGDNTFGLSDIAFGMSVEKSLWYLIQVPMQMVMQVF 336 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + Sbjct: 337 YDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKK-LNE 395 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472 M +LYK +NPL GC+P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 396 EMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVY 455 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-------KGQAMILNWMPV 525 F Y + + I P IM MF Q+ + ++ Q + MP+ Sbjct: 456 NFG----YRLYFVSWTDIRILPFIM---MFTQLGSTIVSSNLDLKNLGAQQKFLYFGMPI 508 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +F F L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|312148357|gb|ADQ31016.1| inner membrane protein OxaA [Borrelia burgdorferi JD1] Length = 544 Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 109/325 (33%), Positives = 172/325 (52%), Gaps = 34/325 (10%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK-FSANEITILPGKSITTTNFLF 309 W+G S KY+ + SKE + +FK R K F N + K+I+ F++ Sbjct: 237 WIGSSTKYFGV--LVSKE-NMEVEFK-----KERGTLKSFIINNVR--NKKNISDEFFIY 286 Query: 310 AGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 AG K+ + ++K L F M ++ ++Y I PM M+M FY+++ N+G++ Sbjct: 287 AGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVFYDVIPNWGLS 346 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ V++L FPL K + +TA + +QP++ EL+ KFK P + L + M +LYK Sbjct: 347 IIFLTIVVRILIFPLTFKGFRATAELSKLQPRMKELQAKFKHDPKK-LNEEMGRLYKEEG 405 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPF 482 +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 406 VNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFG----YKL 461 Query: 483 YLPGFMHVGIWPIIMSLSMFIQM-------KMSPPPADKGQAMILNWMPVVFVFALSSFP 535 Y + + I P IM MF Q+ M Q + MP++F F L + P Sbjct: 462 YFVSWTDIRILPFIM---MFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMP 518 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 +GL+IYW +N+ +I+QQ I KMH Sbjct: 519 SGLLIYWITTNIFTILQQYYI-KMH 542 >gi|220936473|ref|YP_002515372.1| protein translocase subunit YidC [Thioalkalivibrio sp. HL-EbGR7] gi|254778168|sp|B8GRD1|OXAA_THISH RecName: Full=Inner membrane protein oxaA gi|219997783|gb|ACL74385.1| protein translocase subunit YidC [Thioalkalivibrio sp. HL-EbGR7] Length = 557 Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 114/408 (27%), Positives = 204/408 (50%), Gaps = 35/408 (8%) Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + L + + + + +T + VD N+ DQ + R +RH + ++ Sbjct: 171 VPLTWTSEDGVQVTKTYTFRRGDFLINVDHAVRNNSDQPWVGRQYRQIRHGSTPSRESW- 229 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSIS----NFHESNSWLGISDKYWASVFIPSKETSF 271 F+ + + +Y + ++ + W+ I Y+ + ++P + Sbjct: 230 ----FLYTFTGVAYHDGRYEKLSLEDMAGKPLDKDVQGGWISIIQHYFLTAWVPFEHEIN 285 Query: 272 HSQFKYL-SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + L + + + T PG+ T+ + G KE + + P Sbjct: 286 QFYTRVLGTPARPEHIIGMRSEAQTAAPGEETVFTSRFWVGPKEQAALKAIQ-----PGL 340 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ +D+G F+AKP+F ++ + +N+VGN+G AI++ T+ +KL+F+ L++ Y S A M+ Sbjct: 341 ELTVDYGMLSFLAKPLFWVLDWIHNVVGNWGWAIIILTILIKLVFYKLSETSYRSMAKMR 400 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QPK+ +L++++ Q + +A+++LYK INPL GC PIL+QIPVF A+Y V+ S Sbjct: 401 AVQPKMMQLKDRYGDD-KQRMNQALMELYKKEKINPLGGCLPILVQIPVFIALYWVLLES 459 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMR AP+ WI+DL+ DP I PI+M ++M Q K++P Sbjct: 460 VEMRQAPWILWIQDLSVRDPYFIL-------------------PILMGVTMIAQYKLNPA 500 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P D Q ++ +P VF + FPAGL++YW +N++SI QQ I + Sbjct: 501 PMDPIQQKLMMALPFVFTVFFAFFPAGLVLYWFVNNLLSIAQQWYITR 548 >gi|195942021|ref|ZP_03087403.1| putative inner membrane protein translocase component YidC [Borrelia burgdorferi 80a] gi|226321073|ref|ZP_03796615.1| inner membrane protein OxaA [Borrelia burgdorferi 29805] gi|226233483|gb|EEH32222.1| inner membrane protein OxaA [Borrelia burgdorferi 29805] Length = 544 Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 109/325 (33%), Positives = 172/325 (52%), Gaps = 34/325 (10%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK-FSANEITILPGKSITTTNFLF 309 W+G S KY+ + SKE + +FK R K F N + K+I+ F++ Sbjct: 237 WIGSSTKYFGV--LVSKE-NMEVEFK-----KERGTLKSFIINNVR--NKKNISDEFFIY 286 Query: 310 AGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 AG K+ + ++K L F M ++ ++Y I PM M+M FY+++ N+G++ Sbjct: 287 AGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVFYDVIPNWGLS 346 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M +LYK Sbjct: 347 IIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDPKK-LNEEMGRLYKEEG 405 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPF 482 +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 406 VNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFG----YKL 461 Query: 483 YLPGFMHVGIWPIIMSLSMFIQM-------KMSPPPADKGQAMILNWMPVVFVFALSSFP 535 Y + + I P IM MF Q+ M Q + MP++F F L + P Sbjct: 462 YFVSWTDIRILPFIM---MFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMP 518 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 +GL+IYW +N+ +I+QQ +KMH Sbjct: 519 SGLLIYWITTNIFTILQQYY-LKMH 542 >gi|219685168|ref|ZP_03539988.1| inner membrane protein OxaA [Borrelia garinii Far04] gi|219673264|gb|EED30283.1| inner membrane protein OxaA [Borrelia garinii Far04] Length = 544 Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 94/272 (34%), Positives = 150/272 (55%), Gaps = 17/272 (6%) Query: 300 KSITTTNFLFAGAKEFPTIHHYEKD------LAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 K+I+ F++AG K+ + ++K L+ F M ++ +Y I PM M+M F Sbjct: 277 KNISDEFFIYAGPKDNRYLDIFDKSGDNTFGLSDIAFGMSVEKSLWYLIQVPMQMVMQVF 336 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y ++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + Sbjct: 337 YGVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKK-LNE 395 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472 M +LYK +NPL GC+P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 396 EMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVY 455 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSL----SMFIQMKMSPPPADKGQAMILNWMPVVFV 528 F Y + + I P IM S I + Q + MP++F Sbjct: 456 HFG----YKLYFVSWTDIRILPFIMMFTQLGSTIISSNLDLKNLGAQQKFLYFGMPIMFF 511 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 F L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 512 FILYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|216264429|ref|ZP_03436421.1| inner membrane protein OxaA [Borrelia burgdorferi 156a] gi|215980902|gb|EEC21709.1| inner membrane protein OxaA [Borrelia burgdorferi 156a] Length = 544 Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 107/324 (33%), Positives = 170/324 (52%), Gaps = 32/324 (9%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W+G S KY+ + SKE + +FK F N + K+I+ F++A Sbjct: 237 WIGSSTKYFGV--LVSKE-NMEVEFK----KERGILKSFIINNVR--NKKNISDEFFIYA 287 Query: 311 GAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 G K+ + ++K L F M ++ ++Y I PM M+M FY+++ N+G++I Sbjct: 288 GPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVFYDVIPNWGLSI 347 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 + T+ V++L FPL K + +TA + +QP++ EL+ KFK P + L + M +LYK + Sbjct: 348 IFLTIVVRILIFPLTFKGFRATAELSKLQPRMKELQVKFKHDPKK-LNEEMGRLYKEEGV 406 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFY 483 NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Y Sbjct: 407 NPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFG----YKLY 462 Query: 484 LPGFMHVGIWPIIMSLSMFIQM-------KMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 + + I P IM MF Q+ M Q + MP++F F L + P+ Sbjct: 463 FVSWTDIRILPFIM---MFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPS 519 Query: 537 GLIIYWSWSNVISIVQQAVIMKMH 560 GL+IYW +N+ +I+QQ I KMH Sbjct: 520 GLLIYWITTNIFTILQQYYI-KMH 542 >gi|224532140|ref|ZP_03672772.1| inner membrane protein OxaA [Borrelia valaisiana VS116] gi|224511605|gb|EEF82011.1| inner membrane protein OxaA [Borrelia valaisiana VS116] Length = 544 Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 101/321 (31%), Positives = 171/321 (53%), Gaps = 33/321 (10%) Query: 251 WLGISDKYWAS-VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 W+G S KY+ +F + E F + + L F N + K+I+ F++ Sbjct: 237 WIGSSTKYFEVLIFKENMEVEFRKEKEILK--------SFIVNNVG--NKKNISDEFFIY 286 Query: 310 AGAKEFPTIHHYEKD------LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 AG K+ + ++K+ L+ F M ++ ++ I PM M+M FY+++ N+G++ Sbjct: 287 AGPKDNRYLDIFDKNGDNTFGLSDIAFGMSVEKSLWHLIQVPMQMVMQVFYDVIPNWGLS 346 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M +LYK Sbjct: 347 IIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKK-LNEEMGRLYKEEG 405 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPF 482 +NPL GC+P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 406 VNPLGGCFPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFG----YKL 461 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-------KGQAMILNWMPVVFVFALSSFP 535 Y + + I P IM MF Q+ + ++ Q + MP++F F L + P Sbjct: 462 YFVSWTDIRILPFIM---MFTQLGSTIVSSNIDLKNLGAQQKFLYFGMPIMFFFILYNMP 518 Query: 536 AGLIIYWSWSNVISIVQQAVI 556 +GL++YW +N+ +I+QQ I Sbjct: 519 SGLLVYWITTNIFTILQQYYI 539 >gi|220919593|ref|YP_002494897.1| YidC translocase/secretase [Anaeromyxobacter dehalogenans 2CP-1] gi|254772745|sp|B8JDK5|OXAA_ANAD2 RecName: Full=Inner membrane protein oxaA gi|219957447|gb|ACL67831.1| YidC translocase/secretase [Anaeromyxobacter dehalogenans 2CP-1] Length = 546 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 121/422 (28%), Positives = 208/422 (49%), Gaps = 51/422 (12%) Query: 154 TPIKLVFKNANNILFE-RTISLDEHYLFKIVDTVTNNSIDQIRFSP---RGRIMRHKPQ- 208 P+++V +A+++ FE R +L F++ ++D + S G + P Sbjct: 147 APMRIVANDASSVTFEGRVGNLAARKTFRVTGKPYELALD-VELSGGAGSGTVGVLYPAF 205 Query: 209 --TATNTFGVQEG----FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASV 262 T + G+ G F+ + +++ ++ + SW G+ Y+ + Sbjct: 206 MPPDTKSGGIFSGPPLDFVRPVCRAGTTTERFDLAKEGAPEKLEGQVSWAGVDQHYFVAA 265 Query: 263 FIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG-KSITTTNFLFAGAKEFPTIHHY 321 +P++ + + G A +A + + G + ++ T ++AG K+ T+ Y Sbjct: 266 VLPAEPIGTCTFVRGPVKG-----AGLAAVAVPVEGGARKLSLT--VYAGPKDLDTLRGY 318 Query: 322 EKDLAIPRFEMLIDWG----WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + FE ID+G +F A+ + +M + +V N+G+AI+L TV V+L+ FP Sbjct: 319 GRG-----FESAIDYGAVAKFFALFARGLLYVMRWLEAIVRNWGVAIILLTVLVRLVLFP 373 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 L K S M+ +QP+I++L+ KF + + A++QLY+ H +NPL GC P+LLQ+ Sbjct: 374 LTYKSMQSMNEMRKLQPEIEKLKAKFGDDR-EKMNLAVMQLYQKHKVNPLGGCLPMLLQM 432 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 PV+FA+Y + S+E+ PF W+KDL A DP I PI M Sbjct: 433 PVWFALYAALQTSVELYREPFL-WMKDLTAHDPYFIL-------------------PIAM 472 Query: 498 SLSMFIQMKMSPPPADKGQA-MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +S F+ K+SP PAD QA M+L + P F + P GL +Y +N++SIVQQ ++ Sbjct: 473 GISSFVMQKLSPQPADNAQAKMMLYFFPGFFTVIMLFVPGGLTLYIFVNNLLSIVQQQLM 532 Query: 557 MK 558 MK Sbjct: 533 MK 534 >gi|149197354|ref|ZP_01874405.1| hypothetical protein LNTAR_00195 [Lentisphaera araneosa HTCC2155] gi|149139372|gb|EDM27774.1| hypothetical protein LNTAR_00195 [Lentisphaera araneosa HTCC2155] Length = 614 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/325 (29%), Positives = 171/325 (52%), Gaps = 35/325 (10%) Query: 246 HESNSWLGISDKYWASVFIPSKETSFH----------SQFKYLSDGHARYQAKFSANEIT 295 ++S W+ + ++Y+A FI SF S K +Y F+ +I+ Sbjct: 288 NDSYDWIAVKNQYFA--FIADTTDSFATVRTKTKEIISPTKNEDGSQDKYDLLFAEGQIS 345 Query: 296 ---ILPGKSITTTNFLFAGAKEFPTIHHYEKDL-AIPRFEMLIDW--GWFYFIAKPMFML 349 + PG S ++AG +E + + D I + M ++ W F+++ + Sbjct: 346 DFDLAPGASKEIVLDIYAGPQEIHVLENLGNDKKGIMQLNMFMNMKVSWLGFLSEMILKA 405 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + +F V +FG+AI+L T+ VKLLF+ L K S M + P+I E+RE+ K + PQ Sbjct: 406 LFFFNGFVNSFGLAIILLTISVKLLFWRLTNKSNKSMKKMAVLGPRIKEIREENKDN-PQ 464 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 V+ + ++ LY+ +NP GC P+LLQ+P+F A++ + ++E+RH F WI DL+ D Sbjct: 465 VMNQKVMALYREEGVNPAGGCLPMLLQMPIFIALFNALRSAIELRHVEFL-WITDLSQPD 523 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIM--SLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 ++PG V I P+++ +L M +Q KM+P AD+ Q ++ +MP++ Sbjct: 524 TLG----------FIPG---VPIRPLVIIWALLMLVQQKMTPSSADETQKKVMMFMPIMM 570 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQ 552 +F PAGL +YW + ++++++Q Sbjct: 571 LFFCYGMPAGLTLYWCFQSLMTLIQ 595 >gi|71275537|ref|ZP_00651823.1| 60 kDa inner membrane protein [Xylella fastidiosa Dixon] gi|71900184|ref|ZP_00682324.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1] gi|170731353|ref|YP_001776786.1| putative inner membrane protein translocase component YidC [Xylella fastidiosa M12] gi|254778175|sp|B0U6I1|OXAA_XYLFM RecName: Full=Inner membrane protein oxaA gi|71163837|gb|EAO13553.1| 60 kDa inner membrane protein [Xylella fastidiosa Dixon] gi|71730073|gb|EAO32164.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1] gi|167966146|gb|ACA13156.1| 60kDa inner-membrane protein [Xylella fastidiosa M12] Length = 565 Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 129/515 (25%), Positives = 237/515 (46%), Gaps = 63/515 (12%) Query: 54 AAVLIDDRAQALSMSPRVELKNPSL-IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 AV + +Q ++ +P+V + N + + + L G +L + + + LL+ Sbjct: 57 GAVPVQKDSQLIAAAPKVPVINVTTDVLQLKLDGFSILAADLLRFPQSKDRGAKPIKLLT 116 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG----------KILTPTTPIKLVFKN 162 + Y A +VS +N+ +PN +T SG +++ P V+ Sbjct: 117 -DDPNYPYSATTGWVSQSNS-PVPNLSTFLPEQSGVSYKLANDQDRLVVP-----FVWTA 169 Query: 163 ANNILFERTISLDE-HYLFKIVDTVTNNS---IDQIRFSPRGRI----MRHKPQTATNTF 214 AN + RT + + Y I D + N+ + F R+ + ++ T ++F Sbjct: 170 ANGVSIRRTFTFERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRAMTNPDSF 229 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 G + + + D N W+ + ++ + +IP K+ + Sbjct: 230 SF-NGAVWYSEKGGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKD---QAS 285 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK--EFPTIHH---YEKDLAIPR 329 L+ +R A+ T+ PG+S T L+ G K E T H ++ + R Sbjct: 286 LYLLAQNGSRDIAELRGPAFTVAPGQSTMTEARLWVGPKLVEQITKEHVKGLDRVVDYSR 345 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F+++ I + +F ++S+ +L+ N+G AI+ V +++ +PL+ QY S A M Sbjct: 346 FQLMA------LIGQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSAAQYKSAAKM 399 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + QP++ +L+E++ + Q Q+AM++LYK INP+ GC+PIL+Q+P+FFA+Y V+ Sbjct: 400 RKFQPRLQQLKERYGEDR-QKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVE 458 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+E+R AP+ GWI+DL DP I L I + M+ K++P Sbjct: 459 SVELRQAPWLGWIQDLTTRDPYFILPLLNI-------------------VIMWATQKLTP 499 Query: 510 PPA--DKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 PA D ++ MP++F ++ P+GL +YW Sbjct: 500 TPAGMDPIAGKMMQVMPLIFGVMMAFVPSGLALYW 534 >gi|296121961|ref|YP_003629739.1| 60 kDa inner membrane insertion protein [Planctomyces limnophilus DSM 3776] gi|296014301|gb|ADG67540.1| 60 kDa inner membrane insertion protein [Planctomyces limnophilus DSM 3776] Length = 699 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 133/423 (31%), Positives = 207/423 (48%), Gaps = 59/423 (13%) Query: 173 SLDEHYLFKIVDTVTN--NSIDQIRFSPRG--RIMRHKPQTATNTFGVQEGFIAVLGDKS 228 +L + YL TV N + ++R++ +G + P+ T V+ GF VL D Sbjct: 230 NLGQGYLLDYSLTVRNLTENPREVRYTMQGPVGVPLENPENVTKYRDVRVGF--VLPDGE 287 Query: 229 LVEQKYS------DIEKSSI-SNFHESNSWLGISDKYWASVFIP-------------SKE 268 VE + D E S S + ++G+ Y+AS+ P + Sbjct: 288 SVESSHQSATEVLDAESSGKPSVWTRPIEYVGVDATYFASLVHPVENQIKERTIESVQSQ 347 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILP---GKSITTTNF--LFAGAKEFPTIHHYEK 323 ++ +Q K+ SD + ++ I + P G + T+ L+AG K H Sbjct: 348 VTYPAQEKHFSD----VSIELTSVPIQLAPQGTGPNAEATHHFQLYAGPKR---AHLMAA 400 Query: 324 DLAIPRFEMLIDWGWFYFIAK-------PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 A E I W F+F+ PM L++ + L N+GIAI+L T+ V+ Sbjct: 401 VGAADVTEYHIGWNPFFFLEPLVRLLVIPMLALLNGLHALGINYGIAIILLTIIVRTCLM 460 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 PL +KQ S MK +QPK+ EL++KF L++A ++LY H NPLAGCWP+LLQ Sbjct: 461 PLTRKQAQSAQRMKEMQPKLKELQKKFAGDA-DGLRRAQLELYSKHGFNPLAGCWPVLLQ 519 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP--GFMHVGIWP 494 +P+FFA+Y+ +S+S+++R A F WI +LAA D LF LPF +P G+ + P Sbjct: 520 MPIFFALYRALSVSVDLRRASFL-WIDNLAAPD-----ALFE-LPFRVPFLGWTEFNLLP 572 Query: 495 IIMSLSMFIQMK-MSPPPADKGQAMILNWMPVVFVFALSSF---PAGLIIYWSWSNVISI 550 I+ + Q K + PPPAD+ QAM M ++ V F PAGL IY+ S++ + Sbjct: 573 ILTIILFVAQQKILMPPPADEEQAMQYRMMNIMMVMMGVMFYRVPAGLCIYFITSSLWGM 632 Query: 551 VQQ 553 ++ Sbjct: 633 AER 635 >gi|149193808|ref|ZP_01870906.1| putative inner membrane protein translocase component YidC [Caminibacter mediatlanticus TB-2] gi|149135761|gb|EDM24239.1| putative inner membrane protein translocase component YidC [Caminibacter mediatlanticus TB-2] Length = 511 Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 90/233 (38%), Positives = 145/233 (62%), Gaps = 22/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P ++ +G F A+ +F+L+ + Y + N+GIAI+L + V+++ FPL K VS Sbjct: 286 PELVDVVQYGVGTFFARNLFLLLDFLYKISHNWGIAIILLVILVRIVLFPLTFKGMVSMY 345 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ E++E++K+ P Q LQ M++LYK H NPL GC P+LLQIP+F+ IYK++ Sbjct: 346 KLKELAPKMKEIQERYKKDP-QKLQMHMMKLYKEHGANPLGGCLPLLLQIPIFYGIYKLL 404 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+E++ A F WIKDL+ DP Y I P++M ++M+I K+ Sbjct: 405 LYSIELKGAHFL-WIKDLSEMDP------------YF-------ILPVLMGITMYIHQKL 444 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P D Q I ++PVVF +++FPAGL++YW+ +N++SI+QQ +I K+ Sbjct: 445 TPTNFQDPMQEKIFKFLPVVFTIMMATFPAGLVLYWTVNNILSILQQVLINKI 497 >gi|195953256|ref|YP_002121546.1| 60 kDa inner membrane insertion protein [Hydrogenobaculum sp. Y04AAS1] gi|195932868|gb|ACG57568.1| 60 kDa inner membrane insertion protein [Hydrogenobaculum sp. Y04AAS1] Length = 514 Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 88/279 (31%), Positives = 158/279 (56%), Gaps = 38/279 (13%) Query: 285 YQAKFSANEITIL----PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y+ + ++ T + GK++ +F G KE+ + ++D+G F Sbjct: 254 YKERLGKDDFTFMLVSFDGKAL-----MFFGPKEYDLLKK-------ANLTDVLDFGDFR 301 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + +P+F + + Y GN+ I+I + T+ +++LFFPL K +S + + + PK+++++ Sbjct: 302 IVVEPLFKFLYFIYIKTGNWIISIFVLTLLIRILFFPLNYKSTLSMSKLSEVAPKMEKIK 361 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K P + +Q+ +++LYK NP +GC PIL+QIP+FF++YKVI I+ +++ A F Sbjct: 362 EKYKDDPVK-MQEEIMKLYKEVGFNPASGCLPILVQIPIFFSLYKVIVITADLKLAHFL- 419 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL D P+Y I PI+M ++M + ++++P P D Q I+ Sbjct: 420 WIHDLTQKD-----------PYY--------ILPILMGITMIMSLRLTPNP-DPRQNSIM 459 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + FVF +SFPA L+IYW+ +N++S +Q +I K+ Sbjct: 460 YISSLFFVFLFASFPAALVIYWTINNILSFLQTYLIRKV 498 >gi|225552387|ref|ZP_03773327.1| inner membrane protein OxaA [Borrelia sp. SV1] gi|225371385|gb|EEH00815.1| inner membrane protein OxaA [Borrelia sp. SV1] Length = 544 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 105/324 (32%), Positives = 169/324 (52%), Gaps = 32/324 (9%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W+G S KY+ + SKE + +FK F N + K+I+ F++A Sbjct: 237 WIGSSTKYFGV--LVSKE-NMEVEFK----KERGILKSFIVNNVR--NKKNISDEFFIYA 287 Query: 311 GAKE--FPTIHHYEKDLAIPRFE----MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 G K+ + + D F+ M ++ +++ I PM M+M FY+++ N+G++I Sbjct: 288 GPKDNRYLDVFDNRGDNTFGLFDIFFGMSVEKSFWHLIQVPMQMVMQVFYDVIPNWGLSI 347 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 + T+ V++L FPL K + +TA + +QP++ EL+ KFK P + L + M +LYK + Sbjct: 348 IFLTIVVRVLIFPLTFKGFRATAELSKLQPRMKELQVKFKHDPKK-LNEEMGRLYKEEGV 406 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFY 483 NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Y Sbjct: 407 NPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFG----YKLY 462 Query: 484 LPGFMHVGIWPIIMSLSMFIQM-------KMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 + + I P IM MF Q+ M Q + MP++F F L + P+ Sbjct: 463 FVSWTDIRILPFIM---MFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPS 519 Query: 537 GLIIYWSWSNVISIVQQAVIMKMH 560 GL+IYW +N+ +I+QQ I KMH Sbjct: 520 GLLIYWITTNIFTILQQYYI-KMH 542 >gi|281357428|ref|ZP_06243916.1| membrane protein insertase, YidC/Oxa1 family [Victivallis vadensis ATCC BAA-548] gi|281316031|gb|EFB00057.1| membrane protein insertase, YidC/Oxa1 family [Victivallis vadensis ATCC BAA-548] Length = 590 Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 103/317 (32%), Positives = 167/317 (52%), Gaps = 21/317 (6%) Query: 250 SWLGISDKYWASVFIPSKE--TSFHSQFKYLSDGHARYQAKFSANEITIL--PGKSITTT 305 W GIS+KY+ V + +KE F + + Y A ++ G+S + Sbjct: 278 DWAGISNKYFG-VILTAKEPFQLFQGRTMQMRGKDKVYIPTVGARLPAMMLNAGESKSVA 336 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 ++G K + +E M + WG ++A+ + ++ + G++G++I+ Sbjct: 337 FRYYSGPKMTQLLEAFEPST---NRMMHLAWGPLDYLARLLLWVLVQLHGFCGSYGVSII 393 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T+ V+LLF+P+ K S M+ +QPKI LREK+K + PQ+L M++LY+ +N Sbjct: 394 ILTLMVRLLFYPVTAKANASMRKMQAVQPKIAALREKYKDN-PQLLNSKMMELYREEKVN 452 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P GC PILLQIPVFFA+Y + ++++R F W KDLAAAD +P Y Sbjct: 453 PFGGCLPILLQIPVFFALYATLDGAVQLRQVSFL-WAKDLAAAD------TVAKIPLY-- 503 Query: 486 GFMHVGIWPIIMSLS--MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 F + I P+++ ++ M IQ +M+P D Q ++ MPVV + L P+GL +YW+ Sbjct: 504 -FYDLPINPLVLMMTALMMIQQRMTPMAMDPMQKKMMLMMPVVMLIFLYDLPSGLTLYWT 562 Query: 544 WSNVISIVQQAVIMKMH 560 SN SI+Q + K H Sbjct: 563 VSNFFSIIQLKLQQKAH 579 >gi|302336556|ref|YP_003801762.1| membrane protein insertase, YidC/Oxa1 family [Spirochaeta smaragdinae DSM 11293] gi|301633741|gb|ADK79168.1| membrane protein insertase, YidC/Oxa1 family [Spirochaeta smaragdinae DSM 11293] Length = 585 Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 80/232 (34%), Positives = 142/232 (61%), Gaps = 17/232 (7%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW I K L+ +FY+++ N+G+AI+L T+ VK++ FP+ K Y ST+ M+ +QPK+ Sbjct: 357 GWLEVIMK---KLLVFFYSIIPNWGVAIILLTILVKVVLFPITHKSYESTSKMQMLQPKM 413 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E+++K++ +P ++ Q+ M +LYK +NP+ GC P+LLQ+P+F A+Y + + ++R + Sbjct: 414 KEIQDKYRDNPNKMNQE-MAELYKREKVNPMGGCLPMLLQMPMFIAMYGLFNKYFDLRGS 472 Query: 457 PFW-GWIKDLAAADPTNIFTLFGILPFYLP--GFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 F GWI DL++ + +++ PF +P G+ + + P+ +M + KM+ P+ Sbjct: 473 SFIPGWITDLSSPE-----SVYSFAPFKIPILGWSDIRLLPMFFVATMILSSKMTQSPSS 527 Query: 514 KGQ-----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 G M+ MP+ F F L + P+GL++YW +NV++I QQ I K+ Sbjct: 528 AGSQNSSMKMMTYMMPIFFFFFLYNAPSGLLVYWIVTNVLTIGQQKAISKIQ 579 >gi|285019933|ref|YP_003377644.1| inner-membrane protein oxaa [Xanthomonas albilineans GPE PC73] gi|283475151|emb|CBA17650.1| probable inner-membrane protein oxaa [Xanthomonas albilineans] Length = 575 Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 129/506 (25%), Positives = 235/506 (46%), Gaps = 67/506 (13%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLS-----PSNTKNAYFAELDYVSTANN---I 133 + + G+ D +L Y +SP V LL+ P N + + E + S + Sbjct: 95 LTMDGSSVLDADLLMYPQTQQPSSPPVQLLTEDALHPYNAISGWIGERNSPSPSLGGFRP 154 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSID 192 E P V L G+ + + V+ + I R +L HY ++ D + N+ Sbjct: 155 EQPGKEYV--LAKGQ---DSLEVPFVWNGPSGISIRRVYTLQPGHYAVQVRDEIVNHGSK 209 Query: 193 QIR---FSPRGRIMRHKPQTATNT----------FGVQEGFIAVLGDKSLVEQKYSDIEK 239 + F R+ + TN F Q+G+ + + D Sbjct: 210 PWQGYVFRKLSRVPTIVSRGMTNPDSFSFNGATWFSPQDGY---------QRRAFKDYLA 260 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 N S W+ + ++ + +IP + LS+ + + ++PG Sbjct: 261 DGPLNQTISGGWIAVLQHHFFTSWIPQAD---QQSVYLLSNEGPLHVIEARGPAFVVVPG 317 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNL 356 +T L+ G K ++ K+ + + ++D+ F +A + +F ++S+ + L Sbjct: 318 GHASTEARLWVGPK---LVNQIAKE-QVKGLDRVVDYSRFSLMALLGQGLFWILSHLHAL 373 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GN+G +I+ + +KLL +PL+ QY S+A ++ QP++ +L+E++ Q LQ AM+ Sbjct: 374 LGNWGWSIVGLVLLLKLLLYPLSSAQYKSSAKLRKFQPRMQQLKERYGDDK-QKLQTAMM 432 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK INP+ GC P+L+Q+P+FFA+Y V+ S+E+R AP++ WI+DL A DP I Sbjct: 433 ELYKKEKINPMGGCLPVLIQMPIFFALYWVLVESVELRQAPWFAWIQDLTARDPYFIL-- 490 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFP 535 P+I + M + K++P P D QA ++ +MP+VF ++ P Sbjct: 491 -----------------PVINAAVMLLTQKLTPTPGMDPAQAKMMQFMPLVFGVMMAFVP 533 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHG 561 +GL++YW + + ++QQ + K HG Sbjct: 534 SGLVLYWVTNGSLGLLQQWWMNKRHG 559 >gi|163782852|ref|ZP_02177848.1| hypothetical protein HG1285_15991 [Hydrogenivirga sp. 128-5-R1-1] gi|159881973|gb|EDP75481.1| hypothetical protein HG1285_15991 [Hydrogenivirga sp. 128-5-R1-1] Length = 514 Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 85/249 (34%), Positives = 148/249 (59%), Gaps = 29/249 (11%) Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 L+ GAK + + ++L + E L+DWG KP+F+ M + Y G++ ++I++ Sbjct: 287 LYMGAKYYSRL----RELGL---EDLLDWGMLKVAVKPLFIFMYWVYEHTGSWVLSIVIL 339 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 T ++++FFPL K S ++ P+++++++K+K P + +Q+ M++LY NP+ Sbjct: 340 TFLLRVVFFPLNYKSTTSMMKLQQAAPQLEKIKKKYKDDPAK-MQQEMMKLYSEIGFNPM 398 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 +GC PIL+QIPVFFA+YKV+ I+++++ + WI LA D PFY Sbjct: 399 SGCLPILVQIPVFFALYKVLIITVDLKLSGML-WIPSLADKD-----------PFY---- 442 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 I P+IM L+M +Q K++P P D Q +I+ V F F +SFP+GL++YW+ +N+ Sbjct: 443 ----ILPVIMGLTMILQQKVTPNP-DPKQNLIMYISAVAFTFLFASFPSGLVLYWTVNNI 497 Query: 548 ISIVQQAVI 556 ++I Q +I Sbjct: 498 LNIGQNYLI 506 >gi|288818681|ref|YP_003433029.1| inner membrane protein [Hydrogenobacter thermophilus TK-6] gi|288788081|dbj|BAI69828.1| inner membrane protein [Hydrogenobacter thermophilus TK-6] gi|308752269|gb|ADO45752.1| membrane protein insertase, YidC/Oxa1 family [Hydrogenobacter thermophilus TK-6] Length = 501 Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 86/248 (34%), Positives = 144/248 (58%), Gaps = 29/248 (11%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 +AGAKE+ + K + + +ID+G + KP+F+ M + Y + ++ +I+ T Sbjct: 263 YAGAKEYSRL----KKIGLSD---VIDYGTLKILVKPLFIFMYWIYEHLRSWVFSILALT 315 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + V++ FPL K +S + + PK+ E+REK+K+ P + +Q+ M++LY NP++ Sbjct: 316 LLVRVFMFPLTYKSTISMMKLSELAPKVQEIREKYKEDPTK-MQEEMMKLYSQVGFNPMS 374 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P++LQIPVFFA+YKV++I+ +++ A WI L+ D P+Y Sbjct: 375 GCLPMILQIPVFFALYKVLTITADLQLASML-WIPSLSHKD-----------PYY----- 417 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I PIIM L+M Q +SP P DK Q ++ V F F +SFPAGL++YW+++N+ Sbjct: 418 ---ILPIIMGLTMIAQQFISPNP-DKTQNFMMYVSSVAFTFLFASFPAGLVLYWTFNNIF 473 Query: 549 SIVQQAVI 556 ++ Q +I Sbjct: 474 NMGQSYLI 481 >gi|224534702|ref|ZP_03675274.1| inner membrane protein OxaA [Borrelia spielmanii A14S] gi|224513950|gb|EEF84272.1| inner membrane protein OxaA [Borrelia spielmanii A14S] Length = 544 Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 91/268 (33%), Positives = 151/268 (56%), Gaps = 23/268 (8%) Query: 307 FLFAGAKEFPTIHHYEKD------LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 F++AG K+ + ++K+ L+ F M ++ ++ I PM ++M FY+++ N+ Sbjct: 284 FIYAGPKDNRYLDIFDKNDANTFGLSDSAFGMSVEKSLWHLIQVPMQIVMQVFYDVIPNW 343 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M +LYK Sbjct: 344 GLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKK-LNEEMGRLYK 402 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGI 479 +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 403 EEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGANFIPGWIDDLSIGDSVYHFG---- 458 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-------KGQAMILNWMPVVFVFALS 532 Y + + I P IM MF Q+ + ++ Q + MP++F F L Sbjct: 459 YKLYFVSWTDIRILPFIM---MFTQLGSTIVSSNIDLKNLGAQQKFLYFGMPIMFFFILY 515 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 516 NMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|188993861|ref|YP_001905871.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. campestris str. B100] gi|254778172|sp|B0RMM6|OXAA_XANCB RecName: Full=Inner membrane protein oxaA gi|167735621|emb|CAP53839.1| inner membrane insertion protein [Xanthomonas campestris pv. campestris] Length = 575 Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 125/504 (24%), Positives = 225/504 (44%), Gaps = 61/504 (12%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLS----PSNTKNAYFAELDYVSTANNIELPN 137 + L G D L + P+ L P N + + +E V Sbjct: 101 LKLDGRSVLDAELLQFPQTKDGTEPVKLLTEDAAHPYNATSGWASERSPVPGVGGFRAEQ 160 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNS---IDQ 193 T + L G+ T + V+ N + R +L Y I D V N S + Sbjct: 161 PGTTFELAKGQ---NTLVVPFVWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNG 217 Query: 194 IRFSPRGRIMRHKPQTATNT----------FGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 F R+ + TN + QEG+ + + D Sbjct: 218 YVFRKLSRVPTILSRGMTNPDSFSFNGATWYSPQEGY---------ERRAFKDYMDDGGL 268 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N + W+ + ++ + +IP K+ + S + DG R A+ T+ PG+S + Sbjct: 269 NRQITGGWVALLQHHFFTAWIPQKDQA--SLYVLAQDG-PRDVAELRGPAFTVAPGQSAS 325 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNF 360 T L+ G K + + + + ++D+ F +A + +F ++S+ ++ + N+ Sbjct: 326 TEARLWVGPKLVSLLAKED----VKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNW 381 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+ + ++L +PL+ QY S A M+ QP++ +L+E++ Q Q+A ++L+K Sbjct: 382 GWAIIGLVLLLRLALYPLSAAQYKSGAKMRRFQPRLAQLKERYGDDR-QKYQQATMELFK 440 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 INP+ GC P+L+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL A DP I Sbjct: 441 KEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGWIQDLTARDPYFIL------ 494 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLI 539 P++ M+ K++P P D QA ++ +MP+VF ++ PAGL+ Sbjct: 495 -------------PVLNIAIMWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLV 541 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW + + ++ Q +++ HG + Sbjct: 542 LYWVVNGGLGLLIQWWMIRQHGEK 565 >gi|188579256|ref|YP_001916185.1| putative inner membrane protein translocase component YidC [Xanthomonas oryzae pv. oryzae PXO99A] gi|254778173|sp|B2SUW0|OXAA_XANOP RecName: Full=Inner membrane protein oxaA gi|188523708|gb|ACD61653.1| 60 kDa inner-membrane protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 574 Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 126/502 (25%), Positives = 230/502 (45%), Gaps = 45/502 (8%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLS----PSNTKNAYFAELDYVSTANNIELPN 137 + L G D L + +P+ L P N + + +E V Sbjct: 100 LKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDAAHPYNATSGWASEHSPVPGVGGFRAEQ 159 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQ--- 193 T + L G+ T + V+ N + RT +L+ Y I D V N S Sbjct: 160 PGTTFELAKGQ---NTLVVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNG 216 Query: 194 --IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251 R R + + T ++F G + + D N + W Sbjct: 217 YVFRKLSRVPTILSRGMTNPDSFSF-NGATWYSPQAGYERRAFKDYMDDGGLNRQITGGW 275 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 + + ++ + +IP + + L+ R A+ T+ PG++ TT L+ G Sbjct: 276 IALLQHHFFTAWIPQND---QASLYVLNKDGPRDVAELRGPAFTVAPGQTATTEARLWVG 332 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNFGIAIMLTT 368 K I + + + +ID+ F +A + +F ++S+ ++ + N+G AI+ Sbjct: 333 PKLVSLIAKED----VKGLDRVIDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLV 388 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 V ++L+ +PL+ QY S+A M+ QP++ +L+E++ + Q+A ++L+K INP+ Sbjct: 389 VLLRLVLYPLSSAQYKSSAKMRKFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMG 447 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+L+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL A DP F LP + Sbjct: 448 GCLPLLIQMPIFFALYWVLVESVELRQAPWLGWIQDLTARDPH----------FILPA-L 496 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 ++ I M+ K++P P D QA ++ +MP+VF ++ P+GL++YW + Sbjct: 497 NIAI--------MWATQKLTPTPGIDPMQAKMMQFMPLVFGAMMAFVPSGLVLYWVVNGG 548 Query: 548 ISIVQQAVIMKMHGAEIGLIDR 569 ++++ Q +++ HG + I R Sbjct: 549 LNLLIQWWMIRQHGEKPSKIIR 570 >gi|58584259|ref|YP_203275.1| putative inner membrane protein translocase component YidC [Xanthomonas oryzae pv. oryzae KACC10331] gi|166714253|ref|ZP_02245460.1| putative inner membrane protein translocase component YidC [Xanthomonas oryzae pv. oryzicola BLS256] gi|75508023|sp|Q5GTT3|OXAA_XANOR RecName: Full=Inner membrane protein oxaA gi|58428853|gb|AAW77890.1| 60 kDa inner-membrane protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 574 Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 126/502 (25%), Positives = 230/502 (45%), Gaps = 45/502 (8%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLS----PSNTKNAYFAELDYVSTANNIELPN 137 + L G D L + +P+ L P N + + +E V Sbjct: 100 LKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDAAHPYNATSGWASEHSPVPGVGGFRAEQ 159 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQ--- 193 T + L G+ T + V+ N + RT +L+ Y I D V N S Sbjct: 160 PGTTFELAKGQ---NTLVVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNG 216 Query: 194 --IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251 R R + + T ++F G + + D N + W Sbjct: 217 YVFRKLSRVPTILSRGMTNPDSFSF-NGATWYSPQAGYERRAFKDYMDDGGLNRQITGGW 275 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 + + ++ + +IP + + L+ R A+ T+ PG++ TT L+ G Sbjct: 276 IALLQHHFFTAWIPQND---QASLYVLNKDGPRDVAELRGPAFTVAPGQTATTEARLWVG 332 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNFGIAIMLTT 368 K I + + + +ID+ F +A + +F ++S+ ++ + N+G AI+ Sbjct: 333 PKLVSLIAKED----VKGLDRVIDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLV 388 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 V ++L+ +PL+ QY S+A M+ QP++ +L+E++ + Q+A ++L+K INP+ Sbjct: 389 VLLRLVLYPLSSAQYKSSAKMRKFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMG 447 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+L+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL A DP F LP + Sbjct: 448 GCLPLLIQMPIFFALYWVLVESVELRQAPWLGWIQDLTARDPH----------FILPA-L 496 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 ++ I M+ K++P P D QA ++ +MP+VF ++ P+GL++YW + Sbjct: 497 NIAI--------MWATQKLTPTPGIDPMQAKMMQFMPLVFGAMMAFVPSGLVLYWVVNGG 548 Query: 548 ISIVQQAVIMKMHGAEIGLIDR 569 ++++ Q +++ HG + I R Sbjct: 549 LNLLIQWWMIRQHGEKPSKIIR 570 >gi|84626027|ref|YP_453399.1| putative inner membrane protein translocase component YidC [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|123520412|sp|Q2NX52|OXAA_XANOM RecName: Full=Inner membrane protein oxaA gi|84369967|dbj|BAE71125.1| 60 kDa inner-membrane protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 578 Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 126/502 (25%), Positives = 230/502 (45%), Gaps = 45/502 (8%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLS----PSNTKNAYFAELDYVSTANNIELPN 137 + L G D L + +P+ L P N + + +E V Sbjct: 104 LKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDAAHPYNATSGWASEHSPVPGVGGFRAEQ 163 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQ--- 193 T + L G+ T + V+ N + RT +L+ Y I D V N S Sbjct: 164 PGTTFELAKGQ---NTLVVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNG 220 Query: 194 --IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251 R R + + T ++F G + + D N + W Sbjct: 221 YVFRKLSRVPTILSRGMTNPDSFSF-NGATWYSPQAGYERRAFKDYMDDGGLNRQITGGW 279 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 + + ++ + +IP + + L+ R A+ T+ PG++ TT L+ G Sbjct: 280 IALLQHHFFTAWIPQND---QASLYVLNKDGPRDVAELRGPAFTVAPGQTATTEARLWVG 336 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYFYNLVGNFGIAIMLTT 368 K I + + + +ID+ F +A + +F ++S+ ++ + N+G AI+ Sbjct: 337 PKLVSLIAKED----VKGLDRVIDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLV 392 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 V ++L+ +PL+ QY S+A M+ QP++ +L+E++ + Q+A ++L+K INP+ Sbjct: 393 VLLRLVLYPLSSAQYKSSAKMRKFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMG 451 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+L+Q+P+FFA+Y V+ S+E+R AP+ GWI+DL A DP F LP + Sbjct: 452 GCLPLLIQMPIFFALYWVLVESVELRQAPWLGWIQDLTARDPH----------FILPA-L 500 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 ++ I M+ K++P P D QA ++ +MP+VF ++ P+GL++YW + Sbjct: 501 NIAI--------MWATQKLTPTPGIDPMQAKMMQFMPLVFGAMMAFVPSGLVLYWVVNGG 552 Query: 548 ISIVQQAVIMKMHGAEIGLIDR 569 ++++ Q +++ HG + I R Sbjct: 553 LNLLIQWWMIRQHGEKPSKIIR 574 >gi|330835990|ref|YP_004410631.1| Membrane protein oxaA [Spirochaeta coccoides DSM 17374] gi|329747893|gb|AEC01249.1| Membrane protein oxaA [Spirochaeta coccoides DSM 17374] Length = 604 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 89/224 (39%), Positives = 131/224 (58%), Gaps = 16/224 (7%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW I K + L FY ++ N+G+AI+L T+ ++L PL KK STA M + P++ Sbjct: 357 GWLETILKGVLQL---FYKVIPNYGVAIILLTLLTRVLMHPLNKKSMASTARMSALSPQM 413 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 DELR+K+ + PQ L +A LY+ INPL GC P+LLQ P+ A+Y +++ E+R A Sbjct: 414 DELRKKYADN-PQKLNEATAALYRKEKINPLGGCLPMLLQFPIMIALYGLLNKHFELRGA 472 Query: 457 PFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--AD 513 F GWI DL+ P + T LPF L +H I PI+ + SM MK++P A Sbjct: 473 MFIPGWIPDLSV--PDTVLTFSFNLPF-LGNQLH--ILPILYATSMIFSMKLNPSSSGAA 527 Query: 514 KGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 QA + + MP++ F L + P+GL++YWS N+IS++QQ Sbjct: 528 GSQASTMKFMMYGMPLILFFTLYNAPSGLLLYWSSVNLISMLQQ 571 >gi|153827655|ref|ZP_01980322.1| inner membrane protein OxaA [Vibrio cholerae MZO-2] gi|149737868|gb|EDM52773.1| inner membrane protein OxaA [Vibrio cholerae MZO-2] Length = 175 Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 76/184 (41%), Positives = 111/184 (60%), Gaps = 21/184 (11%) Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 +PL K QY S A M+ +QPK+ +RE+ Q + + M++LYK +NPL GC PILL Sbjct: 2 YPLTKAQYTSMAKMRMLQPKLQAMRERIGDDR-QRMSQEMMELYKKEKVNPLGGCLPILL 60 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+P+F A+Y + S+E+RH+PF+GWI DL+A DP I P+ Sbjct: 61 QMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYIL-------------------PL 101 Query: 496 IMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 +M SMF+ KMSP D Q I+ +MPV+F F FP+GL++YW SN+++++QQ Sbjct: 102 LMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQT 161 Query: 555 VIMK 558 +I K Sbjct: 162 LIYK 165 >gi|307721586|ref|YP_003892726.1| membrane protein insertase, YidC/Oxa1 family [Sulfurimonas autotrophica DSM 16294] gi|306979679|gb|ADN09714.1| membrane protein insertase, YidC/Oxa1 family [Sulfurimonas autotrophica DSM 16294] Length = 534 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 89/230 (38%), Positives = 139/230 (60%), Gaps = 21/230 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P I++GWF F AKP+F ++S+ + + GN+G AI+ T ++ + +PL K VS Sbjct: 305 PVLTNAIEYGWFTFAAKPLFAVLSWLHGIFGNWGWAIIALTALIRAVLYPLTYKGMVSMQ 364 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 MK + PK+ EL+EK+K+ PQ L A +++YK H NPL GC P++LQIPVFFA+Y+ + Sbjct: 365 KMKELAPKLKELKEKYKKD-PQRLNAATMEMYKKHGANPLGGCLPMILQIPVFFALYRTL 423 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ A + WI DL+ D P+Y + PI+M SMFIQ +M Sbjct: 424 LNAVELQGADWILWINDLSRMD-----------PYY--------VLPILMGASMFIQQRM 464 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +P D Q + ++PV+F F +FP+GL++YW +N+ SI QQ ++ Sbjct: 465 TPNNFTDPMQEKVFKYLPVIFTFFFVTFPSGLVLYWFTNNLFSIAQQFMV 514 >gi|153007343|ref|YP_001381668.1| 60 kDa inner membrane insertion protein [Anaeromyxobacter sp. Fw109-5] gi|166975849|sp|A7HIY8|OXAA_ANADF RecName: Full=Inner membrane protein oxaA gi|152030916|gb|ABS28684.1| 60 kDa inner membrane insertion protein [Anaeromyxobacter sp. Fw109-5] Length = 549 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 117/429 (27%), Positives = 196/429 (45%), Gaps = 48/429 (11%) Query: 146 SGKILTPTTPIKLVFKNANNILFE-RTISLDEHYLFKIVDTVTNNSID---QIRFSPRGR 201 +G + P+++V ++A + FE R +++ + ++D Q + G Sbjct: 140 AGNDVAARAPMRVVAQDARSATFEGRAGKATVRKTYRLTEKAYELALDLEVQAPATQGGG 199 Query: 202 IM-----RHKPQTATNTF--GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGI 254 I+ P T F G F+ + +++ K + + +W G+ Sbjct: 200 IVVLYPGYMPPDTKKGGFFSGPPVEFVRPVCRAGEETERFDVDGKEAQEKLQGTVAWAGM 259 Query: 255 SDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE 314 Y+ S P++ K G + L G S +++G K+ Sbjct: 260 DQGYFVSAVFPAQPAGTCLFAKGPVQGSGLTALRLP------LDGGSAKFGFTVYSGPKD 313 Query: 315 FPTIHHYEKDLAIPRFEMLIDWGW----FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 + Y ++ FE ID+G F F A+ + +M + LV N+G+AI+L TV Sbjct: 314 LDHLRTYGRE-----FESAIDYGAMARPFAFFARLLLFVMRWLERLVANWGLAIILLTVL 368 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 VK+L +PL K S M+ +QP+I++L+ K + L A +QLY+ H +NPL GC Sbjct: 369 VKVLLYPLTAKSMQSMNEMRKLQPEIEKLKAKHGNDR-EKLNLATMQLYQQHKVNPLGGC 427 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 P+L+Q+P++FA+Y + S+E+ PF WI DL DP + Sbjct: 428 LPMLIQLPIWFALYATLQTSVELYREPFL-WIHDLTVKDPLYVL---------------- 470 Query: 491 GIWPIIMSLSMFIQMKMSPPPADKGQA-MILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 PI M +S ++ + SP PAD QA M+L +MP F + S PAGL +Y +N++S Sbjct: 471 ---PIAMGVSQYVMQRFSPQPADNAQAKMMLYFMPGFFTLLMLSVPAGLTLYIFVNNLLS 527 Query: 550 IVQQAVIMK 558 I QQ +M+ Sbjct: 528 IAQQQFMMR 536 >gi|257457349|ref|ZP_05622520.1| inner membrane protein OxaA [Treponema vincentii ATCC 35580] gi|257445271|gb|EEV20343.1| inner membrane protein OxaA [Treponema vincentii ATCC 35580] Length = 521 Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 124/427 (29%), Positives = 210/427 (49%), Gaps = 59/427 (13%) Query: 167 LFERTISLDEHYLFKIVDTVTNNS-IDQIRFSPRGRIMRHKPQTA------TNTFGVQEG 219 L +R L + Y+F++ T++ ++ + + F G +R PQ + + + Sbjct: 112 LAKRYTFLPDDYMFELAVTISGDADMQGLNFDNAGYTLRTMPQIGPDWNAKADRYEYRNF 171 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS--KETSFHSQFKY 277 F + G K K S ++ + +S W GIS KY++ + IPS + +S + Sbjct: 172 FAYINGKK-----KDSALKANQTKVITDSVPWAGISGKYFSLIVIPSVPAQQILYSAAQP 226 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAG--------AKEFPTIHHYEKD----- 324 +D Q FS IT G +T ++ G P+ ++Y D Sbjct: 227 NADTVQDSQLFFSRPVIT---GNRVTDVYRIYLGPCSENILSTYNIPSKNNYNYDNLRID 283 Query: 325 -LAIPR-----FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 +A+ E+L+ W L+ +FY L+ N+G++I+L T+ +K++FFPL Sbjct: 284 TVAVSSGIWRPLEVLLKW------------LLQFFYKLIPNWGVSIILVTILIKVIFFPL 331 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 KK ST M+ +QPKI EL+ K+K PQ L + M +LYK NPL+GC P+L+Q+P Sbjct: 332 TKKSSESTQQMQKMQPKIQELQAKYK-GKPQKLNEEMAKLYKEAGYNPLSGCLPLLIQLP 390 Query: 439 VFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 + FA+Y++ + E R A F WI DL+ D +I +PF G+ + I PI+ Sbjct: 391 ILFAMYRLFNNYFEFRGAMFIPHWIPDLSVGD--SILQFPSPIPFL--GWTDLRILPIVY 446 Query: 498 SLSMFIQMKMSPPPADKGQ-----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +S + K++ P Q +++ MP+ F F + P+GL++YW+ +N + +VQ Sbjct: 447 VISQMVFGKITQTPTSDQQQNNTMKIMMYGMPLFFFFMFYNAPSGLLLYWTCTNFLMLVQ 506 Query: 553 QAVIMKM 559 Q +I M Sbjct: 507 QMIIKAM 513 >gi|301168599|emb|CBW28189.1| membrane protein OxaA [Bacteriovorax marinus SJ] Length = 488 Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 80/232 (34%), Positives = 138/232 (59%), Gaps = 21/232 (9%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + ++ ID+G+F I+ P+ + + ++ V N+GIAI++ T+ ++ + FPL K + S Sbjct: 275 KLDLSIDFGFFGIISVPILRGLQFVHDYVPNYGIAIIILTILIRTIMFPLQYKSFKSMKK 334 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ IQP++ +++EKFK PQ +QK ++ +K NPL GC P++ Q+P+FFA Y+V+ Sbjct: 335 MQKIQPQLTKIKEKFKDD-PQRMQKETMEAFKKAGANPLGGCLPLIAQMPIFFAFYQVLY 393 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + E +PF+GWI DL+ D P+Y + P++M+L+M +Q +++ Sbjct: 394 NAEEFVGSPFFGWIADLSIKD-----------PYY--------VLPVLMALAMALQTRLN 434 Query: 509 P-PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 P P AD Q I+ MP+VF F + PAGL +Y S + + QQ ++ K+ Sbjct: 435 PSPSADPTQKKIMMLMPIVFGFFMKDLPAGLNLYIFTSTIYGVGQQLLVYKL 486 >gi|162450792|ref|YP_001613158.1| inner-membrane protein [Sorangium cellulosum 'So ce 56'] gi|161161374|emb|CAN92679.1| probable inner-membrane protein [Sorangium cellulosum 'So ce 56'] Length = 594 Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 95/294 (32%), Positives = 157/294 (53%), Gaps = 28/294 (9%) Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + F + K + GH Y+A+ + E + PG ++T F G KE + + ++ Sbjct: 278 ESSKFQDKSKDPNFGHV-YRARLAYPEHELAPGGAVTYKLLSFTGPKERDLLAAVDHGVS 336 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 +I+ GWF IAK + + Y VG++G AI+L T+ V+LL FPL+ +Q S Sbjct: 337 -----EVINLGWFSPIAKLLVSYLYVLYGAVGSWGWAIVLLTITVRLLLFPLSIQQIKSA 391 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI-NPLAGCWPILLQIPVFFAIYK 445 A M+ ++P++DE+ ++K Q AM +L++ + + NP+ GC+P+LLQ+PV+FA+Y Sbjct: 392 AAMRKLKPEMDEINARYKDDAAQ-RGLAMQELWRKNKVANPVVGCFPMLLQMPVWFALYT 450 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + ++E+ H PF I DL+A PG + I PI++ S FIQ Sbjct: 451 ALQTAVELYHTPFGPVIPDLSA-----------------PGRYY--IIPIVLGGSSFIQQ 491 Query: 506 KMSPPPADKG-QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K+ PP D Q M+L MP +F + PAGL +Y + + I QQ ++ + Sbjct: 492 KLMPPQGDPAQQKMMLYLMPGIFTAMMLFLPAGLGVYMLTNTWLGIGQQVLVER 545 >gi|315453617|ref|YP_004073887.1| inner-membrane protein, OxaA [Helicobacter felis ATCC 49179] gi|315132669|emb|CBY83297.1| inner-membrane protein, OxaA [Helicobacter felis ATCC 49179] Length = 552 Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 124/374 (33%), Positives = 190/374 (50%), Gaps = 66/374 (17%) Query: 207 PQTATNT-FGVQEGFIAVLGDKS------LVEQKYSDIEKSSISNFHESNSWLGIS---- 255 P+T+ NT + + G V D L+ + +EK + E+ S+ I+ Sbjct: 198 PKTSVNTAYILSNGSRPVADDDGYAFHGVLLGTQEKKLEKIEDGDIKEAKSFKDIAFIAS 257 Query: 256 -DKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI-TILPGKSITTTNFLFAGAK 313 D+Y+ S+F FS + TI+ ++ T F K Sbjct: 258 VDRYYTSLF-------------------------FSTTPLATIIDSQTGTKNPLPFVSLK 292 Query: 314 EFPTIHHY--EKDLAI-----PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 +H Y KD + P +I++G F AKP+F+L+ Y Y N+G AI+L Sbjct: 293 GNADLHGYIGPKDHRLLEQISPMLTDVIEYGMITFFAKPVFLLLDYLYRYTHNWGWAIIL 352 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 T+ ++++ +PL+ K VS +K++ PK+ EL+EK+K S PQ LQ M+QLYK H NP Sbjct: 353 LTLIIRIILYPLSYKGMVSMQKIKDLTPKMKELQEKYK-SDPQKLQMHMMQLYKKHGANP 411 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 L GC P+LLQIPVFFAIY+V+ ++E++ A + WI DL+ DP I Sbjct: 412 LGGCLPLLLQIPVFFAIYRVLYNAVELKSAEWIFWIHDLSLMDPYFIL------------ 459 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 PI+M +SM+ Q ++P D QA I +P+ F L +FPAGL++YW+ + Sbjct: 460 -------PILMGISMYAQQVLTPSTITDPTQAKIFKMLPLFFTLFLITFPAGLVLYWTIN 512 Query: 546 NVISIVQQAVIMKM 559 N+ SI+QQ I +M Sbjct: 513 NLFSILQQWGINQM 526 >gi|189218938|ref|YP_001939579.1| preprotein translocase subunit YidC [Methylacidiphilum infernorum V4] gi|189185796|gb|ACD82981.1| Preprotein translocase subunit YidC [Methylacidiphilum infernorum V4] Length = 592 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 165/328 (50%), Gaps = 31/328 (9%) Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETS---------FHSQFKYLSDGHARYQAKF 289 ++ IS+ +E W+ + ++Y+A V P SQF A+ Sbjct: 253 RTVISSPNEPLRWVAVKNQYFAIVVSPPSTLPPIQIEAVPVELSQFPLEQSSQAQVPVGI 312 Query: 290 SA----NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 A E+++ P ++ + G KE+ + I R WGW + KP Sbjct: 313 KAWAYFPELSLQPNSILSVQFKTYGGPKEYARLKKLGDH--IDRVMEYGMWGW---VVKP 367 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + M +F++ + N+G+ I+L T+ +K +F+PL K + M+ + PK+ EL+ ++K Sbjct: 368 LVWCMVHFHSFIPNYGLDIILFTLLLKGIFWPLQSKANRNMKAMQALSPKLKELQARYKD 427 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 P + +Q M++LY+ + +NPL GC P+L+QIP+F Y ++ S+E+R+ F WI+DL Sbjct: 428 QPDK-MQAEMMKLYREYGVNPLGGCLPMLVQIPIFIGFYTMLQGSVELRNQSFL-WIRDL 485 Query: 466 AAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 D F++P + + P+IM + + +M+P +D Q + WMP Sbjct: 486 TKPDTI----------FHIPTLGLDINPLPLIMVGTQILLSRMTPQASDNPQLKVFQWMP 535 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQ 552 V F+ +F + L +YW+ +N+++IVQ Sbjct: 536 VFFLVFFYNFASALSLYWTVNNLVTIVQ 563 >gi|325969856|ref|YP_004246047.1| membrane protein oxaA [Spirochaeta sp. Buddy] gi|324025094|gb|ADY11853.1| Membrane protein oxaA [Spirochaeta sp. Buddy] Length = 604 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 121/413 (29%), Positives = 198/413 (47%), Gaps = 41/413 (9%) Query: 176 EHYLFKIVDTVTNNSIDQ---IRFSPRGRIMRHKPQTA------TNTFGVQEGFIAVLGD 226 + YLF+I D T NS+++ + F + +PQ N + + +I G Sbjct: 187 KDYLFQI-DVDTKNSVNKAVPLSFENSAYTLAFEPQIGPSFAKLDNNYNYRRFYIKEDGS 245 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + K S+ ++ SW+ + KY++ + IP T++ S+ Q Sbjct: 246 SKKNQVKLSNGAYTTTKPL----SWVALVGKYFSLIAIPD-ATNYTVSLSETSEEGLPLQ 300 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLID---W- 336 + I T F +AG + + Y+ +A + E +D W Sbjct: 301 SSIYITRPAIRSASQTDTFRF-YAGPQLKGDMTIYDDASSNSFGVANLQLEQALDSSSWL 359 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW I K + L+ Y ++ N+G+ I++ T +KL+ +P++KK STA M ++ PK+ Sbjct: 360 GWLETILKTILNLL---YKVIPNYGVGIIILTFLLKLVLYPISKKGMESTAKMSSLSPKM 416 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E++EK+ +P + + M LYK INP+ GC P+LLQ P+ A Y +++ E+R A Sbjct: 417 AEIKEKYPDNPTKQ-NEEMATLYKKEKINPMGGCLPMLLQFPILIAFYGLLNKHFELRGA 475 Query: 457 PFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 F GWI DL+ P +FT LPF L +H + PI+ ++SM MK++ + G Sbjct: 476 MFIPGWIPDLSM--PDTVFTFGFNLPF-LGNQLH--LLPIVYTVSMIYSMKITQNASTAG 530 Query: 516 --QAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q M + MP++F F L + P+GLI+YWS N +SI QQ K E Sbjct: 531 SQQGMMKFMTYGMPLMFFFVLYNAPSGLILYWSVMNALSIFQQLYTNKKKSKE 583 >gi|262200044|ref|YP_003271253.1| membrane protein insertase, YidC/Oxa1 family [Haliangium ochraceum DSM 14365] gi|262083391|gb|ACY19360.1| membrane protein insertase, YidC/Oxa1 family [Haliangium ochraceum DSM 14365] Length = 672 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 86/216 (39%), Positives = 126/216 (58%), Gaps = 22/216 (10%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P FE +D GWF F A P+ L+ F +LVGN+G+AI+L TV VKL P K S Sbjct: 357 PHFEKSVDLGWFGFFAAPLLWLLRMFESLVGNWGVAIVLLTVLVKLTLLPFTTKSMRSMK 416 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M ++PKI+ L++K+K Q Q+ M+ LY+TH +NP+AGC P+LLQ+P++FA+Y+++ Sbjct: 417 QMSKLRPKIEALQKKYKDD-RQRQQEEMMALYRTHGVNPVAGCLPMLLQMPIWFALYRML 475 Query: 448 SISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + E+ HAP GWI DL A D P+Y I PI++ + MF+Q K Sbjct: 476 MTAGELYHAPLVPGWIDDLTAVD-----------PYY--------ILPILLVVMMFLQAK 516 Query: 507 MSPP-PADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 +SP P Q M++ +P+ F P+GL +Y Sbjct: 517 LSPTQPDSPQQKMMMYGLPLSFGVFSFFLPSGLTLY 552 >gi|149176568|ref|ZP_01855181.1| hypothetical protein PM8797T_30327 [Planctomyces maris DSM 8797] gi|148844681|gb|EDL59031.1| hypothetical protein PM8797T_30327 [Planctomyces maris DSM 8797] Length = 707 Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 98/380 (25%), Positives = 186/380 (48%), Gaps = 45/380 (11%) Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKY-------SDIEKSSISNFHESNSWLGISDKYWA 260 + A NT ++ I L D VE + ++ + + + + G+ +Y+A Sbjct: 258 ENAENTRKYRDLRIGFLQDDKSVETEIFTAPDIIENVNAQQVEKYSRAFQYAGVDIQYFA 317 Query: 261 SVFIPSK------------ETSFHS-------QFKYLSDGHARYQAKFSANEITILPGKS 301 ++ P ++++ + Q + +R + ++ ++ + PG Sbjct: 318 ALLTPDGKNYDPQLVNGEMQSNYSASIEPVLVQRGLRDETQSRITVQVNSKDLDLAPGGD 377 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 IT + ++ G K E L P ++D G F +AK M L++ + ++ Sbjct: 378 ITHSYAMYTGPKR-------ESLLGPPLNATEIMDLGIFGPVAKLMLWLLTTLHGFGLSY 430 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 GIAI+ T+ V+ +PL++KQ + MK +QP+I EL++K+ + L +A ++L+ Sbjct: 431 GIAIICLTIIVRGSLYPLSRKQAIGAQKMKELQPQIAELKKKYGDDR-EKLGRAQMELFS 489 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +N NPLAGC PI +Q+P+FF +Y ++ ++++R PF W+ +LAA P +F + + Sbjct: 490 KNNYNPLAGCLPIFMQLPIFFGLYTALNNAVQLRGTPFL-WVDNLAA--PDALFQMPFAI 546 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQAM---ILNWMPVVFVFALSSFPA 536 PF F + PI+ +Q K+ PPP DK Q + I+N+M + F PA Sbjct: 547 PFLGDQF---NLLPIVTVGLFVMQQKLFMPPPTDKDQELQHKIMNYMMIGMGFMFYHVPA 603 Query: 537 GLIIYWSWSNVISIVQQAVI 556 GL +Y+ S++ I ++ ++ Sbjct: 604 GLCVYFIASSLWGICERKLL 623 >gi|313681706|ref|YP_004059444.1| protein translocase subunit yidc [Sulfuricurvum kujiense DSM 16994] gi|313154566|gb|ADR33244.1| protein translocase subunit yidC [Sulfuricurvum kujiense DSM 16994] Length = 536 Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 122/362 (33%), Positives = 192/362 (53%), Gaps = 52/362 (14%) Query: 203 MRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI-SNFHESNSWLGISDKYWAS 261 + PQ V G I GD + D+E SI ++ H ++S+ D+Y+AS Sbjct: 199 LGQHPQVIEQMMTVVGGMI-YSGDNLTTIFEDKDVEGRSIFTDVHFASSF----DQYYAS 253 Query: 262 VFIP-SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF---AGAKEFPT 317 + SKET + D A+ +N +T L G T NF F G KE T Sbjct: 254 IIYGFSKETQVYV------DRDAQ------SNPVTYLEG----TNNFTFNGYIGPKEHKT 297 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + P I++GWF F+A P+F ++ + + L+GN+G +I+ T+ +++ +P Sbjct: 298 LEAIN-----PVLTNAIEYGWFTFVAAPIFKILMWLHGLLGNWGWSIIALTIIIRIFLYP 352 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 L K VS +K I P+I E++EK+K P + + A++++YK H NPL GC P+LLQI Sbjct: 353 LTHKGMVSMQKIKEIAPRIKEVQEKYKGDPAR-MNAAVMEMYKKHGANPLGGCLPLLLQI 411 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 PVFFAIY+V+ ++E++ A + W+ DL+ D P+Y I PI+M Sbjct: 412 PVFFAIYRVLLNAVELQGAEWVMWVHDLSRMD-----------PYY--------ILPILM 452 Query: 498 SLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +M+ Q K++P D Q I ++PV+F F +FPAGL++YW +N+ SI QQ ++ Sbjct: 453 GATMYYQQKITPSNFTDPLQEKIFKFLPVIFTFFFFTFPAGLVLYWFVNNIFSIAQQYLV 512 Query: 557 MK 558 K Sbjct: 513 NK 514 >gi|78187971|ref|YP_376014.1| Oxa1/60 kDa IMP family protein [Chlorobium luteolum DSM 273] gi|123582400|sp|Q3B110|OXAA_PELLD RecName: Full=Inner membrane protein oxaA gi|78167873|gb|ABB24971.1| protein translocase subunit yidC [Chlorobium luteolum DSM 273] Length = 585 Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 93/330 (28%), Positives = 173/330 (52%), Gaps = 28/330 (8%) Query: 236 DIEKSSISNFHESNS---WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 D EK S E + W+ + +KY+ + IP T+ G+A Y+ ++ Sbjct: 240 DAEKDGRSYREEQSGDARWVAVRNKYFIAALIPEDRTAGFYLDGQKERGNA-YENYLASL 298 Query: 293 EITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY-------FIAK 344 ++ + + + + F L+ G ++ T+ D+ E ++D+GW + F+ Sbjct: 299 KMEVPASEEVVDSRFSLYLGPLDYNTVKAQHADI-----EKIMDFGWDWLTRPFAEFVIL 353 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P F M+ F V N+G+ I++ +KL+ +PL+ S M +QP + EL++K+K Sbjct: 354 PAFTWMNRF---VSNYGLIIIIFAFLIKLVTYPLSTASTKSMKKMAALQPMLKELQDKYK 410 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 +P + LQ + ++YK +NPL GC P++LQ+P+ FA++ V S+++R F W+KD Sbjct: 411 DNPAK-LQSELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQLRQHGFL-WVKD 468 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM- 523 L+ P +I +P Y H+ + PI+M++++F+Q K++P Q I+ +M Sbjct: 469 LSV--PDSILDFGFTIPMY---GSHIALLPILMAVTVFLQQKITPTAQSNDQMKIMLYMF 523 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P + + ++ P+GL +Y+ NV S+ QQ Sbjct: 524 PAMMLLFFNNMPSGLALYYLMFNVFSVAQQ 553 >gi|325107204|ref|YP_004268272.1| membrane protein oxaA [Planctomyces brasiliensis DSM 5305] gi|324967472|gb|ADY58250.1| Membrane protein oxaA [Planctomyces brasiliensis DSM 5305] Length = 680 Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 94/331 (28%), Positives = 176/331 (53%), Gaps = 30/331 (9%) Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETS-----FHSQFKYLSDGHARYQAKFS---- 290 S I + ++GI +Y+A++ IP + +Q + G + S Sbjct: 288 SGIDSLQAPVRYVGIDGQYFAALLIPDENQEDENWIAQTQPQLTKRGTDEQSSLISLTLV 347 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 +N + + ++T T L+ G K + ++ D +I++GWF I+K M +M Sbjct: 348 SNPVELPANGAVTHTYTLYTGPKRTSLLRPFDAD-------AIIEYGWFGAISKLMLAIM 400 Query: 351 SYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 ++F+N L +G+AI++ TV V+ +P+++K ++ MK +QP+I+E+R+K++ + Sbjct: 401 NFFHNTLYLPYGLAIVMLTVIVRGAMYPISRKHALAAKKMKEMQPRIEEIRKKYEND-KE 459 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L KA +++ K +GC P+LLQ+P+F +Y+ + +S+++R A F WI +LAA Sbjct: 460 KLAKAQMEIMKESGF--FSGCLPMLLQLPIFIGLYQALYVSVDLRMAEFL-WINNLAA-- 514 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQAMILNWMPVVFV 528 P +F + LPF F + P++ +Q KM +PPPA++ QA+ M + + Sbjct: 515 PDRLFQMPFSLPFLGNDF---NLLPMLTVALFVMQQKMFAPPPANEEQALQQKMMGYMMI 571 Query: 529 FALSSF---PAGLIIYWSWSNVISIVQQAVI 556 F F PAGL IY+ S++ +I ++ ++ Sbjct: 572 FIGVMFYRVPAGLCIYFIASSLWAICERKIL 602 >gi|193213717|ref|YP_001999670.1| 60 kDa inner membrane insertion protein [Chlorobaculum parvum NCIB 8327] gi|254772767|sp|B3QLY4|OXAA_CHLP8 RecName: Full=Inner membrane protein oxaA gi|193087194|gb|ACF12470.1| 60 kDa inner membrane insertion protein [Chlorobaculum parvum NCIB 8327] Length = 587 Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 98/331 (29%), Positives = 172/331 (51%), Gaps = 29/331 (8%) Query: 239 KSSISNFHESNS----WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 K S + E S W+ + +KY+ + IP +ET DG ++ +A ++ Sbjct: 240 KDSKKRYQEEESGKAEWVAVRNKYFVAAMIPERETEGVFLQGTKKDG-VDFENYTAALKM 298 Query: 295 TILPGK-SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY-------FIAKPM 346 I G+ S+T L+ G ++ T+ DL E ++D+GW + ++ P+ Sbjct: 299 MIPAGQNSVTDRYRLYVGPLDYNTVRSLHVDL-----EKIMDFGWDWLTRPFAEYLILPI 353 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F M+ + V N+G+ I++ +K + +PL+ S M +QP + E++EK+K Sbjct: 354 FNWMNKY---VTNYGLIIIIFAFLIKTVTWPLSLASTKSMKKMSALQPMMKEIQEKYKND 410 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 P + LQ + ++YK +NPL GC P ++Q+P+ FA++ V S+++R F W+KDL+ Sbjct: 411 PAK-LQSELGRIYKEAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQLRQHGFL-WVKDLS 468 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PV 525 P +I LP Y H+ + PI+M++++F Q K++P Q I+ WM P Sbjct: 469 V--PDSILDFGFKLPLYGD---HIALMPILMAVTVFFQQKITPTTQTNDQMKIMIWMFPA 523 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + + ++ P+GL +Y+ NV SI QQA I Sbjct: 524 MMLLFFNNMPSGLALYYLMFNVFSIAQQAYI 554 >gi|268318300|ref|YP_003292019.1| 60 kDa inner membrane insertion protein [Rhodothermus marinus DSM 4252] gi|262335834|gb|ACY49631.1| 60 kDa inner membrane insertion protein [Rhodothermus marinus DSM 4252] Length = 607 Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 99/330 (30%), Positives = 171/330 (51%), Gaps = 25/330 (7%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF--KYLSDGHARYQAKFSANE 293 D +++ W+ + +K++ +V IPS ET + Y ++A Sbjct: 246 DGQRTEEKRLAGQVDWVAVKNKFFTAVMIPSGETRGAELVGERLGEPEDPSYWEDYAARL 305 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF------IAKPMF 347 + P L+ G E+ + Y+ L ++M +D+GW F +AK +F Sbjct: 306 LMPRPEDGQVDEFRLYLGPMEYFRLARYDLGL----YDM-VDYGWDAFEWMTRPLAKFVF 360 Query: 348 M-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 + L + L+GN+G+AI++ + VK+ +PL + + + A M+ +QP+++ +REK+ + Sbjct: 361 IPLFTLLGRLLGNYGLAIIVFALLVKIALYPLTRASFRNMAKMRELQPELEAIREKYADN 420 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ Q+A+++LY+ INPL GC P+LLQ PV A+++ SL +R F W KDL+ Sbjct: 421 -PQKQQEALMKLYREKKINPLGGCLPMLLQWPVLIALWQYFQQSLIVRQQAFL-WAKDLS 478 Query: 467 AADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMKM-SPPPADKGQAMILNWMP 524 A DP LPF +P + V + ++M LSM IQM++ S Q IL ++ Sbjct: 479 APDP------ILHLPFKIPLYGDFVAGFTLLMGLSMIIQMRIQSASTPSNPQTKILTYVF 532 Query: 525 VVFVFAL-SSFPAGLIIYWSWSNVISIVQQ 553 VF+FA+ + + L +Y+ N+ S +QQ Sbjct: 533 PVFIFAIFNRLSSALNLYYLCYNIFSAIQQ 562 >gi|307717725|ref|YP_003873257.1| hypothetical protein STHERM_c00080 [Spirochaeta thermophila DSM 6192] gi|306531450|gb|ADN00984.1| hypothetical protein STHERM_c00080 [Spirochaeta thermophila DSM 6192] Length = 573 Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 122/407 (29%), Positives = 200/407 (49%), Gaps = 41/407 (10%) Query: 176 EHYLFKIVDTVTN--NSIDQIRFSPRGRIMRHKPQ-----TATNTFGVQEGFIAVLGDKS 228 E YLF + + N NS + F + PQ A + +G F L K Sbjct: 178 EEYLFDLEVELVNSENSSLPLNFEGVMYTLDTGPQIGPPFAALDRYGEYRKFFYFLNGK- 236 Query: 229 LVEQKYSDIEKSSISNFHESN-SWLGISDKYWASV---FIPSKETSFHSQFKY-LSDGHA 283 +K ++ IS E + +W+ IS KY+ + +P + +F + + L G Sbjct: 237 ---RKEVRLDPGKISELEEGDPTWVAISGKYFTLIAIPLLPQYDVAFSTVVEGDLPLGST 293 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD------LAIPRFEMLID-- 335 Y + +A IT + G K + Y K L+ E ++D Sbjct: 294 VYLYRPAAR------SARITDLYRFYVGPKISGELSKYNKKNENSAGLSELHLEKVVDTS 347 Query: 336 -WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 GW I K + F+ ++ N+G+AI+L T+FVK+L FPL K Y S + M+ + P Sbjct: 348 LLGWLEGILK---FFLQIFFRIIPNYGVAIILLTLFVKILLFPLTHKSYESASKMQQLAP 404 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 K++E+R ++K PQ + + + LY+ +NPL GC P+LLQIP+FFA+Y + S ++R Sbjct: 405 KMEEVRNRYKDD-PQRMNQELALLYQKEGVNPLGGCLPLLLQIPIFFAMYGLFSSHFDLR 463 Query: 455 HAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 A F GWI DL+ P ++F LP L G+ + + P+I+ ++ I K++ + Sbjct: 464 GATFIPGWIDDLSV--PESVFHFDTPLP--LLGWTDIRLLPLILVVTQIISTKITQGASS 519 Query: 514 KGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q + + +PVVF+F L + PAGL++YW N+ +I QQ I ++ Sbjct: 520 SSQNQVFMYVLPVVFLFILYNAPAGLLVYWVAMNIFTIAQQLYINRV 566 >gi|315187341|gb|EFU21097.1| membrane protein insertase, YidC/Oxa1 family [Spirochaeta thermophila DSM 6578] Length = 573 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 114/369 (30%), Positives = 187/369 (50%), Gaps = 34/369 (9%) Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASV--- 262 P A + +G F L K +K ++ IS E + +W+ IS KY+ + Sbjct: 216 PFAALDRYGEYRKFFYFLNGK----RKEVRLDPGKISELEEGDPTWVAISGKYFTLIAIP 271 Query: 263 FIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 +P + +F + + L G Y + +A IT + G K + Y Sbjct: 272 LLPQYDVAFSTVAEGDLPLGSTVYLYRPAAR------SARITDLYRFYVGPKISGELSKY 325 Query: 322 EKD------LAIPRFEMLID---WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 K L+ E ++D GW I K + F+ L+ N+G+AI+L T+FVK Sbjct: 326 NKKNENSAGLSELHLEKVVDTSLLGWLEGILK---FFLQIFFRLIPNYGVAIILLTLFVK 382 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 +L FPL K Y S + M+ + PK++E+R ++K PQ + + + LY+ +NPL GC P Sbjct: 383 ILLFPLTHKSYESASKMQQLAPKMEEVRNRYKDD-PQRMNQELALLYQKEGVNPLGGCLP 441 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 +LLQIP+FFA+Y + S ++R A F GWI DL+ P ++F LP L G+ + Sbjct: 442 LLLQIPIFFAMYGLFSSHFDLRGATFIPGWIDDLSV--PESVFHFDTPLP--LLGWTDIR 497 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISI 550 + P+I+ ++ I K++ + Q + + +PVVF+F L + PAGL++YW N+ +I Sbjct: 498 LLPLILVVTQIISTKITQGASSSSQNQLFMYVLPVVFLFILYNAPAGLLVYWVAMNIFTI 557 Query: 551 VQQAVIMKM 559 QQ I ++ Sbjct: 558 AQQLYINRV 566 >gi|21672847|ref|NP_660912.1| Oxa1/60 kDa IMP family protein [Chlorobium tepidum TLS] gi|38503043|sp|Q8KGG2|OXAA_CHLTE RecName: Full=Inner membrane protein oxaA gi|21645895|gb|AAM71254.1| oxa1/60kDa IMP family protein [Chlorobium tepidum TLS] Length = 590 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/345 (28%), Positives = 181/345 (52%), Gaps = 32/345 (9%) Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS---FHSQFKYL 278 A LG S+V+ D +K+ W+ + +KY+ + +P + T H K Sbjct: 231 AYLGG-SVVKLDAKDAKKTWQDEESGKAQWVAVRNKYFVAAIMPQRTTDGIYLHGTKKDG 289 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 SD ++ +A +++ G+ ++ L+ G ++ T+ DL E ++D+G Sbjct: 290 SD----FKNYVAALKMSFPAGQQSVDDHYRLYVGPLDYNTVKSLNADL-----EKIMDFG 340 Query: 338 WFY-------FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 W + ++ P+F M+ + V N+G+ I++ +KL+ +PL+ S M Sbjct: 341 WDWLTRPFAEYLILPIFNWMNKY---VTNYGLIIIIFAFLIKLVTWPLSLASTKSMKKMS 397 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QP + EL+EK+K +P + LQ + ++YK +NPL GC P ++Q+P+ FA++ V S Sbjct: 398 ALQPVMKELQEKYKDNPAK-LQSELGRIYKEAGVNPLGGCLPTVIQMPLLFAMFYVFRSS 456 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +++R F W+KDL+ P +++ LP Y H+ I PI+M++++F Q K++P Sbjct: 457 IQLRQHGFL-WVKDLSV--PDSVYHFAFKLPLYGD---HIAIMPILMAVTVFFQQKITPN 510 Query: 511 PADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 Q I+ W+ P + +F ++ PAGL +Y+ N+ S+ QQA Sbjct: 511 AQSNEQTKIMMWLFPAMMLFFFNNMPAGLALYYLMFNIFSVAQQA 555 >gi|511459|gb|AAA56919.1| 60 kDa inner membrane protein [Coxiella burnetii] Length = 487 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/327 (30%), Positives = 169/327 (51%), Gaps = 13/327 (3%) Query: 156 IKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 ++L + + +L +T + + Y + V NN+ + S +I R +P T + F Sbjct: 165 VQLTGRAPDGLLVTKTYTFHRDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHF 224 Query: 215 GVQEGFIAVLGDKSLVEQK--YSDIEKSSISNFHESNSWLGISDKYWASVFIPSK-ETSF 271 V+ A +G +K Y ++K +I +S W+ + Y+ S ++P E ++ Sbjct: 225 YVRSYNGASMGSPQTPYEKLSYESLDKQNIDRTSQSG-WIAMQQHYFLSAWVPGNPELTY 283 Query: 272 H--SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 H S SD Y F + ++ + G T L+ G P I K LA P Sbjct: 284 HYYSHVIPASDEPNVYVVGFVSPQMNVAAGSEAATHATLYVG----PEIAKRLKGLA-PG 338 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E ID+GW + I+ +F ++S + +V N+G +I++TT+ +K++F+ + K + S A M Sbjct: 339 LERTIDYGWLWPISMLLFWILSAVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARM 398 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L+E+ Q L +A ++LY+ INPL GC P+L+Q+PVF A Y VI Sbjct: 399 REMQPRIQALKERHGDDR-QALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIE 457 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTL 476 S+++R APF WI DL+ DP I L Sbjct: 458 SVQLRQAPFIFWIHDLSVKDPYYICPL 484 >gi|183219716|ref|YP_001837712.1| inner membrane protein OxaA [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909851|ref|YP_001961406.1| preprotein translocase subunit YidC [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774527|gb|ABZ92828.1| Preprotein translocase, YidC subunit [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778138|gb|ABZ96436.1| Inner membrane protein OxaA; putative membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 649 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 125/215 (58%), Gaps = 7/215 (3%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ Y ++ N+G AI++ + KL F+PL KKQ S M+ + P+I + EK+ P Sbjct: 411 ILKKIYLVIPNYGWAIVIFAILFKLAFYPLNKKQAESMKKMQELSPQIKLINEKYADDP- 469 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 ++ Q+ I+LYK + NP+AGC P+L+QIP+F A+Y S ++++ ++PF WIKDL+ Sbjct: 470 KLKQEKTIELYKKNGTNPMAGCLPMLIQIPIFIALYTAFSDTVDLWNSPFL-WIKDLSEP 528 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 D T+F G + + I P+IM + +Q KM+ D Q M++ MPV+ + Sbjct: 529 D-----TVFTTPKLAFIGTLAINILPLIMVATQVVQSKMTTVSTDPNQKMMMYMMPVIML 583 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + S PAG+ +YW+ N++SI QQ K +E Sbjct: 584 YFFWSMPAGVTMYWTMQNILSIAQQVYTNKFVKSE 618 >gi|254444960|ref|ZP_05058436.1| 60Kd inner membrane protein [Verrucomicrobiae bacterium DG1235] gi|198259268|gb|EDY83576.1| 60Kd inner membrane protein [Verrucomicrobiae bacterium DG1235] Length = 605 Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 93/271 (34%), Positives = 145/271 (53%), Gaps = 14/271 (5%) Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 I + G S+T +AG KEF I +K E + +G+F I+K + +M+ Sbjct: 323 INLPAGASVTKRFDFYAGPKEFTRIGKLDKGQ-----EQAMQFGFFGIISKFLLQIMNGI 377 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 +VGN+G+AI+L T+ V+ P+ S M +Q + L+EKF Q Q+ Sbjct: 378 QGVVGNWGVAIILLTLIVRGALLPITLLSMKSMKKMSKLQEPMKALKEKFPDDT-QKQQQ 436 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYK + INP+AGC P+LLQIP+FFA++ ++ + E+R A F WI DL+ D Sbjct: 437 HMMELYKLNKINPVAGCLPMLLQIPIFFALFYMLRSAAELRFADFL-WISDLSKPDTIAT 495 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM-KMSPPPADKGQAMILNWMPVVFVFALS 532 F IL G + + P + +++ QM M P D QA ++ +MP +F Sbjct: 496 IPNFPIL-----GDFALNLLPFVWVITLAYQMWTMPTPSVDNAQAKMMKFMPFIFFPFTY 550 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F +GL++YW+ SNV +I QQ ++ K G E Sbjct: 551 MFSSGLVLYWTVSNVFTIGQQWLV-KRGGDE 580 >gi|182413290|ref|YP_001818356.1| 60 kDa inner membrane insertion protein [Opitutus terrae PB90-1] gi|177840504|gb|ACB74756.1| 60 kDa inner membrane insertion protein [Opitutus terrae PB90-1] Length = 604 Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 94/326 (28%), Positives = 168/326 (51%), Gaps = 34/326 (10%) Query: 250 SWLGISDKYWASVFIPSKE-----TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 +W +S++++AS+ P + T L D + SA + + P + Sbjct: 264 AWACVSNQFFASILTPDQPGSGLITRRVKLLPMLPDENRNAYGITSAAQFDLTPLAANAE 323 Query: 305 TNF---LFAGAKEFPTIHH---YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY----FY 354 T + G KE+ + + ++KD + ++ +G+F F ++ + LM++ F Sbjct: 324 TKLGADFYVGPKEYRRLANGDVFKKDQ-----DKVMQFGFFKFFSQILLTLMTWVHGWFP 378 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + +G A+++TT+ +K++F P S M IQP++ +REKFK +P Q LQ A Sbjct: 379 SAAWAWGWAVVITTLILKIIFVPFTLAASRSAKRMAKIQPEMQAVREKFKDNP-QKLQAA 437 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 ++L+K H +NP+ GC+PIL+ IP F ++++ + E+R PF W DL+A D Sbjct: 438 TMELFKKHKVNPMGGCFPILITIPFFIGFFQMLQSAAELRFQPFL-WAYDLSAPD----- 491 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSS 533 T+ I PF L I P++M ++ IQM+++P PA D Q ++ +MP + + Sbjct: 492 TVLHIGPFPL------NIMPLLMGATIVIQMRLTPSPAVDNMQVKMMKFMPYIMTMFCYT 545 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKM 559 F L +Y + + + +I QQ VI +M Sbjct: 546 FSCALALYSTVNGIFTIGQQLVINRM 571 >gi|189347989|ref|YP_001944518.1| 60 kDa inner membrane insertion protein [Chlorobium limicola DSM 245] gi|254772766|sp|B3EIM7|OXAA_CHLL2 RecName: Full=Inner membrane protein oxaA gi|189342136|gb|ACD91539.1| 60 kDa inner membrane insertion protein [Chlorobium limicola DSM 245] Length = 583 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 89/313 (28%), Positives = 170/313 (54%), Gaps = 26/313 (8%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF-L 308 W+ + +KY+ + IP +T + G ++ ++ ++++ + + + +F L Sbjct: 253 GWVAVRNKYFVAALIPGSKT--EGIYLEGKKGSGHFEEYLASLKMSVPSTEKVASNHFSL 310 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY-------FIAKPMFMLMSYFYNLVGNFG 361 + G ++ T+ + +L E ++D+GW + ++ P+F M+ F + N+G Sbjct: 311 YIGPLDYNTVKTLDANL-----EKIMDFGWDWLTRPFAEYVILPVFTWMNGF---ISNYG 362 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 + I++ + +KL+ +PL+ S M +QP + EL+EK+K +P + LQ + ++YK Sbjct: 363 LIIIIFALLIKLVTYPLSMASTKSMKKMAALQPMLKELQEKYKDNPAK-LQSELGRIYKE 421 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NPL GC P++LQ+P+ FA++ V S+++RH F W KDL+ P +I +P Sbjct: 422 AGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQLRHHGFL-WAKDLSV--PDSILDFGFSIP 478 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLII 540 Y H+ ++PI+M +++FIQ K++P Q M+L PV + ++ PAGL + Sbjct: 479 VYGD---HIAVFPILMGVTVFIQQKITPTTQSNDQMKMMLYIFPVTMLLFFNNLPAGLGL 535 Query: 541 YWSWSNVISIVQQ 553 Y+ NV S+ QQ Sbjct: 536 YYLMFNVFSVAQQ 548 >gi|225164119|ref|ZP_03726399.1| 60 kDa inner membrane insertion protein [Opitutaceae bacterium TAV2] gi|224801254|gb|EEG19570.1| 60 kDa inner membrane insertion protein [Opitutaceae bacterium TAV2] Length = 616 Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 89/326 (27%), Positives = 160/326 (49%), Gaps = 36/326 (11%) Query: 251 WLGISDKYWASVFIPS---------KETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 W + ++++AS++ P + SF + + + A I P + Sbjct: 266 WASVKNQFFASIYTPDDKLIEGVTVRRVSFAAPLPGTTTENIGLTASAKVELPAIAPQGT 325 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF--------IAKPMFMLMSYF 353 T T L+ G KE+ + ++ + + ++ + ++F IA M M+M+ Sbjct: 326 ATFTGKLYVGPKEYTRLKNFTRGE-----DKVMQFDRYFFNRIFLSGVIAPFMNMMMNGI 380 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + VGN+G+AI+L T+ +K + P S M+ +QP + E+ EK+K +P + Q Sbjct: 381 HAFVGNWGLAIVLMTLILKTVTLPFTLAASRSAKRMQKLQPMMKEINEKYKDNPTKKNQ- 439 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A++ L+K H +NP+ GC P+L+ IP+F A + ++ + E+R F W +DL+A D Sbjct: 440 AVMALFKEHKVNPMGGCLPVLITIPLFVAFFAMLQGTAELRFQSFL-WARDLSAPDTIAR 498 Query: 474 FTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFA 530 L GFM + I P++M +M QM+++P P+ D QA I MP +F Sbjct: 499 IPL---------GFMTLPINILPLLMGATMVFQMRLTPSPSVDNAQAKIFKMMPWIFTII 549 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVI 556 +F L +Y + + + +IVQQ + Sbjct: 550 CYNFSCALALYSTINGLYTIVQQLAV 575 >gi|313205343|ref|YP_004044000.1| protein translocase subunit yidc [Paludibacter propionicigenes WB4] gi|312444659|gb|ADQ81015.1| protein translocase subunit yidC [Paludibacter propionicigenes WB4] Length = 632 Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 107/356 (30%), Positives = 188/356 (52%), Gaps = 38/356 (10%) Query: 228 SLVEQKY--SDIEKSSISNFHESN-----SWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 S +E KY D+EK S S E W+ D++++S+ I ++ + + L Sbjct: 239 SSIEYKYVADDVEKLSESKNDEKKLTNKVKWIAFKDQFFSSILIANEALNSTTLKSTLEG 298 Query: 281 GHARYQAKFSAN-EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID---- 335 ++ Y + AN + P + TT + G + T+ Y+KD A E+ ++ Sbjct: 299 ENSGYLKTYDANMSVAFDPTGKVPTTFRWYFGPNHYKTLTAYDKD-AKDGHELTLNKLIP 357 Query: 336 --WGWFYFIAK----PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 WG F ++ + PMF ++F + NFG+ I+L T+ +KL+ FPL K Y+S+A M Sbjct: 358 LGWGIFGWVNRFAIIPMF---NFFNKFISNFGLIILLLTLVIKLVLFPLTYKSYMSSAKM 414 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + ++P+IDE+ + P QKA ++LY ++P++GC P LLQ+P+ FA++ Sbjct: 415 RVLKPEIDEINARIPADKPAERQKATMELYGKVGVSPMSGCIPSLLQMPILFAMFSFFPA 474 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP-GFM-HVGIWPIIMSLSMFIQMKM 507 ++E+R F W DL+A D +I T LPF +P GF HV ++ ++M+ + + K+ Sbjct: 475 AIELRQQSFL-WATDLSAYD--SIMT----LPFTVPFGFGNHVSLFCLLMTATNIVYTKL 527 Query: 508 ---SPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + D+ ++ W MPV+F+F +++ +GL Y+ + +ISI+Q VI Sbjct: 528 NMANQSTTDQPGGAVMKWMMYLMPVMFLFIFNNYASGLSYYYFIATLISIIQTYVI 583 >gi|223937849|ref|ZP_03629749.1| 60 kDa inner membrane insertion protein [bacterium Ellin514] gi|223893455|gb|EEF59916.1| 60 kDa inner membrane insertion protein [bacterium Ellin514] Length = 604 Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 82/266 (30%), Positives = 152/266 (57%), Gaps = 25/266 (9%) Query: 295 TILPGKSITTTNFLFAGAKEFPTIHH----YEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 T+ PG + +F G KE+ T+ + D+ + ++++G F I+K + + M Sbjct: 329 TLAPGGFVERNYDIFTGPKEYKTLARIAARFNNDI-----DKVMEFGLFSPISKMLLLGM 383 Query: 351 SYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 ++ ++ L ++G+ I+L TV +K++F+PL S M+ +QP+I ++EK+K P + Sbjct: 384 NWLHHRLSVSYGLTIILITVLIKIVFWPLTAFSTKSMKRMQALQPQIKAIQEKYKDEPQK 443 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 V QK M + Y+ + +NPL GC P LLQIPVFF + ++ ++E+R A F W+ DL+ D Sbjct: 444 VSQKTM-EFYRKNKVNPLGGCLPALLQIPVFFGFFAMMRGAIELRGAHFL-WMGDLSQPD 501 Query: 470 PTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVV 526 F +PGF + P++M ++M Q+ ++PP D Q ++ +MP++ Sbjct: 502 TI----------FIIPGFNFPINPMPLLMGVTMLWQISLAPPSPGMDPAQQKMMKFMPLM 551 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQ 552 + + S P+GL +Y++ N+++I+Q Sbjct: 552 ILLFVYSQPSGLALYYTVQNLLTILQ 577 >gi|83816022|ref|YP_444208.1| inner membrane protein oxaA [Salinibacter ruber DSM 13855] gi|83757416|gb|ABC45529.1| inner membrane protein oxaA [Salinibacter ruber DSM 13855] Length = 665 Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/326 (28%), Positives = 169/326 (51%), Gaps = 33/326 (10%) Query: 250 SWLGISDKYWASVFIPSK-ETSFHSQFKYLSDGHARYQAKF---SANEITILPGKSITTT 305 SW+ + +KY+ + +P + T+ + +G A +A F + LP ++ Sbjct: 303 SWMAVKNKYFTAAVMPDRPATALGASLTGRKEGRATSEAAFKDLTGRLQMPLPRETTHVD 362 Query: 306 NF-LFAGAKEFPTIHHYEKDLAIPRFEML-IDWGWFYFIAKPM--FMLMSYFYNLVGN-- 359 F L+AG ++ ++ Y ++L + M+ W WF ++ KP+ ++ + L G Sbjct: 363 KFHLYAGPIDYYSLADYGRNL----YGMVNYGWDWFEWMTKPLAEYLYIPMLTYLGGGLP 418 Query: 360 ---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 +G+ ++L V +K + +PL K Y S A M+ +QPK+ E+++K+ P + Sbjct: 419 SWLFGGGLPYGVIVILMAVLIKTVVYPLTKSSYRSMAQMRELQPKMQEIKDKYDDEP-EK 477 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 Q+ M+QLY+ +NPL GC P+ LQ P+ ++Y+ I S+++R F W DL+A P Sbjct: 478 QQEEMMQLYRETGVNPLGGCLPMFLQYPILISLYQFIPKSIQLRQESFL-WAADLSA--P 534 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--SPPPADKGQAMILNW-MPVVF 527 I L +PFY +V + ++M L+M + M++ + A GQA I + MP V Sbjct: 535 DKILQLPFEIPFYGD---YVAGFTLLMGLAMIVTMRVQSTGGGAAGGQAKIFMYAMPGVI 591 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQ 553 F + F +GL +Y+ + N+++ QQ Sbjct: 592 FFIFNRFASGLSLYYLFYNIVTAAQQ 617 >gi|294505868|ref|YP_003569926.1| Inner membrane protein oxaA [Salinibacter ruber M8] gi|294342196|emb|CBH22974.1| Inner membrane protein oxaA [Salinibacter ruber M8] Length = 654 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 94/326 (28%), Positives = 170/326 (52%), Gaps = 33/326 (10%) Query: 250 SWLGISDKYWASVFIPSK-ETSFHSQFKYLSDGHARYQAKF---SANEITILPGKSITTT 305 SW+ + +KY+ + +P + T+ + +G A +A F + LP ++ Sbjct: 292 SWMAVKNKYFTAAVMPDRPATALGASLTGRKEGRATSEAAFKDLTGRLQMPLPRETTHVD 351 Query: 306 NF-LFAGAKEFPTIHHYEKDLAIPRFEML-IDWGWFYFIAKPM-----FMLMSYFYN--- 355 F L+AG ++ ++ Y ++L + M+ W WF ++ KP+ +++Y Sbjct: 352 KFHLYAGPIDYYSLADYGRNL----YGMVNYGWDWFEWMTKPLAEYLYIPMLTYLGTGLP 407 Query: 356 --LVGN---FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 L G +G+ ++L V +K + +PL K Y S A M+ +QPK+ E+++K+ P + Sbjct: 408 SWLFGGGLPYGVIVILMAVLIKTVVYPLTKSSYRSMAQMRELQPKMQEIKDKYDDEP-EK 466 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 Q+ M+QLY+ +NPL GC P+ LQ P+ ++Y+ I S+++R F W DL+A P Sbjct: 467 QQEEMMQLYRETGVNPLGGCLPMFLQYPILISLYQFIPKSIQLRQESFL-WAADLSA--P 523 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--SPPPADKGQAMILNW-MPVVF 527 I L +PFY +V + ++M L+M + M++ + A GQA I + MP V Sbjct: 524 DKILQLPFEIPFYGD---YVAGFTLLMGLAMIVTMRVQSTGGGAAGGQAKIFMYAMPGVI 580 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQ 553 F + F +GL +Y+ + N+++ QQ Sbjct: 581 FFIFNRFASGLSLYYLFYNIVTAAQQ 606 >gi|119358504|ref|YP_913148.1| protein translocase subunit yidC [Chlorobium phaeobacteroides DSM 266] gi|166975858|sp|A1BJZ7|OXAA_CHLPD RecName: Full=Inner membrane protein oxaA gi|119355853|gb|ABL66724.1| protein translocase subunit yidC [Chlorobium phaeobacteroides DSM 266] Length = 579 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 89/313 (28%), Positives = 172/313 (54%), Gaps = 27/313 (8%) Query: 251 WLGISDKYWASVFIPSKET-SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF-L 308 W+ + +KY+ + IP T + + + H ++ +A ++++ + +++ ++ L Sbjct: 253 WVALRNKYFVAAIIPRGATEGIFLEGRKTAATH--FEDYLAALKMSVSATEPVSSNSYSL 310 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY-------FIAKPMFMLMSYFYNLVGNFG 361 + G ++ T+ DL E ++D+GW + +I P F M+ F V N+G Sbjct: 311 YVGPLDYNTVKSLGVDL-----EKIMDFGWDWLTRPFAEYIILPAFTWMNRF---VSNYG 362 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 + I++ + +KL+ +PL+ S M +QP + EL+EK+K +P + LQ + ++YK Sbjct: 363 LIIIIFALLIKLVTYPLSMASTKSMKKMSALQPALKELQEKYKDNPAK-LQSELGRIYKE 421 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NPL GC P++LQ+P+ FA++ V S+++RH F W KDL+ P +I +P Sbjct: 422 AGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQLRHHGFL-WAKDLSV--PDSILDFGFAIP 478 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLII 540 Y H+ ++PI+M++++F+Q K++P Q I+ +M P + + ++ PAGL + Sbjct: 479 MYGD---HIAVFPILMAITVFVQQKITPTAQSNEQMKIMMYMFPAMMLLFFNNLPAGLGL 535 Query: 541 YWSWSNVISIVQQ 553 Y+ N+ S+ QQ Sbjct: 536 YYLMFNIFSVAQQ 548 >gi|110598560|ref|ZP_01386828.1| 60 kDa inner membrane insertion protein [Chlorobium ferrooxidans DSM 13031] gi|110339794|gb|EAT58301.1| 60 kDa inner membrane insertion protein [Chlorobium ferrooxidans DSM 13031] Length = 583 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 92/322 (28%), Positives = 170/322 (52%), Gaps = 27/322 (8%) Query: 251 WLGISDKYWASVFIPSKET-SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF-L 308 W+ + +KY+ + IPS+ T H K + ++ +A ++ + +++ F L Sbjct: 253 WVAVRNKYFVAALIPSRRTEGIHLDGKRTAGNE--FENYTAALKMGVPSTGTVSDDKFSL 310 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY-------FIAKPMFMLMSYFYNLVGNFG 361 + G ++ + L E ++D+GW + FI P+F M+ F V N+G Sbjct: 311 YLGPLDYNIVKSQHAGL-----EKIMDFGWDWLTRPFAEFIILPVFSWMNTF---VSNYG 362 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 + I++ +KL+ +PL+ S M +QP + EL+EK+K +P + LQ + ++YK Sbjct: 363 LIIIIFAFLIKLVTYPLSMASTKSMKKMSALQPVLKELQEKYKDNPAK-LQSELGRIYKE 421 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NP+ GC P++LQ+P+ FA++ V S+E+R F W KDL+ P +I +P Sbjct: 422 AGVNPIGGCLPVVLQMPLLFAMFYVFRSSIELRQHSFL-WAKDLSV--PDSILDFGFSIP 478 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLII 540 Y H+ ++PI+M++++F+Q K++P Q ++ +M P + + ++ PAGL + Sbjct: 479 MY---GNHIAVFPILMAVTVFMQQKITPTTQSNDQMKVMMYMFPAMMLLFFNNMPAGLGL 535 Query: 541 YWSWSNVISIVQQAVIMKMHGA 562 Y+ N+ S+ QQ I K A Sbjct: 536 YYLMFNIFSVAQQFYINKTTTA 557 >gi|194337886|ref|YP_002019680.1| 60 kDa inner membrane insertion protein [Pelodictyon phaeoclathratiforme BU-1] gi|254773008|sp|B4SHH0|OXAA_PELPB RecName: Full=Inner membrane protein oxaA gi|194310363|gb|ACF45063.1| 60 kDa inner membrane insertion protein [Pelodictyon phaeoclathratiforme BU-1] Length = 583 Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 101/354 (28%), Positives = 183/354 (51%), Gaps = 34/354 (9%) Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 A LG SLV+ S ++S W+ + +KY+ + IP +++ YL DG Sbjct: 225 AYLGG-SLVKLDASKEKQSYREEQSGEAQWVAVRNKYFVAALIPHGKSAGI----YL-DG 278 Query: 282 HAR----YQAKFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 +++ +A +I + + F L+ G ++ + + L E ++D+ Sbjct: 279 KRETGNDFESYLAALKIAVPSTAGVVDDKFSLYLGPLDYNIVKAQKVGL-----EKIMDF 333 Query: 337 GWFY-------FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 GW + FI P+F M+ F V N+G+ I++ +KL+ +PL+ S M Sbjct: 334 GWDWLTRPFAEFIILPVFSWMNGF---VSNYGLIIIIFAFLIKLVTYPLSMASTKSMKKM 390 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +QP + EL+EK+K +P + LQ + ++YK +NP+ GC P++LQ+P+ FA++ V Sbjct: 391 SALQPALKELQEKYKDNPAK-LQSELGRIYKEAGVNPIGGCLPVVLQMPLLFAMFYVFRS 449 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+E+R F W KDL+ P +IF +P Y H+ ++PI+M++++++Q K++P Sbjct: 450 SIELRQHSFL-WAKDLSV--PDSIFDFGFAIPMYGS---HIAVFPILMAVTVYLQQKITP 503 Query: 510 PPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 Q ++ +M P + + ++ PAGL +Y+ N+ S+ QQ I K A Sbjct: 504 TTQSNEQMKVMMYMFPAMMLLFFNNMPAGLGLYYLMFNIFSVAQQFYINKTTTA 557 >gi|167751879|ref|ZP_02424006.1| hypothetical protein ALIPUT_00121 [Alistipes putredinis DSM 17216] gi|167660120|gb|EDS04250.1| hypothetical protein ALIPUT_00121 [Alistipes putredinis DSM 17216] Length = 653 Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 99/353 (28%), Positives = 185/353 (52%), Gaps = 31/353 (8%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 G+ S + SD EK + S +W+ ++++SV I + S+ ++ + Sbjct: 267 GESSADDLGISDGEKQKTVS--SSLNWVAFKQQFFSSVMIAPENFSYADMKFTTAEKGSG 324 Query: 285 YQAKFSANEITILPGKSITTTNFLFA-GAKEFPTIHHY-----EKDLAIPRFEMLIDWGW 338 Y FSA ++T+ NF F G ++ + H + +L + R + + WG Sbjct: 325 YIKDFSA-KLTVPYTAQTDHYNFAFYFGPNKYAILKHVATTEGDDELHLERL-IPLGWGI 382 Query: 339 FYFIAK----PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 F ++ + P+F + F + +FG+ I++ V VK++ PL K Y+STA M+ I+P Sbjct: 383 FGWVNRWFVIPVFDFLRQF---IPSFGLIILILAVLVKVIISPLTYKSYISTAKMRVIKP 439 Query: 395 KIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 ++DEL +K+ +Q Q+A ++LYK INP+ GC P+L+Q+P+ A+++ S+E+ Sbjct: 440 EVDELAKKYPRQEDAMKRQQATMELYKKAGINPMGGCIPLLIQMPIIIAMFRFFPASIEL 499 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-------QMK 506 R F W DL++ D ++ +L +PFY HV ++ ++M++++F Q Sbjct: 500 RGQHFL-WADDLSSYD--SVLSLPFNIPFYGD---HVSLFALLMTVALFAFSYINYQQTA 553 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 S P + M++ MPV+ + +S+ +GL Y+ +N+++I Q VI +M Sbjct: 554 SSQPQMAGMKFMMVYLMPVMMLLWFNSYSSGLTYYYFLANILTIGQTLVIRRM 606 >gi|86140337|ref|ZP_01058896.1| putative inner membrane protein translocase component YidC [Leeuwenhoekiella blandensis MED217] gi|85832279|gb|EAQ50728.1| putative inner membrane protein translocase component YidC [Leeuwenhoekiella blandensis MED217] Length = 621 Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 135/521 (25%), Positives = 254/521 (48%), Gaps = 77/521 (14%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK-NAYFAELDYVST 129 EL+N L ++ KG + L+ + S +S V L+ N++ N F ST Sbjct: 98 TELENDVLALKVSNKGGFITEARLKNFK---SYDSVPVYLIKDGNSRFNLTF------ST 148 Query: 130 ANNIELPNSNTVWN-LISGKILTPTTPIKLVFKNANNILFERTISLDEHY---------L 179 +N L + N + +S + +KL ++ + + T++ D++ L Sbjct: 149 TDNRTLNSENLYFEPSLSKEGENQVLSMKLKVSDSEYLEYRYTLTPDDYMMGFGIKTVGL 208 Query: 180 FKIVDTVTNNSID-QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL---GDKSLVEQKYS 235 +V+T ++D Q++ + + ++ + T+ +EG L GD +E + Sbjct: 209 QNVVNTSQPINLDWQLKGYRHAKSITYENRYTRLTYEYEEGDHDKLDQTGDDDAIE---T 265 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFI---PSKETSFHSQFKYLSDGHAR--YQAKFS 290 D++ W +++S+ + P E F S+ + D Y +++ Sbjct: 266 DVD------------WFNFRQHFFSSILLTDQPFDEVRFSSK-NLVEDEEVDTVYTKQYA 312 Query: 291 ANEITILP--GKSITTTNFLFAGAKEFPTIHHYEKDL--AIPRFEMLIDWGWFYFIAKPM 346 AN +T+ P G+ +F + G ++ +++Y++D+ A+P + WG F I K Sbjct: 313 AN-MTLKPVNGELNYAMDFYY-GPTDYQILNNYDRDIDEAMP-----LGWGIFGVINK-- 363 Query: 347 FMLMSYFYNLVGNF--GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 ++++ +F L+ F GIAI+L T+ +KLL P+ KQY+S MK ++P+I+E+ EK+ Sbjct: 364 YLIIPFFNFLIAYFPAGIAIILLTISIKLLLSPVQYKQYLSQGKMKVLRPEINEINEKYA 423 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 +P + Q+ M +LY +PL+GC P LLQIPVF+A++ + +RH F W D Sbjct: 424 DNPMKKQQETM-KLYSKAGASPLSGCIPGLLQIPVFYALFTFFPSAFALRHKSFL-WADD 481 Query: 465 LAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSP--------PPADKG 515 L++ D LPF++P + HV ++PI+ S+++FI M M+ P Sbjct: 482 LSSYDK------IADLPFHIPFYGDHVSLFPILASIAIFIYMTMTTGQSMQQTQQPGMPN 535 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ P++ +F +++ +GL +Y+ SN+I+I VI Sbjct: 536 MKFLMYLSPIMMLFFFNNYASGLSLYYFISNLITIGIMLVI 576 >gi|261884151|ref|ZP_06008190.1| putative inner membrane protein translocase component YidC [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 146 Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 62/137 (45%), Positives = 100/137 (72%), Gaps = 1/137 (0%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +I++GWF FIAKPMF+L+S+ +N +GN+G AI+ T+ ++++ FPL K VS +K++ Sbjct: 4 VIEYGWFTFIAKPMFLLLSWLHNYIGNWGFAIVALTIVIRIVLFPLTYKGMVSMNKLKDL 63 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PK+ E++ K+K P + L +++LYK + NP+ GC PIL+QIP+FFAIY+V+ ++E Sbjct: 64 APKMKEIQAKYKGDPSK-LNAHVMELYKKNGANPMGGCLPILIQIPIFFAIYRVLLNAIE 122 Query: 453 MRHAPFWGWIKDLAAAD 469 ++ AP+ WIKDLA + Sbjct: 123 LKGAPWIFWIKDLAIME 139 >gi|147679254|ref|YP_001213469.1| preprotein translocase subunit YidC [Pelotomaculum thermopropionicum SI] gi|146275351|dbj|BAF61100.1| preprotein translocase subunit YidC [Pelotomaculum thermopropionicum SI] Length = 222 Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 81/227 (35%), Positives = 127/227 (55%), Gaps = 27/227 (11%) Query: 339 FYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F I M L+++ Y L + ++GIAI+L T+ VK++ +PL+ KQ S M+ IQ Sbjct: 4 FSSIVNGMTWLLNWLYQLTVAAGLPSYGIAIILLTIIVKMVLYPLSHKQMKSMLAMQQIQ 63 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--SISL 451 PK+ E++EK+K P+ +Q+A+++LY+ HN+NP AGC P+L+Q+P+ A+Y+ + + Sbjct: 64 PKVKEIQEKWKNKDPKKMQQAIMELYREHNVNPAAGCLPLLIQMPILIALYRSLFNFPYI 123 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 HA F W+ +L+ DP I PI+ ++ F+Q KM+ Sbjct: 124 NTAHAVFL-WVPNLSVKDPYYIL-------------------PILAGVTTFLQSKMTTTT 163 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +D Q M+L MPV + S PAGL +YW N+ IVQQ I K Sbjct: 164 SDPTQRMMLYTMPVFIAWIAGSVPAGLALYWVVFNIGGIVQQYFINK 210 >gi|298377600|ref|ZP_06987552.1| inner membrane protein OxaA [Bacteroides sp. 3_1_19] gi|298265619|gb|EFI07280.1| inner membrane protein OxaA [Bacteroides sp. 3_1_19] Length = 633 Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 98/347 (28%), Positives = 179/347 (51%), Gaps = 32/347 (9%) Query: 251 WLGISDKYWASVFIPSK---ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 W+G D ++++V I + T+ S K + +G Q K +A+ L GK T +F Sbjct: 266 WIGYKDMFFSTVLISQEGFEATTLDS--KAIPEGDVLKQFKTTASVPFDLQGKETTNLSF 323 Query: 308 LFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWF-------YFIAKPMFMLMSYFYNLV 357 F G +F + ++K ++ + E L+ GW YF+ P+F + F + Sbjct: 324 YF-GPNKFALLKSFDKGVSAEQQLDLEKLVPLGWGIFRWVNQYFVI-PLFDFLGKF---I 378 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMI 416 N+GI I+L T+ VK++ FPL K Y+S+A M+ ++P+++E+ K+ Q QKA + Sbjct: 379 HNYGILILLMTIIVKIILFPLTYKSYMSSAKMRVLRPQVEEINAKYPGQDKAMERQKATM 438 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY +P++GC P+LLQ+P+ A++ ++E+RH F W DL+ D IF+ Sbjct: 439 ELYSRAGASPMSGCLPMLLQMPILIALFMFFPSAIELRHQSFL-WAHDLSTYDA--IFSW 495 Query: 477 FGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSPPPADKGQAM------ILNWMPVVFVF 529 +P P F H+ ++ ++M+++ K + + GQ ++ MP++F+ Sbjct: 496 NKYIPIITPYFGNHISLFCLLMTITNIFYTKYNMEMTNTGQQQMPGMKAMMYMMPLMFLV 555 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + + +GL Y+ S +I+IV Q +I + E L+ +L + K Sbjct: 556 FFNQYASGLTYYYFISTLITIV-QTLIFRYTINEDKLLAKLEANKRK 601 >gi|255015211|ref|ZP_05287337.1| putative inner membrane protein translocase component YidC [Bacteroides sp. 2_1_7] Length = 633 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 98/347 (28%), Positives = 179/347 (51%), Gaps = 32/347 (9%) Query: 251 WLGISDKYWASVFIPSK---ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 W+G D ++++V I + T+ S K + +G Q K +A+ L GK T +F Sbjct: 266 WIGYKDMFFSTVLISQEGFEATTLDS--KAIPEGDVLKQFKTTASVPFDLQGKEATNLSF 323 Query: 308 LFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWF-------YFIAKPMFMLMSYFYNLV 357 F G +F + ++K ++ + E L+ GW YF+ P+F + F + Sbjct: 324 YF-GPNKFALLKSFDKGVSAEQQLDLEKLVPLGWGIFRWVNQYFVI-PLFDFLGKF---I 378 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMI 416 N+GI I+L T+ VK++ FPL K Y+S+A M+ ++P+++E+ K+ Q QKA + Sbjct: 379 HNYGILILLMTIIVKIILFPLTYKSYMSSAKMRVLRPQVEEINAKYPGQDKAMERQKATM 438 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY +P++GC P+LLQ+P+ A++ ++E+RH F W DL+ D IF+ Sbjct: 439 ELYSRAGASPMSGCLPMLLQMPILIALFMFFPSAIELRHQSFL-WAHDLSTYDA--IFSW 495 Query: 477 FGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSPPPADKGQAM------ILNWMPVVFVF 529 +P P F H+ ++ ++M+++ K + + GQ ++ MP++F+ Sbjct: 496 NKYIPIITPYFGNHISLFCLLMTITNIFYTKYNMEMTNTGQQQMPGMKAMMYMMPLMFLV 555 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + + +GL Y+ S +I+IV Q +I + E L+ +L + K Sbjct: 556 FFNQYASGLTYYYFISTLITIV-QTLIFRYTINEDKLLAKLEANKRK 601 >gi|225873712|ref|YP_002755171.1| membrane protein [Acidobacterium capsulatum ATCC 51196] gi|225792406|gb|ACO32496.1| membrane protein [Acidobacterium capsulatum ATCC 51196] Length = 605 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 117/445 (26%), Positives = 203/445 (45%), Gaps = 72/445 (16%) Query: 146 SGKILTPTTPIKLVFK-NANNILFERTISLDEHYLFKIVDTVTNNSIDQIR-------FS 197 +G I P T L F+ +AN + E+T ++ Y+ + VT N F Sbjct: 167 TGTIQAPAT---LTFRYSANGLTVEKTFRFEKSYVLETDVKVTRNGAPVTALLAWPSGFG 223 Query: 198 PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS---WLGI 254 + + +++ G + GF G V+Q IE +S + G+ Sbjct: 224 DQETLPQYQNAQIDQETGAKTGFHLAGGPN--VKQ----IEPKKVSGGDTVQGPLDYAGV 277 Query: 255 SDKYWASVFIPSKE-----TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT---- 305 SD Y+AS+F+P + H + D +K +++ +L +TT Sbjct: 278 SDLYFASIFLPPNPDNALMVTLHHALELPRDPAHPKTSKM--DQVPVLGAAVGSTTGEVH 335 Query: 306 NFLFAGAKEFP------TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL-VG 358 + LF G K T +H+ E ++ +G++ +IAKPMF+++ +F+N + Sbjct: 336 DRLFVGPKALDVLKSIHTAYHFN-------LEGIVHYGFWGWIAKPMFLVLQFFHNHGIP 388 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPP--QVLQK 413 N+G AI+L T+ + P + M IQP++D ++ K+ K + P Q + K Sbjct: 389 NWGWAILLLTLILNAAMMPTRVTMMKKSLAMMRIQPQMDAIKAKYAKYKATDPRKQEMNK 448 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M+ L K IN AGC P+LLQ P+ Y+++ +++ +RHA W W+ DL+A D Sbjct: 449 EMMDLQKREGINMFAGCLPMLLQYPLLIGFYRMLEVTIALRHA-HWMWLPDLSAPD---- 503 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNW-MPVVFVFAL 531 P+Y I PI + +SMF+ +P P D Q ++ + MP F F + Sbjct: 504 -------PYY--------ILPIFVVVSMFLVQFFTPSPGVDPAQQRMMAFMMPAFFGFMM 548 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 +G+ +YW+ N++ + QQ V+ Sbjct: 549 LHIGSGVALYWAGGNILGVGQQWVM 573 >gi|150007175|ref|YP_001301918.1| putative inner membrane protein translocase component YidC [Parabacteroides distasonis ATCC 8503] gi|166975877|sp|A6L9D2|OXAA_PARD8 RecName: Full=Inner membrane protein oxaA gi|149935599|gb|ABR42296.1| membrane protein, putative [Parabacteroides distasonis ATCC 8503] Length = 633 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 98/347 (28%), Positives = 179/347 (51%), Gaps = 32/347 (9%) Query: 251 WLGISDKYWASVFIPSK---ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 W+G D ++++V I + T+ S K + +G Q K +A+ L GK T +F Sbjct: 266 WIGYKDMFFSTVLISQEGFEATTLDS--KAIPEGDVLKQFKTTASVPFDLQGKEATNLSF 323 Query: 308 LFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWF-------YFIAKPMFMLMSYFYNLV 357 F G +F + ++K ++ + E L+ GW YF+ P+F + F + Sbjct: 324 YF-GPNKFALLKSFDKGVSAEQQLDLEKLVPLGWGIFRWVNQYFVI-PLFDFLGKF---I 378 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMI 416 N+GI I+L T+ VK++ FPL K Y+S+A M+ ++P+++E+ K+ Q QKA + Sbjct: 379 HNYGILILLMTIIVKIILFPLTYKSYMSSAKMRVLRPQVEEINAKYPGQDKAMERQKATM 438 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY +P++GC P+LLQ+P+ A++ ++E+RH F W DL+ D IF+ Sbjct: 439 ELYSRAGASPMSGCLPMLLQMPILIALFMFFPSAIELRHQSFL-WAHDLSTYDA--IFSW 495 Query: 477 FGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSPPPADKGQAM------ILNWMPVVFVF 529 +P P F H+ ++ ++M+++ K + + GQ ++ MP++F+ Sbjct: 496 NKYIPIITPYFGNHISLFCLLMTITNIFYTKYNMEMTNTGQQQMPGMKAMMYMMPLMFLV 555 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + + +GL Y+ S +I+IV Q +I + E L+ +L + K Sbjct: 556 FFNQYASGLTYYYFISTLITIV-QTLIFRYTINEDKLLAKLEANKRK 601 >gi|218960871|ref|YP_001740646.1| Preprotein translocase subunit YidC (modular protein) [Candidatus Cloacamonas acidaminovorans] gi|167729528|emb|CAO80439.1| Preprotein translocase subunit YidC (modular protein) [Candidatus Cloacamonas acidaminovorans] Length = 543 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 122/536 (22%), Positives = 226/536 (42%), Gaps = 62/536 (11%) Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 QTV +P + D ++D ++L N + + N +G + L + + Sbjct: 44 QTVTEPVKPDTIIITPMLDTLLAKGKTPEIIKLSNQLMTVTFNSRGGSIQQVELHNFIMH 103 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 S+ ++ +N+ A++ + E P + ++ +I + + Sbjct: 104 DSTKVKLIP-------ENSSLADVKLIHPT--AETPLKDVIFQY---RISPDSLGVTFFL 151 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTN-NSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N ++ +LD Y V N I+ I I T T T Q+ Sbjct: 152 GDETNSQISKSFALDNQYGISFSINVENYQVINGIEVDFSCGI----ADTETVTKSKQQD 207 Query: 220 F-IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI---PSKETSFHSQF 275 + D + + + ++K S S +W+ + KY+ V P+ SF ++ Sbjct: 208 YRFMYYADNEIFKTTLAKMKKKQPSGNLNSFNWMALRGKYFTLVLKENEPALVRSFRTEL 267 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA-IPRFEMLI 334 + A F + P +S + + ++AG ++ + Y K + IP Sbjct: 268 NPQTGNPA-----FVIDSKQSNPKQSWSQSFIIYAGPTDYQILQKYGKQMDNIPERGA-- 320 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++A ++ + + + N+G+ I++ V +KLL PL + Q V + + +QP Sbjct: 321 --SWLRWLANIFEWILKFLHRYIKNYGVVILIFAVIIKLLLHPLTQHQMVHSMRQQKMQP 378 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 I+E+R+K+ + ++ + +LYK + + AGC P+L+QIP+ +Y V+ SL+MR Sbjct: 379 YIEEIRKKYANDVVKQ-REELTKLYKENKTSMTAGCLPLLIQIPILIPLYNVLRYSLDMR 437 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 +A F W+KDL+ DP + ILP + GFM + + M P D Sbjct: 438 NASFCLWLKDLSEPDP------YMILPIIMGGFM------------LLQSLMMRPKNVDT 479 Query: 515 GQ-----------AMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ W MP+ V PAGL++YW+ NV+SI+ Q + K Sbjct: 480 SQMTEQQKMQQSQMKIMTWGMPIFMVIIFRGMPAGLVLYWTAFNVLSILHQYFLTK 535 >gi|196229389|ref|ZP_03128254.1| 60 kDa inner membrane insertion protein [Chthoniobacter flavus Ellin428] gi|196226621|gb|EDY21126.1| 60 kDa inner membrane insertion protein [Chthoniobacter flavus Ellin428] Length = 552 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/353 (28%), Positives = 179/353 (50%), Gaps = 54/353 (15%) Query: 238 EKSSISNFHESNSWLGISDKYWASVFIP----------SKETS---FHSQFK-------- 276 E + + HE W ++D+Y+ ++ P SKE + ++F+ Sbjct: 197 EHGTYTATHEGIPWAAVADQYFTTIVTPQVDSENKDTPSKERGNSVWATRFQISDDVWKA 256 Query: 277 --YLSDGH--ARY--QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + +DG ARY + T+ PG+ ++ G +E+ + K + + Sbjct: 257 TSHDADGSSSARYGIEGALGMPGFTLAPGQMQVQIFHIYTGPREYGRL----KTMPDGQV 312 Query: 331 EMLI--DWGWFY--------FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 E+L D+G + F +K + ++ + VG++ IAI++ T+ +K + +P+ Sbjct: 313 EVLAFSDFGGIFSFLGPFVGFFSKVLLYSLNSLHAWVGSYAIAIIIITLLIKAILWPMQN 372 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 K + M+ + PK+ E+REKF Q PQ + +++LYK + +NPLAGCWP +Q+P+F Sbjct: 373 KATKAAKRMQALSPKMTEVREKF-QDDPQKMNAEVMKLYKEYGVNPLAGCWPAFIQMPIF 431 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSL 499 F Y ++ ++E+R+A F W++DL+ D F+LPG V I PI M+ Sbjct: 432 FGFYNMLGKAVELRNAKFL-WVQDLSQPDTV----------FHLPGLDFPVNILPIFMAA 480 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +M QMK SP D Q I+ MP++FV ++ + L +Y + +N++S+VQ Sbjct: 481 TMVWQMKASPKTGDPQQQKIMMIMPLIFVLFCYNYASALALYLTVNNLVSVVQ 533 >gi|325285135|ref|YP_004260925.1| Membrane protein oxaA [Cellulophaga lytica DSM 7489] gi|324320589|gb|ADY28054.1| Membrane protein oxaA [Cellulophaga lytica DSM 7489] Length = 615 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 97/321 (30%), Positives = 164/321 (51%), Gaps = 25/321 (7%) Query: 251 WLGISDKYWASVFIPSK--ETSFHSQFKYLSDGHARYQAKFSANEITILPGKS----ITT 304 WL +++S+ K ET+ S + D + KF+ +LP K+ ++ Sbjct: 264 WLSYRQHFFSSILATDKHFETAKLSSVNLVEDDTP--ETKFTKENTAVLPLKADAGELSY 321 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 L+ G + + Y K+L + + WG F FI + +F F + +GIAI Sbjct: 322 NMNLYYGPTDIKELSKY-KELGLED-SIPYGWGIFGFINRYVFTPAYTFLSSFLPYGIAI 379 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 ++ T+ V+LL P+ K Y+S A MK ++P+I EL EK+K +P + Q+ M +LY Sbjct: 380 IVMTILVRLLMSPVTYKSYLSQAKMKVLKPEIAELGEKYKDNPMKKQQETM-KLYNKAGA 438 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 +P++GC P LLQ+PVF+A++ S +R PF W DL++ D + LPF++ Sbjct: 439 SPMSGCLPALLQLPVFYALFMFFPTSFALRQKPFL-WADDLSSYD------IIAELPFHI 491 Query: 485 PGFM-HVGIWPIIMSLSMFIQMKMSP------PPADKGQAMILNWMPVVFVFALSSFPAG 537 P + HV ++PI+ S+++F M M+ P IL P++ + +S+ +G Sbjct: 492 PLYGDHVSLFPILASIAIFFYMMMTSGQNMQQQPGMPNMKFILYLSPLMMLIFFNSYASG 551 Query: 538 LIIYWSWSNVISIVQQAVIMK 558 L +Y+ SN+I+I I K Sbjct: 552 LSLYYFVSNLITIFIMLAIKK 572 >gi|297621235|ref|YP_003709372.1| inner membrane protein translocase component YidC [Waddlia chondrophila WSU 86-1044] gi|297376536|gb|ADI38366.1| inner membrane protein translocase component YidC [Waddlia chondrophila WSU 86-1044] Length = 822 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 95/307 (30%), Positives = 161/307 (52%), Gaps = 35/307 (11%) Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSIT-TTNF-LFAGA---KEFPTIHHYEKDLAI 327 S+ + + + R+QA + +LP S T NF +FAG K T+ H + Sbjct: 496 SRLVLVGEEYDRFQASKLPGYLMMLPLNSKGGTMNFRIFAGPFGDKTLTTVDHLYSN--- 552 Query: 328 PRFEMLIDW-------GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 P D+ GWF FI+ P +F+LM +F++L G++GI+I+L T+ ++++ + Sbjct: 553 PETGYNPDYKGSQTFHGWFSFISAPFSKFLFVLMKFFHHLTGSWGISIILLTIALRVMLY 612 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 PL S M+ +QP++ ++EK K+ P + Q + LY + +NP++GC+P+L+Q Sbjct: 613 PLNAWSTKSMLKMQQLQPEVQAIQEKHKKDPKKA-QLEVTNLYMSRGVNPISGCFPMLIQ 671 Query: 437 IPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 +P ++ ++ + E+R APF GWI +LAA D + + F++ H + PI Sbjct: 672 LPFLIGMFDLLKSTFELRGAPFIPGWIDNLAAPD---VLFSWKTPIFFIGNQFH--LLPI 726 Query: 496 IMSLSMFIQMK-MSPPPAD--------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 ++ + MFIQ + MS P D + Q + M VF FP+GL IYW S Sbjct: 727 LLGVVMFIQQRTMSNAPKDPNLMTEQQRQQRTMGTMMTAVFSVMFYHFPSGLNIYWLSSM 786 Query: 547 VISIVQQ 553 ++ I+QQ Sbjct: 787 LLGILQQ 793 >gi|189501466|ref|YP_001960936.1| 60 kDa inner membrane insertion protein [Chlorobium phaeobacteroides BS1] gi|254772768|sp|B3EQF7|OXAA_CHLPB RecName: Full=Inner membrane protein oxaA gi|189496907|gb|ACE05455.1| 60 kDa inner membrane insertion protein [Chlorobium phaeobacteroides BS1] Length = 587 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 106/349 (30%), Positives = 174/349 (49%), Gaps = 33/349 (9%) Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 SL++ SD K W+ + KY+ + IPS T YL G + Sbjct: 235 SLLKLDASDPSKEYREEQSGVAGWIAVRSKYFVASLIPSSPT----DGVYLK-GSGKPGE 289 Query: 288 KFSANEITI---LPG--KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY-- 340 KF + LP K+ + + LF G ++ +H +L E ++D+GW + Sbjct: 290 KFEDYTAALKFTLPQNEKTHSESLVLFVGPVDYNVLHSLNVNL-----EKIMDFGWDWLT 344 Query: 341 -----FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +I P+F L+S L N+G+ I++ + +KL+ +PL S M +QP Sbjct: 345 RPFAEYIILPIFDLLS---KLTSNYGLIIIIFALLIKLVTYPLTMASTKSMKKMAALQPM 401 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + EL+EK+K +P Q +Q + ++YK +NPL GC P+LLQ+P+ FA++ V S+E+R Sbjct: 402 MKELQEKYKDNP-QKMQSELGRIYKEAGVNPLGGCLPVLLQMPLLFAMFYVFRSSIELRQ 460 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 F W KDL+ P +I L +P Y H+ ++PI+M ++++Q K++P Sbjct: 461 QSFL-WAKDLSL--PDSILDLGFSIPLYGD---HIALFPILMGGAVYLQQKITPTAQSND 514 Query: 516 Q-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q +L PV+ + ++ PAGL +Y+ NV SI Q I K A+ Sbjct: 515 QMKAMLYIFPVMMLLFFNNLPAGLGLYYLMFNVFSIAQTFYINKTSSAD 563 >gi|332296677|ref|YP_004438599.1| Membrane protein oxaA [Treponema brennaborense DSM 12168] gi|332179780|gb|AEE15468.1| Membrane protein oxaA [Treponema brennaborense DSM 12168] Length = 603 Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 114/429 (26%), Positives = 206/429 (48%), Gaps = 43/429 (10%) Query: 164 NNILFERTISLD-EHYLFKI-VDTVTNNSIDQIRFSPRGRIMRHKPQ-----TATNTFGV 216 ++ +F + + D Y+F++ V ++++ + F +R PQ + N Sbjct: 174 SSFVFAKQYTFDPAGYMFRLDVSIDGDDTLKGLAFGNSAYTIRTSPQIGPYFDSKNNRYE 233 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-----SKETSF 271 F++ G K +K + + + + +W G+S KY+ + +P ++ ++ Sbjct: 234 NRTFMSYNGSK----KKKTTLGSGQSKVYDDGYTWTGVSGKYFEILGVPLNPTVMQDVTY 289 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL------ 325 + + D +A Q S IT + T + + G K T+ Y Sbjct: 290 SAALEV--DNYANAQVMMSRGPITQSDAQD---TYYFYVGPKTEETLKIYNNAAENVWHL 344 Query: 326 -AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 + E L G +++ + M Y ++ N+G++I++ T+ +KL+ FPL KK + Sbjct: 345 SGLKLNESLESSGILFWLETFLKWCMELLYKIIPNWGVSIIILTILLKLVLFPLTKKSSL 404 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 ST M+ +QPK+ E++ KFK P + + M +LYK NPL+GC P+L+Q P+ FA+Y Sbjct: 405 STLKMQELQPKMQEIQAKFKDQPDK-MNAEMAKLYKETGYNPLSGCLPLLIQFPLIFAMY 463 Query: 445 KVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + + E R A F GWI DL+ D +++ L LPF + + PII +S + Sbjct: 464 NLFNNYFEFRGAMFIPGWIPDLSVGD--SVYALNFNLPFLGN---QLRLLPIIYVISQLL 518 Query: 504 QMKMSPPPADKGQA-----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-- 556 K++ G + +++ MP+ F F + P+GL+IYW+ SN + +VQQ ++ Sbjct: 519 FGKVTQSGTAAGASGMQMKIMMYGMPLFFFFIFYNAPSGLLIYWTVSNALQLVQQVILNK 578 Query: 557 -MKMHGAEI 564 MK AEI Sbjct: 579 TMKAKRAEI 587 >gi|228995394|ref|ZP_04155066.1| Membrane protein oxaA 1 [Bacillus mycoides Rock3-17] gi|229003008|ref|ZP_04160867.1| Membrane protein oxaA 1 [Bacillus mycoides Rock1-4] gi|228758236|gb|EEM07422.1| Membrane protein oxaA 1 [Bacillus mycoides Rock1-4] gi|228764347|gb|EEM13222.1| Membrane protein oxaA 1 [Bacillus mycoides Rock3-17] Length = 246 Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 89/236 (37%), Positives = 133/236 (56%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLYKTH +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 AKLKEKYSSKDQATQQKLQQEMMQLYKTHGVNPLAGCLPIFIQMPILFAFYHAIMRTAEI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W DL AD P+Y I PI+ +++ FIQ K++ Sbjct: 147 KQHSFL-WF-DLGHAD-----------PYY--------ILPIVAAITTFIQQKLA-MAGT 184 Query: 514 KGQ----AMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM++ MP+ + VFA+ +FPA L +YW N+ I Q +I G EI Sbjct: 185 AGQNPQMAMMIWLMPIMILVFAI-NFPAALSLYWVVGNIFGIAQMYMI---KGPEI 236 >gi|145220572|ref|YP_001131281.1| protein translocase subunit yidC [Prosthecochloris vibrioformis DSM 265] gi|189036356|sp|A4SH20|OXAA_PROVI RecName: Full=Inner membrane protein oxaA gi|145206736|gb|ABP37779.1| protein translocase subunit yidC [Chlorobium phaeovibrioides DSM 265] Length = 580 Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 88/316 (27%), Positives = 165/316 (52%), Gaps = 33/316 (10%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI-----LPGKSITTT 305 W+ + +KY+ + IP+ T + DG + +F ++ + G S+ + Sbjct: 253 WVAVRNKYFVAALIPAGPTG-----GFYLDGSKKAGNEFENYLASLKMEVPVSGASLDNS 307 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY-------FIAKPMFMLMSYFYNLVG 358 L+ G ++ + + +L E ++D+GW + +I P+F M+ F + Sbjct: 308 FSLYMGPLDYDIVRAQKAEL-----EKIMDFGWDWLTRPFAEYIILPVFSWMNKF---IH 359 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+ I++ +KL+ +PL+ S M +QP + EL++K+K +P + LQ + ++ Sbjct: 360 NYGLIIIIFAFLIKLVTYPLSLASTKSMKKMAALQPMLKELQDKYKDNPAK-LQSELGRI 418 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NPL GC P++LQ+P+ FA++ V S+E+R F W DL+ P +I L Sbjct: 419 YKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIELRQHGFL-WAHDLSV--PDSILNLGF 475 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAG 537 +P Y H+ + PI+M+ ++F+Q K++P Q I+ +M P + + ++ P+G Sbjct: 476 TIPMYGD---HIALMPILMAGTVFVQQKITPTAQTNDQMKIMLYMFPAMMLLFFNNMPSG 532 Query: 538 LIIYWSWSNVISIVQQ 553 L +Y+ NV S+ QQ Sbjct: 533 LGLYYLMFNVFSVAQQ 548 >gi|258517431|ref|YP_003193653.1| 60 kDa inner membrane insertion protein [Desulfotomaculum acetoxidans DSM 771] gi|257781136|gb|ACV65030.1| 60 kDa inner membrane insertion protein [Desulfotomaculum acetoxidans DSM 771] Length = 223 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 122/215 (56%), Gaps = 24/215 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQVLQKAMIQ 417 N+G+AI+L TV +K+L +PL KKQ +S +M+ +QPKI EL+ K+K + Q++Q+ ++ Sbjct: 29 NYGLAIILLTVIIKMLLYPLTKKQMLSMRSMQQLQPKIKELQNKYKGKDQQQIMQQKTME 88 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVIS--ISLEMRHAPFWGWIKDLAAADPTNIFT 475 LYK HNINP+AGC P+L+Q+P+ A+Y+ + L HA F W+ +L+ DP I Sbjct: 89 LYKEHNINPMAGCLPLLIQMPILIALYRALYNFKYLNTAHANFL-WVPNLSNVDPWVIL- 146 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 PI+ S ++Q K++ +D Q ++L MP+ + P Sbjct: 147 ------------------PILAGASTYLQSKLTTTTSDPTQQIMLYTMPLFIGYISYKMP 188 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH-GAEIGLIDR 569 AGL +YW N++ +QQ I K G E G++ + Sbjct: 189 AGLALYWVVFNLVGAIQQYYINKHDVGLEGGVVGK 223 >gi|256840550|ref|ZP_05546058.1| inner membrane protein oxaA [Parabacteroides sp. D13] gi|262381171|ref|ZP_06074309.1| inner membrane protein oxaA [Bacteroides sp. 2_1_33B] gi|256737822|gb|EEU51148.1| inner membrane protein oxaA [Parabacteroides sp. D13] gi|262296348|gb|EEY84278.1| inner membrane protein oxaA [Bacteroides sp. 2_1_33B] Length = 633 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 97/347 (27%), Positives = 177/347 (51%), Gaps = 32/347 (9%) Query: 251 WLGISDKYWASVFIPSK---ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 W+G D ++++V I + T+ S K + +G Q K + + L GK T +F Sbjct: 266 WIGYKDMFFSTVLISQEGFEATTLDS--KAIPEGDVLKQFKTTTSVPFDLQGKEATNLSF 323 Query: 308 LFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWF-------YFIAKPMFMLMSYFYNLV 357 F G +F + ++K + + E L+ GW YF+ P+F + F + Sbjct: 324 YF-GPNKFALLKSFDKGVVAEQQLDLEKLVPLGWGIFRWVNQYFVI-PLFDFLGKF---I 378 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMI 416 N+GI I+L T+ VK++ FPL K Y+S+A M+ ++P+++E+ K+ Q QKA + Sbjct: 379 HNYGILILLMTIIVKIILFPLTYKSYMSSAKMRVLRPQVEEINAKYPGQDKAMERQKATM 438 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY +P++GC P+LLQ+P+ A++ ++E+RH F W DL+ D IF+ Sbjct: 439 ELYSRAGASPMSGCLPMLLQMPILIALFMFFPSAIELRHQSFL-WAHDLSTYDA--IFSW 495 Query: 477 FGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSPPPADKGQAM------ILNWMPVVFVF 529 +P P F H+ ++ ++M+++ K + + GQ ++ MP++F+ Sbjct: 496 NKYIPIITPYFGNHISLFCLLMTITNIFYTKYNMEMTNTGQQQMPGMKAMMYMMPLMFLV 555 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + + +GL Y+ S +I+IV Q +I + E L+ +L + K Sbjct: 556 FFNQYASGLTYYYFISTLITIV-QTLIFRYTINEDKLLAKLEANKRK 601 >gi|228994205|ref|ZP_04154105.1| Membrane protein oxaA 1 [Bacillus pseudomycoides DSM 12442] gi|228765657|gb|EEM14311.1| Membrane protein oxaA 1 [Bacillus pseudomycoides DSM 12442] Length = 246 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 89/236 (37%), Positives = 133/236 (56%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQVLQPEM 86 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLYKTH +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 AKLKEKYSSKDQATQQKLQQEMMQLYKTHGVNPLAGCLPIFIQMPILFAFYHAIMRTAEI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W DL AD P+Y I PI+ +++ FIQ K++ Sbjct: 147 KQHSFL-WF-DLGHAD-----------PYY--------ILPIVAAITTFIQQKLA-MAGT 184 Query: 514 KGQ----AMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM++ MP+ + VFA+ +FPA L +YW N+ I Q +I G EI Sbjct: 185 AGQNPQMAMMIWLMPIMILVFAI-NFPAALSLYWVVGNIFGIAQMYMI---KGPEI 236 >gi|126661858|ref|ZP_01732857.1| putative inner membrane protein translocase component YidC [Flavobacteria bacterium BAL38] gi|126625237|gb|EAZ95926.1| putative inner membrane protein translocase component YidC [Flavobacteria bacterium BAL38] Length = 628 Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 153/257 (59%), Gaps = 26/257 (10%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLT 367 + G ++ ++ YE++L M + WG F +I + +F+ + F + +G FGIAI+L Sbjct: 329 YYGPAKYEILNGYERNLDEI---MPLGWGIFGWINRYIFIPVFGFISGLGIGFGIAIVLF 385 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 T+ V+++ P+ K Y+S A MK ++P+I EL EKFK +P + Q+ M +LY +NP+ Sbjct: 386 TILVRIVMSPVTYKSYLSQAKMKVLRPEIAELNEKFKDNPMKKQQETM-KLYSKAGVNPM 444 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 AGC P ++Q+P+F+A+++ ++R F W DL++ D +I+ LPF++P + Sbjct: 445 AGCLPAVMQMPIFYALFQFFPSMFDLRQKSFL-WADDLSSYD--SIYQ----LPFHIPFY 497 Query: 488 -MHVGIWPIIMSLSMFIQMK-------MSPPPA----DKGQAM--ILNWMPVVFVFALSS 533 HV ++PI+ S+++F MK MS PP D G+ M ++ P++ +F ++ Sbjct: 498 GSHVSLFPILASIAIFFYMKMTTGDQAMSTPPQEGMPDMGKIMKIMIYISPLMMLFFFNN 557 Query: 534 FPAGLIIYWSWSNVISI 550 + +GL +Y+ SN+I+I Sbjct: 558 YASGLSLYYFISNLITI 574 >gi|42527897|ref|NP_972995.1| putative inner membrane protein translocase component YidC [Treponema denticola ATCC 35405] gi|81700132|sp|Q73JM1|OXAA_TREDE RecName: Full=Inner membrane protein oxaA gi|41818942|gb|AAS12914.1| inner membrane protein [Treponema denticola ATCC 35405] Length = 582 Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 93/323 (28%), Positives = 173/323 (53%), Gaps = 22/323 (6%) Query: 250 SWLGISDKYWASVFIPSK--ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 SW+ +S KY++ + IP + F S K +G + ++F + I+ G + Sbjct: 264 SWVSVSGKYFSFIIIPKDPIQKMFFSGIK--EEGAKLHNSQFFISRQPIV-GNAAYDQYR 320 Query: 308 LFAGAKEFPTIHHYEKDLAIP------RFEMLI-DWGWFYFIAKPMFMLMSYFYNLVGNF 360 ++ G ++ Y A R + L G+ + + + +M FY ++ N+ Sbjct: 321 VYIGPSSEKILNSYNSAAANNYGYENLRIDSLAASSGFLAPLERVLKFVMEIFYKIIPNW 380 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+A++L T+ ++++FFPL KK +T M+ +QP+I+EL++K+K + PQ L M++ YK Sbjct: 381 GVALLLLTLLMRIIFFPLTKKSSEATKRMQELQPQINELQQKYKNN-PQKLNAEMVKFYK 439 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGI 479 NP +GC P+L+Q+P FA++ + + E R A F GWI DL+ D +I Sbjct: 440 EAGYNPASGCLPLLIQLPFLFAMFGLFNNYFEFRGASFIPGWIPDLSVGD--SILKFGFT 497 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFP 535 +PF + + + PII + S + K++ P Q +++ +MP+ F F + P Sbjct: 498 IPFL--NWTDLRLLPIIYTASQLLHGKLTQTPGQSQQNPSMKIMIYFMPLFFFFLFYNAP 555 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 +GL+++W++SN++ ++QQ +I K Sbjct: 556 SGLLLFWTFSNILMLLQQLIINK 578 >gi|325474885|gb|EGC78071.1| inner membrane protein oxaA [Treponema denticola F0402] Length = 582 Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 93/323 (28%), Positives = 173/323 (53%), Gaps = 22/323 (6%) Query: 250 SWLGISDKYWASVFIPSK--ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 SW+ +S KY++ + IP + F S K +G + ++F + I+ G + Sbjct: 264 SWVSVSGKYFSFIIIPKDPIQKMFFSGIK--EEGAKLHNSQFFISRQPIV-GNAAYDQYR 320 Query: 308 LFAGAKEFPTIHHYEKDLAIP------RFEMLI-DWGWFYFIAKPMFMLMSYFYNLVGNF 360 ++ G ++ Y A R + L G+ + + + +M FY ++ N+ Sbjct: 321 VYIGPSSEKILNSYNSAAANNYGYENLRIDSLAASSGFLAPLERVLKFVMEIFYKIIPNW 380 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+A++L T+ ++++FFPL KK +T M+ +QP+I+EL++K+K + PQ L M++ YK Sbjct: 381 GVALLLLTLLMRIIFFPLTKKSSEATKRMQELQPQINELQQKYKNN-PQKLNAEMVKFYK 439 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGI 479 NP +GC P+L+Q+P FA++ + + E R A F GWI DL+ D +I Sbjct: 440 EAGYNPASGCLPLLIQLPFLFAMFGLFNNYFEFRGASFIPGWIPDLSVGD--SILKFGFT 497 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFP 535 +PF + + + PII + S + K++ P Q +++ +MP+ F F + P Sbjct: 498 IPFL--NWTDLRLLPIIYTASQLLHGKLTQTPGQSQQNPSMKIMIYFMPLFFFFLFYNAP 555 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 +GL+++W++SN++ ++QQ +I K Sbjct: 556 SGLLLFWTFSNILMLLQQLIINK 578 >gi|282890627|ref|ZP_06299150.1| hypothetical protein pah_c022o237 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499624|gb|EFB41920.1| hypothetical protein pah_c022o237 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 840 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/324 (29%), Positives = 167/324 (51%), Gaps = 36/324 (11%) Query: 253 GISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI--TTTNFLFA 310 G+ + + V +PS+ T L R++A+ +T+LP KS T T +FA Sbjct: 504 GLRVDHVSGVEVPSRLT-------ILGQKTDRFKAQDLPGYVTLLPLKSSGGTATFRMFA 556 Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDW-------GWFYFIAKP----MFMLMSYFYNLVGN 359 G + + + P D+ GWF FI++P +F+LM +F+++ G+ Sbjct: 557 GPFASNVLKTVDATFSNPETGYNPDYIACQSFHGWFSFISEPFAKFLFILMQFFHSVTGS 616 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + +I+L TV ++++ +PL S M+ I P++ ++E+ K+ P + Q ++ LY Sbjct: 617 WAFSIILLTVALRVMLYPLNAWSTKSMLRMQQIAPEVKAIQERHKKDPKKA-QLEIMNLY 675 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFG 478 K +NP++GC P+L+Q+P ++ ++ + E+R A F GWI +L A P +F+ Sbjct: 676 KERGVNPVSGCLPLLIQMPFLIGMFDLLKSTFELRGASFIPGWIDNLTA--PDVLFSWQT 733 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPAD--------KGQAMILNWMPVVFVF 529 LPF F + PI++ + M++Q + MS P D + Q ++ N M VVF Sbjct: 734 PLPFIGNQFH---LLPILLGVVMWLQQRFMSAAPKDANQMTEQERQQRVMGNMMAVVFTV 790 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQ 553 FP+GL IYW S ++ ++QQ Sbjct: 791 MFYQFPSGLNIYWLSSMLLGMLQQ 814 >gi|327540380|gb|EGF26966.1| 60 kDa inner membrane insertion protein [Rhodopirellula baltica WH47] Length = 822 Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 89/277 (32%), Positives = 145/277 (52%), Gaps = 26/277 (9%) Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG S+ + LFAG K+ + Y I +GWF F+AKP+ L+ F N Sbjct: 476 VPPGSSLKQSLRLFAGPKQPDVMEAYG-------LGDCIYYGWFSFVAKPLGGLLHLFSN 528 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+ +AI+L T+ V+ L FPL++K ++ M+ + P++ ++ EK K + +A Sbjct: 529 -VGNYALAIVLLTLCVRGLMFPLSRKAAINAQRMQELAPELKKIAEKHKDDM-EARVRAQ 586 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF--W-GWIKDLAAADPTN 472 +L + NP+AGC P+ LQ+P+F +Y+ +S+ +E+R A F W W +LAA D Sbjct: 587 RELQQRVGFNPMAGCAPMFLQLPIFIGLYRTLSVDIELRQAAFASWTAWASNLAAPD--- 643 Query: 473 IFTLFGILPFYLPGFMHVG-------IWPIIMSLSMFIQMKMSPPPA-DKGQAM---ILN 521 + +G + G G I P+I+ Q KM PPA D+ AM ++N Sbjct: 644 MMYYWGDWMWDYLGGRGTGWLGPYFNILPMIVVSLFLAQQKMFMPPATDEQTAMTQKMMN 703 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +M +V PAGL IY+ S++ I ++ ++ K Sbjct: 704 YMTLVMGLFFFRVPAGLCIYFITSSLWGIGERILVKK 740 >gi|116329466|ref|YP_799186.1| preprotein translocase, YidC subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329930|ref|YP_799648.1| preprotein translocase, YidC subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122282297|sp|Q04W30|OXAA_LEPBJ RecName: Full=Inner membrane protein oxaA gi|122282754|sp|Q04XE2|OXAA_LEPBL RecName: Full=Inner membrane protein oxaA gi|116122210|gb|ABJ80253.1| Preprotein translocase, YidC subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123619|gb|ABJ74890.1| Preprotein translocase, YidC subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 622 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 124/207 (59%), Gaps = 5/207 (2%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + N+G +I++ + KL+F+PL +KQ S M+ + P++ + EKF P QK M Sbjct: 415 IPNYGWSIIIFAILFKLVFYPLNQKQAESMKKMQELSPQLKTINEKFANDPKMRQQKTM- 473 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK +N+NP+ GC P+++QIP+F A+Y S ++++ ++PF W+KDL ++P I+T Sbjct: 474 ELYKKNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSPFL-WVKDL--SEPDVIWTS 530 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 I P++ + + + ++M + Q +M+ D Q M++ MPV+ ++ + P+ Sbjct: 531 PAI-PYFTQTGIGLNLLALLMVGTQIFQTRMTSVSMDPNQKMLMYVMPVMMLYIFWNMPS 589 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 G+ +YW++ NV+SI QQ V + E Sbjct: 590 GVTLYWTFQNVLSIGQQWVTNHLKKTE 616 >gi|301311160|ref|ZP_07217088.1| inner membrane protein OxaA [Bacteroides sp. 20_3] gi|300830734|gb|EFK61376.1| inner membrane protein OxaA [Bacteroides sp. 20_3] Length = 633 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 96/347 (27%), Positives = 176/347 (50%), Gaps = 32/347 (9%) Query: 251 WLGISDKYWASVFIPSK---ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 W+G D ++++V I + T+ S K + +G Q K + + L GK T + Sbjct: 266 WIGYKDMFFSTVLISQEGFEATTLDS--KAIPEGDVLKQFKTTTSVPFDLQGKEATNLSL 323 Query: 308 LFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWF-------YFIAKPMFMLMSYFYNLV 357 F G +F + ++K + + E L+ GW YF+ P+F + F + Sbjct: 324 YF-GPNKFALLKSFDKGVVAEQQLDLEKLVPLGWGIFRWVNQYFVI-PLFDFLGKF---I 378 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMI 416 N+GI I+L T+ VK++ FPL K Y+S+A M+ ++P+++E+ K+ Q QKA + Sbjct: 379 HNYGILILLMTIIVKIILFPLTYKSYMSSAKMRVLRPQVEEINAKYPGQDKAMERQKATM 438 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY +P++GC P+LLQ+P+ A++ ++E+RH F W DL+ D IF+ Sbjct: 439 ELYSRAGASPMSGCLPMLLQMPILIALFMFFPSAIELRHQSFL-WAHDLSTYDA--IFSW 495 Query: 477 FGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSPPPADKGQAM------ILNWMPVVFVF 529 +P P F H+ ++ ++M+++ K + + GQ ++ MP++F+ Sbjct: 496 NKYIPIITPYFGNHISLFCLLMTITNIFYTKYNMEMTNTGQQQMPGMKAMMYMMPLMFLV 555 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + + +GL Y+ S +I+IV Q +I + E L+ +L + K Sbjct: 556 FFNQYASGLTYYYFISTLITIV-QTLIFRYTINEDKLLAKLEANKRK 601 >gi|32475265|ref|NP_868259.1| 60 kDa inner-membrane protein homolog- part of a protein secretion system [Rhodopirellula baltica SH 1] gi|38502913|sp|Q7UFZ2|OXAA_RHOBA RecName: Full=Inner membrane protein oxaA gi|32445806|emb|CAD78537.1| 60 kDa inner-membrane protein homolog-putative part of a protein secretion system [Rhodopirellula baltica SH 1] Length = 827 Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 88/277 (31%), Positives = 144/277 (51%), Gaps = 26/277 (9%) Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG S+ + LFAG K+ + Y I +GWF F+AKP+ L+ F N Sbjct: 481 VPPGSSLKQSLRLFAGPKQPDVMEAYG-------LGDCIYYGWFSFVAKPLGGLLHLFSN 533 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+ +AI+L T+ V+ L FPL++K ++ M+ + P++ ++ EK K + +A Sbjct: 534 -VGNYALAIVLLTLCVRGLMFPLSRKAAINAQRMQELAPELKKIAEKHKDDM-EARVRAQ 591 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI---KDLAAADPTN 472 +L + NP+AGC P+ LQ+P+F +Y+ +S+ +E+R A F W +LAA D Sbjct: 592 RELQQRVGFNPMAGCAPMFLQLPIFIGLYRTLSVDIELRQAAFASWTTWASNLAAPD--- 648 Query: 473 IFTLFGILPFYLPGFMHVG-------IWPIIMSLSMFIQMKMSPPPA-DKGQAM---ILN 521 + +G + G G I P+I+ Q KM PPA D+ AM ++N Sbjct: 649 MMYYWGDWMWDYLGGRGTGWLGPYFNILPMIVVSLFLAQQKMFMPPATDEQTAMTQKMMN 708 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +M +V PAGL IY+ S++ I ++ ++ K Sbjct: 709 YMTLVMGLFFFRVPAGLCIYFITSSLWGIGERILVKK 745 >gi|217033106|ref|ZP_03438570.1| hypothetical protein HPB128_27g13 [Helicobacter pylori B128] gi|216945179|gb|EEC23870.1| hypothetical protein HPB128_27g13 [Helicobacter pylori B128] Length = 173 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/177 (39%), Positives = 107/177 (60%), Gaps = 21/177 (11%) Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 VS +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAI Sbjct: 2 VSMQKLKELAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAI 60 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y+V+ ++E++ + + WI DL+ DP I P++M SM+ Sbjct: 61 YRVLYNAVELKSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYW 101 Query: 504 QMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++P D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 102 HQSVTPNTMTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKI 158 >gi|295134749|ref|YP_003585425.1| inner hypothetical protein translocase component YidC [Zunongwangia profunda SM-A87] gi|294982764|gb|ADF53229.1| putative inner membrane protein translocase component YidC [Zunongwangia profunda SM-A87] Length = 621 Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 90/340 (26%), Positives = 178/340 (52%), Gaps = 41/340 (12%) Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFI---PSKETSFHSQFKYLSDGH--ARYQA 287 KY D+ + S++ +++S+ + P K + SQ + D Y Sbjct: 248 KYDDLGHGEDEETEKDVSYIAYKQHFFSSILLTDTPFKTSKLTSQ-NLVEDEEIDTVYTK 306 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAKP 345 F+AN L + + G ++ + Y+++L +P + WG F +I K Sbjct: 307 AFTANIPLELQAGELNYNMNWYYGPTDYKILKDYDRNLDEIVP-----LGWGIFGWINKY 361 Query: 346 MFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F+ ++ +++ ++GIAI++ T+ V+++ P+ K Y+S A MK ++P+I+E+ EK+K Sbjct: 362 VFIPFFAFLSSVLPSYGIAIIVMTIVVRIVLSPVTYKSYLSQAKMKVLRPEINEINEKYK 421 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 + + Q+ M +LY +P++GC P L+QIP+F+A+++ + ++R F W D Sbjct: 422 DNAMKKQQETM-KLYSKAGASPMSGCLPALMQIPIFYALFQFFPSAFQLRQKSFL-WADD 479 Query: 465 LAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 L++ D + LPF++P + HV ++PI+ S+++FI M+M+ GQ+M N Sbjct: 480 LSSYD------VIAELPFHIPFYGEHVSLFPILASVAIFIYMQMT-----TGQSMQANQQ 528 Query: 524 -------------PVVFVFALSSFPAGLIIYWSWSNVISI 550 P++ +F +++ +GL +Y+ SN+I+I Sbjct: 529 PGMPNMKFLMYLSPIMMLFFFNNYASGLSLYYFTSNLITI 568 >gi|46446715|ref|YP_008080.1| putative inner membrane protein translocase component YidC [Candidatus Protochlamydia amoebophila UWE25] gi|46400356|emb|CAF23805.1| putative 60 kDa inner-membrane protein [Candidatus Protochlamydia amoebophila UWE25] Length = 866 Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 129/237 (54%), Gaps = 22/237 (9%) Query: 337 GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 GWF FI++P + +LM +F+ L ++ ++I+L TV ++L+ +PL S M+ I Sbjct: 616 GWFTFISEPFAKFLLILMKFFHYLTNSWALSIVLLTVSLRLMLYPLNTWSTKSMVRMQQI 675 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 P++ ++EK+K+ P + Q ++ LY+ +NP +GC P+L+Q+P ++ ++ S Sbjct: 676 APQVTAIQEKYKKDPKKA-QLEIMSLYRERGVNPASGCLPLLIQMPFLIGMFDLLKSSFA 734 Query: 453 MRHAPF-WGWIKDLAAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSP 509 +R APF GWI DL A D LF P + G + PI++ L MF+Q + MS Sbjct: 735 LRGAPFISGWIDDLTAPD-----VLFSWSKPIFFIG-TEFHLLPILLGLVMFLQQRFMSS 788 Query: 510 PPAD--------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P D + Q + M VVF +FP+GL IYW S ++ +VQQ + K Sbjct: 789 GPKDLSQMTDQQRQQRAMGTMMTVVFAVMFYNFPSGLNIYWLSSMLLGMVQQWFVSK 845 >gi|45656063|ref|YP_000149.1| hypothetical protein LIC10157 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|73921529|sp|Q72VY8|OXAA_LEPIC RecName: Full=Inner membrane protein oxaA gi|1902825|dbj|BAA19448.1| ORF2 [Leptospira interrogans] gi|2780768|dbj|BAA24371.1| ORF2; putative [Leptospira interrogans] gi|45599296|gb|AAS68786.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 627 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 121/197 (61%), Gaps = 5/197 (2%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + N+G +I++ + KL+F+PL +KQ S M+ + P++ + EKF P QK M Sbjct: 419 IPNYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTM- 477 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK +N+NP+ GC P+++QIP+F A+Y S ++++ ++PF W+KDL ++P I+T Sbjct: 478 ELYKKNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSPFL-WVKDL--SEPDVIWTS 534 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 I P++ + + + ++M + Q +M+ D Q M++ MPV+ ++ + P+ Sbjct: 535 PAI-PYFTQTGIGLNLLALLMVGTQVFQTRMTSVSMDPNQKMLMYVMPVMMLYIFWNMPS 593 Query: 537 GLIIYWSWSNVISIVQQ 553 G+ +YW++ NV+SI QQ Sbjct: 594 GVTLYWTFQNVLSIGQQ 610 >gi|24212878|ref|NP_710359.1| preprotein translocase subunit YidC [Leptospira interrogans serovar Lai str. 56601] gi|38502900|sp|P97041|OXAA_LEPIN RecName: Full=Inner membrane protein oxaA gi|24193541|gb|AAN47377.1| preprotein translocase subunit YidC [Leptospira interrogans serovar Lai str. 56601] Length = 627 Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 121/197 (61%), Gaps = 5/197 (2%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + N+G +I++ + KL+F+PL +KQ S M+ + P++ + EKF P QK M Sbjct: 419 IPNYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTM- 477 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK +N+NP+ GC P+++QIP+F A+Y S ++++ ++PF W+KDL ++P I+T Sbjct: 478 ELYKKNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSPFL-WVKDL--SEPDVIWTS 534 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 I P++ + + + ++M + Q +M+ D Q M++ MPV+ ++ + P+ Sbjct: 535 PAI-PYFTQTGIGLNLLALLMVGTQVFQTRMTSVSMDPNQKMLMYVMPVMMLYIFWNMPS 593 Query: 537 GLIIYWSWSNVISIVQQ 553 G+ +YW++ NV+SI QQ Sbjct: 594 GVTLYWTFQNVLSIGQQ 610 >gi|163755913|ref|ZP_02163030.1| putative inner membrane protein translocase component YidC [Kordia algicida OT-1] gi|161324084|gb|EDP95416.1| putative inner membrane protein translocase component YidC [Kordia algicida OT-1] Length = 640 Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 92/329 (27%), Positives = 169/329 (51%), Gaps = 45/329 (13%) Query: 250 SWLGISDKYWASVFI---PSKETSFHSQ---FKYLSDGHARYQAKFSANEITILPGKSIT 303 +WLG ++ S+ + P K + ++ + + + F A L G + Sbjct: 275 TWLGYKQHFFTSILLTDDPFKTATISTENIVDSEMPEKDVEFLKNFGATIPLELKGGELN 334 Query: 304 TTNFLFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAK----PMFMLMSYFYNLV 357 T L+ G ++ + Y+++L +P + WG F +I + P+F L+S F Sbjct: 335 YTMDLYHGPTDYDILSKYDRNLDEIVP-----LGWGIFGWINRFFLIPLFGLLSSFLPA- 388 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GIAI++ T+ V+LL P+ K Y+S A MK I+P+I+E+ EK+K + Q+ M + Sbjct: 389 ---GIAIIVMTILVRLLLSPITYKSYLSQAKMKVIRPEINEINEKYKDDAMKKQQETM-K 444 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LY ++P+AGC P L+QIPVF+A++ + E+R F W +DL++ D Sbjct: 445 LYGKAGVSPMAGCIPALMQIPVFYALFMFFPSAFELRQKSFL-WAEDLSSYDT------I 497 Query: 478 GILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSP--------PPADKG-------QAMILN 521 LPF +P + H+ ++PI+ S+++F M+M+ P +G ++ Sbjct: 498 AQLPFNIPVYGDHISLFPILASIAIFFYMRMTTGQQMSSMQQPTQEGMPDMSKMMKYMMY 557 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISI 550 + P++ +F +++ +GL +Y+ SN+I+I Sbjct: 558 FSPLMMLFFFNNYASGLSLYYFVSNLITI 586 >gi|78189983|ref|YP_380321.1| Oxa1/60 kDa IMP family protein [Chlorobium chlorochromatii CaD3] gi|123579125|sp|Q3ANZ7|OXAA_CHLCH RecName: Full=Inner membrane protein oxaA gi|78172182|gb|ABB29278.1| protein translocase subunit yidC [Chlorobium chlorochromatii CaD3] Length = 584 Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 93/323 (28%), Positives = 172/323 (53%), Gaps = 25/323 (7%) Query: 250 SWLGISDKYWASVFIP-SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF- 307 +W+G+ +KY+ + IP SK + + K + H ++ +A +++ LP + N Sbjct: 253 TWVGVRNKYFTAALIPQSKSNGIYLEGKREAGNH--FENYLAALKMS-LPASATEVHNTF 309 Query: 308 -LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM--FMLMSYFY---NLVGNFG 361 ++ G ++ T+ L E ++D+GW + + +P +M++ F + N+G Sbjct: 310 TMYVGPLDYNTVKAQGVGL-----EKIMDFGWDW-LTRPFAEWMILPVFNWLNGFISNYG 363 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 I I++ VKL+ +PL+ S M +QP + EL+ K+K +P + +Q + ++Y+ Sbjct: 364 IIIIIFAFLVKLVTYPLSMASTKSMKKMAALQPVLQELQVKYKDNPAK-MQSELSRIYRE 422 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NP+ GC P LLQ+P+ FA++ V S+++R F W KDL+ P +IF +P Sbjct: 423 AGVNPVGGCLPTLLQMPLLFAMFYVFRSSIQLRQHGFL-WAKDLSV--PDSIFDFGFAIP 479 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI-LNWMPVVFVFALSSFPAGLII 540 Y H+ +PI+M+ ++++Q K++P Q I L PV+ +F ++ PAGL + Sbjct: 480 LYGD---HIAFFPILMAGTVYLQQKITPTAQPNEQMKIMLVLFPVMMLFFFNNMPAGLGL 536 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 Y+ N+ S+ QQ I K A+ Sbjct: 537 YYLMFNIFSVAQQFYINKTTTAD 559 >gi|283782053|ref|YP_003372808.1| 60 kDa inner membrane insertion protein [Pirellula staleyi DSM 6068] gi|283440506|gb|ADB18948.1| 60 kDa inner membrane insertion protein [Pirellula staleyi DSM 6068] Length = 841 Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 87/285 (30%), Positives = 147/285 (51%), Gaps = 37/285 (12%) Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF- 353 TI PG+++ +F G KE + Y LI++GW Y A P F+L S Sbjct: 535 TIAPGETLVHNYRVFFGPKEPDVLKDY-------GMTSLIEYGWSY-AAIPAFILRSVLE 586 Query: 354 --YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 Y+++ N+GIAI+L TV V+ P++ KQ S A M+ + P++ +++EK+ + + Sbjct: 587 TIYSIIPNYGIAIILLTVIVRSAMIPVSLKQAKSAAMMQQLAPEMAKIKEKYADNMEKQS 646 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA---PFWGWIKDLAAA 468 Q A+ +LY HN NP GC P+ +Q+PVF +Y+ +S+ +E+R A P W +LA Sbjct: 647 Q-AIRELYAKHNFNPFGGCLPVFIQLPVFIGLYRCLSVDIELRDAALFPGIAWASNLAGP 705 Query: 469 D-----PTNIFTLFG------ILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQ 516 D +F++ G + PF+ ++P+I +Q KM +PP D+ Sbjct: 706 DKLFYWKDYVFSMMGDEANGWLGPFF-------NVFPLITVSLFLVQQKMFTPPATDEQT 758 Query: 517 AM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 AM ++ +M V PAGL +Y+ S++ I ++ ++ K Sbjct: 759 AMQQKMMTYMTVFMGVMFYKVPAGLCVYFITSSLWGIAERKLLPK 803 >gi|261749487|ref|YP_003257173.1| putative inner membrane protein translocase component YidC [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497580|gb|ACX84030.1| putative inner membrane protein translocase component YidC [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 604 Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 95/333 (28%), Positives = 167/333 (50%), Gaps = 42/333 (12%) Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSK-------ETSFHSQFKYLSDGHARYQAKFS 290 E+ +ISN + W+ +++A++FIP K + S +L + K Sbjct: 242 EEKNISNLN----WVAYKQQFFATIFIPKKPLKDCFIRSENFSSGVFLKKIQSNILLKIK 297 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAKPMFM 348 +E +P + L+ G +F + +++ + IP WG+ +I K F+ Sbjct: 298 EHEEVNIPFQ-------LYFGPLDFSLLKKFDQKIENIIP-----FGWGFLKWINKYFFL 345 Query: 349 LMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 + F N+GI I+L T+ VKL+ P+ KQY +A MK I+P+IDE+ KF+ S Sbjct: 346 EIFQFLEKTNLNYGIIIILMTIVVKLILSPITYKQYKLSAMMKLIRPEIDEINNKFRNSD 405 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 P Q+AM++LY+ INP++GC+ L QIP+F++++K + +R F W+ DL + Sbjct: 406 PLKKQRAMMELYQKAGINPMSGCFSALFQIPIFYSLFKFFPTLINLRGKSFL-WVDDLTS 464 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA---------- 517 D +I L +PFY HV + ++ S ++ + K+S Sbjct: 465 YD--SILELPFSIPFYGN---HVSLLTLLYSFALLVYTKLSNNVGSNDTLNNQNNASDMP 519 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 IL MP++ + ++S+ +GL +Y+ SN+I+I Sbjct: 520 FILYLMPLIMLLFINSYASGLSLYYFISNIINI 552 >gi|194335113|ref|YP_002016973.1| 60 kDa inner membrane insertion protein [Prosthecochloris aestuarii DSM 271] gi|254773012|sp|B4S6X1|OXAA_PROA2 RecName: Full=Inner membrane protein oxaA gi|194312931|gb|ACF47326.1| 60 kDa inner membrane insertion protein [Prosthecochloris aestuarii DSM 271] Length = 584 Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/340 (29%), Positives = 175/340 (51%), Gaps = 37/340 (10%) Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 SL++ SD K+ W+ KY+ + IPS ET + YL+ R Sbjct: 231 SLLKLDASDQSKTYREEQSGVAGWVAARTKYFVAAMIPSSET----EGVYLA--GKRLAG 284 Query: 288 KFSANEITILPGK------SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY- 340 + N T L + S + L+ G ++ ++ +L E ++D+GW + Sbjct: 285 EPFENYTTALKFRVPSDESSFKESLRLYVGPIDYNVLNALGVNL-----EKIMDFGWDWL 339 Query: 341 ------FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 +I P+F L++ F +GN+G+ I++ +KL+ +PL S M +QP Sbjct: 340 TRPFAEYIILPIFDLLNKF---IGNYGLIIIIFAFLIKLVTYPLTMASTKSMKKMSALQP 396 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 + E++EK+K +P + LQ + ++YK +NPL GC P++LQ+P+ FA++ V S+++R Sbjct: 397 MMKEIQEKYKDNPAK-LQSELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQLR 455 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-- 512 F W DL+ P +I +P Y H+ ++PI+M++++F+Q K++P Sbjct: 456 QHGFL-WANDLSV--PDSILDFGFSIPLYGD---HIALFPILMAVAVFLQQKITPTAQTN 509 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 D+ +AMI + PV+ + ++ PAGL +Y+ NV SI Q Sbjct: 510 DQMKAMIYIF-PVMMLLFFNNMPAGLGLYYLMFNVFSIAQ 548 >gi|15639934|ref|NP_219385.1| putative inner membrane protein translocase component YidC [Treponema pallidum subsp. pallidum str. Nichols] gi|189026172|ref|YP_001933944.1| inner membrane protein translocase component YidC [Treponema pallidum subsp. pallidum SS14] gi|3323271|gb|AAC65906.1| membrane protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018747|gb|ACD71365.1| membrane protein [Treponema pallidum subsp. pallidum SS14] Length = 665 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/217 (34%), Positives = 133/217 (61%), Gaps = 14/217 (6%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ FY L+ N+G+AI+L T+ +K+LFFPL K+ +++ M+ +QP + ++E++K + Sbjct: 449 LLRLFYTLIPNWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQPHMQRIQERYKGN-T 507 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-WIKDLAA 467 Q + + M +LY+ NPL+GC P L+Q+P+ FA+Y++ + E R A F WI DL+ Sbjct: 508 QKIHEEMAKLYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPYWIPDLSL 567 Query: 468 ADPTNIFTLFGILPFYLP--GFMHVGIWPIIMSLS--MFIQMKMSPPPADKGQAM-ILNW 522 AD +++T LPF LP + + + P++ +S MF ++ P + +M I+ + Sbjct: 568 AD--SVWT----LPFALPVTQWTQMRMLPVLYVVSQIMFSKLTQVPHTEQQKTSMTIMTY 621 Query: 523 -MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MP+ F F P+GL++YW+ N +++VQQ V+ + Sbjct: 622 VMPLFFFFFFYDAPSGLLVYWTAMNGVTLVQQLVMKR 658 >gi|38502857|sp|O66103|OXAA_TREPA RecName: Full=Inner membrane protein oxaA gi|291060304|gb|ADD73039.1| inner membrane protein OxaA [Treponema pallidum subsp. pallidum str. Chicago] Length = 622 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/217 (34%), Positives = 133/217 (61%), Gaps = 14/217 (6%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ FY L+ N+G+AI+L T+ +K+LFFPL K+ +++ M+ +QP + ++E++K + Sbjct: 406 LLRLFYTLIPNWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQPHMQRIQERYKGN-T 464 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-WIKDLAA 467 Q + + M +LY+ NPL+GC P L+Q+P+ FA+Y++ + E R A F WI DL+ Sbjct: 465 QKIHEEMAKLYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPYWIPDLSL 524 Query: 468 ADPTNIFTLFGILPFYLP--GFMHVGIWPIIMSLS--MFIQMKMSPPPADKGQAM-ILNW 522 AD +++T LPF LP + + + P++ +S MF ++ P + +M I+ + Sbjct: 525 AD--SVWT----LPFALPVTQWTQMRMLPVLYVVSQIMFSKLTQVPHTEQQKTSMTIMTY 578 Query: 523 -MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MP+ F F P+GL++YW+ N +++VQQ V+ + Sbjct: 579 VMPLFFFFFFYDAPSGLLVYWTAMNGVTLVQQLVMKR 615 >gi|298208263|ref|YP_003716442.1| putative inner membrane protein translocase component YidC [Croceibacter atlanticus HTCC2559] gi|83848184|gb|EAP86054.1| putative inner membrane protein translocase component YidC [Croceibacter atlanticus HTCC2559] Length = 622 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 91/342 (26%), Positives = 174/342 (50%), Gaps = 37/342 (10%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI---PSKETSFHSQ-FKYLSDG 281 D L +Q ++D E+ ++ ++ ++ S+ + P K F S+ D Sbjct: 249 DDYLGQQDFTDDEEEDVT-------YVAFKQHFFTSILLTDTPFKTGKFTSKNLVEDEDI 301 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL--AIPRFEMLIDWGWF 339 Y +F+A G I + G ++ ++ Y+++L IP + WG F Sbjct: 302 DTVYTKEFTAQFPLETKGGEIDYNMNWYYGPSDYKILNDYDRNLDEVIP-----LGWGIF 356 Query: 340 YFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +I + +F+ F G ++G+AI++ T+ V+++ P+ K Y+S A MK ++P+I+ Sbjct: 357 GWINRYVFIPFFAFITSFGVVSYGVAIIIMTIVVRIVLSPVTYKSYLSQAKMKVLKPEIN 416 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 EL EK+K +P + Q+ M +LY +P++GC P L+Q+PVF+A+++ + ++R Sbjct: 417 ELNEKYKDNPMKKQQETM-KLYSKAGASPMSGCLPALMQLPVFYALFQFFPSAFQLRQKS 475 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMS-------- 508 F W DL++ D LPF +P + HV ++PI+ S+++F M M+ Sbjct: 476 FL-WADDLSSYDT------IAELPFSIPFYGDHVSLFPILASVAIFFYMTMTTGQTMQQN 528 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 P I+ P++ +F +++ +GL +Y+ SN+I+I Sbjct: 529 SQPGMPNMKFIMYLSPLLMLFFFNNYASGLSLYYFISNLITI 570 >gi|152977685|ref|YP_001377202.1| OxaA-like protein precursor [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026437|gb|ABS24207.1| 60 kDa inner membrane insertion protein [Bacillus cytotoxicus NVH 391-98] Length = 255 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/234 (35%), Positives = 127/234 (54%), Gaps = 31/234 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ H +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKHGVNPLAGCLPIFIQMPILFAFYHAIMRTAEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSPPP 511 + F W DL AD P+Y I PI+ +++ FIQ K M+ Sbjct: 156 KQHSFL-WF-DLGHAD-----------PYY--------ILPIVAAITTFIQQKIAMTGTV 194 Query: 512 ADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q ++ W MP++ + +FPA L +YW N+ I Q +I G EI Sbjct: 195 GQNPQMAMMVWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYMI---KGPEI 245 >gi|53713895|ref|YP_099887.1| putative inner membrane protein translocase component YidC [Bacteroides fragilis YCH46] gi|265764240|ref|ZP_06092808.1| inner membrane protein oxaA [Bacteroides sp. 2_1_16] gi|81690656|sp|Q64T26|OXAA_BACFR RecName: Full=Inner membrane protein oxaA gi|52216760|dbj|BAD49353.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|263256848|gb|EEZ28194.1| inner membrane protein oxaA [Bacteroides sp. 2_1_16] gi|301163574|emb|CBW23125.1| conserved hypothetical membrane protein [Bacteroides fragilis 638R] Length = 618 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 100/357 (28%), Positives = 183/357 (51%), Gaps = 38/357 (10%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKE---TSFHSQFKYLSDGHARYQAKFSAN 292 D EKS E W+ +++++SVFI ++ T+ S+ + G+ + +SA Sbjct: 242 DDEKS----VSERLDWIAFKNQFFSSVFIAEQDFEKTTVKSKMEKQGSGYIK---DYSAE 294 Query: 293 EITILP--GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFM 348 T GK T F F G + T+ +K ++E+ L+ GW ++ Sbjct: 295 MSTFFDPTGKQPTDMYFYF-GPNHYKTLTALDKGRE-EKWELNNLVYLGWPLIRWINKWI 352 Query: 349 LMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-K 404 ++ F L G + GI ++L T+ VK++ FP K Y+S+A M+ ++PKIDE+ +K+ K Sbjct: 353 TINVFDWLSGWGLSMGIVLLLLTIMVKIVVFPATWKTYMSSAKMRVLKPKIDEINKKYPK 412 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R F W D Sbjct: 413 QEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQSFL-WADD 471 Query: 465 LAAADPTNIFTLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMI 519 L+ D F PF++P F+ H+ ++ ++M+++ + K + D G Q Sbjct: 472 LSTYDA------FITFPFHIP-FLGNHLSLFCLLMTVTNILNTKYTMQQQDTGAQPQMAA 524 Query: 520 LNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + W MP++F+F L+ +P+GL Y+ S +IS+V +I++ E L+ L + Sbjct: 525 MKWMMYLMPIMFLFVLNDYPSGLNYYYFISTLISVVTM-IILRRTTDENKLLTELEA 580 >gi|60682104|ref|YP_212248.1| putative inner membrane protein translocase component YidC [Bacteroides fragilis NCTC 9343] gi|253567112|ref|ZP_04844563.1| inner membrane protein oxaA [Bacteroides sp. 3_2_5] gi|81314832|sp|Q5LC41|OXAA_BACFN RecName: Full=Inner membrane protein oxaA gi|60493538|emb|CAH08325.1| conserved hypothetical membrane protein [Bacteroides fragilis NCTC 9343] gi|251944236|gb|EES84745.1| inner membrane protein oxaA [Bacteroides sp. 3_2_5] Length = 618 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 100/357 (28%), Positives = 183/357 (51%), Gaps = 38/357 (10%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKE---TSFHSQFKYLSDGHARYQAKFSAN 292 D EKS E W+ +++++SVFI ++ T+ S+ + G+ + +SA Sbjct: 242 DDEKS----VSERLDWIAFKNQFFSSVFIAEQDFEKTTVKSKMEKQGSGYIK---DYSAE 294 Query: 293 EITILP--GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFM 348 T GK T F F G + T+ +K ++E+ L+ GW ++ Sbjct: 295 MSTFFDPTGKQPTDMYFYF-GPNHYKTLTALDKGRE-EKWELNNLVYLGWPLIRWINKWI 352 Query: 349 LMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-K 404 ++ F L G + GI ++L T+ VK++ FP K Y+S+A M+ ++PKIDE+ +K+ K Sbjct: 353 TINVFDWLSGWGLSMGIVLLLLTIMVKIVVFPATWKTYMSSAKMRVLKPKIDEINKKYPK 412 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R F W D Sbjct: 413 QEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQSFL-WADD 471 Query: 465 LAAADPTNIFTLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMI 519 L+ D F PF++P F+ H+ ++ ++M+++ + K + D G Q Sbjct: 472 LSTYDA------FITFPFHIP-FLGNHLSLFCLLMTVTNILNTKYTMQQQDTGAQPQMAA 524 Query: 520 LNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + W MP++F+F L+ +P+GL Y+ S +IS+V +I++ E L+ L + Sbjct: 525 MKWMMYLMPIMFLFVLNDYPSGLNYYYFISTLISVVTM-IILRRTTDENKLLTELEA 580 >gi|254724144|ref|ZP_05185929.1| OxaA-like protein precursor [Bacillus anthracis str. A1055] Length = 255 Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QPK+ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPKM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF---DLGQAD-----------PYY--------ILPVVAAITTFIQQKLA-MAG 192 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM+L MP++ + +FPA L +YW N+ I Q +I G EI Sbjct: 193 TAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLI---KGPEI 245 >gi|193216427|ref|YP_001997626.1| 60 kDa inner membrane insertion protein [Chloroherpeton thalassium ATCC 35110] gi|254772769|sp|B3QYV6|OXAA_CHLT3 RecName: Full=Inner membrane protein oxaA gi|193089904|gb|ACF15179.1| 60 kDa inner membrane insertion protein [Chloroherpeton thalassium ATCC 35110] Length = 586 Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 84/323 (26%), Positives = 167/323 (51%), Gaps = 24/323 (7%) Query: 251 WLGISDKYWASVFIPSKETS--FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF- 307 W+ + KY+ + I +ET F + +D + ++ A ++ + ++ + F Sbjct: 259 WVAVRSKYFVAGLISKEETEGVFMEGSRNTNDEKSVFEDYMVALKLKLPSDQTTVNSRFS 318 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP-----MFMLMSYFYNLVGNFGI 362 ++ G ++ + +L E +ID+GW + + +P + + ++ N V ++G+ Sbjct: 319 VYIGPLKYDLVKATGSEL-----EKIIDFGWEW-VTRPFAEYLIIPIFNFLNNHVDSYGV 372 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 I+L +F+KL+ +PL S M +QP++ ++E++K +P + LQ + +Y+ Sbjct: 373 IIILFALFIKLVTYPLTMASTKSMKKMAALQPQLKAIQEQYKDNPEK-LQAEISGIYREA 431 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NPL GC P ++Q+P+ FA++ V S+++R F W DL+ P +I LPF Sbjct: 432 GVNPLGGCLPTVIQMPLLFAMFYVFRSSIQLRQEGFL-WSNDLSV--PDSILD----LPF 484 Query: 483 YLPGFM-HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLII 540 +P + HV + PI+M +++F Q K++P Q + ++ P + + ++ P+GL + Sbjct: 485 SIPLYGDHVSVIPILMGVAVFFQQKLTPSTQTNDQMKFMMYLFPGMMLIFFNNMPSGLGL 544 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 Y+ NV SI QQ I + E Sbjct: 545 YYLMFNVFSIAQQFYINQTTETE 567 >gi|126643001|ref|YP_001085985.1| hypothetical protein A1S_2980 [Acinetobacter baumannii ATCC 17978] gi|126388885|gb|ABO13383.1| hypothetical protein A1S_2980 [Acinetobacter baumannii ATCC 17978] Length = 164 Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 68/170 (40%), Positives = 103/170 (60%), Gaps = 20/170 (11%) Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ I P++ ++E+F + + Q+ M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ Sbjct: 1 MRVIAPEMQRMKEEFGEDRMRFSQE-MMALYKREQVNPLSGCLPLLLQMPIFLALYWVLM 59 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S+E+RHAP+ GWI+DL+A DP I P+IM +MF Q ++ Sbjct: 60 ESVELRHAPWLGWIQDLSAMDPWFIL-------------------PLIMGATMFAQQMLN 100 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P PAD QA + MP++F + FPAGL++YW +N I+I+QQ I K Sbjct: 101 PQPADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINK 150 >gi|256819005|ref|YP_003140284.1| putative inner membrane protein translocase component YidC [Capnocytophaga ochracea DSM 7271] gi|256580588|gb|ACU91723.1| 60 kDa inner membrane insertion protein [Capnocytophaga ochracea DSM 7271] Length = 621 Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 100/345 (28%), Positives = 175/345 (50%), Gaps = 41/345 (11%) Query: 225 GDK-SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI---PSKETSFHSQFKYLSD 280 GD+ S + Q +D +K E +W+ + SV I P + F S +S+ Sbjct: 245 GDRISRLSQGGNDEQK------EEKVNWVAYKQHLFTSVLISDNPFAKGDFVSHNIAMSE 298 Query: 281 GHARYQAKFSANEITILP-----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 G K++ N +T LP G+ + +F F G ++ + Y + + + Sbjct: 299 GK---DVKYTKNFLTSLPIQAKSGELSESLHFYF-GPSDYNVLKQYNDKYELTEL-IPLG 353 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 WG F ++ K +F+ + YN + N+ G+ I+L T+ V+LL P+ K YVS A MK + Sbjct: 354 WGIFGWLNKWLFIPL---YNFLTNYFSVGLVIILMTIIVRLLLSPIVYKSYVSQAKMKVL 410 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 +P+I+E+ +K+++ P Q+ + LY +NPL+GC P LLQ+PVF A++ Sbjct: 411 RPEIEEINKKYEE--PMKRQQETMALYNKAGVNPLSGCIPALLQLPVFLALFNFFPTEFG 468 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI----QMKMS 508 +R F W DL++ D IF L +PFY HV ++P++ S+++FI M + Sbjct: 469 LRQKSFL-WAHDLSSYDA--IFELPFSIPFYGS---HVSLFPLLASIAIFIYSMMTMAQT 522 Query: 509 PPPADKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 P G ++ PV+ +F +++ +GL +Y+ SN+++I Sbjct: 523 AQPQQPGMPNMKFLIYLSPVMMLFFFNNYASGLSLYYFISNLLTI 567 >gi|270285312|ref|ZP_06194706.1| putative inner membrane protein translocase component YidC [Chlamydia muridarum Nigg] gi|270289329|ref|ZP_06195631.1| putative inner membrane protein translocase component YidC [Chlamydia muridarum Weiss] gi|301336709|ref|ZP_07224911.1| putative inner membrane protein translocase component YidC [Chlamydia muridarum MopnTet14] Length = 785 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 95/316 (30%), Positives = 160/316 (50%), Gaps = 30/316 (9%) Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP-GKSITTTNFL-FAGAKEFP 316 +AS FIP + ++ LS Y A +LP K F+ +AG P Sbjct: 457 YASSFIPG--NAVPTRLTQLSPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLSEP 514 Query: 317 TI------HHYEKDLAIPRFEMLIDWGWFYFIAKP----MFMLMSYFYNLVGNFGIAIML 366 T+ H K + + + G+F FI +P +F++M +F L G++GI+I+L Sbjct: 515 TLKALDRAHTNHKGESPEYVDAIAFRGFFSFITEPFAALLFIIMKFFQFLTGSWGISIIL 574 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 T+ +KL+ +PL S M+ + P I ++++K+K+ P + Q ++ LYK + +NP Sbjct: 575 LTIVLKLVLYPLNAWSIRSMRRMQKLSPYIQDIQQKYKREPKRA-QMEIMALYKVNKVNP 633 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFG-ILPFYL 484 + GC P+++QIP A++ ++ S +R A F GWI +L A D LF P + Sbjct: 634 ITGCLPLIIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWETPIWF 688 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQAMILNWMPVVFVFALSSFPAG 537 G + PI++ + MF Q K+S P +D + Q + M ++F F +FP+G Sbjct: 689 IG-KEFHLLPILLGIVMFAQQKISAIKRSGPVSDQQRQQEAMGTMMALLFTFMFYNFPSG 747 Query: 538 LIIYWSWSNVISIVQQ 553 L IYW S ++ ++QQ Sbjct: 748 LNIYWLSSMLLGVIQQ 763 >gi|189501692|ref|YP_001957409.1| putative inner membrane protein translocase component YidC [Candidatus Amoebophilus asiaticus 5a2] gi|254772744|sp|B3ER28|OXAA_AMOA5 RecName: Full=Membrane protein oxaA gi|189497133|gb|ACE05680.1| hypothetical protein Aasi_0237 [Candidatus Amoebophilus asiaticus 5a2] Length = 596 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 79/250 (31%), Positives = 139/250 (55%), Gaps = 24/250 (9%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 ++ W Y I P+F S+ V N+G+ I++ +F+KLL PL+ K Y+S A MK + Sbjct: 336 IVKWINLYLII-PIF---SFIEKYVSNYGLVILILVIFIKLLLLPLSYKSYISMAEMKVL 391 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 +P +D L+ K+ Q +Q ++LY+ INPL+GC P+LLQ+P+ A++ +++ Sbjct: 392 KPTLDALKAKYGND-MQSVQMEQVKLYREMGINPLSGCIPVLLQMPILLAMFNFFPNAID 450 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM----KMS 508 +R F W DL+ D I L +PFY HV ++ ++M+ S + +++ Sbjct: 451 LRQKAFL-WAPDLSTYDA--IINLPFQIPFYGS---HVSLFTLLMTASTILYTWSSNQVN 504 Query: 509 PPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P +G +++ +P+ F+F L+SFPAGL Y+ SN+ + QQA+I + Sbjct: 505 TP---QGPMKTMSYLLPITFMFILNSFPAGLSFYYFVSNLFTFAQQALIKRFVNE----- 556 Query: 568 DRLRSTFSKN 577 D++++ +KN Sbjct: 557 DKIKAKLAKN 566 >gi|15835140|ref|NP_296899.1| putative inner membrane protein translocase component YidC [Chlamydia muridarum Nigg] gi|38503223|sp|Q9PKE3|OXAA_CHLMU RecName: Full=Inner membrane protein oxaA gi|7190563|gb|AAF39364.1| inner membrane protein, putative [Chlamydia muridarum Nigg] Length = 787 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 95/316 (30%), Positives = 160/316 (50%), Gaps = 30/316 (9%) Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP-GKSITTTNFL-FAGAKEFP 316 +AS FIP + ++ LS Y A +LP K F+ +AG P Sbjct: 459 YASSFIPG--NAVPTRLTQLSPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLSEP 516 Query: 317 TI------HHYEKDLAIPRFEMLIDWGWFYFIAKP----MFMLMSYFYNLVGNFGIAIML 366 T+ H K + + + G+F FI +P +F++M +F L G++GI+I+L Sbjct: 517 TLKALDRAHTNHKGESPEYVDAIAFRGFFSFITEPFAALLFIIMKFFQFLTGSWGISIIL 576 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 T+ +KL+ +PL S M+ + P I ++++K+K+ P + Q ++ LYK + +NP Sbjct: 577 LTIVLKLVLYPLNAWSIRSMRRMQKLSPYIQDIQQKYKREPKRA-QMEIMALYKVNKVNP 635 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFG-ILPFYL 484 + GC P+++QIP A++ ++ S +R A F GWI +L A D LF P + Sbjct: 636 ITGCLPLIIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWETPIWF 690 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQAMILNWMPVVFVFALSSFPAG 537 G + PI++ + MF Q K+S P +D + Q + M ++F F +FP+G Sbjct: 691 IG-KEFHLLPILLGIVMFAQQKISAIKRSGPVSDQQRQQEAMGTMMALLFTFMFYNFPSG 749 Query: 538 LIIYWSWSNVISIVQQ 553 L IYW S ++ ++QQ Sbjct: 750 LNIYWLSSMLLGVIQQ 765 >gi|167762902|ref|ZP_02435029.1| hypothetical protein BACSTE_01266 [Bacteroides stercoris ATCC 43183] gi|167699242|gb|EDS15821.1| hypothetical protein BACSTE_01266 [Bacteroides stercoris ATCC 43183] Length = 615 Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 112/440 (25%), Positives = 205/440 (46%), Gaps = 52/440 (11%) Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTV------TNNSIDQIRFSPRGRIMRHK 206 T ++L +A+ I F+ + D + + +D V N I +S R R + K Sbjct: 156 TVTMRLAADSASYIDFKYAMHNDTYLVDFTIDAVGMANKLANTDYVDIEWSQRARQI-EK 214 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 T N E + GD + Y K+ E W+ +++++SVF+ Sbjct: 215 GYTYENRLA--ELTYKITGDGT----DYLSAGKNDEKEVAERLDWIAFKNQFFSSVFLAD 268 Query: 267 ---KETSFHSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 ++T +S+ + G+ + Y A+ S P T F + G + T+ + Sbjct: 269 ANFEKTKLNSKLETQGSGYIKDYSAEMST---AFDPTGKTPTQLFFYFGPNHYKTLTALD 325 Query: 323 KDLAIPRFEM---------LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 K ++E+ LI W +F L S+ ++ GI ++L T+ VK Sbjct: 326 KGRE-NKWELNRLVYLGWPLIRWINKWFTINIFDWLSSWGLSM----GIVLLLMTLIVKA 380 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 + FP K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P Sbjct: 381 VVFPATWKTYISSAKMRVLKPKIDEIGKKYPKQEDAMKKQQEVMALYSQYGVSPMGGCLP 440 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM--HV 490 +L+Q P+ A++ + ++E+R F W DL+ D F PF++P F+ H+ Sbjct: 441 MLIQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDA------FINFPFHIP-FLGSHL 492 Query: 491 GIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFVFALSSFPAGLIIYWS 543 ++ ++M+++ + K D G Q + W MPV+F+F L+ +P+GL Y+ Sbjct: 493 SLFCLLMTVTNILNTKFMMQQQDTGANPQMAAMKWMSYLMPVMFLFILNDYPSGLNYYYF 552 Query: 544 WSNVISIVQQAVIMKMHGAE 563 S ++S+V ++ KM E Sbjct: 553 ISTLVSVVTTIIMRKMTNEE 572 >gi|322437354|ref|YP_004219566.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX9] gi|321165081|gb|ADW70786.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX9] Length = 607 Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 123/468 (26%), Positives = 203/468 (43%), Gaps = 72/468 (15%) Query: 153 TTPIKLVFKN-ANNILFERTISLDEHYLFKIVDTVTNNS--IDQIRFSPRGRIMRHKPQT 209 T P L FK + +T S D+ Y+ V N I + P G Sbjct: 164 TAPQTLTFKYVSGEYQVTKTFSFDDTYILHADTQVLRNGSPIRALVAWPGG--------- 214 Query: 210 ATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNFHESNS---WLGISDKYWASVFI 264 FG QE + G + EQK + ++ + N W G SD Y+A++F+ Sbjct: 215 ----FGDQEDAKSYGGSQVDYSQEQKEKHLAVGKVTGGNTLNGSFDWAGASDLYFAAIFL 270 Query: 265 PSKETS-----------FHSQFKYLSDGHA---RYQAKFSANEITI-LPGKSIT-----T 304 P S ++ GH + + +EI + + G ++ T Sbjct: 271 PDAPDSATVATLDSSIIVPKANRHNGLGHGVPVAPKGEPGKDEIKVPIIGAAVGDLSGHT 330 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIA 363 LFAG K + + E L+D+G+F I K +F+ + + V N+G Sbjct: 331 QTRLFAGPKAVAVLRNVHSAGNKTSLEPLLDFGFFGIIGKYLFLALFAIHQYVTPNWGWC 390 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ---SPPQV--LQKAMIQL 418 I++ TV + LL PL K S M+ IQP++D ++ ++K + P+ + ++QL Sbjct: 391 IVILTVLINLLILPLRIKTMQSGLKMQRIQPQMDAVKARYKNLKVTDPKRNEMNAEIMQL 450 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 K + +N GC P L+Q+P+ FA + ++ +E+R A W W+ DL++ADP +I Sbjct: 451 QKDNGVNMFGGCVPTLIQMPLLFAFFGMLPKVVELRQA-HWFWLPDLSSADPYHIL---- 505 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFPA 536 PI+M +S F+ +P P + Q M+ MPV + ++ + Sbjct: 506 ---------------PILMVISQFLVQFYTPSPGVDPQQQKMMAFMMPVFSGYMTWNYSS 550 Query: 537 GLIIYWSWSNVISIVQQAVIMKMH-GAEIGLI--DRLRSTFSKNYNSQ 581 GL +YWS N+ISI Q ++ K G E+ I R R + NS+ Sbjct: 551 GLALYWSVGNLISIATQFIMNKTSIGQEMREIAAKRARRKAGEGVNSK 598 >gi|228472035|ref|ZP_04056803.1| inner membrane protein OxaA [Capnocytophaga gingivalis ATCC 33624] gi|228276647|gb|EEK15360.1| inner membrane protein OxaA [Capnocytophaga gingivalis ATCC 33624] Length = 616 Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 95/311 (30%), Positives = 161/311 (51%), Gaps = 33/311 (10%) Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI-LPGKSITTTNFLFAGA 312 ISDK AS I SK + S+G K A E I ++ + F G Sbjct: 270 ISDKPLASGKISSKNLA-------TSEGDNVQATKAFAAEFPIAFTSGELSESLHFFYGP 322 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK----PMFMLMSYFYNLVGNFGIAIMLTT 368 ++ Y+K+ + + + + WG F +I K P+F L+S F + G+AI++ T Sbjct: 323 SDYHIFKKYDKEYGLTK-AIPLGWGIFGWINKWFVIPVFDLLSSFMAV----GVAIIVLT 377 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV-LQKAMIQLYKTHNINPL 427 + V++L P+ K Y+S A MK ++P+I+E+ K+K S + Q+ + LY +NPL Sbjct: 378 IIVRILLSPIQYKSYLSQAKMKVLRPEIEEINNKYKGSENAMKRQQETMALYSKAGVNPL 437 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 +GC P LLQ+PVFFA++ + +R F W +DL++ D LPF +P + Sbjct: 438 SGCIPALLQMPVFFALFSFFPTAFMLRQKSFM-WAEDLSSYDAV------AQLPFSIPFY 490 Query: 488 M-HVGIWPIIMSLSMFIQMKMSPPPAD--KGQAM-----ILNWMPVVFVFALSSFPAGLI 539 HV ++PI+ S++M I M M+ K + M ++ P++ +F +++ +GL Sbjct: 491 GNHVSLFPILASVTMLIYMLMTTGQMQQTKQEGMPDMRFMMYLSPIMMLFFFNNYASGLS 550 Query: 540 IYWSWSNVISI 550 +Y+ SN+I+I Sbjct: 551 LYYFISNLITI 561 >gi|42784682|ref|NP_981929.1| OxaA-like protein precursor [Bacillus cereus ATCC 10987] gi|42740614|gb|AAS44537.1| stage III sporulation protein J [Bacillus cereus ATCC 10987] Length = 255 Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/223 (35%), Positives = 125/223 (56%), Gaps = 30/223 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+++QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQSLQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFIQMPILFAFYHAIMRTAEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W DL AD P+Y I PI+ +++ FIQ K++ Sbjct: 156 KQHSFL-WF-DLGHAD-----------PYY--------ILPIVAAITTFIQQKLA-MAGT 193 Query: 514 KGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 GQ AM++ MP++ + +FPA L +YW N+ I Q Sbjct: 194 AGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQ 236 >gi|237719464|ref|ZP_04549945.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229451324|gb|EEO57115.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 617 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 91/318 (28%), Positives = 164/318 (51%), Gaps = 27/318 (8%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL--PGKSITTTNF 307 W+ +++++SVFI ++ S + + Y +SA T GK T F Sbjct: 254 DWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMYF 313 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVG---NFGI 362 F G F T+ +K ++E+ L+ GW F+ ++ F L G + GI Sbjct: 314 YF-GPNHFKTLKALDKGRD-EKWELHRLVYLGWPLIRWINQFITINVFDWLSGWGLSMGI 371 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKT 421 +++ T+ VK+L +P K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY Sbjct: 372 VLLILTIMVKVLVYPATWKTYMSSAKMRVLKPKIDEINKKYPKQEDAMKKQQEVMSLYSQ 431 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + ++P+ GC P+LLQ P+ A++ + ++E+R F W DL+ D F P Sbjct: 432 YGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDAIITF------P 484 Query: 482 FYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFVFALS 532 F++P F+ H+ ++ ++M+L+ + K + D G Q + W MP++F+F L+ Sbjct: 485 FHIP-FLGNHLSLFCLLMTLTNILNTKYTMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLN 543 Query: 533 SFPAGLIIYWSWSNVISI 550 +P+GL Y+ S +IS+ Sbjct: 544 DYPSGLNYYYFVSTLISV 561 >gi|293370211|ref|ZP_06616771.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|292634708|gb|EFF53237.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides ovatus SD CMC 3f] Length = 617 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 91/317 (28%), Positives = 164/317 (51%), Gaps = 27/317 (8%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL--PGKSITTTNFL 308 W+ +++++SVFI ++ S + + Y +SA T GK T F Sbjct: 255 WVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMYFY 314 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIA 363 F G F T+ +K ++E+ L+ GW F+ ++ F L G + GI Sbjct: 315 F-GPNHFKTLKALDKGRD-EKWELHRLVYLGWPLIRWINQFITINVFDWLSGWGLSMGIV 372 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTH 422 +++ T+ VK+L +P K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY + Sbjct: 373 LLILTIMVKVLVYPATWKTYMSSAKMRVLKPKIDEINKKYPKQEDAMKKQQEVMSLYSQY 432 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 ++P+ GC P+LLQ P+ A++ + ++E+R F W DL+ D F PF Sbjct: 433 GVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDAIITF------PF 485 Query: 483 YLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFVFALSS 533 ++P F+ H+ ++ ++M+L+ + K + D G Q + W MP++F+F L+ Sbjct: 486 HIP-FLGNHLSLFCLLMTLTNILNTKYTMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLND 544 Query: 534 FPAGLIIYWSWSNVISI 550 +P+GL Y+ S +IS+ Sbjct: 545 YPSGLNYYYFVSTLISV 561 >gi|160885689|ref|ZP_02066692.1| hypothetical protein BACOVA_03693 [Bacteroides ovatus ATCC 8483] gi|156108502|gb|EDO10247.1| hypothetical protein BACOVA_03693 [Bacteroides ovatus ATCC 8483] Length = 617 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 91/317 (28%), Positives = 164/317 (51%), Gaps = 27/317 (8%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL--PGKSITTTNFL 308 W+ +++++SVFI ++ S + + Y +SA T GK T F Sbjct: 255 WVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMYFY 314 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIA 363 F G F T+ +K ++E+ L+ GW F+ ++ F L G + GI Sbjct: 315 F-GPNHFKTLKALDKGRD-EKWELHRLVYLGWPLIRWINQFITINVFDWLSGWGLSMGIV 372 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTH 422 +++ T+ VK+L +P K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY + Sbjct: 373 LLILTIMVKVLVYPATWKTYMSSAKMRVLKPKIDEINKKYPKQEDAMKKQQEVMSLYSQY 432 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 ++P+ GC P+LLQ P+ A++ + ++E+R F W DL+ D F PF Sbjct: 433 GVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDAIITF------PF 485 Query: 483 YLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFVFALSS 533 ++P F+ H+ ++ ++M+L+ + K + D G Q + W MP++F+F L+ Sbjct: 486 HIP-FLGNHLSLFCLLMTLTNILNTKYTMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLND 544 Query: 534 FPAGLIIYWSWSNVISI 550 +P+GL Y+ S +IS+ Sbjct: 545 YPSGLNYYYFVSTLISV 561 >gi|225012688|ref|ZP_03703123.1| 60 kDa inner membrane insertion protein [Flavobacteria bacterium MS024-2A] gi|225003221|gb|EEG41196.1| 60 kDa inner membrane insertion protein [Flavobacteria bacterium MS024-2A] Length = 608 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 92/325 (28%), Positives = 166/325 (51%), Gaps = 27/325 (8%) Query: 246 HESNSWLGISDKYWASVFIPSKE--TSFHSQFKYLSDG--HARYQAKFSAN-EITILPGK 300 E W+ +++++ IP ++ + SD ++ F N +T+ G Sbjct: 250 REGIRWISYRQHFFSAILIPESPIPSASLTSVNLASDESLDEKFTKSFETNYPLTLNKGN 309 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDL--AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 T+ F F G ++ T+ + E DL +IP + WG F +I K +F+ + F + Sbjct: 310 LDTSLTFYF-GPTDYKTLQNLEGDLETSIP-----MGWGIFGWINKFIFLPLFEFLSSFL 363 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++GIAI++ T+ V+L P+ K YVS MK ++P I+ + KFK + Q+ M L Sbjct: 364 SYGIAIIVMTLIVRLAMSPVTYKSYVSQIKMKLLRPDIEVINGKFKDDAVKRQQETM-SL 422 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y NP++GC P L+Q+PVF+A++ ++ +R F W DL++ D ++ L Sbjct: 423 YSRAGANPMSGCIPALIQLPVFYALFSFFPVAFVLRDKSFL-WADDLSSYD--SVLELGF 479 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFI-------QMKMSPPPADKGQAMILNWMPVVFVFAL 531 +PFY HV ++PI+ S+++F Q M P +I+ MP++ +F Sbjct: 480 NIPFYGD---HVSLFPILASIAIFFYTQMTTGQQSMPQQPGMPNMKIIMYLMPLMMLFFF 536 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 +++ +GL +Y+ SN+++I+ VI Sbjct: 537 NNYASGLSLYYFVSNLLTILLMLVI 561 >gi|237714509|ref|ZP_04544990.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406374|ref|ZP_06082923.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294643254|ref|ZP_06721080.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294806447|ref|ZP_06765288.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229445278|gb|EEO51069.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355077|gb|EEZ04168.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292641377|gb|EFF59569.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294446310|gb|EFG14936.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 617 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 91/318 (28%), Positives = 164/318 (51%), Gaps = 27/318 (8%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL--PGKSITTTNF 307 W+ +++++SVFI ++ S + + Y +SA T GK T F Sbjct: 254 DWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMYF 313 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVG---NFGI 362 F G F T+ +K ++E+ L+ GW F+ ++ F L G + GI Sbjct: 314 YF-GPNHFKTLKALDKGRD-EKWELHRLVYLGWPLIRWINQFITINVFDWLSGWGLSMGI 371 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKT 421 +++ T+ VK+L +P K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY Sbjct: 372 VLLILTIMVKVLVYPATWKTYMSSAKMRVLKPKIDEINKKYPKQEDAMKKQQEVMSLYSQ 431 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + ++P+ GC P+LLQ P+ A++ + ++E+R F W DL+ D F P Sbjct: 432 YGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDAIITF------P 484 Query: 482 FYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFVFALS 532 F++P F+ H+ ++ ++M+L+ + K + D G Q + W MP++F+F L+ Sbjct: 485 FHIP-FLGNHLSLFCLLMTLTNILNTKYTMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLN 543 Query: 533 SFPAGLIIYWSWSNVISI 550 +P+GL Y+ S +IS+ Sbjct: 544 DYPSGLNYYYFVSTLISV 561 >gi|229015403|ref|ZP_04172409.1| Membrane protein oxaA 1 [Bacillus cereus AH1273] gi|229026927|ref|ZP_04183250.1| Membrane protein oxaA 1 [Bacillus cereus AH1272] gi|228734385|gb|EEL85056.1| Membrane protein oxaA 1 [Bacillus cereus AH1272] gi|228745882|gb|EEL95878.1| Membrane protein oxaA 1 [Bacillus cereus AH1273] Length = 255 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/237 (36%), Positives = 132/237 (55%), Gaps = 37/237 (15%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I PI+ +++ FIQ K++ Sbjct: 156 SKHTFLWF---DLGQAD-----------PYY--------ILPIVAAITTFIQQKLA-MAG 192 Query: 513 DKGQ----AMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM++ MP+ + VFA+ +FPA L +YW N+ I Q +I G EI Sbjct: 193 TAGQNPQMAMMIWLMPIMILVFAI-NFPAALSLYWVVGNIFGIAQMYLI---KGPEI 245 >gi|315224395|ref|ZP_07866228.1| inner membrane protein OxaA [Capnocytophaga ochracea F0287] gi|314945671|gb|EFS97687.1| inner membrane protein OxaA [Capnocytophaga ochracea F0287] Length = 621 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 98/342 (28%), Positives = 172/342 (50%), Gaps = 35/342 (10%) Query: 225 GDK-SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI---PSKETSFHSQFKYLSD 280 GD+ S + Q +D +K E +W+ + SV I P + F S +S+ Sbjct: 245 GDRISRLSQGGNDEQK------EEKVNWVAYKQHLFTSVLISDNPFAKGDFVSHNIAMSE 298 Query: 281 GHARYQAKFSANEITILP-----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 G K++ N +T LP G+ + +F F G ++ + Y + + + Sbjct: 299 GK---DVKYTKNFLTSLPIQAKSGELSESLHFYF-GPSDYNVLKQYNDKYELTEL-IPLG 353 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WG F ++ K +F+ + F + G+ I+L T+ V+LL P+ K YVS A MK ++P+ Sbjct: 354 WGIFGWLNKWLFIPLYNFLTDYFSVGLVIILMTIIVRLLLSPIVYKSYVSQAKMKVLRPE 413 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I+E+ +K+++ P Q+ + LY +NPL+GC P LLQ+PVF A++ +R Sbjct: 414 IEEINKKYEE--PMKRQQETMALYNKAGVNPLSGCIPALLQLPVFLALFNFFPTEFGLRQ 471 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI----QMKMSPPP 511 F W DL++ D IF L +PFY HV ++P++ S+++FI M + P Sbjct: 472 KSFL-WAHDLSSYDA--IFELPFSIPFYGS---HVSLFPLLASVAIFIYSMMTMAQTAQP 525 Query: 512 ADKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 G ++ PV+ +F +++ +GL +Y+ SN+++I Sbjct: 526 QQPGMPNMKFLIYLSPVMMLFFFNNYASGLSLYYFISNLLTI 567 >gi|94967248|ref|YP_589296.1| protein translocase subunit yidC [Candidatus Koribacter versatilis Ellin345] gi|94549298|gb|ABF39222.1| protein translocase subunit yidC [Candidatus Koribacter versatilis Ellin345] Length = 583 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 91/345 (26%), Positives = 166/345 (48%), Gaps = 52/345 (15%) Query: 250 SWLGISDKYWASVFIP-----SKETSFHSQFKYLSD-----GHARYQAKFSANEITILPG 299 +W G D+Y+A++F+P + + H+ K +D + + + L G Sbjct: 250 NWAGAQDQYFAALFLPDNPPAASMVTLHNTLKIPADLDKPDPNKTQPVDVIGSAVGDLSG 309 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI-----PRFEMLIDWG-WFYFIAKPMFMLMSYF 353 ++T LF G K + + + A P ++D+G + FIAKP+F+ + + Sbjct: 310 PTVTR---LFVGPKALHILESVKSNAAPGQPNGPDLSKVVDFGKYLGFIAKPLFLWLRWT 366 Query: 354 YN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ----SPP 408 ++ V N+G +I++ TV + L+ PL S M+ IQP++ ++EK+K+ P Sbjct: 367 HDHWVPNWGWSIIILTVIINLVLLPLRLSSMKSALKMQKIQPQMKAIQEKYKKYKMNDPK 426 Query: 409 QV-LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + + M LYK H++NP+ GC P+++Q+P A Y ++++++E+R A W W+ DL+ Sbjct: 427 RADMNTEMAALYKQHSVNPVGGCLPLVIQMPFLIAFYGMLAVAIELRQA-NWFWLHDLSG 485 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP----PPADKGQAMILNWM 523 D H+ I P+++ S + +M+P PA Q M+ M Sbjct: 486 PD-------------------HLYIIPVLIVASTILMQRMTPQAGIDPAQ--QKMMTIMM 524 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH-GAEIGLI 567 P + + +GL +YW N+I QQ ++ K G EI + Sbjct: 525 PAFLGWISLRYASGLGLYWIVGNIIGFAQQFIMNKTELGREIAAV 569 >gi|207110019|ref|ZP_03244181.1| putative inner membrane protein translocase component YidC [Helicobacter pylori HPKX_438_CA4C1] Length = 136 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/129 (46%), Positives = 89/129 (68%), Gaps = 1/129 (0%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS Sbjct: 7 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQ 66 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 67 KLKELAPKMKELQEKYK-GEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 125 Query: 448 SISLEMRHA 456 ++E++ + Sbjct: 126 YNAVELKSS 134 >gi|30265504|ref|NP_847881.1| OxaA-like protein precursor [Bacillus anthracis str. Ames] gi|47778431|ref|YP_022422.2| OxaA-like protein precursor [Bacillus anthracis str. 'Ames Ancestor'] gi|49188323|ref|YP_031576.1| OxaA-like protein precursor [Bacillus anthracis str. Sterne] gi|49481123|ref|YP_039476.1| OxaA-like protein precursor [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52145294|ref|YP_086751.1| OxaA-like protein precursor [Bacillus cereus E33L] gi|65317467|ref|ZP_00390426.1| COG0706: Preprotein translocase subunit YidC [Bacillus anthracis str. A2012] gi|118480513|ref|YP_897664.1| OxaA-like protein precursor [Bacillus thuringiensis str. Al Hakam] gi|165873027|ref|ZP_02217648.1| stage III sporulation protein J [Bacillus anthracis str. A0488] gi|167635063|ref|ZP_02393380.1| stage III sporulation protein J [Bacillus anthracis str. A0442] gi|167641749|ref|ZP_02399992.1| stage III sporulation protein J [Bacillus anthracis str. A0193] gi|170689464|ref|ZP_02880654.1| stage III sporulation protein J [Bacillus anthracis str. A0465] gi|170707538|ref|ZP_02897991.1| stage III sporulation protein J [Bacillus anthracis str. A0389] gi|177655281|ref|ZP_02936835.1| stage III sporulation protein J [Bacillus anthracis str. A0174] gi|190569283|ref|ZP_03022177.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I] gi|196036094|ref|ZP_03103494.1| stage III sporulation protein J [Bacillus cereus W] gi|196041960|ref|ZP_03109247.1| stage III sporulation protein J [Bacillus cereus NVH0597-99] gi|196045495|ref|ZP_03112726.1| stage III sporulation protein J [Bacillus cereus 03BB108] gi|218906678|ref|YP_002454512.1| stage III sporulation protein J [Bacillus cereus AH820] gi|227818255|ref|YP_002818264.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684] gi|228918098|ref|ZP_04081626.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930492|ref|ZP_04093492.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936766|ref|ZP_04099557.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229124989|ref|ZP_04254163.1| Membrane protein oxaA 1 [Bacillus cereus 95/8201] gi|229187715|ref|ZP_04314851.1| Membrane protein oxaA 1 [Bacillus cereus BGSC 6E1] gi|229601905|ref|YP_002869695.1| stage III sporulation protein J [Bacillus anthracis str. A0248] gi|254687073|ref|ZP_05150931.1| OxaA-like protein precursor [Bacillus anthracis str. CNEVA-9066] gi|254735161|ref|ZP_05192871.1| OxaA-like protein precursor [Bacillus anthracis str. Western North America USA6153] gi|254742130|ref|ZP_05199817.1| OxaA-like protein precursor [Bacillus anthracis str. Kruger B] gi|254755960|ref|ZP_05207992.1| OxaA-like protein precursor [Bacillus anthracis str. Vollum] gi|254761360|ref|ZP_05213382.1| OxaA-like protein precursor [Bacillus anthracis str. Australia 94] gi|38502943|sp|Q81JH1|OXAA1_BACAN RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|30260182|gb|AAP29367.1| stage III sporulation protein J [Bacillus anthracis str. Ames] gi|47552136|gb|AAT34897.2| stage III sporulation protein J [Bacillus anthracis str. 'Ames Ancestor'] gi|49182250|gb|AAT57626.1| stage III sporulation protein J [Bacillus anthracis str. Sterne] gi|49332679|gb|AAT63325.1| stage III sporulation protein J [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978763|gb|AAU20313.1| stage III sporulation protein J [Bacillus cereus E33L] gi|118419738|gb|ABK88157.1| protein translocase subunit yidC [Bacillus thuringiensis str. Al Hakam] gi|164711239|gb|EDR16795.1| stage III sporulation protein J [Bacillus anthracis str. A0488] gi|167510303|gb|EDR85706.1| stage III sporulation protein J [Bacillus anthracis str. A0193] gi|167529537|gb|EDR92287.1| stage III sporulation protein J [Bacillus anthracis str. A0442] gi|170127534|gb|EDS96408.1| stage III sporulation protein J [Bacillus anthracis str. A0389] gi|170666566|gb|EDT17339.1| stage III sporulation protein J [Bacillus anthracis str. A0465] gi|172080208|gb|EDT65300.1| stage III sporulation protein J [Bacillus anthracis str. A0174] gi|190559590|gb|EDV13581.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I] gi|195991261|gb|EDX55229.1| stage III sporulation protein J [Bacillus cereus W] gi|196023702|gb|EDX62378.1| stage III sporulation protein J [Bacillus cereus 03BB108] gi|196027215|gb|EDX65835.1| stage III sporulation protein J [Bacillus cereus NVH0597-99] gi|218536479|gb|ACK88877.1| stage III sporulation protein J [Bacillus cereus AH820] gi|227003597|gb|ACP13340.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684] gi|228595783|gb|EEK53467.1| Membrane protein oxaA 1 [Bacillus cereus BGSC 6E1] gi|228658490|gb|EEL14156.1| Membrane protein oxaA 1 [Bacillus cereus 95/8201] gi|228822975|gb|EEM68816.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829211|gb|EEM74848.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841578|gb|EEM86694.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266313|gb|ACQ47950.1| stage III sporulation protein J [Bacillus anthracis str. A0248] Length = 255 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF---DLGQAD-----------PYY--------ILPVVAAITTFIQQKLA-MAG 192 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM+L MP++ + +FPA L +YW N+ I Q +I G EI Sbjct: 193 TAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLI---KGPEI 245 >gi|222098963|ref|YP_002533021.1| oxaa-like protein precursor [Bacillus cereus Q1] gi|221243022|gb|ACM15732.1| stage III sporulation protein J [Bacillus cereus Q1] Length = 246 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 146 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD PFY I P++ +++ FIQ K++ Sbjct: 147 SKHTFLW---FDLGQAD-----------PFY--------ILPVVAAITTFIQQKLA-MAG 183 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM++ MP++ + +FPA L +YW N+ I Q +I G EI Sbjct: 184 TAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLI---KGPEI 236 >gi|332885946|gb|EGK06190.1| hypothetical protein HMPREF9456_00064 [Dysgonomonas mossii DSM 22836] Length = 650 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 135/540 (25%), Positives = 245/540 (45%), Gaps = 85/540 (15%) Query: 52 SYAAVLIDDRAQALSMSPR--VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 S + V + D + P + L+N L + + KG + + L+ Y +S N Sbjct: 79 SDSTVAVTDSLPSAEQKPEQFITLENSKLKATFSTKGGRMVRVQLKDY---MSYNRD--- 132 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 NT + Y + + A+ L + L +GK++ TPI+ K +N L Sbjct: 133 --DKKNTDSLYL----FNNDADFTLLLTNKQQKVLSTGKLIF--TPIQ---KEGDNSLIM 181 Query: 170 RTISLDEHYL---FKIVD------------------TVTNNSIDQIRFSPRGRIMRHKPQ 208 R D Y+ +K+ D T + + ++++S R MR + + Sbjct: 182 RYAYSDSQYIDFVYKLADDDYMMKYDINMVGMQPMLARTYSDVFEMKWSQR---MRRQEK 238 Query: 209 TATNTFGVQE-GFIAVLGD-KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 + N + V GD K + K ++E E W+ ++++A + I Sbjct: 239 SVKNEQRYSHLTYKYVGGDVKEMSSDKNEEVE------VKEPAKWIAFKNQFFAPILIAD 292 Query: 267 K--ETSFHSQFKYLSDGHARYQAKFSAN-EITILPG---KSITTTNFLFAGAKEFPTIHH 320 ET+ + +D ++ Y F A + PG +SIT + G + + + Sbjct: 293 DKIETALLNSKVLQTDENSEYLKSFEATLYVPAKPGSAPESITAGFSYYLGPMSYSLLKN 352 Query: 321 YEKDLAIPRFEMLID------WGWF-----YFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 Y+ ++ E+ +D W F YFI P+F L+S N + GI I+L T+ Sbjct: 353 YDSNVKDANKELDLDKLVPLGWTLFRWVNQYFIV-PIFNLLS---NTGLSMGIVILLLTI 408 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLA 428 VKL+ PL K ++S+A M+ ++P+++E+ EK+ KQ Q+A + LY +NP++ Sbjct: 409 IVKLVISPLTYKSFMSSAKMRVLRPQVEEINEKYPKQEQAMEKQQATMALYSKAGVNPMS 468 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+LLQ+P+ A++ ++E+R F W DL+ D IF +P L G Sbjct: 469 GCVPMLLQMPILIALFSFFPNAIELRQQSFL-WATDLSTYDA--IFEWKNHIP--LIG-T 522 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMI--LNW----MPVVFVFALSSFPAGLIIYW 542 H+ ++ I+M+++ + K + + GQ + + W MP++F+F L+ +P+GL Y+ Sbjct: 523 HISLFCILMTITNIVYTKFNMEMTNTGQQQMPGMKWMMYLMPLIFLFMLNDYPSGLTYYY 582 >gi|229199690|ref|ZP_04326333.1| Membrane protein oxaA 1 [Bacillus cereus m1293] gi|228583785|gb|EEK41960.1| Membrane protein oxaA 1 [Bacillus cereus m1293] Length = 255 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD PFY I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF---DLGQAD-----------PFY--------ILPVVAAITTFIQQKLA-MAG 192 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM++ MP++ + +FPA L +YW N+ I Q +I G EI Sbjct: 193 TAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLI---KGPEI 245 >gi|153806660|ref|ZP_01959328.1| hypothetical protein BACCAC_00930 [Bacteroides caccae ATCC 43185] gi|149131337|gb|EDM22543.1| hypothetical protein BACCAC_00930 [Bacteroides caccae ATCC 43185] Length = 617 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 89/318 (27%), Positives = 165/318 (51%), Gaps = 27/318 (8%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL--PGKSITTTNF 307 W+ +++++SVFI ++ S + + Y +SA T GK T +F Sbjct: 254 DWVAFKNQFFSSVFIAEQDFDKVSVKSRMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMHF 313 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVG---NFGI 362 F G F T+ +K ++E+ L+ GW F+ ++ F L G + GI Sbjct: 314 YF-GPNHFKTLKALDKG-RTEKWELHRLVYLGWPLIRWINQFITINVFDWLSGWGLSMGI 371 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKT 421 +++ T+ VK++ +P K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY Sbjct: 372 VLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKIDEINKKYPKQEDAMKKQQEVMGLYSQ 431 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + ++P+ GC P+LLQ P+ A++ + ++E+R F W DL+ D F P Sbjct: 432 YGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDA------FITFP 484 Query: 482 FYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFVFALS 532 F++P F+ H+ ++ ++M+++ + K + D G Q + W MP++F+F L+ Sbjct: 485 FHIP-FLGNHLSLFCLLMTVTNILNTKYTMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLN 543 Query: 533 SFPAGLIIYWSWSNVISI 550 +P+GL Y+ S +IS+ Sbjct: 544 DYPSGLNYYYFVSTLISV 561 >gi|225867467|ref|YP_002752845.1| stage III sporulation protein J [Bacillus cereus 03BB102] gi|225786803|gb|ACO27020.1| stage III sporulation protein J [Bacillus cereus 03BB102] Length = 255 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF---DLGQAD-----------PYY--------ILPVVAAITTFIQQKLA-MAG 192 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM+L MP++ + +FPA L +YW N+ I Q +I G EI Sbjct: 193 TAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLI---KGPEI 245 >gi|229094597|ref|ZP_04225664.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-42] gi|228688844|gb|EEL42675.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-42] Length = 246 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 146 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I P++ +++ FIQ K++ Sbjct: 147 SKHTFLW---FDLGQAD-----------PYY--------ILPVVAAITTFIQQKLA-MAG 183 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM+L MP++ + +FPA L +YW N+ I Q +I G EI Sbjct: 184 TAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLI---KGPEI 236 >gi|229035144|ref|ZP_04189090.1| Membrane protein oxaA 1 [Bacillus cereus AH1271] gi|228728210|gb|EEL79240.1| Membrane protein oxaA 1 [Bacillus cereus AH1271] Length = 255 Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/237 (35%), Positives = 132/237 (55%), Gaps = 37/237 (15%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTAEI 155 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I P++ +++ FIQ K++ Sbjct: 156 SKHTFLW---FDLGQAD-----------PYY--------ILPVVAAITTFIQQKLA-MAG 192 Query: 513 DKGQ----AMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM++ MP+ + VFA+ +FPA L +YW N+ I Q +I G EI Sbjct: 193 TAGQNPQMAMMIWLMPIMILVFAI-NFPAALSLYWVVGNIFGIAQMYLI---KGPEI 245 >gi|134301155|ref|YP_001114651.1| 60 kDa inner membrane insertion protein [Desulfotomaculum reducens MI-1] gi|134053855|gb|ABO51826.1| protein translocase subunit yidC [Desulfotomaculum reducens MI-1] Length = 229 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 128/230 (55%), Gaps = 30/230 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFG-----IAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 GWF I M LM++ Y +FG +AI+L T+F+K++ +PL+KKQ S M+ Sbjct: 3 GWFDAIVDGMTALMNWLYGFTVSFGFPSYALAIILLTIFIKVVLYPLSKKQMHSMVMMQK 62 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P+I +++K+K PQ++Q+ +++LYK HN+NP+AGC P+L+Q+P+ A+Y+ + + Sbjct: 63 LAPEIKAIQDKYKNKDPQMMQQKIMELYKEHNVNPMAGCLPLLVQMPILIALYRAL-YAF 121 Query: 452 EMR---HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + HA F+ W++ L+ G +P L + + + ++Q K++ Sbjct: 122 PFKNPDHAHFF-WVESLSKT---------GDIPLAL-----------LAAATTYLQSKLT 160 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D+ Q +L MP+ + + PAGL +YW N + +QQ +I K Sbjct: 161 TNTQDQTQKTMLYTMPLFIGWIAHTVPAGLALYWVVFNTVGAIQQWIINK 210 >gi|29345999|ref|NP_809502.1| putative inner membrane protein translocase component YidC [Bacteroides thetaiotaomicron VPI-5482] gi|253568600|ref|ZP_04846011.1| inner membrane protein oxaA [Bacteroides sp. 1_1_6] gi|298387394|ref|ZP_06996947.1| inner membrane protein OxaA [Bacteroides sp. 1_1_14] gi|38502986|sp|Q8AA76|OXAA_BACTN RecName: Full=Inner membrane protein oxaA gi|29337893|gb|AAO75696.1| conserved hypothetical protein [Bacteroides thetaiotaomicron VPI-5482] gi|251842673|gb|EES70753.1| inner membrane protein oxaA [Bacteroides sp. 1_1_6] gi|298260063|gb|EFI02934.1| inner membrane protein OxaA [Bacteroides sp. 1_1_14] Length = 618 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 90/326 (27%), Positives = 168/326 (51%), Gaps = 27/326 (8%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL--PGKSITTTNF 307 W+ +++++SVFI ++ + S + + Y +SA T GK T F Sbjct: 255 DWVAFKNQFFSSVFIADQDFNKVSVKSRMEQQGSGYIKDYSAEMSTFFDPSGKQPTEMYF 314 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVG---NFGI 362 F G F T+ +K ++E+ L+ GW F+ ++ F L G + GI Sbjct: 315 YF-GPNHFKTLKALDKG-RTEKWELNRLVYLGWPLIRWINQFITINVFDWLSGWGLSMGI 372 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKT 421 +++ T+ VK++ +P K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY Sbjct: 373 VLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKIDEINKKYPKQEDAMKKQQEVMSLYSQ 432 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + ++P+ GC P+LLQ P+ A++ + ++E+R F W DL+ D F P Sbjct: 433 YGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDA------FITFP 485 Query: 482 FYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFVFALS 532 F++P F+ H+ ++ ++M+++ + K + D G Q + W MP++F+F L+ Sbjct: 486 FHIP-FLGNHLSLFCLLMTVTNILNTKYTMTMQDTGAQPQMAAMKWMMYLMPIMFLFVLN 544 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558 +P+GL Y+ S +IS+ ++ K Sbjct: 545 DYPSGLNYYYFVSTLISVGTMILLRK 570 >gi|229176162|ref|ZP_04303654.1| Membrane protein oxaA 1 [Bacillus cereus MM3] gi|228607321|gb|EEK64651.1| Membrane protein oxaA 1 [Bacillus cereus MM3] Length = 246 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/237 (35%), Positives = 132/237 (55%), Gaps = 37/237 (15%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTAEI 146 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I P++ +++ FIQ K++ Sbjct: 147 SKHTFLW---FDLGQAD-----------PYY--------ILPVVAAITTFIQQKLA-MAG 183 Query: 513 DKGQ----AMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM++ MP+ + VFA+ +FPA L +YW N+ I Q +I G EI Sbjct: 184 TAGQNPQMAMMIWLMPIMILVFAI-NFPAALSLYWVVGNIFGIAQMYLI---KGPEI 236 >gi|319902327|ref|YP_004162055.1| protein translocase subunit yidC [Bacteroides helcogenes P 36-108] gi|319417358|gb|ADV44469.1| protein translocase subunit yidC [Bacteroides helcogenes P 36-108] Length = 615 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 98/349 (28%), Positives = 175/349 (50%), Gaps = 40/349 (11%) Query: 247 ESNSWLGISDKYWASVFIPS---KETSFHSQFK-----YLSDGHARYQAKFSANEITILP 298 E W+ +++++SVF+ ++T S+ + Y+ D A KF Sbjct: 250 EHLDWIAFKNQFFSSVFLADADFEKTKLVSKMEPQGSGYIKDYSAEMSTKFDPT------ 303 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNL 356 GK T F F G + T+ +K ++E+ L+ GW + ++ F L Sbjct: 304 GKEATQLYFYF-GPNHYKTLTALDKGRE-EKWELNRLVYLGWPIVRQINQWFTINIFDWL 361 Query: 357 VG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQ 412 G GI ++L T+ VK++ FP K Y+S+A M+ ++PKIDE+ +K+ KQ Q Sbjct: 362 SGWGLGMGIVLLLMTLIVKVVVFPATWKTYMSSAKMRVLKPKIDEINKKYPKQEDAMKKQ 421 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R F W DL+ D Sbjct: 422 QEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDA-- 478 Query: 473 IFTLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----M 523 F PF++P F+ H+ ++ ++M+++ + K D G Q + W M Sbjct: 479 ----FINFPFHIP-FLGSHLSLFCLLMTVTNILNTKYMMQQQDTGANPQMAAMKWMSYLM 533 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 PV+F+F L+ +P+GL Y+ S +IS+V +IM+ E L+ +L S Sbjct: 534 PVMFLFILNDYPSGLNYYYFISTLISVV-TTIIMRKTTNEEKLLAQLES 581 >gi|284036928|ref|YP_003386858.1| membrane protein insertase [Spirosoma linguale DSM 74] gi|283816221|gb|ADB38059.1| membrane protein insertase, YidC/Oxa1 family [Spirosoma linguale DSM 74] Length = 621 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 93/361 (25%), Positives = 173/361 (47%), Gaps = 38/361 (10%) Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 +K ++ E + + E W I KY+ S F+ + FK L + K + Sbjct: 240 EKLTEGESNQEATVEEPVQWFTIKHKYFLSGFVARNSPLTKANFKALVNPADSSVVKTAI 299 Query: 292 NEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW--------FYF 341 ++T I K+ LF G +F + P F+ + G+ ++F Sbjct: 300 ADVTLPIADVKAGKGQYKLFYGPNDFQLLGS-----VAPEFDQNVYLGYSILKPINKYFF 354 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + P+F + F + N+G+ I+ VFVKL+ PL K Y+S A M+ +QP+++E++E Sbjct: 355 V--PVFNFLEKF---IANYGLLIIALVVFVKLILTPLTYKSYISMAKMRVLQPELNEMKE 409 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + + Q ++LY+ ++PL+GC P+L +P+ F+++ + +E+R F W Sbjct: 410 RVGDDMAK-QQSEQMKLYQEVGVSPLSGCVPVLATMPILFSLFMLFPNLIELRQKSFL-W 467 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS----MFIQMKMSPP-PADKGQ 516 DL+ D F F LPF H+ ++ ++M++S + + +P P Sbjct: 468 ANDLSTYD---AFITFPTLPFI---GSHLSLFTVLMTISSIAYAYYNNQTTPTQPGPVNM 521 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + P++F+F L+S+PAGL Y+ SNV++I QQ +I + D++++ + Sbjct: 522 KAMSYVFPLMFMFVLNSYPAGLTFYYFVSNVVTIAQQQLIRRFVDE-----DKIKAVLDE 576 Query: 577 N 577 N Sbjct: 577 N 577 >gi|320109423|ref|YP_004185013.1| membrane protein insertase, YidC/Oxa1 family [Terriglobus saanensis SP1PR4] gi|319927944|gb|ADV85019.1| membrane protein insertase, YidC/Oxa1 family [Terriglobus saanensis SP1PR4] Length = 597 Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 116/442 (26%), Positives = 196/442 (44%), Gaps = 68/442 (15%) Query: 145 ISGKILTPTTPIKLVFK-NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFS---PRG 200 ++GK+ P T L F +AN + +T DE YL D V + +R P G Sbjct: 166 VTGKLTAPQT---LSFTYSANGLDVTKTFRFDESYLLH-ADVVASRDGSPVRALIAWPGG 221 Query: 201 RIMRHKPQTATNTFGVQEGFIAVLGDK--SLVEQKYSDIEKSSISNFHESNS---WLGIS 255 FG Q+ + G + S E K + + +S + ++G+ Sbjct: 222 -------------FGDQDQVLDYNGSQLESSSEGKTDHVNFAKVSGGKTLDGPLDYVGVV 268 Query: 256 DKYWASVFIP-----SKETSFHSQF------KYLSDGHARYQAKFSANEI--TILPGKSI 302 D+++ +VFIP + S H + + K + I T L S Sbjct: 269 DQFFGAVFIPDNPQTATAVSLHQTIDVEKLKRSTAITSTTPTGKIATVPIIGTALGDVSG 328 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFG 361 T ++AG K + TI H ++D+G+F + KP+F + + V N+G Sbjct: 329 HTQARIYAGPKSY-TILHTVSTTGGETLAPIVDFGFFGIVGKPLFFALHFVQEHVASNWG 387 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE---KFKQSPPQV--LQKAMI 416 AI++ T+ + L+ PL S M+ +QP++D ++ K+K + P+ + ++ Sbjct: 388 WAIVVFTILINLVLLPLRILSMKSALKMQRLQPQMDAIKARYAKYKVTDPKRADMNAEIM 447 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 QL K + +N GC P L+Q+P+ A++ ++ +E+R A W W+ DL AADP +I Sbjct: 448 QLQKDNGVNMFGGCIPTLIQLPLLIAMFSMLQKVVELRQA-HWFWLHDLTAADPYHIL-- 504 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMF-IQMKMSPPPAD-KGQAMILNWMPVVFVFALSSF 534 PI+M +S F +Q M P D + Q M+ MP + ++ Sbjct: 505 -----------------PIVMVVSQFLVQFYMPSPGVDPQQQKMMAFMMPAFSGYMTWNY 547 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 +GL +YW N+I IVQQ V+ Sbjct: 548 SSGLALYWCIGNLIMIVQQYVM 569 >gi|261416142|ref|YP_003249825.1| membrane protein insertase, YidC/Oxa1 family [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372598|gb|ACX75343.1| membrane protein insertase, YidC/Oxa1 family [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327500|gb|ADL26701.1| inner membrane protein, 60 kDa [Fibrobacter succinogenes subsp. succinogenes S85] Length = 616 Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 76/227 (33%), Positives = 130/227 (57%), Gaps = 22/227 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WF +I K + L++ FY+++ N+G+AI+L T+ V+ + P KQ ST M ++P++D Sbjct: 366 WFVWICKMLLKLLNLFYSIIPNYGVAIILVTLIVRGVTTPFTVKQIKSTRGMAALKPQLD 425 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLA----GCWPILLQIPVFFAIYKVISISLEM 453 E+ K++ + PQ Q AM++LY +NINPLA GC P+L+Q+P+F ++ V+ ++E+ Sbjct: 426 EINVKYR-TDPQKKQAAMMELYSKNNINPLASCTGGCLPMLIQMPIFMGLFFVLGRAIEL 484 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGI-LPFYLPGFMHVGIWPIIMSLSMFIQMKMS---- 508 R AP + WI DL+ +D GI +P +P + I P +M + + Q K++ Sbjct: 485 RGAPAFLWISDLSRSD----VVWNGISIPIIMPS--GLAILPWLMVATTYFQTKVTMGAN 538 Query: 509 ---PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K ++ M ++F + P+GL++YW N+ SI Q Sbjct: 539 AGMDPAQQKMMVWMMPAMMLLFSAVM---PSGLVLYWIIGNIWSIAQ 582 >gi|299146179|ref|ZP_07039247.1| inner membrane protein OxaA [Bacteroides sp. 3_1_23] gi|298516670|gb|EFI40551.1| inner membrane protein OxaA [Bacteroides sp. 3_1_23] Length = 617 Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 90/318 (28%), Positives = 164/318 (51%), Gaps = 27/318 (8%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL--PGKSITTTNF 307 W+ +++++SVFI ++ S + + Y +SA T GK T F Sbjct: 254 DWIAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMYF 313 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVG---NFGI 362 F G F T+ +K ++E+ L+ GW F+ ++ F L G + GI Sbjct: 314 YF-GPNHFKTLKALDKGRD-EKWELHRLVYLGWPLIRWINQFITINVFDWLSGWGLSMGI 371 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKT 421 +++ T+ VK+L +P K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY Sbjct: 372 VLLILTIMVKVLVYPATWKTYMSSAKMRVLKPKIDEINKKYPKQEDAMKKQQEVMGLYSQ 431 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + ++P+ GC P+LLQ P+ A++ + ++E+R F W DL+ D F P Sbjct: 432 YGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDA------FITFP 484 Query: 482 FYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFVFALS 532 F++P F+ H+ ++ ++M+++ + K + D G Q + W MP++F+F L+ Sbjct: 485 FHIP-FLGNHLSLFCLLMTVTNILNTKYTMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLN 543 Query: 533 SFPAGLIIYWSWSNVISI 550 +P+GL Y+ S +IS+ Sbjct: 544 DYPSGLNYYYFVSTLISV 561 >gi|206975771|ref|ZP_03236682.1| stage III sporulation protein J [Bacillus cereus H3081.97] gi|217962978|ref|YP_002341556.1| OxaA-like protein precursor [Bacillus cereus AH187] gi|229159046|ref|ZP_04287102.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 4342] gi|206745865|gb|EDZ57261.1| stage III sporulation protein J [Bacillus cereus H3081.97] gi|217067037|gb|ACJ81287.1| stage III sporulation protein J [Bacillus cereus AH187] gi|228624465|gb|EEK81236.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 4342] gi|324329437|gb|ADY24697.1| OxaA-like protein precursor [Bacillus thuringiensis serovar finitimus YBT-020] Length = 255 Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 81/236 (34%), Positives = 127/236 (53%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL ADP I P++ +++ FIQ K++ Sbjct: 156 SKHTFLW---FDLGQADPLYIL-------------------PVVAAITTFIQQKLA-MAG 192 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM++ MP++ + +FPA L +YW N+ I Q +I G EI Sbjct: 193 TAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLI---KGPEI 245 >gi|228988715|ref|ZP_04148800.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771027|gb|EEM19508.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 255 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 82/236 (34%), Positives = 129/236 (54%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF---DLGQAD-----------PYY--------ILPVVAAITTFIQQKLA-MAG 192 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM++ MP++ + +FPA L +YW N+ I Q +I G EI Sbjct: 193 TAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLI---KGPEI 245 >gi|218232510|ref|YP_002370261.1| OxaA-like protein precursor [Bacillus cereus B4264] gi|228924231|ref|ZP_04087502.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228961750|ref|ZP_04123353.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229051155|ref|ZP_04194699.1| Membrane protein oxaA 1 [Bacillus cereus AH676] gi|229112899|ref|ZP_04242430.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-15] gi|229148036|ref|ZP_04276375.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST24] gi|229153645|ref|ZP_04281821.1| Membrane protein oxaA 1 [Bacillus cereus m1550] gi|296505914|ref|YP_003667614.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171] gi|218160467|gb|ACK60459.1| stage III sporulation protein J [Bacillus cereus B4264] gi|228629831|gb|EEK86484.1| Membrane protein oxaA 1 [Bacillus cereus m1550] gi|228635461|gb|EEK91952.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST24] gi|228670578|gb|EEL25891.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-15] gi|228722218|gb|EEL73619.1| Membrane protein oxaA 1 [Bacillus cereus AH676] gi|228797944|gb|EEM44954.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228835449|gb|EEM80819.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296326966|gb|ADH09894.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171] Length = 258 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 79/223 (35%), Positives = 123/223 (55%), Gaps = 30/223 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFNSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFIQMPILFAFYHAIMRTAEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W DL AD PFY I P++ +++ FIQ K++ Sbjct: 156 KQHSFL-WF-DLGHAD-----------PFY--------ILPVVAAITTFIQQKLA-MAGT 193 Query: 514 KGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 GQ AM+L MP++ + +FPA L +YW N+ I Q Sbjct: 194 AGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQ 236 >gi|229142235|ref|ZP_04270759.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST26] gi|228641253|gb|EEK97560.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST26] Length = 246 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 81/236 (34%), Positives = 127/236 (53%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 146 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL ADP I P++ +++ FIQ K++ Sbjct: 147 SKHTFLW---FDLGQADPLYIL-------------------PVVAAITTFIQQKLA-MAG 183 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM++ MP++ + +FPA L +YW N+ I Q +I G EI Sbjct: 184 TAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLI---KGPEI 236 >gi|255691546|ref|ZP_05415221.1| inner membrane protein OxaA [Bacteroides finegoldii DSM 17565] gi|260622938|gb|EEX45809.1| inner membrane protein OxaA [Bacteroides finegoldii DSM 17565] Length = 617 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 89/318 (27%), Positives = 164/318 (51%), Gaps = 27/318 (8%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL--PGKSITTTNF 307 W+ +++++SVFI ++ S + + Y +SA T GK T F Sbjct: 254 DWVAFKNQFFSSVFIAEQDFDKVSVKSRMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMYF 313 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVG---NFGI 362 F G F T+ +K ++E+ L+ GW F+ ++ F L G + GI Sbjct: 314 YF-GPNHFKTLKALDKGRD-EKWELNRLVYLGWPLIRWINQFITINVFDWLSGWGLSMGI 371 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKT 421 +++ T+ VK++ +P K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY Sbjct: 372 VLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKIDEINKKYPKQEDAMKKQQEVMSLYSQ 431 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + ++P+ GC P+LLQ P+ A++ + ++E+R F W DL+ D F P Sbjct: 432 YGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDAIITF------P 484 Query: 482 FYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFVFALS 532 F++P F+ H+ ++ ++M+++ + K + D G Q + W MP++F+F L+ Sbjct: 485 FHIP-FLGNHLSLFCLLMTVTNILNTKYTMSMQDNGAQPQMAAMKWMMYLMPIMFLFVLN 543 Query: 533 SFPAGLIIYWSWSNVISI 550 +P+GL Y+ S +IS+ Sbjct: 544 DYPSGLNYYYFVSTLISV 561 >gi|47568685|ref|ZP_00239382.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus G9241] gi|47554673|gb|EAL13027.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus G9241] Length = 246 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 82/236 (34%), Positives = 129/236 (54%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 146 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I P++ +++ FIQ K++ Sbjct: 147 SKHTFLW---FDLGQAD-----------PYY--------ILPVVAAITTFIQQKLA-MAG 183 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM++ MP++ + +FPA L +YW N+ I Q +I G EI Sbjct: 184 TAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLI---KGPEI 236 >gi|317476267|ref|ZP_07935517.1| YidC/Oxa1 family membrane protein insertase [Bacteroides eggerthii 1_2_48FAA] gi|316907541|gb|EFV29245.1| YidC/Oxa1 family membrane protein insertase [Bacteroides eggerthii 1_2_48FAA] Length = 615 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 112/436 (25%), Positives = 208/436 (47%), Gaps = 54/436 (12%) Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTV-------TNNSIDQIRFSPRGRIMRH 205 T ++L +A+ I F+ ++ D + + +D V + +D I +S R R + Sbjct: 156 TATMRLSADSASYIDFKYSMHNDTYLVDFTIDAVGMANKLASTKYVD-IEWSQRARQI-E 213 Query: 206 KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP 265 K T N + E + GD + Y K+ E W+ +++++SVF+ Sbjct: 214 KGYTYENR--LSELTYKITGDGT----DYLSAGKNDEKEVAERLDWIAFKNQFFSSVFLA 267 Query: 266 S---KETSFHSQFKYLSDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHY 321 ++T S+ + G+ + +SA T+ P TT F + G + T+ Sbjct: 268 DADFEKTKLSSKMETQGSGYIK---DYSAEMSTVFDPTGEKTTQLFFYFGPNHYKTLTAL 324 Query: 322 EKDLAIPRFEM---------LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 +K ++E+ LI W +F L S+ ++ GI ++L T+ VK Sbjct: 325 DKG-RTEKWELNRLVYLGWPLIRWINKWFTINIFDWLSSWGLSM----GIVLLLMTLIVK 379 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCW 431 + FP K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC Sbjct: 380 AVVFPATWKTYISSAKMRVLKPKIDEIGKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCL 439 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM--H 489 P+L+Q P+ A++ + ++E+R F W DL+ D F PF++P F+ H Sbjct: 440 PMLIQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDA------FINFPFHIP-FLGSH 491 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFVFALSSFPAGLIIYW 542 + ++ ++M+++ + K D G Q + W MPV+F+F L+ +P+GL Y+ Sbjct: 492 LSLFCLLMTVTNILNTKFMMQQQDTGANPQMAAMKWMSYLMPVMFLFILNDYPSGLNYYY 551 Query: 543 SWSNVISIVQQAVIMK 558 S +IS+V ++ K Sbjct: 552 FISTLISVVTTLIMRK 567 >gi|260174448|ref|ZP_05760860.1| putative inner membrane protein translocase component YidC [Bacteroides sp. D2] gi|315922715|ref|ZP_07918955.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696590|gb|EFS33425.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 617 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 89/318 (27%), Positives = 165/318 (51%), Gaps = 27/318 (8%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP--GKSITTTNF 307 W+ +++++SVFI ++ S + + Y +SA T GK T F Sbjct: 254 DWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGSGYIKDYSAEMNTFFDPTGKEPTEMYF 313 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVG---NFGI 362 F G F T+ +K+ ++E+ L+ GW F+ ++ F L G + GI Sbjct: 314 YF-GPNHFKTLKALDKERD-EKWELHRLVYLGWPLIRWINQFITINVFDWLSGWGLSMGI 371 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKT 421 +++ T+ VK++ +P K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY Sbjct: 372 VLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKIDEINKKYPKQEDAMKKQQEVMGLYSQ 431 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + ++P+ GC P+LLQ P+ A++ + ++E+R F W DL+ D F P Sbjct: 432 YGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDA------FITFP 484 Query: 482 FYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFVFALS 532 F++P F+ H+ ++ ++M+++ + K + D G Q + W MP++F+F L+ Sbjct: 485 FHIP-FLGNHLSLFCLLMTVTNILNTKYTMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLN 543 Query: 533 SFPAGLIIYWSWSNVISI 550 +P+GL Y+ S +IS+ Sbjct: 544 DYPSGLNYYYFVSTLISV 561 >gi|218130954|ref|ZP_03459758.1| hypothetical protein BACEGG_02556 [Bacteroides eggerthii DSM 20697] gi|217986826|gb|EEC53158.1| hypothetical protein BACEGG_02556 [Bacteroides eggerthii DSM 20697] Length = 615 Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 112/436 (25%), Positives = 208/436 (47%), Gaps = 54/436 (12%) Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTV-------TNNSIDQIRFSPRGRIMRH 205 T ++L +A+ I F+ ++ D + + +D V + +D I +S R R + Sbjct: 156 TVTMRLSADSASYIDFKYSMHNDTYLVDFTIDAVGMANKLASTKYVD-IEWSQRARQI-E 213 Query: 206 KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP 265 K T N + E + GD + Y K+ E W+ +++++SVF+ Sbjct: 214 KGYTYENR--LSELTYKITGDGT----DYLSAGKNDEKEVAERLDWIAFKNQFFSSVFLA 267 Query: 266 S---KETSFHSQFKYLSDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHY 321 ++T S+ + G+ + +SA T+ P TT F + G + T+ Sbjct: 268 DADFEKTKLSSKMETQGSGYIK---DYSAEMSTVFDPTGEKTTQLFFYFGPNHYKTLTAL 324 Query: 322 EKDLAIPRFEM---------LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 +K ++E+ LI W +F L S+ ++ GI ++L T+ VK Sbjct: 325 DKG-RTEKWELNRLVYLGWPLIRWINKWFTINIFDWLSSWGLSM----GIVLLLMTLIVK 379 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCW 431 + FP K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC Sbjct: 380 AVVFPATWKTYISSAKMRVLKPKIDEIGKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCL 439 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM--H 489 P+L+Q P+ A++ + ++E+R F W DL+ D F PF++P F+ H Sbjct: 440 PMLIQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDA------FINFPFHIP-FLGSH 491 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFVFALSSFPAGLIIYW 542 + ++ ++M+++ + K D G Q + W MPV+F+F L+ +P+GL Y+ Sbjct: 492 LSLFCLLMTVTNILNTKFMMQQQDTGANPQMAAMKWMSYLMPVMFLFILNDYPSGLNYYY 551 Query: 543 SWSNVISIVQQAVIMK 558 S +IS+V ++ K Sbjct: 552 FISTLISVVTTLIMRK 567 >gi|91215968|ref|ZP_01252937.1| putative inner membrane protein translocase component YidC [Psychroflexus torquis ATCC 700755] gi|91185945|gb|EAS72319.1| putative inner membrane protein translocase component YidC [Psychroflexus torquis ATCC 700755] Length = 636 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 89/324 (27%), Positives = 166/324 (51%), Gaps = 31/324 (9%) Query: 246 HESNSWLGISDKYWASVFIPSK--ETSFHSQFKYLSDGHARYQAKFSANEITILP----- 298 ES W+ ++ SV + E + + D + F+ N + +P Sbjct: 268 DESIDWIAFKQHFFTSVLLTDTPFEKGKMTSLNLVQD--EQIDTVFTKNFLAEVPLKLNN 325 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEK--DLAIPRFEMLIDWGWFYFIAKPMFM-LMSYFYN 355 G+ T N+ + G +F + YE+ D +P + WG F +I + +F+ + + Sbjct: 326 GEFSETMNW-YHGPSDFDVLSSYERKLDEIVP-----LGWGLFGWINRYIFIPFFGFLSS 379 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 + ++G+AI++ T+ V+++ P+ K YVS A MK ++P+I+E+ EKFK + + Q+ M Sbjct: 380 SLPSYGLAIIVMTIVVRIVLSPITYKSYVSQAKMKVLKPEINEINEKFKDNAMKKQQETM 439 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +LY ++PLAGC P LLQIPVF+A+++ + ++R F W DL++ D IF Sbjct: 440 -KLYSKTGVSPLAGCIPALLQIPVFYALFQFFPSAFDLRQKGFL-WADDLSSYDV--IFE 495 Query: 476 LFGILPFYLPGFM-HVGIWPIIMSLSMFI--------QMKMSPPPADKGQAMILNWMPVV 526 +P + HV ++PI+ S+++F M+ S P +I+ + P + Sbjct: 496 WDAYIPLVSFAYGNHVSLFPILASIAIFFYTQMTAGQNMQQSSQPGMPNMKVIMYFAPFI 555 Query: 527 FVFALSSFPAGLIIYWSWSNVISI 550 + +++ +GL +Y+ SN+I+I Sbjct: 556 MLIFFNNYASGLSLYYFISNLITI 579 >gi|301056960|ref|YP_003795171.1| stage III sporulation protein J [Bacillus anthracis CI] gi|300379129|gb|ADK08033.1| stage III sporulation protein J [Bacillus cereus biovar anthracis str. CI] Length = 255 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 83/236 (35%), Positives = 128/236 (54%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I P + +++ FIQ K++ Sbjct: 156 SKHTFLW---FDLGQAD-----------PYY--------ILPAVAAITTFIQQKLA-MAG 192 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM+L MP++ + +FPA L +YW N+ I Q +I G EI Sbjct: 193 TAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLI---KGPEI 245 >gi|229164437|ref|ZP_04292365.1| Membrane protein oxaA 1 [Bacillus cereus R309803] gi|228619042|gb|EEK75940.1| Membrane protein oxaA 1 [Bacillus cereus R309803] Length = 246 Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 85/237 (35%), Positives = 132/237 (55%), Gaps = 37/237 (15%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +L GN +G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFADLFGNNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 146 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I PI+ +++ FIQ K++ Sbjct: 147 SKHTFLWF---DLGQAD-----------PYY--------ILPIVAAITTFIQQKLA-MAG 183 Query: 513 DKGQ----AMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM++ MP+ + VFA+ +FPA L +YW N+ I Q +I G EI Sbjct: 184 TAGQNPQMAMMIWLMPIMILVFAI-NFPAALSLYWVVGNIFGIAQMYLI---KGPEI 236 >gi|167629167|ref|YP_001679666.1| stage iii sporulation protein j/oxaa-like protein precursor [Heliobacterium modesticaldum Ice1] gi|167591907|gb|ABZ83655.1| stage iii sporulation protein j/oxaa-like protein precursor [Heliobacterium modesticaldum Ice1] Length = 222 Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 30/205 (14%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + ++G+AI+L T+ +K+L +PL+ KQ S M + PK L+EK+K+ P Q Q+AM+ Sbjct: 25 IPSYGLAIILITIVIKMLLYPLSAKQMKSMKVMAELAPKQKALQEKYKKDP-QKAQEAMM 83 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRHAPFWGWIKDLAAADPTNIF 474 QLYK H +NPL+GC P+L+Q P+ A Y + L HA F W+ +L+A DP Sbjct: 84 QLYKEHGVNPLSGCLPLLIQFPILIAFYNGLMAFPYLNEAHATFL-WVANLSAPDPY--- 139 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP------PPADKGQAMILNWMPVVFV 528 I P++ + + F+QMK++P P A++ Q +++ MP++ Sbjct: 140 -----------------ILPLLATATTFLQMKVTPSSAGGNPQAEQTQKIMMYSMPLLIG 182 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQ 553 + SF AGL +YW N + I+QQ Sbjct: 183 WMAHSFAAGLSLYWVTFNTVGILQQ 207 >gi|260062422|ref|YP_003195502.1| putative inner membrane protein translocase component YidC [Robiginitalea biformata HTCC2501] gi|88783985|gb|EAR15156.1| putative inner membrane protein translocase component YidC [Robiginitalea biformata HTCC2501] Length = 616 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 87/295 (29%), Positives = 156/295 (52%), Gaps = 37/295 (12%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 S ET+F +F A+E+ + G+ + + F G + + YE DL Sbjct: 299 SSETAFTKEFSI-------------ASELPVTGGELSRSMQWYF-GPTDIDVLEQYE-DL 343 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQ 382 A+ + WG F +I + +F + FY + +F GIAI++ T+ V++L P+ K Sbjct: 344 ALAD-SIPFGWGIFGWINRYIF---TPFYGFLASFLPFGIAIVVMTIIVRILMSPVTYKS 399 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y+S A M+ ++P+I E+ EK+K + + Q+A ++LY ++PL+GC P LLQ+P+F+A Sbjct: 400 YLSQAKMRVLKPEITEINEKYKDNAMKK-QQATMKLYNKAGVSPLSGCIPALLQLPIFYA 458 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSM 501 ++ S +R F W +DL++ D LPF +P + HV ++PI+ S+++ Sbjct: 459 LFMFFPTSFALRQKSFL-WAEDLSSYDT------IAQLPFSIPFYGDHVSLFPILASVAI 511 Query: 502 FIQM------KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 F M +M P I+ P++ +F +++ +GL +Y+ SN+I+I Sbjct: 512 FFYMMMTTGQQMQTQPGMPNMKFIMYLSPLMMLFFFNNYASGLSLYYFVSNLITI 566 >gi|30023510|ref|NP_835141.1| OxaA-like protein precursor [Bacillus cereus ATCC 14579] gi|229130732|ref|ZP_04259685.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-Cer4] gi|38502939|sp|Q814F4|OXAA1_BACCR RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|29899071|gb|AAP12342.1| 60 kDa inner membrane protein YIDC [Bacillus cereus ATCC 14579] gi|228652749|gb|EEL08634.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-Cer4] Length = 258 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 78/223 (34%), Positives = 123/223 (55%), Gaps = 30/223 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +L N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTAEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W DL AD PFY I P++ +++ FIQ K++ Sbjct: 156 KQHSFL-WF-DLGHAD-----------PFY--------ILPVVAAITTFIQQKLA-MAGT 193 Query: 514 KGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 GQ AM+L MP++ + +FPA L +YW N+ I Q Sbjct: 194 AGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQ 236 >gi|228955736|ref|ZP_04117731.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229072951|ref|ZP_04206147.1| Membrane protein oxaA 1 [Bacillus cereus F65185] gi|229181732|ref|ZP_04309055.1| Membrane protein oxaA 1 [Bacillus cereus 172560W] gi|229193737|ref|ZP_04320678.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 10876] gi|228589762|gb|EEK47640.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 10876] gi|228601765|gb|EEK59263.1| Membrane protein oxaA 1 [Bacillus cereus 172560W] gi|228710197|gb|EEL62175.1| Membrane protein oxaA 1 [Bacillus cereus F65185] gi|228803964|gb|EEM50588.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 255 Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 78/223 (34%), Positives = 123/223 (55%), Gaps = 30/223 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +L N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFIQMPILFAFYHAIMRTAEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W DL AD PFY I P++ +++ FIQ K++ Sbjct: 156 KQHSFL-WF-DLGHAD-----------PFY--------ILPVVAAITTFIQQKLA-MAGT 193 Query: 514 KGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 GQ AM+L MP++ + +FPA L +YW N+ I Q Sbjct: 194 AGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQ 236 >gi|221633069|ref|YP_002522294.1| inner membrane protein oxaA [Thermomicrobium roseum DSM 5159] gi|221155473|gb|ACM04600.1| inner membrane protein oxaA [Thermomicrobium roseum DSM 5159] Length = 312 Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 80/214 (37%), Positives = 114/214 (53%), Gaps = 33/214 (15%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + G+ G+AI+L T+ +K L PL K ST M+ +QPKI EL++K+ Q Q L Sbjct: 20 EVTGSAGLAIILFTILIKTLLLPLTIKSVRSTKAMQELQPKIRELQKKYGQDR-QRLSAE 78 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG----WIKDLAAADP 470 M++LY+ H INP++GC P+LLQIPVFF +Y I +L + W WI DLA DP Sbjct: 79 MMKLYQEHGINPMSGCLPMLLQIPVFFGLYFAIR-NLSLSQVGAWAHGFLWIPDLAKPDP 137 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-----DKGQAMILN---W 522 +I PI+ L FIQ +M+ P D Q M+ + + Sbjct: 138 LHIL-------------------PILAGLFQFIQTRMTRPAGVRRFEDPQQQMMYSMMLF 178 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 MP++ V +F AG ++YW S V S+VQQ +I Sbjct: 179 MPLMVVLFGWNFAAGPVLYWVVSAVYSVVQQWLI 212 >gi|62185087|ref|YP_219872.1| putative inner membrane protein translocase component YidC [Chlamydophila abortus S26/3] gi|62148154|emb|CAH63911.1| putative lipoprotein [Chlamydophila abortus S26/3] Length = 794 Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 100/327 (30%), Positives = 170/327 (51%), Gaps = 33/327 (10%) Query: 253 GISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI-LPGKSITTTNFLFAG 311 G + Y + +P++ +S + + A +K+ E + LP + T ++AG Sbjct: 463 GYAAAYVSGNSVPTRLSSLYPK------NQAYPASKYPGYETLLPLPKEEGTYRFLVYAG 516 Query: 312 AKEFPTIHHYEKDLAIPRFE--MLIDW----GWFYFIAKP----MFMLMSYFYNLVGNFG 361 PT+ ++ P+ E +D G F FI +P +F++M +F + G++G Sbjct: 517 PLAEPTLKALDRAYTNPKGENSQYLDCITFRGLFAFITEPFAALLFIIMKFFKMITGSWG 576 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 I+I+L TVF+KLL +PL S M+ + P I E+++K+K+ P + Q ++ LYKT Sbjct: 577 ISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKKEPKRA-QMEVMALYKT 635 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFG-I 479 + +NP+ GC P+L+Q+P A++ ++ S +R A F GWI +L A D LF Sbjct: 636 NKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWT 690 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQAMILNWMPVVFVFALS 532 P + G + PI++ + MFIQ K+S P D + Q + M ++F F Sbjct: 691 TPVWFIG-NEFHLLPILLGVVMFIQQKLSALQKKGPVTDQQRQQEAMGTMMALLFTFMFY 749 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKM 559 +FP+GL IYW S ++ ++QQ V K+ Sbjct: 750 NFPSGLNIYWFSSMLLGLIQQWVTNKI 776 >gi|313679788|ref|YP_004057527.1| membrane protein insertase, yidc/oxa1 family [Oceanithermus profundus DSM 14977] gi|313152503|gb|ADR36354.1| membrane protein insertase, YidC/Oxa1 family [Oceanithermus profundus DSM 14977] Length = 461 Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 77/217 (35%), Positives = 120/217 (55%), Gaps = 26/217 (11%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + +M Y N+G+AI+L TVFV+LL +PL +Q+ S A M I+P +DE+ +K+K Sbjct: 263 LLYVMELAYKYTTNWGLAILLLTVFVRLLLWPLMHQQFKSMAEMNKIKPLMDEINKKYKD 322 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 P + +A++ LY+ H INP AGC P+ +Q+P+ F +++VI+ + E WI DL Sbjct: 323 DPEKK-NEALMNLYREHKINPAAGCLPMFIQMPILFMMWRVIA-NYEFDQGFL--WIPDL 378 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ-MKMSPPPADKGQAMILNWMP 524 + D PFY + P + L M Q M MS D + I+ M Sbjct: 379 SLPD-----------PFY--------VLPALYVLVMLAQTMLMSHGNKDAMRQGIM--MN 417 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++F+F + FPAG+ +YW +S +I +VQQ +I K G Sbjct: 418 LIFIFLVLKFPAGVTLYWVFSTLIGLVQQWMINKQLG 454 >gi|115372258|ref|ZP_01459568.1| inner membrane protein, 60 kDa [Stigmatella aurantiaca DW4/3-1] gi|115370723|gb|EAU69648.1| inner membrane protein, 60 kDa [Stigmatella aurantiaca DW4/3-1] Length = 461 Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 80/228 (35%), Positives = 128/228 (56%), Gaps = 22/228 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P E +D+G + I K + M +F+ + GN+G+AI+L TV VKL+ PL K V Sbjct: 222 PTIEETVDFGIWAVICKLLLFFMKWFHAVTGNWGVAIILLTVLVKLVLLPLTYKSMVGME 281 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K +QPK++E+R+KF + ++ + M +LY+ +NPL GC P+L+Q+PV+ A++ + Sbjct: 282 AVKELQPKMEEIRKKFAEDRERMNMEVM-KLYQQAKVNPLGGCLPLLIQMPVWIALFTAL 340 Query: 448 SISLEMRHAPFWGWI-KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 S ++ PF+G + +DL DPT + P+ + +SM I K Sbjct: 341 RNSFDIYWEPFFGPVWRDLTYKDPTYLL-------------------PLALGVSMIITQK 381 Query: 507 MSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M P D QA I+ W MP++F L +PAGL +Y +N++SI QQ Sbjct: 382 MQPQMMDAAQARIMIWVMPIIFTLTLLQYPAGLSLYIFTNNLLSIGQQ 429 >gi|329955034|ref|ZP_08296015.1| membrane protein insertase, YidC/Oxa1 family domain protein [Bacteroides clarus YIT 12056] gi|328526324|gb|EGF53339.1| membrane protein insertase, YidC/Oxa1 family domain protein [Bacteroides clarus YIT 12056] Length = 615 Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 91/340 (26%), Positives = 170/340 (50%), Gaps = 39/340 (11%) Query: 247 ESNSWLGISDKYWASVFIPS---KETSFHSQFKYLSDGHAR-YQAKFSANEITILPGKSI 302 E W+ +++++SVF+ ++T +S+ + G+ + Y A+ S P Sbjct: 249 ERLDWIAFKNQFFSSVFLADADFEKTKLNSKMEAQGSGYIKDYSAEMST---AFDPTGKT 305 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEM---------LIDWGWFYFIAKPMFMLMSYF 353 T F + G + T+ +K ++E+ LI W +F L S+ Sbjct: 306 PTQLFFYFGPNHYKTLTALDKGRE-DKWELNRLVYLGWPLIRWINKWFTINIFDWLSSWG 364 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQ 412 ++ GI ++L T+ VK + FP K Y+S+A M+ ++PKIDE+ +K+ KQ Q Sbjct: 365 LSM----GIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKPKIDEIGKKYPKQEDAMKKQ 420 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R F W DL+ D Sbjct: 421 QEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDA-- 477 Query: 473 IFTLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----M 523 F PF++P F+ H+ ++ ++M+++ + + D G Q + W M Sbjct: 478 ----FINFPFHIP-FLGSHLSLFCLLMTVTNILNTRFMMQQQDTGANPQMAAMKWMSYLM 532 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 PV+F+F L+ +P+GL Y+ S +IS+V ++ KM E Sbjct: 533 PVMFLFILNDYPSGLNYYYFISTLISVVTTLIMRKMTNEE 572 >gi|310825627|ref|YP_003957985.1| inner membrane protein, 60 kda [Stigmatella aurantiaca DW4/3-1] gi|309398699|gb|ADO76158.1| Inner membrane protein, 60 kDa [Stigmatella aurantiaca DW4/3-1] Length = 607 Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 80/228 (35%), Positives = 128/228 (56%), Gaps = 22/228 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P E +D+G + I K + M +F+ + GN+G+AI+L TV VKL+ PL K V Sbjct: 368 PTIEETVDFGIWAVICKLLLFFMKWFHAVTGNWGVAIILLTVLVKLVLLPLTYKSMVGME 427 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K +QPK++E+R+KF + ++ + M +LY+ +NPL GC P+L+Q+PV+ A++ + Sbjct: 428 AVKELQPKMEEIRKKFAEDRERMNMEVM-KLYQQAKVNPLGGCLPLLIQMPVWIALFTAL 486 Query: 448 SISLEMRHAPFWGWI-KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 S ++ PF+G + +DL DPT + P+ + +SM I K Sbjct: 487 RNSFDIYWEPFFGPVWRDLTYKDPTYLL-------------------PLALGVSMIITQK 527 Query: 507 MSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M P D QA I+ W MP++F L +PAGL +Y +N++SI QQ Sbjct: 528 MQPQMMDAAQARIMIWVMPIIFTLTLLQYPAGLSLYIFTNNLLSIGQQ 575 >gi|304405892|ref|ZP_07387550.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus curdlanolyticus YK9] gi|304345135|gb|EFM10971.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus curdlanolyticus YK9] Length = 258 Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 120/199 (60%), Gaps = 27/199 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G +G++I+L T+ V+ L PL KQY S+ M+ IQP++++LR+K K + PQ+LQ+ ++ Sbjct: 65 GEYGLSILLLTIIVRTLILPLTLKQYRSSKAMQAIQPELEQLRKKHKDN-PQLLQQETMK 123 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 L++ +++NP+AGC P+++Q+PVF A+Y I ++ +R F W+ +L DP +I Sbjct: 124 LFQQNSVNPMAGCLPMIVQMPVFIALYNAIYMNSAIREHQFL-WL-ELGQKDPYHIL--- 178 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG----QAMILNWMPVVFVFALSS 533 PII +++ F+Q KM QAM+L + ++FV AL S Sbjct: 179 ----------------PIIAAITTFVQTKMMQSQQKTTMPGMQAMLLIFPVMIFVMAL-S 221 Query: 534 FPAGLIIYWSWSNVISIVQ 552 FPA L +YW +SN+ +IVQ Sbjct: 222 FPAALPLYWIFSNLYTIVQ 240 >gi|56420357|ref|YP_147675.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426] gi|56380199|dbj|BAD76107.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426] Length = 249 Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 124/226 (54%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ PM L+ + G N+GIAI++ T+ V+ PL KQ+ ++ M+ ++P++ Sbjct: 32 WNHYFVYPMSKLLLTLGHWFGDNYGIAIIVLTLIVRFCLLPLILKQFRASLAMQKLRPEL 91 Query: 397 DELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+K P+ LQ+ M+QLY+ H +NP +GC P+L+Q+P+F A+Y IS + E+ Sbjct: 92 LKLQEKYKSKDPETQRKLQQEMMQLYQKHGVNPASGCLPVLIQMPIFMALYYAISRTQEI 151 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W+ +L DP I P++ +L+ FI +++SP A+ Sbjct: 152 KTHSFL-WV-ELGHRDPYFIL-------------------PVLAALTTFISLRLSPSMAE 190 Query: 514 K---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+L MPV+ SS P+ L +YW SI+Q ++ Sbjct: 191 EQMPQMAMMLYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLIL 236 >gi|323141441|ref|ZP_08076331.1| stage III sporulation protein J [Phascolarctobacterium sp. YIT 12067] gi|322414097|gb|EFY04926.1| stage III sporulation protein J [Phascolarctobacterium sp. YIT 12067] Length = 214 Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 32/227 (14%) Query: 341 FIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 F+A + +++ YN + N G+AI+L T+ +KL+ +PL +KQ ST M IQPK Sbjct: 3 FLANIVQQVLTVLYNFTESVGIPNLGLAIVLMTIIIKLIMYPLTQKQIQSTKAMMEIQPK 62 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + L+EK+K Q L + LYK+ +NPLAGC P+L+Q+P+ I+ I H Sbjct: 63 MKALQEKYKDD-KQRLNMELANLYKSEGVNPLAGCLPLLIQMPIMIGIFYGIRDYNYAAH 121 Query: 456 APF---WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + W+ D++ ADPT + P++ +L+ FIQ K + PA Sbjct: 122 PEIVTSFLWLADISKADPTYVL-------------------PVLSALTTFIQTKQT-MPA 161 Query: 513 DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + G A M++ +MP+ + +FPAGL++YW N++ I QQ+++ Sbjct: 162 NGGGAQNKMMMYFMPLFIGYISLTFPAGLVLYWVVMNIMQIAQQSIM 208 >gi|300118812|ref|ZP_07056532.1| OxaA-like protein precursor [Bacillus cereus SJ1] gi|298723780|gb|EFI64502.1| OxaA-like protein precursor [Bacillus cereus SJ1] Length = 255 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 82/236 (34%), Positives = 128/236 (54%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFNSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF---DLGQAD-----------PYY--------ILPVVAAITTFIQQKLA-MAG 192 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM+L MP++ + +FPA L +YW N+ I Q +I G EI Sbjct: 193 TAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLI---KGPEI 245 >gi|332521156|ref|ZP_08397614.1| membrane protein insertase, YidC/Oxa1 family [Lacinutrix algicola 5H-3-7-4] gi|332043249|gb|EGI79446.1| membrane protein insertase, YidC/Oxa1 family [Lacinutrix algicola 5H-3-7-4] Length = 634 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 91/311 (29%), Positives = 159/311 (51%), Gaps = 31/311 (9%) Query: 255 SDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE 314 +DK + SV + SK+ + + + +FSA L G I + L+ G + Sbjct: 284 TDKQFKSVALTSKDLVEDEEIDTV------FTKQFSAKTALALNGNEINESLGLYYGPTD 337 Query: 315 FPTIHHYEKDL--AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 + +Y+K+L +IP WG F +I K +F+ + F + +GIAI++ TV +K Sbjct: 338 SKILKNYDKNLEESIP-----FGWGIFGWINKYLFVPLFSFLSSFLPYGIAIIVMTVLIK 392 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 L + KQY+S MK ++P++D +REK K + + Q+ M L +PLAGC P Sbjct: 393 LSMSFVQYKQYLSQMKMKILKPELDAIREKHKDNKMKAQQETMA-LQNKAGASPLAGCLP 451 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 L+Q+PVF+A++ + +R F W DL++ D F +PFY H+ + Sbjct: 452 ALIQMPVFYALFMFFPTAFALRQKKFL-WADDLSSFDSIYKFPDGFSIPFYGD---HISL 507 Query: 493 WPIIMSLSMFIQMKMS------PPPADKG---QAMILNWM----PVVFVFALSSFPAGLI 539 +PI+ +++F MK++ P +G A ++ +M P++ + +S+ +GL Sbjct: 508 FPILAGIAIFFYMKLTTGQQQMSAPQQEGMPDMAKMMKYMIYFAPIMMIIFFNSYASGLS 567 Query: 540 IYWSWSNVISI 550 +Y+ SN+ISI Sbjct: 568 LYYFISNLISI 578 >gi|298482875|ref|ZP_07001058.1| inner membrane protein OxaA [Bacteroides sp. D22] gi|298271075|gb|EFI12653.1| inner membrane protein OxaA [Bacteroides sp. D22] Length = 617 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 89/318 (27%), Positives = 164/318 (51%), Gaps = 27/318 (8%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL--PGKSITTTNF 307 W+ +++++SVFI ++ S + + Y +SA T GK T F Sbjct: 254 DWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMYF 313 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVG---NFGI 362 F G F T+ +K ++E+ L+ GW F+ ++ F L G + GI Sbjct: 314 YF-GPNHFKTLKALDKGRD-EKWELHRLVYLGWPLIRWINQFITINVFDWLSGWGLSMGI 371 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKT 421 +++ T+ VK++ +P K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY Sbjct: 372 VLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKIDEISKKYPKQEDAMKKQQEVMGLYSQ 431 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + ++P+ GC P+LLQ P+ A++ + ++E+R F W DL+ D F P Sbjct: 432 YGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDAIITF------P 484 Query: 482 FYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFVFALS 532 F++P F+ H+ ++ ++M+++ + K + D G Q + W MP++F+F L+ Sbjct: 485 FHIP-FLGNHLSLFCLLMTVTNILNTKYTMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLN 543 Query: 533 SFPAGLIIYWSWSNVISI 550 +P+GL Y+ S +IS+ Sbjct: 544 DYPSGLNYYYFVSTLISV 561 >gi|213962572|ref|ZP_03390834.1| inner membrane protein OxaA [Capnocytophaga sputigena Capno] gi|213954898|gb|EEB66218.1| inner membrane protein OxaA [Capnocytophaga sputigena Capno] Length = 609 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 89/322 (27%), Positives = 165/322 (51%), Gaps = 32/322 (9%) Query: 246 HESNSWLGISDKYWASVFI---PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS- 301 E SW+ + SV I P ++ +F S +++G + K++ N +T LP K+ Sbjct: 248 EEKVSWVAYKQHLFTSVLISDNPFEKGNFISHNIAINEGK---EVKYTKNFLTSLPIKAK 304 Query: 302 ---ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 ++ + + G ++ + Y + + + WG F ++ K +F+ + YN + Sbjct: 305 SGELSESLHFYFGPSDYNVLKQYNDKYELTEL-IPLGWGIFGWLNKWLFIPL---YNFLA 360 Query: 359 NF---GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++ G+ I+L T V++L P+ K YVS A MK ++P+IDE+ +K+ + P Q+ Sbjct: 361 DYFSVGLVIILMTFIVRILLSPIVYKSYVSQAKMKVLRPEIDEINKKYDE--PMKRQQET 418 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY +NPL+GC P LLQ+PVF A++ +R F W DL++ D IF Sbjct: 419 MALYSKAGVNPLSGCIPALLQLPVFLALFNFFPTEFGLRQKSFL-WAHDLSSYDA--IFE 475 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFI----QMKMSPPPADKG---QAMILNWMPVVFV 528 L +PFY HV ++P++ S+++ I M + P G ++ P++ + Sbjct: 476 LPFSIPFYGS---HVSLFPLLASIAILIYSLMTMAQTVQPQQPGVPNMKFLIYLSPIMML 532 Query: 529 FALSSFPAGLIIYWSWSNVISI 550 F +++ +GL +Y+ SN+++I Sbjct: 533 FFFNNYASGLSLYYFISNLLTI 554 >gi|262340996|ref|YP_003283851.1| putative inner membrane protein translocase component YidC [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272333|gb|ACY40241.1| putative inner membrane protein translocase component YidC [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 580 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 102/345 (29%), Positives = 180/345 (52%), Gaps = 46/345 (13%) Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF---KYLSDGHA 283 K L E+K E+++ISN + W+ +++AS+F+P K+ F + F + S G++ Sbjct: 231 KHLSEKK---TEETNISNMN----WIAHKQQFFASIFVPEKK--FQNIFVRSENFSSGNS 281 Query: 284 RYQAKFSANEITILPGKSITTTNFLFA---GAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 +F T++ +F F G +F + Y+ FE +I +GW + Sbjct: 282 LKNIQFK----TLMNANKNEEIHFSFRFYFGPLDFNLLKGYKNG-----FENIIPFGWGF 332 Query: 341 F--IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 I K F+++ F N+G+ I+L T VKL+ +P+ KQY +A MK I+P+++ Sbjct: 333 LKWINKYFFLIIFQFLEQTSLNYGVIIILMTFVVKLILYPITYKQYKLSAIMKLIRPEVE 392 Query: 398 ELREKFKQSPPQV-LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 EL K+K + QKAM++LYK INP++GC L QIP+F++++K L +R Sbjct: 393 ELNNKYKNNEDAFKKQKAMMELYKKVGINPMSGCISTLFQIPIFYSLFKFFPTLLNLRGK 452 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQMKMS-PPPADK 514 F W++DL + D LPF++P + H+ + ++ +L++ + K+S D Sbjct: 453 SFL-WVEDLTSYDSI------LELPFFIPFYGNHISLLTLLYALALLVYTKLSNNEKKDI 505 Query: 515 GQ---------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 Q + IL MPV+ + ++S+ + L +Y+ SN+I+I Sbjct: 506 SQNENGTIPDMSFILYLMPVIMLLFINSYASALSLYYFTSNIINI 550 >gi|295083924|emb|CBK65447.1| protein translocase subunit yidC [Bacteroides xylanisolvens XB1A] Length = 617 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 89/318 (27%), Positives = 164/318 (51%), Gaps = 27/318 (8%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP--GKSITTTNF 307 W+ +++++SVFI ++ S + + Y +SA T GK T F Sbjct: 254 DWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGSGYIKDYSAEMNTFFDPTGKEPTEMYF 313 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVG---NFGI 362 F G F T+ +K ++E+ L+ GW F+ ++ F L G + GI Sbjct: 314 YF-GPNHFKTLKALDKGRD-EKWELHRLVYLGWPLIRWINQFITINVFDWLSGWGLSMGI 371 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKT 421 +++ T+ VK++ +P K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY Sbjct: 372 VLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKIDEISKKYPKQEDAMKKQQEVMGLYSQ 431 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + ++P+ GC P+LLQ P+ A++ + ++E+R F W DL+ D F P Sbjct: 432 YGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDAIITF------P 484 Query: 482 FYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFVFALS 532 F++P F+ H+ ++ ++M+++ + K + D G Q + W MP++F+F L+ Sbjct: 485 FHIP-FLGNHLSLFCLLMTVTNILNTKYTMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLN 543 Query: 533 SFPAGLIIYWSWSNVISI 550 +P+GL Y+ S +IS+ Sbjct: 544 DYPSGLNYYYFVSTLISV 561 >gi|189466153|ref|ZP_03014938.1| hypothetical protein BACINT_02523 [Bacteroides intestinalis DSM 17393] gi|189434417|gb|EDV03402.1| hypothetical protein BACINT_02523 [Bacteroides intestinalis DSM 17393] Length = 616 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 92/335 (27%), Positives = 167/335 (49%), Gaps = 29/335 (8%) Query: 247 ESNSWLGISDKYWASVFIPS---KETSFHSQFKYLSDGHAR-YQAKFSANEITILPGKSI 302 E W+ +++++SVFI ++T S+ + G+ + Y A+ S + P Sbjct: 250 ERLDWIAFKNQFFSSVFIADTDFEKTKLVSKMEREGSGYIKDYSAEMST---SFDPTGKQ 306 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVG-- 358 T F + G + T+ +K + ++E+ L+ GW + ++ F L G Sbjct: 307 PTQMFFYFGPNHYKTLTALDKGRS-EKWELNRLVYLGWPLIRWINKWFTINIFDWLSGWG 365 Query: 359 -NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMI 416 + GI ++L T+ VK + FP K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ M+ Sbjct: 366 LSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKPKIDEINKKYPKQEDAMKKQQEMM 425 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +Y + ++P+ GC P+L+Q PV A++ + ++E+R F W DL+ D Sbjct: 426 GMYSQYGVSPMGGCLPMLVQFPVLIALFMFVPSAIELRQQSFL-WADDLSTYDA------ 478 Query: 477 FGILPFYLPGF-MHVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFV 528 F PF +P H+ ++ ++M+L + K D G Q + W MP++ + Sbjct: 479 FINFPFNIPFLGSHLSLFCLLMTLVNILNSKFMMQQQDTGANPQMAAMKWMTYLMPIMML 538 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F L+S+P+GL Y+ S +IS+V ++ K E Sbjct: 539 FILNSYPSGLNYYYFISTLISVVTTLILRKTTNEE 573 >gi|229087976|ref|ZP_04220081.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-44] gi|228695333|gb|EEL48213.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-44] Length = 246 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 79/228 (34%), Positives = 125/228 (54%), Gaps = 32/228 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF L G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFAKLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTEEI 146 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I PI+ +++ FIQ K++ Sbjct: 147 SKHTFLW---FDLGQAD-----------PYY--------ILPIVAAITTFIQQKLA-MAG 183 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 GQ AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 184 TAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYMI 231 >gi|332877632|ref|ZP_08445375.1| membrane protein insertase, YidC/Oxa1 family domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684381|gb|EGJ57235.1| membrane protein insertase, YidC/Oxa1 family domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 606 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/320 (26%), Positives = 158/320 (49%), Gaps = 26/320 (8%) Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP----GKS 301 E SW+ + SV I + Y K++ N + P G Sbjct: 246 EEQVSWVAYKQHLFTSVLISDSAFANGDFLSYNIANEESKDVKYTKNLKSTFPLKTKGGE 305 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF- 360 ++ + + G ++ + Y + + + WG F ++ K +F+ + YN + ++ Sbjct: 306 LSESLHFYFGPSDYNVLKQYNDKYELTEL-IPLGWGIFGWLNKWLFIPL---YNFLADYF 361 Query: 361 --GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 G+ I+L T+ V+LL P+ K YVS A MK ++P+I+E+ +K+++ P Q+ + L Sbjct: 362 SVGLVIILMTIIVRLLLSPIVYKSYVSQAKMKVLRPEIEEINKKYEE--PMKRQQETMAL 419 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y +NP++GC P LLQ+PVF A++ +R F W +DL++ D IF L Sbjct: 420 YSKAGVNPMSGCIPALLQLPVFLALFNFFPTEFGLRQKSFL-WAEDLSSYDA--IFELPF 476 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFI----QMKMSPPPADKG---QAMILNWMPVVFVFAL 531 +PFY HV ++P++ S+++FI M + P G ++ PV+ +F Sbjct: 477 SIPFYGS---HVSLFPLLASVAIFIYSMMTMAQTVQPQQPGMPNMKFLIYLSPVMMLFFF 533 Query: 532 SSFPAGLIIYWSWSNVISIV 551 +++ +GL +Y+ SN+++I+ Sbjct: 534 NNYASGLSLYYFVSNLLTIL 553 >gi|311746146|ref|ZP_07719931.1| inner membrane protein OxaA [Algoriphagus sp. PR1] gi|126576367|gb|EAZ80645.1| inner membrane protein OxaA [Algoriphagus sp. PR1] Length = 599 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 131/508 (25%), Positives = 238/508 (46%), Gaps = 59/508 (11%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYH-------LDVSSNSPIVTLLSPSNTKNAYFAE 123 V L+N + SI+ KGA +++ L+ Y L + S S + SNT + + Sbjct: 84 VTLENDLIKVSISTKGASVNEVELKEYKSWTQEPLLLIDSESSKMAFSLESNTGSVNLND 143 Query: 124 LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIV 183 L + + N+ + N V L I+ + +++ +D + Sbjct: 144 LYFNPSLNSSQDEEGNAVHTLTLSAGTESGEIIQTFTLKDGSYEVHKSLKID-----RFS 198 Query: 184 DTVTNNSI-----DQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV-LGDKSLVEQKYSDI 237 + T NS+ DQ+R R I + +T N F + + + +GD D+ Sbjct: 199 NYFTGNSLQFTWADQVRKQERD-IGESRRKTQVNYFLASDSYENLGVGD---------DL 248 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 E+ ++ E W+G S +++ + I + ET + + + K+ ++I Sbjct: 249 EQEQVA---EPVKWIGFSQRFFTAGII-ADETFQDVNLAQSTPADSSF-VKYMETSLSI- 302 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY------FIAKPMFMLMS 351 P K T + + G + + FE +D G+F+ +I +F + Sbjct: 303 PLKDNTASFRFYFGPDNYKGLKK-----VTEGFEKNVDMGYFFVSWVNKYIIVNLFAFLE 357 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 F++ N+G+ I+L + +KL PL K YV A M+ I+P+IDEL+EK+ P ++ Sbjct: 358 KFFS---NYGVIIILIVLAIKLALSPLTYKSYVGMAKMRVIKPEIDELKEKYGDDPTKMQ 414 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ M +L+ ++P++GC P++LQ+P FA++ ++++R F W DL+ D Sbjct: 415 QEQM-KLFGKLGVSPISGCLPMVLQMPFLFAMFFFFPNAIQLRQESFL-WANDLSTYD-- 470 Query: 472 NIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQMKMSPP-PADKGQAMILNW-MPVVFV 528 T F LPF +P + HV ++ ++M++S + K + G L + MPV+F+ Sbjct: 471 ---TFFN-LPFTIPFYGSHVSLFTLLMTVSQIVYTKFNNQLTTATGPMKNLGYIMPVMFM 526 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 F L+S+PAGL Y+ SN+++ QQAVI Sbjct: 527 FILNSYPAGLSFYYFVSNMVTFGQQAVI 554 >gi|269836199|ref|YP_003318427.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus DSM 20745] gi|269785462|gb|ACZ37605.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus DSM 20745] Length = 332 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 115/216 (53%), Gaps = 33/216 (15%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + Y + G+ G+++++ T+ +K L PL K ST+ M+ IQPK+ EL++K+ + + Sbjct: 15 LGYIADYTGSAGLSVIIFTILIKTLLLPLTVKAVRSTSAMQEIQPKLKELQKKYGKDRQR 74 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG----WIKDL 465 + Q+ M +LY+ H INP AGC P+LLQ+P+ F +Y+ I SL WG W+ L Sbjct: 75 LSQETM-KLYQEHGINPAAGCLPMLLQLPILFGLYEAIR-SLSQAGTGTWGEGFMWLPSL 132 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-----DKGQAM-- 518 A+ DP I P++ L +Q KM+ P D Q M Sbjct: 133 ASTDPHYIL-------------------PVMAGLFQLVQTKMTRPAGQGKITDPQQRMMN 173 Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++ +MP++ V FP+GL++YW+ S + S++QQ Sbjct: 174 TMMTFMPLMVVAFGVKFPSGLVLYWTVSALYSVIQQ 209 >gi|229065145|ref|ZP_04200438.1| Membrane protein oxaA 1 [Bacillus cereus AH603] gi|228716174|gb|EEL67893.1| Membrane protein oxaA 1 [Bacillus cereus AH603] Length = 246 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/236 (36%), Positives = 129/236 (54%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF L G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFAELFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + + Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 F W DL AD PFY I PI+ +++ FIQ K++ Sbjct: 147 SEHTFL-WF-DLGQAD-----------PFY--------ILPIVAAITTFIQQKLA-MAGT 184 Query: 514 KGQ----AMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM++ MP+ + VFA+ +FPA L +YW N+ I Q +I G EI Sbjct: 185 AGQNPQMAMMIWLMPIMILVFAI-NFPAALSLYWVVGNIFGIAQMYMI---KGPEI 236 >gi|163943166|ref|YP_001648050.1| OxaA-like protein precursor [Bacillus weihenstephanensis KBAB4] gi|229136311|ref|ZP_04265058.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST196] gi|229170189|ref|ZP_04297875.1| Membrane protein oxaA 1 [Bacillus cereus AH621] gi|163865363|gb|ABY46422.1| 60 kDa inner membrane insertion protein [Bacillus weihenstephanensis KBAB4] gi|228613290|gb|EEK70429.1| Membrane protein oxaA 1 [Bacillus cereus AH621] gi|228647183|gb|EEL03271.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST196] Length = 255 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 82/228 (35%), Positives = 126/228 (55%), Gaps = 32/228 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF L G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFAELFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + + Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 F W DL AD PFY I PI+ +++ FIQ K++ Sbjct: 156 SEHTFL-WF-DLGQAD-----------PFY--------ILPIVAAITTFIQQKLA-MAGT 193 Query: 514 KGQ----AMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 GQ AM++ MP+ + VFA+ +FPA L +YW N+ I Q +I Sbjct: 194 AGQNPQMAMMIWLMPIMILVFAI-NFPAALSLYWVVGNIFGIAQMYMI 240 >gi|300776109|ref|ZP_07085968.1| inner membrane protein OxaA [Chryseobacterium gleum ATCC 35910] gi|300505242|gb|EFK36381.1| inner membrane protein OxaA [Chryseobacterium gleum ATCC 35910] Length = 599 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/326 (26%), Positives = 169/326 (51%), Gaps = 28/326 (8%) Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 ++++ E+ +W+G+ ++++SV I +K S+ + Y KF+ + Sbjct: 231 RTTMDEEKETLNWIGVKQQFFSSV-IEAKNGFTQSKGNQENVEEGEYLKKFNYEGFVQMT 289 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G + + + P + Y+K+ F+ ++ GW + A + M + Y+++ Sbjct: 290 GSELNQDFTWYFMPLDLPLLKSYDKN-----FDEILPLGWSFIGAMNRYFFM-WLYSIIA 343 Query: 359 NFGIA----IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +G++ I + T+ VKL+ P+ KQ+ +A MK I+P+IDE+ KFK + P Q+A Sbjct: 344 AWGLSAGWVIFVMTIIVKLILSPIMYKQHKLSAMMKVIRPEIDEVNAKFKDADPMKKQQA 403 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +++Y+ +N +AGC P L+QIP+F+A+++ +++R FW + KDL A D Sbjct: 404 TMEVYRKAGVNQMAGCLPALVQIPIFYALFRFFPNFIDLRGQGFW-FAKDLTAYDD---- 458 Query: 475 TLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSP----PPADKG---QAMILNWMPV 525 LPF +P F+ H+ I+ + ++ + I M+ P +G +++ P+ Sbjct: 459 --LIKLPFKVP-FLGDHLSIFALACTIVILIYTVMTSGNMQQPQQEGMPNMKVLMYIFPI 515 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIV 551 F+F L++ +GL Y+ SN I+I+ Sbjct: 516 TFLFFLNTSASGLSWYYFVSNAINIL 541 >gi|229014652|ref|ZP_04171766.1| Membrane protein oxaA 1 [Bacillus mycoides DSM 2048] gi|228746663|gb|EEL96552.1| Membrane protein oxaA 1 [Bacillus mycoides DSM 2048] Length = 255 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF L G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFAELFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + + Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 F W DL AD PFY I P++ +++ FIQ K++ Sbjct: 156 SEHTFL-WF-DLGQAD-----------PFY--------ILPVVAAITTFIQQKLA-MAGT 193 Query: 514 KGQ----AMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM++ MP+ + VFA+ +FPA L +YW N+ I Q +I G EI Sbjct: 194 AGQNPQMAMMIWLMPIMILVFAI-NFPAALSLYWVVGNIFGIAQMYMI---KGPEI 245 >gi|317479120|ref|ZP_07938260.1| YidC/Oxa1 family membrane protein insertase [Bacteroides sp. 4_1_36] gi|316904692|gb|EFV26506.1| YidC/Oxa1 family membrane protein insertase [Bacteroides sp. 4_1_36] Length = 617 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 106/409 (25%), Positives = 193/409 (47%), Gaps = 46/409 (11%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 TNN +D I +S R R + K T N E + G+ + Y K+ Sbjct: 198 ATNNYVD-IEWSQRARQI-EKGYTYENRLA--ELTYKITGEGT----DYLSANKNDEKEV 249 Query: 246 HESNSWLGISDKYWASVFIPS---KETSFHSQFKYLSDGHAR-YQAKFSANEITILPGKS 301 E W+ +++++SVF+ ++T S+ + G+ + Y A+ S P Sbjct: 250 PERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQGSGYIKDYSAEMSTK---FDPAGK 306 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM---------LIDWGWFYFIAKPMFMLMSY 352 T F + G + T+ +K ++E+ LI W +F L S+ Sbjct: 307 EPTQLFFYFGPNHYKTLTALDKGRD-EKWELNRLVYLGWPLIRWINKWFTINIFDWLSSW 365 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVL 411 ++ GI ++ T+ VK + FP K Y+S+A M+ ++PKIDE+ +K+ KQ Sbjct: 366 GLSM----GIVLLFMTLIVKAVVFPATWKTYMSSAKMRVLKPKIDEINKKYPKQEDAMKK 421 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R F W DL+ D Sbjct: 422 QQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDA- 479 Query: 472 NIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----M 523 F PF++P H+ ++ ++M+++ + K D G Q + W M Sbjct: 480 -----FINFPFHIPFLGSHLSLFCLLMTVTNILNTKYMMQQQDTGANPQMAAMKWMSYLM 534 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 P++F+F L+ +P+GL Y+ S +IS+V +IM+ E L+ +L + Sbjct: 535 PIMFLFILNDYPSGLNYYYFISTLISVV-TTLIMRKTTNEEALLAQLEA 582 >gi|270296905|ref|ZP_06203104.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270272892|gb|EFA18755.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 617 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 108/410 (26%), Positives = 194/410 (47%), Gaps = 48/410 (11%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 TNN +D I +S R R + K T N IA G L K + E Sbjct: 198 ATNNYVD-IEWSQRARQI-EKGYTYENRLAELTYKIAGEGTDYLSANKNDEKE------V 249 Query: 246 HESNSWLGISDKYWASVFIPS---KETSFHSQFKYLSDGHAR-YQAKFSANEITILPGKS 301 E W+ +++++SVF+ ++T S+ + G+ + Y A+ S P Sbjct: 250 PERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQGSGYIKDYSAEMSTK---FDPAGK 306 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM---------LIDWGWFYFIAKPMFMLMSY 352 T F + G + T+ +K ++E+ LI W +F L S+ Sbjct: 307 EPTQLFFYFGPNHYKTLTALDKGRD-EKWELNRLVYLGWPLIRWINKWFTINIFDWLSSW 365 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVL 411 ++ GI ++ T+ VK + FP K Y+S+A M+ ++PKIDE+ +K+ KQ Sbjct: 366 GLSM----GIVLLFMTLIVKAVVFPATWKTYMSSAKMRVLKPKIDEINKKYPKQEDAMKK 421 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R F W DL+ D Sbjct: 422 QQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDA- 479 Query: 472 NIFTLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW---- 522 F PF++P F+ H+ ++ ++M+++ + K D G Q + W Sbjct: 480 -----FINFPFHIP-FLGSHLSLFCLLMTVTNILNTKYMMQQQDTGANPQMAAMKWMSYL 533 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 MP++F+F L+ +P+GL Y+ S ++S+V +IM+ E L+ +L + Sbjct: 534 MPIMFLFILNDYPSGLNYYYFISTLVSVV-TTLIMRKTTNEEALLAQLEA 582 >gi|213400719|gb|ACJ47008.1| hypothetical protein [Wolbachia endosymbiont of Dirofilaria immitis] Length = 171 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 99/168 (58%), Gaps = 4/168 (2%) Query: 222 AVLG--DKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYL 278 VLG D L E Y DI K + S +W G +DKYW + IP K + K+ Sbjct: 3 GVLGTFDNKLEEWTYKDIAKKHLIKASTSGKNWFGFADKYWLTAIIPEKPDKINVSIKHT 62 Query: 279 S-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + + ++QA F + +ILPG SI++ N+ FAGAK+ + +Y+ L IP F+ +D+G Sbjct: 63 NINNIDKFQADFVKSHKSILPGTSISSVNYFFAGAKKLNLLDYYKSALNIPLFDKAVDFG 122 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 YF+ KP+F+L+ YF ++ NFG+AI+ T+ +KLL PL+ + Y+S Sbjct: 123 ILYFVTKPVFLLLEYFNFILKNFGLAILALTLVIKLLMLPLSNRSYIS 170 >gi|108761211|ref|YP_635612.1| inner membrane protein, 60 kDa [Myxococcus xanthus DK 1622] gi|108465091|gb|ABF90276.1| inner membrane protein, 60 kDa [Myxococcus xanthus DK 1622] Length = 603 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/233 (34%), Positives = 128/233 (54%), Gaps = 22/233 (9%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +D+G + I K + +M +FY + GN+G+AI+L TV VKL+ PL + VS Sbjct: 367 PPLAETVDFGIWAVICKVLLWVMKFFYGVTGNWGVAIILLTVVVKLVLLPLTYRSMVSME 426 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K +QP+++E+R+K + Q + M +LY+ +NPL GC P+L+Q+PV+ A++ + Sbjct: 427 EVKKLQPRMEEIRKKHADNREQQNLEIM-KLYQEAKVNPLGGCLPLLIQMPVWIALFTAL 485 Query: 448 SISLEMRHAPFWGWI-KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 S ++ PF G I +DL DPT + P+ + +SM I K Sbjct: 486 RNSFDIYGEPFIGPIWRDLTYKDPTYLL-------------------PLALGVSMVITQK 526 Query: 507 MSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M P D QA I+ W +P++F L +PAGL +Y +N++SI QQ + K Sbjct: 527 MQPQMMDATQAKIMTWFLPIIFTLTLLQYPAGLSLYIFTNNILSIAQQYGLRK 579 >gi|29840233|ref|NP_829339.1| putative inner membrane protein translocase component YidC [Chlamydophila caviae GPIC] gi|34098398|sp|P59809|OXAA_CHLCV RecName: Full=Inner membrane protein oxaA gi|29834581|gb|AAP05217.1| inner membrane protein, putative [Chlamydophila caviae GPIC] Length = 794 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 99/316 (31%), Positives = 167/316 (52%), Gaps = 30/316 (9%) Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQA-KFSANEITI-LPGKSITTTNFLFAGAKEFP 316 +A+ ++P +S ++ LS + Y A K+ E + LP K T ++AG P Sbjct: 464 YAASYVPG--SSVPTRLSLLSPKNQAYPASKYPGYETLLPLPQKEGTHRFLVYAGPLADP 521 Query: 317 TIHHYEKDLA-----IPRFEMLIDW-GWFYFIAKP----MFMLMSYFYNLVGNFGIAIML 366 T+ +K P++ I + G+F FI +P +F++M +F + G++GI+I+L Sbjct: 522 TLRVLDKAYTNSKGESPQYLDCITFRGFFAFITEPFAALLFIIMKFFRMITGSWGISIIL 581 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 TVF+KLL +PL S M+ + P I E+++K+K+ P + Q ++ LYKT+ +NP Sbjct: 582 LTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKKEPKRA-QMEVMALYKTNKVNP 640 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFG-ILPFYL 484 + GC P+L+Q+P ++ ++ S +R A F GWI +L A D LF P + Sbjct: 641 ITGCLPLLIQLPFLIVMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWTTPVWF 695 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQAMILNWMPVVFVFALSSFPAG 537 G + PI++ + MF Q K+S P D + Q + M ++F F +FP+G Sbjct: 696 LG-NEFHLLPILLGIVMFAQQKISASKKKGPATDQQRQQETMGTMMALLFTFMFYNFPSG 754 Query: 538 LIIYWSWSNVISIVQQ 553 L IYW S ++ ++QQ Sbjct: 755 LNIYWFSSMLLGLIQQ 770 >gi|225620456|ref|YP_002721713.1| putative inner membrane protein [Brachyspira hyodysenteriae WA1] gi|225215275|gb|ACN84009.1| putative inner membrane protein [Brachyspira hyodysenteriae WA1] Length = 624 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 94/335 (28%), Positives = 166/335 (49%), Gaps = 34/335 (10%) Query: 245 FHESNSWLGISDKYWASVFIP--SKETSFH-------SQFKYLSDGH-ARYQAKFSANEI 294 + + W+ ++++Y+A + P S T F S +Y +D H A +K Sbjct: 278 YEGEDKWVALNNRYFAIISSPAQSNNTVFETMTFSKPSTNEYRNDFHVANLMSKH----- 332 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF----MLM 350 TI G SIT +F G K T Y + +E + + +P+ +++ Sbjct: 333 TIKSGSSITDNYSVFMGPKVRRTFSKYYLE---ESYESIFQESFLGLNLRPLTYILDVIL 389 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + YN+ N+ AI+L T KL+ FPL Y S M+ + PKI+ +RE++K +P + Sbjct: 390 NALYNITKNYAWAILLFTFLFKLVTFPLNHASYKSMKKMQLVNPKIERIREQYKDNPDK- 448 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 L ++ +YK INPL GC P+LL P+ A + ++ +E+R+ PF WI DL++ P Sbjct: 449 LNAEIMAIYKKEKINPLGGCLPMLLPFPLLIAFFYLMQSMVELRNTPFL-WITDLSS--P 505 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG------QAMILNWMP 524 +F +P L GF + ++PI+M+L+ ++ MK+ P + M+ P Sbjct: 506 DKLFVFPAGIPI-LGGF-NFNLFPIVMALTSYLSMKLQPSSSAGNSSAAAQMKMMTTIFP 563 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ + +F +GL +YW+ N+ + QQ + K+ Sbjct: 564 LMMLLMFYNFASGLALYWTAQNIFGVAQQFITSKI 598 >gi|160890337|ref|ZP_02071340.1| hypothetical protein BACUNI_02778 [Bacteroides uniformis ATCC 8492] gi|156860069|gb|EDO53500.1| hypothetical protein BACUNI_02778 [Bacteroides uniformis ATCC 8492] Length = 617 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 106/410 (25%), Positives = 195/410 (47%), Gaps = 48/410 (11%) Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 TNN +D I +S R R + K T N E + G+ + Y K+ Sbjct: 198 ATNNYVD-IEWSQRARQI-EKGYTYENRLA--ELTYKITGEGT----DYLSANKNDEKEV 249 Query: 246 HESNSWLGISDKYWASVFIPS---KETSFHSQFKYLSDGHAR-YQAKFSANEITILPGKS 301 E W+ +++++SVF+ ++T S+ + G+ + Y A+ S P Sbjct: 250 PERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQGSGYIKDYSAEMSTK---FDPAGK 306 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM---------LIDWGWFYFIAKPMFMLMSY 352 T F + G + T+ +K ++E+ LI W +F L S+ Sbjct: 307 EPTQLFFYFGPNHYKTLTALDKGRD-EKWELNRLVYLGWPLIRWINKWFTINIFDWLSSW 365 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVL 411 ++ GI ++ T+ VK + FP K Y+S+A M+ ++PKIDE+ +K+ KQ Sbjct: 366 GLSM----GIVLLFMTLIVKAVVFPATWKTYMSSAKMRVLKPKIDEINKKYPKQEDAMKK 421 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R F W DL+ D Sbjct: 422 QQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDA- 479 Query: 472 NIFTLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW---- 522 F PF++P F+ H+ ++ ++M+++ + K D G Q + W Sbjct: 480 -----FINFPFHIP-FLGSHLSLFCLLMTVTNILNTKYMMQQQDTGANPQMAAMKWMSYL 533 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 MP++F+F L+ +P+GL Y+ S ++S+V +IM+ E L+ +L + Sbjct: 534 MPIMFLFILNDYPSGLNYYYFISTLVSVV-TTLIMRKTTNEEALLAQLEA 582 >gi|225434998|ref|XP_002284077.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 455 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 81/253 (32%), Positives = 138/253 (54%), Gaps = 30/253 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ M +++ + + +G AI+L TV VK+ +PL KKQ ST M+ Sbjct: 101 GWFGFISEGMEVVLKVLEDGLTAVHVPYAYGFAIILLTVIVKIATYPLTKKQVESTLAMQ 160 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QPKI ++E++K + ++ Q +LYK +NPLAGC+P L IPV+ +Y+ +S + Sbjct: 161 NLQPKIKAIQERYKGNQERI-QLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 219 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVG--------IWPI 495 + E + WI L PT I + ++PF + G +G + P+ Sbjct: 220 ANEGLLTEGFFWIPSLGG--PTTIAARQSGSGISWLIPF-VDGHPPLGWQDTAAYLVLPV 276 Query: 496 IMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ +S ++ M+ M PP P+ K ++ ++P++ + S P+GL IYW +NV+S Sbjct: 277 LLVISQYVSMELMKPPQTDDPSQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLST 336 Query: 551 VQQAVIMKMHGAE 563 QQ + K+ GA+ Sbjct: 337 AQQVWLRKLGGAK 349 >gi|296134496|ref|YP_003641743.1| membrane protein insertase, YidC/Oxa1 family [Thermincola sp. JR] gi|296033074|gb|ADG83842.1| membrane protein insertase, YidC/Oxa1 family [Thermincola potens JR] Length = 228 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 121/226 (53%), Gaps = 40/226 (17%) Query: 346 MFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 M L+ +FY L + N+G+AI+L TV +K+L PL KQ S + +QPK+ E++ Sbjct: 8 MTALLEFFYKLTVSMGIPNYGLAIILITVLIKMLLLPLTIKQMKSLKMTQQLQPKVKEIQ 67 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR------ 454 EK+K P+ Q+A+++LYK + NPL+GC P+LLQ+P+ A+Y+ + M+ Sbjct: 68 EKYKD--PKQAQQAIMELYKQYGANPLSGCLPLLLQMPIIIALYRAL-----MKFPYTNE 120 Query: 455 -HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 HA F WI +L+ D + PI+ L+ ++ +M+ D Sbjct: 121 AHAKFL-WISNLSQHDKI--------------------VLPILAVLTTYLLQRMTTNMQD 159 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + Q +L MP+ + SFPAGL +YW +N++ +QQ I KM Sbjct: 160 QTQKTMLIVMPLFIGWLSMSFPAGLALYWVVTNLVGAIQQYFINKM 205 >gi|332143491|ref|YP_004429229.1| inner membrane protein, 60 kDa [Alteromonas macleodii str. 'Deep ecotype'] gi|327553513|gb|AEB00232.1| inner membrane protein, 60 kDa [Alteromonas macleodii str. 'Deep ecotype'] Length = 441 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 95/379 (25%), Positives = 184/379 (48%), Gaps = 17/379 (4%) Query: 64 ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE 123 A S + +E+K +L I+L G +L + ++ S+ P +LL N Y A+ Sbjct: 72 AQSTNRIIEVKTDTLDLRIDLLGGDVISADLLKFPVEQGSDIPY-SLLRSGN--GLYVAQ 128 Query: 124 LDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVFKNANNILFERTISLDE-HYLF 180 + N V+ S ++ T I L +KN + +T + + HY Sbjct: 129 SGLIGAQGPDASANGRPVYTAQSEFYEMTGDTLVIPLTWKNNQGLSITKTFTFTKNHYDV 188 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIE 238 + + N + P ++ + + + N F G D + + +IE Sbjct: 189 NVSYDINNGTGSAATVQPYAQLKQVMEFEDDGNMFMPTYRGAAYSTEDDRYQKYSFDEIE 248 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 ++ ++ W+G+ + Y+ S ++PS+E + + L + +A S +E T+ Sbjct: 249 DDNLRETTKAG-WVGMLEHYFVSAWVPSQEQTNTVYSRNLKNQYAVI-GVLSPSE-TVAS 305 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G + T + L+ G K+ + + L ++ +D+G ++I++P+F L+++ ++LV Sbjct: 306 GDTKTIASTLYMGPKDQDKLAKIARGL-----DLTVDYGILFWISQPLFALLTFLHSLVN 360 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+L T+ VK + L KKQY S A M+N+ PK+ +L+++F Q + +AM++L Sbjct: 361 NWGVAIILITIVVKGAMYWLTKKQYESMARMRNLAPKMQQLKDRFGDD-RQKMSQAMMEL 419 Query: 419 YKTHNINPLAGCWPILLQI 437 Y+ +NP+ GC P+LLQ Sbjct: 420 YRKEKVNPMGGCLPLLLQC 438 >gi|196249190|ref|ZP_03147889.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16] gi|196211419|gb|EDY06179.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16] Length = 249 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 123/226 (54%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ PM L+ F + G N+GIAI++ T+ V+ PL KQ+ ++ M+ ++P++ Sbjct: 32 WNHYFVYPMSKLLLTFGHWFGDNYGIAIIVLTLIVRFCLLPLILKQFRTSIAMQKLRPEL 91 Query: 397 DELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+K P+ LQ+ M+QLY+ H INP +GC P+L+Q+P+F A+Y IS + E+ Sbjct: 92 LKLQEKYKSKDPETQRKLQQEMVQLYQKHGINPASGCLPVLIQMPIFMALYYAISRTQEI 151 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W+ +L DP I PI+ +L+ F+ +++SP + Sbjct: 152 KTHSFL-WV-ELGHRDPYFIL-------------------PILAALTTFLSLRLSPSMTE 190 Query: 514 K---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+ MPV+ SS P+ L +YW SI+Q ++ Sbjct: 191 EQMPQMAMMSYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLML 236 >gi|138895363|ref|YP_001125816.1| stage III sporulation protein J [Geobacillus thermodenitrificans NG80-2] gi|134266876|gb|ABO67071.1| Stage III sporulation protein J [Geobacillus thermodenitrificans NG80-2] Length = 249 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 123/226 (54%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ PM L+ F + GN +GIAI++ T+ V+ PL KQ+ ++ M+ ++P++ Sbjct: 32 WNHYFVYPMSKLLLTFGHWFGNNYGIAIIVLTLIVRFCLLPLILKQFRTSIAMQKLRPEL 91 Query: 397 DELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+K P+ LQ+ M+QLY+ H INP +GC P+L+Q+P+F A+Y IS + E+ Sbjct: 92 LKLQEKYKSKDPETQRKLQQEMVQLYQKHGINPASGCLPVLIQMPIFMALYYAISRTQEI 151 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W+ +L DP I PI+ +L+ F+ +++SP + Sbjct: 152 KTHSFL-WV-ELGHRDPYFIL-------------------PILAALTTFLSLRLSPSMTE 190 Query: 514 K---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+ MPV+ SS P+ L +YW SI+Q ++ Sbjct: 191 EQMPQMAMMSYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLML 236 >gi|116514957|ref|YP_802586.1| hypothetical protein BCc_007 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256811|gb|ABJ90493.1| preprotein translocase, membrane component [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 285 Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 123/221 (55%), Gaps = 20/221 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G + IA P+F L+++FY N+GIAI+ T+ +K++ +PL K QY S MK +QPK Sbjct: 76 YGKLHIIAYPLFHLLNFFYKFFNNWGIAIIFVTILIKIIIYPLTKLQYTSVLQMKLLQPK 135 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 ID L+ K+ + + + K +++LY + NP + L+Q P+F A Y V+S S+E+++ Sbjct: 136 IDILKNKYADNKDK-MNKKILELYSSKKFNPFNSFFSFLIQTPIFLAFYSVLSSSVELKN 194 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 APF+ WIKDL++ DP ++ P++M +S+ + Sbjct: 195 APFFLWIKDLSSYDPYHVL-------------------PLLMGISILLTQISEIDDKTTR 235 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + L++ V F FP+GLI+Y+ SN+++++Q I Sbjct: 236 KRKFLSFFSVFFAAFFLWFPSGLILYYITSNIVTLIQHWFI 276 >gi|297746102|emb|CBI16158.3| unnamed protein product [Vitis vinifera] Length = 451 Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 81/253 (32%), Positives = 138/253 (54%), Gaps = 30/253 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ M +++ + + +G AI+L TV VK+ +PL KKQ ST M+ Sbjct: 97 GWFGFISEGMEVVLKVLEDGLTAVHVPYAYGFAIILLTVIVKIATYPLTKKQVESTLAMQ 156 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QPKI ++E++K + ++ Q +LYK +NPLAGC+P L IPV+ +Y+ +S + Sbjct: 157 NLQPKIKAIQERYKGNQERI-QLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 215 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVG--------IWPI 495 + E + WI L PT I + ++PF + G +G + P+ Sbjct: 216 ANEGLLTEGFFWIPSLGG--PTTIAARQSGSGISWLIPF-VDGHPPLGWQDTAAYLVLPV 272 Query: 496 IMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ +S ++ M+ M PP P+ K ++ ++P++ + S P+GL IYW +NV+S Sbjct: 273 LLVISQYVSMELMKPPQTDDPSQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLST 332 Query: 551 VQQAVIMKMHGAE 563 QQ + K+ GA+ Sbjct: 333 AQQVWLRKLGGAK 345 >gi|326336217|ref|ZP_08202389.1| inner membrane protein OxaA [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691726|gb|EGD33693.1| inner membrane protein OxaA [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 616 Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 79/263 (30%), Positives = 143/263 (54%), Gaps = 25/263 (9%) Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK----PMFMLMSYFYNL 356 I+ + + G ++ + Y+K+ + + + + WG F +I K P+F +S F ++ Sbjct: 311 EISESLHFYYGPSDYHLLKKYDKEYELTK-AIPLGWGIFGWINKWFVIPVFDFLSKFMSM 369 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQVLQKAM 415 G+AI++ T+ V++L P+ K Y+S A MK ++P+I+E+ K+K Q Q+ Sbjct: 370 ----GLAIIVLTIIVRILLSPVQYKSYLSQAKMKVLRPEIEEINNKYKGQENAMKRQQET 425 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY +NPL+GC P LLQ+PVFFA++ + +R F W DL++ D Sbjct: 426 MALYSKAGVNPLSGCIPALLQMPVFFALFSFFPTAFMLRQESFL-WANDLSSYDS----- 479 Query: 476 LFGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSP----PPADKGQAMILNWM---PVVF 527 LPF +P + HV ++PI+ S+++ I M M+ P +G + M P++ Sbjct: 480 -IAQLPFSIPFYGNHVSLFPILASVTLLIYMLMTAGQTQQPQQEGMPNMKFMMYISPLMM 538 Query: 528 VFALSSFPAGLIIYWSWSNVISI 550 +F +++ +GL +Y+ SN+I+I Sbjct: 539 LFFFNNYASGLSLYYFISNLITI 561 >gi|329942824|ref|ZP_08291603.1| 60Kd inner membrane family protein [Chlamydophila psittaci Cal10] gi|332287416|ref|YP_004422317.1| putative inner membrane protein translocase component YidC [Chlamydophila psittaci 6BC] gi|313847996|emb|CBY16993.1| putative lipoprotein [Chlamydophila psittaci RD1] gi|325506880|gb|ADZ18518.1| putative inner membrane protein translocase component YidC [Chlamydophila psittaci 6BC] gi|328815084|gb|EGF85073.1| 60Kd inner membrane family protein [Chlamydophila psittaci Cal10] gi|328914664|gb|AEB55497.1| Inner membrane protein oxaA [Chlamydophila psittaci 6BC] Length = 794 Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 92/282 (32%), Positives = 151/282 (53%), Gaps = 26/282 (9%) Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE--MLIDW----GWFYFIAKP----M 346 LP + T ++AG PT+ ++ P E +D G F FI +P + Sbjct: 502 LPKEEGTYRFLVYAGPLAEPTLKALDQAYTNPNGENPQYLDCITFRGLFAFITEPFAALL 561 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F + G++GI+I+L TVF+KLL +PL S M+ + P I E+++K+K+ Sbjct: 562 FIIMKFFKMITGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKKE 621 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + Q ++ LYKT+ +NP+ GC P+L+Q+P A++ ++ S +R A F GWI +L Sbjct: 622 PKRA-QMEVMALYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNL 680 Query: 466 AAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQA 517 A D LF P + G + PI++ + MF+Q K+S P D + Q Sbjct: 681 TAPD-----VLFSWTTPVWFIG-NEFHLLPILLGIVMFVQQKLSALKKKGPVTDQQRQQE 734 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + M ++F F +FP+GL IYW S ++ ++QQ V K+ Sbjct: 735 AMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGLIQQWVTNKI 776 >gi|229099913|ref|ZP_04230836.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-29] gi|229118976|ref|ZP_04248321.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-3] gi|228664501|gb|EEL19997.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-3] gi|228683528|gb|EEL37483.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-29] Length = 255 Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 78/224 (34%), Positives = 122/224 (54%), Gaps = 32/224 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF L G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFAELFGKNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK Q+ Q LQ+ M+QLY+ + INPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKHSSKDQATQQKLQQEMMQLYQKNGINPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I P++ +++ FIQ K++ Sbjct: 156 SKHTFLW---FDLGQAD-----------PYY--------ILPVVAAITTFIQQKLA-MAG 192 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 GQ AM++ MP++ + +FPA L +YW N+ I Q Sbjct: 193 TAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQ 236 >gi|313674427|ref|YP_004052423.1| membrane protein insertase, yidc/oxa1 family [Marivirga tractuosa DSM 4126] gi|312941125|gb|ADR20315.1| membrane protein insertase, YidC/Oxa1 family [Marivirga tractuosa DSM 4126] Length = 617 Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 95/303 (31%), Positives = 157/303 (51%), Gaps = 23/303 (7%) Query: 264 IPSKETSFHSQFKYLSDGHA-RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 IP K F + + LSD + R +AK EI + + + G + T+ Sbjct: 280 IPMKRAEFATDIEDLSDEYVKRGKAKV---EIPLSEVSNRAGEFKYYFGPNNYKTLQK-- 334 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL---VGNFGIAIMLTTVFVKLLFFPLA 379 P FE + GWF +++++ FY L + ++G I++ + +KL PL+ Sbjct: 335 ---VAPDFEENVYLGWFPISLVNKYVIINVFYILEKYISSYGWIIIILVLLIKLALSPLS 391 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K YVS A K ++P++DE++EK Q Q + LY+ +NPL+GC P+LLQ+P+ Sbjct: 392 YKSYVSMAKTKVLKPQLDEIKEKHG-GDMQKAQADQMDLYRKVGVNPLSGCIPLLLQMPI 450 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 FA++ S+E+R F W DL+ D ++ +L +PFY HV ++ I+M+L Sbjct: 451 LFAMFYFFPSSIELRQESFL-WATDLSTYD--SVLSLPFEIPFYGD---HVSLFTILMTL 504 Query: 500 SMFIQMKMSPPPADKGQAMILN---WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 S + + S Q + N +MPV+F+F L+SFPA L Y+ +N+I+ QQ +I Sbjct: 505 STLL-ITWSQGQVSSVQGPMKNIQYFMPVIFMFVLNSFPAALSFYYLIANLITFGQQTLI 563 Query: 557 MKM 559 +M Sbjct: 564 RRM 566 >gi|261420019|ref|YP_003253701.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC61] gi|297530020|ref|YP_003671295.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. C56-T3] gi|319766834|ref|YP_004132335.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC52] gi|261376476|gb|ACX79219.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC61] gi|297253272|gb|ADI26718.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. C56-T3] gi|317111700|gb|ADU94192.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC52] Length = 249 Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 123/226 (54%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ PM L+ + G N+GIAI++ T+ V+ PL KQ+ ++ M+ ++P++ Sbjct: 32 WNHYFVYPMSKLLLTLGHWFGDNYGIAIIVLTLIVRFCLLPLILKQFRASLAMQKLRPEL 91 Query: 397 DELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+K P+ LQ+ M+QLY+ H +NP +GC P+L+Q+P+F A+Y IS + E+ Sbjct: 92 LKLQEKYKSKDPETQRKLQQEMMQLYQKHGVNPASGCLPVLIQMPIFMALYYAISRTQEI 151 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W+ +L DP I P++ +L+ FI +++SP A+ Sbjct: 152 KTHSFL-WV-ELGHRDPYFIL-------------------PVLAALTTFISLRLSPSMAE 190 Query: 514 K---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+ MPV+ SS P+ L +YW SI+Q ++ Sbjct: 191 EQMPQMAMMSYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLIL 236 >gi|301056511|ref|YP_003794722.1| OxaA-like protein precursor [Bacillus anthracis CI] gi|300378680|gb|ADK07584.1| OxaA-like protein precursor [Bacillus cereus biovar anthracis str. CI] Length = 260 Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 131/235 (55%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ + PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSVMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 100 LKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSTFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNST 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 199 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 253 >gi|149277802|ref|ZP_01883942.1| putative inner membrane protein translocase component YidC [Pedobacter sp. BAL39] gi|149231490|gb|EDM36869.1| putative inner membrane protein translocase component YidC [Pedobacter sp. BAL39] Length = 598 Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 77/239 (32%), Positives = 129/239 (53%), Gaps = 13/239 (5%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 E L+D G++ F+++ F L G N+G+ I++ T+ +K+ PL K Y S A Sbjct: 323 EKLVDMGYWPLKYINRFVVLPVFKFLEGFGWNYGLIILVLTIMLKVAMSPLTYKSYTSMA 382 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ ++P++DE++ K + P +LQ+ ++LYK +NPL GC P+LLQ+P A + Sbjct: 383 KMRILKPEMDEIKAKVGEDNPTLLQQEYLKLYKQVGVNPLGGCLPMLLQLPFVMAFFFFF 442 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGI-LPFYLPGFMHVGIWPIIMSLSMFIQMK 506 E+R F W+KDL+ D F FG LPF H+ + ++M++S I Sbjct: 443 PNLFELRGESFL-WMKDLSTYDD---FIKFGFTLPFIGD---HLSLMCVLMTISTLIYTY 495 Query: 507 MSPP-PADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + GQ + + MP+VF+ L+S+P+GL Y+ +N+++ QQ +I M E Sbjct: 496 FNNQISGATGQMKYIGYIMPIVFLGVLNSYPSGLNYYYFLANMLTFAQQFLIKSMVDDE 554 >gi|326943284|gb|AEA19180.1| OxaA-like protein precursor [Bacillus thuringiensis serovar chinensis CT-43] Length = 255 Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 123/224 (54%), Gaps = 32/224 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFATWLGDNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I P++ +++ FIQ K++ Sbjct: 156 SKHTFLW---FDLGQAD-----------PYY--------ILPVVAAITTFIQQKLA-MAG 192 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 GQ AM++ MP++ + +FPA L +YW N+ I Q Sbjct: 193 TAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQ 236 >gi|239828709|ref|YP_002951333.1| OxaA-like protein precursor [Geobacillus sp. WCH70] gi|239809002|gb|ACS26067.1| 60 kDa inner membrane insertion protein [Geobacillus sp. WCH70] Length = 256 Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 80/224 (35%), Positives = 118/224 (52%), Gaps = 32/224 (14%) Query: 338 WFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L+ Y N L GNFG++I++ T+F++LL PL +Q + M+ +QP+I Sbjct: 37 WNEYIVYPLSWLIKYVANALGGNFGLSIVIVTIFIRLLILPLMIQQTKNAKAMQALQPEI 96 Query: 397 DELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+ Y I + E+ Sbjct: 97 QKLREKYSSKDMQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPILIGFYHAIMRTREI 156 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 F W DL DP I PI+ ++ FIQ K+ A Sbjct: 157 AEHNFL-WF-DLGEKDPYFIL-------------------PIVAGITTFIQQKIM--MAG 193 Query: 514 KGQ-----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 GQ AM+L MPV+ V +FPA L +YW N+ SIVQ Sbjct: 194 AGQQNPQMAMMLWMMPVMIVIFAINFPAALSLYWVVGNIFSIVQ 237 >gi|206970374|ref|ZP_03231327.1| stage III sporulation protein J [Bacillus cereus AH1134] gi|206734951|gb|EDZ52120.1| stage III sporulation protein J [Bacillus cereus AH1134] Length = 255 Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 121/223 (54%), Gaps = 30/223 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +L N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + + Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 F W DL AD PFY I P++ +++ FIQ K++ Sbjct: 156 SEHTFL-WF-DLGQAD-----------PFY--------ILPVVAAITTFIQQKLA-MAGT 193 Query: 514 KGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 GQ AM+L MP++ + +FPA L +YW N+ I Q Sbjct: 194 AGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQ 236 >gi|329961447|ref|ZP_08299552.1| membrane protein insertase, YidC/Oxa1 family domain protein [Bacteroides fluxus YIT 12057] gi|328531795|gb|EGF58621.1| membrane protein insertase, YidC/Oxa1 family domain protein [Bacteroides fluxus YIT 12057] Length = 616 Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 166/333 (49%), Gaps = 31/333 (9%) Query: 250 SWLGISDKYWASVFIPS---KETSFHSQFKYLSDGHAR-YQAKFSANEITILPGKSITTT 305 W+ +++++SVF+ ++ S+ + G+ + Y A+ S P T Sbjct: 253 DWIAFKNQFFSSVFLADADFEKAKIASKMEPQGSGYIKDYSAEMSTR---FDPTGKEATQ 309 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVG---NF 360 F + G + T+ +K ++E+ L+ GW + ++ F L G Sbjct: 310 LFFYFGPNHYKTLTALDKGRD-EKWELNRLVYLGWPVVRQINQWFTINIFDWLSGWGLGM 368 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLY 419 GI ++L T+ VK + FP K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY Sbjct: 369 GIVLLLMTLIVKAVVFPATWKTYMSSAKMRVLKPKIDEINKKYPKQEDAMKKQQEVMGLY 428 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 + ++P+ GC P+L+Q P+ A++ + ++E+R F W DL+ D F Sbjct: 429 SQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDA------FIN 481 Query: 480 LPFYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFVFA 530 PF++P F+ H+ ++ ++M+++ + K D G Q + W MP++F+F Sbjct: 482 FPFHIP-FLGSHLSLFCLLMTVTNILNTKYMMQQQDTGANPQMAAMKWMSYLMPIMFLFV 540 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 L+ +P+GL Y+ S +IS+V ++ K E Sbjct: 541 LNDYPSGLNYYYFISTLISVVTTLIMRKTTNEE 573 >gi|218900627|ref|YP_002449038.1| stage III sporulation protein J [Bacillus cereus G9842] gi|228911326|ref|ZP_04075130.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 200] gi|218544253|gb|ACK96647.1| stage III sporulation protein J [Bacillus cereus G9842] gi|228848344|gb|EEM93194.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 200] Length = 255 Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 121/223 (54%), Gaps = 30/223 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +L N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + + Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 F W DL AD PFY I P++ +++ FIQ K++ Sbjct: 156 SEHTFL-WF-DLGQAD-----------PFY--------ILPVVAAITTFIQQKLA-MAGT 193 Query: 514 KGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 GQ AM+L MP++ + +FPA L +YW N+ I Q Sbjct: 194 AGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQ 236 >gi|229106081|ref|ZP_04236693.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-28] gi|228677336|gb|EEL31601.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-28] Length = 246 Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 123/224 (54%), Gaps = 32/224 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFATWLGDNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 146 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I P++ +++ FIQ K++ Sbjct: 147 SKHTFLW---FDLGQAD-----------PYY--------ILPVVAAITTFIQQKLA-MAG 183 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 GQ AM++ MP++ + +FPA L +YW N+ I Q Sbjct: 184 TAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQ 227 >gi|228942635|ref|ZP_04105167.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975565|ref|ZP_04136117.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982201|ref|ZP_04142490.1| Membrane protein oxaA 1 [Bacillus thuringiensis Bt407] gi|228777553|gb|EEM25831.1| Membrane protein oxaA 1 [Bacillus thuringiensis Bt407] gi|228784175|gb|EEM32202.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817061|gb|EEM63154.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 246 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 123/224 (54%), Gaps = 32/224 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFATWLGDNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 146 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I P++ +++ FIQ K++ Sbjct: 147 SKHTFLW---FDLGQAD-----------PYY--------ILPVVAAITTFIQQKLA-MAG 183 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 GQ AM++ MP++ + +FPA L +YW N+ I Q Sbjct: 184 TAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQ 227 >gi|228905430|ref|ZP_04069385.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 4222] gi|228968638|ref|ZP_04129621.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar sotto str. T04001] gi|228791067|gb|EEM38685.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar sotto str. T04001] gi|228854250|gb|EEM98953.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 4222] Length = 246 Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 121/223 (54%), Gaps = 30/223 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +L N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + + Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 F W DL AD PFY I P++ +++ FIQ K++ Sbjct: 147 SEHTFL-WF-DLGQAD-----------PFY--------ILPVVAAITTFIQQKLA-MAGT 184 Query: 514 KGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 GQ AM+L MP++ + +FPA L +YW N+ I Q Sbjct: 185 AGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQ 227 >gi|310830139|ref|YP_003962496.1| 60 kDa inner membrane insertion protein [Eubacterium limosum KIST612] gi|308741873|gb|ADO39533.1| 60 kDa inner membrane insertion protein [Eubacterium limosum KIST612] Length = 307 Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 120/225 (53%), Gaps = 32/225 (14%) Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 YN V N+G+A++L T+ VK PL KQ S M+ +QP++ +L++K+K +P ++ Q+ Sbjct: 16 YNFVQNYGVAVILFTILVKFCILPLNIKQTKSMREMQALQPELQKLQKKYKNNPEKLNQE 75 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIY--------------KVISISLEMRHAPFW 459 M +LYK +N++P+AGC P+L+Q+P+ +A++ V +IS + + Sbjct: 76 TM-KLYKLYNVSPMAGCLPLLIQLPIIYALFGALRDPGKWVFTNGDVSAISQQ------F 128 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL DP I + ++ + I +M +Q P A+K Q M+ Sbjct: 129 LWIPDLGNPDPWYILPILCVVFTF-----------ITQKFTMSVQKGTMDPSAEKTQNMM 177 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 L MP+ FA PAG+ +YW NV + VQQ ++++ +I Sbjct: 178 LYIMPIFIGFAAIGMPAGVALYWVVQNVFTFVQQFIMLRKPAEKI 222 >gi|49480363|ref|YP_039040.1| OxaA-like protein precursor [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331919|gb|AAT62565.1| probable stage III sporulation protein J [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 260 Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 130/235 (55%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 100 LKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSTFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNST 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 199 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 253 >gi|229007352|ref|ZP_04164950.1| Membrane protein oxaA 2 [Bacillus mycoides Rock1-4] gi|228753883|gb|EEM03323.1| Membrane protein oxaA 2 [Bacillus mycoides Rock1-4] Length = 260 Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 130/240 (54%), Gaps = 33/240 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ +++ + + V G+FGIAI++ T+ V+ PLA QY S MK +QP+ Sbjct: 37 WDHYFVYPISLMLQFVAHHVPGGSFGIAIIIITLLVRSAMIPLAVSQYRSQMKMKKMQPQ 96 Query: 396 IDELREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L+EK + QK M +L KT NPLAGC P+L+Q+P+F A+Y IS + Sbjct: 97 MQKLKEKHGDVSKDIEKQKQYQKEMSELMKTGGWNPLAGCLPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + F W+ +L ADP +I PI+ +L+ FIQMK+ Sbjct: 157 EEIRTSSFL-WV-NLGHADPYHIL-------------------PILAALATFIQMKVMQS 195 Query: 508 SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + P ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E G Sbjct: 196 NVTPGEQVQMLKVQQFMMPAMILFMGFAAPSGLVLYWITGNIFTMLQTIVLRKVMDREEG 255 >gi|218296522|ref|ZP_03497250.1| 60 kDa inner membrane insertion protein [Thermus aquaticus Y51MC23] gi|218243064|gb|EED09596.1| 60 kDa inner membrane insertion protein [Thermus aquaticus Y51MC23] Length = 430 Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 43/306 (14%) Query: 264 IPSKETSFH---------SQFKYLSDGHARYQAKFSA--NEITILPGKSITTTNFLFAGA 312 +PS E F + + ++ G + K E+ + PG+ + ++ G Sbjct: 150 LPSGEGQFRYLAWQTRPKAGYALVAFGEGPLEGKLVGKEGEVRLPPGREVK----VYGGQ 205 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 E H E LA+P WG ++ + LM + G++G+AI+ T+ V+ Sbjct: 206 NEL-VRFHVEGLLALPGLFTPNLWGQ---LSLGLLWLMEMAFRYTGSWGLAILFLTLVVR 261 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 LL +PL +Q+ S A M+ +QP I ++ EK+K P + + M +LY+ H +NP AGC P Sbjct: 262 LLLWPLMHQQFKSMAEMQRLQPLIQKINEKYKDDPNKRAEATM-KLYQEHKVNPAAGCLP 320 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 + +Q+P+ F ++KVI+ + E WI DLA DP I + + L ++ Sbjct: 321 LFIQMPILFILWKVIA-NYEFGQGLL--WIPDLALPDPYYILPVLYVASTLLSTWLSAHG 377 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 I+ +FI + +FVF + FPAG+ +YW SN+I + Q Sbjct: 378 NKDIIRQGLFINL--------------------IFVFLVLQFPAGVTLYWVLSNLIGLFQ 417 Query: 553 QAVIMK 558 Q +I K Sbjct: 418 QWLINK 423 >gi|52140514|ref|YP_086317.1| OxaA-like protein precursor [Bacillus cereus E33L] gi|196040458|ref|ZP_03107758.1| stage III sporulation protein J [Bacillus cereus NVH0597-99] gi|51973983|gb|AAU15533.1| probable stage III sporulation protein J [Bacillus cereus E33L] gi|196028590|gb|EDX67197.1| stage III sporulation protein J [Bacillus cereus NVH0597-99] Length = 260 Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 130/235 (55%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 100 LKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSTFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNST 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 199 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 253 >gi|228999798|ref|ZP_04159371.1| Membrane protein oxaA 2 [Bacillus mycoides Rock3-17] gi|228759947|gb|EEM08920.1| Membrane protein oxaA 2 [Bacillus mycoides Rock3-17] Length = 260 Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 130/240 (54%), Gaps = 33/240 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ +++ + + V G+FGIAI++ T+ V+ PLA QY S MK +QP+ Sbjct: 37 WDHYFVYPISLMLQFVAHHVPGGSFGIAIIIITLLVRSAMIPLAVSQYRSQMKMKKMQPQ 96 Query: 396 IDELREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L+EK + QK M +L KT NPLAGC P+L+Q+P+F A+Y IS + Sbjct: 97 MQKLKEKHGDVSKDIEKQKQYQKEMSELMKTGGWNPLAGCLPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + F W+ +L ADP +I PI+ +L+ FIQMK+ Sbjct: 157 EEIRTSSFL-WV-NLGHADPYHIL-------------------PILAALATFIQMKVMQS 195 Query: 508 SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + P ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E G Sbjct: 196 NVTPGEQVQMLKVQQFMMPAMILFMGFAAPSGLVLYWITGNIFTMLQTIVLRKVMDREEG 255 >gi|319954150|ref|YP_004165417.1| protein translocase subunit yidc [Cellulophaga algicola DSM 14237] gi|319422810|gb|ADV49919.1| protein translocase subunit yidC [Cellulophaga algicola DSM 14237] Length = 618 Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 86/311 (27%), Positives = 157/311 (50%), Gaps = 21/311 (6%) Query: 251 WLGISDKYWASVFI---PSKETSFHSQFKYLSDGHARYQAKFSANEITI-LPGKSITTTN 306 WL +++S+ P + S+ + H + K A+E+ + L G ++ Sbjct: 265 WLSYRQHFFSSILATNKPFESAKLFSKNLVEDESHTQKYMKDYASEMPLKLEGGELSYAM 324 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 + G + + Y KDL + + WG F I + +F + F + + GIAI++ Sbjct: 325 NWYYGPTDAKVLAQY-KDLGLED-SVPFGWGIFGLINRYVFTPLFTFLSGMVPAGIAIII 382 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 T+ V+L P+ K Y+S A MK ++P+I E+ EK+K + + Q+ M +L ++P Sbjct: 383 MTILVRLAMSPVTYKSYLSQAKMKVLKPEIAEINEKYKDNAAKKQQETM-KLNTKAGVSP 441 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 L+GC P L+Q+P+F+A++ S +R PF W DL++ D + LPF +P Sbjct: 442 LSGCIPALIQMPIFYALFMFFPTSFALRQKPFL-WADDLSSYD------VIAQLPFTIPF 494 Query: 487 FM-HVGIWPIIMSLSMFIQM------KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 + HV ++PI+ S+++F M M+ P I+ P++ + +S+ +GL Sbjct: 495 YGDHVSLFPILASIAIFFYMMMTTGQNMTQQPGMPNMKFIMYLSPLMMLVFFNSYASGLS 554 Query: 540 IYWSWSNVISI 550 +Y+ SN+I+I Sbjct: 555 LYYFISNLITI 565 >gi|229094136|ref|ZP_04225216.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-42] gi|228689239|gb|EEL43060.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-42] Length = 262 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 130/235 (55%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 42 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 101 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 102 LKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 162 RTSTFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNST 200 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 201 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 255 >gi|228948751|ref|ZP_04111028.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810883|gb|EEM57227.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 262 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 79/235 (33%), Positives = 129/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 42 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 101 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 102 LKQKYGEVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 162 RTSTFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNST 200 Query: 514 KG-QAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 G Q +L MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 201 SGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 255 >gi|89898342|ref|YP_515452.1| putative inner membrane protein translocase component YidC [Chlamydophila felis Fe/C-56] gi|89331714|dbj|BAE81307.1| inner membrane protein [Chlamydophila felis Fe/C-56] Length = 794 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 98/316 (31%), Positives = 167/316 (52%), Gaps = 30/316 (9%) Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQA-KFSANEITI-LPGKSITTTNFLFAGAKEFP 316 +A+ ++P +S ++ LS + Y A K+ E + LP + T ++AG P Sbjct: 464 YAASYVPG--SSVPTRLSLLSPKNQAYPASKYPGYETLLPLPKQEGTYRFLVYAGPLAEP 521 Query: 317 TIHHYEKDLA-----IPRFEMLIDW-GWFYFIAKP----MFMLMSYFYNLVGNFGIAIML 366 T+ ++ P++ I + G F FI +P +F++M +F + G++GI+I+L Sbjct: 522 TLRALDQAYTNSKGESPQYLDCITFRGIFAFITEPFAALLFIIMKFFRMITGSWGISIIL 581 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 TVF+KLL +PL S M+ + P I E+++K+K+ P + Q ++ LYKT+ +NP Sbjct: 582 LTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKKEPKRA-QMEVMALYKTNKVNP 640 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFG-ILPFYL 484 + GC P+L+Q+P A++ ++ S +R A F GWI +L A D LF P + Sbjct: 641 ITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWTTPVWF 695 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMS-----PPPAD--KGQAMILNWMPVVFVFALSSFPAG 537 G + PI++ + MF Q K+S P D + Q + M ++F F +FP+G Sbjct: 696 IG-NEFHLLPILLGIVMFAQQKLSALKRKAPVTDQQRQQEAMGTMMALLFTFMFYNFPSG 754 Query: 538 LIIYWSWSNVISIVQQ 553 L IYW S ++ ++QQ Sbjct: 755 LNIYWFSSMLLGLIQQ 770 >gi|284049399|ref|YP_003399738.1| membrane protein insertase, YidC/Oxa1 family [Acidaminococcus fermentans DSM 20731] gi|283953620|gb|ADB48423.1| membrane protein insertase, YidC/Oxa1 family [Acidaminococcus fermentans DSM 20731] Length = 207 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 114/205 (55%), Gaps = 30/205 (14%) Query: 355 NLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 L+G ++G+AI++ T+ +KL+ PL KQ ST M IQPK+ EL+ ++K + Q Sbjct: 20 RLIGEPSYGLAIIIMTILIKLILSPLTAKQIASTRAMSRIQPKMKELQARYKDDKVTLNQ 79 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 K M +LYK+ +NPLAGC P+L+Q+P+ I F+G I+D A P++ Sbjct: 80 K-MSELYKSEGVNPLAGCLPLLIQMPIMIGI--------------FYG-IRDFQYAGPSS 123 Query: 473 IFTLFGIL---PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI-LNWMPVVFV 528 + I P+Y I PI+ +L+ FIQ K + PP+D Q I L +MP+ Sbjct: 124 FLWMQSIADPDPYY--------ILPILSALTTFIQSKQTMPPSDNPQGKIMLYFMPLFIG 175 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQ 553 + FPAGL++YW N++ I QQ Sbjct: 176 YISLKFPAGLVLYWVVMNIMQIGQQ 200 >gi|149372149|ref|ZP_01891419.1| putative inner membrane protein translocase component YidC [unidentified eubacterium SCB49] gi|149354916|gb|EDM43478.1| putative inner membrane protein translocase component YidC [unidentified eubacterium SCB49] Length = 628 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 87/322 (27%), Positives = 164/322 (50%), Gaps = 28/322 (8%) Query: 250 SWLGISDKYWASVFI---PSKETSFHSQFKYLSDGHAR--YQAKFSANEITILPGKSITT 304 SW+ +++S+ + P KE S + D Y + A + G +++ Sbjct: 273 SWMNFRQHFFSSMLLTGDPFKEVKLSS-IDLVEDEEVDTVYTKHYGAKMLLTPKGGALSY 331 Query: 305 TNFLFAGAKEFPTIHHYEKDL--AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 ++ G ++ Y+++L A+P + WG F I K + + F + + GI Sbjct: 332 NMNMYYGPTDYKIFKKYDRNLDEAMP-----LGWGIFGVINKYFIIPLYGFLSTYLSAGI 386 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI++ T+ +KLL + KQY++ A MK ++P+ID ++EKF + ++ Q+ M +L Sbjct: 387 AIIVMTILIKLLLSFVQYKQYLAQAKMKVLKPEIDAIKEKFGDNKMKIQQETM-KLQNIA 445 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +PL GC P +LQIPVF+A++ ++++R F W DL++ D ++ L +PF Sbjct: 446 GASPLKGCLPAILQIPVFYALFTFFPTAIDLRQKSFL-WADDLSSFD--SVINLPFTIPF 502 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ--------AMILNWMPVVFVFALSSF 534 Y HV ++PI+ S+++FI M M+ + + Q ++ P+ + +++ Sbjct: 503 YGD---HVSLFPILASIAIFIYMTMTMGQSMQAQQQPGMPNMKFLMYLSPLFMLVFFNNY 559 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 +GL +Y+ SN+I+I VI Sbjct: 560 ASGLSLYYFISNLITIGIMLVI 581 >gi|255534414|ref|YP_003094785.1| OxaI/YidC membrane insertion protein [Flavobacteriaceae bacterium 3519-10] gi|255340610|gb|ACU06723.1| OxaI/YidC membrane insertion protein [Flavobacteriaceae bacterium 3519-10] Length = 604 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 124/510 (24%), Positives = 235/510 (46%), Gaps = 68/510 (13%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNL---RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 +V+LKN L S++ G Q + L + Y+ +N + L +N+ + + Sbjct: 76 QVQLKNKELTLSVSSLGGQISTVQLNEYKAYNRKTDANDKELLLFDKNNSTYGFQFKDKT 135 Query: 127 VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDT 185 T N +L + TPT +N N + + ++ +++ ++D Sbjct: 136 GKTFNTKDL-------------VFTPT-------QNGNTVTMQANVNGAVIQFIYTLLDK 175 Query: 186 VTNNSID-QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS-------DI 237 T +D ++ +++ + T F +E +++ E YS D Sbjct: 176 YT---VDFNVKTQGLSQLVSDQKATFVWDFNAREMEKGRSQEQTHTEFNYSFDNYSSFDY 232 Query: 238 E-KSSISNFHESNSWLGISDKYWASVFIPSK--ETSFHSQFKYLSDGHARYQAKFSANEI 294 + ++S+ E+ +WL I +++++V P + S SQ + + +G + F+ N Sbjct: 233 DGRTSMEEPDETLNWLAIKQQFFSAVIEPQTGFKNSVGSQ-EMIDEGE--FLKTFNFNGQ 289 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 L G + + + P + Y+K+ F+ L+ GW FI Y Sbjct: 290 VDLAGNELNQNFKWYFMPLDLPLLKSYDKN-----FDELLPLGW-SFIGTMNRWFFIPMY 343 Query: 355 NLVGNFGIA----IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 NL+ ++GIA I L T+ VK++ P+ KQ+ +A M+ I+P+IDE+ K+K + P Sbjct: 344 NLISSWGIAAGWVIFLMTIIVKIILSPVMFKQHKLSAMMRVIRPEIDEVNAKYKDADPMK 403 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 Q+ + +Y+ +N +AGC P LLQIP+F+A+++ +++R FW + KDL A D Sbjct: 404 KQQETMAVYRKAGVNQMAGCLPALLQIPIFYALFRFFPNMIDLRGKSFW-FAKDLTAYDD 462 Query: 471 TNIFTLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSP----PPADKG---QAMILN 521 LPF +P F+ H+ I+ I ++ + I M+ P +G +++ Sbjct: 463 V------IKLPFNIP-FLGEHLSIFAIACTVVILIYTVMTSGNIQQPQQEGMPNMKVLMY 515 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 P+ F+F L++ +GL Y+ SN I+I+ Sbjct: 516 IFPITFLFFLNTGASGLSWYYFVSNAINIL 545 >gi|257470416|ref|ZP_05634507.1| inner membrane protein [Fusobacterium ulcerans ATCC 49185] gi|317064624|ref|ZP_07929109.1| inner membrane protein oxaA [Fusobacterium ulcerans ATCC 49185] gi|313690300|gb|EFS27135.1| inner membrane protein oxaA [Fusobacterium ulcerans ATCC 49185] Length = 208 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 22/210 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ + ++L GNFG+AI+ T+ +K++ PL KQ S +MK +QP++D+L+EK+K P Sbjct: 18 MLVFMHHLTGNFGLAIIGVTILMKIILLPLTLKQDKSMKSMKKLQPELDKLKEKYKGDPK 77 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + QK M +LY+ H +NP GC P+L+Q+P+ +A++ V+ + + + F W+ +L Sbjct: 78 MLNQKTM-ELYQQHKVNPAGGCLPLLVQLPILWALFGVLRGGIVPQDSTFL-WM-ELVKP 134 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 D PFY I P++ + F+Q K+ + ++ P++ V Sbjct: 135 D-----------PFY--------ILPVLNGVVSFVQQKVMGSSDNPQMKNMMYMFPIMMV 175 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F PAGL IYW S++ ++QQ +IMK Sbjct: 176 FISYKMPAGLQIYWLTSSLAGVIQQYLIMK 205 >gi|320449653|ref|YP_004201749.1| 60 kDa inner membrane insertion protein [Thermus scotoductus SA-01] gi|320149822|gb|ADW21200.1| 60 kDa inner membrane insertion protein [Thermus scotoductus SA-01] Length = 431 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 86/295 (29%), Positives = 148/295 (50%), Gaps = 38/295 (12%) Query: 268 ETSFHSQFKYLSDGHARYQAKFSANE--ITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 +T + + ++ + K E +T+ PG+++ ++ G E H E L Sbjct: 164 QTKPKAGYALVAFAQRAFSGKLVGKEATLTLTPGETLK----VYGGQNEL-VRFHVEGLL 218 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 ++P WG ++ + LM + G++G+AI+ T+ V+LL +PL +Q+ S Sbjct: 219 SLPGLFSPNIWGQ---LSLGLLWLMEVAFRHTGSWGLAILFLTLVVRLLLWPLMHQQFKS 275 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A M+ +QP I ++ EK+K P + + M +LY+ H +NP AGC P+ +Q+P+ F ++K Sbjct: 276 MAEMQRLQPLIQKINEKYKDDPNKRAEATM-KLYQEHKVNPAAGCLPLFIQMPILFILWK 334 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 VI+ + E WI DLA D PFY I P + S F+ Sbjct: 335 VIA-NYEFGQGLL--WIPDLALPD-----------PFY--------ILPALYVASTFLST 372 Query: 506 KMSPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +S A + +I +M ++F+F + FP+G+ +YW SN+I +VQQ +I K Sbjct: 373 WLS---AHGNKDLIRQSLFMNLIFIFLVLQFPSGVTLYWVLSNLIGLVQQWLINK 424 >gi|305667728|ref|YP_003864015.1| putative inner membrane protein translocase component YidC [Maribacter sp. HTCC2170] gi|88707565|gb|EAQ99807.1| putative inner membrane protein translocase component YidC [Maribacter sp. HTCC2170] Length = 619 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 128/232 (55%), Gaps = 17/232 (7%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 WG F +I + +F + FY+L+ + GIAI++ T+ V+L P+ K Y+S A MK + Sbjct: 351 WGIFGWINRYIF---TPFYSLLSTYFPYGIAIVIMTILVRLAMSPVTYKSYLSQAKMKVL 407 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 +P+I EL EK+K + + Q+ M +LY ++P++GC P LQ+P+F+A++ S Sbjct: 408 KPEISELGEKYKDNAMKKQQETM-KLYNKAGVSPMSGCVPAFLQMPIFYALFMFFPTSFA 466 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--- 509 +R F W DL++ D F +PFY H+ ++PI+ S+++F M M+ Sbjct: 467 LRQKAFL-WADDLSSFDTIYQFPEGFSIPFYGD---HISLFPILASVAIFFYMMMTTGQN 522 Query: 510 ---PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P I+ MP + +F +++ +GL +Y+ SN+I+I VI + Sbjct: 523 MPQQPGMPNMKFIMYLMPFMMLFFFNNYASGLSLYYFVSNLITIGIMLVIKR 574 >gi|224539444|ref|ZP_03679983.1| hypothetical protein BACCELL_04349 [Bacteroides cellulosilyticus DSM 14838] gi|224518949|gb|EEF88054.1| hypothetical protein BACCELL_04349 [Bacteroides cellulosilyticus DSM 14838] Length = 616 Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 166/335 (49%), Gaps = 29/335 (8%) Query: 247 ESNSWLGISDKYWASVFIPS---KETSFHSQFKYLSDGHAR-YQAKFSANEITILPGKSI 302 E W+ +++++SVFI ++T S+ + G+ + Y A+ S + P Sbjct: 250 ERLDWIAFKNQFFSSVFIADADFEKTKLVSKMEREGSGYIKDYSAEMST---SFDPTGKQ 306 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVG-- 358 T F + G + T+ +K ++E+ L+ GW + ++ F L G Sbjct: 307 PTQMFFYFGPNHYKTLTALDKGRD-EKWELNRLVYLGWPLIRWVNKWFTINIFDWLSGWG 365 Query: 359 -NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMI 416 + GI ++L T+ VK + FP K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ Sbjct: 366 LSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKPKIDEINKKYPKQEDAMKKQQEVM 425 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +Y + ++P+ GC P+L+Q PV A++ + ++E+R F W DL+ D Sbjct: 426 GMYSQYGVSPMGGCLPMLVQFPVLIALFMFVPSAIELRQQSFL-WADDLSTYDA------ 478 Query: 477 FGILPFYLPGF-MHVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVVFV 528 F PF +P H+ ++ ++M++ + K D G Q + W MP++ + Sbjct: 479 FINFPFNIPFLGSHLSLFCLLMTVVNILNSKFMMQQQDTGANPQMAAMKWMTYLMPIMML 538 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F L+S+P+GL Y+ S +IS+V ++ K E Sbjct: 539 FILNSYPSGLNYYYFISTLISVVTTLILRKTTNEE 573 >gi|330752544|emb|CBL87491.1| inner membrane protein translocase component YidC [uncultured Flavobacteria bacterium] Length = 564 Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 97/334 (29%), Positives = 168/334 (50%), Gaps = 32/334 (9%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D EK SN + W+ ++++++FI S K + ++ Y + SA Sbjct: 224 DSEKDIKSNLN----WVAFKQQFFSAIFISKNGFSKPISLKVSKNENSIYIKELSAKFEI 279 Query: 296 ILPGKSITTTNFLFA-GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF------IAKPMFM 348 S +F F G +PT+ +Y+ FE +I GW F I +F Sbjct: 280 PYGHNSTEKHSFQFYFGPNHYPTLKNYDSG-----FEEIIPLGWSLFRWVNKYIIINLFD 334 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +S ++N N+G+ I+L T+ +KL P K Y+S A MK ++P+ID++ +K K P Sbjct: 335 FLSKYFN---NYGLIILLLTIIIKLALAPFTYKAYLSQAKMKVLKPEIDKISDKDKD--P 389 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +Q+A + LY+ +NP+ GC P+L Q P+ A+++ S+E+R F W DL+A Sbjct: 390 MKVQQATMNLYRKAGVNPMGGCLPMLFQFPILIAMFRFFPASIELRQKSFL-WADDLSAY 448 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW----MP 524 D +I L +PFY HV ++ ++M++S + +M+ A GQ + W MP Sbjct: 449 D--SILELGFNIPFYGD---HVSLFTLLMTISTLLYTRMNTSMA-TGQMAQMKWMMYLMP 502 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++F+ +++ AGL Y+ +N+ + QQ + K Sbjct: 503 IMFLGFFNNYAAGLSYYYFLANMFTFGQQYFMKK 536 >gi|118480108|ref|YP_897259.1| OxaA-like protein precursor [Bacillus thuringiensis str. Al Hakam] gi|229187267|ref|ZP_04314412.1| Membrane protein oxaA 2 [Bacillus cereus BGSC 6E1] gi|118419333|gb|ABK87752.1| stage III sporulation protein J [Bacillus thuringiensis str. Al Hakam] gi|228596277|gb|EEK53952.1| Membrane protein oxaA 2 [Bacillus cereus BGSC 6E1] Length = 262 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 130/235 (55%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 42 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 101 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 102 LKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 162 RTSTFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNST 200 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 201 PVEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 255 >gi|196047512|ref|ZP_03114722.1| stage III sporulation protein J [Bacillus cereus 03BB108] gi|225867005|ref|YP_002752383.1| stage III sporulation protein J [Bacillus cereus 03BB102] gi|196021626|gb|EDX60323.1| stage III sporulation protein J [Bacillus cereus 03BB108] gi|225786361|gb|ACO26578.1| stage III sporulation protein J [Bacillus cereus 03BB102] Length = 260 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 130/235 (55%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 100 LKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSTFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNST 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 199 PVEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 253 >gi|30265065|ref|NP_847442.1| OxaA-like protein precursor [Bacillus anthracis str. Ames] gi|47530571|ref|YP_021920.1| OxaA-like protein precursor [Bacillus anthracis str. 'Ames Ancestor'] gi|49187877|ref|YP_031130.1| OxaA-like protein precursor [Bacillus anthracis str. Sterne] gi|165870877|ref|ZP_02215529.1| stage III sporulation protein J [Bacillus anthracis str. A0488] gi|167634953|ref|ZP_02393271.1| stage III sporulation protein J [Bacillus anthracis str. A0442] gi|167639999|ref|ZP_02398267.1| stage III sporulation protein J [Bacillus anthracis str. A0193] gi|170685875|ref|ZP_02877098.1| stage III sporulation protein J [Bacillus anthracis str. A0465] gi|170707039|ref|ZP_02897496.1| stage III sporulation protein J [Bacillus anthracis str. A0389] gi|177652211|ref|ZP_02934714.1| stage III sporulation protein J [Bacillus anthracis str. A0174] gi|190567249|ref|ZP_03020164.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I] gi|196032983|ref|ZP_03100396.1| stage III sporulation protein J [Bacillus cereus W] gi|218906219|ref|YP_002454053.1| stage III sporulation protein J [Bacillus cereus AH820] gi|227817795|ref|YP_002817804.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684] gi|229601480|ref|YP_002869262.1| stage III sporulation protein J [Bacillus anthracis str. A0248] gi|254687356|ref|ZP_05151213.1| OxaA-like protein precursor [Bacillus anthracis str. CNEVA-9066] gi|254725369|ref|ZP_05187152.1| OxaA-like protein precursor [Bacillus anthracis str. A1055] gi|254733735|ref|ZP_05191451.1| OxaA-like protein precursor [Bacillus anthracis str. Western North America USA6153] gi|254740573|ref|ZP_05198264.1| OxaA-like protein precursor [Bacillus anthracis str. Kruger B] gi|254753165|ref|ZP_05205201.1| OxaA-like protein precursor [Bacillus anthracis str. Vollum] gi|254761508|ref|ZP_05213529.1| OxaA-like protein precursor [Bacillus anthracis str. Australia 94] gi|38502946|sp|Q81XH4|OXAA2_BACAN RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|30259742|gb|AAP28928.1| stage III sporulation protein J [Bacillus anthracis str. Ames] gi|47505719|gb|AAT34395.1| stage III sporulation protein J [Bacillus anthracis str. 'Ames Ancestor'] gi|49181804|gb|AAT57180.1| stage III sporulation protein J [Bacillus anthracis str. Sterne] gi|164713386|gb|EDR18911.1| stage III sporulation protein J [Bacillus anthracis str. A0488] gi|167512080|gb|EDR87458.1| stage III sporulation protein J [Bacillus anthracis str. A0193] gi|167529703|gb|EDR92452.1| stage III sporulation protein J [Bacillus anthracis str. A0442] gi|170128142|gb|EDS97012.1| stage III sporulation protein J [Bacillus anthracis str. A0389] gi|170670339|gb|EDT21079.1| stage III sporulation protein J [Bacillus anthracis str. A0465] gi|172082217|gb|EDT67283.1| stage III sporulation protein J [Bacillus anthracis str. A0174] gi|190561753|gb|EDV15723.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I] gi|195994412|gb|EDX58367.1| stage III sporulation protein J [Bacillus cereus W] gi|218540128|gb|ACK92526.1| stage III sporulation protein J [Bacillus cereus AH820] gi|227006381|gb|ACP16124.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684] gi|229265888|gb|ACQ47525.1| stage III sporulation protein J [Bacillus anthracis str. A0248] Length = 260 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/235 (33%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 100 LKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSTFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNST 198 Query: 514 KG-QAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 G Q +L MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 199 SGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 253 >gi|228917653|ref|ZP_04081195.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228842030|gb|EEM87135.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 262 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/235 (33%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 42 YFVYPISFMIQLVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 101 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 102 LKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 162 RTSTFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNST 200 Query: 514 KG-QAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 G Q +L MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 201 SGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 255 >gi|229014209|ref|ZP_04171330.1| Membrane protein oxaA 2 [Bacillus mycoides DSM 2048] gi|229169740|ref|ZP_04297440.1| Membrane protein oxaA 2 [Bacillus cereus AH621] gi|228613779|gb|EEK70904.1| Membrane protein oxaA 2 [Bacillus cereus AH621] gi|228747163|gb|EEL97045.1| Membrane protein oxaA 2 [Bacillus mycoides DSM 2048] Length = 260 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 100 LKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNVT 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 199 PGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMERE 253 >gi|228930050|ref|ZP_04093060.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936911|ref|ZP_04099661.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229124560|ref|ZP_04253745.1| Membrane protein oxaA 2 [Bacillus cereus 95/8201] gi|228658900|gb|EEL14555.1| Membrane protein oxaA 2 [Bacillus cereus 95/8201] gi|228822753|gb|EEM68635.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829549|gb|EEM75176.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 262 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/235 (33%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 42 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 101 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 102 LKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 162 RTSTFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNST 200 Query: 514 KG-QAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 G Q +L MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 201 SGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 255 >gi|154494956|ref|ZP_02033961.1| hypothetical protein PARMER_04002 [Parabacteroides merdae ATCC 43184] gi|154085506|gb|EDN84551.1| hypothetical protein PARMER_04002 [Parabacteroides merdae ATCC 43184] Length = 638 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 98/349 (28%), Positives = 170/349 (48%), Gaps = 34/349 (9%) Query: 251 WLGISDKYWASVFIPSKE----TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTN 306 W+ D Y++S+ I E T+ S+ DG + K + + L G T Sbjct: 266 WVAYKDMYFSSILIAGNEGFESTTIDSKM-LPEDGSFLKEYKTTTSVPFDLKGNEATDMR 324 Query: 307 FLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWF-------YFIAKPMFMLMSYFYNL 356 F F G +F + Y+ D+ E ++ GW YF+ P+F + F Sbjct: 325 FYF-GPNQFSLLKSYDDDVEKADQLDLEKIVPLGWGIFRWVNQYFVI-PLFNFLGQF--- 379 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAM 415 + ++G+ I L TV VKL+ FPL K Y+S+A M+ ++P+++EL K+ Q Q+A+ Sbjct: 380 IHSYGLLIFLLTVIVKLILFPLTYKSYMSSAKMRVLRPQVEELNAKYPGQDKAVERQRAI 439 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LY +P+AGC P+LLQ+P+ A++ ++E+RH F W DL+ D I + Sbjct: 440 MELYSRAGASPMAGCVPMLLQMPILVALFMFFPSAIELRHQSFL-WAHDLSTYDA--IVS 496 Query: 476 LFGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSPPPADKGQ-------AMILNWMPVVF 527 +P P F H+ ++ ++M+++ I K + + GQ AM+ ++ Sbjct: 497 WNTYIPIITPYFGNHISLFCLLMTVTNIIYTKFNMDQTNTGQQQMPGMKAMMYMMPLMML 556 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 VF + + +GL Y+ S +I+I+ Q VI + E L+ +L K Sbjct: 557 VF-FNQYASGLTYYYFISTLITIL-QTVIFRYTINEDKLLAKLEENKKK 603 >gi|163942740|ref|YP_001647624.1| OxaA-like protein precursor [Bacillus weihenstephanensis KBAB4] gi|163864937|gb|ABY45996.1| 60 kDa inner membrane insertion protein [Bacillus weihenstephanensis KBAB4] Length = 260 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 100 LKQKYGDVGKNLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNVT 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 199 PGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMERE 253 >gi|229135853|ref|ZP_04264621.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST196] gi|228647593|gb|EEL03660.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST196] Length = 262 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 42 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 101 Query: 399 LREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 102 LKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 162 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNVT 200 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 201 PGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMERE 255 >gi|89891424|ref|ZP_01202930.1| 60 Kd inner-membrane protein [Flavobacteria bacterium BBFL7] gi|89516455|gb|EAS19116.1| 60 Kd inner-membrane protein [Flavobacteria bacterium BBFL7] Length = 610 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 82/287 (28%), Positives = 152/287 (52%), Gaps = 30/287 (10%) Query: 279 SDGHARYQAKFSAN-EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 D Y KF++ E+ G+ ++ F G ++ + YE++L + ++D G Sbjct: 282 DDEQDTYTKKFNSQIELEYTGGELAYNMDWYF-GPTDYDILDGYERNL-----DEVVDLG 335 Query: 338 WFYF------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W F + +P+F L++ N +GIAI+L T+ V+++ P+ K Y++ A MK Sbjct: 336 WGIFGWINEFVIRPLFSLLTK--NAGIPYGIAIILLTICVRIILSPVLYKSYMTQAKMKI 393 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++P+++ + EK+K + + Q+ M ++ +PL+GC P LLQ+PVFFA++K + Sbjct: 394 LRPELNRIAEKYKDNAMKKQQETM-RIQSEAGASPLSGCLPGLLQMPVFFALFKFFPTAF 452 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-- 509 ++R F W DL++ D IF L +PFY HV ++PI+ S+++F M+M+ Sbjct: 453 DLRQKSFL-WADDLSSYD--EIFKLPFNIPFYGD---HVSLFPILASIAIFFYMQMTTGQ 506 Query: 510 ------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 P I+ P+ + +++ +GL +Y+ SN+I+I Sbjct: 507 TMQNTQQPGMPNMKFIMYLSPLFMLVFFNNYASGLSLYYFVSNLITI 553 >gi|120436565|ref|YP_862251.1| putative inner membrane protein translocase component YidC [Gramella forsetii KT0803] gi|117578715|emb|CAL67184.1| inner membrane protein OxaA [Gramella forsetii KT0803] Length = 616 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/265 (29%), Positives = 148/265 (55%), Gaps = 35/265 (13%) Query: 309 FAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAKPMFM-LMSYFYNLVGNFGIAIM 365 + G ++ ++ Y+++L +P + WG F +I K +F+ ++ + ++GIAI+ Sbjct: 323 YYGPSDYKILNDYDRNLDEIVP-----LGWGIFGWINKYIFIPFFAFLAGFLPSYGIAII 377 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 T+ V+++ P+ K Y+S A MK ++P+I+EL EK+K + + Q+ M +LY + Sbjct: 378 AMTIVVRIVLSPVTYKSYLSQAKMKILKPEINELNEKYKDNAMKKQQETM-KLYSKAGAS 436 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P++GC P L+QIPVF+A+++ + ++R F W DL++ D + LPF++ Sbjct: 437 PMSGCLPALMQIPVFYALFQFFPSAFQLRQKSFL-WADDLSSYD------VVAELPFHIW 489 Query: 486 GFM-HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP----VVFVFALS-------- 532 + HV ++PI+ S+++F+ M M+ GQ+M N P + F+ LS Sbjct: 490 FYGDHVSLFPILASIAIFVYMMMTT-----GQSMQANQQPGMPNMKFLMYLSPLAMLVFF 544 Query: 533 -SFPAGLIIYWSWSNVISIVQQAVI 556 ++ +GL +Y+ SN+I+I VI Sbjct: 545 NNYASGLSLYYFTSNLITIGIMLVI 569 >gi|239826978|ref|YP_002949602.1| hypothetical protein GWCH70_1536 [Geobacillus sp. WCH70] gi|239807271|gb|ACS24336.1| 60 kDa inner membrane insertion protein [Geobacillus sp. WCH70] Length = 252 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 122/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ PM L+ +L G N+GIAI++ T+ V+ PL KQY +T M+ ++P++ Sbjct: 32 WDHYFVYPMSKLLLMLGHLFGDNYGIAIIVLTLIVRFCLLPLILKQYKTTIAMQKLRPEL 91 Query: 397 DELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+K + + LQK M+QLY+ H I+P +GC P+ +Q+P+F A+Y IS + E+ Sbjct: 92 QKLQEKYKGNDIETQRKLQKEMMQLYQKHGIHPASGCLPVFIQMPIFMALYYAISRTQEI 151 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W++ L DP I PI+ SL+ FI +++SP + Sbjct: 152 KLHSFL-WVQ-LGHRDPYFIL-------------------PILASLATFISVRLSPSMTE 190 Query: 514 K---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+ MP++ +S P+ L +YW SI+Q ++ Sbjct: 191 QQMPQMAMMSYIMPIMIFIGANSVPSALSLYWVVGGCFSIIQSLIL 236 >gi|228923750|ref|ZP_04087028.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835879|gb|EEM81242.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 260 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHISGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 100 LKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 199 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|47567064|ref|ZP_00237781.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus G9241] gi|229158625|ref|ZP_04286683.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 4342] gi|47556382|gb|EAL14716.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus G9241] gi|228624609|gb|EEK81378.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 4342] Length = 260 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 129/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 100 LKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 199 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|228988273|ref|ZP_04148368.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771445|gb|EEM19916.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 262 Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 129/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 42 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 101 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 102 LKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 162 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 200 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 201 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 255 >gi|229062687|ref|ZP_04199996.1| Membrane protein oxaA 2 [Bacillus cereus AH603] gi|228716657|gb|EEL68354.1| Membrane protein oxaA 2 [Bacillus cereus AH603] Length = 260 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 100 LKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNVT 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 199 PGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRVMERE 253 >gi|46198383|ref|YP_004050.1| hypothetical protein TTC0075 [Thermus thermophilus HB27] gi|46196005|gb|AAS80423.1| probable membrane protein [Thermus thermophilus HB27] Length = 430 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 82/269 (30%), Positives = 136/269 (50%), Gaps = 36/269 (13%) Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 E+ + PG+ + ++ G E H E L+ P WG ++ + +M Sbjct: 189 GEVRLGPGEILR----VYGGQNEL-VRFHVEGLLSFPGLFSPNLWGQ---LSLGLLWIME 240 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 Y GN+G+AI+ T+ V+LL +PL +Q+ S A ++ +QP I ++ EK+K P + Sbjct: 241 AAYRFTGNWGLAILFLTLVVRLLLWPLMHQQFKSMAEIQRLQPLIQKINEKYKDDPNKRA 300 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + M +LY+ H +NP AGC P+L+Q+P+ F ++KVI+ + E WI DLA DP Sbjct: 301 EATM-KLYQEHRVNPAAGCLPLLIQMPILFILWKVIA-NYEFGQGFL--WIPDLALPDPY 356 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN--WMPVVFVF 529 I P++ S F+ +S A + +I +M ++FVF Sbjct: 357 YIL-------------------PVLYVASTFLSTWLS---AHGNRDLIRQSLFMNLIFVF 394 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FP+G+ +YW S +I +VQQ +I K Sbjct: 395 LVLQFPSGVTLYWVLSTLIGLVQQWLINK 423 >gi|269792319|ref|YP_003317223.1| 60 kDa inner membrane insertion protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099954|gb|ACZ18941.1| 60 kDa inner membrane insertion protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 268 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 133/252 (52%), Gaps = 30/252 (11%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 M ++ FY + ++G++I++ TV V++L PL+ KQ VS M+ IQP+I ++EK+ Sbjct: 12 MLRTLNLFYAITHSYGLSIIMLTVVVRILLHPLSHKQMVSMQKMQKIQPRIKVIQEKYAN 71 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV-----------ISISLEMR 454 ++ Q+ M QLY+ + +NP AGC P+L+Q+P+F +Y+ + ++L M Sbjct: 72 DKEKMNQEIM-QLYRENGVNPAAGCLPLLVQLPIFILLYRALINYDFSNTSFLGVNLSMS 130 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGIL--PFYLPGFMHVGIWP---IIMSLSMFI---QMK 506 +++A PT L GIL P G +VG++ I++ L F+ Q K Sbjct: 131 ALGAMANALGISSAKPTFTAILSGILTNP---AGLANVGVYAPSVILIVLVGFLTWYQQK 187 Query: 507 MSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 MS + Q +NW MP+ F S P G++IYW S+ IS+ QQ +M E+ Sbjct: 188 MS--SGNNPQMAFMNWFMPLFMSFICLSLPGGVMIYWGASSFISVAQQKWVMMRTEEEM- 244 Query: 566 LIDRLRSTFSKN 577 +++ T KN Sbjct: 245 ---KVKPTLHKN 253 >gi|150389948|ref|YP_001319997.1| 60 kDa inner membrane insertion protein [Alkaliphilus metalliredigens QYMF] gi|149949810|gb|ABR48338.1| 60 kDa inner membrane insertion protein [Alkaliphilus metalliredigens QYMF] Length = 217 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 79/224 (35%), Positives = 116/224 (51%), Gaps = 25/224 (11%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ +P+ L+ ++++GN+GIAI++ TV VKL PL KQ S M+ IQP I EL+ Sbjct: 3 FLTQPLGALLKIIFDVIGNYGIAIIVFTVLVKLAMVPLTMKQTKSMKKMQEIQPMIKELQ 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI------SISLEMR 454 E+ K Q+ K M +LYK +N++P GC P+L+Q P+ ++ V+ +LE+ Sbjct: 63 EQHKDDKEQMNIKVM-ELYKEYNVSPFGGCLPLLIQFPIIIGLFTVLREPMDYGFTLEVI 121 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 A F WI +LA ADP I L L YL I M + D Sbjct: 122 QAGFL-WIPNLAEADPW-ILPLLAGLTTYLSS----------------ISMAATGNKKDP 163 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q ++ + P++ + SFPAGL +YW SN+ QQ VI K Sbjct: 164 TQVIMKYFFPIMIFWWGRSFPAGLTLYWVISNLFQAGQQIVINK 207 >gi|158321892|ref|YP_001514399.1| 60 kDa inner membrane insertion protein [Alkaliphilus oremlandii OhILAs] gi|158142091|gb|ABW20403.1| 60 kDa inner membrane insertion protein [Alkaliphilus oremlandii OhILAs] Length = 220 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 34/229 (14%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +A+P L+ ++L N+G++I+L T+ KLL PL KQ S M+ IQPK+ +L+E Sbjct: 4 LARPFGALLKLIFDLTNNYGLSIILFTIVTKLLTLPLTIKQNKSMKEMQEIQPKLKKLQE 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI----------SISL 451 K+K P Q+ K M +LYK HN++P GC P+L+Q P+ ++ + + Sbjct: 64 KYKNDPEQLNIKTM-ELYKEHNVSPFGGCLPLLIQFPIIIGLFAAVREPGTYVFGSQAAY 122 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSP 509 E + F W+ +L ADP I PI+ L+ ++ S Sbjct: 123 EAINTSFL-WLPNLTVADP--------------------WILPILAGLTTYLSSATLTSG 161 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 AD+ Q ++ +MPV+ + +FPAGL +YW SNV +QQ ++ + Sbjct: 162 KSADQTQKIMTYFMPVMIFWWGKTFPAGLTLYWFVSNVFQTIQQLILRR 210 >gi|55980412|ref|YP_143709.1| hypothetical protein TTHA0443 [Thermus thermophilus HB8] gi|55771825|dbj|BAD70266.1| putative membrane protein [Thermus thermophilus HB8] Length = 430 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 82/269 (30%), Positives = 136/269 (50%), Gaps = 36/269 (13%) Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 E+ + PG+ + ++ G E H E L+ P WG ++ + +M Sbjct: 189 GEVRLGPGEILR----VYGGQNEL-VRFHVEGLLSFPGLFSPNLWGQ---LSLGLLWIME 240 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 Y GN+G+AI+ T+ V+LL +PL +Q+ S A ++ +QP I ++ EK+K P + Sbjct: 241 AAYRFTGNWGLAILFLTLVVRLLLWPLMHQQFKSMAEIQRLQPLIQKINEKYKDDPNKRA 300 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + M +LY+ H +NP AGC P+L+Q+P+ F ++KVI+ + E WI DLA DP Sbjct: 301 EATM-KLYQEHRVNPAAGCLPLLIQMPILFILWKVIA-NYEFGQGFL--WIPDLALPDPY 356 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN--WMPVVFVF 529 I P++ S F+ +S A + +I +M ++FVF Sbjct: 357 YIL-------------------PVLYVASTFLSTWLS---AHGNRDLIRQSLFMNLIFVF 394 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FP+G+ +YW S +I +VQQ +I K Sbjct: 395 LVLQFPSGVTLYWVLSTLIGLVQQWLINK 423 >gi|30023056|ref|NP_834687.1| OxaA-like protein precursor [Bacillus cereus ATCC 14579] gi|229049708|ref|ZP_04194265.1| Membrane protein oxaA 2 [Bacillus cereus AH676] gi|229112464|ref|ZP_04242001.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-15] gi|229130275|ref|ZP_04259234.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-Cer4] gi|38502940|sp|Q815V9|OXAA2_BACCR RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|29898616|gb|AAP11888.1| 60 kDa inner membrane protein YIDC [Bacillus cereus ATCC 14579] gi|228653208|gb|EEL09087.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-Cer4] gi|228670844|gb|EEL26151.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-15] gi|228722621|gb|EEL74009.1| Membrane protein oxaA 2 [Bacillus cereus AH676] gi|326942840|gb|AEA18736.1| OxaA-like protein precursor [Bacillus thuringiensis serovar chinensis CT-43] Length = 260 Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 129/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 100 LKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 199 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|228942189|ref|ZP_04104729.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975118|ref|ZP_04135677.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981757|ref|ZP_04142052.1| Membrane protein oxaA 2 [Bacillus thuringiensis Bt407] gi|228777869|gb|EEM26141.1| Membrane protein oxaA 2 [Bacillus thuringiensis Bt407] gi|228784639|gb|EEM32659.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817523|gb|EEM63608.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 262 Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 129/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 42 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 101 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 102 LKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 162 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 200 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 201 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 255 >gi|212550525|ref|YP_002308842.1| inner membrane protein translocase component YidC [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|254772747|sp|B6YQF9|OXAA_AZOPC RecName: Full=Inner membrane protein oxaA gi|212548763|dbj|BAG83431.1| preprotein translocase YidC subunit [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 612 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 133/512 (25%), Positives = 231/512 (45%), Gaps = 95/512 (18%) Query: 92 LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV-WNLISGKIL 150 LN ++ ++ SNS + T+L + KN Y +D+V T + P+ V W L+S I Sbjct: 130 LNSEDFYFEIVSNSELETILRLNAGKNRY---IDFVYTLH----PDDYMVDWKLVSHNIQ 182 Query: 151 TPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210 T +S H T+ + +IR +GR + Sbjct: 183 TE-------------------LSHSMH-------TLNIQWMQKIRQQEKGRKFEERYARL 216 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 T F + +EQ K + N W+G D++++SVFI Sbjct: 217 TYKFLTDD-----------IEQLRET--KDDVRNVPNKLKWIGYKDQFFSSVFI------ 257 Query: 271 FHSQF-------KYLSDGHARYQAKFSA------NEITILPGKSITTTNFLFAGAKEFPT 317 HS F KYL+ G Y ++S N I P K NF F G ++ Sbjct: 258 VHSNFESAKLDSKYLTYGA--YIKEYSTSTSIPYNIANIEPIK----FNFYF-GPNDYSL 310 Query: 318 IHHYEKDLAIPR---FEMLIDWGWFYFIAKPMFMLMSYFYNLVG----NFGIAIMLTTVF 370 + Y+K + E L+ GW F A +++ F L N G+AI++ T+ Sbjct: 311 LKSYDKTKLKEQNLELEKLVPLGWSLFRAINKCLIIPIFNWLTNGENVNLGLAILILTLI 370 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQVLQKAMIQLYKTHNINPLAG 429 +K+ FPL K ++S+A M+ ++P+++ + K+ Q + Q+ ++LY+ +NP+ G Sbjct: 371 IKIALFPLTYKSFISSAKMRVLKPQVENINIKYSGQEKALIRQQKTMELYRQVGVNPMTG 430 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM- 488 C+PILLQ+P A++ ++ +RH F W DL+ D + +PF +P F+ Sbjct: 431 CFPILLQMPFLIALFMFFPSAIGLRHQSFL-WANDLSTYD--TLIQWSTDIPF-IPRFLG 486 Query: 489 -HVGIWPIIMSLSMFIQMKMSPPPADK-------GQAMILNWMPVVFVFALSSFPAGLII 540 H+ ++ ++MSL+ + + + G + + +MPVV F L+S+PAGL Sbjct: 487 NHISLFCLLMSLATILNTRYNTMYQQNIGQEQFPGMKLTMYFMPVVMFFFLNSYPAGLNY 546 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 Y+ S +I+I+ Q +I + E+ L+ +L + Sbjct: 547 YYLISTLITIM-QTIIFRGLVNELNLLAKLEA 577 >gi|332827257|gb|EGK00027.1| hypothetical protein HMPREF9455_03616 [Dysgonomonas gadei ATCC BAA-286] Length = 646 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 93/362 (25%), Positives = 170/362 (46%), Gaps = 54/362 (14%) Query: 231 EQKYSDI--------------EKSSISNFHESNSWLGISDKYWASVFIPSK--ETSFHSQ 274 EQ+YS I +KS E W+ ++++A + I + ET+ Sbjct: 239 EQRYSHIYYKYIGGDVKELSSDKSEQLEVKEPAKWIAFKNQFFAPILIADEKIETALLDS 298 Query: 275 FKYLSDGHARY----QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE-------K 323 ++D ++ Y +A A + +I+ + G F + Y+ K Sbjct: 299 KVLVTDENSEYLKTVEATIYAPATVDMNAGTISAGFTYYLGPMSFTLLKGYDSHIDDVNK 358 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAK 380 L + + L+ GW F + ++ F L G + GI I+L T+ VKL+ PL Sbjct: 359 QLDLDK---LVPLGWTLFRWVNQYFVIPIFNLLRGTGMSMGIVILLLTIIVKLVISPLTF 415 Query: 381 KQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K ++S+A M+ ++P+++EL K+ KQ Q+A + LY +NP++GC P+LLQ+P+ Sbjct: 416 KSFMSSAKMRVLRPQVEELAAKYPKQEQAMEKQQATMALYNKAGVNPMSGCIPLLLQMPI 475 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADP----TNIFTLFGILPFYLPGFMHVGIWPI 495 A++ ++E+R F W DL+ D N L G H+ ++ I Sbjct: 476 LIALFSFFPNAIELRGQSFL-WATDLSTYDAIIEWKNHIPLIGT---------HISLFCI 525 Query: 496 IMSLSMFIQMKMSPPPADKGQAMI--LNW----MPVVFVFALSSFPAGLIIYWSWSNVIS 549 +M+++ I K + + GQ + + W MP++F+F L+ +P+GL Y+ S +++ Sbjct: 526 LMTVTNIIYTKFNMEMTNTGQQQMPGMKWMMYLMPLIFLFMLNDYPSGLTYYYFLSLLVT 585 Query: 550 IV 551 I+ Sbjct: 586 IL 587 >gi|229076403|ref|ZP_04209368.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-18] gi|229099477|ref|ZP_04230406.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-29] gi|229105635|ref|ZP_04236268.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-28] gi|228677771|gb|EEL32015.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-28] gi|228683973|gb|EEL37922.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-29] gi|228706838|gb|EEL59046.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-18] Length = 262 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 42 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 101 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 102 LKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 162 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 200 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 201 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 255 >gi|229118494|ref|ZP_04247848.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-3] gi|228665064|gb|EEL20552.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-3] Length = 260 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 100 LKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 199 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|229175718|ref|ZP_04303224.1| Membrane protein oxaA 2 [Bacillus cereus MM3] gi|228607669|gb|EEK64985.1| Membrane protein oxaA 2 [Bacillus cereus MM3] Length = 260 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 129/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 100 LKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 199 PGEQVQMLKVQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMERE 253 >gi|206978224|ref|ZP_03239104.1| stage III sporulation protein J [Bacillus cereus H3081.97] gi|217962498|ref|YP_002341070.1| OxaA-like protein precursor [Bacillus cereus AH187] gi|222098473|ref|YP_002532531.1| oxaa-like protein precursor [Bacillus cereus Q1] gi|206743583|gb|EDZ55010.1| stage III sporulation protein J [Bacillus cereus H3081.97] gi|217066063|gb|ACJ80313.1| stage III sporulation protein J [Bacillus cereus AH187] gi|221242532|gb|ACM15242.1| probable stage III sporulation protein J [Bacillus cereus Q1] Length = 260 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 129/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 100 LKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 199 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMERE 253 >gi|228968133|ref|ZP_04129137.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|228791568|gb|EEM39166.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar sotto str. T04001] Length = 262 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 42 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 101 Query: 399 LREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 102 LKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 162 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 200 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 201 PGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 255 >gi|228910857|ref|ZP_04074666.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 200] gi|228848808|gb|EEM93653.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 200] Length = 262 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 42 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 101 Query: 399 LREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 102 LKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 162 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 200 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 201 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 255 >gi|75764154|ref|ZP_00743733.1| 60 kDa inner membrane protein YIDC [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228903521|ref|ZP_04067644.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 4222] gi|74488358|gb|EAO51995.1| 60 kDa inner membrane protein YIDC [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228856097|gb|EEN00634.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 4222] Length = 260 Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 100 LKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 199 PGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|229142366|ref|ZP_04270885.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST26] gi|228641136|gb|EEK97448.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST26] Length = 262 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 129/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 42 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 101 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 102 LKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 162 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 200 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 201 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMERE 255 >gi|218900170|ref|YP_002448581.1| stage III sporulation protein J [Bacillus cereus G9842] gi|218542481|gb|ACK94875.1| stage III sporulation protein J [Bacillus cereus G9842] Length = 260 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 100 LKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 199 PGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|229199168|ref|ZP_04325850.1| Membrane protein oxaA 2 [Bacillus cereus m1293] gi|228584311|gb|EEK42447.1| Membrane protein oxaA 2 [Bacillus cereus m1293] Length = 262 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 42 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 101 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 102 LKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 162 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 200 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 201 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMERE 255 >gi|88803448|ref|ZP_01118974.1| putative inner membrane protein translocase component YidC [Polaribacter irgensii 23-P] gi|88781014|gb|EAR12193.1| putative inner membrane protein translocase component YidC [Polaribacter irgensii 23-P] Length = 622 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 137/240 (57%), Gaps = 24/240 (10%) Query: 334 IDWGWFYFIAKPMFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + WG F F+ + +F + + ++ N+G+ I+L T+ V+L+ PL K Y+S+A MK I Sbjct: 344 LGWGIFGFLNRTVFYPVFNLLKGVLSNYGLIIILMTIIVRLIMSPLVYKSYLSSAKMKVI 403 Query: 393 QPKIDELREKF--KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +P++ L EK+ K++ + Q+ M + + ++ ++GC P LLQ+PVFFA++K + Sbjct: 404 RPELTALNEKYPGKENAMKRQQETM-AIQRKAGVSMMSGCIPALLQMPVFFALFKFFPTN 462 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-- 508 L +R F W DL++ D IF L +PFY HV ++PI+ S+++F MKM+ Sbjct: 463 LALRQESFL-WAPDLSSYD--TIFQLPFTIPFYGD---HVSLFPILASIAIFFYMKMNQS 516 Query: 509 -----PPPADKG---QAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 PA +G ++ +M P++ +F +++ + L +Y+ SN+++IV VI Sbjct: 517 QQANMQAPAQEGMPDMGKMMKYMIYFSPIMMLFFFNNYASSLSLYYFISNLLTIVIMLVI 576 >gi|218235777|ref|YP_002369825.1| OxaA-like protein precursor [Bacillus cereus B4264] gi|228961262|ref|ZP_04122882.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229147568|ref|ZP_04275914.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST24] gi|229153210|ref|ZP_04281389.1| Membrane protein oxaA 2 [Bacillus cereus m1550] gi|296505459|ref|YP_003667159.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171] gi|218163734|gb|ACK63726.1| stage III sporulation protein J [Bacillus cereus B4264] gi|228630309|gb|EEK86959.1| Membrane protein oxaA 2 [Bacillus cereus m1550] gi|228635893|gb|EEK92377.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST24] gi|228798468|gb|EEM45461.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|296326511|gb|ADH09439.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171] Length = 260 Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 100 LKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 199 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|308071641|ref|YP_003873246.1| membrane protein oxaA 1 precursor [Paenibacillus polymyxa E681] gi|305860920|gb|ADM72708.1| Membrane protein oxaA 1 precursor [Paenibacillus polymyxa E681] Length = 288 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 123/228 (53%), Gaps = 28/228 (12%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G +G+A+++ + V+ + PL KQ S+ M+ IQP++ E++ K+K +P +V Q+ M + Sbjct: 67 GEYGLAVLILVIIVRTIILPLTLKQVRSSKAMQAIQPQLKEIQAKYKDTPEKVQQETM-K 125 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR-HAPFWGWIKDLAAADPTNIFTL 476 L++ + +NP+AGC P+++Q+P+F A+Y I + +R H W L P ++F L Sbjct: 126 LFQENKVNPMAGCLPLVVQMPIFIALYNAIYYNSALRDHDFLW-----LQLGKPDHLFIL 180 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQ----MKMSPPPADKGQAMILNWMPVVFVFALS 532 PI+ +++ F+Q MKM+P P +L PV+ +F Sbjct: 181 -----------------PILAAITTFVQTWMMMKMNPTPQQGPMQFLLYVYPVLILFMSY 223 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 +FP+ L +YW +SN+ +I+Q + + E L + ++ +K +S Sbjct: 224 NFPSALPLYWFYSNIYTIIQNYFLYRNKDKEAALANVKTASLAKTGSS 271 >gi|15226968|ref|NP_180446.1| ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] gi|38372238|sp|Q8LBP4|ALB3_ARATH RecName: Full=Inner membrane protein ALBINO3, chloroplastic; Flags: Precursor gi|2209332|gb|AAB61458.1| chloroplast membrane protein ALBINO3 [Arabidopsis thaliana] gi|3927828|gb|AAC79585.1| chloroplast membrane protein (ALBINO3) [Arabidopsis thaliana] gi|27311661|gb|AAO00796.1| chloroplast membrane protein (ALBINO3) [Arabidopsis thaliana] gi|30387561|gb|AAP31946.1| At2g28800 [Arabidopsis thaliana] gi|330253078|gb|AEC08172.1| inner membrane protein ALBINO3 [Arabidopsis thaliana] Length = 462 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 30/253 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M +++ + + +G AI+L T+ VK +PL K+Q ST M+ Sbjct: 111 GWFGFISDAMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQ 170 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QPKI +++++ + ++ Q +LYK +NPLAGC P L IPV+ +Y+ +S + Sbjct: 171 NLQPKIKAIQQRYAGNQERI-QLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNV 229 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVG--------IWPI 495 + E + WI L PT+I + + PF + G +G + P+ Sbjct: 230 ANEGLFTEGFFWIPSLGG--PTSIAARQSGSGISWLFPF-VDGHPPLGWYDTVAYLVLPV 286 Query: 496 IMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ S ++ M+ M PP PA K ++ ++P++ + S P+GL IYW +NV+S Sbjct: 287 LLIASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWLTNNVLST 346 Query: 551 VQQAVIMKMHGAE 563 QQ + K+ GA+ Sbjct: 347 AQQVYLRKLGGAK 359 >gi|324328956|gb|ADY24216.1| OxaA-like protein precursor [Bacillus thuringiensis serovar finitimus YBT-020] Length = 260 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 100 LKKKYGDVSKNLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 199 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMERE 253 >gi|219112651|ref|XP_002178077.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410962|gb|EEC50891.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 425 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 78/255 (30%), Positives = 132/255 (51%), Gaps = 31/255 (12%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLV-------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 D GWF F+ P+ +L+ ++L+ ++G+AI+L T+ +K++ FPL K Q ST Sbjct: 92 DSGWFGFLTIPIKLLLQAIHSLLLTVGLNTNSWGVAIVLLTILIKVVTFPLTKTQLESTN 151 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ +QP I EL+ K+ QS P+V+ + + + Y+T+ INPLAGC P ++QIPVF +Y+ + Sbjct: 152 KMQAMQPAIKELQAKY-QSNPEVMNQKIAEFYQTNEINPLAGCLPSIVQIPVFIGLYRAV 210 Query: 448 SISLEMRHA---------------PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 LE+ A P +G + +AAD G+ P + I Sbjct: 211 ---LELAQANKLDESFLFLPNLEGPTYG-AEPGSAADWILKGWTDGVPSLGWPDTIAFLI 266 Query: 493 WPIIMSLSMFIQMKMSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 P+ + +S ++ M++ P PA + IL +P++ + S PA L +YW +N+I Sbjct: 267 LPVFLVISQYLSMELMQPKTDDPAQQQSNAILKVLPIMIGWFSLSVPAALSVYWVINNII 326 Query: 549 SIVQQAVIMKMHGAE 563 + +I E Sbjct: 327 TTGTSLIIRNSMSVE 341 >gi|333031174|ref|ZP_08459235.1| Membrane protein oxaA [Bacteroides coprosuis DSM 18011] gi|332741771|gb|EGJ72253.1| Membrane protein oxaA [Bacteroides coprosuis DSM 18011] Length = 622 Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 86/355 (24%), Positives = 169/355 (47%), Gaps = 44/355 (12%) Query: 250 SWLGISDKYWASVFIP------SKETSFHSQ--FKYLSDGHARYQAKFSANEITILPGKS 301 +W+ +++++VFI SK TS + Y+ D A + F P Sbjct: 259 NWIAFRSQFFSTVFITDQGFKNSKLTSTPEEKGSGYIKDYKAEMKTFFD-------PSGK 311 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDWGWFYFIAKPM-----FMLMSYFYN 355 T +L+ G + T+ + D + ++D GW I K + + + + Sbjct: 312 EATQMYLYLGPNHYKTLKAIDSDKDHKWKLNSVVDLGWP--IVKQINQWFTINIFDWLTH 369 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKA 414 L + G+ +++ T+ VK + +P KK Y+S+A M+ ++P++D + K+ Q Q+ Sbjct: 370 LGMSMGVVLLIMTIIVKAIVYPATKKTYMSSAKMRVLKPQVDAINAKYPNQEDAMKKQQE 429 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R F W DL+ D F Sbjct: 430 VMSLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQESFL-WATDLSTYDALIKF 488 Query: 475 TLFGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVV 526 PF++P H+ I+ ++M+++ + K + + G Q + W MP++ Sbjct: 489 ------PFHIPLLGDHLSIFCLLMTVTNILNTKYTMAQQNTGAQPQMPAMKWMMYLMPIM 542 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 F+F L+ +P+GL Y+ S +IS++ + K E +L + N N++ Sbjct: 543 FLFILNDYPSGLCYYYFLSTLISVMTMIFLRKTTDEE-----KLLAKLEANKNTE 592 >gi|229032660|ref|ZP_04188623.1| Membrane protein oxaA 2 [Bacillus cereus AH1271] gi|228728659|gb|EEL79672.1| Membrane protein oxaA 2 [Bacillus cereus AH1271] Length = 260 Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAISQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 100 LKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 199 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMERE 253 >gi|298246125|ref|ZP_06969931.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter racemifer DSM 44963] gi|297553606|gb|EFH87471.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter racemifer DSM 44963] Length = 353 Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 79/253 (31%), Positives = 119/253 (47%), Gaps = 66/253 (26%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F + FY L G+FG+AI++ TV +KLL FPL +Q S+ M+ +QPKI E+++K Sbjct: 16 PIFNGLVVFYRLFGDFGLAIIVLTVLIKLLLFPLTLQQLRSSKAMQVLQPKIAEIKKK-- 73 Query: 405 QSPPQVLQK--AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH------- 455 P V + AM QLYK + + PLAGC P+++Q+PV + +Y + L +H Sbjct: 74 -HPGDVQSQSLAMNQLYKEYGVKPLAGCLPMVIQLPVLYGLYFAVGGILRDQHLTIETLN 132 Query: 456 -------APFWG---------------WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 APF G W L DPT+I Sbjct: 133 RELYPFVAPFKGVPDINLRWFEFLNPHWFISLGQPDPTHIL------------------- 173 Query: 494 PIIMSLSMFIQMKM-------------SPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 PI+ L+ F+ ++M +P P + + MP V +F +FPAGL + Sbjct: 174 PILAGLATFVSLRMAQPRNAQAKKDKSTPDPMVQSMQTMQYVMPFVTIFIGWTFPAGLAL 233 Query: 541 YWSWSNVISIVQQ 553 YW+ S++ VQQ Sbjct: 234 YWTVSSIFQAVQQ 246 >gi|255009561|ref|ZP_05281687.1| putative inner membrane protein translocase component YidC [Bacteroides fragilis 3_1_12] gi|313147337|ref|ZP_07809530.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136104|gb|EFR53464.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 618 Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 92/342 (26%), Positives = 175/342 (51%), Gaps = 33/342 (9%) Query: 247 ESNSWLGISDKYWASVFIPSKE---TSFHSQFKYLSDGHARYQAKFSANEITILP--GKS 301 E W+ +++++SVFI ++ T+ S+ + G+ + +SA T GK Sbjct: 249 ERLDWIAFKNQFFSSVFIAEQDFEKTTVRSKMEKQGSGYIK---DYSAEMSTFFDPTGKQ 305 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSYFYNLVG- 358 T F F G + T+ +K ++E+ L+ GW ++ ++ F L G Sbjct: 306 PTDMYFYF-GPNHYKTLTALDKGRE-EKWELNNLVYLGWPLIRWINKWITINVFDWLSGW 363 Query: 359 --NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAM 415 G+ ++L T+ VK++ FP K Y+S+A M+ ++PKIDE+ +K+ KQ Q+ + Sbjct: 364 GLGMGVVLLLLTIMVKVVVFPATWKTYMSSAKMRVLKPKIDEINKKYPKQEDAMKKQQEV 423 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY + ++P+ GC P+L+Q P+ A++ + ++E+R F W DL+ D Sbjct: 424 MGLYSQYGVSPMGGCLPMLVQFPILMALFMFVPSAIELRQQSFL-WADDLSTYDA----- 477 Query: 476 LFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW----MPVV 526 F PF++P F+ H+ ++ ++M+++ + K + D G Q + W MP++ Sbjct: 478 -FITFPFHIP-FLGNHLSLFCLLMTITNILNTKYTMQQQDTGAQPQMAAMKWMMYLMPIM 535 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 F+F L+ +P+GL Y+ S +IS+V ++ + + L D Sbjct: 536 FLFVLNDYPSGLNYYYFISTLISVVTMIILRRTTDEDKLLAD 577 >gi|163789146|ref|ZP_02183589.1| putative inner membrane protein translocase component YidC [Flavobacteriales bacterium ALC-1] gi|159875559|gb|EDP69620.1| putative inner membrane protein translocase component YidC [Flavobacteriales bacterium ALC-1] Length = 633 Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 80/267 (29%), Positives = 142/267 (53%), Gaps = 27/267 (10%) Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDL--AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G ++ L+ G + T+ YEK L +IP WG F +I K +F+ + F + Sbjct: 323 GGEVSKNFGLYYGPTDAKTLKTYEKGLEESIP-----FGWGIFGWINKAVFIPLFGFLSG 377 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GIAI++ T+ VK++ + KQ++S A MK ++P++D +R K K + + Q+ M Sbjct: 378 FLPYGIAIIVMTILVKIMLSFVQYKQFLSQAKMKILKPELDAIRAKHKDNKMKAQQETM- 436 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 L +PL+GC P L+QIPVF+A++ + E+R F W DL++ D ++ L Sbjct: 437 ALQSKAGASPLSGCLPGLMQIPVFYALFMFFPTAFELRQKSFL-WADDLSSFD--SVLDL 493 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-------------PPADKGQAMILNWM 523 +PFY HV ++PI+ ++++F MKM+ P K ++ + Sbjct: 494 PFNIPFYGD---HVSLFPILAAIAIFFYMKMTTGQQMATQPTQEGMPDMGKMMKYMIYFS 550 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISI 550 P++ + +++ +GL +Y+ SN+ISI Sbjct: 551 PLLMLVFFNNYASGLSLYYFVSNLISI 577 >gi|21592693|gb|AAM64642.1| chloroplast membrane protein ALBINO3 [Arabidopsis thaliana] Length = 462 Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 134/253 (52%), Gaps = 30/253 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M +++ + + +G AI+L T+ VK +PL K+Q ST M+ Sbjct: 111 GWFGFISDAMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQ 170 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QPKI +++++ + ++ Q +LYK ++NPLAGC P L IPV+ +Y+ +S + Sbjct: 171 NLQPKIKAIQQRYAGNQERI-QLETSRLYKQASVNPLAGCLPTLATIPVWIGLYQALSNL 229 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVG--------IWPI 495 + E + WI L PT+I + + PF + G +G + P+ Sbjct: 230 ANEGLFTEGFFWIPSLGG--PTSIAARQSGSGISWLFPF-VDGHPPLGWYDTVAYLVLPV 286 Query: 496 IMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ S ++ M+ M PP PA K ++ ++P++ + S P+GL IYW +NV+S Sbjct: 287 LLIASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWLTNNVLST 346 Query: 551 VQQAVIMKMHGAE 563 QQ + K+ GA+ Sbjct: 347 AQQVYLRKLGGAK 359 >gi|325954218|ref|YP_004237878.1| membrane protein oxaA [Weeksella virosa DSM 16922] gi|323436836|gb|ADX67300.1| Membrane protein oxaA [Weeksella virosa DSM 16922] Length = 619 Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 157/608 (25%), Positives = 264/608 (43%), Gaps = 111/608 (18%) Query: 2 ERNWNY-----FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI---QTVKQPNQVDNSY 53 ERN+++ FV IA+ + VY W P EE+ +++ + + ++ Sbjct: 4 ERNFDFNQLIGFVLIAI-LFGVYFWM---TKPSEEELARQKQELLAKEATEKNKGTQKDI 59 Query: 54 AAVLIDDRA-QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS----NSPIV 108 A D A Q + V +N + +N +G Q + L+ HL S ++ + Sbjct: 60 AQFPTDSLATQQVVKEENVTFENEHVKIQVNGRGGQIGLVQLKE-HLAFDSLKGVDAQPL 118 Query: 109 TLLSPSNTK-NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 L+ N++ N F +++ T N EL S S K+LT T I A + Sbjct: 119 YLVKDGNSQFNLSFKDIN-GKTINTKELIFSPKQEQKGSTKVLTMTAQI-----GAGQL- 171 Query: 168 FERTISLDEHYLFKIVDTVTNNSID-QIRFSPRGRIMRHKPQTATN----TFGVQEG--- 219 HY++ D +D QIR R+ H A N F +++G Sbjct: 172 ---------HYIYSFDDKY---GLDFQIRSQGLHRVT-HDKNIALNWNLDAFSLEKGKDQ 218 Query: 220 ------FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 L K+ VE + +K ES W+ +++AS+ SF Sbjct: 219 EHYWSHTYFKLSGKNSVEYELFGADKWEEK---ESIDWIAFKQQFFASIL------SFDG 269 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF--------------PTIH 319 K + G Y+ GKS F F+ E P Sbjct: 270 GLKNTNGGSINYEI-----------GKSKYNKGFNFSAPIEIKSGEINQHLSWDFVPLDF 318 Query: 320 HYEKDLAIPRFEMLIDWGWFYF--IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + K FE ++ +GW + + K F+ + + +G AI L T+ VKL+ P Sbjct: 319 NNLKKYNDKGFEKIVSYGWGFLGWLNKYFFLFIFQSLAKIVPYGWAIFLMTIVVKLVLSP 378 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL--QKAMIQLYKTHNINPLAGCWPILL 435 + KQY +A MK ++P+++EL EKFK P + Q+A +++Y+ +NPLAGC P LL Sbjct: 379 IMYKQYRQSAMMKVLRPELNELNEKFK-DPKDAMKKQQATMEIYRKAGVNPLAGCLPALL 437 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 QIP+F+A+++ +++R PFW + +DL A D ++ + +PF L G H+ I+ + Sbjct: 438 QIPIFYALFRFFPNVIDLRGEPFW-FAEDLTAFD--SVIQIPASIPF-LNG--HLSIFAL 491 Query: 496 IMSLSMFIQMKMSPP-------PADKG----QAM--ILNWMPVVFVFALSSFPAGLIIYW 542 + ++M + K+S P +G Q M ++ MP+ F L+++ +GL Y+ Sbjct: 492 LYIVAMMVYFKVSGSMDNFNNMPQQEGMPNMQFMKYMMYIMPIFFFVFLNNYASGLSWYY 551 Query: 543 SWSNVISI 550 SNVI+I Sbjct: 552 LVSNVINI 559 >gi|152977287|ref|YP_001376804.1| OxaA-like protein precursor [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026039|gb|ABS23809.1| 60 kDa inner membrane insertion protein [Bacillus cytotoxicus NVH 391-98] Length = 257 Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 126/237 (53%), Gaps = 30/237 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ L+ + ++ + G+FG+AI+L T+ V+ PLA QY S MK +QP+ Sbjct: 37 WDHYFVYPISFLLQFAHDHIAGGSFGVAIILITLLVRSAMIPLAISQYRSQMKMKQMQPE 96 Query: 396 IDELREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + L++K+ + QK M +L K+ NPLAGC PIL+Q+P+F A+Y IS + Sbjct: 97 LQRLKDKYGDVSKDIEKQKEYQKEMSKLMKSGGWNPLAGCLPILIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E+R + F W+ +L AD P+Y I P++ + + F+QMK+ Sbjct: 157 EEIRTSSFL-WV-NLGHAD-----------PYY--------ILPMLAAFTTFLQMKVMQT 195 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 D+ Q + + MP + +F + P+GL++YW N +++Q ++ K E G Sbjct: 196 SKDQVQMLKIQQFMMPAMILFMGFAAPSGLVLYWVTGNTFTMMQTIILRKFMEHEQG 252 >gi|110638943|ref|YP_679152.1| putative inner membrane protein translocase component YidC [Cytophaga hutchinsonii ATCC 33406] gi|123058652|sp|Q11S04|OXAA_CYTH3 RecName: Full=Inner membrane protein oxaA gi|110281624|gb|ABG59810.1| protein translocase subunit yidC [Cytophaga hutchinsonii ATCC 33406] Length = 620 Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 100/372 (26%), Positives = 186/372 (50%), Gaps = 40/372 (10%) Query: 204 RHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVF 263 + + ++ N ++GF + + D E ++SN + W+ + K++ S F Sbjct: 215 QARVKSTVNYMAAEDGF-------DYLSEASKDRETETLSNVY----WVSLKQKFFNSGF 263 Query: 264 -------IPSKETSFHSQFKYLSDGHARYQAKFSANEITI-LPGKSITTTNFLFA---GA 312 IPS + + + L + + A E + LP +++ + +A G Sbjct: 264 YIREGGTIPSATVTAYPMYSTLPNAPVNSEKFIKALEAQVQLPLEAVISGKAAYAFYFGP 323 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTV 369 +F K + ++ ++ GW F+++ F L G +FG+ I++ + Sbjct: 324 NDFKIC----KAVPAENYQKNVNLGWPLVSWINRFVVIPVFDGLKGVFSSFGLIIVILVL 379 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +KL+ PL+ K +VS A MK ++P++DEL+ K Q +Q +Q+YK INPL+G Sbjct: 380 LIKLVLLPLSYKSFVSMAKMKALKPELDELKAKHGDDQ-QAIQMEQMQVYKQFGINPLSG 438 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-M 488 C P+LLQ+P+ A++ ++++R W W DL++ D F LPF +P + Sbjct: 439 CIPVLLQMPILLAMFNFFPNAIDLRGESLW-WATDLSSYDE------FAKLPFTIPFYGS 491 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPAD-KGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSN 546 HV ++ ++M++S ++ + G +++ MPVVF+F L+SFPAGL Y+ SN Sbjct: 492 HVSMFTLLMTISTLAYTWVNNQVSTVTGPMKYMSYAMPVVFLFVLNSFPAGLSFYYFVSN 551 Query: 547 VISIVQQAVIMK 558 +++I QQ +I + Sbjct: 552 LVTIAQQLIIRR 563 >gi|228955284|ref|ZP_04117292.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804417|gb|EEM51028.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 262 Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/235 (32%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ +M+ +++ G +FG+AI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 42 YFVYPISYMIQFVAHHIPGASFGVAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 101 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 102 LKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 162 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 200 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 201 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 255 >gi|206970211|ref|ZP_03231164.1| stage III sporulation protein J [Bacillus cereus AH1134] gi|229072507|ref|ZP_04205709.1| Membrane protein oxaA 2 [Bacillus cereus F65185] gi|229082266|ref|ZP_04214729.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-2] gi|229181313|ref|ZP_04308643.1| Membrane protein oxaA 2 [Bacillus cereus 172560W] gi|229193300|ref|ZP_04320251.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 10876] gi|206734788|gb|EDZ51957.1| stage III sporulation protein J [Bacillus cereus AH1134] gi|228590277|gb|EEK48145.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 10876] gi|228602206|gb|EEK59697.1| Membrane protein oxaA 2 [Bacillus cereus 172560W] gi|228700698|gb|EEL53221.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-2] gi|228710483|gb|EEL62456.1| Membrane protein oxaA 2 [Bacillus cereus F65185] Length = 260 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/235 (32%), Positives = 128/235 (54%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ +M+ +++ G +FG+AI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISYMIQFVAHHIPGASFGVAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 100 LKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 198 Query: 511 PADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 199 PGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|310644873|ref|YP_003949632.1| membrane protein insertase, yidc/oxa1 family [Paenibacillus polymyxa SC2] gi|309249824|gb|ADO59391.1| Membrane protein insertase, YidC/Oxa1 family [Paenibacillus polymyxa SC2] Length = 288 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 121/225 (53%), Gaps = 28/225 (12%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G +G+A+++ + V+ + PL KQ S+ M+ IQP++ E++ K+K +P +V Q+ M + Sbjct: 67 GEYGLAVLILVIIVRTIILPLTLKQVRSSRAMQAIQPQLKEIQAKYKDTPERVQQETM-K 125 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR-HAPFWGWIKDLAAADPTNIFTL 476 L++ + +NP+AGC P+L+Q+P+F A+Y I + +R H W L P + F L Sbjct: 126 LFQENKVNPMAGCLPLLVQMPIFIALYNAIYYNSALRDHDFLW-----LQLGKPDHFFIL 180 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQ----MKMSPPPADKGQAMILNWMPVVFVFALS 532 PI+ +++ FIQ MKM+P P +L PV+ +F Sbjct: 181 -----------------PILAAITTFIQTWMMMKMNPTPQQGPMQFLLYVYPVLILFMSY 223 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +FP+ L +YW +SN+ +IVQ + + + + L + ++ +K Sbjct: 224 NFPSALPLYWFFSNIYTIVQNYFLYRNNDKDAALANVKTASLTKT 268 >gi|296126151|ref|YP_003633403.1| membrane protein insertase, YidC/Oxa1 family [Brachyspira murdochii DSM 12563] gi|296017967|gb|ADG71204.1| membrane protein insertase, YidC/Oxa1 family [Brachyspira murdochii DSM 12563] Length = 626 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 81/279 (29%), Positives = 145/279 (51%), Gaps = 20/279 (7%) Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF----MLM 350 +I G SIT T +F G K + K A +E + + +P+ +++ Sbjct: 335 SIKSGSSITDTYSVFMGPK---VRRLFSKYYAEESYESIFQESFLGINLRPLTYILDIML 391 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + YN+ N+ AI+L T+ K++ FPL Y S M+ + PKI+ +RE++K +P + Sbjct: 392 NGLYNITKNYAWAILLFTLLFKIITFPLNNASYKSMKKMQLVNPKIERIREQYKDNPDK- 450 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 L ++ +YK INPL GC P+LL P+ A + ++ +E+R+ PF WI DL++ P Sbjct: 451 LNAEIMAIYKKEKINPLGGCLPMLLPFPLLIAFFYLMQSMVELRNTPFL-WITDLSS--P 507 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-------QAMILNWM 523 +F +P L GF + ++PI+M+++ ++ MK+ P + G M+ Sbjct: 508 DRLFVFPAGMPI-LGGF-NFNLFPILMAVTSYLSMKLQPSSSAGGSSSAAAQMKMMTTIF 565 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P++ + +F +GL +YW+ NV + QQ + K+ + Sbjct: 566 PLIMLLMFYNFASGLALYWTAQNVFGVAQQFITSKLDKS 604 >gi|194702082|gb|ACF85125.1| unknown [Zea mays] Length = 455 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 132/252 (52%), Gaps = 28/252 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ + +++ + + ++G AI+L T+ VK PL KKQ ST M+ Sbjct: 105 GWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVESTLAMQ 164 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QP+I +++++ + ++ Q +LYK +NPLAGC+P L IPV+ +Y+ +S + Sbjct: 165 NLQPQIKAIQQRYAGNQERI-QLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 223 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT---------LFGILPFYLPGFMHVGIW----PII 496 + E + WI L PT I LF + + P H I P++ Sbjct: 224 ANEGLLTEGFFWIPSLGG--PTTIAARQSGSGITWLFPFVDGHPPLGWHDTICYLVLPVL 281 Query: 497 MSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + S ++ M+ M PP P+ K +IL ++P + + S P+GL IYW +NV+S Sbjct: 282 LVASQYVSMEIMKPPQSDDPSQKNTMLILKFLPFMIGWFSLSVPSGLSIYWFTNNVLSTA 341 Query: 552 QQAVIMKMHGAE 563 QQ + KM GA+ Sbjct: 342 QQVWLRKMGGAK 353 >gi|295400330|ref|ZP_06810309.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus thermoglucosidasius C56-YS93] gi|312111144|ref|YP_003989460.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y4.1MC1] gi|294977605|gb|EFG53204.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus thermoglucosidasius C56-YS93] gi|311216245|gb|ADP74849.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y4.1MC1] Length = 251 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 124/230 (53%), Gaps = 29/230 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ PM L+ + GN +G+AI++ T+ V+ PL KQ+ +T M+ ++P++ Sbjct: 32 WDHYFVYPMSKLLLTLGHFFGNNYGVAIIVLTLIVRFCLLPLMIKQFKTTIAMQKLRPEL 91 Query: 397 DELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+K + + LQ+ M+QLY+ H +NP +GC P+L+Q P+F A+Y I + E+ Sbjct: 92 QKLQEKYKGTDLEAQRKLQQEMMQLYQKHGVNPASGCLPVLIQTPIFMALYYAILRTQEI 151 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W++ L DP I PI+ SL+ FI +++SP + Sbjct: 152 KLHSFL-WVQ-LGHRDPYFIL-------------------PILASLTTFISLRLSPSMTE 190 Query: 514 K---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + AM+ MP++ SS P+ L +YW SI+ Q++I++M Sbjct: 191 EQMPQMAMMSYIMPIMIFIGASSVPSALSLYWVVGGCFSII-QSLILRMQ 239 >gi|108805126|ref|YP_645063.1| 60 kDa inner membrane insertion protein [Rubrobacter xylanophilus DSM 9941] gi|108766369|gb|ABG05251.1| 60 kDa inner membrane insertion protein [Rubrobacter xylanophilus DSM 9941] Length = 246 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/225 (32%), Positives = 115/225 (51%), Gaps = 26/225 (11%) Query: 342 IAKPMFMLMS----YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 I P+F L+ F+ + +AI + TV V+ + FPL +Q S M+ ++P+ID Sbjct: 8 IFDPLFSLLGGMLFTFHGWGAPWWLAIAMLTVVVRAVLFPLTFRQVKSMRRMQELKPEID 67 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRH 455 E+R + K P Q Q+ M++LY NINPL GC P L+Q+P+F +Y I LE Sbjct: 68 EIRRRHKDDP-QRQQQEMMKLYGERNINPLGGCLPALVQLPIFLVLYYTIKEFEHLESFR 126 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 W DL A DP F L P++ L++ +++ + Sbjct: 127 TGGLLWFDDLTAYDP--YFAL-----------------PVVYVLTLMAAQEITIRNTNPQ 167 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 Q ++ +PVVF L+ FPAGL +Y+ SN+IS++Q +I ++H Sbjct: 168 QRQLMRALPVVFGVVLARFPAGLFVYYITSNLISVLQNLLIYRLH 212 >gi|297826255|ref|XP_002881010.1| hypothetical protein ARALYDRAFT_901831 [Arabidopsis lyrata subsp. lyrata] gi|297326849|gb|EFH57269.1| hypothetical protein ARALYDRAFT_901831 [Arabidopsis lyrata subsp. lyrata] Length = 458 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 30/253 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M +++ + + +G AI+L T+ VK +PL K+Q ST M+ Sbjct: 107 GWFGFISDGMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQ 166 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QPKI +++++ + ++ Q +LYK +NPLAGC P L IPV+ +Y+ +S + Sbjct: 167 NLQPKIKAIQQRYAGNQERI-QLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNV 225 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVG--------IWPI 495 + E + WI L PT I + + PF + G +G + P+ Sbjct: 226 ANEGLLTEGFFWIPSLGG--PTTIAARQSGSGISWLFPF-VDGHPPLGWYDTAAYLVLPV 282 Query: 496 IMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ S ++ M+ M PP PA K ++ ++P++ + S P+GL IYW +NV+S Sbjct: 283 LLIASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWFTNNVLST 342 Query: 551 VQQAVIMKMHGAE 563 QQ + K+ GA+ Sbjct: 343 AQQVYLRKLGGAK 355 >gi|159901883|gb|ABX10617.1| 60 kDa inner membrane insertion protein [uncultured planctomycete 6N14] Length = 818 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 99/371 (26%), Positives = 176/371 (47%), Gaps = 53/371 (14%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA-------RYQAK-----FSANEIT-- 295 S++G+ +Y+ F+P++ + + G A ++Q + F + ++ Sbjct: 438 SYVGVDSQYFTVAFVPAEGQASLTTLDRGGAGIASDPAAIIKHQERAVNSTFYVDTLSKS 497 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG S+ LFAG K + Y + I +GWF IAK + L+ + + Sbjct: 498 LEPGGSMRQDLRLFAGPKYTSLLTQYG-------LQDCIYYGWFSAIAKFLGGLL-HGLS 549 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+ +AI+L T+ V+ FPL++K V+ M+ + P++ ++ EK+K L KA Sbjct: 550 AVGNYALAIILLTLLVRGCMFPLSRKAAVNAQRMQELAPEMKKINEKYKDDMEGKL-KAQ 608 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP---FWGWIKDLAAADPTN 472 +L + +NPLAGC P+ +Q+P+F +Y+ +S+++EMR P F W +LA D Sbjct: 609 RELQQRVGLNPLAGCLPMFIQLPIFLGLYRTLSVNIEMRQQPALSFSDWASNLAGPDKLA 668 Query: 473 IFT--LFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 + L+ L G++ + + P+I+ + Q K+ PPA Q + M V Sbjct: 669 YWGDWLWEYLSGRGTGWLGPYFNVLPVIVVVLYLTQQKLFMPPATDEQTALTQKMMSVMT 728 Query: 529 FALSSF----PAGLIIYWSWSNVISIVQQAVIMK---------MHGAEIG---------- 565 + F PAGL IY+ S+ I ++ ++ + + G E G Sbjct: 729 LMMGLFFFRVPAGLCIYFITSSAWGICERIIVKRTLPSKKHFDLAGLEGGKGAAPVKSQS 788 Query: 566 LIDRLRSTFSK 576 L +R+RS +K Sbjct: 789 LAERIRSQVAK 799 >gi|313621678|gb|EFR92461.1| stage III sporulation protein J [Listeria innocua FSL S4-378] Length = 287 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 123/226 (54%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++++F +L G N+ + I++ T+ ++LL PL KQ S M ++QPKI Sbjct: 42 WSHYIVFPLSWVITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L D P+Y I PI+ +L+ F+ K M Sbjct: 162 KTDSFL-WMQ-LGNPD-----------PYY--------ILPIVAALTTFLSSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLI 246 >gi|229020261|ref|ZP_04177030.1| Membrane protein oxaA 2 [Bacillus cereus AH1273] gi|229026485|ref|ZP_04182840.1| Membrane protein oxaA 2 [Bacillus cereus AH1272] gi|228734793|gb|EEL85433.1| Membrane protein oxaA 2 [Bacillus cereus AH1272] gi|228741014|gb|EEL91243.1| Membrane protein oxaA 2 [Bacillus cereus AH1273] Length = 262 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 76/238 (31%), Positives = 127/238 (53%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + G+FGIAI++ T+ V+ PLA QY S MK +QP+ Sbjct: 39 WNHYFVYPISFMIQFVAHHIPGGSFGIAIIVITLVVRSAMIPLAVSQYRSQMKMKKMQPE 98 Query: 396 IDELREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 99 LQKLKKKHGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + F W+ +L ADP +I PII +L+ FIQMK+ Sbjct: 159 EEIRTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 508 SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 198 NVTPGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMERE 255 >gi|16802044|ref|NP_472312.1| hypothetical protein lin2986 [Listeria innocua Clip11262] gi|38503122|sp|Q926Q5|OXAA1_LISIN RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|16415526|emb|CAC98211.1| lin2986 [Listeria innocua Clip11262] Length = 287 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 123/226 (54%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++++F +L G N+ + I++ T+ ++LL PL KQ S M ++QPKI Sbjct: 42 WSHYIVFPLSWVITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L D P+Y I PI+ +L+ F+ K M Sbjct: 162 KTDTFL-WMQ-LGNPD-----------PYY--------ILPIVAALTTFLSSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLI 246 >gi|328946937|ref|YP_004364274.1| Membrane protein oxaA [Treponema succinifaciens DSM 2489] gi|328447261|gb|AEB12977.1| Membrane protein oxaA [Treponema succinifaciens DSM 2489] Length = 602 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 150/598 (25%), Positives = 262/598 (43%), Gaps = 70/598 (11%) Query: 1 MERNWNYFVAIALSVIIVYAW---QNFYVYPRIEEMNNERK------------NIQTVKQ 45 ME+N +AIALS I++ Q YV PR +E E+ I+ K+ Sbjct: 1 MEKN--TILAIALSTIVLVVSLFIQTKYVMPRQQERAREQAAEFEAKKEEQEAQIKAEKE 58 Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 S A V + Q +S N + + N +G L H D + S Sbjct: 59 MISASFSEATVQNSEDVQEFVIST-----NKAKVTFTN-RGGDITSYKLL-EHKDKETGS 111 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 + + + +++ A+ L + T N P N ++N+ T K++ Sbjct: 112 GVEMVNNVTSSNRAF--SLSFCGTEN----PALNDIFNVTKKDDYTILFYRDYEIKDSEG 165 Query: 166 -----ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA-----TNTFG 215 L +R + Y FK+ ++ + + +R PQ N + Sbjct: 166 NPKKFTLGKRYTFSPDDYAFKLDVSIISKEGGEFGIGGAAYTLRTAPQIGPKYDKKNRYE 225 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS--WLGISDKYWASVFIPSKETSFHS 273 V++ F+A+ G K K+ F++ NS W G+ KY+ + PS + Sbjct: 226 VRQ-FLALNGGKKF--------RKNISDKFYDLNSVDWAGVGGKYFTMLVKPSSPSDMLG 276 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK------DLAI 327 + K + + +L S T +++ G ++ + Y +L+ Sbjct: 277 KIKVSTKSENEDGCQIFIPRKPVLDETS-NDTYYIYVGPRQERELIKYNDQTKNAWNLSN 335 Query: 328 PRF-EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 +F E L G+ +I + + + N+GI+I++ T+ +K++ FPL K V + Sbjct: 336 AKFNEALQTTGFLSWIEIILKWCLEKINLIAHNWGISIIILTILLKIVLFPLNKNAAVGS 395 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ IQPK+ L+EK+K + Q L M +LYK NP++GC P+++Q+ + FA+Y V Sbjct: 396 LKMQKIQPKMKVLQEKYK-NDQQKLSMEMQKLYKEAGYNPMSGCLPMVVQMFILFALYNV 454 Query: 447 ISISLEMRHAPF-WGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQ 504 + E R A F GWI+DL+A D +I+T +PF M ++ + P I + S + Sbjct: 455 FNNYFEFRGASFVKGWIEDLSAGD--SIWTWKRNIPFISAFTMNNLRLLPFIYTASQLLN 512 Query: 505 MKMSP---PPADKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 K++ P Q+ ++ MP++F F + P+GL++YW+ SN+I I QQ VI Sbjct: 513 GKITQYGNPGTGANQSQMKFMMYGMPLMFFFLFYNVPSGLLLYWAVSNIIQIGQQLVI 570 >gi|226530665|ref|NP_001150593.1| inner membrane protein ALBINO3 [Zea mays] gi|195640414|gb|ACG39675.1| inner membrane protein ALBINO3 [Zea mays] Length = 449 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 132/252 (52%), Gaps = 28/252 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ + +++ + + ++G AI+L T+ VK PL KKQ ST M+ Sbjct: 101 GWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVESTLAMQ 160 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QP+I +++++ + ++ Q +LYK +NPLAGC+P L IPV+ +Y+ +S + Sbjct: 161 NLQPQIKAIQQRYAGNQERI-QLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 219 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT---------LFGILPFYLPGFMHVGIW----PII 496 + E + WI L PT I LF + + P H I P++ Sbjct: 220 ANEGLLTEGFFWIPSLGG--PTTIAARQSGSGITWLFPFVDGHPPLGWHDTICYLVLPVL 277 Query: 497 MSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + S ++ M+ M PP P+ K +IL ++P + + S P+GL IYW +NV+S Sbjct: 278 LVASQYVSMEIMKPPQSDDPSQKNTMLILKFLPFMIGWFSLSVPSGLSIYWFTNNVLSTA 337 Query: 552 QQAVIMKMHGAE 563 QQ + KM GA+ Sbjct: 338 QQVWLRKMGGAK 349 >gi|42784207|ref|NP_981454.1| OxaA-like protein precursor [Bacillus cereus ATCC 10987] gi|42740138|gb|AAS44062.1| stage III sporulation protein J [Bacillus cereus ATCC 10987] Length = 260 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 125/235 (53%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 100 LKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F W+ +L ADP +I PII +L+ FIQMK+ Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNIT 198 Query: 514 KG-QAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 G Q +L MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 199 AGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMERE 253 >gi|15618230|ref|NP_224515.1| putative inner membrane protein translocase component YidC [Chlamydophila pneumoniae CWL029] gi|4376587|gb|AAD18459.1| 60 kDa Inner Membrane Protein [Chlamydophila pneumoniae CWL029] Length = 795 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 103/341 (30%), Positives = 174/341 (51%), Gaps = 38/341 (11%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHA--RYQAKFSANEI----------TILP 298 W+ S+ Y+ + P E + Y+S A R A N++ T+LP Sbjct: 443 WILNSNGYFGIILTPLSEIASGYGSLYISGSTAPTRLSAISPKNQLYPVSKYPGYETLLP 502 Query: 299 -GKSITTTNFL-FAGAKEFPTIHHYEKDLAIPRFE--MLID----WGWFYFIAKP----M 346 K T FL +AG PT+ +K + + E +D G F FI P + Sbjct: 503 LPKDAGTHRFLVYAGPLAEPTLKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAALL 562 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F + G++GI+I+L TVF+KLL +PL S M+ + P I ++++K+K Sbjct: 563 FIIMKFFKLVTGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKNE 622 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + Q ++ LYKT+ +NP+ GC P+L+Q+P A++ ++ S +R A F GWI +L Sbjct: 623 PKRA-QMEIMGLYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNL 681 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQAM 518 A D + + +++ H + PI++ + MF+Q K++ P D K Q + Sbjct: 682 TAPD---VLFSWQTSIWFIGNEFH--LLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQV 736 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + N M ++F +FP+GL IYW S ++ +VQQ + K+ Sbjct: 737 MGNMMAILFTAMFYNFPSGLNIYWLSSMILGVVQQWITNKI 777 >gi|269303185|gb|ACZ33285.1| inner membrane protein [Chlamydophila pneumoniae LPCoLN] Length = 795 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 103/341 (30%), Positives = 174/341 (51%), Gaps = 38/341 (11%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHA--RYQAKFSANEI----------TILP 298 W+ S+ Y+ + P E + Y+S A R A N++ T+LP Sbjct: 443 WILNSNGYFGIILTPLSEIASGYGSLYISGSTAPTRLSAISPKNQLYPASKYPGYETLLP 502 Query: 299 -GKSITTTNFL-FAGAKEFPTIHHYEKDLAIPRFE--MLID----WGWFYFIAKP----M 346 K T FL +AG PT+ +K + + E +D G F FI P + Sbjct: 503 LPKDAGTHRFLVYAGPLAEPTLKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAALL 562 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F + G++GI+I+L TVF+KLL +PL S M+ + P I ++++K+K Sbjct: 563 FIIMKFFKLVTGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKNE 622 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + Q ++ LYKT+ +NP+ GC P+L+Q+P A++ ++ S +R A F GWI +L Sbjct: 623 PKRA-QMEIMGLYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNL 681 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQAM 518 A D + + +++ H + PI++ + MF+Q K++ P D K Q + Sbjct: 682 TAPD---VLFSWQTSIWFIGNEFH--LLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQV 736 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + N M ++F +FP+GL IYW S ++ +VQQ + K+ Sbjct: 737 MGNMMAILFTAMFYNFPSGLNIYWLSSMILGVVQQWITNKI 777 >gi|15835845|ref|NP_300369.1| putative inner membrane protein translocase component YidC [Chlamydophila pneumoniae J138] gi|16752729|ref|NP_444996.1| putative inner membrane protein translocase component YidC [Chlamydophila pneumoniae AR39] gi|38502924|sp|Q7VQ46|OXAA_CHLPN RecName: Full=Inner membrane protein oxaA gi|7189370|gb|AAF38286.1| inner membrane protein, putative [Chlamydophila pneumoniae AR39] gi|8978684|dbj|BAA98520.1| 60 kDa inner membrane protein [Chlamydophila pneumoniae J138] Length = 795 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 103/341 (30%), Positives = 174/341 (51%), Gaps = 38/341 (11%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHA--RYQAKFSANEI----------TILP 298 W+ S+ Y+ + P E + Y+S A R A N++ T+LP Sbjct: 443 WILNSNGYFGIILTPLSEIASGYGSLYISGSTAPTRLSAISPKNQLYPVSKYPGYETLLP 502 Query: 299 -GKSITTTNFL-FAGAKEFPTIHHYEKDLAIPRFE--MLID----WGWFYFIAKP----M 346 K T FL +AG PT+ +K + + E +D G F FI P + Sbjct: 503 LPKDAGTHRFLVYAGPLAEPTLKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAALL 562 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F + G++GI+I+L TVF+KLL +PL S M+ + P I ++++K+K Sbjct: 563 FIIMKFFKLVTGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKNE 622 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + Q ++ LYKT+ +NP+ GC P+L+Q+P A++ ++ S +R A F GWI +L Sbjct: 623 PKRA-QMEIMGLYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNL 681 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQAM 518 A D + + +++ H + PI++ + MF+Q K++ P D K Q + Sbjct: 682 TAPD---VLFSWQTSIWFIGNEFH--LLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQV 736 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + N M ++F +FP+GL IYW S ++ +VQQ + K+ Sbjct: 737 MGNMMAILFTAMFYNFPSGLNIYWLSSMILGVVQQWITNKI 777 >gi|168063889|ref|XP_001783900.1| predicted protein [Physcomitrella patens subsp. patens] gi|162664583|gb|EDQ51297.1| predicted protein [Physcomitrella patens subsp. patens] Length = 321 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 77/255 (30%), Positives = 131/255 (51%), Gaps = 30/255 (11%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGI------AIMLTTVFVKLLFFPLAKKQYVSTAN 388 D GW ++ + + +++ + + GI AI+L T+ VK +PL KKQ ST Sbjct: 7 DGGWLGGVSNSLEIALTFLKDTIAKLGIPYSYGFAIILLTILVKAATYPLTKKQVESTLA 66 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+N+QPKI ++ ++ Q + +Q +LYK +NPLAGC P L +PV+ +Y+ +S Sbjct: 67 MQNLQPKIKAIQTRY-QGDQERIQLETARLYKQAGVNPLAGCLPTLATLPVWIGLYRALS 125 Query: 449 -ISLEMRHAPFWGWIKDLAAADPTNIFTLFG------ILPFYLPGFMHVG--------IW 493 ++ E + WI LA PT I + PF + G +G + Sbjct: 126 NVANEGLLTEGFFWIPSLAG--PTTIAARSSGSGISWLFPF-VDGAPSLGWADTIAYLVL 182 Query: 494 PIIMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 P+++ S ++ M+ M PP PA +IL ++P++ + S P+GL +YW +NV+ Sbjct: 183 PVLLIGSQYVSMQIMQPPTTNDPAQNQSQLILKFLPLMIGYFSLSVPSGLSLYWLTNNVL 242 Query: 549 SIVQQAVIMKMHGAE 563 S QQ + ++ GA+ Sbjct: 243 STAQQVYLRQLGGAQ 257 >gi|323703944|ref|ZP_08115574.1| membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum nigrificans DSM 574] gi|323531102|gb|EGB21011.1| membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum nigrificans DSM 574] Length = 229 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 126/231 (54%), Gaps = 30/231 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +GWF +I M LM+ Y V ++ +AI++ TV +K+ +PL+KKQ S M+ Sbjct: 2 FGWFDYIKTGMTDLMNLLYGFTVQIGVPSYALAIIILTVIIKMALYPLSKKQMRSMVMMQ 61 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P+I ++++K+K PQ +Q+ +++LYK +N+NP+AGC P+L+Q+P+ A+Y+ + + Sbjct: 62 KLAPEIKQIQDKYKGKDPQKMQQMIMELYKENNVNPMAGCLPLLIQMPILIALYRALY-A 120 Query: 451 LEMR---HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + HA F W++ L+ G +P I+ + + ++Q ++ Sbjct: 121 FPFKNPAHAHFL-WVESLSKT---------GDIPL-----------AILAAATTYLQSRL 159 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + D+ Q +L MP+ + + PAGL +YW N++ +QQ I K Sbjct: 160 TTNTQDQTQRTMLYMMPLFIGWIAYTVPAGLALYWVVFNIVGTIQQWFINK 210 >gi|33241654|ref|NP_876595.1| putative inner membrane protein translocase component YidC [Chlamydophila pneumoniae TW-183] gi|33236163|gb|AAP98252.1| 60kDa inner membrane protein [Chlamydophila pneumoniae TW-183] Length = 790 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 103/341 (30%), Positives = 174/341 (51%), Gaps = 38/341 (11%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHA--RYQAKFSANEI----------TILP 298 W+ S+ Y+ + P E + Y+S A R A N++ T+LP Sbjct: 438 WILNSNGYFGIILTPLSEIASGYGSLYISGSTAPTRLSAISPKNQLYPVSKYPGYETLLP 497 Query: 299 -GKSITTTNFL-FAGAKEFPTIHHYEKDLAIPRFE--MLID----WGWFYFIAKP----M 346 K T FL +AG PT+ +K + + E +D G F FI P + Sbjct: 498 LPKDAGTHRFLVYAGPLAEPTLKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAALL 557 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F + G++GI+I+L TVF+KLL +PL S M+ + P I ++++K+K Sbjct: 558 FIIMKFFKLVTGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKNE 617 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + Q ++ LYKT+ +NP+ GC P+L+Q+P A++ ++ S +R A F GWI +L Sbjct: 618 PKRA-QMEIMGLYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNL 676 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQAM 518 A D + + +++ H + PI++ + MF+Q K++ P D K Q + Sbjct: 677 TAPD---VLFSWQTSIWFIGNEFH--LLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQV 731 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + N M ++F +FP+GL IYW S ++ +VQQ + K+ Sbjct: 732 MGNMMAILFTAMFYNFPSGLNIYWLSSMILGVVQQWITNKI 772 >gi|299137229|ref|ZP_07030411.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX8] gi|298600634|gb|EFI56790.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX8] Length = 561 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 112/422 (26%), Positives = 196/422 (46%), Gaps = 49/422 (11%) Query: 146 SGKILTPTTPIKLVFK-NANNILFERTISLDEHYLFKIVDTVTNNS--IDQIRFSPRGRI 202 SG+++ P KL F + + +T + D+ Y+ VT++ + P G Sbjct: 151 SGRLVAPG---KLTFTYSEGGVSVIKTFTFDQSYIVGADILVTDHGMPVAASLCWPSGL- 206 Query: 203 MRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASV 262 Q + V F A L K V Q I + S + G+SD Y+A++ Sbjct: 207 ---GDQETLQNYNVDGRFDASLNGK-FVSQTVKSITTGVVQA--GSYDYAGVSDLYFAAI 260 Query: 263 FIP--SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF-----LFAGAKE- 314 F+P S +T+ + +S Q + +++ +PG ++ LFAG K Sbjct: 261 FLPEHSTKTTVLNLRNEISIPRTNGQTHSALSDVVSVPGVAVGNGEGHIRLRLFAGPKAI 320 Query: 315 --FPTIHHYEKD--LAIPRFEMLIDWGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTV 369 ++H D L P E L+ +G +AKP+F+ +++ + +LV ++G AI++ T+ Sbjct: 321 ELLSSVHALAPDGSLTGPDLEPLVRFGLLRIVAKPLFLALNWIHVHLVHSWGWAILILTL 380 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQ--KAMIQLYKTHNI 424 F+ L+ P K S M++IQP+I+ +R +FK P +L+ K + L K I Sbjct: 381 FINLVLMPTRIKSMRSQLKMQHIQPQINAIRARFKDCKMGDPHLLEMNKEIFDLQKKEGI 440 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 N G P+LLQ+P+ + Y+++ +E+RHA W W+ DL++ DP ++ +F ++ +L Sbjct: 441 NVFGGMLPLLLQMPLLYGFYRMLQNVIELRHAE-WLWLHDLSSLDPLHVLPVFFVVTMFL 499 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 L + + P K A++L PV+ F AGL +YWS+ Sbjct: 500 --------------LQLLTPSSGTDPVQRKMMALVL---PVLGFFMTWKVGAGLALYWSF 542 Query: 545 SN 546 N Sbjct: 543 GN 544 >gi|255016877|ref|ZP_05289003.1| SpoIIIJ protein [Listeria monocytogenes FSL F2-515] Length = 297 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 122/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L D P+Y I P++ +L+ F+ K M Sbjct: 162 KTDSFL-WMQ-LGNPD-----------PYY--------ILPVVAALTTFLSSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLI 246 >gi|237804596|ref|YP_002888750.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis B/TZ1A828/OT] gi|231272896|emb|CAX09807.1| inner membrane protein [Chlamydia trachomatis B/TZ1A828/OT] Length = 787 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 91/282 (32%), Positives = 151/282 (53%), Gaps = 26/282 (9%) Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLA-----IPRFEMLIDW-GWFYFIAKP----M 346 LP ++ ++AG PT+ ++ A P + I + G+F FI +P + Sbjct: 497 LPKEAGRYQFMVYAGPLADPTLKALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALL 556 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F L G++GI+I+L T+ +KLL +PL S M+ + P I E+++K+K+ Sbjct: 557 FVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKRE 616 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + Q ++ LYK + +NP+ GC P+L+QIP A++ ++ S +R A F GWI +L Sbjct: 617 PKRA-QMEIMALYKMNKVNPITGCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNL 675 Query: 466 AAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQA 517 A D LF P + G + PI++ + MF Q K+S P +D + Q Sbjct: 676 TAPD-----VLFSWETPIWFIG-KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQE 729 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + M ++F F +FP+GL IYW S ++ +VQQ V K+ Sbjct: 730 AMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVVQQWVTNKI 771 >gi|328950558|ref|YP_004367893.1| membrane protein insertase, YidC/Oxa1 family [Marinithermus hydrothermalis DSM 14884] gi|328450882|gb|AEB11783.1| membrane protein insertase, YidC/Oxa1 family [Marinithermus hydrothermalis DSM 14884] Length = 449 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 124/218 (56%), Gaps = 28/218 (12%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + +M Y GN+G+AI++ T+FV+LL +PL +Q+ S A + ++P +DE+ +K+K Sbjct: 251 LIYIMETAYRFTGNWGLAILVLTLFVRLLLWPLMHQQFKSMAELNRLKPLMDEINKKYKN 310 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 P + +A++++Y+ H +NP +GC P+ +Q+P+ F +++VI+ + E + W+ DL Sbjct: 311 DPEK-RTEALMKMYQEHKVNPASGCLPLFIQLPILFILWRVIA-NFEFGQG--FLWLPDL 366 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN--WM 523 A D P+Y+ ++VG+ I+ +L M A + +I +M Sbjct: 367 ALPD-----------PYYILPILYVGVM-IVQTLLM----------AHGNKDIIRQSIFM 404 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + FV+ + FP+G+ +YW +S +I + QQ +I K G Sbjct: 405 NLFFVYLVLQFPSGVTLYWVFSTLIGLGQQLLINKQLG 442 >gi|166154462|ref|YP_001654580.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis 434/Bu] gi|166155337|ref|YP_001653592.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|165930450|emb|CAP03943.1| inner membrane protein [Chlamydia trachomatis 434/Bu] gi|165931325|emb|CAP06897.1| inner membrane protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 787 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 91/282 (32%), Positives = 151/282 (53%), Gaps = 26/282 (9%) Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM--LID----WGWFYFIAKP----M 346 LP ++ ++AG PT+ ++ A + E ID G+F FI +P + Sbjct: 497 LPKEAGRYQFMVYAGPLADPTLKTLDRANANSKGETPEYIDAIAFRGFFSFITEPFAALL 556 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F L G++GI+I+L T+ +KLL +PL S M+ + P I E+++K+K+ Sbjct: 557 FVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKRE 616 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + Q ++ LYK + +NP+ GC P+L+QIP A++ ++ S +R A F GWI +L Sbjct: 617 PKRA-QMEIMALYKMNKVNPITGCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNL 675 Query: 466 AAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQA 517 A D LF P + G + PI++ + MF Q K+S P +D + Q Sbjct: 676 TAPD-----VLFSWETPIWFIG-KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQE 729 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + M ++F F +FP+GL IYW S ++ ++QQ V K+ Sbjct: 730 AMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQQWVTNKI 771 >gi|47093230|ref|ZP_00231003.1| spoJ protein [Listeria monocytogenes str. 4b H7858] gi|47018424|gb|EAL09184.1| spoJ protein [Listeria monocytogenes str. 4b H7858] Length = 267 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 122/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 22 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 81 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 82 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 141 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L D P+Y I P++ +L+ F+ K M Sbjct: 142 KTDSFL-WMQ-LGNPD-----------PYY--------ILPVVAALTTFLSSKISMMGQT 180 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 181 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLI 226 >gi|125569047|gb|EAZ10562.1| hypothetical protein OsJ_00395 [Oryza sativa Japonica Group] Length = 952 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 135/253 (53%), Gaps = 30/253 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ + +++ + + ++G AI+L TV VK PL K+Q ST M+ Sbjct: 575 GWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQ 634 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QP+I +++++ + ++ Q +LYK +NPLAGC+P L IPV+ +Y+ +S + Sbjct: 635 NLQPQIKAIQQRYAGNQERI-QLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 693 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVG--------IWPI 495 + E + WI L PT I + +LPF + G +G + P+ Sbjct: 694 ANEGLLTEGFFWIPSLGG--PTTIAARQSGAGISWLLPF-VDGHPPLGWHDTICYLVLPV 750 Query: 496 IMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ S F+ M+ M PP P+ K ++L ++P + + S P+GL IYW +N++S Sbjct: 751 LLVASQFVSMEIMKPPQTDDPSQKNTLLVLKFLPFMIGWFSLSVPSGLSIYWFTNNILST 810 Query: 551 VQQAVIMKMHGAE 563 QQ + K+ GA+ Sbjct: 811 AQQVWLRKLGGAK 823 >gi|301335721|ref|ZP_07223965.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis L2tet1] Length = 785 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 91/282 (32%), Positives = 151/282 (53%), Gaps = 26/282 (9%) Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM--LID----WGWFYFIAKP----M 346 LP ++ ++AG PT+ ++ A + E ID G+F FI +P + Sbjct: 495 LPKEAGRYQFMVYAGPLADPTLKTLDRANANSKGETPEYIDAIAFRGFFSFITEPFAALL 554 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F L G++GI+I+L T+ +KLL +PL S M+ + P I E+++K+K+ Sbjct: 555 FVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKRE 614 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + Q ++ LYK + +NP+ GC P+L+QIP A++ ++ S +R A F GWI +L Sbjct: 615 PKRA-QMEIMALYKMNKVNPITGCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNL 673 Query: 466 AAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQA 517 A D LF P + G + PI++ + MF Q K+S P +D + Q Sbjct: 674 TAPD-----VLFSWETPIWFIG-KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQE 727 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + M ++F F +FP+GL IYW S ++ ++QQ V K+ Sbjct: 728 AMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQQWVTNKI 769 >gi|295402125|ref|ZP_06812084.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus thermoglucosidasius C56-YS93] gi|312112754|ref|YP_003991070.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y4.1MC1] gi|294975808|gb|EFG51427.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus thermoglucosidasius C56-YS93] gi|311217855|gb|ADP76459.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y4.1MC1] Length = 256 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 118/224 (52%), Gaps = 32/224 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L+ Y + G ++G++I++ T+F++LL PL +Q + M+ +QP+I Sbjct: 37 WNEYIVYPLSWLIKYVAGVFGGSYGLSIIVVTIFIRLLILPLMIQQTKNAKAMQALQPEI 96 Query: 397 DELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+ Y I + E+ Sbjct: 97 QKLREKYSSKDMQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPILIGFYHAIMRTKEI 156 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 F W DL D PFY I PI+ ++ FIQ K+ AD Sbjct: 157 AEHNFL-WF-DLGEKD-----------PFY--------ILPIVAGITTFIQQKIV--MAD 193 Query: 514 KGQ-----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 GQ M+L MP++ V +FPA L +YW N+ SI Q Sbjct: 194 TGQQNPQMVMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIAQ 237 >gi|258649215|ref|ZP_05736684.1| inner membrane protein OxaA [Prevotella tannerae ATCC 51259] gi|260850480|gb|EEX70349.1| inner membrane protein OxaA [Prevotella tannerae ATCC 51259] Length = 626 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 101/390 (25%), Positives = 175/390 (44%), Gaps = 67/390 (17%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF---KYLSD 280 G L EQK +++ E N W+ D+Y+++V I K SF + F S+ Sbjct: 229 GTDKLSEQKSDELKP-------EGNIDWIAFKDQYFSAVLIAGK-NSFTNTFLKSDTCSE 280 Query: 281 GHARYQAKFSANEITILP-GKSITTTNFLFAGAKEF--PTIHHYE---KDLAIPRFEMLI 334 G + + E+ P GK++T F F K + Y+ KDL + + L+ Sbjct: 281 GSGYVKDYIATAEVAFDPTGKNVTQVQFYFGPNKYLYLKGLEKYKLGNKDLDL---QDLV 337 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 GW F F + F L G N GI ++L T+ ++ + +P KK ++STA M+ Sbjct: 338 YLGWPLFRWINRFFTIYVFDFLSGFGLNMGIVLLLITLLMRAIVYPATKKSFLSTAKMRV 397 Query: 392 IQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++PK+DEL +K+ + Q+ +QLY + ++P+ GC P+ +Q+P++ A++ + + Sbjct: 398 LRPKVDELAKKYPNKEDAMKRQQETMQLYSQYGVSPMGGCLPMFIQMPIWIAMFNFVPNA 457 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI------- 503 E+R F W DL+ D I+ + P IW I LS+F Sbjct: 458 FELRQQAFL-WADDLSTYDD--------IISWNTP------IWGIGTHLSLFCVLFCCTN 502 Query: 504 ---------QMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISI 550 Q + S Q I+ W MP+ F F + + +GL Y+ +S+ Sbjct: 503 LLYSWLTMKQQQDSMSGEQAQQMKIMQWMTFLMPIFFFFMFNKYSSGLNYYY----FVSL 558 Query: 551 VQQAVIM---KMHGAEIGLIDRLRSTFSKN 577 + A+ M + + L+++L + F N Sbjct: 559 LTSALTMWYLRRSTDDKKLLEKLEANFRAN 588 >gi|218187535|gb|EEC69962.1| hypothetical protein OsI_00422 [Oryza sativa Indica Group] Length = 459 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 135/253 (53%), Gaps = 30/253 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ + +++ + + ++G AI+L TV VK PL K+Q ST M+ Sbjct: 108 GWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQ 167 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QP+I +++++ + ++ Q +LYK +NPLAGC+P L IPV+ +Y+ +S + Sbjct: 168 NLQPQIKAIQQRYAGNQERI-QLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 226 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVG--------IWPI 495 + E + WI L PT I + +LPF + G +G + P+ Sbjct: 227 ANEGLLTEGFFWIPSLGG--PTTIAARQSGAGISWLLPF-VDGHPPLGWHDTICYLVLPV 283 Query: 496 IMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ S F+ M+ M PP P+ K ++L ++P + + S P+GL IYW +N++S Sbjct: 284 LLVASQFVSMEIMKPPQTDDPSQKNTLLVLKFLPFMIGWFSLSVPSGLSIYWFTNNILST 343 Query: 551 VQQAVIMKMHGAE 563 QQ + K+ GA+ Sbjct: 344 AQQVWLRKLGGAK 356 >gi|315273159|ref|ZP_07869206.1| stage III sporulation protein J [Listeria marthii FSL S4-120] gi|313616210|gb|EFR89288.1| stage III sporulation protein J [Listeria marthii FSL S4-120] Length = 287 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 122/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L D P+Y I P++ +L+ F+ K M Sbjct: 162 KTDSFL-WMQ-LGNPD-----------PYY--------ILPVVAALTTFLSSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW NV ++ Q +I Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNVFTVFQTLLI 246 >gi|255317353|ref|ZP_05358599.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis 6276s] Length = 785 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 90/282 (31%), Positives = 151/282 (53%), Gaps = 26/282 (9%) Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLA-----IPRFEMLIDW-GWFYFIAKP----M 346 LP ++ ++AG PT+ ++ A P + I + G+F FI +P + Sbjct: 495 LPKEAGRYQFMVYAGPLADPTLKALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALL 554 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F L G++GI+I+L T+ +KLL +PL S M+ + P I E+++K+K+ Sbjct: 555 FVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKRE 614 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + Q ++ LYK + +NP+ GC P+L+QIP A++ ++ S +R A F GWI +L Sbjct: 615 PKRA-QMEIMALYKMNKVNPITGCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNL 673 Query: 466 AAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQA 517 A D LF P + G + PI++ + MF Q K+S P +D + Q Sbjct: 674 TAPD-----VLFSWETPIWFIG-KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQE 727 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + M ++F F +FP+GL IYW S ++ ++QQ V K+ Sbjct: 728 AMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQQWVTNKI 769 >gi|16804891|ref|NP_466376.1| hypothetical protein lmo2854 [Listeria monocytogenes EGD-e] gi|46909042|ref|YP_015431.1| SpoJ protein [Listeria monocytogenes serotype 4b str. F2365] gi|47097239|ref|ZP_00234801.1| spoJ protein [Listeria monocytogenes str. 1/2a F6854] gi|224498310|ref|ZP_03666659.1| SpoJ protein [Listeria monocytogenes Finland 1988] gi|224503080|ref|ZP_03671387.1| SpoJ protein [Listeria monocytogenes FSL R2-561] gi|226225403|ref|YP_002759510.1| SpoIIIJ protein [Listeria monocytogenes Clip81459] gi|254824783|ref|ZP_05229784.1| spoJ protein [Listeria monocytogenes FSL J1-194] gi|254827421|ref|ZP_05232108.1| spoJ protein [Listeria monocytogenes FSL N3-165] gi|254830711|ref|ZP_05235366.1| SpoIIIJ protein [Listeria monocytogenes 10403S] gi|254851844|ref|ZP_05241192.1| spoJ protein [Listeria monocytogenes FSL R2-503] gi|254899689|ref|ZP_05259613.1| SpoIIIJ protein [Listeria monocytogenes J0161] gi|254913108|ref|ZP_05263120.1| spoJ protein [Listeria monocytogenes J2818] gi|254930872|ref|ZP_05264231.1| spoJ protein [Listeria monocytogenes HPB2262] gi|254937489|ref|ZP_05269186.1| OxaA-like protein [Listeria monocytogenes F6900] gi|255520073|ref|ZP_05387310.1| SpoIIIJ protein [Listeria monocytogenes FSL J1-175] gi|284800259|ref|YP_003412124.1| hypothetical protein LM5578_0004 [Listeria monocytogenes 08-5578] gi|284993444|ref|YP_003415212.1| hypothetical protein LM5923_0004 [Listeria monocytogenes 08-5923] gi|300763388|ref|ZP_07073386.1| spoJ protein [Listeria monocytogenes FSL N1-017] gi|38503109|sp|Q8Y3I2|OXAA1_LISMO RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|67461022|sp|Q71VQ8|OXAA1_LISMF RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|16412354|emb|CAD01067.1| lmo2854 [Listeria monocytogenes EGD-e] gi|46882315|gb|AAT05608.1| spoJ protein [Listeria monocytogenes serotype 4b str. F2365] gi|47014394|gb|EAL05365.1| spoJ protein [Listeria monocytogenes str. 1/2a F6854] gi|225877865|emb|CAS06580.1| Putative SpoIIIJ protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258599799|gb|EEW13124.1| spoJ protein [Listeria monocytogenes FSL N3-165] gi|258605137|gb|EEW17745.1| spoJ protein [Listeria monocytogenes FSL R2-503] gi|258610091|gb|EEW22699.1| OxaA-like protein [Listeria monocytogenes F6900] gi|284055821|gb|ADB66762.1| hypothetical protein LM5578_0004 [Listeria monocytogenes 08-5578] gi|284058911|gb|ADB69850.1| hypothetical protein LM5923_0004 [Listeria monocytogenes 08-5923] gi|293582417|gb|EFF94449.1| spoJ protein [Listeria monocytogenes HPB2262] gi|293591110|gb|EFF99444.1| spoJ protein [Listeria monocytogenes J2818] gi|293594022|gb|EFG01783.1| spoJ protein [Listeria monocytogenes FSL J1-194] gi|300515665|gb|EFK42714.1| spoJ protein [Listeria monocytogenes FSL N1-017] gi|328468319|gb|EGF39325.1| hypothetical protein LM1816_03412 [Listeria monocytogenes 1816] gi|332313283|gb|EGJ26378.1| Membrane protein oxaA 1 [Listeria monocytogenes str. Scott A] Length = 287 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 122/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L D P+Y I P++ +L+ F+ K M Sbjct: 162 KTDSFL-WMQ-LGNPD-----------PYY--------ILPVVAALTTFLSSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLI 246 >gi|255311052|ref|ZP_05353622.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis 6276] Length = 787 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 90/282 (31%), Positives = 151/282 (53%), Gaps = 26/282 (9%) Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLA-----IPRFEMLIDW-GWFYFIAKP----M 346 LP ++ ++AG PT+ ++ A P + I + G+F FI +P + Sbjct: 497 LPKEAGRYQFMVYAGPLADPTLKALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALL 556 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F L G++GI+I+L T+ +KLL +PL S M+ + P I E+++K+K+ Sbjct: 557 FVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKRE 616 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + Q ++ LYK + +NP+ GC P+L+QIP A++ ++ S +R A F GWI +L Sbjct: 617 PKRA-QMEIMALYKMNKVNPITGCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNL 675 Query: 466 AAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQA 517 A D LF P + G + PI++ + MF Q K+S P +D + Q Sbjct: 676 TAPD-----VLFSWETPIWFIG-KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQE 729 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + M ++F F +FP+GL IYW S ++ ++QQ V K+ Sbjct: 730 AMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQQWVTNKI 771 >gi|224054791|ref|XP_002298365.1| inner membrane protein [Populus trichocarpa] gi|222845623|gb|EEE83170.1| inner membrane protein [Populus trichocarpa] Length = 451 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 77/252 (30%), Positives = 130/252 (51%), Gaps = 28/252 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M ++ + + + +G AI+L T+ VK+ PL KKQ ST M+ Sbjct: 97 GWFGFISDGMEFVLKVLKDGLSSVHVPYAYGFAIILLTIAVKVATLPLTKKQVESTLAMQ 156 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QPKI +++++ + ++ Q +LY+ +NPLAGC+P L IPV+ +Y+ +S + Sbjct: 157 NLQPKIKAIQQRYAGNQERI-QLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNV 215 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT---------LFGILPFYLPGFMHVG----IWPII 496 + E + WI L PT I LF + + P H + P++ Sbjct: 216 ANEGVLTEGFFWIPSLGG--PTTIAARQSGSGISWLFPFVDGHPPLGWHDTAAYLVLPVL 273 Query: 497 MSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + S ++ M+ M PP P K ++ ++P++ + S P+GL IYW +NV+S Sbjct: 274 LIASQYVSMEIMKPPQTDDPTQKNTLLVFKFLPIMIGYFSLSVPSGLSIYWFTNNVLSTA 333 Query: 552 QQAVIMKMHGAE 563 QQ + K+ GA+ Sbjct: 334 QQVWLRKLGGAK 345 >gi|313625809|gb|EFR95423.1| stage III sporulation protein J [Listeria innocua FSL J1-023] Length = 287 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 121/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++++F +L G N+ + I++ T+ ++LL PL KQ S M ++QPKI Sbjct: 42 WSHYIVFPLSWVITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L DP I P++ +L+ F+ K M Sbjct: 162 KTDTFL-WMQ-LGNPDPYFIL-------------------PVVAALTTFLSSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLI 246 >gi|76788973|ref|YP_328059.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis A/HAR-13] gi|237802674|ref|YP_002887868.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis B/Jali20/OT] gi|76167503|gb|AAX50511.1| 60 kDa inner membrane protein [Chlamydia trachomatis A/HAR-13] gi|231273908|emb|CAX10700.1| inner membrane protein [Chlamydia trachomatis B/Jali20/OT] gi|296437627|gb|ADH19788.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis G/11074] Length = 787 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 90/282 (31%), Positives = 151/282 (53%), Gaps = 26/282 (9%) Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLA-----IPRFEMLIDW-GWFYFIAKP----M 346 LP ++ ++AG PT+ ++ A P + I + G+F FI +P + Sbjct: 497 LPKEAGRYQFMVYAGPLADPTLKALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALL 556 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F L G++GI+I+L T+ +KLL +PL S M+ + P I E+++K+K+ Sbjct: 557 FVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKRE 616 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + Q ++ LYK + +NP+ GC P+L+QIP A++ ++ S +R A F GWI +L Sbjct: 617 PKRA-QMEIMALYKMNKVNPITGCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNL 675 Query: 466 AAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQA 517 A D LF P + G + PI++ + MF Q K+S P +D + Q Sbjct: 676 TAPD-----VLFSWETPIWFIG-KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQE 729 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + M ++F F +FP+GL IYW S ++ ++QQ V K+ Sbjct: 730 AMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQQWVTNKI 771 >gi|15604972|ref|NP_219756.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis D/UW-3/CX] gi|38502864|sp|O84253|OXAA_CHLTR RecName: Full=Inner membrane protein oxaA gi|3328662|gb|AAC67844.1| 60kDa Inner Membrane Protein [Chlamydia trachomatis D/UW-3/CX] gi|297748381|gb|ADI50927.1| 60 kDa inner membrane protein YIDC [Chlamydia trachomatis D-EC] gi|297749261|gb|ADI51939.1| 60 kDa inner membrane protein YIDC [Chlamydia trachomatis D-LC] Length = 787 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 90/282 (31%), Positives = 151/282 (53%), Gaps = 26/282 (9%) Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLA-----IPRFEMLIDW-GWFYFIAKP----M 346 LP ++ ++AG PT+ ++ A P + I + G+F FI +P + Sbjct: 497 LPKEAGRYQFMVYAGPLADPTLKALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALL 556 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F L G++GI+I+L T+ +KLL +PL S M+ + P I E+++K+K+ Sbjct: 557 FVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKRE 616 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + Q ++ LYK + +NP+ GC P+L+QIP A++ ++ S +R A F GWI +L Sbjct: 617 PKRA-QMEIMALYKMNKVNPITGCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNL 675 Query: 466 AAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQA 517 A D LF P + G + PI++ + MF Q K+S P +D + Q Sbjct: 676 TAPD-----VLFSWETPIWFIG-KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQE 729 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + M ++F F +FP+GL IYW S ++ ++QQ V K+ Sbjct: 730 AMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQQWVTNKI 771 >gi|296435767|gb|ADH17941.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis G/9768] gi|296436691|gb|ADH18861.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis G/11222] gi|297140126|gb|ADH96884.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis G/9301] Length = 785 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 90/282 (31%), Positives = 151/282 (53%), Gaps = 26/282 (9%) Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLA-----IPRFEMLIDW-GWFYFIAKP----M 346 LP ++ ++AG PT+ ++ A P + I + G+F FI +P + Sbjct: 495 LPKEAGRYQFMVYAGPLADPTLKALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALL 554 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F L G++GI+I+L T+ +KLL +PL S M+ + P I E+++K+K+ Sbjct: 555 FVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKRE 614 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + Q ++ LYK + +NP+ GC P+L+QIP A++ ++ S +R A F GWI +L Sbjct: 615 PKRA-QMEIMALYKMNKVNPITGCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNL 673 Query: 466 AAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQA 517 A D LF P + G + PI++ + MF Q K+S P +D + Q Sbjct: 674 TAPD-----VLFSWETPIWFIG-KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQE 727 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + M ++F F +FP+GL IYW S ++ ++QQ V K+ Sbjct: 728 AMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQQWVTNKI 769 >gi|255025588|ref|ZP_05297574.1| SpoIIIJ protein [Listeria monocytogenes FSL J2-003] Length = 283 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 122/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L D P+Y I P++ +L+ F+ K M Sbjct: 162 KTDSFL-WMQ-LGNPD-----------PYY--------ILPVVAALTTFLSSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLI 246 >gi|116874193|ref|YP_850974.1| SpoJ protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116743071|emb|CAK22195.1| SpoJ protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 287 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 122/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ L+++F +L G N+ + I++ T+ ++LL PL KQ S M ++QPKI Sbjct: 42 WSHYIVFPLSWLITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQVKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L D P+Y I PI+ +L+ F+ K M Sbjct: 162 KTDTFL-WMQ-LGNPD-----------PYY--------ILPIVAALTTFLSSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW NV ++ Q +I Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNVFTVFQTLLI 246 >gi|254495503|ref|ZP_05108427.1| 60Kd inner membrane protein [Polaribacter sp. MED152] gi|85819859|gb|EAQ41016.1| 60Kd inner membrane protein [Polaribacter sp. MED152] Length = 625 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 134/243 (55%), Gaps = 30/243 (12%) Query: 334 IDWGWFYFIAK----PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + WG F F+ + P+F L+ F + N+G+ I+L T+ V++L PL K Y+S+A M Sbjct: 344 LGWGIFGFLNRNVFYPVFNLLEGF---LTNYGLIIILMTIVVRILMSPLVYKSYLSSAKM 400 Query: 390 KNIQPKIDELREKF--KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 K I+P++ EL +K+ K++ + Q+ M + + +N ++GC P LLQ+P+FFA++K Sbjct: 401 KVIRPELQELNKKYPGKENAMKRQQETM-AIQRKAGVNMMSGCIPALLQMPIFFALFKFF 459 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++ +R F W DL++ D IF L +PFY HV ++PI+ S+++F M+M Sbjct: 460 PTNIALRQESFL-WAPDLSSYDV--IFNLPFEIPFYGD---HVSLFPILASIAIFFYMRM 513 Query: 508 SP--------------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + P K ++ + P++ + + + +GL +Y+ SN+++I Sbjct: 514 NQSQQANMQAPTQEGMPDMSKMMKYMIYFSPIMMLIFFNRYASGLSLYYFISNLLTISIM 573 Query: 554 AVI 556 VI Sbjct: 574 LVI 576 >gi|217965938|ref|YP_002351616.1| membrane protein OxaA 1 [Listeria monocytogenes HCC23] gi|290892034|ref|ZP_06555031.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|217335208|gb|ACK41002.1| membrane protein OxaA 1 [Listeria monocytogenes HCC23] gi|290558628|gb|EFD92145.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|307572445|emb|CAR85624.1| membrane protein oxaA 1 precursor [Listeria monocytogenes L99] Length = 287 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 122/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L D P+Y I P++ +L+ F+ K M Sbjct: 162 KTDSFL-WMQ-LGNPD-----------PYY--------ILPVVAALTTFLSSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLI 246 >gi|65317011|ref|ZP_00389970.1| COG0706: Preprotein translocase subunit YidC [Bacillus anthracis str. A2012] Length = 262 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 126/235 (53%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G + GIAI++ T+ ++ PLA QY S A MK +QP++ + Sbjct: 42 YFVYPISFMIQFVAHHIPGASXGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQK 101 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++ + + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + E+ Sbjct: 102 LKQXYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F W+ +L ADP +I PII +L+ FIQMK+ + Sbjct: 162 RTSTFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNST 200 Query: 514 KG-QAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 G Q +L MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 201 SGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 255 >gi|313611878|gb|EFR86333.1| stage III sporulation protein J [Listeria monocytogenes FSL F2-208] Length = 277 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 122/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 32 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 91 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 92 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 151 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L D P+Y I P++ +L+ F+ K M Sbjct: 152 KTDSFL-WMQ-LGNPD-----------PYY--------ILPVVAALTTFLSSKISMMGQT 190 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 191 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLI 236 >gi|78043134|ref|YP_358876.1| sporulation associated-membrane protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995249|gb|ABB14148.1| sporulation associated-membrane protein [Carboxydothermus hydrogenoformans Z-2901] Length = 223 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 64/200 (32%), Positives = 115/200 (57%), Gaps = 24/200 (12%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + ++ +AI++ T+ +K++ +PL Q S M+ +QPK+ E+++K+K P Q Q+A++ Sbjct: 24 IPSYALAIIMLTILIKIILYPLNHAQMKSMKVMQELQPKMQEIQKKYKNDP-QKQQQALM 82 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--ISLEMRHAPFWGWIKDLAAADPTNIF 474 +LYK + +NP++GC P+L+Q+P+ A+Y+ + L HA F+ WI +++ DP I Sbjct: 83 ELYKEYGVNPMSGCLPMLIQLPILIALYRALYNFKYLNPAHAKFF-WIANISHKDPYFIL 141 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSS 533 PI+ +L+ +IQ +M+ D Q ++L MP++ + S Sbjct: 142 -------------------PILAALTTYIQSRMTMTSGNDPNQKVMLYVMPLMIGWIAMS 182 Query: 534 FPAGLIIYWSWSNVISIVQQ 553 PAGL IYW N++ I+QQ Sbjct: 183 LPAGLGIYWVVLNIMGIIQQ 202 >gi|255532481|ref|YP_003092853.1| 60 kDa inner membrane insertion protein [Pedobacter heparinus DSM 2366] gi|255345465|gb|ACU04791.1| 60 kDa inner membrane insertion protein [Pedobacter heparinus DSM 2366] Length = 600 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 78/258 (30%), Positives = 133/258 (51%), Gaps = 24/258 (9%) Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWF------YFIAKPMFMLMSYFYNLVGNFGIAI 364 G +F T+ +L E +D G++ FI P+F + F N+G+ I Sbjct: 310 GTNKFDTLKAQGYEL-----EKQVDMGYWPLKYINRFIVLPVFKFLESFN---WNYGVII 361 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 +L T+ +K+ PL K Y+S A M+ ++P++D ++ K P +LQ+ ++LYK + Sbjct: 362 LLLTIALKVAMSPLTYKSYLSMAKMRILKPEMDVIKAKVGDDNPTLLQQEYLKLYKQVGV 421 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI-LPFY 483 NPL GC P+LLQ+P A + E+R F W+KDL+ D F FG +PF Sbjct: 422 NPLGGCLPMLLQLPFVMAFFFFFPNLFELRGETFL-WMKDLSTYDD---FIKFGFTIPFI 477 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPP-PADKGQAMILNW-MPVVFVFALSSFPAGLIIY 541 H+ + ++M++S I + GQ + + MP++F+ L+S+P+GL Y Sbjct: 478 GD---HLSLMCVLMTISTLIYTYFNNQISGATGQMKYIGYIMPIIFLGVLNSYPSGLNYY 534 Query: 542 WSWSNVISIVQQAVIMKM 559 + +N+++ QQ +I M Sbjct: 535 YFLANMLTFAQQFLIKSM 552 >gi|260890876|ref|ZP_05902139.1| stage III sporulation protein J [Leptotrichia hofstadii F0254] gi|260859429|gb|EEX73929.1| stage III sporulation protein J [Leptotrichia hofstadii F0254] Length = 228 Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 121/217 (55%), Gaps = 23/217 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +++ Y +VGN+G+AI++ T+ ++++ FPLA KQ + MK +QP++++++EK+K + P Sbjct: 14 VLNAIYGVVGNYGVAIIIVTILMRIIVFPLALKQEKAMKKMKELQPELEKIKEKYKDN-P 72 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAA 467 Q Q+ +LY+ NPLAGC P+L+Q+PVF A+Y S + A F W +K Sbjct: 73 QEYQRKTAELYRESGANPLAGCLPLLIQMPVFVALYWAFSGNAIPADAKFLWFTLK---- 128 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MILN 521 P +FT+ G + PI+ + +IQ K+ A KGQ +L Sbjct: 129 -QPDRLFTI---------GKFAFNLLPILNVVITYIQQKIM-TDATKGQEGSQQMQTMLY 177 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MP + + + P+G+ +Y+ S S+VQQ +I+K Sbjct: 178 MMPALMLVIFYNMPSGVTLYYLVSGAWSVVQQYIILK 214 >gi|269122721|ref|YP_003310898.1| hypothetical protein Sterm_4135 [Sebaldella termitidis ATCC 33386] gi|268616599|gb|ACZ10967.1| 60 kDa inner membrane insertion protein [Sebaldella termitidis ATCC 33386] Length = 219 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 119/204 (58%), Gaps = 12/204 (5%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+GI I+L TV ++++ PL KQ S M++IQP++D+LREK+K + PQ +Q M + Sbjct: 22 GNYGIGIILLTVLIRVIILPLTIKQEKSMKKMRDIQPEVDKLREKYKDN-PQEMQIKMQE 80 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 +YK + +NP+AGC P+ +Q+ +F +++V++ + + + + W +L D Sbjct: 81 IYKKNQVNPMAGCLPLFVQMCIFITLFRVLNDANSIPNDATFLWF-NLKQPDALVKLPFT 139 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPADKGQAM--ILNWMPVVFVFALSSF 534 G+ F + I+P++ ++ F Q K MS D M +L +P+V + + Sbjct: 140 GM-------FSAINIFPLLNTVVTFFQQKMMSTGTQDSNPQMKTMLYTLPLVILVMTYNM 192 Query: 535 PAGLIIYWSWSNVISIVQQAVIMK 558 P+G+ +YW S++++++QQ IMK Sbjct: 193 PSGVSLYWFTSSLLAVIQQFFIMK 216 >gi|229163993|ref|ZP_04291932.1| Membrane protein oxaA 2 [Bacillus cereus R309803] gi|228619495|gb|EEK76382.1| Membrane protein oxaA 2 [Bacillus cereus R309803] Length = 260 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 125/235 (53%), Gaps = 32/235 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ +M+ +++ G +FGIAI++ T+ V+ PLA QY S MK +QP++ + Sbjct: 40 YFVYPISYMIQFVAHHIPGASFGIAIIVITLVVRSAMIPLAVSQYRSQMKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + QK M +L ++ NPLAGCWPI +Q+P+F A+Y IS + E+ Sbjct: 100 LKKKYGDVSKDLEKQKQYQKEMSELMRSGGWNPLAGCWPIFIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F W+ +L ADP +I PII +L+ FIQMK+ Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PIIAALTTFIQMKVFQSNMA 198 Query: 514 KG-QAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 G Q+ +L MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 199 SGEQSQMLKVQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|253582576|ref|ZP_04859797.1| inner membrane protein oxaA [Fusobacterium varium ATCC 27725] gi|251835446|gb|EES63986.1| inner membrane protein oxaA [Fusobacterium varium ATCC 27725] Length = 205 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 117/210 (55%), Gaps = 22/210 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ + +NL GNFG+AI+ T+ +K++ PL KQ S +MK +QP++D+++E++K Sbjct: 15 MLVFMHNLTGNFGLAIIGVTILMKIILLPLTLKQDKSMKSMKKLQPELDKIKEQYKGDSK 74 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + QK M +LY+ H +NP GC P+L+Q+P+ +A++ V+ + + + F W++ L Sbjct: 75 MLNQKTM-ELYQKHKVNPAGGCLPLLVQLPILWALFGVLRGGIVPQDSTFL-WMQ-LVQP 131 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 D P+Y I P++ + F+Q K+ + ++ P++ V Sbjct: 132 D-----------PYY--------ILPVLNGVVSFVQQKVMGSSDNPQMKNMMYMFPIMMV 172 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F PAGL IYW S++ ++QQ +IMK Sbjct: 173 FISYKMPAGLQIYWLTSSLAGVIQQYLIMK 202 >gi|332296665|ref|YP_004438588.1| membrane protein insertase, YidC/Oxa1 family [Thermodesulfobium narugense DSM 14796] gi|332179768|gb|AEE15457.1| membrane protein insertase, YidC/Oxa1 family [Thermodesulfobium narugense DSM 14796] Length = 214 Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 118/218 (54%), Gaps = 29/218 (13%) Query: 353 FYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 FY+L+ +FG+ I+L T+ ++ L +PL M+ +QPKI EL+EK+K S PQ Sbjct: 17 FYSLLSFLHDFGLVIILITLLIRALLWPLNHISLDQMKKMQKLQPKIKELQEKYK-SDPQ 75 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY------KVISISLEMRHAPFWGWIK 463 LQ M+ YK + INP GC P+L+Q+P+ A Y ++ SI + A + WI Sbjct: 76 RLQTEMVAFYKNNKINPFGGCLPMLIQLPILIAFYYFLLSPELKSIIEQTHSAVNFLWIN 135 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 D+ DP FY I P ++ ++ +IQ K++ AD+ Q +L M Sbjct: 136 DITEKDP-----------FY--------ILPALLMITTYIQQKITTNTADRMQRQMLLIM 176 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P+ F FPAG++IYW+ SN+I I+Q ++M+ H Sbjct: 177 PLFLGFISIQFPAGILIYWNVSNIIGIIQSFIVMRKHA 214 >gi|86132804|ref|ZP_01051396.1| 60 KD inner membrane protein [Dokdonia donghaensis MED134] gi|85816758|gb|EAQ37944.1| 60 KD inner membrane protein [Dokdonia donghaensis MED134] Length = 628 Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 162/330 (49%), Gaps = 40/330 (12%) Query: 246 HESNSWLGISDKYWASVFI---PSKETSFHSQFKYLS----DGHARYQAKFSANEITILP 298 E W+ +++S+ I P KE S+ Y D + ++ ++ + Sbjct: 262 EEDLVWMNYRQHFFSSMLISETPFKEARLTSKDLYKEADDRDEETIFTKQYGSDVLLEAK 321 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEK--DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 + ++ G ++ + Y++ D A+P + WG F F+ K ++++ +F L Sbjct: 322 NGELDYAMQMYYGPTDYTILKSYDQGLDEAMP-----LGWGIFGFLNK--YLVIPFFGFL 374 Query: 357 VGNF--GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 G GIAI++ T+ +KL P+ KQY S A MK ++P+I + EK+K + + Q+ Sbjct: 375 SGFLPAGIAIIVMTIVIKLFLSPVQYKQYTSQAKMKILKPEIAAISEKYKDNAMKKQQET 434 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M LY +P AGC P LLQIPVF+A++ + ++R F W DL++ D Sbjct: 435 M-ALYSKAGASPAAGCLPALLQIPVFYALFTFFPSAFDLRGKSFL-WADDLSSYDE---- 488 Query: 475 TLFGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSP------PPADKG-------QAMIL 520 LPF +P + HV ++PI+ ++++F M+++ P +G ++ Sbjct: 489 --IAKLPFEIPFYGDHVSLFPILAAVTIFFSMRLTTGNQQMQQPTQEGMPDMSKMMKYMM 546 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 + P++ + + + +GL +Y+ SN+++I Sbjct: 547 YFSPLLMLVFFNQYASGLSLYYFISNLLTI 576 >gi|213400721|gb|ACJ47009.1| hypothetical protein [Wolbachia endosymbiont of Litomosoides sigmodontis] Length = 171 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/168 (36%), Positives = 94/168 (55%), Gaps = 4/168 (2%) Query: 222 AVLG--DKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 VLG D L E Y +I K I +W G +DKYW + IP + + K+ Sbjct: 3 GVLGAFDNKLEEWTYKNIAKKHLIKTSTSKKNWFGFADKYWLTAIIPEESDKTNVSIKHT 62 Query: 279 S-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 S +G ++Q F+ IL G S + N+ FAGAK+ + +Y+ L IP F+ +D+G Sbjct: 63 SANGIDKFQVDFAKPRKNILSGTSASNVNYFFAGAKKLNLLDYYKSILNIPLFDKAVDFG 122 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 YFI KP+F+L+ YF ++ NFG+AI+L T+ +KL PL+ K ++S Sbjct: 123 VLYFITKPVFLLLEYFNFVLRNFGLAILLLTLVIKLFMLPLSNKSHIS 170 >gi|254991919|ref|ZP_05274109.1| SpoIIIJ protein [Listeria monocytogenes FSL J2-064] Length = 287 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 120/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++ +F L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVYPLSAVIKWFSELFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + + Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAAI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L D P+Y I P++ +L+ F+ K M Sbjct: 162 KGDTFL-WMQ-LGNPD-----------PYY--------ILPVVAALTTFLSSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLI 246 >gi|228993751|ref|ZP_04153656.1| Membrane protein oxaA 2 [Bacillus pseudomycoides DSM 12442] gi|228765962|gb|EEM14611.1| Membrane protein oxaA 2 [Bacillus pseudomycoides DSM 12442] Length = 260 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 130/240 (54%), Gaps = 33/240 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ +++ + + V G+FGIAI++ T+ ++ PLA QY S MK +QP+ Sbjct: 37 WDHYFVYPISLMLQFVAHHVPGGSFGIAIIIITLVIRSAMIPLAVSQYRSQMKMKKMQPQ 96 Query: 396 IDELREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 I +L+EK + QK M +L KT NPLAGC P+L+Q+P+F A+Y IS + Sbjct: 97 IQKLKEKHGNVSKDIEKQKQYQKEMSELMKTGGWNPLAGCLPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + F W+ +L ADP +I PI+ +L+ FIQMK+ Sbjct: 157 EEIRTSSFL-WV-NLGHADPYHIL-------------------PILAALATFIQMKVMQS 195 Query: 508 SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + P ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E G Sbjct: 196 NVTPGEQVQMLKVQQFMMPAMILFMGFAAPSGLVLYWITGNIFTMLQTIVLRKVMDREEG 255 >gi|115434560|ref|NP_001042038.1| Os01g0151200 [Oryza sativa Japonica Group] gi|54290223|dbj|BAD61111.1| putative PPF-1 protein [Oryza sativa Japonica Group] gi|113531569|dbj|BAF03952.1| Os01g0151200 [Oryza sativa Japonica Group] Length = 459 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 135/253 (53%), Gaps = 30/253 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ + +++ + + ++G AI+L TV VK PL K+Q ST M+ Sbjct: 108 GWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQ 167 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QP+I +++++ + ++ Q +LYK +NPLAGC+P L IPV+ +Y+ +S + Sbjct: 168 NLQPQIKAIQQRYAGNQERI-QLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 226 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVG--------IWPI 495 + E + WI L PT I + +LPF + G +G + P+ Sbjct: 227 ANEGLLTEGFFWIPSLGG--PTTIAARQSGAGISWLLPF-VDGHPPLGWHDTICYLVLPV 283 Query: 496 IMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ S F+ M+ M PP P+ K ++L ++P + + S P+GL IYW +N++S Sbjct: 284 LLVASQFVSMEIMKPPQTDDPSQKNTLLVLKFLPFMIGWFSLSVPSGLSIYWFTNNILST 343 Query: 551 VQQAVIMKMHGAE 563 QQ + K+ GA+ Sbjct: 344 AQQVWLRKLGGAK 356 >gi|237752891|ref|ZP_04583371.1| inner membrane protein oxaA [Helicobacter winghamensis ATCC BAA-430] gi|229375158|gb|EEO25249.1| inner membrane protein oxaA [Helicobacter winghamensis ATCC BAA-430] Length = 418 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 19/191 (9%) Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 L D+Y+ ++F K F++ LS+ + N +L G + G Sbjct: 247 LAAVDRYYTTLFFNDK--GFNATI--LSNANEDPMPFIGGNGELVLEG---------YIG 293 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 K + + + P ++++G F AKP+F+L+ Y+ GN+G AI+L T+ V Sbjct: 294 PKNYRLLESID-----PFLTDVVEYGVITFFAKPLFLLLEKLYDFCGNWGWAIILLTLIV 348 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 +++ +PL K VS +K + PK+ EL++K+K PQ LQ M+ LYK H NP+ GC Sbjct: 349 RIVLYPLTYKGMVSMQKLKELAPKMKELQQKYK-GEPQKLQVHMMDLYKKHGANPMGGCL 407 Query: 432 PILLQIPVFFA 442 P+LLQIPVFFA Sbjct: 408 PLLLQIPVFFA 418 >gi|313635501|gb|EFS01736.1| stage III sporulation protein J [Listeria seeligeri FSL N1-067] Length = 287 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 120/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++++F +L G ++ I I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWVITWFSDLFGGSYAIGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L + DP I PI+ +L+ F K M Sbjct: 162 KTDTFL-WMQ-LGSPDPYFIL-------------------PIVAALTTFASSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLI 246 >gi|313157184|gb|EFR56614.1| membrane protein insertase, YidC/Oxa1 family [Alistipes sp. HGB5] Length = 656 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 105/353 (29%), Positives = 182/353 (51%), Gaps = 32/353 (9%) Query: 225 GDKSLVEQKYSDIEKS-SISNFHESNSWLGISDKYWASVFI-PSKETSFHSQFKYLSDGH 282 G+ S+ E SD KS S+S + +W+ ++++SVFI P +S + F + G Sbjct: 273 GESSIEELGMSDGAKSKSVST---AVNWVAFKQQFFSSVFIAPQNVSSANMAFDTAAPGS 329 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFA-GAKEFPTIHHY-EKDLAIPRFEMLIDWGWFY 340 ++ FS ++ + + +F F G ++ + + + A E LI GW Sbjct: 330 ELLKS-FSV-QMAVPYSAQVEGYDFAFYFGPNKYAILKKVTDNNGADLHMERLIPLGWGI 387 Query: 341 F------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 F P+F + N +G+FGI I++ + VKL+ PL K YVS A M+ I+P Sbjct: 388 FGWVNRWCVIPVF---DFLRNYIGSFGIIILILVILVKLVISPLTYKSYVSMAKMRLIKP 444 Query: 395 KIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 ++DEL +K+ K+ Q+A ++LYK INP+ GC P+L+Q+P+ A+++ S+E+ Sbjct: 445 QVDELNKKYPKKEDAMKKQQATMELYKKAGINPMGGCIPMLIQLPILIAMFRFFPASIEL 504 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF------IQMKM 507 R PF W DL++ D +I L +PFY HV ++ ++M++S+F Q Sbjct: 505 REQPFL-WADDLSSYD--SIVNLPFSIPFYGD---HVSLFALLMAVSLFGYSYFNYQQTA 558 Query: 508 SPPPADKGQAMILNWMPVVFVFA-LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 S P G ++ +M + + +S+ +GL Y+ SN+ +I Q VI ++ Sbjct: 559 SSQPQMAGMKFMMVYMMPIMMLLWFNSYSSGLCYYYLLSNLFTIGQTLVIRRI 611 >gi|217966559|ref|YP_002352065.1| hypothetical protein [Dictyoglomus turgidum DSM 6724] gi|217335658|gb|ACK41451.1| 60 kDa inner membrane insertion protein [Dictyoglomus turgidum DSM 6724] Length = 209 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 27/217 (12%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ FY L GN+G+AI+ + V+++ +PL Q S + IQP+I +++EKFK P Sbjct: 12 ILELFYKLTGNYGLAIIFLVILVRIILYPLTHAQLKSLFMQQKIQPEIKKIQEKFKDD-P 70 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA--PFWGWIKDLA 466 Q + K ++ LY+ + INP+ GC P+L+Q P+ A+Y+++ L ++A P + WI DL Sbjct: 71 QEMNKQIMLLYQQYKINPMMGCLPLLIQFPILIALYQLL---LHYKYAVTPQFLWISDL- 126 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 P I + + Y G LS +S P K Q I+N + Sbjct: 127 -TKPDYILLIIMAIVTYFSG-----------ELS-----SLSAAPEQKNQQRIMNIFTTL 169 Query: 527 F---VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +F L PAG+++YW S++ ++QQ V+ ++H Sbjct: 170 LFTGMFLLYKVPAGVMLYWLVSSLFQLLQQVVVFRLH 206 >gi|313640128|gb|EFS04745.1| stage III sporulation protein J [Listeria seeligeri FSL S4-171] Length = 287 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 120/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++++F +L G ++ I I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWVITWFSDLFGGSYAIGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L + DP I PI+ +L+ F K M Sbjct: 162 KTDTFL-WMQ-LGSPDPYFIL-------------------PIVAALTTFASSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLI 246 >gi|218262804|ref|ZP_03477162.1| hypothetical protein PRABACTJOHN_02842 [Parabacteroides johnsonii DSM 18315] gi|218223099|gb|EEC95749.1| hypothetical protein PRABACTJOHN_02842 [Parabacteroides johnsonii DSM 18315] Length = 559 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 25/285 (8%) Query: 251 WLGISDKYWASVFIPSKE----TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTN 306 W+ D Y++S+ I E T+ S+ DG + K + + L G T Sbjct: 266 WVAYKDMYFSSILIAGNEGFESTTIDSKM-LPEDGSFLKEYKTTTSVPFDLKGNEATDMR 324 Query: 307 FLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWF-------YFIAKPMFMLMSYFYNL 356 F F G +F + Y+ D+ E ++ GW YF+ P+F + F Sbjct: 325 FYF-GPNQFSLLKSYDDDVEKADQLDLEKIVPLGWGIFRWVNQYFVI-PLFNFLGQF--- 379 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAM 415 + ++G+ I L TV VKL+ FPL K Y+S+A M+ ++P+++EL K+ Q Q+A Sbjct: 380 IHSYGLLIFLLTVIVKLILFPLTYKSYMSSAKMRVLRPQVEELNAKYPGQDKAVERQRAT 439 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LY +P+AGC P+LLQ+P+ A++ ++E+RH F W DL+ D I + Sbjct: 440 MELYSRAGASPMAGCVPMLLQMPILVALFMFFPSAIELRHQSFL-WAHDLSTYDA--IVS 496 Query: 476 LFGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 +P P F H+ ++ ++M+++ I K + + GQ + Sbjct: 497 WNTYIPIITPYFGNHISLFCLLMTVTNIIYTKFNMEQTNTGQQQM 541 >gi|255503150|ref|ZP_05381540.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis 70s] gi|289525290|emb|CBJ14766.1| inner membrane protein [Chlamydia trachomatis Sweden2] gi|296438559|gb|ADH20712.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis E/11023] Length = 787 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 90/282 (31%), Positives = 150/282 (53%), Gaps = 26/282 (9%) Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLA-----IPRFEMLIDW-GWFYFIAKP----M 346 LP ++ ++AG PT+ ++ A P + I + G+F FI +P + Sbjct: 497 LPKEAGRYQFMVYAGPLADPTLKALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALL 556 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F L G++GI+I+L T+ +KLL +PL S M+ + P I E+++K K+ Sbjct: 557 FVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKHKRE 616 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + Q ++ LYK + +NP+ GC P+L+QIP A++ ++ S +R A F GWI +L Sbjct: 617 PKRA-QMEIMALYKMNKVNPITGCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNL 675 Query: 466 AAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQA 517 A D LF P + G + PI++ + MF Q K+S P +D + Q Sbjct: 676 TAPD-----VLFSWETPIWFIG-KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQE 729 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + M ++F F +FP+GL IYW S ++ ++QQ V K+ Sbjct: 730 AMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQQWVTNKI 771 >gi|326800909|ref|YP_004318728.1| membrane protein oxaA [Sphingobacterium sp. 21] gi|326551673|gb|ADZ80058.1| Membrane protein oxaA [Sphingobacterium sp. 21] Length = 609 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 91/318 (28%), Positives = 153/318 (48%), Gaps = 28/318 (8%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK-FSANEITILPGKSITT--TN 306 W+ Y+++V I + SF+ +S ++ K F+AN + + T + Sbjct: 262 DWISFKQHYFSNVLIA--KNSFNGGTLKVSTVNSDEIVKSFAANMSLDFNRQDVNTYPMS 319 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF------YFIAKPMFMLMSYFYNLVGNF 360 F F G +F + DL E I+ GW FI P+F L+ F N+ Sbjct: 320 FYF-GPNKFSILKDQGHDL-----EKQINMGWGPMKWINRFITLPVFNLLEGFN---WNY 370 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+ I + TV +K++ PL K YVS A M+ ++P++DE++ K + +LQ+ ++LYK Sbjct: 371 GLIIFVLTVLLKIVLSPLTYKSYVSMAKMRVLKPEMDEIKAKVGEDNQTLLQQEYLKLYK 430 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP+ GC P+LLQ+P A + E+R F W+KDL+ D F + I+ Sbjct: 431 QAGVNPMGGCIPMLLQMPFMIAFFFFFPNLFELRGESFL-WMKDLSTYDSIVNFPMIPII 489 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQM-KMSPPPADKGQAMILNW-MPVVFVFALSSFPAGL 538 H+ + I+M+ + + + GQ + + MP++F F L+S+PAGL Sbjct: 490 -----NINHISLMCILMTCATLLSTWYNNMVSGATGQMKYIGYFMPLIFFFVLNSYPAGL 544 Query: 539 IIYWSWSNVISIVQQAVI 556 Y+ S ++ V Q I Sbjct: 545 NYYYFLSTCLTFVIQFFI 562 >gi|255659825|ref|ZP_05405234.1| stage III sporulation protein J [Mitsuokella multacida DSM 20544] gi|260847900|gb|EEX67907.1| stage III sporulation protein J [Mitsuokella multacida DSM 20544] Length = 222 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 112/198 (56%), Gaps = 21/198 (10%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +G++G+AI+L T+ +K++ +PL KQ S M+ + PK+ +++EK+K + PQV+Q+ + Sbjct: 31 IGSYGVAIILLTILIKMMLYPLTVKQVKSMKAMQELSPKMKKIQEKYKDN-PQVMQQKVG 89 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPFWGWIKDLAAADPTNIFT 475 LYK +NPLAGC P+L+Q+P+ +Y + + + + + W+ +++ DP I Sbjct: 90 ALYKEAGVNPLAGCLPLLIQMPILMGMYYALYNFTYPTPESAAFLWLPNMSDPDPYYIL- 148 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 P++ +L+ F+Q K + ++ +++ MP+ + +FP Sbjct: 149 ------------------PVLSALTTFLQQKQTTTEMNQQMKIMMTVMPLFIGWISLNFP 190 Query: 536 AGLIIYWSWSNVISIVQQ 553 +GL++YW N++ I QQ Sbjct: 191 SGLVLYWVTMNIVQITQQ 208 >gi|255348610|ref|ZP_05380617.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis 70] gi|255506828|ref|ZP_05382467.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis D(s)2923] gi|296434839|gb|ADH17017.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis E/150] Length = 785 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 90/282 (31%), Positives = 150/282 (53%), Gaps = 26/282 (9%) Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLA-----IPRFEMLIDW-GWFYFIAKP----M 346 LP ++ ++AG PT+ ++ A P + I + G+F FI +P + Sbjct: 495 LPKEAGRYQFMVYAGPLADPTLKALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALL 554 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F L G++GI+I+L T+ +KLL +PL S M+ + P I E+++K K+ Sbjct: 555 FVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKHKRE 614 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + Q ++ LYK + +NP+ GC P+L+QIP A++ ++ S +R A F GWI +L Sbjct: 615 PKRA-QMEIMALYKMNKVNPITGCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNL 673 Query: 466 AAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD--KGQA 517 A D LF P + G + PI++ + MF Q K+S P +D + Q Sbjct: 674 TAPD-----VLFSWETPIWFIG-KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQE 727 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + M ++F F +FP+GL IYW S ++ ++QQ V K+ Sbjct: 728 AMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQQWVTNKI 769 >gi|315286678|ref|ZP_07872171.1| stage III sporulation protein J [Listeria ivanovii FSL F6-596] gi|313630899|gb|EFR98590.1| stage III sporulation protein J [Listeria ivanovii FSL F6-596] Length = 287 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 120/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWVITWFSDLFGGSYAVGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L + DP I PI+ +L+ F K M Sbjct: 162 KTDSFL-WMQ-LGSPDPYFIL-------------------PIVAALTTFASSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLI 246 >gi|289436080|ref|YP_003465952.1| stage III sporulation protein J [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172324|emb|CBH28870.1| stage III sporulation protein J [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 287 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 120/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWVITWFSDLFGGSYAVGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L + DP I PI+ +L+ F K M Sbjct: 162 KTDTFL-WMQ-LGSPDPYFIL-------------------PIVAALTTFASSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLI 246 >gi|332293587|ref|YP_004432196.1| membrane protein insertase, YidC/Oxa1 family [Krokinobacter diaphorus 4H-3-7-5] gi|332171673|gb|AEE20928.1| membrane protein insertase, YidC/Oxa1 family [Krokinobacter diaphorus 4H-3-7-5] Length = 628 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/261 (29%), Positives = 139/261 (53%), Gaps = 33/261 (12%) Query: 308 LFAGAKEFPTIHHYEK--DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF--GIA 363 ++ G ++ + Y++ D A+P + WG F F+ K ++++ +F L G GIA Sbjct: 331 MYYGPTDYTILKSYDQGLDEAMP-----LGWGIFGFLNK--YLVIPFFAFLTGFLPAGIA 383 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ +KLL P+ KQY S A MK ++P+I + EK K + + Q+ M LY Sbjct: 384 IIVMTISIKLLLSPVQYKQYTSQAKMKILKPEIAAISEKHKDNAMKKQQETM-ALYSKAG 442 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +P AGC P LLQIPVF+A++ + ++R F W DL++ D LPF Sbjct: 443 ASPAAGCLPALLQIPVFYALFTFFPSAFDLRGKSFL-WADDLSSYDE------IAKLPFE 495 Query: 484 LPGFM-HVGIWPIIMSLSMFIQMKMSP------PPADKG-------QAMILNWMPVVFVF 529 +P + HV ++PI+ ++++F M+++ P +G ++ + P++ + Sbjct: 496 IPFYGDHVSLFPILAAVTIFFSMRLTTGNQQMQQPTQEGMPDMSKMMKYMMYFSPLLMLV 555 Query: 530 ALSSFPAGLIIYWSWSNVISI 550 + + +GL +Y+ SN+++I Sbjct: 556 FFNQYASGLSLYYFISNLLTI 576 >gi|328469001|gb|EGF39959.1| hypothetical protein LM220_14040 [Listeria monocytogenes 220] Length = 268 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 122/226 (53%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F W++ L D P+Y I P++ +L+ F+ K M Sbjct: 162 KTDSFL-WMQ-LGNPD-----------PYY--------ILPVVAALTTFLSSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLI 246 >gi|226495803|ref|NP_001152272.1| LOC100285911 [Zea mays] gi|195654525|gb|ACG46730.1| inner membrane protein ALBINO3 [Zea mays] gi|223974117|gb|ACN31246.1| unknown [Zea mays] Length = 459 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/253 (30%), Positives = 134/253 (52%), Gaps = 30/253 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ + +++ + + ++G AI+L T+ VK PL KKQ ST M+ Sbjct: 107 GWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVESTMAMQ 166 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QP++ +++++ + ++ Q +LY+ +NPLAGC+P L IPV+ +Y+ +S + Sbjct: 167 NLQPQLKAIQQRYAGNQERI-QLETARLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNV 225 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVG--------IWPI 495 + E + WI L PT I + + PF + G +G + P+ Sbjct: 226 ANEGLLTEGFFWIPSLGG--PTTIAARQSGAGISWLFPF-VDGHPPLGWYDTICYLVLPV 282 Query: 496 IMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ S ++ M+ M PP P+ K ++L ++P + + S P+GL IYW +NV+S Sbjct: 283 LLVASQYVSMEIMKPPQSDDPSQKNTLLVLKFLPFMIGYFSLSVPSGLSIYWFTNNVLST 342 Query: 551 VQQAVIMKMHGAE 563 QQ + KM GA+ Sbjct: 343 AQQVWLRKMGGAK 355 >gi|291294533|ref|YP_003505931.1| 60 kDa inner membrane insertion protein [Meiothermus ruber DSM 1279] gi|290469492|gb|ADD26911.1| 60 kDa inner membrane insertion protein [Meiothermus ruber DSM 1279] Length = 459 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 121/223 (54%), Gaps = 29/223 (13%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 I+ + L+ + LVG ++ +AI+L T+ ++LL +PL +QY S A M+ IQP + +++ Sbjct: 254 ISLGLLWLLEEAHRLVGGSWVLAIVLVTILIRLLMWPLMHQQYKSMAEMQKIQPLLKKIQ 313 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K + + Q+ M++LY+ H INPL GC+P+LLQ+P+ F +YK++ + E Sbjct: 314 EKYKDNK-EKQQEEMMKLYQEHKINPLGGCFPLLLQMPILFLMYKIM-VGYEFGQGFL-- 369 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAM 518 WI DLA DP + P+I +FI ++ Q + Sbjct: 370 WIPDLALPDPIYVL-------------------PLIYIAVIFISTLLTSAGNKDAIRQGI 410 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 I N +VF F L SFPAG+ +Y+++ ++ I QQ I K G Sbjct: 411 IFN---LVFAFILFSFPAGVNLYYTFFTILGIGQQFYINKQLG 450 >gi|262038129|ref|ZP_06011530.1| stage III sporulation protein J [Leptotrichia goodfellowii F0264] gi|261747853|gb|EEY35291.1| stage III sporulation protein J [Leptotrichia goodfellowii F0264] Length = 224 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 124/211 (58%), Gaps = 23/211 (10%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +VGN+GIAI++ T+ V++L FPL KQ S M+ +QP++D+L+EK+K Q+LQ+ Sbjct: 27 GIVGNYGIAIIIVTIIVRILIFPLTLKQEKSMKRMRELQPQLDKLKEKYKDD-QQMLQQK 85 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAAADPTNI 473 +++YK +N+NPL GC PIL+Q+P+F A++ S A F W +K P N+ Sbjct: 86 TMEIYKENNVNPLGGCLPILIQMPIFIALFYAFSGDAIPNDATFLWFHLK-----HPDNL 140 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPADKG-----QAMILNWMPVVF 527 F + G V + PI+ ++ F Q K MS P ++G Q+M+ MP++ Sbjct: 141 FKI---------GTFAVNLLPILNTVVTFFQQKMMSGPSKEQGVNSQMQSMMYT-MPILM 190 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + + P+G+ +Y+ S V+S+ QQ +IMK Sbjct: 191 LVLFYNMPSGVTLYYLVSGVLSVAQQYIIMK 221 >gi|206901409|ref|YP_002251654.1| sporulation associated-membrane protein [Dictyoglomus thermophilum H-6-12] gi|206740512|gb|ACI19570.1| sporulation associated-membrane protein [Dictyoglomus thermophilum H-6-12] Length = 209 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 116/220 (52%), Gaps = 33/220 (15%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ FY L GN+G+AI+ + V+++ +PL Q S + IQP+I +++EKFK P Sbjct: 12 ILELFYKLTGNYGVAIIFLVILVRIILYPLTHAQLKSLFMQQKIQPEIKKIQEKFKDDPK 71 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA--PFWGWIKDLA 466 + + K ++ LY+ + INP+ GC P+L+Q P+ A+Y+++ L ++A P + WI DL Sbjct: 72 E-MNKQIMLLYQQYKINPMMGCLPLLIQFPILIALYQLL---LHYKYAVTPKFLWISDLT 127 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWM 523 D I I+M+L + ++S P K Q I+N Sbjct: 128 KPD---------------------YILLIVMALVTYFSGELSSLASSPEQKSQQRIMNIF 166 Query: 524 PVVF---VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + +F L PAG+++YW S++ ++QQ ++ ++H Sbjct: 167 TTMLFTGMFLLYKVPAGVMLYWLVSSLFQLLQQVIVFRLH 206 >gi|146297758|ref|YP_001181529.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145411334|gb|ABP68338.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 349 Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 118/249 (47%), Gaps = 34/249 (13%) Query: 338 WFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W F+A P+ L+ Y N+ G++GIAI+L T+ V+ L PL KQ ST+ M Sbjct: 5 WLDFLAIPLGRLLKLIYDFLHGANIPGSYGIAIILLTLIVRGLLLPLYIKQIASTSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P+I E+++K+K + +Q+ M++LY+ NP +GCWP+L+QIP+ FA+Y V L Sbjct: 65 VAPRIQEIQQKYK-GDQRKMQEEMLKLYQETGYNPASGCWPLLVQIPILFALYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDLAAADPTNIFT---------------LFGI---------LPFYLPGF 487 +++DL T FGI LP Sbjct: 124 VYVLGKTHQYVRDLVQGKAGYAITQTIINEAQKLGLDMHFFGINLAQKELIVLPILSAAT 183 Query: 488 MHVGIWPIIMSLSMF---IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 M + IW S F S A+ ++ + P++ F PAGL++YW+ Sbjct: 184 MFLSIWFSTNSQKRFNPQYAQSQSNAMAEGMNRTMMIFSPLMSYFIALQVPAGLVVYWTV 243 Query: 545 SNVISIVQQ 553 +N+ SI+QQ Sbjct: 244 TNLFSILQQ 252 >gi|309789712|ref|ZP_07684292.1| hypothetical protein OSCT_0243 [Oscillochloris trichoides DG6] gi|308228198|gb|EFO81846.1| hypothetical protein OSCT_0243 [Oscillochloris trichoides DG6] Length = 348 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/235 (29%), Positives = 120/235 (51%), Gaps = 21/235 (8%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WG F + + + + +F G+ + I++ T+ +L+ PL S+ M+ IQP Sbjct: 13 WGGFVGLLEQILL---WFSTTTGSVALGIVIFTICARLIILPLTLSSLRSSRQMQQIQPL 69 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--ISLEM 453 I EL+ K+ + Q LQ+ ++LY+ + INP+ GC P+LLQ+P+FF +Y+ + + +E Sbjct: 70 IKELQRKYGKDQ-QKLQEETLKLYRDYKINPVGGCLPVLLQLPIFFGVYQAVYHLMVVEQ 128 Query: 454 RHAPFWGWIKDLAAADPTNIFT--LFGILPFYLPGFMHVG---------IWPIIMSLSMF 502 R G + D +F+ LFGI+ F G + PI+ L Sbjct: 129 RVNLSAGAKAAMENPDVVALFSEKLFGIIDLGRTAFGPHGSGFAEPIYFVLPILSILLQV 188 Query: 503 IQMKMSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +Q M+ P P K + +MP+VF + +FP+G ++YW S+++ +VQQ Sbjct: 189 LQTVMATPRVQDPQQKAMTQAMMFMPLVFGYIAFTFPSGAVLYWVVSSLVGVVQQ 243 >gi|312891415|ref|ZP_07750932.1| membrane protein insertase, YidC/Oxa1 family [Mucilaginibacter paludis DSM 18603] gi|311296109|gb|EFQ73261.1| membrane protein insertase, YidC/Oxa1 family [Mucilaginibacter paludis DSM 18603] Length = 609 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/229 (31%), Positives = 127/229 (55%), Gaps = 9/229 (3%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + WG +I K +++ F G N+GI I+L TV +KL+ PL K Y+S A M+ + Sbjct: 340 LGWGPLKYINKYAVLVVFDFLKQFGWNYGIVILLLTVLLKLVLSPLTYKSYLSMAKMRVL 399 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 +P++DE++ K + P +LQ+ ++LYK +NPL GC P++LQ+P+ FA + E Sbjct: 400 KPEMDEIKAKVGEDNPTLLQQEYMKLYKKAGVNPLGGCLPMVLQLPIVFAFLRFFPALFE 459 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-P 511 +R F W+KDL+ D ++ +P H+ + ++M++S FI + Sbjct: 460 LRGESFL-WMKDLSTYD--DLIKFGTTIPLLGD---HLSLMCLLMTISTFIYTYFNNQIS 513 Query: 512 ADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 GQ + ++ PV+F+ L+ +P+GL Y+ +N+++ QQ +I M Sbjct: 514 GATGQMKYIGYITPVIFIVVLNKYPSGLNYYYFLANMLTFAQQYLIRLM 562 >gi|38372402|sp|Q9FY06|PPF1_PEA RecName: Full=Inner membrane protein PPF-1, chloroplastic; AltName: Full=Post-floral-specific protein 1; Flags: Precursor gi|2231046|emb|CAA73179.1| PPF-1 protein [Pisum sativum] Length = 442 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 79/255 (30%), Positives = 132/255 (51%), Gaps = 30/255 (11%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + GWF FI+ M ++ + + + +G AI+L TV VK PL K+Q ST Sbjct: 87 NGGWFGFISDGMEFVLKVLKDGLSSVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLA 146 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+N+QPKI ++E++ + ++ Q +LY +NPLAGC P L IPV+ +Y+ +S Sbjct: 147 MQNLQPKIKAIQERYAGNQERI-QLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALS 205 Query: 449 -ISLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVG--------IW 493 ++ E + WI L PT+I + + PF + G +G + Sbjct: 206 NVANEGLLTEGFLWIPSLGG--PTSIAARQSGSGISWLFPF-VDGHPLLGWYDTAAYLVL 262 Query: 494 PIIMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 P+++ +S ++ M+ M PP P K +I ++P++ + S P+GL IYW +NV+ Sbjct: 263 PVLLIVSQYVSMEIMKPPQTNDPNQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVL 322 Query: 549 SIVQQAVIMKMHGAE 563 S QQ + K+ GA+ Sbjct: 323 STAQQVWLRKLGGAK 337 >gi|156530446|gb|ABU75304.1| chloroplast PPF-1 [Citrus trifoliata] Length = 452 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 81/253 (32%), Positives = 134/253 (52%), Gaps = 31/253 (12%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ M ++ + + ++G AI+L TV VK+ FPL KKQ ST M+ Sbjct: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QPKI +++++ + ++ Q +LY+ +NPLAGC P L IPV+ +Y+ +S + Sbjct: 162 NLQPKIKAIQQRYAGNQERI-QLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVGIW---------P 494 + E + WI L+ PT I + +LPF + G +G W P Sbjct: 221 ANEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPF-VDGHPPLG-WHDTAAYLVLP 276 Query: 495 IIMSLSMFIQMKMSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 +++ +S + M PP PA K ++ ++P++ + S P+GL IYW +NV+S Sbjct: 277 VLLVVSQYAMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLST 336 Query: 551 VQQAVIMKMHGAE 563 QQ + K+ GA+ Sbjct: 337 AQQVWLRKLGGAK 349 >gi|227498802|ref|ZP_03928942.1| sporulation associated-membrane protein [Acidaminococcus sp. D21] gi|226904254|gb|EEH90172.1| sporulation associated-membrane protein [Acidaminococcus sp. D21] Length = 210 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 112/200 (56%), Gaps = 30/200 (15%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G+AI++ T+ +KLL +PL K+Q ST M IQP++ EL+ +++ + L + + +L Sbjct: 26 SYGLAIIIMTILIKLLLYPLTKRQIASTKAMSRIQPRMKELQMRYRDDKMK-LNEELSKL 84 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NPLAGC P+++Q+P+ I F+G I+D P++ + Sbjct: 85 YKKEGVNPLAGCLPLVIQMPIMIGI--------------FYG-IRDFNYEGPSSFLWMQS 129 Query: 479 IL---PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--KGQAMILNWMPVVFVFALSS 533 I P+Y I PI+ +L+ +IQ + S PP+D G+ M L +MP+ + Sbjct: 130 IGQPDPYY--------ILPILSALTTYIQSRQSMPPSDNPTGKVM-LYFMPLFIGYISLK 180 Query: 534 FPAGLIIYWSWSNVISIVQQ 553 FPAGL++YW N++ I QQ Sbjct: 181 FPAGLVLYWVVMNLMQIGQQ 200 >gi|212639373|ref|YP_002315893.1| stage III sporulation protein J essential for sigma-G activity [Anoxybacillus flavithermus WK1] gi|212560853|gb|ACJ33908.1| Stage III sporulation protein J essential for sigma-G activity [Anoxybacillus flavithermus WK1] Length = 260 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 120/230 (52%), Gaps = 33/230 (14%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D + Y ++K + ML F N+G+AI+ T+ V+ PL KQ+ + M+ I+P Sbjct: 43 DHYFVYPMSKLLLMLGHAFQE---NYGLAIVALTIVVRFGLLPLMIKQFRTNIVMQRIRP 99 Query: 395 KIDELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++ +L++K+K + + LQ+ M+QLY+ H +NP++GC PI +Q+P+F A+Y IS + Sbjct: 100 EMQKLQQKYKGTDMETQRKLQQEMMQLYQKHGVNPMSGCLPIFIQMPIFMALYYAISRTE 159 Query: 452 EMR-HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E++ H+ W L DP I PI+ SL+ FI M++SP Sbjct: 160 EIKLHSFLW---MQLGHRDPYFIM-------------------PILASLTTFISMRLSPS 197 Query: 511 PAD---KGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q I+++ MPV+ SS P+ L +YW SI+Q V+ Sbjct: 198 ATTTEVATQMKIMSYIMPVMIFMGASSVPSALSLYWVVGGCFSIIQSLVM 247 >gi|210624040|ref|ZP_03294157.1| hypothetical protein CLOHIR_02109 [Clostridium hiranonis DSM 13275] gi|210153247|gb|EEA84253.1| hypothetical protein CLOHIR_02109 [Clostridium hiranonis DSM 13275] Length = 235 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 113/222 (50%), Gaps = 34/222 (15%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ Y G++G+AI+L T VKLL PL KQ ST M+ I P+++E++EK+K +P Sbjct: 12 ILGAIYGFTGSYGVAIILFTFLVKLLLMPLTIKQTKSTVAMQEITPRVNEIQEKYKNNPE 71 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV----ISISLEMRHAPF------ 458 + K +++LY+ NINP+AGC P+L+Q P+ ++ + + + A F Sbjct: 72 RQ-NKEIMELYQRANINPMAGCLPLLIQFPILIGLFNLLKDPVGLGAFASQAAFNQANGQ 130 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPADKGQA 517 + W+++L D I I+ S FI K M+P GQ Sbjct: 131 FLWMQNLTNPDT---------------------ILAILSGASAFIMQKIMTPKEQVNGQM 169 Query: 518 MILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ +M F FPAGL +YW+ SN+ +I+QQ ++ K Sbjct: 170 KMMTYMMAGLSFYWGFIFPAGLTLYWTISNIFAILQQVIVTK 211 >gi|297565963|ref|YP_003684935.1| membrane protein insertase, YidC/Oxa1 family [Meiothermus silvanus DSM 9946] gi|296850412|gb|ADH63427.1| membrane protein insertase, YidC/Oxa1 family [Meiothermus silvanus DSM 9946] Length = 454 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 77/258 (29%), Positives = 130/258 (50%), Gaps = 32/258 (12%) Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 ++ G E +H E+ L +P WG ++ + +M + G++ +AI+ Sbjct: 222 VYGGQNEMVRLH-VERLLELPGLFTPDIWG---RLSLGLLWVMETGHRYTGSWFLAIVFL 277 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 T+ V+LL +PL +QY S A ++ IQP I+E+ +K+K + + + M +LY+ H +NP Sbjct: 278 TILVRLLLWPLMHQQYKSMAEIQRIQPLIEEINKKYKDNQEKRTEATM-KLYQEHKVNPA 336 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 AGC P+ LQ+P+ F ++KVIS + E W+ DLA DP I Sbjct: 337 AGCLPLFLQMPILFVLWKVIS-NYEFSQGFL--WLPDLALPDPYYIL------------- 380 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWS 545 P++ SM +S A Q+ I ++ ++F+F + FP+G+ IYW S Sbjct: 381 ------PVLYVASMIASTWLS---AHGNQSAIRQGIFINLIFIFLVLQFPSGVTIYWILS 431 Query: 546 NVISIVQQAVIMKMHGAE 563 +IS+ QQ +I + A Sbjct: 432 TLISLGQQVLINRSLAAR 449 >gi|83591337|ref|YP_431346.1| protein translocase subunit yidC [Moorella thermoacetica ATCC 39073] gi|83574251|gb|ABC20803.1| protein translocase subunit yidC [Moorella thermoacetica ATCC 39073] Length = 225 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 121/219 (55%), Gaps = 37/219 (16%) Query: 350 MSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + + YN+ + N+G+AI+L T+ VK++ +PL +Q S ++ +QPKI EL++K+K Sbjct: 12 IQFLYNITKAIGIPNYGLAIILFTIAVKVILYPLTYRQLRSMRRLQELQPKIQELQKKYK 71 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK--------VISISLEMRHA 456 S PQ Q+AM++LY+ +NPL GC P+L+Q+P+ +A++ ++ ++ + HA Sbjct: 72 -SNPQKAQQAMMELYQKEKVNPLGGCLPLLIQMPILYALFTSLRSFFNPALNPTVNLAHA 130 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DK 514 F WI +L DP I P+++++ F Q K+S D+ Sbjct: 131 NFL-WISNLGQPDPY--------------------ILPVLVAVGTFFQQKVSMVSGGQDQ 169 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 Q +L MP++ + +F AGL +YW +++ I++Q Sbjct: 170 TQKTMLFVMPLIIGWMSRNFSAGLSLYWVTFSLMGILEQ 208 >gi|172059050|ref|YP_001815510.1| 60 kDa inner membrane insertion protein [Exiguobacterium sibiricum 255-15] gi|171991571|gb|ACB62493.1| 60 kDa inner membrane insertion protein [Exiguobacterium sibiricum 255-15] Length = 284 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 76/230 (33%), Positives = 118/230 (51%), Gaps = 33/230 (14%) Query: 338 WFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ PM L+ S+F+N G++GI I++TT+ V+L+ PL KQ S M+ IQP Sbjct: 43 WKHYFVWPMAWLIREISHFFN--GDYGIGIIVTTLLVRLVILPLMIKQTKSMGGMQVIQP 100 Query: 395 KIDELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++ +LREK+ Q Q LQ+ M++LY+ HN+NPLAGC PIL+Q+P+ A Y I + Sbjct: 101 EMVKLREKYSSKDQETQQKLQQEMMKLYQEHNVNPLAGCLPILIQMPILIAFYNAIIYTP 160 Query: 452 EM-RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + +H W DL DP I PI+ ++ ++Q K+S Sbjct: 161 AIFQHTFLW---FDLGKPDPYFIL-------------------PILSAIFTYLQQKLSMA 198 Query: 511 PADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D M +L P++ + P+ L +YW + SI+ IMK Sbjct: 199 GQDDNPQMKIMLYVFPIMIFVMGVTLPSALSLYWVVGYIFSIIVTIAIMK 248 >gi|228949208|ref|ZP_04111476.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810491|gb|EEM56844.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 255 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 35/236 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQKMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +H W DL AD P+Y I P++ +++ FIQ K++ Sbjct: 156 SKHTFLW---FDLGQAD-----------PYY--------ILPVVAAITTFIQQKLA-MAG 192 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GQ AM+L MP++ + +FPA L +YW N+ I Q +I G EI Sbjct: 193 TAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLI---KGPEI 245 >gi|289422592|ref|ZP_06424435.1| 60 kDa inner membrane insertion protein [Peptostreptococcus anaerobius 653-L] gi|289157164|gb|EFD05786.1| 60 kDa inner membrane insertion protein [Peptostreptococcus anaerobius 653-L] Length = 230 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 30/227 (13%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + +++ + VG++G+AI+L T+ VK++ PL KQ ST M I PKI E++ Sbjct: 4 IANALGLVLKAIHTAVGSYGLAIILFTILVKIILMPLMVKQTKSTFAMSEINPKIKEIQA 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K P + + + +LYK +INPL+GC P+L+Q+P+ FA++ V R +G Sbjct: 64 KYKNKPEKQ-NEEISKLYKESDINPLSGCLPMLVQLPILFALFWVF------RDPMKYGV 116 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVG-------IWPIIMSLSMFIQMKMSPPPAD- 513 + A D N+ GF+ V I I+ +S ++ M+M P D Sbjct: 117 FETKQAFDAANV------------GFVWVKSLTKPDYILAILSGVSAYV-MQMVTVPKDQ 163 Query: 514 -KGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +G ++N+ MP + +F SFPA L +YW+ SN+ S++Q +I K Sbjct: 164 MQGSMKVMNYMMPALSLFWGFSFPAALTLYWTVSNLFSVLQHKIITK 210 >gi|300869651|ref|YP_003784522.1| 60 kDa inner membrane insertion protein [Brachyspira pilosicoli 95/1000] gi|300687350|gb|ADK30021.1| 60 kDa inner membrane insertion protein [Brachyspira pilosicoli 95/1000] Length = 602 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 83/331 (25%), Positives = 163/331 (49%), Gaps = 25/331 (7%) Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS-ANEIT---ILPGK 300 + + W+ ++++Y+A + P++ + + Y+ F AN I+ I G Sbjct: 252 YEGQDKWVALNNRYFAIISSPAQSNAKFETMTFSRPVTNEYRNDFHIANLISEHNIKSGS 311 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF----MLMSYFYNL 356 S+ T ++ G K Y + +E + + +P+ ++++ Y Sbjct: 312 SVVDTYSVYIGPKVRRIFSKYYLE---ESYESIFQESFLGLNLRPLTYILDIILNALYGF 368 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 ++ AI+L T+ K++ +PL Y S M+ + PKI+ +RE++K +P + L ++ Sbjct: 369 TKSYAWAIILFTLIFKIVTYPLNHASYKSMRKMQLVNPKIERIREQYKDNPEK-LNAEIM 427 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +YK INPL GC P+LL P+ A + ++ +E+R+ PF WI DL++ P +F Sbjct: 428 NIYKKEKINPLGGCLPMLLPFPLLIAFFYLMQSMVELRNTPFL-WITDLSS--PDKLFVF 484 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--------PPADKGQAMILNWMPVVFV 528 +P L GF + ++PI+M+++ ++ MK+ P A M+ P++ + Sbjct: 485 PAAIPI-LGGF-NFNLFPILMAITSYVSMKIQPSSSAGAAGGQAAMQMKMMTTIFPLMML 542 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +F +GL +YW+ NV ++QQ + K+ Sbjct: 543 LMFYNFASGLALYWTAQNVFGVIQQFITSKL 573 >gi|326510231|dbj|BAJ87332.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326514202|dbj|BAJ92251.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326520860|dbj|BAJ92793.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 449 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 84/277 (30%), Positives = 137/277 (49%), Gaps = 35/277 (12%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M +++ + + +G AI+L T+ VK PL K+Q ST M+ Sbjct: 98 GWFGFISDAMEVVLKILKDGLSAVHVPYAYGFAIILLTIVVKAATLPLTKQQVESTMAMQ 157 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QP++ ++ ++ + ++ Q +LYK +NPLAGC P L IPV+ +Y+ +S + Sbjct: 158 NLQPQLKAIQARYAGNQERI-QLETARLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNV 216 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT---------LFGILPFYLPGFMHVGIW----PII 496 + E + WI L PT I LF + + P H I P++ Sbjct: 217 ANEGLLTEGFFWIPSLGG--PTTIAARQSGAGISWLFPFVDGHPPIGWHDTICYLVLPVL 274 Query: 497 MSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + S F+ M+ M PP P+ K +IL ++P + + S P+GL IYW +NV+S Sbjct: 275 LVASQFVSMEIMKPPQSTDPSQKNTQLILKFLPFMIGYFSLSVPSGLSIYWFTNNVLSTA 334 Query: 552 QQAVIMKMHGAE-------IGLIDRLRSTFSKNYNSQ 581 QQ + K+ GA+ G+I R+ S + + Q Sbjct: 335 QQIWLRKLGGAKPAVNEGASGIITAGRAKRSGSQSGQ 371 >gi|168046980|ref|XP_001775950.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672782|gb|EDQ59315.1| predicted protein [Physcomitrella patens subsp. patens] Length = 313 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 76/255 (29%), Positives = 128/255 (50%), Gaps = 29/255 (11%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 D GW I + + +++ + + ++G AI+L TV VK +PL KKQ ST Sbjct: 33 DGGWLGGITNTLELALTFLKDGIAKIGLPYSYGFAIILLTVIVKAATYPLTKKQVESTLA 92 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+N+QPKI ++ ++ Q + +Q +LYK +NPLAGC P L +PV+ +Y+ +S Sbjct: 93 MQNLQPKIKAIQTRY-QGDQERIQLETARLYKQAGVNPLAGCLPTLATLPVWIGLYRALS 151 Query: 449 -ISLEMRHAPFWGWIKDLAAADPTNIFT---------LF----GILPFYLPGFMHVGIWP 494 ++ E + WI LA PT I LF G P + + P Sbjct: 152 NVANEGLLTEGFFWIPSLAG--PTTIAARSSGSGISWLFPFVDGAPPLGWGDTIAYLVLP 209 Query: 495 IIMSLSMFIQMKMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 +++ S ++ M++ P PA +IL ++P++ + S P+GL +YW +NV+ Sbjct: 210 VLLIGSQYVSMQIMQPATASNDPAQNQSQLILKFLPLMIGYFSLSVPSGLSLYWLTNNVL 269 Query: 549 SIVQQAVIMKMHGAE 563 S QQ + ++ GA+ Sbjct: 270 STAQQVYLRQLGGAQ 284 >gi|312879852|ref|ZP_07739652.1| membrane protein insertase, YidC/Oxa1 family [Aminomonas paucivorans DSM 12260] gi|310783143|gb|EFQ23541.1| membrane protein insertase, YidC/Oxa1 family [Aminomonas paucivorans DSM 12260] Length = 253 Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 78/258 (30%), Positives = 135/258 (52%), Gaps = 42/258 (16%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 M +++FY L ++G+AI+L T+ V++L PL+ KQ +S M+ IQP++ ++EK+ Sbjct: 1 MLGTLNFFYGLTHSYGLAIILLTLAVRVLLHPLSHKQLMSMQRMQKIQPRLKVIQEKYA- 59 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV-----------ISISLE-- 452 + L + M++LYK + +NP AGC P+L+Q+P+F +Y+V + + L+ Sbjct: 60 GDKEKLNQEMMKLYKENGVNPAAGCMPLLVQLPIFILLYRVLMQYDFAKATFLGVGLDTS 119 Query: 453 ------------MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +++A F ++ L AA P + L Y P V I +++ Sbjct: 120 ALGALAAAVGMPVKNASFGSVLQGL-AAHPEGLMR----LDLYGP----VVILIVLVGFL 170 Query: 501 MFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + Q ++S A+ Q LNW MP+ F S P G+++YW S+ IS+ QQ + M Sbjct: 171 TWFQQRLS--SANNPQMAFLNWFMPLFMSFICLSLPGGVMLYWGSSSFISVAQQWRV--M 226 Query: 560 HGAEIGLIDRLRSTFSKN 577 H AE + +++ T KN Sbjct: 227 HKAEQEM--QVKPTLHKN 242 >gi|125546414|gb|EAY92553.1| hypothetical protein OsI_14293 [Oryza sativa Indica Group] Length = 533 Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 71/237 (29%), Positives = 125/237 (52%), Gaps = 22/237 (9%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L TV VK FPL KKQ S M+++QP++ ++E++ ++ Q +LY Sbjct: 127 YGFAIILLTVLVKAATFPLTKKQVESAIAMRSLQPQVKAIQERYAGDQERI-QLETARLY 185 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAAADPTNIFT--- 475 K ++PLAGC P L+ IPV+ +Y+ +S ++ E + WI LA PT I Sbjct: 186 KLSGVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAG--PTTIAARQS 243 Query: 476 ------LF----GILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPP----PADKGQAMIL 520 LF G P + + P+++ +S ++ + M PP P+ +G ++ Sbjct: 244 GQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQGAQAVV 303 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 ++P++ + S P+GL +YW +N++S QQ + K+ GA+ + + + S+ KN Sbjct: 304 KFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYMISSLKKN 360 >gi|308803795|ref|XP_003079210.1| chloroplast membrane protein (ISS) [Ostreococcus tauri] gi|116057665|emb|CAL53868.1| chloroplast membrane protein (ISS) [Ostreococcus tauri] Length = 453 Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 118/217 (54%), Gaps = 19/217 (8%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI++ T+ VK++ +PL K Q VS+ NMKN+QP+I +REK++ + + K + ++Y+ Sbjct: 89 GNAIIIVTILVKMVTYPLTKDQVVSSLNMKNLQPQIAAIREKYEDD-QERMNKEINRVYE 147 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 + +NPLAGC P LL PV +Y+ + ++ W ++ LA PT+ L + Sbjct: 148 ENGVNPLAGCGPALLSFPVLAGLYRAFNNAGIDGAFDEPWFFLPSLAG--PTDARDLSWL 205 Query: 480 LPFYLPGFMHVG--------IWPIIMSLSMFIQMKMSPPPAD------KGQAMILNWMPV 525 LP +G ++PI+ +LS F+ M++ P D + Q+++L +P Sbjct: 206 LPLDADLAPPIGWDDASLYLLFPIMTTLSQFVSMEVLKPEEDEKTKEMQNQSVLLKLLPF 265 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + + PAGL +YW W+NV + Q V ++ GA Sbjct: 266 FIGYISLTVPAGLALYWFWNNVFTTGIQ-VYLRNGGA 301 >gi|332971199|gb|EGK10162.1| stage III sporulation protein J [Desmospora sp. 8437] Length = 261 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 118/216 (54%), Gaps = 24/216 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W + P+ L+ +F +++G++G+AI+ T+ ++L+ PL KQ S+ M+ +QP++ Sbjct: 56 WEKYFVFPLQQLLDFFNDVLGSWGLAILAATILIRLVVLPLTLKQMKSSRAMQVLQPEMK 115 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+EK+K + Q LQ+ ++L++ HN+NPLAGC P+L+Q+P+ A Y+ I + + Sbjct: 116 KLQEKYKNN-QQKLQEETMKLFQKHNVNPLAGCLPMLIQLPILIAFYQAIMREPTIAKSS 174 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F W++ L DP I L L YL + M M P + Sbjct: 175 FL-WMQ-LGEQDPYYILPLLAALTTYLQS----------------VVMGMGDNPQQRAFL 216 Query: 518 MILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQ 552 I MPV +FV A FPA L +YW +SN+ ++VQ Sbjct: 217 FI---MPVMIFVLAF-QFPAALPLYWIYSNLFTMVQ 248 >gi|148905926|gb|ABR16124.1| unknown [Picea sitchensis] Length = 471 Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 79/249 (31%), Positives = 124/249 (49%), Gaps = 24/249 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WF FIA + + + + +G AI+ TV VK+ FPL KKQ ST M+N Sbjct: 100 WFGFIADGLEGFLKVLKDGLTTVHVPYAYGFAIITLTVLVKIATFPLTKKQVESTLAMQN 159 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-IS 450 +QPKI ++E++K ++ Q +LYK +NPLAGC P L +PV+ +Y+ +S ++ Sbjct: 160 LQPKIKAIQERYKGDQERI-QLETSRLYKQAGVNPLAGCLPTLATMPVWIGLYQALSNVA 218 Query: 451 LEMRHAPFWGWIKDLAA-------ADPTNIFTLF----GILPFYLPGFMHVGIWPIIMSL 499 E + WI LA + T I LF G P + P+++ Sbjct: 219 NEGLLTEGFFWIPSLAGPTTIAARQNGTGISWLFPFVDGQPPLGWSDTFAYLVLPVLLVG 278 Query: 500 SMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 S +I M+ M P P+ K + L ++P++ + S P+GL IYW +N +S QQ Sbjct: 279 SQYISMQIMQTPQANDPSQKNTQIALKFLPLMIGYFSLSVPSGLSIYWLTNNFLSTAQQL 338 Query: 555 VIMKMHGAE 563 + K+ GA+ Sbjct: 339 WLRKLGGAK 347 >gi|148905860|gb|ABR16092.1| unknown [Picea sitchensis] Length = 471 Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 79/249 (31%), Positives = 124/249 (49%), Gaps = 24/249 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WF FIA + + + + +G AI+ TV VK+ FPL KKQ ST M+N Sbjct: 100 WFGFIADGLEGFLKVLKDGLTTVHVPYAYGFAIITLTVLVKIATFPLTKKQVESTLAMQN 159 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-IS 450 +QPKI ++E++K ++ Q +LYK +NPLAGC P L +PV+ +Y+ +S ++ Sbjct: 160 LQPKIKAIQERYKGDQERI-QLETSRLYKQAGVNPLAGCLPTLATMPVWIGLYQALSNVA 218 Query: 451 LEMRHAPFWGWIKDLAA-------ADPTNIFTLF----GILPFYLPGFMHVGIWPIIMSL 499 E + WI LA + T I LF G P + P+++ Sbjct: 219 NEGLLTEGFFWIPSLAGPTTIAARQNGTGISWLFPFVDGQPPLGWSDTFAYLVLPVLLVG 278 Query: 500 SMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 S +I M+ M P P+ K + L ++P++ + S P+GL IYW +N +S QQ Sbjct: 279 SQYISMQIMQTPQANDPSQKNTQIALKFLPLMIGYFSLSVPSGLSIYWLTNNFLSTAQQL 338 Query: 555 VIMKMHGAE 563 + K+ GA+ Sbjct: 339 WLRKLGGAK 347 >gi|255994567|ref|ZP_05427702.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium saphenum ATCC 49989] gi|255993280|gb|EEU03369.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium saphenum ATCC 49989] Length = 240 Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 106/219 (48%), Gaps = 23/219 (10%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 I PM ++S+ Y+ +GN+G+ ++L T+ VKL+ FPL K Q ++T M +QPK+ +++ Sbjct: 7 LIVLPMGKILSFLYSFIGNYGVTLILLTLIVKLVTFPLYKSQMLNTLKMAELQPKMKDIQ 66 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-------- 452 +F +L M +LYK NP GC P+L+Q+P+ F ++ ++ L Sbjct: 67 ARFGHDKA-LLGAKMQELYKEEKYNPAGGCLPMLIQMPIIFGLFSLLRDPLSYISDQQLI 125 Query: 453 -MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 H PF WI DL+ D + L G+ F I SLS QM Sbjct: 126 FAVHEPFL-WIADLSHPDKWILPILAGVATF------------ISFSLSQQAQMGTGQAN 172 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 G ++ PV V SFPAGL IYW + I I Sbjct: 173 PASGMKVMKYIFPVAIVLIGRSFPAGLAIYWFFGQFIQI 211 >gi|253573861|ref|ZP_04851203.1| inner membrane insertion protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251846338|gb|EES74344.1| inner membrane insertion protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 280 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 113/206 (54%), Gaps = 28/206 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G +GIAI++ + V+ L PL KQ S+ M+ IQP++ ++RE++K +P + Q+ M + Sbjct: 50 GAYGIAILIMVLIVRTLILPLTLKQVKSSKAMQAIQPQLQKIREQYKDNPEKQQQETM-K 108 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR-HAPFWGWIKDLAAADPTNIFTL 476 L++ H +NP+AGC+P+L+Q+PVF A+Y I + +R H+ W L +P +F L Sbjct: 109 LFQEHKVNPMAGCFPLLIQMPVFIALYNSIYYNSAIREHSFLW-----LQLGEPDKLFIL 163 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMILNWMPVVFVFALS- 532 P I +++ FIQ KM P +G + W+ + +F ++ Sbjct: 164 -----------------PAIAAITTFIQTKMMSSMNPQGMQGPMAFMMWVYPILIFVMAY 206 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558 +F A L +YW +SN+ +I Q I + Sbjct: 207 NFAAALPLYWIFSNLYTIAQNYFIYR 232 >gi|213400727|gb|ACJ47012.1| hypothetical protein [Wolbachia endosymbiont of Cordylochernes scorpioides] Length = 171 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/168 (39%), Positives = 97/168 (57%), Gaps = 4/168 (2%) Query: 222 AVLG--DKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYL 278 VLG D L E Y DI K + S +W G +DKYW + IP K + K+ Sbjct: 3 GVLGAFDNKLEEWTYKDIAKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHT 62 Query: 279 S-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + + ++QA F ILPG S++ N+ FAGAK+ + HY+ L IP F+ +D+G Sbjct: 63 NVNDIDKFQADFVKPYKNILPGASVSNVNYFFAGAKKLNLLDHYKSALNIPLFDKAVDFG 122 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + Y+S Sbjct: 123 VLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYIS 170 >gi|323487690|ref|ZP_08092948.1| membrane protein oxaA 1 [Planococcus donghaensis MPA1U2] gi|323398424|gb|EGA91212.1| membrane protein oxaA 1 [Planococcus donghaensis MPA1U2] Length = 259 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 113/224 (50%), Gaps = 23/224 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W FI P+ ++YF L+G +G I+ T+ ++L+ PL KQ S+ M+ +QP++ Sbjct: 36 WNEFIVWPLVSTITYFKGLLGTYGFGIIAVTIIIRLVMLPLMVKQTKSSKRMQEVQPELV 95 Query: 398 ELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +L+EK+K Q QK M+ L++ +NP+AGC P+++Q+PV Y IS M Sbjct: 96 KLKEKYKSKDAVTQQKYQKEMMALFQEKGVNPMAGCLPVVIQMPVLIGFYHAIS---RMN 152 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + P DL + F I P P I +I L F+ ++ P + Sbjct: 153 NTPEI----DLGS---------FLIFPLAEPSI----ILAVIAGLMQFVVLRTGPAMDNP 195 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +++ +MPV+ + P+ L +YW N+IS++Q VI + Sbjct: 196 QMRIMMYFMPVMIIGFGIVLPSALTLYWVIGNIISLIQNLVIYR 239 >gi|320104138|ref|YP_004179729.1| membrane protein insertase, YidC/Oxa1 family [Isosphaera pallida ATCC 43644] gi|319751420|gb|ADV63180.1| membrane protein insertase, YidC/Oxa1 family [Isosphaera pallida ATCC 43644] Length = 748 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 121/218 (55%), Gaps = 18/218 (8%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK---------F 403 F GN+G+AI+L T F++L FPL++KQ V M+++QP I E+++K Sbjct: 437 FGGTQGNYGVAIILMTCFIRLCLFPLSRKQAVMAKKMQDLQPLIKEIQDKIAKGRNLMDL 496 Query: 404 KQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q LQ+ LY H +NP+ AGC P L+Q+PV +++ ++ S+++R+A F +I Sbjct: 497 SQEEKLQLQQETWALYGRHKVNPISAGCLPALIQLPVMVGLWQALNQSVDLRNATFL-YI 555 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPAD---KGQAM 518 +LAA D F LPF P F + PI+ +QMK+ SPPPA+ + Q Sbjct: 556 DNLAAPDMLARFPFGWDLPFLGPYF---NLLPILAVGLTLVQMKLFSPPPANPEAEMQQK 612 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 I +M V F+F P+GL +Y+ S++ + ++ ++ Sbjct: 613 IFKYMMVFFMFMFYKLPSGLGVYFITSSLWQVGERLLV 650 >gi|302801394|ref|XP_002982453.1| hypothetical protein SELMODRAFT_12955 [Selaginella moellendorffii] gi|300149552|gb|EFJ16206.1| hypothetical protein SELMODRAFT_12955 [Selaginella moellendorffii] Length = 306 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 123/223 (55%), Gaps = 23/223 (10%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L TV VK+L FPL K Q ST +M+N+QPK+ +++++ ++ Q +LY Sbjct: 65 YGFAIILLTVLVKVLTFPLTKSQAESTISMQNLQPKLKAIQQRYAGDQERI-QMETARLY 123 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAAADPTNIFT--- 475 K +NPLAGC P L +PV+ +Y+ +S ++ E + + WI LA PT I Sbjct: 124 KQAGVNPLAGCLPTLATLPVWIGLYRALSNVANEGLLSEGFFWIPSLAG--PTTIAARQS 181 Query: 476 ---LFGILPFYLPGFMHVG--------IWPIIMSLSMFIQMK-MSPP---PADKGQAMIL 520 + + PF + G +G + P+++ S + M+ M PP P+ K +IL Sbjct: 182 GSGISWLFPF-VDGHPPLGWGDTIAYLVLPVLLIGSQYASMQIMQPPQTDPSQKNTQLIL 240 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P++ + S P+GL +YW +N++S QQ + K+ GA+ Sbjct: 241 KFLPLMIGYFALSVPSGLSLYWLTNNILSTGQQVWLRKLGGAK 283 >gi|310659886|ref|YP_003937607.1| sec-independent factor for membrane protein insertion [Clostridium sticklandii DSM 519] gi|308826664|emb|CBH22702.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Clostridium sticklandii] Length = 228 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 80/229 (34%), Positives = 128/229 (55%), Gaps = 28/229 (12%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ YN++G++ I+I++ TV VKLL PL Q S +M+ IQPK+DE+++K++ P Sbjct: 11 LLELIYNVIGDYAISIIVFTVVVKLLLLPLTLTQTKSMKSMQLIQPKMDEIKKKYQNDPD 70 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI----------SISLEMRHAPF 458 + QK M +LYK H +NPLAGC P+L+Q P+ ++ + + ++ F Sbjct: 71 KQNQKIM-ELYKEHKVNPLAGCLPLLIQFPIIIGLFNALREPVKYVFGTEAAYKIADTGF 129 Query: 459 WGWIKDLAAADPTNIFTLFGI-LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DK 514 W+ +LA+ D + L GI +PF I PI+ +++ +IQ M P D Sbjct: 130 L-WVNNLASPD---VILLGGISIPF---------ILPILAAITTYIQSAMMSPKGGKKDP 176 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q M+L P++ +F SFPAGL++YW N+ IVQQ ++ K A+ Sbjct: 177 TQTMMLYMFPIMMLFWGISFPAGLLLYWVAGNIFQIVQQYILSKPSKAK 225 >gi|295697833|ref|YP_003591071.1| membrane protein insertase, YidC/Oxa1 family [Bacillus tusciae DSM 2912] gi|295413435|gb|ADG07927.1| membrane protein insertase, YidC/Oxa1 family [Bacillus tusciae DSM 2912] Length = 246 Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 110/194 (56%), Gaps = 21/194 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++GIAI++ T+ ++L+ PL +Q + M+ +QP+ +LR+K+ + + L + M++L Sbjct: 57 DYGIAILVVTILIRLITLPLWLRQMKYSKVMQEMQPQFQKLRQKYGDNKEK-LNEEMVKL 115 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 ++ +NPL+GC P L+Q+P+ +A+Y+ I + ++ F G Sbjct: 116 FQQTGVNPLSGCLPTLIQLPILWALYQAIRSNAMLQAHEF------------------LG 157 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 I P P H I P++ +++ +IQ KM DK Q MIL MP++ +F S P+ L Sbjct: 158 IWPLGQPD--HYFILPVLAAVTTYIQSKMMLTTNDKQQQMILVMMPLMILFIAVSLPSAL 215 Query: 539 IIYWSWSNVISIVQ 552 +YW ++N+++I+Q Sbjct: 216 SLYWVYTNLLTIIQ 229 >gi|108712061|gb|ABF99856.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza sativa Japonica Group] gi|222626153|gb|EEE60285.1| hypothetical protein OsJ_13341 [Oryza sativa Japonica Group] Length = 510 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/240 (30%), Positives = 126/240 (52%), Gaps = 25/240 (10%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L TV VK FPL KKQ S M+++QP++ ++E++ ++ Q +LY Sbjct: 127 YGFAIILLTVLVKAATFPLTKKQVESAIAMRSLQPQVKAIQERYAGDQERI-QLETARLY 185 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAAADPTNIFT--- 475 K +++PLAGC P L+ IPV+ +Y+ +S ++ E + WI LA PT I Sbjct: 186 KLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAG--PTTIAARQS 243 Query: 476 ------LF----GILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPP----PADKGQAMIL 520 LF G P + + P+++ +S ++ + M PP P+ +G ++ Sbjct: 244 GQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQGAQAVV 303 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL---IDRLRSTFSKN 577 ++P++ + S P+GL +YW +N++S QQ + K+ GA+ + ID+L S N Sbjct: 304 KFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYIDKLAKEESTN 363 >gi|224104461|ref|XP_002313443.1| inner membrane protein [Populus trichocarpa] gi|222849851|gb|EEE87398.1| inner membrane protein [Populus trichocarpa] Length = 446 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 78/252 (30%), Positives = 132/252 (52%), Gaps = 28/252 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M ++ + + +G AI+L TVFVK+ PL KKQ ST M+ Sbjct: 94 GWFGFISDGMEFVLKVLKDGLSAVHVPYAYGFAIILLTVFVKVATLPLTKKQVESTLAMQ 153 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QPKI +++++ + ++ Q +LY+ +NPLAGC+P L IPV+ +Y+ +S + Sbjct: 154 NLQPKIKAIQQRYAGNQERI-QLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNV 212 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT---------LFGILPFYLP-GFMHVGIW---PII 496 + E + WI L PT I LF + + P G+ + P++ Sbjct: 213 ANEGVLTEGFFWIPSLGG--PTTIAARQSGSGISWLFPFVDGHPPLGWNDTAAYLVLPVL 270 Query: 497 MSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + +S ++ M+ M PP P K ++ ++P++ + S P+GL IYW +NV+S Sbjct: 271 LVVSQYVSMEIMKPPQTDDPTQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTA 330 Query: 552 QQAVIMKMHGAE 563 QQ + ++ GA+ Sbjct: 331 QQVWLRQLGGAK 342 >gi|310779691|ref|YP_003968024.1| protein translocase subunit yidC [Ilyobacter polytropus DSM 2926] gi|309749014|gb|ADO83676.1| protein translocase subunit yidC [Ilyobacter polytropus DSM 2926] Length = 208 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 120/219 (54%), Gaps = 19/219 (8%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI P+ ++ Y Y ++GNFG++I+ TV +KLL PL KQ S MK IQP+ID+++ Sbjct: 3 FITVPLEQIILYLYKIIGNFGLSIIGITVLIKLLLLPLTLKQDKSMKAMKRIQPEIDKIK 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K Q+L + ++LY+ + +NP AGC P+L+Q+P+ +A++ V +R AP G Sbjct: 63 EKYKND-KQLLNEKTMELYQKYKVNPAAGCLPMLVQLPILWALFAV------LRKAPVDG 115 Query: 461 WIKDLAAADPTNI-FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 I + T + TL P Y I P++ L F Q K+ ++ + Sbjct: 116 GI---VPVESTFLWLTLVNPDPLY--------ILPVLNGLVAFAQQKIMGSGSNPQMKNM 164 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + P++ VF PAGL IYW S+ I+QQ +MK Sbjct: 165 MYMFPIMMVFISYKMPAGLQIYWLTSSAAGILQQYYVMK 203 >gi|323345690|ref|ZP_08085913.1| inner membrane protein OxaA [Prevotella oralis ATCC 33269] gi|323093804|gb|EFZ36382.1| inner membrane protein OxaA [Prevotella oralis ATCC 33269] Length = 629 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 119/520 (22%), Positives = 235/520 (45%), Gaps = 61/520 (11%) Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF--AELD 125 S ++ LKN L ++N KGA + +RG+ D + N+ VTL ++ Y A+ Sbjct: 82 SEKIILKNNKLELTLNSKGATVEKAVIRGFK-DRNGNAN-VTLFDAADQYMNYTLTAKET 139 Query: 126 YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY-LFK-IV 183 +STA+ +P+ T + I L ++ + L +S++ LF Sbjct: 140 NISTADLFFVPSDVTDSTVTFTAQAGNGKNITLAYRLGTDYLLSMKMSVNGMAGLFAPNT 199 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 +T+ + D+ R +G ++ T T + V G + + +++++ Sbjct: 200 NTMDVDWKDKCRQQEKGFTFENRYATLT--------YHNVEGGTDYLNETKENVDET--- 248 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDGHARYQAKFSANEITIL-PGKS 301 + W+ ++++++V I S +S + + + Y ++ A T P Sbjct: 249 -IEDKIDWVAFKNQFFSAVMIAKNNFSANSMMTSIPQEKGSGYLKQYEAKMKTFFDPSGK 307 Query: 302 ITTTNFLFAGAKEFPTIHHYE------KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + + + G +F + E KDL + R L+ GW P+F +++ ++ Sbjct: 308 MPSEFEFYYGPNDFRLLQRIETESTFGKDLQLQR---LVYLGW------PLFRIINRWFT 358 Query: 356 L--------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 + V G+ +++ T+ +KL+ +P+ KK Y+S+A M+ ++PK+D +F + Sbjct: 359 IYVFDWLSKVFPMGVVLIMITLLLKLITYPMVKKSYMSSAKMRVLKPKLDAATAQFNKPE 418 Query: 408 PQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + ++++R F WIKDL+ Sbjct: 419 DQMQKQQAMMSEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGQSFL-WIKDLS 477 Query: 467 AADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 DP NI+ + L F + M++ Q + A Q ++ Sbjct: 478 TYDPIWEWGHNIWLIGDHLSLTCILFCVANLLYSWMTMR---QQRDQMVGAQAEQMKMMQ 534 Query: 522 W----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 W MPV F F + + +GL Y+ IS+ A IM Sbjct: 535 WMMYLMPVFFFFMFNDYSSGLNFYY----FISLFFSAAIM 570 >gi|87311362|ref|ZP_01093483.1| 60 kDa inner-membrane protein-like [Blastopirellula marina DSM 3645] gi|87285942|gb|EAQ77855.1| 60 kDa inner-membrane protein-like [Blastopirellula marina DSM 3645] Length = 788 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 90/347 (25%), Positives = 165/347 (47%), Gaps = 42/347 (12%) Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 SS F+ES+ +S + +E + Y DG TI PG Sbjct: 440 SSAMVFNESDKGPALSRGAAIVAAVVDEEQKQRTDCTYRLDGATE----------TIEPG 489 Query: 300 -KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN-LV 357 K + +F+G K+ + HY + L +GWF++++ + ++ + ++ L Sbjct: 490 DKPFELSCTIFSGPKKEELLAHY-------GLQNLEYYGWFHYVSTALLFVLHFMHDYLY 542 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 +G+ I+ T+ V+ FPL++KQ + + + P++ ++ E +K+ P + Q A + Sbjct: 543 IPYGLGIIFLTLMVRGCLFPLSRKQARNMLIQQQLAPEMKKISEMYKEDPIKQRQ-AQQE 601 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF---WGWIKDLAAADPTNIF 474 L+ +N NPL GC + LQ+P+F +Y+ +++ +++R APF W +L+A P + Sbjct: 602 LFTKYNFNPLGGCGVMFLQLPIFLGLYRALAVDIQLRQAPFIPGIEWCSNLSA--PDQAW 659 Query: 475 TLFGILPFYL---------PGFMHVG----IWPIIMSLSMFIQMKMSPPPA-DKGQAMIL 520 G+LP ++ F+ +G I P+ +Q KM PPA D+ Q M Sbjct: 660 YWVGVLPDFMTIHPSASFPASFLFLGPYLNILPLFTIALFLVQQKMFMPPAVDEQQKMQQ 719 Query: 521 NWMPVVFVFALSSF---PAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M + VF F P+GL IY+ +V I+++ +I K A++ Sbjct: 720 QMMTYMMVFIGFMFFRVPSGLCIYFITQSVWGILERKLIPKPQLADL 766 >gi|213865390|ref|ZP_03387509.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 425 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 107/205 (52%), Gaps = 8/205 (3%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGT--NNFYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G P I +A P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVG----PEIQDKMAAVA-PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGC 430 Q + M+ LYK +NP A Sbjct: 400 D-KQRQSQEMMALYKAEKVNPWAAA 423 >gi|150025942|ref|YP_001296768.1| inner membrane protein translocase component YidC [Flavobacterium psychrophilum JIP02/86] gi|149772483|emb|CAL43966.1| Inner membrane protein OxaA [Flavobacterium psychrophilum JIP02/86] Length = 633 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 77/262 (29%), Positives = 137/262 (52%), Gaps = 33/262 (12%) Query: 309 FAGAKEFPTIHHYEKDLA--IPRFEMLIDWGWF----YFIAKPMFMLMSYFYNLVGNFGI 362 + G ++ + Y K+L IP + WG F FI P+F +S + +L GI Sbjct: 330 YYGPSDYKLLKDYHKNLEKIIP-----LGWGIFGWINMFIFMPLFGFLSSYISL----GI 380 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI++ TV +K+ P+ K ++S A MK ++P+I+EL EKF + P + Q+ M +LY Sbjct: 381 AIIVFTVIIKIAMSPITYKSFLSQAKMKVLRPEINELNEKFSKDPMKKQQETM-KLYNKA 439 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP+AGC P L+QIP +A ++ ++E+R F W +DL++ D + + +P Sbjct: 440 GVNPMAGCIPALIQIPFMYASFQFFPSAIELRQKGFL-WSQDLSSFD--TVLSWKQHIPI 496 Query: 483 YLPGFM-HVGIWPIIMSLSMFIQMKMSP-------------PPADKGQAMILNWMPVVFV 528 + HV ++ ++ ++++F KM+ P K M+L P++ + Sbjct: 497 ISSVYGNHVSLFALLAAIAIFFYTKMTAGDQQMQAPQQEGMPDMAKIMKMMLYISPIMML 556 Query: 529 FALSSFPAGLIIYWSWSNVISI 550 +++ +GL +Y SNVI+I Sbjct: 557 IFFNNYGSGLSLYTLISNVITI 578 >gi|307105705|gb|EFN53953.1| hypothetical protein CHLNCDRAFT_25162 [Chlorella variabilis] Length = 423 Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 115/210 (54%), Gaps = 18/210 (8%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G AI+L TV VK+ +PL K+Q ST +M+ +QP++ EL+ K+ P+ LQ ++ Sbjct: 123 SYGFAIILLTVLVKVATYPLTKQQVESTLSMQAMQPRVKELQAKYAND-PERLQVETAKM 181 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 Y+T +NPLAGC P L IPVF +YK +S ++ E + WI LA PT + Sbjct: 182 YQTAGVNPLAGCLPSLATIPVFIGLYKALSNVASEGLLTDGFFWIPSLAG--PTTVNGGL 239 Query: 478 GILPFYLPGFMHVG--------IWPIIMSLSMFIQMK-MSPP-----PADKGQAMILNWM 523 L + G +G + PI++ +S I K +SPP PA + IL ++ Sbjct: 240 DWLFKWQDGAPLLGYGQTAAYLVLPILLVVSQAISQKVISPPQQSNDPAQQQTQAILKFL 299 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P++ + + P+GL +YW +N+I+ QQ Sbjct: 300 PLMIGWFSLNVPSGLTLYWFTNNLITTAQQ 329 >gi|315023046|gb|EFT36059.1| OxaI/YidC membrane insertion protein [Riemerella anatipestifer RA-YM] Length = 596 Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 92/322 (28%), Positives = 162/322 (50%), Gaps = 30/322 (9%) Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN-EITIL 297 ++S+ E +WL + +++ + I +K +S Y KF N E+ I Sbjct: 228 RTSMDETKEVLNWLAVKQQFFTPI-IEAKNGFKNSTGHQDMIEEGEYLKKFDFNGELEIT 286 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G+ + ++ F + + ++K+ F+ +I GW FI + YN++ Sbjct: 287 GGEFNQSFSWYFL-PLDLKLLKTFDKN-----FDEIIPLGW-SFIGTMNCWIFIPMYNMI 339 Query: 358 GNFGIA----IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 ++GIA I L T+ VK++ P+ KQ+ +A MK I+P+I+E+ K K + P Q+ Sbjct: 340 SSWGIAAGWVIFLMTILVKVVLSPIMYKQHKLSAMMKVIRPEIEEVNAKLKDADPMKKQQ 399 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A++++Y+ +N LAGC P LLQIP+F+A+++ L++R FW + DL A D Sbjct: 400 AVMEVYRKAGVNQLAGCLPALLQIPIFYALFRFFPNMLDLRGKGFW-FATDLTAYDD--- 455 Query: 474 FTLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSP----PPADKGQAMILNWM---P 524 LPF++P F+ H+ I+ + + + I M+ P +G + M P Sbjct: 456 ---LIKLPFHIP-FLGEHISIFALACTAVLLIYTVMTAGNMQQPTQEGMPNMKPLMYIFP 511 Query: 525 VVFVFALSSFPAGLIIYWSWSN 546 V+F+F L+S +GL Y+ SN Sbjct: 512 VMFLFFLNSAASGLSWYYFVSN 533 >gi|297618524|ref|YP_003703683.1| membrane protein insertase, YidC/Oxa1 family [Syntrophothermus lipocalidus DSM 12680] gi|297146361|gb|ADI03118.1| membrane protein insertase, YidC/Oxa1 family [Syntrophothermus lipocalidus DSM 12680] Length = 259 Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 30/210 (14%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G AI+L T+ +KLL +PL KQ S M+ +QP++ L+E++K+ PQ +QK + L Sbjct: 27 NYGFAIILVTIAIKLLLYPLTHKQMKSMRKMQELQPRLKLLQERYKED-PQRMQKEVFDL 85 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR-----HAPFWGWIKDLAAADPTNI 473 YK H ++PL+GC P+L+Q+P+ A Y+ + +++ HA F W+ L+ DP Sbjct: 86 YKEHGVSPLSGCLPLLIQLPILVAFYRAL---YQLKYTVPAHAAFL-WVPTLSKPDPYYG 141 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALS 532 F I+ ++ +IQ K+S P D Q +L MPV + + Sbjct: 142 FA-------------------ILAGVTTYIQQKLSTLDPNDPSQKSMLYVMPVFIAWLAA 182 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + PAGL +YW NV+SI QQA + G Sbjct: 183 TLPAGLALYWVTFNVLSIAQQAWVNARSGG 212 >gi|255034943|ref|YP_003085564.1| putative inner membrane protein translocase component YidC [Dyadobacter fermentans DSM 18053] gi|254947699|gb|ACT92399.1| 60 kDa inner membrane insertion protein [Dyadobacter fermentans DSM 18053] Length = 602 Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/256 (30%), Positives = 136/256 (53%), Gaps = 24/256 (9%) Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFY------FIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 P +H + F+ + G+ + F P+F L+ F V N+G+ I+L + Sbjct: 302 PNEYHIVDKVKAENFDQNVYLGYAFLKPINKFFLVPLFNLIEGF---VSNYGLLIILLVL 358 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 FVK L PL K Y+S A M+ + P+++++RE+ K + Q+ M +LY+ ++PL+G Sbjct: 359 FVKTLLTPLTYKSYISMAKMRILGPELEQIREQNKDDLAKQQQEQM-KLYQQVGVSPLSG 417 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM- 488 C P+L +P+ F+++ + +E+R F W DL+ D F LPF +P + Sbjct: 418 CVPVLATMPILFSLFFLFPNLIELRQQSFL-WADDLSTYDS------FFKLPFEVPFGIG 470 Query: 489 -HVGIWPIIMSLS----MFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYW 542 H+ ++ I+M+ S + + +P L + MP++F+F L+SFPAGL Y+ Sbjct: 471 NHISLFTILMTASSIGYAYYNNQNTPTQPGPVNMKALGYVMPLMFMFILNSFPAGLTFYY 530 Query: 543 SWSNVISIVQQAVIMK 558 SNV++I QQ +I + Sbjct: 531 FVSNVVTIAQQLLIKR 546 >gi|255581095|ref|XP_002531362.1| Inner membrane protein PPF-1, chloroplast precursor, putative [Ricinus communis] gi|223529022|gb|EEF31010.1| Inner membrane protein PPF-1, chloroplast precursor, putative [Ricinus communis] Length = 449 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/252 (30%), Positives = 134/252 (53%), Gaps = 28/252 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ M ++ + + + +G AI+L TV VK+ PL K+Q ST M+ Sbjct: 95 GWFGFISEGMEFVLKVLKDGLSSVHVPYSYGFAIILLTVIVKIATLPLTKQQVESTLAMQ 154 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QPKI +++++ + ++ Q +LY+ +NPLAGC+P L IPV+ +Y+ +S + Sbjct: 155 NLQPKIKAIQQRYAGNQERI-QLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNV 213 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT---------LFGILPFYLP-GFMHVGIW---PII 496 + E + WI L PT I LF + + P G+ + P++ Sbjct: 214 ANEGLLTEGFFWIPSLGG--PTTIAARQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVL 271 Query: 497 MSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + +S ++ M+ M PP PA K ++ ++P++ + S P+GL IYW +NV+S Sbjct: 272 LVVSQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFVNNVLSTA 331 Query: 552 QQAVIMKMHGAE 563 QQ + K+ GA+ Sbjct: 332 QQVWLRKLGGAK 343 >gi|281423172|ref|ZP_06254085.1| inner membrane protein OxaA [Prevotella oris F0302] gi|281402508|gb|EFB33339.1| inner membrane protein OxaA [Prevotella oris F0302] Length = 644 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 147/601 (24%), Positives = 270/601 (44%), Gaps = 81/601 (13%) Query: 8 FVAIALSVIIVYAWQN---------FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 F+ IA+ V+I ++W N +V IE +N + T + + + ++ Sbjct: 9 FLLIAV-VLIGFSWYNRPSAEEQRAAFVKDSIEHVNKSQSLKATQQAEKRKQQAERQKVL 67 Query: 59 DDRAQALSMS-----PRVELKNPSLIGSINLKGAQFDDLNLRGY--H----LDVSSNSPI 107 DD + ++ LKN + ++N KGA + ++GY H D S++ Sbjct: 68 DDTTSLFHKTLTGNAEQIVLKNKKVELTLNTKGATVEKAVIKGYVGHNLKVKDGSADQND 127 Query: 108 VTLLSPSNTKNAYF--AELDYVSTANNIELPNSNT------VWNLISGKILTPTTPIKLV 159 V L + ++ +Y A+ ++T++ +P+ T N GK LT +K V Sbjct: 128 VILFNGADQSLSYMLSAKETNINTSDLYFVPSQVTDSTVTFTANAGEGKTLT----LKYV 183 Query: 160 FKNANNILFERTISLDEHYLFK-IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 + +L + + LF T+ N D++R RG ++ AT T+ E Sbjct: 184 L-GKDYMLHMQLSAQGMSGLFSPGTQTMDVNWKDKVRQQERGFTFENR--YATLTYHKSE 240 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G G L E K +I +I + W+ ++++++V I + ++ + Sbjct: 241 G-----GTDYLNEGK--EITDEAI---EDKIDWIAFKNQFFSAVMIAKNDFKSNALMTSI 290 Query: 279 -SDGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIH------HYEKDLAIPR 329 + + Y ++ A T G+ + +F + G +F + H+ KDL + R Sbjct: 291 PQEKGSGYLKQYEAKMKTFFDPTGRQASEFDFYY-GPNDFRLLQKMERECHFAKDLQMQR 349 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVST 386 L+ GW F + + F L G N GI ++L T+ +KLL +P+ KK Y+S+ Sbjct: 350 ---LVYLGWPLFRIINRWFTLYVFDFLTGMNINMGIVLILITLLLKLLTYPMVKKSYMSS 406 Query: 387 ANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A M+ ++PK+DE ++F + Q+ Q+AM+ Y + ++PL+GC P+L+Q P++ A++ Sbjct: 407 AKMRVLKPKLDEATKQFNKPEDQMQKQQAMMSEYAKYGVSPLSGCLPMLIQAPIWIAMFN 466 Query: 446 VISISLEMRHAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + ++++R F WIKDL+ DP NI+ + L F + +M++ Sbjct: 467 FVPNAIQLRGESFL-WIKDLSTFDPIWEWNHNIWLIGDHLSLTCILFCVANVLYTVMTMR 525 Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q K Q ++ W MPV+F F + + AGL Y+ +S+ A I Sbjct: 526 ---QQKDQMVGQQADQMKMMQWMMFLMPVMFFFMFNDYSAGLNFYY----FVSLFFSAAI 578 Query: 557 M 557 M Sbjct: 579 M 579 >gi|169832372|ref|YP_001718354.1| 60 kDa inner membrane insertion protein [Candidatus Desulforudis audaxviator MP104C] gi|169639216|gb|ACA60722.1| 60 kDa inner membrane insertion protein [Candidatus Desulforudis audaxviator MP104C] Length = 300 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 75/262 (28%), Positives = 133/262 (50%), Gaps = 45/262 (17%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNL---VG--NFGIAIMLTTVFVKLLFFPLAKKQYV 384 FE LID M L+++ Y++ VG ++GIAI+L T+ +K+ PL + Q Sbjct: 2 FEALIDG---------MTALINWLYHITVGVGLPSYGIAIVLLTILIKIFLHPLTRIQMR 52 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A M +QP+I +++++ + Q +Q +++LYK +NP+AGC +L+Q+P A+Y Sbjct: 53 SMAKMSQLQPEIKAIQDRYGKDKQQ-MQTKIMELYKERKVNPMAGCLLLLVQLPFMIALY 111 Query: 445 KVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 + + + HA F W+ DL DP I P++ +++ F Sbjct: 112 QALWNFDYVNPAHAGFL-WVADLKKTDPLYIL-------------------PVLAAVTTF 151 Query: 503 IQMKMS--------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 +Q K++ P ++ Q ++L MP+ ++ PAGL +YW N++SIVQQ Sbjct: 152 VQFKLTMSVSKGGGNPSQEQMQKVMLTVMPLFIGGISATLPAGLSVYWVTFNLVSIVQQF 211 Query: 555 VIMKMHGAEIGLIDRLRSTFSK 576 I K A+ +++ R ++ Sbjct: 212 FINKQILADQSAMEQQREKAAR 233 >gi|145346453|ref|XP_001417701.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] gi|144577929|gb|ABO95994.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] Length = 264 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 120/218 (55%), Gaps = 19/218 (8%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI++ T+ VK + +PL + Q VS+ NMKN+QP+I +REK++ + + K + ++Y+ Sbjct: 47 GNAIIIVTILVKFVTYPLTRDQVVSSLNMKNLQPQIAAIREKYEDD-QERMNKEINRVYE 105 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 + +NPLAGC P LL PV +Y+ + ++ W ++ LA PT+ L + Sbjct: 106 ENGVNPLAGCGPALLTFPVLAGLYRAFNNAGIDGAFDEAWFFLPSLAG--PTDARDLSWL 163 Query: 480 LPF---YLP--GFMHVG---IWPIIMSLSMFIQMKMSPPPAD------KGQAMILNWMPV 525 LP Y P G+ I+P++ ++S F+ M++ P K Q+++L +P+ Sbjct: 164 LPLDSDYAPPIGWEEASLYLIFPVLTTISQFVSMEVLKPEETEKTDEMKNQSVLLKLLPL 223 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + PAGL +YW W+NV + Q V ++ GA+ Sbjct: 224 FIGYISLTVPAGLALYWFWNNVFTTGIQ-VFLRNGGAK 260 >gi|219848108|ref|YP_002462541.1| 60 kDa inner membrane insertion protein [Chloroflexus aggregans DSM 9485] gi|219542367|gb|ACL24105.1| 60 kDa inner membrane insertion protein [Chloroflexus aggregans DSM 9485] Length = 313 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 117/233 (50%), Gaps = 43/233 (18%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ +F +L GN + I+L T+ +L PL S+ M+ +QP + E++ K+ + P Sbjct: 14 LLLFFSSLTGNMALGIVLFTIAARLFILPLTLSSLRSSRRMQEVQPILKEIQRKYGKDP- 72 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------------SISLEMRH 455 Q LQ+ +++Y+ + INP+ GC P+LLQ+P+FF +Y+ + + + EM Sbjct: 73 QRLQEETLRVYREYKINPVGGCLPLLLQLPIFFGVYQAVYHLMVPEQRVNLSAAAAEMLK 132 Query: 456 ---------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 APF+G + A P N F F L + P++ + +Q Sbjct: 133 DERLAQILSAPFFGMDLGVPAFGP-NGFAGFAYL-----------VLPVLSIVLQLVQQL 180 Query: 507 MSPP----PADKG--QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M+ P P K QAM++ MP VF + +FP G ++YW S+VI ++QQ Sbjct: 181 MATPRVQDPQQKAFTQAMLI--MPFVFGYIAFTFPTGAVLYWVVSSVIGVIQQ 231 >gi|41469653|gb|AAS07376.1| putative inner membrane protein (with alternative splicing) [Oryza sativa Japonica Group] gi|108712060|gb|ABF99855.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza sativa Japonica Group] Length = 489 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/240 (30%), Positives = 126/240 (52%), Gaps = 25/240 (10%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L TV VK FPL KKQ S M+++QP++ ++E++ ++ Q +LY Sbjct: 127 YGFAIILLTVLVKAATFPLTKKQVESAIAMRSLQPQVKAIQERYAGDQERI-QLETARLY 185 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAAADPTNIFT--- 475 K +++PLAGC P L+ IPV+ +Y+ +S ++ E + WI LA PT I Sbjct: 186 KLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAG--PTTIAARQS 243 Query: 476 ------LF----GILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPP----PADKGQAMIL 520 LF G P + + P+++ +S ++ + M PP P+ +G ++ Sbjct: 244 GQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQGAQAVV 303 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL---IDRLRSTFSKN 577 ++P++ + S P+GL +YW +N++S QQ + K+ GA+ + ID+L S N Sbjct: 304 KFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYIDKLAKEESTN 363 >gi|313206272|ref|YP_004045449.1| protein translocase subunit yidc [Riemerella anatipestifer DSM 15868] gi|312445588|gb|ADQ81943.1| protein translocase subunit yidC [Riemerella anatipestifer DSM 15868] gi|325336286|gb|ADZ12560.1| YidC [Riemerella anatipestifer RA-GD] Length = 596 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 92/322 (28%), Positives = 162/322 (50%), Gaps = 30/322 (9%) Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN-EITIL 297 ++S+ E +WL + +++ + I +K +S Y KF N E+ I Sbjct: 228 RTSMDETKEVLNWLAVKQQFFTPI-IEAKNGFKNSTGHQDMIEEGEYLKKFDFNGELEIT 286 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G+ + ++ F + + ++K+ F+ +I GW FI + YN++ Sbjct: 287 GGEFNQSFSWYFL-PLDLKLLKTFDKN-----FDEIIPLGW-SFIGTMNRWIFIPMYNMI 339 Query: 358 GNFGIA----IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 ++GIA I L T+ VK++ P+ KQ+ +A MK I+P+I+E+ K K + P Q+ Sbjct: 340 SSWGIAAGWVIFLMTILVKVVLSPIMYKQHKLSAMMKVIRPEIEEVNAKLKDADPMKKQQ 399 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A++++Y+ +N LAGC P LLQIP+F+A+++ L++R FW + DL A D Sbjct: 400 AVMEVYRKAGVNQLAGCLPALLQIPIFYALFRFFPNMLDLRGKGFW-FATDLTAYDD--- 455 Query: 474 FTLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSP----PPADKGQAMILNWM---P 524 LPF++P F+ H+ I+ + + + I M+ P +G + M P Sbjct: 456 ---LIKLPFHIP-FLGEHISIFALACTAVLLIYTVMTAGNMQQPTQEGMPNMKPLMYIFP 511 Query: 525 VVFVFALSSFPAGLIIYWSWSN 546 V+F+F L+S +GL Y+ SN Sbjct: 512 VMFLFFLNSAASGLSWYYFVSN 533 >gi|212640679|ref|YP_002317199.1| OxaA-like protein precursor [Anoxybacillus flavithermus WK1] gi|212562159|gb|ACJ35214.1| Stage III sporulation protein J, essential for sigma-G activity [Anoxybacillus flavithermus WK1] Length = 255 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 30/223 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L++Y L G N+G+ I++ T+ ++L PL +Q ++ M+ +QP++ Sbjct: 35 WNEYIVYPLSWLITYMSELFGSNYGLGIIVVTILIRLAILPLMIQQTRNSKAMQALQPEL 94 Query: 397 DELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ + L++ H +NPLAGC P+ +Q+P+ Y I + E+ Sbjct: 95 QKLREKYSSKDAQTQQKLQQETMLLFQKHGVNPLAGCLPLFIQMPILIGFYHAIMRTEEI 154 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 RH W DL D PFY I P++ ++ FIQ KM Sbjct: 155 ARHNFLW---FDLGEKD-----------PFY--------ILPLVAGVTTFIQQKMMMAGT 192 Query: 513 DK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ AM+L MP++ V +FPA L +YW N+ I Q Sbjct: 193 EQQNPQMAMMLWLMPIMVVVFAINFPAALSLYWVVGNLFMIAQ 235 >gi|289523248|ref|ZP_06440102.1| membrane protein insertase, YidC/Oxa1 family [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503791|gb|EFD24955.1| membrane protein insertase, YidC/Oxa1 family [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 256 Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 130/231 (56%), Gaps = 19/231 (8%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 M ++++FY + ++GIAI+L T+ +++L +PL+ KQ VS M+ IQP++ L+EK+K Sbjct: 1 MLGVLNFFYEISNSYGIAIILLTILIRILLYPLSHKQLVSMKKMQQIQPRLKTLQEKYKD 60 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---------ISLEMRHA 456 Q L + +++LYK + +NP AGC P+L+Q+P+ +++VI + + ++H+ Sbjct: 61 D-RQKLNQEVMKLYKEYGVNPAAGCLPLLVQLPILILLFRVIMNYDFGEEFFVGVSLKHS 119 Query: 457 PFWGWIKDLAAADP--TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI------QMKMS 508 + L A++ I T+ G + G ++ GI+ + L + + Q KM+ Sbjct: 120 LLALMSQALGASETARAGITTVLGAIASNPAGLLNFGIYGGTLLLWLGVGFVTWFQQKMT 179 Query: 509 PPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 A Q + W MP+ +F S P G+++YW S++I +VQQA + + Sbjct: 180 TSSAASEQMAFMGWFMPLFMMFICLSLPGGVLLYWGVSSLIGVVQQAWVQR 230 >gi|260911838|ref|ZP_05918405.1| inner membrane protein OxaA [Prevotella sp. oral taxon 472 str. F0295] gi|260634049|gb|EEX52172.1| inner membrane protein OxaA [Prevotella sp. oral taxon 472 str. F0295] Length = 627 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 140/610 (22%), Positives = 265/610 (43%), Gaps = 108/610 (17%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID-DRAQALS 66 F+ I L ++ W P EE+ +++ Q +++ N+ + + A D +RAQAL Sbjct: 9 FILIGLVLVGFSLWNR----PSEEELAKQQQKEQ-IEKKNKEEQTKAKAKTDAERAQALQ 63 Query: 67 MS----------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV-- 108 + + LKN L ++ KG D + + D + N + Sbjct: 64 QATTDTSALFHKALTGEAKSIVLKNSKLQLQLSTKGGVVDKAVISNF-TDRNGNKDLTLF 122 Query: 109 -----TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +L TK+ Y + D TA+++ +GK LT IK V Sbjct: 123 QGKDQSLTYTFATKDGYVSTADLFFTASDVTDTTVTFTAEAAAGKTLT----IKYVL--G 176 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSID------QIRFSPRGRIMRHKPQTATNTFGVQ 217 N + +IS + + N SI+ Q R + + + + + A+ T+ Sbjct: 177 NEYMLHTSISATG------MGGILNPSINTVDINWQERCAQQEKGFTFESRYASLTYHNT 230 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 EG L + S +K ++ + I W+ ++++++V I + ++ Sbjct: 231 EGGTDYLSETS---EKIDEVIEDKID-------WVAFKNQFFSAVMIAKTDFGTNATLTS 280 Query: 278 L----SDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH------HYEKDLA 326 + G+ + YQAK + T P + T + G +F + H+ KDL Sbjct: 281 IPQEKGSGYLKQYQAKL---KTTFDPTGAQPTQLDFYYGPNDFRLLQKMESQSHFGKDLE 337 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNL------VG---NFGIAIMLTTVFVKLLFFP 377 + R L+ GW P+F +++ ++ L G N G+ ++L T+ +K + FP Sbjct: 338 LER---LVYLGW------PLFRIINRWFTLYVFDWLTGLDINMGVVLILITLLLKFITFP 388 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQV-LQKAMIQLYKTHNINPLAGCWPILLQ 436 L KK Y+S+A M+ ++PK++E ++F + Q+ Q+AM+ Y + ++PL+GC P+L+Q Sbjct: 389 LVKKSYLSSAKMRVLKPKLEEATKEFNKPEDQMKKQQAMMSEYAKYGVSPLSGCLPMLIQ 448 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVG 491 +P++ A++ + ++++R F WI DL+ DP NI+ + L F Sbjct: 449 MPIWIAMFNFVPNAIQLRGESFL-WIDDLSTYDPVLEWGHNIWLIGDHLSLTCILFC--- 504 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNV 547 + ++ S+ Q + Q ++ W MPV+F F + + +GL Y+ Sbjct: 505 LSNVLYSMMTMRQQRDQMVGQQAEQMKMMQWMMYLMPVMFFFMFNDYSSGLNFYY----F 560 Query: 548 ISIVQQAVIM 557 +S+ A IM Sbjct: 561 VSLFFSAAIM 570 >gi|295106384|emb|CBL03927.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Gordonibacter pamelaeae 7-10-1-b] Length = 256 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 123/225 (54%), Gaps = 11/225 (4%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F ++ +FY+ G++G+AI++ TV ++L PL KQ S+ M+ +QP + E++ K+ Sbjct: 9 IFQIIQFFYDFCGDWGLAIIIVTVIFRVLISPLMHKQTKSSFQMQKVQPLMKEIQTKYAD 68 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---ISLEMRHAPFWGWI 462 PQ Q+ M +LY NPLAGC P+LLQ+P+F A+++V+S E F+ + Sbjct: 69 D-PQRQQEEMQKLYAEVKFNPLAGCLPMLLQMPIFMALFQVLSEMGARTEGSTYEFYNLV 127 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 L FG ++P + + ++ L M +Q + A + Q +I++ Sbjct: 128 PSLVERPSEAFAQGFGT---FVPYLILMVVFAGATFLPMVLQQMNNKDSAQRKQMVIMSA 184 Query: 523 MPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAV---IMKMHGAE 563 + VF+ +S S PAG++++W S++I + QQ + IMK AE Sbjct: 185 VMSVFMLWISWSSPAGVLLFWGASSLIGLGQQQISMRIMKKRDAE 229 >gi|332668063|ref|YP_004450851.1| membrane protein oxaA [Haliscomenobacter hydrossis DSM 1100] gi|332336877|gb|AEE53978.1| Membrane protein oxaA [Haliscomenobacter hydrossis DSM 1100] Length = 634 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 122/221 (55%), Gaps = 25/221 (11%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + +P+F +++ L+ + GI I++ T VKLL FPL + S + M ++P+I+ L+E Sbjct: 368 VIRPLFSFLTW---LISSKGIVILMLTFMVKLLLFPLTYRMIYSQSKMTALKPEIERLKE 424 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 ++ +V Q + +Y+ +NPL C+P+LLQ+P++FA+Y+ S+E R A F W Sbjct: 425 RYGDDQQKV-QMETMSMYREFGVNPLGACFPMLLQLPIWFALYRFFPASIEFRQASFL-W 482 Query: 462 IKDLAAADPTNIFTLFGILPFYLP-GF-MHVGIWPIIMSLSMFI-------QMKMSPPPA 512 DL++ D F LPF +P GF H+ ++ ++ LS + M S P+ Sbjct: 483 ATDLSSYDE------FFQLPFNIPFGFGEHISLFALLWVLSTLLYTWYNSKNMDFSANPS 536 Query: 513 DKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + + MPV+F+ +S +GL Y +SN+++I Q Sbjct: 537 ----MLYMQYIMPVLFMGFFNSSASGLSAYMLFSNLLNIGQ 573 >gi|237725457|ref|ZP_04555938.1| inner membrane protein oxaA [Bacteroides sp. D4] gi|229436144|gb|EEO46221.1| inner membrane protein oxaA [Bacteroides dorei 5_1_36/D4] Length = 622 Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 92/363 (25%), Positives = 173/363 (47%), Gaps = 48/363 (13%) Query: 231 EQKYSD-----IEKSS--ISNFHESNS-------WLGISDKYWASVFIPSKETSFHSQFK 276 EQ+Y+ +EKSS ++ E+ W+ +++++SV I ++ S Sbjct: 218 EQRYTSLTYKPVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTS 277 Query: 277 YLSDGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHHYEKDLAIPR----F 330 + Y ++A+ T GK T F F G F T+ + DL++ + Sbjct: 278 TPQQEGSGYMKNYTADMTTFFDPTGKQSTNMQFYF-GPNHFKTLLN-SNDLSLSQKDLEL 335 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 E L+ GW + ++ F L G + G+ ++L T+ VK+L +P K Y+S+A Sbjct: 336 EDLVYLGWPIIRWVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSA 395 Query: 388 NMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++P I+E+ K+ K+ Q+ + LY + ++P+ GC P+L+Q+PVF A++ Sbjct: 396 KMRVLKPYINEINAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFF 455 Query: 447 ISISLEMRHAPFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 + ++E+R F W DL+ D TNI L G H+ ++ ++ S++ Sbjct: 456 VPNAIELRQQSFL-WAPDLSTYDDIINWGTNI-PLLG---------NHLSLFCLLFSITN 504 Query: 502 FIQMKMSPPPADKGQ------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + + D GQ +++ MPV+F+F + + +GL Y+ S +I I+ + Sbjct: 505 ILNTMYTMKQQDMGQQQMPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGILTMVI 564 Query: 556 IMK 558 + K Sbjct: 565 LRK 567 >gi|212693128|ref|ZP_03301256.1| hypothetical protein BACDOR_02635 [Bacteroides dorei DSM 17855] gi|212664233|gb|EEB24805.1| hypothetical protein BACDOR_02635 [Bacteroides dorei DSM 17855] Length = 622 Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 92/363 (25%), Positives = 173/363 (47%), Gaps = 48/363 (13%) Query: 231 EQKYSD-----IEKSS--ISNFHESNS-------WLGISDKYWASVFIPSKETSFHSQFK 276 EQ+Y+ +EKSS ++ E+ W+ +++++SV I ++ S Sbjct: 218 EQRYTSLTYKPVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTS 277 Query: 277 YLSDGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHHYEKDLAIPR----F 330 + Y ++A+ T GK T F F G F T+ + DL++ + Sbjct: 278 TPQQEGSGYMKNYTADMTTFFDPTGKQSTNMQFYF-GPNHFKTLLN-SNDLSLSQKDLEL 335 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 E L+ GW + ++ F L G + G+ ++L T+ VK+L +P K Y+S+A Sbjct: 336 EDLVYLGWPIIRWVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSA 395 Query: 388 NMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++P I+E+ K+ K+ Q+ + LY + ++P+ GC P+L+Q+PVF A++ Sbjct: 396 KMRVLKPYINEINAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFF 455 Query: 447 ISISLEMRHAPFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 + ++E+R F W DL+ D TNI L G H+ ++ ++ S++ Sbjct: 456 VPNAIELRQQSFL-WAPDLSTYDDIINWGTNI-PLLG---------NHLSLFCLLFSITN 504 Query: 502 FIQMKMSPPPADKGQ------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + + D GQ +++ MPV+F+F + + +GL Y+ S +I I+ + Sbjct: 505 ILNTMYTMKQQDMGQQQMPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGILTMVI 564 Query: 556 IMK 558 + K Sbjct: 565 LRK 567 >gi|237709873|ref|ZP_04540354.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|265753525|ref|ZP_06088880.1| inner membrane protein oxaA [Bacteroides sp. 3_1_33FAA] gi|229455966|gb|EEO61687.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263235239|gb|EEZ20763.1| inner membrane protein oxaA [Bacteroides sp. 3_1_33FAA] Length = 622 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 92/363 (25%), Positives = 173/363 (47%), Gaps = 48/363 (13%) Query: 231 EQKYSD-----IEKSS--ISNFHESNS-------WLGISDKYWASVFIPSKETSFHSQFK 276 EQ+Y+ +EKSS ++ E+ W+ +++++SV I ++ S Sbjct: 218 EQRYTSLTYKPVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTS 277 Query: 277 YLSDGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHHYEKDLAIPR----F 330 + Y ++A+ T GK T F F G F T+ + DL++ + Sbjct: 278 TPQQEGSGYMKNYTADMTTFFDPTGKQSTNMQFYF-GPNHFKTLLN-SNDLSLSQKDLEL 335 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 E L+ GW + ++ F L G + G+ ++L T+ VK+L +P K Y+S+A Sbjct: 336 EDLVYLGWPIIRWVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSA 395 Query: 388 NMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++P I+E+ K+ K+ Q+ + LY + ++P+ GC P+L+Q+PVF A++ Sbjct: 396 KMRVLKPYINEINAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFF 455 Query: 447 ISISLEMRHAPFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 + ++E+R F W DL+ D TNI L G H+ ++ ++ S++ Sbjct: 456 VPNAIELRQQSFL-WAPDLSTYDDIINWGTNI-PLLG---------NHLSLFCLLFSITN 504 Query: 502 FIQMKMSPPPADKGQ------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + + D GQ +++ MPV+F+F + + +GL Y+ S +I I+ + Sbjct: 505 ILNTMYTMKQQDMGQQQMPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGILTMVI 564 Query: 556 IMK 558 + K Sbjct: 565 LRK 567 >gi|288927879|ref|ZP_06421726.1| inner membrane protein OxaA [Prevotella sp. oral taxon 317 str. F0108] gi|288330713|gb|EFC69297.1| inner membrane protein OxaA [Prevotella sp. oral taxon 317 str. F0108] Length = 627 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 125/530 (23%), Positives = 233/530 (43%), Gaps = 90/530 (16%) Query: 73 LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD-YVSTAN 131 LKN L +N KG D + + + D + + + + N F+ D YVSTA+ Sbjct: 86 LKNSKLTLQLNTKGGVVDKVIISNF-TDRNGHKDLTLFQGKDQSLNYTFSTKDGYVSTAD 144 Query: 132 NIELPN--SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN- 188 P+ ++T + T IK V LD Y+ + T Sbjct: 145 LFFTPSEVTDTTVTFTAEAAAGKTLTIKYV--------------LDNEYMLHTSISATGM 190 Query: 189 --------NSID---QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 N++D Q R + + + + + A+ T+ EG L + S +K ++ Sbjct: 191 GGILNPSVNTVDINWQERCAQQEKGFTFENRYASLTYHKTEGGTDYLSESS---EKIDEV 247 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL----SDGHAR-YQAKFSAN 292 + I W+ ++++++V I + ++ + G+ + YQAK Sbjct: 248 IEDKID-------WVAFKNQFFSAVMIAKTDFGTNATLTSIPQEKGSGYLKQYQAKL--- 297 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIH------HYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + P S T + G +F + H+ KDL + R L+ GW P+ Sbjct: 298 KTAFDPTGSQPTQLDFYYGPNDFRLLQKMESKSHFGKDLELER---LVYLGW------PL 348 Query: 347 FMLMSYFYNL------VG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F +++ ++ L G N G+ ++L T+ +K + FPL KK Y+S+A M+ ++PK++ Sbjct: 349 FRIINRWFTLYVFDWLTGLNINMGVVLILITLLLKFITFPLVKKSYLSSAKMRVLKPKLE 408 Query: 398 ELREKFKQSPPQV-LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E ++F + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + ++++R Sbjct: 409 EATKEFNKPEDQMKKQQAMMSEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGE 468 Query: 457 PFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 F WIKDL+ DP NI+ + L F + +M++ Q + Sbjct: 469 SFL-WIKDLSTYDPVLEWGHNIWLIGDHLSLTCILFCLSNVLYSMMTMR---QQRDQMVG 524 Query: 512 ADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q ++ W MPV+F F + + +GL Y+ +S+ A IM Sbjct: 525 QQAEQMKMMQWMMYLMPVMFFFMFNDYSSGLNFYY----FVSLFFSAAIM 570 >gi|251800247|ref|YP_003014978.1| hypothetical protein Pjdr2_6289 [Paenibacillus sp. JDR-2] gi|247547873|gb|ACT04892.1| 60 kDa inner membrane insertion protein [Paenibacillus sp. JDR-2] Length = 258 Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 113/199 (56%), Gaps = 27/199 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G++G+AI+L T+ V+ PL KQY S+ M+ IQP++ E+++K K +P Q Q+ ++ Sbjct: 65 GSYGLAILLITIIVRTAILPLTLKQYRSSKAMQAIQPQMAEIKKKHKDNP-QKQQEETMK 123 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 L++ + +NP+AGC P+L+Q+PVF A+Y I + E+R F G L +P Sbjct: 124 LFQANKVNPMAGCLPLLVQMPVFMALYNSIYWNPEVRTHEFLG----LQLGEPG------ 173 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNWMPV-VFVFALSS 533 P+Y PII + + F+Q KM + G +L PV +FV AL + Sbjct: 174 ---PWYF--------LPIIAAATTFVQSKMMQKQQTQTMPGMGAMLMIFPVLIFVMAL-N 221 Query: 534 FPAGLIIYWSWSNVISIVQ 552 FP+ L +YW +SN+ +I+Q Sbjct: 222 FPSALPLYWIFSNLYTIIQ 240 >gi|291514659|emb|CBK63869.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Alistipes shahii WAL 8301] Length = 648 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 114/199 (57%), Gaps = 14/199 (7%) Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPL 427 + VKL+ PL K YVS A M+ ++P+IDEL +K+ K Q+A ++LYK INP+ Sbjct: 411 LLVKLVISPLTYKSYVSMAKMRLVKPQIDELAKKYPKPEDAMKKQQATMELYKKAGINPM 470 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+Q+P+ A+++ S+E+R PF W DL++ D +I L +PFY Sbjct: 471 GGCIPMLIQMPILIAMFRFFPASIELREQPFL-WADDLSSYD--SIVNLPFSIPFYGD-- 525 Query: 488 MHVGIWPIIMSLSMF------IQMKMSPPPADKGQAM-ILNWMPVVFVFALSSFPAGLII 540 HV ++ ++M++S+F Q S P G ++ MP++ +F +S+ +GL Sbjct: 526 -HVSLFALLMAVSLFGYSWFNYQQTASSQPQMAGMKFMMVYMMPIMMLFWFNSYSSGLCY 584 Query: 541 YWSWSNVISIVQQAVIMKM 559 Y+ SN+ +I Q VI +M Sbjct: 585 YYLLSNIFTIGQTLVIRRM 603 >gi|213400715|gb|ACJ47006.1| hypothetical protein [Wolbachia endosymbiont of Drosophila simulans] Length = 171 Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 65/171 (38%), Positives = 97/171 (56%), Gaps = 3/171 (1%) Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275 EG + +K L E Y DI K + S +W G +DKYW + IP K + Sbjct: 1 HEGVLGAFNNK-LEEWTYKDISKKRLIKASTSEKNWFGFADKYWLTAIIPKKSDKINVSI 59 Query: 276 KYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 K+ + + ++QA F ILPG S +T N+ FAGAK+ + Y+ L IP F+ + Sbjct: 60 KHTNVNNIDKFQADFVRPYTHILPGTSASTLNYFFAGAKKLNLLDSYKDTLNIPLFDKAV 119 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 D+G YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + Y+S Sbjct: 120 DFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYIS 170 >gi|213400717|gb|ACJ47007.1| hypothetical protein [Wolbachia endosymbiont of Tribolium confusum] Length = 171 Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 65/171 (38%), Positives = 97/171 (56%), Gaps = 3/171 (1%) Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275 EG + +K L E Y DI K + S +W G +DKYW + IP K + Sbjct: 1 HEGVLGAFNNK-LEEWTYKDISKKRLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSI 59 Query: 276 KYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 K+ + + ++QA F ILPG S +T N+ FAGAK+ + Y+ L IP F+ + Sbjct: 60 KHTNVNNIDKFQADFVRPYTHILPGTSASTLNYFFAGAKKLNLLDSYKDTLNIPLFDKAV 119 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 D+G YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + Y+S Sbjct: 120 DFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYIS 170 >gi|257792846|ref|YP_003183452.1| 60 kDa inner membrane insertion protein [Eggerthella lenta DSM 2243] gi|317489239|ref|ZP_07947756.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp. 1_3_56FAA] gi|325832339|ref|ZP_08165338.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1] gi|257476743|gb|ACV57063.1| 60 kDa inner membrane insertion protein [Eggerthella lenta DSM 2243] gi|316911640|gb|EFV33232.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp. 1_3_56FAA] gi|325486175|gb|EGC88629.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1] Length = 261 Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 126/227 (55%), Gaps = 15/227 (6%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F ++ +FY+ G++G+AI++ TV ++L PL KQ S+ M+ +QP + EL+ K+ Sbjct: 9 IFDIIHFFYDFCGDWGLAIIIVTVIFRILISPLMHKQTKSSFQMQKVQPLMQELQRKYAD 68 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA----PFWGW 461 P+ LQ+ M +LY NPLAGC P+LLQ+P+F A+++V+S + R + F+ Sbjct: 69 DQPR-LQEEMQKLYAEVKFNPLAGCLPMLLQMPIFMALFQVLS-EMGSRTSGTTYEFYNL 126 Query: 462 IKDLAAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 + L + FG +P+ + + G + M L +QM P K Q MI+ Sbjct: 127 VPSLVMRPSEALAVGFGTFVPYLILMVIFAGATFLPMVL---MQMGNKDNPQRK-QTMIM 182 Query: 521 NWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAV---IMKMHGAE 563 + VF+ +S S PAG++++W S+++ I QQ + IMK AE Sbjct: 183 AAVMSVFMLWISWSSPAGVLLFWGASSLMGIAQQQISMRIMKKRDAE 229 >gi|146300139|ref|YP_001194730.1| putative inner membrane protein translocase component YidC [Flavobacterium johnsoniae UW101] gi|146154557|gb|ABQ05411.1| protein translocase subunit yidC [Flavobacterium johnsoniae UW101] Length = 636 Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 80/258 (31%), Positives = 139/258 (53%), Gaps = 31/258 (12%) Query: 311 GAKEFPTIHHYEKDLA--IPRFEMLIDWGWFYFIAKPMFM-LMSYFYNLVG-NFGIAIML 366 G ++ + Y+K+ IP + WG F +I K +F+ L + + +G + GIAI++ Sbjct: 336 GPADYKVLKSYDKNFQKIIP-----LGWGIFGWINKLIFVPLFGFLSSTIGLSLGIAIII 390 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 T+ +KL P+ K ++S A MK ++P I EL EKFK+ P + Q+ M +LY +NP Sbjct: 391 FTIIIKLAMSPITYKSFLSQAKMKVLRPDIAELGEKFKKDPMKKQQETM-KLYNKAGVNP 449 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 +AGC P L+Q+P +A ++ + E+R F W DL++ D LPF++P Sbjct: 450 MAGCIPALIQLPFMYASFQFFPAAFELRQKGFL-WADDLSSFDSVV------KLPFHIPL 502 Query: 487 FM-HVGIWPIIMSLSMFIQMKMS------PPPADKGQAMILNWM-------PVVFVFALS 532 + H+ ++PI+ ++++F MKM+ P +G + M P++ + + Sbjct: 503 YGDHISLFPILAAIAIFFYMKMTSGDQQMAAPQQEGMPDMAKMMKIMIYVSPLMMLIFFN 562 Query: 533 SFPAGLIIYWSWSNVISI 550 S+ AGL +Y SN+I+I Sbjct: 563 SYGAGLSLYNFISNLITI 580 >gi|149182294|ref|ZP_01860773.1| OxaA-like protein precursor [Bacillus sp. SG-1] gi|148849986|gb|EDL64157.1| OxaA-like protein precursor [Bacillus sp. SG-1] Length = 238 Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 69/224 (30%), Positives = 117/224 (52%), Gaps = 32/224 (14%) Query: 338 WFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W +I P+ +L+ S F++ G++G+ I++ T+ ++L PL KQ ++ M+ +QP Sbjct: 15 WNEYIVYPLSLLIIKVSEFFD--GSYGLGIIIVTLIIRLAILPLMIKQTKNSKAMQALQP 72 Query: 395 KIDELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++ +LREK+ Q LQ+ + L++ H +NPLAGC+P+++Q+P+ Y I + Sbjct: 73 EMQKLREKYSSKDAQTQQKLQQETMGLFQKHGVNPLAGCFPLIVQMPILIGFYHAIVRTE 132 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---S 508 E+++ F W DL D P YL P+I ++ FIQ KM Sbjct: 133 EIKNHTFL-WF-DLGQPD-----------PLYL--------LPLIAGVTTFIQQKMMMAG 171 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + AM+L MPV+ + +FPA L +YW N+ I+Q Sbjct: 172 TANQNPQMAMMLYIMPVMIIIFAINFPAALSLYWVVGNIFMIIQ 215 >gi|311032253|ref|ZP_07710343.1| OxaA-like protein precursor [Bacillus sp. m3-13] Length = 260 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 27/221 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ L++YF L+ N +G++I++ T+ ++ PL KQ + M+ +QP++ Sbjct: 36 WNEYVVYPLSWLITYFAELMNNDYGLSIIIVTLLIRFAILPLMIKQTKNAKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 LREK+ Q Q LQ+ + L++ H +NPLAGC+P+L+Q+P+ + I+ + E+ Sbjct: 96 KALREKYSSKDQKTQQKLQQETMGLFQKHGVNPLAGCFPLLVQMPILIGFFHAITRTTEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W DL DP I P++ ++ FIQ K+ D Sbjct: 156 ANHNFM-WF-DLGDPDPYFIL-------------------PVVAGITTFIQQKIMMAGMD 194 Query: 514 KGQAMILN-W-MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M++ W MP++ V +FPA L +YW N+ IVQ Sbjct: 195 NNPQMVMMLWIMPIMIVVFAINFPAALSLYWVVGNIFMIVQ 235 >gi|150005858|ref|YP_001300602.1| putative inner membrane protein translocase component YidC [Bacteroides vulgatus ATCC 8482] gi|254881961|ref|ZP_05254671.1| inner membrane protein oxaA [Bacteroides sp. 4_3_47FAA] gi|294775570|ref|ZP_06741080.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides vulgatus PC510] gi|319641034|ref|ZP_07995739.1| inner membrane protein oxaA [Bacteroides sp. 3_1_40A] gi|166975850|sp|A6L5L6|OXAA_BACV8 RecName: Full=Inner membrane protein oxaA gi|149934282|gb|ABR40980.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|254834754|gb|EET15063.1| inner membrane protein oxaA [Bacteroides sp. 4_3_47FAA] gi|294450620|gb|EFG19110.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides vulgatus PC510] gi|317387344|gb|EFV68218.1| inner membrane protein oxaA [Bacteroides sp. 3_1_40A] Length = 621 Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 92/363 (25%), Positives = 173/363 (47%), Gaps = 48/363 (13%) Query: 231 EQKYSD-----IEKSS--ISNFHESNS-------WLGISDKYWASVFIPSKETSFHSQFK 276 EQ+Y+ +EKSS ++ E+ W+ +++++SV I ++ S Sbjct: 218 EQRYTSLTYKPVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTS 277 Query: 277 YLSDGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHHYEKDLAIPR----F 330 + Y ++A+ T GK T F F G F T+ + DL++ + Sbjct: 278 TPQQEGSGYMKNYTADMTTFFDPTGKQPTDMQFYF-GPNHFKTLLN-SNDLSLSQKDLEL 335 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 E L+ GW + ++ F L G + G+ ++L T+ VK+L +P K Y+S+A Sbjct: 336 EDLVYLGWPIIRWVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSA 395 Query: 388 NMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++P I+E+ K+ K+ Q+ + LY + ++P+ GC P+L+Q+PVF A++ Sbjct: 396 KMRVLKPYINEINAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFF 455 Query: 447 ISISLEMRHAPFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 + ++E+R F W DL+ D TNI L G H+ ++ ++ S++ Sbjct: 456 VPNAIELRQQSFL-WAPDLSTYDDIINWGTNI-PLLG---------NHLSLFCLLFSITN 504 Query: 502 FIQMKMSPPPADKGQ------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + + D GQ +++ MPV+F+F + + +GL Y+ S +I I+ + Sbjct: 505 ILNTMYTMKQQDMGQQQMPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGILTMVI 564 Query: 556 IMK 558 + K Sbjct: 565 LRK 567 >gi|330444486|ref|YP_004377472.1| 60 kDa inner membrane protein [Chlamydophila pecorum E58] gi|328807596|gb|AEB41769.1| 60 kDa inner membrane protein [Chlamydophila pecorum E58] Length = 714 Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 90/293 (30%), Positives = 153/293 (52%), Gaps = 27/293 (9%) Query: 287 AKFSANEITI-LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI-----PRFEMLIDW-GWF 339 AK+ E + LP ++ ++ ++AG P++ +K P++ I G+ Sbjct: 410 AKYPGYETLMPLPKEAGSSKFLVYAGPLAEPSLKTLDKTFTKENGENPQYLSCISLRGFL 469 Query: 340 YFIAKP----MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 FI P +F++M +F L G++G++I+L TVF+KLL +PL S M+ + P Sbjct: 470 SFITAPFASLLFVIMKFFKALTGSWGLSIVLLTVFLKLLLYPLNAWSIRSMRRMQKLSPY 529 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I ++++K+K+ P + Q ++ LYK + +NP+ GC P+L+Q+P A++ ++ S +R Sbjct: 530 IQQIQQKYKKEPRRA-QMEVMALYKANKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRG 588 Query: 456 AP-FWGWIKDLAAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMS----- 508 A F GWI +L A D LF P + G + PII+ L MF+Q KM+ Sbjct: 589 ASLFPGWIDNLTAPD-----VLFSWQHPIWFIG-NEFHVLPIILGLVMFVQQKMTNYNKQ 642 Query: 509 --PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + Q + M ++F +FP+GL IYW S ++ I+QQ V K+ Sbjct: 643 GQMTEQQRQQQTMGTVMAILFTAMFYNFPSGLNIYWLSSMILGIIQQWVTNKV 695 >gi|325297917|ref|YP_004257834.1| Membrane protein oxaA [Bacteroides salanitronis DSM 18170] gi|324317470|gb|ADY35361.1| Membrane protein oxaA [Bacteroides salanitronis DSM 18170] Length = 621 Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 88/347 (25%), Positives = 159/347 (45%), Gaps = 44/347 (12%) Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 EK +I E+ W+ ++Y++ VF+ K + + + Y ++ A+ T Sbjct: 240 EKETIP---EALDWVAFKNQYFSCVFMAEKNFENATLDSKMEQKESGYMKRYHADMQTAF 296 Query: 298 PGKSITTTNFLFA-GAKEFPTIHHYEK---DLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 ++F F G F T+ K D E L+ GW P+ L++ + Sbjct: 297 DPTGAQPSHFQFYFGPNHFKTLLASNKLSFDNKDQELEDLVYLGW------PIIRLINRW 350 Query: 354 YN------LVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF- 403 + L G + GI I+L T+ VK+L P K ++S+A M+ ++P +D++ EK+ Sbjct: 351 FTINLFDWLSGMGLSMGIVILLMTIIVKILVLPTTWKSFISSAKMRALKPYVDKINEKYP 410 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 KQ Q+ + LY + ++P+ GC P+L+Q PVF A++ + ++E+R F W Sbjct: 411 KQEDALKKQQETMSLYSQYGVSPMGGCLPMLIQTPVFMALFFFVPNAIELRQQSFL-WAD 469 Query: 464 DLAAADP----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG---Q 516 DL+A D + L G H+ ++ ++ S + I + D G Q Sbjct: 470 DLSAYDDLIHWSTSIPLLG---------NHLSLFCLLFSATTVINQIVMMKQQDTGANPQ 520 Query: 517 AMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + W MPV+F F + + +GL Y+ S ++ I+ V+ +M Sbjct: 521 MAAMKWMMYIMPVMFFFIFNEYASGLSYYYFISGLLGILTLWVMRRM 567 >gi|260893979|ref|YP_003240076.1| membrane protein insertase, YidC/Oxa1 family [Ammonifex degensii KC4] gi|260866120|gb|ACX53226.1| membrane protein insertase, YidC/Oxa1 family [Ammonifex degensii KC4] Length = 231 Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 72/217 (33%), Positives = 125/217 (57%), Gaps = 30/217 (13%) Query: 346 MFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 M L+ + Y + V N+G+AI++ T+ V+L+ FPL +Q S ++ + PKI EL+ Sbjct: 12 MATLLEWLYKVTVAIGVPNYGLAIIMLTILVRLVLFPLNYRQMRSVVALQQLHPKIKELQ 71 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK-VISISLEM-RHAPF 458 E++KQ PQ LQ+ +++LY+ HN+NP+AGC P+L+Q+P+ A+Y+ ++S + HA F Sbjct: 72 ERYKQD-PQKLQQKLMELYREHNVNPMAGCLPLLIQLPILIALYRALLSFPYTVAEHARF 130 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQ 516 W+ L+ DP I P++ ++ + QMK++P A ++ Q Sbjct: 131 L-WVPSLSHTDPYFIL-------------------PVLAGVTTYWQMKITPQAAGQEQQQ 170 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M+ M + ++ ++ PAGL +YW N+IS+ QQ Sbjct: 171 RMMGILMSGMILWISATLPAGLALYWVVYNLISVAQQ 207 >gi|291165949|gb|EFE27996.1| stage III sporulation protein J [Filifactor alocis ATCC 35896] Length = 243 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 40/240 (16%) Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ML+ Y + N+G+AI+ T+ VKL PL Q S M IQP I ++++K+ + Sbjct: 1 MLLKMIYTVTQNYGLAIIFFTIIVKLAMLPLTLSQNKSMMEMNKIQPLIQDIQKKYPKD- 59 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---------SISLEMRHAPF 458 Q + QLYK H +NP+ GC P+L+Q+P+ FA+++ + S +L Sbjct: 60 KQKQAELTTQLYKEHGVNPMMGCLPLLVQMPILFALFRALRNPVEYVFGSETLFQVADTS 119 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---------- 508 + W+K+L++ D I GF I+PI+ + + FI KM+ Sbjct: 120 FLWLKNLSSPDIITI-----------GGFAFPFIFPIVAAAATFIDTKMTMLKNDKKKEK 168 Query: 509 ---------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 P + Q +L MP++ + SFPAGL IYW+ S + SI Q+ ++ ++ Sbjct: 169 QKDGKQNQPENPGESMQKTMLYMMPLMIFWWGRSFPAGLSIYWAVSTLFSIAQRKIVERI 228 >gi|198275307|ref|ZP_03207838.1| hypothetical protein BACPLE_01468 [Bacteroides plebeius DSM 17135] gi|198271890|gb|EDY96160.1| hypothetical protein BACPLE_01468 [Bacteroides plebeius DSM 17135] Length = 619 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 89/349 (25%), Positives = 159/349 (45%), Gaps = 48/349 (13%) Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 EK +I ES W+ ++Y++ VF+ + + + + Y ++A+ T Sbjct: 240 EKETIP---ESLDWVAFKNQYFSCVFMAEQNFDNATLESKMEQQGSGYMKNYAADMKTAF 296 Query: 298 P--GKSITTTNFLFAGAKEFPTIHHYEKDLAIP----RFEMLIDWGWFYFIAKPMFMLMS 351 G + F F G F T+ DL+ E L+ GW P+ L++ Sbjct: 297 DPTGAKASHMQFYF-GPNHFKTLLA-SNDLSFKDKDQELEDLVYLGW------PIIRLIN 348 Query: 352 YFYN------LVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 ++ L G + G+ I+L T+ VK+L P K ++S+A M+ ++P +D++ K Sbjct: 349 RWFTINLFDWLSGWGLSMGMVILLMTIIVKVLVLPTTWKSFISSAKMRALKPYVDKINAK 408 Query: 403 F-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + KQ Q+ + LY+ +N++P+ GC P+LLQ PVF A++ + ++E+R F W Sbjct: 409 YPKQEDALKKQQETMALYRQYNVSPMGGCLPMLLQTPVFMALFFFVPNAIELRQQGFL-W 467 Query: 462 IKDLAAADP-----------TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 DL+A D N +LF +L I ++ + M Q M Sbjct: 468 ADDLSAYDDLISWSYHIPLLGNHLSLFCLL---------FSITTVLNQIIMMKQQDMGNN 518 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 P ++ MPV+F F + + +GL Y+ S +I I+ ++ +M Sbjct: 519 PQMAAMKWMMYIMPVMFFFIFNDYASGLSYYYFISGLIGIITMWIMRRM 567 >gi|326489461|dbj|BAK01711.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 512 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 78/269 (28%), Positives = 129/269 (47%), Gaps = 33/269 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WF I M ++ + + +G AI+L TV +K FPL KKQ S M++ Sbjct: 99 WFAGITGSMETVLKVLKDGLSTLHVPYPYGFAIILLTVLIKGATFPLTKKQVESALAMRS 158 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-IS 450 +QP++ ++E+ ++ Q LYK ++PLAGC P L+ IPV+ +YK +S ++ Sbjct: 159 LQPQVKAIQERHAGDQERI-QLETAHLYKLSGVDPLAGCLPTLVTIPVWIGLYKALSNVA 217 Query: 451 LEMRHAPFWGWIKDLAAADPTNI--------------FTLFGILPFYLPGFMHVGIWPII 496 E + WI LA PT I FT G P P + + P++ Sbjct: 218 NEGLLTEGFFWIPSLAG--PTTIAARESGQGISWIFPFT-DGHPPLGWPDTLAYLVLPVL 274 Query: 497 MSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + +S ++ Q S P+ +G + ++P++ + S P+GL +YW +NV+S Sbjct: 275 LVISQYVSAQIMQSSQSNDPSQQGAQAAVKFLPLLIGYFALSVPSGLSLYWLTNNVLSSA 334 Query: 552 QQAVIMKMHGAEIGL---IDRLRSTFSKN 577 QQ + K+ GA+ + ID+L S N Sbjct: 335 QQVWLQKLGGAKNPVQEYIDKLGREESTN 363 >gi|299140577|ref|ZP_07033715.1| inner membrane protein OxaA [Prevotella oris C735] gi|298577543|gb|EFI49411.1| inner membrane protein OxaA [Prevotella oris C735] Length = 644 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 134/527 (25%), Positives = 243/527 (46%), Gaps = 66/527 (12%) Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGY--H----LDVSSNSPIVTLLSPSNTKNAYF 121 + ++ LKN + ++N KGA + ++GY H D S++ V L + ++ +Y Sbjct: 82 AEQIVLKNKKVELTLNTKGATVEKAVIKGYVGHNLKVKDGSADQKDVILFNGADQSLSYM 141 Query: 122 --AELDYVSTANNIELPNSNT------VWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ ++T++ +P+ T N GK LT +K V + +L + + Sbjct: 142 LSAKETNINTSDLYFVPSQVTDSTVTFTANAGEGKTLT----LKYVL-GKDYMLHMQLSA 196 Query: 174 LDEHYLFK-IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 LF T+ N D++R RG ++ AT T+ EG G L E Sbjct: 197 QGMAGLFSPGTQTMDVNWKDKVRQQERGFTFENR--YATLTYHKSEG-----GTDYLNEG 249 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDGHARYQAKFSA 291 K +I +I + W+ ++++++V I + ++ + + + Y ++ A Sbjct: 250 K--EITDEAI---EDKIDWIAFKNQFFSAVMIAKNDFQNNALMTSIPQEKGSGYLKQYEA 304 Query: 292 NEITILP--GKSITTTNFLFAGAKEFPTIH------HYEKDLAIPRFEMLIDWGWFYFIA 343 T GK + +F + G +F + H+ KDL + R L+ GW F Sbjct: 305 KMKTFFDPTGKQASEFDFYY-GPNDFRLLQKMEGECHFGKDLQMQR---LVYLGWPLFRI 360 Query: 344 KPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + F L G N GI ++L T+ +KLL +P+ KK Y+S+A M+ ++PK+DE Sbjct: 361 INRWFTLYVFDFLTGMNINMGIVLILITLLLKLLTYPMVKKSYMSSAKMRVLKPKLDEAT 420 Query: 401 EKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 ++F + Q+ Q+AM+ Y + ++PL+GC P+L+Q P++ A++ + ++++R F Sbjct: 421 KQFNKPEDQMQKQQAMMSEYAKYGVSPLSGCLPMLIQAPIWIAMFNFVPNAIQLRGESFL 480 Query: 460 GWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 WIKDL+ DP NI+ + L F + +M++ Q K Sbjct: 481 -WIKDLSTFDPIWEWNHNIWLIGDHLSLTCILFCVANVLYTVMTMR---QQKDQMVGQQA 536 Query: 515 GQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q ++ W MPV+F F + + AGL Y+ +S+ A IM Sbjct: 537 DQMKMMQWMMFLMPVMFFFMFNDYSAGLNFYY----FVSLFFSAAIM 579 >gi|289803256|ref|ZP_06533885.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 133 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/153 (37%), Positives = 87/153 (56%), Gaps = 21/153 (13%) Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF Sbjct: 1 MRERLGDDK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPF 59 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQA 517 WI DL+A DP I PI+M ++MF KMSP D Q Sbjct: 60 ALWIHDLSAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQ 100 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 I+ +MPV+F FP+GL++Y+ SN+++I Sbjct: 101 KIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTI 133 >gi|222530703|ref|YP_002574585.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor bescii DSM 6725] gi|222457550|gb|ACM61812.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor bescii DSM 6725] Length = 341 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 44/254 (17%) Query: 338 WFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W F+A P+ L+ + Y+ + G++GIAI+L T+ V+ L PL KQ ST+ M Sbjct: 5 WLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAIILLTLIVRGLLLPLYIKQIQSTSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P++ E+++K+K + +Q+ M++LY+ NP GCWP+L+QIP+ F++Y V L Sbjct: 65 VAPRLQEIQQKYKNDQKK-MQEEMLKLYQETGYNPAGGCWPLLIQIPILFSLYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDL-AAADPTNI--------------FTLFGI---------LPFYLPGF 487 ++KDL A NI FGI LP F Sbjct: 124 VYVLGKSHQYVKDLITGATGYNITQRIVNEAQKLGLDMHFFGINLAQKELIVLPILSAVF 183 Query: 488 MHVGIWPIIMSLSMFIQMKMSPP-PADKGQAM-------ILNWMPVVFVFALSSFPAGLI 539 + I SM Q K +P + + AM ++ + P++ F P+GL+ Sbjct: 184 SFLSIL-----YSMNSQKKFNPQYSSSQTNAMAEGMNRSLMIFSPLMSYFIALQVPSGLV 238 Query: 540 IYWSWSNVISIVQQ 553 +YW+ SN+ I+QQ Sbjct: 239 LYWTVSNLFQILQQ 252 >gi|312623586|ref|YP_004025199.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor kronotskyensis 2002] gi|312204053|gb|ADQ47380.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor kronotskyensis 2002] Length = 341 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 44/254 (17%) Query: 338 WFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W F+A P+ L+ + Y+ + G++GIAI+L T+ V+ L PL KQ ST+ M Sbjct: 5 WLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAIILLTLIVRGLLLPLYIKQIQSTSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P++ E+++K+K + +Q+ M++LY+ NP GCWP+L+QIP+ F++Y V L Sbjct: 65 VAPRLQEIQQKYKNDQKK-MQEEMLKLYQETGYNPAGGCWPLLIQIPILFSLYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDL-AAADPTNI--------------FTLFGI---------LPFYLPGF 487 ++KDL A NI FGI LP F Sbjct: 124 VYVLGKSHQYVKDLITGATGYNITQRIVNEAQKLGLDMHFFGINLAQKELIVLPILSAVF 183 Query: 488 MHVGIWPIIMSLSMFIQMKMSPP-PADKGQAM-------ILNWMPVVFVFALSSFPAGLI 539 + I SM Q K +P + + AM ++ + P++ F P+GL+ Sbjct: 184 SFLSIL-----YSMNSQKKFNPQYSSSQTNAMAEGMNRSLMIFSPLMSYFIALQVPSGLV 238 Query: 540 IYWSWSNVISIVQQ 553 +YW+ SN+ I+QQ Sbjct: 239 LYWTVSNLFQILQQ 252 >gi|213400711|gb|ACJ47004.1| hypothetical protein [Wolbachia endosymbiont of Nasonia vitripennis] Length = 171 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/168 (38%), Positives = 96/168 (57%), Gaps = 4/168 (2%) Query: 222 AVLG--DKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYL 278 VLG D L E Y DI K + S +W G +DKYW + IP K + K+ Sbjct: 3 GVLGAFDNKLEEWTYKDISKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHT 62 Query: 279 -SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 ++ ++Q F + +ILPG S + N+ FAGAK+ + Y+ L IP F+ +D+G Sbjct: 63 NANDIDKFQVDFVKSYKSILPGASTSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFG 122 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + YVS Sbjct: 123 VLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVS 170 >gi|325103807|ref|YP_004273461.1| membrane protein insertase, YidC/Oxa1 family [Pedobacter saltans DSM 12145] gi|324972655|gb|ADY51639.1| membrane protein insertase, YidC/Oxa1 family [Pedobacter saltans DSM 12145] Length = 590 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/231 (28%), Positives = 127/231 (54%), Gaps = 9/231 (3%) Query: 331 EMLIDWGWFYFIAKPMFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 ++ + WG +I + + + + ++F + ++G+ I+L TV +K FP K Y+S A M Sbjct: 318 QVKMGWGPLKWINRYLVLPIFNFFNSFALSYGLIILLLTVILKGALFPFTYKSYLSMAKM 377 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + ++P++DE++ K + +LQ+ ++LYK +NPL GC P+L Q+P A + Sbjct: 378 RVLKPEMDEIKAKVGEDNQALLQQEYLKLYKQAGVNPLGGCLPMLFQMPFILAFFYFFPN 437 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 E+RH F W+ DL+ D F +P L G+ H+ + ++M+ S I + Sbjct: 438 LFELRHESFL-WMTDLSTYDD---IIKFPTIP--LLGWDHISLMCLLMTTSTLIYTYYNN 491 Query: 510 PPAD-KGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ +GQ + ++ P++F L+S+P+GL Y+ +N+++ QQ I + Sbjct: 492 QTSNVQGQMKYIGYITPLIFFGVLNSYPSGLNYYYFCANILTFAQQFFIRR 542 >gi|294101695|ref|YP_003553553.1| membrane protein insertase, YidC/Oxa1 family [Aminobacterium colombiense DSM 12261] gi|293616675|gb|ADE56829.1| membrane protein insertase, YidC/Oxa1 family [Aminobacterium colombiense DSM 12261] Length = 263 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/239 (28%), Positives = 123/239 (51%), Gaps = 24/239 (10%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + +++ +NL G++GIAI+L T+ V++L PL KQ VS M+ +QP++ L+EK+K Sbjct: 12 ILLILETLHNLTGSWGIAIILLTLAVRILLHPLTHKQMVSMQRMQKLQPRMKMLQEKYKD 71 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK-- 463 + L + ++ LYK + +NP AGC P+L+Q+P+ +++++ ++ PF G+I Sbjct: 72 D-KETLNREIMSLYKENKVNPAAGCLPLLVQLPILILLFRLL-MNYNFGSVPFLGFISLE 129 Query: 464 --------DLAAADPTNIFTLFGILPFYL---PGFMHVGIW------PIIMSLSMFIQMK 506 A T + +L L G VG++ +++ + + Q + Sbjct: 130 GSVLSTLAQAVALPETTKIGVMAVLSGVLANPAGLAQVGLYLGNLMLLVVVGILTWAQQQ 189 Query: 507 MSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 MS Q +++W MP+ F S P G+++YW S+ + + QQ I K E+ Sbjct: 190 MS--STGNPQMAMMSWFMPLFLTFICLSLPGGVLLYWGVSSFLGVAQQWWITKKTSQEM 246 >gi|256827813|ref|YP_003151772.1| preprotein translocase subunit YidC [Cryptobacterium curtum DSM 15641] gi|256583956|gb|ACU95090.1| preprotein translocase subunit YidC [Cryptobacterium curtum DSM 15641] Length = 257 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 126/222 (56%), Gaps = 8/222 (3%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F +S+FY+ G++G+AI+ T+ +LL +PL +KQ S+ M+ +QP + E++ K+ Sbjct: 9 IFWCISFFYSFFGDWGMAIVTVTIIFRLLVYPLMQKQIKSSFQMQKVQPLLKEIQTKYAD 68 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---SISLEMRHAPFWGWI 462 Q +Q+ M ++Y NP+AGC PI LQ+P+F A+++V+ + + F+ + Sbjct: 69 D-QQRMQEEMQKIYAEAKFNPIAGCLPIFLQMPIFIALFQVLQEMTTRTQGSTYQFYHLV 127 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN- 521 DL + P++ F G+L F +P + + I+ M +Q + A K Q ++++ Sbjct: 128 PDLTLS-PSSAFGQ-GVLTF-IPYIILLLIFAGATFAPMILQQRGQADSAQKRQTIMMSG 184 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +M + +F + PAG++++W S++ + QQ + M++ E Sbjct: 185 FMSLFMLFIGWTSPAGVLLFWGASSLFGVAQQQITMRVLKRE 226 >gi|213400725|gb|ACJ47011.1| hypothetical protein [Wolbachia endosymbiont of Coptotermes acinaciformis] Length = 171 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 3/171 (1%) Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 EG I D L E Y D+ K I +W G +DKYW + IP K + Sbjct: 1 HEGVIGAF-DNKLEEWTYKDVAKKHLIKTSTSEKNWFGFADKYWLTAIIPEKSDKINVSI 59 Query: 276 KYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 K+ + + ++Q F +ILPG S++ N+ FAGAK+ + Y+ L IP F+ + Sbjct: 60 KHTNVNNIDKFQVDFVKPYKSILPGTSVSNVNYFFAGAKKLNLLDSYKSTLGIPLFDKAV 119 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 D+G YFI KP+F+L+ YF+ ++ NFG+AI+L T+ +KLL L+ + YVS Sbjct: 120 DFGVLYFITKPVFLLLEYFHFVLKNFGLAILLLTLVIKLLMLTLSNRSYVS 170 >gi|213400713|gb|ACJ47005.1| hypothetical protein [Wolbachia endosymbiont of Armadillidium vulgare] Length = 171 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/171 (38%), Positives = 95/171 (55%), Gaps = 3/171 (1%) Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 EG + +K L E Y DI K I SW G +DKYW + I K + Sbjct: 1 HEGVLGAFNNK-LEEWTYKDISKKRLIKTSTSEKSWFGFADKYWFTAIITEKSDKINVSI 59 Query: 276 KYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 KY + + ++QA F ILPG S +T N+ FAGAK+ + Y+ L IP F+ + Sbjct: 60 KYTNVNNIDKFQADFVRPYKHILPGASASTLNYFFAGAKKLNLLDAYKDTLNIPLFDKAV 119 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 D+G YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + Y+S Sbjct: 120 DFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYIS 170 >gi|302393077|ref|YP_003828897.1| membrane protein insertase, YidC/Oxa1 family [Acetohalobium arabaticum DSM 5501] gi|302205154|gb|ADL13832.1| membrane protein insertase, YidC/Oxa1 family [Acetohalobium arabaticum DSM 5501] Length = 224 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 29/208 (13%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + +FY ++G++I+L T+ +++L FPL KQ S M+ +QPK++EL+E++ Q Sbjct: 27 LDFFYGFTNSYGLSIILLTLAIRVLLFPLVAKQTRSMKAMQELQPKMEELKEEYGDDQQQ 86 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 QK M +LY+ H +NP AGC P+L+Q+P+ A++ I ++ F WI ++A D Sbjct: 87 YQQKVM-ELYQEHKVNPAAGCLPLLVQMPILIALFHSIRGFEALKQTSFL-WISNIAQPD 144 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF----IQMKMSPPPADKGQAMILNWMPV 525 + I+ L MF +Q KMS + M+ +MP+ Sbjct: 145 LVLV---------------------ILTGLVMFGQSMVQQKMSGNAGGNNKMMM--FMPL 181 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + V PA +++YW SN++ + QQ Sbjct: 182 LIVVIGFRLPAAVLLYWFTSNLVMVAQQ 209 >gi|282858704|ref|ZP_06267858.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella bivia JCVIHMP010] gi|282588508|gb|EFB93659.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella bivia JCVIHMP010] Length = 641 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 146/619 (23%), Positives = 273/619 (44%), Gaps = 120/619 (19%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI--QTVKQPNQVDNSYAAVLIDDRAQAL 65 FV +AL V+ +AW + P E++ +RK ++ +V N A L ++A+ Sbjct: 9 FVLMAL-VLFGFAW---WQQPSKEQLAQQRKQFVADSIAAAKKVQNEKMASLKAEQAKQA 64 Query: 66 SMSPR--------------VELKNPSLIGSINLKGAQFDDL---NLRGYHL---DVSSNS 105 +++ + LKN + ++N KG N G+++ D S + Sbjct: 65 AIADTTTLFYTALNGQAQDIVLKNDKVALTLNTKGGVVRKAIINNYVGHNIAVKDGSKDQ 124 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT----TPIKLVFK 161 VTL + ++ FA + +NIE + TP+ + + L Sbjct: 125 KYVTLFDGKD-QSLNFA---LAAKQSNIETKDL----------YFTPSNQTDSTVTLTAN 170 Query: 162 NANNILFERTISLDEHYLFKIVDTV---------TNNSI-----DQIRFSPRGRIMRHKP 207 T +L + YL + TNN + D++R RG ++ Sbjct: 171 AGQGKALILTYTLGKDYLLHLSVQAQGMEGLFNPTNNQLEVEWADKVRQQERGFSFENR- 229 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 AT T+ EG L + S EK I+ E+ W+ ++++++V I Sbjct: 230 -YATLTYKKTEGSTDYLNESS---------EKEQIT--EEATDWVAFKNQFFSAVMISKD 277 Query: 268 ETSFHSQFKYL-SDGHARYQAKFSANEITIL--PGKSITTTNFLFAGAKEFPTIHHYE-- 322 S ++ K + D ++ Y ++ AN T GK + F F G +F + E Sbjct: 278 NFSTGAKLKSVPQDKNSGYLKQYEANLKTNFDPSGKKPSEFEFFF-GPNDFRLLQAIESQ 336 Query: 323 ----KDLAIPRFEMLIDWGWFYFIAKPMFMLMS-----YFYNLVGNF---GIAIMLTTVF 370 KDL + R L+ GW P+F +++ Y ++ + GI ++L T+ Sbjct: 337 STFGKDLEMQR---LVYLGW------PLFRIINRWFTIYVFDWLSKLFPMGIVLILITLL 387 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAG 429 +K L +P+ KK Y+S+A M+ ++PK+DE +++ + Q+ Q+AM+Q+Y + ++PL+G Sbjct: 388 LKALTYPMVKKSYMSSAKMRVLKPKLDEATKQYNKPEDQMKKQQAMMQMYSEYGVSPLSG 447 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P+L+Q+P++ A++ + ++++R F W+KDL+ DP IF L ++ G H Sbjct: 448 CLPMLIQMPIWIAMFNFVPNAIQLRGESFL-WMKDLSTFDP--IFEWNHSL--WMIG-DH 501 Query: 490 VGIWPIIMSLSMFI------QMKMSPPPADKGQAM-----ILNWMPVVFVFALSSFPAGL 538 + + I+ + + Q + +G M ++ MP+ F F + + +GL Sbjct: 502 ISLTCILFCAANLLYSWFTMQQQKDQMVGSQGDQMKMMQYMMLGMPLFFFFVFNDYSSGL 561 Query: 539 IIYWSWSNVISIVQQAVIM 557 Y+ +S+ A IM Sbjct: 562 NFYY----FVSLFFSAAIM 576 >gi|312876167|ref|ZP_07736154.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor lactoaceticus 6A] gi|311796982|gb|EFR13324.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor lactoaceticus 6A] Length = 341 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 73/254 (28%), Positives = 123/254 (48%), Gaps = 44/254 (17%) Query: 338 WFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W F+A P+ L+ + Y+ + G++GIA++L T+ V+ L PL KQ ST+ M Sbjct: 5 WLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P++ E+++K+K + +Q+ M++LY+ NP GCWP+L+Q+P+ F++Y V L Sbjct: 65 VAPRLQEIQQKYKNDQRK-MQEEMLKLYQETGYNPAGGCWPLLIQLPILFSLYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDL-AAADPTNI--------------FTLFGI---------LPFYLPGF 487 ++KDL A NI FGI LP F Sbjct: 124 VYVLGKSHQYVKDLITGATGYNITQRIVDEAQKLGLDMHFFGINLAQKELIVLPILSAAF 183 Query: 488 MHVGIWPIIMSLSMFIQMKMSPP-PADKGQAM-------ILNWMPVVFVFALSSFPAGLI 539 + I SM Q K +P + AM ++ + P++ F P+GL+ Sbjct: 184 SFLSIL-----YSMNSQKKFNPQYSQSQSNAMAESINRSLMIFSPLMSYFIALQVPSGLV 238 Query: 540 IYWSWSNVISIVQQ 553 +YW+ +N+ +I+QQ Sbjct: 239 LYWTVTNLFTILQQ 252 >gi|317503117|ref|ZP_07961189.1| inner membrane protein OxaA [Prevotella salivae DSM 15606] gi|315665767|gb|EFV05362.1| inner membrane protein OxaA [Prevotella salivae DSM 15606] Length = 644 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 150/610 (24%), Positives = 280/610 (45%), Gaps = 99/610 (16%) Query: 8 FVAIALSVIIVYAWQN---------FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 F+ IA +V+I ++W N +V IE++N + + N+ + ++ Sbjct: 9 FLLIA-AVLIGFSWYNQPSAEEQRAAFVKDSIEQVNKSQSEKAAQMEKNKRQQAEKQKVL 67 Query: 59 DDRA----QALSMS-PRVELKNPSLIGSINLKGAQFDDLNLRGY---HLDV---SSNSPI 107 D +AL+ + R+ LKN + + + KGA + ++GY ++ V S++ Sbjct: 68 SDTTSLFHKALTGNVERIVLKNKKVELTFSSKGAYVEQAVIKGYVGHNIKVKNGSADKKN 127 Query: 108 VTLLSPSNTKNAYF--AELDYVSTANNIELPN--SNTVWNLIS----GKILTPTTPIKLV 159 +TL S ++ +Y A+ ++TA +P+ S++ I+ GK LT L Sbjct: 128 LTLFSGADQSISYLLNAKETNINTAELYFVPSEVSDSTVTFIADAGEGKSLT------LK 181 Query: 160 FKNANNILFERTISLDEHY-LFK-IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 ++ + + +S+ LF T+ N D+ R RG ++ AT T+ + Sbjct: 182 YELGRDYMLHMQMSVQGMAGLFAPGTQTMDVNWKDKARQQERGFSFENR--YATLTYHKK 239 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 +G G L E K +I+KS E W+ ++++++V I + +F S Sbjct: 240 DG-----GTDYLNETK-EEIDKS----IEEQIDWVAFKNQFFSAVMIA--KNNFQSNALM 287 Query: 278 LS---DGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHHYEK------DLA 326 S + + Y ++ A T GK + F + G +F + EK DL Sbjct: 288 TSIPQEKGSGYLKQYEAKMKTFFDPTGKKASEFEFYY-GPNDFRLLQKMEKESQFHKDLQ 346 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFP 377 + R L+ GW P+F +++ ++ L N GI ++L T+ +KLL +P Sbjct: 347 MQR---LVYLGW------PLFRIINRWFTLYVFDFLTSMNINMGIVLILITLLLKLLTYP 397 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQ 436 + KK Y+S+A M+ ++PK+DE ++F + Q+ Q+AM+ Y + ++PL+GC P+L+Q Sbjct: 398 MVKKSYMSSAKMRVLKPKLDEATKQFDKPEDQMQKQQAMMAEYAKYGVSPLSGCLPMLIQ 457 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVG 491 P++ A++ + ++++R F WIKDL+ DP N++ + L F Sbjct: 458 APIWIAMFNFVPNAIQLRGESFL-WIKDLSTYDPIWEWNHNLWLIGDHLSLTCILFCVAN 516 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNV 547 + +M++ Q K Q ++ W MP++F F + + AGL Y+ Sbjct: 517 VLYTMMTMR---QQKDQMVGQQADQMKMMQWMMFLMPIMFFFMFNDYSAGLNFYY----F 569 Query: 548 ISIVQQAVIM 557 +S+ A IM Sbjct: 570 VSLFFSAAIM 579 >gi|295707340|ref|YP_003600415.1| membrane protein OxaA [Bacillus megaterium DSM 319] gi|294804999|gb|ADF42065.1| membrane protein OxaA [Bacillus megaterium DSM 319] Length = 254 Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 121/221 (54%), Gaps = 27/221 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++ P+ ++++Y + ++G+AI++ T+ ++LL PL KQ +T M+ +QP++ Sbjct: 36 WNEYVVYPLSLVITYLAEVFKSYGVAIIVVTILIRLLILPLMIKQMRNTKAMQTLQPEMQ 95 Query: 398 ELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +L+EK+ Q LQK + L++T+ +NPLAGC+PIL+Q+P+ I+ I+ + E+ Sbjct: 96 KLKEKYSSKDAQTQQQLQKETMALFQTYGVNPLAGCFPILIQMPILIGIFHAITRTSEIA 155 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPP 511 + F W DL A DP LF I PI+ ++ FIQ KM Sbjct: 156 NNSFL-WF-DLGARDP-----LF--------------ILPIVAGITTFIQQKMMMAGNAN 194 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + AM+L MP++ V +FPA L +YW N+ I+Q Sbjct: 195 QNPQMAMMLWVMPIMIVVFAINFPAALSLYWVVGNLFMIIQ 235 >gi|156741411|ref|YP_001431540.1| 60 kDa inner membrane insertion protein [Roseiflexus castenholzii DSM 13941] gi|156232739|gb|ABU57522.1| 60 kDa inner membrane insertion protein [Roseiflexus castenholzii DSM 13941] Length = 345 Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 55/254 (21%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W F+ +L++ FY G+ G+AI+L T+ +LL PL K S+ M+ +QP + Sbjct: 4 WLAFVEFLQQVLLT-FYAWTGSAGLAIILFTIVARLLILPLTIKSLQSSRKMQELQPHMK 62 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 EL+ K+ + P Q LQ+ ++LY+ + +NP+ GC P+LLQ+P+F +Y+ + + A Sbjct: 63 ELQRKYGKDP-QKLQEETMRLYREYKVNPVGGCLPMLLQLPIFLGVYQAVINLTRVSPAE 121 Query: 458 FWG--------------------------------WIKDLAAADPTNIFTLFGILPFYLP 485 G W+ DL DP I + ++ Sbjct: 122 HAGSAMLRVLNEQGIAFSTATTATLGQPQLAGSFLWLPDLGKTDPYYILPILSVI----- 176 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYW 542 + +Q+ +P D Q ++ M P+VF + FP+G ++YW Sbjct: 177 -------------FQLIVQLMATPRIQDPQQKAMMQSMLILPIVFGYIGFIFPSGAVLYW 223 Query: 543 SWSNVISIVQQAVI 556 +++SI+QQ VI Sbjct: 224 VVGSILSIIQQYVI 237 >gi|303274404|ref|XP_003056523.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] gi|226462607|gb|EEH59899.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] Length = 511 Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 123/230 (53%), Gaps = 22/230 (9%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 G +I+ TT VK L +P K Q S NM+N+QP+++ +REK++ Q + + +LY Sbjct: 147 LGSSIIFTTFVVKALTYPFTKVQVESALNMQNLQPQVNAVREKYRDDQEQ-MNIEINRLY 205 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 + + ++PLAGC P+LL +PV + +Y+ + S++ W +I LA PT +L Sbjct: 206 EDNQVSPLAGCGPLLLTLPVVWGLYRAFNNASIDGSFDEPWFFIPSLAG--PTPDRSLAW 263 Query: 479 ILPF---YLP--GFMHVGIW---PIIMSLSMFIQMKMSPPPAD---------KGQAMILN 521 +LP Y P G+ ++ PI+ S ++ M + P D + Q+ +LN Sbjct: 264 LLPLDDNYQPPLGWHDASLYLVVPILTVASQYVSMSILSPVKDLNDPNTAETEQQSFLLN 323 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 ++P+ + + PAGL +YW ++N+ + Q V ++ G + +++++ Sbjct: 324 FLPLFIGYISLTVPAGLTLYWLFNNIFTTATQ-VYLRQGGGAVAKVEKIK 372 >gi|88607139|ref|YP_505134.1| hypothetical protein APH_0541 [Anaplasma phagocytophilum HZ] gi|88598202|gb|ABD43672.1| putative membrane protein [Anaplasma phagocytophilum HZ] Length = 122 Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 47/117 (40%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 GAKE + Y+ L IP F+ +D+G YFI KP+F+L+ YF+ L+GNFG+AI++ TV Sbjct: 2 GAKELELLDQYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQYFHKLLGNFGLAIVMLTVA 61 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 +KL+ FPL+ + YVS +K +QP++ ++E +K ++ K + L+K H ++P+ Sbjct: 62 IKLVAFPLSMRSYVSMFKLKRLQPEVLRIKELYKTDDLRI-SKEIASLFKKHKVSPV 117 >gi|257127031|ref|YP_003165145.1| hypothetical protein Lebu_2303 [Leptotrichia buccalis C-1013-b] gi|257050970|gb|ACV40154.1| 60 kDa inner membrane insertion protein [Leptotrichia buccalis C-1013-b] Length = 228 Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 117/210 (55%), Gaps = 21/210 (10%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +VGN+GIAI++ T ++++ FPL KQ S M+++QP++++++EK K + PQ LQ+ Sbjct: 20 GVVGNYGIAIIIVTFLMRIIVFPLTLKQEKSMKKMRDLQPELEKIKEKHKDN-PQELQRR 78 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI- 473 ++YK + +NPL GC P+L+Q+P+F A+Y + +I D AD + Sbjct: 79 TAEIYKENGVNPLGGCLPLLIQMPIFVALY--------------YAFIGDAIPADAKFLW 124 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-----SPPPADKGQAMILNWMPVVFV 528 FTL ++ G + PI+ FIQ K+ S ++ +L MP++ + Sbjct: 125 FTLKQPDRLFMLGKFAFNLLPILNVGVTFIQQKIMTSATSGQETNQQMQSMLYMMPLMML 184 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F + P+G+ +Y+ S +S+VQQ I+K Sbjct: 185 FIFYNMPSGVTLYYLVSGALSLVQQYFILK 214 >gi|294501989|ref|YP_003565689.1| membrane protein OxaA [Bacillus megaterium QM B1551] gi|294351926|gb|ADE72255.1| membrane protein OxaA [Bacillus megaterium QM B1551] Length = 254 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 121/221 (54%), Gaps = 27/221 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++ P+ ++++Y + ++G+AI++ T+ ++LL PL KQ +T M+ +QP++ Sbjct: 36 WNEYVVYPLSLVITYLAEVFKSYGVAIIVVTILIRLLILPLMIKQMRNTKAMQTLQPEMQ 95 Query: 398 ELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +L+EK+ Q LQK + L++T+ +NPLAGC+PIL+Q+P+ I+ I+ + E+ Sbjct: 96 KLKEKYSSKDAQTQQQLQKETMALFQTYGVNPLAGCFPILIQMPILIGIFHAITRTSEIA 155 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPP 511 + F W DL A DP LF I P++ ++ FIQ KM Sbjct: 156 NNSFL-WF-DLGARDP-----LF--------------ILPVVAGITTFIQQKMMMAGNAN 194 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + AM+L MP++ V +FPA L +YW N+ I+Q Sbjct: 195 QNPQMAMMLWVMPIMIVVFAINFPAALSLYWVVGNLFMIIQ 235 >gi|188587521|ref|YP_001919066.1| 60 kDa inner membrane insertion protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352208|gb|ACB86478.1| 60 kDa inner membrane insertion protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 213 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 120/216 (55%), Gaps = 33/216 (15%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++S+FY L G++G+AI++ T+ V+ L FPL KQ ST M+ +QP++ +L+EK+K Sbjct: 12 ILSFFYELTGSYGLAIVILTIGVRALTFPLMAKQMQSTNKMQELQPELKKLQEKYKDD-K 70 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK----- 463 + L K ++L+K H +NP AGC P+++Q+PV A+++++ + F G + Sbjct: 71 ETLNKKTMELWKKHKVNPAAGCLPLIVQMPVLIAMFRLLR-----DYQQFLGDVDPVFLG 125 Query: 464 -DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ +D PF+ I PI+ + F+Q K++ + + ++ Sbjct: 126 IDLSQSD-----------PFF--------ILPILAGGTTFLQQKLT--MTSQSNSSMMMI 164 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MP + +F S+ PAGL +Y+ N+ S++ V+ K Sbjct: 165 MPFMIIFISSTLPAGLPLYFVVGNIFSLIAHLVMKK 200 >gi|312136222|ref|YP_004003560.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor owensensis OL] gi|311776273|gb|ADQ05760.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor owensensis OL] Length = 341 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 72/249 (28%), Positives = 124/249 (49%), Gaps = 34/249 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WF F+A P+ L+ Y+ + G++GIA++L T+ V+ L PL KQ S + M Sbjct: 5 WFDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIHSMSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P++ E+++K+K + LQ+ M++LY+ NP AGCWP+L+Q+P+ F++Y V L Sbjct: 65 VAPRLQEIQQKYKNDQKK-LQEEMLKLYQETGYNPAAGCWPLLIQMPILFSLYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MH-VGI---------WPIIMSLS 500 ++KDL T + G MH +GI PI+ + + Sbjct: 124 VYVLGKSHQYVKDLVTGATGYAITQRIVDEAQKLGLDMHFLGINLAKKELLVLPILSAAT 183 Query: 501 MFI--------QMKMSPP-PADKGQAM-------ILNWMPVVFVFALSSFPAGLIIYWSW 544 M + Q K +P + AM + + P++ F P+GL++YW+ Sbjct: 184 MLLSVWFSSNSQKKFNPQYSQSQSNAMAESINKSFMIFSPLMSYFIALQVPSGLVLYWTV 243 Query: 545 SNVISIVQQ 553 +N+ +I+QQ Sbjct: 244 TNLFTILQQ 252 >gi|332800544|ref|YP_004462043.1| membrane protein insertase, YidC/Oxa1 family [Tepidanaerobacter sp. Re1] gi|332698279|gb|AEE92736.1| membrane protein insertase, YidC/Oxa1 family [Tepidanaerobacter sp. Re1] Length = 209 Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 23/216 (10%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ M LM + ++GIAI+L TV +KL+ P + Q S M+ I P EL+ Sbjct: 3 FLQDLMKQLMDLIFVYTNSYGIAIILLTVLIKLILLPFSFMQINSMKKMQEITPLQQELQ 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 +K+K + L +++LY+ + INP+ GC P+L+Q PV A+++V + + A F Sbjct: 63 KKYKNDKEK-LNMEIMKLYQENKINPMGGCLPLLIQFPVIIALFRVFQ-TYDFAGASFL- 119 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI +L+ D T I PI+ +++ +IQ K+S P AD A + Sbjct: 120 WISNLSKPDSTFIL-------------------PILAAVTTYIQTKLSTPAGADNPNASM 160 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 MP++ + F AGL +YW SNV+ IVQQ + Sbjct: 161 NIIMPLMIGWFSVKFAAGLALYWVVSNVVQIVQQLI 196 >gi|315644292|ref|ZP_07897462.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus vortex V453] gi|315280667|gb|EFU43956.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus vortex V453] Length = 296 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 111/201 (55%), Gaps = 30/201 (14%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G +G+++++ + V+ L PL KQ S+ M+ IQP+I ++REK+K P +V Q ++ Sbjct: 67 GEYGLSVLVMVLIVRTLILPLTLKQVRSSKAMQAIQPEIQKIREKYKDQPEKV-QMETMK 125 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR-HAPFWGWIKDLAAADPTNIFTL 476 L++ + +NP+AGC P+++Q+P+F A+Y I + +R H W L P +F L Sbjct: 126 LFQENKVNPMAGCLPLIVQMPIFIALYHSIYYNNLLRDHEFLW-----LQLGQPDKLFIL 180 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQ----MKMSPPPADKGQAMILNWMPVVFVFALS 532 P++ +++ ++Q MKM+P P +L P++ +F +S Sbjct: 181 -----------------PVLAAITTYLQTKMMMKMNPSPQMGMMQFMLFVYPIL-IFVMS 222 Query: 533 -SFPAGLIIYWSWSNVISIVQ 552 FP+ L +YW +SN+ +IVQ Sbjct: 223 FQFPSALPLYWFYSNLYTIVQ 243 >gi|325282064|ref|YP_004254606.1| Membrane protein oxaA [Odoribacter splanchnicus DSM 20712] gi|324313873|gb|ADY34426.1| Membrane protein oxaA [Odoribacter splanchnicus DSM 20712] Length = 616 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 93/327 (28%), Positives = 168/327 (51%), Gaps = 38/327 (11%) Query: 251 WLGISDKYWASVFIPSK-------ETSFHSQFKYLSDGHARYQAKF--SANEITILPGKS 301 W+ ++++S+ I + +++ + YL D +A + SANE + Sbjct: 265 WIDFKQQFFSSILISEQPLSDVELKSNISKKDGYLKDAYAEIPLAYNGSANEQYNMQ--- 321 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF-----YFIAKPMFMLMSYFYNL 356 F G + + Y L +P + + W W YF+ P+F + L Sbjct: 322 ------FFFGPNSYKVLKEYGDHLDLPDV-INMGWKWIAWFNKYFVI-PIFNFLENHTAL 373 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 N+GI I+L T+ +K++ FPL K Y+S A M+ ++P++DE+ +K+ Q+A + Sbjct: 374 --NYGIIILLLTLIIKIILFPLTYKSYMSQARMRVLKPQVDEIAKKYPADKAMERQQATM 431 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK +NP+ GC P+L+Q+P+ A++ ++E+R F W DLA+ D +I TL Sbjct: 432 KLYKQAGVNPMGGCLPMLIQMPILIALFYFFPGAIELRQQSFL-WATDLASYD--SIATL 488 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPAD--KGQAMILNWMPVVFVFAL 531 +PFY HV ++ ++M+ + I M M + P D KG ++ MP++F+F Sbjct: 489 PFTIPFYGN---HVSLFCLLMTATNIIYMIMNNKNQPQNDQMKGMQTMMYIMPIMFLFIF 545 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 +S+ +GL Y+ + +I+I+Q +I K Sbjct: 546 NSYSSGLSYYYFIATLITILQTWIIRK 572 >gi|150392475|ref|YP_001322524.1| 60 kDa inner membrane insertion protein [Alkaliphilus metalliredigens QYMF] gi|149952337|gb|ABR50865.1| 60 kDa inner membrane insertion protein [Alkaliphilus metalliredigens QYMF] Length = 220 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 115/225 (51%), Gaps = 28/225 (12%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F A+P+ L+ ++L+GN+G++I++ T+ VKLL PL KQ S M+ +QP+I +L+ Sbjct: 3 FFAQPLGALLKLIFDLIGNYGVSIIVFTILVKLLLLPLTLKQTRSMRQMQEVQPEIKKLQ 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---------SISL 451 EK+K Q+ K M ++Y +N++P GC P+L+Q P+ ++ + S + Sbjct: 63 EKYKNDKEQLNAKTM-EIYAKYNVSPFGGCLPLLVQFPILIGLFTALRDPATYVFGSAEI 121 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 + W+ +L+ ADP + L GI F M G Sbjct: 122 YASINTSFLWLSNLSDADPWVLPLLAGITTFLSSKTMSTG------------------KQ 163 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 AD+ Q M+ MP++ + SFPAGL +YW SN+ VQQ ++ Sbjct: 164 ADQTQKMMTYGMPLMIFWWGRSFPAGLTLYWVVSNLFQFVQQLLM 208 >gi|625665|pir||C36925 cbbR 3'-region hypothetical protein - Xanthobacter flavus (fragment) Length = 106 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 42/89 (47%), Positives = 65/89 (73%) Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 ++ +G WP+IM ++M++QMK++P P D Q MI NWMP++F F L+ F AGL+IYW+W+N Sbjct: 9 YLLLGAWPLIMGVTMWVQMKLNPAPPDPTQQMIFNWMPIIFTFMLAHFAAGLVIYWAWNN 68 Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 +S+ QQAVIM+ +G +I L D ++ Sbjct: 69 TLSVTQQAVIMRRNGVKIELWDNIKGALG 97 >gi|312794741|ref|YP_004027664.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181881|gb|ADQ42051.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor kristjanssonii 177R1B] Length = 341 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 44/254 (17%) Query: 338 WFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W F+A P+ L+ + Y+ + G++GIA++L T+ V+ L PL KQ ST+ M Sbjct: 5 WLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P++ E+++K+K + +Q+ M++LY+ NP GCWP+L+Q P+ FA+Y V L Sbjct: 65 VAPRLQEIQQKYKNDQRK-MQEEMLKLYQETGYNPAGGCWPLLIQAPILFALYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDLAAADPTNIFT---------------LFGI---------LPFYLPGF 487 +++DL T FGI LP F Sbjct: 124 VYVLGKSHQYVRDLITGATGYAITQRIVDEAQKLGLDMHFFGINLAQKELIVLPILSAAF 183 Query: 488 MHVGIWPIIMSLSMFIQMKMSPP-PADKGQAM-------ILNWMPVVFVFALSSFPAGLI 539 + I SM Q K +P + AM ++ + P++ F P+GL+ Sbjct: 184 SFLSIL-----YSMNSQKKFNPQYSQSQSNAMAESMNRSLMIFSPLMSYFIALQVPSGLV 238 Query: 540 IYWSWSNVISIVQQ 553 +YW+ SN+ I+QQ Sbjct: 239 LYWTVSNLFQILQQ 252 >gi|297627570|ref|YP_003689333.1| hypothetical protein PFREUD_24190 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923335|emb|CBL57936.1| Conserved membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 355 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 126/232 (54%), Gaps = 24/232 (10%) Query: 349 LMSYFYNLVGNFG--IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 L S+F N +AI+L T F++LL PL KQ S+ M++IQPK++EL++K+ Sbjct: 32 LFSFFMNPDSGLTWTLAIVLLTCFIRLLMMPLYAKQLNSSRAMQSIQPKVEELQKKYGSD 91 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD-- 464 ++ Q+ M +LY +NP + C P+L+Q+P+F+A+++V+S + R+ + W++ Sbjct: 92 RERLGQETM-KLYNEEGVNPASSCLPLLIQLPIFWALFRVLSSAASDRNVHGY-WLQRSP 149 Query: 465 --LAAADPTNIF--TLFGILPFYLPGFMHVGIW----PIIMSLSMFIQM-----KMSPPP 511 A+ ++F L G GF + I+M+ MF+Q + PP Sbjct: 150 EITASLSHADLFGAKLSGTFWPLTGGFGATQGFALALAILMTGLMFVQQLHMLKRNMPPA 209 Query: 512 ADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 A G Q M+L P++++F + P G+++YW +N+ ++ QQ VI++ Sbjct: 210 AQTGPMAQQQKMMLYMFPLMYLFGGMAMPIGVLLYWLATNIWTMAQQYVIIR 261 >gi|224023372|ref|ZP_03641738.1| hypothetical protein BACCOPRO_00065 [Bacteroides coprophilus DSM 18228] gi|224016594|gb|EEF74606.1| hypothetical protein BACCOPRO_00065 [Bacteroides coprophilus DSM 18228] Length = 617 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 84/331 (25%), Positives = 152/331 (45%), Gaps = 35/331 (10%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W+ ++Y++ VFI + + + + Y + A+ T +NF F Sbjct: 250 WVAFKNQYFSCVFIAEQNFEKATLESKMEQKGSGYMKNYQADMQTAFDPTGAKPSNFQFY 309 Query: 311 -GAKEFPTI------HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY--NLVG--- 358 G F T+ +KDL + E L+ GW P+ L++ ++ NL Sbjct: 310 FGPNHFKTLLASNDLSFKDKDLEL---EDLVYLGW------PIIRLINRWFTINLFDWLS 360 Query: 359 ----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQK 413 + G+ I+L T+ VK+L P K ++S+A M+ ++P +D++ K+ KQ Q+ Sbjct: 361 SWGLSMGMVILLMTIIVKILVLPTTWKSFISSAKMRALKPYVDKINAKYPKQEDALKKQQ 420 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD---- 469 + LY + ++P+ GC P+LLQ PVF A++ + ++E+R F W DL++ D Sbjct: 421 ETMALYSQYGVSPMGGCLPMLLQTPVFMALFFFVPNAIELRQQSFL-WASDLSSYDDLIS 479 Query: 470 -PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 T+I L L + F +I + M Q M P ++ MP++F Sbjct: 480 WSTSIPLLGNHLSLFCLLFSAT---TVINQIVMMKQQDMGNNPQMAAMKWMMYIMPLMFF 536 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 F + + +GL Y+ S +I I+ ++ +M Sbjct: 537 FIFNEYASGLSYYYFISGLIGILTMWIMRRM 567 >gi|312128801|ref|YP_003993675.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor hydrothermalis 108] gi|311778820|gb|ADQ08306.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor hydrothermalis 108] Length = 341 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/254 (28%), Positives = 121/254 (47%), Gaps = 44/254 (17%) Query: 338 WFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W F+A P+ L+ Y+ + G++GIA++L T+ V+ L PL KQ ST+ M Sbjct: 5 WLDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P++ E+++K+K + +Q+ M++LY+ NP GCWP+L+Q+P+ F++Y V L Sbjct: 65 VAPRLQEIQQKYKNDQKK-MQEEMLKLYQETGYNPAGGCWPLLIQLPILFSLYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDL-AAADPTNI--------------FTLFGI---------LPFYLPGF 487 ++KDL A NI FGI LP F Sbjct: 124 VYVLGKSHQYVKDLITGATGYNITQRIVDEAQKLGLDMHFFGINLAQKELIVLPILSAAF 183 Query: 488 MHVGIWPIIMSLSMFIQMKMSP--------PPADKGQAMILNWMPVVFVFALSSFPAGLI 539 + I SM Q K +P A+ ++ + P++ F P+GL+ Sbjct: 184 SFLSIL-----YSMNSQKKFNPQYSQSQSNAMAESMNKSLMIFSPLMSYFIALQVPSGLV 238 Query: 540 IYWSWSNVISIVQQ 553 +YW+ +N+ +I+QQ Sbjct: 239 LYWTVTNLFTILQQ 252 >gi|34540342|ref|NP_904821.1| putative inner membrane protein translocase component YidC [Porphyromonas gingivalis W83] gi|38502879|sp|P60036|OXAA_PORGI RecName: Full=Inner membrane protein oxaA gi|34396654|gb|AAQ65720.1| membrane protein, putative [Porphyromonas gingivalis W83] Length = 627 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 91/338 (26%), Positives = 165/338 (48%), Gaps = 22/338 (6%) Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + SD ++ E W+ DKY+ASV + + + + + Y + + Sbjct: 242 RLSDSKQEDKKTLEEPLHWVSFKDKYFASVLVCDSYFENNKLAQKTAAAGSDYLKNCTMS 301 Query: 293 EITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGW--FYFIAKPM 346 L +S T F F G ++ + Y+K + + L+ G F +I + M Sbjct: 302 ATFPLDVRSGTKARFTFFFGPLKYNMLRAYDKGMKAEDNLDLDHLVYLGASIFRWINRYM 361 Query: 347 FMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-- 403 + S F N+G+ I+L T+ +KLL PLA K Y+S+A M+ ++P++ E+ K+ Sbjct: 362 IIPASTFLQQYFSNWGLIILLLTLGIKLLISPLAYKGYLSSAKMRLLRPQVQEINAKYPG 421 Query: 404 -KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q Q A + LY+ P++GC P+LLQ P A+Y ++++R F W Sbjct: 422 KDQESMMKRQSATMNLYRAAGAGPMSGCLPMLLQFPFLIAMYMYFPTTIDIRQQSFL-WA 480 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKGQA--M 518 +DL++ D +F+ +P L F HV ++ ++MS+S + ++ + +D GQ Sbjct: 481 EDLSSYDA--VFSWTADIPL-LSQFYGNHVSLFCLLMSISNILYIRYTMNQSDTGQEGMA 537 Query: 519 ILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +L WMP V+F+F + +GL Y+ S++I+++Q Sbjct: 538 MLKWMPYITTVMFLFFFNQNASGLCYYYFLSSIITVIQ 575 >gi|225424558|ref|XP_002282031.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296081405|emb|CBI16838.3| unnamed protein product [Vitis vinifera] Length = 539 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 116/225 (51%), Gaps = 24/225 (10%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L TV VK FPL KKQ S M+++QP+I +++++ ++ Q +LY Sbjct: 119 YGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQRYAGDQERI-QLETARLY 177 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 K INPLAGC P L IPV+ +Y+ +S ++ E + WI L+ PT I Sbjct: 178 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLSG--PTTIAARQN 235 Query: 479 ------ILPFYLPGFMHVG--------IWPIIMSLSMFI-----QMKMSPPPADKGQAMI 519 + PF + G +G + P+++ +S +I Q S P+ K + Sbjct: 236 GSGISWLFPF-VDGHPPLGWSDTLAYLVLPMLLIVSQYISVQIMQSSQSNDPSLKTSQAL 294 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 ++P++ + S P+GL +YW +N++S QQ + K+ GA+I Sbjct: 295 TKFLPLMIGYFALSVPSGLSLYWFTNNILSTAQQVWLQKLGGAQI 339 >gi|9886727|emb|CAC04249.1| PPF-1 protein [Pisum sativum] Length = 442 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 76/255 (29%), Positives = 128/255 (50%), Gaps = 30/255 (11%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + GWF FI+ M ++ + + +G AI+L T VK PL K+Q ST Sbjct: 87 NGGWFGFISDGMEFVLKVLKGGLSSVHVPYSYGFAIILLTGIVKAATLPLTKQQVESTLA 146 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+N QPKI ++E++ + ++ Q +LY +NPLAGC P L IPV+ +Y+ +S Sbjct: 147 MQNPQPKIKAIQERYAGNQERI-QLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALS 205 Query: 449 -ISLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVG--------IW 493 ++ E + WI L PT+I + + PF + G +G + Sbjct: 206 NVANEGLLTEGFLWIPSLGG--PTSIAARQSGSGISWLFPF-VDGHPPLGWYDTAAYLVL 262 Query: 494 PIIMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 P+++ +S ++ M+ M PP P K +I ++P++ + S P+GL IYW +NV+ Sbjct: 263 PVLLIVSQYVSMEIMKPPQTNDPNQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVL 322 Query: 549 SIVQQAVIMKMHGAE 563 S + + K+ GA+ Sbjct: 323 STAHKVWLRKLGGAK 337 >gi|157694477|ref|YP_001488939.1| OxaA-like protein precursor [Bacillus pumilus SAFR-032] gi|157683235|gb|ABV64379.1| stage III sporulation protein J [Bacillus pumilus SAFR-032] Length = 263 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 79/226 (34%), Positives = 123/226 (54%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L++Y NL G N+G+AI++ T+ ++LL PL KQ ST M+ +QP++ Sbjct: 41 WNSYIVYPLSQLITYMANLTGENYGVAIIIVTLLIRLLILPLMIKQLRSTKAMQALQPEL 100 Query: 397 DELREKFKQSPPQVLQKAMIQ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ + Q+ + L++ + +NPLAGC+PIL+Q+P+ Y I + E+ Sbjct: 101 KKLREKYSSKDQKTQQQLQQETMALFQKNGVNPLAGCFPILIQMPILIGFYHAIMRTAEI 160 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSPPP 511 + F W DL + DP +F L PII ++ FIQ K M+ P Sbjct: 161 KKHTFL-WF-DLGSPDP--LFLL-----------------PIIAGVATFIQQKLMMAGNP 199 Query: 512 ADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +D Q I+ W MP++ + SFPA L +YW N+ I+Q VI Sbjct: 200 SDNPQMAIMLWVMPIMIIVFAISFPAALSLYWVVGNIFMIIQTLVI 245 >gi|258646360|ref|ZP_05733829.1| stage III sporulation protein J [Dialister invisus DSM 15470] gi|260403758|gb|EEW97305.1| stage III sporulation protein J [Dialister invisus DSM 15470] Length = 306 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 111/202 (54%), Gaps = 23/202 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+ IAI++ T+ +K L PLA KQ S M+ IQP+I ++++K++ P ++++ M +L Sbjct: 46 NYVIAIVVLTILIKTLLLPLAVKQIRSMKAMQAIQPEIQKIQKKYRNDP-AMMRQEMGRL 104 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 YK HN +P+AGC P+L+Q+P A+Y I S + HA F WI+ LAA D T I Sbjct: 105 YKEHNASPMAGCLPLLIQMPFLIAMYYAIQGFSYDPLHAGFL-WIESLAAEDGTYIL--- 160 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMF-IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 P++ + S F + + +P A Q +L MP++ + FP+ Sbjct: 161 ----------------PVLSAASTFLVSWQTTPKDAPGNQKTMLFMMPLMIGWMSLHFPS 204 Query: 537 GLIIYWSWSNVISIVQQAVIMK 558 GL+IYW SN+ QQ ++ + Sbjct: 205 GLVIYWVVSNIYQFFQQLIMFR 226 >gi|238018226|ref|ZP_04598652.1| hypothetical protein VEIDISOL_00050 [Veillonella dispar ATCC 17748] gi|237864697|gb|EEP65987.1| hypothetical protein VEIDISOL_00050 [Veillonella dispar ATCC 17748] Length = 222 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/230 (32%), Positives = 117/230 (50%), Gaps = 31/230 (13%) Query: 339 FYFIAKPMFMLMSYFYNL---VG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F+ I + M L++Y + L VG ++G+AI+L T+ +K + PL KQ S M+ +Q Sbjct: 8 FHPIVELMTTLVTYAFQLTQMVGYPSYGVAIILLTIVIKAILAPLTVKQIKSMKAMQELQ 67 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI-YKVISISLE 452 P++ EL++K+K P + LQ M LYK +NPLAGC P+L+Q+P AI Y + + Sbjct: 68 PRMKELQDKYKNDPAK-LQAEMGALYKEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYD 126 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + F W+ L DP I P++ + S +I K + A Sbjct: 127 QNYVQFL-WLPSLGEPDPMYIL-------------------PVLSAASTWIMSKQTSSGA 166 Query: 513 D----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + Q ++ +MP+ + +FP+GL+IYW SNV VQQ I K Sbjct: 167 SGAAAQQQKIMTIFMPLFIGYISLNFPSGLVIYWIVSNVFQFVQQHFIYK 216 >gi|194016614|ref|ZP_03055228.1| membrane protein OxaA 1 [Bacillus pumilus ATCC 7061] gi|194012087|gb|EDW21655.1| membrane protein OxaA 1 [Bacillus pumilus ATCC 7061] Length = 259 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 79/226 (34%), Positives = 123/226 (54%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L++Y NL G N+G+AI++ T+ ++LL PL KQ ST M+ +QP++ Sbjct: 37 WNSYIVYPLSQLITYMANLTGENYGVAIIIVTLLIRLLILPLMIKQLRSTKAMQALQPEL 96 Query: 397 DELREKFKQSPPQVLQKAMIQ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ + Q+ + L++ + +NPLAGC+PIL+Q+P+ Y I + E+ Sbjct: 97 KKLREKYSSKDQKTQQQLQQETMALFQKNGVNPLAGCFPILIQMPILIGFYHAIMRTAEI 156 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSPPP 511 + F W DL + DP +F L PII ++ FIQ K M+ P Sbjct: 157 KKHTFL-WF-DLGSPDP--LFLL-----------------PIIAGVATFIQQKLMMAGNP 195 Query: 512 ADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +D Q I+ W MP++ + SFPA L +YW N+ I+Q VI Sbjct: 196 SDNPQMAIMLWVMPIMIIVFAISFPAALSLYWVVGNIFMIIQTLVI 241 >gi|224001688|ref|XP_002290516.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973938|gb|EED92268.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 446 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 126/240 (52%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFG-------IAIMLTTVFVKLLFFPLAKKQYVSTANM 389 GWF F+ P+ L+ + + + G I+I+ TV +K L FPL K Q ST M Sbjct: 110 GWFGFLTLPIEGLLKLIHGGLDSMGMSSNAWGISIIAMTVVIKALTFPLTKSQLESTNKM 169 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP I L+ K+ QS P+V+ + + ++Y+T+ +NPLAGC P L+QIPVF +Y+ + + Sbjct: 170 QALQPTIKSLQAKY-QSNPEVMNQKIAEVYQTNEVNPLAGCIPSLVQIPVFIGLYRAV-L 227 Query: 450 SLEMRHA---PFWGWIKDLA----AADPTNIFT-LFGILPFYLPG--------FMHVGIW 493 +L +A PF ++ +L ADP + LF +PG F+ + Sbjct: 228 NLAKENALDEPFL-FLPNLEGPTYGADPAHGSDWLFKNWVDGVPGLGWEDTIAFLSI--- 283 Query: 494 PIIMSLSMFIQMKMSPPPADKGQA----MILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 P+ +++S I M M P D Q +IL +P + + + PA L +YW +N+++ Sbjct: 284 PVFLTISQVISMNMMQPKTDDPQQQQANVILKVLPFMIGWFALNVPAALGVYWVVNNIVT 343 >gi|313893458|ref|ZP_07827028.1| stage III sporulation protein J [Veillonella sp. oral taxon 158 str. F0412] gi|313441901|gb|EFR60323.1| stage III sporulation protein J [Veillonella sp. oral taxon 158 str. F0412] Length = 222 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 28/211 (13%) Query: 355 NLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +VG ++G+AI+L T+F+K + PL KQ S M+ +QP++ EL+ K+K P + LQ Sbjct: 27 QMVGYPSYGVAIILLTIFIKAILAPLTVKQIKSMKAMQELQPRMQELQNKYKNDPAR-LQ 85 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAI-YKVISISLEMRHAPFWGWIKDLAAADPT 471 M LYK +NPLAGC P+L+Q+P AI Y + + + F W+ L DP Sbjct: 86 AEMGALYKEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYDQNYVQFL-WLPSLGEPDPM 144 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP----PADKGQAMILNWMPVVF 527 I P++ + S +I K + A + Q ++ +MP+ Sbjct: 145 YIL-------------------PVLSAASTWIMSKQTGSGATGAAAQQQKIMTIFMPLFI 185 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +FP+GL+IYW SNV VQQ I K Sbjct: 186 GYISLNFPSGLVIYWIVSNVFQFVQQHFIYK 216 >gi|163845720|ref|YP_001633764.1| 60 kDa inner membrane insertion protein [Chloroflexus aurantiacus J-10-fl] gi|222523425|ref|YP_002567895.1| 60 kDa inner membrane insertion protein [Chloroflexus sp. Y-400-fl] gi|163667009|gb|ABY33375.1| 60 kDa inner membrane insertion protein [Chloroflexus aurantiacus J-10-fl] gi|222447304|gb|ACM51570.1| 60 kDa inner membrane insertion protein [Chloroflexus sp. Y-400-fl] Length = 314 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 43/233 (18%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ +F +L GN + I+L T+ +L PL S+ M+ +QP + E++ K+ + P Sbjct: 14 LLLFFSSLTGNMALGIVLFTIAARLFILPLTLSSLRSSRRMQEVQPILKEIQRKYGKDP- 72 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------------SISLEMRH 455 Q LQ+ +++Y+ H INP+ GC P+LLQ+P+FF +Y+ + + + EM Sbjct: 73 QRLQEETLRVYREHKINPVGGCLPLLLQLPIFFGVYQAVYHLMVPEQRVNLSAAAAEMLK 132 Query: 456 ---------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 APF+G + A P N F F L I P++ + +Q Sbjct: 133 DERLAQILAAPFFGMDLGVPAFGP-NGFAGFAYL-----------ILPVLSIVLQLMQQL 180 Query: 507 MSPP----PADKG--QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M+ P P K QAM++ MP VF + +FP G ++YW S+V+ +VQQ Sbjct: 181 MATPRVQDPQQKAFTQAMLI--MPFVFGYIAFTFPTGAVLYWVVSSVVGVVQQ 231 >gi|302872912|ref|YP_003841548.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor obsidiansis OB47] gi|302575771|gb|ADL43562.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor obsidiansis OB47] Length = 341 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 126/256 (49%), Gaps = 44/256 (17%) Query: 338 WFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W F+A P+ L+ Y+ + G++GIA++L T+ V+ L PL KQ S + M Sbjct: 5 WLDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIHSMSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P++ E+++K+K + LQ+ M++LY+ NP AGCWP+L+Q+P+ F++Y V L Sbjct: 65 VAPRLQEIQQKYKNDQKK-LQEEMLKLYQETGYNPAAGCWPLLIQMPILFSLYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG----------------IWPI 495 +++DL T +GI + +G + PI Sbjct: 124 VYVLGKSHQYVRDLVTGA-----TGYGITQRIVDEAQKLGLDMHFLGINLAKKELLVLPI 178 Query: 496 IMSLSMFI--------QMKMSPPPADK-----GQAMILNWM---PVVFVFALSSFPAGLI 539 + + +M + Q K +P + ++M ++M P++ F P+GL+ Sbjct: 179 LSAATMLLSVWFSSNSQKKFNPQYSQSQSNAMAESMNRSFMIISPLMSYFIALQVPSGLV 238 Query: 540 IYWSWSNVISIVQQAV 555 +YW+ +N+ +I+QQ V Sbjct: 239 LYWTVTNLFTILQQFV 254 >gi|290968158|ref|ZP_06559703.1| stage III sporulation protein J family protein [Megasphaera genomosp. type_1 str. 28L] gi|290781833|gb|EFD94416.1| stage III sporulation protein J family protein [Megasphaera genomosp. type_1 str. 28L] Length = 223 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 80/249 (32%), Positives = 123/249 (49%), Gaps = 50/249 (20%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F I P+ +MS F F G AI++ T+ +K + PL KQ S M Sbjct: 2 FAHIISPLTYIMSTFLTYCYTFTQHIGYPSYGAAIIMLTLIIKFILSPLTAKQIKSMQGM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + IQPKI EL++K+K + + LQ+ M +LYK +NPL+GC PI++Q+P +ISI Sbjct: 62 QVIQPKIKELQKKYKGNQKK-LQEEMRKLYKETGVNPLSGCLPIIIQMPF------LISI 114 Query: 450 SLEMRHAPF------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 +R+ P+ + W+ L + DPT++ P++ +LS F+ Sbjct: 115 FYALRNYPYDPHFESFLWLPSLGSPDPTHVL-------------------PVLSALSTFL 155 Query: 504 ---QMKMSPPPADKGQAMILNWMPVV---FVFALS-SFPAGLIIYWSWSNVISIVQQAVI 556 QM + +GQA M +V F+ +S FP+GL+IYW SNV QQ ++ Sbjct: 156 IQKQMTGAQVTEGEGQASQQKIMQIVMPLFIGWISWRFPSGLVIYWVLSNVFQWAQQMIM 215 Query: 557 MKMHGAEIG 565 HG + G Sbjct: 216 --FHGTDKG 222 >gi|269122891|ref|YP_003305468.1| 60 kDa inner membrane insertion protein [Streptobacillus moniliformis DSM 12112] gi|268314217|gb|ACZ00591.1| 60 kDa inner membrane insertion protein [Streptobacillus moniliformis DSM 12112] Length = 224 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 114/217 (52%), Gaps = 23/217 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ Y VGN+GIAI++TT V+LL PL KQ S M+ IQP ++ ++EK+K Sbjct: 18 LLDLIYGFVGNYGIAIIVTTFLVRLLLLPLTLKQEKSMKRMREIQPMLEAIKEKYKDDKQ 77 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 QK M +LY+ +NP GC P+L+Q+PVF A+Y + + +A F W + Sbjct: 78 MQNQKTM-ELYQQEKVNPAGGCLPLLIQLPVFVALYHAFTTNALPENATFL-WFN---LS 132 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--------SPPPADKGQAMIL 520 P +FTL G + I P++ ++ FIQ K+ + P A Q M+ Sbjct: 133 KPDALFTLQGF---------SINILPLLTTVLTFIQQKLMQAKTQGSNDPMAGSMQTMMY 183 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 MP++ + P+GL +Y+ + ++S++QQ +M Sbjct: 184 T-MPILMLLIFYKMPSGLNLYYFVNTLLSVLQQVYVM 219 >gi|269798910|ref|YP_003312810.1| hypothetical protein Vpar_1856 [Veillonella parvula DSM 2008] gi|269095539|gb|ACZ25530.1| 60 kDa inner membrane insertion protein [Veillonella parvula DSM 2008] Length = 221 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 119/237 (50%), Gaps = 41/237 (17%) Query: 337 GWFYFIAKPMFMLMSYFYNL---VG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 G F I M L++Y + L +G ++G+AI+L T+ +K + PL KQ S M+ Sbjct: 6 GIFQPIVDLMSTLVTYAFQLTQMIGYPSYGVAIILLTIVIKAILAPLTVKQIKSMKAMQE 65 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ +L++K+K P + LQ M LYK +NPLAGC P+L+Q+P AIY Sbjct: 66 LQPRMKQLQDKYKNDPAK-LQAEMGALYKEMGVNPLAGCLPLLVQMPFLIAIY------W 118 Query: 452 EMRHAPF------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 ++ P+ + W+ L DP I PI+ +LS ++ Sbjct: 119 ALKDYPYDPNFVQFLWLPSLGDPDPMYIL-------------------PILSALSTWVMS 159 Query: 506 KMSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + + A + Q ++ +MP+ + SFP+GL+IYW SNV ++QQ I K Sbjct: 160 RQTSSGATGAAAQQQKIMTIFMPLFIGYISLSFPSGLVIYWVVSNVFQLIQQHFIYK 216 >gi|15613732|ref|NP_242035.1| stage III sporulation protein J [Bacillus halodurans C-125] gi|38503193|sp|Q9KDP2|OXAA2_BACHD RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|10173785|dbj|BAB04888.1| stage III sporulation protein J [Bacillus halodurans C-125] Length = 280 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 123/230 (53%), Gaps = 27/230 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +F PM L++ NL+ G++G++I++ T+ ++L PL KQ S M+ I+P++ Sbjct: 37 WNHFFVYPMSWLITTVANLLNGSYGLSIIIVTILIRLALLPLTLKQQKSMRAMQVIRPEM 96 Query: 397 DELREKFKQS---PPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +++K+K+ P+V +QK ++ LY+ H +NP+AGC P+ +Q+P+ A Y I + Sbjct: 97 EAIQKKYKEKGSKDPKVQQEMQKELLGLYQKHGVNPMAGCLPLFIQLPILMAFYFAIMRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E+R+ F W DL D ILPF + G + + MS +Q K +P Sbjct: 157 EEIRYHTFL-WF-DLGQPD--------YILPF-VAGITTYFQFKMTMSHQQQMQ-KTNPS 204 Query: 511 PADKGQA--------MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +D A ++L MPV+ + A S P+ L +YW N+ I+Q Sbjct: 205 DSDNPMANMMQMQMKVMLYVMPVMIIIAGLSLPSALSLYWVIGNIFMIIQ 254 >gi|108805992|ref|YP_645929.1| protein translocase subunit yidC [Rubrobacter xylanophilus DSM 9941] gi|108767235|gb|ABG06117.1| protein translocase subunit yidC [Rubrobacter xylanophilus DSM 9941] Length = 278 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 111/225 (49%), Gaps = 39/225 (17%) Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +L + Y+L + ++I L TV V+ L FPL KQ S ++ ++P+I ++ +++ +P Sbjct: 26 VLRFFHYDLGVEWWLSIALLTVVVRALLFPLTLKQMKSMRALQELRPEIQRIQRQYRDNP 85 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG------- 460 Q+ + M++LY+ N+NPL GC P+L+Q+P+F I+ VI E + G Sbjct: 86 -QLRNQEMMKLYQERNVNPLGGCLPLLVQMPIFIGIFYVIR---EFGGYSYGGRVVEPSE 141 Query: 461 ---------WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 W +DL+ ADP I P++ +L+M ++S Sbjct: 142 PTFETGGILWFQDLSQADPYYIL-------------------PVLSALTMLAGTEISAKY 182 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + Q I+ +P L +FPAGL +YW +N+++I Q I Sbjct: 183 MEPQQRWIMRIVPFAITLFLWNFPAGLFVYWISNNLVTIAQNYFI 227 >gi|282848769|ref|ZP_06258164.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula ATCC 17745] gi|294792401|ref|ZP_06757548.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp. 6_1_27] gi|294794207|ref|ZP_06759343.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp. 3_1_44] gi|282581555|gb|EFB86943.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula ATCC 17745] gi|294454537|gb|EFG22910.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp. 3_1_44] gi|294456300|gb|EFG24663.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp. 6_1_27] Length = 221 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 119/237 (50%), Gaps = 41/237 (17%) Query: 337 GWFYFIAKPMFMLMSYFYNL---VG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 G F I M L++Y + L +G ++G+AI+L T+ +K + PL KQ S M+ Sbjct: 6 GIFQPIVDLMSTLVTYAFQLTQMIGYPSYGVAIILLTIVIKAILAPLTVKQIKSMKAMQE 65 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ +L++K+K P + LQ M LYK +NPLAGC P+L+Q+P AIY Sbjct: 66 LQPRMKQLQDKYKNDPAK-LQAEMGALYKEMGVNPLAGCLPLLVQMPFLIAIY------W 118 Query: 452 EMRHAPF------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 ++ P+ + W+ L DP I PI+ +LS ++ Sbjct: 119 ALKDYPYDPNFVQFLWLPSLGDPDPMYIL-------------------PILSALSTWVMS 159 Query: 506 KMSP----PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + + A + Q ++ +MP+ + SFP+GL+IYW SNV ++QQ I K Sbjct: 160 RQTSNGATGAAAQQQKIMTIFMPLFIGYISLSFPSGLVIYWVVSNVFQLIQQHFIYK 216 >gi|288555292|ref|YP_003427227.1| OxaA-like protein YidC [Bacillus pseudofirmus OF4] gi|298286838|sp|O87567|OXAA_BACPE RecName: Full=Membrane protein oxaA; Flags: Precursor gi|288546452|gb|ADC50335.1| OxaA-like protein YidC [Bacillus pseudofirmus OF4] Length = 252 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 30/223 (13%) Query: 338 WFYFIAKPM-FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +F P+ ++L+S L G+FG++I++ T+ ++L PL KQ S+ M+ ++P++ Sbjct: 35 WNHFFVYPLSWVLISVADLLNGSFGLSIIVVTIGIRLFLLPLMIKQQKSSRAMQALRPEM 94 Query: 397 DELREKFKQSPP------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY-KVISI 449 + L++K+ Q Q +QK ++ LYK +NP+AGC P+ +Q+PV A Y ++ Sbjct: 95 EALQKKYGQGTKRDPKDQQKMQKELMALYKDSGVNPMAGCLPLFIQLPVMMAFYFAIMRT 154 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + H+ W DL + DP I P++ ++ F+Q+KM+ Sbjct: 155 EVIALHSFLW---FDLGSPDPLYIL-------------------PVVAGITTFLQVKMTS 192 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + +I+ MPV+ V A + P+ L +YW N+ I+Q Sbjct: 193 FQLNDQMKVIIYIMPVMIVVAGVTLPSALSLYWVVGNLFMIIQ 235 >gi|148658060|ref|YP_001278265.1| 60 kDa inner membrane insertion protein [Roseiflexus sp. RS-1] gi|148570170|gb|ABQ92315.1| 60 kDa inner membrane insertion protein [Roseiflexus sp. RS-1] Length = 330 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 54/253 (21%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W F+ +L++ FY G+ G AI+L T+ +++ PL K S+ M+ +QP + Sbjct: 4 WLAFVEFLQQVLLT-FYRWTGSAGFAIILFTIVARIVILPLTIKSLQSSRKMQELQPHMK 62 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 EL+ K+ + P Q LQ+ ++LY+ + +NP+ GC P+LLQ+P+F +Y+ + + A Sbjct: 63 ELQRKYGKDP-QKLQEETMRLYREYKVNPVGGCLPMLLQLPIFLGVYQAVINLTRVSPAE 121 Query: 458 FWG-------------------------------WIKDLAAADPTNIFTLFGILPFYLPG 486 G W+ DL DP I + ++ Sbjct: 122 HAGSAMLRVLNEQGIAVGVASATLGQPQLAGSFLWLPDLGKTDPYYILPILSVI------ 175 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWS 543 + +Q+ +P D Q ++ M P+VF + FP+G ++YW Sbjct: 176 ------------FQLIVQLMATPRVQDPQQKAMMQSMLILPIVFGYIGFIFPSGAVLYWV 223 Query: 544 WSNVISIVQQAVI 556 +++SI+QQ VI Sbjct: 224 VGSILSIIQQYVI 236 >gi|189461403|ref|ZP_03010188.1| hypothetical protein BACCOP_02058 [Bacteroides coprocola DSM 17136] gi|189431932|gb|EDV00917.1| hypothetical protein BACCOP_02058 [Bacteroides coprocola DSM 17136] Length = 617 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 150/329 (45%), Gaps = 31/329 (9%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W+ ++Y++ VF+ K + + + Y ++A T + F F Sbjct: 250 WVAFKNQYFSCVFMAEKNFENATLESKIEQKGSGYMKNYTAEMKTAFDPTGAQPSRFQFY 309 Query: 311 -GAKEFPTIHHYEKDLAIP----RFEMLIDWGWFYFIAKPMFMLMSYFY--NLVG----- 358 G F T+ DL+ E L+ GW P+ L++ ++ NL Sbjct: 310 FGPNHFKTLLA-TNDLSFKDKDQELEDLVYLGW------PIIRLINRWFTINLFDWLSSW 362 Query: 359 --NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAM 415 + GI I+L T+ VK+L P K ++S+A M+ ++P +D++ K+ KQ Q+ Sbjct: 363 GLSMGIVILLMTIIVKILVLPTTWKSFISSAKMRALKPYVDKINAKYPKQEDALKKQQET 422 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD-----P 470 + LY + ++P+ GC P+L+Q PVF A++ + ++E+R F W DL+A D Sbjct: 423 MALYSQYGVSPMGGCLPMLIQTPVFMALFFFVPNAIELRQQSFL-WASDLSAYDDLISWS 481 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 T+I L L + F + ++ + M Q M P ++ MPV+F F Sbjct: 482 THIPLLGNHLSLFCLLF---SVTTVLNQIIMMKQQDMGNNPQMAAMKWMMYIMPVMFFFI 538 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + + +GL Y+ S +I I+ ++ +M Sbjct: 539 FNEYASGLSYYYFISGLIGIITMWIMRRM 567 >gi|124010502|ref|ZP_01695137.1| inner membrane protein OxaA [Microscilla marina ATCC 23134] gi|123982339|gb|EAY23887.1| inner membrane protein OxaA [Microscilla marina ATCC 23134] Length = 548 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 78/246 (31%), Positives = 132/246 (53%), Gaps = 30/246 (12%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +++W Y + P+F + F V N+G+ I+L ++ +K + FPL + Y S A MK I Sbjct: 246 VVNWFAKYLVV-PLFAFLEGF---VSNYGVIIILLSLIIKSMLFPLTYRSYKSMAKMKVI 301 Query: 393 ----QPKIDELREKFKQS----PPQVLQKAMIQ--LYKTHNINPLA---GCWPILLQIPV 439 QP++D +EK ++ P + +M Q LYK +P A GC P+LLQ+P+ Sbjct: 302 NKYLQPRMDAFKEKHRKENGGKEPDMQTTSMHQQELYKKIGQSPFAAVQGCLPMLLQMPI 361 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 FA++ ++E+R PF W DL+ D ++ T LPF H+ I+ ++MS+ Sbjct: 362 LFAMFMFFPSAIELRQQPFL-WASDLSVYD--HVITFSFNLPFLGN---HISIFTLLMSI 415 Query: 500 -SMFIQMKMSPPPADKG------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 S+ I M + A G +++ MP++F F L+S+P+GL Y+ N+I++ Q Sbjct: 416 SSIGITMTSNQNTATAGGPNAGMMKVMMYMMPIIFFFVLNSYPSGLSFYYLIQNLITLGQ 475 Query: 553 QAVIMK 558 Q +I + Sbjct: 476 QHLIKR 481 >gi|237736113|ref|ZP_04566594.1| inner membrane protein YIDC [Fusobacterium mortiferum ATCC 9817] gi|229421824|gb|EEO36871.1| inner membrane protein YIDC [Fusobacterium mortiferum ATCC 9817] Length = 206 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 119/210 (56%), Gaps = 21/210 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ Y+L GNFG+AI+L T+ +K++ PL KQ S +MK +QP+I++++++++ P Sbjct: 15 LLHLMYSLTGNFGVAIILATIVIKIILLPLTLKQDKSMKSMKVLQPEIEKIKQQYQNDPK 74 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + QK M +LY+ H +NP+ GC P+L+Q+P+ +A++ V+ + + + W++ L Sbjct: 75 MMNQKTM-ELYQKHKVNPMGGCLPLLIQLPILWALFGVLRDPVTVPQDSTFLWMQ-LVNP 132 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 D P+Y I PI+ + F+Q K+ + ++ P++ V Sbjct: 133 D-----------PYY--------ILPILNGVVSFLQQKVMGSSDNPQMKNMMYMFPLMMV 173 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F PAGL IYW S+V ++VQQ +IMK Sbjct: 174 FISYKMPAGLQIYWLASSVAAVVQQYLIMK 203 >gi|213400709|gb|ACJ47003.1| hypothetical protein [Wolbachia endosymbiont of Nasonia longicornis] Length = 171 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 94/168 (55%), Gaps = 4/168 (2%) Query: 222 AVLG--DKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYL 278 VLG D L E Y DI K + S +W G +DKYW + IP K + K+ Sbjct: 3 GVLGAFDNKLEEWTYKDISKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHT 62 Query: 279 S-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + + ++Q F +ILPG S++ N+ FAGAK+ + Y+ L IP F+ +D+G Sbjct: 63 NVNNTDKFQVDFVKPYKSILPGASVSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFG 122 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL L + Y+S Sbjct: 123 VLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLSLFNRSYIS 170 >gi|229087531|ref|ZP_04219663.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-44] gi|228695778|gb|EEL48631.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-44] Length = 260 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 124/239 (51%), Gaps = 33/239 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ FM+ +++ G +FGIAI++ T+ V+ PLA QY S MK +QP++ + Sbjct: 40 YFVYPISFMIQFVAHHVPGASFGIAIIIITLIVRSAMIPLAISQYRSQMKMKKMQPELQK 99 Query: 399 LREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK + QK M +L K NPLAGC P+L+Q+P+F A+Y IS + E+ Sbjct: 100 LKEKHGDVRKDIEKQKQYQKEMSELMKAGGWNPLAGCLPLLIQMPIFSALYYAISRTEEI 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F W+ +L ADP +I PI+ +L+ FIQMK+ Sbjct: 160 RTSSFL-WV-NLGHADPYHIL-------------------PILAALTTFIQMKIMQSNTS 198 Query: 514 KG-QAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK-MHGAEIGL 566 G Q +L MP + +F + P+GL++YW N+ ++ Q V+ K M E+ L Sbjct: 199 AGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWVTGNLFTMTQMIVLRKVMERKEVQL 257 >gi|312144701|ref|YP_003996147.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium sp. 'sapolanicus'] gi|311905352|gb|ADQ15793.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium sp. 'sapolanicus'] Length = 216 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 115/214 (53%), Gaps = 25/214 (11%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + Y +VGN+G+AI++ T+ +K++ +PL KQ S M+ IQP++ +++ K++ + Sbjct: 13 LDFIYGIVGNYGLAIVIFTLIIKIVLYPLTAKQTRSMREMQEIQPEMKKIQNKYEDDKEK 72 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPF-W-GWIKDLA 466 Q+ M++LYK H +NP AGC+P+++Q+ + +Y+ I ++ +M + F W G I + Sbjct: 73 -QQEEMMKLYKDHGVNPAAGCFPMIVQMAILIPLYRTIFTLGDQMANEAFLWIGTITQGS 131 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--MILNWMP 524 A+P L +++M Q ++ + G+ ++ MP Sbjct: 132 LAEPDIAIVLLN-------------------AVAMLAQTHITQQISGGGEKSNKMMYMMP 172 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + VF PAG+++YW S + ++ QQ V+ K Sbjct: 173 LFIVFIGFRLPAGVLVYWFVSTLFTVGQQYVLSK 206 >gi|255076059|ref|XP_002501704.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299] gi|226516968|gb|ACO62962.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299] Length = 480 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 20/219 (9%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G AI+ TV VK++ FPL KKQ + M+ IQP++ EL+ + P+ LQ +L Sbjct: 141 SYGYAILALTVLVKVVTFPLTKKQVEGSLQMQAIQPRVKELQAMYAND-PERLQMETARL 199 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVIS---ISLEMRHAPFW----GWIKDLAAADPT 471 YK N NPLAGC P +PVF +Y+ +S + E+ +W G + A + Sbjct: 200 YKEANFNPLAGCLPTFATLPVFIGLYRALSNAAVEGELTDGFYWIPSLGGPTSIEARNDG 259 Query: 472 NIFT-LF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-------PADKGQAMI 519 N F LF G P + + P+++ S I K+ P PA + I Sbjct: 260 NGFAWLFPFVDGAPPLGWHDTIAYLVLPVLLVASQLISQKVMTPDQPKSDDPAQQQSQAI 319 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 L ++P + F + PAGL +YW +N+ S Q + K Sbjct: 320 LKFLPFMIGFFSLNVPAGLTLYWFANNIFSTAQTVYLRK 358 >gi|145344819|ref|XP_001416922.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] gi|144577148|gb|ABO95215.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] Length = 271 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 116/225 (51%), Gaps = 25/225 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G +I++ TV VKL FPL+KKQ S+ M+ +QP+I EL+ + P+ LQ +L Sbjct: 39 SYGFSIIVLTVLVKLATFPLSKKQVESSMQMQAMQPRIKELQAMYAND-PERLQMEQARL 97 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVIS--ISLEMRHAPFWGWIKDLAAADPTNIFTL 476 YK NPLAGC P+ +PVF +Y+ +S S + F+ WI L PT+I + Sbjct: 98 YKEAGFNPLAGCLPVFATLPVFIGLYRALSNAASEGLLTDGFY-WIPSLGG--PTSIASR 154 Query: 477 -----FGILPFYLPGFMHVG--------IWPIIMSLSMFIQMKMSPP------PADKGQA 517 F L ++ G +G + P+++ S ++ ++ P PA + Sbjct: 155 NAGSGFAWLWPFVDGHPPLGWHDTTAYLVLPVLLVASQYVSQQIVSPQPKTDDPAQQQSQ 214 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 IL ++P++ F + PAGL +YW +N+I+ Q ++ K A Sbjct: 215 AILKFLPLMIGFFSLNVPAGLTLYWFANNIITTAQTLILRKTTTA 259 >gi|188995310|ref|YP_001929562.1| putative inner membrane protein translocase component YidC [Porphyromonas gingivalis ATCC 33277] gi|254773011|sp|B2RKS0|OXAA_PORG3 RecName: Full=Inner membrane protein oxaA gi|188594990|dbj|BAG33965.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 627 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 93/340 (27%), Positives = 165/340 (48%), Gaps = 26/340 (7%) Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK--ETSFHSQFKYLSDGHARYQAKFS 290 + SD ++ E W+ DKY+ASV + E + +Q + S Sbjct: 242 RLSDSKQEDKKTLEEPLHWVSFKDKYFASVLVCDSYFENNKLAQKTAAAGSDYLKNCTMS 301 Query: 291 AN-EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGW--FYFIAK 344 A + + PG T F G ++ + Y+K + + L+ G F +I + Sbjct: 302 ATFPLDVRPGTKAGFT--FFFGPLKYNMLRAYDKGMKAEDNLDLDHLVYLGASIFRWINR 359 Query: 345 PMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 M + S F N+G+ I+L T+ +KLL PLA K Y+S+A M+ ++P++ E+ K+ Sbjct: 360 YMIIPASTFLQQYFSNWGLIILLLTLGIKLLISPLAYKGYLSSAKMRLLRPQVQEINAKY 419 Query: 404 ---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 Q Q A + LY+ P++GC P+LLQ P A+Y ++++R F Sbjct: 420 PGKDQESMMKRQSATMNLYRAAGAGPMSGCLPMLLQFPFLIAMYMYFPTTIDIRQQSFL- 478 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKGQA- 517 W +DL++ D +F+ +P L F HV ++ ++MS+S + ++ + +D GQ Sbjct: 479 WAEDLSSYDA--VFSWTADIPL-LSQFYGNHVSLFCLLMSISNILYIRYTMNQSDTGQEG 535 Query: 518 -MILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +L WMP V+F+F + +GL Y+ S++I+++Q Sbjct: 536 MAMLKWMPYITTVMFLFFFNQNASGLCYYYFLSSIITVIQ 575 >gi|261410107|ref|YP_003246348.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus sp. Y412MC10] gi|329925107|ref|ZP_08280051.1| putative stage III sporulation protein J [Paenibacillus sp. HGF5] gi|261286570|gb|ACX68541.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus sp. Y412MC10] gi|328940226|gb|EGG36558.1| putative stage III sporulation protein J [Paenibacillus sp. HGF5] Length = 296 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 105/200 (52%), Gaps = 28/200 (14%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G +G+++++ + V+ L PL KQ S+ M+ IQP+I ++REK+K P +V Q ++ Sbjct: 67 GEYGLSVLVMVLIVRTLILPLTLKQVRSSKAMQAIQPEIQKIREKYKDQPEKV-QMETMK 125 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR-HAPFWGWIKDLAAADPTNIFTL 476 L++ + +NP+AGC P+++Q+P+F A+Y I + +R H W L P +F L Sbjct: 126 LFQENKVNPMAGCLPLIVQMPIFIALYHSIYYNNLLRDHEFLW-----LQLGQPDKLFIL 180 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQ----MKMSPPPADKGQAMILNWMPVVFVFALS 532 P++ + + + Q MKM+P P +L P++ Sbjct: 181 -----------------PVLAAATTYFQTKMMMKMNPSPQMGMMQFMLFVYPILIFVMSF 223 Query: 533 SFPAGLIIYWSWSNVISIVQ 552 FP+ L +YW +SN+ +IVQ Sbjct: 224 QFPSALPLYWFYSNLYTIVQ 243 >gi|307565938|ref|ZP_07628397.1| membrane protein insertase, YidC/Oxa1 family [Prevotella amnii CRIS 21A-A] gi|307345366|gb|EFN90744.1| membrane protein insertase, YidC/Oxa1 family [Prevotella amnii CRIS 21A-A] Length = 641 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 134/518 (25%), Positives = 241/518 (46%), Gaps = 94/518 (18%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERK-----NIQTVK--QPNQVDNSYA-----A 55 FV +AL V+ +AW + P E++ +RK +I T K Q ++ D+ A A Sbjct: 9 FVLMAL-VLFGFAW---WQQPSKEQIAQQRKQFVADSIATAKKAQKDKEDSFKAEQVKQA 64 Query: 56 VLIDDRA---QALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGY--H----LDVSSNS 105 V +D +AL + + LKN ++ +++ KG ++ Y H D S + Sbjct: 65 VALDTTKLFYEALKGKKQDIVLKNNNVALTLSSKGGVVTKAIIKNYVGHNIAVKDGSKDL 124 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIEL------PNSNT------VWNLISGKILTPT 153 P VTL SN ++ FA + ANNIE P + T N GK LT Sbjct: 125 PYVTLFD-SNDQSLNFA---LAAKANNIETKDLYFTPTNQTDSTVTFTANAAQGKSLT-- 178 Query: 154 TPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNS-----IDQIRFSPRGRIMRHKP 207 L +K + L ++ LF + TNN +D++R RG ++ Sbjct: 179 ----LTYKLGKDYLLHLSVKAQGVEGLF----SPTNNQMEVEWLDKVRQQERGFSFENR- 229 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 AT T+ EG + L + + EK + E+ W+ ++++++V I Sbjct: 230 -YATLTYKKSEGGTSYLSEGA---------EKEETT--EETTDWVAFKNQFFSAVMISKD 277 Query: 268 ETSFHSQFKYL-SDGHARYQAKFSANEITIL--PGKSITTTNFLFAGAKEFPTIHHYEKD 324 S ++ K + D + Y ++ AN T GK + F F G +F + E + Sbjct: 278 NFSSGAKLKSVPQDKSSGYLKQYEANMKTAFDPSGKKPSEFEFYF-GPNDFRKLQAVEAE 336 Query: 325 LAIPR---FEMLIDWGWFYFIAKPMFMLMS-----YFYNLVGNF---GIAIMLTTVFVKL 373 + + L+ GW P+F +++ Y ++ + GI ++L T+ +K Sbjct: 337 STFGKNLEMQRLVYLGW------PLFRIINRWFTIYVFDFLSKLFPMGIVLILITLLLKA 390 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV-LQKAMIQLYKTHNINPLAGCWP 432 + +P+ KK Y+S+A M+ ++PK+DE +++ Q+ Q+AM+Q+Y + ++PL+GC P Sbjct: 391 ITYPMVKKSYMSSAKMRVLKPKLDEATKQYNGKEDQMKKQQAMMQMYSEYGVSPLSGCLP 450 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 +L+Q P++ A++ + ++++R F W+KDL+ DP Sbjct: 451 MLIQAPIWIAMFNFVPNAIQLRGESFL-WMKDLSTYDP 487 >gi|240254150|ref|NP_173858.5| ALB4 (ALBINA 4) [Arabidopsis thaliana] gi|223590242|sp|Q9FYL3|ALB31_ARATH RecName: Full=ALBINO3-like protein 1, chloroplastic; AltName: Full=Arabidopsis thaliana envelope membrane integrase; AltName: Full=Protein ALBINA 4; Short=Ath4; AltName: Full=Protein ARTEMIS; Flags: Precursor gi|91680591|emb|CAJ45566.1| Alb protein [Arabidopsis thaliana] gi|332192418|gb|AEE30539.1| ALBINO3-like protein 1 [Arabidopsis thaliana] Length = 499 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 77/251 (30%), Positives = 121/251 (48%), Gaps = 28/251 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WF IA M ++ + + ++G AI+L TV VK FPL KKQ S MK+ Sbjct: 96 WFSGIANYMETILKVLKDGLSTVHVPYSYGFAIILLTVLVKAATFPLTKKQVESAMAMKS 155 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-IS 450 + P+I ++E++ ++ Q +LYK INPLAGC P L IPV+ +Y+ +S ++ Sbjct: 156 LTPQIKAIQERYAGDQEKI-QLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 214 Query: 451 LEMRHAPFWGWIKDLAA----ADPTNIFTLFGILPFYLPGFMHVGIWP-----------I 495 E + WI LA A N + + PF + G +G WP + Sbjct: 215 DEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPF-IEGHPPLG-WPDTLAYLVLPLLL 272 Query: 496 IMSLSMFIQM---KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + S + IQ+ S PA K + +P++ + S P+GL +YW +N++S Q Sbjct: 273 VFSQYLSIQIMQSSQSNDPAMKSSQAVTKLLPLMIGYFALSVPSGLSLYWLTNNILSTAQ 332 Query: 553 QAVIMKMHGAE 563 Q + K GA+ Sbjct: 333 QVWLQKYGGAK 343 >gi|138897069|ref|YP_001127522.1| OxaA-like protein [Geobacillus thermodenitrificans NG80-2] gi|134268582|gb|ABO68777.1| Stage III sporulation [Geobacillus thermodenitrificans NG80-2] Length = 238 Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 73/226 (32%), Positives = 117/226 (51%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L+ Y L+G +FG++I++ T+ ++LL PL +Q + M+ +QP+I Sbjct: 20 WNEYIVYPLSWLIKYVAELLGGSFGLSIIVVTILIRLLILPLMIQQTRNAKAMQALQPEI 79 Query: 397 DELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + LR+K+ Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+ Y I + E+ Sbjct: 80 EALRKKYSSKDAQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPILIGFYHAIMRTREI 139 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 F W DL DP I P++ L+ FIQ K+ Sbjct: 140 AQHNFL-WF-DLGDKDPYYIL-------------------PLVAGLTTFIQQKIMMAGSA 178 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+L MP++ V +FPA L +YW N+ SIVQ +I Sbjct: 179 QQNPQMAMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIVQTYLI 224 >gi|164686450|ref|ZP_02210478.1| hypothetical protein CLOBAR_00015 [Clostridium bartlettii DSM 16795] gi|164604461|gb|EDQ97926.1| hypothetical protein CLOBAR_00015 [Clostridium bartlettii DSM 16795] Length = 254 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 113/220 (51%), Gaps = 38/220 (17%) Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +++ + N+VG++ +I++ T+ V+L PL KQ ST M++IQPK+ E++EK+K P Sbjct: 11 VILGFIVNIVGDYAWSIIIFTILVRLCLMPLMIKQIKSTKAMQDIQPKMQEIQEKYKNKP 70 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--------ISLEMRHAPFW 459 + Q+ +++LYK INP+AGC P+ +Q+P+ ++ ++ + HA Sbjct: 71 EKQ-QEELMKLYKDAKINPMAGCLPMFIQLPILMGLFALLRDPVAHGVFATEAAYHAANH 129 Query: 460 G--WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 G WI ++ ++ L G+ ++ M+ S D+ QA Sbjct: 130 GFLWIASVSQTHNLSLGILSGVSAYF---------------------MQKSMATTDESQA 168 Query: 518 MILNWMPVVFVFALS-----SFPAGLIIYWSWSNVISIVQ 552 ++ M +V A+S ++ AGL +YW+ SN+ SI Q Sbjct: 169 QMMKSMTLVMT-AMSFWWGYTYEAGLALYWTMSNIFSIAQ 207 >gi|56422031|ref|YP_149349.1| OxaA-like protein [Geobacillus kaustophilus HTA426] gi|261420905|ref|YP_003254587.1| OxaA-like protein precursor [Geobacillus sp. Y412MC61] gi|297531689|ref|YP_003672964.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. C56-T3] gi|319768575|ref|YP_004134076.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC52] gi|56381873|dbj|BAD77781.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426] gi|261377362|gb|ACX80105.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC61] gi|297254941|gb|ADI28387.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. C56-T3] gi|317113441|gb|ADU95933.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC52] Length = 254 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 76/235 (32%), Positives = 120/235 (51%), Gaps = 31/235 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L+ Y L+G +FG++I++ T+ ++LL PL +Q + M+ +QP+I Sbjct: 36 WNEYIVYPLSWLIKYVAGLLGGSFGLSIIVVTILIRLLILPLMIQQTRNAKAMQALQPEI 95 Query: 397 DELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + LR+K+ Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+ Y I + E+ Sbjct: 96 EALRKKYSSKDAQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPILIGFYHAIMRTREI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 F W DL DP I P+I ++ FIQ K+ Sbjct: 156 AQHNFL-WF-DLGEKDPYYIL-------------------PVIAGVTTFIQQKIMMAGSA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + AM+L MP++ V +FPA L +YW N+ SIVQ +I G EI Sbjct: 195 QQNPQMAMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIVQTYLI---KGPEIA 246 >gi|302836307|ref|XP_002949714.1| inner membrane ALBINO3-like protein 2, chloroplast precursor [Volvox carteri f. nagariensis] gi|300265073|gb|EFJ49266.1| inner membrane ALBINO3-like protein 2, chloroplast precursor [Volvox carteri f. nagariensis] Length = 413 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 112/214 (52%), Gaps = 26/214 (12%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G AI+ TV VKL FPL +KQ ST +++ +QP++ EL+ K P+ LQ ++ Sbjct: 104 SYGFAIITLTVLVKLATFPLTQKQVESTLSLQALQPRVKELQAKHADD-PETLQLETARM 162 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRHAPFWGWIKDLAAADPTNIFTL 476 YK +NPLAGC P L IPVF +Y +S + + + F+ WI L+ PT T+ Sbjct: 163 YKEAGVNPLAGCLPTLATIPVFIGLYNALSNAAKAGLLTEGFF-WIPSLSG--PT---TI 216 Query: 477 FGILPFYLP---GFMHVG--------IWPIIMSLSMFIQMKM------SPPPADKGQAMI 519 G L + P G VG + P+++ S + K+ S PA + I Sbjct: 217 GGGLEWLFPFQDGAPPVGWANAAAYLVMPVLLVASQYASQKIISTTQNSNDPAQQQSQAI 276 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 L ++P++ + + P+GL +YW +N++S QQ Sbjct: 277 LKFLPLMIGWFSLNVPSGLTLYWFVNNLLSTAQQ 310 >gi|221195222|ref|ZP_03568278.1| 60 kDa inner membrane insertion protein [Atopobium rimae ATCC 49626] gi|221185125|gb|EEE17516.1| 60 kDa inner membrane insertion protein [Atopobium rimae ATCC 49626] Length = 252 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 122/222 (54%), Gaps = 10/222 (4%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W W I + ++S G++G+A+++ TV ++LL PL KQ S A M+ +QPK Sbjct: 2 WDW---IINLLTSILSGIQGFCGDWGLAVIILTVIIRLLLVPLTNKQTASMARMQVVQPK 58 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + E+++++ P + Q+ M +LY NPL GC PI LQ+P+FFA++ +++ + H Sbjct: 59 LKEIQDRYADDPVR-QQEEMRKLYAEIKFNPLGGCLPIFLQMPIFFALF---TVARNVPH 114 Query: 456 -APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 A F+G + +A++ P +F GI +P + V ++ ++ + M + + Sbjct: 115 DAHFYGILSSIASS-PAEVFASSGITGV-IPYLVFVILFGVLTFIPMMMNANNGASEQKQ 172 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q ++ M +V ++ + PA +++Y+ S++ ++QQ +I Sbjct: 173 QQMLMGGMMSLVMLWFGWTVPAAVLLYYVTSSLWQVIQQKLI 214 >gi|196249890|ref|ZP_03148586.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16] gi|196210766|gb|EDY05529.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16] Length = 254 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 119/226 (52%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L+ Y L+G +FG++I++ T+ ++LL PL +Q + M+ +QP+I Sbjct: 36 WNEYIVYPLSWLIKYVAELLGGSFGLSIIVVTILIRLLILPLMIQQTRNAKAMQALQPEI 95 Query: 397 DELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + LR+K+ Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+ Y I + E+ Sbjct: 96 EALRKKYSSKDAQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPILIGFYHAIMRTREI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 F W DL D P+Y I P++ L+ FIQ K+ Sbjct: 156 AQHNFL-WF-DLGDKD-----------PYY--------ILPLVAGLTTFIQQKIMMAGSA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+L MP++ V +FPA L +YW N+ SIVQ +I Sbjct: 195 QQNPQMAMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIVQTYLI 240 >gi|300772349|ref|ZP_07082219.1| membrane protein OxaA [Sphingobacterium spiritivorum ATCC 33861] gi|300760652|gb|EFK57478.1| membrane protein OxaA [Sphingobacterium spiritivorum ATCC 33861] Length = 607 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 122/233 (52%), Gaps = 21/233 (9%) Query: 333 LIDWGWF------YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 +I+ GW +I P+F + F+ ++GI I++ T+ +K + FPL K Y S Sbjct: 340 IINMGWGPMRWINQWITVPVFNFLDGFHM---SYGIVILILTILLKGVLFPLTYKSYQSM 396 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ ++P++DE++ K + +LQ+ ++LYK +NPL GC P++LQ+P A + Sbjct: 397 AKMRVLKPQLDEIKAKVGEDNAVLLQQEQMKLYKQAGVNPLGGCLPLVLQMPFTIAFFYF 456 Query: 447 ISISLEMRHAPFWGWIKDLAAAD-PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 E+R F W+KDL+ D P +FGI HV + ++M+L+ + Sbjct: 457 FPNLFELRGESFL-WVKDLSTYDSPITFPAIFGI--------DHVSLMCVLMTLTTLLTT 507 Query: 506 -KMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + GQ + + MP++F F L+SFPAGL Y+ V + + Q +I Sbjct: 508 WYNNATSGATGQMKYIGYFMPLIFFFVLNSFPAGLNYYYFLGAVFTFLTQLLI 560 >gi|255657635|ref|ZP_05403044.1| putative sporulation membrane protein [Clostridium difficile QCD-23m63] gi|296452684|ref|ZP_06894375.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP08] gi|296880064|ref|ZP_06904033.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP07] gi|296258466|gb|EFH05370.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP08] gi|296428931|gb|EFH14809.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP07] Length = 235 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 32/221 (14%) Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +++ + V ++GI+I+L T+ VK++ PL KQ ST M++IQP+I E++EK+K P Sbjct: 10 LILKVIFEFVNHYGISIILFTILVKIILLPLTIKQTKSTKAMQDIQPRIKEIQEKYKNKP 69 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV----ISISLEMRHAPFWG--- 460 + + +++LY INPL+GC P+L+Q P+ ++ V ++ + A F Sbjct: 70 EKQ-NEEIVKLYGEAKINPLSGCLPLLIQFPILIGLFSVLREPVAHGVFANKAAFLAADN 128 Query: 461 ---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 WIK L + P I +F Y+ +Q M+P +G Sbjct: 129 GFLWIKSLTS--PDYILAVFSGASAYV------------------MQKVMTPKDQLQGSM 168 Query: 518 MILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAVIM 557 ++ ++ F FPAGL +YW+ SN+ SI Q +IM Sbjct: 169 KVMTYVMAGMSFYWGFIFPAGLTLYWTVSNLFSIAQYYLIM 209 >gi|317123172|ref|YP_004103175.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter marianensis DSM 12885] gi|315593152|gb|ADU52448.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter marianensis DSM 12885] Length = 224 Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 113/201 (56%), Gaps = 24/201 (11%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 + G+ G++I+L TV V+L+ PL Q S M+ +QP+++ +++K++ +P Q +A+ Sbjct: 22 VTGSAGLSIILFTVLVRLVLLPLTISQMRSMQRMQALQPEVERIQKKYRDNP-QKANEAI 80 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++L++ +N+NP +GC P+L+Q P+ +A++ ++L + + WI DL A DP +I Sbjct: 81 MKLWRENNVNPASGCLPLLVQFPILYALF----LALRTFSSGAFLWIPDLRARDPLSIL- 135 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 P++ ++ + QMK S Q +L MP + F SFP Sbjct: 136 ------------------PVLAGVTTYFQMKTSMTTVQPQQRTMLVLMPAMLTFFAWSFP 177 Query: 536 AGLIIYWSWSNVISIVQQAVI 556 AGL +YW SN+ SIVQQ V+ Sbjct: 178 AGLALYWVTSNLFSIVQQVVL 198 >gi|311070645|ref|YP_003975568.1| OxaA-like protein precursor [Bacillus atrophaeus 1942] gi|310871162|gb|ADP34637.1| OxaA-like protein precursor [Bacillus atrophaeus 1942] Length = 249 Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 115/227 (50%), Gaps = 30/227 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ +++Y L G N+G++I++ TV ++LL PL KQ S+ M+ +QP++ Sbjct: 26 WDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTVLIRLLILPLMIKQLRSSKAMQALQPEM 85 Query: 397 DELREKFKQSPPQVLQKAMIQ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ + Q+ + L+ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 86 QKLKEKYSSKDQKTQQQLQQETMALFSKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 145 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SP 509 H+ W DL D P+Y I PI+ ++ F+Q K+ Sbjct: 146 SEHSFLWF---DLGEKD-----------PYY--------ILPIVAGVATFVQQKLMMAGN 183 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+L MP++ + SFPA L +YW N+ I Q +I Sbjct: 184 ATQNPQMAMMLWIMPIMIIVFAISFPAALSLYWVVGNLFMIAQTFLI 230 >gi|320531077|ref|ZP_08032106.1| putative OxaA-like protein [Selenomonas artemidis F0399] gi|320136659|gb|EFW28612.1| putative OxaA-like protein [Selenomonas artemidis F0399] Length = 225 Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 115/212 (54%), Gaps = 26/212 (12%) Query: 348 MLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 M++ FY + G ++G I+L T+ +KL+ +PL KQ S M+ IQPK+ +++EK Sbjct: 18 MILGAFYTVTGAAGLESYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEK 77 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI-YKVISISLEMRHAPFWGW 461 +K P++LQ+ +L++ +NPLAGC P+L+Q+P+ + Y + + + A + W Sbjct: 78 YKND-PRMLQQKTGELFRQAGVNPLAGCLPLLVQMPILMGMYYALFNFAYPSEAAEAFLW 136 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I L+A DP I P++ +L+ F+Q KM+ + +++ Sbjct: 137 IPHLSAPDPLYIL-------------------PVLSALTTFLQQKMTSTEMNPQMKIMMT 177 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MP+ + +FPAGL++YW N++ I QQ Sbjct: 178 VMPLFIGWISLNFPAGLVLYWVTMNIVQIAQQ 209 >gi|313894712|ref|ZP_07828273.1| stage III sporulation protein J [Selenomonas sp. oral taxon 137 str. F0430] gi|312976621|gb|EFR42075.1| stage III sporulation protein J [Selenomonas sp. oral taxon 137 str. F0430] Length = 225 Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 115/212 (54%), Gaps = 26/212 (12%) Query: 348 MLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 M++ FY + G ++G I+L T+ +KL+ +PL KQ S M+ IQPK+ +++EK Sbjct: 18 MILGAFYTVTGAAGLESYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEK 77 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI-YKVISISLEMRHAPFWGW 461 +K P++LQ+ +L++ +NPLAGC P+L+Q+P+ + Y + + + A + W Sbjct: 78 YKND-PRMLQQKTGELFRQAGVNPLAGCLPLLVQMPILMGMYYALFNFAYPSEAAEAFLW 136 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I L+A DP I P++ +L+ F+Q KM+ + +++ Sbjct: 137 IPHLSAPDPLYIL-------------------PVLSALTTFLQQKMTSTEMNPQMKIMMT 177 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MP+ + +FPAGL++YW N++ I QQ Sbjct: 178 VMPLFIGWISLNFPAGLVLYWVTMNIVQIAQQ 209 >gi|205371916|ref|ZP_03224736.1| OxaA-like protein precursor [Bacillus coahuilensis m4-4] Length = 257 Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 27/220 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L+ F +L G ++G++I+ T+ ++L+ PL KQ ++ M+ + P+I Sbjct: 36 WNKYFVFPLSWLIITFADLFGGSYGLSIITVTILIRLVILPLVIKQTQNSKAMQKLSPEI 95 Query: 397 DELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ Q LQ+ + L++ H +NPLAGC+P+++Q+P+ Y I + + Sbjct: 96 QSLKEKYSSKDAQTQQKLQQETMALFQKHGVNPLAGCFPLIVQMPILIGFYHAIVRTDAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSPPP 511 + F W DL ADP I P++ + F+Q K M P Sbjct: 156 KEDSFL-WF-DLGVADPYFIL-------------------PLVAGATTFLQQKIMMQGVP 194 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 M+L MP++ V SFPA L +YW N+ I+ Sbjct: 195 QQPQMQMMLYLMPIMIVIFAISFPAALSLYWVVGNIFMII 234 >gi|220933190|ref|YP_002510098.1| 60 kDa inner membrane insertion protein [Halothermothrix orenii H 168] gi|219994500|gb|ACL71103.1| 60 kDa inner membrane insertion protein [Halothermothrix orenii H 168] Length = 217 Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 125/232 (53%), Gaps = 25/232 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW I +L++ N V N+G+AI++ T+F+KLL +PL KQ S M+++QP++ Sbjct: 2 GWLTEIMTDTLILLN---NWVHNYGLAIIILTIFIKLLLYPLTAKQTKSMKAMQDLQPEM 58 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +++EK+K + + Q+ M++LY+ HN+NP AGC+P++LQ+ + + +++ IS Sbjct: 59 KKIQEKYKDNKEKQ-QEEMMKLYQEHNVNPAAGCFPMILQLFIIWPLFRAIS-------- 109 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYL--PGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 +KD+ A + + + L P + I I M ++ K + + Sbjct: 110 ----GLKDIMAPEEATFLWIGNLTEGSLATPDITLIIINVIAMIGQTYLTQKWT---GNN 162 Query: 515 GQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK---MHGA 562 Q + W MP + ++ PAG+++YW V++++QQ +I + M GA Sbjct: 163 SQNNAIMWVMPFIILWFGFKLPAGVLLYWLTQTVLTVIQQYIIYQDPEMKGA 214 >gi|315925607|ref|ZP_07921817.1| stage III sporulation protein J [Pseudoramibacter alactolyticus ATCC 23263] gi|315621148|gb|EFV01119.1| stage III sporulation protein J [Pseudoramibacter alactolyticus ATCC 23263] Length = 296 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 23/214 (10%) Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 YNLV ++G A++L T+ VK + PL KQ S M+ +QP+++ L++K+K +P + L Sbjct: 16 YNLVKDYGFAVILFTIIVKTIILPLNIKQTNSMREMQAVQPELNNLQKKYKNNPEK-LNA 74 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---------SLEMRHAPFWGWIKD 464 ++LYK +N+NP+AGC P+L+Q+P+ + ++ + +L A F+ WI + Sbjct: 75 ETMKLYKLYNVNPMAGCLPLLIQLPIIWGLFGALRSPAKYVFTNGNLSALRAGFY-WIPN 133 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L DP + +LP + W M A Q ++L MP Sbjct: 134 LGKPDP------YFVLPILCVVLTFITQW------YMMRFQDDGNKAAQSSQKVMLYVMP 181 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ + PAG+ +YW N + VQQ ++M+ Sbjct: 182 LMIGWFAVKMPAGVALYWVVQNAYTFVQQFLVMR 215 >gi|126701305|ref|YP_001090202.1| putative sporulation membrane protein [Clostridium difficile 630] gi|254977339|ref|ZP_05273811.1| putative sporulation membrane protein [Clostridium difficile QCD-66c26] gi|255102896|ref|ZP_05331873.1| putative sporulation membrane protein [Clostridium difficile QCD-63q42] gi|255308716|ref|ZP_05352887.1| putative sporulation membrane protein [Clostridium difficile ATCC 43255] gi|255316423|ref|ZP_05358006.1| putative sporulation membrane protein [Clostridium difficile QCD-76w55] gi|255519083|ref|ZP_05386759.1| putative sporulation membrane protein [Clostridium difficile QCD-97b34] gi|255652266|ref|ZP_05399168.1| putative sporulation membrane protein [Clostridium difficile QCD-37x79] gi|260685220|ref|YP_003216505.1| putative sporulation membrane protein [Clostridium difficile CD196] gi|260688879|ref|YP_003220013.1| putative sporulation membrane protein [Clostridium difficile R20291] gi|306521981|ref|ZP_07408328.1| putative sporulation membrane protein [Clostridium difficile QCD-32g58] gi|115252742|emb|CAJ70587.1| Sporulation membrane protein SpoIIIJ [Clostridium difficile] gi|260211383|emb|CBA67040.1| putative sporulation membrane protein [Clostridium difficile CD196] gi|260214896|emb|CBE07703.1| putative sporulation membrane protein [Clostridium difficile R20291] Length = 235 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 32/221 (14%) Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +++ + V ++GI+I+L T+ VK++ PL KQ ST M++IQP+I E++EK+K P Sbjct: 10 LILKVIFEFVNHYGISIILFTILVKIILLPLTIKQTKSTKAMQDIQPRIKEIQEKYKNKP 69 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV----ISISLEMRHAPFWG--- 460 + + +++LY INPL+GC P+L+Q P+ ++ V ++ + A F Sbjct: 70 EKQ-NEEIVKLYGEAKINPLSGCLPLLIQFPILIGLFSVLREPVAHGVFANKAAFLAADN 128 Query: 461 ---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 WIK L + P + +F Y+ +Q M+P +G Sbjct: 129 GFLWIKSLTS--PDYVLAVFSGASAYV------------------MQKVMTPKDQLQGSM 168 Query: 518 MILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAVIM 557 ++ ++ F FPAGL +YW+ SN+ SI Q +IM Sbjct: 169 KVMTYVMAGMSFYWGFIFPAGLTLYWTVSNLFSIAQYYLIM 209 >gi|229824628|ref|ZP_04450697.1| hypothetical protein GCWU000282_01975 [Catonella morbi ATCC 51271] gi|229785999|gb|EEP22113.1| hypothetical protein GCWU000282_01975 [Catonella morbi ATCC 51271] Length = 266 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 22/219 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ + + NL+G ++G+ I+L T+ + + PL K Q S M IQP+I Sbjct: 30 WDGYIIYPLSQFIIWLSNLLGGSYGLGIILFTIIILVALTPLTKMQMDSQFQMAEIQPEI 89 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +EL+++F ++ + LQ+A L K +N AGC P+L+Q+PV FA+Y+VI+ + + Sbjct: 90 EELKKQFPNRDRASMEALQQAQQDLMKERGVNQFAGCLPLLIQLPVMFALYQVITRTEVL 149 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R F W+ L ADP F LP V W S ++ +K +P Sbjct: 150 RDGHFL-WLA-LGKADPY----------FILPILAAVLTW-----YSSYLTVKANPIQNG 192 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +AM P + + +FPA + +YW SN + +VQ Sbjct: 193 ASKAMTYV-APAMILLVSFNFPAAVTLYWVVSNAVRVVQ 230 >gi|302798427|ref|XP_002980973.1| hypothetical protein SELMODRAFT_12954 [Selaginella moellendorffii] gi|300151027|gb|EFJ17674.1| hypothetical protein SELMODRAFT_12954 [Selaginella moellendorffii] Length = 313 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 121/228 (53%), Gaps = 30/228 (13%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L TV VK+L FPL K Q ST +M+N+QPK+ +++++ ++ Q +LY Sbjct: 65 YGFAIILLTVLVKVLTFPLTKSQAESTISMQNLQPKLKAIQQRYAGDQERI-QMETARLY 123 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAAADPTNIFT--- 475 K +NPLAGC P L +PV+ +Y+ +S ++ E + + WI LA PT I Sbjct: 124 KQAGVNPLAGCLPTLATLPVWIGLYRALSNVANEGLLSEGFFWIPSLAG--PTTIAARQS 181 Query: 476 ---LFGILPFYLPGFMHVG--------IWPIIMSLSMFIQMK-MSPP---PADKGQAMIL 520 + + PF + G +G + P+++ S + M+ M PP P+ K +IL Sbjct: 182 GSGISWLFPF-VDGHPPLGWGDTIAYLVLPVLLIGSQYASMQIMQPPQTDPSQKNTQLIL 240 Query: 521 NWMPVVFVFALSSFPAGLIIYW-------SWSNVISIVQQAVIMKMHG 561 ++P++ + S P+GL +YW + +++S QQ + K+ G Sbjct: 241 KFLPLMIGYFALSVPSGLSLYWLSTENRVANKHILSTGQQVWLRKLGG 288 >gi|326202768|ref|ZP_08192635.1| membrane protein insertase, YidC/Oxa1 family [Clostridium papyrosolvens DSM 2782] gi|325986845|gb|EGD47674.1| membrane protein insertase, YidC/Oxa1 family [Clostridium papyrosolvens DSM 2782] Length = 280 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 76/269 (28%), Positives = 132/269 (49%), Gaps = 50/269 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 F I +P+ + + YN + N+G+A+++ T+ ++ PL KQY S+A M+ +QP + Sbjct: 2 FDVIIRPLGQFLYWIYNTIAFHNYGLALVIFTIIIRAAMIPLTLKQYKSSAEMQKVQPLL 61 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E++ K+ + L + M++LY+ H INP GC P+L+Q+P+ ++++ I+ L+ Sbjct: 62 QEIQRKYANDKAK-LNEEMMKLYQEHKINPAGGCLPLLIQMPILLSLWQAITKPLKYMLG 120 Query: 457 PFWGWIKDLAAA---------DPTNIFTLF---------GILPFYLP--GF-MHVG---- 491 +K+LA A N T F G L + P GF +++G Sbjct: 121 FTPEQLKNLAEASNIPINSAYSEINTITHFMSIGQGSKVGNLNMFFPSHGFGINLGDIPT 180 Query: 492 ----------------IWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWM----PVVFVF 529 + PII +++ ++ ++MS P A DK + N M P++ + Sbjct: 181 WHFNKIMSEPKYAVLLLLPIIATITTYLSVRMSMPKATSDKAANPMGNSMMYVSPIMTLL 240 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL +YW NV +IVQQ + K Sbjct: 241 FSFQFPAGLALYWITGNVFAIVQQYYVNK 269 >gi|186503883|ref|NP_001118405.1| ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] gi|330253080|gb|AEC08174.1| inner membrane protein ALBINO3 [Arabidopsis thaliana] Length = 342 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 30/232 (12%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M +++ + + +G AI+L T+ VK +PL K+Q ST M+ Sbjct: 111 GWFGFISDAMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQ 170 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QPKI +++++ + ++ Q +LYK +NPLAGC P L IPV+ +Y+ +S + Sbjct: 171 NLQPKIKAIQQRYAGNQERI-QLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNV 229 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVG--------IWPI 495 + E + WI L PT+I + + PF + G +G + P+ Sbjct: 230 ANEGLFTEGFFWIPSLGG--PTSIAARQSGSGISWLFPF-VDGHPPLGWYDTVAYLVLPV 286 Query: 496 IMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 ++ S ++ M+ M PP PA K ++ ++P++ + S P+GL IYW Sbjct: 287 LLIASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYW 338 >gi|225181149|ref|ZP_03734595.1| 60 kDa inner membrane insertion protein [Dethiobacter alkaliphilus AHT 1] gi|225168118|gb|EEG76923.1| 60 kDa inner membrane insertion protein [Dethiobacter alkaliphilus AHT 1] Length = 220 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 124/212 (58%), Gaps = 13/212 (6%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ +F N+ GN+GIAI+L T+ ++L+ +PL KQ S M+ +QP++ +L+EK+K Sbjct: 11 ILMFFNNVTGNYGIAIILLTLLIRLVTWPLQNKQLTSAKAMQELQPELKKLQEKYKNDKE 70 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + L +A ++L+K H +NP A C P+L+Q+PV +A+++V+ + + F G ++ Sbjct: 71 K-LNQATMELWKEHKVNPAASCLPLLIQMPVLWAMFQVLRDQVTIADTMFLGMDMTVSVM 129 Query: 469 DPTNIFTLFGI--LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 D + LF + +YL II ++ F+Q KM +DK Q ++ MP++ Sbjct: 130 DLRELGLLFAATSIGYYL--------LVIISGVTTFLQQKMM--MSDKSQQAMMIMMPLM 179 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +F FPAGL++YW +N +SI Q +I K Sbjct: 180 LLFFSLQFPAGLVLYWVVNNSLSIGQHFLINK 211 >gi|30684018|ref|NP_850125.1| ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] gi|330253079|gb|AEC08173.1| inner membrane protein ALBINO3 [Arabidopsis thaliana] Length = 348 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 30/232 (12%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M +++ + + +G AI+L T+ VK +PL K+Q ST M+ Sbjct: 111 GWFGFISDAMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQ 170 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449 N+QPKI +++++ + ++ Q +LYK +NPLAGC P L IPV+ +Y+ +S + Sbjct: 171 NLQPKIKAIQQRYAGNQERI-QLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNV 229 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVG--------IWPI 495 + E + WI L PT+I + + PF + G +G + P+ Sbjct: 230 ANEGLFTEGFFWIPSLGG--PTSIAARQSGSGISWLFPF-VDGHPPLGWYDTVAYLVLPV 286 Query: 496 IMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 ++ S ++ M+ M PP PA K ++ ++P++ + S P+GL IYW Sbjct: 287 LLIASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYW 338 >gi|224107717|ref|XP_002314575.1| 60 kDa inner membrane protein [Populus trichocarpa] gi|222863615|gb|EEF00746.1| 60 kDa inner membrane protein [Populus trichocarpa] Length = 292 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 114/222 (51%), Gaps = 20/222 (9%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L TV VK FPL+KKQ S M+++QP+I +++++ ++ Q +LY Sbjct: 62 YGFAIILLTVLVKAATFPLSKKQVESAMAMRSLQPQIKAIQQRYAGDQERI-QLETARLY 120 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAA----ADPTNIF 474 K INPLAGC P L IPV+ +Y+ +S ++ E + WI LA A N Sbjct: 121 KLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTAIASRQNGS 180 Query: 475 TLFGILPFYLPGFMHVG--------IWPIIMSLSMFI-----QMKMSPPPADKGQAMILN 521 + + PF + G +G + P+++ +S +I Q S P K I Sbjct: 181 GISWLFPF-VDGHPPLGWSDTVAYLVLPVMLVVSQYISVQIMQSSQSDDPNVKNSQAITK 239 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P++ + S P+GL +YW +N++S QQ + K GA+ Sbjct: 240 FLPLMIGYFSLSVPSGLSLYWLTNNILSTAQQVWLQKSGGAK 281 >gi|306821796|ref|ZP_07455391.1| stage III sporulation protein J [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550163|gb|EFM38159.1| stage III sporulation protein J [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 260 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 121/230 (52%), Gaps = 35/230 (15%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---Q 405 ++ +FYN+ N+ ++I+L T+ K++ PL Q S + MK IQP+ID++ +K+K Q Sbjct: 11 ILEFFYNMTSNYALSIVLFTILTKIILLPLTISQMRSMSAMKLIQPEIDKINKKYKNDRQ 70 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG----- 460 ++L K LYK +NINP AGC P+L+Q+P+ A+Y VI ++ A Sbjct: 71 KQSELLSK----LYKDNNINPAAGCLPLLIQLPILTAMYSVIREPIKYVFANNEALYKTA 126 Query: 461 -----WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--- 512 W+K L D N+ + LPF I P++ ++ ++Q+KMS + Sbjct: 127 DIGFFWVKHLTDVDKINVGGM--DLPF---------ILPVMSAIFTYLQLKMSTARSSSD 175 Query: 513 -DKGQAMILN---WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + Q M N MP++ + FPAGL++YW ++ I+QQ I K Sbjct: 176 NEMAQGMSKNMSVMMPIMMLIWGVMFPAGLMLYWVTGTIVQIIQQYFIGK 225 >gi|294674133|ref|YP_003574749.1| inner-membrane protein, 60 kDa [Prevotella ruminicola 23] gi|294471953|gb|ADE81342.1| inner-membrane protein, 60 kDa [Prevotella ruminicola 23] Length = 587 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 87/345 (25%), Positives = 165/345 (47%), Gaps = 34/345 (9%) Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDGHARYQAKFSANE 293 S+ + N E+ W+ ++++++ I E + +S + + Y +F+A Sbjct: 197 SETSEKIDENIDEALDWVAFKNQFFSAALIAKDEFAANSLLTSIPQQKGSGYLKQFNAKL 256 Query: 294 ITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWF-------YFI 342 T T F ++ G +F I E+ A + E L++ GW+ +F Sbjct: 257 KTAFDPTGAKATEFEMYIGPNDFRLIKDVEQQSAFGKDLDLEQLVNLGWWLVRWINRWFT 316 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 L S+ +++ GI ++L T+ +K++ FP+ KK Y+S+A M+ ++PK+DE ++ Sbjct: 317 IYVFDWLTSWGFSM----GIVLILITLLLKVITFPMVKKSYMSSAKMRVLKPKLDEATKQ 372 Query: 403 FKQSPPQV-LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + + Q+ Q+AM+QLY + ++PL GC P+L+Q P++ A++ + ++++R F W Sbjct: 373 YDKPEDQMKKQQAMMQLYSQYGVSPLGGCLPMLIQFPIWMAMFFFVPNAIQLRRESFL-W 431 Query: 462 IKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 I DL+ DP T I+ + L F + M++ Q + Q Sbjct: 432 ISDLSTYDPIIEWGTQIWGIGDHLSLTCILFCVANVLYSYMTMR---QQRDQMVGQQAEQ 488 Query: 517 AMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ W MPV+F F + + +GL Y+ IS+ A IM Sbjct: 489 MKMMQWMMYLMPVMFFFMFNDYSSGLNFYY----FISLFFSAAIM 529 >gi|298373472|ref|ZP_06983461.1| inner membrane protein OxaA [Bacteroidetes oral taxon 274 str. F0058] gi|298274524|gb|EFI16076.1| inner membrane protein OxaA [Bacteroidetes oral taxon 274 str. F0058] Length = 633 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/319 (22%), Positives = 159/319 (49%), Gaps = 24/319 (7%) Query: 251 WLGISDKYWASVFIPSKETSFHS---QFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 W D +++++ + +T F + + SD +++Y ++ + + TN Sbjct: 265 WFAAKDHFFSTILM--SKTGFATANLSSEIYSDENSKYLKNYTVHSVINFDATGNKPTNL 322 Query: 308 -LFAGAKEFPTIHHYEKDL---AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF--- 360 L+ ++ + + L P + LI GW F + ++ F NL+G+F Sbjct: 323 QLYFVPNQYKVLAGFNDGLDKAQRPNLQELIPLGWTLFRWVNKYAIIPLF-NLLGSFMSS 381 Query: 361 -GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 G+ I++ TV +K++ PL K Y+S+A M+ ++P++D + E+ Q+A + LY Sbjct: 382 WGLIILIVTVIIKIVLLPLTFKSYMSSAKMRVLKPQVDAINERIPADKMMERQQAQMSLY 441 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 ++ ++P+ GC P++LQ+P+ A++ + + E+R F W DL+ D T Sbjct: 442 RSVGVSPMGGCLPMILQMPILVAVFMYLPSAFELRQQSFL-WATDLSTFDTLPFLTWNTA 500 Query: 480 LPFYLPGFMHVGIWPIIMSLS--MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSS 533 +PF H+ ++ ++M+++ ++ ++ M+ Q ++ W MP++F F + Sbjct: 501 IPFIGK---HISLFCLLMTITNVIYTKVNMAATAGSNQQMAMMKWMMYLMPLMFFFIFNE 557 Query: 534 FPAGLIIYWSWSNVISIVQ 552 + +GL Y+ S +++++Q Sbjct: 558 YASGLTYYYFVSLLLTVLQ 576 >gi|308801639|ref|XP_003078133.1| putative PPF-1 protein (ISS) [Ostreococcus tauri] gi|116056584|emb|CAL52873.1| putative PPF-1 protein (ISS) [Ostreococcus tauri] Length = 455 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 115/220 (52%), Gaps = 21/220 (9%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G +I+L TV VKL FPL+K+Q S+ M+ +QP+I EL+ + P+ LQ +L Sbjct: 134 SYGYSILLLTVLVKLATFPLSKQQVESSIQMQAMQPRIKELQAMYAND-PERLQLEQARL 192 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA--------PFWGWIKDLAAADP 470 Y+ NPLAGC P+ +PVF +Y+ +S + H P G +AA + Sbjct: 193 YREAGFNPLAGCLPLFATLPVFIGLYRALS-NAAAEHLLDDGFYWIPSLGGPTSIAARND 251 Query: 471 TNIFT-LFGILPFYLP-GFMHVGIW---PIIMSLSMFIQMKMSPP------PADKGQAMI 519 N F L+ + + P G+ G + P+++ +S F+ + P PA + I Sbjct: 252 GNGFAWLWPFVDGHPPLGWYETGCYLVLPVLLVVSQFVSQTIISPQPKTDDPAQQQSQAI 311 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 L ++P + F + PAGL +YW ++N+I+ Q V+ K+ Sbjct: 312 LKFLPFMIGFFSLNVPAGLTLYWFFNNIITTAQTVVLRKI 351 >gi|227536313|ref|ZP_03966362.1| inner membrane protein translocase component YidC [Sphingobacterium spiritivorum ATCC 33300] gi|227243828|gb|EEI93843.1| inner membrane protein translocase component YidC [Sphingobacterium spiritivorum ATCC 33300] Length = 389 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 116/218 (53%), Gaps = 15/218 (6%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I P+F + F+ ++GI I++ T+ +K + FPL K Y S A M+ ++P++DE++ Sbjct: 137 ITVPVFNFLDGFHM---SYGIVILILTILLKGVLFPLTYKSYQSMAKMRVLKPQLDEIKA 193 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K + +LQ+ ++LYK +NPL GC P++LQ+P A + E+R F W Sbjct: 194 KVGEDNAVLLQQEQMKLYKQAGVNPLGGCLPLVLQMPFTIAFFYFFPNLFELRGESFL-W 252 Query: 462 IKDLAAAD-PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM-KMSPPPADKGQAMI 519 +KDL+ D P +FGI HV + ++M+L+ + + GQ Sbjct: 253 VKDLSTYDSPITFPAIFGI--------DHVSLMCVLMTLTTLLTTWYNNATSGATGQMKY 304 Query: 520 LNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + + MP++F F L+SFPAGL Y+ V + + Q +I Sbjct: 305 IGYFMPLIFFFVLNSFPAGLNYYYFLGAVFTFLTQLLI 342 >gi|229082700|ref|ZP_04215147.1| Membrane protein oxaA 1 [Bacillus cereus Rock4-2] gi|228700612|gb|EEL53151.1| Membrane protein oxaA 1 [Bacillus cereus Rock4-2] Length = 178 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 29/179 (16%) Query: 381 KQYVSTANMKNIQPKIDELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 KQ ST M+ +QP++ +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+ Sbjct: 3 KQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFIQM 62 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 P+ FA Y I + E++ F W DL AD PFY I P++ Sbjct: 63 PILFAFYHAIMRTAEIKQHSFL-WF-DLGHAD-----------PFY--------ILPVVA 101 Query: 498 SLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +++ FIQ K++ GQ AM+L MP++ + +FPA L +YW N+ I Q Sbjct: 102 AITTFIQQKLA-MAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQ 159 >gi|206896386|ref|YP_002247364.1| membrane protein OxaA 1 [Coprothermobacter proteolyticus DSM 5265] gi|206739003|gb|ACI18081.1| membrane protein OxaA 1 [Coprothermobacter proteolyticus DSM 5265] Length = 221 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 26/217 (11%) Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 M++++ Y++V N+ + I+L T+ +KL+ PL +Q ++ + IQ ++ E+ +K+K P Sbjct: 11 MILNWLYSVVPNYPVDIILMTILLKLILEPLTYQQLRTSFVISRIQGELQEIAKKYKNDP 70 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q Q+ ++YK H +NPL GC LLQIP+FF +Y + + + PF W+ D++ Sbjct: 71 QQAAQEQS-KIYKEHGVNPLIGCLLPLLQIPIFFGLYGSLVQNPNFKGLPFL-WVPDISK 128 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP----PADKGQAMILNWM 523 DPT I I M + + Q K + PA + Q ++ W+ Sbjct: 129 PDPTWITV-------------------IAMVVVTYFQFKFTSQATTDPAMQRQQNMMMWI 169 Query: 524 PVVFV-FALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 V+ + + SFP G+ +YW ++ISI++ +I KM Sbjct: 170 FVIMIGWIARSFPFGVALYWMAFSLISILESFIIRKM 206 >gi|38372239|sp|Q8LKI3|ALB32_CHLRE RecName: Full=Inner membrane ALBINO3-like protein 2, chloroplastic; Flags: Precursor gi|21361062|gb|AAM49792.1|AF514291_1 albino 3-like protein [Chlamydomonas reinhardtii] Length = 422 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 112/212 (52%), Gaps = 23/212 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G AI+ TV VK+ FPL +KQ ST +++ +QP++ EL+ K+ P+ LQ +L Sbjct: 100 SYGFAIIALTVLVKVATFPLTQKQVESTLSLQALQPRVKELQAKYADD-PENLQLETARL 158 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 YK +NPLAGC+P L IPVF +Y +S + E + WI L PT T+ Sbjct: 159 YKEAGVNPLAGCFPTLATIPVFIGLYNALSNAAKEGLLTEGFFWIPSLGG--PT---TIG 213 Query: 478 GILPFYLP---GFMHVG--------IWPIIMSLSMFIQMKM-----SPPPADKGQAMILN 521 G L + +P G VG + P+++ S + K+ + P+ + IL Sbjct: 214 GGLEWLVPFENGAPPVGWANAAAYLVMPVLLVASQYASQKIISSQNNQDPSQQQAQAILK 273 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++P++ + + P+GL +YW +N++S QQ Sbjct: 274 FLPLMIGWFSLNVPSGLTLYWFVNNLLSTGQQ 305 >gi|256425563|ref|YP_003126216.1| hypothetical protein Cpin_6611 [Chitinophaga pinensis DSM 2588] gi|256040471|gb|ACU64015.1| 60 kDa inner membrane insertion protein [Chitinophaga pinensis DSM 2588] Length = 617 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 96/356 (26%), Positives = 166/356 (46%), Gaps = 57/356 (16%) Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF- 289 + Y +++++ + W+ + +++ + FI K+ F+ A AK Sbjct: 239 KHDYFTLQRTTHEKWDNQLQWVSVKQQFFNTTFIARKDAHFNG---------AEVNAKVP 289 Query: 290 -SANEITILPGKSITTTNF-------------LFAGAKEFPTIHHYEKDLA--IPRFEML 333 SAN + G++ TT ++ G + T+ ++ L IP Sbjct: 290 ESANIV----GQTFTTLEIPYNRAHDFTFPIEIYYGPNHYSTLKSFDNGLESIIP----- 340 Query: 334 IDWGWFYFIAK-------PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 + G F F+ P+F +S F +GN+G+ I+L T+F++LL P + YVS Sbjct: 341 LGSGIFAFVKYVNKWIIIPVFNFLSGF---IGNYGLIIILLTIFIRLLIAPFTYQSYVSQ 397 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A MK ++P+ID L+ K Q ++L+++ +NPL GC P L+Q+P+ A+Y Sbjct: 398 AKMKVLKPEIDALKAKHGDD-QQAFGVEQMKLFRSAGVNPLGGCLPALMQLPILVAMYSF 456 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 S+E+R F W DL+A D +I L +PFY HV ++ ++M+ + + Sbjct: 457 FPSSIELRQESFL-WATDLSAYD--SILNLPFTIPFY---GNHVSLFTLLMTATSLMLAF 510 Query: 507 MSPPPADKGQAMILNWMPVVFVFAL----SSFPAGLIIYWSWSNVISIVQQAVIMK 558 + AD+ ++ +MP VF L + + L Y+ SNVISI Q I K Sbjct: 511 NNRGMADQSNP-VMKYMPYVFPIMLLGIFNRLASALTFYYFLSNVISIGLQWAIQK 565 >gi|312129338|ref|YP_003996678.1| membrane protein insertase, yidc/oxa1 family [Leadbetterella byssophila DSM 17132] gi|311905884|gb|ADQ16325.1| membrane protein insertase, YidC/Oxa1 family [Leadbetterella byssophila DSM 17132] Length = 611 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 93/355 (26%), Positives = 170/355 (47%), Gaps = 42/355 (11%) Query: 231 EQKYSDIEKSSISNFHESNS----WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 E+ + D+ +S SN +E W KY+ S + E SF + K+ + Sbjct: 225 EENFEDLGGNSTSNANEEAELPVKWFSFHQKYFTSGIV--FENSFFQKAKFNMETP---- 278 Query: 287 AKFSANEITILPGKSITTTNFL-FAGAKEFPTIHHY-----EKDLAIPRFEMLIDWGWFY 340 +A+E + G + + F G K + +Y K+L ++ + Y Sbjct: 279 ---TADESVVKIGTATAEIAYADFIGNK--TSFKYYFGPNELKELKAVGYDFQKNLYLGY 333 Query: 341 FIAKPM-----FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 I KP+ L ++ + V N+G+ I++ + +KL+ PL K Y+S+A M+ + P+ Sbjct: 334 DIVKPINRYIFVPLFTWVESFVSNYGLLIIVVVLIIKLVLTPLIYKSYMSSAKMRVLAPE 393 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I+ ++EK P + LQ+ ++LY+ +NPL+GC P+LLQ+P+ +++ + + R Sbjct: 394 INAIKEKVGDDPVK-LQQETMKLYQQVGVNPLSGCIPLLLQMPILMSVFFLFPNLVMFRQ 452 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-------QMKMS 508 F W KDL+ D N+ + +P H+ ++ ++M++S Sbjct: 453 KEFL-WAKDLSTYD--NLISWGFNMPIL---GNHLSLFVVLMTISSLAFTYYNNQNTPDQ 506 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P P D + + PVVF+F L+SFPA L Y+ SN+++I QQ ++ + E Sbjct: 507 PGPVDMKKISYI--FPVVFMFVLNSFPAALSFYYLVSNLVTIAQQLIVKRFVNEE 559 >gi|325284198|ref|YP_004256739.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus proteolyticus MRP] gi|324316007|gb|ADY27122.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus proteolyticus MRP] Length = 576 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 86/291 (29%), Positives = 136/291 (46%), Gaps = 35/291 (12%) Query: 280 DGHARYQAKFSANEITILP-GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 +G R A+ + +L G S ++ ++ G E IH K + D W Sbjct: 286 EGGTRVDAQMTGGSNALLTLGLSGNSSVDVYGGRNEL--IHL--KQTGFYGMPGVFDPNW 341 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F I+ + LM + LVG++GI I+L V ++L+ +P+ + Q +TA M+ +QPK+ E Sbjct: 342 FGHISLAIVSLMELLHRLVGDWGIVILLIAVLLRLVMWPVMQAQARTTAKMQVLQPKMKE 401 Query: 399 LREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++++K + + +Q M LYK HN NP AGC L +PV A++ I + E Sbjct: 402 IQDRYKDAKDLESQRAMQMEMAALYKEHNFNP-AGCLSSFLPLPVLIALWSTIR-NFEFD 459 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILP-FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + W+ DLA DP ILP YL I+++ P Sbjct: 460 SG--FLWMPDLAIPDP------LWILPALYL-----------IVNMGQLWVSTRRTPEMF 500 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 K QA +M + FV+ FPAG+ IY S I I+QQ ++ K E+ Sbjct: 501 KQQA----FMYLFFVYFALIFPAGVSIYLIISTAIGILQQFIVNKQVEVEL 547 >gi|294668108|ref|ZP_06733215.1| membrane protein insertase, YidC/Oxa1 family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309816|gb|EFE51059.1| membrane protein insertase, YidC/Oxa1 family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 150 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/135 (40%), Positives = 79/135 (58%), Gaps = 19/135 (14%) Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y++ INPL GC P+LLQIP+F +Y I S+E+R AP+ GWI DL+ DP I Sbjct: 11 YRSEKINPLGGCLPMLLQIPIFIGLYWAIFSSVELRQAPWLGWITDLSRHDPWFIL---- 66 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 P++M+ +M+ Q ++PPP D QA ++ MP VF F FPAGL Sbjct: 67 ---------------PVLMTATMWFQTTLNPPPTDPMQAKMMKIMPFVFSFMFFLFPAGL 111 Query: 539 IIYWSWSNVISIVQQ 553 ++Y+ +N+++I QQ Sbjct: 112 VLYYVVNNLLTIAQQ 126 >gi|269216520|ref|ZP_06160374.1| inner membrane protein OxaA [Slackia exigua ATCC 700122] gi|269130049|gb|EEZ61131.1| inner membrane protein OxaA [Slackia exigua ATCC 700122] Length = 254 Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 125/213 (58%), Gaps = 8/213 (3%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F + +FYN+VG++G+AI++ TV +++ P+ KQ S+ M+ +QP ++E++ KF Sbjct: 9 IFACVQFFYNIVGDWGLAIIIITVIFRIIVAPIMHKQSKSSYQMQKMQPLMNEIQTKFAD 68 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--ISLEMRHAPFWGWIK 463 P + +Q+ M ++Y NPLAGC P+LLQ+P+F A+++ + S E F+G + Sbjct: 69 DPTR-MQEEMQKMYAETKFNPLAGCLPMLLQMPIFMAMFQTLRNIGSYEDTSYTFYGLVP 127 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL AA P+ +F+ GI F +P + + ++ + + M +Q + + Q +I+ + Sbjct: 128 DLTAA-PSTMFSQ-GIGAF-IPYLILMLVFALATFMPMILQ-NIKNDSKQRNQMLIMGVI 183 Query: 524 PVVFVFALS-SFPAGLIIYWSWSNVISIVQQAV 555 V + +S PAG++++W S++ I QQ + Sbjct: 184 MTVMMLWISWGSPAGVLLFWGVSSIFGIAQQQL 216 >gi|309390347|gb|ADO78227.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium praevalens DSM 2228] Length = 216 Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 110/212 (51%), Gaps = 21/212 (9%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + YN+VGN+G AI++ T+ +K+ +PL KQ S M+ IQP++ +++ K++ + Sbjct: 13 LDFIYNIVGNYGSAIIIFTLLIKIALYPLTAKQTRSMREMQEIQPEMKKIQNKYEDDKEK 72 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPF-W-GWIKDLA 466 Q+ M++LY+ H +NP AGC P+++Q+ + +Y+ I ++ +M F W G I + + Sbjct: 73 Q-QEEMMKLYQEHGVNPAAGCLPMIVQMAILIPLYRTIFALGDKMASEAFLWIGTITNGS 131 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 A+P L +IM + K+S + M + MP+ Sbjct: 132 LAEPDIAIVLLN---------------AVIMLGQTHMTQKLSGGEGKSNKMMYM--MPLF 174 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +F P+G+++YW S + ++ QQ + K Sbjct: 175 IIFIGFRLPSGVLLYWFTSTLFTVAQQYFLSK 206 >gi|302390793|ref|YP_003826614.1| membrane protein insertase, YidC/Oxa1 family [Thermosediminibacter oceani DSM 16646] gi|302201421|gb|ADL08991.1| membrane protein insertase, YidC/Oxa1 family [Thermosediminibacter oceani DSM 16646] Length = 209 Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 113/216 (52%), Gaps = 33/216 (15%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ + + ++G+AI++ T +KL+ P + +Q+ S M+ I P +L+EK+K Sbjct: 11 ILDFLFLYTKSYGVAIIVLTALIKLVLLPFSFQQFQSIKKMQEIAPLQKKLQEKYKNDKE 70 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF----WGWIKD 464 + L + +++LY+ + +NP+ GC P+L+Q P A++ + ++H F + WI D Sbjct: 71 K-LNRELLKLYQENKVNPMGGCLPLLIQFPFIIALFSL------LQHHNFGNEGFLWIAD 123 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--PADKGQAMILNW 522 L A D T + P++ +++ ++ K+ P P + +M L Sbjct: 124 LGAPDRTFVL-------------------PLLAAVTTYVSSKIGMPQNPDNPQSSMNLIM 164 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+ AL FP+GL +YW SN+I I+QQ +IM+ Sbjct: 165 SAVIGWMAL-KFPSGLALYWVVSNLIQILQQVIIMR 199 >gi|89101258|ref|ZP_01174079.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911] gi|89084023|gb|EAR63203.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911] Length = 244 Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 118/222 (53%), Gaps = 28/222 (12%) Query: 338 WFYFIAKPMFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ M ++ L G++G+AI++ T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 22 WNEYIVYPLSMFIVKVAETLGGSYGLAIIVVTLIIRLLILPLMIKQTKSSKAMQALQPEM 81 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q Q LQ+ + L++ H +NPLAGC+P+++Q+P+ Y IS + E+ Sbjct: 82 QKLREKYSSKDQKTQQKLQQETMALFQQHGVNPLAGCFPLIVQMPILIGFYHAISRTREI 141 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPA 512 + F W DL + DP + P+I + FIQ K M A Sbjct: 142 ANHDFL-WF-DLGSPDPIYLL-------------------PLIAGATTFIQQKIMMAGTA 180 Query: 513 DKG--QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ AM+L MPV+ + +FPA L +YW N+ IVQ Sbjct: 181 NQNPQMAMMLWIMPVMIIVFAINFPAALSLYWVVGNIFMIVQ 222 >gi|169334989|ref|ZP_02862182.1| hypothetical protein ANASTE_01395 [Anaerofustis stercorihominis DSM 17244] gi|169257727|gb|EDS71693.1| hypothetical protein ANASTE_01395 [Anaerofustis stercorihominis DSM 17244] Length = 249 Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 68/230 (29%), Positives = 126/230 (54%), Gaps = 35/230 (15%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ + YN VG++G+AI+L +F KL+ P++ KQ ST MK I P++ +++EKFK Sbjct: 6 VLLFIYNFVGSYGLAIILFALFAKLILLPISYKQIKSTQIMKVINPEVQKVQEKFKNDKA 65 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-----ISLE-MRHAPF-WGW 461 + ++ M ++Y+ +N NP++GC P+ LQ P+ ++ VI + ++ M+H + W Sbjct: 66 KQGEE-MWKVYEKYNYNPMSGCLPLFLQFPIIIGLFGVIRQPEAYVFIDGMKHVSMSFLW 124 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--- 518 IKD++ + +I G F LP F+ + I P+I ++ +IQ K + A++ M Sbjct: 125 IKDISVSA-LDIARANG---FALPTFLAM-IIPLINVIATYIQQKQA--TANQATEMGGT 177 Query: 519 ----------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ WM + +FP L IYW+ + ++ I+Q ++ K Sbjct: 178 MQMMNNMMTLMIGWMSL-------TFPGALSIYWASTTILGILQTEIMYK 220 >gi|261879826|ref|ZP_06006253.1| inner membrane protein OxaA [Prevotella bergensis DSM 17361] gi|270333484|gb|EFA44270.1| inner membrane protein OxaA [Prevotella bergensis DSM 17361] Length = 636 Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 123/548 (22%), Positives = 244/548 (44%), Gaps = 73/548 (13%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF--AELDYVS 128 V LKN L + + KGAQ ++ Y +++ VTL Y A+ +S Sbjct: 85 VVLKNDKLELTFSTKGAQVKKAVVKNYKDNITEKKD-VTLFQGDEQSIEYMLVAKEANIS 143 Query: 129 TAN----NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 TA+ E+ +S V+ +G T I++++ SL + YL ++ Sbjct: 144 TADLFFQTSEVTDSTVVFTAEAGAGKT----IRMIY------------SLGDSYLLRMKF 187 Query: 185 TVTNNSIDQIRFSPRGRIM----RHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 V+ + F+P M + K + F + + + +S Y + Sbjct: 188 QVSGMAG---LFAPNTSTMAINWQDKVRQQEKGFAFEARYATLTYHESDGGTDYLNASNE 244 Query: 241 SI-SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDGHARYQAKFSANEITILP 298 I ES W+ ++++++V I ++ + + + Y ++ A + Sbjct: 245 KIDEEIKESIDWVAFKNQFFSAVMIAKDNLGTNTLMTSIPQEKGSGYLKQYQAKMKSFFD 304 Query: 299 GKSITTTNFLFA-GAKEFPTIHHYEKDLAIPR---FEMLIDWGWFYFIAKPMFMLMS--- 351 T T F F G +F + E++ A + E L+ GW P+F +++ Sbjct: 305 PTGNTPTEFEFYYGPNDFRLLQSVEEESAFGKDLQMERLVYLGW------PLFRIINRWF 358 Query: 352 --YFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 Y ++ + + GI ++L T+ +K + +P+ KK Y+S+A M+ ++PK+D ++F + Sbjct: 359 TIYVFDWLSKWFPMGIVLILITLLLKAITYPMVKKSYMSSAKMRVLKPKLDAATKQFDKP 418 Query: 407 PPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q+ Q+AM+ Y + ++PL+GC P+L+Q P++ A++ + ++++R F W+ DL Sbjct: 419 EDQMQKQQAMMAEYAKYGVSPLSGCLPMLIQAPIWIAMFNFVPNAIQLRGESFL-WMDDL 477 Query: 466 AAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-I 519 + DP TN++ + L L + G I +M QM+ + + M + Sbjct: 478 STYDPILQWNTNLWLIGDHLS--LTCILFCGAQIIYSWFTM--QMQKDQMVGQQAEQMKM 533 Query: 520 LNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM---KMHGAEIGLIDRLRS 572 + W MP++F F + + +GL Y+ +S++ A IM + E L+ L + Sbjct: 534 MQWMMYLMPLMFFFIFNDYSSGLNFYY----FVSLIMSAAIMFVLRKTTNEEKLLAILEA 589 Query: 573 TFSKNYNS 580 + +N N+ Sbjct: 590 RYKENQNN 597 >gi|228470855|ref|ZP_04055702.1| putative membrane protein [Porphyromonas uenonis 60-3] gi|228307422|gb|EEK16432.1| putative membrane protein [Porphyromonas uenonis 60-3] Length = 626 Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 93/357 (26%), Positives = 176/357 (49%), Gaps = 54/357 (15%) Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET-------SFHSQFK---YLSDG 281 +K + + + + E W+ + DK++++V I +T SF ++ K Y+ D Sbjct: 235 EKLKETKMTQEKDVREKIQWVAMKDKFFSTVLIGLGDTRLEENKMSFTTEPKETNYIKD- 293 Query: 282 HARYQAKFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 +YQ F+ + I G+ NF LF G ++ + D + + + L D Sbjct: 294 -CKYQGAFAMD---IRDGRK---ANFALFMGPLDYNMLKSI--DAGVDKAQRL-DLKRMI 343 Query: 341 FIAKPMFM---------LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 ++ +F L+++ + N+GI I+L T+ +KL+ PL K Y+S A M+ Sbjct: 344 YVGGSLFRWINVTLIRPLINFLQGFISNWGIIILLLTIIIKLVLSPLTFKSYLSQAKMRV 403 Query: 392 IQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 ++P+++ + K+ Q++ K A +QLY+ +P++GC P+LLQ+P A+Y Sbjct: 404 LKPQVEAINAKYAGDDQQMMMKRSQATMQLYRNAGASPMSGCLPMLLQMPFLIALYMFFP 463 Query: 449 ISLEMRHAPFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 ++++R F W+KDL+ DP T+I + G+L G H+ ++ ++ +++ I Sbjct: 464 TAIDLRGESFL-WVKDLSTYDPIISWSTDIPFITGLL-----GGNHISLFCLLWAVTNII 517 Query: 504 ----QMKMSPPPADKGQAMILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M MS A Q ++ +MP ++F +S AGL Y+ S +I+I+Q Sbjct: 518 YSRYTMSMS-GGASGSQMKMMRFMPYMMTIMFFIFFNSNAAGLTYYYFISTLITILQ 573 >gi|296131544|ref|YP_003638794.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas flavigena DSM 20109] gi|296023359|gb|ADG76595.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas flavigena DSM 20109] Length = 384 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 123/221 (55%), Gaps = 28/221 (12%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPP---QVLQKAM 415 +G++I+ + +++L PL KQ ++ M+ +QP++ L++K+K +S P + + + M Sbjct: 39 WGLSIVGLVIVMRILLIPLFFKQIKASRGMQLVQPEMQALQKKYKGKSDPASREAMSREM 98 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKV------ISISLEMRHAPFWGWIKDLAA-A 468 ++LY+ H NP A C PILLQ P+FFA+++V ++ R ++LAA A Sbjct: 99 MELYRKHGTNPFASCLPILLQSPIFFALFRVLFELPRLAAGTYERADAIGPMTRELAAQA 158 Query: 469 DPTNIFT--LFGILPFYLPGFMHVGIWPII----MSLSMF-----IQMKMSPPPADKG-- 515 + I+ L G G +H+ I +I MS++ F + MK PP A +G Sbjct: 159 EAATIWGAPLSGTF-LKADGNVHIQIVTVILIIAMSVTTFTTQRQLTMKNMPPAALEGPM 217 Query: 516 ---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 Q ++L +P++F F+ +FP G+++YW+ +N+ S+ QQ Sbjct: 218 AQQQKILLYMLPLIFAFSGVNFPIGVLLYWTTTNLWSMGQQ 258 >gi|163119737|ref|YP_081441.2| OxaA-like protein [Bacillus licheniformis ATCC 14580] gi|145903248|gb|AAU25803.2| SpoIIIJ protein involved in stage III sporulation [Bacillus licheniformis ATCC 14580] Length = 266 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 113/223 (50%), Gaps = 30/223 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L++Y NL NFG+AI++ T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 38 WNTYIVYPLSQLITYVANLTNENFGLAIIIVTILIRLLILPLMIKQTKSSKAMQALQPEM 97 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q Q LQ+ + L + H +NPLAGC+PIL+Q+P+ Y I + E+ Sbjct: 98 QKLREKYSSKDQKTQQKLQQETMALMQKHGVNPLAGCFPILIQMPILIGFYHAIMRTREI 157 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SP 509 H+ W DL DP I PI+ + FIQ K+ Sbjct: 158 AEHSFLWF---DLGERDPYFIL-------------------PILAGVFTFIQQKLMMAGT 195 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + AM+L MP++ V SFPA L +YW N+ I Q Sbjct: 196 AQQNPQMAMMLWLMPIMIVVFAISFPAALSLYWVVGNLFMIAQ 238 >gi|327438165|dbj|BAK14530.1| preprotein translocase subunit YidC [Solibacillus silvestris StLB046] Length = 260 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 28/229 (12%) Query: 338 WFYFIAKPMFMLMSYFYNL----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 W +I P+ + F ++ N+ AI++ TV ++L+ PL KQ S+ M+ +Q Sbjct: 36 WNEYIVWPLVSFIKLFADMFEGNAANYAFAIIIVTVIIRLIILPLTIKQVKSSKKMQEMQ 95 Query: 394 PKIDELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 PK+ EL+ K+ + Q Q+ M+QL +T +NPLAGC PIL+Q+P+ Y IS Sbjct: 96 PKLKELQAKYSSKDAATQQKYQQEMMQLMQTSGVNPLAGCLPILIQMPILIGFYHAISRM 155 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 A G + A+P+ +F + L Y+ + M+ P Sbjct: 156 NATPDAFELGTFLAVPLAEPSIVFAVIAGLIQYV--------------------VLMTGP 195 Query: 511 PADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q I+ + MP++ V PA L +YW N +S++Q VI K Sbjct: 196 AVDNPQMKIMMYIMPLMIVGFGIILPAALSLYWVVGNFVSVLQNLVIYK 244 >gi|52788049|ref|YP_093878.1| OxaA-like protein precursor [Bacillus licheniformis ATCC 14580] gi|319648516|ref|ZP_08002732.1| SpoIIIJ protein [Bacillus sp. BT1B_CT2] gi|52350551|gb|AAU43185.1| SpoIIIJ [Bacillus licheniformis ATCC 14580] gi|317389595|gb|EFV70406.1| SpoIIIJ protein [Bacillus sp. BT1B_CT2] Length = 265 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 113/223 (50%), Gaps = 30/223 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L++Y NL NFG+AI++ T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 37 WNTYIVYPLSQLITYVANLTNENFGLAIIIVTILIRLLILPLMIKQTKSSKAMQALQPEM 96 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q Q LQ+ + L + H +NPLAGC+PIL+Q+P+ Y I + E+ Sbjct: 97 QKLREKYSSKDQKTQQKLQQETMALMQKHGVNPLAGCFPILIQMPILIGFYHAIMRTREI 156 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SP 509 H+ W DL DP I PI+ + FIQ K+ Sbjct: 157 AEHSFLWF---DLGERDPYFIL-------------------PILAGVFTFIQQKLMMAGT 194 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + AM+L MP++ V SFPA L +YW N+ I Q Sbjct: 195 AQQNPQMAMMLWLMPIMIVVFAISFPAALSLYWVVGNLFMIAQ 237 >gi|260887480|ref|ZP_05898743.1| stage III sporulation protein J [Selenomonas sputigena ATCC 35185] gi|330840118|ref|YP_004414698.1| membrane protein insertase, YidC/Oxa1 family [Selenomonas sputigena ATCC 35185] gi|260862767|gb|EEX77267.1| stage III sporulation protein J [Selenomonas sputigena ATCC 35185] gi|329747882|gb|AEC01239.1| membrane protein insertase, YidC/Oxa1 family [Selenomonas sputigena ATCC 35185] Length = 222 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 116/216 (53%), Gaps = 25/216 (11%) Query: 342 IAKPMFML--MSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 IA FML + F L+G N+GIAI+L T+ +K+ +PL KQ S M+ +QPK+ Sbjct: 12 IAVIQFMLENLYAFTGLLGFENYGIAIILLTILIKVCLYPLTVKQVRSMKGMQELQPKMK 71 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+EK+K + PQ++Q+ + +LYK +NPLAGC P+L+Q+P+ ++ + P Sbjct: 72 KLQEKYKDN-PQMMQQKIGELYKEAGVNPLAGCLPLLIQMPILMGMFYALQ-GYAYSGTP 129 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W+ L+ DP I P++ +LS + K + ++ Sbjct: 130 SFLWLASLSEPDPHYIL-------------------PVLSALSTWFVQKQTSTETNQQMK 170 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +++ MP+ + +F +GL++YW N++ IVQQ Sbjct: 171 IMMIVMPIFIGWISLNFASGLVLYWVTMNLVQIVQQ 206 >gi|167462794|ref|ZP_02327883.1| 60 kDa inner membrane insertion protein [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381370|ref|ZP_08055373.1| OxaA-like protein precursor [Paenibacillus larvae subsp. larvae B-3650] gi|321154946|gb|EFX47217.1| OxaA-like protein precursor [Paenibacillus larvae subsp. larvae B-3650] Length = 271 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/223 (31%), Positives = 131/223 (58%), Gaps = 28/223 (12%) Query: 334 IDWGWF--YFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ G+F YFI P+ + +F + GN +GI+I++ T+ ++ + PL KQY S+ M+ Sbjct: 31 VNGGFFTKYFIY-PLSWSLDWFAGVFGNSYGISILILTIIIRFIVLPLTLKQYRSSKRMQ 89 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 IQP+I +L++K+K + PQ Q+ ++L++ H +NPLAGC P+L+Q+P+ A+Y+ I + Sbjct: 90 EIQPEIKKLQQKYKDN-PQKQQEETMKLFQQHGVNPLAGCLPLLIQMPILIALYQAIMRN 148 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSP 509 +R F W++ L A D +Y I P+I +++ ++Q K MS Sbjct: 149 DAIREHTFL-WLQ-LGAKD-----------DYY--------ILPLIAAITTYLQQKTMSA 187 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++M+ + ++FV ++ SF + L +YW +SN+ +I Q Sbjct: 188 QMNQQMKSMLFIFPVLIFVMSM-SFASALPLYWIYSNLFTIAQ 229 >gi|294500761|ref|YP_003564461.1| membrane protein OxaA [Bacillus megaterium QM B1551] gi|295706106|ref|YP_003599181.1| membrane protein OxaA [Bacillus megaterium DSM 319] gi|294350698|gb|ADE71027.1| membrane protein OxaA [Bacillus megaterium QM B1551] gi|294803765|gb|ADF40831.1| membrane protein OxaA [Bacillus megaterium DSM 319] Length = 272 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 115/225 (51%), Gaps = 35/225 (15%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ M ++ G ++G++I++ TV ++L+ PL KQ ST M+ ++P++ Sbjct: 38 WDHYFVYPLSMALTKIAEWAGGSYGLSIIIATVIIRLVLLPLILKQQKSTMAMQALRPEM 97 Query: 397 DELREKF--KQSPPQVLQKAMIQ--LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 +++++K+ K+ P ++ LY+TH INP+ GC PI +Q+P+ A Y I+ + E Sbjct: 98 EKIQKKYAGKKDPETQQKQQKEMMQLYQTHKINPVGGCLPIFIQMPIIIAFYNAIARTHE 157 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---- 508 + F W+ L DP I P++ +++ F+Q+++S Sbjct: 158 IAQHSFL-WV-SLGKPDPYFIL-------------------PVVAAITTFLQIRVSMTDE 196 Query: 509 -PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 PP M++N MP+ + A S P+ L +YW N+ I Q Sbjct: 197 IQPPMK----MMMNIMPIFILVAGISLPSALALYWVIGNLFGIGQ 237 >gi|295111773|emb|CBL28523.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Synergistetes bacterium SGP1] Length = 259 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/245 (27%), Positives = 118/245 (48%), Gaps = 35/245 (14%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ Y + ++G+AI+L TV V++ PL +KQ VS M+ +QP+I L+ K+ Sbjct: 3 LLETLYGVTNSWGLAIILLTVIVRIAMHPLTQKQMVSMQRMQKLQPRIKVLQNKYGDD-K 61 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---------ISLEMRHAPFW 459 + L + M+ LYK I+P AGC P+L+Q+P+F +Y+V+ +++ + + Sbjct: 62 ETLNREMMALYKEEKISPAAGCLPLLIQLPIFILLYRVLYNNDFAGATFLTVHLDGSVLT 121 Query: 460 GWIKDLAAADPTNI-------------FTLFGILPFYLPGFMHVGIWPIIMSLSMFI--- 503 L D + F+ F LP F +VG+W M L + I Sbjct: 122 TMADALNLVDKAGVPIPRDQLGVVMVFFSSFTNLPLL---FSNVGMWLPNMILLILIAFL 178 Query: 504 ---QMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q +S A Q +++W MP++ F G+++YW S+++ +V Q +M+ Sbjct: 179 TWYQQHLS--SAGNPQMAMMSWFMPLLLTFICIGLQGGVLLYWGVSSLMGVVHQLRVMRK 236 Query: 560 HGAEI 564 E+ Sbjct: 237 TDEEM 241 >gi|304382921|ref|ZP_07365403.1| inner membrane protein OxaA [Prevotella marshii DSM 16973] gi|304335946|gb|EFM02194.1| inner membrane protein OxaA [Prevotella marshii DSM 16973] Length = 631 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 98/391 (25%), Positives = 191/391 (48%), Gaps = 52/391 (13%) Query: 192 DQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251 D+ R RG ++ +T T+ + +G L S E+K +E E+ W Sbjct: 208 DKARQQERGFTFENR--YSTLTYHLTKGGTDYLNATS--EKKDEPVE--------ETIDW 255 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYL-SDGHARYQAKFSANEITILPGKSITTTNFLFA 310 + ++++++V I + + +S + + + Y ++A T T T F F Sbjct: 256 IAFKNQFFSAVMIAKNDFAPNSLMTSIPQEKGSGYLKDYAAKAKTFFDPTGKTPTEFEFY 315 Query: 311 -GAKEFPTIHHYE------KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG----- 358 G +F + E KDL + R L+ GW P+F +++ ++ L Sbjct: 316 FGPNDFRLLQSIEQQSKFGKDLELQR---LVYLGW------PLFRIINRWFTLYVFDGLT 366 Query: 359 ----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL-QK 413 N GI ++L T+ +KL+ FPL KK Y+S+A M+ ++PK+DE +++ + Q+ Q+ Sbjct: 367 AMNINMGIVLILITLLLKLITFPLVKKSYMSSAKMRVLKPKLDEATKQYDKPEDQMQKQQ 426 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP--- 470 AM+ +Y + ++PL+GC P+L+Q+P++ A++ + ++++R F WI+DL+ DP Sbjct: 427 AMMTMYSKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGESFL-WIQDLSTYDPIWE 485 Query: 471 --TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWMPVV 526 +++ + L F + IM++ + +M A++ + M ++ MPV+ Sbjct: 486 WHDSLWLIGDHLSLTCILFCVANVLYSIMTMRQ-QRDQMVGQQAEQMKVMQYMMYVMPVM 544 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 F F + + +GL Y+ +S+ A IM Sbjct: 545 FFFMFNDYSSGLNFYY----FVSLFFSAAIM 571 >gi|15616626|ref|NP_244932.1| OxaA-like protein precursor [Bacillus halodurans C-125] gi|38503226|sp|Q9RCA5|OXAA1_BACHD RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|5672644|dbj|BAA82682.1| 62%-identity [Bacillus halodurans] gi|10176689|dbj|BAB07783.1| stage III sporulation protein J [Bacillus halodurans C-125] Length = 257 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/220 (33%), Positives = 114/220 (51%), Gaps = 28/220 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ LM YF N G+FG+AI++ T+ ++LL PL KQ ST M+ +QP++ Sbjct: 36 WDSYFVYPLSWLMIYFANAFNGSFGLAIIVVTLLIRLLILPLMIKQLKSTRAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 LREK+ Q Q LQ+ + L++ H +NPLAGC+P+L+Q+P+ A Y I + E+ Sbjct: 96 QALREKYSAKDQRTQQKLQQETMALFQKHGVNPLAGCFPVLIQMPILLAFYHAIMRTREI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 F ++ L DP + PII ++ F+Q KM + Sbjct: 156 GDEHFLWFV--LNQPDPI--------------------LLPIIAGITTFLQQKMMMVTDN 193 Query: 514 KGQAMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++L MPV + VFA+ P+ L +YW N+ I+Q Sbjct: 194 PQMKVLLYVMPVMILVFAM-FLPSSLALYWVIGNLFMILQ 232 >gi|319651097|ref|ZP_08005231.1| OxaA-like protein [Bacillus sp. 2_A_57_CT2] gi|317397267|gb|EFV77971.1| OxaA-like protein [Bacillus sp. 2_A_57_CT2] Length = 250 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 30/204 (14%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---QSPPQVLQKA 414 G++G++I++ T+ ++L+ PL KQ S+ M+ IQP++ +LREK+ Q Q LQ+ Sbjct: 46 GSYGLSIIIVTIIIRLVILPLMIKQTRSSKAMQAIQPEMQKLREKYSSKDQKTQQKLQQE 105 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 + L++ H +NPLAGC+P+++Q+P+ Y I+ + E+ + F W DL + DP Sbjct: 106 TMALFQKHGVNPLAGCFPLVIQMPILIGFYHAITRTREIANHNFL-WF-DLGSPDP---- 159 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK-GQ-----AMILNWMPVVFV 528 + + P+I ++ FIQ KM + GQ M+L MP++ V Sbjct: 160 ---------------IYLLPLIAGVTTFIQQKMMMAGTQQTGQMAAQMKMMLYLMPIMIV 204 Query: 529 FALSSFPAGLIIYWSWSNVISIVQ 552 +FPA L +YW N+ IVQ Sbjct: 205 IFAINFPAALSLYWVVGNIFMIVQ 228 >gi|299117626|emb|CBN75468.1| Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus siliculosus] Length = 449 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 26/228 (11%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +GI+I+ T+FVK + FPL +Q ST M+ + PK+ EL+ ++ +P + +A+ QLY Sbjct: 136 YGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNP-EAANQAVQQLY 194 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAPFWGWIKDLAA----ADPTNIF 474 +T N+NPLAGC P L QIP+F ++Y+ +++++ E + + WI L + PT + Sbjct: 195 QTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMM 254 Query: 475 TLFGILPFYLP--------GFMHVGIWPIIMSLSMFIQMKMSPP------PADKGQAM-- 518 + P +M + PII+ ++ I ++ P P D+ QA Sbjct: 255 SWIKDWSDGAPKLGWHDTIAYMTI---PIILVITQSISTRIMQPAKDPSQPVDESQAASQ 311 Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 I+ ++P++ + S P+ L +YW +N IS I E G Sbjct: 312 NIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIADETG 359 >gi|229917458|ref|YP_002886104.1| 60 kDa inner membrane insertion protein [Exiguobacterium sp. AT1b] gi|229468887|gb|ACQ70659.1| 60 kDa inner membrane insertion protein [Exiguobacterium sp. AT1b] Length = 286 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 77/228 (33%), Positives = 116/228 (50%), Gaps = 29/228 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W + P+ L+ LVG +GI+I++ T+ V+LL PL KQ S M+ +QP Sbjct: 42 WAKYFVWPLAWLLKEVAYLVGGPWQYGISIIIATIIVRLLILPLMIKQTKSMGAMQVLQP 101 Query: 395 KIDELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++ +LREK+ Q + LQ+ M++LY+ + INPLAGC PIL+Q+P+ FA Y I + Sbjct: 102 EMLKLREKYSSKDQETQRKLQEEMMKLYQEYQINPLAGCLPILIQMPILFAFYDAIRRTP 161 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+ A F W DL A DPT + PI+ ++ F Q K+S Sbjct: 162 EIFEANFL-WF-DLGAPDPTFVL-------------------PILAAILTFAQQKISMAG 200 Query: 512 ADKGQ--AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ M+L PV+ + PA L +YW +ISI+ IM Sbjct: 201 QEQNPQLKMMLYIFPVMIFVMSINLPAALSLYWVVGYIISIIVTMAIM 248 >gi|256851671|ref|ZP_05557059.1| stage III sporulation protein J [Lactobacillus jensenii 27-2-CHN] gi|260661612|ref|ZP_05862524.1| stage III sporulation protein J [Lactobacillus jensenii 115-3-CHN] gi|297205280|ref|ZP_06922676.1| stage III sporulation protein J [Lactobacillus jensenii JV-V16] gi|256615629|gb|EEU20818.1| stage III sporulation protein J [Lactobacillus jensenii 27-2-CHN] gi|260547669|gb|EEX23647.1| stage III sporulation protein J [Lactobacillus jensenii 115-3-CHN] gi|297149858|gb|EFH30155.1| stage III sporulation protein J [Lactobacillus jensenii JV-V16] Length = 290 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 22/207 (10%) Query: 355 NLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQV 410 +L+G N+G I++ T+ V+LL FPL ST + +QP+ID+LR K+ Q+ Sbjct: 66 DLLGKNYGWTIIVFTILVRLLLFPLNAISIKSTTKQQQLQPEIDKLRAKYPGNDAESRQL 125 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 L +LYK INP GC+P+LLQ+P FA+Y+ I + +++ F W+ +L+ ADP Sbjct: 126 LNAETQKLYKEAGINPYLGCFPMLLQLPFMFALYQAIYSTKQLQDGTFL-WM-NLSKADP 183 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVF 529 + ++P F +S ++ +P + + + W+ P++ Sbjct: 184 ------YYVMPILAAVFTF---------MSSYVAQMSAPESSSQSMTKAMMWITPLIVAV 228 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 SFP + +YW S++ S+VQ ++ Sbjct: 229 PAISFPTAITLYWVVSSIFSVVQTFIL 255 >gi|313891402|ref|ZP_07825018.1| putative stage III sporulation protein J [Dialister microaerophilus UPII 345-E] gi|313120177|gb|EFR43353.1| putative stage III sporulation protein J [Dialister microaerophilus UPII 345-E] Length = 266 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 35/241 (14%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN-----FGIAIMLTTVFVKLLFFPL 378 D IP L+ ++A+ M + + Y + + +GIAI+ TV +K++ PL Sbjct: 3 DFQIPVLSTLVG-----YLAEIMRFCLQFCYGITQDLGYPSYGIAIIALTVIIKVILLPL 57 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQI 437 A KQ S M+ +QP++ +++K+K ++ Q IQ LY ++PL+GC P+L+Q+ Sbjct: 58 AIKQIKSMKGMQEVQPQLAAIQKKYKND--KMRQSQEIQRLYAEKGVSPLSGCLPLLIQM 115 Query: 438 PVFFAI-YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 P AI Y + + HA F W++ LA DPT + P+I Sbjct: 116 PFLIAIFYALQGFPYDPNHASFL-WLESLAVPDPTYVL-------------------PVI 155 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAV 555 ++S +I K + GQ ++ + + + +S FP+GL+IYW SN+ +QQ + Sbjct: 156 SAVSTWIISKQTSGANVAGQQKMMMMVMPLMIGYISVKFPSGLVIYWIVSNLFQGIQQTI 215 Query: 556 I 556 + Sbjct: 216 M 216 >gi|282934245|ref|ZP_06339522.1| stage III sporulation protein J [Lactobacillus jensenii 208-1] gi|281301719|gb|EFA93986.1| stage III sporulation protein J [Lactobacillus jensenii 208-1] Length = 285 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 22/207 (10%) Query: 355 NLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQV 410 +L+G N+G I++ T+ V+LL FPL ST + +QP+ID+LR K+ Q+ Sbjct: 61 DLLGKNYGWTIIVFTILVRLLLFPLNAISIKSTTKQQQLQPEIDKLRAKYPGNDAESRQL 120 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 L +LYK INP GC+P+LLQ+P FA+Y+ I + +++ F W+ +L+ ADP Sbjct: 121 LNAETQKLYKEAGINPYLGCFPMLLQLPFMFALYQAIYSTKQLQDGTFL-WM-NLSKADP 178 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVF 529 + ++P F +S ++ +P + + + W+ P++ Sbjct: 179 ------YYVMPILAAVFTF---------MSSYVAQMSAPESSSQSMTKAMMWITPLIVAV 223 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 SFP + +YW S++ S+VQ ++ Sbjct: 224 PAISFPTAITLYWVVSSIFSVVQTFIL 250 >gi|323452174|gb|EGB08049.1| hypothetical protein AURANDRAFT_11603 [Aureococcus anophagefferens] Length = 219 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 113/214 (52%), Gaps = 23/214 (10%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +VG++G+AI+L T+ +K + FPL +Q ST M+ +QP I ++ K+ P Q + Sbjct: 1 GVVGSYGVAIVLFTLLLKAVTFPLNYQQIESTTKMQALQPAIKRIQAKYAADPQQ-MNIM 59 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAPFWGWIKDLAAA--DPT 471 M +LY+ + +NPLAGC P L+QIP+F A+Y+ ++S++ E + WI +L Sbjct: 60 MAELYQENELNPLAGCLPALVQIPIFIALYRSLLSLAKEDLLEESFLWIPNLEGPVYGAQ 119 Query: 472 NIFTLF------GILPFYLPGFMHVGI----WPIIMSLSMFIQMKMSPPPAD------KG 515 N LF G +P P H + P ++ ++ + PPAD + Sbjct: 120 NADWLFKFDQWNGAIP---PLGWHDTVAYLALPCLLVVAQSASTTLLQPPADPNNEAAQT 176 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 +L ++P++ F + PAGL IYW +N+I+ Sbjct: 177 SNQVLKYLPLMVGFFSLNVPAGLTIYWFCNNIIT 210 >gi|238855503|ref|ZP_04645808.1| membrane protein OxaA 1 [Lactobacillus jensenii 269-3] gi|260665207|ref|ZP_05866056.1| stage III sporulation protein J [Lactobacillus jensenii SJ-7A-US] gi|282931529|ref|ZP_06337028.1| stage III sporulation protein J [Lactobacillus jensenii 208-1] gi|313472762|ref|ZP_07813250.1| stage III sporulation protein J [Lactobacillus jensenii 1153] gi|238831869|gb|EEQ24201.1| membrane protein OxaA 1 [Lactobacillus jensenii 269-3] gi|260560944|gb|EEX26919.1| stage III sporulation protein J [Lactobacillus jensenii SJ-7A-US] gi|281304336|gb|EFA96439.1| stage III sporulation protein J [Lactobacillus jensenii 208-1] gi|313448863|gb|EEQ68258.2| stage III sporulation protein J [Lactobacillus jensenii 1153] Length = 285 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 114/223 (51%), Gaps = 27/223 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 FYF F+L + +L+G N+G I++ T+ V+LL FPL ST + +QP+ID Sbjct: 50 FYF---SQFLL--WLADLLGKNYGWTIIVFTILVRLLLFPLNAISIKSTTKQQQLQPEID 104 Query: 398 ELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +LR K+ Q+L +LYK INP GC+P+LLQ+P FA+Y+ I + +++ Sbjct: 105 KLRAKYPGNDAESRQLLNAETQKLYKEAGINPYLGCFPMLLQLPFMFALYQAIYSTKQLQ 164 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F W+ +L+ ADP + ++P F +S ++ +P + + Sbjct: 165 DGTFL-WM-NLSKADP------YYVMPILAAVFTF---------MSSYVAQMSAPESSSQ 207 Query: 515 GQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + W+ P++ SFP + +YW S++ S++Q ++ Sbjct: 208 SMTKAMMWITPLIVAVPAISFPTAITLYWVVSSIFSVIQTFIL 250 >gi|226355228|ref|YP_002784968.1| 60 kDa inner membrane insertion protein [Deinococcus deserti VCD115] gi|226317218|gb|ACO45214.1| putative 60 kDa inner membrane insertion protein, Membrane protein OxaA [Deinococcus deserti VCD115] Length = 542 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 76/255 (29%), Positives = 127/255 (49%), Gaps = 32/255 (12%) Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 ++ G E IH Y+ L + +F I+ + LM Y +GN+G+ ++ Sbjct: 270 VYGGRNEL--IHLYQSGYT--ELPGLFEPNFFGKISLMIVKLMESLYKFIGNWGLVLVAL 325 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHN 423 T+ ++L+ +PL + Q +TA M+ +QPKI E++EK+K + +Q M QLY+ +N Sbjct: 326 TLLLRLIMWPLMQAQGRTTARMQIMQPKIKEIQEKYKDKRDMESQRAMQSEMQQLYRDYN 385 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 NP AGC+ LL PV A++ I + E + W+ DLA D PFY Sbjct: 386 FNP-AGCFSTLLPFPVLIALWSTIR-NFEFDSG--FLWLPDLAIPD-----------PFY 430 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 + ++ +++++ M P K QA I ++F++ +FPAG+ IY Sbjct: 431 ILALIY-----LVVNIGQLYVMTRKTPDMFKQQAFIY----LIFLYFALTFPAGVTIYII 481 Query: 544 WSNVISIVQQAVIMK 558 S +I I+QQ +I K Sbjct: 482 LSTLIGIIQQVIINK 496 >gi|327334553|gb|EGE76264.1| membrane protein OxaA [Propionibacterium acnes HL097PA1] Length = 359 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 118/231 (51%), Gaps = 51/231 (22%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ T+F++LL PL KQ S +M+ IQPK+ ++EK+ + Q+ M+ LY+ Sbjct: 54 LAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQE-MMNLYRE 112 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI-----------------SISLEMRHAPFWGWIKD 464 +NP A C P+LLQ+P+F A+++V+ + ++HA F+G + Sbjct: 113 EGVNPAASCLPVLLQMPIFLALFRVLDGASRGIPRGHFFAKNPGLMESLQHAKFFG--AE 170 Query: 465 LAAADPTNIFTLFGILPFYLP---GFMHVGIWP----IIMSLSMF-----IQMKMSPP-- 510 LA +LP GF + IIM ++F + K PP Sbjct: 171 LAGR--------------FLPMNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPES 216 Query: 511 ---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P + Q M++ P++++F+ SFP G+++YWS SN+ ++ QQ ++++ Sbjct: 217 LTGPMAQQQKMMIYLFPLMYLFSGVSFPIGVMLYWSTSNLWTLGQQEILIR 267 >gi|23100949|ref|NP_694416.1| stage III sporulation protein J [Oceanobacillus iheyensis HTE831] gi|38503017|sp|Q8EKU1|OXAA_OCEIH RecName: Full=Membrane protein oxaA; Flags: Precursor gi|22779184|dbj|BAC15450.1| stage III sporulation protein J [Oceanobacillus iheyensis HTE831] Length = 252 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 108/213 (50%), Gaps = 37/213 (17%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ---SPPQVLQKAM 415 +G+AI++ T+FV+LL PL KQ S+ M+ IQPK+ E+++K+ + Q LQ+ Sbjct: 58 GYGLAIIIVTLFVRLLLMPLNVKQIKSSKAMQEIQPKLQEIQKKYTSKDANTQQKLQQET 117 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR-HAPFWGWIKDLAAADPTNIF 474 ++L++ + +NPLAGC PIL+Q+P+F A+Y I + E+ H+ W L + D Sbjct: 118 MELFQKNGVNPLAGCLPILVQMPIFVAMYHAIMRTPEISTHSFLWF---QLGSPD----- 169 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--------MSPPPADKGQAMILNW-MPV 525 I PI+ L F+Q K M+ P K Q I+ + MP+ Sbjct: 170 ----------------YILPILTGLFTFLQQKLMMSTNTSMNSNPQMKLQMQIMLYVMPI 213 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FPA L +YW N+ + Q +I K Sbjct: 214 MIGVMAFFFPAALALYWVTGNIFMVFQTLLINK 246 >gi|51894472|ref|YP_077163.1| SpoIIIJ [Symbiobacterium thermophilum IAM 14863] gi|51858161|dbj|BAD42319.1| SpoIIIJ [Symbiobacterium thermophilum IAM 14863] Length = 249 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 33/222 (14%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 ++ +PM L+ F GN+G+AI+L TV V+++ PL Q S M+ +QP + EL+ Sbjct: 37 WLVQPMTKLLEVFLKWTGNYGLAIILLTVVVRIVILPLTVYQMRSMKRMQEVQPLMKELQ 96 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMRHA 456 +K+K + P+ L + ++ LY+ +NP +GC P+L+Q+P+ +A++ V + + Sbjct: 97 DKYKDN-PEKLNQELMALYQREKVNPFSGCLPLLVQLPILYALFAVFNAFDPTKFNYTYQ 155 Query: 457 PFWGWIKDLAAAD-PTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 W DL+ D P I T+ IL YL G P D Sbjct: 156 FLWA---DLSQRDIPLAILTVVSMILQQYLTGM----------------------PTTDP 190 Query: 515 GQAMILNWMPVVFVFALSSFP-AGLIIYWSWSNVISIVQQAV 555 Q +++ MP++F + + P + +++YW S ++QQA+ Sbjct: 191 NQRVMMWIMPIMFGWIAFTMPTSSIVLYWVVSTFFGLIQQAI 232 >gi|238926593|ref|ZP_04658353.1| sporulation associated-membrane protein [Selenomonas flueggei ATCC 43531] gi|238885539|gb|EEQ49177.1| sporulation associated-membrane protein [Selenomonas flueggei ATCC 43531] Length = 224 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 95/179 (53%), Gaps = 21/179 (11%) Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 +PL KQ S M+ IQPK+ +++EK+K S PQ+LQ+ +L++ +NPLAGC P+L+ Sbjct: 51 YPLTVKQVKSMKAMQEIQPKMKKIQEKYK-SDPQMLQQKTGELFREAGVNPLAGCLPLLV 109 Query: 436 QIPVFFAI-YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 Q+P+ + Y + + + A + W+ ++ DP I P Sbjct: 110 QMPILMGMYYALFNFTFPSAEAAAFFWLPSMSEPDPYYIL-------------------P 150 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++ + + F+Q KM+ +++ MP+ + +FP+GL++YW NV+ I+QQ Sbjct: 151 VLSAATTFLQQKMTSSEMTGQMKIMMTVMPLFIGWISLTFPSGLVLYWVTMNVVQIIQQ 209 >gi|289427470|ref|ZP_06429183.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes J165] gi|289159400|gb|EFD07591.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes J165] gi|313806852|gb|EFS45350.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL087PA2] gi|313817639|gb|EFS55353.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL046PA2] gi|313821536|gb|EFS59250.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL036PA1] gi|313824520|gb|EFS62234.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL036PA2] gi|313826189|gb|EFS63903.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL063PA1] gi|314926337|gb|EFS90168.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL036PA3] gi|314961659|gb|EFT05760.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL002PA2] gi|314980261|gb|EFT24355.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL072PA2] gi|314987116|gb|EFT31208.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL005PA2] gi|314990682|gb|EFT34773.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL005PA3] gi|315083075|gb|EFT55051.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL027PA2] gi|315086609|gb|EFT58585.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL002PA3] gi|315088011|gb|EFT59987.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL072PA1] gi|327333669|gb|EGE75386.1| membrane protein OxaA [Propionibacterium acnes HL096PA3] gi|327444473|gb|EGE91127.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL013PA2] gi|328757980|gb|EGF71596.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL020PA1] gi|332676743|gb|AEE73559.1| membrane protein OxaA [Propionibacterium acnes 266] Length = 359 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 117/217 (53%), Gaps = 23/217 (10%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ T+F++LL PL KQ S +M+ IQPK+ ++EK+ + Q+ M+ LY+ Sbjct: 54 LAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQE-MMNLYRE 112 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPFWGWIKDLAAADPTNIFTLFG-- 478 +NP A C P+LLQ+P+F A+++V+ +S + F+ K+ + FG Sbjct: 113 EGVNPAASCLPVLLQMPIFLALFRVLDGVSRGIPRGHFFA--KNPGLMESLQHAKFFGAE 170 Query: 479 ILPFYLP---GFMHVGIWP----IIMSLSMF-----IQMKMSPP-----PADKGQAMILN 521 + +LP GF + IIM ++F + K PP P + Q M++ Sbjct: 171 LAGRFLPMNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIY 230 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P++++F+ SFP G+++YW SN+ ++ QQ ++++ Sbjct: 231 LFPLMYLFSGVSFPIGVMLYWCTSNLWTLGQQEILIR 267 >gi|297585590|ref|YP_003701370.1| YidC/Oxa1 family membrane protein insertase [Bacillus selenitireducens MLS10] gi|297144047|gb|ADI00805.1| membrane protein insertase, YidC/Oxa1 family [Bacillus selenitireducens MLS10] Length = 296 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 35/234 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W F P+ LM+ + N +G+AI++ T+ +++L PL KQ ST M+ IQP++ Sbjct: 46 WDPFFVYPLSWLMTTIAEFLNNSYGLAIIIVTIMLRILILPLMIKQTKSTKAMQAIQPQM 105 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV------I 447 EL++K+ + + LQ+ + L++ + +NPLAGC PI +Q+P+ A Y I Sbjct: 106 KELQQKYSAKDKKTQEKLQQETMALFQENKVNPLAGCLPIFIQMPILIAFYHAIIRTPQI 165 Query: 448 SISLEMRHAPFWG-----WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 + +++ R+ + W +L +ADP I P++ + F Sbjct: 166 NPNIDERYVGMYEPQQFLWF-ELGSADPYFIL-------------------PLVAGATTF 205 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 IQ +M + ++L MP++ + + FP+ L +YW N+ IVQ I Sbjct: 206 IQQRMMMVQDNPQMKVLLYVMPIMIMAFAAFFPSALALYWVIGNIFMIVQTQFI 259 >gi|303228587|ref|ZP_07315414.1| putative OxaA-like protein [Veillonella atypica ACS-134-V-Col7a] gi|303230686|ref|ZP_07317436.1| putative OxaA-like protein [Veillonella atypica ACS-049-V-Sch6] gi|302514741|gb|EFL56733.1| putative OxaA-like protein [Veillonella atypica ACS-049-V-Sch6] gi|302516766|gb|EFL58681.1| putative OxaA-like protein [Veillonella atypica ACS-134-V-Col7a] Length = 218 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 78/232 (33%), Positives = 121/232 (52%), Gaps = 35/232 (15%) Query: 339 FYFIAKPMFMLMSYFYN---LVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F ++ + M L++Y +N +VG ++G+AI++ TV +K + PL KQ S M+ +Q Sbjct: 4 FNYLVEFMRTLVTYAFNFTDMVGFPSYGVAIIIITVIIKAILAPLTVKQIKSMKAMQELQ 63 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---IS 450 P++ EL+EK+K PQ LQ M +YK +NPLAGC P+L+Q+P AI+ + + Sbjct: 64 PRMKELQEKYKND-PQRLQAEMGAMYKEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYN 122 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI---QMKM 507 E H + W+ L ADP I P++ +LS ++ Q M Sbjct: 123 PEFEH---FLWLPSLGEADPYYIL-------------------PVLSALSTWLMSRQTGM 160 Query: 508 SPPPADKGQAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 A Q I+ +MP+ + +FP+GL+IYW SNV +VQQ I K Sbjct: 161 GASGAAAQQQKIMQIFMPLFIGYISLNFPSGLVIYWIVSNVFQLVQQHFIYK 212 >gi|328883706|emb|CCA56945.1| Inner membrane protein translocase component YidC, long form [Streptomyces venezuelae ATCC 10712] Length = 441 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 76/248 (30%), Positives = 117/248 (47%), Gaps = 37/248 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G G++I+ V +++ PL KQ ST NM Sbjct: 8 FSFITTPVSWVIVQFHKVYGAIFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K S Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QALQPKMKAIQERYK-SDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLS- 125 Query: 450 SLEMRHAPFWGWIKD--LAAADPTNIFTL------------FGILPFYLPGFMHV-GIWP 494 + G I D LA+A +IF L L V I Sbjct: 126 --SIASGKTIGVIDDSLLASARQAHIFGAPLASKFTDSAAEVAALDASLTSVRIVTAIMI 183 Query: 495 IIMSLSMFI---QMKMS------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MS S F Q+ M P + Q M++ PV+F +FP G+++YW + Sbjct: 184 VLMSASQFFTQRQLMMKNVDLSVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTT 243 Query: 546 NVISIVQQ 553 NV ++ QQ Sbjct: 244 NVWTMGQQ 251 >gi|147772782|emb|CAN71675.1| hypothetical protein VITISV_036218 [Vitis vinifera] Length = 623 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 46/248 (18%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L TV VK FPL KKQ S M+++QP+I +++++ ++ Q +LY Sbjct: 179 YGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQRYAGDQERI-QLETARLY 237 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAAADPTNIFT--- 475 K INPLAGC P L IPV+ +Y+ +S ++ E + WI L+ PT I Sbjct: 238 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLSG--PTTIAARQN 295 Query: 476 -----------------------LFGILPFYLPGFMHVGI--------WPII-------- 496 + +LP L ++ + W ++ Sbjct: 296 GSGISWLFPFVDGHPPLGWSDTLAYLVLPMLLIVSQYISVQIMQSSQQWELLGHLKGVPK 355 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + L I + S P+ K + ++P++ + S P+GL +YW +N++S QQ + Sbjct: 356 LELETMIGLSQSNDPSLKTSQALTKFLPLMIGYFALSVPSGLSLYWFTNNILSTAQQVWL 415 Query: 557 MKMHGAEI 564 K+ GA+I Sbjct: 416 QKLGGAQI 423 >gi|313902790|ref|ZP_07836187.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter subterraneus DSM 13965] gi|313466910|gb|EFR62427.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter subterraneus DSM 13965] Length = 219 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 27/221 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W WF + + L + G+ G++I+L TV V+L+ PL Q S M+ +QP+ Sbjct: 5 WQWFVDLIEAGLELSR---SATGSAGLSIILFTVLVRLVLLPLTFSQTRSMQRMQALQPE 61 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 ++ +++K+K +P Q +A++QL++ +N+NP AGC P+L+Q P+ +A++ I+ Sbjct: 62 VERIQKKYKNNP-QKANEAIMQLWRENNVNPAAGCLPLLIQFPILYALF----IAFRDFS 116 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + WI DL DP + P++ ++ + QMK S Sbjct: 117 IGSFLWIPDLGKPDPWFVL-------------------PVLAGVTTYFQMKTSMTTVQPQ 157 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q +L MP + F SFPAGL +YW SN+ SIVQQ ++ Sbjct: 158 QRTMLVLMPAMLTFFAWSFPAGLALYWVTSNIFSIVQQVLM 198 >gi|292669288|ref|ZP_06602714.1| stage III sporulation protein J [Selenomonas noxia ATCC 43541] gi|292649129|gb|EFF67101.1| stage III sporulation protein J [Selenomonas noxia ATCC 43541] Length = 224 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 97/179 (54%), Gaps = 21/179 (11%) Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 +PL KQ S M+ IQPK+ +++EK+K + PQ+LQ+ +L++ +NPLAGC P+L+ Sbjct: 51 YPLTVKQVKSMKAMQEIQPKMKKIQEKYKNN-PQMLQQKTGELFRNAGVNPLAGCLPLLV 109 Query: 436 QIPVFFAI-YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 Q+P+ + Y + + + A + W+ +++ DP I P Sbjct: 110 QMPILMGMYYALFNFTFPSAAAAAFFWLPNMSEPDPLYIL-------------------P 150 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++ +L+ F+Q KM+ + +++ MP+ + FP+GL++YW NV+ I+QQ Sbjct: 151 VLSALTTFLQQKMTSTEMNAQMKIMMTVMPLFIGWISLKFPSGLVLYWVTMNVVQIIQQ 209 >gi|304437936|ref|ZP_07397882.1| stage III sporulation protein J [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369076|gb|EFM22755.1| stage III sporulation protein J [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 224 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 94/179 (52%), Gaps = 21/179 (11%) Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 +PL KQ S M++IQPK+ +++EK+K PQ+LQ+ +L++ +NPLAGC P+L+ Sbjct: 51 YPLTVKQVKSMKAMQDIQPKMKKIQEKYKHD-PQMLQQKTGELFREAGVNPLAGCLPLLV 109 Query: 436 QIPVFFAI-YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 Q+P+ + Y + + + A + W+ ++ DP I P Sbjct: 110 QMPILMGMYYALFNFTFPSAEAAAFFWLPSMSEPDPYYIL-------------------P 150 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++ + + F+Q KM+ +++ MP+ + +FP+GL++YW NV+ I QQ Sbjct: 151 VLSAATTFLQQKMTSSEMTGQMKIMMTVMPLFIGWISLTFPSGLVLYWVTMNVVQIAQQ 209 >gi|323446883|gb|EGB02892.1| hypothetical protein AURANDRAFT_16967 [Aureococcus anophagefferens] Length = 196 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 110/209 (52%), Gaps = 31/209 (14%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 ++ + +VG++G+AI+L T+ +K + FPL +Q ST M+ +QP I ++ K+ + PQ Sbjct: 1 ITLIHGVVGSYGVAIVLFTLLLKAVTFPLNYQQIESTTKMQALQPAIKRIQAKYA-ADPQ 59 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAPFWGWIKDLAAA 468 + M +LY+ + +NPLAGC P L+QIP+F A+Y+ ++S++ E + WI +L Sbjct: 60 QMNIMMAELYQENELNPLAGCLPALVQIPIFIALYRSLLSLAKEDLLEESFLWIPNLEGP 119 Query: 469 --DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD------KGQAMIL 520 N LF F H + +Q PPAD + +L Sbjct: 120 VYGAQNADWLF--------KFDHAS--------TTLLQ-----PPADPNNEAAQTSNQVL 158 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 ++P++ F + PAGL IYW +N+I+ Sbjct: 159 KYLPLMVGFFSLNVPAGLTIYWFCNNIIT 187 >gi|288554603|ref|YP_003426538.1| OxaA-like protein precursor [Bacillus pseudofirmus OF4] gi|288545763|gb|ADC49646.1| OxaA-like protein precursor SpoIIIJ [Bacillus pseudofirmus OF4] Length = 255 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 115/219 (52%), Gaps = 27/219 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W + P+ L+ YF + ++G++I++ T+ ++LL PL KQ S M+ IQP++ Sbjct: 36 WNSYFVYPLSWLIIYFGEALNSYGLSIIVVTILLRLLILPLMIKQTKSAKAMQAIQPEMQ 95 Query: 398 ELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +LREK+ Q Q LQ+ M+ +++ +NPLAGC P+ +Q+P+ A Y I + + Sbjct: 96 KLREKYSAKDQKTQQKLQQEMMAMFQERGVNPLAGCLPLFVQMPILLAFYHAIMRTDVIG 155 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + F W +L A DP F L PI+ ++ FIQ KM + Sbjct: 156 NYSFL-WF-ELGAPDP---FVL-----------------PIVAGITTFIQQKMMMVTDNP 193 Query: 515 GQAMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++L MPV +FVFA+ FPA L +YW N++ I Q Sbjct: 194 QMKILLYVMPVMIFVFAM-FFPAALTLYWVVGNLVMITQ 231 >gi|169825323|ref|YP_001692934.1| hypothetical protein FMG_1626 [Finegoldia magna ATCC 29328] gi|302380113|ref|ZP_07268586.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna ACS-171-V-Col3] gi|303234455|ref|ZP_07321093.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna BVS033A4] gi|167832128|dbj|BAG09044.1| putative membrane protein [Finegoldia magna ATCC 29328] gi|302312055|gb|EFK94063.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna ACS-171-V-Col3] gi|302494410|gb|EFL54178.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna BVS033A4] Length = 243 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 40/221 (18%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + F I+I+L T+ KL+ P+ + +QP++ E++ K+K P Q Q M Sbjct: 29 ISYFAISILLLTLIYKLITLPVTIHTQKTQEQNALMQPEMKEIQRKYKNDP-QTQQLKMQ 87 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVI---------SISLEMRHAPFWGWIKDLAA 467 +LYK +N NPL+GC PI+LQ+ + A+++V+ ++S A + WI DL Sbjct: 88 ELYKKYNFNPLSGCLPIILQMVLVLALFRVMREPGKYMFDNVSKINEIARNFFWIPDLTK 147 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK-------GQAMIL 520 DP LFG+ P+I + + F+ K+S P K Q ++ Sbjct: 148 PDP----VLFGL--------------PLINAFTQFLVAKISMPAKSKDKKSNEPDQMEMM 189 Query: 521 N-----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 N +MP+ F S + +GLI+YW +SNVI ++ + +I Sbjct: 190 NKSMIYFMPIFMFFISSKYASGLILYWGFSNVIEVLIRLII 230 >gi|224550131|gb|ACN54150.1| 60 kDa inner membrane protein [Wolbachia endosymbiont of Nasonia longicornis] gi|224550135|gb|ACN54152.1| 60 kDa inner membrane protein [Wolbachia endosymbiont of Nasonia giraulti] Length = 125 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 47/118 (39%), Positives = 70/118 (59%), Gaps = 1/118 (0%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFL 308 +W G +DKYW + IP K + K+ + + ++QA F ILPG S +T N+ Sbjct: 7 NWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNIDKFQADFVRPYTHILPGTSASTLNYF 66 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 FAGAK+ + Y+ L IP F+ +D+G YFI KP+F+L+ YF ++ NFG AI+L Sbjct: 67 FAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGKAILL 124 >gi|299820845|ref|ZP_07052734.1| stage III sporulation protein J [Listeria grayi DSM 20601] gi|299817866|gb|EFI85101.1| stage III sporulation protein J [Listeria grayi DSM 20601] Length = 282 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 114/227 (50%), Gaps = 30/227 (13%) Query: 338 WFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ L+ +F NL G++ I I++ T+ ++L+ PL KQ S M IQPK+ Sbjct: 37 WSHYIVFPLSWLIRWFSDNLGGSYAIGIIVVTIIIRLIIMPLMIKQIKSQKEMTKIQPKM 96 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ Q LQ+ ++LY+ HN+NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 97 KELQQKYASKDNETKQKLQQETMRLYQEHNVNPMMGCLPLLIQMPILIGFYQAISRTAEI 156 Query: 454 RHAPF-WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSP 509 + F W + P F L PI+ +++ F K M Sbjct: 157 KSDTFLW-----MTLGHPDQFFIL-----------------PILAAITTFFSSKIGMMGQ 194 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K AMI MPV+ + S P+ L +YW N+ + +Q +I Sbjct: 195 VQQNKSMAMITYIMPVMILVMGISLPSALALYWIIGNIFTFLQTLLI 241 >gi|168214845|ref|ZP_02640470.1| membrane protein OxaA [Clostridium perfringens CPE str. F4969] gi|169343448|ref|ZP_02864448.1| membrane protein OxaA [Clostridium perfringens C str. JGS1495] gi|169298400|gb|EDS80489.1| membrane protein OxaA [Clostridium perfringens C str. JGS1495] gi|170713745|gb|EDT25927.1| membrane protein OxaA [Clostridium perfringens CPE str. F4969] Length = 238 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 20/176 (11%) Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 KQ S M+ IQP+I +L++K+K +P + Q+ M++LYK +N+NP++GC P+L+Q+P+ Sbjct: 56 KQTRSQQKMQEIQPEIAKLQKKYKNNPEKA-QQEMMKLYKENNVNPMSGCLPLLIQMPIL 114 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 FA+Y V + E++ F W+ DL A D T I + YL + ++ Sbjct: 115 FALYYVFTGLAELKGVSFL-WLGDLWAPDRTFILPILSAATTYLSSLL----------MT 163 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALS----SFPAGLIIYWSWSNVISIVQ 552 F Q + P M +N M +V + FP+ L++YW N+I +VQ Sbjct: 164 KFTQSQAGGAPG----GMNMNTMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQ 215 >gi|297588064|ref|ZP_06946708.1| YidC/Oxa1 family membrane protein insertase [Finegoldia magna ATCC 53516] gi|297574753|gb|EFH93473.1| YidC/Oxa1 family membrane protein insertase [Finegoldia magna ATCC 53516] Length = 221 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 40/230 (17%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + F I+I+L T+ KL+ P+ + +QP+I E++ K+K P Q Q M Sbjct: 7 ISYFAISILLLTLIYKLITLPVTIHTQKTQEQNALMQPEIKEIQRKYKNDP-QTQQLKMQ 65 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVI---------SISLEMRHAPFWGWIKDLAA 467 +LYK +N NPL+GC PI+LQ+ + A+++V+ +++ A + WI DL Sbjct: 66 ELYKKYNFNPLSGCLPIILQMVLVLALFRVMREPGKYMFDNVAKINEIARNFFWIPDLTK 125 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK-------GQAMIL 520 DP LFG+ P+I + + F+ K+S P +K Q ++ Sbjct: 126 PDP----VLFGL--------------PLINAFTQFLVAKISMPTNNKDKKSNEPDQMEMM 167 Query: 521 N-----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 N +MP+ F S + +GLI+YW +SNV+ ++ + +I ++ Sbjct: 168 NKSMIYFMPIFMFFISSKYASGLILYWGFSNVLEVIIRLIIKNKDKKDVA 217 >gi|28493772|ref|NP_787933.1| inner membrane protein translocase component YidC [Tropheryma whipplei str. Twist] gi|28476814|gb|AAO44902.1| stage III sporulation protein J-like protein [Tropheryma whipplei str. Twist] Length = 333 Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 73/273 (26%), Positives = 131/273 (47%), Gaps = 48/273 (17%) Query: 329 RFEMLIDWGWFYFIAKPMF-------MLMSYFYNLVGNFG----------IAIMLTTVFV 371 R E + D G F F+ + ++ +F+ L+G G ++I+ + + Sbjct: 20 RLEKMFD-GLFDFLQNILLPIKWVIEQILVFFHTLLGFLGFGDKSGLSWALSIVGLVIVI 78 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPL 427 + P+ KQ + M I P++ ++EK+K Q + + M+++Y+ NPL Sbjct: 79 RATLIPVFLKQIRAQRKMLEIAPEVRRIQEKYKGKRDVLSRQSMNQEMMEIYRVRGANPL 138 Query: 428 AGCWPILLQIPVFFAIYKVIS---------------ISLEMRHAPFWGWIKDLAAADPTN 472 + C PI+LQ+PVFF +Y+VI + ++ R + +G + L + + Sbjct: 139 SSCLPIVLQMPVFFGLYQVIESAQNAGTGVGPLNGPLGMDFRDSRIFGVV-PLHDSFSHD 197 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIM-SLSMFIQMKMSPP--PAD-------KGQAMILNW 522 + L F L + G+ IM ++ +F Q+K+ P P + K Q ++L Sbjct: 198 FYALQAGQAFNLITMIVAGVLTAIMIAVQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYL 257 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 +P++F+ SFP G++IYW+ SNV S VQQAV Sbjct: 258 LPIMFLGMGFSFPVGILIYWTASNVWSAVQQAV 290 >gi|110801038|ref|YP_697348.1| putative inner membrane protein translocase component YidC [Clostridium perfringens ATCC 13124] gi|168211555|ref|ZP_02637180.1| membrane protein OxaA [Clostridium perfringens B str. ATCC 3626] gi|110675685|gb|ABG84672.1| membrane protein OxaA [Clostridium perfringens ATCC 13124] gi|170710464|gb|EDT22646.1| membrane protein OxaA [Clostridium perfringens B str. ATCC 3626] Length = 238 Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 20/176 (11%) Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 KQ S M+ IQP+I +L++K+K +P + Q+ M++LYK +N+NP++GC P+L+Q+P+ Sbjct: 56 KQTRSQQKMQEIQPEIAKLQKKYKNNPEKA-QQEMMKLYKENNVNPMSGCLPLLIQMPIL 114 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 FA+Y V + E++ F W+ DL A D T I + YL + ++ Sbjct: 115 FALYYVFTGLTELQGVSFL-WLGDLWAPDRTFILPILSAATTYLSSLL----------MT 163 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALS----SFPAGLIIYWSWSNVISIVQ 552 F Q + P M +N M +V + FP+ L++YW N+I +VQ Sbjct: 164 KFTQSQAGGAPG----GMNMNTMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQ 215 >gi|18311639|ref|NP_563573.1| putative inner membrane protein translocase component YidC [Clostridium perfringens str. 13] gi|168207740|ref|ZP_02633745.1| membrane protein OxaA [Clostridium perfringens E str. JGS1987] gi|168218053|ref|ZP_02643678.1| membrane protein OxaA [Clostridium perfringens NCTC 8239] gi|38503106|sp|Q8XH28|OXAA_CLOPE RecName: Full=Membrane protein oxaA gi|18146323|dbj|BAB82363.1| stage III sporulation protein J [Clostridium perfringens str. 13] gi|170660941|gb|EDT13624.1| membrane protein OxaA [Clostridium perfringens E str. JGS1987] gi|182379924|gb|EDT77403.1| membrane protein OxaA [Clostridium perfringens NCTC 8239] Length = 238 Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 20/176 (11%) Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 KQ S M+ IQP+I +L++K+K +P + Q+ M++LYK +N+NP++GC P+L+Q+P+ Sbjct: 56 KQTRSQQKMQEIQPEIAKLQKKYKNNPEKA-QQEMMKLYKENNVNPMSGCLPLLIQMPIL 114 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 FA+Y V + E++ F W+ DL A D T I + YL + ++ Sbjct: 115 FALYYVFTGLTELQGVSFL-WLGDLWAPDRTFILPILSAATTYLSSLL----------MT 163 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALS----SFPAGLIIYWSWSNVISIVQ 552 F Q + P M +N M +V + FP+ L++YW N+I +VQ Sbjct: 164 KFTQSQAGGAPG----GMNMNTMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQ 215 >gi|329121491|ref|ZP_08250115.1| ParB/SpoJ family partitioning protein [Dialister micraerophilus DSM 19965] gi|327469406|gb|EGF14876.1| ParB/SpoJ family partitioning protein [Dialister micraerophilus DSM 19965] Length = 266 Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 119/241 (49%), Gaps = 35/241 (14%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN-----FGIAIMLTTVFVKLLFFPL 378 D IP L+ ++A+ M + + Y + + +GIAI+ TV +K++ PL Sbjct: 3 DFQIPVLSTLVG-----YLAEIMRFCLQFCYGITQDLGYPSYGIAIIALTVIIKVILLPL 57 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQI 437 A KQ S M+ +QP++ +++K+K ++ Q IQ LY ++PL+GC P+L+Q+ Sbjct: 58 AIKQIKSMKGMQEVQPQLAAIQKKYKND--KMRQSQEIQRLYAEKGVSPLSGCLPLLIQM 115 Query: 438 PVFFAI-YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 P AI Y + + H F W++ LA DPT + P+I Sbjct: 116 PFLIAIFYALQGFPYDPNHVSFL-WLESLAVPDPTYVL-------------------PVI 155 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAV 555 ++S +I K + GQ ++ + + + +S FP+GL+IYW SN+ +QQ + Sbjct: 156 SAVSTWIISKQTSGANVAGQQKMMMMVMPLMIGYISVKFPSGLVIYWIVSNLFQGIQQTI 215 Query: 556 I 556 + Sbjct: 216 M 216 >gi|297622618|ref|YP_003704052.1| membrane protein insertase, YidC/Oxa1 family [Truepera radiovictrix DSM 17093] gi|297163798|gb|ADI13509.1| membrane protein insertase, YidC/Oxa1 family [Truepera radiovictrix DSM 17093] Length = 562 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 30/216 (13%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + +++ Y +VG++G+AI+L T+ + L +PL Q S M+ IQPK+ EL++K+K Sbjct: 315 IIVVLEAIYGVVGSWGLAIILLTLLFRALVWPLISAQTKSMVGMQKIQPKMQELQKKYKN 374 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ Q+ M +LY+ +NP GC PIL+Q+P+F +++V I+ E + WI DL Sbjct: 375 DREKLTQETM-KLYQEAGVNPAGGCLPILVQMPIFIILWRVF-INFEFNEG--FLWIPDL 430 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 +D PFYL PI+ M Q + A KG +L + Sbjct: 431 GLSD-----------PFYL--------LPILYVAVMVGQSVV----ASKGNTQMLRQQLL 467 Query: 526 V---FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FVF + FPAG+ +Y S +I ++QQ +I + Sbjct: 468 ISGVFVFFIFGFPAGVTLYLITSMLIQVLQQWLIQR 503 >gi|307243391|ref|ZP_07525548.1| stage III sporulation protein J family protein [Peptostreptococcus stomatis DSM 17678] gi|306493201|gb|EFM65197.1| stage III sporulation protein J family protein [Peptostreptococcus stomatis DSM 17678] Length = 233 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 108/221 (48%), Gaps = 42/221 (19%) Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y ++GN+G++I++ T+ VK++ PL KQ ST M I PK+ E++ K+K P + + Sbjct: 16 YGVIGNYGLSIIVFTIIVKMILMPLTVKQTKSTFAMSEINPKVKEIQAKYKNKPEKQ-NE 74 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF------------WGW 461 + +LYK INPL+GC PIL+Q+P+ ++ V + H F + W Sbjct: 75 EISKLYKESGINPLSGCLPILIQMPILMGLFYVFKDPV--THGVFASKAAMAAANGNFLW 132 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 IK L + P I +F + YL +Q M+P +G +++ Sbjct: 133 IKAL--SKPDYILAVFSGVSAYL------------------MQKVMTPKDQIEGPMKMMS 172 Query: 522 W----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 W M + + F FPA L +YW SN+ S+ Q +I + Sbjct: 173 WLLAGMSLYWGFI---FPAALTLYWGVSNIFSVFQYYLITR 210 >gi|284047382|ref|YP_003397722.1| membrane protein insertase, YidC/Oxa1 family [Conexibacter woesei DSM 14684] gi|283951603|gb|ADB54347.1| membrane protein insertase, YidC/Oxa1 family [Conexibacter woesei DSM 14684] Length = 309 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 113/222 (50%), Gaps = 16/222 (7%) Query: 352 YFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 +F++ VG +G++I+L T+ V+++ PL KQ S ++ + P++ ++ K++ S Q Sbjct: 23 FFHDTVGTGWGLSIILLTITVRVILLPLTLKQVKSMQRLQLLAPELRRIQAKYR-SDKQR 81 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 Q+ M++ Y+ + +NPLA C+P+L Q+P F +Y ++ L G A Sbjct: 82 QQQEMMKFYQENRVNPLASCFPLLFQLPFFIGLYYMLRTDLRFD---ICGQTAKACADAT 138 Query: 471 TNIFTLFGILP-----FYLPGFMHVGIWPIIMSL------SMFIQMKMSPPPADKGQAMI 519 F G P ++P +++ L + +S D+ Q MI Sbjct: 139 AANFASVGAKPGSESFLFIPDLTGRATGAVLVVLIVLYVGTQIASGLLSTASMDRNQRMI 198 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + +P+VFV + +FPAGL++YW +N +IVQQ ++ K G Sbjct: 199 MLGLPIVFVAFIINFPAGLMLYWITTNCWTIVQQLIVRKTVG 240 >gi|326329125|ref|ZP_08195453.1| membrane protein OxaA [Nocardioidaceae bacterium Broad-1] gi|325953012|gb|EGD45024.1| membrane protein OxaA [Nocardioidaceae bacterium Broad-1] Length = 330 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 20/216 (9%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 + +AI+ TV ++ L PL KQ S+ NM+ +QPK+ EL++K+ ++ + M +L Sbjct: 40 QWALAIVGLTVTIRALLIPLFVKQINSSRNMQLLQPKVRELQKKYGHDREKLANETM-KL 98 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK NP A C P+LLQ+P+FF +++++ + + G++ D AA + L Sbjct: 99 YKDSGTNPFASCLPLLLQMPIFFVLFRMLEHASDGIGK---GFLSDEAAHEFATSTWLGS 155 Query: 479 ILP-----------FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----QAMILNW 522 +L ++L GF+ V + + K P A G Q ++L Sbjct: 156 LLSDQFTTADHTSTYFLTGFLVVAMIATTFLTQRQLMSKNMPADAMTGQYAQQQKLLLYV 215 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +PVVF +FP G I+YW+ SN+ ++ QQ +++ Sbjct: 216 LPVVFAVGGIAFPVGTILYWTSSNLWTMGQQFYVIR 251 >gi|299135904|ref|ZP_07029088.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX8] gi|298602028|gb|EFI58182.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX8] Length = 601 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 84/364 (23%), Positives = 170/364 (46%), Gaps = 72/364 (19%) Query: 231 EQKYSDIEKSSI-SNFHESNSWLGISDKYWASVFIPSKE-----TSFHSQFKYLSDGHAR 284 + ++ DI+ +S + + + G+SD+Y+A+VF+P + + H+Q Sbjct: 236 KDEHLDIKHTSGGATLKQPFDFAGVSDQYFAAVFMPDQPQDAMLVTLHNQI--------- 286 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI-PR-------------- 329 N+++ +PG S T G H + L + P+ Sbjct: 287 -----DVNKMSRMPGFSKGTAQVPVLGTAVGNVSGHNQTRLFVGPKSIKVLKSVRTANNN 341 Query: 330 -FEMLIDWGWFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLA 379 E L+D+G++ + K +F+ + ++ + + +G AI+ T+ + L+ PL Sbjct: 342 TLETLLDFGFWGPVGKVLFLGLQAVHSALPHALDAVHDYSWGWAIIFFTILINLILLPLR 401 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQ---SPPQV--LQKAMIQLYKTHNINPLAGCWPIL 434 + S M+ IQP+ID ++ K+K + P++ + +++ K + ++ GC P L Sbjct: 402 VQGMRSMLKMQRIQPQIDAIKAKYKNPKATDPKMAEMNAEIMKTQKDNGVSMFGGCVPSL 461 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA + +++ +E+R + W W+ DL+ ADP +I P Sbjct: 462 IQLPLLFAFFTMMTRVVELRQS-HWYWLHDLSLADPHHIL-------------------P 501 Query: 495 IIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 I+M ++ F+ +P P + Q M+ MP+ + + +GL +YW+ SN++ I+Q Sbjct: 502 ILMVITSFLAQYYTPSPGVDPQQQKMMAFMMPLFSGYMTWQYASGLALYWNISNIVMIIQ 561 Query: 553 QAVI 556 Q V+ Sbjct: 562 QQVM 565 >gi|34763009|ref|ZP_00143985.1| 60 kDa inner membrane protein YIDC [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237741004|ref|ZP_04571485.1| inner membrane protein YIDC [Fusobacterium sp. 4_1_13] gi|256846682|ref|ZP_05552138.1| inner membrane protein YIDC [Fusobacterium sp. 3_1_36A2] gi|294784389|ref|ZP_06749680.1| stage III sporulation protein J [Fusobacterium sp. 3_1_27] gi|27887310|gb|EAA24404.1| 60 kDa inner membrane protein YIDC [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229431048|gb|EEO41260.1| inner membrane protein YIDC [Fusobacterium sp. 4_1_13] gi|256717902|gb|EEU31459.1| inner membrane protein YIDC [Fusobacterium sp. 3_1_36A2] gi|294487961|gb|EFG35316.1| stage III sporulation protein J [Fusobacterium sp. 3_1_27] Length = 205 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 37/224 (16%) Query: 350 MSYFYNL---------------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 M Y YNL VGNFGI+I++ T+ +K+L PL KQ S MK +QP Sbjct: 1 MRYIYNLLQQFFAFLLNTTDKYVGNFGISIIVVTILIKILLLPLTLKQDKSMKEMKKLQP 60 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++++++K+ Q+L ++LY+ H +NPL GC PIL+Q+P+ FA++ V+ + + Sbjct: 61 ELEKIKQKYAND-KQMLNIKTMELYREHKVNPLGGCLPILIQLPILFALFGVLRNGIIPK 119 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + F W+K DP PFY I P++ F+Q K+ + Sbjct: 120 DSSFL-WMK---LVDPD---------PFY--------ILPVLNGAVSFLQQKLMGTSDNP 158 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ P++ + P+GL +YW S+++++VQQ IMK Sbjct: 159 QMKNMMFVFPILMIVISYRMPSGLQLYWLTSSILAVVQQYFIMK 202 >gi|239616662|ref|YP_002939984.1| 60 kDa inner membrane insertion protein [Kosmotoga olearia TBF 19.5.1] gi|239505493|gb|ACR78980.1| 60 kDa inner membrane insertion protein [Kosmotoga olearia TBF 19.5.1] Length = 445 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 81/254 (31%), Positives = 131/254 (51%), Gaps = 32/254 (12%) Query: 312 AKEFPTIHH-YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 ++ FP I+ +KDL E G+ +I + + + Y L +FG AI+L T+ Sbjct: 202 SEAFPEIYEEIKKDL-----EEFGAIGFTSYIFHGLVAFLYWLYKLTKSFGWAIILFTIV 256 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 V+L+ +PL Q S M+ +QP+I+++++K+K PQ Q+A+ +LY+ NINP GC Sbjct: 257 VRLVLYPLYHLQTKSMIQMRAVQPEIEKIKKKYKD--PQKQQQALTKLYREKNINPATGC 314 Query: 431 WPILLQIPVFFAIYKVISISLEM-RHAP-FWGWIKDLAAADPTNIFTLFGI-LPFYLPGF 487 +L+Q+PVFF +Y VI EM ++P F W DL+ F I LPF + Sbjct: 315 LTLLIQLPVFFVLYAVIRYFGEMFAYSPKFLIW-SDLSTGG-------FVINLPFII--- 363 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 I + ++ + S P Q MI N V+F F SFP+GL +Y++ + V Sbjct: 364 -------ITILAGFYMSLFTSQDPRAARQGMIFN---VMFPFLFYSFPSGLFLYYTTNTV 413 Query: 548 ISIVQQAVIMKMHG 561 I ++ + + G Sbjct: 414 IQMLITIYVYRKFG 427 >gi|282853036|ref|ZP_06262373.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes J139] gi|282582489|gb|EFB87869.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes J139] gi|314922673|gb|EFS86504.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL001PA1] gi|314965757|gb|EFT09856.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL082PA2] gi|314982899|gb|EFT26991.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL110PA3] gi|315091205|gb|EFT63181.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL110PA4] gi|315094439|gb|EFT66415.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL060PA1] gi|327328934|gb|EGE70694.1| membrane protein OxaA [Propionibacterium acnes HL103PA1] Length = 359 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 51/231 (22%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ T+F++LL PL KQ S +M+ IQPK+ ++EK+ + Q+ M+ LY+ Sbjct: 54 LAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQE-MMNLYRE 112 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI-----------------SISLEMRHAPFWGWIKD 464 +NP A C P+LLQ+P+F A+++V+ + ++HA F+G + Sbjct: 113 EGVNPAASCLPVLLQMPIFLALFRVLDGASRGIPRGHFFAKNPGLMESLQHAKFFG--AE 170 Query: 465 LAAADPTNIFTLFGILPFYLP---GFMHVGIWP----IIMSLSMF-----IQMKMSPP-- 510 LA +LP GF + IIM ++F + K PP Sbjct: 171 LAGR--------------FLPMNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPES 216 Query: 511 ---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P + Q M++ P++++F+ SFP G+++YW SN+ ++ QQ ++++ Sbjct: 217 LTGPMAQQQKMMIYLFPLMYLFSGVSFPIGVMLYWCTSNLWTLGQQEILIR 267 >gi|50843790|ref|YP_057017.1| putative inner membrane protein translocase component YidC [Propionibacterium acnes KPA171202] gi|289424430|ref|ZP_06426213.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes SK187] gi|295131878|ref|YP_003582541.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes SK137] gi|50841392|gb|AAT84059.1| conserved membrane protein [Propionibacterium acnes KPA171202] gi|289155127|gb|EFD03809.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes SK187] gi|291377350|gb|ADE01205.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes SK137] gi|313771070|gb|EFS37036.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL074PA1] gi|313792572|gb|EFS40658.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL110PA1] gi|313803573|gb|EFS44755.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL110PA2] gi|313811765|gb|EFS49479.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL083PA1] gi|313814225|gb|EFS51939.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL025PA1] gi|313815413|gb|EFS53127.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL059PA1] gi|313829185|gb|EFS66899.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL063PA2] gi|313832299|gb|EFS70013.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL007PA1] gi|313832759|gb|EFS70473.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL056PA1] gi|313839618|gb|EFS77332.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL086PA1] gi|314916209|gb|EFS80040.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL005PA4] gi|314917476|gb|EFS81307.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL050PA1] gi|314921812|gb|EFS85643.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL050PA3] gi|314930923|gb|EFS94754.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL067PA1] gi|314955281|gb|EFS99686.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL027PA1] gi|314959154|gb|EFT03256.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL002PA1] gi|314963877|gb|EFT07977.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL082PA1] gi|314969087|gb|EFT13185.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL037PA1] gi|314975194|gb|EFT19289.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL053PA1] gi|314977606|gb|EFT21701.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL045PA1] gi|314985207|gb|EFT29299.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL005PA1] gi|315078989|gb|EFT51001.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL053PA2] gi|315081501|gb|EFT53477.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL078PA1] gi|315097166|gb|EFT69142.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL038PA1] gi|315099346|gb|EFT71322.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL059PA2] gi|315102313|gb|EFT74289.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL046PA1] gi|315107502|gb|EFT79478.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL030PA1] gi|315109870|gb|EFT81846.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL030PA2] gi|327332496|gb|EGE74231.1| membrane protein OxaA [Propionibacterium acnes HL096PA2] gi|327446727|gb|EGE93381.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL043PA2] gi|327448831|gb|EGE95485.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL043PA1] gi|327454248|gb|EGF00903.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL087PA3] gi|327456308|gb|EGF02963.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL083PA2] gi|327457418|gb|EGF04073.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL092PA1] gi|328756006|gb|EGF69622.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL087PA1] gi|328758849|gb|EGF72465.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL025PA2] gi|328759807|gb|EGF73398.1| membrane protein OxaA [Propionibacterium acnes HL099PA1] Length = 359 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 51/231 (22%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ T+F++LL PL KQ S +M+ IQPK+ ++EK+ + Q+ M+ LY+ Sbjct: 54 LAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQE-MMNLYRE 112 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI-----------------SISLEMRHAPFWGWIKD 464 +NP A C P+LLQ+P+F A+++V+ + ++HA F+G + Sbjct: 113 EGVNPAASCLPVLLQMPIFLALFRVLDGASRGIPRGHFFAKNPGLMESLQHAKFFG--AE 170 Query: 465 LAAADPTNIFTLFGILPFYLP---GFMHVGIWP----IIMSLSMF-----IQMKMSPP-- 510 LA +LP GF + IIM ++F + K PP Sbjct: 171 LAGR--------------FLPMNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPES 216 Query: 511 ---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P + Q M++ P++++F+ SFP G+++YW SN+ ++ QQ ++++ Sbjct: 217 LTGPMAQQQKMMIYLFPLMYLFSGVSFPIGVMLYWCTSNLWTLGQQEILIR 267 >gi|224100107|ref|XP_002311746.1| 60 kDa inner membrane protein [Populus trichocarpa] gi|222851566|gb|EEE89113.1| 60 kDa inner membrane protein [Populus trichocarpa] Length = 281 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 26/225 (11%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L TV VK FPL+KKQ S M+++QP+I +++ + ++ Q +LY Sbjct: 62 YGFAIILLTVLVKAATFPLSKKQVESAMAMRSLQPQIKAVQQLYAGDQERI-QLETARLY 120 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAA----ADPTNIF 474 K INPLAGC P L IPV+ +Y+ +S ++ E + WI LA A+ N Sbjct: 121 KLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAERQNGS 180 Query: 475 TLFGILPFY----------------LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + + PF LP + V + MS+ + +Q S P K Sbjct: 181 GISWLFPFVDGQPPLGWSDTVAYLVLPAMLVVLQY---MSVQI-MQSSQSDDPNVKNSQA 236 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 I+ ++P++ + S P+GL +YW +N++S QQ + K+ GA+ Sbjct: 237 IMKFLPLMIGYFSLSVPSGLSLYWLTNNILSTTQQVWLQKLGGAK 281 >gi|323705845|ref|ZP_08117417.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium xylanolyticum LX-11] gi|323534841|gb|EGB24620.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium xylanolyticum LX-11] Length = 218 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 109/210 (51%), Gaps = 23/210 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + Y+ VGN+G+AI++ T+ ++++ P +Q + MK I P ++E+++K+ + P Sbjct: 11 LLKFIYDFVGNYGVAIIIFTILIRVILLPFYVQQMGTMRKMKEISPLVEEIKKKYAKD-P 69 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK N+NP++GC P+LL + + + ++ ++ A F W+K LA Sbjct: 70 QKMNEEMMKLYKEKNVNPMSGCLPMLLPLIILWPLFAMLRSYPAFSTASFL-WLKSLAEK 128 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I PI+ ++ +I M D Q + M + Sbjct: 129 DPYFIL-------------------PILSGVTTYISSAMI--QTDNNQKSMNLIMSAFMI 167 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + S PAG+ IYW SN+ IVQQ + ++ Sbjct: 168 WITVSLPAGVGIYWVTSNIFQIVQQYIFLR 197 >gi|313765030|gb|EFS36394.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL013PA1] Length = 359 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 51/231 (22%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ T+F++LL PL KQ S +M+ IQPK+ ++EK+ + Q+ M+ LY+ Sbjct: 54 LAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQE-MMNLYRD 112 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI-----------------SISLEMRHAPFWGWIKD 464 +NP A C P+LLQ+P+F A+++V+ + ++HA F+G + Sbjct: 113 EGVNPAASCLPVLLQMPIFLALFRVLDGASRGIPRGHFFAKNPGLMESLQHAKFFG--AE 170 Query: 465 LAAADPTNIFTLFGILPFYLP---GFMHVGIWP----IIMSLSMF-----IQMKMSPP-- 510 LA +LP GF + IIM ++F + K PP Sbjct: 171 LAGR--------------FLPMNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPES 216 Query: 511 ---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P + Q M++ P++++F+ SFP G+++YW SN+ ++ QQ ++++ Sbjct: 217 LTGPMAQQQKMMIYLFPLMYLFSGVSFPIGVMLYWCTSNLWTLGQQEILIR 267 >gi|270289895|ref|ZP_06196121.1| membrane protein oxaA [Pediococcus acidilactici 7_4] gi|270281432|gb|EFA27264.1| membrane protein oxaA [Pediococcus acidilactici 7_4] Length = 279 Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 22/210 (10%) Query: 352 YFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ---SP 407 Y + GN +G I++ TV ++++ PL Q ++ +QPK+ EL++K+ Sbjct: 50 YLSKICGNNYGWGIIVFTVLIRIIILPLMIYQTKTSMKTAELQPKLKELQQKYSSRDVET 109 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q L++ +LY +NP+AGC P+++Q+PV +A+Y +S + ++ F W++ L Sbjct: 110 QQKLREEQQKLYAEAGVNPMAGCLPLIIQLPVMYALYAAVSRTQVLKEGTFL-WLQ-LND 167 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVV 526 DP + ILP F + W + MK P A G + + MP++ Sbjct: 168 KDP------YYILPILAAFFTFLSTW---------LSMKAQPAGAQNGMTSAMTFGMPLI 212 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + +FPA + +YW +N+ + Q VI Sbjct: 213 ILITALNFPAAITLYWVVTNLFQVGQTLVI 242 >gi|314929150|gb|EFS92981.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL044PA1] gi|328905781|gb|EGG25557.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium sp. P08] Length = 359 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 51/231 (22%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ T+F++LL PL KQ S +M+ IQPK+ ++EK+ + Q+ M+ LY+ Sbjct: 54 LAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQE-MMNLYRE 112 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVIS-----------------ISLEMRHAPFWGWIKD 464 +NP A C P+LLQ+P+F A+++V+ + ++HA F+G + Sbjct: 113 EGVNPAASCLPVLLQMPIFLALFRVLDGASRGIPRGHFFAENPKLMESLQHAKFFG--AE 170 Query: 465 LAAADPTNIFTLFGILPFYLP---GFMHVGIWPIIMSLSM-----FIQMKM----SPP-- 510 LA +LP GF + +++ + M + Q+++ PP Sbjct: 171 LAGR--------------FLPMNNGFGGTQVVALVLIVVMVATLFYTQLQLMRKNMPPES 216 Query: 511 ---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P + Q M++ P++++F+ SFP G+++YW SN+ ++ QQ ++++ Sbjct: 217 LTGPMAQQQKMMIYLFPLMYLFSGVSFPIGVMLYWCTSNLWTLGQQEILIR 267 >gi|38502952|sp|Q83MN6|OXAA_TROWT RecName: Full=Membrane protein oxaA Length = 310 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 122/246 (49%), Gaps = 40/246 (16%) Query: 349 LMSYFYNLVGNFG----------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 ++ +F+ L+G G ++I+ + ++ P+ KQ + M I P++ Sbjct: 23 ILVFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLIPVFLKQIRAQRKMLEIAPEVRR 82 Query: 399 LREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS------ 448 ++EK+K Q + + M+++Y+ NPL+ C PI+LQ+PVFF +Y+VI Sbjct: 83 IQEKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLPIVLQMPVFFGLYQVIESAQNAG 142 Query: 449 ---------ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM-S 498 + ++ R + +G + L + + + L F L + G+ IM + Sbjct: 143 TGVGPLNGPLGMDFRDSRIFGVV-PLHDSFSHDFYALQAGQAFNLITMIVAGVLTAIMIA 201 Query: 499 LSMFIQMKMSPP--PAD-------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 + +F Q+K+ P P + K Q ++L +P++F+ SFP G++IYW+ SNV S Sbjct: 202 VQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFLGMGFSFPVGILIYWTASNVWS 261 Query: 550 IVQQAV 555 VQQAV Sbjct: 262 AVQQAV 267 >gi|313835175|gb|EFS72889.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL037PA2] gi|314970899|gb|EFT14997.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL037PA3] Length = 359 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 51/231 (22%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ T+F++LL PL KQ S +M+ IQPK+ ++EK+ + Q+ M+ LY+ Sbjct: 54 LAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQE-MMNLYRE 112 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVIS-----------------ISLEMRHAPFWGWIKD 464 +NP A C P+LLQ+P+F A+++V+ + ++HA F+G + Sbjct: 113 EGVNPAASCLPVLLQMPIFLALFRVLDGASRGIPRGHFFAENPKLMESLQHAKFFG--AE 170 Query: 465 LAAADPTNIFTLFGILPFYLP---GFMHVGIWPIIMSLSM-----FIQMKM----SPP-- 510 LA +LP GF + +++ + M + Q+++ PP Sbjct: 171 LAGR--------------FLPMNNGFGGTQVVALVLIVVMVATLFYTQLQLMRKNMPPES 216 Query: 511 ---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P + Q M++ P++++F+ SFP G+++YW SN+ ++ QQ ++++ Sbjct: 217 LTGPMAQQQKMMIYLFPLMYLFSGVSFPIGVMLYWCTSNLWTLGQQEILIR 267 >gi|304385852|ref|ZP_07368196.1| stage III sporulation protein J [Pediococcus acidilactici DSM 20284] gi|304328356|gb|EFL95578.1| stage III sporulation protein J [Pediococcus acidilactici DSM 20284] Length = 279 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 22/210 (10%) Query: 352 YFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ---SP 407 Y + GN +G I++ TV ++++ PL Q ++ +QPK+ EL++K+ Sbjct: 50 YLSKICGNNYGWGIIVFTVLIRIIILPLMIYQTKTSMKTAELQPKLKELQQKYSSRDVET 109 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q L++ +LY +NP+AGC P+++Q+PV +A+Y +S + ++ F W++ L Sbjct: 110 QQKLREEQQKLYAEAGVNPMAGCLPLIIQLPVMYALYAAVSRTQVLKEGTFL-WLQ-LND 167 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVV 526 DP + ILP F + W + MK P A G + + MP++ Sbjct: 168 KDP------YYILPILAAIFTFLSTW---------LSMKAQPAGAQNGMTSAMTFGMPLI 212 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + +FPA + +YW +N+ + Q VI Sbjct: 213 ILITALNFPAAITLYWVVTNLFQVGQTLVI 242 >gi|323467509|gb|ADX71196.1| Preprotein translocase subunit YidC [Lactobacillus helveticus H10] Length = 303 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 22/220 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ T+ ++++ PL ST M+ IQP+I Sbjct: 61 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIIRVILLPLNAISIRSTTKMQGIQPQI 120 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+L+Q+PV +A+Y I + ++ Sbjct: 121 NELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLPVMYALYGAILRTPQL 180 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W+ DL+ DP I + + + LS +I +P A Sbjct: 181 QTGRFL-WM-DLSKPDPYYIMPILAM---------------VFTFLSTYISQLATPKSAQ 223 Query: 514 KGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQ 552 G ++ + + V ++ F A + +YW SN+ VQ Sbjct: 224 NGMTKVMTYGMAIMVGVMALKFQAAITLYWVISNLFQAVQ 263 >gi|94985665|ref|YP_605029.1| 60 kDa inner membrane insertion protein [Deinococcus geothermalis DSM 11300] gi|94555946|gb|ABF45860.1| 60 kDa inner membrane insertion protein [Deinococcus geothermalis DSM 11300] Length = 526 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 80/267 (29%), Positives = 131/267 (49%), Gaps = 34/267 (12%) Query: 308 LFAGAKEFPTIHHYEKD-LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 ++ G E +H Y+ L +P L +F I+ + LM Y LVGN+G+ I+L Sbjct: 267 VYGGKNEL--VHLYQSGYLNLPG---LFQPNFFGQISLLIVKLMEGLYKLVGNWGLVIVL 321 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTH 422 T+ ++L+ +PL + Q +TA M+ +QPKI E+++K+K + +Q M QLY+ H Sbjct: 322 LTILLRLIMWPLMQAQGRTTARMQVMQPKIKEIQDKYKDKRDIESQRAMQMEMAQLYREH 381 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 N NP AGC+ L PV A++ I + E + W+ DLA D PF Sbjct: 382 NFNP-AGCFSTFLPFPVLIALWSTIR-NFEFDSG--FLWLPDLAVPD-----------PF 426 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 Y+ ++ + +++ M P + QA I ++F++ +FPAG+ IY Sbjct: 427 YILALIY-----LCVNIGQLYVMTRKNPDMFRQQAFIY----IIFLYFALTFPAGVTIYI 477 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDR 569 S +I I QQ +I + E I + Sbjct: 478 ILSTLIGIGQQILINRQVERETASIGQ 504 >gi|303240053|ref|ZP_07326574.1| membrane protein insertase, YidC/Oxa1 family [Acetivibrio cellulolyticus CD2] gi|302592322|gb|EFL62049.1| membrane protein insertase, YidC/Oxa1 family [Acetivibrio cellulolyticus CD2] Length = 285 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 72/271 (26%), Positives = 128/271 (47%), Gaps = 52/271 (19%) Query: 339 FYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 F +I K + +++++ Y + G +G+AI++ TVF+KL+ PL KQ+ S A ++ IQP I Sbjct: 5 FSYIPKFLGLILNFIYEHMSFGRYGLAIIIFTVFIKLVLLPLTVKQFKSNAQLQEIQPLI 64 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE---- 452 EL+ K+K + L + M+++Y H NP +GC P+L+Q+P+ F++ VI L Sbjct: 65 QELQRKYKNDNNK-LNEEMMKVYAEHKYNPASGCLPLLVQLPILFSLIYVIGQPLTYMLN 123 Query: 453 ---------MRHAP----FWGWIKDLAAADPTNIFTL------FGILPFYLPG------- 486 + P G+ + A + NI + G++P + P Sbjct: 124 YSTADINNLLNAVPEAMKIKGFYAQIGAVNFHNILNMKFLGLDLGLVPTWRPNVLFGPEM 183 Query: 487 --FMHVGIWPIIMSLSMFIQMKM--------------SPPPADKGQAMILNWM---PVVF 527 ++ + + PI+ ++ F+ K+ + D AM N P++ Sbjct: 184 GRYLPLILIPILSVITTFLSNKLMTAATMKKNNNSSGNDSAQDAAAAMTKNMTLIAPIMT 243 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ FPAGL +YW N+ I QQ + K Sbjct: 244 LWVSFQFPAGLGLYWLVGNIFQIFQQLYLNK 274 >gi|300727271|ref|ZP_07060687.1| putative membrane protein [Prevotella bryantii B14] gi|299775509|gb|EFI72103.1| putative membrane protein [Prevotella bryantii B14] Length = 641 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 148/609 (24%), Positives = 263/609 (43%), Gaps = 100/609 (16%) Query: 9 VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA------------- 55 V IAL +II Y W Y P EE+ +++ Q KQ + A Sbjct: 10 VLIAL-LIIGYGW---YTQPSEEEIKAQQE--QLAKQEEAKKKTEKAFKDAEKAKQEAAK 63 Query: 56 --VLIDDRA---QALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGY--H----LDVSS 103 +L D A AL+ + V L N + ++N KGA + ++ Y H D S Sbjct: 64 AKILEDTTALFHSALNGKAQTVTLHNDKIELTLNTKGATVEKAVIKNYVGHNIQVKDGSK 123 Query: 104 NSPIVTLLSPSN--------TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 + VTL + K A + TA+ E+ +S V+ + P Sbjct: 124 DQDKVTLFDQKDQALKFMLSAKEANIVTSELYFTAS--EVTDSTVVFTAEAA----PGKN 177 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 IKL + + + +S++ +T T + R + R + + AT T+ Sbjct: 178 IKLSYVLGKDYMLHMQLSVNGMSGIFAPNTNTMDVDWAERCRQQERGFSFENRYATLTYH 237 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 EG G L E K + EK E W+ +++++SV I + ++ Sbjct: 238 NTEG-----GTDYLNETKEAIDEK-----IEEKVDWVAFKNQFFSSVMIAKNDFQENALM 287 Query: 276 KYL-SDGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHHYE------KDLA 326 + D + Y ++ A T GK + +F + G +F + E KDL Sbjct: 288 TSIPQDKESGYLKQYQAKLKTFFDPTGKQPSEFDFYY-GPNDFRLLQKVESESNFGKDLE 346 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNL--------VGNFGIAIMLTTVFVKLLFFPL 378 + R L+ GW P+F +++ ++ L V GI ++L T+ +K++ +P+ Sbjct: 347 LQR---LVYLGW------PLFRIINRWFTLYVFDWLSQVFPMGIVLILITLLLKVITYPM 397 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQV-LQKAMIQLYKTHNINPLAGCWPILLQI 437 KK Y+S+A M+ ++PK++E +++ + Q+ Q+AM+ Y + ++PL+GC P+L+Q+ Sbjct: 398 VKKSYMSSAKMRVLKPKLEEATKQYDKPEDQMKKQQAMMAEYAKYGVSPLSGCLPMLIQM 457 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGI 492 P++ A++ + ++++R F WI DL+ DP TN++ L + L + G Sbjct: 458 PIWIAMFNFVPNAIQLRGESFL-WINDLSTYDPIFEWGTNLWMLGDHIS--LTCILFCGA 514 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVI 548 I+ S Q K Q ++ W MP++F F + + AGL Y+ + Sbjct: 515 -NILYSWFTMQQQKDQMVGQQAEQMKMMRWMMLLMPLMFFFMFNDYSAGLNFYY----FV 569 Query: 549 SIVQQAVIM 557 S+ A IM Sbjct: 570 SLFFSAAIM 578 >gi|72163513|ref|YP_291170.1| hypothetical protein Tfu_3114 [Thermobifida fusca YX] gi|71917245|gb|AAZ57147.1| putative membrane protein [Thermobifida fusca YX] Length = 308 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 72/252 (28%), Positives = 121/252 (48%), Gaps = 53/252 (21%) Query: 349 LMSYFYNLVGN--------------------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 ++ + YN+VG +G++I+L T+ V++L PL KQ + Sbjct: 1 MLDWLYNIVGQVLVWIHSGLSIFLDPDSGLAWGLSIVLLTILVRVLMIPLFVKQMNTQRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 ++ +QPK+ ++RE++K Q LQ+ I++Y+ NPL GC P+LLQ+PVFFA++ V+ Sbjct: 61 LQELQPKLLKVRERYKNDK-QRLQQEQIKIYQESGTNPLMGCLPLLLQMPVFFALFNVLR 119 Query: 449 ISLEMRHAPFWGWIKDLA-AADPTNIF---------------TLFGILPFYLPGFMHVGI 492 E A F G+ ++LA +A IF FG P + V Sbjct: 120 QIAE-GEAKF-GFTQELANSAQSALIFGAPIAAHFTSSADELAAFGADPIMAKVIIAVAC 177 Query: 493 WPIIMSLSMFIQMK-----------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 +IM + F+ M+ M P + Q +++ P +F L + P G++IY Sbjct: 178 --VIMGTTTFLTMRQSMSRTLKQPGMEDNPMVQSQKIMMYIAPAFGLFGL-AMPVGVLIY 234 Query: 542 WSWSNVISIVQQ 553 W SN+ ++ QQ Sbjct: 235 WVTSNLWTMGQQ 246 >gi|330253081|gb|AEC08175.1| inner membrane protein ALBINO3 [Arabidopsis thaliana] Length = 432 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 116/244 (47%), Gaps = 42/244 (17%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M +++ + + +G AI+L T+ VK +PL K+Q ST M+ Sbjct: 111 GWFGFISDAMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQ 170 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG-CWPILLQIPVFFAIYKVIS- 448 N+QPKI +++++ + ++ Q +LYK +NPLAG W L P A + S Sbjct: 171 NLQPKIKAIQQRYAGNQERI-QLETSRLYKQAGVNPLAGFFWIPSLGGPTSIAARQSGSG 229 Query: 449 ----ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 H P GW +A YL + P+++ S ++ Sbjct: 230 ISWLFPFVDGHPPL-GWYDTVA----------------YL-------VLPVLLIASQYVS 265 Query: 505 MK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 M+ M PP PA K ++ ++P++ + S P+GL IYW +NV+S QQ + K+ Sbjct: 266 MEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWLTNNVLSTAQQVYLRKL 325 Query: 560 HGAE 563 GA+ Sbjct: 326 GGAK 329 >gi|56965876|ref|YP_177610.1| stage III sporulation protein J [Bacillus clausii KSM-K16] gi|56912122|dbj|BAD66650.1| stage III sporulation protein J [Bacillus clausii KSM-K16] Length = 284 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 24/232 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W F P+ L+ V ++G AI++ TV +++ PL KQ S M+ +QP++ Sbjct: 35 WNSFFVYPLSRLIILIAGWVSSYGWAIIVVTVLFRIVLLPLMVKQTKSMKAMQQLQPEMQ 94 Query: 398 ELREKF--KQSPPQV-LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +LR+K+ K Q+ L M +L+ H +NP AGC P+L+Q+P+F AIY I MR Sbjct: 95 KLRQKYSAKDKNTQMQLNTEMQKLFSEHKVNPFAGCLPLLVQMPIFLAIYHAI-----MR 149 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F G + F L P++ I P++ + FIQ KM + Sbjct: 150 TPNFQG--------ESFAWFVLNNPDPYF--------ILPVLACILTFIQQKMMMVQDNP 193 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 ++L MP++ + PA +I+YW N+ I+Q I + + GL Sbjct: 194 QMKILLYAMPIMILVVGIFLPAAVILYWVVGNIFMIMQTYFITGPNAGKRGL 245 >gi|331268192|ref|YP_004394684.1| membrane protein oxaA [Clostridium botulinum BKT015925] gi|329124742|gb|AEB74687.1| Membrane protein oxaA [Clostridium botulinum BKT015925] Length = 220 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/236 (28%), Positives = 120/236 (50%), Gaps = 30/236 (12%) Query: 348 MLMSYFYNLVGN----FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 M+ S+ + L N +G+ I++ T+ ++++ FPL KQ S M IQP++ +L+EK+ Sbjct: 1 MIHSWVHTLFTNPNISYGLTIIVLTLIIRIVLFPLNYKQIKSQVGMTEIQPELKKLQEKY 60 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K PQ Q+ M++LYK + +NPL GC P+L+Q P+ A++ V + Sbjct: 61 KND-PQRQQQEMMKLYKEYGVNPLGGCLPLLVQWPILIALFYVFN--------------- 104 Query: 464 DLAAADPTNI-FTLFGIL---PFYL-PGFMHVGIWPIIMS-LSMFIQMKMSPPPADKGQA 517 +L+ +P+ + T G+ P L P + + I PI+ + L+ F + M+ AD Q Sbjct: 105 NLSKIEPSIVNVTFLGVKLMEPAILKPEYWYTWILPIVSALLTYFSTVIMTSKNADSAQV 164 Query: 518 ----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 M+ +M + V+ FP L++YW +++ I Q + + + LI Sbjct: 165 KQTKMMSGFMTLFVVYMSFKFPTALVLYWITNSLFQIGQTIITQRSQQKKKELIQE 220 >gi|328555787|gb|AEB26279.1| OxaA-like protein precursor [Bacillus amyloliquefaciens TA208] gi|328914176|gb|AEB65772.1| Inner membrane protein oxaA [Bacillus amyloliquefaciens LL3] Length = 249 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 120/227 (52%), Gaps = 30/227 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ +++Y L G N+G++I++ T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 26 WDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTILIRLLILPLMIKQLRSSKAMQALQPEM 85 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q Q LQ+ + L+ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 86 QKLREKYSSKDQKTQQKLQQETMALFSKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 145 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSPP 510 +H+ W DL D P+Y I PI+ ++ F+Q K M+ Sbjct: 146 SQHSFLWF---DLGEKD-----------PYY--------ILPIVAGVATFVQQKLMMAGN 183 Query: 511 PADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P+ Q ++ W MP++ + +FP+ L +YW N+ I Q +I Sbjct: 184 PSQNPQMAMMVWIMPIMIIVFAINFPSALSLYWVVGNLFMIAQTFLI 230 >gi|218291090|ref|ZP_03495113.1| 60 kDa inner membrane insertion protein [Alicyclobacillus acidocaldarius LAA1] gi|218238975|gb|EED06182.1| 60 kDa inner membrane insertion protein [Alicyclobacillus acidocaldarius LAA1] Length = 342 Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 110/207 (53%), Gaps = 26/207 (12%) Query: 349 LMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 LM YF +L GN +GI+I+L + V+L+ PL +Q M +QP+I ++R K+K Sbjct: 51 LMDYFAHLFGNDYGISILLMAILVRLVVLPLFLRQIRFQRAMVKLQPEIQKIRTKYKFDN 110 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q +Q+ +++LY+ +NPLAGC+P+L+Q+P +A Y I ++ MR + F G Sbjct: 111 -QKMQEELMKLYQEAGMNPLAGCFPMLIQLPFLWAFYGAIVGNVGMRQSTFLG------- 162 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMS--LSMFIQMKMSPPPADKGQAMILNWMPV 525 IF L Y I P++ + + + M P + ++M+ + + Sbjct: 163 -----IFPLGHWDTHY--------ILPVLAALSTLLSSWLSMQSQPVQQ-KSMLFVYPLM 208 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQ 552 +F FA P GL++YW ++N++ +Q Sbjct: 209 IFFFAF-RLPGGLVLYWIYTNLLVALQ 234 >gi|293376115|ref|ZP_06622365.1| putative stage III sporulation protein J [Turicibacter sanguinis PC909] gi|325845257|ref|ZP_08168561.1| putative stage III sporulation protein J [Turicibacter sp. HGF1] gi|292645269|gb|EFF63329.1| putative stage III sporulation protein J [Turicibacter sanguinis PC909] gi|325488698|gb|EGC91103.1| putative stage III sporulation protein J [Turicibacter sp. HGF1] Length = 261 Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 113/224 (50%), Gaps = 21/224 (9%) Query: 345 PMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+ +++ YN++ N G AI+L T ++L+ PL K S A M+ IQP++ ++++K+ Sbjct: 44 PLATFITFLYNILSQNLGFAIILATAIIRLILMPLYSKSNKSMAVMQEIQPEMQKIQKKY 103 Query: 404 KQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 + Q +Q M+ LYK +N NP+ GC LQ+PVF A Y+ IS RH Sbjct: 104 ENKKDQASQAKMQTEMMDLYKKYNYNPMMGCILPFLQMPVFLAFYQAIS-----RHP--- 155 Query: 460 GWIKDLAAADPTNI-FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 IKD AAA+ I G +P Y+ F+ G+ I+S M + S ++ M Sbjct: 156 -LIKDAAAAEFFGINLGATGTMPNYILAFIVAGL--TILSQRMMNKNMASSAQQNQTSNM 212 Query: 519 ILNWMPVVFVFALSSF----PAGLIIYWSWSNVISIVQQAVIMK 558 ++ M F FA+ S P +Y+ +++IVQ + K Sbjct: 213 MMKVMTYYFPFAMFSITIGTPFAFGLYFLTGQIMTIVQYLIFKK 256 >gi|28572956|ref|NP_789736.1| putative inner membrane protein translocase component YidC [Tropheryma whipplei TW08/27] gi|38502953|sp|Q83N53|OXAA_TROW8 RecName: Full=Membrane protein oxaA gi|28411089|emb|CAD67474.1| conserved integral membrane protein [Tropheryma whipplei TW08/27] Length = 310 Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 122/246 (49%), Gaps = 40/246 (16%) Query: 349 LMSYFYNLVGNFG----------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 ++ +F+ L+G G ++I+ + ++ P+ KQ + M I P++ Sbjct: 23 ILVFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLIPVFLKQIRAQRKMLEIAPEVRR 82 Query: 399 LREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS------ 448 ++EK+K Q + + M+++Y+ NPL+ C PI+LQ+PVFF +Y+VI Sbjct: 83 IQEKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLPIVLQMPVFFGLYQVIESAQNAG 142 Query: 449 ---------ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM-S 498 + ++ R + +G + L + + + L F L + G+ IM + Sbjct: 143 TGVGPLNGPLGMDFRDSRIFGVV-PLHDSFSHDFYALQAGQAFNLITMIVAGVLTAIMIA 201 Query: 499 LSMFIQMKMSPP--PAD-------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 + +F Q+K+ P P + K Q ++L +P++F+ SFP G++IYW+ SNV S Sbjct: 202 VQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFLGMGFSFPVGILIYWTASNVWS 261 Query: 550 IVQQAV 555 VQQAV Sbjct: 262 GVQQAV 267 >gi|110802031|ref|YP_699906.1| putative inner membrane protein translocase component YidC [Clostridium perfringens SM101] gi|110682532|gb|ABG85902.1| membrane protein OxaA [Clostridium perfringens SM101] Length = 238 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 20/176 (11%) Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 KQ S M+ IQP+I +L++K+K +P + Q+ M++LYK +N+NP++GC P+L+Q+P+ Sbjct: 56 KQTRSQQKMQEIQPEIAKLQKKYKNNPEKA-QQEMMKLYKENNVNPMSGCLPLLIQMPIL 114 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 FA+Y V E++ F W+ DL A D T I + YL + ++ Sbjct: 115 FALYYVFYGLGELKGVSFL-WLGDLWAPDRTFILPILSAATTYLSSLL----------MT 163 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALS----SFPAGLIIYWSWSNVISIVQ 552 F Q + P M +N M +V + FP+ L++YW N+I +VQ Sbjct: 164 KFTQSQTGGAPG----GMNMNTMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQ 215 >gi|330996282|ref|ZP_08320167.1| membrane protein insertase, YidC/Oxa1 family domain protein [Paraprevotella xylaniphila YIT 11841] gi|329573474|gb|EGG55081.1| membrane protein insertase, YidC/Oxa1 family domain protein [Paraprevotella xylaniphila YIT 11841] Length = 629 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 90/337 (26%), Positives = 160/337 (47%), Gaps = 57/337 (16%) Query: 250 SWLGISDKYWASVFIPSKE--------TSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 W+ +++++ V I ++ T YL D A + F N GK+ Sbjct: 252 DWVAFKNQFFSCVLIAHQDFTEAHLSSTPQQKASGYLKDYEADMKTFFDPN------GKT 305 Query: 302 ITTTNFLFAGAKEFPTIHHY------EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY- 354 T LFA + + H +KDL + E L+ GW P+F ++ F+ Sbjct: 306 PTQMQMLFA-PNNYHLLQHTNKLSASDKDLEL---EDLVYLGW------PLFKWINRFFI 355 Query: 355 --------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQ 405 +L + GI ++L T+ VK+L +P +K Y+S+A M+ ++PKIDEL K+ K Sbjct: 356 IYIFDWLSSLGLSMGIVLLLLTILVKVLVYPTTRKSYLSSAKMRVLKPKIDELNAKYPKP 415 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q+ +QLY + ++P+ GC P+LLQ+P++ A++ + ++E+R F W DL Sbjct: 416 EDAMKKQQETMQLYSQYGVSPMGGCLPMLLQMPIWIALFNFVPNAIELRGESFL-WASDL 474 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI---------QMKMSPPPADKGQ 516 +A D + +L G H+ I+ ++ L+ + Q M+ A + + Sbjct: 475 SAYDDVIRWD----KSIWLIG-DHLSIFCLLFCLTNIVNTWITMRQQQNSMTGEQAQQMK 529 Query: 517 AM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 M ++ MPV F F +++ +GL Y+ S + SI+ Sbjct: 530 LMQYMMYIMPVAFFFMFNNYSSGLNYYYFLSGLTSIL 566 >gi|308175811|ref|YP_003922516.1| Inner membrane protein oxaA [Bacillus amyloliquefaciens DSM 7] gi|307608675|emb|CBI45046.1| Inner membrane protein oxaA [Bacillus amyloliquefaciens DSM 7] Length = 259 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 120/227 (52%), Gaps = 30/227 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ +++Y L G N+G++I++ T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 36 WDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTILIRLLILPLMIKQLRSSKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q Q LQ+ + L+ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 96 QKLREKYSSKDQKTQQKLQQETMALFSKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 155 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSPP 510 +H+ W DL D P+Y I PI+ ++ F+Q K M+ Sbjct: 156 SQHSFLWF---DLGEKD-----------PYY--------ILPIVAGVATFVQQKLMMAGN 193 Query: 511 PADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P+ Q ++ W MP++ + +FP+ L +YW N+ I Q +I Sbjct: 194 PSQNPQMAMMVWIMPIMIIVFAINFPSALSLYWVVGNLFMIAQTFLI 240 >gi|182626422|ref|ZP_02954175.1| membrane protein OxaA [Clostridium perfringens D str. JGS1721] gi|177908296|gb|EDT70849.1| membrane protein OxaA [Clostridium perfringens D str. JGS1721] Length = 238 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 20/176 (11%) Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 KQ S M+ IQP+I +L++K+K +P + Q+ M++LYK +N+NP++GC P+L+Q+P+ Sbjct: 56 KQTRSQQKMQEIQPEIAKLQKKYKNNPEKA-QQEMMKLYKENNVNPMSGCLPLLIQMPIL 114 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 FA+Y V E++ F W+ DL A D T I + YL + ++ Sbjct: 115 FALYYVFYGLGELKGVSFL-WLGDLWAPDRTFILPILSAATTYLSSLL----------MT 163 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALS----SFPAGLIIYWSWSNVISIVQ 552 F Q + P M +N M +V + FP+ L++YW N+I +VQ Sbjct: 164 KFTQSQAGGAPG----GMNMNTMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQ 215 >gi|313886342|ref|ZP_07820067.1| membrane protein insertase, YidC/Oxa1 family [Porphyromonas asaccharolytica PR426713P-I] gi|332300282|ref|YP_004442203.1| Membrane protein oxaA [Porphyromonas asaccharolytica DSM 20707] gi|312924211|gb|EFR34995.1| membrane protein insertase, YidC/Oxa1 family [Porphyromonas asaccharolytica PR426713P-I] gi|332177345|gb|AEE13035.1| Membrane protein oxaA [Porphyromonas asaccharolytica DSM 20707] Length = 626 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 90/356 (25%), Positives = 171/356 (48%), Gaps = 52/356 (14%) Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET-------SFHSQFK---YLSDG 281 +K + + + E W+ + DK++++V I +T SF ++ K Y+ Sbjct: 235 EKLKETKMEQEKDVREKIQWVAMKDKFFSTVLIGLGDTRLEGNKMSFKTEPKETDYIK-- 292 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 Y+ F+ + I G+ LF G ++ + D + + + L D + Sbjct: 293 VCNYKGSFAMD---IRDGRKADFA--LFMGPLDYNMLKGM--DAGVDKAQRL-DLKRMIY 344 Query: 342 IAKPMFM---------LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + +F L+ + + N+GI I+L T+ +KL+ PL K Y+S A M+ + Sbjct: 345 VGGSLFRWINVTLIRPLIDFLQGFISNWGIIILLLTLIIKLVLSPLTFKSYMSQAKMRVL 404 Query: 393 QPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +P+++ + K+ Q++ K A +QLY+ +P++GC P+LLQ+P A+Y Sbjct: 405 KPQVEAINAKYAGDDQQMMMKRSQATMQLYRNAGASPMSGCLPMLLQMPFLIALYMFFPT 464 Query: 450 SLEMRHAPFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI- 503 ++++R F W+KDL+ DP T+I + G+L G H+ ++ ++ +++ I Sbjct: 465 AIDLRGESFL-WVKDLSTYDPIISWSTDIPFITGLL-----GGNHISLFCLLWAVTNIIY 518 Query: 504 ---QMKMSPPPADKGQAMILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M MS AD Q ++ +MP ++F +S AGL Y+ S +I+I+Q Sbjct: 519 SRYTMSMS-AGADNSQMKMMRFMPYIMTIMFFIFFNSNAAGLTYYYFISTLITILQ 573 >gi|154688209|ref|YP_001423370.1| OxaA-like protein precursor [Bacillus amyloliquefaciens FZB42] gi|154354060|gb|ABS76139.1| SpoIIIJ [Bacillus amyloliquefaciens FZB42] Length = 259 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 119/227 (52%), Gaps = 30/227 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ +++Y L G N+G++I++ T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 36 WDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTILIRLLILPLMIKQLRSSKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q Q LQ+ + L+ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 96 QKLREKYSSKDQKTQQKLQQETMALFSKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 155 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSPP 510 +H+ W DL D P+Y I PI+ ++ F+Q K M+ Sbjct: 156 SQHSFLWF---DLGEKD-----------PYY--------ILPIVAGVATFVQQKLMMAGN 193 Query: 511 PADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P Q ++ W MP++ + +FP+ L +YW N+ I Q +I Sbjct: 194 PTQNPQMAMMVWIMPIMIIVFAINFPSALSLYWVVGNLFMIAQTFLI 240 >gi|304318135|ref|YP_003853280.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779637|gb|ADL70196.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 218 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 107/210 (50%), Gaps = 23/210 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + Y+ VGN+G+AI++ T+ ++++ P +Q + MK I P +++L++K+ + P Sbjct: 11 LLKFIYDFVGNYGVAIIIFTILIRIVLLPFYVQQMGTMKKMKEINPLVEDLKKKYAKD-P 69 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q L + M++LYK N+NP++GC P+LL + + + ++ ++ A F W+K LA Sbjct: 70 QKLNEEMMKLYKEKNVNPMSGCLPMLLPLVILWPLFAMLRNYPAFSTASFL-WLKSLAEK 128 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I PI+ ++ +I M D Q + M + Sbjct: 129 DPYFIL-------------------PILSGVTTYISSAMI--QTDNSQKSMNLIMSAFMI 167 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + S PAG+ IYW SN+ I QQ ++ Sbjct: 168 WITVSLPAGIGIYWVTSNIFQIAQQYFFLR 197 >gi|226315530|ref|YP_002775426.1| membrane protein OxaA precursor [Brevibacillus brevis NBRC 100599] gi|226098480|dbj|BAH46922.1| membrane protein OxaA precursor [Brevibacillus brevis NBRC 100599] Length = 252 Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 115/219 (52%), Gaps = 27/219 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L+ L+GN +G+ I++ T+ ++++ PL KQ S+ M+ IQP++ Sbjct: 37 WDKYFVYPLSWLIKESALLLGNNYGLGILVATIIIRIIVLPLMVKQIKSSKKMQEIQPEM 96 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++REK+K PQ Q + +++ +NPLAGC P+L+Q+P+ A Y I + E+ Sbjct: 97 QKIREKYKND-PQKAQAETMAMFQKSGVNPLAGCLPMLVQMPILIAFYHAIIRTSEINSQ 155 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 F W+ L D P+Y I PII +++ ++Q KM A++G Sbjct: 156 TFM-WL-TLGQKD-----------PYY--------ILPIIAAITTYLQSKMM-GQANQGN 193 Query: 517 AMILNWMPVVFVFALS---SFPAGLIIYWSWSNVISIVQ 552 + + ++ + L+ + P+ L +YW + N+ +IVQ Sbjct: 194 PQMQMMIIMMPLMILAIAVTLPSALSLYWVYGNLFTIVQ 232 >gi|315105159|gb|EFT77135.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL050PA2] Length = 359 Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 51/231 (22%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ T+F++LL PL KQ S +M+ IQPK+ ++EK+ + Q+ M+ LY+ Sbjct: 54 LAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQE-MMNLYRE 112 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI-----------------SISLEMRHAPFWGWIKD 464 +NP A C P+LLQ+P+F A+++V+ + ++HA F+G + Sbjct: 113 EGVNPAASCLPVLLQMPIFLALFRVLDGASRGIPRGHFFAKNPGLMESLQHAKFFG--AE 170 Query: 465 LAAADPTNIFTLFGILPFYLP---GFMHVGIWP----IIMSLSMF-----IQMKMSPP-- 510 LA +LP GF + IIM ++F + K PP Sbjct: 171 LAGR--------------FLPMNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPES 216 Query: 511 ---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P + Q +++ P++++F+ SFP G+++YW SN+ ++ QQ ++++ Sbjct: 217 LTGPMAQQQKIMIYLFPLMYLFSGVSFPIGVMLYWCTSNLWTLGQQEILIR 267 >gi|161508219|ref|YP_001578190.1| stage III sporulation protein [Lactobacillus helveticus DPC 4571] gi|160349208|gb|ABX27882.1| Stage III sporulation protein [Lactobacillus helveticus DPC 4571] Length = 291 Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 22/220 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ T+ ++++ PL ST M+ IQP+I Sbjct: 49 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIIRVILLPLNAISIRSTTKMQGIQPQI 108 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+L+Q+PV +A+Y I + ++ Sbjct: 109 NELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLPVMYALYGAILRTPQL 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W+ DL+ DP I + + + LS +I +P A Sbjct: 169 QTGRFL-WM-DLSKPDPYYIMPILAM---------------VFTFLSTYISQLATPKSAQ 211 Query: 514 KGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQ 552 G ++ + + V ++ +F + + +YW SN+ VQ Sbjct: 212 NGMTKVMTYGMAIMVGVMALNFQSAITLYWVISNLFQAVQ 251 >gi|260101881|ref|ZP_05752118.1| stage III sporulation protein J [Lactobacillus helveticus DSM 20075] gi|260084309|gb|EEW68429.1| stage III sporulation protein J [Lactobacillus helveticus DSM 20075] gi|328463993|gb|EGF35491.1| stage III sporulation protein [Lactobacillus helveticus MTCC 5463] Length = 298 Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 22/220 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ T+ ++++ PL ST M+ IQP+I Sbjct: 56 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIIRVILLPLNAISIRSTTKMQGIQPQI 115 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+L+Q+PV +A+Y I + ++ Sbjct: 116 NELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLPVMYALYGAILRTPQL 175 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W+ DL+ DP I + + + LS +I +P A Sbjct: 176 QTGRFL-WM-DLSKPDPYYIMPILAM---------------VFTFLSTYISQLATPKSAQ 218 Query: 514 KGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQ 552 G ++ + + V ++ +F + + +YW SN+ VQ Sbjct: 219 NGMTKVMTYGMAIIVGVMALNFQSAITLYWVISNLFQAVQ 258 >gi|224550133|gb|ACN54151.1| 60 kDa inner membrane protein [Wolbachia endosymbiont of Nasonia longicornis] Length = 125 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 1/118 (0%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFL 308 +W G +DKYW + IP K + K+ + + ++QA F ILP S +T N+ Sbjct: 7 NWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNIDKFQADFVRPYTHILPDTSASTLNYF 66 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 FAGAK+ + Y+ L IP F+ +D+G YFI KP+F+L+ YF ++ NFG AI+L Sbjct: 67 FAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGKAILL 124 >gi|315039282|ref|YP_004032850.1| stage III sporulation protein J [Lactobacillus amylovorus GRL 1112] gi|325957756|ref|YP_004293168.1| stage III sporulation protein J [Lactobacillus acidophilus 30SC] gi|312277415|gb|ADQ60055.1| stage III sporulation protein J [Lactobacillus amylovorus GRL 1112] gi|325334321|gb|ADZ08229.1| stage III sporulation protein J [Lactobacillus acidophilus 30SC] gi|327184389|gb|AEA32836.1| stage III sporulation protein J [Lactobacillus amylovorus GRL 1118] Length = 298 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 22/220 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ TV V+++ PL ST M++IQP+I Sbjct: 56 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTVIVRVILLPLNAISIRSTTKMQSIQPQI 115 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP AGC P+++Q+PV +A+Y I + ++ Sbjct: 116 NELRKKYPGRDTESRSLLQQETNKLYKEAGVNPYAGCLPLIIQLPVMYALYGAILRTPQL 175 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W+ DL+ DP + I+P F LS +I +P + Sbjct: 176 QTGRFL-WM-DLSKPDP------YFIMPILAMAFTF---------LSTYISQLSTPASSQ 218 Query: 514 KGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQ 552 G I+ + + V ++ F + + +YW SN+ VQ Sbjct: 219 NGMTKIMTYGMSIMVGVMALQFQSAITLYWVISNLFQAVQ 258 >gi|19703356|ref|NP_602918.1| inner membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328798|ref|ZP_06871312.1| stage III sporulation protein J [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|38503076|sp|Q8RHA4|OXAA_FUSNN RecName: Full=Inner membrane protein oxaA gi|19713418|gb|AAL94217.1| Inner membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154133|gb|EFG94937.1| stage III sporulation protein J [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 205 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 117/224 (52%), Gaps = 37/224 (16%) Query: 350 MSYFYNL---------------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 MSY YNL VGNFGI+I++ T+ +K++ PL KQ S MK +QP Sbjct: 1 MSYIYNLLKQFLAFLLNTTDKYVGNFGISIIIVTILIKIILLPLTLKQDKSMKEMKKLQP 60 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++++++K+ Q+L ++LY+ H +NPL GC PIL+Q+P+ FA++ V+ + Sbjct: 61 ELEKIKQKYAND-KQMLNIKTMELYREHKVNPLGGCLPILVQLPILFALFGVLRSGIIPA 119 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + F W++ ADP PFY + P++ F+Q K+ + Sbjct: 120 DSSFL-WMR---LADPD---------PFY--------VLPVLNGAVSFLQQKLMGTSDNA 158 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ P++ + P+GL +YW S++I+++QQ IMK Sbjct: 159 QMKNMMYVFPIMMIVISYRMPSGLQLYWLTSSLIAVIQQYFIMK 202 >gi|153956073|ref|YP_001396838.1| hypothetical protein CKL_3476 [Clostridium kluyveri DSM 555] gi|219856408|ref|YP_002473530.1| hypothetical protein CKR_3065 [Clostridium kluyveri NBRC 12016] gi|146348931|gb|EDK35467.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] gi|219570132|dbj|BAH08116.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 297 Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 83/143 (58%), Gaps = 14/143 (9%) Query: 341 FIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FIA P+ L+ + Y + N+G+AI+ TV +K L PL KQY + + + NIQ K+ E Sbjct: 4 FIAFPIGHLLKFIYEHIAFNNYGVAIIELTVIIKTLLLPLYIKQYHAASGISNIQYKVQE 63 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +++K K + ++ Q+ M +LYK +N+NP +GC P+L Q+P+ F++Y V+S L Sbjct: 64 IQKKHKNNKEKLNQEIM-KLYKENNVNPASGCLPLLFQMPILFSLYYVVSQPL------- 115 Query: 459 WGWIKDLAAADPTNIFTLFGILP 481 K + P I LF ++P Sbjct: 116 ----KYMTGKSPAAIQQLFEMIP 134 >gi|257452994|ref|ZP_05618293.1| inner membrane protein [Fusobacterium sp. 3_1_5R] gi|257466625|ref|ZP_05630936.1| inner membrane protein [Fusobacterium gonidiaformans ATCC 25563] gi|315917780|ref|ZP_07914020.1| inner membrane protein oxaA [Fusobacterium gonidiaformans ATCC 25563] gi|317059534|ref|ZP_07924019.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_5R] gi|313685210|gb|EFS22045.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_5R] gi|313691655|gb|EFS28490.1| inner membrane protein oxaA [Fusobacterium gonidiaformans ATCC 25563] Length = 205 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 109/204 (53%), Gaps = 22/204 (10%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 N+V NFGI+I++ T+ V+++ PL KQ S MK IQP+++ L+EK+ Q+L + Sbjct: 21 NVVQNFGISIIIATIIVRIILLPLTLKQDKSMKAMKKIQPELEILKEKYGND-KQLLNQK 79 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 ++LY+ H +NP GC P+L+Q+P+ FA++ V+ + + F W+ +L D Sbjct: 80 TMELYQKHKVNPAGGCLPLLVQLPILFALFGVLRGGIIPEDSKFL-WL-ELTKPD----- 132 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 PFY I+P++ F Q K+ + ++ P++ +F Sbjct: 133 ------PFY--------IFPLLNGAISFFQQKLMGNSDNPQMKNMMYMFPIMMIFISYKM 178 Query: 535 PAGLIIYWSWSNVISIVQQAVIMK 558 P GL +YW S++ +++QQ IMK Sbjct: 179 PGGLQLYWLTSSLTAVLQQYFIMK 202 >gi|312897432|ref|ZP_07756856.1| putative OxaA-like protein [Megasphaera micronuciformis F0359] gi|310621493|gb|EFQ05029.1| putative OxaA-like protein [Megasphaera micronuciformis F0359] Length = 217 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 29/210 (13%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++GIAI++ T+ +KL+ PL KQ S M+ +QPKI EL++K+K + + +Q+ M +L Sbjct: 26 SYGIAIIMLTIIIKLVLSPLTAKQIRSMEGMQLLQPKIKELQKKYKGNQKK-MQEEMSKL 84 Query: 419 YKTHNINPLAGCWPILLQIPVFFAI-YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 Y+ +NPL+GC PIL+Q+P +I Y + S + + F W+ L D T I Sbjct: 85 YREMGVNPLSGCLPILIQMPFLVSIFYALRSYPYDPAYESFL-WLSSLGQPDETYIL--- 140 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFI---QMKMSPPPADKGQAMILNWMPV---VFVFAL 531 P++ +LS F+ QM + P A+ QAM M V +F+ + Sbjct: 141 ----------------PVLSALSTFLIQKQMTGAQPDAEGPQAMQQKIMKVAMPLFIGWI 184 Query: 532 S-SFPAGLIIYWSWSNVISIVQQAVIMKMH 560 S +FP+GL+IYW SNV QQ ++ ++ Sbjct: 185 SLTFPSGLVIYWIISNVFQGAQQMIMGRLK 214 >gi|291303914|ref|YP_003515192.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis DSM 44728] gi|290573134|gb|ADD46099.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis DSM 44728] Length = 366 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 34/232 (14%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ V ++++ FPL KQ S M+ +QPK+ EL++++K + LQK M++LY+T Sbjct: 43 LAIVFLVVTIRIVLFPLFVKQIKSQRAMQRLQPKMKELQQRYKGDR-ETLQKEMMELYRT 101 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI-------------------------SISLEMRHA 456 NPL GC P+LLQ PVF A+ V+ +I+ ++ A Sbjct: 102 EKANPLMGCLPMLLQAPVFIALLWVLRRIDPDKYSNYAKTLYTWTEAQWDSAINAKLFGA 161 Query: 457 PFWGWI----KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 P W KDL ++ + T L L + + + + L+ + + A Sbjct: 162 PIWATFLTTQKDLKCSEHYDSCTTAATLNVQLVSGILIALMIVTTYLTTRQMILKTGWNA 221 Query: 513 DKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 D Q MI M PV+ +F+ FP G+++YW +N S+ QQ +++ + Sbjct: 222 DPQQRMIQKLMLYGIPVMLLFSGGIFPIGVVLYWVVNNAFSLGQQIWVLRKY 273 >gi|328958800|ref|YP_004376186.1| OxaA-like protein precursor [Carnobacterium sp. 17-4] gi|328675124|gb|AEB31170.1| OxaA-like protein precursor [Carnobacterium sp. 17-4] Length = 267 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 21/202 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQSPPQV-LQKA 414 G++G+ I++ T+ ++L+ P+ Q ST M +QP++ EL+ K+ K + Q L++ Sbjct: 48 GSYGVGIIVFTLIIRLILLPVMHGQTKSTRKMSELQPQLKELQTKYASKDTDTQSKLKEE 107 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY +NP+AGC P+L+Q+PV A+Y+ IS + ++ F W+ +L A DP Sbjct: 108 TSKLYSEAGVNPVAGCLPLLIQMPVLIAMYQAISRTEVLKTGNFL-WM-NLGAPDP---- 161 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + ILP I I++ + MS A+ +L MP + +F + Sbjct: 162 --YFILP----------ILAAILTFATTKLSTMSQAEANPTTTTMLYVMPALILFMGITL 209 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 P+ L +YW N S+ Q ++ Sbjct: 210 PSALSLYWVVGNAFSVAQTLLL 231 >gi|20809127|ref|NP_624298.1| preprotein translocase subunit YidC [Thermoanaerobacter tengcongensis MB4] gi|38503074|sp|Q8R6K6|OXAA_THETN RecName: Full=Membrane protein oxaA gi|20517807|gb|AAM25902.1| Preprotein translocase subunit YidC [Thermoanaerobacter tengcongensis MB4] Length = 206 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + L+ + ++ VGN+G+AI++ TVF+++L P +Q MK IQP ++EL++ Sbjct: 4 IAMYLGQLLEFIHHYVGNYGVAIIVFTVFIRILLLPFYIQQMAMMKKMKEIQPLVEELKK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + PQ L ++LY+ INP GC P+LL + + + ++ ++ A F W Sbjct: 64 KYGKD-PQKLNMETMKLYQEKKINPFGGCLPMLLPLIILWPLFTMLRTYPAFSTASFL-W 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + LA DP I PI+ +++ +I M DK Q + Sbjct: 122 MHSLAERDPYYII-------------------PILATVTTYISSAMV--ATDKSQNSMNI 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M + + + PAG+ IYW SN+ IVQQ + M+ Sbjct: 161 MMSLFMGWITVTLPAGVGIYWVTSNIFQIVQQYIFMR 197 >gi|15644210|ref|NP_229260.1| inner membrane protein, putative [Thermotoga maritima MSB8] gi|38503261|sp|Q9X1H2|OXAA_THEMA RecName: Full=Inner membrane protein oxaA gi|4982026|gb|AAD36529.1|AE001797_9 inner membrane protein, putative [Thermotoga maritima MSB8] Length = 445 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 104/198 (52%), Gaps = 24/198 (12%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +L NFG AIML T+ V+L+ +PL Q S NM+ +QP+I+ +++K+K Q Q+A Sbjct: 243 DLTKNFGWAIMLFTLIVRLILYPLYHAQTKSLINMRKLQPQIEAIKKKYKDPTKQ--QEA 300 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRHAPFWGWIKDLAAADPTN 472 +++LY+ +NP +GC +L+Q+P+F ++ VI +E F W KDL+A Sbjct: 301 LLKLYREAGVNPASGCLMLLIQLPIFMLLWSVIRYYVEEFAYSGSFLIW-KDLSAG---- 355 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 GF + ++ +I ++ + ++ A I+ M V+F F Sbjct: 356 -------------GFSNNWLFLVITIVASYYTTLLTSQDARTAWQGII--MSVIFPFLFV 400 Query: 533 SFPAGLIIYWSWSNVISI 550 P+GL +Y++ + +I + Sbjct: 401 GLPSGLFLYYATNTLIQL 418 >gi|255547956|ref|XP_002515035.1| conserved hypothetical protein [Ricinus communis] gi|223546086|gb|EEF47589.1| conserved hypothetical protein [Ricinus communis] Length = 499 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 114/232 (49%), Gaps = 22/232 (9%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L TV VK FPL KKQ S M+++QP+I +++++ + ++ Q +LY Sbjct: 135 YGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQQYAGNQEKI-QLETARLY 193 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAA----ADPTNIF 474 K INP AGC P L IPV+ +Y+ +S ++ E + WI LA A N Sbjct: 194 KLAGINPFAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGS 253 Query: 475 TLFGILPFYLPGFMHVGIWPII--------MSLSMFI-----QMKMSPPPADKGQAMILN 521 + + PF + G +G + + +S +I Q + P K I Sbjct: 254 GISWLFPF-VDGHPPLGWYDTFAYLVLPVLLVVSQYISVQIMQSSQNNDPNMKSSQAITQ 312 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE--IGLIDRLR 571 +P++ + S P+GL +YW +N++S QQ + K+ GA+ + D LR Sbjct: 313 LLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVSQEDHLR 364 >gi|256826456|ref|YP_003150416.1| preprotein translocase subunit YidC [Kytococcus sedentarius DSM 20547] gi|256689849|gb|ACV07651.1| preprotein translocase subunit YidC [Kytococcus sedentarius DSM 20547] Length = 350 Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 115/219 (52%), Gaps = 22/219 (10%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK----QSPPQVLQKAMIQ 417 ++I+ + V+LL PL KQ S+ M+ + P++ +++ K+K Q+ Q Q ++ Sbjct: 38 LSILALVILVRLLMIPLVVKQIHSSRKMQLLAPELKKIQAKYKGKKDQASMQRQQAETME 97 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA---PFWGWIKDLAAA-DPTNI 473 LYK + NP A C PIL+QIP+ F +++V++ E+ P +DLA++ D I Sbjct: 98 LYKNNGTNPFASCLPILVQIPILFGLFRVLNGVDEIAAGTKDPIGFMTRDLASSFDAATI 157 Query: 474 FTLFGILPFY----LPGFMHVGIWPIIMSLSMFIQMKM-----SPPPADKG-----QAMI 519 F F L G + + ++M++ F+ MKM P A +G Q ++ Sbjct: 158 FGAELSDSFLHDSDLTGKIVSVVLILLMTVFTFVSMKMMMDKNMPDSAKEGPMAQSQTIM 217 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 L +PV+ +FP G+++YW+++N+ S QQ +++ Sbjct: 218 LYALPVILAVTGVNFPIGVLVYWTFTNLWSYFQQLYVIR 256 >gi|227496609|ref|ZP_03926887.1| inner membrane protein translocase protein [Actinomyces urogenitalis DSM 15434] gi|226833889|gb|EEH66272.1| inner membrane protein translocase protein [Actinomyces urogenitalis DSM 15434] Length = 387 Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 116/233 (49%), Gaps = 33/233 (14%) Query: 353 FYNLVGNFGIAIMLT----TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSP 407 F L G+A +L+ T+FV+LL PL KQ ++ M+ +QP++ L+ K+K ++ Sbjct: 25 FIGLPDGPGVAWVLSIVGLTIFVRLLIMPLFVKQIRASRGMQLMQPELQALQAKYKGKTD 84 Query: 408 P---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---W 461 P Q Q+ M+ LY+ H NP + C PIL+Q+PVFFA+++V++ SL+ + Sbjct: 85 PASRQRQQEEMMALYRKHGTNPFSSCMPILVQMPVFFALFRVLA-SLQAVATGTYANHDS 143 Query: 462 IKDLAA--ADPTNIFTLFG----------------ILPFYLPGFMHVGIWPIIMSLSMF- 502 I L A A+ TLFG ++ + M V W + L+M Sbjct: 144 IGPLTAQLAEDVQASTLFGAHLSESFMNSSDVTTKVVTVIMIIAMSVSQWYTMAQLTMKN 203 Query: 503 --IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 K S P + Q M++ MP+ F F F G+++YW +N+ ++ QQ Sbjct: 204 MPESSKNSDNPMMRSQRMMMTIMPIFFAFTGVQFQIGVLVYWVTTNLWTMGQQ 256 >gi|288574742|ref|ZP_06393099.1| 60 kDa inner membrane insertion protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570483|gb|EFC92040.1| 60 kDa inner membrane insertion protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 259 Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 72/228 (31%), Positives = 121/228 (53%), Gaps = 23/228 (10%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 M+ L+S +N VG++G+A+++ T+ V+LL PL KQ VS M+ +QP+I L+EK+K Sbjct: 9 MYGLLSTIHNFVGSWGLAVIVLTLLVRLLLHPLNHKQLVSMQKMQKLQPRIKMLQEKYKD 68 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV-----------ISISLEMR 454 + L + + LYK + +NP AGC P+L+Q+P+ +++V + I+LE Sbjct: 69 D-KEGLSRETMALYKENKVNPAAGCLPLLVQLPILILLFRVLMNSDFGGASFLGITLEGS 127 Query: 455 HAPFWGWIKDLAAADPTNI--FTLFGILPFYLPGFMHVGIWP---IIMSLSMFI---QMK 506 + AA+ TNI T+ + G G++ +++ L +F+ Q + Sbjct: 128 VLTTMAEALGVVAAEGTNIGFMTVVKAIMANPSGLASFGLYGPNLLLLGLIIFVTWYQQR 187 Query: 507 MSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MS Q ++NW MPV F S P G+++YW S+ I + QQ Sbjct: 188 MS--STGNPQMAMMNWFMPVFMGFICLSLPGGVMLYWGASSFIGVGQQ 233 >gi|256545946|ref|ZP_05473301.1| sporulation associated-membrane protein [Anaerococcus vaginalis ATCC 51170] gi|256398368|gb|EEU11990.1| sporulation associated-membrane protein [Anaerococcus vaginalis ATCC 51170] Length = 252 Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 27/229 (11%) Query: 341 FIAKPMFMLMSYFYN-LVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 FIA+ + LM + Y+ LV NF I+I+L TV V L+ P+ Q A Sbjct: 4 FIAQILGSLMKFIYDSLVNNFTEPSNISFYAISIILMTVLVSLITIPMTMNQQKQAAKSG 63 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-LAGCWPILLQIPVFFAIYKVIS- 448 IQPK++E+++K+ P Q++Q+ M QLYK + P ++ C ++ Q+ + ++Y+VI Sbjct: 64 EIQPKVEEIKKKYAYDP-QIMQQKMQQLYKEEGVGPGISSCLVMIFQLLILLSLYRVIQN 122 Query: 449 -----ISLEMRHAPF-WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 + EM + W+ L+ ADP LF LP L +G+ M S Sbjct: 123 PNKFIFAGEMHQVKDNFLWVPTLSKADP-----LFYGLPL-LTSISQLGVQLFTMKTSPQ 176 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 Q + +P ++ MPV++ F + PAGL +YW+ S++ ++ Sbjct: 177 GQAQNTPGMGSMNNMLL--AMPVIYYFVFRNLPAGLPLYWTTSSLARLL 223 >gi|297193299|ref|ZP_06910697.1| membrane protein oxaA [Streptomyces pristinaespiralis ATCC 25486] gi|197718384|gb|EDY62292.1| membrane protein oxaA [Streptomyces pristinaespiralis ATCC 25486] Length = 432 Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 37/248 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ L G G++I+ + +++ PL KQ ST NM Sbjct: 8 FSFITTPVSWIIVQFHKLYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKSTRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS- 448 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QALQPKMKAIQERYKNDR-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSK 126 Query: 449 -------------ISLEMRHAPFWGW-IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 + R+A +G I DP+ + L L + I Sbjct: 127 IASGNEIGVLNQSLVDSARNAHIFGAPIASKFMDDPSKVEALNASLTDVR---IVTAIMI 183 Query: 495 IIMSLSMF-IQMKMSPPPAD--------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 I+MS S F Q ++ D + Q M++ P++F +FP G+++YW + Sbjct: 184 ILMSASQFYTQRQLMQKNVDLTVKTPYMQQQKMLMYIFPLIFAVMGINFPVGVLVYWLTT 243 Query: 546 NVISIVQQ 553 NV ++ QQ Sbjct: 244 NVWTMGQQ 251 >gi|281412770|ref|YP_003346849.1| membrane protein insertase, YidC/Oxa1 family [Thermotoga naphthophila RKU-10] gi|281373873|gb|ADA67435.1| membrane protein insertase, YidC/Oxa1 family [Thermotoga naphthophila RKU-10] Length = 443 Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 28/212 (13%) Query: 345 PMFMLMSYFY----NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 P+F + +F+ +L NFG AI+L T+ V+L+ +PL Q S NM+ +QP+I+ ++ Sbjct: 227 PVFYGLVWFFWWLKDLTKNFGWAIVLFTLIVRLILYPLYHAQTKSLINMRKLQPQIEAIK 286 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRHAPF 458 +K+K Q Q+A+++LY+ +NP +GC +L+Q+P+F ++ VI +E F Sbjct: 287 KKYKDPTKQ--QEALLKLYREAGVNPASGCLMLLIQLPIFMLLWSVIRYYVEEFAYSGNF 344 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 W KDL+A GF + ++ II ++ + ++ A Sbjct: 345 LIW-KDLSAG-----------------GFSNNWLFLIITIVASYYTTLLTSQDARTAWQG 386 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 I+ M V+F F P+GL +Y++ + +I + Sbjct: 387 II--MSVIFPFLFVGLPSGLFLYYATNTLIQL 416 >gi|148270463|ref|YP_001244923.1| 60 kDa inner membrane insertion protein [Thermotoga petrophila RKU-1] gi|170289142|ref|YP_001739380.1| 60 kDa inner membrane insertion protein [Thermotoga sp. RQ2] gi|147736007|gb|ABQ47347.1| 60 kDa inner membrane insertion protein [Thermotoga petrophila RKU-1] gi|170176645|gb|ACB09697.1| 60 kDa inner membrane insertion protein [Thermotoga sp. RQ2] Length = 443 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 28/212 (13%) Query: 345 PMFMLMSYFY----NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 P+F + +F+ +L NFG AI+L T+ V+L+ +PL Q S NM+ +QP+I+ ++ Sbjct: 227 PVFYGLVWFFWWLKDLTKNFGWAIVLFTLIVRLILYPLYHAQTKSLINMRKLQPQIEAIK 286 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRHAPF 458 +K+K Q Q+A+++LY+ +NP +GC +L+Q+P+F ++ VI +E F Sbjct: 287 KKYKDPTKQ--QEALLKLYREAGVNPASGCLMLLIQLPIFMLLWSVIRYYVEEFAYSGNF 344 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 W KDL+A GF + ++ II ++ + ++ A Sbjct: 345 LIW-KDLSAG-----------------GFSNNWLFLIITIVASYYTTLLTSQDARTAWQG 386 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 I+ M V+F F P+GL +Y++ + +I + Sbjct: 387 II--MSVIFPFLFVGLPSGLFLYYATNTLIQL 416 >gi|269797065|ref|YP_003316520.1| preprotein translocase subunit YidC [Sanguibacter keddieii DSM 10542] gi|269099250|gb|ACZ23686.1| preprotein translocase subunit YidC [Sanguibacter keddieii DSM 10542] Length = 365 Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 70/249 (28%), Positives = 121/249 (48%), Gaps = 33/249 (13%) Query: 334 IDWG--WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV----FVKLLFFPLAKKQYVSTA 387 ++W W F+ +F+ F L G+A +L+ V ++ + PL KQ ++ Sbjct: 8 LEWAVAWIMFLCHKLFV----FIGLPDGAGVAWILSIVGLVIVIRTIMIPLFFKQIRASR 63 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGCWPILLQIPVFFAI 443 M+ +QP++ +++K+K ++AM + LYK H NP A C P+LLQ PVFFA+ Sbjct: 64 GMQMVQPELQAIQKKYKNKKDPASREAMSRETMALYKKHGTNPFASCLPVLLQAPVFFAL 123 Query: 444 YKVISISLEMRHAPFWGWIK-DLAAADPTNIFTLFGI--------LPFYLPGFMHVGIWP 494 ++V++ + G D A A +LFG P L + G+ Sbjct: 124 FRVLNSLRGIADGTKSGIGPIDQAVAQAAETSSLFGAPLSSTFLHEPTDLNTKIVAGVLI 183 Query: 495 IIMSLSMF-----IQMKMSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSW 544 + M+ + F + MK P A +G Q ++L +PV+ + +FP G++IYW+ Sbjct: 184 VSMAATQFLTQRQLTMKNMPKAALEGPMMQTQKIMLYMLPVIMAVSGVNFPVGVLIYWTT 243 Query: 545 SNVISIVQQ 553 +N+ S+ QQ Sbjct: 244 TNLWSMGQQ 252 >gi|291486743|dbj|BAI87818.1| OxaA-like protein precursor [Bacillus subtilis subsp. natto BEST195] Length = 260 Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 117/226 (51%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ L++Y L G N+G++I+L T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 37 WDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLILPLMIKQLRSSKAMQALQPEM 96 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q Q LQ+ + L++ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 97 QKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 156 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 F W DL D P+Y I PI+ ++ F+Q K+ Sbjct: 157 SEHSFL-WF-DLGEKD-----------PYY--------ILPIVAGVATFVQQKLMMAGNA 195 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 196 QQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMIAQTFLI 241 >gi|296330034|ref|ZP_06872518.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676758|ref|YP_003868430.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. spizizenii str. W23] gi|296153073|gb|EFG93938.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305415002|gb|ADM40121.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. spizizenii str. W23] Length = 259 Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 117/226 (51%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ L++Y L G N+G++I+L T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 36 WDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLILPLMIKQLRSSKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q Q LQ+ + L++ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 96 QKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 F W DL D P+Y I PI+ ++ F+Q K+ Sbjct: 156 SEHSFL-WF-DLGEKD-----------PYY--------ILPIVAGVATFVQQKLMMAGNA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 QQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMIAQTFLI 240 >gi|221312087|ref|ZP_03593934.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. 168] gi|221316412|ref|ZP_03598217.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221325608|ref|ZP_03606902.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. SMY] gi|321313665|ref|YP_004205952.1| OxaA-like protein [Bacillus subtilis BSn5] gi|580918|emb|CAA78595.1| SpoIIIJ [Bacillus subtilis subsp. subtilis str. 168] gi|320019939|gb|ADV94925.1| OxaA-like protein precursor [Bacillus subtilis BSn5] Length = 259 Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 117/226 (51%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ L++Y L G N+G++I+L T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 36 WDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLILPLMIKQLRSSKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q Q LQ+ + L++ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 96 QKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 F W DL D P+Y I PI+ ++ F+Q K+ Sbjct: 156 SEHSFL-WF-DLGEKD-----------PYY--------ILPIVAGVATFVQQKLMMAGNA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 QQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMIAQTFLI 240 >gi|269129164|ref|YP_003302534.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata DSM 43183] gi|268314122|gb|ACZ00497.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata DSM 43183] Length = 351 Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 24/214 (11%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I+L TVF++LL FPL KQ ++ M+ + P+I LR+K+K Q L + ++++Y+ + Sbjct: 35 SIILLTVFLRLLMFPLFVKQIHASRKMQELSPQIQALRKKYKHD-KQRLNQEVMRVYQEN 93 Query: 423 NINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPFWGWIKDL-AAADPTNIFTLFGIL 480 NPLAGC P+L+Q+PVF +++V+ IS +G +L +A +IF ++ Sbjct: 94 GANPLAGCLPLLVQMPVFIGLFQVLNGISKAKEGESKYGISPELIHSAQHADIFG--AVI 151 Query: 481 PFYLPGFMHVGIWP---------IIMSLSMFIQMK--------MSPP-PADKGQAMILNW 522 P G W +I S + F M+ M P P Q M++ Sbjct: 152 PDTFLNAWGDGAWDAVAVTAVAVLISSTTTFFTMRASMKRQPVMDPDNPMVAAQKMMVFL 211 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P++ +F L FP G+++YW SN ++ QQ I Sbjct: 212 APLLGLFGL-GFPLGVLLYWMTSNTWTLAQQHYI 244 >gi|16081156|ref|NP_391984.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. 168] gi|7676172|sp|Q01625|OXAA1_BACSU RecName: Full=Membrane protein oxaA 1; AltName: Full=Stage III sporulation protein J; Flags: Precursor gi|40023|emb|CAA44401.1| unnamed protein product [Bacillus subtilis] gi|467388|dbj|BAA05234.1| stage III sporulation [Bacillus subtilis] gi|2636651|emb|CAB16141.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. subtilis str. 168] Length = 261 Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 117/226 (51%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ L++Y L G N+G++I+L T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 38 WDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLILPLMIKQLRSSKAMQALQPEM 97 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q Q LQ+ + L++ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 98 QKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 157 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 F W DL D P+Y I PI+ ++ F+Q K+ Sbjct: 158 SEHSFL-WF-DLGEKD-----------PYY--------ILPIVAGVATFVQQKLMMAGNA 196 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 197 QQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMIAQTFLI 242 >gi|332882339|ref|ZP_08449967.1| membrane protein insertase, YidC/Oxa1 family domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679723|gb|EGJ52692.1| membrane protein insertase, YidC/Oxa1 family domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 629 Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 89/336 (26%), Positives = 158/336 (47%), Gaps = 57/336 (16%) Query: 251 WLGISDKYWASVFIPSKE--------TSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 W+ +++++ V I ++ T YL D A + F + GK+ Sbjct: 253 WVAFKNQFFSCVLIAHQDFTEAHLSSTPQQKASGYLKDYEADMKTFFDPS------GKTP 306 Query: 303 TTTNFLFAGAKEFPTIHHY------EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY-- 354 T LFA + + H +KDL + E L+ GW P+F ++ F+ Sbjct: 307 TQMQMLFA-PNNYHLLQHTNKLSASDKDLEL---EDLVYLGW------PLFKWINRFFII 356 Query: 355 -------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQS 406 +L + GI ++L T+ VK+L +P +K Y+S+A M+ ++PKIDEL K+ K Sbjct: 357 YIFDWLSSLGLSMGIVLLLLTILVKVLVYPTTRKSYLSSAKMRVLKPKIDELNAKYPKPE 416 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q+ +QLY + ++P+ GC P+LLQ+P++ A++ + ++E+R F W DL+ Sbjct: 417 DAMKKQQETMQLYSQYGVSPMGGCLPMLLQMPIWIALFNFVPNAIELRGESFL-WASDLS 475 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS----MFIQMKMSPPPADKGQAMILNW 522 A D + +L G H+ I+ ++ L+ +I M+ QA + + Sbjct: 476 AYDDVIRWD----KSIWLIG-DHLSIFCLLFCLTNIVNTWISMRQQQNSMTGEQAQQMKF 530 Query: 523 -------MPVVFVFALSSFPAGLIIYWSWSNVISIV 551 MPV F F +++ +GL Y+ S + SI+ Sbjct: 531 MQYMMYIMPVAFFFMFNNYSSGLNYYYFLSGLTSIL 566 >gi|258512905|ref|YP_003186339.1| membrane protein insertase, YidC/Oxa1 family [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479631|gb|ACV59950.1| membrane protein insertase, YidC/Oxa1 family [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 344 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 22/205 (10%) Query: 349 LMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 LM YF +L GN +GI+I+ + V+L+ PL +Q M +QP+I ++R K+K Sbjct: 51 LMDYFAHLFGNDYGISILFMAILVRLVVLPLFLRQIRFQRAMVKLQPEIQKIRTKYKFDN 110 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q +Q+ +++LY+ +NPLAGC+P+L+Q P +A Y I ++ MR + F G Sbjct: 111 -QKMQEELMKLYQEAGMNPLAGCFPMLIQFPFLWAFYGAIVGNIGMRQSTFLG------- 162 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 IF L Y + P++ +LS + +S Q +L PV+ Sbjct: 163 -----IFPLGHWDTHY--------VLPVLAALSTLLSSWLSMQSQPVQQKSMLFVYPVMI 209 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQ 552 F P GL++YW ++N++ +Q Sbjct: 210 FFFTFRLPGGLVLYWIYTNLLVALQ 234 >gi|302870728|ref|YP_003839365.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora aurantiaca ATCC 27029] gi|315506965|ref|YP_004085852.1| membrane protein insertase, yidc/oxa1 family [Micromonospora sp. L5] gi|302573587|gb|ADL49789.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora aurantiaca ATCC 27029] gi|315413584|gb|ADU11701.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora sp. L5] Length = 333 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 24/220 (10%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ V V+++ FP+ KQ S M+ +QPK+ EL+EK K + LQK M++LY+ Sbjct: 41 LAIVFLVVTVRVILFPVFVKQIKSQRAMQALQPKVKELQEKHKGDR-ETLQKEMMELYRK 99 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPFWGWIKD-LAAADPTNIFTL--- 476 NPL GC P+ LQIPVF ++ + +S + + +GW D +A +FT Sbjct: 100 EKANPLMGCLPMFLQIPVFLGLFHTLRRLSPDNQGKTLYGWTVDQFNSASNATLFTAPIS 159 Query: 477 --FGILPFYLP------GFMHV--GIWPIIM-------SLSMFIQMKMSPPPADKG-QAM 518 FG L G + V GI IIM S M ++ + P + Q + Sbjct: 160 GKFGSTADELSRLGASTGTVKVVAGILVIIMIATTYLTSRQMILKTGWAEDPQQRMVQRL 219 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +L +P+ + + + FP G+IIYW +N+ ++ QQ +++ Sbjct: 220 MLYGIPLSLLISGAIFPIGVIIYWVTNNLFTLGQQQWVLR 259 >gi|154249719|ref|YP_001410544.1| 60 kDa inner membrane insertion protein [Fervidobacterium nodosum Rt17-B1] gi|154153655|gb|ABS60887.1| 60 kDa inner membrane insertion protein [Fervidobacterium nodosum Rt17-B1] Length = 448 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W+ FIA + ++ NFG+ I++ T+ V+L+ +P Q M+ +QP ++ Sbjct: 228 WYSFIADGLTEFFNWINTFTRNFGLTIIVFTIIVRLILYPFYHAQTKQMIQMRKLQPAVE 287 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM--RH 455 +++K+K PQ Q+ +++LYK + INP +GC +L+Q+P+F +Y VI E+ Sbjct: 288 AIKKKYKD--PQKQQEELMKLYKENKINPSSGCLMLLIQLPIFMLLYGVIQSYQELFSVS 345 Query: 456 APFWGWIKDLAAA--DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 F W KDL+A +F + IL Y ++ + S Sbjct: 346 GGFLIW-KDLSAGGWGANWLFLIITILTSY------------------YLALITSQDSRT 386 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 Q +I M +F F + P+G+ +YW+ +++I +V I K + Sbjct: 387 AWQQII---MGAIFPFFFINLPSGIFLYWTMNSIIQLVITFYIYKRY 430 >gi|86743220|ref|YP_483620.1| 60 kDa inner membrane insertion protein [Frankia sp. CcI3] gi|86570082|gb|ABD13891.1| 60 kDa inner membrane insertion protein [Frankia sp. CcI3] Length = 462 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 78/250 (31%), Positives = 121/250 (48%), Gaps = 36/250 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +F+ P+F S+F ++ +++L V V++L FPL KQ S M+ +QP+I Sbjct: 15 FFHRGFAPIFGADSFF-----SWAFSVVLLVVCVRILIFPLFVKQVKSQRTMQMMQPRIK 69 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+REK P+ +Q+ M+ L + H NPL GC PI LQIP+F +++ V + M P Sbjct: 70 EIREKHGHDKPR-MQQEMMALQREHG-NPLLGCLPIFLQIPLFISLFHVFTHLAPMNEGP 127 Query: 458 ----FW--------GWIKDLAAADPTNI-----FTLFGILPFYLP-GFMHVGIWPII--- 496 W ++ +A+A I FT G +L HV I I+ Sbjct: 128 NHSLVWRPRVGLSADQVEQIASAKVFGISLASKFTSDGDFSHFLGVDSTHVRILAIVLIV 187 Query: 497 -MSLSMFI---QMKMSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 M L+ F+ Q+ P D QAM+ L P++ F FP +++YW +N+ Sbjct: 188 LMGLTTFLTQRQIMARTGPLDPQQAMVQKALLYGSPLMLAFFGFRFPIAVLLYWLTTNLW 247 Query: 549 SIVQQAVIMK 558 S+ QQ IMK Sbjct: 248 SMGQQFFIMK 257 >gi|239942675|ref|ZP_04694612.1| putative inner membrane protein translocase component YidC [Streptomyces roseosporus NRRL 15998] gi|239989134|ref|ZP_04709798.1| putative inner membrane protein translocase component YidC [Streptomyces roseosporus NRRL 11379] gi|291446136|ref|ZP_06585526.1| membrane protein oxaA [Streptomyces roseosporus NRRL 15998] gi|291349083|gb|EFE75987.1| membrane protein oxaA [Streptomyces roseosporus NRRL 15998] Length = 421 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 35/247 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G G++I+ V +++ PL KQ ST NM Sbjct: 8 FSFITTPVSWIIVQFHKVYGALFGDDSGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS- 448 + +QPK+ ++E++K + Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QVLQPKMKAIQERYK-NDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSS 126 Query: 449 ---------ISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 I+ ++ R A +G LAA ++ + + + I + Sbjct: 127 IASGKKIGAINQDLLDSARQAHIFG--APLAAKFTDSVEKVTSLDASLTDVRIVTAIMIV 184 Query: 496 IMSLSMFIQMKM---------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 +MS S F + P + Q M++ PV+F +FP G+++YW +N Sbjct: 185 LMSASQFFTQRQLMTKNVDLTVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTN 244 Query: 547 VISIVQQ 553 V ++ QQ Sbjct: 245 VWTMGQQ 251 >gi|182437489|ref|YP_001825208.1| putative inner membrane protein translocase component YidC [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466005|dbj|BAG20525.1| putative membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 419 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 35/247 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G G++I+ V +++ PL KQ ST NM Sbjct: 8 FSFITTPVSWVIVQFHKVYGALFGDDSGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS- 448 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QVLQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSS 126 Query: 449 ---------ISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 I+ ++ R A +G LAA ++ + + + I + Sbjct: 127 IASGKKIGAINQDLLDSARQAHIFG--APLAAKFTDSVEKVTSLDASLTDVRIVTAIMIV 184 Query: 496 IMSLSMFIQMKM---------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 +MS S F + P + Q M++ PV+F +FP G+++YW +N Sbjct: 185 LMSASQFFTQRQLMTKNVDLTVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTN 244 Query: 547 VISIVQQ 553 V ++ QQ Sbjct: 245 VWTMGQQ 251 >gi|326778144|ref|ZP_08237409.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf. griseus XylebKG-1] gi|326658477|gb|EGE43323.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf. griseus XylebKG-1] Length = 419 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 35/247 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G G++I+ V +++ PL KQ ST NM Sbjct: 8 FSFITTPVSWVIVQFHKVYGALFGDDSGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS- 448 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QVLQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSS 126 Query: 449 ---------ISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 I+ ++ R A +G LAA ++ + + + I + Sbjct: 127 IASGKKIGAINQDLLDSARQAHIFG--APLAAKFTDSVEKVTSLDASLTDVRIVTAIMIV 184 Query: 496 IMSLSMFIQMKM---------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 +MS S F + P + Q M++ PV+F +FP G+++YW +N Sbjct: 185 LMSASQFFTQRQLMTKNVDLTVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTN 244 Query: 547 VISIVQQ 553 V ++ QQ Sbjct: 245 VWTMGQQ 251 >gi|237743156|ref|ZP_04573637.1| inner membrane protein oxaA [Fusobacterium sp. 7_1] gi|256027563|ref|ZP_05441397.1| inner membrane protein [Fusobacterium sp. D11] gi|260495364|ref|ZP_05815491.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_33] gi|289765522|ref|ZP_06524900.1| inner membrane protein [Fusobacterium sp. D11] gi|229433452|gb|EEO43664.1| inner membrane protein oxaA [Fusobacterium sp. 7_1] gi|260197142|gb|EEW94662.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_33] gi|289717077|gb|EFD81089.1| inner membrane protein [Fusobacterium sp. D11] Length = 201 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 112/202 (55%), Gaps = 22/202 (10%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGNFGI+I++ T+ +K+L PL KQ S MK +QP+++++++K+ Q+L + Sbjct: 19 VGNFGISIIIVTIIIKILLLPLTLKQDKSMKEMKKLQPELEKIKQKYAND-KQMLNIKTM 77 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY+ H +NPL GC PIL+Q+P+ +A++ V+ + + + F W++ ADP Sbjct: 78 ELYREHKVNPLGGCLPILIQLPILWALFGVLRSGIIPKDSSFL-WMR---LADPD----- 128 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 PFY I P++ F+Q K+ + ++ P++ + P+ Sbjct: 129 ----PFY--------ILPVLNGAVSFLQQKLMGTSDNAQMKNMMYVFPIMMIVISYKMPS 176 Query: 537 GLIIYWSWSNVISIVQQAVIMK 558 GL IYW S++I+++QQ IMK Sbjct: 177 GLQIYWLTSSLIAVIQQYFIMK 198 >gi|157363658|ref|YP_001470425.1| 60 kDa inner membrane insertion protein [Thermotoga lettingae TMO] gi|157314262|gb|ABV33361.1| 60 kDa inner membrane insertion protein [Thermotoga lettingae TMO] Length = 443 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W+ + P+ + + + NFG AI++ TV V+ + +PL Q S M+ +QP+I+ Sbjct: 224 WYDPVFYPLVWFFWWLFEMTRNFGWAIIIFTVIVRFVLYPLYHAQTKSMIKMRKVQPRIE 283 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRH 455 +R+K+K Q Q+ ++++Y+ INP GC +L+Q+PVFF +Y VI E Sbjct: 284 AIRKKYKDPTKQ--QEELMKVYREEGINPAGGCLMLLIQLPVFFLLYAVIRYFQEEFAFG 341 Query: 456 APFWGWIKDLAAA--DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W DL+ P IF + ++ Y F + S Sbjct: 342 SKFLLW-NDLSVGGFGPNAIFIIATVVASY------------------FNTLITSQDSRS 382 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 Q ++ M ++F F S P+GL +Y++ + VI +V I K + Sbjct: 383 AWQGIL---MSLIFPFLFVSLPSGLFLYYTVNTVIQLVITYYIYKRY 426 >gi|295394850|ref|ZP_06805063.1| membrane protein OxaA [Brevibacterium mcbrellneri ATCC 49030] gi|294972183|gb|EFG48045.1| membrane protein OxaA [Brevibacterium mcbrellneri ATCC 49030] Length = 319 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 116/218 (53%), Gaps = 23/218 (10%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ----L 418 AI T+ V+ + PL Q + M+ +QP++ EL++K+K Q ++ M + L Sbjct: 42 AIAGLTIVVRAVLIPLFVYQIKAQRKMQLLQPEMMELQKKYKGKRDQFSRQQMAEEQQAL 101 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA---PFWGWIKDLAA-ADPTNIF 474 +K H NP A C P+L+Q+P+FF++++VI + + + P G ++LA+ A +IF Sbjct: 102 FKKHGTNPFASCLPLLVQMPIFFSLFRVIRNTEGIGNGDIPPIGGLTQELASQATHASIF 161 Query: 475 TLFGILPFYLPGFMHV----GIWPIIMSLSMFIQMK------MSPP----PADKGQAMIL 520 + + +L G + I +IM ++ FI + MS P + Q M+L Sbjct: 162 GV-ELSDTFLQGDLGTKVLTAILIVIMGVTQFITQRQIMAKNMSEAAMNNPFMQQQKMLL 220 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MP++F FP GLI+YW SNV ++VQQ ++++ Sbjct: 221 YMMPIIFAVGGIYFPLGLIVYWLVSNVWTMVQQFIVIR 258 >gi|225016764|ref|ZP_03705956.1| hypothetical protein CLOSTMETH_00676 [Clostridium methylpentosum DSM 5476] gi|224950432|gb|EEG31641.1| hypothetical protein CLOSTMETH_00676 [Clostridium methylpentosum DSM 5476] Length = 348 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 44/265 (16%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + P+ ++ Y +V N+G+AI++ T+ +K+ P+A KQ S+A M QP+I E Sbjct: 7 YELFGTPLGYVIWAIYQVVKNYGVAIIIFTIILKVAMLPIAIKQQKSSAKMGAFQPRIAE 66 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI----------S 448 + +K+ ++ PQ Q+ + +LY+ +P+ GC P+L+Q + F I V+ S Sbjct: 67 INKKYAKN-PQKKQEELTKLYEEEGYSPMKGCLPMLIQFVILFGIIDVVYKPLTHILHLS 125 Query: 449 ISLEMRHAPFWGW----------IKDLAAADPTNIFTL-------------------FGI 479 + + A G I D DP+ L G Sbjct: 126 KDVIAKAAEIIGGNAGAMNQQLKIVDAIQQDPSKFSELGQNVIDKVNSLDLNFLGLNLGS 185 Query: 480 LPFYLPGFMHVGIWPIIMS-LSMFIQMKMSP---PPADKGQAMILNWMPVVFVFALSSFP 535 +P + + + I I S L MF+ MKM+P P M++ MP+ V+ S P Sbjct: 186 VPNWTSILIIIPILAGIFSFLQMFVSMKMNPMGETPGAGSMKMMMFVMPIFSVWITFSVP 245 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 G+ IYW + V+ I Q ++ K++ Sbjct: 246 VGVGIYWILTYVVGIGQVLLLNKLY 270 >gi|212697392|ref|ZP_03305520.1| hypothetical protein ANHYDRO_01962 [Anaerococcus hydrogenalis DSM 7454] gi|212675584|gb|EEB35191.1| hypothetical protein ANHYDRO_01962 [Anaerococcus hydrogenalis DSM 7454] Length = 252 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 75/262 (28%), Positives = 125/262 (47%), Gaps = 38/262 (14%) Query: 341 FIAKPMFMLMSYFYN-LVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 FIA+ + LM Y+ LV NF I+I+L TV V L+ P+ Q A Sbjct: 4 FIAQLLGSLMKLIYDSLVNNFTEPSNMSFYAISIILMTVLVSLITIPMTMNQQKQAAKSG 63 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-LAGCWPILLQIPVFFAIYKVISI 449 IQPKI+E+++K+ PQ++Q+ M QLYK + P L+ C ++ Q+ + ++Y+VI Sbjct: 64 EIQPKIEEIKKKYAYD-PQIMQQKMQQLYKEEGVGPGLSSCLVMIFQLLILLSLYRVIQS 122 Query: 450 --------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 S+ F W+ L+ ADP LF LP L + + M S Sbjct: 123 PDKYIFQGSMHQVKDNFL-WVPTLSKADP-----LFYGLPL-LTSISQLAVQVFTMKTSP 175 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 Q + +P +++ MP+++ F + PAGL +YW+ S++ ++ + G Sbjct: 176 QSQAQNTPGMGSMNNMLMI--MPIIYYFVFRNLPAGLPLYWTTSSLARLI-------ILG 226 Query: 562 AE--IGLIDRLRSTFSKNYNSQ 581 + IGL R + ++ NS+ Sbjct: 227 GQYLIGLSKRDKEEENEKINSK 248 >gi|325846396|ref|ZP_08169365.1| membrane protein insertase, YidC/Oxa1 family [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481580|gb|EGC84620.1| membrane protein insertase, YidC/Oxa1 family [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 252 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 29/230 (12%) Query: 341 FIAKPMFMLMSYFYN-LVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 FIA+ + LM Y+ LV NF I+I+L TV V L+ P+ Q A Sbjct: 4 FIAQLLGSLMKLIYDSLVNNFTEPSNMSFYAISIILMTVLVSLITIPMTMNQQKQAAKSG 63 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-LAGCWPILLQIPVFFAIYKVISI 449 IQPKI+E+++K+ PQ++Q+ M QLYK + P L+ C ++ Q+ + ++Y+VI Sbjct: 64 EIQPKIEEIKKKYAYD-PQIMQQKMQQLYKEEGVGPGLSSCLVMIFQLLILLSLYRVIQS 122 Query: 450 --------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 S+ F W+ L+ ADP LF LP L + + M S Sbjct: 123 PDKYIFQGSMHQVKDNFL-WVPTLSKADP-----LFYGLPL-LTSISQLAVQVFTMKTSP 175 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 Q + +P +++ MP+++ F + PAGL +YW+ S++ ++ Sbjct: 176 QSQAQNTPGMGSMNNMLMI--MPIIYYFVFRNLPAGLPLYWTTSSLARLI 223 >gi|169830199|ref|YP_001700357.1| membrane protein oxaA 1 [Lysinibacillus sphaericus C3-41] gi|168994687|gb|ACA42227.1| Membrane protein oxaA 1 precursor [Lysinibacillus sphaericus C3-41] Length = 256 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 27/226 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W FI P+ + YF +L+G + I+ T+ ++L PL KQ S+ M+ IQPK+ Sbjct: 36 WNEFIVWPLVSAIKYFADLLGTYAWGIIAVTIIIRLAILPLMIKQTKSSKKMQEIQPKLK 95 Query: 398 ELREKFKQSPPQVLQKA---MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 EL++K+ Q Q+ M++L +NPLAGC P+++Q+P+ Y IS Sbjct: 96 ELQKKYASKDAQTQQQYQQEMMKLMSESGVNPLAGCLPVIIQMPILIGFYHAIS------ 149 Query: 455 HAPFWGWIKDLAAADPTNIFTL--FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + T+ F L F I P P I L FI ++ P Sbjct: 150 ------------RMNATSTFDLGNFFIFPLADPA----PALAITAGLMQFIVLRTGPAMD 193 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +++ MP + + + PA L +YW N+ISI Q I K Sbjct: 194 NPQMKIMMYIMPFMIIAFGMALPAALSLYWVIGNIISIFQNLYIYK 239 >gi|255028899|ref|ZP_05300850.1| SpoIIIJ protein [Listeria monocytogenes LO28] Length = 160 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 74/119 (62%), Gaps = 4/119 (3%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE 160 >gi|238061909|ref|ZP_04606618.1| inner membrane insertion protein [Micromonospora sp. ATCC 39149] gi|237883720|gb|EEP72548.1| inner membrane insertion protein [Micromonospora sp. ATCC 39149] Length = 327 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 111/228 (48%), Gaps = 36/228 (15%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ V V+++ FP+ KQ S M+ +QP++ EL+EK K + LQK M++LY+ Sbjct: 41 LAIVFLVVTVRVILFPVFVKQIKSQRAMQALQPRVKELQEKHKGDR-ETLQKEMMELYRK 99 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI----------------------SISLEMRHAPFW 459 NPL GC P+ LQIPVF ++ V+ + S ++ AP Sbjct: 100 EKANPLMGCLPMFLQIPVFLGLFHVLRRLDPAKVNKTLYGWTVEQFDSASSAKLFTAPIA 159 Query: 460 GWIKDLA------AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 G A A+ T + + GIL + G + + S M ++ + P Sbjct: 160 GKFGSTADELARLGANGTTVKVIAGILVLVMMGTTY------LTSRQMILKTGWAEDPQQ 213 Query: 514 KG-QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 K Q ++L +P+ + + + FP G+IIYW +N+ ++ QQ +++ + Sbjct: 214 KMIQRLMLYGIPLSLLVSGAIFPIGVIIYWVTNNLFTLGQQQWVLRKY 261 >gi|295425822|ref|ZP_06818503.1| ParB/SpoJ family partitioning protein [Lactobacillus amylolyticus DSM 11664] gi|295064515|gb|EFG55442.1| ParB/SpoJ family partitioning protein [Lactobacillus amylolyticus DSM 11664] Length = 296 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 21/198 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 N+G+ I++ T+ V+++ PL S+ M+ IQP++D LR+K+ Q+L + Sbjct: 77 NYGVTIIVFTILVRIILLPLNAISIRSSTKMQQIQPQVDALRKKYPGRDTESRQLLSQET 136 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +LYK +NP GC P+L+Q+PV +A+Y I + ++++ F W+ DL DP I Sbjct: 137 NKLYKEAGVNPYTGCLPLLIQLPVMYALYMAILRTPQLQNGHFL-WM-DLGKPDPYYIMP 194 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS-SF 534 + + + LS +I +P A G + + + V A++ F Sbjct: 195 ILAM---------------VFTFLSTYISQISTPKSAQNGMTKFMTYGMSIMVGAVAIGF 239 Query: 535 PAGLIIYWSWSNVISIVQ 552 + + +YW SN+ VQ Sbjct: 240 QSAITLYWVISNLFQAVQ 257 >gi|259047909|ref|ZP_05738310.1| stage III sporulation protein J [Granulicatella adiacens ATCC 49175] gi|259035443|gb|EEW36698.1| stage III sporulation protein J [Granulicatella adiacens ATCC 49175] Length = 270 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 26/204 (12%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---QSPPQVLQKA 414 G++G+ I+ T+ +L+ PL QY ST +QP+I LREK+ ++ ++LQ Sbjct: 55 GSYGLGIIFFTIITRLIMVPLMHFQYQSTRKQAILQPEIKALREKYSARDRATQEMLQAE 114 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M LY+ IN AGC P+L+Q+PV A+Y+ IS + ++ F W + L DP I Sbjct: 115 MNALYEREGINQYAGCLPLLIQLPVMMALYQAISRTEVLKTGHFL-WFQ-LDQPDPYFIL 172 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--MILNWMPVVFVFALS 532 P++ +++ FI +S D G A ++ +MPV+ +F Sbjct: 173 -------------------PVLAAVTTFITTWLSMKMQDTGGAGKAMMYFMPVMILFMSL 213 Query: 533 SFPAGLIIYWSWSNVISIVQQAVI 556 + L +YW NV + Q ++ Sbjct: 214 GLASALSLYWVVGNVFMVGQTLLL 237 >gi|32307520|gb|AAP79165.1| plastid membrane protein albino 3 [Bigelowiella natans] Length = 440 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 117/230 (50%), Gaps = 21/230 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +G F + + MS VG + G++I+L TVFVKLL FPL ++Q T M I Sbjct: 126 FGQFVKLIAGTILFMSNSLQKVGVEQSIGLSIVLFTVFVKLLTFPLNEQQIKGTERMGII 185 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--IS 450 QPKI E++ K+K P + +K + +Y + +NPLAG P QIP+F A+Y+ + + Sbjct: 186 QPKIKEIQAKYKDDPNKSAEK-LQSVYAENQVNPLAGLLPAFAQIPIFIALYRALQNLAT 244 Query: 451 LEMRHAPFWGWIKDLAAAD----PTN-IFTLF-GILPFYLPGFMHVGIW---PIIMSLSM 501 + PF W+ +L TN +FT F +P Y G+ + PI + S Sbjct: 245 DGQMNQPFL-WLPNLEGPTFGPIGTNWLFTGFHDGVPQY--GWHDTAAYLSLPIFLIFSQ 301 Query: 502 FIQMKM--SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 + ++ S D Q ++P++F + + P+GL +YW +N+++ Sbjct: 302 IVSQRLLVSKEQYD-AQPQWTKFLPIIFGYFSLNVPSGLAVYWVANNIVT 350 >gi|58338216|ref|YP_194801.1| stage III sporulation protein J [Lactobacillus acidophilus NCFM] gi|58255533|gb|AAV43770.1| stage III sporulation protein J [Lactobacillus acidophilus NCFM] Length = 291 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 111/220 (50%), Gaps = 22/220 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ T+ V+++ PL ST M++IQP+I Sbjct: 49 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIVRVILLPLNAISIRSTTKMQSIQPQI 108 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+++Q+PV +A+Y I + ++ Sbjct: 109 NELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVIIQLPVMYALYGAILRTPQL 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W+ DL+ DP I + + + LS +I +P + Sbjct: 169 QTGRFL-WM-DLSKPDPYYIMPILAM---------------VFTFLSTYISQLSTPKSSQ 211 Query: 514 KGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQ 552 G ++ + + V ++ +F + + +YW SN+ VQ Sbjct: 212 NGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQAVQ 251 >gi|299541768|ref|ZP_07052091.1| membrane protein oxaA 1 precursor [Lysinibacillus fusiformis ZC1] gi|298725506|gb|EFI66147.1| membrane protein oxaA 1 precursor [Lysinibacillus fusiformis ZC1] Length = 256 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 27/226 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W FI P+ + YF +L+G + I+ T+ ++L PL KQ S+ M+ IQPK+ Sbjct: 36 WNEFIVWPLVSAIKYFADLLGTYAWGIIAVTIIIRLAILPLMIKQTKSSKKMQEIQPKLK 95 Query: 398 ELREKFKQSPPQVLQKA---MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 EL++K+ Q Q+ M++L +NPLAGC P+++Q+P+ Y IS Sbjct: 96 ELQKKYASKDAQTQQQYQQEMMKLMSESGVNPLAGCLPVIIQMPILIGFYHAIS------ 149 Query: 455 HAPFWGWIKDLAAADPTNIFTL--FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + T+ F L F I P P I L FI ++ P Sbjct: 150 ------------RMNATSTFDLGNFFIFPLADPAPALA----ITAGLMQFIVLRTGPAMD 193 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +++ MP + + + PA L +YW N+ISI Q I K Sbjct: 194 NPQMKIMMYIMPFMIIGFGMALPAALSLYWVIGNIISIFQNLYIYK 239 >gi|227902597|ref|ZP_04020402.1| stage III sporulation protein J [Lactobacillus acidophilus ATCC 4796] gi|227869686|gb|EEJ77107.1| stage III sporulation protein J [Lactobacillus acidophilus ATCC 4796] Length = 298 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 111/220 (50%), Gaps = 22/220 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ T+ V+++ PL ST M++IQP+I Sbjct: 56 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIVRVILLPLNAISIRSTTKMQSIQPQI 115 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+++Q+PV +A+Y I + ++ Sbjct: 116 NELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVIIQLPVMYALYGAILRTPQL 175 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W+ DL+ DP I + + + LS +I +P + Sbjct: 176 QTGRFL-WM-DLSKPDPYYIMPILAM---------------VFTFLSTYISQLSTPKSSQ 218 Query: 514 KGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQ 552 G ++ + + V ++ +F + + +YW SN+ VQ Sbjct: 219 NGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQAVQ 258 >gi|315608951|ref|ZP_07883923.1| inner membrane protein OxaA [Prevotella buccae ATCC 33574] gi|315249331|gb|EFU29348.1| inner membrane protein OxaA [Prevotella buccae ATCC 33574] Length = 632 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 126/554 (22%), Positives = 247/554 (44%), Gaps = 76/554 (13%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGY--H----LDVSSNSPIVTLLSPSNTKNAYF-- 121 RV LKN + ++N KGA + ++ Y H D S + VTL + + Sbjct: 84 RVVLKNNKVELTLNSKGATVERAVVKNYVGHDINVKDGSKDRKDVTLFEGKDQSLKFMLA 143 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLF 180 A+ ++TA+ P++ T + + L + + L +S++ LF Sbjct: 144 AKEANINTADLYFTPSAQTDSTVTFTASAGAGRSLSLKYTLGRDYLLHMQLSVEGMGGLF 203 Query: 181 K-IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + T+ N D+++ RG ++ AT T+ G L + S +K + K Sbjct: 204 APDMKTLDINWQDRVKQQERGFTFENR--YATLTYHETAGGTDYLSETS---EKVDEPCK 258 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKE-------TSFHSQ--FKYLSDGHARYQAKFS 290 SI W+ ++++++V I + TS + YL AR + F Sbjct: 259 ESID-------WVAFKNQFFSAVMIVKDDFQKNALLTSIPQEKGSGYLKQYQARLKTAFD 311 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWFYFIAKPMF 347 N G+ + F F G +F + E + + E L+ GW P+F Sbjct: 312 PN------GRQPSEFEFYF-GPNDFRLLQKVEHESRFGKSLEMERLVYLGW------PLF 358 Query: 348 MLMS-----YFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 ++ Y ++ + N+ GI ++L T+ +K+L +P+ KK Y+S+A M+ ++PK++E Sbjct: 359 RWINRFFTIYVFDFLRNYFPMGIVLILITLLLKVLTYPMVKKSYMSSAKMRVLKPKLEEA 418 Query: 400 REKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +++ + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + ++++R F Sbjct: 419 TKQYDKPEDQMQKQQAMMAEYSKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGQSF 478 Query: 459 WGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W+KDL+ DP N++ + L F + ++ S Q + Sbjct: 479 L-WMKDLSTFDPLFEWNHNLWLIGDHLSLTCILFC---VAQVLYSWMTMRQQRDQMVGQQ 534 Query: 514 KGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM---KMHGAEIGL 566 Q ++ W MP++F F + + +GL Y+ +S+ A IM + + L Sbjct: 535 AEQMKMMQWMMYLMPLMFFFMFNDYSSGLNFYY----FVSLFFSAAIMWTLRKTTNDKKL 590 Query: 567 IDRLRSTFSKNYNS 580 ++ L + + +N N+ Sbjct: 591 LEILEARYRENKNN 604 >gi|227878344|ref|ZP_03996301.1| stage III sporulation protein J [Lactobacillus crispatus JV-V01] gi|227862080|gb|EEJ69642.1| stage III sporulation protein J [Lactobacillus crispatus JV-V01] Length = 296 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 22/220 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ TV V+++ PL ST M++IQP+I Sbjct: 54 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTVIVRVILVPLNAISIRSTTKMQSIQPQI 113 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+L+Q+PV +A+Y I + ++ Sbjct: 114 NELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLPVMYALYGAILRTPQL 173 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W+ DL+ DP I + + I LS +I +P + Sbjct: 174 QTGRFL-WM-DLSKPDPYYIMPILAM---------------IFTFLSTYISQLSTPKSSQ 216 Query: 514 KGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQ 552 G ++ + + V ++ +F + + +YW SN+ +Q Sbjct: 217 NGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQALQ 256 >gi|222100006|ref|YP_002534574.1| Inner membrane protein oxaA [Thermotoga neapolitana DSM 4359] gi|221572396|gb|ACM23208.1| Inner membrane protein oxaA [Thermotoga neapolitana DSM 4359] Length = 445 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 26/199 (13%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +L +FG AI+L T+ V+L+ +PL Q S NM+ +QP+I+ +++K+K Q Q+A Sbjct: 243 DLTKSFGWAIVLFTLIVRLILYPLYHAQTKSLINMRKLQPQIEAIKKKYKDPAKQ--QEA 300 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRHAPFWGWIKDLAAADPTN 472 +++LYK +NP +GC +L+Q+P+F ++ VI +E F W KDL+A Sbjct: 301 LLKLYKEAGVNPASGCLMLLIQLPIFILLWSVIRYYVEEFAYSGGFLIW-KDLSAG---- 355 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMILNWMPVVFVFAL 531 GF + I+ +I +S + ++ Q +I M ++F F Sbjct: 356 -------------GFANNWIFLVITIVSSYYTTLLTSQDVRTAWQGLI---MSIIFPFLF 399 Query: 532 SSFPAGLIIYWSWSNVISI 550 P+GL +Y++ + +I + Sbjct: 400 VGLPSGLFLYYTTNTLIQL 418 >gi|221321325|ref|ZP_03602619.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. JH642] Length = 259 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 117/226 (51%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ L++Y L G N+G++I+L T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 36 WDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLILPLMIKQLRSSKAMQALQPEM 95 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q Q LQ+ + L++ H +NPLAGC+PIL+++P+ Y I + + Sbjct: 96 QKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPILIKMPILIGFYHAIMRTQAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPP 510 F W DL D P+Y I PI+ ++ F+Q K+ Sbjct: 156 SEHSFL-WF-DLGEKD-----------PYY--------ILPIVAGVATFVQQKLMMAGNA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 QQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMIAQTFLI 240 >gi|318058974|ref|ZP_07977697.1| putative inner membrane protein translocase component YidC [Streptomyces sp. SA3_actG] gi|318077328|ref|ZP_07984660.1| putative inner membrane protein translocase component YidC [Streptomyces sp. SA3_actF] Length = 447 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 36/254 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 WF FI P+ ++ F+ L G +G++I+ + +++ PL KQ +T Sbjct: 7 WFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKATRA 66 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP++ ++E++K S Q + M++LYK NPL+ C PIL+Q P FFA+Y V+ Sbjct: 67 MQTLQPEMKRIQERYK-SDKQRQSEEMMKLYKESGTNPLSSCLPILVQSPFFFALYHVLD 125 Query: 449 ISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFYLPGFMHVG-----------IWPI 495 + G I D L +A +IF + + G +G + Sbjct: 126 GIASNKKI---GVINDKLLDSAQQAHIFGAP-LAAKFTSGADSLGADLTTVRIVTACMIV 181 Query: 496 IMSLSMFIQMKM---------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 +MS S F + P + Q M++ PV+F +FP G+++YW +N Sbjct: 182 MMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLLYWLTTN 241 Query: 547 VISIVQQAVIMKMH 560 V ++ QQ +++ + Sbjct: 242 VWTMGQQMFVIRQN 255 >gi|295837761|ref|ZP_06824694.1| membrane protein OxaA [Streptomyces sp. SPB74] gi|197698917|gb|EDY45850.1| membrane protein OxaA [Streptomyces sp. SPB74] Length = 434 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 36/254 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 WF FI P+ ++ F+ L G +G++I+ + +++ PL KQ +T Sbjct: 7 WFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKATRA 66 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP++ ++E++K S Q + M++LYK NPLA C PIL+Q P FFA+Y V+ Sbjct: 67 MQTLQPEMKRIQERYK-SDKQRQSEEMMKLYKESGTNPLASCLPILVQSPFFFALYHVLD 125 Query: 449 ISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFYLPGFMHVG-----------IWPI 495 + G I D L +A +IF + + G +G + Sbjct: 126 GIASNKKI---GVINDKLLDSAQQAHIFGA-PLAAKFTSGADSLGADLTTVRIVTACMIV 181 Query: 496 IMSLSMFIQMKM---------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 +MS S F + P + Q M++ P++F +FP G+++YW +N Sbjct: 182 MMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLLYWLTTN 241 Query: 547 VISIVQQAVIMKMH 560 V ++ QQ +++ + Sbjct: 242 VWTMGQQMYVIRQN 255 >gi|9743337|gb|AAF97961.1|AC000103_11 F21J9.16 [Arabidopsis thaliana] Length = 519 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/271 (28%), Positives = 121/271 (44%), Gaps = 48/271 (17%) Query: 338 WFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYV------- 384 WF IA M ++ + + ++G AI+L TV VK FPL KKQ Sbjct: 96 WFSGIANYMETILKVLKDGLSTVHVPYSYGFAIILLTVLVKAATFPLTKKQVFTMISFLV 155 Query: 385 -------------STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 S MK++ P+I ++E++ ++ Q +LYK INPLAGC Sbjct: 156 HVIELVVYSLQVESAMAMKSLTPQIKAIQERYAGDQEKI-QLETARLYKLAGINPLAGCL 214 Query: 432 PILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAA----ADPTNIFTLFGILPFYLPG 486 P L IPV+ +Y+ +S ++ E + WI LA A N + + PF + G Sbjct: 215 PTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPF-IEG 273 Query: 487 FMHVGIWP-----------IIMSLSMFIQM---KMSPPPADKGQAMILNWMPVVFVFALS 532 +G WP ++ S + IQ+ S PA K + +P++ + Sbjct: 274 HPPLG-WPDTLAYLVLPLLLVFSQYLSIQIMQSSQSNDPAMKSSQAVTKLLPLMIGYFAL 332 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 S P+GL +YW +N++S QQ + K GA+ Sbjct: 333 SVPSGLSLYWLTNNILSTAQQVWLQKYGGAK 363 >gi|126651992|ref|ZP_01724184.1| OxaA-like protein precursor [Bacillus sp. B14905] gi|126591261|gb|EAZ85370.1| OxaA-like protein precursor [Bacillus sp. B14905] Length = 256 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 27/226 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W FI P+ + YF L+G + I+ T+ ++L PL KQ S+ M+ IQPK+ Sbjct: 36 WNEFIVWPLVSAIKYFAELLGTYAWGIIAVTIIIRLAILPLMIKQTKSSKKMQEIQPKLK 95 Query: 398 ELREKFKQSPPQVLQKA---MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 EL++K+ Q Q+ M++L +NPLAGC P+++Q+P+ Y IS Sbjct: 96 ELQKKYASKDAQTQQQYQQEMMKLMSESGVNPLAGCLPVIIQMPILIGFYHAIS------ 149 Query: 455 HAPFWGWIKDLAAADPTNIFTL--FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + T+ F L F I P P I L FI ++ P Sbjct: 150 ------------RMNATSTFDLGNFFIFPLADPA----PALAITAGLMQFIVLRTGPAMD 193 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +++ MP + + + PA L +YW N+ISI Q I K Sbjct: 194 NPQMKIMMYIMPFMIIAFGMALPAALSLYWVIGNIISIFQNLYIYK 239 >gi|302877173|ref|YP_003845806.1| membrane protein insertase, YidC/Oxa1 family [Clostridium cellulovorans 743B] gi|307687872|ref|ZP_07630318.1| putative inner membrane protein translocase component YidC [Clostridium cellulovorans 743B] gi|302580030|gb|ADL54042.1| membrane protein insertase, YidC/Oxa1 family [Clostridium cellulovorans 743B] Length = 224 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/120 (40%), Positives = 74/120 (61%), Gaps = 2/120 (1%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 NL + G++I++ ++F K+ FPL KQ S+ M+ IQP++ +L+ K+K S PQ L +A Sbjct: 26 NLNISVGLSIIVFSIFFKICLFPLNIKQIKSSFKMREIQPEVAKLQAKYK-SDPQKLNQA 84 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +QLYK +P AGC P+LLQ PV A+Y V + ++ F W+ DL+A DP I Sbjct: 85 TMQLYKESGASPFAGCLPLLLQWPVLMAMYFVFKDAEIIKGHSFL-WLTDLSARDPRYIL 143 >gi|269958144|ref|YP_003327933.1| 60 kDa inner membrane insertion protein [Xylanimonas cellulosilytica DSM 15894] gi|269306825|gb|ACZ32375.1| 60 kDa inner membrane insertion protein [Xylanimonas cellulosilytica DSM 15894] Length = 314 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 117/215 (54%), Gaps = 24/215 (11%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPP---QVLQKAMIQ 417 +AI+ T+ ++ PL KQ ++ M+ IQP++ +++K+K +S P + + + ++ Sbjct: 41 LAIVALTLIMRAAMIPLFVKQIKASRGMQIIQPELQAVQKKYKGKSDPASREAMTRETME 100 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK--DLAAADPTNIFT 475 LYK H NP A C PILLQ P+FFA+++V+S ++ + G I D A A + Sbjct: 101 LYKKHGTNPFASCLPILLQSPIFFALFRVLSNLQQIANGEI-GPIGPIDQAVASDFEASS 159 Query: 476 LFG--ILPFYL-----PGFMHVGIWPIIMSLSMF-----IQMKMSPPPADKG-----QAM 518 LFG + +L + V + I+MS + F + MK P A +G Q M Sbjct: 160 LFGAKLSEVFLQTDDTAARIVVIVLIILMSATTFLTQRQLTMKNMPKAALEGPMASTQKM 219 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +L +P++F + +FP G++IYW+ +N+ S+ QQ Sbjct: 220 MLYVLPLIFAVSGVNFPVGVLIYWTVTNIWSMGQQ 254 >gi|256843834|ref|ZP_05549321.1| stage III sporulation protein J [Lactobacillus crispatus 125-2-CHN] gi|256849611|ref|ZP_05555043.1| stage III sporulation protein J [Lactobacillus crispatus MV-1A-US] gi|262046279|ref|ZP_06019242.1| stage III sporulation protein J [Lactobacillus crispatus MV-3A-US] gi|295693884|ref|YP_003602494.1| stage iii sporulation protein j [Lactobacillus crispatus ST1] gi|312984010|ref|ZP_07791358.1| membrane protein OxaA [Lactobacillus crispatus CTV-05] gi|256613739|gb|EEU18941.1| stage III sporulation protein J [Lactobacillus crispatus 125-2-CHN] gi|256713727|gb|EEU28716.1| stage III sporulation protein J [Lactobacillus crispatus MV-1A-US] gi|260573609|gb|EEX30166.1| stage III sporulation protein J [Lactobacillus crispatus MV-3A-US] gi|295031990|emb|CBL51469.1| Stage III sporulation protein J [Lactobacillus crispatus ST1] gi|310894512|gb|EFQ43586.1| membrane protein OxaA [Lactobacillus crispatus CTV-05] Length = 291 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 22/220 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ TV V+++ PL ST M++IQP+I Sbjct: 49 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTVIVRVILVPLNAISIRSTTKMQSIQPQI 108 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+L+Q+PV +A+Y I + ++ Sbjct: 109 NELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLPVMYALYGAILRTPQL 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W+ DL+ DP I + + I LS +I +P + Sbjct: 169 QTGRFL-WM-DLSKPDPYYIMPILAM---------------IFTFLSTYISQLSTPKSSQ 211 Query: 514 KGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQ 552 G ++ + + V ++ +F + + +YW SN+ +Q Sbjct: 212 NGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQALQ 251 >gi|302520509|ref|ZP_07272851.1| membrane protein oxaA [Streptomyces sp. SPB78] gi|302429404|gb|EFL01220.1| membrane protein oxaA [Streptomyces sp. SPB78] Length = 447 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 36/254 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 WF FI P+ ++ F+ L G +G++I+ + +++ PL KQ +T Sbjct: 7 WFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKATRA 66 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP++ ++E++K S Q + M++LYK NPL+ C PIL+Q P FFA+Y V+ Sbjct: 67 MQTLQPEMKRIQERYK-SDKQRQSEEMMKLYKESGTNPLSSCLPILVQSPFFFALYHVLD 125 Query: 449 ISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFYLPGFMHVG-----------IWPI 495 + G I D L +A +IF + + G +G + Sbjct: 126 GIASNKKI---GVINDKLLDSAQQAHIFGAP-LAAKFTSGADSLGADLTTVRIVTACMIV 181 Query: 496 IMSLSMFIQMKM---------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 +MS S F + P + Q M++ PV+F +FP G+++YW +N Sbjct: 182 MMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLLYWLTTN 241 Query: 547 VISIVQQAVIMKMH 560 V ++ QQ +++ + Sbjct: 242 VWTMGQQMFVIRQN 255 >gi|288926777|ref|ZP_06420687.1| inner membrane protein OxaA [Prevotella buccae D17] gi|288336458|gb|EFC74834.1| inner membrane protein OxaA [Prevotella buccae D17] Length = 632 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 124/552 (22%), Positives = 242/552 (43%), Gaps = 72/552 (13%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGY--H----LDVSSNSPIVTLLSPSNTKNAYF-- 121 RV LKN + ++N KGA + ++ Y H D S + VTL + + Sbjct: 84 RVVLKNNKVELTLNSKGATVERAVVKNYVGHDINVKDGSKDRKDVTLFEGKDQSLKFMLA 143 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 A+ ++TA+ P++ T + + L + + L +S++ Sbjct: 144 AKEANINTADLYFTPSAQTDSTVTFTASAGAGRSLSLKYTLGRDYLLHMQLSVEGMGGLF 203 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 D T + Q R + R + + AT T+ G L + S +K + K S Sbjct: 204 APDMKTLDIDWQDRVKQQERGFTFENRYATLTYHETAGGTDYLSETS---EKVDEPCKES 260 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKE-------TSFHSQ--FKYLSDGHARYQAKFSAN 292 I W+ ++++++V I + TS + YL AR + F N Sbjct: 261 ID-------WVAFKNQFFSAVMIVKDDFQKNALLTSIPQEKGSGYLKQYQARLKTAFDPN 313 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWFYFIAKPMFML 349 G+ + F F G +F + E + + E L+ GW P+F Sbjct: 314 ------GRQPSEFEFYF-GPNDFRLLQKVEHESRFGKSLEMERLVYLGW------PLFRW 360 Query: 350 MS-----YFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 ++ Y ++ + N+ GI ++L T+ +K+L +P+ KK Y+S+A M+ ++PK++E + Sbjct: 361 INRFFTIYVFDFLRNYFPMGIVLILITLLLKVLTYPMVKKSYMSSAKMRVLKPKLEEATK 420 Query: 402 KFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 ++ + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + ++++R F Sbjct: 421 QYDKPEDQMQKQQAMMAEYSKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGQSFL- 479 Query: 461 WIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 W+KDL+ DP N++ + L F + ++ S Q + Sbjct: 480 WMKDLSTFDPLFEWNHNLWLIGDHLSLTCILFC---VAQVLYSWMTMRQQRDQMVGQQAE 536 Query: 516 QAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM---KMHGAEIGLID 568 Q ++ W MP++F F + + +GL Y+ +S+ A IM + + L++ Sbjct: 537 QMKMMQWMMYLMPLMFFFMFNDYSSGLNFYY----FVSLFFSAAIMWTLRKTTNDKKLLE 592 Query: 569 RLRSTFSKNYNS 580 L + + +N N+ Sbjct: 593 ILEARYRENKNN 604 >gi|239918804|ref|YP_002958362.1| preprotein translocase subunit YidC [Micrococcus luteus NCTC 2665] gi|281414969|ref|ZP_06246711.1| preprotein translocase subunit YidC [Micrococcus luteus NCTC 2665] gi|239840011|gb|ACS31808.1| preprotein translocase subunit YidC [Micrococcus luteus NCTC 2665] Length = 332 Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 31/210 (14%) Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPL 427 + L PL KQ + M+ IQP++ +L+ K+K Q+ ++AM L K H NP Sbjct: 49 RTLLIPLFVKQIKAQRAMQAIQPELQKLQAKYKGKKDQLSRQAMAMEQQALMKEHKANPF 108 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF---TLFGI----- 479 A C P+L+Q+P FFA+Y+V+ + R A G D +AD F T+FG Sbjct: 109 AACLPLLIQMPFFFALYQVL---IGARGAAERGEAMDALSADQIRSFEGSTIFGARMSDT 165 Query: 480 ------LPFYLPGFMHVGIWPIIMSLSMFIQMKM----------SPPPADKGQAMILNWM 523 P P + + ++MS SMF KM P + Q ++L M Sbjct: 166 FMNSLGAPGSGPVIVTAIVLILLMSGSMFFMQKMLMTKNMTQQALSGPMMQTQQIMLYAM 225 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P++F +FP G+++YW++SN ++ QQ Sbjct: 226 PLIFGIGGINFPIGVLLYWTYSNFWAVGQQ 255 >gi|326772847|ref|ZP_08232131.1| stage III sporulation protein J [Actinomyces viscosus C505] gi|326637479|gb|EGE38381.1| stage III sporulation protein J [Actinomyces viscosus C505] Length = 394 Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 28/219 (12%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQVLQK---AMIQ 417 ++I+ T+ V+LL PL KQ ++ M+ +QP++ L+ K+K + P+ Q+ M+ Sbjct: 38 LSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPEMQALQAKYKGKKDPESRQRMNEEMMA 97 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW--IKDLAA--ADPTNI 473 LY+ H NP+A C PIL+Q+P+FFA+++V++ SL A +G I L A+ Sbjct: 98 LYRKHGTNPMASCLPILVQMPIFFALFRVLA-SLGAVAAGKYGRPSIGPLTQQLAEQVQA 156 Query: 474 FTLFG----------------ILPFYLPGFMHVGIWPIIMSLS---MFIQMKMSPPPADK 514 ++FG I+ + M V W + LS M S P + Sbjct: 157 SSVFGASLSSSFLGSSDTQVKIVTVAMIVIMSVTQWYTMAQLSMKNMSTDSLNSDNPMIR 216 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 Q M+L MPV+F + +F G+++YW SN+ ++ QQ Sbjct: 217 SQRMMLYVMPVIFAVSGVNFQIGVLVYWVVSNLWTMGQQ 255 >gi|227513522|ref|ZP_03943571.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus buchneri ATCC 11577] gi|227524665|ref|ZP_03954714.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus hilgardii ATCC 8290] gi|227083395|gb|EEI18707.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus buchneri ATCC 11577] gi|227088149|gb|EEI23461.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus hilgardii ATCC 8290] Length = 343 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 65/238 (27%), Positives = 121/238 (50%), Gaps = 35/238 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMK 390 +G Y ++A+P +M +VG++G AI++ TV V++ P+ +Q S+ M+ Sbjct: 33 YGLVYDYLARPAQSIMEAIAQIVGSYGWAIVVLTVIVRMFLLPIMVRQMKSSTIQQERMQ 92 Query: 391 NIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++ EL+++ K + Q +AM+ LY+ +NI+ G C P+++Q+P+F A+Y Sbjct: 93 MIRPQMRELQQRQKAAKTTEEQTAASQAMMALYRQNNISMTGGIGCLPLIIQMPIFTALY 152 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S E+ H F G + + + + L + L G++ Sbjct: 153 AAIRYSPELSHTVFMG----IRLGQSSWLLAVLSFLSYLLQGYL---------------- 192 Query: 505 MKMSPPPADKGQ--AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 M + P A K Q AM+L ++ +F +S+ PAGL IY+ + + + Q +IM ++ Sbjct: 193 MMLGTPKAQKKQMGAMMLMSPIMILLFTISA-PAGLGIYFFIGGLFACL-QTIIMNLY 248 >gi|303286693|ref|XP_003062636.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] gi|226456153|gb|EEH53455.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] Length = 483 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 26/222 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G AI++ TV VKL+ FPL KKQ + M+ +QP++ EL+ + P+ LQ +L Sbjct: 140 SYGYAILVLTVVVKLVTFPLTKKQVEGSIAMQALQPRVKELQAMYAND-PERLQMETARL 198 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVIS--ISLEMRHAPFWGWIKDLAAADPTNIF-- 474 YK N NPLAGC P +PVF +Y+ +S + M F+ WI L PT+I Sbjct: 199 YKEANFNPLAGCLPTFATLPVFIGLYRALSNAATEGMLEDGFY-WIPSLGG--PTSIAAR 255 Query: 475 ---TLFGILPFYLPGFMHVG--------IWPIIMSLSMFIQMKMSPP-------PADKGQ 516 + F L ++ G +G P+++ +S F K+ P P+ Sbjct: 256 NDGSGFSWLWPFVDGAPPLGWHDTAAYLALPVLLVVSQFASQKIMTPDQGKDVDPSQASS 315 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 IL ++P + F + PAGL +YW +N+ S Q + K Sbjct: 316 QAILKFLPFMIGFFSLNVPAGLTLYWFANNIFSTAQTVYLRK 357 >gi|293380888|ref|ZP_06626924.1| putative stage III sporulation protein J [Lactobacillus crispatus 214-1] gi|290922561|gb|EFD99527.1| putative stage III sporulation protein J [Lactobacillus crispatus 214-1] Length = 291 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 105/203 (51%), Gaps = 22/203 (10%) Query: 355 NLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---V 410 L+GN +G AI++ TV V+++ PL ST M++IQP+I+ELR+K+ + + Sbjct: 66 KLMGNSYGWAIIVFTVIVRVILVPLNAISIRSTTKMQSIQPQINELRKKYPGRDTESRTL 125 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 LQ+ +LYK +NP GC P+L+Q+PV +A+Y I + +++ F W+ DL+ DP Sbjct: 126 LQQETNKLYKEAGVNPYTGCLPVLIQLPVMYALYGAILRTPQLQTGRFL-WM-DLSKPDP 183 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I + + I LS +I +P + G ++ + + V Sbjct: 184 YYIMPILAM---------------IFTFLSTYISQLSTPKSSQNGMTKVMMYGMSIMVGV 228 Query: 531 LS-SFPAGLIIYWSWSNVISIVQ 552 ++ +F + + +YW SN+ +Q Sbjct: 229 MALNFQSAITLYWVISNLFQALQ 251 >gi|117929365|ref|YP_873916.1| 60 kDa inner membrane insertion protein [Acidothermus cellulolyticus 11B] gi|117649828|gb|ABK53930.1| 60 kDa inner membrane insertion protein [Acidothermus cellulolyticus 11B] Length = 315 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 113/227 (49%), Gaps = 28/227 (12%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 +G++++L TV V++L FPL KQ S M + PK+ EL+ K+K ++ + M L Sbjct: 34 TWGLSVVLLTVIVRILLFPLFVKQVRSQRAMTELAPKLKELQAKYKNDRERLGTETM-AL 92 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA-------PFWGW-IKDLAAADP 470 Y+ H +NP GC PIL Q PVF+A++ V+ + + P +GW + L +A Sbjct: 93 YREHGVNPFMGCLPILAQAPVFYALFHVLRYVSDHGSSKPPAGFHPEYGWTVSLLQSAGH 152 Query: 471 TNIFTLFGILPFYL----PGF------MHVGIWPIIMSLS---------MFIQMKMSPPP 511 +F + L F P F +HV I++++ + ++ + P Sbjct: 153 AKVFGVPLALGFRTADRAPMFGADSTTVHVVTLLAILAMATTTFLTQRQLIVKNAAAGNP 212 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + Q M+L +P +F + + G+++YW SN+ S+ QQ I++ Sbjct: 213 MAQQQKMLLYVLPPIFALSGLLWQMGVLVYWVTSNLWSLGQQHYIIR 259 >gi|320532819|ref|ZP_08033596.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral taxon 171 str. F0337] gi|320134970|gb|EFW27141.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral taxon 171 str. F0337] Length = 397 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 28/219 (12%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQVLQK---AMIQ 417 ++I+ T+ V+LL PL KQ ++ M+ +QP++ L+ K+K + P+ Q+ M+ Sbjct: 38 LSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPELQALQAKYKGKKDPESRQRMNEEMMA 97 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADPTNI 473 LY+ H NP+A C PIL+Q+P+FFA+++V+ +++ P G + A+ Sbjct: 98 LYRKHGTNPMASCLPILVQMPIFFALFRVLASLGAVATGKYGRPSIGPLTQ-QLAEQVQA 156 Query: 474 FTLFG----------------ILPFYLPGFMHVGIWPIIMSLS---MFIQMKMSPPPADK 514 ++FG I+ + M V W + LS M + S P + Sbjct: 157 SSVFGASLSSSFLSSSDTQVKIVTVAMIIIMSVTQWYTMAQLSMKNMSTESLNSDNPMIR 216 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 Q M+L MPV+F + +F G+++YW SN+ ++ QQ Sbjct: 217 SQRMMLYVMPVIFAVSGVNFQIGVLVYWVVSNLWTMGQQ 255 >gi|289705892|ref|ZP_06502271.1| membrane protein insertase, YidC/Oxa1 family [Micrococcus luteus SK58] gi|289557377|gb|EFD50689.1| membrane protein insertase, YidC/Oxa1 family [Micrococcus luteus SK58] Length = 332 Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 31/210 (14%) Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPL 427 + L PL KQ + M+ IQP++ +L+ K+K Q+ ++AM L K H NP Sbjct: 49 RTLLIPLFVKQIKAQRAMQAIQPELQKLQAKYKGKKDQLSRQAMAMEQQALMKEHKANPF 108 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF---TLFGI----- 479 A C P+L+Q+P FFA+Y+V+ L R A G D +A+ F T+FG Sbjct: 109 AACLPLLVQMPFFFALYQVL---LGARGAAERGEAMDALSAEQIRSFEGSTIFGARMSDT 165 Query: 480 ------LPFYLPGFMHVGIWPIIMSLSMFIQMKM----------SPPPADKGQAMILNWM 523 P P + + ++MS SMF KM P + Q ++L M Sbjct: 166 FMNSLGAPGSTPVIVTAIVLILLMSGSMFFMQKMLMTKNMTQQALTGPMMQTQQVMLYAM 225 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P++F +FP G+++YW++SN ++ QQ Sbjct: 226 PLIFGIGGINFPIGVLLYWTYSNFWAVGQQ 255 >gi|89897803|ref|YP_521290.1| hypothetical protein DSY5057 [Desulfitobacterium hafniense Y51] gi|219670952|ref|YP_002461387.1| hypothetical protein Dhaf_4959 [Desulfitobacterium hafniense DCB-2] gi|89337251|dbj|BAE86846.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219541212|gb|ACL22951.1| 60 kDa inner membrane insertion protein [Desulfitobacterium hafniense DCB-2] Length = 231 Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 71/232 (30%), Positives = 120/232 (51%), Gaps = 41/232 (17%) Query: 346 MFMLMSYFYNLV-----GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 M L+ + YNL ++G+AI+L T+ +K L +PL KQ S IQPK+ E++ Sbjct: 8 MTELLKWLYNLTDLVGFASYGLAIILLTIIIKTLIYPLTWKQMKSMRKTMEIQPKLQEIQ 67 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 +K+K +P ++ Q+ M +LYK HN+NP GC P+L+Q+P+F+A+Y + Sbjct: 68 KKYKNNPEKLNQETM-ELYKKHNLNPAGGCLPLLVQLPIFWALYNTL------------- 113 Query: 461 WIKDLAAADPTN-IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS----------- 508 + D ADP+ +F F I G + + I+ + F+Q K++ Sbjct: 114 FHFDNYIADPSQAMFLWFSITE---NGNL---VLAILAGATTFLQTKLTTASNPAMKAQN 167 Query: 509 ----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P A Q M+L +MP+ + + P+GL +Y+ N++S++QQ I Sbjct: 168 NTGKPDAAQSTQKMMLYFMPLFMAYITWTVPSGLGLYFFTMNIVSVLQQLYI 219 >gi|150021506|ref|YP_001306860.1| 60 kDa inner membrane insertion protein [Thermosipho melanesiensis BI429] gi|149794027|gb|ABR31475.1| 60 kDa inner membrane insertion protein [Thermosipho melanesiensis BI429] Length = 433 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 26/217 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GWF FI P+ + + NFG+ I++ T+ ++ + +PL Q S M+ +QP + Sbjct: 213 GWFDFILYPLVYFFGWINDFTKNFGLTIIVFTIIIRFVLYPLYHSQTKSMIKMRKLQPIV 272 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MR 454 +++++K+K PQ Q+ +++ Y+ + INP +GC L+Q+P+F +Y+VI E Sbjct: 273 EQIKKKYKD--PQKQQQELLKAYRENKINPASGCLMALVQLPIFIILYQVIRYYQEEFAF 330 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS-MFIQMKMSPPPAD 513 F W +DL A GF ++ II ++ ++ + S Sbjct: 331 SGKFLIW-RDLTAG-----------------GFSANWVFLIIQIVAGYYLALITSQDTRT 372 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 Q++I M +F F P+G+ +Y++ + +I + Sbjct: 373 AWQSII---MSFIFPFLFIGLPSGVFLYYTANTLIQV 406 >gi|284034939|ref|YP_003384870.1| 60 kDa inner membrane insertion protein [Kribbella flavida DSM 17836] gi|283814232|gb|ADB36071.1| 60 kDa inner membrane insertion protein [Kribbella flavida DSM 17836] Length = 412 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 74/261 (28%), Positives = 127/261 (48%), Gaps = 53/261 (20%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT--TVFVKLLFFPLAKKQYVSTANM 389 +L+ W W L+S + G + A+ + T+ ++ L PL +Q S+ NM Sbjct: 34 LLVGWHW----------LLSQVLDPNGGWAWALSIAGLTIVIRTLLIPLFVRQIRSSRNM 83 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ EL++K+ ++ Q+ M++LYK NP + C P+LLQ PVF A+++V+ Sbjct: 84 QLLQPKMKELQKKYGHDREKLGQE-MMKLYKETGTNPFSSCLPLLLQSPVFLALFRVLDG 142 Query: 450 SLE--------------MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 + + +RHA +G A+ + F L G +V I I Sbjct: 143 ASKGEAHSSIIAPHVNSLRHAKIFG-------AEISQTF-----LRANGDGSTNVKIVAI 190 Query: 496 I----MSLSMFIQM-----KMSPPPADKGQA-----MILNWMPVVFVFALSSFPAGLIIY 541 + M+ +MFI K P A +GQA ++L P+ F+ +FP G++IY Sbjct: 191 VLIILMTATMFITQLQLMRKNMPKEALEGQAAQMQKIMLYVFPIFFLIGGFNFPIGVLIY 250 Query: 542 WSWSNVISIVQQAVIMKMHGA 562 W SNV ++ QQ +++ + A Sbjct: 251 WFVSNVWTMGQQFYVIRRNPA 271 >gi|227508124|ref|ZP_03938173.1| inner membrane insertion protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227511149|ref|ZP_03941198.1| inner membrane insertion protein [Lactobacillus buchneri ATCC 11577] gi|227523336|ref|ZP_03953385.1| inner membrane insertion protein [Lactobacillus hilgardii ATCC 8290] gi|227085631|gb|EEI20943.1| inner membrane insertion protein [Lactobacillus buchneri ATCC 11577] gi|227089527|gb|EEI24839.1| inner membrane insertion protein [Lactobacillus hilgardii ATCC 8290] gi|227192353|gb|EEI72420.1| inner membrane insertion protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 278 Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 23/223 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW + +S F++ N+G+ I++ T+ V+++ PL Q S + +QP++ Sbjct: 39 GWVVLNFSRAIIWLSKFFS--DNYGMGIIIFTILVRIVILPLMIYQTRSMRKTQEVQPQL 96 Query: 397 DELREKFKQSPPQVLQKAMIQ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + +QK + LY INPLAGC P+++Q+P+ FA+Y+ I + + Sbjct: 97 KALQKKYSSRDAETMQKLQAEQKKLYAEAGINPLAGCLPMIVQMPILFALYQAIWRTDIL 156 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R F+ W++ L DP IF +LP F + W L+M Q P ++ Sbjct: 157 RSGTFF-WLQ-LGHPDP--IF----VLPVLAALFTFISSW-----LAMKGQ-----PESN 198 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M+ MP+ + S P+ L +YW +N + Q VI Sbjct: 199 SMTTMMTIGMPIFILIMAVSLPSALSLYWVITNAFQVGQTLVI 241 >gi|323455292|gb|EGB11161.1| hypothetical protein AURANDRAFT_22501 [Aureococcus anophagefferens] Length = 366 Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 112/209 (53%), Gaps = 18/209 (8%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++GI+I+L T F++ + +PL Y ST K ++P +D++++++ + Q + A +L Sbjct: 67 SWGISIILFTAFLRTVIYPLNFISYESTERNKALKPYMDKIKDRYGEDQ-QAVNLATAKL 125 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 Y+ NPLAGC P + QIPVF A+Y+ V++++ + + + ++ +L N + Sbjct: 126 YEMTETNPLAGCLPAIAQIPVFIALYRSVLNLAFDQKIGEGFFFVPNLEGPTYDNGRGIQ 185 Query: 478 GILPFYLPGFMHVGIW---------PIIMSLSMFIQMKMSPPPAD------KGQAMILNW 522 + ++ G +G W P+ + ++ I M++ PP D + +L + Sbjct: 186 WLTDNWVDGVPSLG-WHDTLAFLALPVALVITQSISMRVLTPPPDPNDKSAQNANRVLKY 244 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIV 551 +P++ + ++ P+GL +YW SNV S+ Sbjct: 245 LPLMIGWFSANVPSGLGLYWMTSNVFSVA 273 >gi|293572715|ref|ZP_06683679.1| membrane protein OxaA 1 [Enterococcus faecium E980] gi|291607207|gb|EFF36565.1| membrane protein OxaA 1 [Enterococcus faecium E980] Length = 272 Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 27/205 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV---LQKA 414 GN GI I+L T+ ++++ PL Q S + +QPK+ L++++ P+ L++ Sbjct: 54 GNAGIGIILFTLIIRVILLPLMHFQTKSMRKTQELQPKLKALQQQYSSRDPETQSKLREE 113 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY + +NP AGC P+L+Q+P+ A+++ IS E++ F W+ +L ADPT I Sbjct: 114 QQRLYAENGVNPYAGCLPLLVQMPILMALWQSISRVPELKQGHFL-WL-NLGNADPTFIL 171 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--MILNW-MPVVFVFAL 531 PI+ ++ F +S + A I+N+ MPV+ + Sbjct: 172 -------------------PILAAIFTFASTYLSSMSQIESNASMKIMNFVMPVMILVMG 212 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 + +GL +YW SN +VQ +I Sbjct: 213 VNLASGLSLYWVVSNAFQVVQTLLI 237 >gi|320009746|gb|ADW04596.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces flavogriseus ATCC 33331] Length = 418 Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 72/251 (28%), Positives = 111/251 (44%), Gaps = 43/251 (17%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ L G G++I+ V +++ PL KQ ST NM Sbjct: 8 FSFITTPVSWVIVQFHKLYGALFGDDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QVLQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLS- 125 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH------------------VG 491 + G I D D +FG P FM Sbjct: 126 --AIASGKTIGVI-DQPLLDSARQAHIFGA-PLAAK-FMDSEEKVSALGASLTDVRVVTA 180 Query: 492 IWPIIMSLSMFIQMKM---------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I ++MS S F + P + Q M++ PV+F +FP G+++YW Sbjct: 181 IMIVMMSASQFFTQRQLMTKNVDLTVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYW 240 Query: 543 SWSNVISIVQQ 553 +NV ++ QQ Sbjct: 241 LTTNVWTMGQQ 251 >gi|269838379|ref|YP_003320607.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus DSM 20745] gi|269787642|gb|ACZ39785.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus DSM 20745] Length = 278 Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 33/210 (15%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 + G+ G+A++L T+ +K+ P+ + STA ++ IQP + EL+EK+ Q Sbjct: 21 VTGSAGLAVILFTLLLKIALLPITVRTRRSTAALRAIQPALRELQEKYPDD-RQRRSAET 79 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG----WIKDLAAADPT 471 ++LY+ H INP AGC P +++IP F + I L W W+ DLA ADP Sbjct: 80 LKLYQQHGINPAAGCLPTVIKIPFFIGLIAAIR-ELSRSGDGAWTESFLWLPDLATADPL 138 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--------QAMILNWM 523 +I PI L + M+ P +G +A + Sbjct: 139 HIL-------------------PIAAGLFQLLTGMMARPAGQRGAARGKGQARAGLALLS 179 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P + V PAG ++YW+ S + SI +Q Sbjct: 180 PAIVVAIGWHAPAGPVLYWAVSALFSIGEQ 209 >gi|288800073|ref|ZP_06405532.1| inner membrane protein OxaA [Prevotella sp. oral taxon 299 str. F0039] gi|288333321|gb|EFC71800.1| inner membrane protein OxaA [Prevotella sp. oral taxon 299 str. F0039] Length = 632 Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 131/555 (23%), Positives = 245/555 (44%), Gaps = 94/555 (16%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 V LK+ L ++N KGA ++ ++G+ D + N P VTL + SN +N + Sbjct: 85 VTLKSEKLTLTLNSKGAVVREVLIKGFK-DRNGN-PNVTLFN-SNDQNLRYILSTKEENI 141 Query: 131 NNIEL---PNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVT 187 + EL P++ T + L T + + ++ +N L +I +T + Sbjct: 142 DTKELYFQPSNVTDSTVTFTAQLQGTKKLVINYQLKHNYLLHTSIQAQGMNAIFAPNTNS 201 Query: 188 NNSI--DQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS-LVEQKYSDIEKSSISN 244 + + D+ R +G ++ T T + +G L + S V++K D Sbjct: 202 MDIVWQDKCRQQEKGFTFENRYSTLT--YHKADGGTDYLSESSEKVDEKIED-------- 251 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFK---------YLSDGHARYQAKFSANEIT 295 W+ ++++++V I + ++ YL D A+ + F Sbjct: 252 ---KLDWVAFKNQFFSAVMIAKDDFQSNTLLTSVPQEKGSGYLKDYEAKLKTFFDP---- 304 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYE-------KDLAIPRFEMLIDWGWFYFIAKPMFM 348 GK T F + G +F + + E KDL + R L+ GW P+F Sbjct: 305 --TGKKPTEFEFYY-GPNDFRLLQNIEDNVSFIGKDLQMQR---LVYLGW------PLFR 352 Query: 349 LMS-----YFYNLVG----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +++ Y ++ + N GI ++L T+ +K L +PL KK Y+S+A M+ ++P+++E Sbjct: 353 IINRWFTIYVFDFLTSMNMNMGIVLILITLLLKFLTYPLVKKSYMSSAKMRVLKPRLEEA 412 Query: 400 REKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + ++++R F Sbjct: 413 TKHLNGADNQMQKQQAMMSEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGESF 472 Query: 459 WGWIKDLAAADPT----NIFTLFGILPFYLPGFMHVGIWPIIMS----LSMFIQMK---- 506 WI DL+ DP N + L G H+ + I+ L ++ MK Sbjct: 473 L-WISDLSTYDPILEWHNNYWLIGD---------HLSLTCILFCAANLLYSWMTMKQQKD 522 Query: 507 -MSPPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M AD+ + M ++ MP++F F + + AGL Y+ S S + ++ K E Sbjct: 523 QMIGQQADQMKMMQYMMFVMPLMFFFMFNDYSAGLNFYYFMSLFFSALIMWILRKTTDDE 582 Query: 564 IGLIDRLRSTFSKNY 578 +L S K Y Sbjct: 583 -----KLLSILDKKY 592 >gi|254302384|ref|ZP_04969742.1| inner membrane protein YidC [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322576|gb|EDK87826.1| inner membrane protein YidC [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 205 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 69/224 (30%), Positives = 117/224 (52%), Gaps = 37/224 (16%) Query: 350 MSYFYNL---------------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 MSY YNL VGNFGI+I++ T+ +K+L PL KQ S MK +QP Sbjct: 1 MSYIYNLLKQFLAFLLNTTDKYVGNFGISIIIVTILIKILLLPLTLKQDKSMKEMKKLQP 60 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++++++K+ Q+L ++LY+ H +NPL GC PIL+Q+P+ FA++ V+ + Sbjct: 61 ELEKIKQKYAND-KQMLNIKTMELYREHKVNPLGGCLPILVQLPILFALFGVLRSGIIPT 119 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + F W+K L+ D PF+ I P++ F+Q K+ + Sbjct: 120 DSSFL-WMK-LSEPD-----------PFF--------ILPVLNGAVSFLQQKLMGTSDNA 158 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ P++ + P+GL +YW S++I+++QQ IMK Sbjct: 159 QMKNMMYVFPIMMIVISYKMPSGLQLYWLTSSLIAVIQQYFIMK 202 >gi|168183723|ref|ZP_02618387.1| membrane protein OxaA [Clostridium botulinum Bf] gi|237797102|ref|YP_002864654.1| putative inner membrane protein translocase component YidC [Clostridium botulinum Ba4 str. 657] gi|182673143|gb|EDT85104.1| membrane protein OxaA [Clostridium botulinum Bf] gi|229260568|gb|ACQ51601.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum Ba4 str. 657] Length = 217 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 22/203 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++GIAI+L T+ ++LL PL KQ S+ M +QP+I +L+ K+K P ++ QK M +L Sbjct: 29 SYGIAIILVTLIIRLLILPLNIKQTKSSLRMNELQPEIKKLQAKYKNDPQRLNQKTM-EL 87 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NPL GC P+L+Q P+F A+Y V + + F W+KDLA D + L G Sbjct: 88 YKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTGINGISFL-WVKDLAKPDVV-LAVLSG 145 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS-SFPAG 537 ++ M SP + GQ +N +F+ +S + Sbjct: 146 ATTYFSGTLMT------------------SPDNSQAGQMKSMNIGMSIFMIVISWKLKSA 187 Query: 538 LIIYWSWSNVISIVQQAVIMKMH 560 L++YW +N+I I+Q ++ KM Sbjct: 188 LVLYWVINNLIQIIQTVIMKKME 210 >gi|325066325|ref|ZP_08124998.1| 60 kDa inner membrane insertion protein [Actinomyces oris K20] Length = 394 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 28/219 (12%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQVLQK---AMIQ 417 ++I+ T+ V+LL PL KQ ++ M+ +QP++ L+ K+K + P+ Q+ M+ Sbjct: 38 LSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPELQALQAKYKGKKDPESRQRMNEEMMA 97 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW--IKDLAA--ADPTNI 473 LY+ H NP+A C PIL+Q+P+FFA+++V++ SL +G I L A+ Sbjct: 98 LYRKHGTNPMASCLPILVQMPIFFALFRVLA-SLGAVAGGTYGRPSIGPLTQQLAEQVQA 156 Query: 474 FTLFG----------------ILPFYLPGFMHVGIWPIIMSLS---MFIQMKMSPPPADK 514 ++FG I+ + M V W + LS M S P + Sbjct: 157 SSVFGASLSSSFLGSSDTQVKIVTVAMIIIMSVTQWYTMAQLSMKNMSTDSLNSDNPMIR 216 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 Q M+L MPV+F + +F G+++YW SN+ ++ QQ Sbjct: 217 SQRMMLYVMPVIFAVSGVNFQIGVLVYWVVSNLWTMGQQ 255 >gi|145597099|ref|YP_001161396.1| 60 kDa inner membrane insertion protein [Salinispora tropica CNB-440] gi|145306436|gb|ABP57018.1| 60 kDa inner membrane insertion protein [Salinispora tropica CNB-440] Length = 370 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 38/228 (16%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ V V+++ FP+ KQ S M+ +QP++ L+EK K + LQK M++LY+ Sbjct: 39 LAIIFLVVTVRVILFPVFVKQIKSQRAMQALQPQVKALQEKHKGDR-ETLQKEMMELYRK 97 Query: 422 HNINPLAGCWPILLQIPVFFAIYKV---ISISLEMRHAPFWGWIKD-------------- 464 NPL GC P+ LQIPVF ++ V ++ + + +GW D Sbjct: 98 EKANPLMGCLPMFLQIPVFLGLFHVLRRLNPNKDESGKTLYGWTVDQFDSVSVAKLFTAP 157 Query: 465 -----------LAA--ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 LAA AD T + + GIL + G + + S M ++ + P Sbjct: 158 IAGKFGSSPEELAALGADGTTVKIMAGILVLLMMGTTY------LTSRQMILKTGWAEDP 211 Query: 512 ADKG-QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + Q ++L +P + + + FP G+IIYW +N+ ++ QQ +++ Sbjct: 212 QQRMIQRLMLYGIPASLLISGAIFPIGVIIYWVTNNLFTLAQQQWVLR 259 >gi|227550637|ref|ZP_03980686.1| stage III sporulation protein J precursor [Enterococcus faecium TX1330] gi|257888098|ref|ZP_05667751.1| inner membrane protein [Enterococcus faecium 1,141,733] gi|257896284|ref|ZP_05675937.1| inner membrane protein [Enterococcus faecium Com12] gi|257899268|ref|ZP_05678921.1| inner membrane protein [Enterococcus faecium Com15] gi|293379365|ref|ZP_06625509.1| putative stage III sporulation protein J [Enterococcus faecium PC4.1] gi|227180238|gb|EEI61210.1| stage III sporulation protein J precursor [Enterococcus faecium TX1330] gi|257824152|gb|EEV51084.1| inner membrane protein [Enterococcus faecium 1,141,733] gi|257832849|gb|EEV59270.1| inner membrane protein [Enterococcus faecium Com12] gi|257837180|gb|EEV62254.1| inner membrane protein [Enterococcus faecium Com15] gi|292641888|gb|EFF60054.1| putative stage III sporulation protein J [Enterococcus faecium PC4.1] Length = 272 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 27/205 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV---LQKA 414 GN GI I+L T+ ++++ PL Q S + +QPK+ L++++ P+ L++ Sbjct: 54 GNAGIGIILFTLIIRVILLPLMHFQTKSMRKTQELQPKLKALQQQYSSRDPETQSKLREE 113 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY + +NP AGC P+L+Q+P+ A+++ IS E++ F W+ +L ADPT I Sbjct: 114 QQRLYAENGVNPYAGCLPLLVQMPILMALWQSISRVPELKQGHFL-WL-NLGNADPTFIL 171 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--MILNW-MPVVFVFAL 531 PI+ ++ F +S + A I+N+ MPV+ + Sbjct: 172 -------------------PILAAIFTFASTYLSSMSQIESNASMKIMNFVMPVMILVMG 212 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 + +GL +YW SN +VQ +I Sbjct: 213 VNLASGLSLYWVVSNAFQVVQTLLI 237 >gi|170760805|ref|YP_001788987.1| putative inner membrane protein translocase component YidC [Clostridium botulinum A3 str. Loch Maree] gi|169407794|gb|ACA56205.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum A3 str. Loch Maree] Length = 217 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 22/203 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++GIAI+L T+ ++LL PL KQ S+ M +QP+I +L+ K+K P ++ QK M +L Sbjct: 29 SYGIAIILVTLIIRLLILPLNIKQTKSSLRMNELQPEIKKLQAKYKNDPQKLNQKTM-EL 87 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NPL GC P+L+Q P+F A+Y V + + F W+KDLA D + L G Sbjct: 88 YKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTGINGISFL-WVKDLAKPDVV-LAVLSG 145 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS-SFPAG 537 ++ M SP + GQ +N +F+ +S + Sbjct: 146 ATTYFSGTLMT------------------SPDNSQAGQMKSMNIGMSIFMIVISWKLKSA 187 Query: 538 LIIYWSWSNVISIVQQAVIMKMH 560 L++YW +N+I I+Q ++ KM Sbjct: 188 LVLYWVINNLIQIIQTVIMKKME 210 >gi|167957213|ref|ZP_02544287.1| 60 kDa inner membrane insertion protein [candidate division TM7 single-cell isolate TM7c] Length = 307 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 81/131 (61%), Gaps = 2/131 (1%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI +P+ L+ Y+L+ +FGI+I++ T+ V+LL +PL KKQ M+ +QP++ +++ Sbjct: 7 FIVRPILNLLMAIYSLIPDFGISIIVFTILVRLLLWPLIKKQLHQAKAMRKMQPELAKIK 66 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 +++ ++ PQ+ AM++LYK HNI+ +++Q+P+ A+Y+V+ I + R A Sbjct: 67 KQYAKN-PQMRNLAMMELYKKHNISAFGSIGVLIIQLPILIAMYRVVQIFVSSR-ADLGK 124 Query: 461 WIKDLAAADPT 471 ++ D P Sbjct: 125 YVYDFVKNLPV 135 >gi|159040588|ref|YP_001539841.1| 60 kDa inner membrane insertion protein [Salinispora arenicola CNS-205] gi|157919423|gb|ABW00851.1| 60 kDa inner membrane insertion protein [Salinispora arenicola CNS-205] Length = 338 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 38/228 (16%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ V V+++ FP+ KQ S M+ +QP++ L+EK K + LQK M++LY+ Sbjct: 40 LAIIFLVVTVRVILFPVFVKQIKSQRAMQALQPQVKALQEKHKGDR-ETLQKEMMELYRK 98 Query: 422 HNINPLAGCWPILLQIPVFFAIYKV---ISISLEMRHAPFWGWIKD-------------- 464 NPL GC P+ LQIPVF ++ V ++ + +GW D Sbjct: 99 EKANPLMGCLPMFLQIPVFLGLFHVLRRLNPDKPLDKKTLYGWTVDQFDSASVAKLFTAP 158 Query: 465 -----------LA--AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 LA AD T + + GIL + G + + S M ++ + P Sbjct: 159 IAGKFGSSAEELARLGADGTTVKIMAGILVLVMMGTTY------LTSRQMILKTGWAEDP 212 Query: 512 ADKG-QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + Q ++L +P + + + FP G+IIYW +N+ ++ QQ +++ Sbjct: 213 QQRMIQRLMLYGIPASLLISGAIFPIGVIIYWVTNNMFTLAQQQWVLR 260 >gi|227893841|ref|ZP_04011646.1| stage III sporulation protein J [Lactobacillus ultunensis DSM 16047] gi|227864330|gb|EEJ71751.1| stage III sporulation protein J [Lactobacillus ultunensis DSM 16047] Length = 291 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 29/224 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + NL+ N +G AI++ T+ V+++ PL ST M++IQP+I Sbjct: 56 WDRWIVYYMSAFILWLANLMNNSYGWAIIVFTIIVRVILLPLNAISIRSTTKMQSIQPQI 115 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+L+Q+PV +A+Y I + ++ Sbjct: 116 NELRKKYPGRDTESRTLLQRETNKLYKEAGVNPYTGCLPVLVQLPVMYALYGAILRTPQL 175 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W+ DL+ DP + I+P L+M +P + Sbjct: 176 QTGRFL-WM-DLSKPDP------YFIMPI----------------LAMAFTFLSTPASSQ 211 Query: 514 KGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAVI 556 G I+ + + V ++ F + + +YW SN+ VQ ++ Sbjct: 212 NGMTKIMTYGMSIMVGVMALQFQSAITLYWVISNMFQAVQTFIL 255 >gi|311897303|dbj|BAJ29711.1| putative OxaA family protein [Kitasatospora setae KM-6054] Length = 397 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 113/227 (49%), Gaps = 21/227 (9%) Query: 349 LMSYFYNLVGNF--GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 L S+ ++ G G++I++ V +++ PL KQ +T M+ IQPK+ ++E++K Sbjct: 23 LFSHVFDPDGGLAWGLSIVMMVVVIRICLIPLFVKQIKATRAMQAIQPKMKAIQERYKND 82 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD-- 464 Q + M++LYK NP + C PIL+Q P F A+Y V++ + + G I Sbjct: 83 K-QRQSEEMMKLYKEAGTNPFSSCLPILVQAPFFTALYGVLA---SIANDKTIGVIDQPL 138 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHV----GIWPIIMSLSMFIQMKM---------SPPP 511 L +A +IF F + + + ++MSLS F+ + P Sbjct: 139 LESAKQAHIFGAPLSAKFVGAETVQIQIVCAVMIVLMSLSQFVTQRQLMTKNVDLSVKTP 198 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + Q M++ P++F +FP G+++YW +NV S+ QQ V+++ Sbjct: 199 FMQQQKMLMYVFPIMFAVMGINFPVGVLVYWLTTNVWSMAQQLVVIR 245 >gi|257065515|ref|YP_003145187.1| preprotein translocase subunit YidC [Slackia heliotrinireducens DSM 20476] gi|256793168|gb|ACV23838.1| preprotein translocase subunit YidC [Slackia heliotrinireducens DSM 20476] Length = 257 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/229 (25%), Positives = 119/229 (51%), Gaps = 31/229 (13%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F + +F N+ G++G+AI++ TV +++ P+ Q S+ M+ +QP + E++ K+ Sbjct: 9 IFDCIQFFANVCGDWGLAIIIITVIFRVIVSPIMHSQIKSSYQMQKVQPLMQEIQTKYAN 68 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + +Q+ M +LY + NPLAGC P+ LQ+P+F A+++ +++L Sbjct: 69 DQAR-MQEEMQKLYAETHFNPLAGCLPMFLQMPIFIAMFQT---------------LREL 112 Query: 466 AAADPTNIFTLFGILP--------FYLPGFMHVGIWPIIM---SLSMFIQM---KMSPPP 511 A+ ++T + I+ + GF + ++M + + F+ M M Sbjct: 113 ASHGTGEVYTFYTIVEDLTKTPKDMWAVGFGDFLPYLVLMLVFAFATFVPMMLQNMKSDS 172 Query: 512 ADKGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAVIMKM 559 A + Q +I+ M + + +S S PAG++++W S++I I QQ + ++ Sbjct: 173 AQRNQMLIMGGMMTLMMLWISWSSPAGVLLFWGASSIIGIAQQQITQRI 221 >gi|320161691|ref|YP_004174916.1| hypothetical protein ANT_22900 [Anaerolinea thermophila UNI-1] gi|319995545|dbj|BAJ64316.1| hypothetical membrane protein [Anaerolinea thermophila UNI-1] Length = 276 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 129/248 (52%), Gaps = 30/248 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ--P 394 W I +P ++ Y+ +G NFGIAI+L T+ ++L+ PL Q + M +Q P Sbjct: 2 WDLLIIQPFTNVLLLIYSYLGQNFGIAIILFTLLIRLITHPLMVSQIKGSQKMMELQNHP 61 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 + EL+EK+K Q LQ+ +L + INP A C P+L+Q P+ +Y+ S+ M Sbjct: 62 RYKELQEKYKNDR-QKLQEEQAKLIQELKINPFASCLPLLIQFPIIIGLYQ--SLYKAMP 118 Query: 455 HAP---------FWGWIKDLAAADPTNIFTLFGILP----FYLPGFMHVGI--WPIIMSL 499 + P + ++ D+ A P N L+ L YLP F+ GI I+++L Sbjct: 119 NTPHDLLNLTRILYSFV-DINAILPINNQFLWMDLSQPERLYLP-FLPFGIPVLAIVVAL 176 Query: 500 SMFIQMKM-SPPPADKGQ------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + +IQ ++ +PPP++ M+ +MP + + + +GL +Y+ SNVI I+Q Sbjct: 177 TTYIQGRLITPPPSNPNDQTAMMSGMMNLYMPFLMGYMGLTLASGLSLYFIVSNVIGILQ 236 Query: 553 QAVIMKMH 560 A++ K++ Sbjct: 237 YALLGKVN 244 >gi|282863323|ref|ZP_06272382.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE] gi|282561658|gb|EFB67201.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE] Length = 423 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 112/248 (45%), Gaps = 37/248 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ L G G++I+ V +++ PL KQ ST NM Sbjct: 8 FSFITTPVSWVIVQFHKLYGAIFGDDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QVLQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLS- 125 Query: 450 SLEMRHAPFWGWIKD--LAAADPTNIFTL------------FGILPFYLPGFMHV-GIWP 494 + G I L +A +IF L L V I Sbjct: 126 --AIASGKTIGVIDQPLLDSARQAHIFGAPLAAKFMDSDDKVAALGASLTDVRVVTAIMI 183 Query: 495 IIMSLSMFIQMKM---------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MS S F + P + Q M++ P++F +FP G+++YW + Sbjct: 184 VMMSASQFFTQRQLMTKNVDLTVKTPYMQQQKMLMYIFPLIFAVMGINFPVGVLVYWLTT 243 Query: 546 NVISIVQQ 553 NV ++ QQ Sbjct: 244 NVWTMGQQ 251 >gi|320333667|ref|YP_004170378.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus maricopensis DSM 21211] gi|319754956|gb|ADV66713.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus maricopensis DSM 21211] Length = 493 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 111/209 (53%), Gaps = 25/209 (11%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M + Y+++ N+G+ I++ TV ++ +PL + Q +TA M+ +QPK+ E++EK+K PQ Sbjct: 284 MEWLYSVLHNWGLVILVLTVVLRAAIWPLMQTQGKTTARMQLLQPKLKEVQEKYKDD-PQ 342 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 +Q +++Y+ +N+NP AGC + P+ A++ I + E GW+ DL+ D Sbjct: 343 KMQAETMRMYREYNVNP-AGCLSSFIPFPILIALWSTIR-NFEFDSG--LGWLPDLSIPD 398 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P Y+ ++V + L +++ + S P + Q+ I ++F + Sbjct: 399 -----------PLYILAALYVA----VNLLQLYVSTRKS-PEMFRQQSFIY----LIFAY 438 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +FPAG+ +YW S VI +QQ I + Sbjct: 439 FALTFPAGVTLYWIISTVIGTIQQVFINR 467 >gi|251799884|ref|YP_003014615.1| hypothetical protein Pjdr2_5925 [Paenibacillus sp. JDR-2] gi|247547510|gb|ACT04529.1| 60 kDa inner membrane insertion protein [Paenibacillus sp. JDR-2] Length = 272 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 122/239 (51%), Gaps = 39/239 (16%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN--- 391 G+F +++ P L+ + + G+ +G+A+++ T+ V+++ PL +QY MK Sbjct: 41 GFFNHYVVFPFSYLIQHIASFFGDSYGMAVIVMTLLVRIVLLPLMLRQYKGQQGMKQKMS 100 Query: 392 -IQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKV 446 IQP++++L+EK+K+ P+ LQK ++LY H NP+A GC P+L+Q+P+ +Y Sbjct: 101 VIQPELNKLKEKYKEKTPENQAKLQKETMELYSKHQFNPMAIGCLPMLIQMPILTGLYYA 160 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 I ++ E+ F W + L D ILP F+ I+ ++Q + Sbjct: 161 IKMTPELAQHSFL-WFQ-LGTPD--------HILP-----FLAAAIY--------YVQFR 197 Query: 507 MSPPPADKGQ----AMILNWMPVVF-VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D Q AM+ PV+ +F+ S+ PA + +YW I+Q V K++ Sbjct: 198 VSQIGMDSAQQKQMAMLGLLSPVMMGIFSFSA-PAAVPLYWVVGGTFMIIQTLVSKKLY 255 >gi|227510513|ref|ZP_03940562.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190165|gb|EEI70232.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 343 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 121/238 (50%), Gaps = 35/238 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMK 390 +G Y ++A+P +M +VG++G AI++ TV V++ P+ +Q S+ M+ Sbjct: 33 YGLVYDYLARPAQSIMEAIAQIVGSYGWAIVVLTVIVRMFLLPIMVRQMKSSTIQQERMQ 92 Query: 391 NIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++ +L+++ K + Q +AM+ LY+ +NI+ G C P+++Q+P+F A+Y Sbjct: 93 MIRPQMRKLQQRQKAAKTTEEQTAASQAMMALYRQNNISMTGGIGCLPLIIQMPIFTALY 152 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S E+ H F G + + + + L + L G++ Sbjct: 153 AAIRYSPELSHTVFMG----IRLGQSSWLLAVLSFLSYLLQGYL---------------- 192 Query: 505 MKMSPPPADKGQ--AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 M + P A K Q AM+L ++ +F +S+ PAGL IY+ + + + Q +IM ++ Sbjct: 193 MMLGTPKAQKKQMGAMMLMSPIMILLFTISA-PAGLGIYFFIGGLFACL-QTIIMNLY 248 >gi|260584254|ref|ZP_05852001.1| stage III sporulation protein J [Granulicatella elegans ATCC 700633] gi|260157772|gb|EEW92841.1| stage III sporulation protein J [Granulicatella elegans ATCC 700633] Length = 271 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 27/208 (12%) Query: 355 NLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---V 410 ++ GN +G+ I++ T+ +++ P+ QY +T +QP+I++LREK+ Q + Sbjct: 51 HIFGNSYGLGIIVFTIITRIVLVPVMHFQYKTTRQTAILQPEINKLREKYSARDHQTQEI 110 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 L++ + LY+ +N AGC P+ +Q+PV A+Y+ IS + ++ F W +L DP Sbjct: 111 LREEISALYEREGVNQYAGCLPVAIQLPVMIALYQAISRTEALKTGSFL-WF-NLDQPDP 168 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--MILNWMPVVFV 528 F ILP + + W + MKM D G A ++L +P + Sbjct: 169 ------FFILPILVVATTYATSW---------LTMKMQ----DSGAAGKIMLFVLPAMIG 209 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 F +FP+ L +YW N+ ++Q ++ Sbjct: 210 FTALTFPSALSLYWVVGNIFMVIQTLIM 237 >gi|152968449|ref|YP_001364233.1| hypothetical protein Krad_4510 [Kineococcus radiotolerans SRS30216] gi|151362966|gb|ABS05969.1| 60 kDa inner membrane insertion protein [Kineococcus radiotolerans SRS30216] Length = 337 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 33/224 (14%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQ 417 ++I+ V +++L PL KQ + M+ IQP++ +++ K+K + Q +Q+ M+ Sbjct: 42 LSIVGLVVVIRILLIPLFVKQIKAMRGMQVIQPEMRKIQAKYKGKNDPASRQAMQQEMMA 101 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LY+ NP+A C PILLQ P+F A++ + I P D D + T+ Sbjct: 102 LYRESGTNPMASCLPILLQSPIFLALFHTLNGIGKGETVGPL-----DRTLVDQADNATI 156 Query: 477 FG--ILPFYLPGFMHVGIWP---------IIMSLSMFIQMK-----------MSPPPADK 514 FG + ++ + G W ++MSLS F+ K M P + Sbjct: 157 FGSQLSDIFMKSW-STGEWNTIILTAVMIVLMSLSQFVTQKQLMAKNTSSASMEGNPFAQ 215 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q M+L +PV+F + +FP G+++YW +NV S+ QQ +++ Sbjct: 216 QQKMMLYILPVIFAVSGVNFPIGVLLYWLTTNVWSMGQQFFVIR 259 >gi|254384778|ref|ZP_05000115.1| inner membrane protein [Streptomyces sp. Mg1] gi|194343660|gb|EDX24626.1| inner membrane protein [Streptomyces sp. Mg1] Length = 367 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 115/256 (44%), Gaps = 49/256 (19%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTA 387 G F FI P+ ++ F+++ G G++I+ + +++ PL KQ +T Sbjct: 6 GLFSFITTPVSWVIVQFHSVYGAIFGADSGWAWGLSIVSLVILIRICLIPLFVKQIKATR 65 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+ Sbjct: 66 GMQALQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVL 124 Query: 448 SI----------------SLEMRH---APFWGWIKDLA--AADPTNIFTLFGILPFYLPG 486 S S H AP D A AA T I+ Sbjct: 125 SAIANGQTIGVINQSLLESARQAHIFGAPLAAKFTDSAEKAASLNASITDVRIV------ 178 Query: 487 FMHVGIWPIIMSLSMF-IQMKMSPPPAD--------KGQAMILNWMPVVFVFALSSFPAG 537 + ++MSLS F Q ++ D + Q M++ PV+F +FP G Sbjct: 179 ---TAVMIVLMSLSQFYTQRQLMQKNVDLSVKTPFMQQQKMLMYIFPVIFAVMGINFPVG 235 Query: 538 LIIYWSWSNVISIVQQ 553 +++YW +NV ++ QQ Sbjct: 236 VLVYWLTTNVWTMGQQ 251 >gi|260654889|ref|ZP_05860377.1| membrane protein insertase, YidC/Oxa1 family [Jonquetella anthropi E3_33 E1] gi|260630391|gb|EEX48585.1| membrane protein insertase, YidC/Oxa1 family [Jonquetella anthropi E3_33 E1] Length = 261 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 71/249 (28%), Positives = 131/249 (52%), Gaps = 24/249 (9%) Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 +K ++ +S Y++VG++G AI++ T+ ++ + PL KKQ VS M+ +QP+I L+EK Sbjct: 9 SKALYDFLSLIYSVVGSWGWAILILTLIIRAVLHPLNKKQMVSMQKMQKLQPRIKVLQEK 68 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-----------SISL 451 + + L + + LY+ + +NP +GC P+L+Q+P+ +++V+ ISL Sbjct: 69 YAND-RETLGRETMALYRENKVNPASGCLPLLIQLPILILLFQVLRTSSFGGASFFGISL 127 Query: 452 EMRHAPFWGWIKDLAAADPTNI--FTLFGILPFYLPGFMHVGIW------PIIMSLSMFI 503 E A +P+ + F L + G +V IW I++ ++ Sbjct: 128 EGSVYTQLAQATGFAFNNPSELGFFALMSHVFKNPSGLSNVLIWLPNLALVILICYLTWL 187 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ-AVIMKMHGA 562 Q KMS + AM++ +MP++ F S P G+ +YW+ S++++ +QQ V+ K+ Sbjct: 188 QQKMSSAGNQQMGAMLV-FMPILMAFICLSLPGGVALYWAASSLLAAIQQIQVVRKVENE 246 Query: 563 E--IGLIDR 569 E + L DR Sbjct: 247 EKPVLLKDR 255 >gi|220930846|ref|YP_002507755.1| hypothetical protein Ccel_3488 [Clostridium cellulolyticum H10] gi|220001174|gb|ACL77775.1| 60 kDa inner membrane insertion protein [Clostridium cellulolyticum H10] Length = 281 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 72/270 (26%), Positives = 128/270 (47%), Gaps = 51/270 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 F + +P+ + + Y + N+G+A+++ T+ V+ + PL +QY S+A M+ +QP + Sbjct: 2 FDILIRPLGQFLYWIYKTIAFENYGLALIIFTIIVRSIMVPLTLRQYKSSAEMQKVQPLL 61 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E++ K+ + L + M++LY+ H INP GC P+L+Q+P+ A+++ I+ L+ Sbjct: 62 QEIQRKYANDKAK-LNEEMMKLYQEHKINPAGGCLPLLIQMPILLALWQAITKPLKYMLG 120 Query: 457 PFWGWIKDLA---------AADPTNIFTLF---------GILPFYLP--GF-MHVGIWPI 495 + +LA A N T F G L + P GF +++G P Sbjct: 121 FTATQLNNLAVESKIPINSAYSEINTITHFMSRGEGEKVGNLNMFFPSHGFGINLGDIPT 180 Query: 496 --------------------IMSLSMFIQMKMSPPPA---DKGQAMILNWM----PVVFV 528 I +L+ ++ ++MS P + DK + N M P++ + Sbjct: 181 WHFNEIVNNPKNAVLLLLPLIATLTTYLTVRMSMPKSKTTDKAANPMGNSMMYISPIMTL 240 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL +YW NV +I QQ + K Sbjct: 241 IFSFQFPAGLALYWIAGNVFAIAQQYYVNK 270 >gi|268610508|ref|ZP_06144235.1| 60 kDa inner membrane insertion protein [Ruminococcus flavefaciens FD-1] Length = 371 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/276 (24%), Positives = 120/276 (43%), Gaps = 64/276 (23%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G + I P LM Y + N+ ++I++ T+ +LL FP++ S+A M+ + PK+ Sbjct: 3 GLYDIIGVPFGYLMRLIYAIFKNYAVSIIVFTIVTRLLMFPVSYSTQKSSARMQLLNPKL 62 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA----IYKVISISLE 452 ++LR+ F + PQ LQ+ +LY+ +NP+A C P +Q+ + F +YK ++ L+ Sbjct: 63 EKLRKSFANN-PQRLQEEQQKLYQEEGVNPMASCLPTFIQMFLLFGVLDVVYKPLTHILD 121 Query: 453 MRHAPFWGWIKDLAAADPTNI------------------------------------FTL 476 M + + ++A DP+ FT+ Sbjct: 122 MGKSVINSAL-EIAGVDPSKTGLRGELKIMESLAADKGKFASLGSDFVNKVYEFNQKFTI 180 Query: 477 FGILPFYLPGFMHVGIW----------PIIMSLSMFI--------QMKMSPPPADKGQA- 517 FG P +H W P + L+ + Q K++P G Sbjct: 181 FGANLGKTPT-LHPETWNKEAVILAAIPFLAGLAQLLYSFYTQMHQKKVNPSMQQAGGGC 239 Query: 518 --MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++L MP+ ++ +FPAGL YW WS++IS + Sbjct: 240 MNVMLYGMPIFSIWMAFTFPAGLGFYWIWSSLISFI 275 >gi|187777370|ref|ZP_02993843.1| hypothetical protein CLOSPO_00926 [Clostridium sporogenes ATCC 15579] gi|187774298|gb|EDU38100.1| hypothetical protein CLOSPO_00926 [Clostridium sporogenes ATCC 15579] Length = 217 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 22/203 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++GIAI+L T+ ++LL PL KQ S+ M +QP+I +L+ K+K P ++ QK M +L Sbjct: 29 SYGIAIILVTLIIRLLILPLNIKQTKSSLRMNELQPEIKKLQAKYKNDPQRLNQKTM-EL 87 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NPL GC P+L+Q P+F A+Y V + + F W+KDLA D + L G Sbjct: 88 YKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTGINGVSFL-WVKDLAKPDVV-LAVLSG 145 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS-SFPAG 537 ++ M G + GQ +N +F+ +S + Sbjct: 146 ATTYFSGTLMASG------------------DSSQAGQMKSMNIGMSIFMIVISWKLKSA 187 Query: 538 LIIYWSWSNVISIVQQAVIMKMH 560 L++YW +N+I I+Q ++ KM Sbjct: 188 LVLYWVINNLIQIIQTVIMKKME 210 >gi|309811342|ref|ZP_07705129.1| membrane protein insertase, YidC/Oxa1 family [Dermacoccus sp. Ellin185] gi|308434649|gb|EFP58494.1| membrane protein insertase, YidC/Oxa1 family [Dermacoccus sp. Ellin185] Length = 387 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 43/259 (16%) Query: 353 FYNLVG-------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK- 404 ++LVG + ++I + +++L PL KQ ++ M+ +QP++ +++ K+K Sbjct: 22 LFSLVGLPEASGWTWALSIAGLVIVLRILLIPLFVKQIHASRRMQLVQPEMQKIQAKYKG 81 Query: 405 QSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV---ISISLEMRHAPF 458 + P+ Q+ M++LY+T NPL C PILLQ P FFA+++V +S + RH Sbjct: 82 KKDPESRAKQQEEMMELYRTTGTNPLGSCLPILLQAPFFFALFRVLNNLSKIADGRHDEI 141 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP----------IIMSLSMFIQ---- 504 + LA ++ LFG FM W ++MS + FI Sbjct: 142 GFLTRSLAGQAESS--KLFGAK--LSDTFMGTDGWGSAKWVAILLIVLMSATSFITQHQL 197 Query: 505 MKMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ-AVIM 557 M+ + P P K Q +I+ MP+ F + +FP G++IYW +NV ++ QQ VI Sbjct: 198 MRRNMPKAALEGPMAKQQQIIIYLMPIFFAISGVNFPIGVLIYWFVTNVWTMGQQWFVIH 257 Query: 558 KM----HGAEIGLIDRLRS 572 +M AE L +R R+ Sbjct: 258 RMPTPGSAAEKKLEERNRA 276 >gi|257878643|ref|ZP_05658296.1| inner membrane protein [Enterococcus faecium 1,230,933] gi|257881309|ref|ZP_05660962.1| inner membrane protein [Enterococcus faecium 1,231,502] gi|257885584|ref|ZP_05665237.1| inner membrane protein [Enterococcus faecium 1,231,501] gi|257890526|ref|ZP_05670179.1| inner membrane protein [Enterococcus faecium 1,231,410] gi|257893101|ref|ZP_05672754.1| inner membrane protein [Enterococcus faecium 1,231,408] gi|258615273|ref|ZP_05713043.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Enterococcus faecium DO] gi|260558224|ref|ZP_05830420.1| inner membrane protein [Enterococcus faecium C68] gi|261206914|ref|ZP_05921603.1| inner membrane protein [Enterococcus faecium TC 6] gi|289566509|ref|ZP_06446933.1| preprotein translocase YidC subunit [Enterococcus faecium D344SRF] gi|293553544|ref|ZP_06674171.1| membrane protein OxaA 1 [Enterococcus faecium E1039] gi|293563248|ref|ZP_06677700.1| membrane protein OxaA 1 [Enterococcus faecium E1162] gi|293569162|ref|ZP_06680468.1| membrane protein OxaA 1 [Enterococcus faecium E1071] gi|294616662|ref|ZP_06696433.1| membrane protein OxaA 1 [Enterococcus faecium E1636] gi|294619742|ref|ZP_06699147.1| membrane protein OxaA 1 [Enterococcus faecium E1679] gi|294623756|ref|ZP_06702584.1| membrane protein OxaA 1 [Enterococcus faecium U0317] gi|314940134|ref|ZP_07847314.1| putative stage III sporulation protein J [Enterococcus faecium TX0133a04] gi|314943035|ref|ZP_07849839.1| putative stage III sporulation protein J [Enterococcus faecium TX0133C] gi|314948153|ref|ZP_07851549.1| putative stage III sporulation protein J [Enterococcus faecium TX0082] gi|314953433|ref|ZP_07856351.1| putative stage III sporulation protein J [Enterococcus faecium TX0133A] gi|314993828|ref|ZP_07859164.1| putative stage III sporulation protein J [Enterococcus faecium TX0133B] gi|314998147|ref|ZP_07863029.1| putative stage III sporulation protein J [Enterococcus faecium TX0133a01] gi|257812871|gb|EEV41629.1| inner membrane protein [Enterococcus faecium 1,230,933] gi|257816967|gb|EEV44295.1| inner membrane protein [Enterococcus faecium 1,231,502] gi|257821440|gb|EEV48570.1| inner membrane protein [Enterococcus faecium 1,231,501] gi|257826886|gb|EEV53512.1| inner membrane protein [Enterococcus faecium 1,231,410] gi|257829480|gb|EEV56087.1| inner membrane protein [Enterococcus faecium 1,231,408] gi|260075398|gb|EEW63704.1| inner membrane protein [Enterococcus faecium C68] gi|260078542|gb|EEW66244.1| inner membrane protein [Enterococcus faecium TC 6] gi|289161718|gb|EFD09594.1| preprotein translocase YidC subunit [Enterococcus faecium D344SRF] gi|291588131|gb|EFF19973.1| membrane protein OxaA 1 [Enterococcus faecium E1071] gi|291590482|gb|EFF22220.1| membrane protein OxaA 1 [Enterococcus faecium E1636] gi|291594012|gb|EFF25481.1| membrane protein OxaA 1 [Enterococcus faecium E1679] gi|291596710|gb|EFF27933.1| membrane protein OxaA 1 [Enterococcus faecium U0317] gi|291602299|gb|EFF32524.1| membrane protein OxaA 1 [Enterococcus faecium E1039] gi|291604787|gb|EFF34269.1| membrane protein OxaA 1 [Enterococcus faecium E1162] gi|313587859|gb|EFR66704.1| putative stage III sporulation protein J [Enterococcus faecium TX0133a01] gi|313591719|gb|EFR70564.1| putative stage III sporulation protein J [Enterococcus faecium TX0133B] gi|313594536|gb|EFR73381.1| putative stage III sporulation protein J [Enterococcus faecium TX0133A] gi|313598235|gb|EFR77080.1| putative stage III sporulation protein J [Enterococcus faecium TX0133C] gi|313640639|gb|EFS05219.1| putative stage III sporulation protein J [Enterococcus faecium TX0133a04] gi|313645407|gb|EFS09987.1| putative stage III sporulation protein J [Enterococcus faecium TX0082] Length = 272 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 27/205 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV---LQKA 414 GN GI I+L T+ ++++ PL Q S + +QPK+ L++++ P+ L++ Sbjct: 54 GNAGIGIILFTLIIRVILLPLMHFQTKSMRKTQELQPKLKALQQQYSSRDPETQSKLREE 113 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY + +NP AGC P+L+Q+P+ A+++ IS E++ F W+ +L ADPT I Sbjct: 114 QQRLYAENGVNPYAGCLPLLVQMPILMALWQSISRVPELKQGHFL-WL-NLGNADPTFIL 171 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--MILNW-MPVVFVFAL 531 PI+ ++ F +S + A I+N+ MPV+ + Sbjct: 172 -------------------PILAAIFTFASTYLSSMSQIESNASMKIMNFVMPVMILVMG 212 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 + +GL +YW SN +VQ +I Sbjct: 213 VNLASGLSLYWVVSNAFQVVQTLLI 237 >gi|329944746|ref|ZP_08292825.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral taxon 170 str. F0386] gi|328529882|gb|EGF56772.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral taxon 170 str. F0386] Length = 403 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 28/219 (12%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQVLQK---AMIQ 417 ++I+ T+ V+LL PL KQ ++ M+ +QP++ L+ K+K + P+ Q+ M+ Sbjct: 38 LSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPEMKALQAKYKGKKDPESRQRMNEEMMA 97 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW--IKDLAA--ADPTNI 473 LY+ H NP+A C PIL+Q+P+FFA+++V++ SL +G I L A+ Sbjct: 98 LYRKHGTNPMASCLPILVQMPIFFALFRVLA-SLGAVAGGTYGRPSIGPLTQQLAEQVQA 156 Query: 474 FTLFG----------------ILPFYLPGFMHVGIWPIIMSLS---MFIQMKMSPPPADK 514 ++FG I+ + M V W + L+ M + S P + Sbjct: 157 SSVFGASLSSSFMSSADTQVKIVTVAMIIIMSVTQWYTMAQLTMKNMSAESMDSDNPMIR 216 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 Q M++ MPV+F + +F G+++YW SN+ ++ QQ Sbjct: 217 SQRMMMYVMPVIFAISGVNFQIGVLVYWVISNLWTMGQQ 255 >gi|226229338|ref|YP_002763444.1| inner membrane protein OxaA [Gemmatimonas aurantiaca T-27] gi|226092529|dbj|BAH40974.1| inner membrane protein OxaA [Gemmatimonas aurantiaca T-27] Length = 570 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 23/233 (9%) Query: 250 SWLGISDKYWA-SVFIPSKETSF-HSQFKYLSDGHARYQAKFSANEIT-ILPGKSITTTN 306 +W +KY+ V P T F + F G R + E T ++P K+ Sbjct: 267 TWAVAKNKYFMLGVLTPKGGTPFLEANFT----GGPRVAKAATRGEATLVMPLKAGNVAF 322 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG-WFYFIAKP----MFMLMSYFYNLVG-NF 360 + G +EF + ++ FE +G W I +P + L+ + +G ++ Sbjct: 323 EAYVGPQEFKRLVAMGRE-----FETSNPYGGWIQGIVQPFATMVITLLLWMKKTLGVSY 377 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G +++ V V+++ +PL ++ S+ M+ IQP++ ++ + K P Q LQ AM+Q+YK Sbjct: 378 GWILVIFGVAVRIILWPLNQRAMRSSMQMQRIQPELQAIQARHKGDP-QKLQAAMMQVYK 436 Query: 421 THNINP---LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 H ++P L+GC P+L+ +PVFFA++ V ++E R F W D++ DP Sbjct: 437 EHGMSPFSSLSGCLPMLIPLPVFFALFFVFQNTIEFRGVSFL-WFPDISVKDP 488 >gi|56965671|ref|YP_177405.1| stage III sporulation protein J [Bacillus clausii KSM-K16] gi|56911917|dbj|BAD66444.1| stage III sporulation protein J [Bacillus clausii KSM-K16] Length = 265 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 77/231 (33%), Positives = 117/231 (50%), Gaps = 37/231 (16%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W F PM L+++F +L G+FG I++ T+ ++LL PLA K ST M+ ++P++ Sbjct: 36 WNSFFVYPMSFLITFFSDLTGGHFGWGIIIVTILIRLLILPLALKSQKSTRAMQVLRPEM 95 Query: 397 DELREKFK--QSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 E++EK K Q P+ +Q M+ LY+ H +NP AGC P L+QIP+ A+Y I + Sbjct: 96 QEIQEKMKKAQGNPEKQREVQAEMLSLYQKHGVNPAAGCLPALVQIPIVMALYFAIMRTE 155 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGI-LPFYLPGFMHVGIWPIIMSLSMFIQMKMS-- 508 E+ P + F F + P Y I P+I ++ F+Q KMS Sbjct: 156 EI-------------GVGPASAFLWFNLGSPDY--------ILPVIAGITTFVQFKMSMS 194 Query: 509 -PPPADKGQAM------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P G+ M +L MPV+ V A + P+ L +YW N+ IVQ Sbjct: 195 QMPANPLGEGMPNPMNIMLYIMPVMIVIAGITLPSALALYWVVGNLFMIVQ 245 >gi|331702707|ref|YP_004399666.1| membrane protein oxaA [Lactobacillus buchneri NRRL B-30929] gi|329130050|gb|AEB74603.1| Membrane protein oxaA [Lactobacillus buchneri NRRL B-30929] Length = 278 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 23/223 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW + +S F++ N+G+ I++ T+ V+++ PL Q S + +QP++ Sbjct: 39 GWVVLNFSRAIIWLSKFFS--DNYGMGIIIFTILVRIVILPLMIYQTRSMRKTQEVQPQL 96 Query: 397 DELREKFKQSPPQVLQKAMIQ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + +QK + LY INPLAGC P+++Q+P+ FA+Y+ I + + Sbjct: 97 KALQKKYSSRDAETVQKLQAEQKKLYAEAGINPLAGCLPLIVQMPILFALYQAIWRTHIL 156 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R F+ W++ L DP + +LP F + W L+M Q P ++ Sbjct: 157 RSGTFF-WLQ-LGHPDP------YFVLPILAALFTFISSW-----LAMKGQ-----PESN 198 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M+ MP + S P+ L +YW +N + Q VI Sbjct: 199 SMTTMMTVGMPFFILIMAISLPSALSLYWVITNAFQVGQTLVI 241 >gi|329938642|ref|ZP_08288038.1| Inner membrane protein translocase component YidC, long form [Streptomyces griseoaurantiacus M045] gi|329302133|gb|EGG46025.1| Inner membrane protein translocase component YidC, long form [Streptomyces griseoaurantiacus M045] Length = 443 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 37/255 (14%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTA 387 G+F FI P+ ++ F+ + G G++I+ + +++ PL KQ +T Sbjct: 6 GFFSFITTPVSWVIVQFHTVYGAIFGADTGWAWGLSIVSLVILIRICLIPLFVKQIKATR 65 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+ Sbjct: 66 AMQTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVL 124 Query: 448 SISLEMRHAPFWGWIKD--LAAADPTNIFTL------------FGILPFYLPGFMHV-GI 492 + + G I D LA+A +IF L L V + Sbjct: 125 N---GIATGKTIGVINDDLLASARKAHIFGAPLAAKFMDSSDKVEALGATLTDVRVVTAV 181 Query: 493 WPIIMSLSMF-IQMKMSPPPAD--------KGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 ++MS S F Q ++ D + Q M++ PV+F +FP G+++YW Sbjct: 182 MIVLMSFSQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWL 241 Query: 544 WSNVISIVQQAVIMK 558 +NV ++ QQ +++ Sbjct: 242 TTNVWTMGQQMYVIR 256 >gi|52786308|ref|YP_092137.1| OxaA-like protein precursor [Bacillus licheniformis ATCC 14580] gi|319645111|ref|ZP_07999344.1| YqjG protein [Bacillus sp. BT1B_CT2] gi|52348810|gb|AAU41444.1| YqjG [Bacillus licheniformis ATCC 14580] gi|317392920|gb|EFV73714.1| YqjG protein [Bacillus sp. BT1B_CT2] Length = 274 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 22/212 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQV--- 410 GN+G++I+ T+ V++L FPL KKQ M ++P++D ++ + K++ V Sbjct: 61 GNYGLSIIFVTIIVRVLVFPLFANQYKKQRAMQEKMALVKPELDAIQSRLKKTKDPVKQR 120 Query: 411 -LQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +Q+ M+QLY+ HNINPLA GC P+L+Q P+ Y I + E+ F W +L + Sbjct: 121 EIQQEMMQLYQKHNINPLAMGCLPMLIQFPILIGFYYAIRSTPEIASHSFL-WF-NLGHS 178 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 D I+ GFM+ + + L+ Q S P A + ++ + PV+ Sbjct: 179 D---------IIVSLSAGFMYFIQFYVSQKLNA--QNAQSNPAAQQSAKIMGFFFPVMMT 227 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + PA L +YW S ++ +Q V+ +++ Sbjct: 228 IFSINVPAALPLYWLTSGLLLTIQSVVLHQVY 259 >gi|52080933|ref|YP_079724.1| OxaA-like protein [Bacillus licheniformis ATCC 14580] gi|52004144|gb|AAU24086.1| translocase for membrane proteins OxaA2 [Bacillus licheniformis ATCC 14580] Length = 273 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 22/212 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQV--- 410 GN+G++I+ T+ V++L FPL KKQ M ++P++D ++ + K++ V Sbjct: 60 GNYGLSIIFVTIIVRVLVFPLFANQYKKQRAMQEKMALVKPELDAIQSRLKKTKDPVKQR 119 Query: 411 -LQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +Q+ M+QLY+ HNINPLA GC P+L+Q P+ Y I + E+ F W +L + Sbjct: 120 EIQQEMMQLYQKHNINPLAMGCLPMLIQFPILIGFYYAIRSTPEIASHSFL-WF-NLGHS 177 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 D I+ GFM+ + + L+ Q S P A + ++ + PV+ Sbjct: 178 D---------IIVSLSAGFMYFIQFYVSQKLNA--QNAQSNPAAQQSAKIMGFFFPVMMT 226 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + PA L +YW S ++ +Q V+ +++ Sbjct: 227 IFSINVPAALPLYWLTSGLLLTIQSVVLHQVY 258 >gi|15807143|ref|NP_295872.1| inner membrane protein, 60 kDa [Deinococcus radiodurans R1] gi|38503229|sp|Q9RSH5|OXAA_DEIRA RecName: Full=Membrane protein oxaA gi|6459947|gb|AAF11697.1|AE002049_2 inner membrane protein, 60 kDa, putative [Deinococcus radiodurans R1] Length = 428 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 70/243 (28%), Positives = 124/243 (51%), Gaps = 32/243 (13%) Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 T++ ++ G E IH Y+ L +F I+ + LM Y ++GN+G+ Sbjct: 160 TSSLEVYGGKNEL--IHLYQSGYT--ELPGLFQPNFFGQISLLIVKLMEALYKVIGNWGL 215 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQ---VLQKAMIQL 418 IM T+ ++L+ +PL + Q +TA M+ +QP E++EK+K ++ P+ +Q M QL Sbjct: 216 VIMALTILLRLVMWPLMQAQGRTTARMQLVQPLQKEIQEKYKGKTDPESQRAMQMEMAQL 275 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 + + +NP AGC+ LL PV A++ I + E + W+ DLA DP I + Sbjct: 276 MRDYQVNP-AGCFSTLLPFPVLIALWATIR-NFEFDSG--FLWLPDLATPDPFYILAV-- 329 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 YL F+++G +++ + + P + QAMI +VF++ +FP+G+ Sbjct: 330 ---IYL--FVNLG--------QLYVSTRKT-PEMFRQQAMIY----LVFLYFALTFPSGV 371 Query: 539 IIY 541 +Y Sbjct: 372 TLY 374 >gi|281420428|ref|ZP_06251427.1| inner membrane protein OxaA [Prevotella copri DSM 18205] gi|281405573|gb|EFB36253.1| inner membrane protein OxaA [Prevotella copri DSM 18205] Length = 645 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 129/568 (22%), Positives = 251/568 (44%), Gaps = 77/568 (13%) Query: 32 EMNNERKNIQTVKQPNQVDNSYAAVLIDDRA---QAL-SMSPRVELKNPSLIGSINLKGA 87 EM K+ +Q N + A V D A AL + ++ LKN + ++N KGA Sbjct: 46 EMEKASKSAAAKRQTN----AKAKVEADSTALFYSALKGQAKKIVLKNEKVELTLNTKGA 101 Query: 88 QFDDLNLRGY--H----LDVSSNSPIVTLLSPSNTKNAYFAELDYVS--TANNIELPNSN 139 + ++GY H D S+++ VTL ++ + E + T++ P++ Sbjct: 102 TVEKAVIKGYVGHNLQVKDGSADAKDVTLFDGNDQSLKFMLEAKEANIITSDLYFTPSNV 161 Query: 140 TVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS----IDQIR 195 T ++ + + L + ++ + +SL + + + N D+ R Sbjct: 162 TDKSVTMTAVAGEGKTLTLTYTLGDDYMLH--MSLQANGMADLFSPNYNKMDVDWSDKAR 219 Query: 196 FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGIS 255 RG + ++ T T + EG L + S E+ IE E+ W+ Sbjct: 220 QQERGFMFENRYTTLT--YHNAEGGTDHLNEGS--EKIDEKIE--------ETIDWVSFK 267 Query: 256 DKYWASVFIPS---KETSFHSQFKYLSDGHARYQAKFSANEITILP--GKSITTTNFLFA 310 +++++++ + ++ +F + + + Y +F A T GK + F F Sbjct: 268 NQFFSAIIVAKDNFEKDAFMTSIP--QEKGSGYLKQFQAKMKTAFDPTGKKASEFEFYF- 324 Query: 311 GAKEFPTIHHYEKDLAIPR---FEMLIDWGWFYFIAKPMFMLMSYFYNL--------VGN 359 G +F + + EK+ + F+ L+ GW P+ ++ F+ L V Sbjct: 325 GPNDFQILKNTEKESTFGKDLEFQKLVYLGW------PIIRWINRFFTLYVFDWLSNVFP 378 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL-QKAMIQL 418 GI ++L T+ +KL+ +P+ KK Y+S+A M+ ++PK++ ++ + Q+ Q+AM+ Sbjct: 379 MGIVLILITLLLKLITYPMVKKSYMSSAKMRVLKPKLEAATAQYNKPEDQMQKQQAMMAE 438 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP-----TNI 473 Y + ++PL+GC P+L+Q+PV+ A++ + ++++R F W+ DL+ DP TNI Sbjct: 439 YAKYGVSPLSGCLPMLIQMPVWIAMFNFVPNAIQLRGEKFL-WMNDLSTFDPIFEWNTNI 497 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW----MPVVFVF 529 + + L F + M++ Q + Q ++ W MP++F F Sbjct: 498 WLIGDHLSLTCILFCVANLLYSWMTMR---QQRDQMVGQQAEQMKMMQWMMYLMPLMFFF 554 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + AGL Y+ IS+ A IM Sbjct: 555 MFNDYSAGLNFYY----FISLFFSAAIM 578 >gi|28209867|ref|NP_780811.1| putative inner membrane protein translocase component YidC [Clostridium tetani E88] gi|38502981|sp|Q899S4|OXAA_CLOTE RecName: Full=Membrane protein oxaA gi|28202302|gb|AAO34748.1| conserved membrane protein [Clostridium tetani E88] Length = 220 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 27/206 (13%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G+AI+ T+ +KL+ PL K ST + IQP+I ++++K+K + PQ LQ+ ++L Sbjct: 29 SYGVAIIFVTLIIKLILLPLNIKSMRSTIRINEIQPEIQKIQKKYK-NDPQRLQQEQMKL 87 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NINP C P+LLQ P+ A+Y V + + F W+KDLA+ D + L G Sbjct: 88 YKEYNINPFGSCLPLLLQWPILIALYYVFNNIQGISGVSFL-WVKDLASPDIV-LAVLAG 145 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN----WMPVVFVFALSSF 534 +Y M+ P D QA + M ++ +F S Sbjct: 146 ATQYYSGLLMN--------------------PKGDNTQAKTASNMNLSMSIMMIFISSRL 185 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMH 560 A L+IYW N+I + Q + K+ Sbjct: 186 KAALVIYWVTGNLIQMGQTILTKKLE 211 >gi|295101866|emb|CBK99411.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Faecalibacterium prausnitzii L2-6] Length = 361 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 52/280 (18%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D Y + P+ +M + YNL+ N+G I++ T+ ++LL PL Q S A M QP Sbjct: 4 DMNILYILGVPLGYVMEWIYNLIPNYGWDIIIFTIVIRLLSIPLQLNQQKSMAKMSAFQP 63 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI------- 447 I ++++K+K P + Q+ +++L + P AGC P+L+ V F + +V+ Sbjct: 64 MIADIQKKYKDKPEK-QQEELMKLQQEFGYKPTAGCMPMLVNFLVMFGVIEVVYRPLQRI 122 Query: 448 -SISLEMRHAP----------FWGWIKDL--------AAADPTNIFT------------- 475 I E A F +D + T++FT Sbjct: 123 FHIGAEAITAAGDAMTALGISFTQVTRDTNIIAQVLAGESTVTSVFTPDQLNTITEFGQH 182 Query: 476 --LFGILPFYLPGF------MHVGIWPIIMSLSMF----IQMKMSPPPADKGQAMILNWM 523 FGI +P + + + I+PI+ ++MF I MK S + + M Sbjct: 183 MDFFGIDLTRVPQYSLAADNLPLLIFPILAVVTMFISTHISMKASGQEMQGSMKLTMYMM 242 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+++VF + P +Y+ SN++ VQ V+ K++ E Sbjct: 243 PLMYVFFCFTVPCAFSLYYVISNIVMTVQTQVMRKIYDPE 282 >gi|332672290|ref|YP_004455298.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas fimi ATCC 484] gi|332341328|gb|AEE47911.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas fimi ATCC 484] Length = 371 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 74/268 (27%), Positives = 126/268 (47%), Gaps = 67/268 (25%) Query: 338 WFYFIAKPMFMLMSY----FYNLVGNFGI----------AIMLTTVFVKLLFFPLAKKQY 383 WF + P+ ++++ F+ L G+ +I+ V +++L PL KQ Sbjct: 3 WFDGLLAPIMTVVAWIMVQFHALFTTLGLNPESGAAWALSIVGLVVVIRILLIPLFFKQI 62 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGCWPILLQIPV 439 ++ M+ + P++ +++K+K ++AM ++LY+ H NP A C PILLQ P+ Sbjct: 63 KASRGMQMLAPEMQAIQKKYKGKTDPASREAMSRETMELYRKHGTNPFASCLPILLQSPI 122 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI-------------FTLFGILPFYLPG 486 FFA+++V+ + +AA D I T+FG L G Sbjct: 123 FFALFRVLY------------QLPQIAAGDIKPIGPMSAELAAQAEAATIFGA---PLSG 167 Query: 487 -FMHVG----------IWPIIMSLSMF-----IQMKMSPPPADKG-----QAMILNWMPV 525 FM G + I MS + F + MK PP A +G Q ++L +P+ Sbjct: 168 TFMQAGDNWHIRVVTVVLIIAMSATTFLTQRQLTMKNMPPAALQGPMAQQQKVLLYVLPL 227 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQ 553 VF F+ +FP G++IYW+ +N+ S+ QQ Sbjct: 228 VFAFSGVNFPIGVLIYWTTTNLWSMGQQ 255 >gi|125974852|ref|YP_001038762.1| protein translocase subunit yidC [Clostridium thermocellum ATCC 27405] gi|256003891|ref|ZP_05428878.1| 60 kDa inner membrane insertion protein [Clostridium thermocellum DSM 2360] gi|281418693|ref|ZP_06249712.1| membrane protein insertase, YidC/Oxa1 family [Clostridium thermocellum JW20] gi|125715077|gb|ABN53569.1| protein translocase subunit yidC [Clostridium thermocellum ATCC 27405] gi|255992229|gb|EEU02324.1| 60 kDa inner membrane insertion protein [Clostridium thermocellum DSM 2360] gi|281407777|gb|EFB38036.1| membrane protein insertase, YidC/Oxa1 family [Clostridium thermocellum JW20] gi|316941974|gb|ADU76008.1| membrane protein insertase, YidC/Oxa1 family [Clostridium thermocellum DSM 1313] Length = 291 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 39/90 (43%), Positives = 62/90 (68%), Gaps = 1/90 (1%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G++G+AI+L TVF+KLL PL+ KQY S+ M+ +QP I E++ K+K + PQ + ++ Sbjct: 22 GSYGLAIILFTVFIKLLLLPLSIKQYKSSLKMQEMQPLIQEIQRKYK-NDPQKQSEELMN 80 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 LYK HN +P +GC +Q+P+ ++Y VI Sbjct: 81 LYKEHNFSPASGCLTSFIQLPIIVSLYYVI 110 >gi|331701545|ref|YP_004398504.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus buchneri NRRL B-30929] gi|329128888|gb|AEB73441.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus buchneri NRRL B-30929] Length = 343 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 34/234 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY----VSTANMK 390 +G Y ++A+P +M + VG++G AI++ TV V+L P+ +Q + M+ Sbjct: 33 YGAVYDYLARPAQAIMEWIAQFVGSYGWAIIVLTVVVRLFLLPIMVRQMKASTIQQEKMQ 92 Query: 391 NIQPKIDEL--REKFKQSPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++ EL R+K +P + +AM+ LYK + I+ G C P+L+Q+P+F A+Y Sbjct: 93 LIRPQMAELQKRQKAASTPEEQTAASQAMMALYKQNGISMTGGIGCLPLLIQMPIFTALY 152 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S E+ H F G + + + + + L G++ + Sbjct: 153 AAIRYSPELSHTVFMG----IRLGQSSWLLAVLSFASYLLQGYIAM-------------- 194 Query: 505 MKMSPPPADKGQ--AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + P A K Q AM+L ++ VF LS+ PAGL IY+ + + +Q +I Sbjct: 195 --LGTPAAQKKQMGAMMLLSPIMILVFTLSA-PAGLGIYFFIGGLFACLQTLII 245 >gi|308234064|ref|ZP_07664801.1| membrane protein insertase, YidC/Oxa1 family [Atopobium vaginae DSM 15829] gi|328943461|ref|ZP_08240926.1| inner membrane protein OxaA [Atopobium vaginae DSM 15829] gi|327491430|gb|EGF23204.1| inner membrane protein OxaA [Atopobium vaginae DSM 15829] Length = 252 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 68/113 (60%), Gaps = 4/113 (3%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W WF I + L+ +L G++G+A+++ T+ +++L PL K S+A M+ +QPK Sbjct: 2 WDWFIGILTQILELLQ---SLCGDWGLAVIILTLIIRVLLIPLMTKSTESSAQMQVLQPK 58 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 + E+++K+ P + + + M + Y H N L GC P LLQ+P+FF ++ V S Sbjct: 59 MQEIKDKYADDPAR-MNEEMQKFYSEHKFNMLGGCLPTLLQMPIFFGLFTVAS 110 >gi|294813736|ref|ZP_06772379.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] gi|326442157|ref|ZP_08216891.1| putative inner membrane protein translocase component YidC [Streptomyces clavuligerus ATCC 27064] gi|294326335|gb|EFG07978.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 415 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 37/252 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ L G G++I+ V +++ PL KQ S NM Sbjct: 8 FSFITTPVSWIIVQFHKLYGAMFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSMRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QALQPKMKAIQERYKNDR-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYYVLS- 125 Query: 450 SLEMRHAPFWGWIKD--LAAADPTNIF------------TLFGILPFYLPGFMHV-GIWP 494 + G I + L +A +IF L L V + Sbjct: 126 --NIASGKTVGVINESLLESARQAHIFGAPLAAKFMDSEAKVASLDASLTTVRIVTAVMI 183 Query: 495 IIMSLSMFIQMKM---------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MS S F + P + Q M++ PV+F +FP G+++YW + Sbjct: 184 VLMSASQFYTQRQLMQKNVDLSVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTT 243 Query: 546 NVISIVQQAVIM 557 NV ++ QQ ++ Sbjct: 244 NVWTMGQQMYVI 255 >gi|217077890|ref|YP_002335608.1| inner membrane protein OxaA [Thermosipho africanus TCF52B] gi|217037745|gb|ACJ76267.1| inner membrane protein OxaA [Thermosipho africanus TCF52B] Length = 434 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 26/227 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GWF FI P+ + + NFG+ I++ T+ V+ + +PL Q S M+ +QP + Sbjct: 214 GWFDFILYPLVYFFGWINDFTRNFGLTIIVFTIIVRFVLYPLYHSQTKSMIKMRKLQPIV 273 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MR 454 +++++K+K PQ Q+ +++ Y+ + INP +GC +Q+P+F +Y+VI E Sbjct: 274 EQIKKKYKD--PQKQQQELLKAYRENKINPASGCLMAFVQLPIFIILYQVIRYYQEEFAF 331 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS-MFIQMKMSPPPAD 513 F W DL A GF I+ +I ++ ++ + S Sbjct: 332 SGRFLFW-NDLTAG-----------------GFSANWIFLVIQIVAGYYLALITSQDSRT 373 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 Q++I M +F F P+G+ +Y++ + +I + I K + Sbjct: 374 AWQSII---MSFIFPFLFIGLPSGVFLYYTANTLIQLGITYYIYKRY 417 >gi|300857413|ref|YP_003782397.1| putative membrane protein OxaA [Clostridium ljungdahlii DSM 13528] gi|300437528|gb|ADK17295.1| predicted membrane protein OxaA [Clostridium ljungdahlii DSM 13528] Length = 218 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 24/182 (13%) Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 KQ S+ M IQP++ +L+EK+K+ PQ Q+ M++LYK +P +GC P+L+Q P+ Sbjct: 51 KQARSSLIMNEIQPEVKKLQEKYKKD-PQKAQQEMMKLYKEKGASPFSGCLPLLIQWPIL 109 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF--TLFGILPFYLPGFMHVGIWPIIMS 498 A+Y V + +L + + WI DLA D IF L G+ F Sbjct: 110 IALYYVFN-NLSGINGVSFLWIGDLAKTD---IFLAILSGVTTF---------------- 149 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 LS ++ M + A + + M + M V VF F A L++YW SN+I I Q V+ K Sbjct: 150 LSGYLMMSGNSEQAKQAKTMNIA-MSAVMVFMSIKFKAALVLYWVVSNLIQIAQTVVLKK 208 Query: 559 MH 560 + Sbjct: 209 IE 210 >gi|148927718|ref|ZP_01811160.1| 60 kDa inner membrane insertion protein [candidate division TM7 genomosp. GTL1] gi|147886931|gb|EDK72459.1| 60 kDa inner membrane insertion protein [candidate division TM7 genomosp. GTL1] Length = 320 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 43/259 (16%) Query: 341 FIAKPMFMLMSYFYNLV-GN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 I +P+F ++ Y ++ GN FG+A+++ T+ V+ +PL KKQ T M+ IQP++ + Sbjct: 4 LIVQPIFNVLLAIYGIIPGNDFGVALIIFTILVRFAMWPLLKKQLHQTRLMRQIQPELKK 63 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH--- 455 ++ + K + + + M++LY+ + P + +L+Q+P+F A+++VI I RH Sbjct: 64 VKARAKGN-KMLESQMMMELYRERGVRPFSSIGLLLIQLPIFIALFRVIQILTSQRHDIS 122 Query: 456 ------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW------PIIMSLSMFI 503 G I++L A LFG++ G++ I+ ++ +I Sbjct: 123 RYTYDFMQNLGAIRELVAHPDKFNEMLFGVINLTQHAVTSQGVYVPLLLLAILAAVLQYI 182 Query: 504 QMKMSPPPAD-------------KGQAM------------ILNWMPVVFVFALSSFPAGL 538 Q K P D KG+A+ ++ +P V F P L Sbjct: 183 QSKQVLPQQDSKKKLRDILKDSSKGKAVDQSEVTAIMSGRMIMLLPAVLFFIGLYLPGAL 242 Query: 539 IIYWSWSNVISIVQQAVIM 557 ++Y++ S++++I QQ V++ Sbjct: 243 VLYYAVSSLVAIAQQRVVL 261 >gi|119718914|ref|YP_925879.1| putative inner membrane protein translocase component YidC [Nocardioides sp. JS614] gi|119539575|gb|ABL84192.1| 60 kDa inner membrane insertion protein [Nocardioides sp. JS614] Length = 363 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 30/228 (13%) Query: 355 NLVGNFGI----AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 L G+ G+ +I+ T+ V+ L PL KQ S+ NM+ IQPK+ EL++K+ ++ Sbjct: 34 GLDGDSGLVWVLSIIGLTLTVRALLIPLFVKQIKSSRNMQLIQPKVKELQKKYGHDRERL 93 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW----IKDLA 466 Q+ M +LYK NP A C P+++Q+P+F A+++++ +HA KDLA Sbjct: 94 AQETM-KLYKDSGTNPFASCLPLIIQMPIFLALFRLLD-----KHAARGDGKAFITKDLA 147 Query: 467 AA-DPTNIFTLFGILPFYL-PGFMHVGIWPIIMSLSMF---------IQMKMSPPPADKG 515 + ++F++ F G V + I+ L+M + K PP A G Sbjct: 148 ESFQSADLFSVPLKATFLRNDGSTAVMVVAAILVLAMTATTFTTQRQLMSKNMPPDALSG 207 Query: 516 -----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q ++L +PVVF +FP ++ YW+ SN+ ++ QQ +++ Sbjct: 208 PYAQQQKLLLYVLPVVFAVGGIAFPVAVLFYWTTSNLWTMGQQFYVIR 255 >gi|297200935|ref|ZP_06918332.1| membrane protein [Streptomyces sviceus ATCC 29083] gi|197716893|gb|EDY60927.1| membrane protein [Streptomyces sviceus ATCC 29083] Length = 428 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 35/247 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G G++I+ + +++ PL KQ ST M Sbjct: 8 FSFITTPVSWVIVQFHTVYGKIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKSTRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-- 447 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNG 126 Query: 448 ------------SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 S+ R A +G LAA T+ + + + + Sbjct: 127 IATGDTIGVINESLLASARKAHIFG--APLAAKFKDGSATVQALGATVTDVRVVTAVMIV 184 Query: 496 IMSLSMF-IQMKMSPPPAD--------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 +MS S F Q ++ D + Q M++ PV+F +FP G+++YW +N Sbjct: 185 MMSASQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTN 244 Query: 547 VISIVQQ 553 V ++ QQ Sbjct: 245 VWTMGQQ 251 >gi|325845290|ref|ZP_08168594.1| putative stage III sporulation protein J [Turicibacter sp. HGF1] gi|325488731|gb|EGC91136.1| putative stage III sporulation protein J [Turicibacter sp. HGF1] Length = 263 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 37/227 (16%) Query: 345 PMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+ +++ YNL+ N G+AI+L T V+L+ PL K ++A M+ IQP++ +++K+ Sbjct: 44 PLATFITFLYNLLNQNLGLAIILATAIVRLVLMPLYLKSNKTSAIMQEIQPEMQRIQKKY 103 Query: 404 KQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 + Q +Q M+ LYK +N NP+ GC LQ+PVF A Y+ IS RH Sbjct: 104 ENKTDQASQVKMQTEMMDLYKKYNFNPMMGCILPFLQMPVFLAFYQAIS-----RHP--- 155 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW---PIIMSLSMFIQ-------MKMSP 509 IKD AA++ L L + + W I+ LS++ Q M S Sbjct: 156 -LIKDAAASE---------FLGVNLGATVQLANWILALIVAGLSIYSQRLMNKSMMTNSS 205 Query: 510 PPADKGQAMILNWMPVVFVFALSSF----PAGLIIYWSWSNVISIVQ 552 +K M++ M FA+ S P +Y+ +V+ I+Q Sbjct: 206 AQQNKTSNMMMKVMTYYMTFAMFSITIATPFAFGLYFLTGSVMQIIQ 252 >gi|260592831|ref|ZP_05858289.1| inner membrane protein OxaA [Prevotella veroralis F0319] gi|260535201|gb|EEX17818.1| inner membrane protein OxaA [Prevotella veroralis F0319] Length = 641 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 86/329 (26%), Positives = 170/329 (51%), Gaps = 33/329 (10%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKY--LSDGHARYQAKFSAN-EITILP-GKSITTT 305 W+ ++++++V I + +Q K L G +Y +++AN + P GK + Sbjct: 260 DWVAFKNQFFSAVMIAKDNFATGAQLKSTPLEKG-TKYLKQYAANMKAGFDPTGKKASEF 318 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL--------V 357 F F G +F + EK+ RF +D ++ P+F +++ ++ L V Sbjct: 319 EFYF-GPNDFRLLQSVEKE---SRFGKDLDMQRLVYLGWPLFRIINRWFTLYVFDWLSKV 374 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMI 416 G+ ++L T+ +KL+ +P+ KK Y+S+A M+ ++PK+DE ++F K Q+AM+ Sbjct: 375 FPMGVVLILITLLLKLITYPMVKKSYMSSAKMRVLKPKLDEATKQFNKPEDQMQKQQAMM 434 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP-----T 471 Q Y + ++PL+GC P+L+Q+P++ A++ + ++++R F W+KDL+ DP + Sbjct: 435 QKYAEYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGESFL-WMKDLSTYDPILSWNS 493 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM-KMSPPPADKGQAM--ILNWMPVVFV 528 +++ + L L + G + +M Q +M AD+ + M ++ MP+ F Sbjct: 494 DLWLIGDHLS--LTCILFCGANLLYSWFTMQQQKDQMVGQQADQMKMMQYMMFAMPLFFF 551 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIM 557 F +++ +GL Y+ +S+ A IM Sbjct: 552 FMFNNYSSGLNFYY----FVSLFFSAAIM 576 >gi|293376114|ref|ZP_06622364.1| putative stage III sporulation protein J [Turicibacter sanguinis PC909] gi|292645268|gb|EFF63328.1| putative stage III sporulation protein J [Turicibacter sanguinis PC909] Length = 263 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 14/130 (10%) Query: 345 PMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+ +++ YNL+ N G+AI+L T V+L+ PL K ++A M+ IQP++ ++++K+ Sbjct: 44 PLATFITFLYNLLNQNLGLAIILATAIVRLVLMPLYLKSNKTSAIMQEIQPEMQQIQKKY 103 Query: 404 KQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 + Q +Q M+ LYK +N NP+ GC LQ+PVF A Y+ IS RH Sbjct: 104 ENKTDQASQVKMQTEMMDLYKKYNFNPMMGCILPFLQMPVFLAFYQAIS-----RHP--- 155 Query: 460 GWIKDLAAAD 469 IKD AA++ Sbjct: 156 -LIKDAAASE 164 >gi|220910606|ref|YP_002485917.1| inner membrane protein translocase component YidC [Cyanothece sp. PCC 7425] gi|219867217|gb|ACL47556.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 7425] Length = 396 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 77/129 (59%), Gaps = 12/129 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++L +PL+ + MK +Q Sbjct: 1 MDFGIGFLSDNVMLPILDFFYGIVPSYGLAIVALTLVIRLALYPLSAGSIRNMRQMKIVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P K+ E++EK+K P Q+AM ++YK NPLAGC+P+LLQ+P+ FA++ Sbjct: 61 PMMQKKVKEIQEKYKNDPTGQ-QQAMSEVYKEFG-NPLAGCFPLLLQMPILFALFAT--- 115 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 116 ---LRGSPF 121 >gi|163791581|ref|ZP_02185983.1| Membrane protein chaperone oxaA [Carnobacterium sp. AT7] gi|159873159|gb|EDP67261.1| Membrane protein chaperone oxaA [Carnobacterium sp. AT7] Length = 275 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 27/205 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV---LQKA 414 G++G+ I++ T+ ++L+ P+ Q ST M +QP++ EL+ K+ L++ Sbjct: 57 GSYGVGIIIFTLIIRLILLPVMHGQTKSTRKMAELQPQLKELQTKYASKDTDTQNKLKEE 116 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY +NP+AGC P+L+Q+PV A+Y+ IS + ++ F W+ +L A DP Sbjct: 117 TSKLYSEAGVNPVAGCLPLLIQMPVLIAMYQAISRTEVLKTGNFL-WM-NLGAPDP---- 170 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPPPADKGQAMILNWMPVVFVFAL 531 LF I P+I ++ + K MS ++ ++ MP + +F Sbjct: 171 -LF--------------ILPVIAAILTYATTKLSTMSQAESNPTTTTMMYMMPALILFMG 215 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 + P+ L +YW N S+ Q ++ Sbjct: 216 ITLPSALSLYWVVGNAFSVGQTMLL 240 >gi|219120081|ref|XP_002180787.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407503|gb|EEC47439.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 467 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 26/221 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G++I + T V+ L PL+ +Q S +K+++P + +++ K+K + + +A +L Sbjct: 139 SWGVSIAIFTTIVRTLLVPLSIEQSKSAEYIKSLKPYVADIKAKYKNNQ-EAQNRATAKL 197 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR---HAPFWGWIKDLAA-ADPTNIF 474 Y+ NPLAGC+ L+Q+PVF +Y+ + + L M PF WI L P N Sbjct: 198 YEDAQQNPLAGCFVALIQLPVFLGLYRGVRL-LAMDGVLEEPFL-WIPSLEGPVAPPNFQ 255 Query: 475 TLFGILPFYLPGFMHVG--------IWPIIMSLSMFIQMKMSPPPADKGQA--------- 517 L ++ ++ G +G I P+I+ + + M++ PP D+ Sbjct: 256 GLDWLVQGWVNGAPALGWETTLAFLIMPVILVVLQSVTMQVLQPPVDEDATKEERETLER 315 Query: 518 --MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 IL ++P++ F PAGL IYW SN+ ++ Q + Sbjct: 316 SQTILKFLPLLIGFFALQVPAGLTIYWFTSNIFTLTQSLAV 356 >gi|291452650|ref|ZP_06592040.1| membrane protein oxaA [Streptomyces albus J1074] gi|291355599|gb|EFE82501.1| membrane protein oxaA [Streptomyces albus J1074] Length = 431 Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 118/265 (44%), Gaps = 57/265 (21%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ L G G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITTPVSWVIVQFHKLYGALFGDDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS- 448 + +QP++ +++E++K Q + M++LYK NPLA C PILLQ P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKDAGTNPLASCLPILLQSPFFFALYHVLNS 126 Query: 449 ---------------ISLEMRH---APFWGWIKDLA------AADPTNIFTLFGILPFYL 484 S + H AP D A + TN+ + ++ Sbjct: 127 IASNKTIGFIDEALLASAQKAHIVGAPLAAKFTDNADKIEALGSSTTNVHIVTAVM---- 182 Query: 485 PGFMHVGIWPIIMSLSMFIQMKM---------SPPPADKGQAMILNWMPVVFVFALSSFP 535 ++MS S F + P + Q M++ P++F +FP Sbjct: 183 ---------IVLMSASQFFTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPIMFAVFGINFP 233 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 G+++YW +N+ ++ QQ +++ + Sbjct: 234 VGVLVYWLTTNMWTMGQQMYVIRQN 258 >gi|148381582|ref|YP_001256123.1| membrane protein OxaA [Clostridium botulinum A str. ATCC 3502] gi|153931466|ref|YP_001385959.1| putative inner membrane protein translocase component YidC [Clostridium botulinum A str. ATCC 19397] gi|153936249|ref|YP_001389366.1| putative inner membrane protein translocase component YidC [Clostridium botulinum A str. Hall] gi|153940502|ref|YP_001393001.1| putative inner membrane protein translocase component YidC [Clostridium botulinum F str. Langeland] gi|168181112|ref|ZP_02615776.1| membrane protein OxaA [Clostridium botulinum NCTC 2916] gi|170756937|ref|YP_001783280.1| putative inner membrane protein translocase component YidC [Clostridium botulinum B1 str. Okra] gi|226951097|ref|YP_002806188.1| membrane protein OxaA [Clostridium botulinum A2 str. Kyoto] gi|148291066|emb|CAL85203.1| membrane protein [Clostridium botulinum A str. ATCC 3502] gi|152927510|gb|ABS33010.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum A str. ATCC 19397] gi|152932163|gb|ABS37662.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum A str. Hall] gi|152936398|gb|ABS41896.1| membrane protein OxaA [Clostridium botulinum F str. Langeland] gi|169122149|gb|ACA45985.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum B1 str. Okra] gi|182668148|gb|EDT80127.1| membrane protein OxaA [Clostridium botulinum NCTC 2916] gi|226842892|gb|ACO85558.1| membrane protein OxaA [Clostridium botulinum A2 str. Kyoto] gi|295320977|gb|ADG01355.1| membrane protein OxaA [Clostridium botulinum F str. 230613] gi|322807969|emb|CBZ05544.1| inner membrane protein translocase component YidC, short form OxaI-like [Clostridium botulinum H04402 065] Length = 217 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 22/203 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++GIAI+L T+ ++LL PL KQ S+ M +QP+I +L+ K+K P ++ QK M +L Sbjct: 29 SYGIAIILVTLIIRLLILPLNIKQTKSSLRMNELQPEIKKLQAKYKNDPQKLNQKTM-EL 87 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NPL GC P+L+Q P+F A+Y V + + F W+KDLA D + L G Sbjct: 88 YKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTGINGISFL-WVKDLAKPDVV-LAVLSG 145 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS-SFPAG 537 ++ M + + GQ +N +F+ +S + Sbjct: 146 ATTYFSGTLMT------------------TADSSQAGQMKSMNIGMSIFMIVISWKLKSA 187 Query: 538 LIIYWSWSNVISIVQQAVIMKMH 560 L++YW +N+I I+Q ++ KM Sbjct: 188 LVLYWVINNLIQIIQTVIMKKME 210 >gi|311742159|ref|ZP_07715969.1| membrane protein OxaA [Aeromicrobium marinum DSM 15272] gi|311314652|gb|EFQ84559.1| membrane protein OxaA [Aeromicrobium marinum DSM 15272] Length = 328 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 21/221 (9%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 ++I+ TV ++ L PL KQ S+ NM+ +QPKI EL++K+ ++ Q+ M +L+K Sbjct: 45 LSIVGLTVTIRALLIPLFVKQIKSSRNMQLLQPKIKELQKKYGHDRERLTQEQM-KLWKE 103 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL---AAADPTNIFTLFG 478 NP A C P+L Q+PVFFA+++ I + + ++ L + T+FG Sbjct: 104 TGTNPFASCLPLLAQMPVFFALFRTIDQAAKAPADDLERGVRGLFNVEYVESLQGATIFG 163 Query: 479 IL---PFYLPGFMHVGIWPIIMSLSMF---------IQMKMSPPPADKG-----QAMILN 521 F + +I+ ++M + K PP A G Q M+L Sbjct: 164 ARIADTFINTDLTQTRVLTMILVIAMCATQFLTQRQLMAKNMPPDALNGPYAQQQKMLLY 223 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +P VF FP G+++YW+ SN+ ++ QQ +++ + A Sbjct: 224 ILPPVFAIGGIFFPLGVLVYWTTSNLWTMGQQFYVIRRNPA 264 >gi|29830855|ref|NP_825489.1| putative inner membrane protein translocase component YidC [Streptomyces avermitilis MA-4680] gi|34098400|sp|P59811|OXAA_STRAW RecName: Full=Membrane protein oxaA gi|29607968|dbj|BAC72024.1| putative preprotein translocase YidC subunit [Streptomyces avermitilis MA-4680] Length = 428 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 42/271 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+++ G +G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITIPVSWVIVQFHSVYGKVFGADTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKESGTNPLSSCLPILAQSPFFFALYHVLN- 125 Query: 450 SLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFYLPG---------FMHV----GIWP 494 + G I D LA+A +IF F M V I Sbjct: 126 --GIATGKTIGVIDDQLLASARKAHIFGAPLAAKFTDSADKVTQLGATLMDVRVVTAIMI 183 Query: 495 IIMSLSMF-IQMKMSPPPAD--------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MS S F Q ++ D + Q M++ PV+F +FP G+++YW + Sbjct: 184 VLMSASQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAIFGINFPVGVLVYWLTT 243 Query: 546 NVISIVQQAVIMKMH-----GAEIGLIDRLR 571 NV ++ QQ +++ + A+ ++RL+ Sbjct: 244 NVWTMGQQMYVIRNNPTPGSKAQAAFLERLQ 274 >gi|308235529|ref|ZP_07666266.1| membrane protein insertase, YidC/Oxa1 family [Gardnerella vaginalis ATCC 14018] gi|311114011|ref|YP_003985232.1| membrane protein OxaA [Gardnerella vaginalis ATCC 14019] gi|310945505|gb|ADP38209.1| membrane protein OxaA [Gardnerella vaginalis ATCC 14019] Length = 335 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 130/253 (51%), Gaps = 38/253 (15%) Query: 336 WGWFYFIAKP----MFMLMSYFYNL-----VGNFGIAIMLTTVFVKLL----FFPLAKKQ 382 WGWFY I P M +MS F+ L + G + +L+ VF+ L+ FP K Sbjct: 14 WGWFYKILTPVEWLMTQVMSLFHKLFVLIGMNEIGFSWVLSIVFLVLVVHACIFPAFIKS 73 Query: 383 YVSTANMKNIQPKIDELREKFK-QSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 NM+ I PK+ ++++K+K +S P + +Q+ M++LY+ +N NP C P+++Q P Sbjct: 74 IKGMRNMQAIAPKMKKIQQKYKGKSDPASKEAMQREMMKLYQENNANPAGSCLPMMIQGP 133 Query: 439 VFFAIYKVISI---SLEMRHAPFWGWIKDLAAADPTNIFTLFGI------LPFYLPGFMH 489 F +I+ +S+ +H + D+A A +FG+ + G + Sbjct: 134 AFMSIWYTLSVIPFIARGKHTALGAF--DVATAQQFVKTHVFGVGVSDTFMTVQAGGKVV 191 Query: 490 VGIWPIIMSLSM-FIQM----KMSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLI 539 + I+ I+M +M ++Q K PP + +G Q +++ P+++VF+ + P ++ Sbjct: 192 IVIFVILMCAAMWYMQFNNIRKNLPPESKQGPQYTMQKLMMWGFPLIYVFSAFALPFAML 251 Query: 540 IYWSWSNVISIVQ 552 +YW +N++++++ Sbjct: 252 VYWLVNNIMNMLR 264 >gi|239930179|ref|ZP_04687132.1| putative inner membrane protein translocase component YidC [Streptomyces ghanaensis ATCC 14672] gi|291438521|ref|ZP_06577911.1| membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291341416|gb|EFE68372.1| membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 421 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 132/281 (46%), Gaps = 42/281 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+++ G +G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITTPVSWVIVQFHSVYGAVFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDR-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLN- 125 Query: 450 SLEMRHAPFWGWIKD--LAAADPTNIFTL------------FGILPFYLPGFMHV-GIWP 494 + G I + L +A +IF L L V I Sbjct: 126 --SIASNDTIGVINERLLESAQKAHIFGAPLAAKFTDSSEKVAALNSSLTDVRVVTAIMI 183 Query: 495 IIMSLSMF-IQMKMSPPPAD--------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MSLS F Q ++ D + Q M++ P++F +FP G+++YW + Sbjct: 184 VLMSLSQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPIIFAVFGINFPVGVLVYWLTT 243 Query: 546 NVISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYNSQ 581 NV ++ QQ I+ + A+ ++RL ++N ++ Sbjct: 244 NVWTMGQQMYIIHNNPTPGSKAQAAYLERLSKHVARNGKTR 284 >gi|320095103|ref|ZP_08026812.1| membrane protein OxaA [Actinomyces sp. oral taxon 178 str. F0338] gi|319977970|gb|EFW09604.1| membrane protein OxaA [Actinomyces sp. oral taxon 178 str. F0338] Length = 447 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 31/210 (14%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 ++I+L T+ V++ PL KQ S+ M+ +QP+I +++EK+K V ++ M + Sbjct: 39 LSIVLLTILVRVAIVPLLLKQIRSSRAMQAVQPEIRKIQEKYKGKKDMVSRQKMTEETQA 98 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVI---------SISLEMRHAPFWGWIKDLAAA 468 LY+ H ++P A C P+L+Q+PV FA+Y+ I + + + A G I A+ Sbjct: 99 LYRKHKVSPFASCLPLLVQMPVLFAMYRAIYAVKDLAEGTYTYSGQAASSLGPITQTTAS 158 Query: 469 DPTNIFTLFGI----------------LPFYLPGFMHVGIWPIIMSLSMFIQM-KMSPPP 511 + N T+FG+ + F + + V + + M LS M M P Sbjct: 159 E-INGSTVFGVPLSHTLRTETSNSSAAIVFVVAIILMVALQFVSMRLSFSRNMPDMGSNP 217 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 + Q ++ MPV+FVF+ F G+++Y Sbjct: 218 MARSQRSMMYVMPVMFVFSGVFFQMGVVVY 247 >gi|297592067|gb|ADI46852.1| ALB3_1f [Volvox carteri f. nagariensis] Length = 474 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 120/231 (51%), Gaps = 28/231 (12%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G +I+L T+ VK++ +PL K+Q ST ++ ++P++D ++++F ++ QK L Sbjct: 133 SYGYSIILLTLIVKIVTYPLTKQQVESTLAVQALKPRVDLIKDRFGDDKEKI-QKETSIL 191 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLE--MRHAPFWGWIKDLAAADPTNIF- 474 Y+ +NPLAGC P L P+F +Y ++ ++ E + F+ WI LA PT + Sbjct: 192 YEQAGVNPLAGCLPTLATTPIFIGLYSSLTNVANEGLLDTQGFY-WIPSLAG--PTTLAQ 248 Query: 475 --TLFG---ILPFYLPGFMHVG--------IWPIIMSLSMFIQMKMSPPPAD------KG 515 + G + P + G +G P+++ L + + + P +D + Sbjct: 249 RQSGLGTSWLFPL-VDGAPAIGWDAAVAYLTLPVLLILVQYASLYSTGPTSDATDVNARL 307 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 Q +L +PV+ + + P+GL +Y+ + ++S QQ + K+ GA++ + Sbjct: 308 QRALLLGLPVMIGWFALNVPSGLSLYYLSNTILSTAQQVYLKKLGGAKVAI 358 >gi|111226214|ref|YP_717008.1| putative membrane protein oxaA [Frankia alni ACN14a] gi|111153746|emb|CAJ65504.1| putative Membrane protein oxaA [Frankia alni ACN14a] Length = 470 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 72/243 (29%), Positives = 117/243 (48%), Gaps = 36/243 (14%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F S+F + +++L + V++L FPL KQ S M+ +QP+I E+REK+ Sbjct: 22 PIFGADSFFA-----WAFSVVLLVIAVRVLIFPLFVKQVKSQRTMQMMQPRIKEIREKYG 76 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP----FWG 460 P+ +Q+ ++ L K H NPL GC PILLQIP+F +++ V + M P W Sbjct: 77 HDKPR-MQQEIMALQKEHG-NPLLGCLPILLQIPLFISLFHVFTHLAPMNEGPNGALVWR 134 Query: 461 WIKDLAAADPTNIFT--LFGI------------LPFYLPGFMHVGIWPII----MSLSMF 502 L+A I + +FGI + F HV I ++ M L+ F Sbjct: 135 PRVGLSADQVEQIASAKVFGISLASEFGSDSDFVHFLGVNSTHVKILAVVLIVLMGLTTF 194 Query: 503 I---QMKMSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + Q+ P D QA++ L P++ FP +++YW +N+ S+ QQ Sbjct: 195 MTQRQIMARTGPVDPQQAIVQKVLLYGSPLMLAIFGFRFPIAVLLYWLTTNLWSMGQQFF 254 Query: 556 IMK 558 ++K Sbjct: 255 VIK 257 >gi|256391922|ref|YP_003113486.1| hypothetical protein Caci_2731 [Catenulispora acidiphila DSM 44928] gi|256358148|gb|ACU71645.1| 60 kDa inner membrane insertion protein [Catenulispora acidiphila DSM 44928] Length = 334 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 42/227 (18%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 ++I+ T+ ++ PL +KQ S +M+ +QP++ L++K+K Q LQ+ ++LYK Sbjct: 40 LSILFLTITIRAAMIPLFRKQIKSMQHMQRLQPQLQALQKKYKLDK-QKLQQETMKLYKD 98 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI--FTLFGI 479 + +P A C PIL+Q+P F A+Y+V+S HA + L+ AD TNI T FG Sbjct: 99 NGTSPFASCIPILVQLPFFTALYRVLS------HAASGRAVGALSQADATNIQHSTFFGA 152 Query: 480 ---LPFYLP----------GFMHVG---------IWPIIMSLSMFIQMKM---------- 507 L F+ F H + ++ + S F+ +M Sbjct: 153 PIPLRFFTTQTYLNTAANGQFAHTSLVNLRIVALVMVVLYAASQFLTQRMMLTKNTNLDN 212 Query: 508 -SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P P + Q ++L MPV +F S G+++Y +NV +I QQ Sbjct: 213 SVPNPMMQSQKIMLYVMPVGMLFFGLSVQIGVVLYLMTTNVWTIGQQ 259 >gi|251780751|ref|ZP_04823671.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085066|gb|EES50956.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 259 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 25/211 (11%) Query: 351 SYFYNLVGNFGI---------AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +Y ++ + N G+ AI++ T+ ++LL PL K ST M+ +QP++ +L+E Sbjct: 14 NYLHDFILNLGVSDVGLSYVLAILIFTLMIRLLILPLNIKAAKSTQKMQAVQPQMKKLQE 73 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K +P + L + M + YK ++++ GC P LL +P+ A+Y V M A F W Sbjct: 74 KYKGNPEK-LNEEMRKFYKENDVSLTGGCLPSLLPLPILMALYYVFFRIEGMNGASFL-W 131 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 IKDL A D T I + + YLP ++ P M P + G ++ Sbjct: 132 IKDLGARDTTMILPILAAISTYLPSYLMTKATP------------MDDSPMNMGTMSLV- 178 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M ++ F +F + L++YW NVI +Q Sbjct: 179 -MALMMGFMSINFKSILVLYWIIGNVIQTIQ 208 >gi|199597202|ref|ZP_03210634.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001] gi|229552525|ref|ZP_04441250.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus rhamnosus LMS2-1] gi|258508719|ref|YP_003171470.1| preprotein translocase subunit YidC [Lactobacillus rhamnosus GG] gi|258539898|ref|YP_003174397.1| preprotein translocase YidC [Lactobacillus rhamnosus Lc 705] gi|199592006|gb|EDZ00081.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001] gi|229314077|gb|EEN80050.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus rhamnosus LMS2-1] gi|257148646|emb|CAR87619.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus GG] gi|257151574|emb|CAR90546.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus Lc 705] gi|259650025|dbj|BAI42187.1| conserved hypothetical protein [Lactobacillus rhamnosus GG] Length = 330 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 119/236 (50%), Gaps = 35/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLA-KKQYVSTA--- 387 +G FY I P+ LM + VG+ +GIAI++ T+ V+L+ PL ++Q TA Sbjct: 40 FGTFYKIIGLPLQHLMEWIAGFVGSTSSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQE 99 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNIN--PLAGCWPILLQIPVFF 441 K +QP++ +++ K++ Q A M ++Y + + P GC P+L+Q P+F Sbjct: 100 KQKILQPQLKIVQDAVKRAKTPEQQMAANNYMRKIYSANGTSMIPSMGCLPMLIQFPIFS 159 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y+ I+ S E+ HA F+G + + I T+ LP+ II+SL Sbjct: 160 GLYQAIAYSPEISHATFFG----IQLGHSSFIVTILATLPY------------IIVSL-- 201 Query: 502 FIQMKMSPPPADKGQAMILNWMPVV-FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 I ++ PP K P++ FVF + + AGL +Y+ +I I+QQA++ Sbjct: 202 -IMLQGVPPEQRKAMQATAFLSPIMTFVFCM-MYNAGLGLYFGAGGIILIIQQAIV 255 >gi|302535577|ref|ZP_07287919.1| inner membrane protein [Streptomyces sp. C] gi|302444472|gb|EFL16288.1| inner membrane protein [Streptomyces sp. C] Length = 368 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 116/258 (44%), Gaps = 57/258 (22%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITTPVSWIIVQFHKVYGAIFGADSGWAWGLSIVSLVILIRICLIPLFVKQIKATRGM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QALQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLAS 126 Query: 450 ----------------SLEMRH-------APFWGWIKDLAAADP--TNIFTLFGILPFYL 484 S H A F + +AA D TN+ + ++ Sbjct: 127 IANGKTIGVINQPLLESARQAHIFGAPLAAKFMDSAEKVAALDASITNVRIVTAVM---- 182 Query: 485 PGFMHVGIWPIIMSLSMF-IQMKMSPPPAD--------KGQAMILNWMPVVFVFALSSFP 535 ++MSLS F Q ++ D + Q M++ PV+F +FP Sbjct: 183 ---------IVMMSLSQFYTQRQLMQKNVDLSVKTPFMQQQKMLMYIFPVIFAVMGINFP 233 Query: 536 AGLIIYWSWSNVISIVQQ 553 G+++YW +NV ++ QQ Sbjct: 234 VGVLVYWLTTNVWTMGQQ 251 >gi|188588551|ref|YP_001922719.1| putative inner membrane protein translocase component YidC [Clostridium botulinum E3 str. Alaska E43] gi|188498832|gb|ACD51968.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum E3 str. Alaska E43] Length = 259 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 25/211 (11%) Query: 351 SYFYNLVGNFGI---------AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +Y ++ + N G+ AI++ T+ ++LL PL K ST M+ +QP++ +L+E Sbjct: 14 NYLHDFILNLGVSDVGLSYVLAILIFTLMIRLLILPLNIKAAKSTQKMQAVQPQMKKLQE 73 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K +P + L + M + YK ++++ GC P LL +P+ A+Y V M A F W Sbjct: 74 KYKGNPEK-LNEEMRKFYKENDVSLTGGCLPSLLPLPILMALYYVFFRIEGMNGASFL-W 131 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 IKDL A D T I + + YLP ++ P M P + G ++ Sbjct: 132 IKDLGARDTTMILPVLAAISTYLPSYLMTKATP------------MDDSPMNMGTMSLV- 178 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M ++ F +F + L++YW NVI +Q Sbjct: 179 -MALMMGFMSINFKSILVLYWIIGNVIQTIQ 208 >gi|94266688|ref|ZP_01290363.1| 60 kDa inner membrane insertion protein [delta proteobacterium MLMS-1] gi|93452676|gb|EAT03233.1| 60 kDa inner membrane insertion protein [delta proteobacterium MLMS-1] Length = 121 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/126 (45%), Positives = 82/126 (65%), Gaps = 8/126 (6%) Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +LLQIPVFFA+YKV+ S+E+RHAPF WI DL+A D I F +P + + Sbjct: 1 MLLQIPVFFALYKVLLQSVELRHAPFMLWINDLSAPDRLYI-------GFDIPWLGGIPV 53 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++M+ SMFIQ KM+ P AD QA I+ ++P+VF F +F +GL++YW +NV++I Q Sbjct: 54 LTLLMAASMFIQQKMT-PIADPMQARIMLFLPLVFFFLFLNFASGLVLYWFINNVLTIAQ 112 Query: 553 QAVIMK 558 Q I + Sbjct: 113 QYTIYR 118 >gi|191638667|ref|YP_001987833.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23] gi|190712969|emb|CAQ66975.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23] gi|327382708|gb|AEA54184.1| Membrane protein oxaA 2 [Lactobacillus casei LC2W] gi|327385895|gb|AEA57369.1| Membrane protein oxaA 2 [Lactobacillus casei BD-II] Length = 332 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/236 (30%), Positives = 120/236 (50%), Gaps = 35/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLA-KKQYVSTA--- 387 +G FY I P+ LM + +LVG ++GIAI++ T+ V+L+ PL ++Q TA Sbjct: 41 FGTFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQE 100 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNIN--PLAGCWPILLQIPVFF 441 K IQP++ ++E K++ Q AM ++Y + + P GC P+L+Q+P+F Sbjct: 101 KQKIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFS 160 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y+ I+ S E+ A F+G + I T+ LP+ I++SL Sbjct: 161 GLYQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPY------------IVVSL-- 202 Query: 502 FIQMKMSPPPADKGQAMILNWMPVV-FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 I ++ PP K P++ FVF + + AGL +Y+ +I I+QQA++ Sbjct: 203 -IMLQGVPPEQRKAMQTTAFLNPIMTFVFCM-MYNAGLGLYFGAGGIILIIQQAIV 256 >gi|116493571|ref|YP_805306.1| preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC 25745] gi|122264965|sp|Q03D58|OXAA_PEDPA RecName: Full=Membrane protein oxaA; Flags: Precursor gi|116103721|gb|ABJ68864.1| Preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC 25745] Length = 279 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 103/203 (50%), Gaps = 21/203 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ---SPPQVLQKA 414 GN+G I++ T+ ++++ PL Q +T +QPK+ +L++K+ Q L++ Sbjct: 57 GNYGWGIIVFTIIIRIIILPLMIYQTRTTMKTAELQPKLKQLQQKYSSRDAESQQKLREE 116 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY +NP+AGC P+++Q+PV +A+Y +S + ++ F W++ L+ DP Sbjct: 117 QQKLYAEAGVNPMAGCLPLIIQLPVMYALYAAVSRTQVLKEGTFL-WLQ-LSDKDP---- 170 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSS 533 + ILP F + W + MK P + G + + MP+V + + Sbjct: 171 --YFILPILAALFTFMSTW---------LSMKSQPAGSQNGMTSAMTFGMPLVILITALN 219 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 FPA + +YW +N+ + Q +I Sbjct: 220 FPAAITLYWVVTNLFQVGQTLII 242 >gi|294630334|ref|ZP_06708894.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292833667|gb|EFF92016.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 432 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 39/253 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITWPVSWVIVQFHKVYGAIFGADTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKEAGTNPLSSCLPILAQSPFFFALYHVLN- 125 Query: 450 SLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFYLPGFMHV--------------GIW 493 + G+I D LA+A +IF + +L G V + Sbjct: 126 --GIASGNKIGYINDAQLASARQAHIFGA-PLAAKFLDGADTVAKLGASLTDVRVVTALM 182 Query: 494 PIIMSLSMF-IQMKMSPPPAD--------KGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 ++MS S F Q ++ D + Q M++ P++F F FP G+++YW Sbjct: 183 IVLMSASQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPIMFAFFGIRFPVGVLVYWLT 242 Query: 545 SNVISIVQQAVIM 557 +NV ++ QQ ++ Sbjct: 243 TNVWTMGQQMYVI 255 >gi|227534826|ref|ZP_03964875.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|301066722|ref|YP_003788745.1| preprotein translocase subunit YidC [Lactobacillus casei str. Zhang] gi|227187582|gb|EEI67649.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|300439129|gb|ADK18895.1| Preprotein translocase subunit YidC [Lactobacillus casei str. Zhang] Length = 332 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/236 (30%), Positives = 120/236 (50%), Gaps = 35/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLA-KKQYVSTA--- 387 +G FY I P+ LM + +LVG ++GIAI++ T+ V+L+ PL ++Q TA Sbjct: 41 FGTFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQE 100 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNIN--PLAGCWPILLQIPVFF 441 K IQP++ ++E K++ Q AM ++Y + + P GC P+L+Q+P+F Sbjct: 101 KQKIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFS 160 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y+ I+ S E+ A F+G + I T+ LP+ I++SL Sbjct: 161 GLYQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPY------------IVVSL-- 202 Query: 502 FIQMKMSPPPADKGQAMILNWMPVV-FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 I ++ PP K P++ FVF + + AGL +Y+ +I I+QQA++ Sbjct: 203 -IMLQGVPPEQRKAMQTTAFLNPIMTFVFCM-MYNAGLGLYFGAGGIILIIQQAIV 256 >gi|116495158|ref|YP_806892.1| preprotein translocase subunit YidC [Lactobacillus casei ATCC 334] gi|116105308|gb|ABJ70450.1| Preprotein translocase subunit YidC [Lactobacillus casei ATCC 334] Length = 329 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/236 (30%), Positives = 120/236 (50%), Gaps = 35/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLA-KKQYVSTA--- 387 +G FY I P+ LM + +LVG ++GIAI++ T+ V+L+ PL ++Q TA Sbjct: 41 FGTFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQE 100 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNIN--PLAGCWPILLQIPVFF 441 K IQP++ ++E K++ Q AM ++Y + + P GC P+L+Q+P+F Sbjct: 101 KQKIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFS 160 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y+ I+ S E+ A F+G + I T+ LP+ I++SL Sbjct: 161 GLYQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPY------------IVVSL-- 202 Query: 502 FIQMKMSPPPADKGQAMILNWMPVV-FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 I ++ PP K P++ FVF + + AGL +Y+ +I I+QQA++ Sbjct: 203 -IMLQGVPPEQRKAMQTTAFLNPIMTFVFCM-MYNAGLGLYFGAGGIILIIQQAIV 256 >gi|327405480|ref|YP_004346318.1| Membrane protein oxaA [Fluviicola taffensis DSM 16823] gi|327320988|gb|AEA45480.1| Membrane protein oxaA [Fluviicola taffensis DSM 16823] Length = 649 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 75/289 (25%), Positives = 149/289 (51%), Gaps = 31/289 (10%) Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF-- 341 +Y++K + ++ GK+ + F G ++ + Y +D ++ +++ GW F Sbjct: 325 KYRSKLNLGMQSVKDGKASFSWYF---GPNDYHVLASYNQD-----YDDILNLGWGVFRW 376 Query: 342 ----IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +P+F ++F NL N G+AI+L T+ +KL+ P+ K +VS+A MK ++P+ID Sbjct: 377 INLYAVQPVF---TFFMNLGINAGLAILLLTIILKLVLMPVQWKMFVSSAKMKILKPQID 433 Query: 398 ELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++ K+ K+ Q M+ LY+ +PLAGC P+L Q+P+ A+++ + ++R Sbjct: 434 DINAKYPKKEDAMKKQMDMMALYRASGASPLAGCVPMLFQMPILLAVFRFFPATFDLRQR 493 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-------QMKMSP 509 F W +DL++ D +I+ +P Y HV ++ ++M+ + + M Sbjct: 494 GFL-WAEDLSSFD--SIWDFGTYIPLYGN---HVSLFTLLMAGTTLLYTHLNSSNMTQQQ 547 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P +I+ P + +F +++ +GL Y+ S +++I+ VI K Sbjct: 548 QPGMPNMKIIMYMFPFMMIFFFNNYSSGLSYYYFISTLMTIILMFVIKK 596 >gi|213400723|gb|ACJ47010.1| hypothetical protein [Wolbachia endosymbiont of Folsomia candida] Length = 133 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 69/131 (52%), Gaps = 4/131 (3%) Query: 222 AVLG--DKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYL 278 VLG D L E Y +I K + S +W G +DKYW + IP K + K+ Sbjct: 3 GVLGAFDNKLEEWTYKNIAKKHLVKASTSEKNWFGFADKYWLTAIIPDKSEKINVSIKHT 62 Query: 279 S-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + + ++QA F + TILPG S + N FAGAK+ + Y+ L IP F+ ID+G Sbjct: 63 NVNDVDKFQADFVKSYKTILPGTSASNVNHFFAGAKKLKLLDSYKDSLNIPLFDKAIDFG 122 Query: 338 WFYFIAKPMFM 348 YFI KP+F+ Sbjct: 123 VLYFITKPVFL 133 >gi|299538281|ref|ZP_07051566.1| membrane protein oxaA precursor [Lysinibacillus fusiformis ZC1] gi|298726483|gb|EFI67073.1| membrane protein oxaA precursor [Lysinibacillus fusiformis ZC1] Length = 253 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 35/230 (15%) Query: 337 GWFYFI-AKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN-- 391 G+FY I KPM L+ +F N + G++G+AI+ TV ++L+ P+ K Y MK Sbjct: 28 GFFYSIFVKPMEFLLEFFGNDIFSGSYGLAIIAITVLIRLVLMPIMLKNYRQQQLMKTKM 87 Query: 392 --IQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIY 444 +P+++ +++K K++ + Q+ M+ LY+ H INPL GC P+L+Q+P+ +Y Sbjct: 88 DAFKPEMEAVQKKMKEAKTKEEQTQYQQEMMALYQKHGINPLNMGCLPMLIQMPIIMGLY 147 Query: 445 KVISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 I S +++ H W + P + T+ + + + V +W + Sbjct: 148 FSILYSADVKSHEFLW-----FSLGSPDIVMTIVAGIVYLIQA--RVSLWTV-------- 192 Query: 504 QMKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K Q M + P++ VF S A L +YWS S + I+Q Sbjct: 193 ------PEQQKAQMKMFIYISPIMIVFISMSSMAALPLYWSVSGALLIIQ 236 >gi|239632040|ref|ZP_04675071.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526505|gb|EEQ65506.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 320 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/236 (30%), Positives = 120/236 (50%), Gaps = 35/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLA-KKQYVSTA--- 387 +G FY I P+ LM + +LVG ++GIAI++ T+ V+L+ PL ++Q TA Sbjct: 29 FGTFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQE 88 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNIN--PLAGCWPILLQIPVFF 441 K IQP++ ++E K++ Q AM ++Y + + P GC P+L+Q+P+F Sbjct: 89 KQKIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFS 148 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y+ I+ S E+ A F+G + I T+ LP+ I++SL Sbjct: 149 GLYQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPY------------IVVSL-- 190 Query: 502 FIQMKMSPPPADKGQAMILNWMPVV-FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 I ++ PP K P++ FVF + + AGL +Y+ +I I+QQA++ Sbjct: 191 -IMLQGVPPEQRKAMQTTAFLNPIMTFVFCM-MYNAGLGLYFGAGGIILIIQQAIV 244 >gi|159897293|ref|YP_001543540.1| 60 kDa inner membrane insertion protein [Herpetosiphon aurantiacus ATCC 23779] gi|159890332|gb|ABX03412.1| 60 kDa inner membrane insertion protein [Herpetosiphon aurantiacus ATCC 23779] Length = 311 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 12/215 (5%) Query: 345 PMFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F+ + + ++L GN G AI+ T+ V+L PL KQ S + IQPK+ EL+ K+ Sbjct: 6 PIFLPFLEWLFHLFGNLGWAIIAFTILVRLGMLPLTLKQLRSQRKIMVIQPKLRELQRKY 65 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-----SISLEMRHAPF 458 + ++ Q+ M +LY+ H NP+ GC P+L+ +P+ F +++ I S+ F Sbjct: 66 SKDREKLTQETM-KLYREHGANPVGGCLPLLISLPILFGVWQAIQLFGTSVPATAEQVQF 124 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 W+ L N+ P+++ + + + ++ + M+ +P P Sbjct: 125 L-WLPRLTPLIENNVTVNSAHDPYFILPILAIA----LQFITTLMAMQRNPDPQQASMNK 179 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++ +MP +F F FPAG +Y ++I +VQQ Sbjct: 180 VMMFMPFIFGFIYFQFPAGATLYSVTGSLIQLVQQ 214 >gi|182416735|ref|ZP_02948134.1| membrane protein OxaA [Clostridium butyricum 5521] gi|237669614|ref|ZP_04529592.1| 60 kDa inner membrane insertion protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379392|gb|EDT76887.1| membrane protein OxaA [Clostridium butyricum 5521] gi|237654848|gb|EEP52410.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium butyricum E4 str. BoNT E BL5262] Length = 258 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 29/216 (13%) Query: 349 LMSYFYNLVGNFGI---------AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + YF+N++ G+ AI+ TV V+LL P K ST M+ IQP+I ++ Sbjct: 12 IFDYFHNVIVGMGVTDLGLSYVLAILAFTVAVRLLILPFNIKAAKSTRGMQKIQPEIKKI 71 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV-ISISLEMRHAPF 458 ++K+K S PQ + +++LYK +N++ + GC P LL +P+ A+Y V + I+L Sbjct: 72 QDKYK-SDPQKMNTEVMKLYKDNNVSMVGGCLPTLLPLPILMALYWVFMGINLPEGQVAS 130 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + WIKD+ A DP I + L YLP ++ M + P G +M Sbjct: 131 FLWIKDVFAPDPYYILAIVAALSTYLPSYL----------------MTKATPQQPGGMSM 174 Query: 519 -ILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQ 552 +N M + +S +F A L++YW N+I VQ Sbjct: 175 GTMNLMMAGMMGFMSLNFKAILVLYWIMGNLIQAVQ 210 >gi|308179187|ref|YP_003918593.1| preprotein translocase subunit YidC [Arthrobacter arilaitensis Re117] gi|307746650|emb|CBT77622.1| putative preprotein translocase subunit YidC [Arthrobacter arilaitensis Re117] Length = 324 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 32/221 (14%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 ++I+ + ++ L P+ KQ S M+ +QP + +L+ K+K Q+ ++AM+Q Sbjct: 42 LSIIFLVLLIRTLLIPVFVKQIKSQRAMQALQPDLRKLQAKYKGKTDQMSRQAMVQEQQA 101 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 L+K H NPL+ C P+L+Q+P FFA+++V++ E A G +A+ F Sbjct: 102 LFKKHKTNPLSSCLPLLVQMPFFFALFRVLN---EASRASDDGRSIGALSAEHIRSFDQS 158 Query: 478 GILPFYLP----GFMHVG-------IWPIIMSLSM-----FIQMKMSPP---------PA 512 IL L G ++ G I ++M L+M F Q ++ P Sbjct: 159 SILGAPLSETFLGTINSGAVNWAVIIVAVVMILAMTASQFFTQRQLMTKNMSAEALQGPF 218 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + Q M+L +P+VF +FP G++IYW+ SN+ ++ QQ Sbjct: 219 MQQQKMMLYILPLVFGIGGINFPIGVLIYWTASNLWTLGQQ 259 >gi|261338550|ref|ZP_05966434.1| membrane protein OxaA [Bifidobacterium gallicum DSM 20093] gi|270276572|gb|EFA22426.1| membrane protein OxaA [Bifidobacterium gallicum DSM 20093] Length = 337 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 131/266 (49%), Gaps = 49/266 (18%) Query: 331 EMLID---WGWFYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVF----VKLL 374 E L+D WGW Y + P+ LM++ NL F G + +L+ +F V+ Sbjct: 5 EFLLDGGFWGWLYKLLTPIEWLMTWIMNLFHEFLTFIGMPQVGASWVLSIIFLVLVVQAC 64 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPLAGC 430 FPL KQ S +M+ IQPK+ +++ K+K Q+ +Q+ M++LY+ +++NP C Sbjct: 65 IFPLFYKQMKSMRHMQAIQPKMMKIQNKYKGKTDQASKDAMQREMMKLYQDNHVNPAGSC 124 Query: 431 WPILLQIPVFFAIYKVIS----ISLEMRH--APFWGWIKDLAAADPTNIFTLFGI---LP 481 P+L+Q PVF ++ V+S I++ R F D A A FGI Sbjct: 125 LPMLIQGPVFMCMFYVLSAIPYIAIGKRDTLGAF-----DQATAKQFADTHFFGISLQTR 179 Query: 482 FYLP-----GFMHVGIWPIIMSLSM-FIQ---MKMSPPPA------DKGQAMILNWMPVV 526 F P G + +G++ M + F+Q MK + A + Q ++L P++ Sbjct: 180 FTDPSTMVGGKVVIGLFVAAMCFCLWFMQRYTMKHNTAAASMNKQTETMQKVMLWGFPIM 239 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQ 552 ++F+ + P +++YW +N+ ++++ Sbjct: 240 YIFSGIAMPFAVLVYWLTNNICNLLR 265 >gi|325965292|ref|YP_004243198.1| preprotein translocase subunit YidC [Arthrobacter phenanthrenivorans Sphe3] gi|323471379|gb|ADX75064.1| preprotein translocase subunit YidC [Arthrobacter phenanthrenivorans Sphe3] Length = 326 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 32/226 (14%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 ++I+ + ++ P+ KQ + M+ +QP + +L++K+K Q+ ++AM Q Sbjct: 41 LSIIGLVLVIRAALIPVFVKQIKAQRGMQLLQPDLKKLQDKYKGKTDQLSRQAMAQEQMA 100 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWI--KDLAAADPTNIF 474 +YK H NP + C P+L+Q+P FFA++ V+S IS R G + + + D + IF Sbjct: 101 MYKKHGTNPFSACLPMLIQMPFFFALFTVLSGISTASRGGEGIGAMNHEQVVQFDQSTIF 160 Query: 475 ------TLFGILPFYLPGFMHVGIW--PIIMSLSM----FIQMK------MS----PPPA 512 TL P PG V +W I+M L+M FI K MS P Sbjct: 161 GAPLSATLLHGTP---PGGNVVAVWILSILMILAMTASQFITQKQIMAKNMSEEAMASPF 217 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + Q M+L +P+VF +FP G++IYW+ +N+ ++ QQ +++ Sbjct: 218 MRQQKMMLYILPIVFGVGGINFPIGVLIYWTTTNLWTMGQQFFVIR 263 >gi|187934380|ref|YP_001887736.1| inner membrane protein translocase component YidC [Clostridium botulinum B str. Eklund 17B] gi|187722533|gb|ACD23754.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum B str. Eklund 17B] Length = 259 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 25/211 (11%) Query: 351 SYFYNLVGNFGI---------AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +Y ++ + N G+ AI++ T+ ++L+ PL K ST M+ +QPK+ +L+E Sbjct: 14 NYLHDFIVNLGVSDVGLSYVLAILIFTLMIRLIILPLNIKAAKSTQKMQAVQPKMKKLQE 73 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K +P + L + M + YK ++++ GC P LL +P+ A+Y V M A F W Sbjct: 74 KYKGNPEK-LNEEMRKFYKENDVSVTGGCLPSLLPLPILMALYYVFFRIEGMNGASFL-W 131 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I DL A D T I + L YLP ++ P M P + G ++ Sbjct: 132 IADLGAKDKTMILPILAALSTYLPSYLMTKATP------------MDDSPMNMGTMSLV- 178 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M ++ F +F + L++YW NVI +Q Sbjct: 179 -MALMMGFMSINFKSILVLYWIIGNVIQSIQ 208 >gi|282879875|ref|ZP_06288602.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella timonensis CRIS 5C-B1] gi|281306269|gb|EFA98302.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella timonensis CRIS 5C-B1] Length = 626 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 87/355 (24%), Positives = 168/355 (47%), Gaps = 49/355 (13%) Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIP----SKETSFHSQFKYLSDGHAR-YQ 286 +K S+ + + W+ ++++++V I S+E S + G+ + YQ Sbjct: 231 KKLSEASEEIDKKIDDKIDWVAFKNQFFSAVMIAKHDFSEEALMTSVPQEKGSGYLKAYQ 290 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFY 340 AK G+ + F F G +F ++ EK DL + R L+ GW Sbjct: 291 AKMQT--FFDPTGQKASEFEFYF-GPNDFRLLNRIEKESTFNKDLELQR---LVYLGW-- 342 Query: 341 FIAKPMFMLMS-----YFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 P+F +++ Y ++ + + G+ ++L T+ +KL+ +P+ KK Y+S+A M+ + Sbjct: 343 ----PLFRIINRWFTIYVFDWLSKWFPMGVVLILITLLLKLITYPMVKKSYMSSAKMRVL 398 Query: 393 QPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +PK++ ++ + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + ++ Sbjct: 399 KPKLEAATAQYNKPEDQMQKQQAMMAEYSKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAI 458 Query: 452 EMRHAPFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 ++R F WI DL+ DP NI+ + L F I ++ S Q + Sbjct: 459 QLRGESFL-WINDLSTYDPIIQWNKNIWLIGDHLSLTCILFC---IANVLYSWMTMRQQR 514 Query: 507 MSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q ++ W MPV+F F + + AGL Y+ +S+ A IM Sbjct: 515 DQMVGQQAEQMKMMQWMMYLMPVMFFFMFNDYSAGLNFYY----FVSLFFSAAIM 565 >gi|223973321|gb|ACN30848.1| unknown [Zea mays] Length = 297 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 103/195 (52%), Gaps = 24/195 (12%) Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+N+QP++ +++++ + ++ Q +LY+ +NPLAGC+P L IPV+ +Y+ +S Sbjct: 3 MQNLQPQLKAIQQRYAGNQERI-QLETARLYRQAGVNPLAGCFPTLATIPVWIGLYQALS 61 Query: 449 -ISLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVG--------IW 493 ++ E + WI L PT I + + PF + G +G + Sbjct: 62 NVANEGLLTEGFFWIPSLGG--PTTIAARQSGAGISWLFPF-VDGHPPLGWYDTICYLVL 118 Query: 494 PIIMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 P+++ S ++ M+ M PP P+ K ++L ++P + + S P+GL IYW +NV+ Sbjct: 119 PVLLVASQYVSMEIMKPPQSDDPSQKNTLLVLKFLPFMIGYFSLSVPSGLSIYWFTNNVL 178 Query: 549 SIVQQAVIMKMHGAE 563 S QQ + KM GA+ Sbjct: 179 STAQQVWLRKMGGAK 193 >gi|256372785|ref|YP_003110609.1| 60 kDa inner membrane insertion protein [Acidimicrobium ferrooxidans DSM 10331] gi|256009369|gb|ACU54936.1| 60 kDa inner membrane insertion protein [Acidimicrobium ferrooxidans DSM 10331] Length = 336 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 121/258 (46%), Gaps = 39/258 (15%) Query: 342 IAKPMFMLM----SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 I +P+F L+ +++Y ++ ++GIAI L TV V + PL + S M+ IQPK+ Sbjct: 10 IFRPLFELLAGIVTFWYAIIPSYGIAIALLTVTVMVALSPLTIRSTRSMLQMQAIQPKLK 69 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---------- 447 EL+ ++ + L +A +L+K ++PL GC P+LLQ P+ F +Y VI Sbjct: 70 ELQRQYGKDRAG-LAEAQQRLFKEEGVSPLGGCLPMLLQFPLLFVMYDVIRGLTHTVTSH 128 Query: 448 ----SISLEMRHAP--FWGWIKDLAAADPTNIFTLFGILPFYLP-GFMHVGIWPIIMSLS 500 + L + HA + + D D I + P +L GF+H + +++ ++ Sbjct: 129 HAIVAAPLYISHASKLYKNLVADRGHMDFVGIN--LALTPLHLHVGFVHALPYYVLVLIA 186 Query: 501 MFIQ-------MKMSPPPADKGQAMILNWMPVVFVFAL--SSFPAGLIIYWSWSNVISIV 551 + IQ +P A ++ +L VF + PAG+ +Y+ S + + Sbjct: 187 VGIQYLQIQQIASKNPTAAAANRSALLTQQLTTVVFGVIYLDVPAGVAVYFLVSGLFRVA 246 Query: 552 QQAV------IMKMHGAE 563 QQ V +++ H E Sbjct: 247 QQEVMWRRDPVLRAHSVE 264 >gi|312903103|ref|ZP_07762284.1| putative stage III sporulation protein J [Enterococcus faecalis TX0635] gi|310633494|gb|EFQ16777.1| putative stage III sporulation protein J [Enterococcus faecalis TX0635] gi|315163327|gb|EFU07344.1| putative stage III sporulation protein J [Enterococcus faecalis TX0645] gi|315578835|gb|EFU91026.1| putative stage III sporulation protein J [Enterococcus faecalis TX0630] Length = 266 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 23/204 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ--- 409 F +L G+ GI I+L T+ ++++ PL Q S + +QP++ L++K+ P+ Sbjct: 41 FLSLGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQLKALQQKYSSKDPETQR 100 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + ++ +LY +N+NP GC P+L+Q+P+ A+Y+ IS E++ F W+ L D Sbjct: 101 LFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPELKEGTFL-WL-SLDKPD 158 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFV 528 P + ILP F + LS Q++ I+N+ MP + Sbjct: 159 P------YLILPILAAVFTFASTY-----LSSMSQLE------TNASLKIMNYVMPAMIF 201 Query: 529 FALSSFPAGLIIYWSWSNVISIVQ 552 F S + L +YW SN VQ Sbjct: 202 FMGISLASSLSLYWVVSNAFQTVQ 225 >gi|291455688|ref|ZP_06595078.1| membrane protein OxaA [Bifidobacterium breve DSM 20213] gi|291382616|gb|EFE90134.1| membrane protein OxaA [Bifidobacterium breve DSM 20213] Length = 336 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 125/262 (47%), Gaps = 42/262 (16%) Query: 331 EMLID---WGWFYFIAKPMFMLMSYFYNLVGNFGI-------------AIMLTTVFVKLL 374 + L+D WG+ Y I P+ L ++ +V +F + AI++ + V+ Sbjct: 6 QFLLDSGFWGFLYKILTPVEWLQTWIMKIVHDFFVMLGMSPVGVSWILAIIILVLVVQAC 65 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGC 430 FPL KQ S M+ + PK+ ++ K+K Q ++AM ++LY+ +N+NP C Sbjct: 66 IFPLFYKQIKSMRKMQALAPKMQRIQNKYKGKTDQASKEAMSRETMKLYQDNNVNPAGSC 125 Query: 431 WPILLQIPVFFAIYKVISI---SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY---- 483 P+L+Q PVF +++ +S + P + D+A A +FGI+ Sbjct: 126 LPMLIQGPVFMSMFYTLSAIPYIANGKRDPLGAF--DVATAKQFTQTDVFGIVSVTDNFT 183 Query: 484 ---LPGFMHVGIWPIIMSLSM----FIQMKMSPPPA------DKGQAMILNWMPVVFVFA 530 G + +G++ +M + +I MK + A + Q +L PV+++F+ Sbjct: 184 RAATAGKVVIGVFVFLMCFCLWLMQYINMKRNMAAASMNKQTETMQKAMLWLFPVMYIFS 243 Query: 531 LSSFPAGLIIYWSWSNVISIVQ 552 +SFP +++YW +NV ++ + Sbjct: 244 GASFPFAVLVYWLTNNVCNLCR 265 >gi|313885423|ref|ZP_07819173.1| stage III sporulation protein J [Eremococcus coleocola ACS-139-V-Col8] gi|312619153|gb|EFR30592.1| stage III sporulation protein J [Eremococcus coleocola ACS-139-V-Col8] Length = 277 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 21/202 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKA 414 GN+ I I++ TV ++++ P+ K Q S M+ IQP++ L+EK+ + +++Q Sbjct: 59 GNYAIGIIIFTVIIRVILLPVTKMQIESQRKMQEIQPELSRLKEKYPNRDAASMEMMQAE 118 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 ++ + +++N AGC P+L+Q+PV A+Y+ I + E+ F W L DP Sbjct: 119 QKEIMEKNDVNQFAGCLPLLIQLPVLMALYQTIQRTTEINQGYFL-WT-SLGQRDP---- 172 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + ILP I ++ + ++ MK P Q M+ MP++ +F S Sbjct: 173 --YFILPI---------IAALLTFATSYLSMKAQPEKNSSMQIMLFT-MPLMILFIGISL 220 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 PA L +YW +N ++ Q V+ Sbjct: 221 PAALSLYWVVTNAFTVAQTLVL 242 >gi|126651503|ref|ZP_01723707.1| hypothetical protein BB14905_07464 [Bacillus sp. B14905] gi|126591756|gb|EAZ85852.1| hypothetical protein BB14905_07464 [Bacillus sp. B14905] Length = 252 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 35/230 (15%) Query: 337 GWFYFI-AKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN-- 391 G+FY I KPM L+ +F N G++G+AI+ TV ++L+ P+ K Y MK Sbjct: 28 GFFYSIFVKPMEFLLEFFGNNIFAGSYGLAIIAITVLIRLVLMPIMLKNYRQQQLMKTKM 87 Query: 392 --IQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIY 444 +P+++ +++K K++ + Q+ M+ LY+ H INPL GC P+L+Q+P+ +Y Sbjct: 88 DAFKPEMEAVQKKMKEAKTKEEQTQYQQEMMALYQKHGINPLNMGCLPMLIQMPIIMGLY 147 Query: 445 KVISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 I S +++ H W + P + T+ + + + V +W + Sbjct: 148 FSILYSTDVKSHEFLW-----FSLGSPDIVMTIVAGIVYLVQA--RVSLWTV-------- 192 Query: 504 QMKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K Q M + P++ VF S A L +YWS S + I+Q Sbjct: 193 ------PEQQKAQMKMFIYISPIMIVFISMSSMAALPLYWSVSGALLILQ 236 >gi|88854496|ref|ZP_01129163.1| putative inner membrane protein translocase component YidC [marine actinobacterium PHSC20C1] gi|88816304|gb|EAR26159.1| putative inner membrane protein translocase component YidC [marine actinobacterium PHSC20C1] Length = 325 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 113/229 (49%), Gaps = 30/229 (13%) Query: 358 GNFGIAIMLTTV----FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 G+ G+ +L+ V V+ P+ +Q S M + P++ ++++K+K Q ++ Sbjct: 36 GDAGLTWVLSIVGLVLVVRAALIPVFVRQIKSQRRMMEVAPQLKKIQDKYKGKKDQFSRE 95 Query: 414 AM----IQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPFWGWIKDLAAA 468 AM + +YK NP + C P+LLQ+P+FF ++ V+ LE A DLA + Sbjct: 96 AMSRETMAMYKNAGTNPFSSCLPLLLQMPIFFGLFSVLREAQLEDNPAGVGLLNADLAQS 155 Query: 469 DPTNIFTLFGILPFYL---------PGFMHVGIWPIIMSLSMFI----------QMKMSP 509 T+ +LF I P +L P + I I+M+ S FI +M Sbjct: 156 FGTS--SLFDIAPLHLAISTAEGNIPVIITAVIMVILMTGSQFITQLQIMSKNQSAEMKA 213 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P + Q ++L +P+VF F+ +FP G++ YW SN ++ QQ ++++ Sbjct: 214 SPMYRQQRIMLYMLPLVFAFSGFTFPLGVMFYWLVSNFWTMGQQFLVIR 262 >gi|257088483|ref|ZP_05582844.1| preprotein translocase yidC [Enterococcus faecalis CH188] gi|256997295|gb|EEU83815.1| preprotein translocase yidC [Enterococcus faecalis CH188] Length = 275 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 23/204 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ--- 409 F +L G+ GI I+L T+ ++++ PL Q S + +QP++ L++K+ P+ Sbjct: 50 FLSLGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQLKALQQKYSSKDPETQR 109 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + ++ +LY +N+NP GC P+L+Q+P+ A+Y+ IS E++ F W+ L D Sbjct: 110 LFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPELKEGTFL-WL-SLDKPD 167 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFV 528 P + ILP F + LS Q++ I+N+ MP + Sbjct: 168 P------YLILPILAAVFTFASTY-----LSSMSQLE------TNASLKIMNYVMPAMIF 210 Query: 529 FALSSFPAGLIIYWSWSNVISIVQ 552 F S + L +YW SN VQ Sbjct: 211 FMGISLASSLSLYWVVSNAFQTVQ 234 >gi|296271541|ref|YP_003654173.1| 60 kDa inner membrane insertion protein [Thermobispora bispora DSM 43833] gi|296094328|gb|ADG90280.1| 60 kDa inner membrane insertion protein [Thermobispora bispora DSM 43833] Length = 318 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 27/218 (12%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+ + I+ TV ++L +PL KQ S+ ++ + PK+ LRE +K Q L + +++ Sbjct: 35 NWALTIITLTVLMRLAIYPLFVKQMRSSRKLQELAPKLQRLRETYKHDR-QRLAEEQMRV 93 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL----------AAA 468 Y+ +NPL GC PIL Q P+F +I+ V+ E R +G + L A Sbjct: 94 YQEAGVNPLGGCLPILAQSPIFISIFTVLRAIAEDRAV--YGMSQALVDSARAAHIIGAP 151 Query: 469 DPTNIFT------LFGILPF----YLPGFMHVGIWPIIMSLSMFIQ---MKMSPPPADKG 515 P FT FG P L F+ + +++ ++ +M P + Sbjct: 152 LPATFFTSAADIQKFGADPMTTKIVLACFVAISACTTFLTVRQSVRRSIQQMPDNPMVQQ 211 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 Q +++ P++ +F+L +FP GLI+YW +N+ ++ QQ Sbjct: 212 QKILMYVSPLLALFSL-NFPLGLILYWVTTNLWTLGQQ 248 >gi|309799090|ref|ZP_07693343.1| membrane protein OxaA 1 [Streptococcus infantis SK1302] gi|308117325|gb|EFO54748.1| membrane protein OxaA 1 [Streptococcus infantis SK1302] Length = 277 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 111/225 (49%), Gaps = 35/225 (15%) Query: 336 WGWF-YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W F YF A+ + F + + G+ I+L T+ ++ + P+ + Q V++ M+ +QP Sbjct: 40 WSKFVYFFAETI-----RFLSFDTSIGLGIILFTLLIRTILLPVFQIQMVASRKMQEVQP 94 Query: 395 KIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + ELRE++ L + M QL+K H + A WPIL+Q+PV A+++ +S + Sbjct: 95 LVKELRERYPGRDMESRTKLDQEMRQLFKQHGVKQSASLWPILIQMPVLLALFQALS-RV 153 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PP 510 E + WI +L D T + PI+ ++ F+ +S Sbjct: 154 EFLKTGHFLWI-NLGGVDTTFVL-------------------PILAAIFTFLSTWLSNKA 193 Query: 511 PADKGQAM--ILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQ 552 +K AM ++ MPV +F FA+ S P+G+ +YW+ SN ++Q Sbjct: 194 MVEKNGAMTGMMYAMPVMIFFFAMYS-PSGVALYWAVSNAYQVLQ 237 >gi|302559670|ref|ZP_07312012.1| membrane protein OxaA [Streptomyces griseoflavus Tu4000] gi|302477288|gb|EFL40381.1| membrane protein OxaA [Streptomyces griseoflavus Tu4000] Length = 424 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 117/252 (46%), Gaps = 45/252 (17%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+++ G +G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITTPVSWVIVQFHSVYGAVFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNS 126 Query: 450 ----------------SLEMRH---APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 S + H AP D +A +L + + Sbjct: 127 IASNDTIGVINTRLLESAQKAHIFGAPLAAKFTDSSAKVEALNSSLTDVR-------VVT 179 Query: 491 GIWPIIMSLSMF-IQMKMSPPPAD--------KGQAMILNWMPVVFVFALSSFPAGLIIY 541 I ++MSLS F Q ++ D + Q M++ PV+F +FP G+++Y Sbjct: 180 AIMIVLMSLSQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPVIFAVFGINFPVGVLVY 239 Query: 542 WSWSNVISIVQQ 553 W +NV ++ QQ Sbjct: 240 WLTTNVWTMGQQ 251 >gi|297572341|ref|YP_003698115.1| membrane protein insertase, YidC/Oxa1 family [Arcanobacterium haemolyticum DSM 20595] gi|296932688|gb|ADH93496.1| membrane protein insertase, YidC/Oxa1 family [Arcanobacterium haemolyticum DSM 20595] Length = 377 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 36/224 (16%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQ 417 ++I+ T+ +++L PL KQ + + IQP++ +L++K+K Q Q+ ++ Sbjct: 38 LSIVGLTIVIRILIIPLFNKQIRAMRMGQEIQPEVQKLQKKYKGRTDAVSKQRQQEELMA 97 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF--- 474 LY+ +P A C P+L+Q+P+FFA+++++ + G + + A D T Sbjct: 98 LYRERGTSPFASCLPLLIQMPIFFALFRLLYAVDPISK----GQMGTIGAVDKTVAHEIA 153 Query: 475 --TLFGI---------LPFYLPGFMHVG--IWPIIMSLSMFIQMKM----------SPP- 510 TLFG F LP + + I ++M ++F KM P Sbjct: 154 NSTLFGAPLSSSLGTAGTFPLPTNVRIVAIILIVLMMATLFFSQKMIMTKNMPESAQDPD 213 Query: 511 -PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 PA K Q M+L MP++++F +F G+++YW SN+ +I QQ Sbjct: 214 NPAYKMQKMMLYGMPIIYIFTGFAFQVGVLVYWLTSNLWNIGQQ 257 >gi|116872811|ref|YP_849592.1| OxaA-like protein precursor [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741689|emb|CAK20813.1| oxaA/SpoIIIJ family membrane protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 275 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 125/260 (48%), Gaps = 35/260 (13%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G+F ++ +P + + + VG N+G+AI++TT+ ++ L PL AK Q + M Sbjct: 32 GFFSTYLIQPFTSFIMFVASFVGDNYGVAIIITTLLIRALIMPLNLRTAKAQMGMQSKMA 91 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYK 445 +P+IDE++ + K++ + +QK M+ +Y +NINPL GC P+L+Q+P+ A Y Sbjct: 92 VAKPEIDEIQARLKRATSKEEQATIQKEMMTVYSKYNINPLQMGCLPLLIQMPILMAFYY 151 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ F W +L +D M + I ++ L+ + Sbjct: 152 AIRGSSEIASHTFL-WF-NLGESD------------------MVLAIIAGLVYLAQYFVS 191 Query: 506 KMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH---G 561 + P K Q I+ M P++ +F + P+ L +YW+ + Q + K++ Sbjct: 192 MIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 EI ++++ F + + Q Sbjct: 252 PEIKVMEQEEKEFEQIVDEQ 271 >gi|37521800|ref|NP_925177.1| putative inner membrane protein translocase component YidC [Gloeobacter violaceus PCC 7421] gi|35212798|dbj|BAC90172.1| glr2231 [Gloeobacter violaceus PCC 7421] Length = 369 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 75/129 (58%), Gaps = 12/129 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ + Y +V N+G+ I+L T+ VK L +PL S M+ +Q Sbjct: 1 MDFGVGFLTNSVMLPILDFLYRIVPNYGVGIVLLTLIVKGLLWPLTAGSIRSMRKMQVVQ 60 Query: 394 PKID----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P++ E++EK+K P+ +Q+ M LYK + NPLAGC P+++Q+P+ FA++ Sbjct: 61 PEMQRRTKEIQEKYKNE-PERMQQEMAGLYKEYG-NPLAGCLPLVVQMPILFALFAT--- 115 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 116 ---LRGSPF 121 >gi|302336545|ref|YP_003801752.1| membrane protein insertase, YidC/Oxa1 family [Olsenella uli DSM 7084] gi|301320385|gb|ADK68872.1| membrane protein insertase, YidC/Oxa1 family [Olsenella uli DSM 7084] Length = 252 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 67/109 (61%), Gaps = 2/109 (1%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +FI+ M +L S G++GIA+++ T ++L+ PL + S+A M+ +QPK+ Sbjct: 2 WDWFISFLMHVLES-LAGWAGDWGIAVIILTFIMRLIVMPLMTRSTASSARMQALQPKMK 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 E++ ++ P + + + M + Y H NPL GC P+L+Q+PVF A++ V Sbjct: 61 EIQNRYADDPER-MNEEMRKFYSEHKFNPLGGCLPVLVQMPVFVALFTV 108 >gi|288916713|ref|ZP_06411088.1| 60 kDa inner membrane insertion protein [Frankia sp. EUN1f] gi|288351968|gb|EFC86170.1| 60 kDa inner membrane insertion protein [Frankia sp. EUN1f] Length = 476 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 38/246 (15%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F S+F + ++++L + V++L FPL KQ S M+ +QP+I E++EK+ Sbjct: 22 PIFGRDSFFA-----WALSVILLVICVRILIFPLFVKQVKSQRTMQMMQPRIKEIKEKYG 76 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP----FWG 460 Q +Q +++L K H NPL GC PILLQIP+F +++ V + M P W Sbjct: 77 HD-KQQMQLEIMKLQKEHG-NPLLGCLPILLQIPLFISLFHVFTHLAPMNEGPGGSLVWR 134 Query: 461 WIKDLAAADPTNIFT--LFGI------------LPFYLPGFMHVGIWPIIMSLSMFIQ-- 504 L+A I T L+GI L F MH I +++ ++M + Sbjct: 135 PRVGLSADQVEQIATAKLWGISLSSKFTSSPDFLDFLGANGMHTKILAVVLIVTMGVTTF 194 Query: 505 ------MKMSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ- 553 M + D QAM+ L P++ FP +++YW +N+ S+ QQ Sbjct: 195 LTQRQIMNRAGTAVDPQQAMVQKILLYGSPLMLAIFGFRFPIAVLLYWLTTNLWSLGQQF 254 Query: 554 AVIMKM 559 VI KM Sbjct: 255 FVIRKM 260 >gi|329117329|ref|ZP_08246046.1| putative stage III sporulation protein J [Streptococcus parauberis NCFD 2020] gi|326907734|gb|EGE54648.1| putative stage III sporulation protein J [Streptococcus parauberis NCFD 2020] Length = 270 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 21/198 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQKA 414 G+ G+ I+L T+ +++L PL Q S+ M+++QP++ EL+ K+ + L + Sbjct: 51 GSIGVGIILFTLIIRILLMPLFNIQIKSSQRMQDLQPELKELQTKYAGKDTESRMALAEE 110 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK + +NP A +P+L+Q+PV A+++ +S +R F WI +LA ADP Sbjct: 111 SQALYKRNGVNPYASIFPLLIQMPVMIALFQALSRVPFLREGSFL-WI-ELAKADP---- 164 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + ILP F + W ++ + M+ MP++ F S Sbjct: 165 --YFILPILAALFTFLSTW----------LTNLAAKEKNMVMTMMTYAMPLMIFFMGISL 212 Query: 535 PAGLIIYWSWSNVISIVQ 552 +G+++YW+ SN + Q Sbjct: 213 ASGVVLYWTVSNAFQVFQ 230 >gi|302543969|ref|ZP_07296311.1| membrane protein OxaA [Streptomyces hygroscopicus ATCC 53653] gi|302461587|gb|EFL24680.1| membrane protein OxaA [Streptomyces himastatinicus ATCC 53653] Length = 378 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/236 (27%), Positives = 112/236 (47%), Gaps = 34/236 (14%) Query: 353 FYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 FY+L+ + +G++I+ V +++ PL KQ +T NM+ +QPK+ ++E++K S Sbjct: 22 FYSLIFDRNSGWAWGLSIVSLVVLIRICLIPLFVKQIKATRNMQALQPKMKAIQERYK-S 80 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--------------SISLE 452 Q + M++LYK NPL+ C PIL Q P F A+Y+V+ S+ Sbjct: 81 DKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFIALYQVLNHIANNKTVGVIDQSLLDS 140 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSMFIQMKM---- 507 R+A +G + D + G L V I I+ MS S F + Sbjct: 141 ARNAHIFGAPLSVKFMDSASKVESLGA---SLTDVRVVTITMIVLMSASQFFTQRQLMTK 197 Query: 508 -----SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P + Q M++ P++F +FP G+++YW +NV ++ QQ +++ Sbjct: 198 NVDLSVKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLVYWLTTNVWTLGQQMFVIR 253 >gi|332687274|ref|YP_004457048.1| inner membrane protein translocase component YidC [Melissococcus plutonius ATCC 35311] gi|332371283|dbj|BAK22239.1| inner membrane protein translocase component YidC, short form OxaI-like [Melissococcus plutonius ATCC 35311] Length = 275 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 25/209 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ--- 409 F +L N GI I+ T+ ++++ PL Q S M++IQP++ +L++K+ P+ Sbjct: 50 FLSLNRNIGIGIVFFTIVIRVILLPLMYFQTKSMRKMQDIQPQLKKLQQKYSSKDPETQR 109 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + +LY +N+NP AGC P+L+Q+P+ A+Y+ IS E++ F W+ L D Sbjct: 110 LFRDEQQRLYTENNVNPYAGCLPLLVQMPILMALYQAISRIPELKQGNFM-WLA-LNKPD 167 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMS-LSMFIQMKMSPPPADKGQAMILN-WMPVVF 527 P + ILP F + MS L I +K I+N +MPV+ Sbjct: 168 P------YLILPILAAVFTFASTYLSNMSQLESNISLK------------IMNFFMPVMI 209 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +GL +YW+ SN Q V+ Sbjct: 210 FLMGIQLASGLSLYWTVSNAFQAGQTLVL 238 >gi|163842273|ref|YP_001626678.1| inner membrane protein [Renibacterium salmoninarum ATCC 33209] gi|162955749|gb|ABY25264.1| inner membrane protein [Renibacterium salmoninarum ATCC 33209] Length = 321 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 120/236 (50%), Gaps = 30/236 (12%) Query: 353 FYNLVGNFG----IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 F L G+ G ++I+ + ++ P+ KQ + M+ +QP++ +L+EK+K Sbjct: 29 FLGLPGDNGWTWTLSIIGLVIVIRAALIPVFVKQIKAQRGMQALQPEMKKLQEKYKGKTD 88 Query: 409 QVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIK 463 Q+ ++AM Q LYK+H NP + C PIL+Q+P FF++++V+S +S + G + Sbjct: 89 QLSRQAMAQEQMALYKSHGTNPFSACLPILIQMPFFFSLFQVLSGVSKANQDGQGIGVLS 148 Query: 464 --DLAAADPTNIFTL---FGILPFYLPGFMHVG--IWPIIMSLSM----FIQMK------ 506 + D NI LP G +V + IIM L+M FI K Sbjct: 149 HTQIQQFDDANILGAPLSKAFLPQIQGGDPNVSVIVLSIIMILAMIASQFITQKQIMAKN 208 Query: 507 MS----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MS P + Q M+L +P+VF +FP G++IYW+ +N+ ++ QQ +++ Sbjct: 209 MSEDAMASPFMRQQKMMLYILPLVFGIGGINFPIGVLIYWTTTNLWTMGQQFFVIR 264 >gi|260904985|ref|ZP_05913307.1| 60 kDa inner membrane insertion protein [Brevibacterium linens BL2] Length = 319 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 113/218 (51%), Gaps = 21/218 (9%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 ++I T+ ++ + PL Q S M+ +QP+I L+ K+K Q ++AM + Sbjct: 41 LSIAGLTLVIRAVLIPLFVYQIKSQRKMQLLQPEIQRLQAKYKGKKDQYSRQAMAEEQMN 100 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH---APFWGWIKDLA-AADPTNI 473 L++ + +P A C P+L+Q+P+FF++++VI ++ G+ ++LA A+ +++ Sbjct: 101 LFRDNKTSPWASCLPLLVQMPIFFSLFRVIHNMPDVASGSVGAIGGFTQELAIQAEQSSV 160 Query: 474 FTLFGILPFYLPGF---MHVGIWPIIMSLSMFIQMK------MSPP----PADKGQAMIL 520 F + F G + G+ +IM+ +MFI K MS P + Q M+L Sbjct: 161 FGISLSATFMSDGIGVKLLTGVLIVIMASTMFITQKQMMAKNMSESAMANPMMQSQKMLL 220 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MP+VF FP G++ YW SN ++ QQ V+++ Sbjct: 221 YVMPLVFGIGGIYFPLGVLFYWLVSNTWTMCQQHVVIR 258 >gi|311029446|ref|ZP_07707536.1| membrane protein OxaA [Bacillus sp. m3-13] Length = 256 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 107/201 (53%), Gaps = 28/201 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQK 413 G++GI+I++ T+ ++ L PLA KQ + M+ ++P+++ L++K+K +Q+ Sbjct: 55 GSYGISIIIVTIAIRTLILPLALKQQKNMLAMQKLKPEMEALQKKYKDKKKPDDQKEMQQ 114 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM-RHAPFWGWIKDLAAADPTN 472 ++ LY+TH +NP AGC+P+L+Q+PV A Y I + E+ H+ FW L DP Sbjct: 115 ELMALYQTHKVNPAAGCFPMLIQMPVIMAFYYAIGRTTEIAEHSFFW---VSLGQPDPLY 171 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ-AMILNWMPVVFVFAL 531 I P++ +++ FIQ +++ + Q M++N +PV + A Sbjct: 172 IL-------------------PVVAAITTFIQTRVTLTDDVQPQMKMVMNIIPVFILIAG 212 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 + P+ L +YW N+ I Q Sbjct: 213 LTLPSALALYWVIGNLFGIGQ 233 >gi|58699428|ref|ZP_00374178.1| 60 kd inner-membrane protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58534053|gb|EAL58302.1| 60 kd inner-membrane protein [Wolbachia endosymbiont of Drosophila ananassae] Length = 124 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/94 (44%), Positives = 63/94 (67%), Gaps = 2/94 (2%) Query: 51 NSYAAVLIDDRAQAL--SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 N A ++ +R++ + + RV L N + GSI+LKGA+FDDL L YHL+ SS+SP V Sbjct: 31 NDLAPIIHQNRSEIINSTREQRVSLTNNMIKGSISLKGARFDDLILTNYHLEPSSSSPQV 90 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVW 142 LLSP+ +K+ YFAE ++ +N I++P+S VW Sbjct: 91 VLLSPAESKDVYFAEFGWLDPSNRIKVPDSKAVW 124 >gi|257067219|ref|YP_003153475.1| 60 kDa inner membrane insertion protein [Anaerococcus prevotii DSM 20548] gi|256799099|gb|ACV29754.1| 60 kDa inner membrane insertion protein [Anaerococcus prevotii DSM 20548] Length = 245 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 118/244 (48%), Gaps = 43/244 (17%) Query: 341 FIAKPMFMLMSYFYN-LVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 FIA + LM + Y+ L NF IAI++ T+ V LL P+ Q K Sbjct: 4 FIAGILGQLMRWIYDYLAANFTEPTNVSFYAIAIVIMTLLVSLLIIPMTVSQQKQAERTK 63 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-LAGCWPILLQIPVFFAIYKVISI 449 +PK++E+++K+ Q++Q+ M +LYK + P L+GC +++QI + F +++++S Sbjct: 64 VFKPKMEEIQKKYGYD-QQIMQQKMQELYKEEGVTPGLSGCLVMIIQILILFGLFRMMSD 122 Query: 450 S--------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 + L+ F+ WI DL DP FG LP L VG+ Sbjct: 123 TTKYVFTEGLDNIRTNFY-WIPDLLQKDP----YWFG-LPL-LTSLSQVGV--------Q 167 Query: 502 FIQMKMSPPPADKGQAM-----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 MK +P G AM +L MP+++ F PAGL +Y++ S++ +V ++ Sbjct: 168 LFSMKTNPQMQQAGGAMGGMNNMLLLMPLMYFFVFRGLPAGLPLYYTLSSLFRLV---IM 224 Query: 557 MKMH 560 + MH Sbjct: 225 VIMH 228 >gi|242032277|ref|XP_002463533.1| hypothetical protein SORBIDRAFT_01g001520 [Sorghum bicolor] gi|241917387|gb|EER90531.1| hypothetical protein SORBIDRAFT_01g001520 [Sorghum bicolor] Length = 470 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 28/210 (13%) Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+++QP++ ++E++ + +Q +LYK ++PLAGC P L+ IPV+ +Y+ +S Sbjct: 119 MRSLQPQVKAIQERYAGDQ-ERIQLETARLYKLSGVDPLAGCLPTLVTIPVWIGLYRALS 177 Query: 449 -ISLEMRHAPFWGWIKDLAAADPTNIFT---------LF----GILPFYLPGFMHVGIWP 494 ++ E + WI LA PT I LF G P + + P Sbjct: 178 NVANEGLLTEGFFWIPSLAG--PTTIAARQNGQGISWLFPFTDGHPPLGWSDTLAYLVLP 235 Query: 495 IIMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 +++ +S +I + M PP P+ +G + ++P++ + S P+GL +YW +N++S Sbjct: 236 VLLVISQYISTQVMQPPQSNDPSQQGAQAVTKFLPLLIGYFALSVPSGLGLYWLTNNILS 295 Query: 550 IVQQAVIMKMHGAE------IGLIDRLRST 573 QQ + K+ GA+ I ++ R ST Sbjct: 296 TAQQVWLQKLGGAKNPVKEYIDVLSREEST 325 >gi|22298143|ref|NP_681390.1| putative inner membrane protein translocase component YidC [Thermosynechococcus elongatus BP-1] gi|38503003|sp|Q8DL96|OXAA_THEEB RecName: Full=Inner membrane protein oxaA gi|22294322|dbj|BAC08152.1| tll0600 [Thermosynechococcus elongatus BP-1] Length = 401 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 78/129 (60%), Gaps = 12/129 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ V+ +PL+ + MK +Q Sbjct: 1 MDFGIGFLSNNVMLPILDFFYGIVPSYGLAIVALTLVVRFAVYPLSAGSIRNMRRMKVVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P ++ E+++K+K +P + QKAM ++Y+ NPLAGC+P+LLQ+P+ FA++ Sbjct: 61 PIMQKRMQEIQQKYKDNPAE-QQKAMAEVYREFG-NPLAGCFPLLLQLPILFALFAT--- 115 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 116 ---LRGSPF 121 >gi|302552691|ref|ZP_07305033.1| membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302470309|gb|EFL33402.1| membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 428 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 33/251 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+++ G G++I+ + +++ PL KQ ST M Sbjct: 8 FSFITTPVSWVIVQFHSVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKSTRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK---- 445 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNG 126 Query: 446 --------VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV-GIWPII 496 VI+ SL ++ A + AA T+ + L L V I ++ Sbjct: 127 IATGDTIGVINQSL-LQSAQKAHIVGAPLAAKFTDSSSKVEALGASLTDVRVVTAIMIVL 185 Query: 497 MSLSMFIQMKM---------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 MS S F + P + Q M++ PV+F +FP G+++YW +NV Sbjct: 186 MSASQFFTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNV 245 Query: 548 ISIVQQAVIMK 558 ++ QQ +++ Sbjct: 246 WTMGQQMYVIR 256 >gi|15896967|ref|NP_350316.1| putative inner membrane protein translocase component YidC [Clostridium acetobutylicum ATCC 824] gi|38503142|sp|Q97CW0|OXAA_CLOAB RecName: Full=Membrane protein oxaA gi|15026843|gb|AAK81656.1|AE007868_12 Inner membrane protein, SpoIIIJ [Clostridium acetobutylicum ATCC 824] gi|325511144|gb|ADZ22780.1| putative inner membrane protein translocase component YidC [Clostridium acetobutylicum EA 2018] Length = 254 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 116/218 (53%), Gaps = 18/218 (8%) Query: 352 YFYNLVGN----FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 + YN+V + +G+AI++ T+ +K L P + KQ S+ M +QP++ +L+ K K S Sbjct: 21 FVYNIVPDKNYSYGLAIIILTIIIKTLLVPFSIKQIKSSVLMNALQPELKKLQTKLK-SD 79 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 PQ LQ+ ++LYK N+NP GC +++Q P+ A+Y V SL ++ F WI DL+ Sbjct: 80 PQKLQQETMKLYKEKNVNPFGGCLLLIIQYPILIALYYVF-YSLHIKGIGFL-WIHDLSQ 137 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 + +T + ILP + LS + M S PA + Q +N +F Sbjct: 138 KATFSNWTTW-ILPIVSGATTY---------LSGILTMPPSSDPAQRKQTTTMNIGMSIF 187 Query: 528 VFALS-SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + +S +F A L++YW+ SN+ + Q +I+ A++ Sbjct: 188 LLWMSWNFSAALVLYWTVSNLFQMAQSKIIITAVTAKL 225 >gi|317057908|ref|YP_004106375.1| membrane protein insertase, YidC/Oxa1 family [Ruminococcus albus 7] gi|315450177|gb|ADU23741.1| membrane protein insertase, YidC/Oxa1 family [Ruminococcus albus 7] Length = 465 Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 69/109 (63%), Gaps = 1/109 (0%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F IA P+ +M Y + N+GIA+++ T+ KL+ FPL+ KQ S A++ ++PK+DE Sbjct: 2 FDLIAIPLGWIMKGCYYVFKNYGIALLVFTLITKLIVFPLSVKQEKSMASIAMLKPKLDE 61 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 L +K+ ++ Q LQ+ + LY +NP+A C PIL+ + + FA+ VI Sbjct: 62 LEKKYGKN-KQKLQEEQMALYSETGVNPMASCLPILVMMLILFAMIPVI 109 >gi|326405712|gb|ADZ62783.1| preprotein translocase subunit YidC [Lactococcus lactis subsp. lactis CV56] Length = 269 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 21/203 (10%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G G+ I+L T+ ++ PL Q S+ M+ IQP+I +++ K+ + Sbjct: 47 FLSFGGLTGVGIILFTIVIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKNMESRR 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 ++ + + +LY + +NP GC P+++Q+PV +A+Y+ +S ++H F W ++ A D Sbjct: 107 LMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKHGTFL-WF-EIGAKD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT F LP V + LS ++ MK S P + + MP+ + Sbjct: 165 PT----------FILPILAAVFTF-----LSSYLMMK-SAPERNAMTTSMTYIMPIFILI 208 Query: 530 ALSSFPAGLIIYWSWSNVISIVQ 552 +F AG+ +YW SN + Q Sbjct: 209 MGVNFAAGIALYWVISNAFQVFQ 231 >gi|15672111|ref|NP_266285.1| hypothetical protein L131778 [Lactococcus lactis subsp. lactis Il1403] gi|281490609|ref|YP_003352589.1| preprotein translocase subunit YidC [Lactococcus lactis subsp. lactis KF147] gi|38503175|sp|Q9CJ72|OXAA1_LACLA RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|12722977|gb|AAK04227.1|AE006251_3 hypothetical protein L131778 [Lactococcus lactis subsp. lactis Il1403] gi|281374415|gb|ABX75661.2| Preprotein translocase subunit YidC [Lactococcus lactis subsp. lactis KF147] Length = 269 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 21/203 (10%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G G+ I+L T+ ++ PL Q S+ M+ IQP+I +++ K+ + Sbjct: 47 FLSFGGLTGVGIILFTIVIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKDMESRR 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 ++ + + +LY + +NP GC P+++Q+PV +A+Y+ +S ++H F W ++ A D Sbjct: 107 LMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKHGTFL-WF-EIGAKD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT F LP V + LS ++ MK S P + + MP+ + Sbjct: 165 PT----------FILPILAAVFTF-----LSSYLMMK-SAPERNAMTTSMTYIMPIFILI 208 Query: 530 ALSSFPAGLIIYWSWSNVISIVQ 552 +F AG+ +YW SN + Q Sbjct: 209 MGVNFAAGIALYWVISNAFQVFQ 231 >gi|57901135|gb|AAW57888.1| albino3-like protein [Gonium pectorale] Length = 483 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 24/227 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 +G +I+L T+ VKLL +PL K+Q S ++ ++P+ID ++++F +V K L Sbjct: 134 TYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGDDKDKV-SKETSAL 192 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVIS--ISLEMRHAPFWGWIKDLAAADPTNIFT- 475 Y+ +NPLAGC P L IP+F +Y ++ + A + WI LA PT + Sbjct: 193 YEAAGVNPLAGCLPTLATIPIFIGLYSSLTNVANAGSLDAEGFYWIPSLAG--PTTLAMR 250 Query: 476 ------------LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD------KGQA 517 + G P P P+ + + ++ PP D Q Sbjct: 251 QSGLGTSWLLPLVDGAPPIGWPEAAAYLSLPVALVAVQYASSALTSPPIDPKDENAGTQR 310 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +L +P++ + + P+GL +Y+ + V+S Q + K+ GA + Sbjct: 311 ALLVALPLMIGWFSLNVPSGLSLYYLSNTVLSAATQVYLKKLGGANV 357 >gi|194016676|ref|ZP_03055289.1| Oxa1 family cytochrome oxidase biogenesis protein [Bacillus pumilus ATCC 7061] gi|194011282|gb|EDW20851.1| Oxa1 family cytochrome oxidase biogenesis protein [Bacillus pumilus ATCC 7061] Length = 272 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 51/256 (19%) Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 HHY + F LI W L ++F++ ++G++IM T+ V+LL FPL Sbjct: 36 HHY----FVQPFSELIIW------------LANFFHD---DYGLSIMFVTLIVRLLIFPL 76 Query: 379 ----AKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLA-G 429 KKQ V M ++P+IDE++ K K++ + LQ M+++YK +N+NPLA G Sbjct: 77 FANQFKKQRVMQEKMALVKPQIDEIQSKLKKTKEPEKQKELQMEMMKVYKENNVNPLAMG 136 Query: 430 CWPILLQIPVFFAIYKVISISLEM-RHAPFW---GWIKDLAAADPTNIFTLFGILPFYLP 485 C P+L+QIP+ Y I + E+ H+ W G L A ++ L FY+ Sbjct: 137 CLPMLIQIPIVLGFYSAIRSTPEIATHSFLWFNLGQTDLLVAIFAGAMY----FLQFYVT 192 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSW 544 F + + A QA ++ + P++ +F + PA L +YW Sbjct: 193 --------------QRFAKQSGTQTEAALKQAKVMGMIFPIMMLFISINAPAALPLYWMT 238 Query: 545 SNVISIVQQAVIMKMH 560 S ++ +Q ++ M+ Sbjct: 239 SGLLLTIQTIILNVMY 254 >gi|307330013|ref|ZP_07609165.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces violaceusniger Tu 4113] gi|306884389|gb|EFN15423.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces violaceusniger Tu 4113] Length = 379 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 66/236 (27%), Positives = 112/236 (47%), Gaps = 34/236 (14%) Query: 353 FYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 FY+L+ + +G++I+ V +++ PL KQ ST NM+ +QPK+ ++E++K S Sbjct: 22 FYSLIFDRDSGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQALQPKMKAIQERYK-S 80 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--------------SISLE 452 Q + M++LYK NPL+ C PIL Q P F ++Y+V+ ++ Sbjct: 81 DKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFISLYQVLNHIANNKTVGVIDQNLLDS 140 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSMFIQMKM---- 507 R+A +G + D + G L V I II MS S F + Sbjct: 141 ARNAHIFGAPLSVKFMDSASKVESLGA---SLTDVRIVTITMIILMSASQFFTQRQLMTK 197 Query: 508 -----SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P + Q M++ PV+F +FP G+++YW +NV ++ QQ +++ Sbjct: 198 NVDLTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTLGQQMFVIR 253 >gi|284993436|ref|YP_003411991.1| membrane protein insertase, YidC/Oxa1 family [Geodermatophilus obscurus DSM 43160] gi|284066682|gb|ADB77620.1| membrane protein insertase, YidC/Oxa1 family [Geodermatophilus obscurus DSM 43160] Length = 385 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 42/232 (18%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 + ++I+ V V+++ FPL KQ S M+ +QP+I LR+++ S Q +AM+++ Sbjct: 37 TWALSIVFLVVTVRVILFPLFVKQVKSQRAMQELQPEIARLRKQYG-SDRQGFSEAMLKM 95 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVI---------------SISLEMRHAPFWG--- 460 + ++PLAGC PIL QIP+F +++ V+ ++ E APF+G Sbjct: 96 QRERGVSPLAGCLPILPQIPIFLSLFHVLRRLAPDAQGLYSWSAELTDEAARAPFFGAPI 155 Query: 461 -------WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ----MKMSP 509 K+ A D T + ++ F L +IMS + F M+ S Sbjct: 156 SSSFFMSGSKEQAILDITGGYGQIRVVAFLL---------IVIMSFTTFFTQKQIMRRSG 206 Query: 510 PPADKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P + Q M+L MP+ + FP G+++YW +N+ ++ QQ I++ Sbjct: 207 PVEGQAAMVQKMLLYVMPLGLFVSGFLFPIGVLLYWFTNNLWTLGQQFFILR 258 >gi|116334864|ref|YP_796391.1| preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367] gi|116100211|gb|ABJ65360.1| Preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367] Length = 277 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 21/202 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G++G+ I+ T+ ++++ PL Q S + +QP++ L++K+ + +QK + Sbjct: 57 GSYGVGIIAFTIIIRVILMPLMIFQTRSMRKTQEVQPQLKALQKKYSSKDRETMQKLQAE 116 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LY INP+ GC P L+Q+P+ +A+Y+ I + +R F W++ L DP I Sbjct: 117 QQKLYSEAGINPMMGCLPALVQLPIIWALYQAIWRTAVLRSGTFL-WLQ-LGHKDPYFIL 174 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + L +L ++ S P + M++ MPVV F + Sbjct: 175 PILAALATFLSSWLTTK----------------SAPETNSMNTMMIVGMPVVVFFTAMNV 218 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 + L +YW+ S V + Q +I Sbjct: 219 ASSLSLYWTVSYVFQVGQTLLI 240 >gi|282879438|ref|ZP_06288176.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella buccalis ATCC 35310] gi|281298436|gb|EFA90867.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella buccalis ATCC 35310] Length = 631 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 119/553 (21%), Positives = 241/553 (43%), Gaps = 64/553 (11%) Query: 34 NNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 N E K++ +K + D + L Q + + L+N L ++N KG Sbjct: 53 NAELKHLAELKAKQEADTT---ALFHKALQGEAQD--IVLQNEKLQLTLNTKGGTVTKAV 107 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY-VSTANNIELPNSNTVWNLISGKILTP 152 ++G+ D N + L + N + D ++T + P++ T + Sbjct: 108 IKGFE-DREGNKDVTLLDEKVHQLNFTLSTKDTNIATQDLFFQPSAQTDSTVTLTANAGQ 166 Query: 153 TTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTN-NSIDQIRFSPRGRIMRHKPQTA 210 + L +K N L ++ ++ + LF V N N D+ R +G ++ + Sbjct: 167 GKSMVLTYKLGPNYLLHMSMQVNGMNGLFAPDTKVMNVNWKDKCRQQEKGFTFENR--YS 224 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 T T+ ++G L + S E+ I+K W+ ++++++V I + + Sbjct: 225 TLTYHEEDGGTDKLSETS--EKVDEQIDKKI--------DWVAFKNQFFSAVMIAKHDFN 274 Query: 271 FHSQFKYL-SDGHARYQAKFSANEITILPGKSITTTNFLFA-GAKEFPTIHHYE------ 322 + + + + ++ A T T + F F G +F ++ E Sbjct: 275 TGALLTSIPQQKGSGFLKEYEAKLKTFFDPTGQTPSEFEFYFGPNDFRLLNRVEQQSTFN 334 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMS-----YFYNLVGNF---GIAIMLTTVFVKLL 374 KDL + R L+ GW P+F +++ Y ++ + + G+ ++L T+ +K++ Sbjct: 335 KDLELQR---LVYLGW------PLFRIINRWFTIYVFDWLSKWFPMGVVLILITLLLKVI 385 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPI 433 FP+ KK Y+S+A M+ ++PK++ ++ + Q+ Q+AM+ Y + ++PL+GC P+ Sbjct: 386 TFPMVKKSYMSSAKMRVLKPKLEAATAQYNKPEDQMQKQQAMMAEYSKYGVSPLSGCLPM 445 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFM 488 L+Q+P++ A++ + ++++R F WI DL+ DP NI+ + L F Sbjct: 446 LIQMPIWIAMFNFVPNAIQLRGESFL-WINDLSTYDPVIEWNRNIWLIGDHLSLTCILFC 504 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSW 544 + M++ Q + Q ++ W MPV+F F + + +GL Y+ Sbjct: 505 VANVLYSWMTMR---QQRDQMVGQQAEQMKMMQWMMYLMPVMFFFMFNDYSSGLNFYY-- 559 Query: 545 SNVISIVQQAVIM 557 +S+ A IM Sbjct: 560 --FVSLFFSAAIM 570 >gi|184202000|ref|YP_001856207.1| hypothetical protein KRH_23540 [Kocuria rhizophila DC2201] gi|183582230|dbj|BAG30701.1| OxaA family protein [Kocuria rhizophila DC2201] Length = 327 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 54/231 (23%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 + I+ T+ ++ L PL KQ S M+ +QP++ +L+ K+K Q+ ++AM + Sbjct: 41 LCIVGLTLVMRTLTIPLFLKQIKSMRGMQELQPELAKLQAKYKGKKDQLSRQAMAEEQMA 100 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF--- 474 LYK H NP A C PI++Q+P+FFA+++V+ R P AAA+ I Sbjct: 101 LYKEHGSNPFAACLPIIVQMPIFFALFQVL------RSVP-------QAAANNEAIHLLT 147 Query: 475 ----------TLFGILPFYLPGFMHVG------------IWPIIMSLSMFIQMKM----- 507 T+FG P + M G + + MS + FI K Sbjct: 148 PQMVHEFNESTIFGA-PLF-STLMQPGTGNHAATVVLALVMIVAMSATQFITQKQLTSRN 205 Query: 508 -----SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P + Q M+L P++F +FP G+++YW+ SN+ S+ QQ Sbjct: 206 MSDSAKESPMYRQQQMMLYLFPLIFAIGGINFPLGVLVYWTVSNLWSMGQQ 256 >gi|330470829|ref|YP_004408572.1| 60 kDa inner membrane insertion protein [Verrucosispora maris AB-18-032] gi|328813800|gb|AEB47972.1| 60 kDa inner membrane insertion protein [Verrucosispora maris AB-18-032] Length = 325 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 26/222 (11%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ V V+++ FP+ KQ S M+ +QP++ L+EK K + LQK M++LY+ Sbjct: 41 LAIIFLVVTVRVILFPIFVKQIKSQRAMQALQPQVKALQEKHKGDR-ETLQKEMMELYRK 99 Query: 422 HNINPLAGCWPILLQIPVFFAIYKV---ISISLEMRHAPFWGW-IKDLAAADPTNIFTL- 476 NPL GC P+ LQIPVF ++ V ++ + +GW ++ +A +FT Sbjct: 100 EKANPLMGCLPMFLQIPVFLGLFHVLRRLNPDPAKANKDIYGWTVEQFNSASDATLFTAP 159 Query: 477 ----FGILPFYLPGF--------MHVGIWPIIM-------SLSMFIQMKMSPPPADKG-Q 516 FG L + GI ++M S M ++ + P + Q Sbjct: 160 IASKFGSTAAELAQLGANGTTVKVMAGILVLVMMGTTYLTSRQMILKTGWAEDPQQRMIQ 219 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++L +P+ + + + FP G+IIYW +N+ ++ QQ +++ Sbjct: 220 RLMLYGIPLSLLISGAIFPIGVIIYWVTNNLFTLGQQQWVLR 261 >gi|290959008|ref|YP_003490190.1| hypothetical protein SCAB_45861 [Streptomyces scabiei 87.22] gi|260648534|emb|CBG71645.1| putative membrane protein [Streptomyces scabiei 87.22] Length = 421 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 118/260 (45%), Gaps = 53/260 (20%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G +G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITTPVSWVIVQFHTVYGAVFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNS 126 Query: 450 ----------------SLEMRH-------APFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 S + H A F D+ A D + T I+ Sbjct: 127 IANNDTIGVINQSLLESAQKAHIFGAPLAAKFTDSTADVVALDAS--LTTVRIV------ 178 Query: 487 FMHVGIWPIIMSLSMF-IQMKMSPPPAD--------KGQAMILNWMPVVFVFALSSFPAG 537 + ++MS S F Q ++ D + Q M++ PV+F +FP G Sbjct: 179 ---TAVMIVLMSASQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAVFGINFPVG 235 Query: 538 LIIYWSWSNVISIVQQAVIM 557 +++YW +NV ++ QQ ++ Sbjct: 236 VLVYWLTTNVWTMGQQMYVI 255 >gi|183602664|ref|ZP_02964028.1| conserved hypothetical transmembrane protein in the 60 kDa inner membrane protein family [Bifidobacterium animalis subsp. lactis HN019] gi|219684025|ref|YP_002470408.1| hypothetical protein BLA_1550 [Bifidobacterium animalis subsp. lactis AD011] gi|241191630|ref|YP_002969024.1| Preprotein translocase subunit [Bifidobacterium animalis subsp. lactis Bl-04] gi|241197035|ref|YP_002970590.1| Preprotein translocase subunit [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218082|gb|EDT88729.1| conserved hypothetical transmembrane protein in the 60 kDa inner membrane protein family [Bifidobacterium animalis subsp. lactis HN019] gi|219621675|gb|ACL29832.1| membrane protein oxaA [Bifidobacterium animalis subsp. lactis AD011] gi|240250022|gb|ACS46962.1| Preprotein translocase subunit [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251589|gb|ACS48528.1| Preprotein translocase subunit [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177766|gb|ADC85012.1| Inner membrane protein [Bifidobacterium animalis subsp. lactis BB-12] gi|295794622|gb|ADG34157.1| Preprotein translocase subunit [Bifidobacterium animalis subsp. lactis V9] Length = 336 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 122/253 (48%), Gaps = 38/253 (15%) Query: 336 WGWFYFIAKPMFMLMSY-------FYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WG+ Y I P+ LM++ + +G ++ +AI+ + V+ FPL K Sbjct: 13 WGFVYKILTPIEWLMTWVMWVFHKLFTFIGMPEHGISWALAIIFLVIVVQACVFPLYYKS 72 Query: 383 YVSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 M+ +QPK+ +++ K+K + + +Q+ M++LYK +N NP C P+LLQ P Sbjct: 73 MKGMRAMQAMQPKMMKIQNKYKGKNDPASKEAMQREMMKLYKDNNANPAGSCLPMLLQGP 132 Query: 439 VFFAIYKVISI---SLEMRHAPFWGWIKDLAAADPTNIFTLFGI------LPFYLPGFMH 489 VF ++ V+S + +P + D+A A+ + T FG+ G + Sbjct: 133 VFMCMFYVLSAIPYIARGKRSPLGAF--DVATAESFSQSTYFGVKITDSFTTATTTGKVV 190 Query: 490 VGIWPIIMSLSM----FIQMKMSPPPADKG------QAMILNWMPVVFVFALSSFPAGLI 539 +GI+ +M + F M+ + PA Q +L P++++F+ + P ++ Sbjct: 191 IGIFVALMCACLWYMQFYSMRRNTAPASVNRQSQMMQKAMLWVFPIMYIFSGVAMPFAVL 250 Query: 540 IYWSWSNVISIVQ 552 IYW +N+ ++++ Sbjct: 251 IYWLANNICNLLR 263 >gi|307297278|ref|ZP_07577084.1| membrane protein insertase, YidC/Oxa1 family [Thermotogales bacterium mesG1.Ag.4.2] gi|306916538|gb|EFN46920.1| membrane protein insertase, YidC/Oxa1 family [Thermotogales bacterium mesG1.Ag.4.2] Length = 448 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 71/241 (29%), Positives = 127/241 (52%), Gaps = 26/241 (10%) Query: 333 LIDWG---WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 L D+G +F +I + + + Y GNFG A++L T+ + + +PL Q S M Sbjct: 219 LQDFGGVTFFSWIYHGIVYFLFWLYQWSGNFGWALILFTIVTRFILYPLYHIQTKSMLMM 278 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+++++++K+K P+ Q+AM+ LYK NP +GC PILLQ+PV +Y I Sbjct: 279 RMLQPEVEKIKKKYKD--PRKQQEAMMALYKEKGYNPASGCLPILLQLPVLILLYNAIRY 336 Query: 450 SLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 E M + P + KDL+ + F L +PF + I + + +F + ++ Sbjct: 337 FSEVMAYTPGFLIWKDLSVGN----FVL--NIPFII----------ITVVVGIFSSL-LT 379 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 A ++ ++ M V+F ++FP+GL++YW+ +V+ V+ K +G + GL Sbjct: 380 AQDARSARSGVI--MQVIFPILFATFPSGLLLYWTTQSVLQFFISWVVYKRNGIK-GLTL 436 Query: 569 R 569 R Sbjct: 437 R 437 >gi|169829751|ref|YP_001699909.1| membrane protein oxaA [Lysinibacillus sphaericus C3-41] gi|168994239|gb|ACA41779.1| Membrane protein oxaA precursor [Lysinibacillus sphaericus C3-41] Length = 252 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 35/230 (15%) Query: 337 GWFYFI-AKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN-- 391 G FY I KPM L+ +F N G++G+AI+ TV ++L+ P+ K Y MK Sbjct: 28 GIFYSIFVKPMEFLLEFFGNDIFAGSYGLAIIAITVLIRLVLMPIMLKNYRQQQLMKTKM 87 Query: 392 --IQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIY 444 +P+++ +++K K++ + Q+ M+ LY+ H INPL GC P+L+Q+P+ +Y Sbjct: 88 DAFKPEMEAVQKKMKEAKTKEEQTQYQQEMMALYQKHGINPLNMGCLPMLIQMPIIMGLY 147 Query: 445 KVISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 I S +++ H W + P + T+ + + + V +W + Sbjct: 148 FSILYSTDVKSHEFLW-----FSLGSPDIVMTIVAGVVYLVQA--RVSLWTV-------- 192 Query: 504 QMKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K Q M + P++ VF S A L +YWS S + I+Q Sbjct: 193 ------PEQQKAQMKMFIYISPIMIVFISMSSMAALPLYWSVSGALLILQ 236 >gi|86606439|ref|YP_475202.1| inner membrane protein translocase component YidC [Synechococcus sp. JA-3-3Ab] gi|86554981|gb|ABC99939.1| inner membrane protein OxaA [Synechococcus sp. JA-3-3Ab] Length = 392 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 75/136 (55%), Gaps = 11/136 (8%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + MK I Sbjct: 1 MDFGVGFLSNNVMLPILDFFYGIVPSYGLAIIFLTLVIRFALYPLNVGSIRNMRRMKVIN 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P ++ E++EK++ P Q L++A +LY +NPL GC P+L+Q+PV FA++ Sbjct: 61 PLMQRRMREIQEKYRDDP-QKLREAQAKLYSELGVNPLGGCLPLLIQMPVLFALFAT--- 116 Query: 450 SLEMRHAPFWGWIKDL 465 +R +PF D+ Sbjct: 117 ---LRGSPFAAVTYDV 129 >gi|328956378|ref|YP_004373711.1| membrane protein insertase, YidC/Oxa1 family [Coriobacterium glomerans PW2] gi|328456702|gb|AEB07896.1| membrane protein insertase, YidC/Oxa1 family [Coriobacterium glomerans PW2] Length = 260 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 71/112 (63%), Gaps = 4/112 (3%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W W I +F ++ + +L G++G+++++ T+ V+L+ P+ K STA M+ QPK Sbjct: 2 WDW---IVNILFQILKFIQSLAGDWGLSVIILTLIVRLVLAPVLLKSTKSTARMQVYQPK 58 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++E+++K+ PQ Q+ + + Y ++ NPL GC P+LLQ+P+ A++ ++ Sbjct: 59 MEEIKQKYADD-PQRQQQEIQKFYAENHFNPLGGCMPLLLQMPIMIALFTLL 109 >gi|195977384|ref|YP_002122628.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974089|gb|ACG61615.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 269 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 27/201 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G+ GI I+L T+ ++LL PL Q S M++IQP++ L++K+ K + Sbjct: 51 GSTGIGIILFTIMIRLLLLPLFNMQIKSGQKMQDIQPELKALQKKYAAKDTATRMKLAEE 110 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK + +NP P+L+Q+PV FA+++ +S +R F W+ +LA D Sbjct: 111 SQALYKKYGVNPYMSLLPLLIQMPVMFALFQSLSRVAFLREGTFL-WV-ELARHD----- 163 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW---MPVVFVFAL 531 H+ I PI+ ++ F+ ++ A + AMI MP+ F Sbjct: 164 --------------HLFILPILAAVFTFLSTWLTNLAAREKTAMITIMTYVMPIFIFFMG 209 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 + +G+++YW+ SN +VQ Sbjct: 210 FNLASGVVLYWAVSNAFQVVQ 230 >gi|261368848|ref|ZP_05981731.1| stage III sporulation protein J [Subdoligranulum variabile DSM 15176] gi|282569122|gb|EFB74657.1| stage III sporulation protein J [Subdoligranulum variabile DSM 15176] Length = 339 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 52/273 (19%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+A + L+ YNL+GN+ +++ T+ +KLL FPLA Q STA M QP ++E Sbjct: 4 LYFLAILIGPLVKVLYNLIGNYAATMIVATLILKLLLFPLAIHQQKSTAKMSVFQPLMNE 63 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI----------- 447 +++K+K +P + Q+ M++L + H NP+AGC P+LL + V F V+ Sbjct: 64 IQQKYKNNPEK-QQEEMMKLQQEHGFNPMAGCLPMLLTMLVLFGFLGVVYYPVHYIFGVS 122 Query: 448 ---------SISLEMRHA-----PFWGWIKDLAAADPTNI------------FTLFGILP 481 ++ L +A I + A DP+ I FG+ Sbjct: 123 DAAVRQACETLGLATANATTMQTSLIQAIHNGAVIDPSIISADVVNEIKNFNTVFFGMDM 182 Query: 482 FYLPGF--MHVGIWPIIMSLSMFIQMKMSPPPADKGQAM---------ILNWMPVVFVFA 530 +PGF + I+PII +++M + + + G M ++N M V F F Sbjct: 183 CDIPGFNLTPIAIFPIIAAVTMILSYIFTQKLSGMGSQMQGSMKVMMWVMNLMFVSFCF- 241 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + P G +Y+ SN+ I Q V K++ E Sbjct: 242 --NAPVGFSLYYGVSNLFQIGQSFVTYKIYSPE 272 >gi|104774817|ref|YP_619797.1| hypothetical protein Ldb2216 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514946|ref|YP_813852.1| preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423898|emb|CAI98940.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116094261|gb|ABJ59414.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 289 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 19/202 (9%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV---LQKA 414 G++G AI++ TV ++++ PL Q ST M+ IQP++ L+EK+ + L + Sbjct: 70 GSYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEIQPELKALQEKYSSKDLETRNKLNEE 129 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LYK +NP AGC P+++Q+PV +A+Y+ I + EM++ F W+ DL DP Sbjct: 130 TQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAIWRTPEMQNGKF-LWM-DLGKPDP---- 183 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + ILP F + + +S+ Q M+ + M+ W +VF A+S Sbjct: 184 --YYILPILATVFTFLSSYIATLSVPKSSQTTMTKMMSYVMAIMVGIW-AIVFQSAIS-- 238 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 +YW SN+ + Q V+ Sbjct: 239 -----LYWVISNLFQVGQTLVL 255 >gi|325857446|ref|ZP_08172501.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola CRIS 18C-A] gi|325483156|gb|EGC86136.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola CRIS 18C-A] Length = 642 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 82/332 (24%), Positives = 160/332 (48%), Gaps = 33/332 (9%) Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITILP--GKSIT 303 ++ W+ ++++++V I S ++ K D + Y + A+ T G+ + Sbjct: 257 DAMDWVAFKNQFFSAVMIARDNFSAGAKLKSTPLDKESHYLKHYEASMKTGFDPTGRRPS 316 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL------- 356 F F G +F + EK+ RF +D ++ P+F +++ ++ L Sbjct: 317 EFEFYF-GPNDFRLLQAVEKE---SRFGKDLDMQRLVYLGWPLFRIINRWFTLYVFDWLS 372 Query: 357 -VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKA 414 V G+ ++L T+ +KL+ +P+ KK Y+S+A M+ ++PK+DE +F K Q+A Sbjct: 373 KVFPMGVVLILITLLLKLITYPMVKKSYMSSAKMRVLKPKLDEATRQFNKPEDQMQKQQA 432 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT--- 471 M+Q Y + ++PL+GC P+L+Q+P++ A++ + ++++R F W+ DL+ DP Sbjct: 433 MMQKYAEYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGQSFL-WMDDLSTYDPIISW 491 Query: 472 --NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW----MPV 525 N++ + L L + G ++ S Q K Q ++ W MP+ Sbjct: 492 GHNLWLVGDHLS--LTCILFCGA-NLLYSWFTMQQQKDQMVGQQADQMKMMQWMMFAMPL 548 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 F F + + +GL Y+ +S+ A IM Sbjct: 549 FFFFMFNDYSSGLNFYY----FVSLFFSAAIM 576 >gi|317131004|ref|YP_004097286.1| membrane protein insertase, YidC/Oxa1 family [Bacillus cellulosilyticus DSM 2522] gi|315475952|gb|ADU32555.1| membrane protein insertase, YidC/Oxa1 family [Bacillus cellulosilyticus DSM 2522] Length = 268 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 111/224 (49%), Gaps = 23/224 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W F P+ LM N+ N FGI+I++ T+ +++L PL KQ ST M+ IQP++ Sbjct: 36 WDSFFVYPLSWLMIEIANIFNNSFGISIIIVTLLIRILILPLMIKQTKSTKAMQAIQPEM 95 Query: 397 DELREKFKQSPPQVLQKAMIQ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 ELREK+ Q QK + L++ H +NPLAGC PIL+Q+P+ A Y I Sbjct: 96 KELREKYSAKDQQTQQKLQQETMALFQKHGVNPLAGCLPILVQMPILIAFYHAII----- 150 Query: 454 RHAPFWGWIKDLA---AADPTNI--FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 P+ D+A DP F L P+Y I P+I + FIQ KM Sbjct: 151 -RTPYINPEVDIANYGHLDPQVFLWFELGHADPYY--------ILPLIAGATTFIQQKMM 201 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + M++ MP++ + + FP+ L +YW N+ IVQ Sbjct: 202 MVTDNPQMRMMMYIMPLMIMAFAAFFPSALALYWVIGNLFMIVQ 245 >gi|332365878|gb|EGJ43635.1| stage III sporulation protein J [Streptococcus sanguinis SK355] Length = 271 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 23/208 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I L+EK+ Sbjct: 47 FLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESRT 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L + +LYK +NP A P+L+Q+PV A+++ ++ M+ F W+ +L A D Sbjct: 107 ALAEETQKLYKEMGVNPYASFIPLLIQMPVLLALFQALTRVEFMKTGHFL-WL-NLGATD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV-FV 528 PT I L L F W +L P + G +++ MPVV F Sbjct: 165 PTFILPLLAAL------FTFFSTWLSNKAL----------PERNGGMTVMMYLMPVVIFF 208 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 FAL + +G+ +YW+ SN +VQ ++ Sbjct: 209 FALYA-ASGVALYWAVSNAYQVVQTLLL 235 >gi|297158787|gb|ADI08499.1| putative inner membrane protein translocase component YidC [Streptomyces bingchenggensis BCW-1] Length = 387 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 113/238 (47%), Gaps = 38/238 (15%) Query: 353 FYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 FY+L+ + +G++I+ V +++ PL KQ +T NM+ +QPK+ ++E++K S Sbjct: 22 FYSLIFDRDSGWAWGLSIVSLVVLIRICLIPLFVKQIKATRNMQALQPKMKAIQERYK-S 80 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + M++LYK NPL+ C PIL Q P F ++Y+V++ R F D + Sbjct: 81 DRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFISLYQVLNHIANNRTVGFI----DQS 136 Query: 467 AADPTNIFTLFGILPFYL-------------PGFMHVGIWPIIMSLSM-----FIQMKMS 508 D +FG P + V + I+M + M F Q ++ Sbjct: 137 LLDSARSAHIFGA-PLSVKFMSSASKVESLGASLTDVRVVTIVMIVLMSASQFFTQRQLM 195 Query: 509 PPPAD--------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D + Q M++ PV+F +FP G+++YW +NV ++ QQ +++ Sbjct: 196 TKNVDLTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMFVIR 253 >gi|170077612|ref|YP_001734250.1| putative inner membrane protein translocase component YidC [Synechococcus sp. PCC 7002] gi|169885281|gb|ACA98994.1| inner membrane protein YidC/OxaA [Synechococcus sp. PCC 7002] Length = 388 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 12/129 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ K S K Q Sbjct: 1 MDFGIGFLSNNVMLPILDFFYGIVPSYGFAIIALTLVIRFAVYPLSAKSIRSMRRTKITQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P ++ E++E++K P + Q AM ++YK NPLAGC PILLQ+P+ FA++ Sbjct: 61 PLMQKRVKEIQERYKNDPAK-QQAAMSEVYKEFG-NPLAGCLPILLQMPILFALFAT--- 115 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 116 ---LRGSPF 121 >gi|254391432|ref|ZP_05006634.1| membrane protein oxaA [Streptomyces clavuligerus ATCC 27064] gi|197705121|gb|EDY50933.1| membrane protein oxaA [Streptomyces clavuligerus ATCC 27064] Length = 415 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 113/252 (44%), Gaps = 37/252 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI + ++ F+ L G G++I+ V +++ PL KQ S NM Sbjct: 8 FSFITTLVSWIIVQFHKLYGAMFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSMRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QALQPKMKAIQERYKNDR-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYYVLS- 125 Query: 450 SLEMRHAPFWGWIKD--LAAADPTNIF------------TLFGILPFYLPGFMHV-GIWP 494 + G I + L +A +IF L L V + Sbjct: 126 --NIASGKTVGVINESLLESARQAHIFGAPLAAKFMDSEAKVASLDASLTTVRIVTAVMI 183 Query: 495 IIMSLSMFIQMKM---------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MS S F + P + Q M++ PV+F +FP G+++YW + Sbjct: 184 VLMSASQFYTQRQLMQKNVDLSVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTT 243 Query: 546 NVISIVQQAVIM 557 NV ++ QQ ++ Sbjct: 244 NVWTMGQQMYVI 255 >gi|300811989|ref|ZP_07092445.1| putative stage III sporulation protein J [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313124785|ref|YP_004035044.1| preprotein translocase subunit yidc [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300497015|gb|EFK32081.1| putative stage III sporulation protein J [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312281348|gb|ADQ62067.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 289 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 19/202 (9%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV---LQKA 414 G++G AI++ TV ++++ PL Q ST M+ IQP++ L+EK+ + L + Sbjct: 70 GSYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEIQPELKALQEKYSSKDLETRNKLNEE 129 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LYK +NP AGC P+++Q+PV +A+Y+ I + EM++ F W+ DL DP Sbjct: 130 TQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAIWRTPEMQNGKF-LWM-DLGKPDP---- 183 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + ILP F + + +S+ Q M+ + M+ W +VF A+S Sbjct: 184 --YYILPILATVFTFLSSYIATLSVPKSSQTTMTKMMSYVMAIMVGIW-AIVFQSAIS-- 238 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 +YW SN+ + Q V+ Sbjct: 239 -----LYWVISNLFQVGQTLVL 255 >gi|225869761|ref|YP_002745708.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. equi 4047] gi|225699165|emb|CAW92392.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. equi 4047] Length = 275 Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 27/201 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G+ GI I+L T+ ++LL PL Q S M++IQP++ L++K+ K + Sbjct: 57 GSTGIGIILFTIMIRLLLLPLFNMQIKSGQKMQDIQPELKALQKKYAAKDTATRMKLAEE 116 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK + +NP P+L+Q+PV FA+++ ++ +R F W+ +LA D Sbjct: 117 SQALYKKYGVNPYMSLLPLLIQMPVMFALFQSLTRVAFLREGTFL-WV-ELARHD----- 169 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW---MPVVFVFAL 531 H+ I PI+ ++ F+ ++ A + AMI MPV F Sbjct: 170 --------------HLFILPILAAVFTFLSTWLTNLAAREKTAMITIMTYVMPVFIFFMG 215 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 + +G+++YW+ SN +VQ Sbjct: 216 FNLASGVVLYWAVSNAFQVVQ 236 >gi|86609684|ref|YP_478446.1| inner membrane protein translocase component YidC [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558226|gb|ABD03183.1| inner membrane protein OxaA [Synechococcus sp. JA-2-3B'a(2-13)] Length = 396 Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 11/136 (8%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + MK I Sbjct: 1 MDFGVGFLSNNVMLPILDFFYGIVPSYGLAIIFLTLVIRFALYPLNVGSIRNMRRMKVIS 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P ++ EL+EK++ P Q L++A +LY NPL GC P+L+Q+PV FA++ Sbjct: 61 PVMQRRMRELQEKYRDDP-QKLREAQAKLYSELGANPLGGCLPLLIQMPVLFALFAT--- 116 Query: 450 SLEMRHAPFWGWIKDL 465 +R +PF D+ Sbjct: 117 ---LRGSPFAAVTYDV 129 >gi|157692895|ref|YP_001487357.1| OxaA-like protein precursor [Bacillus pumilus SAFR-032] gi|157681653|gb|ABV62797.1| Oxa1 family cytochrome oxidase biogenesis protein [Bacillus pumilus SAFR-032] Length = 272 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 51/256 (19%) Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 HHY + F LI W L ++F++ ++G++IM T+ V+LL FPL Sbjct: 36 HHY----FVQPFSELIIW------------LANFFHD---DYGLSIMFVTLIVRLLIFPL 76 Query: 379 ----AKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLA-G 429 KKQ V M ++P+ID+++ K K++ + LQ M+++YK +N+NPLA G Sbjct: 77 FANQFKKQRVMQEKMALVKPQIDDIQSKLKKTKEPEKQKELQMEMMKVYKENNVNPLAMG 136 Query: 430 CWPILLQIPVFFAIYKVISISLEM-RHAPFW---GWIKDLAAADPTNIFTLFGILPFYLP 485 C P+L+QIP+ Y I + E+ H+ W G L A ++ L FY+ Sbjct: 137 CLPMLIQIPIVLGFYSAIRSTPEIATHSFLWFNLGQTDLLVAIFAGAMY----FLQFYVT 192 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSW 544 F + + A QA ++ + P++ +F + PA L +YW Sbjct: 193 --------------QRFAKQSGTQTEAALKQAKVMGMIFPIMMLFISINAPAALPLYWMT 238 Query: 545 SNVISIVQQAVIMKMH 560 S ++ VQ ++ M+ Sbjct: 239 SGLLLTVQTIILNVMY 254 >gi|303233448|ref|ZP_07320116.1| membrane protein insertase, YidC/Oxa1 family [Atopobium vaginae PB189-T1-4] gi|302480456|gb|EFL43548.1| membrane protein insertase, YidC/Oxa1 family [Atopobium vaginae PB189-T1-4] Length = 253 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 51/206 (24%), Positives = 111/206 (53%), Gaps = 13/206 (6%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 G++G+A+++ T+ ++++ PL K S+A M+ +QP++ +++K+ P + + + Sbjct: 18 QFCGDWGLAVIILTLIIRVILIPLMTKSTESSARMQALQPQMQAIKDKYSDDPAR-MNEE 76 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M + Y H N L GC P++LQ+PVFF ++ V S + +A F+ + ++ + P ++F Sbjct: 77 MQKFYSEHKFNMLGGCLPMVLQMPVFFGLFTVASKIPQ--NASFFSLLPTISLS-PADVF 133 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFAL 531 GI + F+ V + +++ FI M M + + Q + + + F+ Sbjct: 134 QQQGIQTAAIYIFLVV-----LFAVTTFIPMVMNLKNTSEQQRSQTITMGVVMSCFMLWF 188 Query: 532 S-SFPAGLIIYWSWSNVISIVQQAVI 556 + P +++Y++ S++ IVQQ ++ Sbjct: 189 GWTVPTAVLLYYNTSSLWQIVQQKLV 214 >gi|325685110|gb|EGD27241.1| ParB/SpoJ family partitioning protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 289 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 19/202 (9%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV---LQKA 414 G++G AI++ TV ++++ PL Q ST M+ IQP++ L+EK+ + L + Sbjct: 70 GSYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEIQPELKALQEKYSSKDLETRNKLNEE 129 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LYK +NP AGC P+++Q+PV +A+Y+ I + EM++ F W+ DL DP Sbjct: 130 TQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAIWRTPEMQNGKF-LWM-DLGKPDP---- 183 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + ILP F + + +S+ Q M+ + M+ W +VF A+S Sbjct: 184 --YYILPILATVFTFLSSYIATLSVPKSSQTTMTKMMSYVMAIMVGIW-AIVFQSAIS-- 238 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 +YW SN+ + Q V+ Sbjct: 239 -----LYWVISNLFQVGQTLVL 255 >gi|229551109|ref|ZP_04439834.1| stage III sporulation protein [Lactobacillus rhamnosus LMS2-1] gi|229315570|gb|EEN81543.1| stage III sporulation protein [Lactobacillus rhamnosus LMS2-1] Length = 287 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 23/203 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQSPPQV-LQKA 414 GN G+ I+ T+ +++L FPL+ S A + I P++ EL++K+ K + Q L+ Sbjct: 68 GNPGVGIIAFTLIIRILIFPLSYLSIKSMAKQQEIAPQLKELQKKYSSKDTETQTKLRDE 127 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY + +NP+ GC PI++Q+P A+Y+ I + ++ F W+ +L+ DP I Sbjct: 128 TQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSLQSGTFL-WM-NLSQPDPLWIM 185 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP-VVFVFALSS 533 + L +L I M+ P + +++ P ++FVF++ + Sbjct: 186 QILATL----------------FTLGTSILSMMAQPTRNSSSWVMMIISPAMIFVFSV-T 228 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 P+ L IYW +N S+VQQ +I Sbjct: 229 LPSALAIYWVVTNAFSMVQQLLI 251 >gi|199598237|ref|ZP_03211658.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001] gi|258509936|ref|YP_003172687.1| stage III sporulation protein J [Lactobacillus rhamnosus GG] gi|199590840|gb|EDY98925.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001] gi|257149863|emb|CAR88836.1| Stage III sporulation protein J [Lactobacillus rhamnosus GG] gi|259651196|dbj|BAI43358.1| preprotein translocase subunit YidC [Lactobacillus rhamnosus GG] Length = 278 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 23/203 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQSPPQV-LQKA 414 GN G+ I+ T+ +++L FPL+ S A + I P++ EL++K+ K + Q L+ Sbjct: 59 GNPGVGIIAFTLIIRILIFPLSYLSIKSMAKQQEIAPQLKELQKKYSSKDTETQTKLRDE 118 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY + +NP+ GC PI++Q+P A+Y+ I + ++ F W+ +L+ DP I Sbjct: 119 TQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSLQSGTFL-WM-NLSQPDPLWIM 176 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP-VVFVFALSS 533 + L +L I M+ P + +++ P ++FVF++ + Sbjct: 177 QILATL----------------FTLGTSILSMMAQPTRNSSSWVMMIISPAMIFVFSV-T 219 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 P+ L IYW +N S+VQQ +I Sbjct: 220 LPSALAIYWVVTNAFSMVQQLLI 242 >gi|325270361|ref|ZP_08136966.1| inner membrane protein OxaA [Prevotella multiformis DSM 16608] gi|324987305|gb|EGC19283.1| inner membrane protein OxaA [Prevotella multiformis DSM 16608] Length = 642 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 160/332 (48%), Gaps = 33/332 (9%) Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITILP--GKSIT 303 ++ W+ ++++++V I + ++ K D + Y + A+ T G+ + Sbjct: 257 DAMDWVAFKNQFFSAVMIARDNFAAGAKLKSTPLDKESHYLKHYEASMKTGFDPTGRRPS 316 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL------- 356 F F G +F + EK+ RF +D ++ P+F +++ ++ L Sbjct: 317 EFEFYF-GPNDFRLLQSVEKE---SRFGKDLDMQRLVYLGWPLFRIINRWFTLYVFDWLS 372 Query: 357 -VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKA 414 V G+ ++L T+ +KL+ +P+ KK Y+S+A M+ ++PK+DE +F K Q+A Sbjct: 373 KVFPMGVVLILITLLLKLITYPMVKKSYMSSAKMRVLKPKLDEATRQFNKPEDQMQKQQA 432 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT--- 471 M+Q Y + ++PL+GC P+L+Q+P++ A++ + ++++R F W+ DL+ DP Sbjct: 433 MMQKYAEYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGQSFL-WMDDLSTYDPIISW 491 Query: 472 --NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW----MPV 525 N++ + L L + G ++ S Q K Q ++ W MP+ Sbjct: 492 GHNLWLVGDHLS--LTCILFCGA-NLLYSWFTMQQQKDQMVGQQADQMKMMQWMMFAMPL 548 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 F F + + +GL Y+ +S+ A IM Sbjct: 549 FFFFMFNDYSSGLNFYY----FVSLFFSAAIM 576 >gi|296455143|ref|YP_003662287.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. longum JDM301] gi|296184575|gb|ADH01457.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. longum JDM301] Length = 335 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 48/265 (18%) Query: 331 EMLID---WGWFYFIAKPMFMLMSYFYNLVGNF---------GI----AIMLTTVFVKLL 374 E L+D WG+ Y I P+ L ++ +V +F G+ AI++ + V+ Sbjct: 5 EFLLDSGFWGFLYKILTPVEWLQTWIMKIVHDFFAMLGMSPIGVSWVLAIIILVLVVQAC 64 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGC 430 FPL KQ S M+ + PK+ ++ K+K Q ++AM ++LY+ ++ NP C Sbjct: 65 IFPLFYKQMKSMRKMQALAPKMQRIQNKYKGKTDQASKEAMSRETMKLYQDNDANPAGSC 124 Query: 431 WPILLQIPVFFAIYKVIS----ISLEMRHA--PFWGWIKDLAAADPTNIFTLFGILPFY- 483 P+L+Q PVF +++ +S I+ R A F D+A A +FGI+ Sbjct: 125 LPMLIQGPVFMSMFYTLSAIPYIANGKRDALGAF-----DVATAKQFTQTDVFGIVSVTD 179 Query: 484 ------LPGFMHVGIWPIIMSLSM----FIQMKMSPPPA------DKGQAMILNWMPVVF 527 G + +GI+ +M + +I MK + A + Q +L PV++ Sbjct: 180 NFTRASTAGKVVIGIFVFLMCFCLWLIQYINMKRNMAAASMNKQTETMQKAMLWLFPVMY 239 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQ 552 +F+ SFP +++YW +NV ++ + Sbjct: 240 IFSGVSFPFAVLVYWLTNNVCNLCR 264 >gi|125623022|ref|YP_001031505.1| preprotein translocase subunit [Lactococcus lactis subsp. cremoris MG1363] gi|124491830|emb|CAL96750.1| preprotein translocase subunit [Lactococcus lactis subsp. cremoris MG1363] gi|300069769|gb|ADJ59169.1| preprotein translocase subunit [Lactococcus lactis subsp. cremoris NZ9000] Length = 269 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 21/203 (10%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G G+ I+L T+ ++ PL Q S+ M+ IQP+I +++ K+ + Sbjct: 47 FLSFGGLTGVGIILFTIIIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKDMESRR 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 ++ + + +LY + +NP GC P+++Q+PV +A+Y+ +S ++H F W ++ A D Sbjct: 107 LMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKHGTFL-WF-EIGAKD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT I + I LS ++ MK S P + + MP+ + Sbjct: 165 PTFILPILA---------------AIFTFLSSYLMMK-SAPERNAMTTSMTYIMPIFILI 208 Query: 530 ALSSFPAGLIIYWSWSNVISIVQ 552 +F +G+ +YW SN + Q Sbjct: 209 MGVNFASGIALYWVISNAFQVFQ 231 >gi|227533510|ref|ZP_03963559.1| stage III sporulation protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188839|gb|EEI68906.1| stage III sporulation protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 264 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 104/203 (51%), Gaps = 23/203 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQSPPQV-LQKA 414 GN G+ I+ T+ +++L FPL+ S + + I P++ EL++K+ K + Q L+ Sbjct: 45 GNPGVGIIAFTLIIRILIFPLSYMSIKSMSKQQEIAPQLKELQKKYSSKDTESQTRLRDE 104 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY + +NP+ GC PI++Q+P A+Y+ I + ++ F W+ +L+ DP I Sbjct: 105 TQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSLQTGTFL-WM-NLSQPDPLWIM 162 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFVFALSS 533 + L +L + M+ P + +++ PV +FVF++ + Sbjct: 163 QILATL----------------FTLGTSVLSMMAQPTRNSSSWLMMIVSPVMIFVFSI-T 205 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 P+ L IYW +N S++QQ +I Sbjct: 206 LPSALAIYWVVTNAFSMIQQLLI 228 >gi|116510957|ref|YP_808173.1| preprotein translocase subunit YidC [Lactococcus lactis subsp. cremoris SK11] gi|116106611|gb|ABJ71751.1| Preprotein translocase subunit YidC [Lactococcus lactis subsp. cremoris SK11] Length = 269 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 21/203 (10%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G G+ I+L T+ ++ PL Q S+ M+ IQP+I +++ K+ + Sbjct: 47 FLSFGGLTGVGIILFTIIIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKDMESRR 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 ++ + + +LY + +NP GC P+++Q+PV +A+Y+ +S ++H F W ++ A D Sbjct: 107 LMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKHGTFL-WF-EIGAKD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT I + I LS ++ MK S P + + MP+ + Sbjct: 165 PTFILPILA---------------AIFTFLSSYLMMK-SAPERNAMTTSMTYIMPIFILI 208 Query: 530 ALSSFPAGLIIYWSWSNVISIVQ 552 +F +G+ +YW SN + Q Sbjct: 209 MGVNFASGIALYWVISNAFQVFQ 231 >gi|191639866|ref|YP_001989032.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23] gi|239630800|ref|ZP_04673831.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067927|ref|YP_003789950.1| preprotein translocase subunit YidC [Lactobacillus casei str. Zhang] gi|190714168|emb|CAQ68174.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23] gi|239527083|gb|EEQ66084.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300440334|gb|ADK20100.1| Preprotein translocase subunit YidC [Lactobacillus casei str. Zhang] gi|327383980|gb|AEA55456.1| Membrane protein oxaA 1 [Lactobacillus casei LC2W] gi|327387164|gb|AEA58638.1| Membrane protein oxaA 1 [Lactobacillus casei BD-II] Length = 278 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 104/203 (51%), Gaps = 23/203 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQSPPQV-LQKA 414 GN G+ I+ T+ +++L FPL+ S + + I P++ EL++K+ K + Q L+ Sbjct: 59 GNPGVGIIAFTLIIRILIFPLSYMSIKSMSKQQEIAPQLKELQKKYSSKDTETQTRLRDE 118 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY + +NP+ GC PI++Q+P A+Y+ I + ++ F W+ +L+ DP I Sbjct: 119 TQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSLQTGTFL-WM-NLSQPDPLWIM 176 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFVFALSS 533 + L +L + M+ P + +++ PV +FVF++ + Sbjct: 177 QILATL----------------FTLGTSVLSMMAQPTRNSSSWLMMIVSPVMIFVFSI-T 219 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 P+ L IYW +N S++QQ +I Sbjct: 220 LPSALAIYWVVTNAFSMIQQLLI 242 >gi|225869297|ref|YP_002745245.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. zooepidemicus] gi|225702573|emb|CAX00574.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. zooepidemicus] Length = 275 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 27/201 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G+ GI I+L T+ ++LL PL Q S M++IQP++ L++K+ K + Sbjct: 57 GSTGIGIILFTIMIRLLLLPLFNMQIKSGQKMQDIQPELKALQKKYAAKDTATRMKLAEE 116 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK + +NP P+L+Q+PV FA+++ ++ +R F W+ +LA D Sbjct: 117 SQALYKKYGVNPYMSLLPLLIQMPVMFALFQSLTRVAFLREGTFL-WV-ELARHD----- 169 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW---MPVVFVFAL 531 H+ I PI+ ++ F+ ++ A + AMI MP+ F Sbjct: 170 --------------HLFILPILAAVFTFLSTWLTNLAAREKTAMITIMTYVMPIFIFFMG 215 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 + +G+++YW+ SN +VQ Sbjct: 216 FNLASGVVLYWAVSNAFQVVQ 236 >gi|325126646|gb|ADY85976.1| Stage III sporulation protein J [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 289 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 19/202 (9%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV---LQKA 414 G++G AI++ TV ++++ PL Q ST M+ IQP++ L+EK+ + L + Sbjct: 70 GSYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEIQPELKALQEKYSSKDLETRNKLNEE 129 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LYK +NP AGC P+++Q+PV +A+Y+ I + EM++ F W+ DL DP Sbjct: 130 TQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAIWRTPEMQNGKF-LWM-DLGKPDP---- 183 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + ILP F + + +S+ Q M+ + M+ W V F Sbjct: 184 --YYILPILATVFTFLSSYIATLSVPKSSQTTMTKMMSYVMAIMVGIWAIV--------F 233 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 + + +YW SN+ + Q V+ Sbjct: 234 QSAIPLYWVISNLFQVGQTLVL 255 >gi|302346738|ref|YP_003815036.1| membrane protein insertase, YidC/Oxa1 family [Prevotella melaninogenica ATCC 25845] gi|302150409|gb|ADK96670.1| membrane protein insertase, YidC/Oxa1 family [Prevotella melaninogenica ATCC 25845] Length = 643 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 86/340 (25%), Positives = 160/340 (47%), Gaps = 49/340 (14%) Query: 247 ESNSWLGISDKYWASVFIPS---------KETSFHSQFKYLSDGHARYQAKFSANEITIL 297 +S W+ ++++++V I K T YL A +A F Sbjct: 257 DSMDWVAFKNQFFSAVMIAKDNFATGAKLKSTPLEKSSHYLKHYEANMKAGFDPT----- 311 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL- 356 GK + F F G +F + E + +F +D ++ P+F +++ ++ L Sbjct: 312 -GKRPSEFEFYF-GPNDFRLLQSVETE---SKFAKELDMERLVYLGWPLFRIINRWFTLY 366 Query: 357 -------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPP 408 V G+ ++L T+ +KL+ FP+ KK Y+S+A M+ ++PK+DE ++F K Sbjct: 367 VFDWLSKVFPMGVVLILITLLLKLITFPMVKKSYMSSAKMRVLKPKLDEATKQFNKPEDQ 426 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q+AM+Q Y + ++PL+GC P+L+Q+P++ A++ + ++++R F W+ DL+ Sbjct: 427 MQKQQAMMQKYSEYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGQSFL-WMHDLSTF 485 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-------QMKMSPPPADKGQAMILN 521 DP IF+ + +L G H+ + I+ + + Q K Q ++ Sbjct: 486 DP--IFSWSHDV--WLVG-DHISLTCILFCGANLLYTWFTMQQQKDQMVGQQADQMKMMQ 540 Query: 522 W----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 W MP+ F F + + +GL Y+ IS+ A IM Sbjct: 541 WMMFGMPLFFFFMFNDYSSGLNFYY----FISLFFSAAIM 576 >gi|119963653|ref|YP_949872.1| 60Kd inner membrane family protein [Arthrobacter aurescens TC1] gi|119950512|gb|ABM09423.1| putative 60Kd inner membrane family protein [Arthrobacter aurescens TC1] Length = 329 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 114/224 (50%), Gaps = 27/224 (12%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 ++I+ + ++ P+ KQ + M+ +QP + +L+ K+K Q+ ++AM Q Sbjct: 41 LSIIGLVLVIRAALIPVFVKQIKAQRGMQLLQPDLKKLQTKYKGKTDQLSRQAMAQEQMA 100 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWI--KDLAAADPTNIF 474 LYK H NP + C P+L+Q+P FFA+++V+S IS + G + + + D ++IF Sbjct: 101 LYKKHGTNPFSACLPMLIQMPFFFALFQVLSGISTNAKQGQGVGAMSHEQVVQFDSSSIF 160 Query: 475 T--LFGILPFYLP--GFMHVGIWP------IIMSLSMFIQMK------MS----PPPADK 514 L L P G V +W I M+ S FI K MS P + Sbjct: 161 GAPLSASLLHGDPSGGNSAVAVWVLSIVMIIAMTASQFITQKQIMAKNMSEEAMASPFMR 220 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q M+L +P+VF +FP G++IYW+ +N+ ++ QQ +++ Sbjct: 221 QQKMMLYILPLVFGIGGINFPIGVLIYWTTTNLWTMGQQFFVIR 264 >gi|312869223|ref|ZP_07729395.1| putative stage III sporulation protein J [Lactobacillus oris PB013-T2-3] gi|311095244|gb|EFQ53516.1| putative stage III sporulation protein J [Lactobacillus oris PB013-T2-3] Length = 269 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 107/223 (47%), Gaps = 23/223 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N G +G+ I++ T+ +++L PLA Q S M+ I P++ Sbjct: 29 WDHYIVYNFSQFIIWLSNHTGGYGMGIIIFTIIIRVLLLPLAFYQTKSMVRMQEITPQLK 88 Query: 398 ELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++K+ + +Q+ +LYK ++P+A P+++Q+P+ +A+Y+ I + E+R Sbjct: 89 AVQKKYSSRDRDSMMKMQEETQKLYKEAGVHPMASMLPMIVQLPIMWALYQAIWRTPELR 148 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 H F W++ L DP + +LP F V W + M+ P Sbjct: 149 HGTFL-WLQ-LGHTDP------YYVLPVLAAVFTFVSSW-----------LSMASMPEKN 189 Query: 515 GQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ W MP++ F F + + +YW SN +VQ ++ Sbjct: 190 SMTTMMTWFMPIMIFFMALGFSSAITLYWVVSNAFQVVQTLLL 232 >gi|116496323|ref|YP_808057.1| preprotein translocase subunit YidC [Lactobacillus casei ATCC 334] gi|116106473|gb|ABJ71615.1| Preprotein translocase subunit YidC [Lactobacillus casei ATCC 334] Length = 278 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 103/203 (50%), Gaps = 23/203 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQSPPQV-LQKA 414 GN G+ I+ T+ +++L FPL+ S + + I P++ EL+ K+ K + Q L+ Sbjct: 59 GNPGVGIIAFTLIIRILIFPLSYMSIKSMSKQQEIAPQLKELQRKYSSKDTETQTRLRDE 118 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY + +NP+ GC PI++Q+P A+Y+ I + ++ F W+ +L+ DP I Sbjct: 119 TQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSLQTGTFL-WM-NLSQPDPLWIM 176 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFVFALSS 533 + L +L + M+ P + +++ PV +FVF++ + Sbjct: 177 QILATL----------------FTLGTSVLSMMAQPTRNSSSWLMMIVSPVMIFVFSI-T 219 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 P+ L IYW +N S++QQ +I Sbjct: 220 LPSALAIYWVVTNAFSMIQQLLI 242 >gi|332360026|gb|EGJ37840.1| stage III sporulation protein J [Streptococcus sanguinis SK1056] Length = 271 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 23/208 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I +L+EK+ Sbjct: 47 FLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESRT 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L + +LYK +NP A P+ +Q+PV A+++ ++ M+ F W+ +L A D Sbjct: 107 ALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDFMKTGHFL-WL-NLGATD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV-FV 528 PT I L L F W +L P + G +++ MPVV F Sbjct: 165 PTFILPLLAAL------FTFFSTWLSNKAL----------PERNGGMTVMMYLMPVVIFF 208 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 FAL + +G+ +YW+ SN +VQ ++ Sbjct: 209 FALYA-ASGVALYWAVSNAYQVVQTLLL 235 >gi|168187281|ref|ZP_02621916.1| membrane protein OxaA [Clostridium botulinum C str. Eklund] gi|169294774|gb|EDS76907.1| membrane protein OxaA [Clostridium botulinum C str. Eklund] Length = 246 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 26/207 (12%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G+ I++ T+ ++L+ FPL KQ S M IQP++ +L+ K+K P Q Q+ M++L Sbjct: 43 SYGLTIIIVTIIIRLVLFPLNYKQIKSQVAMNEIQPELKKLQNKYKNDP-QKQQQEMMKL 101 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK + +NPL GC P+L+Q P+ A+Y V S +L+ DP+ F Sbjct: 102 YKEYGVNPLGGCLPLLIQWPILIALYYVFS---------------NLSKIDPSISNVTFL 146 Query: 479 ILPFYLPGFMHVGIW-----PIIMSLSMFIQMK-MSPPPADKGQA----MILNWMPVVFV 528 L P + W P++ L ++ M+ AD Q M+ +M + Sbjct: 147 GLKLMNPAVLSPSQWYTWILPLLSGLLTYLSTAMMTSKNADSAQVKQTRMMSGFMTLFIT 206 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAV 555 + F L++YW +++ I Q V Sbjct: 207 YMSFKFSTALVLYWVTNSLFQIGQTLV 233 >gi|118442981|ref|YP_876977.1| inner membrane protein translocase component YidC [Clostridium novyi NT] gi|118133437|gb|ABK60481.1| Membrane protein oxaA [Clostridium novyi NT] Length = 246 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 26/210 (12%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G+ I++ T+ ++L+ FPL KQ S M IQP++ +L+ K+K P Q Q+ M++L Sbjct: 43 SYGLTIIIVTIIIRLVLFPLNYKQIKSQVAMNEIQPELKKLQNKYKNDP-QKQQQEMMKL 101 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK + +NPL GC P+L+Q P+ A+Y V + +L+ DP+ F Sbjct: 102 YKEYGVNPLGGCLPLLIQWPILIALYYVFN---------------NLSKIDPSITNVTFL 146 Query: 479 ILPFYLPGFMHVGIW-----PIIMSLSMFIQMK-MSPPPADKGQ----AMILNWMPVVFV 528 L P + W PI+ L ++ M+ AD Q M+ +M + Sbjct: 147 GLKLMNPAILSPSHWYTWILPILSGLLTYLSTAIMTSKNADSAQIKQTRMMGGFMTLFIT 206 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + F L++YW +++ I Q V + Sbjct: 207 YMSFKFSTALVLYWVTNSLFQIGQTLVTQR 236 >gi|324989805|gb|EGC21748.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK353] Length = 271 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 23/208 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I +L+EK+ Sbjct: 47 FLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESRT 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L + +LYK +NP A P+ +Q+PV A+++ ++ M+ F W+ +L A D Sbjct: 107 ALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDFMKTGHFL-WL-NLGATD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV-FV 528 PT I L L F W +L P + G +++ MPVV F Sbjct: 165 PTFILPLLAAL------FTFFSTWLSNKAL----------PERNGGMTVMMYLMPVVIFF 208 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 FAL + +G+ +YW+ SN +VQ ++ Sbjct: 209 FALYA-ASGVALYWAVSNAYQVVQTLLL 235 >gi|323357960|ref|YP_004224356.1| preprotein translocase subunit YidC [Microbacterium testaceum StLB037] gi|323274331|dbj|BAJ74476.1| preprotein translocase subunit YidC [Microbacterium testaceum StLB037] Length = 358 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 115/225 (51%), Gaps = 29/225 (12%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQ 417 ++I+ + V+ PL KQ S M I P++ +++EK+K Q+ ++AM + Sbjct: 43 LSIVGLVLIVRAALIPLFVKQIKSQRKMMEIAPELRKVQEKYKGKRDQLSREAMSRETMA 102 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF--T 475 LYK H P++ C P+L+Q+P+FFA++ V++ + A G + L T + Sbjct: 103 LYKKHGTTPVSSCLPLLVQMPIFFALFSVLN-DVSKHAASGVGGVGLLTPELTTEFYDAR 161 Query: 476 LFGILPFYL---------PGFMHVGIWPIIMSLSM----FIQMKM----SPPPADKGQA- 517 LF + ++ G + V I ++ L + F Q+++ P A GQA Sbjct: 162 LFDVASMHVNLVTAWNQPDGQVTVAILLTLVVLMIASQFFTQLQIISKNLSPEAKTGQAY 221 Query: 518 ----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++L +P+ F+F+ FP G++IYW SN+ ++VQQ V+++ Sbjct: 222 QMQKVMLYILPLAFIFSGVFFPLGVVIYWFVSNLWTMVQQFVVIR 266 >gi|315026681|gb|EFT38613.1| putative stage III sporulation protein J [Enterococcus faecalis TX2137] Length = 266 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 23/204 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ--- 409 F +L G+ GI I+L T+ ++++ PL Q S + +QP++ L++K+ P+ Sbjct: 41 FLSLGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQLKALQQKYSSKDPETQR 100 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + ++ +LY +N+NP GC P+L+Q+P+ A+Y+ IS E++ F W+ L D Sbjct: 101 LFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPELKEGTFM-WL-SLDKPD 158 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFV 528 P + ILP F + LS Q++ I+N+ MP + Sbjct: 159 P------YLILPILAAVFTFASTY-----LSSMSQLE------TNASLKIMNYVMPAMIF 201 Query: 529 FALSSFPAGLIIYWSWSNVISIVQ 552 F S + L +YW SN Q Sbjct: 202 FMGISLASSLSLYWVVSNAFQTGQ 225 >gi|332983465|ref|YP_004464906.1| membrane protein insertase, YidC/Oxa1 family [Mahella australiensis 50-1 BON] gi|332701143|gb|AEE98084.1| membrane protein insertase, YidC/Oxa1 family [Mahella australiensis 50-1 BON] Length = 238 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 110/224 (49%), Gaps = 24/224 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ + +VG++ AI++ T+ ++ + PL Q ST M IQPK+ EL +K+ + Sbjct: 8 ILEWINGMVGSYAYAIIIFTILIRTVLAPLDIMQRRSTQKMNAIQPKLKELEKKYGKDKQ 67 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP------FWGWI 462 ++ QK M +LY+ INPL GC P ++Q+ + F ++ VI + P + WI Sbjct: 68 KLQQKQM-ELYQKEKINPLGGCLPAIVQMVLLFMLFAVIRQLVGTPDNPGALVGQSFLWI 126 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK-------- 514 KD++ D + T G + Y I P + ++ ++ MK+S PP Sbjct: 127 KDISLPDAFWVTTKTGEINGYF-------ILPALSGITQYLYMKLSMPPQTSSAQQQNPM 179 Query: 515 --GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q + + P+ ++ S++ + +YW SN+ +V+ +I Sbjct: 180 GCSQETMNIFFPLFSLYITSTYASAFALYWVVSNIFQVVEFLII 223 >gi|220914666|ref|YP_002489975.1| hypothetical protein Achl_3934 [Arthrobacter chlorophenolicus A6] gi|219861544|gb|ACL41886.1| 60 kDa inner membrane insertion protein [Arthrobacter chlorophenolicus A6] Length = 324 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 25/222 (11%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 ++I+ + ++ P+ KQ + M+ +QP + +L++K+K Q+ ++AM Q Sbjct: 41 LSIIGLVLVIRAALIPVFVKQIKAQRGMQLLQPDLKKLQDKYKGKTDQLSRQAMAQEQMA 100 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIK--DLAAADPTNIF 474 +YK H NP + C P+L+Q+P FFA+++V+S IS + G + + D ++IF Sbjct: 101 MYKKHGTNPFSACLPMLIQMPFFFALFQVLSGISNNAKAGQGVGAMSHDQVVQFDESSIF 160 Query: 475 T--LFGILPFYLPGFMHVGIW--PIIMSLSM----FIQMK------MS----PPPADKGQ 516 L L G +W I+M L+M FI K MS P + Q Sbjct: 161 GAPLSASLLHGGGGGNQTAVWILSIVMILAMTASQFITQKQIMAKNMSEEAMASPFMRQQ 220 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M+L +P+VF +FP G++IYW+ +N+ ++ QQ +++ Sbjct: 221 KMMLYILPIVFGVGGINFPIGVLIYWTTTNLWTMGQQFFVIR 262 >gi|259502133|ref|ZP_05745035.1| stage III sporulation protein J [Lactobacillus antri DSM 16041] gi|259169946|gb|EEW54441.1| stage III sporulation protein J [Lactobacillus antri DSM 16041] Length = 281 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 105/219 (47%), Gaps = 23/219 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N G +G+ I++ T+ +++L PLA Q S M+ + P++ Sbjct: 41 WDHYIVYNFSQFIIWLSNHTGGYGMGIIIFTIIIRVLLLPLAFYQTKSMVRMQEVAPQLK 100 Query: 398 ELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++K+ + +Q+ +LYK ++P+A P+++Q+P+ +A+Y+ I + E+R Sbjct: 101 AIQKKYSSRDRDSMMKMQEETQKLYKEAGVHPMASMLPMIVQLPIMWALYQAIWRTPELR 160 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 H F W++ L DP + +LP F V W + M+ P Sbjct: 161 HGTFL-WLQ-LGHTDP------YYVLPVLAAVFTFVSSW-----------LSMASMPEKN 201 Query: 515 GQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ W MP++ F F + + +YW SN +VQ Sbjct: 202 SMTTMMTWFMPIMIFFMALGFSSAITLYWVVSNAFQVVQ 240 >gi|227518112|ref|ZP_03948161.1| stage III sporulation protein J precursor [Enterococcus faecalis TX0104] gi|229547133|ref|ZP_04435858.1| stage III sporulation protein J precursor [Enterococcus faecalis TX1322] gi|229550703|ref|ZP_04439428.1| stage III sporulation protein J precursor [Enterococcus faecalis ATCC 29200] gi|293382666|ref|ZP_06628594.1| stage III sporulation protein J [Enterococcus faecalis R712] gi|293387922|ref|ZP_06632458.1| stage III sporulation protein J [Enterococcus faecalis S613] gi|307268912|ref|ZP_07550276.1| putative stage III sporulation protein J [Enterococcus faecalis TX4248] gi|307274008|ref|ZP_07555218.1| putative stage III sporulation protein J [Enterococcus faecalis TX0855] gi|307276503|ref|ZP_07557623.1| putative stage III sporulation protein J [Enterococcus faecalis TX2134] gi|307284055|ref|ZP_07564225.1| putative stage III sporulation protein J [Enterococcus faecalis TX0860] gi|307287186|ref|ZP_07567257.1| putative stage III sporulation protein J [Enterococcus faecalis TX0109] gi|307296586|ref|ZP_07576406.1| putative stage III sporulation protein J [Enterococcus faecalis TX0411] gi|312901300|ref|ZP_07760583.1| putative stage III sporulation protein J [Enterococcus faecalis TX0470] gi|312908818|ref|ZP_07767757.1| putative stage III sporulation protein J [Enterococcus faecalis DAPTO 512] gi|312951724|ref|ZP_07770618.1| putative stage III sporulation protein J [Enterococcus faecalis TX0102] gi|312979540|ref|ZP_07791222.1| putative stage III sporulation protein J [Enterococcus faecalis DAPTO 516] gi|227074446|gb|EEI12409.1| stage III sporulation protein J precursor [Enterococcus faecalis TX0104] gi|229304136|gb|EEN70132.1| stage III sporulation protein J precursor [Enterococcus faecalis ATCC 29200] gi|229307715|gb|EEN73702.1| stage III sporulation protein J precursor [Enterococcus faecalis TX1322] gi|291079972|gb|EFE17336.1| stage III sporulation protein J [Enterococcus faecalis R712] gi|291082659|gb|EFE19622.1| stage III sporulation protein J [Enterococcus faecalis S613] gi|306495922|gb|EFM65510.1| putative stage III sporulation protein J [Enterococcus faecalis TX0411] gi|306501784|gb|EFM71075.1| putative stage III sporulation protein J [Enterococcus faecalis TX0109] gi|306503426|gb|EFM72675.1| putative stage III sporulation protein J [Enterococcus faecalis TX0860] gi|306506830|gb|EFM75980.1| putative stage III sporulation protein J [Enterococcus faecalis TX2134] gi|306509316|gb|EFM78376.1| putative stage III sporulation protein J [Enterococcus faecalis TX0855] gi|306514720|gb|EFM83271.1| putative stage III sporulation protein J [Enterococcus faecalis TX4248] gi|310625256|gb|EFQ08539.1| putative stage III sporulation protein J [Enterococcus faecalis DAPTO 512] gi|310630297|gb|EFQ13580.1| putative stage III sporulation protein J [Enterococcus faecalis TX0102] gi|311287722|gb|EFQ66278.1| putative stage III sporulation protein J [Enterococcus faecalis DAPTO 516] gi|311291677|gb|EFQ70233.1| putative stage III sporulation protein J [Enterococcus faecalis TX0470] gi|315030126|gb|EFT42058.1| putative stage III sporulation protein J [Enterococcus faecalis TX4000] gi|315033561|gb|EFT45493.1| putative stage III sporulation protein J [Enterococcus faecalis TX0017] gi|315036384|gb|EFT48316.1| putative stage III sporulation protein J [Enterococcus faecalis TX0027] gi|315143599|gb|EFT87615.1| putative stage III sporulation protein J [Enterococcus faecalis TX2141] gi|315148263|gb|EFT92279.1| putative stage III sporulation protein J [Enterococcus faecalis TX4244] gi|315151287|gb|EFT95303.1| putative stage III sporulation protein J [Enterococcus faecalis TX0012] gi|315153713|gb|EFT97729.1| putative stage III sporulation protein J [Enterococcus faecalis TX0031] gi|315155127|gb|EFT99143.1| putative stage III sporulation protein J [Enterococcus faecalis TX0043] gi|315158743|gb|EFU02760.1| putative stage III sporulation protein J [Enterococcus faecalis TX0312] gi|315165732|gb|EFU09749.1| putative stage III sporulation protein J [Enterococcus faecalis TX1302] gi|315168216|gb|EFU12233.1| putative stage III sporulation protein J [Enterococcus faecalis TX1341] gi|315170517|gb|EFU14534.1| putative stage III sporulation protein J [Enterococcus faecalis TX1342] gi|315174186|gb|EFU18203.1| putative stage III sporulation protein J [Enterococcus faecalis TX1346] gi|315573995|gb|EFU86186.1| putative stage III sporulation protein J [Enterococcus faecalis TX0309B] gi|315581946|gb|EFU94137.1| putative stage III sporulation protein J [Enterococcus faecalis TX0309A] gi|329576312|gb|EGG57827.1| putative stage III sporulation protein J [Enterococcus faecalis TX1467] Length = 266 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 23/204 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ--- 409 F +L G+ GI I+L T+ ++++ PL Q S + +QP++ L++K+ P+ Sbjct: 41 FLSLGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQLKALQQKYSSKDPETQR 100 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + ++ +LY +N+NP GC P+L+Q+P+ A+Y+ IS E++ F W+ L D Sbjct: 101 LFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPELKEGTFL-WL-SLDKPD 158 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFV 528 P + ILP F + LS Q++ I+N+ MP + Sbjct: 159 P------YLILPILAAVFTFASTY-----LSSMSQLE------TNASLKIMNYVMPAMIF 201 Query: 529 FALSSFPAGLIIYWSWSNVISIVQ 552 F S + L +YW SN Q Sbjct: 202 FMGISLASSLSLYWVVSNAFQTGQ 225 >gi|29377772|ref|NP_816926.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Enterococcus faecalis V583] gi|227555681|ref|ZP_03985728.1| stage III sporulation protein J precursor [Enterococcus faecalis HH22] gi|255971546|ref|ZP_05422132.1| preprotein translocase subunit YidC [Enterococcus faecalis T1] gi|255974519|ref|ZP_05425105.1| preprotein translocase subunit YidC [Enterococcus faecalis T2] gi|256618530|ref|ZP_05475376.1| preprotein translocase subunit YidC [Enterococcus faecalis ATCC 4200] gi|256761851|ref|ZP_05502431.1| preprotein translocase subunit YidC [Enterococcus faecalis T3] gi|256854978|ref|ZP_05560339.1| pheromone cCF10 percursor/lipoprotein [Enterococcus faecalis T8] gi|256957018|ref|ZP_05561189.1| preprotein translocase subunit YidC [Enterococcus faecalis DS5] gi|256960828|ref|ZP_05564999.1| preprotein translocase subunit YidC [Enterococcus faecalis Merz96] gi|256963980|ref|ZP_05568151.1| preprotein translocase subunit YidC [Enterococcus faecalis HIP11704] gi|257078696|ref|ZP_05573057.1| preprotein translocase subunit YidC [Enterococcus faecalis JH1] gi|257081344|ref|ZP_05575705.1| preprotein translocase subunit YidC [Enterococcus faecalis E1Sol] gi|257084001|ref|ZP_05578362.1| preprotein translocase subunit YidC [Enterococcus faecalis Fly1] gi|257417422|ref|ZP_05594416.1| preprotein translocase subunit YidC [Enterococcus faecalis AR01/DG] gi|257418845|ref|ZP_05595839.1| preprotein translocase subunit yidC [Enterococcus faecalis T11] gi|257421340|ref|ZP_05598330.1| pheromone lipoprotein [Enterococcus faecalis X98] gi|294781245|ref|ZP_06746592.1| putative stage III sporulation protein J [Enterococcus faecalis PC1.1] gi|300861757|ref|ZP_07107837.1| putative stage III sporulation protein J [Enterococcus faecalis TUSoD Ef11] gi|38502948|sp|Q82YV1|OXAA_ENTFA RecName: Full=Membrane protein oxaA; Flags: Precursor gi|29345240|gb|AAO82996.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Enterococcus faecalis V583] gi|227175191|gb|EEI56163.1| stage III sporulation protein J precursor [Enterococcus faecalis HH22] gi|255962564|gb|EET95040.1| preprotein translocase subunit YidC [Enterococcus faecalis T1] gi|255967391|gb|EET98013.1| preprotein translocase subunit YidC [Enterococcus faecalis T2] gi|256598057|gb|EEU17233.1| preprotein translocase subunit YidC [Enterococcus faecalis ATCC 4200] gi|256683102|gb|EEU22797.1| preprotein translocase subunit YidC [Enterococcus faecalis T3] gi|256709491|gb|EEU24538.1| pheromone cCF10 percursor/lipoprotein [Enterococcus faecalis T8] gi|256947514|gb|EEU64146.1| preprotein translocase subunit YidC [Enterococcus faecalis DS5] gi|256951324|gb|EEU67956.1| preprotein translocase subunit YidC [Enterococcus faecalis Merz96] gi|256954476|gb|EEU71108.1| preprotein translocase subunit YidC [Enterococcus faecalis HIP11704] gi|256986726|gb|EEU74028.1| preprotein translocase subunit YidC [Enterococcus faecalis JH1] gi|256989374|gb|EEU76676.1| preprotein translocase subunit YidC [Enterococcus faecalis E1Sol] gi|256992031|gb|EEU79333.1| preprotein translocase subunit YidC [Enterococcus faecalis Fly1] gi|257159250|gb|EEU89210.1| preprotein translocase subunit YidC [Enterococcus faecalis ARO1/DG] gi|257160673|gb|EEU90633.1| preprotein translocase subunit yidC [Enterococcus faecalis T11] gi|257163164|gb|EEU93124.1| pheromone lipoprotein [Enterococcus faecalis X98] gi|294451708|gb|EFG20163.1| putative stage III sporulation protein J [Enterococcus faecalis PC1.1] gi|300848282|gb|EFK76039.1| putative stage III sporulation protein J [Enterococcus faecalis TUSoD Ef11] gi|323479237|gb|ADX78676.1| inner membrane protein [Enterococcus faecalis 62] gi|327536429|gb|AEA95263.1| stage III sporulation protein J [Enterococcus faecalis OG1RF] Length = 275 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 23/204 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ--- 409 F +L G+ GI I+L T+ ++++ PL Q S + +QP++ L++K+ P+ Sbjct: 50 FLSLGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQLKALQQKYSSKDPETQR 109 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + ++ +LY +N+NP GC P+L+Q+P+ A+Y+ IS E++ F W+ L D Sbjct: 110 LFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPELKEGTFL-WL-SLDKPD 167 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFV 528 P + ILP F + LS Q++ I+N+ MP + Sbjct: 168 P------YLILPILAAVFTFASTY-----LSSMSQLE------TNASLKIMNYVMPAMIF 210 Query: 529 FALSSFPAGLIIYWSWSNVISIVQ 552 F S + L +YW SN Q Sbjct: 211 FMGISLASSLSLYWVVSNAFQTGQ 234 >gi|116672711|ref|YP_833644.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24] gi|116612820|gb|ABK05544.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24] Length = 324 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 115/222 (51%), Gaps = 26/222 (11%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 ++I+ + ++ P+ KQ + M+ +QP + +L++K+K Q+ ++AM Q Sbjct: 41 LSIIGLVLVIRAALIPVFVKQIKAQRGMQLLQPDLKKLQDKYKGKTDQLSRQAMAQEQMA 100 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWI--KDLAAADPTNIF 474 +YK H NP + C P+L+Q+P FFA+++V+S I+ G + + + D ++IF Sbjct: 101 MYKKHGTNPFSACLPMLIQMPFFFALFQVLSGITAARTKGAGIGAMSHEQVVQFDDSSIF 160 Query: 475 --TLFGILPFYLPGFMHVGIW--PIIMSLSM----FIQMK------MS----PPPADKGQ 516 TL L G +W I+M L+M FI K MS P + Q Sbjct: 161 GATLSASLLHGGAG-NQTAVWILSIVMILAMTASQFITQKQIMAKNMSEEAMASPFMRQQ 219 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M+L +PVVF +FP G++IYW+ +N+ ++ QQ +++ Sbjct: 220 KMMLYILPVVFGVGGINFPIGVLIYWTTTNLWTMAQQFFVIR 261 >gi|327314137|ref|YP_004329574.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola F0289] gi|326944441|gb|AEA20326.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola F0289] Length = 642 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 160/332 (48%), Gaps = 33/332 (9%) Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITILP--GKSIT 303 ++ W+ ++++++V I + ++ K D + Y + A+ T G+ + Sbjct: 257 DAMDWVAFKNQFFSAVMIARDNFAAGAKLKSTPLDKESHYLKHYEASMKTGFDPTGRHPS 316 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL------- 356 F F G +F + EK+ RF +D ++ P+F +++ ++ L Sbjct: 317 EFEFYF-GPNDFRLLQAVEKE---SRFGKDLDMQRLVYLGWPLFRIINRWFTLYVFDWLS 372 Query: 357 -VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKA 414 V G+ ++L T+ +KL+ +P+ KK Y+S+A M+ ++PK+DE +F K Q+A Sbjct: 373 KVFPMGVVLILITLLLKLITYPMVKKSYMSSAKMRVLKPKLDEATRQFNKPEDQMQKQQA 432 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT--- 471 M+Q Y + ++PL+GC P+L+Q+P++ A++ + ++++R F W+ DL+ DP Sbjct: 433 MMQKYAEYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGQSFL-WMDDLSTYDPIISW 491 Query: 472 --NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW----MPV 525 N++ + L L + G ++ S Q K Q ++ W MP+ Sbjct: 492 GHNLWLVGDHLS--LTCILFCGA-NLLYSWFTMQQQKDQMVGQQADQMKMMQWMMFAMPL 548 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 F F + + +GL Y+ +S+ A IM Sbjct: 549 FFFFMFNDYSSGLNFYY----FVSLFFSAAIM 576 >gi|257087831|ref|ZP_05582192.1| preprotein translocase subunit YidC [Enterococcus faecalis D6] gi|256995861|gb|EEU83163.1| preprotein translocase subunit YidC [Enterococcus faecalis D6] Length = 275 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 23/204 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ--- 409 F +L G+ GI I+L T+ ++++ PL Q S + +QP++ L++K+ P+ Sbjct: 50 FLSLGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQLKALQQKYSSKDPETQR 109 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + ++ +LY +N+NP GC P+L+Q+P+ A+Y+ IS E++ F W+ L D Sbjct: 110 LFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPELKEGTFM-WL-SLDKPD 167 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFV 528 P + ILP F + LS Q++ I+N+ MP + Sbjct: 168 P------YLILPILAAVFTFASTY-----LSSMSQLE------TNASLKIMNYVMPAMIF 210 Query: 529 FALSSFPAGLIIYWSWSNVISIVQ 552 F S + L +YW SN Q Sbjct: 211 FMGISLASSLSLYWVVSNAFQTGQ 234 >gi|289806524|ref|ZP_06537153.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 98 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 53/75 (70%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A Sbjct: 24 PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMA 83 Query: 388 NMKNIQPKIDELREK 402 M+ +QPKI +RE+ Sbjct: 84 KMRMLQPKIQAMRER 98 >gi|271970552|ref|YP_003344748.1| Preprotein translocase subunit YidC-like protein [Streptosporangium roseum DSM 43021] gi|270513727|gb|ACZ92005.1| Preprotein translocase subunit YidC-like protein [Streptosporangium roseum DSM 43021] Length = 316 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 37/223 (16%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 + + I+ TV ++LL FPL KQ S+ M+ + PK+ ELR+++K ++ Q+ M L Sbjct: 35 TWALTIITLTVLMRLLIFPLFLKQMRSSKKMQELAPKVQELRKRYKNDKQRMNQEVM-AL 93 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISI----------------SLEMRH------- 455 Y+ NPL GC PI+ Q P+F +++ V+ S H Sbjct: 94 YQGQGANPLGGCLPIVAQFPIFISMFTVLQAMANGQLKFGMTQHLVDSARAAHIFGAPLP 153 Query: 456 APFWGWIKDL--AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 A FW D+ ADP + I F+ + +++ + M+ P + Sbjct: 154 ATFWTSSADIIKLGADPVVTKVVLAI-------FVAISSLTTFLTVRQSVTRSMAQMPDN 206 Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + Q +++ P+ +F+L +FP GLI+YW +N+ ++ QQ Sbjct: 207 PMAQQQKILMYISPLFAIFSL-NFPLGLILYWVTTNLWTLGQQ 248 >gi|125718923|ref|YP_001036056.1| membrane protein (preprotein translocase) oxaA 1 precursor [Streptococcus sanguinis SK36] gi|323350582|ref|ZP_08086244.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis VMC66] gi|125498840|gb|ABN45506.1| Membrane protein (preprotein translocase) oxaA 1 precursor, putative [Streptococcus sanguinis SK36] gi|322123264|gb|EFX94949.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis VMC66] gi|324992539|gb|EGC24460.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK405] gi|324995932|gb|EGC27843.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK678] gi|325697377|gb|EGD39263.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK160] gi|327488846|gb|EGF20645.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK1058] Length = 271 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 23/208 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I L+EK+ Sbjct: 47 FLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESRT 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L + +LYK +NP A P+ +Q+PV A+++ ++ M+ F W+ +L A D Sbjct: 107 ALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDFMKTGHFL-WL-NLGATD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV-FV 528 PT I L L F W +L P + G +++ MPVV F Sbjct: 165 PTFILPLLAAL------FTFFSTWLSNKAL----------PERNGGMTVMMYLMPVVIFF 208 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 FAL + +G+ +YW+ SN +VQ ++ Sbjct: 209 FALYA-ASGVALYWAVSNAYQVVQTLLL 235 >gi|110741684|dbj|BAE98788.1| hypothetical protein [Arabidopsis thaliana] Length = 302 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 10/143 (6%) Query: 338 WFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WF IA M ++ + + ++G AI+L TV VK FPL KKQ S MK+ Sbjct: 96 WFSGIANYMETILKVLKDGLSTVHVPYSYGFAIILLTVLVKAATFPLTKKQVESAMAMKS 155 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-IS 450 + P+I ++E++ ++ Q +LYK INPLAGC P L IPV+ +Y+ +S ++ Sbjct: 156 LTPQIKAIQERYAGDQEKI-QLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 214 Query: 451 LEMRHAPFWGWIKDLAAADPTNI 473 E + WI LA PT + Sbjct: 215 DEGLLTEGFFWIPSLAG--PTTV 235 >gi|322412738|gb|EFY03646.1| hypothetical protein SDD27957_10315 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 269 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 102/201 (50%), Gaps = 27/201 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G+ G+ I+L T+ ++LL PL Q S+ M++IQP++ EL++K+ + K + Sbjct: 51 GSIGVGIILFTLIIRLLLMPLFNMQIRSSQKMQDIQPELRELQKKYAGKDTETRMKLAEE 110 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK + +NP A P+L+Q+PV A+++ ++ ++ F W+ +LA D Sbjct: 111 SQALYKKYGVNPYASLMPLLIQMPVMIALFQALTRVPFLKTGTFL-WV-ELAQHD----- 163 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWMPVVFVFAL 531 H+ I P++ +L F+ ++ A + M ++ MP++ F Sbjct: 164 --------------HLYILPVLAALFTFLSTWLTNLAAREKNIMMTIMIYVMPLMIFFMG 209 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 + +G+++YW+ SN +VQ Sbjct: 210 FTLASGVVLYWTVSNAFQVVQ 230 >gi|251783353|ref|YP_002997658.1| membrane protein oxaA 1 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391985|dbj|BAH82444.1| membrane protein oxaA 1 precursor [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 271 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 102/201 (50%), Gaps = 27/201 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G+ G+ I+L T+ ++LL PL Q S+ M++IQP++ EL++K+ + K + Sbjct: 53 GSIGVGIILFTLIIRLLLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTETRMKLAEE 112 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK + +NP A P+L+Q+PV A+++ ++ ++ F W+ +LA D Sbjct: 113 SQALYKKYGVNPYASLMPLLIQMPVMIALFQALTRVPFLKTGTFL-WV-ELAQHD----- 165 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWMPVVFVFAL 531 H+ I P++ +L F+ ++ A + M ++ MP++ F Sbjct: 166 --------------HLYILPVLAALFTFLSTWLTNLAAREKNIMMTIMIYVMPLMIFFMG 211 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 + +G+++YW+ SN +VQ Sbjct: 212 FTLASGVVLYWTVSNAFQVVQ 232 >gi|256398143|ref|YP_003119707.1| hypothetical protein Caci_9053 [Catenulispora acidiphila DSM 44928] gi|256364369|gb|ACU77866.1| 60 kDa inner membrane insertion protein [Catenulispora acidiphila DSM 44928] Length = 328 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 42/225 (18%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ T+ ++ PL +KQ S NM+ +QP+I L++K+K Q LQ+ M++LYK Sbjct: 38 LAIIFLTITIRAAMIPLFRKQIKSMQNMQRLQPQIQALQKKYKLDK-QKLQQEMMKLYKD 96 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF--TLFGI 479 + +P A C PILLQ P F +Y+V+S H + L+ +D + + FG Sbjct: 97 NGTSPFASCMPILLQTPFFMGLYRVLS------HVSAGNAVGALSQSDSVSAMHASFFGA 150 Query: 480 LPFYLPGFMH--------VGIWPII------------MSLSMFIQMKMS----------- 508 P L F+H +G+ + + S F+ +M Sbjct: 151 -PLSL-SFLHHTPAQMSRIGVTSVTNLQIIAIIMAIIYATSQFLTQRMMMAKNTNLDNSV 208 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P P + Q ++L MP +F + G+++Y +NV +I QQ Sbjct: 209 PNPMMQSQKIMLYVMPFGMLFFSLNVQIGVVLYLMTTNVWTIGQQ 253 >gi|323128077|gb|ADX25374.1| hypothetical protein SDE12394_09760 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 269 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 102/201 (50%), Gaps = 27/201 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G+ G+ I+L T+ ++LL PL Q S+ M++IQP++ EL++K+ + K + Sbjct: 51 GSIGVGIILFTLIIRLLLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTETRMKLAEE 110 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK + +NP A P+L+Q+PV A+++ ++ ++ F W+ +LA D Sbjct: 111 SQALYKKYGVNPYASLMPLLIQMPVMIALFQALTRVPFLKTGTFL-WV-ELAQHD----- 163 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWMPVVFVFAL 531 H+ I P++ +L F+ ++ A + M ++ MP++ F Sbjct: 164 --------------HLYILPVLAALFTFLSTWLTNLAAREKNIMMTIMIYVMPLMIFFMG 209 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 + +G+++YW+ SN +VQ Sbjct: 210 FTLASGVVLYWTVSNAFQVVQ 230 >gi|282858213|ref|ZP_06267403.1| preprotein translocase subunit YidC [Pyramidobacter piscolens W5455] gi|282583944|gb|EFB89322.1| preprotein translocase subunit YidC [Pyramidobacter piscolens W5455] Length = 308 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 28/231 (12%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F +++ Y++ GN+G AI+ TV V+L PL KQ S M+ +QP++ L+EK+ Sbjct: 9 LFQFLNFLYSMTGNWGWAIVALTVIVRLALHPLNAKQMRSMQQMQRLQPRLKVLQEKYAN 68 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPFWG---- 460 L + + LYK + +NP +GC P+++Q+P+ ++ V+ S + + F G Sbjct: 69 D-RDTLSRETMALYKENKVNPASGCLPLIIQLPILILLFNVLRDASAQFGESTFCGVPLA 127 Query: 461 --WIKDLAAA-----DP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI----- 503 + +A A DP + G P G VG+W I L +FI Sbjct: 128 GTVLSSIAKAVGFSGDPLTAGFMDTCRAVGANP---AGLSAVGVWLPITFLLLFIVFLTW 184 Query: 504 -QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 Q K+S + A + MP+ F S P GL++YW S++ +++QQ Sbjct: 185 YQQKLS-AQGNPQMATMNVVMPIFMGFICLSMPGGLLLYWMLSSLFAVIQQ 234 >gi|239980791|ref|ZP_04703315.1| putative inner membrane protein translocase component YidC [Streptomyces albus J1074] Length = 414 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 107/234 (45%), Gaps = 48/234 (20%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G++I+ + +++ PL KQ +T M+ +QP++ +++E++K Q + M++LYK Sbjct: 22 GLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDK-QRQSEEMMKLYK 80 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVIS----------------ISLEMRH---APFWGW 461 NPLA C PILLQ P FFA+Y V++ S + H AP Sbjct: 81 DAGTNPLASCLPILLQSPFFFALYHVLNSIASNKTIGFIDEALLASAQKAHIVGAPLAAK 140 Query: 462 IKDLA------AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-------- 507 D A + TN+ + ++ ++MS S F + Sbjct: 141 FTDNADKIEALGSSTTNVHIVTAVM-------------IVLMSASQFFTQRQLMTKNVDT 187 Query: 508 -SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P + Q M++ P++F +FP G+++YW +N+ ++ QQ +++ + Sbjct: 188 TVKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLVYWLTTNMWTMGQQMYVIRQN 241 >gi|325686634|gb|EGD28660.1| stage III sporulation protein J [Streptococcus sanguinis SK72] Length = 271 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 23/208 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I +L+EK+ Sbjct: 47 FLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESRT 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L + +LYK INP A P+ +Q+PV A+++ ++ M+ F W+ +L A D Sbjct: 107 ALAEETQKLYKEKGINPYASFIPLFIQMPVLLALFQALTRVDFMKTGHFL-WL-NLGATD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV-FV 528 PT I L L F W +L P + G +++ MPVV F Sbjct: 165 PTFILPLLAAL------FTFFSTWLSNKAL----------PERNGGMTVMMYLMPVVIFF 208 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 FAL + +G+ +YW+ SN +VQ ++ Sbjct: 209 FALYA-ASGVALYWAVSNAYQVVQTLLL 235 >gi|327460763|gb|EGF07098.1| stage III sporulation protein J [Streptococcus sanguinis SK1] gi|328944626|gb|EGG38787.1| stage III sporulation protein J [Streptococcus sanguinis SK1087] Length = 271 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 23/208 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I +L+EK+ Sbjct: 47 FLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESRT 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L + +LYK +NP A P+ +Q+PV A+++ ++ M+ F W+ +L A D Sbjct: 107 ALAEETQKLYKEMGVNPYASFIPLFIQMPVLLALFQALTRVDFMKTGHFL-WL-NLGATD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFV 528 PT I L L F W +L P + G +++ MPV +F Sbjct: 165 PTFILPLLAAL------FTFFSTWLSNKAL----------PERNGGMTVMMYLMPVMIFF 208 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 FAL + +G+ +YW+ SN +VQ ++ Sbjct: 209 FALYA-ASGVALYWAVSNAYQVVQTLLL 235 >gi|255527590|ref|ZP_05394454.1| 60 kDa inner membrane insertion protein [Clostridium carboxidivorans P7] gi|296186788|ref|ZP_06855189.1| stage III sporulation protein J family protein [Clostridium carboxidivorans P7] gi|255508723|gb|EET85099.1| 60 kDa inner membrane insertion protein [Clostridium carboxidivorans P7] gi|296048502|gb|EFG87935.1| stage III sporulation protein J family protein [Clostridium carboxidivorans P7] Length = 219 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 21/202 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++GIAI+L T+ ++++ PL KQ S+ M +QP+ +++EK+K + PQ Q+ M++L Sbjct: 29 SYGIAIILVTLIIRIILLPLNIKQTKSSLVMSELQPETKKIQEKYK-NDPQRAQQEMMKL 87 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +PL+GC P+L+Q P+F A+Y V + +L + WI DL D + Sbjct: 88 YKEKGASPLSGCLPMLIQWPIFIALYYVFN-NLHGIDGVHFLWISDLGKRDI--FLAILS 144 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN-WMPVVFVFALSSFPAG 537 L Y G + M MS A Q+ +N M + VF S + Sbjct: 145 GLTTYFSGSL----------------MMMSGDSAQAKQSTTMNVGMSIFMVFISWSLKSA 188 Query: 538 LIIYWSWSNVISIVQQAVIMKM 559 L++YW +N I I Q V+ K+ Sbjct: 189 LVLYWVVNNSIQIAQTLVMKKV 210 >gi|325695448|gb|EGD37348.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK150] Length = 271 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 21/207 (10%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I +L+EK+ Sbjct: 47 FLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESRT 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L + +LYK +NP A P+ +Q+PV A+++ ++ M+ F W+ +L A D Sbjct: 107 ALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDFMKTGHFL-WL-NLGATD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT I L L F W +L P + G +++ MPVV F Sbjct: 165 PTFILPLLAAL------FTFFSTWLSNKAL----------PERNGGMTVMMYLMPVVIFF 208 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 +G+ +YW+ SN +VQ ++ Sbjct: 209 FAFYAASGVALYWAVSNAYQVVQTLLL 235 >gi|289434661|ref|YP_003464533.1| SpoJ family translocase subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170905|emb|CBH27447.1| SpoJ family translocase subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 275 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 126/261 (48%), Gaps = 37/261 (14%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G+F ++ +P + + + VG N+G+AI++TT+ ++ L PL AK Q + M Sbjct: 32 GFFSTYLIQPFTSFIMFVASFVGDNYGVAIIITTLIIRALIMPLNMRTAKAQMGMQSKMA 91 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYK 445 +P+IDE++ + K++ + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y Sbjct: 92 VAKPEIDEIQARLKRATSKEEQATIQKEMMTVYSKYNINPMQMGCLPLLIQMPILMAFYY 151 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ F W +L + D M + + ++ L+ + Sbjct: 152 AIRGSSEIASHSFL-WF-NLGSPD------------------MVLAVIAGLVYLAQYFVS 191 Query: 506 KMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVI----SIVQQAVIMKMH 560 + P K Q I+ M P++ +F + P+ L +YW+ + +++ + + M H Sbjct: 192 MIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH 251 Query: 561 GAEIGLIDRLRSTFSKNYNSQ 581 E+ ++++ F + Q Sbjct: 252 -PEVKIMEQEEKEFEQIVEEQ 271 >gi|17230907|ref|NP_487455.1| putative inner membrane protein translocase component YidC [Nostoc sp. PCC 7120] gi|38503115|sp|Q8YRM9|OXAA_ANASP RecName: Full=Inner membrane protein oxaA gi|17132548|dbj|BAB75114.1| alr3415 [Nostoc sp. PCC 7120] Length = 380 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 76/131 (58%), Gaps = 12/131 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY++V ++G+AI+ T+ ++ +PL+ Q + M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P ++ E++E++K PQ Q+ M+ + K NPLAGC P+LLQ+PV A++ Sbjct: 61 PLMQKRMAEIKERYKDD-PQKQQEEMMNVQKEFG-NPLAGCLPLLLQMPVLLALFAT--- 115 Query: 450 SLEMRHAPFWG 460 +R +PF G Sbjct: 116 ---LRGSPFAG 123 >gi|315303048|ref|ZP_07873756.1| membrane protein OxaA 2 [Listeria ivanovii FSL F6-596] gi|313628583|gb|EFR97008.1| membrane protein OxaA 2 [Listeria ivanovii FSL F6-596] Length = 275 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 32/236 (13%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G+F ++ +P + + + VG N+G+AI++TT+ ++ L PL AK Q + M Sbjct: 32 GFFSTYLIQPFTSFIMFVASFVGDNYGVAIIITTLLIRALIMPLNLRTAKAQMGMQSKMA 91 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYK 445 +P+IDE++ + K++ + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y Sbjct: 92 VAKPEIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYY 151 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ F W +L + D M + I ++ L+ + Sbjct: 152 AIRGSSEIASHTFL-WF-NLGSPD------------------MVLAIIAGLVYLAQYFVS 191 Query: 506 KMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + P K Q I+ M P++ +F + P+ L +YW+ + Q + K++ Sbjct: 192 MIGYSPEQKKQMRIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLY 247 >gi|229544288|ref|ZP_04433347.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1] gi|229325427|gb|EEN91103.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1] Length = 258 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 34/212 (16%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 L G++GIAI++ T+ ++L+ P KKQ + MK ++P++D+L+ K K + + Sbjct: 53 LHGDYGIAIIVLTLIIRLILMPFMLHTFKKQQIMQDKMKVLKPEMDKLQTKIKAAKTKEE 112 Query: 410 --VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEM-RHAPFWGWIKDL 465 LQ+ M+ LY+ H +NPL GC PI++Q+P+ Y I S E+ H+ W +L Sbjct: 113 QAKLQQEMMGLYQKHGVNPLNMGCLPIIIQMPILMGFYYAIRGSKEIATHSFLWF---NL 169 Query: 466 AAAD-PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM- 523 D P I L G++ F +GI P K Q + M Sbjct: 170 GQTDIPMAI--LAGVIYFIQAQISLIGI-----------------PEEQKKQMKYMMLMS 210 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P++ +F S PA L +YW+ S + I Q + Sbjct: 211 PIMILFVSFSAPAVLPLYWTVSGLFMIGQTLI 242 >gi|229496606|ref|ZP_04390320.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406] gi|229316503|gb|EEN82422.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406] Length = 620 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 87/359 (24%), Positives = 158/359 (44%), Gaps = 59/359 (16%) Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 ++ SD + S +E SW+ DK+++SV+I +F S S+ Sbjct: 230 ERLSD-KGSKSEKVNERISWIAFKDKFFSSVWIADAANAFES----------------SS 272 Query: 292 NEITILPGKSITT------TNFLFAGAKEF---------PTIHHYEK--DLAIPRFEMLI 334 E T++P T T+F F+ A++ P HH K D I + Sbjct: 273 LEQTVMPKDGEYTKDCKVVTSFPFSNAQDASAHFTLYMGPLEHHLLKAYDQGIEEDGDRL 332 Query: 335 DWGWFYFIAKPMFM---------LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 ++ +F ++ + + N+G+ I+L T+ +K PL K Y+S Sbjct: 333 HLEHLVYVGGSVFRWLNVHLIIPIVDFLSKYISNWGLIILLLTLIIKTALSPLTFKSYMS 392 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFA 442 A M+ ++P+I + +K+ ++ K + LYK +P++GC P+LLQ+P + Sbjct: 393 QAKMRVLKPQIQAINDKYPGQEQAMMMKRSQETMALYKQAGASPMSGCLPMLLQMPFLIS 452 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIM 497 +Y ++ +R F W +DL+ D +I L G++ +L F +W + Sbjct: 453 LYMFFPTAIALRGESFL-WAQDLSTYDAVISWNFDIPILSGLMGNHLSLF--CLLWAVTN 509 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIVQ 552 L M MS D Q ++ +MP ++F F ++ +GL Y+ S +I+I+Q Sbjct: 510 ILYSRYTMNMS-ATGDNQQMKMMKYMPYIMSIMFFFFFNNNASGLCYYYFISTLITILQ 567 >gi|167748061|ref|ZP_02420188.1| hypothetical protein ANACAC_02805 [Anaerostipes caccae DSM 14662] gi|317472414|ref|ZP_07931739.1| YidC/Oxa1 family membrane protein insertase [Anaerostipes sp. 3_2_56FAA] gi|167652053|gb|EDR96182.1| hypothetical protein ANACAC_02805 [Anaerostipes caccae DSM 14662] gi|316900134|gb|EFV22123.1| YidC/Oxa1 family membrane protein insertase [Anaerostipes sp. 3_2_56FAA] Length = 331 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 34/228 (14%) Query: 349 LMSYFYN---LVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +M + YN VG N G+ I+L T+ KL+ FPL KQ S + QP++ ++++K+ Sbjct: 26 IMKWIYNGLSAVGIENLGLCIILFTLISKLIIFPLTIKQQRSMKINQVAQPEMMKIQKKY 85 Query: 404 KQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 + Q Q+ M ++Y + +P GC L+Q P+ A+Y V+ +LE Sbjct: 86 RGKRDQASMMKQQEEMQKVYDKYGTSPTGGCATTLIQFPIIMALYYVVR-NLE------- 137 Query: 460 GWIKDLAAADPTNIFT-LFGILPFYLPGFMHVGIWPIIMSLSMFIQ----------MKMS 508 G+I ++ P + + + GI PGF + I+ II LS F Q M Sbjct: 138 GYIPNI----PKSAYEFVLGINIQNTPGF-KLSIYLIIPLLSAFFQYLSARTSMADMDSD 192 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P A + M+L MP++ +F + P G+ IYW+ S V VQQ +I Sbjct: 193 NPAAGMSKNMML-MMPIMSLFMCITLPVGIGIYWTASAVFQWVQQILI 239 >gi|75909641|ref|YP_323937.1| putative inner membrane protein translocase component YidC [Anabaena variabilis ATCC 29413] gi|75703366|gb|ABA23042.1| 60 kDa inner membrane insertion protein [Anabaena variabilis ATCC 29413] Length = 380 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 76/131 (58%), Gaps = 12/131 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY++V ++G+AI+ T+ ++ +PL+ Q + M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P ++ E++E++K PQ Q+ M+ + K NPLAGC P+LLQ+PV A++ Sbjct: 61 PLMQKRMAEIKERYKDD-PQKQQEEMMNVQKEFG-NPLAGCLPLLLQMPVLLALFAT--- 115 Query: 450 SLEMRHAPFWG 460 +R +PF G Sbjct: 116 ---LRGSPFAG 123 >gi|288802342|ref|ZP_06407782.1| inner membrane protein OxaA [Prevotella melaninogenica D18] gi|288335309|gb|EFC73744.1| inner membrane protein OxaA [Prevotella melaninogenica D18] Length = 643 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 85/337 (25%), Positives = 158/337 (46%), Gaps = 49/337 (14%) Query: 250 SWLGISDKYWASVFIPS---------KETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 W+ ++++++V I K T YL A +A F GK Sbjct: 260 DWVAFKNQFFSAVMIAKDNFATGAKLKSTPLEKSSHYLKHYEANMKAGFDPT------GK 313 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL---- 356 + F F G +F + E + +F +D ++ P+F +++ ++ L Sbjct: 314 RPSEFEFYF-GPNDFRLLQSVETE---SKFAKELDMERLVYLGWPLFRIINRWFTLYVFD 369 Query: 357 ----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVL 411 V G+ ++L T+ +KL+ FP+ KK Y+S+A M+ ++PK+DE ++F K Sbjct: 370 WLSKVFPMGVVLILITLLLKLITFPMVKKSYMSSAKMRVLKPKLDEATKQFNKPEDQMQK 429 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+AM+Q Y + ++PL+GC P+L+Q+P++ A++ + ++++R F W+ DL+ DP Sbjct: 430 QQAMMQKYSEYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGQSFL-WMHDLSTFDP- 487 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-------QMKMSPPPADKGQAMILNW-- 522 IF+ + +L G H+ + I+ + + Q K Q ++ W Sbjct: 488 -IFSWNHDV--WLVG-DHISLTCILFCGANLLYTWFTMQQQKDQMVGQQADQMKMMQWMM 543 Query: 523 --MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 MP+ F F + + +GL Y+ IS+ A IM Sbjct: 544 FGMPLFFFFMFNDYSSGLNFYY----FISLFFSAAIM 576 >gi|239941533|ref|ZP_04693470.1| hypothetical protein SrosN15_11094 [Streptomyces roseosporus NRRL 15998] gi|239987998|ref|ZP_04708662.1| hypothetical protein SrosN1_11878 [Streptomyces roseosporus NRRL 11379] Length = 256 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 51/225 (22%) Query: 346 MFMLMSYFYNLVGNFG-------------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 M MS F +LVG+ AI+L T V+L PL++ + Sbjct: 1 MSAFMSAFASLVGSLADLLQPLFQTASTAAAIILFTALVRLAVHPLSRAAARGQKARSRL 60 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---- 448 QP+I ELR+K ++P + +QKA+++L+ ++PL+GC P LLQ+P FF +Y + S Sbjct: 61 QPQIAELRKKHGRNP-ERMQKAIMELHAAEKVSPLSGCLPSLLQMPAFFLLYHLFSSSSI 119 Query: 449 -------ISLEMRHAPFWG-WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +S ++ AP G W LA PF G +++G++ I+ +++ Sbjct: 120 GGEPNALLSHDLLGAPLGGRWHDALAHGG-----------PFGGQGLVYLGLFVIVAAVA 168 Query: 501 MFI------QMK---MSPPPADKGQ-----AMILNWMPVVFVFAL 531 F QM M+P GQ + MP++ F L Sbjct: 169 TFSYGRTKRQMAANPMTPAAGPDGQPVPGMGAMTKLMPLLSFFTL 213 >gi|256833763|ref|YP_003162490.1| 60 kDa inner membrane insertion protein [Jonesia denitrificans DSM 20603] gi|256687294|gb|ACV10187.1| 60 kDa inner membrane insertion protein [Jonesia denitrificans DSM 20603] Length = 315 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 72/251 (28%), Positives = 117/251 (46%), Gaps = 38/251 (15%) Query: 334 IDWG--WFYFIAKPMFMLMSYFYNLVGNFGIAIMLT----TVFVKLLFFPLAKKQYVSTA 387 I+W W ++ F+ F L G+A +L T+ +++L PL KQ ++ Sbjct: 10 IEWAVAWIMYLCHTFFV----FLGLPDGSGVAWILAVVGLTIVIRVLIIPLFFKQIKASR 65 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGCWPILLQIPVFFAI 443 M+ IQP++ +++K+K ++AM + LY H NPLA C PILLQ P+FF + Sbjct: 66 AMQMIQPELQAIQKKYKNKTDPASREAMGRETMALYSKHGTNPLASCMPILLQTPIFFGL 125 Query: 444 YKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP-------- 494 ++V++ E+ G I A N LFG F+H P Sbjct: 126 FRVLNGLDEIAAGGSAIGPINTEVATQIEN-SQLFGA--SLSSTFLHEPTDPNTKIVSAV 182 Query: 495 --IIMSLSMFI-----QMKMSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYW 542 ++M +++I MK P A +G Q ++L +P + + +FP G++IYW Sbjct: 183 LIVLMCATLYITQRQLTMKNMPASAMQGPMAQTQKIMLYLIPGMMAVSGVNFPIGVLIYW 242 Query: 543 SWSNVISIVQQ 553 SN+ S QQ Sbjct: 243 VVSNLWSTGQQ 253 >gi|332358080|gb|EGJ35912.1| stage III sporulation protein J [Streptococcus sanguinis SK49] Length = 271 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 23/208 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I +L+EK+ Sbjct: 47 FLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESRT 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L + +LYK +NP A P+ +Q+PV A+++ ++ M+ F W+ +L A D Sbjct: 107 ALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDFMKTGHFL-WL-NLGATD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV-FV 528 PT I L L F W +L P + G +++ MPVV F Sbjct: 165 PTFILPLLAAL------FTFFSTWLSNKAL----------PERNGGMTVMMYLMPVVIFF 208 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 FAL + +G+ +YW+ SN +VQ ++ Sbjct: 209 FALYA-ASGVALYWAVSNAYQVVQTLLL 235 >gi|330468742|ref|YP_004406485.1| 60 kDa inner membrane insertion protein [Verrucosispora maris AB-18-032] gi|328811713|gb|AEB45885.1| 60 kDa inner membrane insertion protein [Verrucosispora maris AB-18-032] Length = 300 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 30/224 (13%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 + I+ + V+ + FP+ KQ + M+ +QP+I L+EK K + LQK +++LY+ Sbjct: 45 LGIVFLVLTVRAVLFPVFVKQIKAQRAMQALQPQIKALQEKHKDDR-ETLQKELVELYRA 103 Query: 422 HNINPLAGCWPILLQIPVFFAIYKV---ISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 NPL GC P+L+QIPVF ++ V + S+ +GW + D + TLFG Sbjct: 104 GQANPLMGCLPMLVQIPVFLGLFHVLRHLKPSMPEHMKTLYGW--TVTQFDSASTATLFG 161 Query: 479 --ILPFYLPGFMHV--------------GIWPIIM-------SLSMFIQMKMSPPPADK- 514 I + G + I +IM S M ++ + P K Sbjct: 162 APIAANFRSGTQELALLGADGVTVRVVAAILIVIMIATTYLSSRQMILRTGWAEDPQQKM 221 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q ++L +P+ + + FP G+IIYW +N+ S+ QQ +++ Sbjct: 222 MQRLMLYGIPLSLLVSGLIFPIGVIIYWVTTNLFSLGQQTWVLR 265 >gi|328774396|gb|EGF84433.1| hypothetical protein BATDEDRAFT_34302 [Batrachochytrium dendrobatidis JAM81] Length = 459 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 36/205 (17%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ-------SPPQVLQKAMI 416 I+ T+ V+++ PLA K V+ A + ++PK D ++++ + Q + + Sbjct: 210 IVALTIIVRIIVAPLAIKAQVAGAVLGGLRPKTDPIQKRVTHLRSIGDTAGSQREAQKLF 269 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF----WGWIKDLAAADPTN 472 Q+YK +NI+PL+ W I +Q P+F +++ I E+ F +GWI +L+ ADPT Sbjct: 270 QVYKDNNISPLSIGWGI-IQAPIFISVFMAIKYMAELPVPGFTTGGFGWITNLSTADPTY 328 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPADKGQAMILNWMPVVF 527 I PI+ S+ M I M+ SP PP MI+ VV Sbjct: 329 IL-------------------PILSSIGMLITMEYSPKLTGSPPQSAMILMIMRVASVVM 369 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQ 552 + + P + IY S V+ I Q Sbjct: 370 IPVMGGLPVAVFIYMLVSTVLMIAQ 394 >gi|294629545|ref|ZP_06708105.1| preprotein translocase YidC subunit [Streptomyces sp. e14] gi|292832878|gb|EFF91227.1| preprotein translocase YidC subunit [Streptomyces sp. e14] Length = 242 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 22/151 (14%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L T V+LL PL++ ++P+I ELREK ++P + LQKA+++L+ Sbjct: 30 AIVLFTACVRLLVHPLSRAAVRGQKAQAALRPRIAELREKHAKNPGR-LQKALVELHAEE 88 Query: 423 NINPLAGCWPILLQIPVFFAIYKVIS-----------ISLEMRHAPFWGWIKDLAAADPT 471 ++PL+GC P LLQ+P FF +Y + S +S + AP G D A AD Sbjct: 89 KVSPLSGCLPNLLQLPAFFLLYHLFSSTAIGGDGNGLLSHRLFAAPLGGRWSD-ALAD-G 146 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +F GI ++VG++ ++ +++ F Sbjct: 147 GVFGAAGI--------VYVGLFAVVAAVATF 169 >gi|256786609|ref|ZP_05525040.1| putative inner membrane protein translocase component YidC [Streptomyces lividans TK24] gi|289770501|ref|ZP_06529879.1| membrane protein oxaA [Streptomyces lividans TK24] gi|289700700|gb|EFD68129.1| membrane protein oxaA [Streptomyces lividans TK24] Length = 431 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/285 (23%), Positives = 129/285 (45%), Gaps = 50/285 (17%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITWPVSWVIVQFHTVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRGM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS- 448 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNG 126 Query: 449 ---------------ISLEMRH---APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 S + H AP D A+ + +L + + Sbjct: 127 IASGDTIGKINQPLLESAQKAHIFGAPLAAKFTDGASKVESLGASLTDVR-------VIT 179 Query: 491 GIWPIIMSLSMFIQMKM---------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 + ++MS S F + P + Q M++ PV+F +FP G+++Y Sbjct: 180 AVMIVLMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVY 239 Query: 542 WSWSNVISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYNSQ 581 W +NV ++ QQ +++ + A+ ++RL + +++ ++ Sbjct: 240 WLTTNVWTMGQQMYVIRNNPTPGSKAQASYLERLHKSVTEHGRTR 284 >gi|229822696|ref|YP_002884222.1| 60 kDa inner membrane insertion protein [Beutenbergia cavernae DSM 12333] gi|229568609|gb|ACQ82460.1| 60 kDa inner membrane insertion protein [Beutenbergia cavernae DSM 12333] Length = 382 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 26/207 (12%) Query: 381 KQYVSTANMKNIQPKIDELREKFK-QSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQ 436 +Q ++ ++ +QP+I +L++K+K ++ P Q +Q+ M+ +Y+ NP A C PIL Q Sbjct: 60 RQIRASRGLQIVQPEIQKLQKKYKGKTDPASRQAMQQEMMAIYREAGTNPFASCLPILAQ 119 Query: 437 IPVFFAIYKVISISLEMRHAPFWG------WIKDLAA-ADPTNIFTLFGILPFYLPGFMH 489 PVFFA+++V++ SL + +G +++AA A+ + F F + Sbjct: 120 SPVFFALFRVLA-SLPALASGDYGRPSIGPLTQEIAAEAEQSTFFGAQLSQTFMSSDDVQ 178 Query: 490 VGIWPII----MSLSMF-----IQMKMSPP-----PADKGQAMILNWMPVVFVFALSSFP 535 V I ++ MS + F + MK P P + Q M++ +P++F F +FP Sbjct: 179 VKIVTVVLIVLMSATTFFTQRQLTMKNMPQTALDNPMARQQRMLMYVLPLIFAFTGVNFP 238 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGA 562 G+++YWS SN+ ++ QQ +++ A Sbjct: 239 IGVLVYWSTSNLWTMGQQFYVIRRSPA 265 >gi|21222290|ref|NP_628069.1| putative inner membrane protein translocase component YidC [Streptomyces coelicolor A3(2)] gi|38502851|sp|O54569|OXAA_STRCO RecName: Full=Membrane protein oxaA gi|6539748|gb|AAF16008.1|AF187159_8 Orf431 [Streptomyces coelicolor A3(2)] gi|2898107|gb|AAC03487.1| inner membrane protein [Streptomyces coelicolor A3(2)] gi|4808379|emb|CAB42700.1| putative membrane protein [Streptomyces coelicolor A3(2)] Length = 431 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 67/282 (23%), Positives = 129/282 (45%), Gaps = 44/282 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITWPVSWVIVQFHTVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRGM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLN- 125 Query: 450 SLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFYLPGFMHV--------------GIW 493 + G I L +A +IF + + G V + Sbjct: 126 --GIASGDTIGKINQPLLESAQKAHIFGA-PLAAKFTDGASKVESLGASLTDVRVITAVM 182 Query: 494 PIIMSLSMFIQMKM---------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 ++MS S F + P + Q M++ PV+F +FP G+++YW Sbjct: 183 IVLMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLT 242 Query: 545 SNVISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYNSQ 581 +NV ++ QQ +++ + A+ ++RL + +++ ++ Sbjct: 243 TNVWTMGQQMYVIRNNPTPGSKAQASYLERLHKSVTEHGRTR 284 >gi|116492484|ref|YP_804219.1| preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC 25745] gi|116102634|gb|ABJ67777.1| Preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC 25745] Length = 316 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 33/234 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANM 389 +G Y ++A P M+Y +L+ G++G+AI+L T V+L+ PL ++K + M Sbjct: 33 YGPIYDYLAIPTQHFMNYLSHLLCGSYGLAIILVTFVVRLILLPLMLNQSRKATIQQEKM 92 Query: 390 KNIQP--KIDELREKFKQSPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 IQP K+ + R + ++P + + + M+ LYK +N++ G C PI++Q PVF A+ Sbjct: 93 AFIQPQLKVLQARNQAAKTPEERAAISQEMMALYKDNNVSMTGGIGCLPIIIQFPVFAAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMF 502 Y I S E+ F G + A P+ + L + L G++ +G+ P Sbjct: 153 YAAIQYSPELHQGLFLG----INLAKPSILLAAISFLVYLLQGWLGTLGVAP-------- 200 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q KM MI++ P++ +F S P GL +Y++ V + +Q I Sbjct: 201 EQRKM------MRSMMIVS--PLMILFFTFSSPGGLGLYFAVGGVFACIQTLAI 246 >gi|325688910|gb|EGD30918.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK115] Length = 271 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 23/208 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I L+EK+ Sbjct: 47 FLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESRT 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L + +LYK +NP A P+ +Q+PV A+++ ++ M+ F W+ +L A D Sbjct: 107 ALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDFMKTGHFL-WL-NLGATD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFV 528 PT I L L F + W +L P + G +++ +PV +F Sbjct: 165 PTFILPLLAAL------FTFLSTWLSNKAL----------PERNGGMTVMMYLLPVAIFF 208 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 FAL + +G+ +YW+ SN +VQ ++ Sbjct: 209 FALYA-ASGVALYWAVSNAYQVVQTLLL 235 >gi|154686651|ref|YP_001421812.1| OxaA-like protein precursor [Bacillus amyloliquefaciens FZB42] gi|154352502|gb|ABS74581.1| YqjG [Bacillus amyloliquefaciens FZB42] Length = 278 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 30/217 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMKNIQPKIDELREKFKQS----PPQ 409 G +G++I+L T+ V+++ PL KKQ V M I+P++D ++ K KQ+ + Sbjct: 63 GEYGLSIILVTIIVRIVVLPLFVNQFKKQRVFQEKMAVIKPQVDSIQAKMKQTKDAEKQK 122 Query: 410 VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 LQ M++LY+ HN+NP+A GC P+L+Q P+ Y I + E+ F W L + Sbjct: 123 ELQMEMMKLYREHNLNPMAMGCLPMLVQFPILIGFYYAIRSTPEIASHSFL-WF-SLGHS 180 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP----PPADKGQAMILNWMP 524 D IL G M+ + +S + K SP P A + +++ P Sbjct: 181 D---------ILVSLCAGAMYF----LQAYISQKLNEKYSPAAQNPAAMQSAKIMVFIFP 227 Query: 525 VVF-VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 V+ VF+L + PA L +YW S + VQ ++ + H Sbjct: 228 VMMTVFSL-NVPAALPLYWFTSGLFLTVQNVLLQQTH 263 >gi|327462709|gb|EGF09031.1| stage III sporulation protein J [Streptococcus sanguinis SK1057] Length = 271 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 23/208 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I L+EK+ Sbjct: 47 FLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESRT 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L + +LYK +NP A P+ +Q+PV A+++ ++ M+ F W+ +L A D Sbjct: 107 ALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDFMKTGHFL-WL-NLGATD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFV 528 PT I L L F + W +L P + G +++ +PV +F Sbjct: 165 PTFILPLLAAL------FTFLSTWLSNKAL----------PERNGGMTVMMYLLPVMIFF 208 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 FAL + +G+ +YW+ SN +VQ ++ Sbjct: 209 FALYA-ASGVALYWAVSNAYQVVQTLLL 235 >gi|223995523|ref|XP_002287435.1| chloroplast membrane protein [Thalassiosira pseudonana CCMP1335] gi|220976551|gb|EED94878.1| chloroplast membrane protein [Thalassiosira pseudonana CCMP1335] Length = 407 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 31/237 (13%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 +G++I L T V+ L P + +Q S+ MK ++P +++EK+ Q +A+ +L Sbjct: 89 TWGVSIFLFTAGVRALLVPFSIQQSKSSEYMKALKPYQQKIKEKYTDKNMQ--NRAISKL 146 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 ++ NPLAGC QIP+F +Y+ V ++ E R + WI L P T + Sbjct: 147 FEDAQANPLAGCVTSFAQIPIFLGLYRSVTRLAQEGRLDEPFLWIPSLQG--PVTAETNY 204 Query: 478 ------------GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ--------- 516 G+ P + + P+++ L M + P D Q Sbjct: 205 RGTEWLTQGWVDGVPPLSWETTLAFCVMPVLLVLGQSFTMNVLQQPDDDSQDEETKKQME 264 Query: 517 --AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA---EIGLID 568 IL ++P++ F PAGL IYW SN+ ++ Q +I + A E+ L D Sbjct: 265 STKTILKFLPLMIGFFSLQVPAGLTIYWFTSNLFTVSQSLIIRGYYAANPPEVKLPD 321 >gi|307105163|gb|EFN53413.1| hypothetical protein CHLNCDRAFT_136603 [Chlorella variabilis] Length = 496 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 50/278 (17%) Query: 335 DWGWFYFIAKPMFMLMSYFYN---LVG---NFGIAIMLTTVFVKLLFFPLAKKQYV---- 384 D GW + + ++++ + VG ++G +I+ T +KL FPL KKQ Sbjct: 136 DNGWLQPLVTGLETVLTFIEDGLVRVGVPYSYGWSIVALTALIKLATFPLTKKQARPGPG 195 Query: 385 --------------STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 S N++ ++P+ID ++E++ + V Q+ LY+ ++PLAGC Sbjct: 196 PPAPFRPCLPPRVESALNVQRLKPQIDAIKEQYGDNKDAV-QRETSALYEKAGVDPLAGC 254 Query: 431 WPILLQIPVFFAIYKVI---SISLEMRHAPFWGWIKDLAAADPTNIFTLFG------ILP 481 P L IP+F +Y+ + S E A F+ WI LA PT++ +LP Sbjct: 255 LPSLATIPIFIGLYRSLSDFSTQQEAGSAAFY-WIPSLAG--PTSVAAQKAGSGTAWLLP 311 Query: 482 FYLPGFMHVGIWP-----IIMSLSMFIQMKMSPPPA--DKGQAM----ILNWMPVVFVFA 530 + G +G W + + ++++I + PP D G A ++ +P++ + Sbjct: 312 L-VDGVPPIG-WDLASRYLALPVALYISNAIITPPQTDDSGAAKFTQNLVKVLPLMIGWF 369 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 + PAGL +Y+ + V + QQ + K+ GA + D Sbjct: 370 ALNVPAGLSLYYFSNTVFTTAQQVYLKKLGGANLAEYD 407 >gi|153854259|ref|ZP_01995558.1| hypothetical protein DORLON_01552 [Dorea longicatena DSM 13814] gi|149753034|gb|EDM62965.1| hypothetical protein DORLON_01552 [Dorea longicatena DSM 13814] Length = 363 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 75/288 (26%), Positives = 131/288 (45%), Gaps = 37/288 (12%) Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV--------GNFGIAIMLTTVFVKL 373 E+ + +P +W + + +M++ YN + G G++I+L T+FV Sbjct: 2 EEKIMVPSLLTAANWPIVGQLCWILGKVMNFIYNFLDKCLPSDSGLVGLSIILYTIFVYT 61 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG 429 L PL KQ ++ + P+I +++K+K Q Q+ + Q+Y + + AG Sbjct: 62 LLLPLTIKQQRTSKMSSVMNPEIQAIQKKYKNKKDQASMMKQQEEIQQVYDKYGTSMSAG 121 Query: 430 CWPILLQIPVFFAIYKVI----SISLEMRHAP----FWGWIKDLAAADPTNIFTLFGILP 481 C P+L+Q+P+ FA+Y VI E++ AP + + DL + P + G Sbjct: 122 CLPLLIQMPLLFALYPVIYNIQKYVPEIKTAPKAVNVFLTLPDLTIS-PMQMIKNSGSYG 180 Query: 482 FYLPGFMHV---GIWPIIMSLSMFIQMKMSPP------PADKGQAMILN----WMPVVFV 528 F P M + + P++ L+ + +K+S D A +N MP+ V Sbjct: 181 F--PAIMIIITAILLPVLSGLTQYGSIKLSQAISGQQLDKDNPMASTMNTMNITMPLFSV 238 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 F + S P G+ +YW S V+ VQQ I K H ++I + + L K Sbjct: 239 FMVFSLPTGIGLYWIVSAVVRCVQQVFINK-HLSKISVEEILEQNKEK 285 >gi|259503597|ref|ZP_05746499.1| membrane protein OxaA 2 [Lactobacillus antri DSM 16041] gi|259168421|gb|EEW52916.1| membrane protein OxaA 2 [Lactobacillus antri DSM 16041] Length = 314 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 116/235 (49%), Gaps = 35/235 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 +G+ Y ++AKPM LM + +GN +G AI++ V V+ + P+ KK ++ M Sbjct: 32 YGFVYDYMAKPMQHLMEWLAAHLGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTITQEKM 91 Query: 390 KNIQPKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +QP I EL EK K Q+P + + + M+ LY+ +NI+ G C P+L+Q+PVF A+ Sbjct: 92 AKVQPLIKELSEKQKAAQTPEEQAAVSQQMMALYRDNNISITGGIGCLPLLIQLPVFAAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMF 502 Y I S ++ HA F+G +A P+ + + + + ++ VG+ Sbjct: 152 YAAIRYSPDLYHAEFFG----IALGKPSILLAVLSFIAYAAQSYLGLVGV---------- 197 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAVI 556 P K Q + WM F +S + AGL +Y+ + +I+Q ++ Sbjct: 198 -------PEEQKKQMKMAIWMSPFMTFFISLTSSAGLGLYFFIGGLFAILQTIMV 245 >gi|311068990|ref|YP_003973913.1| OxaA-like protein precursor [Bacillus atrophaeus 1942] gi|310869507|gb|ADP32982.1| OxaA-like protein precursor [Bacillus atrophaeus 1942] Length = 277 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 74/267 (27%), Positives = 122/267 (45%), Gaps = 36/267 (13%) Query: 326 AIPRFEMLIDWGWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLA---- 379 A P+ L + G+F+ ++ +P L+ L G +G++IML T+ V+++ PL Sbjct: 27 ATPQTGGLGNIGFFHDYLIEPFSALLKGVAGLFNGEYGLSIMLVTIIVRVIVLPLFVHQF 86 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLA-GCWPIL 434 KKQ V M I+P+ID ++ K K++ + LQ M++LY+ +N+NPLA GC P+L Sbjct: 87 KKQRVFQEKMAVIKPQIDSIQAKIKKNKDPEKQKELQMEMMKLYQENNLNPLAMGCLPML 146 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q P+ Y I + E+ F W L +D IL G M+ Sbjct: 147 VQFPILIGFYYAIRSTPEIASHSFL-WF-SLGQSD---------ILVSLCAGAMYFIQAY 195 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 + LS P A + +++ + PV+ + PA L +YW S + VQ Sbjct: 196 VAQKLSAKYSAVPQNPAAQQSAKIMVFFFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNV 255 Query: 555 VIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + L+ T+ KN N + Sbjct: 256 I--------------LQQTYHKNKNKE 268 >gi|220913496|ref|YP_002488805.1| hypothetical protein Achl_2751 [Arthrobacter chlorophenolicus A6] gi|219860374|gb|ACL40716.1| 60 kDa inner membrane insertion protein [Arthrobacter chlorophenolicus A6] Length = 266 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 29/223 (13%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 +AI+ + V+ P+ Q + M+ +QP + L+EK+ Q ++AM Q Sbjct: 45 LAIIGLVLVVRAALIPVFLAQVRAQRRMRQLQPDLKALQEKYAGRTDQQSRQAMAQEQMA 104 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LY+ H NP + C P+L+Q P F +++V++ I + G + A A+ N T+ Sbjct: 105 LYRKHGTNPFSACLPLLIQAPFFLGLFQVLAGIPDAVGRGTGIGAMAA-AQAEQFNSATI 163 Query: 477 FGILPFYLPGFMHVGIWP-----------IIMSLSMFIQMKM----------SPPPADKG 515 FG P +H G P ++M+ F+ K+ P P + Sbjct: 164 FGA-PLS-ASLLHGGGDPAAVAVLALAMILVMTACQFLTQKLVTARTALGPDVPAPLLRQ 221 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q IL +P+VF + FP G+++YW+ SN+ ++ QQ ++ + Sbjct: 222 QRAILVALPLVFAAGGAFFPIGVLVYWTVSNLWTLGQQYLVTR 264 >gi|298709029|emb|CBJ30979.1| Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus siliculosus] Length = 342 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 5/113 (4%) Query: 338 WFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W FI + + ++ FY +G +FG+AI+ T+ VK L PL Q S+ MK +QP Sbjct: 107 WIEFI-RSSVLGINEFYKGIGIEQSFGLAIVTFTLGVKTLLVPLQAIQLQSSEKMKVLQP 165 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + E+ KF Q+ + A +LY +NPL GC P LLQ PVF +Y+ I Sbjct: 166 TVKEINAKFGQNK-EAATAATNRLYAETKVNPLIGCLPALLQFPVFIGLYRAI 217 >gi|257871385|ref|ZP_05651038.1| inner membrane protein [Enterococcus gallinarum EG2] gi|257805549|gb|EEV34371.1| inner membrane protein [Enterococcus gallinarum EG2] Length = 274 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 23/203 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQSPPQVLQKAM 415 GN GI I+L T+ ++++ PL Q S + +QPK+ L++++ K S Q +A Sbjct: 55 GNAGIGIILFTLIIRIILMPLMHFQTKSMRKTQELQPKLKALQQQYASKDSETQNKLRAE 114 Query: 416 IQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 Q LY +N+NP AGC P+L+Q+P+ A+++ IS ++ F W++ L DP Sbjct: 115 TQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPALQEGKFL-WLQ-LGDRDP---- 168 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSS 533 + ILP F + LS Q++ I+N+ MP++ + + Sbjct: 169 --YFILPILAALFTFASTY-----LSSMSQIE------SNASLKIMNFAMPLMILLMGIN 215 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 +GL +YW SN +VQ ++ Sbjct: 216 IASGLSLYWVVSNAFQVVQTLIL 238 >gi|158319055|ref|YP_001511563.1| 60 kDa inner membrane insertion protein [Frankia sp. EAN1pec] gi|158114460|gb|ABW16657.1| 60 kDa inner membrane insertion protein [Frankia sp. EAN1pec] Length = 461 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 36/243 (14%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F S+F + +++L + V++L FPL KQ S M+ +QP+I E++EK+ Sbjct: 22 PIFGADSFFA-----WAFSVVLLVICVRILIFPLFVKQVKSQRTMQMMQPRIKEIKEKYG 76 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP----FWG 460 Q +Q +++L K H NPL GC PILLQIP+F +++ V + M P W Sbjct: 77 HD-KQQMQLEIMKLQKEHG-NPLLGCLPILLQIPLFISLFHVFTHLAPMNEGPGGSLVWR 134 Query: 461 WIKDLAAADPTNIFT--LFGI------------LPFYLPGFMHVGIWPIIM-----SLSM 501 L+A I + L+GI L F H I +++ + + Sbjct: 135 PRVGLSADQVEQIASAKLWGISLSNSFGSSQESLDFLGANGTHAKILAVVLIVLMGATTF 194 Query: 502 FIQMKM--SPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 F Q ++ P D QAM+ L P++ FP +++YW +N+ S+ QQ Sbjct: 195 FTQRQIMARTGPVDPQQAMVQKILLYGSPLMLAIFGFRFPIAVLLYWLTTNLWSMGQQFF 254 Query: 556 IMK 558 ++K Sbjct: 255 VIK 257 >gi|209558773|ref|YP_002285245.1| Membrane protein oxaA 1 precursor [Streptococcus pyogenes NZ131] gi|209539974|gb|ACI60550.1| Membrane protein oxaA 1 precursor [Streptococcus pyogenes NZ131] Length = 269 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 102/201 (50%), Gaps = 27/201 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ EL++K+ Q K + Sbjct: 51 GSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTQTRMKLAEE 110 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK + +NP A P+L+Q+PV A+++ ++ ++ F W+ +LA D Sbjct: 111 SQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLKTGTFL-WV-ELAQHD----- 163 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWMPVVFVFAL 531 H+ + P++ ++ F+ ++ A + M ++ MP++ F Sbjct: 164 --------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPLMIFFMG 209 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 + +G+++YW+ SN +VQ Sbjct: 210 FNLASGVVLYWTVSNAFQVVQ 230 >gi|16079445|ref|NP_390269.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. 168] gi|221310308|ref|ZP_03592155.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. 168] gi|221314632|ref|ZP_03596437.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319555|ref|ZP_03600849.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. JH642] gi|221323831|ref|ZP_03605125.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. SMY] gi|321311869|ref|YP_004204156.1| OxaA-like protein [Bacillus subtilis BSn5] gi|1731070|sp|P54544|OXAA2_BACSU RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|1303958|dbj|BAA12613.1| YqjG [Bacillus subtilis] gi|2634823|emb|CAB14320.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. subtilis str. 168] gi|320018143|gb|ADV93129.1| OxaA-like protein precursor [Bacillus subtilis BSn5] Length = 275 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 22/239 (9%) Query: 333 LIDWGWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLA----KKQYVST 386 L + G+F+ ++ +P L+ L G +G++I+L T+ V+++ PL KKQ + Sbjct: 34 LSNVGFFHDYLIEPFSALLKGVAGLFHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRIFQ 93 Query: 387 ANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFF 441 M I+P++D ++ K K++ + LQ M++LY+ HNINPLA GC P+L+Q P+ Sbjct: 94 EKMAVIKPQVDSIQVKLKKTKDPEKQKELQMEMMKLYQEHNINPLAMGCLPMLIQSPIMI 153 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y I + E+ F W L +D IL G M+ I LS Sbjct: 154 GLYYAIRSTPEIASHSFL-WF-SLGQSD---------ILMSLSAGIMYFVQAYIAQKLSA 202 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P A + +++ PV+ + PA L +YW S + VQ V+ H Sbjct: 203 KYSAVPQNPAAQQSAKLMVFIFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNIVLQMTH 261 >gi|297563780|ref|YP_003682754.1| membrane protein insertase, YidC/Oxa1 family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848228|gb|ADH70248.1| membrane protein insertase, YidC/Oxa1 family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 314 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 28/218 (12%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G++I+L TV ++LL PL KQ + M++IQPKI +LRE++K + LQ+ ++LY Sbjct: 33 WGLSIVLLTVLMRLLLVPLFVKQMNTQRKMQDIQPKILKLRERYKHD-KERLQRESMKLY 91 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVI----------SISLEMRHAPFWGWIKDLAAA- 468 + NP+ GC P+LLQ+PVFFA++ V+ + + E+ + I + A Sbjct: 92 QESGTNPIMGCLPLLLQMPVFFALFSVLRSVAEGNAQYNFTPELVESARAALIFEAPVAA 151 Query: 469 ----DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---------MSPPPADKG 515 P + L P + + I +IM + F+ M+ M P + Sbjct: 152 QFNSTPEELLALGASDPIM--AKVIIAIACVIMGTTTFLTMRQSMKRSVSQMPDNPMMQT 209 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 Q +++ P+ +F L P G+++YW SNV ++ QQ Sbjct: 210 QKIMMYMAPLFGLFGL-MMPVGVLVYWVTSNVWTMGQQ 246 >gi|257875890|ref|ZP_05655543.1| inner membrane protein [Enterococcus casseliflavus EC20] gi|257810056|gb|EEV38876.1| inner membrane protein [Enterococcus casseliflavus EC20] Length = 274 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 23/203 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV---LQKA 414 GN GI I+L T+ ++++ PL Q S + +QPK+ L++++ + L++ Sbjct: 55 GNAGIGIILFTLIIRVILMPLMHFQTKSMRKTQELQPKLKALQQQYASKDTETQSKLKEE 114 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY +N+NP AGC P+L+Q+P+ A+++ IS ++ F W++ L DP Sbjct: 115 TQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPALQEGKFL-WLQ-LGDRDP---- 168 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSS 533 + ILP F + LS Q++ I+N+ MP++ + + Sbjct: 169 --YFILPILAALFTFASTY-----LSSMSQVE------SNASLKIMNFAMPMMILLMGIN 215 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 +GL +YW SN +VQ ++ Sbjct: 216 IASGLSLYWVVSNAFQVVQTMIL 238 >gi|257866272|ref|ZP_05645925.1| inner membrane protein [Enterococcus casseliflavus EC30] gi|257873212|ref|ZP_05652865.1| inner membrane protein [Enterococcus casseliflavus EC10] gi|257800230|gb|EEV29258.1| inner membrane protein [Enterococcus casseliflavus EC30] gi|257807376|gb|EEV36198.1| inner membrane protein [Enterococcus casseliflavus EC10] Length = 274 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 23/203 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV---LQKA 414 GN GI I+L T+ ++++ PL Q S + +QPK+ L++++ + L++ Sbjct: 55 GNAGIGIILFTLIIRVILMPLMHFQTKSMRKTQELQPKLKALQQQYASKDTETQSKLKEE 114 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY +N+NP AGC P+L+Q+P+ A+++ IS ++ F W++ L DP Sbjct: 115 TQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPALQEGKFL-WLQ-LGDRDP---- 168 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSS 533 + ILP F + LS Q++ I+N+ MP++ + + Sbjct: 169 --YFILPILAALFTFASTY-----LSSMSQVE------SNASLKIMNFAMPMMILLMGIN 215 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 +GL +YW SN +VQ ++ Sbjct: 216 IASGLSLYWVVSNAFQVVQTMIL 238 >gi|153956505|ref|YP_001397270.1| inner membrane protein translocase component YidC [Clostridium kluyveri DSM 555] gi|219856808|ref|YP_002473930.1| hypothetical protein CKR_3465 [Clostridium kluyveri NBRC 12016] gi|146349363|gb|EDK35899.1| OxaA [Clostridium kluyveri DSM 555] gi|219570532|dbj|BAH08516.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 221 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 108/203 (53%), Gaps = 23/203 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++GIAI+L T+ ++++ PL KQ S+ M IQP++ +L+EK+K+ PQ Q+ M++L Sbjct: 29 SYGIAIILMTLIIRIIILPLGVKQLKSSLIMNEIQPEVKKLQEKYKKD-PQRAQQEMMKL 87 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF--TL 476 YK +P +GC P+L+Q P+ A+Y V + +L + + WI DLA D IF L Sbjct: 88 YKEKGASPFSGCLPLLIQWPILIALYYVFN-NLSGINGVSFLWISDLAKRD---IFLAIL 143 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 GI + FM MS + + A + Q M + M VF F + Sbjct: 144 SGITTYLSTYFM--------MSSN-------NSEQAKQTQTMNIG-MSGFMVFMSLGFKS 187 Query: 537 GLIIYWSWSNVISIVQQAVIMKM 559 L++YW SN+I I Q VI ++ Sbjct: 188 ALVLYWVVSNLIQIAQTLVIKRI 210 >gi|257070288|ref|YP_003156543.1| preprotein translocase subunit YidC [Brachybacterium faecium DSM 4810] gi|256561106|gb|ACU86953.1| preprotein translocase subunit YidC [Brachybacterium faecium DSM 4810] Length = 366 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 119/245 (48%), Gaps = 37/245 (15%) Query: 349 LMSYFYNLVGNF-----GI----AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 LM F+ L+ F G+ +I+ TV V+ L PL +Q ++ +M+ + P++ + Sbjct: 14 LMVKFHALLSVFMEPDSGVTWVFSIVGLTVVVRTLIIPLFVRQIRASRSMQMVSPELQAV 73 Query: 400 REKFK----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL--EM 453 ++K+K Q Q + + + +YK +P + C P+LLQ+P+FF +++V+ L Sbjct: 74 QKKYKGKTDQESRQKMAEETMAIYKEAGASPFSSCLPVLLQMPIFFGLFRVLFYKLPEAA 133 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGIL----PFYLPG------FMHVGIWPIIMSLSMF- 502 APF +LA + ++ T+ G + F PG + GI M F Sbjct: 134 DGAPFGPLSTELARSARSS--TILGDVTIANSFLKPGDGGTVTMVLAGIIIACMCAVTFF 191 Query: 503 ----IQMKMSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + MK P + +G Q M+L +P ++V P G++IYW +NV + QQ Sbjct: 192 TQKSLTMKNMPKASLEGPMASTQKMMLYMLPFIYVITGPGMPIGVLIYWLTTNVWTFGQQ 251 Query: 554 AVIMK 558 A++++ Sbjct: 252 AIVIR 256 >gi|312200977|ref|YP_004021038.1| membrane protein insertase, YidC/Oxa1 family [Frankia sp. EuI1c] gi|311232313|gb|ADP85168.1| membrane protein insertase, YidC/Oxa1 family [Frankia sp. EuI1c] Length = 434 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 71/242 (29%), Positives = 112/242 (46%), Gaps = 35/242 (14%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F S+F + ++ L V V++L FPL KQ S M+ +QP+I E+REK+ Sbjct: 22 PIFGENSFFA-----WAFSVALLVVCVRILIFPLFVKQVKSQRTMQLMQPRIKEIREKYG 76 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW--- 461 Q+ QK M++L K H NPL GC PI LQIP+F +++ V + + W Sbjct: 77 HDKQQMNQK-MMELQKEHG-NPLLGCLPIFLQIPLFISLFHVFTHMAPVTKNGKLEWVDR 134 Query: 462 -------IKDLAAAD------PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM-----FI 503 I+ +A A TN + +L +H+ I +++ L M F Sbjct: 135 VGLSGATIEKIAKAKIWGISLSTNFNSSKALLNELHADSVHIKIVCVVLILLMAATTFFT 194 Query: 504 Q---MKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q M + D QA++ M P+ FP ++IYW +N+ S+ QQ + Sbjct: 195 QRQIMARTGGTVDPQQAIVQKIMLYGSPITLAVFGFRFPVAVLIYWLVTNLWSMGQQFFV 254 Query: 557 MK 558 +K Sbjct: 255 IK 256 >gi|297243216|ref|ZP_06927151.1| preprotein translocase subunit YidC [Gardnerella vaginalis AMD] gi|296888750|gb|EFH27487.1| preprotein translocase subunit YidC [Gardnerella vaginalis AMD] Length = 337 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 126/253 (49%), Gaps = 40/253 (15%) Query: 337 GWFYFIAKP----MFMLMSYFYNLVGNFGI---------AIMLTTVFVKLLFFPLAKKQY 383 GWFY I P M +MS F+ L+ G+ +I+ + V FP K Sbjct: 15 GWFYKILTPVEWLMTQIMSLFHKLLTLLGMNEIGFSWVFSIVFLVLVVHACIFPAFIKSI 74 Query: 384 VSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 M+ I PK+ ++++K+K + + +Q+ M++LY+ + NP C P+++Q P Sbjct: 75 KGMRKMQAIAPKVKKIQQKYKGKNDPASKEAMQREMMKLYQDNKANPAGSCLPMMIQGPA 134 Query: 440 FFAIYKVISI---SLEMRHAPFWGWIKDLAAAD---PTNIFTLFGILPFYL----PGFMH 489 F +I+ +S+ +HA + D+A A T +F + G+ ++ G + Sbjct: 135 FMSIWYTLSVIPFIARGKHAALGAF--DIATAQQFVKTRVFGV-GVADTFMTTAGAGKIV 191 Query: 490 VGIWPIIMSLSM-FIQM----KMSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLI 539 + I+ ++M +M ++Q K PP + +G Q +++ P+++VF+ + P ++ Sbjct: 192 IVIFVVLMCAAMWYMQFNNIRKNLPPESKQGSQYTVQKLMMWGFPLIYVFSAFAMPFAML 251 Query: 540 IYWSWSNVISIVQ 552 +YW +NVI++++ Sbjct: 252 VYWLVNNVINMLR 264 >gi|119510151|ref|ZP_01629290.1| putative inner membrane protein translocase component YidC [Nodularia spumigena CCY9414] gi|119465212|gb|EAW46110.1| putative inner membrane protein translocase component YidC [Nodularia spumigena CCY9414] Length = 380 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 75/131 (57%), Gaps = 12/131 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL+ + M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYGIVPSYGLAIVALTLIIRFALYPLSAGSIRNMRKMRIVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P ++ E++EK+K + PQ Q+ M+ + K NPLAGC P++LQ+PV A++ Sbjct: 61 PLMQKRMAEIKEKYKDN-PQKQQEEMVNVQKEFG-NPLAGCLPLVLQMPVLLALFAT--- 115 Query: 450 SLEMRHAPFWG 460 +R +PF G Sbjct: 116 ---LRGSPFAG 123 >gi|323341096|ref|ZP_08081344.1| stage III sporulation protein J [Lactobacillus ruminis ATCC 25644] gi|323091517|gb|EFZ34141.1| stage III sporulation protein J [Lactobacillus ruminis ATCC 25644] Length = 268 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 22/202 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQSPPQV--LQKA 414 N+G I++ T+ V+++ PL Q S IQP++ L++K+ + P Q+ + + Sbjct: 48 NYGWGIVVFTIIVRIIILPLMIYQMKSMRKTTEIQPQLMALQKKYPDRSDPEQMRMMSEE 107 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY +NP+AGC P+L+Q+P+ A+Y+ I S ++ F W++ L DP Sbjct: 108 QKRLYAEAGVNPVAGCLPLLVQMPILIALYQAIFRSETLKTGKFL-WMQ-LGDKDP---- 161 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + ILP F + W + +K P M++ +MP++ + S Sbjct: 162 --YYILPILAAIFTFLTSW---------LSVKAQPEKNAMTTGMMV-FMPLMILVTAISV 209 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 PA L +YW +N S+ Q +I Sbjct: 210 PAALSLYWVVTNAFSVGQTLLI 231 >gi|283458991|ref|YP_003363641.1| preprotein translocase subunit YidC [Rothia mucilaginosa DY-18] gi|283135056|dbj|BAI65821.1| preprotein translocase subunit YidC [Rothia mucilaginosa DY-18] Length = 329 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 34/221 (15%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 + I+ T+ ++ L PL KQ + M +Q + +L+EK+K Q+ ++AM Q Sbjct: 41 LCIIFLTLVMRTLTIPLFVKQIKAMRGMTAMQGDMAKLQEKYKGKKDQLSRQAMAQEQME 100 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT-- 475 +Y+ H NP A C PIL Q+P+FF +Y+V+ +S+ G + + A+ + F Sbjct: 101 MYRKHGTNPFASCLPILAQMPIFFGLYQVL-MSVPTAAQNNQGVL--MLPAELVHQFNDS 157 Query: 476 -LFGILPFYLPGFMHVG------------IWPIIMSLSMF-IQMKMSPP---------PA 512 +FG F MH G I ++MS + F IQ ++S P Sbjct: 158 QIFGAQLF--ATMMHPGAGDATATVVQAVIMIVLMSATQFYIQKQLSVKNMSEAALNSPM 215 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + Q MI+ P++F + +FP G++ YW+ SN+ S+ QQ Sbjct: 216 FRQQQMIMYIFPIIFAVSGINFPLGVLYYWTVSNLWSLGQQ 256 >gi|213693342|ref|YP_002323928.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524803|gb|ACJ53550.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459524|dbj|BAJ70145.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 335 Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 126/265 (47%), Gaps = 48/265 (18%) Query: 331 EMLID---WGWFYFIAKPMFMLMSYFYNLVGNFGI-------------AIMLTTVFVKLL 374 E L+D WG+ Y I P+ L ++ +V +F + AI++ + V+ Sbjct: 5 EFLLDSGFWGFLYKILTPVEWLQTWIMKIVHDFFVMLGMSPIGVSWVLAIIILVLVVQAC 64 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGC 430 FPL KQ S M+ + PK+ ++ K+K Q ++AM ++LY+ ++ NP C Sbjct: 65 IFPLFCKQMKSMRKMQALAPKMKRIQNKYKGKTDQASKEAMSRETMKLYQDNDANPAGSC 124 Query: 431 WPILLQIPVFFAIYKVIS----ISLEMRHA--PFWGWIKDLAAADPTNIFTLFGILPF-- 482 P+L+Q PVF +++ +S I+ R A F D+A A +FGI+ Sbjct: 125 LPMLIQGPVFMSMFYTLSAIPYIANGKRGALGAF-----DVATAKQFTQTDVFGIVSVTD 179 Query: 483 -----YLPGFMHVGIWPIIMSLSM-FIQ---MKMSPPP------ADKGQAMILNWMPVVF 527 G + +G + +M + F+Q MK + P A+ Q +L PV++ Sbjct: 180 NFSRAATSGKVVIGTFVFLMCFCLWFMQYFNMKRNMPAASMNKQAETMQKAMLWLFPVMY 239 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQ 552 +F+ ++ P +++YW +NV ++ + Sbjct: 240 IFSGATMPFAVLVYWLTNNVCNLCR 264 >gi|229822836|ref|ZP_04448906.1| hypothetical protein GCWU000282_00125 [Catonella morbi ATCC 51271] gi|229787649|gb|EEP23763.1| hypothetical protein GCWU000282_00125 [Catonella morbi ATCC 51271] Length = 323 Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 112/229 (48%), Gaps = 30/229 (13%) Query: 339 FYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFP----LAKKQYVSTANMKNIQ 393 + ++ KP + + L ++G+AI++ T+ ++ P + + +S A MK Q Sbjct: 42 YEYLGKPAAAFLDFLAGFLFNSYGLAIIIVTLLTRVFMLPSSLKMTRDTMISQARMKVAQ 101 Query: 394 PKIDELREKFKQS--PPQV--LQKAMIQLYKTHNIN---PLAGCWPILLQIPVFFAIYKV 446 P+I+E++E+ S P + LQ+ ++ +YK +NIN L+GC P+LLQ+PV A+Y Sbjct: 102 PEINEIQEEINASKDPAERARLQQELMGVYKKYNINMLGGLSGCLPLLLQMPVISAVYAA 161 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 I S ++++ F G TL IL + I+ S M QM Sbjct: 162 IRTSSAIQNSTFLG-------IQLGQRSTLIVILVVAV---------SILQSWLMQKQMP 205 Query: 507 MSPPPADKGQ-AMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +P GQ + ++ WM P++F + + AGL +Y+ V I QQ Sbjct: 206 STPGNEKAGQTSQVMFWMNPILFGWMTWTTDAGLGLYFLAGAVFMIGQQ 254 >gi|304384699|ref|ZP_07367045.1| membrane protein [Pediococcus acidilactici DSM 20284] gi|304328893|gb|EFL96113.1| membrane protein [Pediococcus acidilactici DSM 20284] Length = 322 Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 115/233 (49%), Gaps = 31/233 (13%) Query: 336 WGWFYF-IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANM 389 +G+ Y +A PM M Y +LVG ++G+AI+L T V+L+ PL ++K V M Sbjct: 33 YGFIYDNLAVPMQHFMDYLSHLVGGSYGLAIILITFVVRLILLPLMVNQSRKATVQQEKM 92 Query: 390 KNIQPKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 IQP++ L+E+ + ++P + + + M+ LY+ +NI+ G C P+L+Q PVF A+ Sbjct: 93 SYIQPQLKVLQERNQTAKTPEEKAAVSQEMMALYRDNNISMTGGIGCLPLLIQFPVFAAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ F G DL+ + F + + L G++ P +M Sbjct: 153 YAAIQYSPELHQGIFLGI--DLSKSSLLLSIISFLV--YLLQGWLGTLGVPEEQRKTMRS 208 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M +SP M + F F S PAGL +Y++ V + +Q +I Sbjct: 209 MMVISP------------LMILFFTF---STPAGLGLYFAVGGVFACIQTLLI 246 >gi|116671593|ref|YP_832526.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24] gi|116611702|gb|ABK04426.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24] Length = 275 Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 ++I+ + ++ P+ +Q + M+ +QP + L++K+K Q+ ++AM Q Sbjct: 45 LSIIGLVLVIRAALIPVFLQQVNAQRRMRRLQPDLKSLQDKYKGKADQLSRQAMAQEQMA 104 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWI--KDLAAADPTNIF 474 LYK H +P + C P+L+Q P F A+++V+S IS G + + + D ++IF Sbjct: 105 LYKKHGTSPFSACLPLLIQAPFFLALFQVLSGISSAAGRGQGIGTMSHEQVVQFDQSSIF 164 Query: 475 T--LFGILPFYLPG--FMHVGIWPIIMSLSM---------FIQMKMSPPPADKG-----Q 516 L L G + V + I+M L+M I + + A+ G Q Sbjct: 165 GAPLSASLLHGSGGGDALAVTVLAIVMILAMTAAQFLTQKLIMARFASGEAEAGPAMIQQ 224 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 MIL +PV+F FP G++IYW+ SN+ ++ QQ V+ Sbjct: 225 KMILYVLPVIFGAGGIVFPIGVLIYWTVSNLWTLAQQFVV 264 >gi|139473067|ref|YP_001127782.1| membrane protein OxaA 1 precursor [Streptococcus pyogenes str. Manfredo] gi|306828048|ref|ZP_07461313.1| stage III sporulation protein J [Streptococcus pyogenes ATCC 10782] gi|134271313|emb|CAM29531.1| membrane protein OxaA 1 precursor [Streptococcus pyogenes str. Manfredo] gi|304429764|gb|EFM32808.1| stage III sporulation protein J [Streptococcus pyogenes ATCC 10782] Length = 269 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 102/201 (50%), Gaps = 27/201 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ EL++K+ Q K + Sbjct: 51 GSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTQTRMKLAEE 110 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK + +NP A P+L+Q+PV A+++ ++ ++ F W+ +LA D Sbjct: 111 SQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLKTGTFL-WV-ELAQHD----- 163 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWMPVVFVFAL 531 H+ + P++ ++ F+ ++ A + M ++ MP++ F Sbjct: 164 --------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPLMIFFMG 209 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 + +G+++YW+ SN +VQ Sbjct: 210 FNLASGVVLYWTVSNAFQVVQ 230 >gi|309804916|ref|ZP_07698978.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 09V1-c] gi|309809716|ref|ZP_07703570.1| putative stage III sporulation protein J [Lactobacillus iners SPIN 2503V10-D] gi|312873301|ref|ZP_07733356.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2052A-d] gi|308165855|gb|EFO68076.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 09V1-c] gi|308169895|gb|EFO71934.1| putative stage III sporulation protein J [Lactobacillus iners SPIN 2503V10-D] gi|311091181|gb|EFQ49570.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2052A-d] Length = 291 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 22/217 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 Y+I+ + L + +N +G +I++ T+ V+++ PL S A +++QP+++ Sbjct: 54 LYYISSFILWLATILHN---AYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEMEA 110 Query: 399 LREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LR+K+ + LQ+ +LYK +NP GC P+L+Q+P+ A+++ I + E+++ Sbjct: 111 LRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRTPELQN 170 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 F W+ DL DP + ++P F + + + Q K S KG Sbjct: 171 GRFL-WM-DLGHPDP------YMVMPILAAIFTFIASY-----IGQLSQAKSSNNAMTKG 217 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + MPV S + L +YW SN+ +Q Sbjct: 218 MTYV---MPVFIGVMACSLQSALSLYWVISNLFQAIQ 251 >gi|259500780|ref|ZP_05743682.1| SpoIIIJ family protein [Lactobacillus iners DSM 13335] gi|315654127|ref|ZP_07907043.1| SpoIIIJ family protein [Lactobacillus iners ATCC 55195] gi|259167474|gb|EEW51969.1| SpoIIIJ family protein [Lactobacillus iners DSM 13335] gi|315488823|gb|EFU78469.1| SpoIIIJ family protein [Lactobacillus iners ATCC 55195] Length = 296 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 22/217 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 Y+I+ + L + +N +G +I++ T+ V+++ PL S A +++QP+++ Sbjct: 59 LYYISSFILWLAAILHN---AYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEMEA 115 Query: 399 LREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LR+K+ + LQ+ +LYK +NP GC P+L+Q+P+ A+++ I + E+++ Sbjct: 116 LRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRTPELQN 175 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 F W+ DL DP + ++P F + + + Q K S KG Sbjct: 176 GRFL-WM-DLGHPDP------YMVMPILAAIFTFIASY-----IGQLSQAKSSNNAMTKG 222 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + MPV S + L +YW SN+ +Q Sbjct: 223 MTYV---MPVFIGVMACSLQSALSLYWVISNLFQAIQ 256 >gi|309807784|ref|ZP_07701716.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 01V1-a] gi|308168886|gb|EFO70972.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 01V1-a] Length = 294 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 22/217 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 Y+I+ + L + +N +G +I++ T+ V+++ PL S A +++QP+++ Sbjct: 54 LYYISSFILWLAAILHN---AYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEMEA 110 Query: 399 LREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LR+K+ + LQ+ +LYK +NP GC P+L+Q+P+ A+++ I + E+++ Sbjct: 111 LRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRTPELQN 170 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 F W+ DL DP + ++P F + + + Q K S KG Sbjct: 171 GRFL-WM-DLGHPDP------YMVMPILAAIFTFIASY-----IGQLSQAKSSNNAMTKG 217 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + MPV S + L +YW SN+ +Q Sbjct: 218 MTYV---MPVFIGVMACSLQSALSLYWVISNLFQAIQ 251 >gi|154508234|ref|ZP_02043876.1| hypothetical protein ACTODO_00728 [Actinomyces odontolyticus ATCC 17982] gi|153797868|gb|EDN80288.1| hypothetical protein ACTODO_00728 [Actinomyces odontolyticus ATCC 17982] Length = 446 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 107/209 (51%), Gaps = 29/209 (13%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 ++I+L T+ V++ PL KQ S+ M+ IQP++ +++EK+K QV ++ M++ Sbjct: 39 LSIVLLTILVRIAIIPLFLKQIRSSRAMQAIQPEMRKIQEKYKGKKDQVSRQKMMEETQA 98 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRHAPFWGWIKD----LAAADPT 471 L + H ++P A C P+L+Q+PV F +Y+ I S+ + G D L + T Sbjct: 99 LQRKHKVSPFASCLPMLVQMPVLFGMYRAIIAVSSISNGTYTYRGEATDHLGPLTESVST 158 Query: 472 NIF--TLFGI-LPFYL------PGFMHVGIWPII-MSLSMFIQMKMS---------PPPA 512 I T+ G+ L L P + V I I+ M + F+ M++S P Sbjct: 159 EIVNSTVLGVPLSHTLRESWGQPTIVAVFIAAIVLMVVLQFVSMRLSFSRNMPDMGDNPM 218 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIY 541 + Q ++ MP++F+F+ + F G++IY Sbjct: 219 AQSQRSMMYVMPLMFIFSGAFFQMGVVIY 247 >gi|299537937|ref|ZP_07051223.1| membrane protein oxaA 2 precursor [Lysinibacillus fusiformis ZC1] gi|298726519|gb|EFI67108.1| membrane protein oxaA 2 precursor [Lysinibacillus fusiformis ZC1] Length = 210 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 114/227 (50%), Gaps = 32/227 (14%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKI 396 F+A+P+ L+ + ++ G++ ++++ T+ V+L+ PL AK Q S M I+P++ Sbjct: 4 FLAQPIINLIHFIHSFTGSYALSVIAITIAVRLILMPLFIRSAKHQKHSKELMTTIKPEL 63 Query: 397 DELREKFK----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 D L +K+K +S +++Q+ + +L + L GC PIL+Q+P+ F++Y I + L Sbjct: 64 DALTDKYKNSQSESEKRMVQQQIQELTSASLKSSLLGCLPILIQLPILFSLYYAIKLDLV 123 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + F W+ G + +G+ +I L FIQ ++ + Sbjct: 124 IASENFL-WMN---------------------LGTIDIGV-SMIACLIYFIQSCIALEKS 160 Query: 513 DKGQAMILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIVQQAVIMK 558 I+ ++ + + S F PA + IYW+ S ++ IVQQ +I K Sbjct: 161 QPLNMKIMVFINPIMILIFSLFNPAIIPIYWTVSALLLIVQQLIIKK 207 >gi|94993599|ref|YP_601697.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10750] gi|94547107|gb|ABF37153.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10750] Length = 275 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 102/201 (50%), Gaps = 27/201 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ EL++K+ Q K + Sbjct: 57 GSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTQTRMKLAEE 116 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK + +NP A P+L+Q+PV A+++ ++ ++ F W+ +LA D Sbjct: 117 SQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLKTGTFL-WV-ELAQHD----- 169 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWMPVVFVFAL 531 H+ + P++ ++ F+ ++ A + M ++ MP++ F Sbjct: 170 --------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPLMIFFMG 215 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 + +G+++YW+ SN +VQ Sbjct: 216 FNLASGVVLYWTVSNAFQVVQ 236 >gi|19745380|ref|NP_606516.1| hypothetical protein spyM18_0229 [Streptococcus pyogenes MGAS8232] gi|71902868|ref|YP_279671.1| hypothetical protein M28_Spy0202 [Streptococcus pyogenes MGAS6180] gi|94987840|ref|YP_595941.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS9429] gi|94989717|ref|YP_597817.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10270] gi|94991720|ref|YP_599819.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS2096] gi|38503059|sp|Q8P2P8|OXAA1_STRP8 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|19747487|gb|AAL97015.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gi|71801963|gb|AAX71316.1| conserved hypothetical protein [Streptococcus pyogenes MGAS6180] gi|94541348|gb|ABF31397.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS9429] gi|94543225|gb|ABF33273.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10270] gi|94545228|gb|ABF35275.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS2096] Length = 275 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 102/201 (50%), Gaps = 27/201 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ EL++K+ Q K + Sbjct: 57 GSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTQTRMKLAEE 116 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK + +NP A P+L+Q+PV A+++ ++ ++ F W+ +LA D Sbjct: 117 SQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLKTGTFL-WV-ELAQHD----- 169 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWMPVVFVFAL 531 H+ + P++ ++ F+ ++ A + M ++ MP++ F Sbjct: 170 --------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPLMIFFMG 215 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 + +G+++YW+ SN +VQ Sbjct: 216 FNLASGVVLYWTVSNAFQVVQ 236 >gi|71910022|ref|YP_281572.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS5005] gi|71852804|gb|AAZ50827.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS5005] Length = 269 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 101/201 (50%), Gaps = 27/201 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ EL+ K+ Q K + Sbjct: 51 GSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQRKYAGKDTQTRMKLAEE 110 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK + +NP A P+L+Q+PV A+++ ++ ++ F W+ +LA D Sbjct: 111 SQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLKTGTFL-WV-ELAQHD----- 163 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWMPVVFVFAL 531 H+ + P++ ++ F+ ++ A + M ++ MP++ F Sbjct: 164 --------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPLMIFFMG 209 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 + +G+++YW+ SN +VQ Sbjct: 210 FNLASGVVLYWTVSNAFQVVQ 230 >gi|302190769|ref|ZP_07267023.1| stage III sporulation protein J [Lactobacillus iners AB-1] gi|309804034|ref|ZP_07698115.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 11V1-d] gi|312871192|ref|ZP_07731290.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 3008A-a] gi|312872789|ref|ZP_07732854.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2062A-h1] gi|312874783|ref|ZP_07734802.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2053A-b] gi|325913658|ref|ZP_08176020.1| putative stage III sporulation protein J [Lactobacillus iners UPII 60-B] gi|329919822|ref|ZP_08276773.1| putative stage III sporulation protein J [Lactobacillus iners SPIN 1401G] gi|308163802|gb|EFO66068.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 11V1-d] gi|311089528|gb|EFQ47953.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2053A-b] gi|311091831|gb|EFQ50210.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2062A-h1] gi|311093206|gb|EFQ51552.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 3008A-a] gi|325477017|gb|EGC80167.1| putative stage III sporulation protein J [Lactobacillus iners UPII 60-B] gi|328937169|gb|EGG33597.1| putative stage III sporulation protein J [Lactobacillus iners SPIN 1401G] Length = 291 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 22/217 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 Y+I+ + L + +N +G +I++ T+ V+++ PL S A +++QP+++ Sbjct: 54 LYYISSFILWLAAILHN---AYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEMEA 110 Query: 399 LREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LR+K+ + LQ+ +LYK +NP GC P+L+Q+P+ A+++ I + E+++ Sbjct: 111 LRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRTPELQN 170 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 F W+ DL DP + ++P F + + + Q K S KG Sbjct: 171 GRFL-WM-DLGHPDP------YMVMPILAAIFTFIASY-----IGQLSQAKSSNNAMTKG 217 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + MPV S + L +YW SN+ +Q Sbjct: 218 MTYV---MPVFIGVMACSLQSALSLYWVISNLFQAIQ 251 >gi|313887656|ref|ZP_07821338.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846265|gb|EFR33644.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus harei ACS-146-V-Sch2b] Length = 244 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 27/212 (12%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 F ++I++ TV +KLL PL Q + M +QP++ +++ K+K PQ L +LY Sbjct: 33 FALSIIIATVIIKLLILPLNISQMKNQKKMAKLQPELKKIQTKYKND-PQTLAAKQQKLY 91 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +N N + GC P++L + V A Y+V + + A DP + Sbjct: 92 KDNNYNMVGGCLPMVLTMVVLIAFYRV------------FLNPQTFAFTDP-GFYEAMNK 138 Query: 480 LPFYLPGFMHVG---IWPIIMSLSMF-IQMKMSPPPADKGQA---------MILNWMPVV 526 FY+ H I P+I ++S F + + PA +G ++ MP++ Sbjct: 139 NFFYIKNIDHADKTLIMPVIAAVSTFLVSFITTKNPATQGAGADQAKSMMSTMMVVMPIL 198 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + AGL+IYW SN+ SIVQQ + K Sbjct: 199 IFSMARKYAAGLVIYWIVSNIFSIVQQLITNK 230 >gi|289524495|ref|ZP_06441349.1| stage III sporulation protein J [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502264|gb|EFD23428.1| stage III sporulation protein J [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 104 Score = 76.6 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 40/102 (39%), Positives = 72/102 (70%), Gaps = 1/102 (0%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 M ++++FY + ++GIAI+L T+ +++L +PL+ KQ VS M+ IQP++ L+EK+K Sbjct: 1 MLGVLNFFYEISNSYGIAIILLTILIRILLYPLSHKQLVSMKKMQQIQPRLKTLQEKYKD 60 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 Q L + +++LYK + +NP AGC P+L+Q+P+ +++VI Sbjct: 61 D-RQKLNQEVMKLYKEYGVNPAAGCLPLLVQLPILILLFRVI 101 >gi|2988415|gb|AAC08053.1| 60K inner-membrane protein homolog [Treponema pallidum] Length = 167 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 96/167 (57%), Gaps = 14/167 (8%) Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++E++K + Q + + M LY+ NPL+GC P L+Q+P+ FA+Y++ + E R A F Sbjct: 1 IQERYKGNT-QKIHEEMAXLYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMF 59 Query: 459 WG-WIKDLAAADPTNIFTLFGILPFYLP--GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 WI DL+ AD +++T LPF LP + + + P++ +S + K++ P + Sbjct: 60 IPYWIPDLSLAD--SVWT----LPFALPVTQWTQMRMLPVLYVVSQIMFSKLTQVPHTEQ 113 Query: 516 QA---MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ + MP+ F F P+GL++YW+ N +++VQQ V+ + Sbjct: 114 QKTSMTIMTYVMPLFFFFFFYDAPSGLLVYWTAMNGVTLVQQLVMKR 160 >gi|15674429|ref|NP_268603.1| hypothetical protein SPy_0247 [Streptococcus pyogenes M1 GAS] gi|21909712|ref|NP_663980.1| hypothetical protein SpyM3_0176 [Streptococcus pyogenes MGAS315] gi|28895093|ref|NP_801443.1| hypothetical protein SPs0181 [Streptococcus pyogenes SSI-1] gi|54038807|sp|P65632|OXAA1_STRP3 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|54041695|sp|P65631|OXAA1_STRP1 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|13621523|gb|AAK33324.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|21903896|gb|AAM78783.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|28810338|dbj|BAC63276.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] Length = 275 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 101/201 (50%), Gaps = 27/201 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ EL+ K+ Q K + Sbjct: 57 GSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQRKYAGKDTQTRMKLAEE 116 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK + +NP A P+L+Q+PV A+++ ++ ++ F W+ +LA D Sbjct: 117 SQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLKTGTFL-WV-ELAQHD----- 169 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWMPVVFVFAL 531 H+ + P++ ++ F+ ++ A + M ++ MP++ F Sbjct: 170 --------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPLMIFFMG 215 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 + +G+++YW+ SN +VQ Sbjct: 216 FNLASGVVLYWTVSNAFQVVQ 236 >gi|309805916|ref|ZP_07699948.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 03V1-b] gi|325912298|ref|ZP_08174695.1| putative stage III sporulation protein J [Lactobacillus iners UPII 143-D] gi|308167692|gb|EFO69839.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 03V1-b] gi|325475957|gb|EGC79126.1| putative stage III sporulation protein J [Lactobacillus iners UPII 143-D] Length = 291 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 22/217 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 Y+I+ + L + +N +G +I++ T+ V+++ PL S A +++QP+++ Sbjct: 54 LYYISSFILWLAAILHN---AYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEMEA 110 Query: 399 LREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LR+K+ + LQ+ +LYK +NP GC P+L+Q+P+ A+++ I + E+++ Sbjct: 111 LRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRTPELQN 170 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 F W+ DL DP + ++P F + + + Q K S KG Sbjct: 171 GRFL-WM-DLGHPDP------YMVMPILAAIFTFIASY-----IGQLSQAKSSNNAMTKG 217 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + MPV S + L +YW SN+ +Q Sbjct: 218 MTYV---MPVFIGVMACSLQSALSLYWVISNLFQAIQ 251 >gi|297592153|gb|ADI46937.1| ALB3_1m [Volvox carteri f. nagariensis] Length = 455 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 125/259 (48%), Gaps = 34/259 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GW ++ M ++ F + + +G +I+L T+ VK+L +PL K+Q S ++ Sbjct: 108 GWVAPLSNAMEQVLYVFRDALDELHVPYAYGYSIILLTLVVKILTYPLVKQQVESALAVQ 167 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-- 448 ++P++D ++++F ++ ++ + LY+ +NPLAGC P L IPVF +Y ++ Sbjct: 168 ALKPRVDLIKDRFGDDTEKIRKETSV-LYEQAGVNPLAGCLPTLATIPVFIGLYTSLTNV 226 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIF---TLFG---ILPFYLPGFMHVGIWPIIMSLSMF 502 + + + WI LA PT + + G + PF + G +G W + + Sbjct: 227 ANGGLLDTQGFYWIPSLAG--PTTLAQRQSGLGTSWLFPF-VDGAPPIG-WGAAATYLVL 282 Query: 503 IQMK---------MSPPPADKG------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + ++ PP D Q ++L +P++ + + P+GL +Y+ + V Sbjct: 283 PVLLVLVQYVSSYLTNPPIDPNDENASMQRILLLGLPLMIGWFALNVPSGLSLYYLSNTV 342 Query: 548 ISIVQQAVIMKMHGAEIGL 566 +S QQ + K+ GA + + Sbjct: 343 LSAAQQVYLKKLGGARVSI 361 >gi|254556467|ref|YP_003062884.1| integral membrane protein [Lactobacillus plantarum JDM1] gi|300767190|ref|ZP_07077102.1| membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180409|ref|YP_003924537.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|254045394|gb|ACT62187.1| integral membrane protein [Lactobacillus plantarum JDM1] gi|300495009|gb|EFK30165.1| membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045900|gb|ADN98443.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 307 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 113/234 (48%), Gaps = 33/234 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPL----AKKQYVSTANM 389 +G+ Y ++AKP +M + L GN +G AI+ TV V+L+ P+ +K M Sbjct: 33 YGFVYEYLAKPGQNVMEWLSQLFGNNYGWAIIGLTVIVRLVLLPMMINQQRKSTYQQEKM 92 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 ++P++++++ + K + Q + A ++QLY+ + I+ G C P+L+Q+P+F A+ Sbjct: 93 SAVRPQMEKIQARQKAATTQEEKAAISNELMQLYRDNGISMTGGIGCLPLLIQLPIFSAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMF 502 Y I S E+ A F G ++ + I + L + G++ +G+ Sbjct: 153 YYAIRYSPELSKATFMG----ISLGKSSLILAILAFLSYLAQGYLSMIGL---------- 198 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K ++L PV+ +F S PAGL +Y+ + + +Q +I Sbjct: 199 ------PEEQKKTMRLMLIMSPVMILFVSMSAPAGLGLYFFVGGLFACLQTLII 246 >gi|306823999|ref|ZP_07457373.1| membrane protein OxaA [Bifidobacterium dentium ATCC 27679] gi|309801939|ref|ZP_07696053.1| membrane protein insertase, YidC/Oxa1 family [Bifidobacterium dentium JCVIHMP022] gi|304552997|gb|EFM40910.1| membrane protein OxaA [Bifidobacterium dentium ATCC 27679] gi|308221387|gb|EFO77685.1| membrane protein insertase, YidC/Oxa1 family [Bifidobacterium dentium JCVIHMP022] Length = 336 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 48/265 (18%) Query: 331 EMLID---WGWFYFIAKP----MFMLMSYFYNLVGNFG---------IAIMLTTVFVKLL 374 + L+D WGW Y + P M +M+ F+ + G ++I+ + V Sbjct: 6 QFLLDSGFWGWLYKLLTPIEWLMTQIMAIFHKFLTLLGMHPVGFSWVLSIIFLVLVVHAC 65 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPLAGC 430 FPL K S M+ IQPK+ ++ K+K Q+ + +Q+ M++LY+ ++ NP+ C Sbjct: 66 VFPLYYKTMKSMRKMQEIQPKMARIQNKYKGKNDQASKEAMQREMMKLYQDNDANPMGSC 125 Query: 431 WPILLQIPVFFAIYKVIS----ISLEMRHA--PFWGWIKDLAAADPTNIFTLF------G 478 P+L+Q P+F ++ +S I+ R A F D A A T+F Sbjct: 126 LPMLIQGPIFMCMFYTLSAIPYIARGKRAALGAF-----DQATALQFTKTTVFNTNVTDN 180 Query: 479 ILPFYLPGFMHVGIWPIIMSLSM-FIQ---MKMSPP---PADKG----QAMILNWMPVVF 527 + + G + + I+ +M + F+Q MK + P P K Q M+L P+++ Sbjct: 181 FMTANIGGKVVIAIFVALMCFCLWFMQYNNMKRNMPQNGPQTKQTEMMQKMMLWMFPIMY 240 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQ 552 +F+ ++ P +++YW +N++++ + Sbjct: 241 IFSGATMPFAVLVYWLANNILNLCR 265 >gi|307702545|ref|ZP_07639498.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037] gi|307623891|gb|EFO02875.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037] Length = 289 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 23/198 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I LRE++ L + M Sbjct: 57 SIGVGIILFTILIRTILLPVFQTQMVASRKMQEAQPRIKALREQYPGRDMESRTKLDQEM 116 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++YK I + WPIL+Q+PV A+++ +S ++ F WI +L D + Sbjct: 117 RKVYKELGIKHSSSLWPILIQMPVLLALFQALSRVDFLKTGHFL-WI-NLGGVDTSF--- 171 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFVFALSSF 534 +LP F + W +LS A G ++ MPV +FVFA+S+ Sbjct: 172 ---VLPILAAVFTFLSSWLSNKALS-------EKSGATTG---MMYGMPVLIFVFAISA- 217 Query: 535 PAGLIIYWSWSNVISIVQ 552 P+G+ +YW+ SN ++Q Sbjct: 218 PSGVALYWAVSNAYQVLQ 235 >gi|38372242|sp|Q8S339|ALB31_CHLRE RecName: Full=Inner membrane ALBINO3-like protein 1, chloroplastic; Flags: Precursor gi|20136422|gb|AAM11662.1|AF492768_1 albino3-like protein [Chlamydomonas reinhardtii] Length = 495 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G +I+L T+ VKLL +PL K+Q S ++ ++P+ID ++++F + ++ QK L Sbjct: 140 SYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGEDKDKI-QKETSVL 198 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y+ +NPLAGC P L IP+F ++ ++ G+ + A PT + Sbjct: 199 YEQAGVNPLAGCLPTLATIPIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMAMRQS 258 Query: 479 IL------PFYLPGFMHVG--------IWPIIMSLSMFIQMKMSPPPAD------KGQAM 518 L P G +G P+++ + ++ PP D Q Sbjct: 259 GLGTSWLWPLGPDGAPPIGWEDAAAYLTLPLLLVAVQYASSSVTSPPIDPKDENANTQRA 318 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +L ++P++ + + PAGL +Y+ + V+S Q + K+ GA + Sbjct: 319 LLVFLPLMVGWFSLNVPAGLSLYYLANTVLSSAIQIYLKKLGGANV 364 >gi|28378260|ref|NP_785152.1| integral membrane protein [Lactobacillus plantarum WCFS1] gi|38502980|sp|Q88WR8|OXAA2_LACPL RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|28271095|emb|CAD64000.1| integral membrane protein [Lactobacillus plantarum WCFS1] Length = 307 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 113/234 (48%), Gaps = 33/234 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPL----AKKQYVSTANM 389 +G+ Y ++AKP +M + L GN +G AI+ TV V+L+ P+ +K M Sbjct: 33 YGFVYEYLAKPGQNVMEWLSQLFGNNYGWAIIGLTVIVRLVLLPMMINQQRKSTYQQEKM 92 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 ++P++++++ + K + Q + A ++QLY+ + I+ G C P+L+Q+P+F A+ Sbjct: 93 SAVRPQMEKIQARQKAATTQEEKAAISNELMQLYRDNGISMTGGIGCLPLLIQLPIFSAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMF 502 Y I S E+ A F G ++ + I + L + G++ +G+ Sbjct: 153 YYAIRYSPELSKATFMG----ISLGKSSLILAILAFLSYLAQGYLSMIGL---------- 198 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K ++L PV+ +F S PAGL +Y+ + + +Q +I Sbjct: 199 ------PEEQKKTMRLMLIMSPVMILFVSMSAPAGLGLYFFVGGLFACLQTLII 246 >gi|171741737|ref|ZP_02917544.1| hypothetical protein BIFDEN_00828 [Bifidobacterium dentium ATCC 27678] gi|171277351|gb|EDT45012.1| hypothetical protein BIFDEN_00828 [Bifidobacterium dentium ATCC 27678] Length = 336 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 48/265 (18%) Query: 331 EMLID---WGWFYFIAKP----MFMLMSYFYNLVGNFG---------IAIMLTTVFVKLL 374 + L+D WGW Y + P M +M+ F+ + G ++I+ + V Sbjct: 6 QFLLDSGFWGWLYKLLTPIEWLMTQIMAIFHKFLTLLGMHPVGFSWVLSIIFLVLVVHAC 65 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPLAGC 430 FPL K S M+ IQPK+ ++ K+K Q+ + +Q+ M++LY+ ++ NP+ C Sbjct: 66 VFPLYYKTMKSMRKMQEIQPKMARIQNKYKGKNDQASKEAMQREMMKLYQDNDANPMGSC 125 Query: 431 WPILLQIPVFFAIYKVIS----ISLEMRHA--PFWGWIKDLAAADPTNIFTLF------G 478 P+L+Q P+F ++ +S I+ R A F D A A T+F Sbjct: 126 LPMLIQGPIFMCMFYTLSAIPYIARGKRAALGAF-----DQATALQFTKTTVFNTNVTDN 180 Query: 479 ILPFYLPGFMHVGIWPIIMSLSM-FIQ---MKMSPP---PADKG----QAMILNWMPVVF 527 + + G + + I+ +M + F+Q MK + P P K Q M+L P+++ Sbjct: 181 FMTANIGGKVVIAIFVALMCFCLWFMQYNNMKRNMPQNGPQTKQTEMMQKMMLWMFPIMY 240 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQ 552 +F+ ++ P +++YW +N++++ + Sbjct: 241 IFSGATMPFAVLVYWLANNILNLCR 265 >gi|229542318|ref|ZP_04431378.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1] gi|229326738|gb|EEN92413.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1] Length = 262 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 19/219 (8%) Query: 338 WFYFIAKPM-FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ ++++ L G++G++I+L T+ ++L PL Q S M+ +QP+I Sbjct: 36 WNQYIVYPLSWLIIKAAQFLGGSYGLSIILITIIIRLAILPLNITQLKSAKAMQALQPEI 95 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q LQ+ M++LY+ ++INP AGC PIL+Q+P+ Y I+ + + Sbjct: 96 KKLQEKYASKDAVTRQKLQQEMMKLYQEYHINPAAGCLPILIQMPILIGFYHAINRTPAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F W DL + D + + GI F M G + QMKM Sbjct: 156 RESAFL-WF-DLGSVDYV-LAVIAGITTFLQQKVMMSG-----GNYDANPQMKMQ----- 202 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M+L +MP++ + P+ L +YW N+ IVQ Sbjct: 203 --MNMMLWFMPIMIIVIGVGLPSALPLYWIVGNIFMIVQ 239 >gi|298490101|ref|YP_003720278.1| YidC/Oxa1 family lipolytic protein ['Nostoc azollae' 0708] gi|298232019|gb|ADI63155.1| membrane protein insertase, YidC/Oxa1 family ['Nostoc azollae' 0708] Length = 383 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 12/131 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY ++G+AI+ T+ ++ +PL+ S M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYGFFPSYGLAIVALTLIIRFALYPLSAGSIRSMRRMRVVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P ++ E++E++K PQ Q+ M+ + K NPLAGC P+LLQ+PV A++ Sbjct: 61 PVMQRRMAEIKERYKDD-PQKQQEEMVNVQKEFG-NPLAGCLPLLLQMPVLLALFAT--- 115 Query: 450 SLEMRHAPFWG 460 +R +PF G Sbjct: 116 ---LRGSPFAG 123 >gi|310288302|ref|YP_003939561.1| preprotein translocase subunit YidC [Bifidobacterium bifidum S17] gi|309252239|gb|ADO53987.1| preprotein translocase subunit YidC [Bifidobacterium bifidum S17] Length = 336 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 124/264 (46%), Gaps = 47/264 (17%) Query: 331 EMLID---WGWFYFIAKPMFMLMSY-------FYNLVGN--FGIAIMLTTVFVKLL---- 374 E L+D WGW Y + P+ LM+ F L+G GI+ +L VF+ L+ Sbjct: 6 EFLLDRGIWGWLYKLLTPLEWLMTQVMVLFHKFLTLLGMAPIGISWVLAIVFLVLVVHAC 65 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPLAGC 430 P+ KQ S M+ +QPK+ ++ K+K Q+ + + + M++LY+ ++ NP+ C Sbjct: 66 ILPIYLKQMKSMRKMQALQPKMQHIQNKYKGKKDQASKEAMSREMMKLYQDNDANPMGSC 125 Query: 431 WPILLQIPVFFAIYKVIS----ISLEMRHA--PFWGWIKDLAAADPTNIFTLFGILPFYL 484 W ++Q PVF ++ ++S I+ R A F D A A+ +FG+ Sbjct: 126 WTAVIQGPVFMCMFYMLSAIPYIATGKRGALGAF-----DQATAEQFAQTRVFGVSVTDT 180 Query: 485 ------PGFMHVGIWPIIMSLSM----FIQMKMSPPPAD------KGQAMILNWMPVVFV 528 G + +G + ++M M F M+ + P A K Q + P++++ Sbjct: 181 FGTANNSGKVVIGFFILLMCACMWYMQFNNMRKNLPKASMQGSTYKMQQAMTWGFPIMYI 240 Query: 529 FALSSFPAGLIIYWSWSNVISIVQ 552 F+ FP +++YW +N ++ + Sbjct: 241 FSGIMFPFAVLVYWLTNNACNLAR 264 >gi|330718059|ref|ZP_08312659.1| membrane protein OxaA [Leuconostoc fallax KCTC 3537] Length = 279 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 23/201 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ- 417 N+G I++ T+ V+LL PL S M+ +QPK+ L+ K+ + Q M + Sbjct: 64 NYGWGIVVFTIMVRLLILPLMVFSIGSMMKMQVVQPKLKALQAKYPGKDTESRQLMMAEQ 123 Query: 418 --LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 LYK +NP A P+++Q+P+ A+Y+ IS S E+R F W+ L DP Sbjct: 124 QALYKEAGVNPFASFLPLIVQMPILIALYQAISSSQELRSGEFL-WL-ALGNRDP----- 176 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSF 534 + ILP F W + M P G + ++ PVV F+ + Sbjct: 177 -YFILPILAAVFTFASSW-----------LSMQSNPDQSGVTKFMPYIFPVVIFFSALAV 224 Query: 535 PAGLIIYWSWSNVISIVQQAV 555 P+ L +YW SN Q V Sbjct: 225 PSALSLYWVVSNAFQTAQTLV 245 >gi|315611930|ref|ZP_07886848.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis ATCC 49296] gi|315315919|gb|EFU63953.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis ATCC 49296] Length = 277 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 25/199 (12%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF----KQSPPQVLQKA 414 + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I LRE++ +S Q L + Sbjct: 59 SIGVGIILFTILIRTILLPVFQTQMVASRKMQEAQPRIKALREQYPGRDMESRTQ-LDQE 117 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M ++YK I + WPIL+Q+PV A+++ +S ++ F WI +L D + Sbjct: 118 MRKVYKELGIKHSSSLWPILIQMPVLLALFQALSRVDFLKTGHFL-WI-NLGGVDTSF-- 173 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFVFALSS 533 +LP F + W +LS A G ++ MPV +FVFA+S+ Sbjct: 174 ----VLPILAAVFTFLSSWLSNKALS-------EKSGATTG---MMYGMPVLIFVFAISA 219 Query: 534 FPAGLIIYWSWSNVISIVQ 552 P+G+ +YW+ SN ++Q Sbjct: 220 -PSGVALYWAVSNAYQVLQ 237 >gi|308174180|ref|YP_003920885.1| Sec-independent factor for membrane protein insertion [Bacillus amyloliquefaciens DSM 7] gi|307607044|emb|CBI43415.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus amyloliquefaciens DSM 7] gi|328554124|gb|AEB24616.1| OxaA-like protein precursor [Bacillus amyloliquefaciens TA208] gi|328912515|gb|AEB64111.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus amyloliquefaciens LL3] Length = 278 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 32/218 (14%) Query: 358 GNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMKNIQPKIDELREKFKQS----PPQ 409 G +G++I+L T+ V+++ PL KKQ V M I+P++D ++ K K++ + Sbjct: 63 GEYGLSIILVTIIVRIVVLPLFVNQFKKQRVFQEKMAVIKPQVDSIQAKMKKTKDAEKQK 122 Query: 410 VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVISISLEM-RHAPFWGWIKDLAA 467 LQ M++LY+ HN+NP+A GC P+L+Q P+ Y I + E+ H+ W + Sbjct: 123 ELQMEMMKLYREHNLNPMAMGCLPMLVQFPILIGFYYAIRSTPEIASHSFLW-----FSL 177 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP----PPADKGQAMILNWM 523 + +L ++L + +S + K SP P A + +++ Sbjct: 178 GHSDMLVSLCAGAMYFLQAY-----------VSQKLNEKYSPAAQNPAAMQSAKIMVFIF 226 Query: 524 PVVF-VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 PV+ VF+L + PA L +YW S + VQ ++ + H Sbjct: 227 PVMMTVFSL-NVPAALPLYWFTSGLFLTVQNVLLQQTH 263 >gi|56750083|ref|YP_170784.1| putative inner membrane protein translocase component YidC [Synechococcus elongatus PCC 6301] gi|81300426|ref|YP_400634.1| putative inner membrane protein translocase component YidC [Synechococcus elongatus PCC 7942] gi|56685042|dbj|BAD78264.1| preprotein translocase YidC subunit [Synechococcus elongatus PCC 6301] gi|81169307|gb|ABB57647.1| inner membrane protein-like [Synechococcus elongatus PCC 7942] Length = 392 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 75/129 (58%), Gaps = 12/129 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK--- 390 +D+G + + M ++ +FY LV ++G+AI+ T+ +++ +PL+ + M+ Sbjct: 1 MDFGIGFLSSNVMLPILDFFYGLVPSYGLAIIALTLVIRIALYPLSAGAIRNARRMRIAN 60 Query: 391 -NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +Q + E+RE++ P + LQ+ +L+K NPLAGC+P+LLQ+P+ FA++ Sbjct: 61 PVMQKRQQEIRERYANDPSK-LQEETAKLFKEFG-NPLAGCFPLLLQMPLLFALFAT--- 115 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 116 ---LRGSPF 121 >gi|322515972|ref|ZP_08068912.1| SpoIIIJ family protein [Streptococcus vestibularis ATCC 49124] gi|322125571|gb|EFX96906.1| SpoIIIJ family protein [Streptococcus vestibularis ATCC 49124] Length = 284 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 25/189 (13%) Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINP 426 T+ ++ + PL +Q S+ ++ +QP++ L+ ++ + + L A +LYK H +NP Sbjct: 78 TILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYAQQELYKEHGVNP 137 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 A P+++Q P+ A+Y ++ E+R F W+ DL DP + ILP Sbjct: 138 YASLLPLIIQFPILMALYGALTRVPELREGTFL-WV-DLGQKDP------YFILPILAAA 189 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL--NWMPVVFVFALSS-FPAGLIIYWS 543 F + W ++ A AM+L N M +F+F + +G+ +YW+ Sbjct: 190 FTFLSTW-------------LTNKAAKDRSAMLLVMNIMLSIFIFWFGTQISSGVALYWA 236 Query: 544 WSNVISIVQ 552 SN +VQ Sbjct: 237 VSNAFQVVQ 245 >gi|325567645|ref|ZP_08144312.1| stage III sporulation protein J [Enterococcus casseliflavus ATCC 12755] gi|325159078|gb|EGC71224.1| stage III sporulation protein J [Enterococcus casseliflavus ATCC 12755] Length = 274 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 23/203 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV---LQKA 414 GN GI I+L T+ ++++ PL Q S + +QPK+ L++++ + L++ Sbjct: 55 GNAGIGIILFTLIIRVILMPLMHFQTKSMRKTQELQPKLKALQQQYASKDTETQSKLKEE 114 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY +N+NP AGC P+L+Q+P+ A+++ IS ++ F W++ L DP Sbjct: 115 TQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPALQEGKFL-WLQ-LGDRDP---- 168 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSS 533 + ILP F + LS Q++ I+N+ MP++ + + Sbjct: 169 --YFILPILAALFTFASTY-----LSSMSQVE------SNASLKIMNFAMPMMILLMGIN 215 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 +GL +YW SN ++Q ++ Sbjct: 216 IASGLSLYWVVSNAFQVLQTMIL 238 >gi|294846010|gb|ADF43168.1| ALB3m [Chlamydomonas reinhardtii] Length = 493 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G +I+L T+ VKLL +PL K+Q S ++ ++P+ID ++++F + ++ QK L Sbjct: 138 SYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGEDKDKI-QKETSVL 196 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y+ +NPLAGC P L IP+F ++ ++ G+ + A PT + Sbjct: 197 YEQAGVNPLAGCLPTLATIPIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMAMRQS 256 Query: 479 IL------PFYLPGFMHVG--------IWPIIMSLSMFIQMKMSPPPAD------KGQAM 518 L P G +G P+++ + ++ PP D Q Sbjct: 257 GLGTSWLWPLGPDGAPPIGWEDAAAYLTLPLLLVAVQYASSSVTSPPIDPKDENANTQRA 316 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +L ++P++ + + PAGL +Y+ + V+S Q + K+ GA + Sbjct: 317 LLVFLPLMVGWFSLNVPAGLSLYYLANTVLSSAIQIYLKKLGGANV 362 >gi|159477094|ref|XP_001696646.1| inner membrane ALBINO3-like protein 1 [Chlamydomonas reinhardtii] gi|158282871|gb|EDP08623.1| inner membrane ALBINO3-like protein 1 [Chlamydomonas reinhardtii] gi|294845969|gb|ADF43128.1| ALB3p [Chlamydomonas reinhardtii] Length = 495 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G +I+L T+ VKLL +PL K+Q S ++ ++P+ID ++++F + ++ QK L Sbjct: 140 SYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGEDKDKI-QKETSVL 198 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y+ +NPLAGC P L IP+F ++ ++ G+ + A PT + Sbjct: 199 YEQAGVNPLAGCLPTLATIPIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMAMRQS 258 Query: 479 IL------PFYLPGFMHVG--------IWPIIMSLSMFIQMKMSPPPAD------KGQAM 518 L P G +G P+++ + ++ PP D Q Sbjct: 259 GLGTSWLWPLGPDGAPPIGWEDAAAYLTLPLLLVAVQYASSSVTSPPIDPKDENANTQRA 318 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +L ++P++ + + PAGL +Y+ + V+S Q + K+ GA + Sbjct: 319 LLVFLPLMVGWFSLNVPAGLSLYYLANTVLSSAIQIYLKKLGGANV 364 >gi|270290419|ref|ZP_06196644.1| preprotein translocase YidC subunit [Pediococcus acidilactici 7_4] gi|270281200|gb|EFA27033.1| preprotein translocase YidC subunit [Pediococcus acidilactici 7_4] Length = 322 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 115/233 (49%), Gaps = 31/233 (13%) Query: 336 WGWFYF-IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANM 389 +G+ Y +A PM M Y +LVG ++G+AI+L T V+L+ PL ++K V M Sbjct: 33 YGFIYDNLAVPMQHFMDYLSHLVGGSYGLAIILITFVVRLILLPLMVNQSRKATVQQEKM 92 Query: 390 KNIQPKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 IQP++ L+E+ + ++P + + + M+ LY+ +NI+ G C P+L+Q PVF A+ Sbjct: 93 SYIQPQLKVLQERNQTAKTPEEKAAVSQEMMALYRDNNISMTGGIGCLPLLIQFPVFAAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ F G DL+ + F + + L G++ P +M Sbjct: 153 YAAIQYSPELHQGIFLGI--DLSKSSLLLSIISFLV--YLLQGWLGTLGVPEEQRKTMRS 208 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M +SP M + F F S PAGL +Y++ V + +Q +I Sbjct: 209 MMVISP------------LMILFFTF---STPAGLGLYFAVGGVFACIQTLLI 246 >gi|255326485|ref|ZP_05367567.1| 60 kDa inner membrane insertion protein [Rothia mucilaginosa ATCC 25296] gi|255296525|gb|EET75860.1| 60 kDa inner membrane insertion protein [Rothia mucilaginosa ATCC 25296] Length = 329 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 30/219 (13%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 + I+ T+ ++ L PL KQ + M +Q + +L+EK+K Q+ ++AM Q Sbjct: 41 LCIIFLTLVMRTLTIPLFVKQIKAMRGMTAMQGDMAKLQEKYKGKKDQLSRQAMAQEQME 100 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT-- 475 +Y+ H NP A C PIL Q+P+FF +Y+V+ + + A + AD + F Sbjct: 101 MYRKHGTNPFASCLPILAQMPIFFGLYQVL---MGVPTAAQSNESVLMLPADLVHQFNDS 157 Query: 476 -LFGILPFYL---PG-------FMHVGIWPIIMSLSMF-IQMKMSPP---------PADK 514 +FG F PG + I ++MS + F IQ ++S P + Sbjct: 158 QIFGAQLFATMLHPGAGDTTATVVQAVIMIVLMSATQFYIQKQLSVKNMSEAALNSPMFR 217 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 Q MI+ P++F + +FP G++ YW+ SN+ S+ QQ Sbjct: 218 QQQMIMYIFPIIFAVSGINFPLGVMYYWTVSNLWSLGQQ 256 >gi|293191008|ref|ZP_06609052.1| membrane protein OxaA [Actinomyces odontolyticus F0309] gi|292820695|gb|EFF79661.1| membrane protein OxaA [Actinomyces odontolyticus F0309] Length = 446 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 29/209 (13%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 ++I+L T+ V++ PL KQ S+ M+ IQP++ +++EK+K QV ++ M++ Sbjct: 39 LSIVLLTILVRIAIIPLFLKQIRSSRAMQAIQPEMRKIQEKYKGKKDQVSRQKMMEETQA 98 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRHAPFWGWIKD----LAAADPT 471 L + H ++P A C P+L+Q+PV F +Y+ I S+ + G D L + T Sbjct: 99 LQRKHKVSPFASCLPMLVQMPVLFGMYRAIIAVSSISNGTYTYRGEATDHLGPLTESVST 158 Query: 472 NIF--TLFGI-LPFYL------PGFMHVGIWPII-MSLSMFIQMKMS---------PPPA 512 I T+ G+ L L P + V I I+ M + F+ M++S P Sbjct: 159 EIVNSTVLGVPLSHTLRESWGQPTIVAVFIAAIVLMVVLQFVSMRLSFSRNMPDMGDNPM 218 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIY 541 + Q ++ MP++F+F+ + F G+++Y Sbjct: 219 AQSQRSMMYVMPLMFIFSGAFFQMGVVVY 247 >gi|282901452|ref|ZP_06309377.1| 60 kDa inner membrane insertion protein [Cylindrospermopsis raciborskii CS-505] gi|281193731|gb|EFA68703.1| 60 kDa inner membrane insertion protein [Cylindrospermopsis raciborskii CS-505] Length = 389 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 73/131 (55%), Gaps = 12/131 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY + ++G+AI+ T+ ++ +PL+ S M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYGVFPSYGLAIVALTLIIRFALYPLSAGSIRSMRRMRIVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P ++ E++E++K PQ Q+ M+ + K NPLAGC P+LLQ+PV A++ Sbjct: 61 PVMQKRMAEIKERYKDD-PQKQQEEMVNVQKEFG-NPLAGCLPLLLQMPVLLALFAT--- 115 Query: 450 SLEMRHAPFWG 460 +R +PF G Sbjct: 116 ---LRGSPFAG 123 >gi|296333458|ref|ZP_06875911.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675036|ref|YP_003866708.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. spizizenii str. W23] gi|296149656|gb|EFG90552.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413280|gb|ADM38399.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. spizizenii str. W23] Length = 275 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 112/239 (46%), Gaps = 22/239 (9%) Query: 333 LIDWGWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLA----KKQYVST 386 L + G+F+ ++ +P L+ L G +G++I+L T+ V+++ PL KKQ + Sbjct: 34 LSNVGFFHDYLIEPFSALLKGVAGLFHGEYGLSIILVTIIVRVVVLPLFVNQFKKQRIFQ 93 Query: 387 ANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFF 441 M I+P++D ++ K K++ + LQ M++LY+ HNINPLA GC P+L+Q P+ Sbjct: 94 EKMAVIKPQVDSIQAKLKKTKDPEKQKELQMEMMKLYQEHNINPLAMGCLPMLIQFPIVI 153 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y I + E+ F W L +D IL G M+ + LS Sbjct: 154 GFYYAIRSTPEIASHSFL-WF-SLGQSD---------ILVSLSAGAMYFIQAYVAQKLSA 202 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P A + +++ PV+ + PA L +YW S + VQ V+ H Sbjct: 203 KYSAVPQNPAAQQSAKLMVFIFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNIVLQMTH 261 >gi|312862441|ref|ZP_07722684.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus vestibularis F0396] gi|311102084|gb|EFQ60284.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus vestibularis F0396] Length = 284 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 25/189 (13%) Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINP 426 T+ ++ + PL +Q S+ ++ +QP++ L+ ++ + + L A +LYK H +NP Sbjct: 78 TILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYAQQELYKEHGVNP 137 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 A P+++Q P+ A+Y ++ E+R F W+ DL DP + ILP Sbjct: 138 YASLLPLIIQFPILMALYGALTRVPELREGTFL-WV-DLGQKDP------YFILPILAAA 189 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL--NWMPVVFVFALSS-FPAGLIIYWS 543 F + W ++ A AM+L N M +F+F + +G+ +YW+ Sbjct: 190 FTFLSTW-------------LTNKAAKDRSAMLLVMNIMLSIFIFWFGTQISSGVALYWA 236 Query: 544 WSNVISIVQ 552 SN +VQ Sbjct: 237 VSNAFQVVQ 245 >gi|227432921|ref|ZP_03914864.1| stage III sporulation protein J precursor [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351322|gb|EEJ41605.1| stage III sporulation protein J precursor [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 278 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 26/206 (12%) Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 S+F N N+G+ I+L T+F++ L PL Q S M+ +QP + EL+ K+ + Sbjct: 59 SWFGN---NYGMGIILFTIFIRFLILPLMVYQVQSMMKMQVVQPALKELQAKYPGKDTES 115 Query: 411 LQKAMIQ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q M + LYK +NP A P+++Q+P+ A+Y+ I S +R F W++ L + Sbjct: 116 RQLMMAEQQALYKDAGVNPFASMLPLIVQMPILIALYQSIWNSPVLRSGKFL-WLQ-LGS 173 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVV 526 DP + ILP F W + M P G + ++ PV+ Sbjct: 174 NDP------YFILPVLAALFTFASSW-----------LSMQSNPDQNGMTKAMPYIFPVI 216 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQ 552 F+ + P+ L +YW N VQ Sbjct: 217 IFFSAVAVPSALSLYWVVGNAFQTVQ 242 >gi|304404107|ref|ZP_07385769.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus curdlanolyticus YK9] gi|304347085|gb|EFM12917.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus curdlanolyticus YK9] Length = 280 Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 30/219 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMKNIQPKIDELREKFKQ----SPPQ 409 G++G++I++ T+ V+L+ PL +Q A MK + P+++ ++EK+K + Sbjct: 67 GSYGLSIIVITLLVRLILMPLMIRQQTGQLAMRAKMKTLTPELNAVKEKYKSKKDAESQR 126 Query: 410 VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 LQ+ +QLY+ H +NPLA GC P+L+Q+P+ +Y I ++ E++ F W K L +A Sbjct: 127 KLQQETMQLYQQHGVNPLAIGCLPLLIQLPILTGLYYAIRMTPELKTHAFL-WFK-LGSA 184 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVV 526 DP I+PF G + + F+ ++S A K AM++ P++ Sbjct: 185 DP--------IMPFIAAG---------VYLIQSFVSQRLSGSDASQQKQMAMLMYLSPIM 227 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + PA L +YW+ V I Q + +++ G Sbjct: 228 MGLFSFTAPAALPLYWAVGGVFMIGQSWLAYRLYHRRTG 266 >gi|295836812|ref|ZP_06823745.1| preprotein translocase YidC subunit [Streptomyces sp. SPB74] gi|295826217|gb|EDY44441.2| preprotein translocase YidC subunit [Streptomyces sp. SPB74] Length = 291 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 25/214 (11%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T V+LL PLA+ + P+I LR + + P + L++A+++L+ H Sbjct: 41 IVVLTACVRLLLLPLARTAARGQRERARLAPEIAALRRTYAKDP-ERLRRALVELHTRHG 99 Query: 424 INPLAGCWPILLQIPVFFAIYKVIS-----------ISLEMRHAPFWG-WIKDLAAADPT 471 ++PL G P+L Q+P FF +Y V S +S + AP W LA Sbjct: 100 VSPLGGVLPMLCQLPFFFVLYHVFSSSRIGGEPNGLLSHRLLAAPLGDRWSDALAHG--- 156 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP----PADKGQAMILNWMPVVF 527 +F G++ YL F V + + S Q+ S P P G A + MP Sbjct: 157 GLFGARGLV--YLALFALVAVVATLSSRRNRRQLAGSGPAPEGPQVPGAAALTRLMPYAA 214 Query: 528 VFALSS---FPAGLIIYWSWSNVISIVQQAVIMK 558 F L S P +Y + S S V++AV+ + Sbjct: 215 YFTLISVAVVPLAGALYLATSTTWSAVERAVLYR 248 >gi|282898270|ref|ZP_06306261.1| 60 kDa inner membrane insertion protein [Raphidiopsis brookii D9] gi|281196801|gb|EFA71706.1| 60 kDa inner membrane insertion protein [Raphidiopsis brookii D9] Length = 389 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 73/131 (55%), Gaps = 12/131 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY + ++G+AI+ T+ ++ +PL+ S M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYGVFPSYGLAIVALTLIIRFALYPLSAGSIRSMRRMRIVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P ++ E++E++K PQ Q+ M+ + K NPLAGC P+LLQ+PV A++ Sbjct: 61 PLMQKRMAEIKERYKDD-PQKQQEEMVNVQKEFG-NPLAGCLPLLLQMPVLLALFAT--- 115 Query: 450 SLEMRHAPFWG 460 +R +PF G Sbjct: 116 ---LRGSPFAG 123 >gi|332365176|gb|EGJ42939.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK1059] Length = 271 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 21/207 (10%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I L+EK+ Sbjct: 47 FLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESRT 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L + +LYK +NP A P+ +Q+PV A+++ ++ M+ F W+ +L A D Sbjct: 107 ALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDFMKTGHFL-WL-NLGATD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT I L L F + W +L P + G +++ +PV F Sbjct: 165 PTFILPLLAAL------FTFLSTWLSNKAL----------PERNGGMTVMMYLLPVAIFF 208 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 +G+ +YW+ SN +VQ ++ Sbjct: 209 FAFYAASGVALYWAVSNAYQVVQTLLL 235 >gi|303237161|ref|ZP_07323731.1| membrane protein insertase, YidC/Oxa1 family [Prevotella disiens FB035-09AN] gi|302482548|gb|EFL45573.1| membrane protein insertase, YidC/Oxa1 family [Prevotella disiens FB035-09AN] Length = 638 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 126/575 (21%), Positives = 241/575 (41%), Gaps = 86/575 (14%) Query: 31 EEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKG 86 + + N +K + K+ Q N A D A A + + LKN + ++N KG Sbjct: 40 DSIANAKKIAKQKKEVAQTANKTIAANADTTALFYAAANGTAQNIVLKNNKVELTLNTKG 99 Query: 87 AQFDDLNLRGY------HLDVSSNSPIVTLLSPSNTKNAYFAELDYV--STANNIELPNS 138 ++GY D ++ VTL S ++ EL+++ + +NIE N Sbjct: 100 GVVRQAIIKGYTGHNVTSKDRKTDKQDVTLFSGAD------QELNFILATKQDNIETKNM 153 Query: 139 NTVWNLISGKILTPTTPIK------LVFKNANNILFERTI-SLDEHYLFK------IVDT 185 + ++ +T T K L +K + L I + + LFK ++D Sbjct: 154 YFTPSNVTDSTVTLTATDKSGKTLVLDYKLKSPYLLSLNIKATGMNGLFKPGENQLLIDW 213 Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 ++ ++ R AT T+ EG L + + EK++ Sbjct: 214 QEKCKQQELGYTFENRY-------ATLTYKESEGSTDYLSETK-------EDEKAT---- 255 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDGHARYQAKFSANEITILPGKSITT 304 E W+ ++++++V I + ++ K + + Y ++ A+ T Sbjct: 256 EERLDWVAFKNQFFSAVMISKDGFAIGAKLKSIPQQKESHYLKQYHASMNTAFDPTGAKA 315 Query: 305 TNFLFA-GAKEFPTIHHYEKDLAIPR---FEMLIDWGWFYFIAKPMFMLMS-----YFYN 355 + F F G +F + E + + L+ GW P+F +++ Y ++ Sbjct: 316 SQFEFYFGPNDFRLLQSVENQSTFGKSLDMQRLVYLGW------PLFRIINRWFTIYVFD 369 Query: 356 LVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVL 411 + G+ ++L T+ +K + FP+ KK Y+S+A M+ ++PK+DE +++ K Sbjct: 370 WLSKLFPMGVVLILITLLLKFITFPMVKKSYMSSAKMRVLKPKLDEATKQYNKPEDQMQK 429 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP- 470 Q+AM+Q+Y + ++PL+GC P+L+Q P++ A++ + ++++R F W+ DL+ DP Sbjct: 430 QQAMMQMYSEYGVSPLSGCLPMLIQAPIWIAMFNFVPNAIQLRGEKFL-WMDDLSTFDPI 488 Query: 471 ----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW---- 522 N++ + + F I+ S Q K Q + W Sbjct: 489 ISWSQNLWIIGDHISLTCILFCATN---ILYSWFTMQQQKDQMVGQQAEQMKTMQWMMYL 545 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 MPV F F + + +GL Y+ IS+ A IM Sbjct: 546 MPVFFFFMFNDYSSGLNFYY----FISLFFSAAIM 576 >gi|322386704|ref|ZP_08060329.1| ParB/SpoJ family partitioning protein [Streptococcus cristatus ATCC 51100] gi|321269377|gb|EFX52312.1| ParB/SpoJ family partitioning protein [Streptococcus cristatus ATCC 51100] Length = 273 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 32/223 (14%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YF A+ M F + G+ GI I+L T+ ++ + P+ + Q S+ M+ +QP I +L Sbjct: 41 YFFAE-----MIQFLSFNGSTGIGIILFTLIIRTVLLPVFQFQTTSSRKMQEVQPHIKKL 95 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EK+ L + +LYK +NP A P+ +Q+PV A+++ ++ +E Sbjct: 96 QEKYPGKDMDSRAALAEETSKLYKEMGVNPYAAFLPLFIQMPVLVALFQALT-RVEFLKT 154 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W+ +L DPT I PI+ +L F +S P + Sbjct: 155 GHFLWL-NLGTTDPTFIL-------------------PILAALFTFFSTWLSNKALPEKN 194 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 G A++ MPV+ F +G+ +YW+ SN + Q ++ Sbjct: 195 GGTAVMTYLMPVLIFFFAVYAASGVALYWTVSNAYQVGQTLLL 237 >gi|291444979|ref|ZP_06584369.1| membrane protein [Streptomyces roseosporus NRRL 15998] gi|291347926|gb|EFE74830.1| membrane protein [Streptomyces roseosporus NRRL 15998] Length = 246 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L T V+L PL++ +QP+I ELR+K ++P + +QKA+++L+ Sbjct: 21 AIILFTALVRLAVHPLSRAAARGQKARSRLQPQIAELRKKHGRNP-ERMQKAIMELHAAE 79 Query: 423 NINPLAGCWPILLQIPVFFAIYKVIS-----------ISLEMRHAPFWG-WIKDLAAADP 470 ++PL+GC P LLQ+P FF +Y + S +S ++ AP G W LA Sbjct: 80 KVSPLSGCLPSLLQMPAFFLLYHLFSSSSIGGEPNALLSHDLLGAPLGGRWHDALAHGG- 138 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 PF G +++G++ I+ +++ F Sbjct: 139 ----------PFGGQGLVYLGLFVIVAAVATF 160 >gi|331265592|ref|YP_004325222.1| preprotein translocase subunit YidC1 [Streptococcus oralis Uo5] gi|326682264|emb|CBY99881.1| preprotein translocase subunit YidC1 [Streptococcus oralis Uo5] Length = 277 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 23/198 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I LRE++ L + M Sbjct: 59 SIGVGIILFTILIRTILLPVFQTQMVASRKMQEAQPRIKALREQYPGRDMESRTKLDQEM 118 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++YK I + WPIL+Q+PV A+++ +S ++ F WI +L D + Sbjct: 119 RKVYKELGIKHSSSLWPILIQMPVLLALFQALSRVDFLKTGHFL-WI-NLGGVDTSF--- 173 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFVFALSSF 534 +LP F + W +LS A G ++ MPV +FVFA+S+ Sbjct: 174 ---VLPILAAVFTFLSSWLSNKALS-------EKSGATTG---MMYGMPVLIFVFAISA- 219 Query: 535 PAGLIIYWSWSNVISIVQ 552 P+G+ +YW+ SN ++Q Sbjct: 220 PSGVALYWAVSNAYQVLQ 237 >gi|116619134|ref|YP_819505.1| preprotein translocase subunit YidC [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097981|gb|ABJ63132.1| Preprotein translocase subunit YidC [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 278 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 26/206 (12%) Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 S+F N N+G+ I+L T+F++ L PL Q S M+ +QP + EL+ K+ + Sbjct: 59 SWFGN---NYGMGIILFTIFIRFLILPLMVYQVQSMMKMQVVQPALKELQAKYPGKDTES 115 Query: 411 LQKAMIQ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q M + LYK +NP A P+++Q+P+ A+Y+ I S +R F W++ L + Sbjct: 116 RQLMMAEQQALYKDAGVNPFASMLPLIVQMPILIALYQSIWNSPVLRSGKFL-WLQ-LGS 173 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVV 526 DP + ILP F W + M P G + ++ PV+ Sbjct: 174 NDP------YFILPVLAALFTFASSW-----------LSMQSNPDQNGMTKAMPYIFPVI 216 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQ 552 F+ + P+ L +YW N VQ Sbjct: 217 IFFSALAVPSALSLYWVVGNAFQTVQ 242 >gi|186682017|ref|YP_001865213.1| inner membrane protein translocase component YidC [Nostoc punctiforme PCC 73102] gi|186464469|gb|ACC80270.1| 60 kDa inner membrane insertion protein [Nostoc punctiforme PCC 73102] Length = 383 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 74/129 (57%), Gaps = 12/129 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ V+ +PL+ + M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYGIVPSYGLAIVALTLIVRFALYPLSAGSIRNMRKMRIVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P ++ E++E++K PQ Q+ M+ + K NPLAGC+P+L+Q+PV A++ Sbjct: 61 PLMQKRMAEIKERYKDE-PQKQQEEMVNVQKEFG-NPLAGCFPLLVQMPVLLALFAT--- 115 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 116 ---LRGSPF 121 >gi|293364547|ref|ZP_06611270.1| SpoJ protein [Streptococcus oralis ATCC 35037] gi|322376167|ref|ZP_08050675.1| SpoIIIJ family protein [Streptococcus sp. C300] gi|291316959|gb|EFE57389.1| SpoJ protein [Streptococcus oralis ATCC 35037] gi|321278849|gb|EFX55894.1| SpoIIIJ family protein [Streptococcus sp. C300] Length = 277 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 23/198 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I LRE++ L + M Sbjct: 59 SIGVGIILFTILIRTILLPVFQTQMVASRKMQEAQPRIKALREQYPGRDMESRTKLDQEM 118 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++YK I + WPIL+Q+PV A+++ +S ++ F WI +L D + Sbjct: 119 RKVYKELGIKHSSSLWPILIQMPVLLALFQALSRVDFLKTGHFL-WI-NLGGVDTSF--- 173 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFVFALSSF 534 +LP F + W +LS A G ++ MPV +FVFA+S+ Sbjct: 174 ---VLPILAAVFTFLSSWLSNKALS-------EKSGATTG---MMYGMPVLIFVFAISA- 219 Query: 535 PAGLIIYWSWSNVISIVQ 552 P+G+ +YW+ SN ++Q Sbjct: 220 PSGVALYWAVSNAYQVLQ 237 >gi|170018056|ref|YP_001728975.1| preprotein translocase subunit YidC [Leuconostoc citreum KM20] gi|169804913|gb|ACA83531.1| Preprotein translocase subunit YidC [Leuconostoc citreum KM20] Length = 279 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 23/198 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ- 417 N+G+ I++ T+ ++ L PL Q S M+ +QP + L+ K+ + Q M + Sbjct: 64 NYGLGIIVFTILIRFLILPLMVYQIQSMMKMQVVQPALKALQAKYPGKDTESRQLMMAEQ 123 Query: 418 --LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 LYK +NP A P+++Q+PV FA+Y+ I S ++ F W++ L + DP Sbjct: 124 QALYKKEGVNPFASMLPLIVQMPVLFALYQSIYNSPVLKSGKFL-WLQ-LGSHDP----- 176 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSF 534 + +LP F W + M P G + ++ PVV F+ + Sbjct: 177 -YYVLPVLAAVFTFASSW-----------LSMQSTPEQNGMTKAMPYIFPVVIFFSAMAV 224 Query: 535 PAGLIIYWSWSNVISIVQ 552 P+ L +YW N+ +Q Sbjct: 225 PSALSLYWVVGNLFQTIQ 242 >gi|23465227|ref|NP_695830.1| hypothetical protein BL0644 [Bifidobacterium longum NCC2705] gi|189440301|ref|YP_001955382.1| preprotein translocase subunit [Bifidobacterium longum DJO10A] gi|239622847|ref|ZP_04665878.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|317482355|ref|ZP_07941375.1| YidC/Oxa1 family membrane protein insertase [Bifidobacterium sp. 12_1_47BFAA] gi|38503029|sp|Q8G6J6|OXAA_BIFLO RecName: Full=Membrane protein oxaA gi|23325856|gb|AAN24466.1| conserved hypothetical transmembrane protein in the 60 kDa inner membrane protein family [Bifidobacterium longum NCC2705] gi|189428736|gb|ACD98884.1| Preprotein translocase subunit [Bifidobacterium longum DJO10A] gi|239514844|gb|EEQ54711.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|316916235|gb|EFV37637.1| YidC/Oxa1 family membrane protein insertase [Bifidobacterium sp. 12_1_47BFAA] Length = 335 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 123/265 (46%), Gaps = 48/265 (18%) Query: 331 EMLID---WGWFYFIAKPMFMLMSYFYNLVGNFGI-------------AIMLTTVFVKLL 374 E L+D WG+ Y I P+ L ++ +V +F + AI++ + V+ Sbjct: 5 EFLLDSGFWGFLYKILTPVEWLQTWIMKIVHDFFVMLGVSPIGVSWVLAIIILVLVVQAC 64 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGC 430 FPL KQ S M+ + PK+ ++ K+K Q ++AM ++LY+ +++NP C Sbjct: 65 IFPLFYKQMKSMRKMQALAPKMQRIQNKYKGKTDQASREAMSRETMKLYQDNDVNPAGSC 124 Query: 431 WPILLQIPVFFAIYKVIS----ISLEMRHA--PFWGWIKDLAAADPTNIFTLFGILPF-- 482 P+L+Q PVF +++ +S I+ R A F D+A A +FGI+ Sbjct: 125 LPMLIQGPVFMSMFYTLSAIPYIANGKRDALGAF-----DVATAKQFTQTDVFGIVSVTD 179 Query: 483 -----YLPGFMHVGIWPIIMSLSM----FIQMKMSPPPA------DKGQAMILNWMPVVF 527 G +GI+ +M + + MK + A + Q +L PV++ Sbjct: 180 NFTSAAASGKAVIGIFVFLMCFCLWFMQYFSMKRNMAAASMNKQTETMQKAMLWLFPVMY 239 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQ 552 +F+ + P +++YW +NV ++ + Sbjct: 240 IFSGVAMPFAVLVYWLTNNVCNLCR 264 >gi|29831751|ref|NP_826385.1| hypothetical protein SAV_5208 [Streptomyces avermitilis MA-4680] gi|29608868|dbj|BAC72920.1| putative membrane protein [Streptomyces avermitilis MA-4680] Length = 243 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 35/218 (16%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T V+LL PL++ +QP++ ELR+K ++P + LQKA+++L+ Sbjct: 28 IVLFTALVRLLVHPLSRASARGQRARARLQPQVAELRKKHGKNP-EKLQKALLELHAEEK 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVIS---ISLE----MRHAPFWGWIKDL---AAADPTNI 473 ++PL+GC P L Q+P FF +Y + S I E + H F + D A D Sbjct: 87 VSPLSGCLPGLFQLPAFFLLYHLFSNTTIGGEGNELLTHTLFTAPLGDRWADALGDGG-- 144 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMF------IQMKMSPPPADKGQ------AMILN 521 PF G +++G++ I+ +++ F M +P P G+ I Sbjct: 145 -------PFGTQGLVYLGLFAIVAAVATFNYRRTKRTMAANPLPVGDGEQQVPGLGAINR 197 Query: 522 WMPVVFVFALSS---FPAGLIIYWSWSNVISIVQQAVI 556 +MP++ F L + P +Y S S V++A + Sbjct: 198 FMPLMSFFTLFTVAFVPLAAALYVVTSTTWSAVERAAL 235 >gi|326692346|ref|ZP_08229351.1| preprotein translocase subunit YidC [Leuconostoc argentinum KCTC 3773] Length = 279 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 23/198 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ- 417 N+G+ I++ T+ ++ L PL Q S M+ +QP + L+ K+ + Q M + Sbjct: 64 NYGMGIIIFTILIRFLILPLMVYQVHSMMKMQGVQPALKALQAKYPGKDTESRQLMMAEQ 123 Query: 418 --LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 LYK +NP A P+++Q+PV A+Y+ I S ++ F W++ L + DP Sbjct: 124 QALYKEAGVNPFASLLPLIVQMPVLIALYQAIYTSPVLKSGKFL-WLQ-LGSHDP----- 176 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSF 534 + +LP F W + M P G + ++ PVV F+ + Sbjct: 177 -YYVLPILAAVFTFASSW-----------LSMQSTPEQNGMTKAMPYIFPVVIFFSAIAV 224 Query: 535 PAGLIIYWSWSNVISIVQ 552 P+ L +YW NV +Q Sbjct: 225 PSALSLYWVVGNVFQTIQ 242 >gi|295103712|emb|CBL01256.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Faecalibacterium prausnitzii SL3/3] Length = 353 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 69/273 (25%), Positives = 114/273 (41%), Gaps = 48/273 (17%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +FY ++ P+ +M + Y L+ N+G I+L T+ + ++ PL Q S A M QP I Sbjct: 3 FFYILSGPLGYVMEWIYKLLPNYGWDIILFTLLINIVKIPLQTSQQKSMAKMSAFQPMIA 62 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE----- 452 E++ K+K P + Q+ +++L + P AGC P+LL V F + V+ LE Sbjct: 63 EIQTKYKNKPEKQ-QEELMKLQQDFGYKPTAGCVPMLLNFLVMFGVIGVVYNPLERIFHI 121 Query: 453 -------MRHAPFWGWIKDLAAADPTNI--------------FT---------------L 476 A I A TNI FT Sbjct: 122 SAAALASAGEALTAAGISFTAITRDTNIIAEVVAGNSGVLGCFTAQQIATITEFSQHMNF 181 Query: 477 FGILPFYLP--GFMHVGIWPIIMSLSMF----IQMKMSPPPADKGQAMILNWMPVVFVFA 530 FGI +P G + P++ ++MF I MK S + + MP++++F Sbjct: 182 FGIDLTRIPKLGLSLDIVLPLLSVITMFLSTHISMKASGQQMQGSMKLTMYMMPLMYLFF 241 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P +Y+ SN++ Q V+ K + E Sbjct: 242 CFTYPLAFSLYYVISNIVMTAQTQVMRKFYDPE 274 >gi|260558940|ref|ZP_05831127.1| inner membrane protein [Enterococcus faecium C68] gi|293559780|ref|ZP_06676300.1| membrane protein OxaA 2 [Enterococcus faecium E1162] gi|314950195|ref|ZP_07853480.1| putative OxaA-like protein [Enterococcus faecium TX0082] gi|260075048|gb|EEW63363.1| inner membrane protein [Enterococcus faecium C68] gi|291606263|gb|EFF35677.1| membrane protein OxaA 2 [Enterococcus faecium E1162] gi|313643505|gb|EFS08085.1| putative OxaA-like protein [Enterococcus faecium TX0082] Length = 316 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 108/226 (47%), Gaps = 32/226 (14%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + + PM ++Y N ++G A++ TV V+++ PL +KK + + M+ ++ Sbjct: 39 YRVLVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALK 98 Query: 394 PKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+++ ++K K + + Q A M Q+Y+ + ++ G C P+L+Q+P+F A+Y Sbjct: 99 PQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + +R + F+G DL + P+ + + + + L G++ +GI Sbjct: 159 RYTEGIRESSFYGI--DLGS--PSMVLVVIAGVAYLLQGYISTIGI-------------- 200 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K +L P + VF S PAG+ +YW V S +Q Sbjct: 201 --PEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQ 244 >gi|167957434|ref|ZP_02544508.1| putative inner membrane protein translocase component YidC [candidate division TM7 single-cell isolate TM7c] Length = 267 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 121/255 (47%), Gaps = 45/255 (17%) Query: 342 IAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + +P+F L+ Y++V G+FG+A+++ T+ ++++ +PL KQ M+ IQP++D + Sbjct: 8 VVQPIFNLLMALYSIVPGGDFGVAVIIFTILIRIIMWPLISKQLHQVKIMRKIQPELDRI 67 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +++ K + Q+ M+++YK +NI+P L+Q+P+FF +Y+VI I M Sbjct: 68 KKQAKGN-RQMQGMMMLEVYKKYNISPFRSIGLTLIQLPIFFGLYRVIQI-FTMHRGDLG 125 Query: 460 GWIKDLAA---------ADPTNIFT-LFGILPFYLPGFMHVGIWPIIMSLSM------FI 503 + +L A+P N LFG + + GI P++++L++ +I Sbjct: 126 KYTYNLLENIPAVSNLIANPNNFNNKLFGFVDLTVQAIGKSGISPLLLALAIGAGIMQYI 185 Query: 504 QMKMSPPPADKGQAM-------------------------ILNWMPVVFVFALSSFPAGL 538 K + P + + ++ +MP++ + + P + Sbjct: 186 SSKQTMPQKQTKKGLRQIMAEAAEGKEADSSEMNAAVMQKMVKFMPIMLTLIMVNLPGAI 245 Query: 539 IIYWSWSNVISIVQQ 553 +Y +++VQQ Sbjct: 246 ALYSCTFTAVAVVQQ 260 >gi|289579532|ref|YP_003478159.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter italicus Ab9] gi|289529245|gb|ADD03597.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter italicus Ab9] Length = 206 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 23/210 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + Y VGN+G AI++ T+ +++L P +Q + MK IQP I EL++K+ + P Sbjct: 11 LLEFIYKYVGNYGTAIIIFTILIRILLLPFYVQQMNTMKKMKEIQPLIQELQKKYAKD-P 69 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q L ++LY+ +NP GC P+LL + + + ++ ++ A F W+ LA Sbjct: 70 QKLNIETMKLYQEKKVNPFGGCLPMLLPLIILWPLFAMLRTYPAFSTASFL-WMHSLAER 128 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I PI+ +++ +I M DK Q + M + Sbjct: 129 DPYYII-------------------PILATVTTYISSAMV--ATDKSQNSMNIIMSIFIG 167 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 168 WITVSLPAGIGIYWVTSNIFQIVQQYIFMR 197 >gi|258541100|ref|YP_003175599.1| stage III sporulation protein J [Lactobacillus rhamnosus Lc 705] gi|257152776|emb|CAR91748.1| Stage III sporulation protein J [Lactobacillus rhamnosus Lc 705] Length = 278 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 21/202 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQSPPQV-LQKA 414 GN G+ I+ T+ +++L FPL+ S A + I P++ EL++K+ K + Q L+ Sbjct: 59 GNPGVGIIAFTLIIRILIFPLSYLSIKSMAKQQEIAPQLKELQKKYSSKDTETQTKLRDE 118 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY + +NP+ GC PI++Q+P A+Y+ I + ++ F W+ +L+ DP I Sbjct: 119 TQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSLQSGTFL-WM-NLSQPDPLWIM 176 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + L + + P S S ++ M +SP AMI FVF++ + Sbjct: 177 QILATLFTLGTSILSMMAQPTRNS-SSWVMMIISP-------AMI-------FVFSV-TL 220 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 P+ L IY +N S+VQQ +I Sbjct: 221 PSALAIYSVVTNAFSMVQQLLI 242 >gi|224283948|ref|ZP_03647270.1| 60 kDa inner membrane insertion protein [Bifidobacterium bifidum NCIMB 41171] Length = 336 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 47/264 (17%) Query: 331 EMLID---WGWFYFIAKPMFMLMSY-------FYNLVGN--FGIAIMLTTVFVKLL---- 374 E L+D WGW Y + P+ LM+ F L+G GI+ +L VF+ L+ Sbjct: 6 EFLLDRGIWGWLYKLLTPLEWLMTQVMVLFHKFLTLLGMAPIGISWVLAIVFLVLVVHAC 65 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPLAGC 430 P+ KQ S M+ +QPK+ ++ K+K Q+ + + + M++LY+ ++ NP+ C Sbjct: 66 ILPIYLKQMKSMRKMQALQPKMQHIQNKYKGKKDQASKEAMSREMMKLYQDNDANPMGSC 125 Query: 431 WPILLQIPVFFAIYKVIS----ISLEMRHA--PFWGWIKDLAAADPTNIFTLFGILPFYL 484 W ++Q PVF ++ ++S I+ R A F D A A +FG+ Sbjct: 126 WTAVIQGPVFMCMFYMLSAIPYIATGKRGALGAF-----DQATAKQFAQTRVFGVSVTDT 180 Query: 485 ------PGFMHVGIWPIIMSLSM----FIQMKMSPPPAD------KGQAMILNWMPVVFV 528 G + +G + ++M M F M+ + P A K Q + P++++ Sbjct: 181 FGTANNSGKVVIGFFILLMCACMWYMQFNNMRKNLPKASMQGSTYKMQQAMTWGFPIMYI 240 Query: 529 FALSSFPAGLIIYWSWSNVISIVQ 552 F+ FP +++YW +N ++ + Sbjct: 241 FSGIMFPFAVLVYWLTNNACNLAR 264 >gi|256848509|ref|ZP_05553951.1| cell division protein [Lactobacillus coleohominis 101-4-CHN] gi|256714776|gb|EEU29755.1| cell division protein [Lactobacillus coleohominis 101-4-CHN] Length = 277 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 106/223 (47%), Gaps = 23/223 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N G +G+ I++ T+ ++++ PL Q S M+ + P++ Sbjct: 37 WDHYIIYNCSRFIIWLSNHFGGYGMGIIIFTIIIRIIILPLMYYQTKSMMRMQELAPELK 96 Query: 398 ELREKFKQSPPQVLQKAMIQ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +L++K+ + +QK ++ LYK +NP A P+++Q+PV +A+Y+ I + +R Sbjct: 97 KLQKKYSSRDRETMQKLQVEQQKLYKEAGVNPFASMLPLIVQLPVMWALYQAIWRTSTLR 156 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 H F W++ L DP + +LP F + W + M+ P Sbjct: 157 HGTFL-WLQ-LGRPDP------YYVLPILAALFTFISSW-----------LSMASMPEKN 197 Query: 515 GQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + + W MP++ F F + + +YW +N +VQ ++ Sbjct: 198 SMSTAMTWFMPIMIFFMALGFSSAITLYWVVTNAFQVVQTLLL 240 >gi|290960105|ref|YP_003491287.1| membrane-protein-insertion protein [Streptomyces scabiei 87.22] gi|260649631|emb|CBG72746.1| putative membrane-protein-insertion protein [Streptomyces scabiei 87.22] Length = 279 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 14/112 (12%) Query: 350 MSYFYNLVGNFG-------------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 MS F +LVG+ AI+L T V+LL PL++ +QP+I Sbjct: 1 MSVFADLVGHLADLLQPLFHASATAFAIILFTALVRLLVHPLSRAAARGQRARVALQPQI 60 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 ELR+K ++P + LQKAM++L+ ++PL+GC P L Q+P FF +Y + S Sbjct: 61 AELRKKHAKNP-EKLQKAMMELHTKEKVSPLSGCLPSLCQLPAFFLLYHLFS 111 >gi|50913585|ref|YP_059557.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10394] gi|73921525|sp|Q5XDY9|OXAA1_STRP6 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|50902659|gb|AAT86374.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10394] Length = 275 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 101/201 (50%), Gaps = 27/201 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ EL++K+ Q K + Sbjct: 57 GSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTQTRMKLAEE 116 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK + +NP A P+L+Q+PV A+++ ++ ++ F W+ +LA D Sbjct: 117 SQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLKTGTFL-WV-ELAQHD----- 169 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWMPVVFVFAL 531 H+ + P++ ++ F+ ++ + M ++ MP++ F Sbjct: 170 --------------HLYLLPVLAAVFTFLSTWLTNLATKEKNVMMTVMIYVMPLMIFFMG 215 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 + +G+++YW+ SN +VQ Sbjct: 216 FNLASGVVLYWTVSNAFQVVQ 236 >gi|315223127|ref|ZP_07864995.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus anginosus F0211] gi|315187816|gb|EFU21563.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus anginosus F0211] Length = 305 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 30/226 (13%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 I +PM + + YF N +G FG+AI++ T+ V+L+ PL K + M ++P Sbjct: 39 IGRPMSLAIQYFANNMGLGFGVAIIIVTLIVRLIILPLGLYQSWKSTYQSEKMNYLKPIF 98 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++E+ K + Q Q+A++ K + +N L G C P+L+Q+P F A+Y + Sbjct: 99 EPIQERMKNAETQEEKLAAQQALMTAQKENGVNMLGGIGCLPLLIQLPFFSALYFSAQYT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + + F G A+ T + G+L F VGI + M M MSP Sbjct: 159 EGVAKSVFLGIPLGKASVLLT---VIVGVLYFIQSALTLVGIDEV-QKEQMKKMMYMSP- 213 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M V+F F + PAG+ +YW I I+QQ +I Sbjct: 214 -----------LMIVIFSF---TAPAGVTLYWVVGGFIMIIQQLII 245 >gi|313141100|ref|ZP_07803293.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] gi|313133610|gb|EFR51227.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] Length = 337 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 47/264 (17%) Query: 331 EMLID---WGWFYFIAKPMFMLMSY-------FYNLVGN--FGIAIMLTTVFVKLL---- 374 E L+D WGW Y + P+ LM+ F L+G GI+ +L VF+ L+ Sbjct: 7 EFLLDRGIWGWLYKLLTPLEWLMTQVMVLFHKFLTLLGMAPIGISWVLAIVFLVLVVHAC 66 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPLAGC 430 P+ KQ S M+ +QPK+ ++ K+K Q+ + + + M++LY+ ++ NP+ C Sbjct: 67 ILPIYLKQMKSMRKMQALQPKMQHIQNKYKGKKDQASKEAMSREMMKLYQDNDANPMGSC 126 Query: 431 WPILLQIPVFFAIYKVIS----ISLEMRHA--PFWGWIKDLAAADPTNIFTLFGILPFYL 484 W ++Q PVF ++ ++S I+ R A F D A A +FG+ Sbjct: 127 WTAVIQGPVFMCMFYMLSAIPYIATGKRGALGAF-----DQATAKQFAQTRVFGVSVTDT 181 Query: 485 ------PGFMHVGIWPIIMSLSM----FIQMKMSPPPAD------KGQAMILNWMPVVFV 528 G + +G + ++M M F M+ + P A K Q + P++++ Sbjct: 182 FGTANNSGKVVIGFFILLMCACMWYMQFNNMRKNLPKASMQGSTYKMQQAMTWGFPIMYI 241 Query: 529 FALSSFPAGLIIYWSWSNVISIVQ 552 F+ FP +++YW +N ++ + Sbjct: 242 FSGIMFPFAVLVYWLTNNACNLAR 265 >gi|327468457|gb|EGF13942.1| stage III sporulation protein J [Streptococcus sanguinis SK330] Length = 271 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 21/207 (10%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I L+EK+ Sbjct: 47 FLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESRT 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L + +LYK +NP A P+ +Q+PV A+++ ++ M+ F W+ +L A D Sbjct: 107 ALAEETQKLYKEMGVNPYASFIPLFIQMPVLLALFQALTRVDFMKTGHFL-WL-NLGATD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT I L L F + W +L P + G +++ +PV F Sbjct: 165 PTFILPLLAAL------FTFLSTWLSNKAL----------PERNGGMTVMMYLLPVAIFF 208 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 +G+ +YW+ SN +VQ ++ Sbjct: 209 FAFYAASGVALYWAVSNAYQVVQTLLL 235 >gi|291517735|emb|CBK71351.1| Preprotein translocase subunit YidC [Bifidobacterium longum subsp. longum F8] Length = 305 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 110/216 (50%), Gaps = 28/216 (12%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQ 417 +AI++ + V+ FPL KQ S M+ + PK+ ++ K+K Q ++AM ++ Sbjct: 22 LAIIILVLVVQACIFPLFYKQMKSMRKMQALAPKMQRIQNKYKGKTDQASREAMSRETMK 81 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMRHAPFWGWIKDLAAADPTNI 473 LY+ +++NP C P+L+Q PVF +++ +S I+ R A G D+A A Sbjct: 82 LYQDNDVNPAGSCLPMLIQGPVFMSMFYTLSAIPYIANGKRDA--LGAF-DVATAKQFTQ 138 Query: 474 FTLFGILPFY-------LPGFMHVGIWPIIMSLSM-FIQ---MKMSPPP------ADKGQ 516 +FGI+ G + +GI+ +M + F+Q MK + P A+ Q Sbjct: 139 TDVFGIVSVTDNFTRASTAGKVVIGIFVFLMCFCLWFMQYFNMKRNMPAASMNKQAETMQ 198 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +L PV+++F+ ++ P +++YW +NV ++ + Sbjct: 199 KAMLWLFPVMYIFSGATMPFAVLVYWLTNNVCNLCR 234 >gi|323490539|ref|ZP_08095745.1| membrane protein oxaA [Planococcus donghaensis MPA1U2] gi|323395805|gb|EGA88645.1| membrane protein oxaA [Planococcus donghaensis MPA1U2] Length = 260 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 111/228 (48%), Gaps = 32/228 (14%) Query: 337 GWFYFI-AKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK---- 390 G FY + KP + ++Y +L G ++G+AI++ T+ ++L+ P + Y MK Sbjct: 29 GMFYTVFVKPFDVSLNYLGDLFGGSYGLAIVVITIIIRLVLMPFMLRTYKRQQGMKVKMD 88 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 ++P++++++++ K++ + LQ+ M+ LYK H +NPL GC P+++Q+P+ +Y Sbjct: 89 AMRPEMEDIQKRLKETKDKEEQMKLQQEMMGLYKKHEVNPLNMGCLPVVIQMPIIMGLYF 148 Query: 446 VISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S +++ H W + P I TL ++ V +W + Sbjct: 149 AILHSPDVQAHEFLW-----FSLGSPDIIMTLIAGAVYFFQA--KVSLWTM--------- 192 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K + + P++ +F + A L +YW+ ++ I+Q Sbjct: 193 ----PEQQQKQMKLFIYISPIMIMFISFTSMAALPVYWTVGGILLIIQ 236 >gi|251781821|ref|YP_002996123.1| OxaA-like protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390450|dbj|BAH80909.1| OxaA-like protein precursor [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 307 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 32/227 (14%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQP 394 F+ KPM + YF N G +G+AI++ T+ V+ L PL K Y S M ++P Sbjct: 40 FLGKPMSYFIDYFANNAGLGYGLAIIIVTIVVRTLILPLGLYQSWKASYQSE-KMAFLKP 98 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVIS 448 + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 99 VFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQ 158 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F G DL + + + L F+ W LSM M +S Sbjct: 159 YTKGVSTSTFMGI--DLGSRSLV-LTAIIAALYFFQS-------W-----LSM---MAVS 200 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ +AM+ MP++ + S PAG+ +YW SI+QQ + Sbjct: 201 EEQREQMKAMMYT-MPIMMIVMSFSLPAGVGLYWLVGGFFSIIQQLI 246 >gi|302551683|ref|ZP_07304025.1| membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302469301|gb|EFL32394.1| membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 250 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 25/145 (17%) Query: 350 MSYFYNLVGN--------FGIA-----IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 MS F NLV FG + I+L T V+LL PL++ +QPKI Sbjct: 15 MSVFANLVEQLADLLQPLFGASAAAAAIVLFTALVRLLVHPLSRAAARGQKARTALQPKI 74 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-------- 448 ELR+K ++P + LQ+A+++L+ ++PLAGC P LLQ+P FF +Y + S Sbjct: 75 AELRKKHGKNP-EKLQRAVLELHAEEKVSPLAGCLPGLLQVPAFFLLYHLFSSDTIGGET 133 Query: 449 ---ISLEMRHAPFWGWIKDLAAADP 470 + ++ AP G D A P Sbjct: 134 NELLGHQLLAAPLGGRWADALQAGP 158 >gi|196003362|ref|XP_002111548.1| hypothetical protein TRIADDRAFT_23561 [Trichoplax adhaerens] gi|190585447|gb|EDV25515.1| hypothetical protein TRIADDRAFT_23561 [Trichoplax adhaerens] Length = 305 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 38/213 (17%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQL 418 +IM+ T ++ L PL + Y ++A M NI P + L K + +P Q + + + L Sbjct: 59 SIMVATAILRALTLPLVVRSYRNSARMNNISPTVSRLMNKMRAAPTQQEAALYSQELRLL 118 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIY----KVISISLEMRHAPFWGWIKDLAAADPTNIF 474 ++ HN NP LLQ+PVF + + ++ + LE W DL AAD Sbjct: 119 FQKHNCNPFKSLISPLLQVPVFISFFLGLRRMCTAPLESMKDGGMYWFTDLTAAD----- 173 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVF- 529 P+Y + P++ ++M + +++ + M + M +VF F Sbjct: 174 ------PYY--------VLPVLSCVTMLLTLELGTEVGARNSGMQQQATMKVMKIVFRFL 219 Query: 530 ------ALSSFPAGLIIYWSWSNVISIVQQAVI 556 + FP + YW SN S++Q ++ Sbjct: 220 AIGMLPVTAQFPTAIFCYWLTSNSCSMLQMVIL 252 >gi|257883078|ref|ZP_05662731.1| inner membrane protein [Enterococcus faecium 1,231,502] gi|257818736|gb|EEV46064.1| inner membrane protein [Enterococcus faecium 1,231,502] Length = 316 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 111/235 (47%), Gaps = 35/235 (14%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + + PM ++Y N ++G A++ TV V+++ PL +KK + + M+ ++ Sbjct: 39 YRVLVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALK 98 Query: 394 PKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+++ ++K K + + Q A M Q+Y+ + ++ G C P+L+Q+P+F A+Y Sbjct: 99 PQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + +R + F+G DL + P+ + + + L G++ +GI Sbjct: 159 RYTEGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGI-------------- 200 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ---QAVIMK 558 P K +L P + VF S PAG+ +YW V S +Q VIMK Sbjct: 201 --PEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVIMK 253 >gi|326779124|ref|ZP_08238389.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf. griseus XylebKG-1] gi|326659457|gb|EGE44303.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf. griseus XylebKG-1] Length = 256 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 51/225 (22%) Query: 346 MFMLMSYFYNLVGNFG-------------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 M MS F +LVG+ AI+L T V+L PL++ + Sbjct: 1 MSAFMSAFASLVGSLADLLQPFFQTASTAAAIVLFTALVRLAVHPLSRAAARGQKARSRL 60 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---- 448 QP+I ELR+K ++P + +QKA+++L+ ++PL+GC P LLQ+P FF +Y + S Sbjct: 61 QPQIAELRKKHGKNP-ERMQKAIMELHAAEKVSPLSGCLPSLLQMPAFFLLYHLFSSGSI 119 Query: 449 -------ISLEMRHAPFWG-WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +S ++ AP G W L +FG G++++G++ I+ +++ Sbjct: 120 GGEPNALLSHDLLGAPLGGRWHDALGNGG------MFGA-----QGWVYLGLFAIVTAVA 168 Query: 501 MFIQMK---------MSPPPADKGQAM-----ILNWMPVVFVFAL 531 F + M+P GQA+ + MP++ F L Sbjct: 169 TFNYGRTKRQLAANPMTPAAGPDGQAVPGMGAMAKVMPLMSFFTL 213 >gi|108712059|gb|ABF99854.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza sativa Japonica Group] Length = 372 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 24/191 (12%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAA 467 + +Q +LYK +++PLAGC P L+ IPV+ +Y+ +S ++ E + WI LA Sbjct: 37 ERIQLETARLYKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAG 96 Query: 468 ADPTNIFT---------LF----GILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPP--- 510 PT I LF G P + + P+++ +S ++ + M PP Sbjct: 97 --PTTIAARQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNN 154 Query: 511 -PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL--- 566 P+ +G ++ ++P++ + S P+GL +YW +N++S QQ + K+ GA+ + Sbjct: 155 DPSQQGAQAVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEY 214 Query: 567 IDRLRSTFSKN 577 ID+L S N Sbjct: 215 IDKLAKEESTN 225 >gi|294623037|ref|ZP_06701926.1| membrane protein OxaA 2 [Enterococcus faecium U0317] gi|291597593|gb|EFF28755.1| membrane protein OxaA 2 [Enterococcus faecium U0317] Length = 316 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 32/226 (14%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + + PM ++Y N ++G A++ TV V+++ PL +KK + + M+ ++ Sbjct: 39 YRVLVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALK 98 Query: 394 PKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+++ ++K K + + Q A M Q+Y+ + ++ G C P+L+Q+P+F A+Y Sbjct: 99 PQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + +R + F+G DL + P+ + + + L G++ +GI Sbjct: 159 RYTEGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGI-------------- 200 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K +L P + VF S PAG+ +YW V S +Q Sbjct: 201 --PEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQ 244 >gi|228478121|ref|ZP_04062732.1| preprotein translocase subunit YidC [Streptococcus salivarius SK126] gi|228250301|gb|EEK09554.1| preprotein translocase subunit YidC [Streptococcus salivarius SK126] Length = 284 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 25/189 (13%) Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINP 426 T+ ++ + PL +Q S+ ++ +QP++ L+ ++ + + L A LYK H +NP Sbjct: 78 TILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYAQQDLYKEHGVNP 137 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 A P+L+Q P+ A+Y ++ E+R F W+ DL DP + ILP Sbjct: 138 YASFVPLLIQFPILMALYGALTRVPELREGTFL-WV-DLGQKDP------YFILPILAAA 189 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL--NWMPVVFVFALSS-FPAGLIIYWS 543 F + W ++ A AM+L N M +F+F + +G+ +YW+ Sbjct: 190 FTFLSTW-------------LTNKAAKDRSAMLLVMNIMLPIFIFWFGTQISSGVALYWA 236 Query: 544 WSNVISIVQ 552 SN +VQ Sbjct: 237 VSNAFQVVQ 245 >gi|182438478|ref|YP_001826197.1| hypothetical protein SGR_4685 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466994|dbj|BAG21514.1| putative membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 256 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 51/225 (22%) Query: 346 MFMLMSYFYNLVGNFG-------------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 M MS F +LVG+ AI+L T V+L PL++ + Sbjct: 1 MSAFMSAFASLVGSLADLLQPFFQTASTAAAIVLFTALVRLAVHPLSRAAARGQKARSRL 60 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---- 448 QP+I ELR+K ++P + +QKA+++L+ ++PL+GC P LLQ+P FF +Y + S Sbjct: 61 QPQIAELRKKHGKNP-EKMQKAIMELHAAEKVSPLSGCLPSLLQMPAFFLLYHLFSSGSI 119 Query: 449 -------ISLEMRHAPFWG-WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +S ++ AP G W L +FG G++++G++ I+ +++ Sbjct: 120 GGEPNALLSHDLLGAPLGGRWHDALGNGG------MFGA-----QGWVYLGLFAIVTAVA 168 Query: 501 MFIQMK---------MSPPPADKGQAM-----ILNWMPVVFVFAL 531 F + M+P GQA+ + MP++ F L Sbjct: 169 TFNYGRTKRQLAANPMTPAAGPDGQAVPGMGAMAKVMPLMSFFTL 213 >gi|306826338|ref|ZP_07459671.1| ParB/SpoJ family partitioning protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431451|gb|EFM34434.1| ParB/SpoJ family partitioning protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 277 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 23/198 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I LRE++ L + M Sbjct: 59 SIGVGIILFTILIRTILLPVFQTQMVASRKMQEAQPRIKALREQYPGRDMESRTKLDQEM 118 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++YK I + WPIL+Q+PV A+++ +S ++ F WI +L D + Sbjct: 119 RKVYKELGIKHSSSLWPILIQMPVLLALFQALSRVDFLKTGHFL-WI-NLGGVDTSF--- 173 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFVFALSSF 534 +LP F + W +LS A G ++ MP+ +FVFA+S+ Sbjct: 174 ---VLPILAAVFTFLSSWLSNKALS-------EKSGATTG---MMYGMPILIFVFAISA- 219 Query: 535 PAGLIIYWSWSNVISIVQ 552 P+G+ +YW+ SN ++Q Sbjct: 220 PSGVALYWAVSNAYQVLQ 237 >gi|160902082|ref|YP_001567663.1| 60 kDa inner membrane insertion protein [Petrotoga mobilis SJ95] gi|160359726|gb|ABX31340.1| 60 kDa inner membrane insertion protein [Petrotoga mobilis SJ95] Length = 465 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 20/212 (9%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + + GNFG AI+L T+ V + FP+ +Q S MK +QP+++++R+K+K PQ Sbjct: 257 WLFKVTGNFGWAIILFTLIVNAILFPVYGRQKKSMIEMKQLQPELEKIRKKYKN--PQKQ 314 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ ++LYK +NP GC L+ +P+ +++VI + + A +P Sbjct: 315 QEETLKLYKEKGVNPAGGCLTSLIPLPIMIILWQVIY------------YFEGSYAYNPR 362 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 F L+ L L GF ++ ++ I + A ++ M VVF F L Sbjct: 363 --FLLWTDLS--LGGFQANFFLLLLAIIASLINALLMSQDARSAWTSVI--MSVVFPFIL 416 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P G+ IY+S + VI + V +++ + Sbjct: 417 IGLPVGVFIYYSLNTVIQTLLTFVYNRIYNVK 448 >gi|308068957|ref|YP_003870562.1| membrane protein oxaA 2 precursor [Paenibacillus polymyxa E681] gi|305858236|gb|ADM70024.1| Membrane protein oxaA 2 precursor [Paenibacillus polymyxa E681] Length = 277 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 34/207 (16%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----IQPKIDELREKFKQ----SPPQ 409 G+FG+AIM T V+L PL +Q + MK +QP +D +++K++ + Q Sbjct: 68 GSFGLAIMTLTFIVRLALLPLMMRQTRAQQGMKRKMSVMQPDLDRIKKKYENKKDTTSQQ 127 Query: 410 VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEM-RHAPFWGWIKDLAA 467 +Q+ M+ LYK H NPL GC PIL+Q+P+ +Y I ++ E+ H+ W Sbjct: 128 SMQQEMMSLYKEHQFNPLNIGCLPILIQLPILSGMYTAIRLTPELASHSFLW-----FRL 182 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVV 526 P I + + + ++ + Q++M+P + Q I+ ++ P++ Sbjct: 183 GQPDWILAIV--------------VAVVYLAQAKLSQLQMTPD--QRKQFAIMGYLSPIM 226 Query: 527 F-VFALSSFPAGLIIYWSWSNVISIVQ 552 VF+ ++ PA + +YW+ S ++Q Sbjct: 227 MAVFSFNA-PAAMPLYWTVSGTFLLLQ 252 >gi|318057143|ref|ZP_07975866.1| hypothetical protein SSA3_04345 [Streptomyces sp. SA3_actG] gi|318080025|ref|ZP_07987357.1| hypothetical protein SSA3_25903 [Streptomyces sp. SA3_actF] Length = 281 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 1/87 (1%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T V+LL PL++ + P+I LR K+ ++P + +Q+A+ +L+ H Sbjct: 41 IVVLTACVRLLLLPLSRTAARGQRERAGLAPEIAALRRKYAKNP-ERMQRALTELHAEHG 99 Query: 424 INPLAGCWPILLQIPVFFAIYKVISIS 450 ++PL GC P+L Q+P FF +Y V S S Sbjct: 100 VSPLGGCLPMLCQLPFFFVLYHVFSSS 126 >gi|158336230|ref|YP_001517404.1| putative inner membrane protein translocase component YidC [Acaryochloris marina MBIC11017] gi|158306471|gb|ABW28088.1| inner membrane protein OxaA, putative [Acaryochloris marina MBIC11017] Length = 404 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 71/117 (60%), Gaps = 12/117 (10%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP----KIDELRE 401 M ++ +FY +V ++G+AI+ T+ ++ + +P++ Q + MK QP + EL+E Sbjct: 12 MLPILDFFYGIVPSYGLAIVALTLVIRSVLYPVSAGQIRNMRRMKVSQPVMQKRQKELQE 71 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++K P + LQ+ +L+K NPLAGC+P+L+Q+P+ FA++ +R +PF Sbjct: 72 RYKDDPAK-LQEEQTKLFKEFG-NPLAGCFPLLIQMPILFALFAT------LRGSPF 120 >gi|317126737|ref|YP_004100849.1| membrane protein insertase, YidC/Oxa1 family [Intrasporangium calvum DSM 43043] gi|315590825|gb|ADU50122.1| membrane protein insertase, YidC/Oxa1 family [Intrasporangium calvum DSM 43043] Length = 373 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 118/241 (48%), Gaps = 37/241 (15%) Query: 352 YFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 + ++L+G + ++I+ TV V++L PL +Q S+ M+ IQP++ ++++K+K Sbjct: 25 WLFDLIGLPTGWAWALSIVGLTVVVRVLLIPLFVRQIHSSRKMQLIQPEMQKIQKKYKGK 84 Query: 407 PPQVLQKA----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--------------- 447 QKA ++ LY+ NP + C PILLQ P FFA+++++ Sbjct: 85 RDPESQKAQQAEIMDLYRRTGTNPFSSCLPILLQSPFFFALFQLLNNLKSIAEGNIKGGG 144 Query: 448 --------SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +++L + + +G L+ A T+ T IL L M V + L Sbjct: 145 SPVGPITKAVALSIEDSRIFG--SRLSDAFLTSPGTSTKILAAVLIAAMSVTTFTTQHQL 202 Query: 500 SMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M M S P K Q ++L MP+ F + +FP G++IYW+ +N+ ++ QQ ++ Sbjct: 203 -MRKNMPASALDNPFAKQQKVLLYLMPIFFAISGVNFPVGVLIYWTTTNLWTMGQQFYVI 261 Query: 558 K 558 + Sbjct: 262 R 262 >gi|257884106|ref|ZP_05663759.1| inner membrane protein [Enterococcus faecium 1,231,501] gi|257819944|gb|EEV47092.1| inner membrane protein [Enterococcus faecium 1,231,501] Length = 316 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 32/226 (14%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + + PM ++Y N ++G A++ TV V+++ PL +KK + + M+ ++ Sbjct: 39 YRVLVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALK 98 Query: 394 PKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+++ ++K K + + Q A M Q+Y+ + ++ G C P+L+Q+P+F A+Y Sbjct: 99 PQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + +R + F+G DL + P+ + + + L G++ +GI Sbjct: 159 RYTEGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGI-------------- 200 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K +L P + VF S PAG+ +YW V S +Q Sbjct: 201 --PEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQ 244 >gi|294616351|ref|ZP_06696144.1| membrane protein OxaA 2 [Enterococcus faecium E1636] gi|291590865|gb|EFF22581.1| membrane protein OxaA 2 [Enterococcus faecium E1636] Length = 316 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 32/226 (14%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + + PM ++Y N ++G A++ TV V+++ PL +KK + + M+ ++ Sbjct: 39 YRVLVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALK 98 Query: 394 PKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+++ ++K K + + Q A M Q+Y+ + ++ G C P+L+Q+P+F A+Y Sbjct: 99 PQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + +R + F+G DL + P+ + + + L G++ +GI Sbjct: 159 RYTEGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGI-------------- 200 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K +L P + VF S PAG+ +YW V S +Q Sbjct: 201 --PEEQKKTMRTMLIVSPALIVFMSISAPAGVTLYWVVGGVFSCLQ 244 >gi|291484826|dbj|BAI85901.1| OxaA-like protein precursor [Bacillus subtilis subsp. natto BEST195] Length = 275 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 22/239 (9%) Query: 333 LIDWGWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLA----KKQYVST 386 L + G+F+ ++ +P L+ L G +G++I+L T+ V+++ PL KKQ + Sbjct: 34 LSNVGFFHDYLIEPFSALLKGVAGLFHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRIFQ 93 Query: 387 ANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFF 441 M I+P++D ++ K K++ + LQ M++LY+ +NINPLA GC P+L+Q P+ Sbjct: 94 EKMAVIKPQVDSIQVKLKKTKDPEKQKELQMEMMKLYQENNINPLAMGCLPMLIQSPIMI 153 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y I + E+ F W L +D IL G M+ I LS Sbjct: 154 GLYYAIRSTPEIASHSFL-WF-SLGQSD---------ILMSLSAGIMYFVQAYIAQKLSA 202 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P A + +++ PV+ + PA L +YW S + VQ V+ H Sbjct: 203 KYSAVPQNPAAQQSAKLMVFIFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNIVLQMTH 261 >gi|213865391|ref|ZP_03387510.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 110 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 20/110 (18%) Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+E+RHAPF WI DL+A DP I PI+M ++MF KMSP Sbjct: 5 SIELRHAPFALWIHDLSAQDPYYIL-------------------PILMGVTMFFIQKMSP 45 Query: 510 PPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 46 TTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 95 >gi|255023194|ref|ZP_05295180.1| OxaA-like protein precursor [Listeria monocytogenes FSL J1-208] Length = 191 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 77/135 (57%), Gaps = 12/135 (8%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G+F ++ +P + + + VG N+G+AI++TT+ ++ L PL AK Q + M Sbjct: 32 GFFSTYLVQPFTSFIMFVASFVGDNYGVAIIITTLLIRALIMPLNLRTAKAQMGMQSKMA 91 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYK 445 +P+IDE++ + K++ + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y Sbjct: 92 VAKPEIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYY 151 Query: 446 VISISLEM-RHAPFW 459 I S E+ H W Sbjct: 152 AIRGSSEIASHTFLW 166 >gi|307265440|ref|ZP_07546996.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter wiegelii Rt8.B1] gi|306919554|gb|EFN49772.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter wiegelii Rt8.B1] Length = 206 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + L+ + ++ VGN+GIAI++ T+ +++L P +Q + MK IQP I+EL++ Sbjct: 4 IAMYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMSTMKKMKEIQPLIEELQK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + PQ L ++LY+ +NP GC P+LL + + + ++ ++ A F W Sbjct: 64 KYAKD-PQKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTASFL-W 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + LA DP I PI+ +++ +I M DK Q + Sbjct: 122 MHSLAQKDPYYII-------------------PILATVTTYISSAMV--ATDKSQNSMNI 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 161 MMSIFMGWVTVSLPAGVGIYWVTSNIFQIVQQYIFMR 197 >gi|293553834|ref|ZP_06674449.1| membrane protein OxaA 2 [Enterococcus faecium E1039] gi|294620202|ref|ZP_06699536.1| membrane protein OxaA 2 [Enterococcus faecium E1679] gi|314940176|ref|ZP_07847354.1| putative OxaA-like protein [Enterococcus faecium TX0133a04] gi|314942407|ref|ZP_07849250.1| putative OxaA-like protein [Enterococcus faecium TX0133C] gi|314952317|ref|ZP_07855328.1| putative OxaA-like protein [Enterococcus faecium TX0133A] gi|314994240|ref|ZP_07859543.1| putative OxaA-like protein [Enterococcus faecium TX0133B] gi|314997155|ref|ZP_07862141.1| putative OxaA-like protein [Enterococcus faecium TX0133a01] gi|291593555|gb|EFF25095.1| membrane protein OxaA 2 [Enterococcus faecium E1679] gi|291602040|gb|EFF32277.1| membrane protein OxaA 2 [Enterococcus faecium E1039] gi|313588729|gb|EFR67574.1| putative OxaA-like protein [Enterococcus faecium TX0133a01] gi|313591327|gb|EFR70172.1| putative OxaA-like protein [Enterococcus faecium TX0133B] gi|313595576|gb|EFR74421.1| putative OxaA-like protein [Enterococcus faecium TX0133A] gi|313598807|gb|EFR77652.1| putative OxaA-like protein [Enterococcus faecium TX0133C] gi|313640615|gb|EFS05195.1| putative OxaA-like protein [Enterococcus faecium TX0133a04] Length = 316 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 32/226 (14%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + + PM ++Y N ++G A++ TV V+++ PL +KK + + M+ ++ Sbjct: 39 YRVLVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALK 98 Query: 394 PKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+++ ++K K + + Q A M Q+Y+ + ++ G C P+L+Q+P+F A+Y Sbjct: 99 PQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + +R + F+G DL + P+ + + + L G++ +GI Sbjct: 159 RYTEGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGI-------------- 200 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K +L P + VF S PAG+ +YW V S +Q Sbjct: 201 --PEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQ 244 >gi|257886890|ref|ZP_05666543.1| inner membrane protein [Enterococcus faecium 1,141,733] gi|293568628|ref|ZP_06679943.1| membrane protein OxaA 2 [Enterococcus faecium E1071] gi|293571649|ref|ZP_06682670.1| membrane protein OxaA 2 [Enterococcus faecium E980] gi|257822944|gb|EEV49876.1| inner membrane protein [Enterococcus faecium 1,141,733] gi|291588588|gb|EFF20421.1| membrane protein OxaA 2 [Enterococcus faecium E1071] gi|291608319|gb|EFF37620.1| membrane protein OxaA 2 [Enterococcus faecium E980] Length = 316 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 32/226 (14%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + + PM ++Y N ++G A++ TV V+++ PL +KK + + M+ ++ Sbjct: 39 YRVLVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALK 98 Query: 394 PKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+++ ++K K + + Q A M Q+Y+ + ++ G C P+L+Q+P+F A+Y Sbjct: 99 PQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + +R + F+G DL + P+ + + + L G++ +GI Sbjct: 159 RYTEGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGI-------------- 200 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K +L P + VF S PAG+ +YW V S +Q Sbjct: 201 --PEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQ 244 >gi|257893080|ref|ZP_05672733.1| inner membrane protein [Enterococcus faecium 1,231,408] gi|257829459|gb|EEV56066.1| inner membrane protein [Enterococcus faecium 1,231,408] Length = 316 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 32/226 (14%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + + PM ++Y N ++G A++ TV V+++ PL +KK + + M+ ++ Sbjct: 39 YRVLVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALK 98 Query: 394 PKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+++ ++K K + + Q A M Q+Y+ + ++ G C P+L+Q+P+F A+Y Sbjct: 99 PQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + +R + F+G DL + P+ + + + L G++ +GI Sbjct: 159 RYTEGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGI-------------- 200 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K +L P + VF S PAG+ +YW V S +Q Sbjct: 201 --PEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQ 244 >gi|322374156|ref|ZP_08048690.1| SpoIIIJ family protein [Streptococcus sp. C150] gi|321277122|gb|EFX54193.1| SpoIIIJ family protein [Streptococcus sp. C150] Length = 268 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 25/189 (13%) Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP-PQVLQKAMIQLYKTHNINP 426 T+ ++ + PL +Q S+ ++ +QP++ L+ ++ S + L A +LYK H +NP Sbjct: 62 TILIRAVMIPLYNRQIKSSRELQELQPELRRLQGEYPGSENREALANAQQELYKEHGVNP 121 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 A P+L+Q P+ A+Y ++ E+R F W+ DL DP + ILP Sbjct: 122 YASFVPLLIQFPILMALYGALTRVPELREGTFL-WV-DLGQKDP------YFILPILAAA 173 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL--NWMPVVFVFALSS-FPAGLIIYWS 543 F + W ++ A + +M+L N + VF+F + +G+ +YW+ Sbjct: 174 FTFLSTW-------------LTNKAAKERSSMLLVMNILLPVFIFWFGTQISSGVALYWA 220 Query: 544 WSNVISIVQ 552 SN +VQ Sbjct: 221 VSNAFQVVQ 229 >gi|227551947|ref|ZP_03981996.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecium TX1330] gi|257895460|ref|ZP_05675113.1| inner membrane protein [Enterococcus faecium Com12] gi|293378327|ref|ZP_06624496.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecium PC4.1] gi|227178852|gb|EEI59824.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecium TX1330] gi|257832025|gb|EEV58446.1| inner membrane protein [Enterococcus faecium Com12] gi|292643191|gb|EFF61332.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecium PC4.1] Length = 316 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 32/226 (14%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + + PM ++Y N ++G A++ TV V+++ PL +KK + + M+ ++ Sbjct: 39 YRVLVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALK 98 Query: 394 PKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+++ ++K K + + Q A M Q+Y+ + ++ G C P+L+Q+P+F A+Y Sbjct: 99 PQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + +R + F+G DL + P+ + + + L G++ +GI Sbjct: 159 RYTEGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGI-------------- 200 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K +L P + VF S PAG+ +YW V S +Q Sbjct: 201 --PEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQ 244 >gi|194466629|ref|ZP_03072616.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri 100-23] gi|194453665|gb|EDX42562.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri 100-23] Length = 316 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 35/235 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 +G+ Y ++AKPM LM + + +GN +G AI++ V V+ + P+ KK + M Sbjct: 32 YGFVYDYMAKPMQHLMEWLASHMGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKM 91 Query: 390 KNIQPKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +QP I EL EK K ++P + + + M+ LY+ +NI+ G C P+L+Q+P+F A+ Sbjct: 92 SKVQPLIKELTEKQKAAKTPEEQAAVSQQMMALYRDNNISLTGGIGCLPLLIQLPIFAAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMF 502 Y I S ++ HA F+G + P+ I + + + ++ VG+ Sbjct: 152 YAAIRYSPDLYHATFFG----IPLGKPSIILAVLSFIAYAAQSYLGLVGV---------- 197 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAVI 556 P A K Q WM F +S + AGL +Y+ + +I+Q ++ Sbjct: 198 -------PEAQKKQMKAAIWMSPFMTFFISITSSAGLGLYFFIGGLFAILQTLMV 245 >gi|227543950|ref|ZP_03973999.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus reuteri CF48-3A] gi|300909700|ref|ZP_07127161.1| membrane protein OxaA 2 [Lactobacillus reuteri SD2112] gi|68160786|gb|AAY86839.1| lr0974 [Lactobacillus reuteri] gi|227186066|gb|EEI66137.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus reuteri CF48-3A] gi|300893565|gb|EFK86924.1| membrane protein OxaA 2 [Lactobacillus reuteri SD2112] Length = 316 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 35/235 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 +G+ Y ++AKPM LM + + +GN +G AI++ V V+ + P+ KK + M Sbjct: 32 YGFVYDYMAKPMQHLMEWLASHMGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKM 91 Query: 390 KNIQPKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +QP I EL EK K ++P + + + M+ LY+ +NI+ G C P+L+Q+P+F A+ Sbjct: 92 SKVQPLIKELTEKQKAAKTPEEQAAVSQQMMALYRDNNISLTGGIGCLPLLIQLPIFAAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMF 502 Y I S ++ HA F+G + P+ I + + + ++ VG+ Sbjct: 152 YAAIRYSPDLYHATFFG----IPLGKPSIILAVLSFIAYAAQSYLGLVGV---------- 197 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAVI 556 P A K Q WM F +S + AGL +Y+ + +I+Q ++ Sbjct: 198 -------PEAQKKQMKAAIWMSPFMTFFISITSSAGLGLYFFIGGLFAILQTLMV 245 >gi|260905353|ref|ZP_05913675.1| preprotein translocase YidC subunit [Brevibacterium linens BL2] Length = 270 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 56/86 (65%), Gaps = 1/86 (1%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 +AI++ T+ V+ + P+ Q + K + PKI EL+ ++K++P +++Q+ M++LYK Sbjct: 37 ALAIVVLTIIVRAVLIPVGLSQVRAGITRKRLAPKITELQTRYKKTP-ELMQQKMMELYK 95 Query: 421 THNINPLAGCWPILLQIPVFFAIYKV 446 +P+AGC P+L Q+PV A+Y + Sbjct: 96 EEKASPMAGCLPVLAQMPVLMAVYGI 121 >gi|257879967|ref|ZP_05659620.1| inner membrane protein [Enterococcus faecium 1,230,933] gi|257814195|gb|EEV42953.1| inner membrane protein [Enterococcus faecium 1,230,933] Length = 309 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 32/226 (14%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + + PM ++Y N ++G A++ TV V+++ PL +KK + + M+ ++ Sbjct: 39 YRVLVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALK 98 Query: 394 PKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+++ ++K K + + Q A M Q+Y+ + ++ G C P+L+Q+P+F A+Y Sbjct: 99 PQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + +R + F+G DL + P+ + + + L G++ +GI Sbjct: 159 RYTEGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGI-------------- 200 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K +L P + VF S PAG+ +YW V S +Q Sbjct: 201 --PEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQ 244 >gi|306830233|ref|ZP_07463416.1| ParB/SpoJ family partitioning protein [Streptococcus mitis ATCC 6249] gi|304427600|gb|EFM30697.1| ParB/SpoJ family partitioning protein [Streptococcus mitis ATCC 6249] Length = 277 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 96/197 (48%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I L+E++ L + M Sbjct: 59 SIGVGIILFTILIRTILLPVFQTQIVASRKMQEAQPRIKALQEQYPGRDMESRTKLDQEM 118 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++YK + + WPIL+Q+PV A+++ +S +E + W+ +L D + Sbjct: 119 RKVYKELGVKHSSSIWPILIQMPVLLALFQALS-RVEFLKTGHFLWV-NLGGVDTSF--- 173 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 ILP F + W + K P + M+ ++F+FA+S+ P Sbjct: 174 ---ILPILAAVFTFLSSW---------LSNKALPERSGAMTGMMYGMPVLIFIFAISA-P 220 Query: 536 AGLIIYWSWSNVISIVQ 552 +G+ +YW+ SN ++Q Sbjct: 221 SGVALYWAVSNAYQVLQ 237 >gi|69247382|ref|ZP_00604326.1| 60 kDa inner membrane protein [Enterococcus faecium DO] gi|68194854|gb|EAN09327.1| 60 kDa inner membrane protein [Enterococcus faecium DO] Length = 308 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 32/226 (14%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + + PM ++Y N ++G A++ TV V+++ PL +KK + + M+ ++ Sbjct: 38 YRVLVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALK 97 Query: 394 PKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+++ ++K K + + Q A M Q+Y+ + ++ G C P+L+Q+P+F A+Y Sbjct: 98 PQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTA 157 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + +R + F+G DL + P+ + + + L G++ +GI Sbjct: 158 RYTEGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGI-------------- 199 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K +L P + VF S PAG+ +YW V S +Q Sbjct: 200 --PEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQ 243 >gi|322391229|ref|ZP_08064701.1| stage III sporulation protein J [Streptococcus peroris ATCC 700780] gi|321145982|gb|EFX41371.1| stage III sporulation protein J [Streptococcus peroris ATCC 700780] Length = 271 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 27/200 (13%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ + P+ + Q V++ M+ QP+I ELRE++ L + Sbjct: 53 SIGLGIILFTVLIRTILLPVFQTQMVASRKMQEAQPRIKELRERYPGRDMESRTKLDQET 112 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +L+K I A WP+L+Q+P+ A+++ +S +++ + W +L AD T + Sbjct: 113 RKLFKELGIKQSATFWPLLIQMPILLALFQALS-NVDFLKTGHFLWF-NLGGADTTFVL- 169 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMILNWMPVVFVFALS 532 PI+ +L F +S P + ++ MPV+ F Sbjct: 170 ------------------PILAALFTFFSSWLSNKALPEKNAAMTGMMYGMPVIIFFFAI 211 Query: 533 SFPAGLIIYWSWSNVISIVQ 552 S P+G+ +YW+ SN ++Q Sbjct: 212 SAPSGVALYWAVSNAYQVLQ 231 >gi|323126634|gb|ADX23931.1| OxaA-like protein precursor [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 307 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 32/227 (14%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQP 394 F+ KPM + YF N G +G+AI++ T+ V+ L PL K Y S M ++P Sbjct: 40 FLGKPMSYFIDYFANNAGLGYGLAIIIVTIVVRTLILPLGLYQSWKASYQSE-KMAFLKP 98 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVIS 448 + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 99 VFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQ 158 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F G DL + + + L F+ W LSM M +S Sbjct: 159 YTKGVSISTFMGI--DLGSRSLV-LTAIIAALYFFQS-------W-----LSM---MAVS 200 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ +AM+ MP++ + S PAG+ +YW SI+QQ + Sbjct: 201 EEQREQMKAMMYT-MPIMMIVMSFSLPAGVGLYWLVGGFFSIIQQLI 246 >gi|299143467|ref|ZP_07036547.1| stage III sporulation protein J [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517952|gb|EFI41691.1| stage III sporulation protein J [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 232 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%) Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 KLL P+ + M +QP+I++L++K+ Q+ P+ L QLYK N N L+GC Sbjct: 36 KLLVVPINISMIKNQKKMAELQPEIEKLKKKY-QNDPKTLAVKQQQLYKEANYNMLSGCL 94 Query: 432 PILLQIPVFFAIYKVI----------SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 P++LQ V A Y+V + F+ +I +L DPT I + + Sbjct: 95 PMILQFVVLIAFYRVFWEPAKYAFTDKAMFDAMSKNFF-YIANLQEKDPTMILGIIAAIT 153 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 +L F +S Q M ++ ++ MP++ F +GL++Y Sbjct: 154 TFLTSF---------VSNQNPAQKTMQNKQSNSMMTSMMIVMPIMIFTMARKFQSGLVLY 204 Query: 542 WSWSNVISIVQQAVIMKMHGAEIG 565 W+ SNV +IVQQ + ++ + Sbjct: 205 WTVSNVFAIVQQLITNRIIAGSVA 228 >gi|296875720|ref|ZP_06899785.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis ATCC 15912] gi|296433290|gb|EFH19072.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis ATCC 15912] Length = 279 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 33/224 (14%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF A+ + F + GN G+ I++ T+ ++ + PL + Q ST M+ IQ Sbjct: 41 GWERFVYFFAEAI-----RFLSFGGNIGVGIIVFTIVIRTVLLPLFQYQMNSTRKMQEIQ 95 Query: 394 PKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + EL+ K+ L + M LYK + + P+L+Q+PV A+++ +S Sbjct: 96 PLLKELQAKYPGKDLDSRTKLSEEMRALYKEKGVKTSSAFLPLLIQMPVLMALFQALS-R 154 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E + W+ DL A DPT ILP F W + Sbjct: 155 VEFLKVGHFLWL-DLGAIDPTY------ILPVLAALFTFFSSW-----------LTNKAM 196 Query: 511 PADKGQAMILNW-MPV-VFVFALSSFPAGLIIYWSWSNVISIVQ 552 P G A + + MPV +F FAL S +G+ +YW SN + Q Sbjct: 197 PERNGSATTMMYVMPVMIFFFALFS-ASGVALYWVTSNAYQVGQ 239 >gi|302521594|ref|ZP_07273936.1| membrane protein [Streptomyces sp. SPB78] gi|302430489|gb|EFL02305.1| membrane protein [Streptomyces sp. SPB78] Length = 200 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 1/87 (1%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T V+LL PL++ + P+I LR K+ ++P + +Q+A+ +L+ H Sbjct: 41 IVVLTACVRLLLLPLSRTAARGQRERAGLAPEIAALRRKYAKNP-ERMQRALTELHAEHG 99 Query: 424 INPLAGCWPILLQIPVFFAIYKVISIS 450 ++PL GC P+L Q+P FF +Y V S S Sbjct: 100 VSPLGGCLPMLCQLPFFFVLYHVFSSS 126 >gi|148544447|ref|YP_001271817.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM 20016] gi|184153811|ref|YP_001842152.1| hypothetical protein LAR_1156 [Lactobacillus reuteri JCM 1112] gi|227363125|ref|ZP_03847260.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus reuteri MM2-3] gi|325682769|ref|ZP_08162285.1| membrane protein OxaA 2 [Lactobacillus reuteri MM4-1A] gi|148531481|gb|ABQ83480.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM 20016] gi|183225155|dbj|BAG25672.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112] gi|227071843|gb|EEI10131.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus reuteri MM2-3] gi|324977119|gb|EGC14070.1| membrane protein OxaA 2 [Lactobacillus reuteri MM4-1A] Length = 316 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 35/235 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 +G+ Y ++AKPM LM + + +GN +G AI++ V V+ + P+ KK + M Sbjct: 32 YGFVYDYMAKPMQHLMEWLASHMGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKM 91 Query: 390 KNIQPKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +QP I EL EK K ++P + + + M+ LY+ +NI+ G C P+L+Q+P+F A+ Sbjct: 92 SKVQPLIKELTEKQKAAKTPEEQAAVSQQMMALYRDNNISLTGGIGCLPLLIQLPIFAAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMF 502 Y I S ++ HA F+G + P+ I + + + ++ VG+ Sbjct: 152 YAAIRYSPDLYHATFFG----IPLGKPSIILAVLSFIAYAAQSYLGLVGV---------- 197 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAVI 556 P A K Q WM F +S + AGL +Y+ + +I+Q ++ Sbjct: 198 -------PEAQKKQMKAAIWMSPFMTFFISITSSAGLGLYFFIGGLFAILQTLMV 245 >gi|302560470|ref|ZP_07312812.1| preprotein translocase YidC subunit [Streptomyces griseoflavus Tu4000] gi|302478088|gb|EFL41181.1| preprotein translocase YidC subunit [Streptomyces griseoflavus Tu4000] Length = 238 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 14/112 (12%) Query: 350 MSYFYNLVGN--------FGI-----AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 MS F +LV FG+ AI+L T FV+LL PL++ +QP+I Sbjct: 1 MSVFASLVERLADLLQPLFGVSAAAAAIVLFTAFVRLLVHPLSRAAARGQKARTALQPRI 60 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 ELR + + P + L++A+++L+ ++PL+GC P LLQ+P FF +Y + S Sbjct: 61 AELRRRHGRDPEK-LRRAVLELHTREKVSPLSGCLPSLLQVPAFFLMYHLFS 111 >gi|282865068|ref|ZP_06274121.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE] gi|282559991|gb|EFB65540.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE] Length = 263 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 54/255 (21%) Query: 346 MFMLMSYFYNLVGNFG-------------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 M MS F +LVG+ AI+L T V+L PL++ + Sbjct: 1 MSAFMSAFASLVGSLADLLQPFFQTASTAAAIILFTALVRLAVHPLSRAAARGQKARTKL 60 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---- 448 QP+I LREK ++P + +QKA+++L+ ++P +GC P LLQ+P FF +Y + S Sbjct: 61 QPQIAALREKHAKNP-ERMQKALMELHAAEKVSPFSGCLPSLLQMPAFFLLYHLFSSGSI 119 Query: 449 -------ISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +S ++ AP W LA LFG G +++G++ ++ +++ Sbjct: 120 GGTPNSLLSHDLLGAPLGERWHDALAHGG------LFG-----QAGLVYLGLFAVVAAVA 168 Query: 501 MF------IQMK---MSPPPADKGQ------AM--ILNWMPVVFVFALSSFPAGLIIYWS 543 F QM M+P GQ AM ++ M + +F+++ P +Y Sbjct: 169 TFNYGRTKRQMAANPMTPAAGPDGQPVPGMGAMTKVMPLMSFLTLFSVAVVPLAAALYLV 228 Query: 544 WSNVISIVQQAVIMK 558 S + +++A + + Sbjct: 229 TSTTWTAIERAYLYR 243 >gi|326390366|ref|ZP_08211925.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter ethanolicus JW 200] gi|325993643|gb|EGD52076.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter ethanolicus JW 200] Length = 206 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 111/217 (51%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + L+ + ++ VGN+GIAI++ T+ +++L P +Q + MK IQP ++EL++ Sbjct: 4 IAMYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMSTMKKMKEIQPLVEELQK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + PQ L ++LY+ +NP GC P+LL + + + ++ ++ A F W Sbjct: 64 KYAKD-PQKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTASFL-W 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + LA D P+Y I PI+ +++ +I M DK Q + Sbjct: 122 MHSLAQKD-----------PYY--------IIPILATVTTYISSAMV--ATDKSQNSMNI 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 161 MMSIFMGWVTVSLPAGVGIYWVTSNIFQIVQQYIFMR 197 >gi|227485753|ref|ZP_03916069.1| inner membrane insertion protein [Anaerococcus lactolyticus ATCC 51172] gi|227236308|gb|EEI86323.1| inner membrane insertion protein [Anaerococcus lactolyticus ATCC 51172] Length = 236 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 70/251 (27%), Positives = 117/251 (46%), Gaps = 44/251 (17%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNF---------GIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F FIA + LM Y N+ NF IAI++ T+ V L+ P+ Sbjct: 2 FKFIANILGKLMRILYDNIATNFTEPKTISFYAIAIIIMTLLVSLISIPVTISTQKQAEK 61 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-LAGCWPILLQIPVFFAIYK-- 445 ++ +PK+DE+++K+ QVLQK M +LYK + P L+GC P+++Q+ V F +++ Sbjct: 62 TRSFKPKMDEIQKKYGYD-QQVLQKKMQELYKQEGVTPGLSGCLPMIIQLLVLFGLFEMM 120 Query: 446 ------VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 V L F+ W+ DL ADP FG+ + ++ I Sbjct: 121 RNTGKYVFPEGLNHIRTDFY-WVPDLLKADP----LWFGLPLLTSLSQLLTTLFSI---- 171 Query: 500 SMFIQMKMSPPPADKGQAM-----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 K +P + QAM ++ +P+VF F PAGL +Y++ S+V ++ Sbjct: 172 ------KTNP---QQQQAMGSMNTMMLVLPLVFFFTFRQLPAGLPLYYTLSSVFRLLIMV 222 Query: 555 VI-MKMHGAEI 564 V+ + M G ++ Sbjct: 223 VMHLAMKGKKV 233 >gi|270308300|ref|YP_003330358.1| preprotein translocase YidC subunit [Dehalococcoides sp. VS] gi|270154192|gb|ACZ62030.1| preprotein translocase YidC subunit [Dehalococcoides sp. VS] Length = 315 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 12/181 (6%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W I PM M + +NL G+FG+ +++ TV ++L +PL +KQ +T M+ I + Sbjct: 7 WDLVILSPMINGMVWLSHNLWGSFGLTVIVLTVVIRLALWPLNRKQLTATKKMQEITVHM 66 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 + L++K Q L + ++LYK ++P P+L+Q P++ A+Y+ I L + Sbjct: 67 EALKKKHGND-RQKLAEEQMKLYKESGVSPTGCLVPMLIQFPIWIALYQAIVRVLAVTPE 125 Query: 457 PFWGWIKDLAAADPTNIFTL-----FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 F + D + P TL F + LP F +++ +SM++Q KMS P Sbjct: 126 DFMN-LADHLYSWPVVYQTLPLSNHFLWMDLSLPDFALA----LLVGVSMYVQQKMSTPK 180 Query: 512 A 512 A Sbjct: 181 A 181 >gi|333024766|ref|ZP_08452830.1| putative preprotein translocase YidC subunit [Streptomyces sp. Tu6071] gi|332744618|gb|EGJ75059.1| putative preprotein translocase YidC subunit [Streptomyces sp. Tu6071] Length = 281 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 1/87 (1%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T V+LL PL++ + P+I LR K+ ++P + +Q+A+ +L+ H Sbjct: 41 IVVLTACVRLLLLPLSRTAARGQRERAGLAPEIAALRRKYAKNP-ERMQRALTELHAEHG 99 Query: 424 INPLAGCWPILLQIPVFFAIYKVISIS 450 ++PL GC P+L Q+P FF +Y V S S Sbjct: 100 VSPLGGCLPMLCQLPFFFVLYHVFSSS 126 >gi|255102348|ref|ZP_05331325.1| hypothetical protein CdifQCD-6_16136 [Clostridium difficile QCD-63q42] gi|255308247|ref|ZP_05352418.1| hypothetical protein CdifA_16766 [Clostridium difficile ATCC 43255] Length = 216 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI+ + L+S +N G+FGI+I+L T+ VKL+ PL+ KQ S + + K++ ++ Sbjct: 3 FISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEHIK 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH---AP 457 EK+K ++ + IQ+ ++ + GC +L+Q+PV +A+Y V L+M Sbjct: 63 EKYKNDTKEL--EKQIQVSSVESMKSMLGCLIVLVQMPVVYALYHV---CLDMTKEFTTI 117 Query: 458 FWGWIKDLAAADPTNIFTL 476 WI +L D N+F L Sbjct: 118 IIPWIANLGTFD--NLFIL 134 >gi|312870531|ref|ZP_07730649.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus oris PB013-T2-3] gi|311093928|gb|EFQ52254.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus oris PB013-T2-3] Length = 314 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 116/235 (49%), Gaps = 35/235 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 +G+ Y ++AKPM LM + +GN +G AI++ V V+ + P+ KK ++ M Sbjct: 32 YGFVYDYMAKPMQHLMEWLAAHLGNNYGWAIIVIVVVVRSILLPVMFSQMKKSTITQEKM 91 Query: 390 KNIQPKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 ++P I EL EK K ++P + + + M+ LY+ +NI+ G C P+L+Q+PVF A+ Sbjct: 92 AKVRPLIKELSEKQKAAKTPEEQAAVSQQMMALYRDNNISITGGIGCLPLLIQLPVFAAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMF 502 Y I S ++ HA F+G +A P+ I + + + ++ +G+ Sbjct: 152 YAAIRYSPDLYHAEFFG----IALGKPSIILAVLSFIAYAAQSYLGLIGV---------- 197 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAVI 556 P K Q + WM F +S + AGL +Y+ + +I+Q ++ Sbjct: 198 -------PEEQKKQMKMAIWMSPFMTFFISLTSSAGLGLYFFIGGLFAILQTLMV 245 >gi|312133635|ref|YP_004000974.1| yidc2 [Bifidobacterium longum subsp. longum BBMN68] gi|311772893|gb|ADQ02381.1| YidC2 [Bifidobacterium longum subsp. longum BBMN68] Length = 335 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 122/265 (46%), Gaps = 48/265 (18%) Query: 331 EMLID---WGWFYFIAKPMFMLMSYFYNLVGNFGI-------------AIMLTTVFVKLL 374 E L+D WG+ Y I P+ L ++ +V +F + AI++ + V+ Sbjct: 5 EFLLDSGFWGFLYKILTPVEWLQTWIMKIVHDFFVMLGVSPIGVSWVLAIIILVLVVQAC 64 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGC 430 FPL KQ S M+ + PK+ ++ K+K Q ++AM ++LY+ ++ NP C Sbjct: 65 IFPLFYKQMKSMRKMQALAPKMQRIQNKYKGKTDQASKEAMSRETMKLYQDNDANPAGSC 124 Query: 431 WPILLQIPVFFAIYKVIS----ISLEMRHA--PFWGWIKDLAAADPTNIFTLFGILPF-- 482 P+L+Q PVF +++ +S I+ R A F D+A A +FGI+ Sbjct: 125 LPMLIQGPVFMSMFYTLSAIPYIANGKRDALGAF-----DVATAKQFTQTDVFGIVSVTD 179 Query: 483 -----YLPGFMHVGIWPIIMSLSM----FIQMKMSPPPA------DKGQAMILNWMPVVF 527 G +GI+ +M + + MK + A + Q +L PV++ Sbjct: 180 NFTSAAASGKAVIGIFVFLMCFCLWFMQYFSMKRNMAAASMNKQTETMQKAMLWLFPVMY 239 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQ 552 +F+ + P +++YW +NV ++ + Sbjct: 240 IFSGVAMPFAVLVYWLTNNVCNLCR 264 >gi|254976798|ref|ZP_05273270.1| hypothetical protein CdifQC_15858 [Clostridium difficile QCD-66c26] gi|255094184|ref|ZP_05323662.1| hypothetical protein CdifC_16201 [Clostridium difficile CIP 107932] gi|255315936|ref|ZP_05357519.1| hypothetical protein CdifQCD-7_16339 [Clostridium difficile QCD-76w55] gi|255518595|ref|ZP_05386271.1| hypothetical protein CdifQCD-_15858 [Clostridium difficile QCD-97b34] gi|255651715|ref|ZP_05398617.1| hypothetical protein CdifQCD_16123 [Clostridium difficile QCD-37x79] gi|260684747|ref|YP_003216032.1| hypothetical protein CD196_3018 [Clostridium difficile CD196] gi|260688405|ref|YP_003219539.1| hypothetical protein CDR20291_3064 [Clostridium difficile R20291] gi|306521514|ref|ZP_07407861.1| hypothetical protein CdifQ_18521 [Clostridium difficile QCD-32g58] gi|260210910|emb|CBA66127.1| putative membrane protein [Clostridium difficile CD196] gi|260214422|emb|CBE06852.1| putative membrane protein [Clostridium difficile R20291] Length = 216 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI+ + L+S +N G+FGI+I+L T+ VKL+ PL+ KQ S + + K++ ++ Sbjct: 3 FISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEHIK 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH---AP 457 EK+K ++ + IQ+ ++ + GC +L+Q+PV +A+Y V L+M Sbjct: 63 EKYKNDTKEL--EKQIQVSSVESMKSMLGCLIVLVQMPVVYALYHV---CLDMTKEFTTI 117 Query: 458 FWGWIKDLAAADPTNIFTL 476 WI +L D N+F L Sbjct: 118 IIPWIANLGTFD--NLFIL 134 >gi|294781807|ref|ZP_06747140.1| stage III sporulation protein J [Fusobacterium sp. 1_1_41FAA] gi|294481917|gb|EFG29685.1| stage III sporulation protein J [Fusobacterium sp. 1_1_41FAA] Length = 206 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 78/224 (34%), Positives = 119/224 (53%), Gaps = 36/224 (16%) Query: 350 MSYFYNL---------------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 MSY YNL VGNFG++I++ T+ +K+ PL KQ ST MK +QP Sbjct: 1 MSYLYNLLKQFLALLLTTTDKYVGNFGVSIIIVTILIKIALLPLTLKQDKSTKEMKKLQP 60 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +I++L+EK+ Q+L ++LYK H +NPL GC P+LLQ+P+ FA++ V+ + Sbjct: 61 EIEKLKEKYAND-KQMLNIKTMELYKEHKVNPLGGCLPLLLQLPILFALFGVLRSGIIPA 119 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + F W+K L DP F ILP L G ++S F Q M ++ Sbjct: 120 DSSFL-WLK-LPEPDP------FFILPV-LNG-----------AVSFFQQKLMGSADSNP 159 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ P++ +F P+GL +YW S+V+++VQQ IMK Sbjct: 160 QMKNMMYIFPIMMIFISYRMPSGLQLYWLTSSVLAVVQQYFIMK 203 >gi|322411167|gb|EFY02075.1| OxaA-like protein precursor [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 307 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 69/250 (27%), Positives = 112/250 (44%), Gaps = 38/250 (15%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQP 394 F+ KPM + YF N G +G+AI++ T+ V+ L PL K Y S M ++P Sbjct: 40 FLGKPMSYFIDYFANNAGLGYGLAIIIVTIVVRTLILPLGLYQSWKASYQSE-KMAFLKP 98 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVIS 448 + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 99 VFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQ 158 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F G DL + + + L F+ W LSM M +S Sbjct: 159 YTKGVSTSTFMGI--DLGSRSLV-LTAIIAALYFFQS-------W-----LSM---MAVS 200 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 ++ + M+ MP++ + S PAG+ +YW SI+QQ + + L Sbjct: 201 EEQREQMKTMMYT-MPIMMIVMSFSLPAGVGLYWLVGGFFSIIQQLITTYI------LKP 253 Query: 569 RLRSTFSKNY 578 RL F + Y Sbjct: 254 RLHKQFEEEY 263 >gi|227494185|ref|ZP_03924501.1| inner membrane insertion protein [Actinomyces coleocanis DSM 15436] gi|226831919|gb|EEH64302.1| inner membrane insertion protein [Actinomyces coleocanis DSM 15436] Length = 433 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 64/103 (62%), Gaps = 4/103 (3%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK----QSPPQVLQKAMIQ 417 ++I+ T+ V+ L PL +Q + M+ +QP++ +L+EK+K Q+ Q + + M+ Sbjct: 40 LSIIGLTMIVRTLLIPLFFRQIKAARGMQLVQPELKKLQEKYKDRKDQASKQKMSEEMMA 99 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 LY+ H +P A C PIL+Q+P+FFA+++V++ + + + G Sbjct: 100 LYREHGTSPFASCMPILMQMPIFFALFRVLASTATLAEGKYPG 142 >gi|227547516|ref|ZP_03977565.1| inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212031|gb|EEI79927.1| inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 335 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 48/265 (18%) Query: 331 EMLID---WGWFYFIAKPMFMLMSYFYNLVGNFGI-------------AIMLTTVFVKLL 374 E L+D WG+ Y I P+ L ++ +V +F + AI++ + V+ Sbjct: 5 EFLLDSGFWGFLYKILTPVEWLQTWIMKIVHDFFVMLGVSPIGVSWVLAIIILVLVVQAC 64 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPLAGC 430 FPL KQ S M+ + PK+ ++ K+K Q+ + + + +++LY+ ++ NP C Sbjct: 65 IFPLFYKQMKSMRKMQALAPKMQRIQNKYKGKTDQASKEAMSREIMKLYQDNDANPAGSC 124 Query: 431 WPILLQIPVFFAIYKVIS----ISLEMRHA--PFWGWIKDLAAADPTNIFTLFGILPF-- 482 P+L+Q PVF +++ +S I+ R A F D+A A +FGI+ Sbjct: 125 LPMLIQGPVFMSMFYTLSAIPYIANGKRDALGAF-----DVATAKQFTQTDVFGIVSVTD 179 Query: 483 -----YLPGFMHVGIWPIIMSLSM----FIQMKMSPPPA------DKGQAMILNWMPVVF 527 G +GI+ +M + + MK + A + Q +L PV++ Sbjct: 180 NFTSAAASGKAVIGIFVFLMCFCLWFMQYFSMKRNMAAASMNKQTETMQKAMLWLFPVMY 239 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQ 552 +F+ + P +++YW +NV ++ + Sbjct: 240 IFSGVAMPFAVLVYWLTNNVCNLCR 264 >gi|310641889|ref|YP_003946647.1| oxaa-like protein [Paenibacillus polymyxa SC2] gi|309246839|gb|ADO56406.1| OxaA-like protein [Paenibacillus polymyxa SC2] Length = 277 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 10/112 (8%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----IQPKIDELREKFKQ----SPPQ 409 G+FG+AIM T V+L PL +Q + MK +QP +D +++K++ + Q Sbjct: 68 GSFGLAIMTLTFIVRLALLPLMMRQTRAQQGMKRKMSAMQPDLDRIKKKYENKKDANSQQ 127 Query: 410 VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEM-RHAPFW 459 +Q+ M+ LYK H NPL GC PIL+Q+P+ +Y I ++ E+ H+ W Sbjct: 128 SMQQEMMSLYKEHQFNPLNIGCLPILIQLPILSGMYTAIRLTPELASHSFLW 179 >gi|317133706|ref|YP_004093020.1| membrane protein insertase, YidC/Oxa1 family [Ethanoligenens harbinense YUAN-3] gi|315471685|gb|ADU28289.1| membrane protein insertase, YidC/Oxa1 family [Ethanoligenens harbinense YUAN-3] Length = 405 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 75/279 (26%), Positives = 127/279 (45%), Gaps = 68/279 (24%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F I P+ L+ + Y L N+G+AI+L T+ +++L PLA KQ S A+ +QPK+ Sbjct: 10 FDIINIPLGFLLRFCYQLTNNYGLAIILLTLIIRILLVPLAVKQQKSMAHTVRLQPKLQA 69 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--------SIS 450 L++K + Q LQ+ ++LY+ NP+ GC P+L Q+P+ + +Y VI +S Sbjct: 70 LQKKHANN-KQKLQEEQMKLYQEEGANPMGGCLPLLFQLPILYGLYNVIYHPLLYIVQLS 128 Query: 451 LEMRHAPFW--------------------------GWIKDLAAA-----------DPTNI 473 +++++ + G ++ AA P N+ Sbjct: 129 VDVKNRVVYDLFSILKTTYPSVFGKMSTPSQALSNGQVEIYAAKLMPNHMDKLSFLPANV 188 Query: 474 ----FTLFGILPFYLPGFMHVGIW---PIIMSLSMFIQMKMSP-----------PPADKG 515 F G+ +PG+ + I+ PI LS FIQ+ +S P G Sbjct: 189 LKLDFNFLGLDLSVVPGW-QISIYLLIPIFCYLSSFIQVWLSTRINKENNIAANAPGTGG 247 Query: 516 Q--AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M+L MP++ + S P+G+ +YW SN+I + Q Sbjct: 248 MNIGMML-IMPLMSAYISISVPSGVGLYWIASNLIMLAQ 285 >gi|257898075|ref|ZP_05677728.1| inner membrane protein [Enterococcus faecium Com15] gi|257835987|gb|EEV61061.1| inner membrane protein [Enterococcus faecium Com15] Length = 316 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 106/226 (46%), Gaps = 32/226 (14%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + + PM ++Y N ++G A++ TV V+++ PL +KK + + M+ ++ Sbjct: 39 YRVLVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALK 98 Query: 394 PKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+++ ++K K + + Q M Q+Y+ + ++ G C P+L+Q+P+F A+Y Sbjct: 99 PQVEAAQQKLKAATTREEQMSAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + +R + F+G DL + P+ + + + L G++ +GI Sbjct: 159 RYTEGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGI-------------- 200 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K +L P + VF S PAG+ +YW V S +Q Sbjct: 201 --PEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQ 244 >gi|307152649|ref|YP_003888033.1| membrane protein insertase, YidC/Oxa1 family [Cyanothece sp. PCC 7822] gi|306982877|gb|ADN14758.1| membrane protein insertase, YidC/Oxa1 family [Cyanothece sp. PCC 7822] Length = 382 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 10/128 (7%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ Q + M+ Q Sbjct: 1 MDFGVGFISTNIMLPILDFFYRIVPSYGFAIIALTLVIRFALYPLSAGQIRNMRKMRITQ 60 Query: 394 PKIDELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + E +E+ + ++ PQ Q+ M ++ + NPLAGC P+LLQ+P+ FA++ Sbjct: 61 PLMKERQEEIQKRYKNDPQKQQEEMSKIMQEFG-NPLAGCLPLLLQMPILFALFAT---- 115 Query: 451 LEMRHAPF 458 +R +PF Sbjct: 116 --LRGSPF 121 >gi|292559000|gb|ADE32001.1| putative inner membrane protein [Streptococcus suis GZ1] Length = 304 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 71/232 (30%), Positives = 106/232 (45%), Gaps = 33/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANM 389 GW Y F+ PM L+ +F G FG+AI++ T+ V+L PL K Y S M Sbjct: 35 GWVYNFLVAPMGNLIKFFAENQGLGFGVAIIIVTLIVRLFIMPLGIYQSWKSTYQSE-KM 93 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPLA--GCWPILLQIPVFFAI 443 ++P + ++E+ K + Q Q A Q Y K + ++ GC PIL+Q+P F A+ Sbjct: 94 NYLKPILGPIQERMKNASSQEEQLAAQQEYFAAQKQYGVSVFGGMGCLPILIQMPFFTAL 153 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + + + A F G DL +A + + GIL + M VG M Sbjct: 154 FYAARYTEGISEATFLGI--DLGSASLI-LTAIAGILYYAQSLLMQVG-----MDEEQKK 205 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 QMK I+N P++ V S PAG+ +YW I +VQQA+ Sbjct: 206 QMK---------AVAIMN--PLMIVMFSWSSPAGVTLYWVVGGFIGLVQQAL 246 >gi|297545654|ref|YP_003677956.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843429|gb|ADH61945.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 206 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 23/210 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + Y VGN+GIAI++ T+ +++L P +Q + MK IQP I EL++K+ + P Sbjct: 11 LLEFIYKYVGNYGIAIIIFTILIRILLLPFYVQQMNTMKKMKEIQPLIQELQKKYAKD-P 69 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q L ++LY+ +NP GC P+LL + + + ++ ++ A F W+ LA Sbjct: 70 QKLNIETMKLYQEKKVNPFGGCLPMLLPLIILWPLFAMLRTYPAFSTASFL-WMHSLAER 128 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I PI+ +++ +I M DK Q + M + Sbjct: 129 DPYYII-------------------PILATVTTYISSAMV--ATDKSQNSMNIMMSIFIG 167 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 168 WITVSLPAGIGIYWVTSNIFQIVQQYIFMR 197 >gi|255657156|ref|ZP_05402565.1| hypothetical protein CdifQCD-2_15996 [Clostridium difficile QCD-23m63] gi|296452006|ref|ZP_06893721.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile NAP08] gi|296879599|ref|ZP_06903578.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile NAP07] gi|296259197|gb|EFH06077.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile NAP08] gi|296429402|gb|EFH15270.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile NAP07] Length = 216 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI+ + L+S +N G+FGI+I+L T+ VKL+ PL+ KQ S + + K++ ++ Sbjct: 3 FISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEHIK 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH---AP 457 EK+K ++ + IQ+ ++ + GC +L+Q+PV +A+Y V L+M Sbjct: 63 EKYKNDTKEL--EKQIQVNSVESMKSMLGCLIVLVQMPVVYALYHV---CLDMTKEFTTI 117 Query: 458 FWGWIKDLAAADPTNIFTL 476 WI +L D N+F L Sbjct: 118 IIPWIANLGTFD--NLFIL 134 >gi|227514115|ref|ZP_03944164.1| inner membrane insertion protein [Lactobacillus fermentum ATCC 14931] gi|227087486|gb|EEI22798.1| inner membrane insertion protein [Lactobacillus fermentum ATCC 14931] Length = 277 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 23/223 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N+ G +G+ I++ T+ ++++ PL Q S + + P++ Sbjct: 37 WDHYIVYNCSRFIIWLSNIFGGYGMGIIIFTIIIRIIILPLMFYQTKSMMKTQELAPQLK 96 Query: 398 ELREKFKQSPPQVLQKAMIQ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++K+ + +Q+ I+ LYK +NP A P+L+Q+PV +A+Y+ I + +++ Sbjct: 97 ALQKKYSSKDRETMQQLQIEQQKLYKEAGVNPFASMLPLLIQLPVMWALYQAIWRTAQLK 156 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F W++ L DP + +LP F + W + M+ P Sbjct: 157 TGTFL-WLQ-LGHTDP------YFVLPILAAVFTFISSW-----------LSMASMPEKN 197 Query: 515 GQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + W MP++ F F A + +YW +N +VQ VI Sbjct: 198 SMTTTMTWVMPIMIFFMALQFSAAITLYWVVTNAFQVVQTLVI 240 >gi|171779011|ref|ZP_02920019.1| hypothetical protein STRINF_00894 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282369|gb|EDT47794.1| hypothetical protein STRINF_00894 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 271 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 35/225 (15%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF AK + L ++ G G+ I+L T+ ++ + PL Q S M+N+Q Sbjct: 33 GWEQIVYFFAKAIQWL-----SINGRIGVGIVLFTIIIRAIMMPLYNMQIKSGQKMQNLQ 87 Query: 394 PKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ +L+EK+ L + LYK + +NP A P+++Q+P+ A+Y+ ++ Sbjct: 88 PELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVVQLPILMALYQALTRV 147 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 ++ F WI +L+ D P+Y I P++ +L F+ ++ Sbjct: 148 AFLKTGTFL-WI-ELSQPD-----------PYY--------ILPVLAALFTFLSTWLTNK 186 Query: 511 PA-DKGQAMILNW--MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 A +K AM L MP++ F +G+++YW+ SN + Q Sbjct: 187 AAREKNFAMTLMTYVMPIIIFFFGFRLASGVVLYWTVSNAFQVFQ 231 >gi|327440675|dbj|BAK17040.1| preprotein translocase subunit YidC [Solibacillus silvestris StLB046] Length = 253 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 116/233 (49%), Gaps = 42/233 (18%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN--- 391 G+FY +PM ++ F L G++G+AI+ + ++L+ P K Y S A MK Sbjct: 28 GFFYSTFVRPMDWTLNTFGELFNGSYGLAIIAIILIIRLVLMPFMLKTYRSQATMKVKMD 87 Query: 392 -IQPKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 ++P++++++ + K ++P + +Q+ M+ LYK HNINPL GC P L+Q+P+ +Y Sbjct: 88 FVRPQMEDIQTRLKAAKTPEERMTVQQEMMSLYKEHNINPLNMGCLPALIQMPIIMGLYY 147 Query: 446 VISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-PIIMSLSMFI 503 I S E++ H+ W DL + D IW I + F+ Sbjct: 148 AILYSAEIKTHSFLWF---DLGSTD----------------------IWMTAIAGVVYFV 182 Query: 504 QMKMS---PPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 Q K+S P A K Q ++ ++ P++ V S A L +YW+ + IVQ Sbjct: 183 QAKVSLQTVPEAQKNQMKLMIYVSPIMIVIISLSSMAALPLYWAVGGLFLIVQ 235 >gi|328956995|ref|YP_004374381.1| membrane protein OxaA [Carnobacterium sp. 17-4] gi|328673319|gb|AEB29365.1| membrane protein OxaA [Carnobacterium sp. 17-4] Length = 307 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 102/207 (49%), Gaps = 29/207 (14%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQS----P 407 L G++G+AI++ T+ V+L+ PL +KK + M I+P+++E+++K K + Sbjct: 55 LGGSYGLAIIVITLVVRLIILPLNLSQSKKSIIQQEKMALIKPEMEEVQKKQKSAVTAEE 114 Query: 408 PQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q+ ++ LYK +N++ L G C P+L+Q+P+F A+++ I++S E+ ++ F G+ Sbjct: 115 KAAAQQELMSLYKDNNMSMLGGIGCLPLLIQMPIFTAMFQAINLSKEIGNSTFLGF---- 170 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 + NI Y + ++ M P K ++ P+ Sbjct: 171 -SLGDQNIALAIAAGAVYF--------------VQSYVSMIGLPDEQKKQMRTMMYVSPI 215 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + + PAGL +YW + ++ Q Sbjct: 216 MILMVSFTSPAGLGLYWFVGGIFAVFQ 242 >gi|327472485|gb|EGF17916.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK408] Length = 271 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 21/207 (10%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ QP I L+EK+ Sbjct: 47 FLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEAQPHIKRLQEKYPGKDMESRT 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L + +LYK +NP A P+ +Q+PV A+++ ++ M+ F W+ +L A D Sbjct: 107 ALAEETQKLYKEMGVNPYASFIPLFIQMPVLLALFQALTRVDFMKTGHFL-WL-NLGATD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT I L L F + W +L P + G +++ +PV F Sbjct: 165 PTFILPLLAAL------FTFLSTWLSNKAL----------PERNGGMTVMMYLLPVAIFF 208 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 +G+ +YW+ SN +VQ ++ Sbjct: 209 FAFYAASGVALYWAVSNAYQVVQTLLL 235 >gi|55821782|ref|YP_140224.1| cytochrome oxidase biogenesis (Oxa1) family protein, SpoIIIJ [Streptococcus thermophilus LMG 18311] gi|55823700|ref|YP_142141.1| hypothetical protein str1810 [Streptococcus thermophilus CNRZ1066] gi|116628498|ref|YP_821117.1| preprotein translocase subunit YidC [Streptococcus thermophilus LMD-9] gi|55737767|gb|AAV61409.1| cytochrome oxidase biogenesis (Oxa1) family protein, similar to SpoIIIJ [Streptococcus thermophilus LMG 18311] gi|55739685|gb|AAV63326.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] gi|116101775|gb|ABJ66921.1| Preprotein translocase subunit YidC [Streptococcus thermophilus LMD-9] gi|312279125|gb|ADQ63782.1| Preprotein translocase subunit YidC [Streptococcus thermophilus ND03] Length = 268 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 25/189 (13%) Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINP 426 T+ ++ + PL +Q S+ ++ +QP++ L+ ++ + + L A +LYK H +NP Sbjct: 62 TILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYAQQELYKEHGVNP 121 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 A P+++Q P+ A+Y ++ E+R F W+ DL DP + ILP Sbjct: 122 YASFLPLIIQFPILMALYGALTRVPELREGSFL-WV-DLGQKDP------YFILPILAAA 173 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWMPVVFVFALSS-FPAGLIIYWS 543 F + W ++ A AM ++N M +F+F + +G+ +YW+ Sbjct: 174 FTFLSTW-------------LTNKVAKDRSAMLIVMNIMLPIFIFWFGTQISSGVALYWT 220 Query: 544 WSNVISIVQ 552 SN +VQ Sbjct: 221 VSNAFQVVQ 229 >gi|300814725|ref|ZP_07094973.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511112|gb|EFK38364.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 244 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 45/236 (19%) Query: 348 MLMSYFYNLVGN-----------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + + Y YNL+ + ++I++TT+ +K+L PL Q + M +QP+I Sbjct: 11 IFIRYVYNLIAQIIPNEPTNISYYALSIIITTLILKILVLPLTISQMKNQKKMAELQPEI 70 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--SISLEMR 454 ++++K+K PQ L QLYK+ N N L+GC P+++Q+ V F Y+ + Sbjct: 71 AKIQKKYKND-PQTLAMKQRQLYKSANYNVLSGCLPMIVQLLVLFGFYRCFYKPQTYIFS 129 Query: 455 HAPFWG-------WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 A F+ +I +L AD T I + + ++ Sbjct: 130 QAGFYQAMNKNFFYISNLGVADKTMILPALAAITTFFTSYLAT----------------- 172 Query: 508 SPPPADKGQAM-------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P A GQ ++ MP++ F + A LIIYW+ SN+ +IVQQ V+ Sbjct: 173 KSPAAGAGQDQAKSMMNSMMVAMPIMIFFMGRTLQAELIIYWTVSNIFAIVQQLVV 228 >gi|297160114|gb|ADI09826.1| hypothetical protein SBI_06706 [Streptomyces bingchenggensis BCW-1] Length = 240 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 16/144 (11%) Query: 349 LMSYFYNLVGN-FGI-----AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 L+S+F + + FG AI+L T+ V+ PLA+ + PK+ EL + Sbjct: 10 LLSWFADCLAPLFGASATAAAIVLFTLCVRAALHPLARAAVRGEKARAALAPKVAELNRR 69 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--------ISLEMR 454 K+ P + L+ AM +LY+ +++P+AGC P L+Q+PVFF +Y + S + + Sbjct: 70 HKRDPER-LRHAMAELYEKESVSPVAGCLPTLVQLPVFFVMYHLFSTGSGAGDLLDHTLA 128 Query: 455 HAPFWG-WIKDLAAADPTNIFTLF 477 AP G W DLA LF Sbjct: 129 GAPLGGRWGGDLAGPHGAVYLALF 152 >gi|257867718|ref|ZP_05647371.1| inner membrane protein [Enterococcus casseliflavus EC30] gi|257874045|ref|ZP_05653698.1| inner membrane protein [Enterococcus casseliflavus EC10] gi|257876623|ref|ZP_05656276.1| inner membrane protein [Enterococcus casseliflavus EC20] gi|257801801|gb|EEV30704.1| inner membrane protein [Enterococcus casseliflavus EC30] gi|257808209|gb|EEV37031.1| inner membrane protein [Enterococcus casseliflavus EC10] gi|257810789|gb|EEV39609.1| inner membrane protein [Enterococcus casseliflavus EC20] Length = 306 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 59/235 (25%), Positives = 112/235 (47%), Gaps = 35/235 (14%) Query: 339 FYFIAKPMF-MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + F+ KP+ M+ N ++G AI+ T+ V+++ PL ++K V + M+ ++ Sbjct: 36 YRFLVKPLGDMITMLVENFNWSYGWAIIAVTIVVRVIILPLGIHQSRKTMVQSEKMQFLK 95 Query: 394 PKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P++D + K++ + Q M ++Y +N++ G C P+L+Q+P+F A+Y Sbjct: 96 PQVDIAQANLKKATTREEQMQAQAEMQKIYSENNVSMFGGIGCLPLLIQMPIFSALYFTA 155 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + ++++ F+G ++ DP+ +F L + G++ +GI Sbjct: 156 RYTQGIQNSEFFG----VSLGDPSILFVAIAGLSYLAQGYISTIGI-------------- 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ---QAVIMK 558 P K +L P++ VF S PAG+ +YW V S +Q VIMK Sbjct: 198 --PEEQKKTMKTMLIVSPLMIVFMSMSAPAGVTLYWVVGGVFSCIQTFITNVIMK 250 >gi|116630024|ref|YP_815196.1| preprotein translocase subunit YidC [Lactobacillus gasseri ATCC 33323] gi|238853789|ref|ZP_04644155.1| preprotein translocase subunit YidC [Lactobacillus gasseri 202-4] gi|311110346|ref|ZP_07711743.1| membrane protein chaperone OxaA [Lactobacillus gasseri MV-22] gi|116095606|gb|ABJ60758.1| Preprotein translocase subunit YidC [Lactobacillus gasseri ATCC 33323] gi|238833598|gb|EEQ25869.1| preprotein translocase subunit YidC [Lactobacillus gasseri 202-4] gi|311065500|gb|EFQ45840.1| membrane protein chaperone OxaA [Lactobacillus gasseri MV-22] Length = 327 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 36/236 (15%) Query: 336 WGW-FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL--AKKQYVSTANM 389 + W F KP+ +M + +G G AI++ T V+L+ PL A ++ ++T Sbjct: 40 YAWVFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 390 KN--IQPKIDELREKFKQ---SPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVF 440 K +QP++ ++E K+ + PQ +Q + +Q+ YK +N++ + G C P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKDNNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSL 499 IY+ ++ S E+ + F+G ++ + + T+ L + + G++ VGI Sbjct: 160 IGIYQAVAYSKELAASSFFG----ISLGQRSIVLTIIATLLYVIQGYLSMVGI------- 208 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K M L P + F S P L +Y+ +I+I+QQ + Sbjct: 209 ---------PEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQVI 255 >gi|329667744|gb|AEB93692.1| putative membrane protein [Lactobacillus johnsonii DPC 6026] Length = 327 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 114/236 (48%), Gaps = 36/236 (15%) Query: 336 WGW-FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL--AKKQYVSTANM 389 + W F KP+ +M + +G G AI++ T V+L+ PL A ++ ++T Sbjct: 40 YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 390 KN--IQPKIDELREKFKQ---SPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVF 440 K +QP++ ++E K+ + PQ +Q + +Q+ YK +N++ + G C P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSL 499 IY+ ++ S E+ + F+G ++ + I T+ L + + G++ VGI Sbjct: 160 MGIYQAVAYSKELAASSFFG----ISLGQRSIILTIIATLLYVVQGYLSMVGI------- 208 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K M L P + F S P L +Y+ +I+I+QQ + Sbjct: 209 ---------PEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLI 255 >gi|322390329|ref|ZP_08063857.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis ATCC 903] gi|321142977|gb|EFX38427.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis ATCC 903] Length = 279 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 33/224 (14%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF A+ + F + G+ G+ I++ T+ ++ + PL + Q ST M+ IQ Sbjct: 41 GWERFVYFFAEAI-----RFLSFGGSIGVGIIVFTIVIRTVLLPLFQYQMNSTRKMQEIQ 95 Query: 394 PKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + EL+ K+ L + M LYK + + P+L+Q+PV A+++ +S Sbjct: 96 PLLKELQAKYPGKDLDSRTKLSEEMRALYKEKGVKTSSAFLPLLIQMPVLMALFQALS-R 154 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E + W+ DL A DPT ILP F W +L Sbjct: 155 VEFLKVGHFLWL-DLGAIDPTY------ILPVLAALFTFFSSWLTNKAL----------- 196 Query: 511 PADKGQAMILNW-MPV-VFVFALSSFPAGLIIYWSWSNVISIVQ 552 P G A + + MPV +F FAL S +G+ +YW SN + Q Sbjct: 197 PERNGSATTMMYVMPVMIFFFALFS-ASGVALYWVTSNAYQVGQ 239 >gi|163790185|ref|ZP_02184618.1| integral membrane protein [Carnobacterium sp. AT7] gi|159874460|gb|EDP68531.1| integral membrane protein [Carnobacterium sp. AT7] Length = 307 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 29/205 (14%) Query: 358 GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQS----PPQ 409 G++G++I+ T+ V+L+ PL +KK + M I+P++DE+++K K + Sbjct: 57 GSYGLSIIAITLAVRLIIMPLNLSQSKKSIIQQEKMALIKPEMDEVQKKQKAAVTAEEKA 116 Query: 410 VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q+ ++ LYK +N++ L G C P+L+Q+PVF A+++ I++S E+ ++ F G+ + Sbjct: 117 AAQQELMSLYKDNNMSMLGGIGCLPLLIQMPVFTAMFQAINLSTEISNSTFLGF-----S 171 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 NI Y + ++ M P K ++ P++ Sbjct: 172 LGNQNIALAIAAGAVYF--------------VQSYVSMIGLPDEQKKQMRTMMYVSPIMI 217 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQ 552 + + PAGL +YW + ++ Q Sbjct: 218 LMVSFTSPAGLGLYWFVGGIFAVFQ 242 >gi|322388371|ref|ZP_08061974.1| stage III sporulation protein J [Streptococcus infantis ATCC 700779] gi|321140684|gb|EFX36186.1| stage III sporulation protein J [Streptococcus infantis ATCC 700779] Length = 271 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 27/200 (13%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ + P+ + Q V++ M+ QP I ELRE++ L + Sbjct: 53 SIGLGIILFTVLIRTILLPVFQTQMVASRKMQEAQPLIKELRERYPGRDMESRTKLDQET 112 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +L+K I A WP+L+Q+P+ A+++ +S +++ + W +L AD T + Sbjct: 113 RKLFKELGIKQSASFWPLLIQMPILLALFQALS-NVDFLKTGHFLWF-NLGGADTTFVL- 169 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMILNWMPVVFVFALS 532 PI+ +L F+ +S P + ++ MPV+ F Sbjct: 170 ------------------PILAALFTFLSSWLSNKALPEKNGAMTGMMYGMPVIIFFFAI 211 Query: 533 SFPAGLIIYWSWSNVISIVQ 552 S P+G+ +YW+ SN + Q Sbjct: 212 SAPSGVALYWAVSNAYQVFQ 231 >gi|294790220|ref|ZP_06755378.1| membrane protein OxaA [Scardovia inopinata F0304] gi|294458117|gb|EFG26470.1| membrane protein OxaA [Scardovia inopinata F0304] Length = 330 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/259 (25%), Positives = 134/259 (51%), Gaps = 38/259 (14%) Query: 332 MLID---WGWFYFIAKPMFMLMSY----FYNL------VGNFGIAIMLTTVFVKLLFFPL 378 M++D +GWFY I +P+ + ++Y F+++ +G G+A +++ + + +L L Sbjct: 1 MVLDRGFFGWFYTILRPLEIALTYVIKFFHDILTAIGVIGGQGVAWVISVMLLVVLVRLL 60 Query: 379 AK----KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGC 430 KQ VS NM+ +QP++ +++ K+K Q ++AM ++LY+ ++ NP C Sbjct: 61 ILPLFIKQMVSMRNMQAMQPQLQKIQRKYKGKNDQASREAMSRETMKLYQENHANPAGSC 120 Query: 431 WPILLQIPVFFAIYKVISISLEM---RHAPFWGWIKDL----AAADPTNIFTLFGILPFY 483 P LLQ PVF A++ +S + + P + K++ A A NI Sbjct: 121 LPALLQSPVFMAMFYTLSAVTYIANGQRGPLGAFNKEVSTEFANAKVFNITLASMFNSED 180 Query: 484 LPGFMHVGIWPIIMSLSMFIQM-----KMSPPPADKGQA----MILNWM-PVVFVFALSS 533 G + +GI+ +M L+MF + P + +G + M ++++ P++++F+ + Sbjct: 181 TGGKITIGIFVALMCLTMFYSQWHNVRRNMPRTSMQGNSYRTQMAMSFIFPIMYIFSGIT 240 Query: 534 FPAGLIIYWSWSNVISIVQ 552 FP +++YW +N+ ++ Q Sbjct: 241 FPFAVLVYWLTNNMWTLGQ 259 >gi|238478612|ref|NP_001154364.1| ALB4 (ALBINA 4) [Arabidopsis thaliana] gi|332192419|gb|AEE30540.1| ALBINO3-like protein 1 [Arabidopsis thaliana] Length = 462 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 22/194 (11%) Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 MK++ P+I ++E++ ++ Q +LYK INPLAGC P L IPV+ +Y+ +S Sbjct: 116 MKSLTPQIKAIQERYAGDQEKI-QLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALS 174 Query: 449 -ISLEMRHAPFWGWIKDLAA----ADPTNIFTLFGILPFYLPGFMHVGIWPIIMS----- 498 ++ E + WI LA A N + + PF + G +G WP ++ Sbjct: 175 NVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPF-IEGHPPLG-WPDTLAYLVLP 232 Query: 499 --------LSMFI-QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 LS+ I Q S PA K + +P++ + S P+GL +YW +N++S Sbjct: 233 LLLVFSQYLSIQIMQSSQSNDPAMKSSQAVTKLLPLMIGYFALSVPSGLSLYWLTNNILS 292 Query: 550 IVQQAVIMKMHGAE 563 QQ + K GA+ Sbjct: 293 TAQQVWLQKYGGAK 306 >gi|42519505|ref|NP_965435.1| hypothetical protein LJ1629 [Lactobacillus johnsonii NCC 533] gi|41583793|gb|AAS09401.1| hypothetical protein LJ_1629 [Lactobacillus johnsonii NCC 533] Length = 327 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 114/236 (48%), Gaps = 36/236 (15%) Query: 336 WGW-FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL--AKKQYVSTANM 389 + W F KP+ +M + +G G AI++ T V+L+ PL A ++ ++T Sbjct: 40 YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 390 KN--IQPKIDELREKFKQ---SPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVF 440 K +QP++ ++E K+ + PQ +Q + +Q+ YK +N++ + G C P+L+Q+P+ Sbjct: 100 KTQKLQPQMRLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSL 499 IY+ ++ S E+ + F+G ++ + I T+ L + + G++ VGI Sbjct: 160 MGIYQAVAYSKELAASSFFG----ISLGQRSIILTIIATLLYVVQGYLSMVGI------- 208 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K M L P + F S P L +Y+ +I+I+QQ + Sbjct: 209 ---------PEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLI 255 >gi|218437889|ref|YP_002376218.1| inner membrane protein translocase component YidC [Cyanothece sp. PCC 7424] gi|218170617|gb|ACK69350.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 7424] Length = 381 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 10/128 (7%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ Q + M+ Q Sbjct: 1 MDFGVGFISTNIMLPILDFFYRIVPSYGFAIIALTLVIRFALYPLSAGQIRNMRKMRITQ 60 Query: 394 PKIDELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + E +E+ + ++ PQ Q+ M +L + NPLAGC P+L+Q+P+ FA++ Sbjct: 61 PLMKERQEEIQKRYKNDPQKQQEEMGKLMQEFG-NPLAGCLPLLVQMPILFALFAT---- 115 Query: 451 LEMRHAPF 458 +R +PF Sbjct: 116 --LRGSPF 121 >gi|167038671|ref|YP_001666249.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167041021|ref|YP_001664006.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter sp. X514] gi|300913768|ref|ZP_07131085.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter sp. X561] gi|307725546|ref|YP_003905297.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter sp. X513] gi|320117063|ref|YP_004187222.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855261|gb|ABY93670.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter sp. X514] gi|166857505|gb|ABY95913.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|300890453|gb|EFK85598.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter sp. X561] gi|307582607|gb|ADN56006.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter sp. X513] gi|319930154|gb|ADV80839.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 206 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + L+ + ++ VGN+GIAI++ T+ +++L P +Q + MK IQP + EL++ Sbjct: 4 IAVYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMNTMKKMKEIQPLVQELQK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + PQ L ++LY+ +NP GC P+LL + + + ++ ++ A F W Sbjct: 64 KYAKD-PQKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTASFL-W 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I LA D P+Y I PI+ +++ +I M DK Q + Sbjct: 122 IHSLAQKD-----------PYY--------IIPILAAVTTYISSAMV--ATDKSQNSMNI 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 161 MMSIFMGWITVSLPAGVGIYWVTSNIFQIVQQYIFMR 197 >gi|126700823|ref|YP_001089720.1| hypothetical protein CD3204 [Clostridium difficile 630] gi|115252260|emb|CAJ70101.1| putative membrane protein [Clostridium difficile] Length = 216 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI+ + L+S +N G+FGI+I+L T+ VKL+ PL+ KQ S + + K++ ++ Sbjct: 3 FISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEYIK 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH---AP 457 EK+K ++ + IQ+ ++ + GC +L+Q+PV +A+Y V L+M Sbjct: 63 EKYKNDTKEL--EKQIQVSSVESMKSMLGCLIVLVQMPVVYALYHV---CLDMTKEFTTI 117 Query: 458 FWGWIKDLAAADPTNIFTL 476 WI +L D N+F L Sbjct: 118 IIPWIANLGTFD--NLFIL 134 >gi|227529865|ref|ZP_03959914.1| stage III sporulation protein J precursor [Lactobacillus vaginalis ATCC 49540] gi|227350234|gb|EEJ40525.1| stage III sporulation protein J precursor [Lactobacillus vaginalis ATCC 49540] Length = 276 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 23/223 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N G +G+ I++ T+ +++L PL Q S + + PK+ Sbjct: 36 WDHYIVYNFSRFIIWLSNNCGGYGMGIIIFTIIIRVLLLPLMFYQTKSMLKTQELAPKLK 95 Query: 398 ELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++K+ + + Q+ +LYK +NP A P+++Q+P+ +A+Y+ I + E+R Sbjct: 96 AIQKKYSSRDRESMVKMQEETSKLYKEAGVNPWASMLPMIIQLPIMWALYQAIWRTPELR 155 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 H F W++ L DP + ILP F + W + M+ P Sbjct: 156 HGTF-LWLQ-LGHTDP------YYILPILAALFTFLSSW-----------LSMASMPERN 196 Query: 515 GQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + W MP++ F F + + +YW SN +VQ ++ Sbjct: 197 AMTSAMTWFMPIMVFFMALGFSSAITLYWVVSNAFQVVQTLLL 239 >gi|270293445|ref|ZP_06199653.1| SpoJ protein [Streptococcus sp. M143] gi|270278107|gb|EFA23956.1| SpoJ protein [Streptococcus sp. M143] Length = 270 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 96/197 (48%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I L+E++ L + M Sbjct: 53 SIGVGIILFTILIRTILLPVFQTQMVASRKMQEAQPRIKALQEQYPGRDMESRTKLDQEM 112 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++YK + + WPIL+Q+PV A+++ ++ ++ F W+ +L D + Sbjct: 113 RKVYKELGVKHSSSLWPILIQMPVLLALFQALTRVDFLKTGHFL-WV-NLGGVDTSF--- 167 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 ILP F + W + K P + M+ ++F+FA+SS P Sbjct: 168 ---ILPILAAVFTFLSSW---------LSNKALPERSGAMTGMMYGMPVLIFIFAISS-P 214 Query: 536 AGLIIYWSWSNVISIVQ 552 +G+ +YW+ SN ++Q Sbjct: 215 SGVALYWAVSNAYQVLQ 231 >gi|261209462|ref|ZP_05923825.1| inner membrane protein [Enterococcus faecium TC 6] gi|289566873|ref|ZP_06447281.1| OxaA-like protein precursor [Enterococcus faecium D344SRF] gi|260076590|gb|EEW64354.1| inner membrane protein [Enterococcus faecium TC 6] gi|289161322|gb|EFD09214.1| OxaA-like protein precursor [Enterococcus faecium D344SRF] Length = 316 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 35/235 (14%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + + PM ++Y N ++G A++ TV V+++ PL +KK + + M+ ++ Sbjct: 39 YRVLVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQVLK 98 Query: 394 PKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+++ ++K K + + Q A M Q+Y+ + ++ G C P+L+Q+P+F A+Y Sbjct: 99 PQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + +R + F+G DL + P+ + + L G++ +GI Sbjct: 159 RYTEGIRESSFYGI--DLGS--PSMVLVAIAGGAYLLQGYISTIGI-------------- 200 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ---QAVIMK 558 P K +L P + VF S PAG+ +YW V S +Q VIMK Sbjct: 201 --PEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVIMK 253 >gi|257890476|ref|ZP_05670129.1| inner membrane protein [Enterococcus faecium 1,231,410] gi|257826836|gb|EEV53462.1| inner membrane protein [Enterococcus faecium 1,231,410] Length = 316 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/226 (23%), Positives = 105/226 (46%), Gaps = 32/226 (14%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + + PM ++Y N ++G A++ TV V+++ PL +KK + + M+ ++ Sbjct: 39 YRVLVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALK 98 Query: 394 PKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+++ ++K K + + Q A M Q+Y+ + ++ G C P+L+Q+P+F A+Y Sbjct: 99 PQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + +R + F+ + P+ + + + + L G++ +GI Sbjct: 159 RYTEGIRESSFY----SIDLGSPSMVLVVIAGVAYLLQGYISTIGI-------------- 200 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K +L P + VF S PAG+ +YW V S +Q Sbjct: 201 --PEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQ 244 >gi|84497198|ref|ZP_00996020.1| putative inner membrane protein translocase component YidC [Janibacter sp. HTCC2649] gi|84382086|gb|EAP97968.1| putative inner membrane protein translocase component YidC [Janibacter sp. HTCC2649] Length = 335 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 57/252 (22%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPP---QVLQKAMI 416 ++I+ + ++ PL KQ ++ M+ IQP++ ++++K+K +S P Q + + + Sbjct: 41 ALSIIGLVLVMRAAMIPLFVKQINASRKMQMIQPELQKIQKKYKGKSDPESRQAMTQETM 100 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------------------SISLEMRHAP 457 LYK+ NP + C PIL+Q P FF +++V+ +++ + A Sbjct: 101 ALYKSEGTNPFSSCLPILVQSPFFFGLFRVLNGLKGISEGTKDPIGPITRTVAKQAESAT 160 Query: 458 FWG-WIKDL---AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI---QMKMSPP 510 +G + D A T + T+ I ++MS + F Q+ Sbjct: 161 LFGAQLSDKFIGAETTTTKVVTILLI---------------VLMSATTFTTQRQLMTKNM 205 Query: 511 PAD-------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ-AVIMKM--- 559 PA K Q +I+ MPVVF + +FP G+++YW +NV S+ QQ VI KM Sbjct: 206 PASALDNPFAKQQKLIMYVMPVVFAVSGINFPIGVLLYWFTTNVWSMTQQFYVIRKMPAP 265 Query: 560 -HGAEIGLIDRL 570 AE L +RL Sbjct: 266 GSAAERALHERL 277 >gi|166032896|ref|ZP_02235725.1| hypothetical protein DORFOR_02617 [Dorea formicigenerans ATCC 27755] gi|166027253|gb|EDR46010.1| hypothetical protein DORFOR_02617 [Dorea formicigenerans ATCC 27755] Length = 358 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 27/238 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQK 413 G GI+I+L T+ V L P+ Q S+ +QP++ +++K+K Q Q+ Sbjct: 46 GLVGISIILYTILVYTLMLPMTINQQRSSKMQAVVQPEVMAIQKKYKNKKDQASMLKQQE 105 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-SISLEM----RHAPFWGWIKDLAAA 468 + Q+Y + ++ + GC P+L+Q+P FA+Y VI SIS + A + I D+ Sbjct: 106 EIQQVYDKYGVSMMGGCLPLLIQMPFLFALYPVIYSISDYVPNITAQANKFLTIPDMTIT 165 Query: 469 DPTNIFTLF--GILPFYLPGFMHVG--IWPIIMSLSMFIQMKMSPP------PADKGQAM 518 P N+ ++ G Y + + + P++ + + ++ MK+S PADK Sbjct: 166 -PGNMLSMAKSGETMGYSAAALVITAILLPVLSAFTQYLNMKLSMAVNGSNRPADKDDPT 224 Query: 519 ILNW------MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 MP+ + + + P G+ IYW S ++ +VQQ I K H ++I + D + Sbjct: 225 AATMRTMNMTMPLFSLVMVFTLPTGIGIYWIVSAIVRMVQQVFINK-HLSKISVDDMI 281 >gi|184156317|ref|YP_001844657.1| hypothetical protein LAF_1841 [Lactobacillus fermentum IFO 3956] gi|183227661|dbj|BAG28177.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] gi|299783733|gb|ADJ41731.1| Putative uncharacterized protein [Lactobacillus fermentum CECT 5716] Length = 277 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 23/223 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N+ G +G+ I++ T+ ++++ P+ Q S + + P++ Sbjct: 37 WDHYIVYNCSRFIIWLSNIFGGYGMGIIIFTIIIRIIILPMMFYQTKSMMKTQELAPQLK 96 Query: 398 ELREKFKQSPPQVLQKAMIQ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++K+ + +Q+ I+ LYK +NP A P+L+Q+PV +A+Y+ I + +++ Sbjct: 97 ALQKKYSSKDRETMQQLQIEQQKLYKEAGVNPFASMLPLLIQLPVMWALYQAIWRTAQLK 156 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F W++ L DP + +LP F + W + M+ P Sbjct: 157 TGTFL-WLQ-LGHTDP------YFVLPILAAVFTFISSW-----------LSMASMPEKN 197 Query: 515 GQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + W MP++ F F A + +YW +N +VQ VI Sbjct: 198 SMTTTMTWVMPIMIFFMALQFSAAITLYWVVTNAFQVVQTLVI 240 >gi|320010617|gb|ADW05467.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces flavogriseus ATCC 33331] Length = 256 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 14/116 (12%) Query: 346 MFMLMSYFYNLVGNFG-------------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 M MS F +LVG AI+L T V+L PL++ + Sbjct: 1 MSAFMSAFASLVGALADLLQPLFQHASTAAAIVLFTALVRLAVHPLSRAAARGQKARTKL 60 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 QP+I ELR+K ++P + +QKA+++L+ ++PL+GC P LLQ+P FF +Y + S Sbjct: 61 QPQIAELRKKHSKNPDR-MQKALMELHAKEKVSPLSGCLPSLLQMPAFFLLYHLFS 115 >gi|116630436|ref|YP_819589.1| preprotein translocase subunit YidC [Lactobacillus gasseri ATCC 33323] gi|238853336|ref|ZP_04643716.1| membrane protein OxaA 1 [Lactobacillus gasseri 202-4] gi|311111578|ref|ZP_07712975.1| membrane protein OxaA 1 [Lactobacillus gasseri MV-22] gi|116096018|gb|ABJ61170.1| Preprotein translocase subunit YidC [Lactobacillus gasseri ATCC 33323] gi|238834024|gb|EEQ26281.1| membrane protein OxaA 1 [Lactobacillus gasseri 202-4] gi|311066732|gb|EFQ47072.1| membrane protein OxaA 1 [Lactobacillus gasseri MV-22] Length = 291 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 21/202 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ---SPPQVLQKAM 415 ++G AI++ T+ V+++ PL S A + +QP++D LR+K+ Q LQ+ Sbjct: 70 SYGWAIIIFTIIVRIILLPLNAISIKSMAKQQKVQPQMDALRKKYPGKDVESRQKLQEET 129 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +LYK INP GC P+L+Q+PV +A+Y+ I + ++++ F W+ DL DP Sbjct: 130 SKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTPQLQNGRFL-WM-DLGRPDP----- 182 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSF 534 + I+P F + S +I +P + G + + MP++ + Sbjct: 183 -YYIMPVLAAAFTFI---------STYISQMSTPQSSQNGMTKGMTYLMPLIIGVSAIGI 232 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 + + +YW SN+ +VQ ++ Sbjct: 233 QSAISLYWVISNLFQVVQTFIL 254 >gi|33863638|ref|NP_895198.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9313] gi|38502916|sp|Q7V610|OXAA_PROMM RecName: Full=Inner membrane protein oxaA gi|33635221|emb|CAE21546.1| Putative inner membrane protein; similar to 60 kDa inner membrane protein family [Prochlorococcus marinus str. MIT 9313] Length = 378 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 67/114 (58%), Gaps = 12/114 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI----DELREKFK 404 ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + DE++ ++ Sbjct: 13 ILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPAMKKRQDEIKSRYA 72 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + PQ Q+ + ++ K NPL+GC P+L+Q+P+ FA++ +R +PF Sbjct: 73 KD-PQKQQEELGKVMKEFG-NPLSGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|260662535|ref|ZP_05863430.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN] gi|260553226|gb|EEX26169.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN] Length = 259 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 23/223 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N+ G +G+ I++ T+ ++++ P+ Q S + + P++ Sbjct: 19 WDHYIVYNCSRFIIWLSNIFGGYGMGIIIFTIIIRIIILPMMFYQTKSMMKTQELAPQLK 78 Query: 398 ELREKFKQSPPQVLQKAMIQ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++K+ + +Q+ I+ LYK +NP A P+L+Q+PV +A+Y+ I + +++ Sbjct: 79 ALQKKYSSKDRETMQQLQIEQQKLYKEAGVNPFASMLPLLIQLPVMWALYQAIWRTAQLK 138 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F W++ L DP + +LP F + W + M+ P Sbjct: 139 TGTF-LWLQ-LGHTDP------YFVLPILAAVFTFISSW-----------LSMASMPEKN 179 Query: 515 GQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + W MP++ F F A + +YW +N +VQ VI Sbjct: 180 SMTTTMTWVMPIMIFFMALQFSAAITLYWVVTNAFQVVQTLVI 222 >gi|160944271|ref|ZP_02091500.1| hypothetical protein FAEPRAM212_01780 [Faecalibacterium prausnitzii M21/2] gi|158444453|gb|EDP21457.1| hypothetical protein FAEPRAM212_01780 [Faecalibacterium prausnitzii M21/2] Length = 357 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/279 (24%), Positives = 116/279 (41%), Gaps = 50/279 (17%) Query: 334 IDWG--WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D G +FY ++ P+ +M + Y L+ N+G I+L T+ + ++ PL Q S A M Sbjct: 1 MDKGMNFFYILSGPLGYVMEWIYKLLPNYGWDIILFTLLINIVKIPLQTSQQKSMAKMSA 60 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 QP I E++ K+K P + Q+ +++L + P AGC P+LL V + V+ L Sbjct: 61 FQPMIAEIQTKYKNKPEKQ-QEELMKLQQDFGYKPTAGCVPMLLNFLVMLGVIGVVYNPL 119 Query: 452 E----------------MRHA--PFWGWIKDL-----AAADPTNIFTLFGI--------- 479 E M A F +D A + + F + Sbjct: 120 ERIFHISAAALASAGEAMTAAGISFTAITRDTNIIAEVLAGNSGVLGCFSVEQIATITEF 179 Query: 480 ------LPFYLPGFMHVGI-----WPIIMSLSMF----IQMKMSPPPADKGQAMILNWMP 524 L L +G+ P++ ++MF I MK S + + MP Sbjct: 180 GQHMNFLGIDLTRIPKLGLSLDIVLPLLSVITMFLSTHISMKASGQQMQGSMKLTMYMMP 239 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++++F +FP +Y+ SN++ Q V+ K + E Sbjct: 240 LMYLFFCFTFPLAFSLYYVISNIVMTAQTQVMRKFYDPE 278 >gi|124022319|ref|YP_001016626.1| inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9303] gi|123962605|gb|ABM77361.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT 9303] Length = 377 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 67/114 (58%), Gaps = 12/114 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI----DELREKFK 404 ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + DE++ ++ Sbjct: 13 ILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPAMKKRQDEIKSRYA 72 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + PQ Q+ + ++ K NPL+GC P+L+Q+P+ FA++ +R +PF Sbjct: 73 KD-PQKQQEELGKVMKEFG-NPLSGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|294786223|ref|ZP_06751477.1| membrane protein OxaA [Parascardovia denticolens F0305] gi|315225756|ref|ZP_07867544.1| membrane protein OxaA [Parascardovia denticolens DSM 10105] gi|294485056|gb|EFG32690.1| membrane protein OxaA [Parascardovia denticolens F0305] gi|315119888|gb|EFT83020.1| membrane protein OxaA [Parascardovia denticolens DSM 10105] Length = 329 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 128/253 (50%), Gaps = 37/253 (14%) Query: 336 WGWFYFIAKPMFMLMSY----FYNLVGNFGIAIMLTTVFVKLLFFPLAK----------K 381 +GW Y I +P+ + M+Y F++++ N G+ +V + + K Sbjct: 8 FGWIYKILRPLEIAMTYIIKFFHDILTNIGLRGQQGIAWVISVMLLVVLVRLLILPLFIK 67 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGCWPILLQI 437 Q VS NM+ +QP++ +++ K+K ++AM +++Y+ +++NP C P L+Q Sbjct: 68 QMVSMRNMQAVQPQLQKIQNKYKGKTDPASREAMSRETMKIYQDNHVNPAGSCIPALIQS 127 Query: 438 PVFFAIYKVISISLEMR---HAPFWGWIK----DLAAADPTNIFTLFGILPFYLPGF-MH 489 PVF A++ +S+ + P + K + A A NI TL + PG + Sbjct: 128 PVFMAMFYTLSMVTYISNGARGPLGAFDKAVSTEFAQARVFNI-TLSSMFTTANPGGKIT 186 Query: 490 VGIWPIIMSLSMFIQM-----KMSPPPADKGQA----MILNWM-PVVFVFALSSFPAGLI 539 +GI+ +M +MF + P + +G++ M+++++ PV+++F+ +FP ++ Sbjct: 187 IGIFVALMCFTMFYSQWHNTRRNMPRASMQGRSYRTQMMMSFIFPVMYIFSGIAFPFAVL 246 Query: 540 IYWSWSNVISIVQ 552 +YW +N+ ++ Q Sbjct: 247 VYWLTNNIWTLGQ 259 >gi|295425290|ref|ZP_06817993.1| membrane protein chaperone OxaA [Lactobacillus amylolyticus DSM 11664] gi|295065066|gb|EFG55971.1| membrane protein chaperone OxaA [Lactobacillus amylolyticus DSM 11664] Length = 321 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 34/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +GW Y +I P+ +M N + G AI++ T+ V+ + PL KK Sbjct: 41 YGWVYTWIGIPLQNVMLKTANAIKGANGAGWAIVIITLVVRTILLPLMLVQQKKSVTQQE 100 Query: 388 NMKNIQPKIDELREKFKQ---SPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++E K +P Q +Q K +LY+ +N++ G C P+L+Q+P+ Sbjct: 101 KMARLQPQMKLIQEGMKHKPMTPEQQMQLSKWQRELYQKNNVSLTGGIGCLPLLIQMPIM 160 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY ++ S +R A F+G + + I T+F ++ Y+ +GI Sbjct: 161 MGIYSAVAYSSVLREASFFGISLNSKSLVLAIIATVFAVIQGYIS---LIGI-------- 209 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K ++ P++ +F SF L +YW+ N ++I+QQ ++ Sbjct: 210 --------PKEQKKTMQSMMFMNPIMTLFFSLSFSGALALYWAAGNFVTIIQQILV 257 >gi|300362682|ref|ZP_07058858.1| stage III sporulation protein J [Lactobacillus gasseri JV-V03] gi|300353673|gb|EFJ69545.1| stage III sporulation protein J [Lactobacillus gasseri JV-V03] Length = 291 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 21/202 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ---SPPQVLQKAM 415 ++G AI++ T+ V+++ PL S A + +QP++D LR+K+ Q LQ+ Sbjct: 70 SYGWAIIIFTIIVRIILLPLNAISIKSMAKQQKVQPQMDALRKKYPGKDVESRQKLQEET 129 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +LYK INP GC P+L+Q+PV +A+Y+ I + ++++ F W+ DL DP Sbjct: 130 SKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTPQLQNGRFL-WM-DLGRPDP----- 182 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSF 534 + I+P F + S +I +P + G + + MP++ + Sbjct: 183 -YYIMPVLAAAFTFI---------STYISQMSTPQSSQNGMTKGMTYLMPLIIGVSAIGI 232 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 + + +YW SN+ +VQ ++ Sbjct: 233 QSAISLYWVISNLFQVVQTFIL 254 >gi|256751458|ref|ZP_05492336.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter ethanolicus CCSD1] gi|256749677|gb|EEU62703.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter ethanolicus CCSD1] Length = 206 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + L+ + ++ VGN+GIAI++ T+ +++L P +Q + MK IQP + EL++ Sbjct: 4 IAVYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMNTMKKMKEIQPLVQELQK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + PQ L ++LY+ +NP GC P+LL + + + ++ ++ A F W Sbjct: 64 KYVKD-PQKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTASFL-W 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I LA D P+Y I PI+ +++ +I M DK Q + Sbjct: 122 IHSLAQKD-----------PYY--------IIPILAAVTTYISSAMV--ATDKSQNSMNI 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 161 MMSIFMGWITVSLPAGVGIYWVTSNIFQIVQQYIFMR 197 >gi|167755168|ref|ZP_02427295.1| hypothetical protein CLORAM_00673 [Clostridium ramosum DSM 1402] gi|237733408|ref|ZP_04563889.1| membrane protein [Mollicutes bacterium D7] gi|167705218|gb|EDS19797.1| hypothetical protein CLORAM_00673 [Clostridium ramosum DSM 1402] gi|229383443|gb|EEO33534.1| membrane protein [Coprobacillus sp. D7] Length = 298 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 119/236 (50%), Gaps = 17/236 (7%) Query: 335 DWGWFYFI-AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 D GWF FI P+ + + + VGN ++ T+ V ++ P+ K VST M+ +Q Sbjct: 51 DAGWFDFIFVIPLAKGILFINDYVGNVAFGVIGVTIIVNIITLPIMIKSTVSTQKMQLLQ 110 Query: 394 PKIDELREKF---KQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P++++++ K+ K Q+ Q A IQ LYK +N++ + G + L +P+ FA+++ + Sbjct: 111 PEMEKIQRKYKGRKDQASQMRQNAEIQNLYKKNNVS-MFGSFATFLTLPIMFAMWQAVQ- 168 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTL---FGILPFYLPG--FMHVGIWPIIMSLSMFIQ 504 +++ ++ + I +L A ++I L + +L + G F + I I+ S Sbjct: 169 RIDILYSTYIFGI-NLGAKPISHIMDLDIAYIVLLVLVAGTQFFAMQITQIMAKRS---- 223 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 K P K + N M + V+ ++ PA + +YW +NVI+I++ I H Sbjct: 224 PKYRPSQQMKSMNTMNNVMTIFIVYLAATMPAAMSLYWITTNVINIIRTVYIQLFH 279 >gi|300361213|ref|ZP_07057390.1| membrane protein OxaA 2 [Lactobacillus gasseri JV-V03] gi|300353832|gb|EFJ69703.1| membrane protein OxaA 2 [Lactobacillus gasseri JV-V03] Length = 327 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 36/236 (15%) Query: 336 WGW-FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL--AKKQYVSTANM 389 + W F KP+ +M + +G G AI++ T V+L+ PL A ++ ++T Sbjct: 40 YAWVFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 390 KN--IQPKIDELREKFKQ---SPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVF 440 K +QP++ ++E K+ + PQ +Q + +Q+ YK +N++ + G C P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKDNNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSL 499 IY+ ++ S E+ + F+G ++ + + T+ L + + G++ VGI Sbjct: 160 IGIYQAVAYSKELAASSFFG----ISLGQRSIVLTIIATLLYVIQGYLSMVGI------- 208 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K M L P + F S P L +Y+ +I+I+QQ + Sbjct: 209 ---------PEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQVI 255 >gi|308804920|ref|XP_003079772.1| putative cytochrome oxidase assembly protein (ISS) [Ostreococcus tauri] gi|116058229|emb|CAL53418.1| putative cytochrome oxidase assembly protein (ISS) [Ostreococcus tauri] Length = 337 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 31/233 (13%) Query: 350 MSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 M YF+ G + +AI+ TVF++ + FPL Q +TA M+ +P+++ L+ K K +P Sbjct: 79 MEYFHVAHGLEWWLAIVGATVFMRTVTFPLVVMQMRNTARMQLCKPELEALQAKMKSNPS 138 Query: 409 QVLQKA------MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI------SLEMRHA 456 Q + A M +++K +++NP P+L+ PVF + Y IS S E Sbjct: 139 QDPELATAYYAEMQKVWKKYDVNPFKSFAPVLINAPVFISFYFAISKMAAGVPSFETGGP 198 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + DL+ ADPT + L F + +G M S QMK Sbjct: 199 SMY---PDLSIADPTYSLPILSSLTFL--ASVELGTVE-GMQTSQSAQMK---------- 242 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-MKMHGAEIGLID 568 L + V V +SFP G+ +YW SN+ S VQ ++ K A +G+ D Sbjct: 243 -WFLRALAVAMVPLTASFPQGVFVYWITSNMFSGVQTSITRTKGFKAAMGIPD 294 >gi|289642462|ref|ZP_06474607.1| 60 kDa inner membrane insertion protein [Frankia symbiont of Datisca glomerata] gi|289507721|gb|EFD28675.1| 60 kDa inner membrane insertion protein [Frankia symbiont of Datisca glomerata] Length = 451 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 35/249 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +F+ P+F S+F + ++++L + V+++ FPL KQ + M+ +QPKI Sbjct: 15 FFHGGFGPIFGRDSFFA-----WALSVVLLVICVRIMIFPLFVKQVKAQRTMQLMQPKIK 69 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--------- 448 E+R+K+ Q+ K M +L K H NPL GC PILLQIP+F A++ V S Sbjct: 70 EIRDKYGHDRQQMNAKIM-ELQKEHG-NPLLGCLPILLQIPLFIALFHVFSHLRPVDRPG 127 Query: 449 --------ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP----II 496 + L + K L + T+ + L F +V I+ ++ Sbjct: 128 GVLEWAPRVGLTAQQVQQIAEAKLLGVSLSTSFTSSSNFLEFVQANGTNVKIFAVTLIVL 187 Query: 497 MSLSMFI---QMKMSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 M + F+ Q+ P D QA++ L P++ FP +++YW +N+ S Sbjct: 188 MGATTFLTQRQIMARTGPVDPQQAIVQKVLLYGSPIMLAVFGFQFPIAVLLYWLTTNLWS 247 Query: 550 IVQQAVIMK 558 + QQ ++K Sbjct: 248 MGQQFFVIK 256 >gi|16330836|ref|NP_441564.1| inner membrane protein translocase component YidC [Synechocystis sp. PCC 6803] gi|38502896|sp|P74155|OXAA_SYNY3 RecName: Full=Inner membrane protein oxaA gi|1653329|dbj|BAA18244.1| inner membrane protein [Synechocystis sp. PCC 6803] Length = 384 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 74/129 (57%), Gaps = 12/129 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +F+ +V ++G AI+ T+ ++L +PL+ Q + M+ Q Sbjct: 1 MDFGIGFISTNIMLPILDFFFGIVHSYGFAIIALTLVIRLGLYPLSAGQIRNMRKMRITQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P + +E+++++K P + Q+ M ++ K NPLAGC P+LLQ+P+ FA++ Sbjct: 61 PLMKERQEEIQKRYKDDPAKQ-QEEMAKVMKEFG-NPLAGCLPLLLQMPILFALFAT--- 115 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 116 ---LRGSPF 121 >gi|314934498|ref|ZP_07841857.1| SpoJ family protein [Staphylococcus caprae C87] gi|313652428|gb|EFS16191.1| SpoJ family protein [Staphylococcus caprae C87] Length = 273 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 33/242 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN--- 391 G+FY KPM L+ + L N+G+AI++ + V+ + PL Q + M+ Sbjct: 29 GFFYNLFVKPMDSLLHFLGRLFNDNYGLAIIVIVLIVRFILLPLMVIQVKNMHMMREKTN 88 Query: 392 -IQPKIDELREKFKQSPPQVLQKAMIQL----YKTHNINP---LAGCWPILLQIPVFFAI 443 ++P++D +REK K++ Q + A QL YK++ INP + GC+P+++QIP+ + Sbjct: 89 VVKPELDAIREKIKKADTQEERNAANQLLMKKYKSYGINPFKNMIGCFPVIIQIPILMGL 148 Query: 444 YKVIS--ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y + S + P + W +P I T+ ++ I P++ S+ Sbjct: 149 YMSLKYPTSDGITKYPHFLWFN---LTEPNLIMTIIAASMYF--------IQPLVNSIHY 197 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P K +I+ P+ +A + + L +YWS S IVQ + +G Sbjct: 198 -------PKDQRKTYYVIMVVSPIFITYASLTSASALGLYWSISAAFLIVQMHLAHSYYG 250 Query: 562 AE 563 + Sbjct: 251 KQ 252 >gi|223042607|ref|ZP_03612656.1| membrane protein OxaA 1 [Staphylococcus capitis SK14] gi|222444270|gb|EEE50366.1| membrane protein OxaA 1 [Staphylococcus capitis SK14] Length = 273 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 33/242 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN--- 391 G+FY KPM L+ + L N+G+AI++ + V+ + PL Q + M+ Sbjct: 29 GFFYNLFVKPMDSLLHFLGRLFNDNYGLAIIVIVLIVRFILLPLMVIQVKNMHMMREKTN 88 Query: 392 -IQPKIDELREKFKQSPPQVLQKAMIQL----YKTHNINP---LAGCWPILLQIPVFFAI 443 ++P++D +REK K++ Q + A QL YK++ INP + GC+P+++QIP+ + Sbjct: 89 VVKPELDAIREKIKKADTQEERNAANQLLMKKYKSYGINPFKNMIGCFPVIIQIPILMGL 148 Query: 444 YKVIS--ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y + S + P + W +P I T+ ++ I P++ S+ Sbjct: 149 YMSLKYPTSDGITKYPHFLWFN---LTEPNLIMTIIAASMYF--------IQPLVNSIHY 197 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P K +I+ P+ +A + + L +YWS S IVQ + +G Sbjct: 198 -------PKDQRKTYYVIMVVSPIFITYASLTSASALGLYWSISAAFLIVQMHLAHSYYG 250 Query: 562 AE 563 + Sbjct: 251 KQ 252 >gi|325678529|ref|ZP_08158140.1| putative stage III sporulation protein J [Ruminococcus albus 8] gi|324109748|gb|EGC03953.1| putative stage III sporulation protein J [Ruminococcus albus 8] Length = 466 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 1/109 (0%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F IA P+ +M Y + N+GIA+++ T +L+ FPL Q S A ++PK+DE Sbjct: 2 FDLIAIPLGWIMKGCYYVFKNYGIALLVFTFLTRLIMFPLNVNQQKSMAKNTMLKPKLDE 61 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 L K+ ++ Q LQ+ + LY +NP+A C P+++ + + FA+ VI Sbjct: 62 LERKYGKN-KQKLQEEQMALYNETGVNPMASCLPMIVMMLILFAMIPVI 109 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Query: 495 IIMSLSMFIQMKMSPPPAD-KGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ +S Q K +P A GQ A IL +MP+ ++ +P GL IYW +S++ S++Q Sbjct: 289 LVTVVSQHFQKKNNPDMAKMTGQNAFILYFMPLFSLWLTFKYPIGLGIYWCFSSLFSLIQ 348 Query: 553 QAVIMKMHGAE 563 ++ K++ E Sbjct: 349 TVILNKVYTPE 359 >gi|306834162|ref|ZP_07467282.1| membrane protein [Streptococcus bovis ATCC 700338] gi|304423735|gb|EFM26881.1| membrane protein [Streptococcus bovis ATCC 700338] Length = 306 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 40/253 (15%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQ 393 Y + +PM L+ YF N VG FG+AI+L T+ V+ + PL K Y S M ++ Sbjct: 39 YILGEPMAKLIQYFANNVGLGFGLAIILVTIIVRCIILPLGLYQSWKASYQSE-KMAYLK 97 Query: 394 PKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVI 447 P + + E+ + + Q Q ++ K + IN L GC P+L+Q+P F A+Y Sbjct: 98 PIFEPINERMRNATTQEEKLAAQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAA 157 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ-MK 506 + + + F G DL G + + +I L +F + Sbjct: 158 QYTQGVSESTFLGI--DL--------------------GTRSIPLTAVIAVLYLFQSWLS 195 Query: 507 MSPPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M ++ AM + MP++ VF S PA +++YW SI+QQ + M + + Sbjct: 196 MQGVAEEQRAAMKGTMYAMPLMMVFFGMSMPASVLLYWLVGGFFSIIQQLITMLIIKPK- 254 Query: 565 GLIDRLRSTFSKN 577 L ++ + F KN Sbjct: 255 -LRQKIAAEFEKN 266 >gi|76787291|ref|YP_329128.1| membrane protein oxaA [Streptococcus agalactiae A909] gi|77407082|ref|ZP_00784085.1| SpoIIIJ family protein [Streptococcus agalactiae H36B] gi|76562348|gb|ABA44932.1| membrane protein oxaA, putative [Streptococcus agalactiae A909] gi|77174313|gb|EAO77179.1| SpoIIIJ family protein [Streptococcus agalactiae H36B] Length = 271 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 25/199 (12%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV---LQKAM 415 + G+ I+L T+ ++ + PL Q S+ M+ IQP++ EL++K+ P L M Sbjct: 53 SIGLGIILFTLIIRAIMMPLYNMQMKSSQKMQEIQPRLKELQKKYPGKDPDSRLKLNDEM 112 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +YK +NP A P+L+Q+PV +A+++ ++ ++ F +L+ DP Sbjct: 113 QSMYKAEGVNPYASVLPLLIQLPVLWALFQALTRVSFLKVGTFLSL--ELSQPDP----- 165 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW--MPVVFVFALSS 533 + ILP F + W + +K A+ L MP++ + + Sbjct: 166 -YYILPVLAALFTFLSTW------------LTNKAAVEKNIALTLMTYVMPLIILVTSFN 212 Query: 534 FPAGLIIYWSWSNVISIVQ 552 F +G+++YW+ SN + Q Sbjct: 213 FASGVVLYWTVSNAFQVFQ 231 >gi|284052519|ref|ZP_06382729.1| putative inner membrane protein translocase component YidC [Arthrospira platensis str. Paraca] gi|291572001|dbj|BAI94273.1| putative inner membrane protein [Arthrospira platensis NIES-39] Length = 390 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 74/129 (57%), Gaps = 12/129 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + MK Q Sbjct: 1 MDFGIGFLSNNLMLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSIRNMRRMKVTQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P ++D++++ +K P + ++ M ++YK NPLAGC+P+LLQ+P+ FA++ Sbjct: 61 PLMKERVDKIQKLYKDDPVKQ-REEMSRVYKELG-NPLAGCFPLLLQMPILFALFAT--- 115 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 116 ---LRGSPF 121 >gi|256787512|ref|ZP_05525943.1| membrane protein [Streptomyces lividans TK24] gi|289771409|ref|ZP_06530787.1| membrane protein [Streptomyces lividans TK24] gi|289701608|gb|EFD69037.1| membrane protein [Streptomyces lividans TK24] Length = 237 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 1/87 (1%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T V+LL PL++ +QP+I ELR K ++P + LQ+A+++L+ Sbjct: 28 IILFTALVRLLVHPLSRAAARGQKARTRLQPRIAELRRKHAKNPEK-LQRAVLELHAEEK 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVISIS 450 ++PL+GC P L QIP FF +Y + S S Sbjct: 87 VSPLSGCLPSLCQIPAFFLLYHLFSSS 113 >gi|218248781|ref|YP_002374152.1| putative inner membrane protein translocase component YidC [Cyanothece sp. PCC 8801] gi|257061840|ref|YP_003139728.1| inner membrane protein translocase component YidC [Cyanothece sp. PCC 8802] gi|218169259|gb|ACK67996.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 8801] gi|256592006|gb|ACV02893.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 8802] Length = 379 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 12/129 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ Q + MK Q Sbjct: 1 MDFGVGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRFGLYPLSAGQIRNMRKMKITQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P + +E++ ++K P + Q+ M +L + NPLAGC P+LLQ+P+ FA++ Sbjct: 61 PLMKERQEEIQRRYKDDPAKQ-QEEMGKLMQEFG-NPLAGCLPLLLQMPILFALFAT--- 115 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 116 ---LRGSPF 121 >gi|315605512|ref|ZP_07880549.1| stage III sporulation protein J [Actinomyces sp. oral taxon 180 str. F0310] gi|315312779|gb|EFU60859.1| stage III sporulation protein J [Actinomyces sp. oral taxon 180 str. F0310] Length = 447 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 109/220 (49%), Gaps = 29/220 (13%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 ++I+L TV V++ PL KQ S+ M+ IQP++ +++EK+K Q ++ M++ Sbjct: 39 LSIVLLTVLVRIAIIPLFLKQIRSSRAMQAIQPEMRKIQEKYKGKKDQASRQKMMEETQA 98 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRHAPFWGWIKD----LAAADPT 471 L + H ++P A C P+L+Q+PV F +Y+ I S+ + G D L A+ + Sbjct: 99 LQRKHKVSPFASCLPMLVQMPVLFGMYRAIIAVSSIANGTYTYRGESTDHLGPLNASVSS 158 Query: 472 NIF--TLFGIL-------PFYLP-GFMHVGIWPIIMSLSMFIQMKMS---------PPPA 512 I T+FG+ F P ++M + F+ M+MS P Sbjct: 159 EIVNSTVFGVPLSHTLRDSFDQPMAVAVFVAAIVMMVVLQFVSMRMSFSRNMPDMGDNPM 218 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + Q ++ MP++F+F+ F G++IY ++V ++ Q Sbjct: 219 AQSQRSMMYVMPLMFIFSGVFFQMGVVIYTVTASVWALAQ 258 >gi|209527903|ref|ZP_03276391.1| 60 kDa inner membrane insertion protein [Arthrospira maxima CS-328] gi|209491658|gb|EDZ92025.1| 60 kDa inner membrane insertion protein [Arthrospira maxima CS-328] Length = 391 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 74/129 (57%), Gaps = 12/129 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + MK Q Sbjct: 1 MDFGIGFLSNNLMLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSIRNMRRMKVTQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P ++D++++ +K P + ++ M ++YK NPLAGC+P+LLQ+P+ FA++ Sbjct: 61 PLMKERVDKIQKLYKDDPVKQ-REEMSRVYKELG-NPLAGCFPLLLQMPILFALFAT--- 115 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 116 ---LRGSPF 121 >gi|239982031|ref|ZP_04704555.1| hypothetical protein SalbJ_21534 [Streptomyces albus J1074] gi|291453882|ref|ZP_06593272.1| preprotein translocase subunit YidC [Streptomyces albus J1074] gi|291356831|gb|EFE83733.1| preprotein translocase subunit YidC [Streptomyces albus J1074] Length = 250 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 2/95 (2%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L T FV+LL PL++ +QP++ LR+K+K++P + LQKA ++LY Sbjct: 30 AIVLFTAFVRLLVLPLSRAAARGQKARTRLQPQVVALRKKYKKNPER-LQKATLELYAAE 88 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ++P +G P L Q+P FF +Y + + S E+ AP Sbjct: 89 KVSPFSGILPSLCQLPAFFLMYHLFA-SAEIGGAP 122 >gi|168702122|ref|ZP_02734399.1| hypothetical protein GobsU_21520 [Gemmata obscuriglobus UQM 2246] Length = 845 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/264 (26%), Positives = 129/264 (48%), Gaps = 27/264 (10%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYF-IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 +I + D AI RF I W + M +L++ ++++G++ ++I++ TV V+L+ Sbjct: 481 SITDFRSDTAIGRFASFIFWTDLVIAMTNLMHILLAAIHSVLGHWALSIVMLTVCVRLVL 540 Query: 376 FPLAKKQYVSTANM----KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA--- 428 ++KQ + M K +QP+ ++L+EK+K + +L + NP A Sbjct: 541 MYPSRKQTAMSMKMMEVQKRLQPEFEKLQEKYKDD-FNTYNREKTRLMMANGANPFAMAG 599 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL---FGILPFYLP 485 GC + Q+PV +Y + S+ R F WI +LAA D +T + P + Sbjct: 600 GCLLLFAQMPVMMGLYFCLQESIFFRLDSFL-WIDNLAAPDMLKWWTEQIPYVSTPDDIG 658 Query: 486 GFMHVG----IWPII-MSLSMFIQMKMSPPPAD------KGQAMILNWMPVVFVFALSSF 534 F+++G + P++ + L +F Q KM PP D + ++ M VF + ++ Sbjct: 659 SFIYLGPYFNLLPLLAVGLMLFQQSKMMPPATDPQAEQQRMMMKLMMIMMAVFFYKVA-- 716 Query: 535 PAGLIIYWSWSNVISIVQQAVIMK 558 AGL +Y+ S +I+++ +I K Sbjct: 717 -AGLALYFIVSTAWAIIERQLIPK 739 >gi|21221301|ref|NP_627080.1| membrane protein [Streptomyces coelicolor A3(2)] gi|6689184|emb|CAB65581.1| putative membrane protein [Streptomyces coelicolor A3(2)] Length = 237 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 1/87 (1%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T V+LL PL++ +QP+I ELR K ++P + LQ+A+++L+ Sbjct: 28 IILFTALVRLLVHPLSRAAARGQKARTRLQPRIAELRRKHAKNPEK-LQRAVLELHAEEK 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVISIS 450 ++PL+GC P L QIP FF +Y + S S Sbjct: 87 VSPLSGCLPSLCQIPAFFLLYHLFSSS 113 >gi|257869607|ref|ZP_05649260.1| inner membrane protein [Enterococcus gallinarum EG2] gi|257803771|gb|EEV32593.1| inner membrane protein [Enterococcus gallinarum EG2] Length = 306 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 113/235 (48%), Gaps = 35/235 (14%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + F+ KP+ L++ N ++G AI+ T+ V+L+ PL +KK + + M+ ++ Sbjct: 36 YRFLVKPLGNLITMLVENFDWSYGWAIIAVTIVVRLIILPLGIHQSKKTMIQSEKMQFLK 95 Query: 394 PKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P++D + K++ + Q M ++Y +N++ G C P+L+Q+P+F A+Y Sbjct: 96 PQVDIAQANLKKATTREEQMQAQADMQKIYSENNVSMFGGIGCLPLLIQMPIFSALYFTA 155 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + ++++ F+G ++ P+ +F + + + G++ +GI Sbjct: 156 RYTQGIQNSEFFG----ISLGQPSFLFVAIAGISYLIQGYISTIGI-------------- 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ---QAVIMK 558 P K +L P++ VF S PAG+ +YW V S +Q VIMK Sbjct: 198 --PEEQKKTMKTMLIVSPLMIVFMSLSAPAGVTLYWVVGGVFSCLQTFITNVIMK 250 >gi|227530490|ref|ZP_03960539.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus vaginalis ATCC 49540] gi|227349595|gb|EEJ39886.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus vaginalis ATCC 49540] Length = 322 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/235 (27%), Positives = 114/235 (48%), Gaps = 35/235 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 +G Y ++AKPM LM + + +GN +G AI++ V V+ + P+ KK + M Sbjct: 32 YGLTYTYLAKPMQHLMEWLASHLGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKM 91 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 IQP + +L++K +++ Q A M+ +Y+ +N++ G C P+L+Q PVF A+ Sbjct: 92 AKIQPLLKDLQKKQREAKTPEEQAAVGAQMMAVYRENNVSLTGGIGCLPLLIQFPVFAAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMF 502 Y I S ++ HA F G +A P+ +F + + + + ++ VG+ Sbjct: 152 YAAIRYSPDLYHATFMG----IALGKPSILFAILSFVAYAVQSYLGLVGV---------- 197 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAVI 556 P K Q + WM F +S + AGL +Y+ + +I+Q +I Sbjct: 198 -------PEEQKKQMKMAIWMSPFMTFFISLTSSAGLGLYFFIGGLFAILQTLMI 245 >gi|297585523|ref|YP_003701303.1| YidC/Oxa1 family membrane protein insertase [Bacillus selenitireducens MLS10] gi|297143980|gb|ADI00738.1| membrane protein insertase, YidC/Oxa1 family [Bacillus selenitireducens MLS10] Length = 286 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 39/235 (16%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK---- 390 G+F +++ P L+++F +L G ++G +I++ TV ++ PL KQ + K Sbjct: 47 GFFNHYVIYPFSYLLTFFADLFGGSYGASIIMMTVLIRTGLMPLMLKQQRTQLGTKKKMI 106 Query: 391 NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 IQP+++ L+ K+K Q +Q+ M+ +Y H NPL GC P+L+Q+P+ Y Sbjct: 107 EIQPELEALKAKYKDKKEPEAQQEMQQEMMGIYTKHQFNPLTSMGCLPMLIQLPILIGFY 166 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + I + E+ F W L D I PI+ +L FIQ Sbjct: 167 QAIMRTEEIASQQFL-WF-SLGETDL---------------------ILPILAALVYFIQ 203 Query: 505 MKMS---PPPADKGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQQAV 555 ++S K Q + ++ V + S A L +YW+ + I Q V Sbjct: 204 FRISLFGMEETQKKQMAVFGYLTPVMMGGFSFMVSAALPLYWTIGGLFLIAQTLV 258 >gi|297199948|ref|ZP_06917345.1| membrane protein [Streptomyces sviceus ATCC 29083] gi|297147539|gb|EDY54451.2| membrane protein [Streptomyces sviceus ATCC 29083] Length = 237 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T FV+LL PL++ +QPKI ELR++ K P + LQKA++ L+ Sbjct: 28 IVLFTAFVRLLVHPLSRAAARGQKARTKLQPKIAELRKQHKDQPDK-LQKAVLALHAEEK 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVIS 448 ++PL+GC P L Q+P FF +Y + S Sbjct: 87 VSPLSGCLPGLFQLPAFFLLYHLFS 111 >gi|227889543|ref|ZP_04007348.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus johnsonii ATCC 33200] gi|227850021|gb|EEJ60107.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus johnsonii ATCC 33200] Length = 327 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 114/236 (48%), Gaps = 36/236 (15%) Query: 336 WGW-FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL--AKKQYVSTANM 389 + W F KP+ +M + +G G AI++ T V+L+ PL A ++ ++T Sbjct: 40 YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFAVQLIVMPLRLASQRKMTTQQE 99 Query: 390 KN--IQPKIDELREKFKQ---SPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVF 440 K +QP++ ++E K+ + PQ +Q + +Q+ YK +N++ + G C P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSL 499 IY+ ++ S E+ + F+G ++ + I T+ L + + G++ VGI Sbjct: 160 MGIYQAVAYSKELAASSFFG----ISLGQRSIILTIIATLLYVVQGYLSMVGI------- 208 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K M L P + F S P L +Y+ +I+I+QQ + Sbjct: 209 ---------PEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLI 255 >gi|290891476|ref|ZP_06554535.1| hypothetical protein AWRIB429_1925 [Oenococcus oeni AWRIB429] gi|290478918|gb|EFD87583.1| hypothetical protein AWRIB429_1925 [Oenococcus oeni AWRIB429] Length = 286 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 30/207 (14%) Query: 355 NLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK----QSPPQ 409 L GN +G I++ T+ ++ L PL S+ NM + P + +++ K+K + Sbjct: 61 KLCGNSYGFGIVIFTLLIRFLILPLMVYSISSSKNMAKVAPLVKKVQAKYKGKRDRDSMT 120 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 LQ+ +YK +NP A P+L+Q+PV +A+++ +S + ++ F+ W++ L + D Sbjct: 121 KLQEETSSIYKEAGVNPYASLLPVLIQLPVLWALFQSVSSTPALKTGSFF-WLQ-LGSPD 178 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF-- 527 P + PI+ +L FI MS K Q MP +F Sbjct: 179 PYFVL-------------------PILAALFTFISSWMSTASMGKDQPGFAKAMPYIFPF 219 Query: 528 --VFALSSFPAGLIIYWSWSNVISIVQ 552 +F+ + + L +YW +N +VQ Sbjct: 220 IILFSALAVSSALSLYWVATNAFQVVQ 246 >gi|325571080|ref|ZP_08146652.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus casseliflavus ATCC 12755] gi|325156165|gb|EGC68351.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus casseliflavus ATCC 12755] Length = 308 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 112/235 (47%), Gaps = 35/235 (14%) Query: 339 FYFIAKPMF-MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + F+ KP+ M+ N ++G AI+ T+ V+++ PL ++K + + M+ ++ Sbjct: 39 YRFLVKPLGDMITMLVENFNWSYGWAIIAVTIVVRVIILPLGIHQSRKTMIQSEKMQFLK 98 Query: 394 PKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P++D + K++ + Q M ++Y +N++ G C P+L+Q+P+F A+Y Sbjct: 99 PQVDIAQANLKKATTREEQMQAQAEMQKIYSENNVSMFGGIGCLPLLIQMPIFSALYFTA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + ++++ F+G ++ DP+ +F + + G++ +GI Sbjct: 159 RYTQGIQNSEFFG----VSLGDPSILFVAIAGISYLAQGYISTIGI-------------- 200 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ---QAVIMK 558 P K +L P++ VF S PAG+ +YW V S +Q VIMK Sbjct: 201 --PEEQKKTMKTMLIVSPLMIVFMSMSAPAGVTLYWVVGGVFSCIQTFITNVIMK 253 >gi|307710908|ref|ZP_07647334.1| membrane protein oxaA 1 [Streptococcus mitis SK321] gi|307617264|gb|EFN96438.1| membrane protein oxaA 1 [Streptococcus mitis SK321] Length = 274 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ L P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 57 SIGVGIILFTVLIRTLLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 116 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L D T Sbjct: 117 RKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGHFL-WI-NLGGVDTTL--- 171 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +LP F + W + K AM+ ++F+FA+ + P Sbjct: 172 ---VLPILAAVFTFLSTW---------LSNKALSERNGATTAMMYGIPVLIFIFAVYA-P 218 Query: 536 AGLIIYWSWSNVISIVQ 552 G+ +YW+ SN ++Q Sbjct: 219 GGVALYWTVSNAYQVLQ 235 >gi|239636059|ref|ZP_04677073.1| putative membrane protein [Staphylococcus warneri L37603] gi|239598330|gb|EEQ80813.1| putative membrane protein [Staphylococcus warneri L37603] Length = 270 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 34/244 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G FY +PM L+ F L N+G+AI+ + V+ + P K ++ K Sbjct: 28 GLFYNTFVQPMDRLLHLFGRLFNDNYGLAIIAIVLIVRFILLPFMLIQVKNMHIMREKTK 87 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQL----YKTHNINP---LAGCWPILLQIPVFFAI 443 +QP+ID++REK K++ Q + A QL YK + INP + GC P+++QIP+ + Sbjct: 88 VVQPQIDKIREKIKEADSQEERNAANQLLMNKYKQYGINPFKNIIGCLPVIIQIPILMGL 147 Query: 444 YKVISI--SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y + S + P + W +P + TL L ++ I P++ S+ Sbjct: 148 YMSLKYPSSDGITKYPRFLWFN---LTEPNIMMTLIAALMYF--------IQPLVNSIH- 195 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P K +++ P+ +A + L +YWS S I+Q + H Sbjct: 196 ------YPKDERKTYYVMMILSPIFITYASLHSASALGLYWSVSAAFLIIQMHFAHR-HY 248 Query: 562 AEIG 565 A++G Sbjct: 249 AKVG 252 >gi|282851875|ref|ZP_06261237.1| putative stage III sporulation protein J [Lactobacillus gasseri 224-1] gi|282556982|gb|EFB62582.1| putative stage III sporulation protein J [Lactobacillus gasseri 224-1] Length = 256 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 21/202 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ---SPPQVLQKAM 415 ++G AI++ T+ V+++ PL S A + +QP++D LR+K+ Q LQ+ Sbjct: 70 SYGWAIIIFTIIVRIILLPLNAISIKSMAKQQKVQPQMDALRKKYPGKDVESRQKLQEET 129 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +LYK INP GC P+L+Q+PV +A+Y+ I + ++++ F W+ DL DP Sbjct: 130 SKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTPQLQNGRFL-WM-DLGRPDP----- 182 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSF 534 + I+P F + S +I +P + G + + MP++ + Sbjct: 183 -YYIMPVLAAAFTFI---------STYISQMSTPQSSQNGMTKGMTYLMPLIIGVSAIGI 232 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 + + +YW SN+ +VQ ++ Sbjct: 233 QSAISLYWVISNLFQVVQTFIL 254 >gi|312867510|ref|ZP_07727718.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parasanguinis F0405] gi|311096916|gb|EFQ55152.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parasanguinis F0405] Length = 293 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 33/224 (14%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF A+ + F + G+ G+ I++ T+ ++ + PL + Q ST M+ IQ Sbjct: 33 GWERFVYFFAEAI-----RFLSFGGSIGVGIIVFTIVIRTVLLPLFQYQMNSTRKMQEIQ 87 Query: 394 PKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + EL+ K+ L + M LYK + + P+L+Q+PV A+++ +S Sbjct: 88 PLLKELQAKYPGKDLDSRTKLSEEMRALYKEKGVKTSSAFLPLLIQMPVLMALFQALS-R 146 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E + W+ DL A DPT ILP F W + Sbjct: 147 VEFLKVGHFLWL-DLGAIDPTY------ILPVLAALFTFFSSW-----------LTNKAM 188 Query: 511 PADKGQAMILNW-MPV-VFVFALSSFPAGLIIYWSWSNVISIVQ 552 P G A + + MPV +F FAL S +G+ +YW SN + Q Sbjct: 189 PERNGSATTMMYVMPVMIFFFALFS-ASGVALYWVTSNAYQVGQ 231 >gi|329937988|ref|ZP_08287470.1| membrane protein [Streptomyces griseoaurantiacus M045] gi|329302945|gb|EGG46834.1| membrane protein [Streptomyces griseoaurantiacus M045] Length = 248 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 1/88 (1%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L T V+LL PL++ ++P+I ELRE+ + P + LQ+A+++L+ Sbjct: 27 AIVLFTALVRLLVHPLSRAAARGQKAGAALRPRIAELRERHRDDPRK-LQEAVLELHARE 85 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISIS 450 ++PL GC P LLQ P F +Y + S S Sbjct: 86 RVSPLGGCLPSLLQAPAFLLLYHLFSSS 113 >gi|300742660|ref|ZP_07072681.1| putative 60Kd inner membrane family protein [Rothia dentocariosa M567] gi|300381845|gb|EFJ78407.1| putative 60Kd inner membrane family protein [Rothia dentocariosa M567] Length = 337 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 30/219 (13%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 + I+ T+ ++ L PL KQ + M +Q + +L+ K+K Q+ ++AM Q Sbjct: 36 LCIICLTLVMRTLTIPLFVKQIKAMRGMNAMQGDLAKLQAKYKGKKDQLSRQAMAQEQMA 95 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT-- 475 LYK H NP A C PI+ Q+P+FF +Y+V+ + + A G + L A+ F+ Sbjct: 96 LYKKHGTNPFASCLPIIAQMPIFFGLYQVL-MGISGAAAKNEGIL--LLPAELVKQFSEA 152 Query: 476 -LFGILPFYL---PG---FMHVGIWPIIMSLSM-----FIQMKMSPP---------PADK 514 +FG F PG IIM L M FIQ ++S P + Sbjct: 153 HIFGAPIFSTMMNPGNGNHAATVAQAIIMILLMSGTQFFIQKQLSAKNMSEAAKNSPIFR 212 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 Q M++ P++F +FP G++ YW+ SN ++ QQ Sbjct: 213 QQQMMMYIFPIIFAVTGINFPLGVMYYWTVSNFWALGQQ 251 >gi|116333652|ref|YP_795179.1| preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367] gi|116098999|gb|ABJ64148.1| Preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367] Length = 300 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 31/233 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQY----VSTANM 389 +G+ Y ++A P +M + ++ G ++G AI++ TV V+++ P+ +Q V + Sbjct: 32 YGFVYDYLAVPGQHVMDWLAHIFGGSYGWAIIILTVIVRMVLLPIMVRQMRSATVQQEKI 91 Query: 390 KNIQPKIDELR--EKFKQSPP--QVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 I+P++ L+ +K ++P Q +AM+ LY+ + I+ G C P+L+Q+P+F A+ Sbjct: 92 SMIRPQMTALQKQQKAAKTPEEQQAASQAMMALYRNNGISMTGGIGCLPLLIQMPIFAAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ + F G + + I L L + L G++ + L M Sbjct: 152 YAAIRYSPELSNTVFLG----IPLGKSSWILALLSFLSYLLQGYLSM--------LGM-- 197 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K M L PV+ +F S PAGL +Y+ + + +Q +I Sbjct: 198 -----PEDQKKQMRMTLLLSPVMILFFTMSSPAGLGLYFFVGGLFACLQTLII 245 >gi|330685212|gb|EGG96875.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU121] Length = 270 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 34/244 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G FY +PM L+ F L N+G+AI+ + V+ + P K ++ K Sbjct: 28 GLFYNTFVQPMDRLLHLFGRLFNYNYGLAIIAIVLIVRFILLPFMLIQVKNMHIMREKTK 87 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQL----YKTHNINP---LAGCWPILLQIPVFFAI 443 +QP+ID++REK K++ Q + A QL YK + INP + GC+P+++QIP+ + Sbjct: 88 VVQPQIDKIREKIKEADSQEERNAANQLLMKKYKQYGINPFKNIIGCFPVIIQIPILMGL 147 Query: 444 YKVISI--SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y + S + P + W +P + TL L YL I P++ S+ Sbjct: 148 YMSLKYPSSDGITKYPHFLWFN---LTEPNIMMTLIAAL-MYL-------IQPLVNSIH- 195 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P K +++ P+ +A + L +YWS S I+Q + H Sbjct: 196 ------YPKNERKTYYVMMILSPIFITYASLHSASALGLYWSLSAAFLIIQMHFAHR-HY 248 Query: 562 AEIG 565 A++G Sbjct: 249 AKVG 252 >gi|320547570|ref|ZP_08041855.1| ParB/SpoJ family partitioning protein [Streptococcus equinus ATCC 9812] gi|320447645|gb|EFW88403.1| ParB/SpoJ family partitioning protein [Streptococcus equinus ATCC 9812] Length = 271 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 29/226 (12%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF AK + L ++ G G+ I+L T+ ++ + PL Q S+ M+++Q Sbjct: 33 GWEQIVYFFAKAIQWL-----SINGRIGVGIILFTIIIRAILMPLFNMQIKSSQKMQDLQ 87 Query: 394 PKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ +L+EK+ L + LYK + +NP A P+++Q+P+ A+Y+ ++ Sbjct: 88 PELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVIQLPILMALYQALTRV 147 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 ++ F WI +L+ DP + ILP F + W LS + Sbjct: 148 AFLKTGTFL-WI-ELSQPDP------YYILPVLAAFFTFLSTW-----LS-----NKAAR 189 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + M+ MP++ F +G+++YWS S + Q V+ Sbjct: 190 EKNMAMTMMTYVMPIMIFFLAFRLASGVVLYWSVSYAFQVFQVLVL 235 >gi|87303020|ref|ZP_01085824.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 5701] gi|87282516|gb|EAQ74475.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 5701] Length = 378 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 10/113 (8%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ--- 405 ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + + + + K Sbjct: 13 ILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEIKSRYA 72 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 S PQ Q+ + +L K +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 73 SNPQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|150018481|ref|YP_001310735.1| 60 kDa inner membrane insertion protein [Clostridium beijerinckii NCIMB 8052] gi|149904946|gb|ABR35779.1| 60 kDa inner membrane insertion protein [Clostridium beijerinckii NCIMB 8052] Length = 214 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 22/221 (9%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 ++YF+N+ G+ GIAI+L T+ VKL+ P++ KQ +S + + ++E++EK+K + + Sbjct: 12 LNYFFNITGDLGIAIILLTILVKLILMPISFKQKLSMYSQQEFSKGLEEIKEKYKSNKEK 71 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR-HAPFWGWIKDLAAA 468 + + Q Y N + G LLQIP+ F +Y+VI +++ M+ W+ L + Sbjct: 72 L--EIETQKYFKQNARGMIGILSSLLQIPIVFNLYRVI-LNMPMQVGTALIPWVVSLKMS 128 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 D +LF + Y + I P I L + Q K+S N + + Sbjct: 129 D-----SLFIVPAIYAVSMLSPNILPYIPFLRLKAQAKLSKT----------NIIITTII 173 Query: 529 FALSSF--PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 L +F P L IY+ +++ S V++ V +++ GL+ Sbjct: 174 SGLVTFKAPIALGIYFITTSLFSFVEE-VAFRLYAKRRGLV 213 >gi|25010517|ref|NP_734912.1| hypothetical protein gbs0444 [Streptococcus agalactiae NEM316] gi|77414752|ref|ZP_00790879.1| SpoIIIJ family protein [Streptococcus agalactiae 515] gi|38503014|sp|Q8E6W4|OXAA1_STRA3 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|23094870|emb|CAD46088.1| Unknown [Streptococcus agalactiae NEM316] gi|77159202|gb|EAO70386.1| SpoIIIJ family protein [Streptococcus agalactiae 515] gi|319744392|gb|EFV96751.1| ParB/SpoJ family partitioning protein [Streptococcus agalactiae ATCC 13813] Length = 271 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 25/199 (12%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV---LQKAM 415 + G+ I+L T+ ++ + PL Q S+ M+ IQP++ EL++K+ P L M Sbjct: 53 SIGLGIILFTLIIRAIMMPLYNMQMKSSQKMQEIQPRLKELQKKYPGKDPDSRLKLNDEM 112 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +YK +NP A P+L+Q+PV +A+++ ++ ++ F +L+ DP Sbjct: 113 QSMYKAEGVNPYASVLPLLIQLPVLWALFQALTRVSFLKVGTFLSL--ELSQPDP----- 165 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW--MPVVFVFALSS 533 + ILP F + W + +K A+ L MP + + + Sbjct: 166 -YYILPVLAALFTFLSTW------------LTNKAAVEKNIALTLMTYVMPFIILVTSFN 212 Query: 534 FPAGLIIYWSWSNVISIVQ 552 F +G+++YW+ SN + Q Sbjct: 213 FASGVVLYWTVSNAFQVFQ 231 >gi|227876537|ref|ZP_03994648.1| inner membrane protein translocase component YidC [Mobiluncus mulieris ATCC 35243] gi|227842851|gb|EEJ53049.1| inner membrane protein translocase component YidC [Mobiluncus mulieris ATCC 35243] Length = 445 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 32/227 (14%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQ 417 ++I+ TVFV+LL PL KQ +T M QP++ +++K+K Q +Q+ Sbjct: 54 LSIVGLTVFVRLLLVPLFVKQIKATRAMSLAQPEMSAIQKKYKGKRDQQSMIRMQEETRA 113 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVI---------------SI-------SLEMRH 455 + + + + A C PIL Q+PVFFA+Y+++ SI + ++ H Sbjct: 114 VQRKYGASMSASCLPILFQMPVFFALYRLLYNMKPIADGVLPGHDSIGGMGQVQAQDLWH 173 Query: 456 APFWGWIKDLAAADPTNIFT---LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPP 511 + F+G L P ++ + + GI+ YL + + +++ Q ++ S P Sbjct: 174 STFFGQSLGLTMFGPGSVMSTKIVVGIMVAYL--VLSMLFQTAFLTMKNMSQEQLNSDNP 231 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K ++ MP++++F GL++YW SN I+QQ IM+ Sbjct: 232 MVKSTKSMMYLMPLMYLFTGPVVQVGLLVYWVTSNTWMILQQFFIMR 278 >gi|254423008|ref|ZP_05036726.1| 60Kd inner membrane protein [Synechococcus sp. PCC 7335] gi|196190497|gb|EDX85461.1| 60Kd inner membrane protein [Synechococcus sp. PCC 7335] Length = 434 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 71/129 (55%), Gaps = 12/129 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + MK Sbjct: 1 MDFGIGFLSNNVMLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSIRNMRKMKIAN 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P ++ E++E++K P V Q+ I+ + NPLAGC+P++LQ+P+ FA++ Sbjct: 61 PLMQKRMAEVKERYKDDP--VKQQEEIKDIYSEFGNPLAGCFPVVLQMPILFALFAT--- 115 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 116 ---LRGSPF 121 >gi|42519904|ref|NP_965834.1| stage III sporulation protein J precursor [Lactobacillus johnsonii NCC 533] gi|227889159|ref|ZP_04006964.1| membrane protein chaperone oxaA [Lactobacillus johnsonii ATCC 33200] gi|41584194|gb|AAS09800.1| stage III sporulation protein J precursor [Lactobacillus johnsonii NCC 533] gi|227850388|gb|EEJ60474.1| membrane protein chaperone oxaA [Lactobacillus johnsonii ATCC 33200] Length = 291 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 111/221 (50%), Gaps = 24/221 (10%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y+I++ + + S ++ ++G AI++ T+ V+++ PL S A + +QP++D L Sbjct: 54 YYISQFILWIASLVHD---SYGWAIIIFTIIVRIILLPLNAISIRSMAKQQKVQPQMDAL 110 Query: 400 REKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 R+K+ Q LQ+ +LYK INP GC P+L+Q+PV +A+Y+ I + ++++ Sbjct: 111 RKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTPQLQNG 170 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 F W+ DL DP + I+P F +S +I +P + G Sbjct: 171 RFL-WM-DLGRPDP------YYIMPILAAVFTF---------MSTYISQMSTPQSSQNGM 213 Query: 517 AMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + + MP++ + + + +YW SN+ +VQ ++ Sbjct: 214 TKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFIL 254 >gi|22536592|ref|NP_687443.1| SpoIIIJ family protein [Streptococcus agalactiae 2603V/R] gi|76799479|ref|ZP_00781620.1| Membrane protein oxaA 1 precursor [Streptococcus agalactiae 18RS21] gi|77412336|ref|ZP_00788649.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111] gi|38502994|sp|Q8CX16|OXAA1_STRA5 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|22533428|gb|AAM99315.1|AE014210_5 SpoIIIJ family protein [Streptococcus agalactiae 2603V/R] gi|76585169|gb|EAO61786.1| Membrane protein oxaA 1 precursor [Streptococcus agalactiae 18RS21] gi|77161625|gb|EAO72623.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111] Length = 271 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 25/199 (12%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQKAM 415 + G+ I+L T+ ++ + PL Q S+ M+ IQP++ EL++K+ P L M Sbjct: 53 SIGLGIILFTLIIRAIMMPLYNMQMKSSQKMQEIQPRLKELQKKYPGKDPDNRLKLNDEM 112 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +YK +NP A P+L+Q+PV +A+++ ++ ++ F +L+ DP Sbjct: 113 QSMYKAEGVNPYASVLPLLIQLPVLWALFQALTRVSFLKVGTFLSL--ELSQPDP----- 165 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW--MPVVFVFALSS 533 + ILP F + W + +K A+ L MP + + + Sbjct: 166 -YYILPVLAALFTFLSTW------------LTNKAAVEKNIALTLMTYVMPFIILVTSFN 212 Query: 534 FPAGLIIYWSWSNVISIVQ 552 F +G+++YW+ SN + Q Sbjct: 213 FASGVVLYWTVSNAFQVFQ 231 >gi|262066864|ref|ZP_06026476.1| stage III sporulation protein J [Fusobacterium periodonticum ATCC 33693] gi|291379415|gb|EFE86933.1| stage III sporulation protein J [Fusobacterium periodonticum ATCC 33693] Length = 206 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 118/226 (52%), Gaps = 40/226 (17%) Query: 350 MSYFYNL---------------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 MSY YNL VGNFG++I++ T+ +K+ PL KQ S MK +QP Sbjct: 1 MSYLYNLLKQFLALLLTNTDKYVGNFGVSIIIVTILIKIALLPLTLKQDKSMKEMKKLQP 60 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +ID+++EK+ Q+L ++LYK H +NPL GC P+LLQ+P+ FA++ V+ + Sbjct: 61 EIDKIKEKYAND-KQMLNIKTMELYKEHKVNPLGGCLPLLLQLPILFALFGVLRSGIIPA 119 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + F W+K L+ D PFY I P++ F+Q K+ AD Sbjct: 120 DSSFL-WLK-LSEPD-----------PFY--------ILPVLNGAVSFLQQKLM-GSADS 157 Query: 515 GQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M ++ P++ + P+GL +YW S+++++VQQ IMK Sbjct: 158 NPQMKNMMYIFPIMMIMISYKMPSGLQVYWLTSSILAVVQQYFIMK 203 >gi|295398138|ref|ZP_06808187.1| stage III sporulation protein J [Aerococcus viridans ATCC 11563] gi|294973657|gb|EFG49435.1| stage III sporulation protein J [Aerococcus viridans ATCC 11563] Length = 277 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 29/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I ++ + ++ GN+G+ I+ T+ ++++ PL K Q ST M+ +QP++ Sbjct: 38 WDRYIVYNFSRIIVWLSDIFGNYGVGIIAFTLIIRIILIPLTKYQTQSTEKMQMMQPELK 97 Query: 398 ELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L+EK+ P Q LQ+ +L + ++ + +GC P+L+Q+P+ A+Y+ IS + + Sbjct: 98 ALQEKYASKDPETQQKLQEETAKLNEKYDYSMWSGCLPMLIQLPILMALYQSISRTEILS 157 Query: 455 HAPF-WGWIKDLAAADPTNIFT---LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 F W L P +F + IL +Y +G P Sbjct: 158 QGHFLW-----LELGVPDQLFVIPIIAAILTWYNTRLTTIGT-----------------P 195 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ AM+ MPV+ +F + P+ + +YW S +I+Q V+ Sbjct: 196 NSNPSMAMMQWTMPVMILFMGVTLPSAISLYWVASTGFTILQTLVM 241 >gi|329668161|gb|AEB94109.1| stage III sporulation protein J precursor [Lactobacillus johnsonii DPC 6026] Length = 273 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 109/217 (50%), Gaps = 24/217 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y+I++ + + S ++ ++G AI++ T+ V+++ PL S A + +QP++D L Sbjct: 36 YYISQFILWIASLVHD---SYGWAIIIFTIIVRIILLPLNAISIRSMAKQQKVQPQMDAL 92 Query: 400 REKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 R+K+ Q LQ+ +LYK INP GC P+L+Q+PV +A+Y+ I + ++++ Sbjct: 93 RKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTPQLQNG 152 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 F W+ DL DP + I+P F +S +I +P + G Sbjct: 153 RFL-WM-DLGRPDP------YYIMPILAAVFTF---------MSTYISQMSTPQSSQNGM 195 Query: 517 AMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + MP++ + + + +YW SN+ +VQ Sbjct: 196 TKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQ 232 >gi|317130857|ref|YP_004097139.1| membrane protein insertase, YidC/Oxa1 family [Bacillus cellulosilyticus DSM 2522] gi|315475805|gb|ADU32408.1| membrane protein insertase, YidC/Oxa1 family [Bacillus cellulosilyticus DSM 2522] Length = 274 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 49/238 (20%) Query: 337 GWF-YFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQY----VSTANMK 390 G+F +++ P L+ +F + GN+G +I+L T+ +++ PL KQY V M Sbjct: 42 GFFNHYVVYPFSYLIKFFAAMFNGNYGASIILMTILLRMALMPLMLKQYKNQIVMKEKMS 101 Query: 391 NIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 IQP++ ++ E++K Q + Q+ ++ +Y+ HN NP+A GC P+++Q+P+ Y Sbjct: 102 VIQPEMQKINEQYKDKKDQESQRKKQQELMAVYQKHNFNPIASMGCLPMIIQLPILMGFY 161 Query: 445 KVISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 I + E+ H+ W +L D ILPF L F++ F+ Sbjct: 162 WAIMRTPEIASHSFLWF---NLGETDL--------ILPF-LAAFVY------------FV 197 Query: 504 QMKMS-----PPPADKGQAMILNWM-PV---VFVFALSSFPAGLIIYWSWSNVISIVQ 552 Q K+S P P + ++ ++ PV VF F ++ A L +YW+ + I Q Sbjct: 198 QFKVSQIGVIPQPGQENMMKMMGFITPVMMGVFSFGMA---AALPLYWTIGGLFLIFQ 252 >gi|118587491|ref|ZP_01544916.1| conserved hypothetical protein [Oenococcus oeni ATCC BAA-1163] gi|118432141|gb|EAV38882.1| conserved hypothetical protein [Oenococcus oeni ATCC BAA-1163] Length = 286 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 30/207 (14%) Query: 355 NLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---- 409 L GN +G I++ T+ ++ L PL S+ NM + P + +++ K+K + Sbjct: 61 KLCGNSYGFGIVIFTLLIRFLILPLMVYSISSSKNMAKVAPLVKKVQAKYKGKRDRDSMT 120 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 LQ+ +YK +NP A P+L+Q+PV +A+++ +S + ++ F+ W + L + D Sbjct: 121 KLQEETSSIYKEAGVNPYASLLPVLIQLPVLWALFQSVSSTPALKTGSFF-WFQ-LGSPD 178 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF-- 527 P + PI+ +L FI MS K Q MP +F Sbjct: 179 PYFVL-------------------PILAALFTFISSWMSTASMGKDQPGFAKAMPYIFPF 219 Query: 528 --VFALSSFPAGLIIYWSWSNVISIVQ 552 +F+ + + L +YW +N +VQ Sbjct: 220 IILFSALAVSSALSLYWVATNAFQVVQ 246 >gi|116491815|ref|YP_811359.1| preprotein translocase subunit YidC [Oenococcus oeni PSU-1] gi|116092540|gb|ABJ57694.1| Preprotein translocase subunit YidC [Oenococcus oeni PSU-1] Length = 286 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 30/207 (14%) Query: 355 NLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---- 409 L GN +G I++ T+ ++ L PL S+ NM + P + +++ K+K + Sbjct: 61 KLCGNSYGFGIVIFTLLIRFLILPLMVYSISSSKNMAKVAPLVKKVQAKYKGKRDRDSMT 120 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 LQ+ +YK +NP A P+L+Q+PV +A+++ +S + ++ F+ W++ L + D Sbjct: 121 KLQEETSSIYKEAGVNPYASLLPVLIQLPVLWALFQSVSSTPALKTGSFF-WLQ-LGSPD 178 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF-- 527 P + PI +L FI MS K Q MP +F Sbjct: 179 PYFVL-------------------PIFAALFTFISSWMSTASMGKDQPGFAKAMPYIFPF 219 Query: 528 --VFALSSFPAGLIIYWSWSNVISIVQ 552 +F+ + + L +YW +N +VQ Sbjct: 220 IILFSALAVSSALSLYWVATNAFQVVQ 246 >gi|229816993|ref|ZP_04447275.1| hypothetical protein BIFANG_02248 [Bifidobacterium angulatum DSM 20098] gi|229785738|gb|EEP21852.1| hypothetical protein BIFANG_02248 [Bifidobacterium angulatum DSM 20098] Length = 347 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 47/263 (17%) Query: 336 WGWFYFIAKP----MFMLMSYFYNLVGNFG---------IAIMLTTVFVKLLFFPL---- 378 WGW Y + P M +M+ F+ + G ++I+ + V++ FPL Sbjct: 14 WGWLYKLLYPVEWLMTQIMAVFHKFLVMLGMNEIGFSWVLSIVFLVIVVQICVFPLFYKS 73 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGC---W 431 K A+M+ +QPK+ ++ K+K + + +Q+ ++LY+ NP+ GC Sbjct: 74 IKGMRKMQADMQVLQPKLKRIQNKYKGKNDPASKEAMQRETMKLYQDTGTNPMGGCTSML 133 Query: 432 PILLQIPVFFAIYKVISI-----SLEMRHAPFWGWIKDLAAADPTNIFTLFGI------L 480 P+ +Q PVF ++ +S + R G D+A A T+FG+ Sbjct: 134 PMFVQGPVFMCMFYTLSAIPYIARGKFRDGQGLGAF-DIATAKEFTSTTVFGVNVADNFT 192 Query: 481 PFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPP-------ADKGQAMILNWMPVVFVF 529 + G + +GI+ +M + F MK + P A+ Q M+L P++++F Sbjct: 193 TATVSGKIVIGIFVALMCFCLWLMQFNSMKRNMPQNNAQNKQAEMMQKMMLWVFPIMYIF 252 Query: 530 ALSSFPAGLIIYWSWSNVISIVQ 552 + + P +++YW +NV ++++ Sbjct: 253 SGIAMPFAVLVYWLTNNVCNLLR 275 >gi|225570322|ref|ZP_03779347.1| hypothetical protein CLOHYLEM_06419 [Clostridium hylemonae DSM 15053] gi|225160854|gb|EEG73473.1| hypothetical protein CLOHYLEM_06419 [Clostridium hylemonae DSM 15053] Length = 356 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 40/245 (16%) Query: 349 LMSYFYNLVGNF--------GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI-QPKIDEL 399 +M++ Y ++ N G++I+ T+ V + PL KQ TA M ++ P+I + Sbjct: 25 VMNFIYTVLDNILPSDNGLIGLSIIFYTIIVYTIMLPLTVKQQ-KTAKMSSVMNPEIQAI 83 Query: 400 REKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------- 447 ++K+K Q Q+ + Q+Y + + GC P+L+Q+P+ FA+Y VI Sbjct: 84 QKKYKNKKDQASMMKQQEEVQQVYDKYGTSMTGGCLPLLIQMPLLFALYPVIYDMQRYVP 143 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFT---LFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 +I + I DL A P + FGI P + + + P++ L+ ++ Sbjct: 144 AIKGAATSVNKFITIPDLTMA-PIQMIKESGSFGIAPAVV--IITAILLPVLSGLTQYLS 200 Query: 505 MKMSP-----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +K+S P A + M + MP+ VF + + +G+ +YW S V+ VQQ Sbjct: 201 IKLSQNISGQQMDKDNPMAGTMKTMNMT-MPIFSVFMVFTLSSGIGLYWIVSAVVRCVQQ 259 Query: 554 AVIMK 558 +I K Sbjct: 260 VLINK 264 >gi|167770830|ref|ZP_02442883.1| hypothetical protein ANACOL_02183 [Anaerotruncus colihominis DSM 17241] gi|167666870|gb|EDS11000.1| hypothetical protein ANACOL_02183 [Anaerotruncus colihominis DSM 17241] Length = 355 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 67/103 (65%), Gaps = 1/103 (0%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+ +M + ++ +G+A++L T+ V++ PL+ KQ S M+ +P+++E+++K+ Sbjct: 11 PLGWIMWACFKVLPIYGVALVLFTLIVRVCLVPLSIKQQKSMVKMQIFRPRMEEIQKKYA 70 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + + + + M++LY+ + NP +GC P+L+Q+P+ F +Y VI Sbjct: 71 NNREK-MNEEMMKLYEEEHYNPASGCLPMLIQMPILFGLYDVI 112 >gi|269977737|ref|ZP_06184697.1| membrane protein OxaA [Mobiluncus mulieris 28-1] gi|306817498|ref|ZP_07451242.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|307699977|ref|ZP_07637028.1| membrane protein insertase, YidC/Oxa1 family [Mobiluncus mulieris FB024-16] gi|269934041|gb|EEZ90615.1| membrane protein OxaA [Mobiluncus mulieris 28-1] gi|304649722|gb|EFM47003.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|307615015|gb|EFN94233.1| membrane protein insertase, YidC/Oxa1 family [Mobiluncus mulieris FB024-16] Length = 445 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 32/227 (14%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQ 417 ++I+ TVFV+LL PL KQ +T M QP++ +++K+K Q +Q+ Sbjct: 54 LSIVGLTVFVRLLLVPLFVKQIKATRAMSLAQPEMSAIQKKYKGKRDQQSMIRMQEETRA 113 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVI---------------SI-------SLEMRH 455 + + + + A C PIL Q+PVFFA+Y+++ SI + ++ H Sbjct: 114 VQRKYGASMSASCLPILFQMPVFFALYRLLYNMKPIADGVLPGHDSIGGMGQVQAQDLWH 173 Query: 456 APFWGWIKDLAAADPTNIFT---LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPP 511 + F+G L P +I + + G++ YL + + +++ Q ++ S P Sbjct: 174 STFFGQSLGLTMFGPGSIMSTKIVVGLMVAYL--VLSMLFQTAFLTMKNMSQEQLNSDNP 231 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K ++ MP++++F GL++YW SN I+QQ IM+ Sbjct: 232 MVKSTKSMMYLMPLMYLFTGPVVQVGLLVYWVTSNTWMILQQFFIMR 278 >gi|312864045|ref|ZP_07724281.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus vestibularis F0396] gi|311100458|gb|EFQ58665.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus vestibularis F0396] Length = 305 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 37/234 (15%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVS----TANMK 390 GW + + +PM +++YF N +G FG+ I+ T+ V+L+ PL Q S +A + Sbjct: 35 GWVWNLLGRPMSHVITYFANNLGLGFGLGIIFVTIIVRLIILPLGLHQSRSAAYQSAKRE 94 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 + P ++ + E+ + + Q Q ++Q + + ++ + G C P+L+Q P F A+Y Sbjct: 95 YLAPILEPINERLRNAKTQEEKLAAQSELMQAQRENGLSLMGGVGCLPLLIQFPFFSALY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF-- 502 R+ P G +KD F F + G + II +L F Sbjct: 155 ------YAARYTP--GVLKD--------DFLWFNL------GHRDFPLIIIIAALYYFQS 192 Query: 503 -IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + ++ P K A + MP++ +F S PA +I+YW + SI+QQ + Sbjct: 193 WLSVQQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWFVGGIFSIIQQLI 246 >gi|126643002|ref|YP_001085986.1| inner membrane protein (IMP) integration factor [Acinetobacter baumannii ATCC 17978] gi|126388886|gb|ABO13384.1| Inner membrane protein (IMP) integration factor [Acinetobacter baumannii ATCC 17978] Length = 366 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 79/333 (23%), Positives = 140/333 (42%), Gaps = 46/333 (13%) Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD---------------- 125 IN KG + L + SN P V L ++ K Y A+ Sbjct: 38 INPKGGDIVRIELLSHDKSKDSNQPFVML--ENDAKRTYVAQSGLIGLNGPDSSRGGRPL 95 Query: 126 YVSTANNIELPNSNTVWNLI--SGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKI 182 Y + L ++ V + S K+LT + +VFK + +T + + Y + Sbjct: 96 YAVEKTSYTLADAKGVQDQSGHSEKVLT----VPMVFKTPEGVEIIKTFTFTQGQYPIVV 151 Query: 183 VDTVTNNSIDQIRFSPRGRIMRH------KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 V N S + G++ R K T G G D + K+++ Sbjct: 152 KHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFLGGAWGTPDAHYNKLKFAN 211 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPS--KETSFHSQFKYLSDGHARYQAK------ 288 + + N W+ + Y+ S +IP K T + Q Y++ +R A Sbjct: 212 FSEEKL-NTEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQ-PYVAKLESRQSADHMNIIG 269 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F++ I + G S+ L++G P + KDLA+ +D+GW + IAK +F+ Sbjct: 270 FTSPVINVPAGTSMEVDAKLYSG----PKVQSELKDLAV-GLNQTVDYGWLWPIAKLLFL 324 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 + +F+++VGN+G +I+L T+ VK++ +PL++K Sbjct: 325 GLQFFHSIVGNWGWSIILLTIMVKMILWPLSQK 357 >gi|88807549|ref|ZP_01123061.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 7805] gi|88788763|gb|EAR19918.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 7805] Length = 382 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 10/113 (8%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---Q 405 ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + + + + K Sbjct: 13 ILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEIKARFA 72 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 S PQ Q+ + +L K +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 73 SNPQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|148985978|ref|ZP_01819031.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP3-BS71] gi|147921951|gb|EDK73076.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP3-BS71] Length = 274 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ + P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 57 SIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 116 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L + D T Sbjct: 117 RKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGQFL-WI-NLGSVDTTL--- 171 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +LP F + W + K AM+ ++F+FA+ + P Sbjct: 172 ---VLPILAAVFTFLSTW---------LSNKALSERNGATTAMMYGIPVLIFIFAVYA-P 218 Query: 536 AGLIIYWSWSNVISIVQ 552 G+ +YW+ SN ++Q Sbjct: 219 GGVALYWTVSNAYQVLQ 235 >gi|67921808|ref|ZP_00515325.1| 60 kDa inner membrane protein [Crocosphaera watsonii WH 8501] gi|67856400|gb|EAM51642.1| 60 kDa inner membrane protein [Crocosphaera watsonii WH 8501] Length = 378 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 72/129 (55%), Gaps = 12/129 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++L +PL+ Q + M+ Q Sbjct: 1 MDFGIGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRLGLYPLSAGQIRNMRKMRITQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P + E++ ++K P + Q+ M +L + NPLAGC P++LQ+P+ FA++ Sbjct: 61 PLMKERQAEIQSRYKDDPAKQ-QEEMGKLMQQFG-NPLAGCLPLVLQMPILFALFAT--- 115 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 116 ---LRGSPF 121 >gi|148241736|ref|YP_001226893.1| putative inner membrane protein translocase component YidC [Synechococcus sp. RCC307] gi|147850046|emb|CAK27540.1| Preprotein translocase subunit YidC [Synechococcus sp. RCC307] Length = 378 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 12/114 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID----ELREKFK 404 ++ +FY LV ++G+AI+ TV ++L FPL+ + M+ QP + E+R KF Sbjct: 13 ILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRNARRMRIAQPVMQQRQAEIRSKFA 72 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +P + Q+ M +L K +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 73 NNPSKQ-QEEMGKLMKEFG-SPLAGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|301800797|emb|CBW33449.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae OXC141] Length = 276 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ + P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 59 SIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 118 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L + D T Sbjct: 119 RKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGQFL-WI-NLGSVDTTL--- 173 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +LP F + W + K AM+ ++F+FA+ + P Sbjct: 174 ---VLPILAAVFTFLSTW---------LSNKALSERNGATTAMMYGIPVLIFIFAVYA-P 220 Query: 536 AGLIIYWSWSNVISIVQ 552 G+ +YW+ SN ++Q Sbjct: 221 GGVALYWTVSNAYQVLQ 237 >gi|289450229|ref|YP_003475561.1| YidC/Oxa1 family membrane protein insertase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184776|gb|ADC91201.1| membrane protein insertase, YidC/Oxa1 family [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 321 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 65/104 (62%), Gaps = 1/104 (0%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +M Y++ N+G+ I++ TV ++L+ P + KQ+ +T + + P++D+L+ + + Sbjct: 18 IMRNLYDIFNNYGLVIIIFTVAIRLIMIPFSVKQHKTTLKTQALAPQLDDLKRVYGKD-R 76 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 Q LQ+A + LY+ HN++ GC P LL + + + +Y+++S L+ Sbjct: 77 QGLQEATMALYRKHNVSQFGGCLPSLLPLIIIWPVYRMVSSPLQ 120 >gi|148240237|ref|YP_001225624.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 7803] gi|147848776|emb|CAK24327.1| Preprotein translocase subunit YidC [Synechococcus sp. WH 7803] Length = 383 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 10/113 (8%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---Q 405 ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + + + + K Sbjct: 13 ILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEIKARFA 72 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 S PQ Q+ + +L K +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 73 SNPQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|303254945|ref|ZP_07341026.1| SpoIIIJ family protein [Streptococcus pneumoniae BS455] gi|302598081|gb|EFL65146.1| SpoIIIJ family protein [Streptococcus pneumoniae BS455] Length = 274 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ + P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 57 SIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 116 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L + D T Sbjct: 117 RKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGHFL-WI-NLGSVDTTL--- 171 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +LP F + W + K AM+ ++F+FA+ + P Sbjct: 172 ---VLPILAAVFTFLSTW---------LSNKALSERNGATTAMMYGIPVLIFIFAVYA-P 218 Query: 536 AGLIIYWSWSNVISIVQ 552 G+ +YW+ SN ++Q Sbjct: 219 GGVTLYWTVSNAYQVLQ 235 >gi|307329913|ref|ZP_07609066.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces violaceusniger Tu 4113] gi|306884404|gb|EFN15437.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces violaceusniger Tu 4113] Length = 220 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 28/206 (13%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ V+ PLA+ + PK+ EL K K P + L++AM +L Sbjct: 31 IVLFTLCVRAALHPLARAAVRGEKARAALAPKLTELSRKHKGDP-ERLRRAMAELRAKEG 89 Query: 424 INPLAGCWPILLQIPVFFAIYKVIS--------ISLEMRHAPFWG-WIKDLAAADPTNIF 474 +PLAGC P L Q+PVFF +Y V S + + AP W L+ A Sbjct: 90 ASPLAGCLPALAQLPVFFVMYHVFSTGSGAGDLLDHTLAGAPLGARWGGALSGA------ 143 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLS--MFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 PG +H+G++ +I +++ +++ + + P G A L + + + Sbjct: 144 ----------PGLVHLGLFALIAAVATWTYLRARRTTAPGAPGVARALPLLSFGTLVTAA 193 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558 P +Y + S + V++A++ + Sbjct: 194 VVPLAAALYLATSTTWTAVERALLHR 219 >gi|332709872|ref|ZP_08429828.1| YidC/Oxa1 family membrane protein insertase [Lyngbya majuscula 3L] gi|332351243|gb|EGJ30827.1| YidC/Oxa1 family membrane protein insertase [Lyngbya majuscula 3L] Length = 389 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 12/129 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ FPL + MK Q Sbjct: 1 MDFGIGFISNNIMLPILDFFYGIVPSYGLAIIALTLVIRFALFPLNAGSIRNMRRMKVTQ 60 Query: 394 PKI----DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P + + ++E++K P + Q+ M +L++ NPLAGC P+L+Q+PV FA++ Sbjct: 61 PLMKKEQEAIKERYKDDPAKQ-QEEMSKLFQKFG-NPLAGCLPLLVQMPVLFALFAT--- 115 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 116 ---LRGSPF 121 >gi|225859797|ref|YP_002741307.1| membrane protein OxaA 1 [Streptococcus pneumoniae 70585] gi|225721177|gb|ACO17031.1| membrane protein OxaA 1 [Streptococcus pneumoniae 70585] Length = 276 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ + P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 59 SIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 118 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L + D T Sbjct: 119 RKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGHFL-WI-NLGSVDTTL--- 173 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +LP F + W + K AM+ ++F+FA+ + P Sbjct: 174 ---VLPILAAVFTFLSTW---------LSNKALSERNGATTAMMYGIPVLIFIFAVYA-P 220 Query: 536 AGLIIYWSWSNVISIVQ 552 G+ +YW+ SN ++Q Sbjct: 221 GGVALYWTVSNAYQVLQ 237 >gi|87123705|ref|ZP_01079555.1| Putative inner membrane protein; similar to 60 kDa inner membrane protein family protein [Synechococcus sp. RS9917] gi|86168274|gb|EAQ69531.1| Putative inner membrane protein; similar to 60 kDa inner membrane protein family protein [Synechococcus sp. RS9917] Length = 381 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 12/114 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID----ELREKFK 404 ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + E++ +F Sbjct: 13 ILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEIKSRFA 72 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + PQ Q+ + +L K +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 73 NN-PQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|307705714|ref|ZP_07642560.1| membrane protein oxaA 1 [Streptococcus mitis SK597] gi|307620728|gb|EFN99818.1| membrane protein oxaA 1 [Streptococcus mitis SK597] Length = 274 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ L P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 57 SIGVGIILFTVLIRTLLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 116 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L D T Sbjct: 117 RKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGHFL-WI-NLGGVDTTL--- 171 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +LP F + W + K AM+ ++F+F + + P Sbjct: 172 ---VLPILAAVFTFLSTW---------LSNKALSERNGATTAMMYGIPVLIFIFGVYA-P 218 Query: 536 AGLIIYWSWSNVISIVQ 552 +G+ +YW+ SN ++Q Sbjct: 219 SGVALYWAVSNAYQVLQ 235 >gi|237738569|ref|ZP_04569050.1| inner membrane protein YIDC [Fusobacterium sp. 2_1_31] gi|229424052|gb|EEO39099.1| inner membrane protein YIDC [Fusobacterium sp. 2_1_31] Length = 206 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 75/224 (33%), Positives = 118/224 (52%), Gaps = 36/224 (16%) Query: 350 MSYFYNL---------------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 MSY YNL VGNFG++I++ T+ +K+ PL KQ S MK IQP Sbjct: 1 MSYLYNLLKQFLALLLTTTDKYVGNFGVSIIIVTILIKIALLPLTLKQDKSMKEMKKIQP 60 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 ++++L+EK+ Q+L ++LYK H +NPL GC P+LLQ+P+ FA++ V+ + Sbjct: 61 ELEKLKEKYAND-KQMLNIKTMELYKEHKVNPLGGCLPLLLQLPILFALFGVLRSGIIPA 119 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + F W+K L DP F +LP L G ++S F Q M ++ Sbjct: 120 DSSFL-WLK-LPEPDP------FFVLPV-LNG-----------AVSFFQQKLMGSADSNP 159 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ P++ +F P+GL +YW S+++++VQQ IMK Sbjct: 160 QMKNMMYIFPIMMIFISYRMPSGLQLYWLTSSILAVVQQYFIMK 203 >gi|225861860|ref|YP_002743369.1| membrane protein OxaA 1 [Streptococcus pneumoniae Taiwan19F-14] gi|225726646|gb|ACO22497.1| membrane protein OxaA 1 [Streptococcus pneumoniae Taiwan19F-14] gi|327389035|gb|EGE87382.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA04375] gi|332199116|gb|EGJ13196.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA41317] Length = 257 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ + P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 40 SIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 99 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L + D T Sbjct: 100 RKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGHFL-WI-NLGSVDTTL--- 154 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +LP F + W + K AM+ ++F+FA+ + P Sbjct: 155 ---VLPILAAVFTFLSTW---------LSNKALSERNGATTAMMYGIPVLIFIFAVYA-P 201 Query: 536 AGLIIYWSWSNVISIVQ 552 G+ +YW+ SN ++Q Sbjct: 202 GGVALYWTVSNAYQVLQ 218 >gi|116073512|ref|ZP_01470774.1| putative inner membrane protein translocase component YidC [Synechococcus sp. RS9916] gi|116068817|gb|EAU74569.1| putative inner membrane protein translocase component YidC [Synechococcus sp. RS9916] Length = 380 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 12/114 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID----ELREKFK 404 ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + E++ +F Sbjct: 13 ILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEIKSRFA 72 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + PQ Q+ + +L K +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 73 NN-PQKQQEELQKLMKEFG-SPLAGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|322378154|ref|ZP_08052639.1| SpoIIIJ family protein [Streptococcus sp. M334] gi|321280884|gb|EFX57899.1| SpoIIIJ family protein [Streptococcus sp. M334] Length = 276 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ L P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 59 SIGVGIILFTVLIRTLLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 118 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L D T Sbjct: 119 RKVFKEMGVRHSDSLWPILIQMPVILALFQALSRVDFLKTGHFL-WI-NLGGVDTTL--- 173 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +LP F + W + K AM+ ++FVF + + P Sbjct: 174 ---VLPILAAVFTFLSTW---------LSNKALSERNGATTAMMYGIPVLIFVFGVYA-P 220 Query: 536 AGLIIYWSWSNVISIVQ 552 +G+ +YW+ SN ++Q Sbjct: 221 SGVALYWAVSNAYQVLQ 237 >gi|268319894|ref|YP_003293550.1| membrane protein [Lactobacillus johnsonii FI9785] gi|262398269|emb|CAX67283.1| membrane protein [Lactobacillus johnsonii FI9785] Length = 327 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 36/236 (15%) Query: 336 WGW-FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL--AKKQYVSTANM 389 + W F KP+ +M + +G G AI++ T V+L+ PL A ++ ++T Sbjct: 40 YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 390 KN--IQPKIDELREKFKQ---SPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVF 440 K +QP++ ++E K+ + PQ +Q + +Q+ YK +N++ + G C P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSL 499 IY+ ++ S E+ + F+G ++ + I T+ L + + G++ +GI Sbjct: 160 MGIYQAVAYSKELAASSFFG----ISLGQRSIILTVIATLFYVIQGYLSMIGI------- 208 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K M L P + F S P L +Y+ +I+I+QQ + Sbjct: 209 ---------PEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLI 255 >gi|332199472|gb|EGJ13548.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA47901] Length = 257 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 26/216 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YF AK + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I L Sbjct: 26 YFFAK-----IIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKAL 80 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 RE++ L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 81 REQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTG 140 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 F WI +L + D T +LP F + W + K Sbjct: 141 HFL-WI-NLGSVDTTL------VLPILAAVFTFLSTW---------LSNKALSERNGATT 183 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 AM+ ++F+FA+ + P G+ +YW+ SN ++Q Sbjct: 184 AMMYGIPVLIFIFAVYA-PGGVALYWTVSNAYQVLQ 218 >gi|300174207|ref|YP_003773373.1| membrane protein OxaA [Leuconostoc gasicomitatum LMG 18811] gi|299888586|emb|CBL92554.1| Membrane protein oxaA 1 precursor [Leuconostoc gasicomitatum LMG 18811] Length = 279 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 23/198 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ- 417 N+G+ I++ T+ ++ L PL Q S M+ +QP + L+ K+ + Q M + Sbjct: 64 NYGMGIIVFTILIRFLILPLMVYQIQSMMKMQIVQPALKALQSKYPGKDTESRQLMMAEQ 123 Query: 418 --LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 LYK +NP A P+++Q+PV A+Y+ I S +R F W++ L DP Sbjct: 124 QALYKDAGVNPFASMLPLIVQMPVLIALYQSIYNSQVLRSGKFL-WLQ-LGNNDP----- 176 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSF 534 + ILP F W + P G + ++ PVV F+ + Sbjct: 177 -YYILPILAALFTFASSW-----------LSTQATPEQNGMTKAMPYIFPVVIFFSAIAV 224 Query: 535 PAGLIIYWSWSNVISIVQ 552 P+ L +YW N+ +Q Sbjct: 225 PSALSLYWVVGNLFQTIQ 242 >gi|307068652|ref|YP_003877618.1| preprotein translocase subunit YidC [Streptococcus pneumoniae AP200] gi|306410189|gb|ADM85616.1| Preprotein translocase subunit YidC [Streptococcus pneumoniae AP200] Length = 268 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ + P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 51 SIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 110 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L + D T Sbjct: 111 RKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGHFL-WI-NLGSVDTTL--- 165 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +LP F + W + K AM+ ++F+FA+ + P Sbjct: 166 ---VLPILAAVFTFLSTW---------LSNKALSERNGATTAMMYGIPVLIFIFAVYA-P 212 Query: 536 AGLIIYWSWSNVISIVQ 552 G+ +YW+ SN ++Q Sbjct: 213 GGVALYWTVSNAYQVLQ 229 >gi|225855530|ref|YP_002737042.1| membrane protein OxaA 1 [Streptococcus pneumoniae JJA] gi|225724047|gb|ACO19900.1| membrane protein OxaA 1 [Streptococcus pneumoniae JJA] gi|301794976|emb|CBW37440.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae INV104] Length = 276 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 26/216 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YF AK + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I L Sbjct: 45 YFFAKII-----RFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKAL 99 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 RE++ L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 100 REQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTG 159 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 F WI +L + D T +LP F + W + K Sbjct: 160 HFL-WI-NLGSVDTTL------VLPILAAVFTFLSTW---------LSNKALSERNGATT 202 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 AM+ ++F+FA+ + P G+ +YW+ SN ++Q Sbjct: 203 AMMYGIPVLIFIFAVYA-PGGVALYWTVSNAYQVLQ 237 >gi|307709883|ref|ZP_07646331.1| membrane protein oxaA 1 [Streptococcus mitis SK564] gi|307619373|gb|EFN98501.1| membrane protein oxaA 1 [Streptococcus mitis SK564] Length = 274 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ L P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 57 SIGVGIILFTVLIRTLLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 116 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L D T Sbjct: 117 RKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGHFL-WI-NLGGVDTTL--- 171 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +LP F + W + K AM+ ++F+F + + P Sbjct: 172 ---VLPILAAVFTFLSTW---------LSNKALSERNGATTAMMYGIPVLIFIFGVYA-P 218 Query: 536 AGLIIYWSWSNVISIVQ 552 +G+ +YW+ SN ++Q Sbjct: 219 SGVALYWAVSNAYQVLQ 235 >gi|289167102|ref|YP_003445369.1| oxaA1 [Streptococcus mitis B6] gi|288906667|emb|CBJ21501.1| oxaA1 [Streptococcus mitis B6] Length = 276 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 23/198 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ + P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 59 SIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 118 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L D T Sbjct: 119 RKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGHFL-WI-NLGGVDTTL--- 173 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFVFALSSF 534 +LP F + W +LS + ++ +PV +F+FA+ + Sbjct: 174 ---VLPVLAAVFTFLSTWLSNKALS----------ERNGATTAMMYGIPVLIFIFAVYA- 219 Query: 535 PAGLIIYWSWSNVISIVQ 552 P G+ +YW+ SN ++Q Sbjct: 220 PGGVALYWTVSNAYQVLQ 237 >gi|15903894|ref|NP_359444.1| SpoIIIJ family protein [Streptococcus pneumoniae R6] gi|111658725|ref|ZP_01409362.1| hypothetical protein SpneT_02000138 [Streptococcus pneumoniae TIGR4] gi|116516129|ref|YP_817257.1| SpoIIIJ family protein [Streptococcus pneumoniae D39] gi|182684977|ref|YP_001836724.1| spoIIIJ family protein [Streptococcus pneumoniae CGSP14] gi|183603316|ref|ZP_02714133.2| membrane protein OxaA 1 [Streptococcus pneumoniae SP195] gi|183603675|ref|ZP_02718782.2| membrane protein OxaA 1 [Streptococcus pneumoniae CDC3059-06] gi|183603897|ref|ZP_02722826.2| membrane protein OxaA 1 [Streptococcus pneumoniae MLV-016] gi|221232758|ref|YP_002511912.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae ATCC 700669] gi|225857614|ref|YP_002739125.1| membrane protein OxaA 1 [Streptococcus pneumoniae P1031] gi|298501539|ref|YP_003723479.1| membrane protein OxaA family protein [Streptococcus pneumoniae TCH8431/19A] gi|307128242|ref|YP_003880273.1| membrane protein OxaA 1 [Streptococcus pneumoniae 670-6B] gi|38503004|sp|Q8DN93|OXAA1_STRR6 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|15459542|gb|AAL00655.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116076705|gb|ABJ54425.1| SpoIIIJ family protein [Streptococcus pneumoniae D39] gi|182630311|gb|ACB91259.1| spoIIIJ family protein [Streptococcus pneumoniae CGSP14] gi|183571669|gb|EDT92197.1| membrane protein OxaA 1 [Streptococcus pneumoniae SP195] gi|183575420|gb|EDT95948.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC3059-06] gi|183577374|gb|EDT97902.1| membrane protein OxaA 1 [Streptococcus pneumoniae MLV-016] gi|220675220|emb|CAR69809.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae ATCC 700669] gi|225725643|gb|ACO21495.1| membrane protein OxaA 1 [Streptococcus pneumoniae P1031] gi|298237134|gb|ADI68265.1| membrane protein OxaA family protein [Streptococcus pneumoniae TCH8431/19A] gi|301802719|emb|CBW35488.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae INV200] gi|306485304|gb|ADM92173.1| membrane protein OxaA 1 [Streptococcus pneumoniae 670-6B] Length = 276 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ + P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 59 SIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 118 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L + D T Sbjct: 119 RKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGHFL-WI-NLGSVDTTL--- 173 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +LP F + W + K AM+ ++F+FA+ + P Sbjct: 174 ---VLPILAAVFTFLSTW---------LSNKALSERNGATTAMMYGIPVLIFIFAVYA-P 220 Query: 536 AGLIIYWSWSNVISIVQ 552 G+ +YW+ SN ++Q Sbjct: 221 GGVALYWTVSNAYQVLQ 237 >gi|237650612|ref|ZP_04524864.1| membrane protein OxaA 1 [Streptococcus pneumoniae CCRI 1974] gi|237821072|ref|ZP_04596917.1| membrane protein OxaA 1 [Streptococcus pneumoniae CCRI 1974M2] Length = 274 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 26/216 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YF AK + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I L Sbjct: 43 YFFAK-----IIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKAL 97 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 RE++ L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 98 REQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTG 157 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 F WI +L + D T +LP F + W + K Sbjct: 158 HFL-WI-NLGSVDTTL------VLPILAAVFTFLSTW---------LSNKALSERNGATT 200 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 AM+ ++F+FA+ + P G+ +YW+ SN ++Q Sbjct: 201 AMMYGIPVLIFIFAVYA-PGGVALYWTVSNAYQVLQ 235 >gi|322517496|ref|ZP_08070369.1| membrane protein [Streptococcus vestibularis ATCC 49124] gi|322123978|gb|EFX95537.1| membrane protein [Streptococcus vestibularis ATCC 49124] Length = 305 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 37/234 (15%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS----TANMK 390 GW + + +PM +++YF +NL FG+ I+ T+ V+L+ PL Q S +A + Sbjct: 35 GWVWNLLGRPMSHVITYFAHNLNLGFGLGIIFVTIIVRLIILPLGLHQSRSAAYQSAKRE 94 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 + P ++ + E+ + + Q Q ++Q + + ++ + G C P+L+Q P F A+Y Sbjct: 95 YLAPVLEPINERLRNAETQEEKMAAQSELMQAQRENGLSLMGGVGCLPLLIQFPFFSALY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF-- 502 R+ P G +KD F F + G + II +L F Sbjct: 155 ------YAARYTP--GVLKD--------DFLWFNL------GHRDFPLIIIIAALYYFQS 192 Query: 503 -IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + ++ P K A + MP++ +F S PA +I+YW + SI+QQ + Sbjct: 193 WLSIQQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWFVGGIFSIIQQLI 246 >gi|15901862|ref|NP_346466.1| SpoIIIJ family protein [Streptococcus pneumoniae TIGR4] gi|148989738|ref|ZP_01821047.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP6-BS73] gi|148992121|ref|ZP_01821895.1| SpoIIIJ family protein [Streptococcus pneumoniae SP9-BS68] gi|148998805|ref|ZP_01826242.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP11-BS70] gi|149007810|ref|ZP_01831406.1| SpoIIIJ family protein [Streptococcus pneumoniae SP18-BS74] gi|149011894|ref|ZP_01833042.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP19-BS75] gi|149023609|ref|ZP_01836112.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP23-BS72] gi|168484114|ref|ZP_02709066.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1873-00] gi|168487013|ref|ZP_02711521.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1087-00] gi|168492462|ref|ZP_02716605.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC0288-04] gi|298229605|ref|ZP_06963286.1| membrane protein OxaA 1 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254931|ref|ZP_06978517.1| membrane protein OxaA 1 [Streptococcus pneumoniae str. Canada MDR_19A] gi|303260531|ref|ZP_07346498.1| spoIIIJ family protein [Streptococcus pneumoniae SP-BS293] gi|303262888|ref|ZP_07348824.1| spoIIIJ family protein [Streptococcus pneumoniae SP14-BS292] gi|303265199|ref|ZP_07351111.1| spoIIIJ family protein [Streptococcus pneumoniae BS397] gi|303266566|ref|ZP_07352452.1| spoIIIJ family protein [Streptococcus pneumoniae BS457] gi|303268650|ref|ZP_07354441.1| spoIIIJ family protein [Streptococcus pneumoniae BS458] gi|38503144|sp|Q97NI6|OXAA1_STRPN RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|14973552|gb|AAK76106.1| SpoIIIJ family protein [Streptococcus pneumoniae TIGR4] gi|147755366|gb|EDK62416.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP11-BS70] gi|147760660|gb|EDK67633.1| SpoIIIJ family protein [Streptococcus pneumoniae SP18-BS74] gi|147763849|gb|EDK70782.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP19-BS75] gi|147924854|gb|EDK75937.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP6-BS73] gi|147929170|gb|EDK80181.1| SpoIIIJ family protein [Streptococcus pneumoniae SP9-BS68] gi|147929708|gb|EDK80699.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP23-BS72] gi|172042591|gb|EDT50637.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1873-00] gi|183570087|gb|EDT90615.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1087-00] gi|183573390|gb|EDT93918.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC0288-04] gi|302635971|gb|EFL66470.1| spoIIIJ family protein [Streptococcus pneumoniae SP14-BS292] gi|302638329|gb|EFL68797.1| spoIIIJ family protein [Streptococcus pneumoniae SP-BS293] gi|302641815|gb|EFL72171.1| spoIIIJ family protein [Streptococcus pneumoniae BS458] gi|302643903|gb|EFL74164.1| spoIIIJ family protein [Streptococcus pneumoniae BS457] gi|302645280|gb|EFL75515.1| spoIIIJ family protein [Streptococcus pneumoniae BS397] gi|332071754|gb|EGI82246.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA17545] gi|332071835|gb|EGI82325.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA17570] gi|332199188|gb|EGJ13267.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA47368] Length = 274 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ + P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 57 SIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 116 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L + D T Sbjct: 117 RKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGHFL-WI-NLGSVDTTL--- 171 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +LP F + W + K AM+ ++F+FA+ + P Sbjct: 172 ---VLPILAAVFTFLSTW---------LSNKALSERNGATTAMMYGIPVLIFIFAVYA-P 218 Query: 536 AGLIIYWSWSNVISIVQ 552 G+ +YW+ SN ++Q Sbjct: 219 GGVALYWTVSNAYQVLQ 235 >gi|282881780|ref|ZP_06290438.1| membrane protein OxaA [Peptoniphilus lacrimalis 315-B] gi|281298390|gb|EFA90828.1| membrane protein OxaA [Peptoniphilus lacrimalis 315-B] Length = 244 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 45/236 (19%) Query: 348 MLMSYFYNLVGN-----------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + + Y YNL+ + ++I++TT+ +K+L PL Q + M +QP+I Sbjct: 11 IFIRYVYNLIAQIIPNEPTNISYYALSIIITTLILKILVLPLTISQMKNQKKMAELQPEI 70 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--SISLEMR 454 ++++K+K PQ L QLYK+ N N L+GC P+++Q+ V Y+ + Sbjct: 71 AKIQKKYKND-PQTLAMKQRQLYKSANYNVLSGCLPMIVQLLVLVGFYRCFYKPQTYIFS 129 Query: 455 HAPFWG-------WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 A F+ +I +L AD T I + + ++ Sbjct: 130 QAGFYQAMNKNFFYISNLGVADKTMILPALAAITTFFTSYLAT----------------- 172 Query: 508 SPPPADKGQAM-------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P A GQ ++ MP++ F + A L+IYW+ SN+ +IVQQ V+ Sbjct: 173 KSPAAGAGQDQAKSMMNSMMVAMPIMIFFMGRTLQAELVIYWTVSNIFAIVQQLVV 228 >gi|268320270|ref|YP_003293926.1| hypothetical protein FI9785_1808 [Lactobacillus johnsonii FI9785] gi|262398645|emb|CAX67659.1| conserved membrane protein [Lactobacillus johnsonii FI9785] Length = 291 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 57/221 (25%), Positives = 111/221 (50%), Gaps = 24/221 (10%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y+I++ + + S ++ ++G AI++ T+ V+++ PL S A + +QP++D L Sbjct: 54 YYISQFILWIASLVHD---SYGWAIIIFTIIVRIILLPLNAISIRSMAKQQKVQPQMDAL 110 Query: 400 REKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 R+K+ Q LQ+ +LYK INP GC P+L+Q+PV +A+Y+ I + ++++ Sbjct: 111 RKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTPQLQNG 170 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 F W+ DL DP + ++P F +S +I +P + G Sbjct: 171 RFL-WM-DLGRPDP------YYLMPILAAVFTF---------MSTYISQMSTPQSSQNGM 213 Query: 517 AMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + + MP++ + + + +YW SN+ +VQ ++ Sbjct: 214 TKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFIL 254 >gi|172036279|ref|YP_001802780.1| putative inner membrane protein translocase component YidC [Cyanothece sp. ATCC 51142] gi|171697733|gb|ACB50714.1| putative 60 kD inner membrane insertion protein [Cyanothece sp. ATCC 51142] Length = 378 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 12/129 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ Q + M+ Q Sbjct: 1 MDFGIGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRFGLYPLSAGQIRNMRKMRITQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P + E++ ++K P + Q+ M +L + NPLAGC P+LLQ+P+ FA++ Sbjct: 61 PLMKERQAEIQRRYKDDPTKQ-QEEMGKLMQEFG-NPLAGCLPLLLQMPILFALFAT--- 115 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 116 ---LRGSPF 121 >gi|159027290|emb|CAO89385.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 382 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 10/128 (7%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +F+ +V ++G AI+ T+ V+ FPL+ Q + M+ Q Sbjct: 1 MDFGVGFISTNIMLPILDFFFRIVHSYGFAIIALTLVVRFAVFPLSAGQIRNMRKMRITQ 60 Query: 394 PKIDELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + E + + +Q + PQ Q+ M +L + NPLAGC P+LLQ+P+ A++ Sbjct: 61 PLMKERQAEIQQRYKNDPQKQQEEMGKLMQELG-NPLAGCLPLLLQMPILLALFAT---- 115 Query: 451 LEMRHAPF 458 +R +PF Sbjct: 116 --LRGSPF 121 >gi|166363143|ref|YP_001655416.1| putative inner membrane protein translocase component YidC [Microcystis aeruginosa NIES-843] gi|166085516|dbj|BAG00224.1| inner membrane protein [Microcystis aeruginosa NIES-843] Length = 382 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 10/128 (7%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +F+ +V ++G AI+ T+ V+ FPL+ Q + M+ Q Sbjct: 1 MDFGVGFISTNIMLPILDFFFRIVHSYGFAIIALTLVVRFAVFPLSAGQIRNMRKMRITQ 60 Query: 394 PKIDELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + E + + +Q + PQ Q+ M +L + NPLAGC P+LLQ+P+ A++ Sbjct: 61 PLMKERQTEIQQRYKNDPQKQQEEMGKLMQELG-NPLAGCLPLLLQMPILLALFAT---- 115 Query: 451 LEMRHAPF 458 +R +PF Sbjct: 116 --LRGSPF 121 >gi|303280353|ref|XP_003059469.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] gi|226459305|gb|EEH56601.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] Length = 240 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 38/211 (18%) Query: 363 AIMLTTVFVKLLFFPL-------AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 AI T +++ FPL A K +++ M +Q I+E R + L + + Sbjct: 34 AIAAATCVMRVCAFPLTIMQQKSAGKMHLAKPEMTALQESINEARRAGEHERAARLGR-V 92 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE----MRHAPFWGWIKDLAAADPT 471 ++ H+++P P+L Q PVF + Y IS E MR F W +DL+ ADPT Sbjct: 93 FAIWSKHDVHPAKMLAPLLFQAPVFISFYFAISRMAEGLPSMRDGGF-AWFQDLSIADPT 151 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNW----MPV 525 F L PII SL+ ++ +P P Q + W + V Sbjct: 152 --FAL-----------------PIISSLTFLAAVEFAPQNPAVKSSQREMTKWGLRALGV 192 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V +SFP+G+ +YW SNV S Q ++ Sbjct: 193 AMVPLTASFPSGVFVYWITSNVFSFAQTVLL 223 >gi|194398180|ref|YP_002038622.1| SpoIIIJ family protein [Streptococcus pneumoniae G54] gi|194357847|gb|ACF56295.1| SpoIIIJ family protein [Streptococcus pneumoniae G54] Length = 274 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L TV ++ + P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 57 SIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 116 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L + D T Sbjct: 117 RKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGHFL-WI-NLGSVDTTL--- 171 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +LP F + W + K AM+ ++F+FA+ + P Sbjct: 172 ---VLPILAAVFTFLSTW---------LSNKALSERNGATTAMMYGIPVLIFIFAVYA-P 218 Query: 536 AGLIIYWSWSNVISIVQ 552 G+ +YW+ SN ++Q Sbjct: 219 GGVALYWTVSNAYQVLQ 235 >gi|126661516|ref|ZP_01732565.1| putative inner membrane protein translocase component YidC [Cyanothece sp. CCY0110] gi|126617201|gb|EAZ88021.1| putative inner membrane protein translocase component YidC [Cyanothece sp. CCY0110] Length = 378 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 12/129 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ Q + M+ Q Sbjct: 1 MDFGIGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRFGLYPLSAGQIRNMRKMRITQ 60 Query: 394 PKIDE----LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P + E ++ ++K P + Q+ M +L + NPLAGC P+LLQ+P+ FA++ Sbjct: 61 PLMKERQADIQRRYKDDPTKQ-QEEMGKLMQEFG-NPLAGCLPLLLQMPILFALFAT--- 115 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 116 ---LRGSPF 121 >gi|253681205|ref|ZP_04862003.1| OxaA [Clostridium botulinum D str. 1873] gi|253562443|gb|EES91894.1| OxaA [Clostridium botulinum D str. 1873] Length = 247 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 115/221 (52%), Gaps = 26/221 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G+ I++ T+ ++++ FPL KQ S M IQP+I +L+EK+K + PQ Q+ M++L Sbjct: 43 SYGLTIIVLTLIIRIVLFPLNYKQIKSQVAMTEIQPEIKKLQEKYK-NDPQRQQQEMMKL 101 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI-FTLF 477 YK + +NPL GC P+LLQ P+ A++ V + +L+ +P+ + T Sbjct: 102 YKEYGVNPLGGCLPLLLQWPILIALFYVFN---------------NLSKIEPSIVNVTFL 146 Query: 478 GIL---PFYL-PGFMHVGIWPIIMS-LSMFIQMKMSPPPADKGQA----MILNWMPVVFV 528 G+ P L P + + I PI+ + L+ F + M+ +D Q M+ +M + V Sbjct: 147 GVKLMEPAILKPEYWYTWILPIVSALLTYFSTVIMTSKNSDSAQVKQTKMMSGFMTLFVV 206 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + FP L++YW +++ I Q + + + L+ Sbjct: 207 YMSFKFPTALVLYWITNSLFQIGQTVITQRSQQKKKELVQE 247 >gi|307707727|ref|ZP_07644206.1| membrane protein OxaA 1 [Streptococcus mitis NCTC 12261] gi|307616225|gb|EFN95419.1| membrane protein OxaA 1 [Streptococcus mitis NCTC 12261] Length = 274 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 57 SIGVGIILFTILIRTVLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 116 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L D T Sbjct: 117 RKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGHFL-WI-NLGGVDTTL--- 171 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +LP F + W + K AM+ ++F+FA+ + P Sbjct: 172 ---VLPILAAVFTFLSTW---------LSNKALSERNGATTAMMYGIPVLIFIFAVYA-P 218 Query: 536 AGLIIYWSWSNVISIVQ 552 G+ +YW+ SN ++Q Sbjct: 219 GGVALYWTVSNAYQVLQ 235 >gi|221091302|ref|XP_002169136.1| PREDICTED: similar to Mitochondrial inner membrane protein OXA1L [Hydra magnipapillata] Length = 424 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 61/209 (29%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQL- 418 I+ TTV + L FPL K +TA + ++P++++L+EK +++ P + +A I+L Sbjct: 180 IIATTVAFRALVFPLMIKGQANTARLAAVKPELEKLQEKLREAANYHNPNIRAQASIELQ 239 Query: 419 --YKTHNINPLAGCWPILLQIPV----FFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 +K HN NPL L+Q+P+ F AI K+ ++ +E W DL+AADP Sbjct: 240 DFFKKHNCNPLKSIISPLVQLPLFISFFIAIRKMCNLPVESLQTGGILWFSDLSAADPYM 299 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 IF PI + +M + ++ Sbjct: 300 IF-------------------PIACAFTMLLTIE-------------------------- 314 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + +YW SNV+S+V Q +++K+ G Sbjct: 315 ----AIFLYWMTSNVLSLV-QVMVLKVPG 338 >gi|317499291|ref|ZP_07957564.1| YidC/Oxa1 family membrane protein insertase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893460|gb|EFV15669.1| YidC/Oxa1 family membrane protein insertase [Lachnospiraceae bacterium 5_1_63FAA] Length = 336 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 22/209 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKA 414 N G+ I+L T+ KL+ P+ KQ S +++QP+I+++ +K++ Q Q+ Sbjct: 45 NVGLCIILFTLVSKLILLPVTMKQQRSMKINQHMQPEINKITKKYRNKRDQASMMKQQEE 104 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--------SISLEMRHAPFWGWIKDLA 466 M ++Y + +P GC P L+Q P+ A+Y VI I+ +++ P DL Sbjct: 105 MQKVYAKYGSSPTGGCLPTLIQFPIIMALYYVIRGVNTYIPQIARDVQFKPNLFLGMDLN 164 Query: 467 AADPTNIFTLFGILPF--YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 +A P T I+P ++ F+ S+S QM S P A ++M+ MP Sbjct: 165 SA-PGFRLTPLLIIPVLSFIFQFLSAKT-----SMST-TQMDDSTPGAGMTKSMMYT-MP 216 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++ S P G+ +YWS S + +QQ Sbjct: 217 LMSFVMCISLPIGIGLYWSASALFQYIQQ 245 >gi|46190726|ref|ZP_00121168.2| COG0706: Preprotein translocase subunit YidC [Bifidobacterium longum DJO10A] gi|322692115|ref|YP_004221685.1| hypothetical protein BLLJ_1929 [Bifidobacterium longum subsp. longum JCM 1217] gi|320456971|dbj|BAJ67593.1| conserved hypothetical protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 305 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 28/216 (12%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQ 417 +AI++ + V+ FPL KQ S M+ + PK+ ++ K+K Q ++AM ++ Sbjct: 22 LAIIILVLVVQACIFPLFYKQMKSMRKMQALAPKMQRIQNKYKGKTDQASREAMSRETMK 81 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMRHAPFWGWIKDLAAADPTNI 473 LY+ +++NP C P+L+Q PVF +++ +S I+ R A G D+A A Sbjct: 82 LYQDNDVNPAGSCLPMLIQGPVFMSMFYTLSAIPYIANGKRDA--LGAF-DVATAKQFTQ 138 Query: 474 FTLFGILPF-------YLPGFMHVGIWPIIMSLSM-FIQ---MKMSPPPA------DKGQ 516 +FGI+ G +GI+ +M + F+Q MK + A + Q Sbjct: 139 TDVFGIVSVTDNFTSAAASGKAVIGIFVFLMCFCLWFMQYFSMKRNMAAASMNKQTETMQ 198 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +L PV+++F+ + P +++YW +NV ++ + Sbjct: 199 KAMLWLFPVMYIFSGVAMPFAVLVYWLTNNVCNLCR 234 >gi|169832952|ref|YP_001695392.1| membrane protein OxaA 1 [Streptococcus pneumoniae Hungary19A-6] gi|168995454|gb|ACA36066.1| membrane protein OxaA 1 [Streptococcus pneumoniae Hungary19A-6] Length = 276 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 94/197 (47%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM 415 + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I LRE++ L++ M Sbjct: 59 SIGVGIILFTILIRTVLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEM 118 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++K + WPIL+Q+PV A+++ +S ++ F WI +L + D T Sbjct: 119 RKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGHFL-WI-NLGSVDTTL--- 173 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +LP F + W + K AM+ ++F+FA+ + P Sbjct: 174 ---VLPILAAVFTFLSTW---------LSNKALSERNGATTAMMYGIPVLIFIFAVYA-P 220 Query: 536 AGLIIYWSWSNVISIVQ 552 G+ +YW+ SN ++Q Sbjct: 221 GGVALYWTVSNAYQVLQ 237 >gi|194246772|ref|YP_002004411.1| probable preprotein translocase subunit YidC [Candidatus Phytoplasma mali] gi|193807129|emb|CAP18567.1| probable preprotein translocase subunit YidC [Candidatus Phytoplasma mali] Length = 572 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 46/258 (17%) Query: 334 IDWGW---FYFIAKPMFMLMSYFYNLV----GNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 +DW FY+I + + + +F + GN G I+LTT+ V+ L +P+ K T Sbjct: 301 LDWSGKLGFYYIWNVLIISIGFFLYIFSYIFGNLGFGIILTTILVRTLSWPIYTKTSTFT 360 Query: 387 ANMKNIQPKIDELREKF--KQSPP--QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 NM +QP+ID++R+K+ K+ P Q +Q +++YK +NI L G + LQIP+F + Sbjct: 361 LNMSLVQPEIDKIRDKYILKKDPVSIQKMQLETLRVYKKYNIGFL-GMFTTFLQIPIFIS 419 Query: 443 IYKVIS--------ISLE---MRHAPFWGWIKDLAAADPTNIFTLFGIL-PFYLPGFMHV 490 + ++ +L+ + PF G+IK +A TN + IL L F V Sbjct: 420 MLTTLNRFRIPGGIFNLDNKFLDKTPFLGFIK--LSASTTNDNDIRDILIKILLSTF--V 475 Query: 491 GIWPIIMSLSMF---------------IQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 GI II++ F I+ K +K ++ +M + VFA +F Sbjct: 476 GITMIILNKISFKKPFYLQNKSYTVLNIEEKAKREQTEKSFKIVSYFMVAIMVFA--AFN 533 Query: 536 AGLI-IYWSWSNVISIVQ 552 ++ +YW N +I Q Sbjct: 534 DNVLSLYWLVGNTYTIFQ 551 >gi|325291449|ref|YP_004267630.1| membrane protein insertase, YidC/Oxa1 family [Syntrophobotulus glycolicus DSM 8271] gi|324966850|gb|ADY57629.1| membrane protein insertase, YidC/Oxa1 family [Syntrophobotulus glycolicus DSM 8271] Length = 230 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 30/215 (13%) Query: 355 NLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +LVG +G+AI+L T+ +K++ FPL KQ S M + P I ++++K+ + + Q Sbjct: 20 SLVGLPYYGVAIILFTIIIKIILFPLTYKQTASMRKMMELTPMITDIQKKYAKDKVKANQ 79 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--FWGWIKDLAAADP 470 K M +LY NP GC P+L+Q+P+ +A YK + I A F G+ Sbjct: 80 KVM-ELYAKEKANPYMGCLPLLIQMPILWAFYKALMIFPYGNEASAMFLGF--------- 129 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ---------MKMSPPPADKGQAMILN 521 N+ +G P Y H+ I PI LS ++ P A + Q ++L Sbjct: 130 -NLTVKYGFTPDY-----HL-ILPIAAGLSTYLMSKTTSSSTVSASQPESAKQTQKIMLI 182 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 MP + +S P+GL IY N++S +Q I Sbjct: 183 VMPFFLAYITASVPSGLGIYIITMNIVSAIQTLYI 217 >gi|113478085|ref|YP_724146.1| putative inner membrane protein translocase component YidC [Trichodesmium erythraeum IMS101] gi|110169133|gb|ABG53673.1| 60 kDa inner membrane insertion protein [Trichodesmium erythraeum IMS101] Length = 382 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 13/129 (10%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + MK Q Sbjct: 1 MDFGIGFISNNIMLPILDFFYGIVPSYGLAIVALTLVIRASLYPLNAGSIRNMRKMKVTQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P + +E+++++K PQ Q+ M +L K NPLAGC P+L Q+P+ FA++ Sbjct: 61 PLMKKRQEEIQKRYKDD-PQKQQEEMGKLMK--EFNPLAGCLPLLFQMPILFALFAT--- 114 Query: 450 SLEMRHAPF 458 +R +PF Sbjct: 115 ---LRGSPF 120 >gi|167766868|ref|ZP_02438921.1| hypothetical protein CLOSS21_01385 [Clostridium sp. SS2/1] gi|167711416|gb|EDS21995.1| hypothetical protein CLOSS21_01385 [Clostridium sp. SS2/1] gi|291558407|emb|CBL37207.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [butyrate-producing bacterium SSC/2] Length = 333 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 40/218 (18%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKA 414 N G+ I+L T+ KL+ P+ KQ S +++QP+I+++ +K++ Q Q+ Sbjct: 42 NVGLCIILFTLVSKLILLPVTMKQQRSMKINQHMQPEINKITKKYRNKRDQASMMKQQEE 101 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--------SISLEMRHAPFWGWIKDLA 466 M ++Y + +P GC P L+Q P+ A+Y VI I+ +++ P DL Sbjct: 102 MQKVYAKYGSSPTGGCLPTLIQFPIIMALYYVIRGVNTYIPQIARDVQFKPNLFLGMDLN 161 Query: 467 AADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFI---------QMKMSPPPADKG 515 +A PGF + I P++ + F+ QM S P A Sbjct: 162 SA----------------PGFRLTPLLIIPVLSFIFQFLSAKTSMSTTQMDDSTPGAGMT 205 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++M+ MP++ S P G+ +YWS S + +QQ Sbjct: 206 KSMMYT-MPLMSFVMCISLPIGIGLYWSASALFQYIQQ 242 >gi|284928889|ref|YP_003421411.1| YidC/Oxa1 family, membrane protein insertase [cyanobacterium UCYN-A] gi|284809348|gb|ADB95053.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain protein [cyanobacterium UCYN-A] Length = 378 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 14/130 (10%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G +I+ T+ ++L +PL+ Q + MK Q Sbjct: 1 MDFGIGFISTNIMLPILDFFYGIVPSYGFSIIALTLVIRLALYPLSAGQIRNMRKMKITQ 60 Query: 394 PKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E +E+ ++ S Q Q+ M +L K NPLAGC P++LQ+P+ FA++ Sbjct: 61 PLMKERQEEIQRRYKDDSAKQ--QEEMGKLMKEFG-NPLAGCLPLVLQMPILFALFAT-- 115 Query: 449 ISLEMRHAPF 458 +R +PF Sbjct: 116 ----LRGSPF 121 >gi|322690180|ref|YP_004209914.1| hypothetical protein BLIF_2003 [Bifidobacterium longum subsp. infantis 157F] gi|320461516|dbj|BAJ72136.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis 157F] Length = 310 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 28/216 (12%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQ 417 +AI++ + V+ FPL KQ S M+ + PK+ ++ K+K Q ++AM ++ Sbjct: 27 LAIIILVLVVQACIFPLFYKQMKSMRKMQALAPKMQRIQNKYKGKTDQASREAMSRETMK 86 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMRHAPFWGWIKDLAAADPTNI 473 LY+ +++NP C P+L+Q PVF +++ +S I+ R A G D+A A Sbjct: 87 LYQDNDVNPAGSCLPMLIQGPVFMSMFYTLSAIPYIANGKRDA--LGAF-DVATAKQFTQ 143 Query: 474 FTLFGILPF-------YLPGFMHVGIWPIIMSLSM-FIQ---MKMSPPPA------DKGQ 516 +FGI+ G +GI+ +M + F+Q MK + A + Q Sbjct: 144 TDVFGIVSVTDNFTSAAASGKAVIGIFVFLMCFCLWFMQYFSMKRNMAAASMNKQTETMQ 203 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +L PV+++F+ + P +++YW +NV ++ + Sbjct: 204 KAMLWLFPVMYIFSGVAMPFAVLVYWLTNNVCNLCR 239 >gi|323486758|ref|ZP_08092077.1| SpoJ protein [Clostridium symbiosum WAL-14163] gi|323694900|ref|ZP_08109050.1| hypothetical protein HMPREF9475_03914 [Clostridium symbiosum WAL-14673] gi|323399897|gb|EGA92276.1| SpoJ protein [Clostridium symbiosum WAL-14163] gi|323500990|gb|EGB16902.1| hypothetical protein HMPREF9475_03914 [Clostridium symbiosum WAL-14673] Length = 414 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 6/113 (5%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F +I +F + S F L N G+ I+L T+ KLL FPL KQ S+ M + P+I Sbjct: 20 FGYIMDFLFRITSSFGIL--NLGLCIILFTIITKLLLFPLTIKQQKSSKLMSLMNPEIQA 77 Query: 399 LREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +++K+K Q Q M +Y+ + +P AGC P+L+Q P+ A+Y+VI Sbjct: 78 VQKKYKGKKDQTSMTKQQMEMQAIYEKYGSSPTAGCLPMLIQFPIIIALYRVI 130 >gi|283457086|ref|YP_003361650.1| YidC Inner membrane protein (Preprotein translocase subunit YidC) [Bifidobacterium dentium Bd1] gi|283103720|gb|ADB10826.1| YidC Inner membrane protein (Preprotein translocase subunit YidC) [Bifidobacterium dentium Bd1] Length = 309 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 109/216 (50%), Gaps = 28/216 (12%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK----QSPPQVLQKAMIQ 417 ++I+ + V FPL K S M+ IQPK+ ++ K+K Q+ + +Q+ M++ Sbjct: 26 LSIIFLVLVVHACVFPLYYKTMKSMRKMQEIQPKMARIQNKYKGKNDQASKEAMQREMMK 85 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMRHAPFWGWIKDLAAADPTNI 473 LY+ ++ NP+ C P+L+Q P+F ++ +S I+ R A G D A A Sbjct: 86 LYQDNDANPMGSCLPMLIQGPIFMCMFYTLSAIPYIARGKRAA--LGAF-DQATALQFTK 142 Query: 474 FTLF------GILPFYLPGFMHVGIWPIIMSLSM-FIQ---MKMSPP---PADKG----Q 516 T+F + + G + + I+ +M + F+Q MK + P P K Q Sbjct: 143 TTVFNTNVTDNFMTANIGGKVVIAIFVALMCFCLWFMQYNNMKRNMPQNGPQTKQTEMMQ 202 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M+L P++++F+ ++ P +++YW +N++++ + Sbjct: 203 KMMLWMFPIMYIFSGATMPFAVLVYWLANNILNLCR 238 >gi|294668107|ref|ZP_06733214.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309815|gb|EFE51058.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 409 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 95/416 (22%), Positives = 160/416 (38%), Gaps = 51/416 (12%) Query: 9 VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS 68 V A+S++I+ W+ + P+ + V+Q Q S LS + Sbjct: 8 VFFAVSLLILLGWEKIFPTPQ--------PAVSAVQQAGQQQTSPTIPA----ETGLSPA 55 Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 + + ++ I+ K L L Y + P L Y A+ D V Sbjct: 56 VPITVSTDTVNAVIDEKSGDLRSLTLLKYDSAEDQSKPFT--LFHDGKDGIYVAQSDVVD 113 Query: 129 TAN-----NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKI 182 A + ++ ++L K ++L AN I ++ + + YL I Sbjct: 114 AAGRSLTQGLSFQSAKKQYSLEGDK-----AEVRLTANTANGIQIDKIYTFTKGSYLVGI 168 Query: 183 VDTVTNNSIDQIRFSPRGRIMR--HKPQ---------TATNTFGVQEGFIAV-LGDKSLV 230 VTN S IR RI+R P+ T + Q GF V GD + Sbjct: 169 RFDVTNRSGSPIRTDGSYRIVRDGKAPEGQGYFMANYTGPVLYTPQSGFQKVKFGD---L 225 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHARYQAK 288 + + + + + + W+G+S Y+ S +I P S + D R Sbjct: 226 DDDFKEGREQAEYERKTQSGWVGMSQHYFFSSWILQPKGGQSVCTTDACRIDIKRRSDNL 285 Query: 289 FSANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 +SA I P G L+AG + + +L E++ D+G ++ A Sbjct: 286 YSAGVIVPQPELANGMKQGFGISLYAGPQTTSALGKIADNL-----ELIKDYGRVHWPAT 340 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 +F LM + GN+G AI+L T+ VK++ FPL Y S A M+ + PK++ L+ Sbjct: 341 GLFWLMDKLHGFTGNWGWAIVLLTIIVKIVLFPLNNAAYKSMAKMRAVAPKLEALK 396 >gi|282851361|ref|ZP_06260726.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus gasseri 224-1] gi|282557329|gb|EFB62926.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus gasseri 224-1] Length = 271 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 36/236 (15%) Query: 336 WGW-FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL--AKKQYVSTANM 389 + W F KP+ +M + +G G AI++ T V+L+ PL A ++ ++T Sbjct: 40 YAWVFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 390 KN--IQPKIDELREKFKQ---SPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVF 440 K +QP++ ++E K+ + PQ +Q + +Q+ YK +N++ + G C P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKDNNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSL 499 IY+ ++ S E+ + F+G ++ + + T+ L + + G++ VGI Sbjct: 160 IGIYQAVAYSKELAASSFFG----ISLGQRSIVLTIIATLLYVIQGYLSMVGI------- 208 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K M L P + F S P L +Y+ +I+I+QQ + Sbjct: 209 ---------PEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQVI 255 >gi|145347471|ref|XP_001418188.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] gi|144578417|gb|ABO96481.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] Length = 304 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 31/233 (13%) Query: 350 MSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 M YF+ G + +AI+ TVF++ + FPL Q +TA M+ +P+++ L+ K K +P Sbjct: 46 MEYFHVAHGLEWWLAIVGATVFMRTITFPLIVMQMRNTAKMQLCKPELEALQAKMKSNPQ 105 Query: 409 Q------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--- 459 Q K M +++K +++NP+ PIL+ PVF + + +IS + P + Sbjct: 106 QDPELANAYYKEMQKVWKKYDVNPVKSFAPILINAPVFISFF--FAISKMAQGVPSFESG 163 Query: 460 --GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSMFIQMKMSPPPADKGQ 516 DL+ ADPT + L F V + + M S QMK Sbjct: 164 GPSMYPDLSMADPTYSLPILSSLTF----LASVELGAVEGMQTSQSAQMK---------- 209 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-MKMHGAEIGLID 568 L + V V +SFP G+ +YW SN+ S Q ++ K + +G+ D Sbjct: 210 -WFLRALAVAMVPLTASFPQGVFVYWITSNIFSGFQTSITRTKAFKSTMGIPD 261 >gi|288906005|ref|YP_003431227.1| membrane protein [Streptococcus gallolyticus UCN34] gi|288732731|emb|CBI14305.1| putative conserved membrane protein [Streptococcus gallolyticus UCN34] Length = 306 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 32/230 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQ 393 + + +PM L+ YF N VG FG+AI+L T+ V+ + PL K Y S M ++ Sbjct: 39 HILGEPMAKLIQYFANNVGLGFGLAIILVTIIVRCIILPLGLYQSWKASYQSE-KMAYLK 97 Query: 394 PKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P + + E+ + + Q Q ++ K + IN L G C P+L+Q+P F A+Y Sbjct: 98 PIFEPINERMRNATTQEEKLAAQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAA 157 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + + + F G DL + + +L F+ G+ Sbjct: 158 QYTQGVSESTFLGI--DLGTRS-IPLTAVIAVLYFFQSWLSMQGVAE------------- 201 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 A KG + MP++ VF S PA +++YW SI+QQ + M Sbjct: 202 EQRAAMKGTMYV---MPLMMVFFGMSMPASVLLYWLVGGFFSIIQQLITM 248 >gi|222151988|ref|YP_002561148.1| hypothetical protein MCCL_1745 [Macrococcus caseolyticus JCSC5402] gi|222121117|dbj|BAH18452.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 286 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/229 (25%), Positives = 108/229 (47%), Gaps = 31/229 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN--- 391 G+FY P+ L+ + +G N+G+AI+ T+ V+L FP K Y + + M+ Sbjct: 30 GFFYDTFVHPLDQLIHWLGAHMGHNYGLAIIAITLIVRLALFPFMMKTYKNQSVMREKMA 89 Query: 392 -IQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 I+P++ E++E+ K++ Q + + M+ LYK + INPL GC P+L+Q+P+ ++ Sbjct: 90 LIKPQMTEIQERVKRARTQEEKMEANQEMMALYKENGINPLNMGCLPLLIQLPIVTGLFY 149 Query: 446 VISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 V+ E + P + W +L D I I+ +L ++ Sbjct: 150 VLKYPTEGGITQYPNFLWF-ELTKTD-----------------IAMTVIAGIVYALQAYV 191 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M+ P M++ P++ V+ + PA L +YW+ ++Q Sbjct: 192 SMQNIPEEQKAQMRMMMFISPIMIVWMSAISPAALPLYWAVGGAFLVLQ 240 >gi|306832024|ref|ZP_07465179.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978972|ref|YP_004288688.1| inner membrane protein oxaA [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|304425950|gb|EFM29067.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178900|emb|CBZ48944.1| Inner membrane protein oxaA [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 306 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 32/230 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQ 393 + + +PM L+ YF N VG FG+AI+L T+ V+ + PL K Y S M ++ Sbjct: 39 HILGEPMAKLIQYFANNVGLGFGLAIILVTIIVRCIILPLGLYQSWKASYQSE-KMAYLK 97 Query: 394 PKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P + + E+ + + Q Q ++ K + IN L G C P+L+Q+P F A+Y Sbjct: 98 PIFEPINERMRNATTQEEKLAAQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAA 157 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + + + F G DL + + +L F+ G+ Sbjct: 158 QYTQGVSESTFLGI--DLGTRS-IPLTAVIAVLYFFQSWLSMQGVAE------------- 201 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 A KG + MP++ VF S PA +++YW SI+QQ + M Sbjct: 202 EQRAAMKGTMYV---MPLMMVFFGMSMPASVLLYWLVGGFFSIIQQLITM 248 >gi|300869002|ref|ZP_07113605.1| putative inner membrane protein translocase component YidC [Oscillatoria sp. PCC 6506] gi|300332982|emb|CBN58797.1| putative inner membrane protein translocase component YidC [Oscillatoria sp. PCC 6506] Length = 369 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 10/116 (8%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE---K 402 M ++ +FY +V ++G+AI+ T+ ++ +PL + MK QP + E E K Sbjct: 1 MLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSLRNMRRMKVAQPLMKERVEQIQK 60 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + P Q+ M ++YK NPLAGC+P+L+Q+PV FA++ +R +PF Sbjct: 61 LHKDNPAKQQEEMSKVYKEFG-NPLAGCFPLLVQMPVLFALFAT------LRGSPF 109 >gi|315654393|ref|ZP_07907301.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315491428|gb|EFU81045.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] Length = 441 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 30/221 (13%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQ 417 +AI+ T+ V+L+ PL KQ ++ M QP++ + +K+K Q Q+ M Sbjct: 54 LAIVGMTIVVRLIIVPLFIKQIKASRAMSLAQPELTAITKKYKGKRDQQTMMRQQEEMKA 113 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKV------ISISLEMRHAPFWGWIKDLAAADPT 471 + K + + A C P+L+Q+PV FA+Y++ ++ H G + A A Sbjct: 114 VQKKYGASMSASCLPLLVQMPVLFALYRLLYYMSAVAHGTMPEHDSIGGMGQQQAKALWD 173 Query: 472 NIF-------TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM------------SPPPA 512 + F T+FG L + +GI + ++MF+Q S P Sbjct: 174 STFFGESLGQTMFGPTS-TLQTKIVIGIMVAFLVITMFVQTAFLSMKNMSDEQLNSDNPM 232 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 K ++ +MP+V++F GL+IYW SN S+VQQ Sbjct: 233 VKSTKSMMYFMPLVYLFTGPVVQVGLLIYWVTSNTWSLVQQ 273 >gi|55820342|ref|YP_138784.1| OxaA-like protein [Streptococcus thermophilus LMG 18311] gi|116627178|ref|YP_819797.1| OxaA-like protein precursor [Streptococcus thermophilus LMD-9] gi|55736327|gb|AAV59969.1| cytochrome oxidase biogenesis (Oxa1) family protein, similar to SpoIIIJ [Streptococcus thermophilus LMG 18311] gi|116100455|gb|ABJ65601.1| Preprotein translocase subunit YidC [Streptococcus thermophilus LMD-9] gi|312277657|gb|ADQ62314.1| Preprotein translocase subunit YidC [Streptococcus thermophilus ND03] Length = 305 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 108/234 (46%), Gaps = 37/234 (15%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVS----TANMK 390 GW + + +PM +++YF N +G FG+ I+ T+ V+ + PL Q S +A + Sbjct: 35 GWVWNLLGRPMSHVITYFANNLGLGFGLGIIFVTIIVRSIILPLGLHQSRSAAYQSAKRE 94 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 + P ++ + E+ + + Q Q ++Q + + ++ + G C P+L+Q P F A+Y Sbjct: 95 YLAPILEPINERLRNAKTQEEKMAAQSELMQAQRENGLSLMGGIGCLPLLIQFPFFSALY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF-- 502 R+ P G +KD F F + G + II +L F Sbjct: 155 ------YAARYTP--GVLKD--------DFLWFNL------GHRDFPLIIIIAALYYFQS 192 Query: 503 -IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + ++ P K A + MP++ +F S PA +I+YW + SI+QQ + Sbjct: 193 WLSIQQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWLVGGIFSIIQQLI 246 >gi|113953629|ref|YP_731297.1| inner membrane protein translocase component YidC [Synechococcus sp. CC9311] gi|113880980|gb|ABI45938.1| Inner membrane protein oxaA [Synechococcus sp. CC9311] Length = 382 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 64/113 (56%), Gaps = 10/113 (8%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---Q 405 ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + + + + K Sbjct: 13 ILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEIKARYA 72 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + PQ Q + +L K +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 73 NDPQKQQAELGKLMKEFG-SPLAGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|291457891|ref|ZP_06597281.1| membrane protein OxaA [Oribacterium sp. oral taxon 078 str. F0262] gi|291419435|gb|EFE93154.1| membrane protein OxaA [Oribacterium sp. oral taxon 078 str. F0262] Length = 436 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 61/101 (60%), Gaps = 6/101 (5%) Query: 353 FYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ- 409 F + +G N G+AI+L T+ ++L FP + KQ S+ M+ +QP+I ++EK+K Sbjct: 35 FLDRIGIPNIGLAIILFTLVTRILLFPTSLKQQKSSRMMQVMQPEIKAIQEKYKNKSDNA 94 Query: 410 ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 Q M +Y+ + + +GC P++LQ+P+ FA+Y++I Sbjct: 95 SMMAQQTEMKAVYEKYGTSMTSGCLPLVLQLPIIFALYRII 135 >gi|73748802|ref|YP_308041.1| putative inner membrane protein, 60 kDa [Dehalococcoides sp. CBDB1] gi|289432822|ref|YP_003462695.1| membrane protein insertase, YidC/Oxa1 family [Dehalococcoides sp. GT] gi|73660518|emb|CAI83125.1| putative inner membrane protein, 60 kDa [Dehalococcoides sp. CBDB1] gi|288946542|gb|ADC74239.1| membrane protein insertase, YidC/Oxa1 family [Dehalococcoides sp. GT] Length = 315 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 17/227 (7%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W I PM M + +NL G+FG+ +++ TV ++L +PL +KQ +T M+ I + Sbjct: 7 WDLIILSPMINGMVWLSHNLWGSFGLTVIVLTVVIRLALWPLNRKQLTATKKMQEITVHM 66 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 D L++K + Q L + ++LYK ++ P+L+Q P++ A+Y+ I L + Sbjct: 67 DALKKKHG-NDRQKLAEEQMKLYKESGVSTTGCLVPMLIQFPIWIALYQAIVRVLAVTPE 125 Query: 457 PFWGWIKDLAAADPTNIFTL-----FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 F L + P TL F + F + +++ L MF+Q KMS P Sbjct: 126 DFMNLSNHLYSW-PVVYETLPLSNNFLWMDLSRSDF----VLALLVGLGMFVQQKMSTPK 180 Query: 512 A-DKGQA----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 A ++ QA M+ MP +F F SFP+GL YW S V+ I+ Q Sbjct: 181 AINQQQAAQSQMLSFMMPFMFFFFSLSFPSGLAFYWFVSAVVGIIMQ 227 >gi|78212127|ref|YP_380906.1| putative inner membrane protein translocase component YidC [Synechococcus sp. CC9605] gi|78196586|gb|ABB34351.1| putative inner membrane protein; similar to 60 kDa inner membrane protein family [Synechococcus sp. CC9605] Length = 376 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 66/114 (57%), Gaps = 12/114 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID----ELREKFK 404 ++ +FY LV ++G+AI+ T+ +++ +PL+ S M+ QP I E+R ++ Sbjct: 13 ILDFFYGLVPSYGLAIVALTLVIRIALYPLSAGSIRSARRMRIAQPVIQKRQAEIRSRYA 72 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + PQ LQ+ + + K +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 73 NN-PQKLQEELGNVMKEFG-SPLAGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|55822232|ref|YP_140673.1| OxaA-like protein precursor [Streptococcus thermophilus CNRZ1066] gi|55738217|gb|AAV61858.1| hypothetical protein, SpoIIIJ family protein [Streptococcus thermophilus CNRZ1066] Length = 305 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 108/234 (46%), Gaps = 37/234 (15%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVS----TANMK 390 GW + + +PM +++YF N +G FG+ I+ T+ V+ + PL Q S +A + Sbjct: 35 GWVWNLLGRPMSHVITYFANNLGLGFGLGIIFVTIIVRSIILPLGLHQSRSAAYQSAKRE 94 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 + P ++ + E+ + + Q Q ++Q + + ++ + G C P+L+Q P F A+Y Sbjct: 95 YLAPILEPINERLRNAKTQEEKMAAQSELMQAQRENGLSLMGGIGCLPLLIQFPFFSALY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF-- 502 R+ P G +KD F F + G + II +L F Sbjct: 155 ------YAARYTP--GVLKD--------DFLWFNL------GHRDFPLIIIIAALYYFQS 192 Query: 503 -IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + ++ P K A + MP++ +F S PA +I+YW + SI+QQ + Sbjct: 193 WLSIQQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWLVGGIFSIIQQLI 246 >gi|322373859|ref|ZP_08048394.1| membrane protein [Streptococcus sp. C150] gi|321277231|gb|EFX54301.1| membrane protein [Streptococcus sp. C150] Length = 305 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 47/239 (19%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPL------------AKKQ 382 GW + + +PM +++YF N +G FG+ I+ T+ V+L+ PL AK++ Sbjct: 35 GWVWNLLGRPMSHIITYFANNLGLGFGLGIVFVTIIVRLIILPLGLHQSRGAAYQAAKRE 94 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 Y++ ++P + LR Q Q ++Q + + ++ + G C P+L+Q+P F Sbjct: 95 YLAPI----LEPINERLRNAETQEEKMAAQSELMQAQRENGVSLMGGVGCLPLLIQLPFF 150 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y + + H F W +L + D P + II +L Sbjct: 151 SALYYAARYTPGVLHDHFL-WF-NLNSRD----------FPLII----------IIAALY 188 Query: 501 MF---IQMKMSPPPADKGQAMILNWMPVVF-VFALSSFPAGLIIYWSWSNVISIVQQAV 555 F + ++ P K A+ + MP++ VF +SS PA +I+YW + SI+QQ + Sbjct: 189 YFQSWLSIQQVPEEQRKQMAVTMYSMPIMMIVFGISS-PAAVILYWFVGGIFSIIQQLI 246 >gi|123968912|ref|YP_001009770.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. AS9601] gi|123199022|gb|ABM70663.1| Putative inner membrane protein [Prochlorococcus marinus str. AS9601] Length = 380 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 17/125 (13%) Query: 341 FIAKPMFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP----K 395 FI++ + + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP K Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKK 63 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHN--INPLAGCWPILLQIPVFFAIYKVISISLEM 453 E++ KF P +K +L K N +PLAGC P+++Q+PV FA++ + Sbjct: 64 QAEIKSKFSGDP----KKQQEELGKLMNEFGSPLAGCLPLIVQMPVLFALFAT------L 113 Query: 454 RHAPF 458 R +PF Sbjct: 114 RGSPF 118 >gi|313884144|ref|ZP_07817910.1| membrane protein insertase, YidC/Oxa1 family [Eremococcus coleocola ACS-139-V-Col8] gi|312620591|gb|EFR32014.1| membrane protein insertase, YidC/Oxa1 family [Eremococcus coleocola ACS-139-V-Col8] Length = 314 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 119/240 (49%), Gaps = 48/240 (20%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFP----LAKKQYVSTANMK 390 G+FY +I P + + ++ G ++GIAI++ T+ ++ P + K S A MK Sbjct: 35 GFFYEYIGIPTSHFLDWLAHIFGGSYGIAIIIVTLITRIFMIPSTLKMTKGSMTSAAKMK 94 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPL---AGCWPILLQIPVFFAI 443 QP+I+E++ + + + LQ+ ++ +YK ++IN L +GC P+L+Q+P+ A+ Sbjct: 95 VAQPEINEIQAEIEAATSDQEKMQLQQELMTVYKKYDINMLGGVSGCLPLLIQMPIISAV 154 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S ++++ F G N+ G +GI ++ + FI Sbjct: 155 YAAIRSSEAIKNSHFLG----------INL------------GERSLGIVIAVVIIG-FI 191 Query: 504 QMKMSP---PPADKGQA-------MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 Q +S P +D QA M++N + + ++ +S+ AGL IY+ ++ SI QQ Sbjct: 192 QGWLSTKAMPASDNPQAQQTSKSMMLINPLMIGYITYISA--AGLGIYFLVGSIFSIFQQ 249 >gi|222153767|ref|YP_002562944.1| membrane protein OxaA 1 [Streptococcus uberis 0140J] gi|222114580|emb|CAR43555.1| membrane protein OxaA 1 precursor [Streptococcus uberis 0140J] Length = 270 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 25/200 (12%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQKA 414 G+ GI I+L T+ +++L PL Q S+ M++IQP++ +L+ K+ + L + Sbjct: 51 GSIGIGIILFTLLIRILLMPLFNMQMKSSQKMQDIQPELKKLQMKYPGKDTESRMALAEE 110 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK H +NP A P+L+Q+PV A+++ ++ ++ F W+ LA DP Sbjct: 111 SQALYKAHGVNPYASMLPLLIQMPVMIALFQALTRVPFLKTGTFM-WV-SLAQHDP---- 164 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-ILNWMPVVFVFALS- 532 + ILP + W ++ +K M I+ +M + +F + Sbjct: 165 --YFILPVLAAVLTFLSTWLTNLA------------AREKNVVMTIMTYMMPIMIFLMGF 210 Query: 533 SFPAGLIIYWSWSNVISIVQ 552 +G+++YW SN + Q Sbjct: 211 KLASGVVLYWVVSNAFQVFQ 230 >gi|289550293|ref|YP_003471197.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] gi|315660247|ref|ZP_07913102.1| SpoJ family protein [Staphylococcus lugdunensis M23590] gi|289179825|gb|ADC87070.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] gi|315494674|gb|EFU83014.1| SpoJ family protein [Staphylococcus lugdunensis M23590] Length = 291 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 31/207 (14%) Query: 359 NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++G+AI++ + ++++ P K ++ MK +P++ E++EK K++ Q + A Sbjct: 55 DYGLAIIVLVLVIRIVLLPFMLSNYKNSHMMREKMKVAKPEVSEVQEKVKRARTQEEKMA 114 Query: 415 ----MIQLYKTHNINPLA---GCWPILLQIPVFFAIYKVI--SISLEMRHAPFWGWIKDL 465 M+Q+YK ++INP+A GC P+L+Q+P+ +Y V+ I + H P + W +L Sbjct: 115 ANQEMMQVYKKYDINPMASMLGCLPVLIQMPIVMGLYFVLRYQIGGGITHHPHFLWF-NL 173 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 D I + G+L F + +I K P + M++ P+ Sbjct: 174 VKPD-IWITAIAGVLYF----------------IQSYISTKTMPDEQRQMAYMMMIVSPI 216 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ A L +YWS S IVQ Sbjct: 217 MIIWISYQSAAALGLYWSVSAAFLIVQ 243 >gi|167759573|ref|ZP_02431700.1| hypothetical protein CLOSCI_01930 [Clostridium scindens ATCC 35704] gi|167662800|gb|EDS06930.1| hypothetical protein CLOSCI_01930 [Clostridium scindens ATCC 35704] Length = 360 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 119/245 (48%), Gaps = 31/245 (12%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI-QPKIDELREKFKQSPPQV----LQ 412 G G++I++ T+ V PL KQ TA M ++ P++ +++K+K Q Q Sbjct: 46 GLVGLSIIIYTILVYTCMMPLTIKQQ-RTAKMSSVMNPELQAIQKKYKNKRDQASMLKQQ 104 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI----SISLEMRHAP----FWGWIKD 464 + M Q+Y + + GC P+L+Q+P FA+Y VI + +++AP + I + Sbjct: 105 EEMQQVYDKYGTSMTGGCLPLLIQMPFLFALYPVIYDIQTYVPAIKNAPDAVNRFITIPN 164 Query: 465 LAAADPTNIFTLFGILPFYLPG---FMHVGIWPIIMSLSMFIQMKMSPPPA----DK--- 514 L + PT + G + LP + + PII L+ ++ +++S + DK Sbjct: 165 LTVS-PTVMIKNSG--DYGLPAAVIIVTAILLPIISGLTQYLSIRLSQSISGQQLDKDNP 221 Query: 515 --GQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 G +N MP+ +F + + P G+ +YW S V+ VQQ +I K H +++ + D + Sbjct: 222 MAGTMKTMNMTMPLFSIFMVFTLPTGIGLYWIISAVVRCVQQLMINK-HLSKMSVDDLIE 280 Query: 572 STFSK 576 K Sbjct: 281 KNREK 285 >gi|290579922|ref|YP_003484314.1| putative inner membrane protein [Streptococcus mutans NN2025] gi|254996821|dbj|BAH87422.1| putative inner membrane protein [Streptococcus mutans NN2025] Length = 284 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 72/255 (28%), Positives = 116/255 (45%), Gaps = 37/255 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMK 390 GW Y F A PM ++ Y N +G FG AI++ TV V+LL PL +K + M Sbjct: 10 GWVYKFFAAPMGSVIQYLANNLGLGFGFAIIIVTVIVRLLILPLGLSQVRKMTYQSEKMA 69 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 ++P D ++E+ K + Q Q ++Q + + ++ GC P+L+Q+P F A+Y Sbjct: 70 YLKPVFDPIQERMKNAKTQEEKMAAQTELMQAQRHYGMSMFGGLGCLPLLIQMPFFSALY 129 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFT-LFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + + A F G + P I T + GIL YL V W +S+ Sbjct: 130 ISTRYTKGIASASFLG----IKLGSPNMIITVIIGIL--YL-----VQSWVSTLSV---- 174 Query: 504 QMKMSPPPADKGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P A + Q ++ MP++ V PAG +YW S + ++QQ ++ H Sbjct: 175 ------PEAQRQQTRNMMFMMPIMMVMISIGAPAGGALYWLVSGIFGLIQQ--LITNHII 226 Query: 563 EIGLIDRLRSTFSKN 577 + L ++ F KN Sbjct: 227 KPKLRKQIDEEFKKN 241 >gi|254525383|ref|ZP_05137435.1| inner membrane protein OxaA [Prochlorococcus marinus str. MIT 9202] gi|221536807|gb|EEE39260.1| inner membrane protein OxaA [Prochlorococcus marinus str. MIT 9202] Length = 380 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 17/125 (13%) Query: 341 FIAKPMFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP----K 395 FI++ + + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP K Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKK 63 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNI--NPLAGCWPILLQIPVFFAIYKVISISLEM 453 E++ KF P +K +L K N +PLAGC P+++Q+PV FA++ + Sbjct: 64 QAEIKSKFSGDP----KKQQEELGKLMNEFGSPLAGCLPLIVQMPVLFALFAT------L 113 Query: 454 RHAPF 458 R +PF Sbjct: 114 RGSPF 118 >gi|154486340|ref|ZP_02027747.1| hypothetical protein BIFADO_00149 [Bifidobacterium adolescentis L2-32] gi|154084203|gb|EDN83248.1| hypothetical protein BIFADO_00149 [Bifidobacterium adolescentis L2-32] Length = 344 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/262 (22%), Positives = 121/262 (46%), Gaps = 46/262 (17%) Query: 336 WGWFYFIAKP----MFMLMSYFYNLVGNFGI---------AIMLTTVFVKLLFFPL---- 378 WGW Y + P M +M+ F+ + G+ +I+ + V+ FPL Sbjct: 13 WGWLYKLLYPVEWLMTQIMAGFHRFMVMLGMNEIGFSWVMSIVFLVIVVQACVFPLFYKS 72 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGC---W 431 K A M +QPK+ ++ K+K + + LQ+ M++LY+ ++ NP+ GC Sbjct: 73 MKGMRKMQAQMAVLQPKMQRIQNKYKGKNDPASKEALQREMMKLYQDNDANPMGGCTSML 132 Query: 432 PILLQIPVFFAIYKVISI-----SLEMRHAPFWGWIKDLAAADPTNIFTLFGI------L 480 P+ +Q PVF ++ +S + R+ G D+A A +FG+ Sbjct: 133 PMFVQGPVFMCMFYTLSAIPYIARGKFRNGSGLGAF-DIATAKQFTSTNVFGVNVAENFT 191 Query: 481 PFYLPGFMHVGIWPIIMSLSMFI------QMKMSPPPADKG----QAMILNWMPVVFVFA 530 + G + +GI+ +M +++ + M+ A+K Q M+L P++++F+ Sbjct: 192 TADIHGKIIIGIFVALMCFCLWLMQYNSMKRNMAQSAANKQTEMMQKMMLWMFPIMYIFS 251 Query: 531 LSSFPAGLIIYWSWSNVISIVQ 552 + P +++YW +N+ ++++ Sbjct: 252 GVAMPFAVLVYWLTNNICNLLR 273 >gi|149003816|ref|ZP_01828644.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69] gi|147758150|gb|EDK65153.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69] Length = 274 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 26/216 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YF AK + F + + G+ I+L TV + + P+ + Q V++ M+ QP+I L Sbjct: 43 YFFAKII-----RFLSFDISIGVGIILFTVLICTVLLPVFQVQMVASRKMQEAQPRIKAL 97 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 RE++ L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 98 REQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTG 157 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 F WI +L + D T +LP F + W + K Sbjct: 158 HFL-WI-NLGSVDTTL------VLPILAAVFTFLSTW---------LSNKALSERNGATT 200 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 AM+ ++F+FA+ + P G+ +YW+ SN ++Q Sbjct: 201 AMMYGIPVLIFIFAVYA-PGGVALYWTVSNAYQVLQ 235 >gi|254431771|ref|ZP_05045474.1| inner membrane protein OxaA [Cyanobium sp. PCC 7001] gi|197626224|gb|EDY38783.1| inner membrane protein OxaA [Cyanobium sp. PCC 7001] Length = 379 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 65/113 (57%), Gaps = 10/113 (8%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ--- 405 ++ +FY LV ++G+AI+ TV ++L FPL+ + M+ QP + + + + K Sbjct: 13 ILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRNARRMRIAQPVMQKRQAEIKSRYA 72 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + PQ Q+ + +L K +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 73 NNPQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|239931058|ref|ZP_04688011.1| membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291439429|ref|ZP_06578819.1| membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291342324|gb|EFE69280.1| membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 239 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T V+LL PL++ +QPKI ELR + +P + LQ+A++ L+ Sbjct: 28 IVLFTALVRLLVHPLSRAAARGQKARAALQPKIAELRRRHGGNPEK-LQRAVLDLHAREK 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVIS 448 ++PL+GC P L Q+P FF +Y + S Sbjct: 87 VSPLSGCLPSLFQLPAFFLLYHLFS 111 >gi|24380099|ref|NP_722054.1| OxaA-like protein precursor [Streptococcus mutans UA159] gi|38503007|sp|Q8DSP8|OXAA2_STRMU RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|24378095|gb|AAN59360.1|AE015001_5 putative inner membrane protein [Streptococcus mutans UA159] Length = 310 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 107/233 (45%), Gaps = 35/233 (15%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMK 390 GW Y F A PM ++ Y N +G FG AI++ TV V+LL PL +K + M Sbjct: 36 GWVYKFFAAPMGSVIQYLANNLGLGFGFAIIIVTVIVRLLILPLGLSQVRKMTYQSEKMA 95 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 ++P D ++E+ K + Q Q ++Q + + ++ GC P+L+Q+P F A+Y Sbjct: 96 YLKPVFDPIQERMKNAKTQEEKMAAQTELMQAQRHYGMSMFGGLGCLPLLIQMPFFSALY 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFT-LFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + + A F G + P I T + GIL YL V W +S+ Sbjct: 156 ISTRYTKGIASASFLG----IKLGSPNMIITVIIGIL--YL-----VQSWVSTLSV---- 200 Query: 504 QMKMSPPPADKGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P A + Q ++ MP++ V PAG +YW S + ++QQ + Sbjct: 201 ------PEAQRQQTRNMMFMMPIMMVMISIGAPAGGALYWLVSGIFGLIQQLI 247 >gi|148271706|ref|YP_001221267.1| hypothetical protein CMM_0527 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829636|emb|CAN00552.1| putative membrane protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 255 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 7/108 (6%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+A++L T+ V+ L P+ Q + + I P + ELR + P Q L +A +LY Sbjct: 37 GVAVILLTLGVRALLVPVGVAQVRAEIQRRRIAPALAELRRRHAGKPEQ-LSRATQELYA 95 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +PLAGC P L Q PV A+Y + + HA G L AA Sbjct: 96 REGASPLAGCLPTLAQAPVLAAVYALFA------HARIGGEANALLAA 137 >gi|328464786|gb|EGF36101.1| hypothetical protein AAULH_09168 [Lactobacillus helveticus MTCC 5463] Length = 320 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 110/236 (46%), Gaps = 34/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +GW Y ++ +P+ +M + ++VG + G I++ TV V+L+ PL K Sbjct: 39 YGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ---SPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K +P Q L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + I T+F ++ Y+ +GI Sbjct: 159 WGIYQAVFYSPQLAHSTFFGISLSQKSVVLAIIATIFTVIQGYIS---LIGI-------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K ++ + P++ +F SF L +YW+ N++ I+QQ ++ Sbjct: 208 --------PEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLVMIIQQVIV 255 >gi|323466128|gb|ADX69815.1| Preprotein translocase subunit YidC [Lactobacillus helveticus H10] Length = 324 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 110/236 (46%), Gaps = 34/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +GW Y ++ +P+ +M + ++VG + G I++ TV V+L+ PL K Sbjct: 43 YGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQNKSVRQQE 102 Query: 388 NMKNIQPKIDELREKFKQ---SPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K +P Q L +LY + ++ G C P+++Q+P+ Sbjct: 103 KMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLPLIIQLPIM 162 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + I T+F ++ Y+ +GI Sbjct: 163 WGIYQAVFYSPQLAHSTFFGISLSQKSVVLAIIATIFTVIQGYIS---LIGI-------- 211 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K ++ + P++ +F SF L +YW+ N++ I+QQ ++ Sbjct: 212 --------PEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLVMIIQQVIV 259 >gi|319758802|gb|ADV70744.1| preprotein translocase subunit YidC [Streptococcus suis JS14] Length = 326 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 33/231 (14%) Query: 336 WGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMK 390 W W + +PM L+ +F + FG+AI++ T+ V+ + PL K + + M Sbjct: 59 WDW---LGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMN 115 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPLAG--CWPILLQIPVFFAIY 444 ++P + ++E+ K + Q Q A Q Y K + ++ L G C P+L+Q+P F AIY Sbjct: 116 YLKPILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIY 175 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A F G + + I T+ + +Y + S+ +Q Sbjct: 176 FAARHTPGISEATFLG----INLGSTSLILTVVAGILYY--------------AQSLLMQ 217 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + M + + M L ++ +F+ S PAG+ +YW + I+QQA+ Sbjct: 218 VGMDEEQKKQMKTMALMNPIMIMMFSFGS-PAGVTLYWVVGGLFGILQQAI 267 >gi|262281818|ref|ZP_06059587.1| membrane protein oxaA 1 [Streptococcus sp. 2_1_36FAA] gi|262262272|gb|EEY80969.1| membrane protein oxaA 1 [Streptococcus sp. 2_1_36FAA] Length = 271 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 27/210 (12%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + + GI I+L T+ ++ + P+ + Q S+ M+ QP I L+ K+ Sbjct: 47 FLSFNSSLGIGIILFTIVIRTVLLPVFQIQMNSSRKMQEAQPHIKALQAKYPGKDMESRN 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 +L +LYK +NPLA P+ +Q+PV A+++ ++ M+ F W+ +LA D Sbjct: 107 LLATETQKLYKELGVNPLASFIPLFIQMPVLLALFQALTRVEFMKTGHFL-WL-NLAEKD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN--WMP-VV 526 P + ILP F + W L A+K AM + MP ++ Sbjct: 165 P------YFILPVLAALFTFLSSWLNNKGL------------AEKNGAMTVMTYLMPLLI 206 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 F FAL SF +G+ +YW+ SN + Q V+ Sbjct: 207 FWFAL-SFSSGVALYWTVSNAYQVGQTLVL 235 >gi|257437741|ref|ZP_05613496.1| stage III sporulation protein J [Faecalibacterium prausnitzii A2-165] gi|257200048|gb|EEU98332.1| stage III sporulation protein J [Faecalibacterium prausnitzii A2-165] Length = 360 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 53/276 (19%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 Y + P+ +M + Y L+ N+G I+L T+ + ++ PL Q S A M QP + E Sbjct: 8 LYILGWPLGYVMEWIYKLIPNYGWDIILFTLLITVIKIPLQLNQQKSMARMSAFQPMVAE 67 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI----------- 447 +++K++ P + Q+ + + P AGC P+L+ V F + +V+ Sbjct: 68 IQKKYRDKPEK--QQEELMKLQEQGYKPTAGCMPMLVNFLVMFGVIEVVYRPLQRIFHIG 125 Query: 448 -------SISLEMRHAPFWGWIKDL--------------AAADPTNIFTL---------F 477 +L F +D + P + T+ F Sbjct: 126 ADALTAAGEALTAMGISFTTVTRDTNIIAQVISGESTVSSCFTPDQVATITEFGQHMDFF 185 Query: 478 GILPFYLPGF------MHVGIWPIIMSLSMF----IQMKMSPPPADKGQAMILNWMPVVF 527 GI +P + + + I P++ ++MF I MK S + + MP+++ Sbjct: 186 GIDLTRVPQYSLAAENLPLLILPVLAIVTMFLSTHISMKASGQEMQGSMKLTMYMMPLMY 245 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 VF + P+ +Y+ SN++ VQ ++ K++ E Sbjct: 246 VFFCFTVPSAFSLYYVVSNILMTVQSLLMKKIYDPE 281 >gi|318040384|ref|ZP_07972340.1| putative inner membrane protein translocase component YidC [Synechococcus sp. CB0101] Length = 378 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 12/114 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID----ELREKFK 404 ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + E++ K+ Sbjct: 13 ILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEIKAKYA 72 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + PQ Q+ + L K +PL+GC P+L+Q+P+ FA++ +R +PF Sbjct: 73 NN-PQKQQEELGSLMKEFG-SPLSGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|33861742|ref|NP_893303.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|38502915|sp|Q7V0R8|OXAA_PROMP RecName: Full=Inner membrane protein oxaA gi|33640110|emb|CAE19645.1| Putative inner membrane protein; similar to 60 kDa inner membrane protein family [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 379 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 17/125 (13%) Query: 341 FIAKPMFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID-- 397 FI++ + + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP + Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKR 63 Query: 398 --ELREKFKQSPPQVLQKAMIQLYKTHN--INPLAGCWPILLQIPVFFAIYKVISISLEM 453 E++ KF P +K +L K N +PLAGC P+++Q+PV FA++ + Sbjct: 64 QAEIKSKFSSDP----KKQQEELGKLMNEFGSPLAGCLPLIVQMPVLFALFAT------L 113 Query: 454 RHAPF 458 R +PF Sbjct: 114 RGSPF 118 >gi|260103137|ref|ZP_05753374.1| membrane protein OxaA [Lactobacillus helveticus DSM 20075] gi|260083047|gb|EEW67167.1| membrane protein OxaA [Lactobacillus helveticus DSM 20075] Length = 320 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 110/236 (46%), Gaps = 34/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +GW Y ++ +P+ +M + ++VG + G I++ TV V+L+ PL K Sbjct: 39 YGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ---SPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K +P Q L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + I T+F ++ Y+ +GI Sbjct: 159 WGIYQAVFYSPQLAHSTFFGISLSQKSVVLAIIATIFTVIQGYIS---LIGI-------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K ++ + P++ +F SF L +YW+ N++ I+QQ ++ Sbjct: 208 --------PEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLVMIIQQVIV 255 >gi|306834432|ref|ZP_07467546.1| stage III sporulation protein J [Streptococcus bovis ATCC 700338] gi|304423418|gb|EFM26570.1| stage III sporulation protein J [Streptococcus bovis ATCC 700338] Length = 271 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 104/224 (46%), Gaps = 33/224 (14%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF AK + + ++ G G+ I+L T+ ++ + PL Q S M+++Q Sbjct: 33 GWDQIVYFFAKAI-----QWLSINGRIGVGIVLFTIIIRAIMMPLYNMQIKSGQKMQDLQ 87 Query: 394 PKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ +L+EK+ L + LYK + +NP A P+++Q+P+ A+Y+ ++ Sbjct: 88 PELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVVQLPILMALYQALTRV 147 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 ++ F WI +L+ DP + ILP F + W + Sbjct: 148 AFLKTGTFL-WI-ELSKPDP------YFILPVLAALFTFLSSWLT------------NKA 187 Query: 511 PADKGQAM-ILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +K AM ++ + MP++ F +G+++YWS S + Q Sbjct: 188 AREKNIAMTVMTYVMPIMIFFMSFRLASGVVLYWSVSYAFQVFQ 231 >gi|146319369|ref|YP_001199081.1| preprotein translocase subunit YidC [Streptococcus suis 05ZYH33] gi|145690175|gb|ABP90681.1| Preprotein translocase subunit YidC [Streptococcus suis 05ZYH33] Length = 326 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 33/231 (14%) Query: 336 WGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMK 390 W W + +PM L+ +F + FG+AI++ T+ V+ + PL K + + M Sbjct: 59 WDW---LGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMN 115 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPLAG--CWPILLQIPVFFAIY 444 ++P + ++E+ K + Q Q A Q Y K + ++ L G C P+L+Q+P F AIY Sbjct: 116 YLKPILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIY 175 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A F G + + I T+ + +Y + S+ +Q Sbjct: 176 FAARHTPGISEATFLG----INLGSTSLILTVVAGILYY--------------AQSLLMQ 217 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + M + + M L ++ +F+ S PAG+ +YW + I+QQA+ Sbjct: 218 VGMDEEQKKQMKTMALMNPIMIMMFSFGS-PAGVTLYWVVGGLFGILQQAI 267 >gi|119026646|ref|YP_910491.1| membrane protein oxaA [Bifidobacterium adolescentis ATCC 15703] gi|118766230|dbj|BAF40409.1| membrane protein oxaA [Bifidobacterium adolescentis ATCC 15703] Length = 345 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 60/262 (22%), Positives = 121/262 (46%), Gaps = 46/262 (17%) Query: 336 WGWFYFIAKP----MFMLMSYFYNLVGNFGI---------AIMLTTVFVKLLFFPL---- 378 WGW Y + P M +M+ F+ + G+ +I+ + V+ FPL Sbjct: 13 WGWLYKLLYPVEWLMTQIMAGFHRFMVMLGMNEIGFSWVMSIVFLVIVVQACVFPLFYKS 72 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGC---W 431 K A M +QPK+ ++ K+K + + LQ+ M++LY+ ++ NP+ GC Sbjct: 73 MKGMRKMQAQMAVLQPKMQRIQNKYKGKNDPASKEALQREMMKLYQDNDANPMGGCTSML 132 Query: 432 PILLQIPVFFAIYKVISI-----SLEMRHAPFWGWIKDLAAADPTNIFTLFGI------L 480 P+ +Q PVF ++ +S + R+ G D+A A +FG+ Sbjct: 133 PMFVQGPVFMCMFYTLSAIPYIARGKFRNGSGLGAF-DIATAKQFTSTNVFGVNVAENFT 191 Query: 481 PFYLPGFMHVGIWPIIMSLSMFI------QMKMSPPPADKG----QAMILNWMPVVFVFA 530 + G + +GI+ +M +++ + M+ A+K Q M+L P++++F+ Sbjct: 192 TADIHGKIIIGIFVALMCFCLWLMQYNSMKRNMAQSAANKQTEMMQKMMLWMFPIMYIFS 251 Query: 531 LSSFPAGLIIYWSWSNVISIVQ 552 + P +++YW +N+ ++++ Sbjct: 252 GVAMPFAVLVYWLTNNICNLLR 273 >gi|253752397|ref|YP_003025538.1| membrane protein OxaA 2 precursor [Streptococcus suis SC84] gi|253754223|ref|YP_003027364.1| membrane protein OxaA 2 precursor [Streptococcus suis P1/7] gi|253756157|ref|YP_003029297.1| membrane protein OxaA 2 precursor [Streptococcus suis BM407] gi|251816686|emb|CAZ52327.1| membrane protein OxaA 2 precursor [Streptococcus suis SC84] gi|251818621|emb|CAZ56455.1| membrane protein OxaA 2 precursor [Streptococcus suis BM407] gi|251820469|emb|CAR47193.1| membrane protein OxaA 2 precursor [Streptococcus suis P1/7] Length = 304 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 33/231 (14%) Query: 336 WGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMK 390 W W + +PM L+ +F + FG+AI++ T+ V+ + PL K + + M Sbjct: 37 WDW---LGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMN 93 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPLAG--CWPILLQIPVFFAIY 444 ++P + ++E+ K + Q Q A Q Y K + ++ L G C P+L+Q+P F AIY Sbjct: 94 YLKPILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIY 153 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A F G + + I T+ + +Y + S+ +Q Sbjct: 154 FAARHTPGISEATFLG----INLGSTSLILTVVAGILYY--------------AQSLLMQ 195 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + M + + M L ++ +F+ S PAG+ +YW + I+QQA+ Sbjct: 196 VGMDEEQKKQMKTMALMNPIMIMMFSFGS-PAGVTLYWVVGGLFGILQQAI 245 >gi|223933720|ref|ZP_03625694.1| 60 kDa inner membrane insertion protein [Streptococcus suis 89/1591] gi|330833337|ref|YP_004402162.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3] gi|223897601|gb|EEF63988.1| 60 kDa inner membrane insertion protein [Streptococcus suis 89/1591] gi|329307560|gb|AEB81976.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3] Length = 304 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 33/231 (14%) Query: 336 WGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMK 390 W W + +PM L+ +F + FG+AI++ T+ V+ + PL K + + M Sbjct: 37 WDW---LGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMN 93 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPLAG--CWPILLQIPVFFAIY 444 ++P + ++E+ K + Q Q A Q Y K + ++ L G C P+L+Q+P F AIY Sbjct: 94 YLKPILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIY 153 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A F G + + I T+ + +Y + S+ +Q Sbjct: 154 FAARHTPGISEATFLG----INLGSTSLILTVVAGILYY--------------AQSLLMQ 195 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + M + + M L ++ +F+ S PAG+ +YW + I+QQA+ Sbjct: 196 VGMDEEQKKQMKTMALMNPIMIMMFSFGS-PAGVTLYWVVGGLFGILQQAI 245 >gi|161507844|ref|YP_001577808.1| hypothetical protein lhv_1585 [Lactobacillus helveticus DPC 4571] gi|160348833|gb|ABX27507.1| hypothetical protein lhv_1585 [Lactobacillus helveticus DPC 4571] Length = 320 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 110/236 (46%), Gaps = 34/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +GW Y ++ +P+ +M + ++VG + G I++ TV V+L+ PL K Sbjct: 39 YGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ---SPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K +P Q L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + I T+F ++ Y+ +GI Sbjct: 159 WGIYQAVFYSPQLAHSTFFGISLSQKSVVLAIIATIFTVIQGYIS---LIGI-------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K ++ + P++ +F SF L +YW+ N++ I+QQ ++ Sbjct: 208 --------PEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLVMIIQQVIV 255 >gi|288906262|ref|YP_003431484.1| hypothetical protein GALLO_2078 [Streptococcus gallolyticus UCN34] gi|306832308|ref|ZP_07465462.1| stage III sporulation protein J [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325979273|ref|YP_004288989.1| hypothetical protein SGGBAA2069_c20730 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732988|emb|CBI14569.1| conserved hypothetical membrane protein [Streptococcus gallolyticus UCN34] gi|304425747|gb|EFM28865.1| stage III sporulation protein J [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325179201|emb|CBZ49245.1| unnamed protein product [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 271 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 108/224 (48%), Gaps = 33/224 (14%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF AK + + ++ G G+ I+L T+ ++ + PL Q S M+++Q Sbjct: 33 GWDQIVYFFAKAI-----QWLSINGRIGVGIVLFTIIIRAIMMPLYNMQIKSGQKMQDLQ 87 Query: 394 PKIDELREKF--KQSPPQV-LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ +L+EK+ + + ++ L + LYK + +NP A P+++Q+P+ A+Y+ ++ Sbjct: 88 PELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVVQLPILMALYQALTRV 147 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 ++ F WI +L+ DP + ILP F + W + Sbjct: 148 AFLKTGTFL-WI-ELSKPDP------YFILPVLAALFTFLSSWLT------------NKA 187 Query: 511 PADKGQAM-ILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +K AM ++ + MP++ F +G+++YWS S + Q Sbjct: 188 AREKNIAMTVMTYVMPIMIFFMSFRLASGVVLYWSVSYAFQVFQ 231 >gi|241895504|ref|ZP_04782800.1| stage III sporulation protein J precursor [Weissella paramesenteroides ATCC 33313] gi|241871250|gb|EER75001.1| stage III sporulation protein J precursor [Weissella paramesenteroides ATCC 33313] Length = 277 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 25/199 (12%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAM 415 N+GI I++ T+ ++LL PL Q S M+ I P + +L+EK+ P Q +Q Sbjct: 62 NYGIGIIVFTLLIRLLILPLMVYQTGSMRKMQEIGPALKKLQEKYSSRDPETMQAMQAEQ 121 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 QLYK +NP A P+++Q+P+ A+Y I + + F+ W++ L DP Sbjct: 122 KQLYKDAGVNPFASFIPLIVQMPILIALYTAIRTTKLLETGTFF-WVQ-LGDRDP----- 174 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPV-VFVFALSS 533 + ILP F + ++M P G + + MP+ +F+FA+ S Sbjct: 175 -YFILPILAALFTFASSYLVMMG-----------QPEKNGMTTSMTYIMPIMIFIFAI-S 221 Query: 534 FPAGLIIYWSWSNVISIVQ 552 P+ L +YW SN + Q Sbjct: 222 VPSALSLYWVISNAFQVAQ 240 >gi|328479692|gb|EGF48851.1| preprotein translocase YidC [Lactobacillus rhamnosus MTCC 5462] Length = 208 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 18/161 (11%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVSTA---- 387 +G FY I P+ LM + VG+ +GIAI++ T+ V+L+ PL +Q +T Sbjct: 28 FGTFYKIIGLPLQHLMEWIAGFVGSTSSYGIAIIVITLLVRLIVLPLMLRQQRTTTAYQE 87 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNIN--PLAGCWPILLQIPVFF 441 K +QP++ +++ K++ Q A M ++Y + + P GC P+L+Q P+F Sbjct: 88 KQKILQPQLKIVQDAVKRAKTPEQQMAANNYMRKIYSANGTSMIPSMGCLPMLIQFPIFS 147 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +Y+ I+ S E+ HA F+G + + I T+ LP+ Sbjct: 148 GLYQAIAYSPEISHATFFG----IQLGHSSFIVTILATLPY 184 >gi|283797193|ref|ZP_06346346.1| SpoJ protein [Clostridium sp. M62/1] gi|291075151|gb|EFE12515.1| SpoJ protein [Clostridium sp. M62/1] Length = 414 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 4/95 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQ 412 V N G+ I+L T+ +LL FPL KQ S+ M + P+I +++K+K Q Q Sbjct: 36 VFNIGVCIILFTIITRLLLFPLTLKQQKSSKMMALMNPEIAAIQKKYKGKTDQTSMAKQQ 95 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M +Y+ + +P AGC P+L+Q P+ A+Y+VI Sbjct: 96 VEMKAVYEKYGSSPTAGCLPLLIQFPIILALYRVI 130 >gi|72382644|ref|YP_291999.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. NATL2A] gi|72002494|gb|AAZ58296.1| preprotein translocase subunit YidC [Prochlorococcus marinus str. NATL2A] Length = 382 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 10/113 (8%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ--- 405 ++ +FY LV ++G+AI+ T+ ++L FPL+ S MK QP + + + + K Sbjct: 13 ILDFFYGLVPSYGLAIVALTIVIRLALFPLSAGSIRSARRMKIAQPVMQKRQAEIKSRYA 72 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 S PQ Q+ + +L +PLAGC P+++Q+P+ FA++ +R +PF Sbjct: 73 SNPQKQQEELGKLMGEFG-SPLAGCLPLIVQMPILFALFAT------LRGSPF 118 >gi|124026366|ref|YP_001015482.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. NATL1A] gi|123961434|gb|ABM76217.1| Putative inner membrane protein [Prochlorococcus marinus str. NATL1A] Length = 382 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 10/113 (8%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ--- 405 ++ +FY LV ++G+AI+ T+ ++L FPL+ S MK QP + + + + K Sbjct: 13 ILDFFYGLVPSYGLAIVALTIVIRLALFPLSAGSIRSARRMKIAQPVMQKRQAEIKSRYA 72 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 S PQ Q+ + +L +PLAGC P+++Q+P+ FA++ +R +PF Sbjct: 73 SNPQKQQEELGKLMGEFG-SPLAGCLPLIVQMPILFALFAT------LRGSPF 118 >gi|227873164|ref|ZP_03991455.1| inner membrane insertion protein [Oribacterium sinus F0268] gi|227840995|gb|EEJ51334.1| inner membrane insertion protein [Oribacterium sinus F0268] Length = 442 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 4/95 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412 + N G+AI+L T+ ++L FP + KQ S+ M+ +QP+I ++EK+K Q Sbjct: 45 IPNIGLAIILFTLVTRILLFPTSLKQQKSSRMMQIMQPEIRAVQEKYKNKTDNASMMAQQ 104 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M +Y+ + + AGC P+ LQ+P+ FA+Y++I Sbjct: 105 TEMKAIYEKYGTSMTAGCLPLFLQMPIIFALYRII 139 >gi|126696725|ref|YP_001091611.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9301] gi|126543768|gb|ABO18010.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT 9301] Length = 380 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 17/125 (13%) Query: 341 FIAKPMFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID-- 397 FI++ + + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP + Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKR 63 Query: 398 --ELREKFKQSPPQVLQKAMIQLYKTHN--INPLAGCWPILLQIPVFFAIYKVISISLEM 453 E++ KF P +K +L K N +PLAGC P+++Q+PV FA++ + Sbjct: 64 QAEIKSKFSGDP----KKQQEELGKLMNEFGSPLAGCLPLIVQMPVLFALFAT------L 113 Query: 454 RHAPF 458 R +PF Sbjct: 114 RGSPF 118 >gi|228476491|ref|ZP_04061181.1| membrane protein OxaA 2 [Streptococcus salivarius SK126] gi|228251912|gb|EEK10958.1| membrane protein OxaA 2 [Streptococcus salivarius SK126] Length = 305 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 37/234 (15%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVS----TANMK 390 GW + + +PM +++YF + +G FG+ I+ T+ V+L+ PL Q S +A + Sbjct: 35 GWVWNLLGRPMSHVITYFADNLGLGFGLGIIFVTIIVRLIILPLGLHQSRSAAYQSAKRE 94 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 + P ++ + E+ + + Q Q ++Q + + ++ + G C P+L+Q P F A+Y Sbjct: 95 YLAPILEPINERLRNAETQEEKMAAQSELMQAQRENGLSLMGGVGCLPLLIQFPFFSALY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF-- 502 R+ P G ++D F F + G + II +L F Sbjct: 155 ------YAARYTP--GVLQD--------NFLWFNL------GHRDFPLIIIIAALYYFQS 192 Query: 503 -IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + ++ P K A + MP++ +F S PA +I+YW + SI+QQ + Sbjct: 193 WLSIQQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWFVGGIFSIIQQLI 246 >gi|123966591|ref|YP_001011672.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9515] gi|123200957|gb|ABM72565.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT 9515] Length = 379 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 17/125 (13%) Query: 341 FIAKPMFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID-- 397 FI++ + + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP + Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKR 63 Query: 398 --ELREKFKQSPPQVLQKAMIQLYKTHN--INPLAGCWPILLQIPVFFAIYKVISISLEM 453 E++ KF P +K +L K N +PLAGC P+++Q+PV FA++ + Sbjct: 64 QAEIKSKFSGDP----KKQQEELGKLMNEFGSPLAGCLPLIVQMPVLFALFAT------L 113 Query: 454 RHAPF 458 R +PF Sbjct: 114 RGSPF 118 >gi|91069870|gb|ABE10801.1| putative inner membrane protein [uncultured Prochlorococcus marinus clone ASNC1363] Length = 380 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 17/125 (13%) Query: 341 FIAKPMFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID-- 397 FI++ + + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP + Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKR 63 Query: 398 --ELREKFKQSPPQVLQKAMIQLYKTHNI--NPLAGCWPILLQIPVFFAIYKVISISLEM 453 E++ KF P +K +L K N +PLAGC P+++Q+PV FA++ + Sbjct: 64 QAEIKSKFSGDP----KKQQEELGKLMNEFGSPLAGCLPLIVQMPVLFALFAT------L 113 Query: 454 RHAPF 458 R +PF Sbjct: 114 RGSPF 118 >gi|157413735|ref|YP_001484601.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9215] gi|157388310|gb|ABV51015.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT 9215] Length = 380 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 17/125 (13%) Query: 341 FIAKPMFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP----K 395 FI++ + + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP K Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKK 63 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHN--INPLAGCWPILLQIPVFFAIYKVISISLEM 453 E++ KF P ++ +L K N +PLAGC P+++Q+PV FA++ + Sbjct: 64 QAEIKSKFSGDP----KRQQEELGKLMNEFGSPLAGCLPLIVQMPVLFALFAT------L 113 Query: 454 RHAPF 458 R +PF Sbjct: 114 RGSPF 118 >gi|217964474|ref|YP_002350152.1| membrane protein OxaA 2 [Listeria monocytogenes HCC23] gi|217333744|gb|ACK39538.1| membrane protein OxaA 2 [Listeria monocytogenes HCC23] gi|307570961|emb|CAR84140.1| inner membrane protein oxaA2 precursor [Listeria monocytogenes L99] Length = 275 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 35/238 (14%) Query: 358 GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQ---- 409 GN+GIAI++TT+ ++ L PL AK Q + M +P+IDE++ + K++ + Sbjct: 55 GNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQA 114 Query: 410 VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I S E+ F W +L + Sbjct: 115 TIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIAEHTFL-WF-NLGSP 172 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVF 527 D M + I ++ L+ + + P K Q I+ M P++ Sbjct: 173 D------------------MVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMI 214 Query: 528 VFALSSFPAGLIIYWSWSNVI----SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +F + P+ L +YW+ + +++ + + M H EI ++++ F + Q Sbjct: 215 LFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH-PEIKVMEQEEKEFEQIVEEQ 271 >gi|319938685|ref|ZP_08013049.1| membrane protein oxaA 2 [Streptococcus anginosus 1_2_62CV] gi|319811735|gb|EFW08001.1| membrane protein oxaA 2 [Streptococcus anginosus 1_2_62CV] Length = 305 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 32/227 (14%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 I +PM + + YF N +G FG+AI++ T+ V+L+ PL K + M ++P Sbjct: 39 IGRPMSLAIQYFANNMGLGFGVAIIIVTLIVRLIILPLGLYQSWKATYQSEKMNYLKPIF 98 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++E+ K + Q Q+A++ K + +N L G C P+L+Q+P F A+Y + Sbjct: 99 EPIQERMKNAETQEEKLAAQQALMAAQKENGVNMLGGIGCLPLLIQLPFFSALYFSAQYT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLF-GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + F G + + + T+ GIL F VG+ + M M MSP Sbjct: 159 EGVAKSVFLG----IPLGKASILLTIIVGILYFIQSALTLVGVDEV-QKEQMKKMMYMSP 213 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M V+F F + PAG+ +YW I I+QQ +I Sbjct: 214 ------------LMIVIFSF---TAPAGVTLYWVVGGFIMIIQQLII 245 >gi|313112582|ref|ZP_07798243.1| inner membrane protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310625104|gb|EFQ08398.1| inner membrane protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 137 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 1/115 (0%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +FY ++ P+ +M + Y L+ ++G I++ T+ + ++ PL Q S A M QP + Sbjct: 7 FFYILSGPLGYVMEWIYKLLPSYGWDIIIFTLLINIVKIPLQLSQQKSMAKMSAFQPMMM 66 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 E++ K+K P + Q+ M++L + + NP AGC P+LL V F + V+ LE Sbjct: 67 EIQTKYKDKPEKQ-QEEMLKLQQDYGYNPTAGCVPMLLNFLVMFGVIGVVYNPLE 120 >gi|33866422|ref|NP_897981.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 8102] gi|38502911|sp|Q7U522|OXAA_SYNPX RecName: Full=Inner membrane protein oxaA gi|33633200|emb|CAE08405.1| Putative inner membrane protein; similar to 60 kDa inner membrane protein family [Synechococcus sp. WH 8102] Length = 380 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 8/112 (7%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ +FY LV ++G+AI+ T+ +++ +PL+ S M+ QP I + + + K Sbjct: 13 ILDFFYGLVPSYGLAIVALTIVIRVALYPLSAGSIRSARRMRIAQPVIQKRQAEIKSRYA 72 Query: 409 QVLQKAMIQLYKTHN--INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 LQK +L K +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 73 NNLQKQQEELGKVMKEFGSPLAGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|6166302|gb|AAF04771.1|AF104228_1 stage III sporulation protein J homolog [Listeria monocytogenes] Length = 88 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 3/81 (3%) Query: 381 KQYVSTANMKNIQPKIDELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 KQ S M N+QPKI EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+ Sbjct: 1 KQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQM 60 Query: 438 PVFFAIYKVISISLEMRHAPF 458 P+ Y+ IS + E++ F Sbjct: 61 PILLGFYQAISRTAEIKTDSF 81 >gi|328466765|gb|EGF37883.1| OxaA-like protein precursor [Listeria monocytogenes 1816] Length = 275 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 35/238 (14%) Query: 358 GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQ---- 409 GN+GIAI++TT+ ++ L PL AK Q + M +P+IDE++ + K++ + Sbjct: 55 GNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQA 114 Query: 410 VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I S E+ F W +L + Sbjct: 115 TIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIASHTFL-WF-NLGSP 172 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVF 527 D M + I ++ L+ + + P K Q I+ M P++ Sbjct: 173 D------------------MVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMI 214 Query: 528 VFALSSFPAGLIIYWSWSNVI----SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +F + P+ L +YW+ + +++ + + M H EI ++++ F + Q Sbjct: 215 LFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH-PEIKVMEQEEKEFEQIVEEQ 271 >gi|78779670|ref|YP_397782.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9312] gi|78713169|gb|ABB50346.1| putative inner membrane protein [Prochlorococcus marinus str. MIT 9312] Length = 380 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 70/125 (56%), Gaps = 17/125 (13%) Query: 341 FIAKPMFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID-- 397 FI++ + + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP + Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMKTR 63 Query: 398 --ELREKFKQSPPQVLQKAMIQLYKTHNI--NPLAGCWPILLQIPVFFAIYKVISISLEM 453 E++ KF P +K +L K N +PLAGC P+++Q+P+ FA++ + Sbjct: 64 QAEIKSKFSGDP----KKQQEELGKLMNEFGSPLAGCLPLIVQMPILFALFAT------L 113 Query: 454 RHAPF 458 R +PF Sbjct: 114 RGSPF 118 >gi|16803419|ref|NP_464904.1| OxaA-like protein precursor [Listeria monocytogenes EGD-e] gi|46907607|ref|YP_013996.1| OxaA-like protein precursor [Listeria monocytogenes serotype 4b str. F2365] gi|47094519|ref|ZP_00232187.1| SpoJ family protein [Listeria monocytogenes str. 4b H7858] gi|47095963|ref|ZP_00233566.1| SpoJ family protein [Listeria monocytogenes str. 1/2a F6854] gi|224499955|ref|ZP_03668304.1| OxaA-like protein precursor [Listeria monocytogenes Finland 1988] gi|224501677|ref|ZP_03669984.1| OxaA-like protein precursor [Listeria monocytogenes FSL R2-561] gi|226223980|ref|YP_002758087.1| SpoIIIJ protein [Listeria monocytogenes Clip81459] gi|254824561|ref|ZP_05229562.1| OxaA-like protein [Listeria monocytogenes FSL J1-194] gi|254827640|ref|ZP_05232327.1| OxaA-like protein [Listeria monocytogenes FSL N3-165] gi|254829862|ref|ZP_05234517.1| OxaA-like protein precursor [Listeria monocytogenes 10403S] gi|254852573|ref|ZP_05241921.1| OxaA-like protein [Listeria monocytogenes FSL R2-503] gi|254898455|ref|ZP_05258379.1| OxaA-like protein precursor [Listeria monocytogenes J0161] gi|254912054|ref|ZP_05262066.1| SpoJ family protein [Listeria monocytogenes J2818] gi|254932564|ref|ZP_05265923.1| OxaA-like protein [Listeria monocytogenes HPB2262] gi|254936381|ref|ZP_05268078.1| OxaA-like protein [Listeria monocytogenes F6900] gi|255521766|ref|ZP_05389003.1| OxaA-like protein precursor [Listeria monocytogenes FSL J1-175] gi|284801765|ref|YP_003413630.1| OxaA-like protein precursor [Listeria monocytogenes 08-5578] gi|284994907|ref|YP_003416675.1| OxaA-like protein precursor [Listeria monocytogenes 08-5923] gi|300766399|ref|ZP_07076356.1| SpoJ family protein [Listeria monocytogenes FSL N1-017] gi|38503111|sp|Q8Y7A9|OXAA2_LISMO RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|67461028|sp|Q71ZU1|OXAA2_LISMF RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|16410795|emb|CAC99457.1| lmo1379 [Listeria monocytogenes EGD-e] gi|46880875|gb|AAT04173.1| SpoJ family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47015709|gb|EAL06639.1| SpoJ family protein [Listeria monocytogenes str. 1/2a F6854] gi|47017102|gb|EAL07967.1| SpoJ family protein [Listeria monocytogenes str. 4b H7858] gi|225876442|emb|CAS05151.1| Putative SpoIIIJ protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258600019|gb|EEW13344.1| OxaA-like protein [Listeria monocytogenes FSL N3-165] gi|258605886|gb|EEW18494.1| OxaA-like protein [Listeria monocytogenes FSL R2-503] gi|258608972|gb|EEW21580.1| OxaA-like protein [Listeria monocytogenes F6900] gi|284057327|gb|ADB68268.1| OxaA-like protein precursor [Listeria monocytogenes 08-5578] gi|284060374|gb|ADB71313.1| OxaA-like protein precursor [Listeria monocytogenes 08-5923] gi|293584123|gb|EFF96155.1| OxaA-like protein [Listeria monocytogenes HPB2262] gi|293590021|gb|EFF98355.1| SpoJ family protein [Listeria monocytogenes J2818] gi|293593800|gb|EFG01561.1| OxaA-like protein [Listeria monocytogenes FSL J1-194] gi|300512903|gb|EFK39993.1| SpoJ family protein [Listeria monocytogenes FSL N1-017] gi|332311821|gb|EGJ24916.1| Membrane protein oxaA 2 [Listeria monocytogenes str. Scott A] Length = 275 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 35/238 (14%) Query: 358 GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQ---- 409 GN+GIAI++TT+ ++ L PL AK Q + M +P+IDE++ + K++ + Sbjct: 55 GNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQA 114 Query: 410 VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I S E+ F W +L + Sbjct: 115 TIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIASHTFL-WF-NLGSP 172 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVF 527 D M + I ++ L+ + + P K Q I+ M P++ Sbjct: 173 D------------------MVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMI 214 Query: 528 VFALSSFPAGLIIYWSWSNVI----SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +F + P+ L +YW+ + +++ + + M H EI ++++ F + Q Sbjct: 215 LFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH-PEIKVMEQEEKEFEQIVEEQ 271 >gi|168334920|ref|ZP_02693040.1| 60 kDa inner membrane insertion protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 407 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 4/95 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQK 413 VG GIAI+L T F +LL PL KQ +T M IQP++ ++++K+ K Q+ Q Sbjct: 25 VGTLGIAIILFTFFTRLLLTPLQIKQQRTTRGMSKIQPEMQKIQQKYAGRKDQQSQLAQS 84 Query: 414 AMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +Q LYK +NINP AGC P+L+Q+P+ +A+Y V+ Sbjct: 85 QEMQALYKKYNINPWAGCLPLLIQLPLIYALYAVL 119 >gi|328474988|gb|EGF45780.1| OxaA-like protein precursor [Listeria monocytogenes 220] Length = 273 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 35/238 (14%) Query: 358 GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQ---- 409 GN+GIAI++TT+ ++ L PL AK Q + M +P+IDE++ + K++ + Sbjct: 55 GNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQA 114 Query: 410 VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I S E+ F W +L + Sbjct: 115 TIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIASHTFL-WF-NLGSP 172 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVF 527 D M + I ++ L+ + + P K Q I+ M P++ Sbjct: 173 D------------------MVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMI 214 Query: 528 VFALSSFPAGLIIYWSWSNVI----SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +F + P+ L +YW+ + +++ + + M H EI ++++ F + Q Sbjct: 215 LFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH-PEIKVMEQEEKEFEQIVEEQ 271 >gi|315640360|ref|ZP_07895476.1| stage III sporulation protein J [Enterococcus italicus DSM 15952] gi|315483896|gb|EFU74376.1| stage III sporulation protein J [Enterococcus italicus DSM 15952] Length = 280 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 27/205 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK---A 414 GN GI I+L T+ ++++ PL Q S +++QP++ +L+ ++ Q QK Sbjct: 57 GNAGIGIILFTIIIRVILLPLMHFQTKSMRKTQDLQPQLKKLQAQYSSRDTQTQQKLREE 116 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY +N+NP GC P+L+Q+P+ A+++ IS + F W++ L D Sbjct: 117 TQKLYAENNVNPYIGCLPLLVQMPILMALWQAISRVPALTEGHFL-WLQ-LGLKD----- 169 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQM---KMSPPPADKGQAMILNWMPVVFVFAL 531 P+Y I PI+ +L F MS ++ ++ MP++ +F Sbjct: 170 ------PYY--------ILPILAALFTFASTYLSSMSQVESNASMKIMTFVMPLMILFMG 215 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 + +GL +YW SN ++Q +I Sbjct: 216 VNLASGLSLYWVISNGFQVIQTLLI 240 >gi|254558115|ref|YP_003064532.1| cell division protein [Lactobacillus plantarum JDM1] gi|254047042|gb|ACT63835.1| cell division protein [Lactobacillus plantarum JDM1] Length = 277 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 24/206 (11%) Query: 352 YFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ---SP 407 + NL G+ +G+ I++ T+ ++++ PL Q + M+ +QP++ L++K+ Sbjct: 50 WLSNLFGHSYGLGIIVFTLIIRIIILPLMIFQTRNMVAMQEVQPQMKALQKKYSSRDMET 109 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q LQ M +LY H ++P+A P+L+Q+P+ A+Y+ I + ++ F W++ L + Sbjct: 110 QQKLQAEMKKLYAKHGVHPMASMLPLLVQLPILIALYQAIWRTQALKTGSFL-WLQ-LGS 167 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVV 526 DP + +LP F W + M P G + + MPV+ Sbjct: 168 KDP------YYVLPILAAIFTFASSW-----------LAMKSQPEQNGMTTSMTYLMPVI 210 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQ 552 + + P+ L +YW SN + Q Sbjct: 211 ILITAINVPSALSLYWVISNAFQVGQ 236 >gi|194477174|ref|YP_002049353.1| putative inner membrane protein translocase component YidC [Paulinella chromatophora] gi|171192181|gb|ACB43143.1| putative inner membrane protein translocase component YidC [Paulinella chromatophora] Length = 382 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 65/116 (56%), Gaps = 16/116 (13%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID----ELREKFK 404 ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + E++ ++ Sbjct: 13 ILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEIKTRYA 72 Query: 405 QSPPQVLQKAMIQLYKTHN--INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +P QK +L K N +PLAGC P+++Q+P+ FA++ +R +PF Sbjct: 73 NNP----QKQQEELGKLMNEFGSPLAGCLPLIVQMPILFALFAT------LRGSPF 118 >gi|159903814|ref|YP_001551158.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9211] gi|159888990|gb|ABX09204.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT 9211] Length = 383 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 10/113 (8%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---Q 405 ++ +FY LV ++G+AI+ T+ ++L FPL+ S MK QP + + + + K Sbjct: 13 ILDFFYGLVPSYGLAIVALTIVIRLALFPLSAGSIRSARRMKIAQPVMQKRQAEIKTRYA 72 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + PQ Q+ + +L +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 73 NNPQKQQEELGKLMGEFG-SPLAGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|28379981|ref|NP_786873.1| cell division protein [Lactobacillus plantarum WCFS1] gi|300769104|ref|ZP_07078993.1| stage III sporulation protein J [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308182185|ref|YP_003926313.1| cell division protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|38502978|sp|Q88RX1|OXAA1_LACPL RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|28272822|emb|CAD65751.1| cell division protein [Lactobacillus plantarum WCFS1] gi|300493344|gb|EFK28523.1| stage III sporulation protein J [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308047676|gb|ADO00220.1| cell division protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 277 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 24/206 (11%) Query: 352 YFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ---SP 407 + NL G+ +G+ I++ T+ ++++ PL Q + M+ +QP++ L++K+ Sbjct: 50 WLSNLFGHSYGLGIIVFTLIIRIIILPLMIFQTRNMVAMQEVQPQMKALQKKYSSRDMET 109 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q LQ M +LY H ++P+A P+L+Q+P+ A+Y+ I + ++ F W++ L + Sbjct: 110 QQKLQAEMKKLYAKHGVHPMASMLPLLVQLPILIALYQAIWRTQALKTGSFL-WLQ-LGS 167 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVV 526 DP + +LP F W + M P G + + MPV+ Sbjct: 168 KDP------YYVLPILAAIFTFASSW-----------LAMKSQPEQNGMTTSMTYLMPVI 210 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQ 552 + + P+ L +YW SN + Q Sbjct: 211 ILITAINVPSALSLYWVISNAFQVGQ 236 >gi|225352375|ref|ZP_03743398.1| hypothetical protein BIFPSEUDO_03992 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156882|gb|EEG70251.1| hypothetical protein BIFPSEUDO_03992 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 344 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 122/262 (46%), Gaps = 46/262 (17%) Query: 336 WGWFYFIAKP----MFMLMSYFYNLVGNFGI---------AIMLTTVFVKLLFFPL---- 378 WGW Y + P M +M+ F+ + G+ +I+ + V+ FPL Sbjct: 13 WGWLYKLLYPVEWLMTQIMAVFHKFLVMLGMNEIGFSWVMSIVFLVLVVQACVFPLFYKS 72 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGC---W 431 K A M +QPK+ ++ K+K + + +Q+ M++LY+ ++ NP+ GC Sbjct: 73 MKGMRKMQAQMTVLQPKMQRIQNKYKGKNDPASKEAMQREMMKLYQDNDANPMGGCTSML 132 Query: 432 PILLQIPVFFAIYKVISI-----SLEMRHAPFWGWIKDLAAADPTNIFTLFGI------L 480 P+ +Q PVF ++ +S + R G D+A A T+FG+ Sbjct: 133 PMFVQGPVFMCMFYTLSAIPYIARGKFRDGQGLGAF-DIATAKQFTSTTVFGVNVADNFT 191 Query: 481 PFYLPGFMHVGIWPIIMSLSM-FIQ---MK--MSPPPADKG----QAMILNWMPVVFVFA 530 + G + + I+ +M + F+Q MK M+ A+K Q M+L P++++F+ Sbjct: 192 TAAVHGKVVIAIFVALMCFCLWFMQYNSMKRNMAQSAANKQTEMMQKMMLWMFPIMYIFS 251 Query: 531 LSSFPAGLIIYWSWSNVISIVQ 552 + P +++YW +N+ ++++ Sbjct: 252 GIAMPFAVLVYWLTNNICNLLR 273 >gi|317970543|ref|ZP_07971933.1| putative inner membrane protein translocase component YidC [Synechococcus sp. CB0205] Length = 378 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 65/114 (57%), Gaps = 12/114 (10%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID----ELREKFK 404 ++ +FY LV ++G+AI+ TV ++L FPL+ + M+ QP + E++ K+ Sbjct: 13 ILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRNARRMRIAQPVMQKRQAEIKAKYA 72 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + PQ Q+ + L K +PL+GC P+L+Q+P+ FA++ +R +PF Sbjct: 73 NN-PQKQQEELGSLMKEFG-SPLSGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|225020858|ref|ZP_03710050.1| hypothetical protein CORMATOL_00866 [Corynebacterium matruchotii ATCC 33806] gi|305681586|ref|ZP_07404392.1| membrane protein insertase, YidC/Oxa1 family [Corynebacterium matruchotii ATCC 14266] gi|224946340|gb|EEG27549.1| hypothetical protein CORMATOL_00866 [Corynebacterium matruchotii ATCC 33806] gi|305658746|gb|EFM48247.1| membrane protein insertase, YidC/Oxa1 family [Corynebacterium matruchotii ATCC 14266] Length = 319 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+L T V++L Q S M+ IQP++ E+R K+K +++Q+ +L K Sbjct: 34 LAIVLLTFTVRILLVRPTINQMRSMRKMQEIQPQMQEIRNKYKNDQQKMMQETQ-KLQKE 92 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 NPLAGC PIL+Q+PVF +Y V+ Sbjct: 93 MGFNPLAGCLPILVQMPVFLGLYHVL 118 >gi|58337788|ref|YP_194373.1| family protein [Lactobacillus acidophilus NCFM] gi|58255105|gb|AAV43342.1| putative family protein [Lactobacillus acidophilus NCFM] Length = 322 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 34/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +GW Y ++ +P+ +M +++G G I++ T V+L+ PL K Sbjct: 39 YGWVYQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ---SPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K +P Q L +LY + ++ G C P+L+Q+P+ Sbjct: 99 KMARLQPQMKLIQNAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGIGCLPLLIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S E+ H+ F+G + I T+F ++ Y+ +GI Sbjct: 159 WGIYQAVFYSQELAHSTFFGISLSQKSVVLAIIATVFTVIQGYIS---TIGI-------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K ++ + P++ +F SF L +YW+ N + I+QQ ++ Sbjct: 208 --------PEEQKKTMQSMMLFNPIMTLFFSLSFSGALALYWAAGNFVMIIQQLIV 255 >gi|255025839|ref|ZP_05297825.1| OxaA-like protein precursor [Listeria monocytogenes FSL J2-003] Length = 229 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 35/238 (14%) Query: 358 GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQ---- 409 GN+GIAI++TT+ ++ L PL AK Q + M +P+IDE++ + K++ + Sbjct: 9 GNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQA 68 Query: 410 VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I S E+ F W +L + Sbjct: 69 TIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIASHTFL-WF-NLGSP 126 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVF 527 D M + I ++ L+ + + P K Q I+ M P++ Sbjct: 127 D------------------MVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMI 168 Query: 528 VFALSSFPAGLIIYWSWSNVI----SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +F + P+ L +YW+ + +++ + + M H EI ++++ F + Q Sbjct: 169 LFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH-PEIKVMEQEEKEFEQIVEEQ 225 >gi|225028842|ref|ZP_03718034.1| hypothetical protein EUBHAL_03129 [Eubacterium hallii DSM 3353] gi|224953838|gb|EEG35047.1| hypothetical protein EUBHAL_03129 [Eubacterium hallii DSM 3353] Length = 428 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 65/117 (55%), Gaps = 6/117 (5%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 GW + + + Y N +G N G+ I++ T+ V+LL PL KQ + +QP Sbjct: 12 GWIATLLGYVMEFIFYCLNFIGIQNIGLCIIIFTIIVRLLMLPLTIKQQKFAKISQVMQP 71 Query: 395 KIDELREKFKQSPPQ---VLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +I++++ K++ Q + Q IQ +Y+ + NP GC +++Q+P+F A+Y+VI Sbjct: 72 EINKIQRKYRNKTDQASMMKQNEEIQKVYEKYGTNPTGGCLQLVVQMPIFLALYQVI 128 >gi|251812194|ref|ZP_04826667.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis BCM-HMP0060] gi|251804291|gb|EES56948.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis BCM-HMP0060] Length = 305 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 33/233 (14%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLA----KKQYVSTAN 388 D +F +PM L+ + N V NFG+AI++ +F++L+ P K ++ Sbjct: 44 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 103 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + A ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 104 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 163 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F I ++ S Sbjct: 164 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF---------IQAVVSSK 212 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +M P + M++ P++ ++ + L +YWS S + ++Q Sbjct: 213 TM-------PQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQ 258 >gi|169351635|ref|ZP_02868573.1| hypothetical protein CLOSPI_02416 [Clostridium spiroforme DSM 1552] gi|169291857|gb|EDS73990.1| hypothetical protein CLOSPI_02416 [Clostridium spiroforme DSM 1552] Length = 289 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/237 (27%), Positives = 113/237 (47%), Gaps = 23/237 (9%) Query: 337 GWFYF-----IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 GWF F IAK + + Y VGN I ++ T+ V L+ P+ K VST ++ Sbjct: 53 GWFDFLFVIPIAKGILFINQY----VGNVAIGVIGVTIVVNLITLPIMVKSTVSTQKIQL 108 Query: 392 IQPKIDELREKF---KQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +QP++++++ K+ K Q+ Q A IQ LYK HN++ + G + L +P+ A+++ + Sbjct: 109 LQPEMEKIQNKYRGRKDQASQMRQNAEIQNLYKKHNVS-MFGSFATFLTLPIMIAMWQAV 167 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + +G +L ++I F I Y+ + V + I K Sbjct: 168 QRIDILYKTSLFGI--NLGEKPISHIME-FSIE--YIVLLLLVAVTQYFAVQISQIMAKR 222 Query: 508 SPP--PADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 SP P+ + Q M + N M + V+ ++ PA + +YW +N+I IV+ I H Sbjct: 223 SPRYRPSQQMQTMNTMNNVMTLFIVYLAATMPAAMSLYWITTNIIGIVRTVYIQFFH 279 >gi|160882061|ref|YP_001561029.1| 60 kDa inner membrane insertion protein [Clostridium phytofermentans ISDg] gi|160430727|gb|ABX44290.1| 60 kDa inner membrane insertion protein [Clostridium phytofermentans ISDg] Length = 442 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 4/95 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK----QSPPQVLQ 412 + N I I++ T +K+L PL KQ T + P+I +++ K+K Q+ Q Q Sbjct: 36 MANIAICIVIFTFVIKMLMLPLTIKQQKGTRLSAKMNPEIQKVQAKYKGKKDQASMQKQQ 95 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M ++Y + +PL+GC P+L+ +P+ FA+Y+VI Sbjct: 96 AEMQEIYAKYGASPLSGCLPLLISLPIMFALYRVI 130 >gi|6117974|gb|AAF03934.1|AF139908_4 membrane protein homolog [Listeria monocytogenes] Length = 237 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 35/238 (14%) Query: 358 GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQ---- 409 GN+GIAI++TT+ ++ L PL AK Q + M +P+IDE++ + K++ + Sbjct: 17 GNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQA 76 Query: 410 VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I S E+ F W +L + Sbjct: 77 TIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIASHTFL-WF-NLGSP 134 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVF 527 D M + I ++ L+ + + P K Q I+ M P++ Sbjct: 135 D------------------MVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMI 176 Query: 528 VFALSSFPAGLIIYWSWSNVI----SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +F + P+ L +YW+ + +++ + + M H EI ++++ F + Q Sbjct: 177 LFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH-PEIKVMEQEEKEFEQIVEEQ 233 >gi|242241497|ref|ZP_04795942.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis W23144] gi|242235040|gb|EES37351.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis W23144] Length = 305 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 33/233 (14%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLA----KKQYVSTAN 388 D +F +PM L+ + N V NFG+AI++ +F++L+ P K ++ Sbjct: 44 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 103 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + A ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 104 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 163 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F I ++ S Sbjct: 164 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF---------IQAVVSSK 212 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +M P + M++ P++ ++ + L +YWS S + ++Q Sbjct: 213 TM-------PQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQ 258 >gi|293366055|ref|ZP_06612743.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|291319778|gb|EFE60136.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] Length = 305 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 33/233 (14%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLA----KKQYVSTAN 388 D +F +PM L+ + N V NFG+AI++ +F++L+ P K ++ Sbjct: 44 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 103 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + A ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 104 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 163 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F I ++ S Sbjct: 164 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF---------IQAVVSSK 212 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +M P + M++ P++ ++ + L +YWS S + ++Q Sbjct: 213 TM-------PQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQ 258 >gi|205373230|ref|ZP_03226034.1| membrane protein oxaA precursor [Bacillus coahuilensis m4-4] Length = 253 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 124/244 (50%), Gaps = 42/244 (17%) Query: 337 GWFY--FIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN-- 391 G+FY F+ P L+ + N L GNFG+AI++ T+ ++L+ P K + + MK Sbjct: 27 GFFYDTFVF-PFAKLLEWLGNTLGGNFGLAIIIITIIIRLVLMPFMLKTFKNQQEMKGKM 85 Query: 392 --IQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIY 444 ++P++ E+++K K++ + LQ+ M+QLY+ H +NPL GC P+++Q+P+ +Y Sbjct: 86 DKLKPEMQEIQKKLKETKDTEEQRKLQQEMMQLYQKHGVNPLNMGCLPLIIQMPILLGLY 145 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S D+A T+ F F + G ++ I +I + F Q Sbjct: 146 YAIIGS------------PDIA----THTFLWFNL------GEANI-IMALIAGVVYFGQ 182 Query: 505 MKMSP---PPADKGQAMILNWM-PV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 K+S Q I++++ PV + +F+L++ PA L +YW+ V I Q K Sbjct: 183 AKVSLIGIAEEQLQQMKIISYLSPVMILIFSLNA-PAALPLYWTVGGVFVIGQTLFAKKY 241 Query: 560 HGAE 563 + AE Sbjct: 242 YQAE 245 >gi|150019909|ref|YP_001312163.1| inner membrane protein translocase component YidC [Clostridium beijerinckii NCIMB 8052] gi|149906374|gb|ABR37207.1| 60 kDa inner membrane insertion protein [Clostridium beijerinckii NCIMB 8052] Length = 254 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 92/191 (48%), Gaps = 16/191 (8%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI + T+ +++L P K S+ M+ IQP++ +L+ K+K PQ L ++LYK Sbjct: 34 LAIFIFTLIIRILILPFNIKAAKSSQGMQKIQPEVKKLQAKYKDD-PQKLNTETMRLYKE 92 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +N++ GC P LL +P+ A+Y V + A F WI DL A D I + L Sbjct: 93 NNVSVAGGCLPSLLPLPILMALYWVFMGIQGIEGASFL-WIHDLFAPDKYYILPVLAALS 151 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 Y+P ++ P S P +M L ++ V +L +F + L++Y Sbjct: 152 TYIPSYLMSKSTP-------------SQPGGMNMGSMNLVMAGMMGVMSL-NFKSILVLY 197 Query: 542 WSWSNVISIVQ 552 W N+I +Q Sbjct: 198 WIIGNLIQTIQ 208 >gi|256370584|ref|YP_003108409.1| putative inner membrane protein translocase component YidC [Candidatus Sulcia muelleri SMDSEM] gi|256009376|gb|ACU52736.1| putative inner membrane protein translocase component YidC [Candidatus Sulcia muelleri SMDSEM] Length = 571 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 105/200 (52%), Gaps = 15/200 (7%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N GI I+L T+ VKLL P+ QY M+N + ++ KF +P + +I+ Sbjct: 373 NSGIIIILMTIVVKLLLSPITYSQYKFNFFMQNFFMQNFLMQTKFFLNP-----QILIEF 427 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK INP+ ++QIP+F+++ + +R F W K+L+ +D I L Sbjct: 428 YKKIGINPIYSLLGNMIQIPIFYSLMNFFPTLINLRGKRFL-WAKNLSYSDR--ILNLNF 484 Query: 479 ILPFYLPGFMHVGIWPI--IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 +P Y H+ ++ I I+ L +F +++ + + IL ++ ++F F +++P+ Sbjct: 485 NIPIYGN---HISLFNIFNILILFVFTKIRNRKKFSKTNRIYILFYIMMLFFF--NNYPS 539 Query: 537 GLIIYWSWSNVISIVQQAVI 556 G+ IY+ SN+I+I+ ++I Sbjct: 540 GIYIYYISSNIINILFYSLI 559 >gi|254993106|ref|ZP_05275296.1| OxaA-like protein precursor [Listeria monocytogenes FSL J2-064] Length = 249 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 30/196 (15%) Query: 358 GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQ---- 409 GN+GIAI++TT+ ++ L PL AK Q + M +P+IDE++ + K++ + Sbjct: 55 GNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQA 114 Query: 410 VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I S E+ F W +L + Sbjct: 115 TIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIASHTFL-WF-NLGSP 172 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVF 527 D M + I ++ L+ + + P K Q I+ M P++ Sbjct: 173 D------------------MVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMI 214 Query: 528 VFALSSFPAGLIIYWS 543 +F + P+ L +YW+ Sbjct: 215 LFVSFTAPSALALYWA 230 >gi|57867621|ref|YP_189262.1| hypothetical protein SERP1697 [Staphylococcus epidermidis RP62A] gi|81673891|sp|Q5HMD1|OXAA2_STAEQ RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|57638279|gb|AAW55067.1| membrane protein, putative [Staphylococcus epidermidis RP62A] gi|319399577|gb|EFV87832.1| 60Kd inner membrane family protein [Staphylococcus epidermidis FRI909] gi|329726156|gb|EGG62628.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU144] Length = 290 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 33/233 (14%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLA----KKQYVSTAN 388 D +F +PM L+ + N V NFG+AI++ +F++L+ P K ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + A ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F I ++ S Sbjct: 149 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF---------IQAVVSSK 197 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +M P + M++ P++ ++ + L +YWS S + ++Q Sbjct: 198 TM-------PQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQ 243 >gi|255029969|ref|ZP_05301920.1| OxaA-like protein precursor [Listeria monocytogenes LO28] Length = 249 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 30/196 (15%) Query: 358 GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQ---- 409 GN+GIAI++TT+ ++ L PL AK Q + M +P+IDE++ + K++ + Sbjct: 55 GNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQA 114 Query: 410 VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I S E+ F W +L + Sbjct: 115 TIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIASHTFL-WF-NLGSP 172 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVF 527 D M + I ++ L+ + + P K Q I+ M P++ Sbjct: 173 D------------------MVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMI 214 Query: 528 VFALSSFPAGLIIYWS 543 +F + P+ L +YW+ Sbjct: 215 LFVSFTAPSALALYWA 230 >gi|282876503|ref|ZP_06285369.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis SK135] gi|281294755|gb|EFA87283.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis SK135] Length = 290 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 33/233 (14%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLA----KKQYVSTAN 388 D +F +PM L+ + N V NFG+AI++ +F++L+ P K ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + A ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F I ++ S Sbjct: 149 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF---------IQAVVSSK 197 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +M P + M++ P++ ++ + L +YWS S + ++Q Sbjct: 198 TM-------PQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQ 243 >gi|212715145|ref|ZP_03323273.1| hypothetical protein BIFCAT_00031 [Bifidobacterium catenulatum DSM 16992] gi|212661826|gb|EEB22401.1| hypothetical protein BIFCAT_00031 [Bifidobacterium catenulatum DSM 16992] Length = 344 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/270 (24%), Positives = 126/270 (46%), Gaps = 49/270 (18%) Query: 331 EMLID---WGWFYFIAKP----MFMLMSYFYNLVGNFGI---------AIMLTTVFVKLL 374 + L+D WGW Y + P M +M+ F+ + G+ +I+ + V+ Sbjct: 5 QFLLDSGFWGWLYKLLYPVEWLMTQIMAVFHKFLVMLGMNEIGFSWVMSIVFLVLVVQAC 64 Query: 375 FFPL----AKKQYVSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINP 426 FPL K A M +QPK+ ++ K+K + + +Q+ M++LY+ ++ NP Sbjct: 65 VFPLFYKSMKGMRKMQAQMAVLQPKMQRIQNKYKGKNDPASKEAMQREMMKLYQDNDANP 124 Query: 427 LAGC---WPILLQIPVFFAIYKVISI-----SLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 + GC P+ +Q PVF ++ +S + R G D+A A T+FG Sbjct: 125 MGGCTSMLPMFVQGPVFMCMFYTLSAIPYIARGKFRDGQGLGAF-DIATAKQFTSTTVFG 183 Query: 479 I------LPFYLPGFMHVGIWPIIMSLSM-FIQ---MK--MSPPPADKG----QAMILNW 522 + + G + + I+ +M + F+Q MK M+ A+K Q M+L Sbjct: 184 VNVADNFTTAAVHGKVVIAIFVALMCFCLWFMQYNSMKRNMAQSAANKQTEMMQKMMLWM 243 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P++++F+ + P +++YW +N+ ++++ Sbjct: 244 FPIMYIFSGIAMPFAVLVYWLTNNICNLLR 273 >gi|296110738|ref|YP_003621119.1| cell division protein [Leuconostoc kimchii IMSNU 11154] gi|295832269|gb|ADG40150.1| cell division protein [Leuconostoc kimchii IMSNU 11154] Length = 279 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 21/197 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ- 417 N+G+ I++ T+ ++ L PL Q S M+ +QP + L+ K+ + Q M + Sbjct: 64 NYGVGIIVFTILIRFLILPLMVYQIQSMMKMQIVQPALKALQAKYPGKDTESRQLMMAEQ 123 Query: 418 --LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 LYK +NP A P+++Q+PV A+Y+ I S ++ F W++ L DP Sbjct: 124 QALYKDAGVNPFASMLPLIVQMPVLIALYQSIYNSPVLKSGKFL-WLQ-LGNNDP----- 176 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 + +LP F W + + +P +AM + PVV F+ + P Sbjct: 177 -YYVLPILAALFTFASSW---------LSTQATPEQNAMTKAMPYIF-PVVIFFSAMAVP 225 Query: 536 AGLIIYWSWSNVISIVQ 552 + L +YW N+ +Q Sbjct: 226 SALSLYWVVGNLFQTIQ 242 >gi|16800484|ref|NP_470752.1| OxaA-like protein precursor [Listeria innocua Clip11262] gi|38503124|sp|Q92BX6|OXAA2_LISIN RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|16413889|emb|CAC96647.1| lin1416 [Listeria innocua Clip11262] Length = 275 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 35/238 (14%) Query: 358 GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQV--- 410 GN+GIAI++TT+ ++ L PL AK Q + M +P+IDE++ + K++ + Sbjct: 55 GNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQA 114 Query: 411 -LQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I S E+ F W +L + Sbjct: 115 NIQKEMMAVYSKYNINPIQMGCLPLLIQMPILMAFYYAIRGSSEIASHTFL-WF-NLGSP 172 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVF 527 D M + I ++ L+ + + P K Q I+ M P++ Sbjct: 173 D------------------MVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMI 214 Query: 528 VFALSSFPAGLIIYWSWSNVI----SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +F + P+ L +YW+ + +++ + + M H EI ++++ F + Q Sbjct: 215 LFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH-PEIKVMEQEEKEFEQIVEEQ 271 >gi|239624140|ref|ZP_04667171.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239520526|gb|EEQ60392.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 440 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 62/107 (57%), Gaps = 7/107 (6%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK- 404 +F S+F + N G+ I+L T+ K+L PL KQ S+ M +QP+I +++K+K Sbjct: 31 LFKFTSFFG--IENIGLCIILFTLVTKVLMIPLTIKQQQSSKLMAVMQPEISAIQKKYKG 88 Query: 405 ----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 Q ++Q + +Y+ + + GC P+L+Q+P+ FA+Y+VI Sbjct: 89 KENDQKYAMMMQTEIKAVYEKYGTSMTGGCLPLLIQMPIIFALYRVI 135 >gi|27468607|ref|NP_765244.1| lipoprotein precursor [Staphylococcus epidermidis ATCC 12228] gi|38502988|sp|Q8CMK8|OXAA2_STAES RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|27316154|gb|AAO05288.1|AE016749_234 lipoprotein precursor [Staphylococcus epidermidis ATCC 12228] Length = 290 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 33/233 (14%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLA----KKQYVSTAN 388 D +F +PM L+ + N V NFG+AI++ +F++L+ P K ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + A ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F I ++ S Sbjct: 149 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF---------IQAVVSSK 197 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +M P + M++ P++ ++ + L +YWS S + ++Q Sbjct: 198 TM-------PQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQ 243 >gi|329735686|gb|EGG71969.1| putative stage III sporulation protein J [Staphylococcus epidermidis VCU028] Length = 293 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 33/233 (14%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLA----KKQYVSTAN 388 D +F +PM L+ + N V NFG+AI++ +F++L+ P K ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + A ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F I ++ S Sbjct: 149 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF---------IQAVVSSK 197 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +M P + M++ P++ ++ + L +YWS S + ++Q Sbjct: 198 TM-------PQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQ 243 >gi|195978754|ref|YP_002123998.1| OxaA-like protein precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975459|gb|ACG62985.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 306 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 46/254 (18%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQP 394 ++ KP+ L+ YF N +G+AI++ T+ V+ + PL K Y S M ++P Sbjct: 40 YLGKPVSFLIDYFANSTALGYGLAIIVVTIIVRTIILPLGLYQSWKASYQSE-KMAYLKP 98 Query: 395 KIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVIS 448 + + ++ K + Q ++ + + +NPL GC P+L+Q+P F A+Y + Sbjct: 99 FFEPINQRIKNATSTEEKMAAQTELMAAQRENGVNPLGGIGCLPLLIQMPFFSAMYVAVQ 158 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--MK 506 + + + F G DL G V + +I +L F+Q + Sbjct: 159 FTKGVSTSTFMGI--DL--------------------GHRSVLLTAVIAAL-YFVQSWLS 195 Query: 507 MSPPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M P ++ + M +L MP++ + PAGL +YW SI+QQ + + Sbjct: 196 MMAVPEEQREQMKAMLYTMPIMMIVMSFYLPAGLGLYWLVGGFFSIIQQLITTYL----- 250 Query: 565 GLIDRLRSTFSKNY 578 L RLR ++ + Sbjct: 251 -LKPRLRKQIAEEF 263 >gi|184154473|ref|YP_001842814.1| cell division protein [Lactobacillus reuteri JCM 1112] gi|183225817|dbj|BAG26334.1| cell division protein [Lactobacillus reuteri JCM 1112] Length = 277 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 96/203 (47%), Gaps = 23/203 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G +G+ I++ T+ ++++ PL Q + + + P++ +++K+ + +QK ++ Sbjct: 57 GGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQLKAIQKKYSSRDRESMQKMQME 116 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK +NP A P+L+Q+PV +A+Y+ I + +R+ F W++ L DP Sbjct: 117 TQKLYKEAGVNPWASMLPLLVQLPVMWALYQAIWRTSALRNGTF-LWLQ-LGHPDP---- 170 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSS 533 + I+P F + W + M+ P + W MP++ F Sbjct: 171 --YYIMPILAALFTFISSW-----------LSMASMPEKNSMTTTMTWFMPIMVFFMALG 217 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 F + + +YW +N +VQ +I Sbjct: 218 FSSAITLYWVVTNAFQVVQTLII 240 >gi|148545141|ref|YP_001272511.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM 20016] gi|194467400|ref|ZP_03073387.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri 100-23] gi|227364304|ref|ZP_03848397.1| stage III sporulation protein J precursor [Lactobacillus reuteri MM2-3] gi|325683503|ref|ZP_08163019.1| stage III sporulation protein J [Lactobacillus reuteri MM4-1A] gi|148532175|gb|ABQ84174.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM 20016] gi|194454436|gb|EDX43333.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri 100-23] gi|227070617|gb|EEI08947.1| stage III sporulation protein J precursor [Lactobacillus reuteri MM2-3] gi|324977853|gb|EGC14804.1| stage III sporulation protein J [Lactobacillus reuteri MM4-1A] Length = 263 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 96/203 (47%), Gaps = 23/203 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G +G+ I++ T+ ++++ PL Q + + + P++ +++K+ + +QK ++ Sbjct: 43 GGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQLKAIQKKYSSRDRESMQKMQME 102 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK +NP A P+L+Q+PV +A+Y+ I + +R+ F W++ L DP Sbjct: 103 TQKLYKEAGVNPWASMLPLLVQLPVMWALYQAIWRTSALRNGTF-LWLQ-LGHPDP---- 156 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSS 533 + I+P F + W + M+ P + W MP++ F Sbjct: 157 --YYIMPILAALFTFISSW-----------LSMASMPEKNSMTTTMTWFMPIMVFFMALG 203 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 F + + +YW +N +VQ +I Sbjct: 204 FSSAITLYWVVTNAFQVVQTLII 226 >gi|71013508|ref|XP_758604.1| hypothetical protein UM02457.1 [Ustilago maydis 521] gi|46098262|gb|EAK83495.1| hypothetical protein UM02457.1 [Ustilago maydis 521] Length = 550 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 27/207 (13%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI----DELREKFKQSPPQV-LQKAMI-- 416 I +TTV ++LL P++ + + NIQP++ D+++ +K + Q+ +QKA++ Sbjct: 241 ITITTVALRLLIAPISIAGQKNAIRLGNIQPEMKRNMDDIKH-YKAAGDQMQMQKAVMAT 299 Query: 417 -QLYKTHNINPLAGCWPILLQIPVFFAIYKVI-----SISLEMRHA-PFWGWIKDLAAAD 469 +L + +N NP+ PIL Q P+ F+ + + S S H PFW DL D Sbjct: 300 QKLLRDNNANPIKSLVPILFQFPLMFSYFLALERIAKSGSESFAHGGPFW--TTDLTVPD 357 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT I L + VG S S Q +M + + +MP++ F Sbjct: 358 PTWILPAISTLATF--AVAEVGFKVGTNSQSDPAQSQMM-------KYIFRGFMPILAWF 408 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 + ++FP+G+++YW+ +N+ S+ Q A++ Sbjct: 409 S-TTFPSGVLVYWATTNLYSLAQLAIL 434 >gi|225867929|ref|YP_002743877.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. zooepidemicus] gi|225701205|emb|CAW98134.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. zooepidemicus] Length = 306 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 46/254 (18%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQP 394 ++ KP+ L+ YF N +G+AI++ T+ V+ + PL K Y S M ++P Sbjct: 40 YLGKPVSFLIDYFANSTALGYGLAIIVVTIIVRTIILPLGLYQSWKASYQSE-KMAYLKP 98 Query: 395 KIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVIS 448 + + ++ K + Q ++ + + +NPL GC P+L+Q+P F A+Y + Sbjct: 99 FFEPINQRIKNATSTEEKMAAQTELMAAQRENGVNPLGGIGCLPLLIQMPFFSAMYVAVQ 158 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--MK 506 + + + F G DL G V + +I +L F+Q + Sbjct: 159 FTKGVSTSTFMGI--DL--------------------GHRSVLLTAVIAAL-YFVQSWLS 195 Query: 507 MSPPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M P ++ + M +L MP++ + PAGL +YW SI+QQ + + Sbjct: 196 MMAVPEEQREQMKAMLYTMPIMMIVMSFYLPAGLGLYWLVGGFFSIIQQLITTYL----- 250 Query: 565 GLIDRLRSTFSKNY 578 L RLR ++ + Sbjct: 251 -LKPRLRKQIAEEF 263 >gi|169826543|ref|YP_001696701.1| membrane protein oxaA 2 [Lysinibacillus sphaericus C3-41] gi|168991031|gb|ACA38571.1| Membrane protein oxaA 2 precursor [Lysinibacillus sphaericus C3-41] Length = 210 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 38/232 (16%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQP 394 F F+ +P+ + + ++ G++ I ++ T+ V+++ PL AK Q S M I+P Sbjct: 2 FTFLTQPIIYFIHFIHSFTGSYAIGVISITIAVRVILMPLFIKSAKHQKHSKELMTVIKP 61 Query: 395 KIDELREKFK----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++D L K K +S +Q+ + +L + L GC PI++Q+PV F++Y I + Sbjct: 62 ELDVLTAKLKNSNDESEKITVQQKIQELTSDSLKSSLLGCLPIIIQLPVLFSLYYAIKLD 121 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + F W+ +L D +GI II + F+Q +S Sbjct: 122 TVIASENFL-WM-NLGTVD--------------------IGI-SIIACVIYFMQSWLS-- 156 Query: 511 PADKGQAM---ILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIVQQAVIMK 558 DK Q M +L ++ + + S F PA + IYW+ S ++ ++QQ +I K Sbjct: 157 -LDKNQPMNVKVLVFINPIMILIFSLFNPAIIPIYWTVSALLLMIQQLIIKK 207 >gi|227543716|ref|ZP_03973765.1| stage III sporulation protein J precursor [Lactobacillus reuteri CF48-3A] gi|300908781|ref|ZP_07126244.1| stage III sporulation protein J [Lactobacillus reuteri SD2112] gi|227186284|gb|EEI66355.1| stage III sporulation protein J precursor [Lactobacillus reuteri CF48-3A] gi|300894188|gb|EFK87546.1| stage III sporulation protein J [Lactobacillus reuteri SD2112] Length = 277 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 96/203 (47%), Gaps = 23/203 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G +G+ I++ T+ ++++ PL Q + + + P++ +++K+ + +QK ++ Sbjct: 57 GGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQLKAIQKKYSSRDRESMQKMQME 116 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK +NP A P+L+Q+PV +A+Y+ I + +R+ F W++ L DP Sbjct: 117 TQKLYKEAGVNPWASMLPLLVQLPVMWALYQAIWRTSALRNGTF-LWLQ-LGHPDP---- 170 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSS 533 + I+P F + W + M+ P + W MP++ F Sbjct: 171 --YYIMPILAALFTFISSW-----------LSMASMPEKNSMTTTMTWFMPIMVFFMALG 217 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 F + + +YW +N +VQ +I Sbjct: 218 FSSAITLYWVVTNAFQVVQTLII 240 >gi|225871157|ref|YP_002747104.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. equi 4047] gi|225700561|emb|CAW95058.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. equi 4047] Length = 306 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 46/254 (18%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQP 394 ++ KP+ L+ YF N +G+AI++ T+ V+ + PL K Y S M ++P Sbjct: 40 YLGKPVSFLIDYFANSTALGYGLAIIVVTIIVRTIILPLGLYQSWKASYQSE-KMAYLKP 98 Query: 395 KIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVIS 448 + + ++ K + Q ++ + + +NPL GC P+L+Q+P F A+Y + Sbjct: 99 FFEPINQRIKNATSTEEKMAAQTELMAAQRENGVNPLGGIGCLPLLIQMPFFSAMYVAVQ 158 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--MK 506 + + + F G DL G V + +I +L F+Q + Sbjct: 159 FTKGVSTSTFMGI--DL--------------------GHRSVLLTAVIAAL-YFVQSWLS 195 Query: 507 MSPPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M P ++ + M +L MP++ + PAGL +YW SI+QQ + + Sbjct: 196 MMAVPEEQREQMKAMLYTMPIMMIVMSFYLPAGLGLYWLVGGFFSIIQQLITTYL----- 250 Query: 565 GLIDRLRSTFSKNY 578 L RLR ++ + Sbjct: 251 -LKPRLRKQIAEEF 263 >gi|71902952|ref|YP_279755.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS6180] gi|71802047|gb|AAX71400.1| inner membrane protein [Streptococcus pyogenes MGAS6180] Length = 307 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 32/227 (14%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQP 394 F+ KPM + YF N G +G+AI++ T+ V+ L PL K Y S M ++P Sbjct: 40 FLGKPMSYFIDYFANNAGLGYGLAIIIVTIIVRTLILPLGLYQSWKASYQSE-KMAFLKP 98 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVIS 448 + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 99 VFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQ 158 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F G DL + + + L F+ W LSM M +S Sbjct: 159 YTKGVSTSTFMGI--DLGSRSLV-LTAIIAALYFFQS-------W-----LSM---MAVS 200 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ + M+ MP++ +F S PAG+ +YW SI+QQ + Sbjct: 201 EEQREQMKTMMYT-MPIMMIFMSFSLPAGVGLYWLVGGFFSIIQQLI 246 >gi|94993686|ref|YP_601784.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS10750] gi|94547194|gb|ABF37240.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10750] Length = 307 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 32/227 (14%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQP 394 F+ KPM + YF N G +G+AI++ T+ V+ L PL K Y S M ++P Sbjct: 40 FLGKPMSYFIDYFANNAGLGYGLAIIIVTIIVRTLILPLGLYQSWKASYQSE-KMTFLKP 98 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVIS 448 + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 99 VFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQ 158 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F G DL + + + L F+ W LSM M +S Sbjct: 159 YTKGVSTSTFMGI--DLGSRSLV-LTAIIAALYFFQS-------W-----LSM---MAVS 200 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ + M+ MP++ +F S PAG+ +YW SI+QQ + Sbjct: 201 EEQREQMKTMMYT-MPIMMIFMSFSLPAGVGLYWLVGGFFSIIQQLI 246 >gi|116072768|ref|ZP_01470034.1| putative inner membrane protein translocase component YidC [Synechococcus sp. BL107] gi|116064655|gb|EAU70415.1| putative inner membrane protein translocase component YidC [Synechococcus sp. BL107] Length = 380 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 10/113 (8%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---Q 405 ++ +FY LV ++G+AI+ T+ +++ +PL+ S M+ QP + + + K Sbjct: 13 ILDFFYGLVPSYGLAIVALTLVIRVALYPLSAGSIRSARRMRIAQPVMQKRQADIKARYA 72 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 S PQ Q+ + ++ K +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 73 SNPQKQQEELGKVMKEFG-SPLAGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|270292097|ref|ZP_06198312.1| SpoIIIJ family protein [Streptococcus sp. M143] gi|270279625|gb|EFA25467.1| SpoIIIJ family protein [Streptococcus sp. M143] Length = 309 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 31/227 (13%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNI---- 392 I PM + YF N +G FG+ I++ T+ V+L+ PL K + + M + Sbjct: 44 IGAPMAEAIKYFANDMGLGFGMGIIIVTIIVRLIILPLGIYQSWKATLHSEKMNALKHVL 103 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 +P L+E Q Q+A+ K H I+ L G C+PILLQ+P F AIY + Sbjct: 104 EPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMLGGVGCFPILLQMPFFSAIYFAAQHT 163 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV-GIWPIIMSLSMFIQMKMSP 509 + + F G + P+ + F + +Y+ + + G+ + + + MSP Sbjct: 164 EGVAGSSFLG----IELGSPSMLLVAFAGILYYIQSLLSLHGVEDEMQREQLKKMIYMSP 219 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ +F+L S PA + +YW + I+QQ ++ Sbjct: 220 --------------LMIVIFSLFS-PASVTLYWVVGGFMMILQQFIV 251 >gi|227904438|ref|ZP_04022243.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus acidophilus ATCC 4796] gi|227867813|gb|EEJ75234.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus acidophilus ATCC 4796] Length = 322 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 38/238 (15%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +GW Y ++ +P+ +M +++G G I++ T V+L+ PL K Sbjct: 39 YGWVYQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ---SPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K +P Q L +LY + ++ G C P+L+Q+P+ Sbjct: 99 KMARLQPQMKLIQNAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGIGCLPLLIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S E+ H+ F+G + I T+F ++ Y+ Sbjct: 159 WGIYQAVFYSQELAHSTFFGISLSQKSVVLAIIATVFTVIQGYIS--------------- 203 Query: 501 MFIQMKMSPPPADKG--QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +S P K Q+M+L + P++ +F SF L +YW+ N + I+QQ ++ Sbjct: 204 -----TISIPEEQKKTMQSMML-FNPIMTLFFSLSFSGALALYWAAGNFVMIIQQLIV 255 >gi|311065163|ref|YP_003971889.1| inner membrane insertion protein [Bifidobacterium bifidum PRL2010] gi|310867483|gb|ADP36852.1| Inner membrane insertion protein [Bifidobacterium bifidum PRL2010] Length = 309 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 110/234 (47%), Gaps = 31/234 (13%) Query: 348 MLMSYFYNLVGN--FGIAIMLTTVFVKLL----FFPLAKKQYVSTANMKNIQPKIDELRE 401 +L F L+G GI+ +L VF+ L+ P+ KQ S M+ +QPK+ ++ Sbjct: 6 VLFHKFLTLLGMAPIGISWVLAIVFLVLVVHACILPIYLKQMKSMRKMQALQPKMQHIQN 65 Query: 402 KFK----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEM 453 K+K Q+ + + + M++LY+ ++ NP+ CW ++Q PVF ++ ++S I+ Sbjct: 66 KYKGKKDQASKEAMSREMMKLYQDNDANPMGSCWTAVIQGPVFMCMFYMLSAIPYIATGK 125 Query: 454 RHAPFWGWIKDLAAAD--PTNIFTLFGILPFYLP---GFMHVGIWPIIMSLSM----FIQ 504 R A G A T +F + F G + +G + ++M M F Sbjct: 126 RGA--LGAFDQATAKQFAQTRVFGVSVTDTFGTANNSGKVVIGFFILLMCACMWYMQFNN 183 Query: 505 MKMSPPPAD------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M+ + P A K Q + P++++F+ FP +++YW +N ++ + Sbjct: 184 MRKNLPKASMQGSTYKMQQAMTWGFPIMYIFSGIMFPFAVLVYWLTNNACNLAR 237 >gi|266620970|ref|ZP_06113905.1| stage III sporulation protein J [Clostridium hathewayi DSM 13479] gi|288867392|gb|EFC99690.1| stage III sporulation protein J [Clostridium hathewayi DSM 13479] Length = 428 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 31/166 (18%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +++DW +F L S F + N G+ I+L T+ KLL FPL KQ S+ M Sbjct: 22 IIMDW---------LFKLTSIFG--IQNIGLCIILFTLVTKLLMFPLTLKQQKSSKLMSI 70 Query: 392 IQPKIDELREKFKQSPPQ---VLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +QP+++ ++ K+K Q + Q IQ LY+ + + GC +++Q+P+ FA+Y+VI Sbjct: 71 MQPELNAIQAKYKGKKDQESMMKQNVEIQALYEKYGTSMTGGCLQLVIQMPILFALYQVI 130 Query: 448 SISLEMRHAP-FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 H P + +KD+ T+I +L G HVG+ Sbjct: 131 ------YHIPAYVSSVKDVFMNVVTSITSL---------GVDHVGM 161 >gi|19745513|ref|NP_606649.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS8232] gi|50913669|ref|YP_059641.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS10394] gi|94987926|ref|YP_596027.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS9429] gi|94991810|ref|YP_599909.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS2096] gi|306827963|ref|ZP_07461230.1| membrane protein [Streptococcus pyogenes ATCC 10782] gi|38503058|sp|Q8P2D8|OXAA2_STRP8 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|73921526|sp|Q5XDQ5|OXAA2_STRP6 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|19747631|gb|AAL97148.1| hypothetical protein spyM18_0404 [Streptococcus pyogenes MGAS8232] gi|50902743|gb|AAT86458.1| 60 kDa inner membrane protein [Streptococcus pyogenes MGAS10394] gi|94541434|gb|ABF31483.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS9429] gi|94545318|gb|ABF35365.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS2096] gi|304429882|gb|EFM32924.1| membrane protein [Streptococcus pyogenes ATCC 10782] Length = 307 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 32/227 (14%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQP 394 F+ KPM + YF N G +G+AI++ T+ V+ L PL K Y S M ++P Sbjct: 40 FLGKPMSYFIDYFANNAGLGYGLAIIIVTIIVRTLILPLGLYQSWKASYQSE-KMTFLKP 98 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVIS 448 + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 99 VFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQ 158 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F G DL + + + L F+ W LSM M +S Sbjct: 159 YTKGVSTSTFMGI--DLGSRSLV-LTAIIAALYFFQS-------W-----LSM---MAVS 200 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ + M+ MP++ +F S PAG+ +YW SI+QQ + Sbjct: 201 EEQREQMKTMMYT-MPIMMIFMSFSLPAGVGLYWLVGGFFSIIQQLI 246 >gi|170780887|ref|YP_001709219.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] gi|169155455|emb|CAQ00563.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] Length = 255 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 7/108 (6%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+A++L T+ V+ + P+ Q + I P + ELR + P Q + +A+ +LY Sbjct: 37 GVAVILLTLVVRAVLVPVGVAQVRAEIQRLRIAPALAELRRRHAGKPEQ-MSRAVQELYA 95 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +PLAGC P L Q PV A+Y + + HA G L AA Sbjct: 96 REGASPLAGCLPTLAQAPVLAAVYTLFA------HARIGGEANALLAA 137 >gi|78185353|ref|YP_377788.1| putative inner membrane protein translocase component YidC [Synechococcus sp. CC9902] gi|78169647|gb|ABB26744.1| putative inner membrane protein; similar to 60 kDa inner membrane protein family [Synechococcus sp. CC9902] Length = 380 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 10/113 (8%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---Q 405 ++ +FY LV ++G+AI+ T+ +++ +PL+ S M+ QP + + + K Sbjct: 13 ILDFFYGLVPSYGLAIVALTLVIRVALYPLSAGSIRSARRMRIAQPVMQKRQADIKARYA 72 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 S PQ Q+ + ++ K +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 73 SNPQKQQEELGKVMKEFG-SPLAGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|160941468|ref|ZP_02088803.1| hypothetical protein CLOBOL_06359 [Clostridium bolteae ATCC BAA-613] gi|158435614|gb|EDP13381.1| hypothetical protein CLOBOL_06359 [Clostridium bolteae ATCC BAA-613] Length = 438 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 10/116 (8%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW I +F S F L N G+ I+L T+ K+L PL KQ S+ M +QP+I Sbjct: 25 GW---IMDLLFRFTSTFGIL--NIGLCIILFTLVTKVLMIPLTIKQQKSSKLMAVMQPEI 79 Query: 397 DELREKFK-----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +++K+K Q ++Q + +Y+ + + GC P+L+Q+P+ FA+Y+VI Sbjct: 80 TAIQKKYKGKESDQKYAMMMQTEIKAVYEKYGTSMTGGCLPLLIQMPIIFALYRVI 135 >gi|225386358|ref|ZP_03756122.1| hypothetical protein CLOSTASPAR_00102 [Clostridium asparagiforme DSM 15981] gi|225047540|gb|EEG57786.1| hypothetical protein CLOSTASPAR_00102 [Clostridium asparagiforme DSM 15981] Length = 412 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 5/94 (5%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-----QSPPQVLQK 413 N G+ I+L T+ KLL PL KQ S+ M +QP++ +++K+K Q ++Q Sbjct: 15 NIGLCIILFTLVTKLLMIPLTIKQQKSSKLMAVMQPELTAIQKKYKGKEGDQKAMMMMQT 74 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +Y+ + + GC P+L+Q+P+ FA+Y+VI Sbjct: 75 ETKAVYEKYGTSMTGGCLPMLIQLPIIFALYRVI 108 >gi|139474368|ref|YP_001129084.1| OxaA-like protein precursor [Streptococcus pyogenes str. Manfredo] gi|134272615|emb|CAM30882.1| membrane protein OxaA 2 precursor [Streptococcus pyogenes str. Manfredo] Length = 307 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 32/227 (14%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQP 394 F+ KPM + YF N G +G+AI++ T+ V+ L PL K Y S M ++P Sbjct: 40 FLGKPMSYFIDYFANNAGLGYGLAIIIVTIIVRTLILPLGLYQSWKASYQSE-KMTFLKP 98 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVIS 448 + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 99 VFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQ 158 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F G DL + + + L F+ W LSM M +S Sbjct: 159 YTKGVSTSTFMGI--DLGSRSLV-LTAIIAALYFFQS-------W-----LSM---MAVS 200 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ + M+ MP++ +F S PAG+ +YW SI+QQ + Sbjct: 201 EEQREQMKTMMYT-MPIMMIFMSFSLPAGVGLYWLVGGFFSIIQQLI 246 >gi|39938735|ref|NP_950501.1| preprotein translocase subunit YidC [Onion yellows phytoplasma OY-M] gi|39721844|dbj|BAD04334.1| preprotein translocase subunit YidC [Onion yellows phytoplasma OY-M] Length = 525 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 23/221 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQVLQKAMI 416 GN G+ I+L T+F++ L +P+ K + NM IQP+I+++++K+ + P QK + Sbjct: 294 GNLGLGIVLATIFIRTLTWPIYTKTSTLSMNMSLIQPEIEKVKQKYALKKDPASAQKMQL 353 Query: 417 QLYKTHNINPLA--GCWPILLQIPVFFAIYKVIS---------ISLEMRHAPFWGWIKDL 465 ++ K + N + G LQ+P+F AI + +S + ++ PF G+I +L Sbjct: 354 EILKVYRKNNFSFWGFLLSFLQLPLFIAINQTLSRFIIPGGIFATDKLIEKPFLGFI-NL 412 Query: 466 AAADPTNIFTLFGILPFYLPGFMHV--------GIWPIIMSLSMFIQMKMSPPPADKGQA 517 ++P N F +F +L F + M + + S + + K ++K Sbjct: 413 NPSNPNNAFVIF-LLSFLVGATMFILNKISFKKPDYLKTPSYYLTSEQKQKAKQSEKSMK 471 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ +M ++ VF S P L +YW N +I Q + K Sbjct: 472 IMSVFMILMMVFFSRSNPI-LSLYWIVGNTYTIFQTLLTRK 511 >gi|269217839|ref|ZP_06161693.1| preprotein translocase, YidC subunit [Actinomyces sp. oral taxon 848 str. F0332] gi|269212774|gb|EEZ79114.1| preprotein translocase, YidC subunit [Actinomyces sp. oral taxon 848 str. F0332] Length = 382 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 99/199 (49%), Gaps = 26/199 (13%) Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQ 436 KQ S+ + IQP++ ++++K+K V +Q+ M +Y+ H +P A C P+L+Q Sbjct: 49 KQIRSSRQAQVIQPEVQKIQKKYKGKKDMVSRRRMQEEMQAVYRKHGTSPFATCLPMLVQ 108 Query: 437 IPVFFAIYKVIS----ISLEMRHAPFWGWIKDLAAA-DPTNIFTLFGILPFYLPGFMH-- 489 +P+ FA+Y+VIS IS R A K+LA + + +F F + Sbjct: 109 MPILFALYRVISAFPGISSGRREA-LGPITKELATDFEKSTVFGAPLATNFRTAASTNSQ 167 Query: 490 --VGIWPIIMSLSMFIQ----MKMSPP--------PADKGQAMILNWMPVVFVFALSSFP 535 +G+ +IMS +MF M+ + P P + Q +++ MP++++F Sbjct: 168 IVIGVLVLIMSATMFYTQHQLMRKNMPESALDKSNPMYRTQQIMMYGMPIMYIFMGGVLQ 227 Query: 536 AGLIIYWSWSNVISIVQQA 554 +++YW N+ ++ QQA Sbjct: 228 VAVLVYWVAGNIWNLCQQA 246 >gi|257785164|ref|YP_003180381.1| 60 kDa inner membrane insertion protein [Atopobium parvulum DSM 20469] gi|257473671|gb|ACV51790.1| 60 kDa inner membrane insertion protein [Atopobium parvulum DSM 20469] Length = 252 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 122/224 (54%), Gaps = 10/224 (4%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W W I ++ +++ + G++G+A++L T+ ++++ P+ KQ S A M +QPK Sbjct: 2 WDW---IVNFLYTVLAGLQSFSGDWGMAVILLTIIIRIILVPMTNKQTASMARMSVVQPK 58 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMR 454 + E++E++ P + + M +LY N NPL GC P+LLQ P+F A++ V + ++ R Sbjct: 59 LKEIQERYADDPVR-QNEEMRKLYAEINFNPLGGCLPLLLQSPIFIALFTVAKMVPVDSR 117 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F+G + +A ++IFT+ G + +P + V ++ + LSM + + S Sbjct: 118 ---FYGILPSIARTT-SDIFTVDGFVS-AIPYMIFVLLFGLTTFLSMAVNARTSSGEQRT 172 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q M+ M ++ ++ + PA +++Y+ S V + QQ +I K Sbjct: 173 QQYMMGGIMTLMMLWFGWTVPAAVLLYYVTSGVWQLAQQQLITK 216 >gi|256381073|ref|YP_003104733.1| 60 kDa inner membrane insertion protein [Actinosynnema mirum DSM 43827] gi|255925376|gb|ACU40887.1| 60 kDa inner membrane insertion protein [Actinosynnema mirum DSM 43827] Length = 358 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/246 (26%), Positives = 108/246 (43%), Gaps = 55/246 (22%) Query: 361 GIAIMLTTVFV-----KLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQ 412 GIA L+ +F+ LLF P Q S M+ P++ ++++K+ +Q Q +Q Sbjct: 29 GIAWALSVIFLVFTLRALLFKPFVG-QVRSMRKMQEFAPELQKIKKKYANDRQRQAQEMQ 87 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK--DLAAADP 470 K L H +NPL GC P+L+QIPVF ++ V+ P WG + D A D Sbjct: 88 K----LQAEHGVNPLGGCLPMLVQIPVFIGLFHVLR-----SFKPGWGEVYFFDKAGVDS 138 Query: 471 TNIFTLFG-------ILP---FYLPGFMHVGIWPIIMSLSMFIQM-----------KMSP 509 LFG +P L + + + L++ + + + Sbjct: 139 FVQAKLFGANLSTFITMPADQLELFSTSRTAVMAVAIPLAVVAAVATHFTGRHSVARQTQ 198 Query: 510 PPADKGQAMILNWMPVVFVFALSS------FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 A+ Q I+N + VV+VF L + FP +++YW +N +++QQ V+ Sbjct: 199 AAAENPQTAIMNKL-VVYVFPLGALAGGFFFPVAILLYWLSNNGWTLMQQRVVY------ 251 Query: 564 IGLIDR 569 G IDR Sbjct: 252 -GRIDR 256 >gi|262278043|ref|ZP_06055830.1| 60 kD inner-membrane protein [alpha proteobacterium HIMB114] gi|262223790|gb|EEY74255.1| 60 kD inner-membrane protein [alpha proteobacterium HIMB114] Length = 142 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 18/148 (12%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD-NSYAAVLID-- 59 N N VA+ LS +++ WQ Y + +E++NIQT Q QVD N A +D Sbjct: 2 ENRNVLVAVILSTLVIMIWQFEYA-----DQYSEQENIQT--QIEQVDQNKPIAPSLDKN 54 Query: 60 -------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 R A+ RV +N ++ GSI+L GA DD+ L+ Y++D +++S V LL+ Sbjct: 55 IKVEKKISREDAIKDVERVSFENDNIKGSISLTGALIDDVILKNYNVDQTTDSKKVVLLN 114 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNT 140 P ++YF E + ++ N +P++ T Sbjct: 115 PKQINDSYFLETGWATSGNET-VPDNQT 141 >gi|325473999|gb|EGC77187.1| inner membrane protein [Treponema denticola F0402] Length = 521 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 23/218 (10%) Query: 345 PMFMLMSYFYNLVGNF-----GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----PK 395 P++M + + + L N G +I+L ++ V ++ P+ ++IQ PK Sbjct: 12 PVYMFVEFVFFLANNITDDYIGASIVLLSIIVNIICLPIYNVAETWQKKERDIQKKLKPK 71 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 ++R F ++ A + H + L G +P+L+QIP FFA YK++S + + Sbjct: 72 TKDIRAVFSGDERYMILSAYYRQNNYHPLYALRGIFPLLIQIPFFFAAYKLLSNLPLLNN 131 Query: 456 APFWGWIKDLAAADP-TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 A FW ++KDL D NI G +++ PI+M++ + Sbjct: 132 ASFW-FLKDLGKPDQLLNI------------GGIYINFLPILMTIINISASAVYSKGLSL 178 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + L VF+ L + P+GL++YW+ +N+ S+++ Sbjct: 179 KEKIQLYLTAAVFLILLYNSPSGLVLYWTLNNLFSLLK 216 >gi|126652600|ref|ZP_01724764.1| OxaA-like protein precursor [Bacillus sp. B14905] gi|126590591|gb|EAZ84708.1| OxaA-like protein precursor [Bacillus sp. B14905] Length = 210 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 38/232 (16%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQP 394 F F+ +P+ + + ++ G++ I ++ T+ V+ + PL AK Q S M +I+P Sbjct: 2 FTFLTQPIIYFIHFIHSFTGSYAIGVISITIAVRAILMPLFIKSAKHQKHSKDLMTSIKP 61 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++D L K K S + ++Q+ + +L + L GC PI++Q+PV F++Y I I Sbjct: 62 ELDVLTAKLKNSHDESEKIMVQQKIQELTSDSLKSSLLGCLPIIIQLPVLFSLYYAIKID 121 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + F W+ +L D +GI II + F+Q +S Sbjct: 122 TVIASENFL-WM-NLGTVD--------------------IGI-SIIACVIYFMQSWLS-- 156 Query: 511 PADKGQAM---ILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIVQQAVIMK 558 DK Q + I+ ++ + + S F PA + IYW+ S ++ VQQ +I K Sbjct: 157 -LDKNQPINMKIMMFINPIMILIFSLFNPAIIPIYWTVSALLLTVQQLIIKK 207 >gi|21909792|ref|NP_664060.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS315] gi|28896515|ref|NP_802865.1| OxaA-like protein precursor [Streptococcus pyogenes SSI-1] gi|209558852|ref|YP_002285324.1| OxaA-like protein precursor [Streptococcus pyogenes NZ131] gi|38503041|sp|Q8K8J2|OXAA2_STRP3 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|21903977|gb|AAM78863.1| putative SpoIIIJ family protein [Streptococcus pyogenes MGAS315] gi|28811769|dbj|BAC64698.1| hypothetical protein [Streptococcus pyogenes SSI-1] gi|209540053|gb|ACI60629.1| Membrane protein oxaA 2 precursor [Streptococcus pyogenes NZ131] Length = 307 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 32/227 (14%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQP 394 F+ KPM + YF N G +G+AI++ T+ V+ L PL K Y S M ++P Sbjct: 40 FLGKPMSYFIDYFANNAGLGYGLAIIIVTIIVRTLILPLGLYQSWKASYQSE-KMAFLKP 98 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVIS 448 + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 99 VFEPINKRIKQANSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQ 158 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F G DL + + + L F+ W LSM M +S Sbjct: 159 YTKGVSTSTFMGI--DLGSRSLV-LTAIIAALYFFQS-------W-----LSM---MAVS 200 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ + M+ MP++ +F S PAG+ +YW SI+QQ + Sbjct: 201 EEQREQMKTMMYT-MPIMMIFMSFSLPAGVGLYWLVGGFFSIIQQLI 246 >gi|315144755|gb|EFT88771.1| putative OxaA-like protein [Enterococcus faecalis TX2141] Length = 310 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 33/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL +KK ++ T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ + Q A + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQRIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFI 503 + + A F G + P I L + G++ +GI Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQGYISMIGI----------- 200 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K +L P++ VF S PAG+ +YW + + +Q A+ Sbjct: 201 -----PEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAI 247 >gi|15674505|ref|NP_268679.1| OxaA-like protein [Streptococcus pyogenes M1 GAS] gi|71910109|ref|YP_281659.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS5005] gi|38503157|sp|Q9A1C3|OXAA2_STRP1 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|13621607|gb|AAK33400.1| hypothetical protein SPy_0351 [Streptococcus pyogenes M1 GAS] gi|71852891|gb|AAZ50914.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS5005] Length = 307 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 32/227 (14%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQP 394 F+ KPM + YF N G +G+AI++ T+ V+ L PL K Y S M ++P Sbjct: 40 FLGKPMSYFIDYFANNAGLGYGLAIIIVTIIVRTLILPLGLYQSWKASYQSE-KMAFLKP 98 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVIS 448 + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 99 VFEPINKRIKQANSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQ 158 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F G DL + + + L F+ W LSM M +S Sbjct: 159 YTKGVSTSTFMGI--DLGSRSLV-LTAIIAALYFFQS-------W-----LSM---MAVS 200 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ + M+ MP++ +F S PAG+ +YW SI+QQ + Sbjct: 201 EEQREQMKTMMYT-MPIMMIFMSFSLPAGVGLYWLVGGFFSIIQQLI 246 >gi|329734155|gb|EGG70473.1| putative stage III sporulation protein J [Staphylococcus epidermidis VCU045] Length = 282 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 33/233 (14%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLA----KKQYVSTAN 388 D +F +PM L+ + N V NFG+AI++ +F++L+ P K ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + A ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F I ++ S Sbjct: 149 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF---------IQAVVSSK 197 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +M P + M++ P++ ++ + L +YWS S + ++Q Sbjct: 198 TM-------PQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQ 243 >gi|260436088|ref|ZP_05790058.1| inner membrane protein OxaA [Synechococcus sp. WH 8109] gi|260413962|gb|EEX07258.1| inner membrane protein OxaA [Synechococcus sp. WH 8109] Length = 395 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 10/113 (8%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ--- 405 ++ +FY LV ++G+AI+ T+ +++ +PL+ S M+ QP I + + + K Sbjct: 32 ILDFFYGLVPSYGLAIVALTLVIRIALYPLSAGSIRSARRMRIAQPVIQKRQAEIKSRYA 91 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + PQ Q+ + + K +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 92 NNPQKQQEELGNVMKEFG-SPLAGCLPLLVQMPILFALFAT------LRGSPF 137 >gi|227519877|ref|ZP_03949926.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis TX0104] gi|227072671|gb|EEI10634.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis TX0104] Length = 310 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 33/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL +KK ++ T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ + Q A + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQRIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFI 503 + + A F G + P I L + G++ +GI Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQGYISMIGI----------- 200 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K +L P++ VF S PAG+ +YW + + +Q A+ Sbjct: 201 -----PEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAI 247 >gi|81428992|ref|YP_395992.1| membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei 23K] gi|78610634|emb|CAI55685.1| Membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei 23K] Length = 329 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 35/235 (14%) Query: 336 WGWFY-FIAKPMFMLMSY---FYNLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +G Y +IA P+ +M F+ + +G AI++ T V+++ PL + K Sbjct: 41 YGSSYKYIAVPLQHIMERIADFFGGINGYGWAIIIITFVVRMILLPLMLNQSNKMTAQQE 100 Query: 388 NMKNIQPKID--ELREKFKQSPPQV--LQKAMIQLYKTHN--INPLAGCWPILLQIPVFF 441 + ++P++D + ++K +P + L + M+++YK ++ + P GC +L+Q+P+F Sbjct: 101 KTRRLKPQLDIVQAQQKVATTPEEKAELSQLMMKVYKENDSSMMPSLGCLTLLIQLPIFS 160 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y+ I S E+ + F+G + P I T+ L FY VG +LS+ Sbjct: 161 GLYQAIQYSPEISSSHFFG----IGLGQPNIIITIIATL-FY------VGQS----ALSL 205 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIVQQAV 555 + P K Q M F +S F PAGL +Y+ +I I+QQ + Sbjct: 206 -----VGMPAEQKKQMQTTVLMSPAITFFISLFAPAGLALYFLAGGMIMIIQQMI 255 >gi|227553936|ref|ZP_03983983.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis HH22] gi|229549423|ref|ZP_04438148.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis ATCC 29200] gi|255972127|ref|ZP_05422713.1| inner membrane protein [Enterococcus faecalis T1] gi|255975194|ref|ZP_05425780.1| inner membrane protein [Enterococcus faecalis T2] gi|256763098|ref|ZP_05503678.1| inner membrane protein [Enterococcus faecalis T3] gi|256853765|ref|ZP_05559130.1| inner membrane protein [Enterococcus faecalis T8] gi|256956682|ref|ZP_05560853.1| inner membrane protein [Enterococcus faecalis DS5] gi|256961301|ref|ZP_05565472.1| inner membrane protein [Enterococcus faecalis Merz96] gi|256963572|ref|ZP_05567743.1| inner membrane protein [Enterococcus faecalis HIP11704] gi|257079637|ref|ZP_05573998.1| inner membrane protein [Enterococcus faecalis JH1] gi|257082017|ref|ZP_05576378.1| inner membrane protein [Enterococcus faecalis E1Sol] gi|257084568|ref|ZP_05578929.1| inner membrane protein [Enterococcus faecalis Fly1] gi|257087436|ref|ZP_05581797.1| inner membrane protein [Enterococcus faecalis D6] gi|257090596|ref|ZP_05584957.1| inner membrane protein [Enterococcus faecalis CH188] gi|257416643|ref|ZP_05593637.1| inner membrane protein [Enterococcus faecalis AR01/DG] gi|257419859|ref|ZP_05596853.1| inner-membrane protein [Enterococcus faecalis T11] gi|293383585|ref|ZP_06629495.1| SpoJ protein [Enterococcus faecalis R712] gi|294780917|ref|ZP_06746271.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis PC1.1] gi|300860707|ref|ZP_07106794.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis TUSoD Ef11] gi|307270839|ref|ZP_07552126.1| putative OxaA-like protein [Enterococcus faecalis TX4248] gi|307271511|ref|ZP_07552783.1| putative OxaA-like protein [Enterococcus faecalis TX0855] gi|307285813|ref|ZP_07565947.1| putative OxaA-like protein [Enterococcus faecalis TX0860] gi|307287716|ref|ZP_07567759.1| putative OxaA-like protein [Enterococcus faecalis TX0109] gi|307290544|ref|ZP_07570456.1| putative OxaA-like protein [Enterococcus faecalis TX0411] gi|312899834|ref|ZP_07759153.1| putative OxaA-like protein [Enterococcus faecalis TX0470] gi|312906136|ref|ZP_07765148.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 512] gi|312909481|ref|ZP_07768336.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 516] gi|312953484|ref|ZP_07772324.1| putative OxaA-like protein [Enterococcus faecalis TX0102] gi|227176922|gb|EEI57894.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis HH22] gi|229305660|gb|EEN71656.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis ATCC 29200] gi|255963145|gb|EET95621.1| inner membrane protein [Enterococcus faecalis T1] gi|255968066|gb|EET98688.1| inner membrane protein [Enterococcus faecalis T2] gi|256684349|gb|EEU24044.1| inner membrane protein [Enterococcus faecalis T3] gi|256710708|gb|EEU25751.1| inner membrane protein [Enterococcus faecalis T8] gi|256947178|gb|EEU63810.1| inner membrane protein [Enterococcus faecalis DS5] gi|256951797|gb|EEU68429.1| inner membrane protein [Enterococcus faecalis Merz96] gi|256954068|gb|EEU70700.1| inner membrane protein [Enterococcus faecalis HIP11704] gi|256987667|gb|EEU74969.1| inner membrane protein [Enterococcus faecalis JH1] gi|256990047|gb|EEU77349.1| inner membrane protein [Enterococcus faecalis E1Sol] gi|256992598|gb|EEU79900.1| inner membrane protein [Enterococcus faecalis Fly1] gi|256995466|gb|EEU82768.1| inner membrane protein [Enterococcus faecalis D6] gi|256999408|gb|EEU85928.1| inner membrane protein [Enterococcus faecalis CH188] gi|257158471|gb|EEU88431.1| inner membrane protein [Enterococcus faecalis ARO1/DG] gi|257161687|gb|EEU91647.1| inner-membrane protein [Enterococcus faecalis T11] gi|291079097|gb|EFE16461.1| SpoJ protein [Enterococcus faecalis R712] gi|294452043|gb|EFG20491.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis PC1.1] gi|300849746|gb|EFK77496.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis TUSoD Ef11] gi|306498399|gb|EFM67904.1| putative OxaA-like protein [Enterococcus faecalis TX0411] gi|306501454|gb|EFM70757.1| putative OxaA-like protein [Enterococcus faecalis TX0109] gi|306502574|gb|EFM71841.1| putative OxaA-like protein [Enterococcus faecalis TX0860] gi|306511783|gb|EFM80781.1| putative OxaA-like protein [Enterococcus faecalis TX0855] gi|306512752|gb|EFM81397.1| putative OxaA-like protein [Enterococcus faecalis TX4248] gi|310627782|gb|EFQ11065.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 512] gi|310628693|gb|EFQ11976.1| putative OxaA-like protein [Enterococcus faecalis TX0102] gi|311290154|gb|EFQ68710.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 516] gi|311293084|gb|EFQ71640.1| putative OxaA-like protein [Enterococcus faecalis TX0470] gi|315025408|gb|EFT37340.1| putative OxaA-like protein [Enterococcus faecalis TX2137] gi|315030217|gb|EFT42149.1| putative OxaA-like protein [Enterococcus faecalis TX4000] gi|315032896|gb|EFT44828.1| putative OxaA-like protein [Enterococcus faecalis TX0017] gi|315035618|gb|EFT47550.1| putative OxaA-like protein [Enterococcus faecalis TX0027] gi|315146680|gb|EFT90696.1| putative OxaA-like protein [Enterococcus faecalis TX4244] gi|315150156|gb|EFT94172.1| putative OxaA-like protein [Enterococcus faecalis TX0012] gi|315152151|gb|EFT96167.1| putative OxaA-like protein [Enterococcus faecalis TX0031] gi|315155338|gb|EFT99354.1| putative OxaA-like protein [Enterococcus faecalis TX0043] gi|315159086|gb|EFU03103.1| putative OxaA-like protein [Enterococcus faecalis TX0312] gi|315161678|gb|EFU05695.1| putative OxaA-like protein [Enterococcus faecalis TX0645] gi|315164815|gb|EFU08832.1| putative OxaA-like protein [Enterococcus faecalis TX1302] gi|315166401|gb|EFU10418.1| putative OxaA-like protein [Enterococcus faecalis TX1341] gi|315170298|gb|EFU14315.1| putative OxaA-like protein [Enterococcus faecalis TX1342] gi|315173668|gb|EFU17685.1| putative OxaA-like protein [Enterococcus faecalis TX1346] gi|315574363|gb|EFU86554.1| putative OxaA-like protein [Enterococcus faecalis TX0309B] gi|315579045|gb|EFU91236.1| putative OxaA-like protein [Enterococcus faecalis TX0630] gi|315580162|gb|EFU92353.1| putative OxaA-like protein [Enterococcus faecalis TX0309A] gi|323481394|gb|ADX80833.1| Oxa1p cytochrome oxidase export family protein [Enterococcus faecalis 62] gi|327535690|gb|AEA94524.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis OG1RF] gi|329572240|gb|EGG53900.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis TX1467] Length = 310 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 33/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL +KK ++ T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ + Q A + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFI 503 + + A F G + P I L + G++ +GI Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQGYISMIGI----------- 200 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K +L P++ VF S PAG+ +YW + + +Q A+ Sbjct: 201 -----PEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAI 247 >gi|254389837|ref|ZP_05005061.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294812826|ref|ZP_06771469.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] gi|326441223|ref|ZP_08215957.1| hypothetical protein SclaA2_09156 [Streptomyces clavuligerus ATCC 27064] gi|197703548|gb|EDY49360.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294325425|gb|EFG07068.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 245 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI++ T V+L PL++ + P++ ELREK +P + L++ + LY Sbjct: 27 AIVVFTALVRLAVHPLSRAAARGQKASARLAPRVAELREKHGGNPER-LRRELADLYAKE 85 Query: 423 NINPLAGCWPILLQIPVFFAIYKVIS 448 +P+AGC P LLQ+P FF +Y + S Sbjct: 86 RTSPVAGCLPSLLQLPAFFVLYHLFS 111 >gi|326804334|ref|YP_004322152.1| stage III sporulation protein J [Aerococcus urinae ACS-120-V-Col10a] gi|326650548|gb|AEA00731.1| stage III sporulation protein J [Aerococcus urinae ACS-120-V-Col10a] Length = 253 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 22/223 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + ++ + + GN +G+ I++ T+ +LL PL Q +T M+ +QP++ Sbjct: 12 WDRYVLYNLSQIIIWLSGVFGNSYGMGIIVFTILARLLLTPLYSLQMKNTEKMQKMQPEL 71 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ Q LQ+ +L + ++ N AGC P+L+Q+P+ A+Y+ IS + + Sbjct: 72 RALQEKYASRDAETQQKLQEETAKLQEKYDTNQFAGCLPLLIQLPILTALYQAISRTEAL 131 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F W+ +L DP F LP V IW S + S + Sbjct: 132 TNGHFL-WM-ELGKPDPY----------FILPIIAAVSIW-----YSTHLSQIASGIKSG 174 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 AM MPV F + + P+ L +Y + +NV +I Q +I Sbjct: 175 SMTAMQY-VMPVFIFFVMMNLPSALALYMATANVFTIGQTLLI 216 >gi|229545175|ref|ZP_04433900.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis TX1322] gi|229309720|gb|EEN75707.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis TX1322] Length = 310 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 33/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL +KK ++ T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ + Q A + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFI 503 + + A F G + P I L + G++ +GI Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQGYISMIGI----------- 200 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K +L P++ VF S PAG+ +YW + + +Q A+ Sbjct: 201 -----PEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAI 247 >gi|257421952|ref|ZP_05598942.1| integral membrane protein [Enterococcus faecalis X98] gi|257163776|gb|EEU93736.1| integral membrane protein [Enterococcus faecalis X98] Length = 309 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 33/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL +KK ++ T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ + Q A + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFI 503 + + A F G + P I L + G++ +GI Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQGYISMIGI----------- 200 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K +L P++ VF S PAG+ +YW + + +Q A+ Sbjct: 201 -----PEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAI 247 >gi|116511365|ref|YP_808581.1| OxaA-like protein precursor [Lactococcus lactis subsp. cremoris SK11] gi|116107019|gb|ABJ72159.1| Preprotein translocase subunit YidC [Lactococcus lactis subsp. cremoris SK11] Length = 320 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 42/255 (16%) Query: 339 FYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQ-YVST---ANMKNIQ 393 + + +PM + F N L +G I+ T+ ++ L PL Q Y ST M + Sbjct: 46 YNLLVRPMSAFVDLFANNLHLGYGWGIIFVTLIIRFLILPLGLNQAYKSTYMQEKMAYLA 105 Query: 394 PKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVI 447 P L+E+ K Q+P + Q+A++ K + IN L+ GC P+L+Q P F A+Y Sbjct: 106 PVFAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSIGCLPMLIQWPFFIALYNAA 165 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504 + + + + F+G +P P + V II + FIQ Sbjct: 166 AYTTGISSSTFYG-------------------IPLGHPSIVLV----IISGVLYFIQTWI 202 Query: 505 --MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + M+P G AM++ ++ VF+ S PAG+ +YW+ + ++QQ +I + Sbjct: 203 STLSMTPEQKKSGMAMLIMSPAMIVVFSFMS-PAGVALYWAVGGFVIVIQQVIITFIMKP 261 Query: 563 EIGLIDRLRSTFSKN 577 + R+ F+KN Sbjct: 262 R--MRRRIDEEFTKN 274 >gi|256617039|ref|ZP_05473885.1| inner membrane protein [Enterococcus faecalis ATCC 4200] gi|307277162|ref|ZP_07558266.1| putative OxaA-like protein [Enterococcus faecalis TX2134] gi|256596566|gb|EEU15742.1| inner membrane protein [Enterococcus faecalis ATCC 4200] gi|306506092|gb|EFM75258.1| putative OxaA-like protein [Enterococcus faecalis TX2134] Length = 310 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 33/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL +KK ++ T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ + Q A + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFI 503 + + A F G + P I L + G++ +GI Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQGYISMIGI----------- 200 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K +L P++ VF S PAG+ +YW + + +Q A+ Sbjct: 201 -----PEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAI 247 >gi|242372092|ref|ZP_04817666.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis M23864:W1] gi|242350204|gb|EES41805.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis M23864:W1] Length = 275 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 33/231 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G FY KPM L+ + L N+G+AI++ + V+ + PL K ++ K Sbjct: 31 GIFYNTFVKPMDGLLHFLGRLFHDNYGLAIIVIVLIVRFILLPLMLIQVKNMHMMREKTK 90 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQL----YKTHNINP---LAGCWPILLQIPVFFAI 443 ++P++D +REK K + Q + A QL YK++ INP + GC P+++QIP+ + Sbjct: 91 VVKPELDAIREKIKNADSQEERNAANQLLMKKYKSYGINPFKNMIGCLPVIIQIPILMGL 150 Query: 444 YKVIS--ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y + S + P + W +P I T+ ++ I P++ S+ Sbjct: 151 YMSLKYPTSDGITKYPHFLWFN---LTEPNLIMTIIAASMYF--------IQPLVNSIH- 198 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P +I+ P+ +A + + L +YWS S I+Q Sbjct: 199 ------YPKDQRTTYYVIMVVSPIFITYASLTSASALGLYWSISAGFLIIQ 243 >gi|291299759|ref|YP_003511037.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis DSM 44728] gi|290568979|gb|ADD41944.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis DSM 44728] Length = 235 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 1/85 (1%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ V+LL PL++ + + PK+ EL+ + Q L A +LY+T Sbjct: 28 IVVFTIAVRLLLHPLSRAAVRGEKTRQRLAPKMAELKRRHGDDR-QRLVDATGELYRTEG 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVIS 448 PL GC P+LLQ+PVFF +Y++ + Sbjct: 87 STPLTGCLPMLLQLPVFFVMYRLFT 111 >gi|238566367|ref|XP_002386052.1| hypothetical protein MPER_15880 [Moniliophthora perniciosa FA553] gi|215436820|gb|EEB86982.1| hypothetical protein MPER_15880 [Moniliophthora perniciosa FA553] Length = 202 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 77/146 (52%), Gaps = 17/146 (11%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP--- 408 +F N V +G I+LT + ++ FP A + + + +QP+I+EL E+ ++ Sbjct: 54 HFLNPVLPWGYTIILTALLFRVATFPFAVRSIRFASRVTPLQPRINELNEQMREMAEKRD 113 Query: 409 ----QVLQKAMIQLYKTHNINPLAGCWPILLQIPV----FFAIYKVI---SISLEMRHAP 457 Q +++ Q++K ++PL G L+QIPV FF I ++ ++ +++H Sbjct: 114 MVGLQRIRQEQFQVFKDAGVHPLGGAVSGLVQIPVAIGGFFGIKNMLTEPTVVTQLQHNT 173 Query: 458 FWGW--IKDLAAADPTNIFTL-FGIL 480 + W I DLAA DPT + + FG++ Sbjct: 174 GFEWMGITDLAATDPTGVLPVAFGVM 199 >gi|125623406|ref|YP_001031889.1| OxaA-like protein precursor [Lactococcus lactis subsp. cremoris MG1363] gi|124492214|emb|CAL97143.1| Membrane protein oxaA 2 precursor [Lactococcus lactis subsp. cremoris MG1363] gi|300070153|gb|ADJ59553.1| OxaA-like protein precursor [Lactococcus lactis subsp. cremoris NZ9000] Length = 320 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 42/255 (16%) Query: 339 FYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQ-YVST---ANMKNIQ 393 + + +PM + F N L +G I+ T+ ++ L PL Q Y ST M + Sbjct: 46 YNLLVRPMSAFVDLFANNLHLGYGWGIIFVTLIIRFLILPLGLNQAYKSTYMQEKMAYLA 105 Query: 394 PKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVI 447 P L+E+ K Q+P + Q+A++ K + IN L+ GC P+L+Q P F A+Y Sbjct: 106 PVFAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSIGCLPMLIQWPFFIALYNAA 165 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504 + + + + F+G +P P + V II + FIQ Sbjct: 166 AYTTGISSSTFYG-------------------IPLGHPSIVLV----IISGVLYFIQTWI 202 Query: 505 --MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + M+P G AM++ ++ VF+ S PAG+ +YW+ + ++QQ +I + Sbjct: 203 STLSMTPEQKKSGMAMLIMSPAMIVVFSFMS-PAGVALYWAVGGFVIVIQQVIITFIMKP 261 Query: 563 EIGLIDRLRSTFSKN 577 + R+ F+KN Sbjct: 262 R--MRRRIDEEFTKN 274 >gi|68160684|gb|AAY86788.1| lr0252 [Lactobacillus reuteri] Length = 277 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 23/203 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G +G+ I++ T+ ++++ PL Q + + + P++ +++K+ + +QK ++ Sbjct: 57 GGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQLKAIQKKYSSRDRESMQKMQME 116 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK +NP A P+L+Q+PV + +Y+ I + +R+ F W++ L DP Sbjct: 117 THKLYKEAGVNPWASMLPLLVQLPVMWGLYQAIWRTSALRNGTFL-WLQ-LGHPDP---- 170 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSS 533 + I+P F + W + M+ P + W MP++ F Sbjct: 171 --YYIMPILAALFTFISSW-----------LSMASMPEKNSMTTTMTWFMPIMVFFMALG 217 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 F + + +YW +N +VQ +I Sbjct: 218 FSSAITLYWVVTNAFQVVQTLII 240 >gi|87304138|ref|ZP_01086681.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 5701] gi|87281451|gb|EAQ73515.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 5701] Length = 366 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 10/110 (9%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---QSPP 408 +FY LV ++G+AI+ T+ +++ +PL+ S M+ QP + + + K S P Sbjct: 2 FFYGLVPSYGLAIVALTLVIRVALYPLSAGSIRSARRMRIAQPVMQKRQADIKARYASNP 61 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 Q Q+ + ++ K +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 62 QKQQEELGKVMKEFG-SPLAGCLPLLVQMPILFALFAT------LRGSPF 104 >gi|27468926|ref|NP_765563.1| lipoprotein precursor [Staphylococcus epidermidis ATCC 12228] gi|57865393|ref|YP_189577.1| hypothetical protein SERP2021 [Staphylococcus epidermidis RP62A] gi|251811869|ref|ZP_04826342.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis BCM-HMP0060] gi|282875157|ref|ZP_06284030.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis SK135] gi|293367134|ref|ZP_06613805.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|38502987|sp|Q8CMK4|OXAA1_STAES RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|81673373|sp|Q5HLG6|OXAA1_STAEQ RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|27316474|gb|AAO05649.1|AE016750_254 lipoprotein precursor [Staphylococcus epidermidis ATCC 12228] gi|57636051|gb|AAW52839.1| membrane protein, putative [Staphylococcus epidermidis RP62A] gi|251804666|gb|EES57323.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis BCM-HMP0060] gi|281295922|gb|EFA88443.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis SK135] gi|291318695|gb|EFE59070.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|329734603|gb|EGG70914.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU045] gi|329735021|gb|EGG71318.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU028] Length = 278 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 35/209 (16%) Query: 359 NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 N+G AI+ + V+ + P K ++ K +QP++D +R+K K + Q + A Sbjct: 53 NYGFAIISIVLIVRFILLPFMLIQVKNMHMMREKTKVVQPELDAIRDKMKHATSQEERNA 112 Query: 415 MIQL----YKTHNINPLA---GCWPILLQIPVFFAIYKVISISLEMRHA----PFWGWIK 463 QL Y+++ INPL GC P+L+Q+P+ +Y +S+ H P + W Sbjct: 113 ANQLLMKKYQSYGINPLKNMLGCLPVLIQMPILMGLY--MSLKYPSSHGITEYPHFLWF- 169 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL P I T+ + ++ + P++ S+ P K ++ + Sbjct: 170 DL--TQPDLIMTIIAAIMYF--------VQPLVNSIH-------YPKDQRKTYYFMMVFS 212 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P+ +A A L +YWS S IVQ Sbjct: 213 PIFITYASLHSAAALGLYWSISAAFLIVQ 241 >gi|319940011|ref|ZP_08014365.1| membrane protein oxaA 1 [Streptococcus anginosus 1_2_62CV] gi|319810725|gb|EFW07052.1| membrane protein oxaA 1 [Streptococcus anginosus 1_2_62CV] Length = 271 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 29/211 (13%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q ++ M+ QP + EL+ K+ Sbjct: 47 FLSFNGSTGIGIILFTLIIRTVLLPVFQLQINASRKMQEAQPLVKELQAKYPGRDMESRS 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L + +LYK + P A WP+L+Q+PV A+Y ++ +E + W+ +L A D Sbjct: 107 RLAEETQKLYKELGVKPSASFWPLLIQMPVLIALYHALT-RVEFLKVGHFLWL-NLGATD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV---- 525 P I P++ ++ F+ +S + ++ M V Sbjct: 165 PYYIL-------------------PVLAAVFTFLSTWLSNKGMAERNGLMTGMMFVMPLF 205 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 VF FA+ S +G+ +YWS S + Q ++ Sbjct: 206 VFFFAM-SVASGVALYWSTSYAYQVFQTLLL 235 >gi|307110546|gb|EFN58782.1| hypothetical protein CHLNCDRAFT_140542 [Chlorella variabilis] Length = 426 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 36/232 (15%) Query: 345 PMFMLMSYFYNLVGNFGI----AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL- 399 P ++ L G G+ +IM+ T ++L P+ Q +T M +P+++ L Sbjct: 159 PTRLIQGLLTGLHGALGLEWWQSIMVATCAMRLATLPIMIMQIKNTYRMSLARPEMEVLM 218 Query: 400 ----REKFKQSPPQVL--QKAMIQLYKTHNINPLAGCWPILLQIPVF---------FAIY 444 E+ K + L Q+ ++ ++K +N NP +L+Q P+F FA + Sbjct: 219 NHVKEEQAKGNMEAALEHQQHVMAVWKKYNCNPFKSMAGMLVQAPIFIGFFSALRGFAAH 278 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 KV S++ W DL ADPT + L F L + L Sbjct: 279 KVPSLTEGGAL-----WFTDLTVADPTYMLPALAGLSFLL-----------TIELGAADG 322 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M+ PP K ++ + +V A ++ PA + +YWS SNV S++Q +++ Sbjct: 323 MQGQPPEMQKKLKNVMRVVALVIPLASTALPASVFMYWSASNVFSLLQTSLL 374 >gi|295099702|emb|CBK88791.1| protein translocase subunit yidC [Eubacterium cylindroides T2-87] Length = 330 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 42/231 (18%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ--- 417 G+ I++TT+ ++L+ F +K +S+ M+ IQP++ +++ K+K + M Q Sbjct: 114 GVGIIVTTLLIQLIVFMFTRKSQMSSQRMQEIQPEMQKIQNKYKDKTDDRSKMMMYQETQ 173 Query: 418 -LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT- 475 LYK ++I+P + +Q+P+ +Y + + + F+G + P + FT Sbjct: 174 NLYKKYDIHPFGSILVMFIQLPIMMGMYYATMRAASVVYGSFFGL---PFSGTPIDGFTQ 230 Query: 476 -LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---------------SPPPADKGQAMI 519 FG + Y ++M + + MKM A++ Q + Sbjct: 231 MQFGYIIIY-----------VLMIVCQLLSMKMPQILKKIQDKKDHVKEKKYAEENQNSM 279 Query: 520 LNWMPVVFVFALS-------SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +N M F+ + S+P + YW S++I I+Q V+ K+ + Sbjct: 280 MNTMNTTMYFSTAMIAFLYISWPIAMSFYWLVSSIIRIIQSVVLHKIMNKD 330 >gi|293387301|ref|ZP_06631858.1| SpoJ protein [Enterococcus faecalis S613] gi|291083338|gb|EFE20301.1| SpoJ protein [Enterococcus faecalis S613] Length = 292 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 33/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL +KK ++ T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ + Q A + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFI 503 + + A F G + P I L + G++ +GI Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQGYISMIGI----------- 200 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K +L P++ VF S PAG+ +YW + + +Q A+ Sbjct: 201 -----PEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAI 247 >gi|283782566|ref|YP_003373320.1| membrane protein insertase, YidC/Oxa1 family [Gardnerella vaginalis 409-05] gi|283441507|gb|ADB13973.1| membrane protein insertase, YidC/Oxa1 family [Gardnerella vaginalis 409-05] Length = 337 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 124/253 (49%), Gaps = 40/253 (15%) Query: 337 GWFYFIAKP----MFMLMSYFYNLVGNFGI---------AIMLTTVFVKLLFFPLAKKQY 383 GWFY I P M +MS F+ L+ G+ +I+ + V FP K Sbjct: 15 GWFYKILTPVEWLMTQIMSLFHKLLTLLGMNEVGFSWVFSIVFLVLVVHACIFPAFIKSI 74 Query: 384 VSTANMKNIQPKIDELRE----KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 M+ I PKI ++++ K + + +Q+ M++LY+ + NP C P+++Q P Sbjct: 75 KGMRKMQAIAPKIKKIQQKYKGKNDPASKEAMQREMMKLYQDNKANPAGSCLPMMIQGPA 134 Query: 440 FFAIYKVISI---SLEMRHAPFWGWIKDLAAAD---PTNIFTLFGILPFYL----PGFMH 489 F +I+ +S+ +HA + D+A A T +F + G+ ++ G + Sbjct: 135 FMSIWYTLSVIPFIARGKHAALGAF--DIATAQQFVKTRVFGV-GVADTFMTTAGAGKIV 191 Query: 490 VGIWPIIMSLSM-FIQM----KMSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLI 539 + I+ ++M +M ++Q K PP + +G Q +++ P+++VF+ + P ++ Sbjct: 192 IVIFVVLMCAAMWYMQFNNIRKNLPPESKQGSQYTVQKLMMWGFPLIYVFSAFAMPFAML 251 Query: 540 IYWSWSNVISIVQ 552 +YW +NVI++++ Sbjct: 252 VYWLVNNVINMLR 264 >gi|329726436|gb|EGG62899.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU144] Length = 278 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 40/223 (17%) Query: 350 MSYFYNLVG-----NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELR 400 M F +++G N+G AI+ + V+ + P K ++ K +QP++D +R Sbjct: 39 MDGFLHILGRVFQDNYGFAIISIVLIVRFILLPFMLIQVKNMHMMREKTKVVQPELDAIR 98 Query: 401 EKFKQSPPQVLQKAMIQL----YKTHNINPLA---GCWPILLQIPVFFAIYKVISISLEM 453 +K K + Q + A QL Y+++ INPL GC P+L+Q+P+ +Y +S+ Sbjct: 99 DKMKHATSQKERNAANQLLLKKYQSYGINPLKNMLGCLPVLIQMPILMGLY--MSLKYPS 156 Query: 454 RHA----PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 H P + W DL P I T+ + ++ + P++ S+ P Sbjct: 157 SHGITEYPHFLWF-DL--TQPDLIMTIIAAIMYF--------VQPLVNSIH-------YP 198 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 K ++ + P+ +A A L +YWS S IVQ Sbjct: 199 KDQRKTYYFMMVFSPIFITYASLHSAAALGLYWSISAAFLIVQ 241 >gi|242243775|ref|ZP_04798219.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis W23144] gi|242232778|gb|EES35090.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis W23144] Length = 278 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 35/209 (16%) Query: 359 NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 N+G AI+ + V+ + P K ++ K +QP++D +R+K K + Q + A Sbjct: 53 NYGFAIISIVLIVRFILLPFMLIQVKNMHMMREKTKVVQPELDAIRDKMKHATSQEERNA 112 Query: 415 MIQL----YKTHNINPLA---GCWPILLQIPVFFAIYKVISISLEMRHA----PFWGWIK 463 QL Y+++ INPL GC P+L+Q+P+ +Y +S+ H P + W Sbjct: 113 ANQLLLKKYQSYGINPLKNMLGCLPVLIQMPILMGLY--MSLKYPSSHGITEYPHFLWF- 169 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL P I T+ + ++ + P++ S+ P K ++ + Sbjct: 170 DL--TQPDLIMTIIAAIMYF--------VQPLVNSIH-------YPKDQRKTYYFMMVFS 212 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P+ +A A L +YWS S IVQ Sbjct: 213 PIFITYASLHSAAALGLYWSISAAFLIVQ 241 >gi|213966247|ref|ZP_03394431.1| preprotein translocase YidC subunit [Corynebacterium amycolatum SK46] gi|213951099|gb|EEB62497.1| preprotein translocase YidC subunit [Corynebacterium amycolatum SK46] Length = 382 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+L V +++L F Q S M+ + P++ ++EK+K Q AM QL K Sbjct: 34 LAIILLVVTIRILLFKPMLNQQRSAIKMQQLAPEMQAIKEKYKNDQ-QAQALAMRQLQKE 92 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 +NPL GC PIL+Q+PVF ++ V+ Sbjct: 93 MGVNPLGGCLPILVQMPVFIGLFHVL 118 >gi|319400148|gb|EFV88383.1| 60Kd inner membrane family protein [Staphylococcus epidermidis FRI909] Length = 278 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 40/223 (17%) Query: 350 MSYFYNLVG-----NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELR 400 M F + +G N+G AI+ + V+ + P K ++ K +QP++D +R Sbjct: 39 MDEFLHFLGKVFQDNYGFAIISIVLIVRFILLPFMLIQVKNMHMMREKTKVVQPELDAIR 98 Query: 401 EKFKQSPPQVLQKAMIQL----YKTHNINPLA---GCWPILLQIPVFFAIYKVISISLEM 453 +K K + Q + A QL Y+++ INPL GC P+L+Q+P+ +Y +S+ Sbjct: 99 DKIKHATSQEERNAANQLLLKKYQSYGINPLKNMLGCLPVLIQMPILMGLY--MSLKYPS 156 Query: 454 RHA----PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 H P + W DL P I T+ + ++ + P++ S+ P Sbjct: 157 SHGITEYPHFLWF-DL--TQPDLIMTIIAAIMYF--------VQPLVNSIH-------YP 198 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 K ++ + P+ +A A L +YWS S IVQ Sbjct: 199 KDQRKTYYFMMVFSPIFITYASLHSAAALGLYWSISAAFLIVQ 241 >gi|298253034|ref|ZP_06976826.1| preprotein translocase subunit YidC [Gardnerella vaginalis 5-1] gi|297532429|gb|EFH71315.1| preprotein translocase subunit YidC [Gardnerella vaginalis 5-1] Length = 337 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 123/253 (48%), Gaps = 40/253 (15%) Query: 337 GWFYFIAKP----MFMLMSYFYNLVGNFGI---------AIMLTTVFVKLLFFPLAKKQY 383 GWFY I P M +MS F+ L+ G+ +I+ + V FP K Sbjct: 15 GWFYKILTPVEWFMTQIMSLFHKLLTLLGMNEVGFSWVFSIVFLVLVVHACIFPAFIKSI 74 Query: 384 VSTANMKNIQPKIDELRE----KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 M+ I PKI ++++ K + + +Q+ M++LY+ + NP C P+++Q P Sbjct: 75 KGMRKMQAIAPKIKKIQQKYKGKNDPASKEAMQREMMKLYQDNKANPAGSCLPMMIQGPA 134 Query: 440 FFAIY---KVISISLEMRHAPFWGWIKDLAAAD---PTNIFTLFGILPFYL----PGFMH 489 F +I+ VI +HA + D+A A T +F + G+ ++ G + Sbjct: 135 FMSIWYTLSVIPFIARGKHAALGAF--DIATAQQFVKTRVFGV-GVADTFMTTAGAGKIV 191 Query: 490 VGIWPIIMSLSM-FIQM----KMSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLI 539 + I+ ++M +M ++Q K PP + +G Q +++ P+++VF+ + P ++ Sbjct: 192 IVIFVVLMCAAMWYMQFNNIRKNLPPESKQGSQYTVQKLMMWGFPLIYVFSAFAMPFAML 251 Query: 540 IYWSWSNVISIVQ 552 +YW +NVI++++ Sbjct: 252 VYWLVNNVINMLR 264 >gi|306834795|ref|ZP_07467859.1| membrane protein OxaA [Corynebacterium accolens ATCC 49726] gi|304569323|gb|EFM44824.1| membrane protein OxaA [Corynebacterium accolens ATCC 49726] Length = 304 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+L T +K L Q S+ M+ IQPK+ E+R K+ + + Q+ M ++YK Sbjct: 11 LAIVLLTWTLKALMVKPTVSQIRSSRKMQEIQPKVQEIRAKYGKDQARAAQE-MQKVYKD 69 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 + P+AGC P+L+QIP+F ++ V+ Sbjct: 70 AGVRPMAGCLPVLVQIPMFIGLFHVL 95 >gi|315222384|ref|ZP_07864289.1| putative stage III sporulation protein J [Streptococcus anginosus F0211] gi|315188545|gb|EFU22255.1| putative stage III sporulation protein J [Streptococcus anginosus F0211] Length = 271 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 37/215 (17%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q ++ M+ QP + EL+ K+ Sbjct: 47 FLSFNGSTGIGIILFTLIIRTVLLPVFQLQINASRKMQEAQPLVKELQAKYPGRDMESRS 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L + +LYK + P A WP+L+Q+PV A+Y ++ +E + W+ +L A D Sbjct: 107 RLAEETQKLYKELGVKPSASFWPLLIQMPVLIALYHALT-RVEFLKVGHFLWL-NLGATD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-------ILNW 522 P + ILP F + W ++KG A ++ Sbjct: 165 P------YYILPVLAAVFTFLSTW-----------------LSNKGMAERNGLMTGMMFV 201 Query: 523 MPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 MP+ VF FA+ S +G+ +YWS S + Q ++ Sbjct: 202 MPLFVFFFAM-SVASGVALYWSTSYAYQVFQTLLL 235 >gi|327285652|ref|XP_003227547.1| PREDICTED: mitochondrial inner membrane protein OXA1L-like [Anolis carolinensis] Length = 421 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 92/206 (44%), Gaps = 27/206 (13%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQV-LQKAM--I 416 AI+ TV + L FPL K + N P+I +L + KQS + KA + Sbjct: 136 AIVAGTVVARCLVFPLIVKGQREAVKLNNHLPQITQLTTRMNEAKQSGNKFEFAKAYSDL 195 Query: 417 QLY-KTHNINPLAGCWPILLQIPVFFAIYKVISISLE-----MRHAPFWGWIKDLAAADP 470 LY KTHN+NPL G L+Q P+F + + + E M+ W W DL AADP Sbjct: 196 ALYQKTHNVNPLRGFLVPLVQAPIFISFFIALRKMAELPVPSMQTGGLW-WFADLTAADP 254 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 + LP + V +W I L + + +S P + + MP+ + Sbjct: 255 Y----------YILPLAVTVTMWAI---LELGAESGVSNP-NLRVMKTVFRVMPIAILPL 300 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVI 556 SFP + YW SN+ S+VQ V+ Sbjct: 301 TISFPTAIFTYWMTSNLFSLVQVGVL 326 >gi|307185547|gb|EFN71509.1| Mitochondrial inner membrane protein OXA1L [Camponotus floridanus] Length = 413 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 36/210 (17%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQKAM 415 I++ T+ V++L FP+ K + N N P I EL+ K ++ + M Sbjct: 138 TIVIGTICVRVLIFPIVIKAQKNMINFSNCMPVITELQMKMTEARQNGDHFESARIANEM 197 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLE-MRHAPFWGWIKDLAAADP 470 +Q K ++++P+ L+Q PVF A+ + + +E +++ FW W+ DL DP Sbjct: 198 MQYMKKNDVSPVKNFIVPLIQAPVFLSFFLALRGMANTPVESLKYGGFW-WLHDLTVHDP 256 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-KGQAM---ILNWMPVV 526 +Y I PI+ S++M+I +++ + K M +L +P + Sbjct: 257 -----------YY--------IMPIVTSVTMYITIELGADGTNLKSMGMFRYVLRAVPFI 297 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + + FP ++ YW +N +S+VQ ++ Sbjct: 298 ILPFMIHFPGAILTYWVSTNFVSLVQTGIL 327 >gi|70725945|ref|YP_252859.1| lipoprotein [Staphylococcus haemolyticus JCSC1435] gi|82593013|sp|Q4L7X2|OXAA_STAHJ RecName: Full=Membrane protein oxaA; Flags: Precursor gi|68446669|dbj|BAE04253.1| lipoprotein precursor [Staphylococcus haemolyticus JCSC1435] Length = 291 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 44/237 (18%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 G+FY +PM ++ + + V N +GIAI++ + ++++ P K ++ M Sbjct: 30 GFFYNTFVEPMSKVLHWLGHSVFNDDYGIAIIVLVLVIRIILLPFMLSNYKNSHLMREKM 89 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P++D ++EK K++ Q + A M+++YK ++INP+ GC P+L+Q+PV Sbjct: 90 KVAKPEVDGVQEKVKRARTQEEKMAANQEMMEVYKKYDINPMKSALGCLPVLIQMPVVMG 149 Query: 443 IYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-PIIMSL 499 +Y V+ I + P + W +H IW II + Sbjct: 150 LYFVLRYRIGGGIAEHPHFLWF-----------------------NLIHPDIWITIIAGV 186 Query: 500 SMFIQM----KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 FIQ K P + M++ P++ ++ S + L +YWS S +VQ Sbjct: 187 LYFIQAWVSSKQMPQEQRQMTYMMMIVSPIMIIWISLSSASALGLYWSVSAAFLVVQ 243 >gi|302024343|ref|ZP_07249554.1| membrane protein OxaA 2 precursor [Streptococcus suis 05HAS68] Length = 249 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 29/207 (14%) Query: 359 NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 FG+AI++ T+ V+ + PL K + + M ++P + ++E+ K + Q Q A Sbjct: 3 RFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYLKPILGPIQERMKNASSQEEQLA 62 Query: 415 MIQLY----KTHNINPLAG--CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q Y K + ++ L G C P+L+Q+P F AIY + + A F G + Sbjct: 63 AQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFAARHTPGISEATFLG----INLG 118 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 + I T+ + +Y + S+ +Q+ M + + M L ++ + Sbjct: 119 STSLILTVVAGILYY--------------AQSLLMQVGMDEEQKKQMKTMALMNPIMIMM 164 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAV 555 F+ S PAG+ +YW + I+QQA+ Sbjct: 165 FSFGS-PAGVTLYWVVGGLFGILQQAI 190 >gi|312905127|ref|ZP_07764248.1| putative OxaA-like protein [Enterococcus faecalis TX0635] gi|310631517|gb|EFQ14800.1| putative OxaA-like protein [Enterococcus faecalis TX0635] Length = 310 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 33/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL +KK ++ T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ + Q A + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFI 503 + + A F G + P I L + G++ +GI Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQGYISMIGI----------- 200 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K +L P++ VF S PAG+ +YW + + +Q A+ Sbjct: 201 -----PEEQKKTMKSMLIVPPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAI 247 >gi|325265447|ref|ZP_08132170.1| membrane protein insertase, YidC/Oxa1 family [Clostridium sp. D5] gi|324029305|gb|EGB90597.1| membrane protein insertase, YidC/Oxa1 family [Clostridium sp. D5] Length = 429 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 10/123 (8%) Query: 335 DWGWFYFIAKPMFMLMSYFYNL------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 DW + I+ + LM+ YN+ + N GI I+L T+ + L PL KQ + Sbjct: 11 DWPIIHQISWLLGKLMNGIYNVLDGLFGIQNIGICIILFTIVIYTLMIPLTIKQQKWSKM 70 Query: 389 MKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 + P+I ++++K+ Q Q+ M +Y+ + +P GC P+L+Q+PV FA+Y Sbjct: 71 SSVMNPEIQKIQKKYANKKDQASMLKQQEEMQAIYEKYGTSPTGGCLPMLIQMPVLFALY 130 Query: 445 KVI 447 VI Sbjct: 131 PVI 133 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%) Query: 494 PIIMSLSMFIQMKMSPPP-ADKGQAM------ILNWMPVVFVFALSSFPAGLIIYWSWSN 546 PI+ L+ F+ +K+ P P D M + MP+ VF + PAGL +YW+ S Sbjct: 259 PIMAGLTQFLSVKLQPQPQVDPSNTMANSMKTMTYTMPLFSVFMGFTLPAGLGLYWAISA 318 Query: 547 VISIVQQAVIMKMHGAE 563 ++ VQQ I K G + Sbjct: 319 LVRCVQQLAINKYLGKK 335 >gi|320547389|ref|ZP_08041678.1| membrane protein [Streptococcus equinus ATCC 9812] gi|320447985|gb|EFW88739.1| membrane protein [Streptococcus equinus ATCC 9812] Length = 305 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 32/230 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQ 393 + + +PM L+ YF N V FG+AI+L T+ V+ + PL K Y S M ++ Sbjct: 39 HVLGEPMAKLIQYFANNVDLGFGLAIILVTIIVRCIILPLGLYQSWKASYQSE-KMAYLK 97 Query: 394 PKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P + E+ + + Q Q ++ K + IN L G C P+L+Q+P F A+Y Sbjct: 98 PIFAPINERMRNAKTQEEKLAAQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAA 157 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + + + F G DL + + IL F+ W +S+ + + Sbjct: 158 QYTNGVAESTFLGI--DLGTRSML-LTAVIAILYFFQS-------W---LSMQAVAEEQR 204 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + A KG + MP++ VF S PA +++YW SI+QQ + M Sbjct: 205 A---AMKGTMYV---MPLMMVFFGMSMPASVLLYWLVGGFFSIIQQLITM 248 >gi|160893416|ref|ZP_02074201.1| hypothetical protein CLOL250_00965 [Clostridium sp. L2-50] gi|156864811|gb|EDO58242.1| hypothetical protein CLOL250_00965 [Clostridium sp. L2-50] Length = 465 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 8/110 (7%) Query: 346 MFMLMSYFYNLVG----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 M+ L+ N +G N I ++L T F++ FPL KQ S+ M IQP+I++ + Sbjct: 25 MYKLIELISNSMGIGYVNLSICVILFTFFIRACLFPLNFKQQKSSKIMSFIQPEINKATK 84 Query: 402 KFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 K+ Q Q+ ++ K + ++ +GC P L+Q+PVF+ +Y+VI Sbjct: 85 KYNNKTDQESLMKKQQETQKIQKKYGVSLTSGCLPTLIQLPVFYGLYRVI 134 >gi|227502237|ref|ZP_03932286.1| inner membrane protein translocase component YidC [Corynebacterium accolens ATCC 49725] gi|227077061|gb|EEI15024.1| inner membrane protein translocase component YidC [Corynebacterium accolens ATCC 49725] Length = 327 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+L T +K L Q S+ M+ IQPK+ E+R K+ + + Q+ M ++YK Sbjct: 34 LAIVLLTWTLKALMVKPTVAQIRSSRKMQEIQPKVQEIRAKYGKDQARAAQE-MQKVYKD 92 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 + P+AGC P+L+QIP+F ++ V+ Sbjct: 93 AGVRPMAGCLPVLVQIPMFIGLFHVL 118 >gi|221136502|ref|XP_002171142.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 131 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 11/118 (9%) Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQL---YK 420 TV + L FPL K +TA + ++P++++L+EK +++ P + +A I+L +K Sbjct: 1 TVAFRALVFPLMIKGQANTARLAAVKPELEKLQEKLREAANYHNPNIRAQASIELQDFFK 60 Query: 421 THNINPLAGCWPILLQIPV----FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 HN NPL L+Q+P+ F AI K+ ++ +E W DL+AADP IF Sbjct: 61 KHNCNPLKSIISPLVQLPLFISFFIAIRKMCNLPVESLQTGGILWFSDLSAADPYMIF 118 >gi|210634757|ref|ZP_03298285.1| hypothetical protein COLSTE_02212 [Collinsella stercoris DSM 13279] gi|210158697|gb|EEA89668.1| hypothetical protein COLSTE_02212 [Collinsella stercoris DSM 13279] Length = 259 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 64/112 (57%), Gaps = 4/112 (3%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W W I + +F + G++G++I++ V ++L P+ K STA M+ +QPK Sbjct: 2 WDW---IVQILFQALQLIQGFAGDWGLSIIILVVIIRLALTPMMLKSTKSTARMQVLQPK 58 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + E++E++ PQ + M + Y + NPL GC P+L+Q+P+ A++ ++ Sbjct: 59 LMEIQERYADD-PQRQAEEMQKFYSENKFNPLGGCLPLLIQMPILIALFNLL 109 >gi|115252808|emb|CAK98244.1| conserved hypothetical transmembrane protein [Spiroplasma citri] Length = 426 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 15/229 (6%) Query: 336 WGWFYF-IAKPMFMLMSYFYNLVGNFGI--AIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +G F F +A + L+ F L GI A+ LT++ V+L+ + K + M+ + Sbjct: 115 YGCFVFPVAWILVNLIYGFGGLDNGAGIIGALFLTSLIVRLITLMFSWKAQRNQDKMQLM 174 Query: 393 QPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 Q K E++ K+K S Q Q M+QLY+ ++PL+ L IP A+Y V+ Sbjct: 175 QIKQAEIQAKYKDSKDPAAKQKQQMEMMQLYRKEGVSPLSTIGSSFLSIPFLIAMYTVVR 234 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFT-----LFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + E++ A G I + P ++ T +L YLP + I P I++L Sbjct: 235 ATRELKMATI-GQISLI--EKPWDMITSGNYVYLALLFVYLPIQILSMILPTILNLRKTR 291 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + A K Q ++ M VVF S +G+ IYW +S I I+Q Sbjct: 292 VITKEQKKARKRQFIMQGVMIVVFFVVTISIASGVAIYWIFSAFIQILQ 340 >gi|325478864|gb|EGC81974.1| membrane protein insertase, YidC/Oxa1 family [Anaerococcus prevotii ACS-065-V-Col13] Length = 232 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 40/220 (18%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + IAI+L T+ V L+ P+ Q K +PK++E+++K+ Q++Q+ M QLY Sbjct: 21 YAIAIILMTLLVSLMIIPMTISQQKQAERTKVFKPKMEEIQKKYGYD-QQIMQQKMQQLY 79 Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISIS--------LEMRHAPFWGWIKDLAAADP 470 K + P ++GC +++QI V F +++++S + L+ F+ WI L DP Sbjct: 80 KEEGVTPGISGCLVMIIQILVLFGLFRMMSDTTKYVFPEGLDNVKTNFY-WIPTLLDKDP 138 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF----IQMKMSPPPADKGQAMILN----W 522 FG+ P++ SLS F MK +P G +N Sbjct: 139 ----YWFGL--------------PLLTSLSQFAVQLFSMKTNPQMQQGGAMGGMNNMFLL 180 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP+++ F PAGL +Y++ S++ +V +++ MH A Sbjct: 181 MPLMYFFVFRGLPAGLPLYYTLSSLFRLV---IMVIMHFA 217 >gi|315038841|ref|YP_004032409.1| hypothetical protein LA2_08525 [Lactobacillus amylovorus GRL 1112] gi|312276974|gb|ADQ59614.1| hypothetical protein LA2_08525 [Lactobacillus amylovorus GRL 1112] Length = 322 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/250 (22%), Positives = 112/250 (44%), Gaps = 41/250 (16%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +GW Y ++ +P+ +M +++G G I++ T V+L+ PL K Sbjct: 39 YGWVYQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ---SPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K +P Q L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQTAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGMGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + + T+F ++ Y+ +GI Sbjct: 159 WGIYQAVFYSPQLAHSTFFGISLSQKSVVLAIVATVFTVIQGYIS---LIGI-------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI---- 556 P K ++ P++ +F SF L +YW+ N+++I+QQ ++ Sbjct: 208 --------PEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVTIIQQLIVTFVL 259 Query: 557 ---MKMHGAE 563 +K H AE Sbjct: 260 TPKVKQHVAE 269 >gi|332143490|ref|YP_004429228.1| putative inner membrane protein translocase component YidC [Alteromonas macleodii str. 'Deep ecotype'] gi|327553512|gb|AEB00231.1| putative inner membrane protein translocase component YidC [Alteromonas macleodii str. 'Deep ecotype'] Length = 103 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 20/108 (18%) Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+E+RHA F WI DL+ DP + PI+ SM++ K+ P Sbjct: 3 SVELRHADFVLWITDLSTKDPYFVL-------------------PILTGASMYLLQKLQP 43 Query: 510 PP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 D Q I+ WMPV FPAGL++YW SNVI++VQ +I Sbjct: 44 TTITDPMQQKIMQWMPVAMSVFFLWFPAGLVLYWLVSNVITLVQAKMI 91 >gi|332686710|ref|YP_004456484.1| inner membrane protein translocase component YidC [Melissococcus plutonius ATCC 35311] gi|332370719|dbj|BAK21675.1| inner membrane protein translocase component YidC, OxaA protein [Melissococcus plutonius ATCC 35311] Length = 315 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 107/226 (47%), Gaps = 32/226 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQ 393 + + +PM +++Y N N+G AI++ T+ V+++ PL + K V + M+ ++ Sbjct: 39 YNLLVQPMSNMITYLVNHFNWNYGWAIIVITIVVRIIILPLGLYQSHKSLVQSEKMQALK 98 Query: 394 PKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P++D + KQ+ Q Q M ++YK +N++ + G C P+L+Q+P+F A++ Sbjct: 99 PQLDIAQSNLKQAKTQEEQLNARADMQRVYKENNVSMVGGIGCLPLLIQMPIFSALFFAA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMK 506 + + A F G ++ P+ +F + L G++ +GI Sbjct: 159 KYTKGITQANFLG----ISLGKPSLVFVALAGAAYLLQGYLSTIGI-------------- 200 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K +L P++ VF S PAG+ +YW + + +Q Sbjct: 201 --PEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQ 244 >gi|315653630|ref|ZP_07906550.1| membrane protein OxaA [Lactobacillus iners ATCC 55195] gi|315488992|gb|EFU78634.1| membrane protein OxaA [Lactobacillus iners ATCC 55195] Length = 319 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 87/170 (51%), Gaps = 17/170 (10%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 + W Y P+ +M + NL+G G AI++ T ++L+ PL K Sbjct: 38 YAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIKQQE 97 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVFFAI 443 K +QP++ ++ K++ + +Q + +Q+ YK +N++ + G C P+L+Q+P+ I Sbjct: 98 KTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIMIGI 157 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGI 492 Y+ ++ S + A F G ++ + P+ +F + + + + G++ +GI Sbjct: 158 YQAVAYSKTLASASFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI 203 >gi|312871831|ref|ZP_07731919.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 3008A-a] gi|311092773|gb|EFQ51129.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 3008A-a] Length = 319 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 87/170 (51%), Gaps = 17/170 (10%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 + W Y P+ +M + NL+G G AI++ T ++L+ PL K Sbjct: 38 YAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIKQQE 97 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVFFAI 443 K +QP++ ++ K++ + +Q + +Q+ YK +N++ + G C P+L+Q+P+ I Sbjct: 98 KTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIMIGI 157 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGI 492 Y+ ++ S + A F G ++ + P+ +F + + + + G++ +GI Sbjct: 158 YQAVAYSKTLASASFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI 203 >gi|302388594|ref|YP_003824416.1| membrane protein insertase, YidC/Oxa1 family [Clostridium saccharolyticum WM1] gi|302199222|gb|ADL06793.1| membrane protein insertase, YidC/Oxa1 family [Clostridium saccharolyticum WM1] Length = 427 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 15/120 (12%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +++DW +F L S F + N G+ I+L T+ KLL FPL KQ S+ M Sbjct: 22 VIMDW---------LFKLTSTFG--IQNIGLCIILFTLVTKLLMFPLTLKQQKSSKLMSV 70 Query: 392 IQPKIDELREKFKQSPPQ---VLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +QP+I ++ K+K Q Q +Q +Y+ + + GC +++Q+P+ FA+Y+VI Sbjct: 71 MQPEISAIQAKYKGKTDQESMRRQNVEVQAVYEKYGTSMTGGCVQLVIQMPILFALYQVI 130 >gi|323340870|ref|ZP_08081121.1| membrane protein [Lactobacillus ruminis ATCC 25644] gi|323091721|gb|EFZ34342.1| membrane protein [Lactobacillus ruminis ATCC 25644] Length = 300 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/237 (24%), Positives = 109/237 (45%), Gaps = 31/237 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANM 389 +G+ Y +A P + + NL+G + G AI+L T V+L+ P+ KQ + + Sbjct: 33 YGFVYDHMAVPTQHFLVWLSNLMGGSLGWAIILLTFVVRLILMPVMLKQSRNATIQQEKI 92 Query: 390 KNIQPKIDEL--REKFKQSPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +++P +D++ R++ Q+ + + + ++ LY+ + I+ G C P+L+Q+P+F A+ Sbjct: 93 SHLKPLMDDIAKRQQAAQTDAEKMAISQELMSLYRDNGISMTGGIGCLPLLIQMPIFAAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ + F+G + + I T+ + L G W I Sbjct: 153 YAAIQYSPELSKSYFYG----INLGHSSIILTILSFAAYALQG------W---------I 193 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 M P K M++ PV+ PAGL +Y+ V + +Q +I M Sbjct: 194 SMLGMPKEQRKQMQMMMFMSPVMITVMTFVSPAGLGLYFFVGGVFACIQTLIINAMR 250 >gi|325474004|gb|EGC77192.1| hypothetical protein HMPREF9353_01542 [Treponema denticola F0402] Length = 954 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 20/223 (8%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFK 404 + +Y YN+ GN+GIA++L ++F+ + PL + + K + I + E ++ Sbjct: 22 VFTYSYNICGNYGIALILLSLFITAITAPLYYLAERWKNKEKVVQKKMHKDIKSINENYE 81 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 L KA ++Y + +++QIP FFA Y+V+S F +IKD Sbjct: 82 GQKRFYLTKAARKIYDYKWWYTFRTSFGLIIQIPFFFAAYEVLSKYSGYNGVSFL-FIKD 140 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L P N+ + +LPF + +++++ I S + I M Sbjct: 141 LGL--PDNLVSGVNVLPFVMT----------LINIAYSIYYTKSKSWNANKELYI---MA 185 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 +F+ L + P+ L++YW+ +NV S ++ ++ K +E+ +I Sbjct: 186 GIFLVLLYNSPSALLLYWTMNNVFSFIKGIILRKAGLSEVPVI 228 >gi|258655508|ref|YP_003204664.1| hypothetical protein Namu_5412 [Nakamurella multipartita DSM 44233] gi|258558733|gb|ACV81675.1| 60 kDa inner membrane insertion protein [Nakamurella multipartita DSM 44233] Length = 385 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 2/94 (2%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I L +LF P K Q S M+ IQP++ +LREK+K Q L + M++L K Sbjct: 43 IFLIFTLRAILFKPFMK-QMESQLKMQAIQPRMKQLREKYKDDK-QRLSEEMMKLNKEAG 100 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +NPLA C P L+Q PVF ++ V+ + + P Sbjct: 101 VNPLASCLPALIQAPVFIGLFHVLRMFQPVNDGP 134 >gi|304439080|ref|ZP_07398999.1| membrane protein OxaA [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372439|gb|EFM26026.1| membrane protein OxaA [Peptoniphilus duerdenii ATCC BAA-1640] Length = 238 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 19/193 (9%) Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 ++L P+ Q + M +QP++++++ K+K P Q L QLYK N N L+GC Sbjct: 44 RVLMLPIGISQMRNQKKMAELQPELEKIQTKYKNDP-QTLAAKQRQLYKDANYNMLSGCL 102 Query: 432 PILLQIPVFFAIYKVI---------SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 P+++Q+ V Y+V L A + +IKD+ D T I + + Sbjct: 103 PMIVQMMVLIGFYRVFYEPATYVFKEPGLYDSIAKNFFYIKDIDLKDTTLILPIVAAVTT 162 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 +L W I S + + M L MPV+ +F + L++YW Sbjct: 163 FLSS------W--ITQNSTANKASQTAQSQSMMNTMTL-VMPVMIFMMGRNFASALVLYW 213 Query: 543 SWSNVISIVQQAV 555 + SN+ ++QQ + Sbjct: 214 TVSNLFQVLQQLI 226 >gi|162448266|ref|YP_001621398.1| integral membrane protein [Acholeplasma laidlawii PG-8A] gi|161986373|gb|ABX82022.1| integral membrane protein [Acholeplasma laidlawii PG-8A] Length = 491 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 20/181 (11%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 W W + I P+ LM +F +L G +FG+ I+ T+ V+ + +P+ K + M Q Sbjct: 239 WDWVFII--PISFLMQFFASLFGLNSFGLGILFATIIVRTIAWPIYAKANDMSIKMAVAQ 296 Query: 394 PKIDELREKF--KQSPPQ--VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P++ +L+ K+ K+ P +Q M+QLYK H I+ L GC+ +LQ+P+F A+++ + Sbjct: 297 PELTKLQNKYALKKDPASQQKMQMEMMQLYKKHGISVL-GCFTPILQMPIFLAMFQTV-- 353 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKM 507 R G + AA+ N LFG++ GF V + I+ ++M++ + Sbjct: 354 ---YRITVPGG----MYAANVNNHKILFGLIDLSAGGFNDVTSYVLAAIVGVTMWLLQHL 406 Query: 508 S 508 S Sbjct: 407 S 407 >gi|168060995|ref|XP_001782477.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666030|gb|EDQ52696.1| predicted protein [Physcomitrella patens subsp. patens] Length = 419 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 33/211 (15%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP--PQVL---QKAMI 416 ++I TTV ++++ P+ Q +TA + ++P+++ + K+S P+V QK M Sbjct: 187 LSIAATTVGIRVMVLPVLVWQMKATARLTLMRPELERITNTIKESGYDPKVTEVNQKRMK 246 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---WIKDLAAADPTNI 473 +L+ HN NP +Q P+F + + I E + G W DL ADP Sbjct: 247 ELFAQHNTNPFMPLMGAFVQAPLFISFFFAIRNMAERVPSFKEGGALWFTDLTTADP--- 303 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI------LNWMPVVF 527 Y I PI+ L +++ +GQ MI V+ Sbjct: 304 ---------YF-------ILPIMSGLFTLATIELGAMDGMQGQPMIGKMKMFFRGFAVLI 347 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V +SFP L YW +NV S++Q V+ + Sbjct: 348 VPLTASFPKALFCYWLTTNVCSLIQTTVLRQ 378 >gi|213692302|ref|YP_002322888.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523763|gb|ACJ52510.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 296 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/212 (22%), Positives = 100/212 (47%), Gaps = 24/212 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQSP--PQVLQKA 414 + GIAIM + +++ PL Q +T M+ +QP+I ++ K+ ++ P + +Q+ Sbjct: 4 SLGIAIMCLVLIIRICLLPLFFSQMRATQRMQVLQPQIQRIQRKYAARKDPRSKEAMQRE 63 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIY---KVISISLEMRHAPFWGWIKDLAAA-DP 470 ++ L + HN NPL C L+Q P+ +++ + + S P G + +A + Sbjct: 64 IMALQQRHNANPLGSCLLSLIQAPILCSLFYTLQSLPASAAGNAEPLSGIDRVMAGDIES 123 Query: 471 TNIFTL-----FGILPFYLPGFMHVGIWPIIMSLSMFIQM-----KMSPP-----PADKG 515 ++IF + FG + + +G+ +M L +F + +P P + Sbjct: 124 SSIFGVRIADSFGTV-VSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQFRT 182 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 Q + P ++V + + P G+++YW +N+ Sbjct: 183 QKLTAFVFPAIYVVSGGTLPFGVLLYWLTNNL 214 >gi|291541858|emb|CBL14968.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Ruminococcus bromii L2-63] Length = 335 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 82/288 (28%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WG FY L+ +FG++I++ T+ V+L FP KQ S A + K Sbjct: 16 WGAFY---------------LLKDFGLSIIVFTIIVRLCMFPFTIKQQKSMAGTARLSKK 60 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW----PILLQIPVFFAIYKVISISL 451 E++EK+K + Q Q+ + +LY+ + P GC P L+ VF+A+ ++ +L Sbjct: 61 QKEIQEKYKNN-RQKAQEEISKLYEKEGVKPTGGCLTMIVPFLVLFGVFYAVAYPLTNTL 119 Query: 452 EMRHA------------PFWG--------------WIKDLAA------------ADPTNI 473 + A P + ++KD + AD N Sbjct: 120 HIDSAKVTEALNYVNTIPGYTAASGATNATYQEIYFLKDFSCFQNIDAIQQIFSADQLNT 179 Query: 474 FTL-------FGILPFYLPGFMHVGIW-PIIM---------SLSMFIQMKM----SPPPA 512 T+ FG+ F +P G+W P+I+ L+ FI M++ +P Sbjct: 180 ITMFEKGFNTFGMNLFAIP--QDYGLWSPMILFPVICFASNVLTQFITMRINGKNNPMQQ 237 Query: 513 DKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +G ++ + MP+ + P+ + YW S+++S+VQ ++ K+ Sbjct: 238 QQGCMKVMMYAMPLFSAYIAYIVPSAVAFYWIVSSLVSLVQSVIVGKL 285 >gi|94989800|ref|YP_597900.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS10270] gi|94543308|gb|ABF33356.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10270] Length = 307 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 32/227 (14%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQP 394 F+ KPM + YF N G +G+AI++ T+ V+ L PL K Y S M ++P Sbjct: 40 FLGKPMSYFIDYFANNAGLGYGLAIIIVTIIVRTLILPLGLYQSWKASYQSE-KMTFLKP 98 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVIS 448 + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 99 VFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQ 158 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F DL + + + L F+ W LSM M +S Sbjct: 159 YTKGVSTSTFMSI--DLGSRSLV-LTAIIAALYFFQS-------W-----LSM---MAVS 200 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ + M+ MP++ +F S PAG+ +YW SI+QQ + Sbjct: 201 EEQREQMKTMMYT-MPIMMIFMSFSLPAGVGLYWLVGGFFSIIQQLI 246 >gi|262204659|ref|YP_003275867.1| membrane protein insertase, YidC/Oxa1 family [Gordonia bronchialis DSM 43247] gi|262088006|gb|ACY23974.1| membrane protein insertase, YidC/Oxa1 family [Gordonia bronchialis DSM 43247] Length = 411 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 7/98 (7%) Query: 355 NLVGNFGIAIMLTTVFV-----KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 N G G+A L+ VF+ +L+ P K Q +T M+ I P++ +R+K+ + + Sbjct: 26 NSPGGDGVAWALSVVFLVFTLRAILYKPFVK-QIRTTKKMQEINPELQAIRKKYAKDRVK 84 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + ++ M +L K H NPL GC P+LLQIPVF ++ V+ Sbjct: 85 MTEE-MQKLQKEHGFNPLLGCLPMLLQIPVFIGLFHVL 121 >gi|332654814|ref|ZP_08420556.1| inner membrane protein OxaA [Ruminococcaceae bacterium D16] gi|332516157|gb|EGJ45765.1| inner membrane protein OxaA [Ruminococcaceae bacterium D16] Length = 401 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 5/106 (4%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I KP L+ +FYN ++GIA++L + VKL+ FPL+ K S M + K+ +L++ Sbjct: 4 ILKPFAWLLLFFYNFFSSYGIALILFALVVKLILFPLSLKGKKSMIKMNLLSGKMQQLQK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGC-W---PILLQIPVFFAI 443 ++ + + Q + +LY+ +NP+ GC W P+ + IP+++ I Sbjct: 64 QYGKDRERY-QMEVQKLYEREKVNPMGGCLWSFLPLFILIPLYYII 108 >gi|33240751|ref|NP_875693.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|38502917|sp|Q7VB00|OXAA_PROMA RecName: Full=Inner membrane protein oxaA gi|33238279|gb|AAQ00346.1| Preprotein translocase subunit YidC [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 382 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 10/113 (8%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ--- 405 ++ +FY L ++GIAI+ T+ +++ FPL+ S MK QP + + + + K Sbjct: 13 ILDFFYGLFHSYGIAIVALTIVIRIALFPLSAGSIRSARRMKIAQPVMQKRQAEIKSRYA 72 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + P+ Q + +L +PLAGC P+L+Q+P+ FA++ +R +PF Sbjct: 73 NDPKKQQDELGKLMGEFG-SPLAGCLPLLVQMPILFALFAT------LRGSPF 118 >gi|315650198|ref|ZP_07903273.1| stage III sporulation protein J [Eubacterium saburreum DSM 3986] gi|315487555|gb|EFU77863.1| stage III sporulation protein J [Eubacterium saburreum DSM 3986] Length = 417 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 8/116 (6%) Query: 337 GWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 GWF A+ + +M+ +++ + N GIAI++ T+ + ++ PL KQ S M IQP+ Sbjct: 15 GWF---AEILGFIMNLIFDIGITNIGIAIIVFTIVINVIMIPLTIKQQKSQKLMTVIQPE 71 Query: 396 IDELREKFK----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 I +++K+K + +Y + + GC P+L+Q+P+ F +Y+VI Sbjct: 72 IKAIQDKYKGKTDNESAMKMNAETRAVYSKYGTSMTGGCLPLLIQMPILFGLYQVI 127 >gi|260579557|ref|ZP_05847428.1| preprotein translocase YidC subunit [Corynebacterium jeikeium ATCC 43734] gi|258602328|gb|EEW15634.1| preprotein translocase YidC subunit [Corynebacterium jeikeium ATCC 43734] Length = 324 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 1/89 (1%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 + +AIM +++L Q S+ M+ +QPK+ EL+ K+K Q L M +L Sbjct: 30 TWALAIMFLVFTIRILLVKPMANQLRSSRKMQEMQPKMQELQRKYKNDR-QTLAVEMRKL 88 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVI 447 K +NPLA C P+L+Q+P+F ++ V+ Sbjct: 89 QKEMGVNPLASCLPMLVQMPIFLGLFHVL 117 >gi|90962705|ref|YP_536621.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118] gi|90821899|gb|ABE00538.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118] Length = 279 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 29/188 (15%) Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 PL Q S +QPK+ L+EK+ Q+L K +LY INP A P Sbjct: 77 LPLMIYQMKSMRQTMELQPKLKALQEKYPGKDMESRQMLAKEQQKLYSEAGINPFASMLP 136 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +++Q+P+ FA+Y+ I S ++ F+ W++ L DP I Sbjct: 137 LIVQMPILFALYQAIFRSDVLKSGTFF-WMQ-LGDKDPYYIL------------------ 176 Query: 493 WPIIMSLSMFIQMKMS--PPPADKGQAMILNW-MPV-VFVFALSSFPAGLIIYWSWSNVI 548 PI+ ++ ++ K++ P ++ W MP+ +FVFAL + PA L +YW +N+ Sbjct: 177 -PILAAIFTWLTSKLNSMAQPEQNTITTVMTWSMPIMIFVFAL-NVPAALSLYWVITNLF 234 Query: 549 SIVQQAVI 556 S Q +I Sbjct: 235 SAGQTLLI 242 >gi|68537196|ref|YP_251901.1| putative inner membrane protein translocase component YidC [Corynebacterium jeikeium K411] gi|68264795|emb|CAI38283.1| preprotein translocase YidC subunit [Corynebacterium jeikeium K411] Length = 324 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 1/89 (1%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 + +AIM +++L Q S+ M+ +QPK+ EL+ K+K Q L M +L Sbjct: 30 TWALAIMFLVFTIRILLVKPMANQLRSSRKMQEMQPKMQELQRKYKNDR-QTLAVEMRKL 88 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVI 447 K +NPLA C P+L+Q+P+F ++ V+ Sbjct: 89 QKEMGVNPLASCLPMLVQMPIFLGLFHVL 117 >gi|301300482|ref|ZP_07206681.1| putative stage III sporulation protein J [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851929|gb|EFK79614.1| putative stage III sporulation protein J [Lactobacillus salivarius ACS-116-V-Col5a] Length = 263 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 29/188 (15%) Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 PL Q S +QPK+ L+EK+ Q+L K +LY INP A P Sbjct: 61 LPLMIYQMKSMRQTMELQPKLKALQEKYPGKDMESRQMLAKEQQKLYSEAGINPFASILP 120 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +++Q+P+ FA+Y+ I S ++ F+ W++ L DP I Sbjct: 121 LIVQMPILFALYQAIFRSDVLKSGTFF-WMQ-LGDKDPYYIL------------------ 160 Query: 493 WPIIMSLSMFIQMKMS--PPPADKGQAMILNW-MPV-VFVFALSSFPAGLIIYWSWSNVI 548 PI+ ++ ++ K++ P ++ W MP+ +FVFAL + PA L +YW +N+ Sbjct: 161 -PILAAIFTWLTSKLNSMAQPEQNTITTVMTWSMPIMIFVFAL-NVPAALSLYWVITNLF 218 Query: 549 SIVQQAVI 556 S Q +I Sbjct: 219 SAGQTLLI 226 >gi|332523130|ref|ZP_08399382.1| putative stage III sporulation protein J [Streptococcus porcinus str. Jelinkova 176] gi|332314394|gb|EGJ27379.1| putative stage III sporulation protein J [Streptococcus porcinus str. Jelinkova 176] Length = 270 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 29/201 (14%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQSPPQV-LQKAM 415 + G+ I+L T+ ++LL PL Q S+ M+++QP++ +++ K+ K S ++ L Sbjct: 52 SIGVGIILFTILIRLLLMPLFNIQIKSSQKMQDLQPELKKIQAKYPGKDSESRMALADET 111 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAAADPTNIF 474 LYK + +NP A +P+++Q+P+ A+++ ++ ++ F W +LA D Sbjct: 112 QALYKNNGVNPYASLFPLVIQMPIMIALFQALTRVPFLKTGTFLWA---ELAQHD----- 163 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQ---MKMSPPPADKGQAMILNWMPVVFVFAL 531 H+ I PI+ +L F+ ++ + ++ MPV+ F Sbjct: 164 --------------HLYILPILAALFTFLSSWLTNLAAKEKNMVMTVMTYMMPVMIFFMG 209 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 +G+++YW SN + Q Sbjct: 210 FKLASGVVLYWVISNAFQVFQ 230 >gi|255505832|ref|ZP_05348364.3| membrane protein OxaA [Bryantella formatexigens DSM 14469] gi|255265692|gb|EET58897.1| membrane protein OxaA [Bryantella formatexigens DSM 14469] Length = 427 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 4/95 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + N GI I+L TV V LL P+ K S+ M+ P+I L++K+K Q Q M Sbjct: 35 IQNIGICIILFTVIVNLLLLPMTIKTQKSSKMMQVANPEIQALQKKYKNKTDQASQMKMY 94 Query: 417 Q----LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + LY + I+ C P+L+Q P+ A+Y+VI Sbjct: 95 EEQQALYAKYGISMSGQCLPLLIQFPILLAMYQVI 129 >gi|256847493|ref|ZP_05552939.1| inner membrane insertion protein [Lactobacillus coleohominis 101-4-CHN] gi|256716157|gb|EEU31132.1| inner membrane insertion protein [Lactobacillus coleohominis 101-4-CHN] Length = 315 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 30/225 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLA----KKQYVSTANMKNIQ 393 + ++AKPM LM + +L+GN +G AI++ + V+L+ P+ KK + M IQ Sbjct: 40 YEYLAKPMQHLMEWLASLMGNNYGWAIIVIVIVVRLILLPVMMSQMKKSTLMQEKMSMIQ 99 Query: 394 PKIDELR--EKFKQSPPQVLQKAMIQ--LYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P++ E++ +K ++P + LY+ +NI+ G C P+L+Q+PVF A+Y I Sbjct: 100 PQLREIQRQQKAAKTPEEQAAATQAMMALYRDNNISMTGGIGCLPLLIQLPVFAALYAAI 159 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ HA F G + P+ + + + + G++ + P M + M M Sbjct: 160 RYSPDLYHATFLG----IPLGKPSIMLAILSFVAYLFQGWLSMIGMPKNQQAQMRMMMLM 215 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 S PV+ F + AGL +Y+ + +I+Q Sbjct: 216 S---------------PVMIFFISMTSSAGLGLYFFIGGLFAILQ 245 >gi|160932432|ref|ZP_02079822.1| hypothetical protein CLOLEP_01267 [Clostridium leptum DSM 753] gi|156868391|gb|EDO61763.1| hypothetical protein CLOLEP_01267 [Clostridium leptum DSM 753] Length = 352 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 1/106 (0%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F +I L+ +FY N+G++I+L T+ +K++ FP + KQ S A +Q K E Sbjct: 4 FSWIGNVFGYLLWFFYEFTKNYGVSIILFTIVLKIIMFPFSIKQQKSMAKNTRLQGKQKE 63 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +++K+ + Q + + M +LY+ +NP+ GC ++ + + IY Sbjct: 64 IQKKYGDN-KQKMSEEMQKLYQQEGVNPMGGCLTSIIPLIIMMGIY 108 >gi|50955953|ref|YP_063241.1| putative inner membrane protein translocase component YidC [Leifsonia xyli subsp. xyli str. CTCB07] gi|50952435|gb|AAT90136.1| preprotein translocase, YidC subunit [Leifsonia xyli subsp. xyli str. CTCB07] Length = 324 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 116/224 (51%), Gaps = 30/224 (13%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQ 417 ++I+ T+ V+ P+ +Q + M I P++ ++++K+K Q ++AM + Sbjct: 41 LSIVGLTIVVRAALIPVFFRQIKNQRRMLEIAPQLKKIQDKYKGKKDQFSREAMSRETMD 100 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK NPL+ C P+LLQ+PVFFA+++V++ + HA L A+ TLF Sbjct: 101 LYKKTGTNPLSSCLPLLLQMPVFFALFQVLN-GAQGGHAGVGPLNSGL--AEQFGSATLF 157 Query: 478 GILPFY--LPGFMH-----------VGIWPIIMSLSMFI-QMKM-----SPP----PADK 514 G+ P + G M+ I + M+ S FI Q+++ SP P K Sbjct: 158 GVAPLHQSFQGAMNANPVQTSVVIIAAIMVVFMTGSQFITQLQIVSKNTSPETKASPQFK 217 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q ++L +P VF+F+ +FP G++ YW SN ++ QQ ++++ Sbjct: 218 QQRILLYLLPFVFLFSGFAFPLGVMFYWLTSNFWTMGQQFLVIR 261 >gi|54027644|ref|YP_121886.1| putative inner membrane protein translocase component YidC [Nocardia farcinica IFM 10152] gi|54019152|dbj|BAD60522.1| putative membrane protein [Nocardia farcinica IFM 10152] Length = 359 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 1/88 (1%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + +A++ ++++ + KQ +T M+ +QP+I EL++K+K Q + M +L Sbjct: 32 WALAVVFLVFTLRIVLYKPFVKQVRTTKQMQELQPQIKELQKKYKNDR-QKMALEMQKLQ 90 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVI 447 K H NPL GC P+L Q+PVF ++ V+ Sbjct: 91 KEHGFNPLMGCLPVLAQVPVFLGLFHVL 118 >gi|227891666|ref|ZP_04009471.1| stage III sporulation protein J precursor [Lactobacillus salivarius ATCC 11741] gi|227866469|gb|EEJ73890.1| stage III sporulation protein J precursor [Lactobacillus salivarius ATCC 11741] Length = 263 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 29/188 (15%) Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 PL Q S +QPK+ L+EK+ Q+L K +LY INP A P Sbjct: 61 LPLMIYQMKSMRQTMELQPKLKALQEKYPGKDMESRQMLAKEQQKLYSEAGINPFASMLP 120 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +++Q+P+ FA+Y+ I S ++ F+ W++ L DP I Sbjct: 121 LIVQMPILFALYQAIFRSDVLKSGTFF-WMQ-LGDKDPYYIL------------------ 160 Query: 493 WPIIMSLSMFIQMKMS--PPPADKGQAMILNW-MPV-VFVFALSSFPAGLIIYWSWSNVI 548 PI+ ++ ++ K++ P ++ W MP+ +FVFAL + PA L +YW +N+ Sbjct: 161 -PILAAVFTWLTSKLNSMAQPEQNTITTVMTWSMPIMIFVFAL-NVPAALSLYWVITNLF 218 Query: 549 SIVQQAVI 556 S Q +I Sbjct: 219 SAGQTLLI 226 >gi|327184010|gb|AEA32457.1| hypothetical protein LAB52_07690 [Lactobacillus amylovorus GRL 1118] Length = 322 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/250 (22%), Positives = 111/250 (44%), Gaps = 41/250 (16%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +GW Y ++ +P+ +M +++G G I++ T V+L+ PL K Sbjct: 39 YGWVYQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ---SPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K +P Q L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQTAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGMGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + + T+F ++ Y+ +GI Sbjct: 159 WGIYQAVFYSPQLAHSTFFGISLSQKSVVLAIVATVFTVIQGYIS---LIGI-------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI---- 556 P K ++ P++ +F SF L +YW+ N++ I+QQ ++ Sbjct: 208 --------PEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIIQQLIVTFVL 259 Query: 557 ---MKMHGAE 563 +K H AE Sbjct: 260 TPKVKQHVAE 269 >gi|157149832|ref|YP_001449500.1| membrane protein oxaA 1 precursor [Streptococcus gordonii str. Challis substr. CH1] gi|157074626|gb|ABV09309.1| Membrane protein oxaA 1 precursor [Streptococcus gordonii str. Challis substr. CH1] Length = 271 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 27/210 (12%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G+ GI I+L T+ ++ + P+ + Q S+ M+ QP I L+ K+ Sbjct: 47 FLSFNGSTGIGIILFTIIIRTVLLPVFQIQMTSSRKMQEAQPHIKALQAKYPGKDMESRN 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 +L +LYK +NPLA P+ +Q+PV A+Y+ ++ +R F W+ +LA D Sbjct: 107 LLATETQKLYKELGVNPLASFIPLFVQMPVLIALYQALTRVAFLRTGHFL-WL-NLAETD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN--WMPV-V 526 P + ILP F + W L A++ AM + MP+ + Sbjct: 165 P------YYILPVLAALFTFLSTWLNNKGL------------AERNGAMTVMTYLMPLMI 206 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 F FAL +F +G+ +YW+ SN + Q V+ Sbjct: 207 FWFAL-TFSSGVALYWTVSNAYQVGQTLVL 235 >gi|325912572|ref|ZP_08174955.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners UPII 60-B] gi|325477993|gb|EGC81122.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners UPII 60-B] Length = 319 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 87/170 (51%), Gaps = 17/170 (10%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 + W Y P+ +M + NL+G G AI++ T ++L+ PL K Sbjct: 38 YAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIKQQE 97 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVFFAI 443 K +QP++ ++ K++ + +Q + +Q+ YK +N++ + G C P+L+Q+P+ I Sbjct: 98 KTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIMMGI 157 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGI 492 Y+ ++ S + + F G ++ + P+ +F + + + + G++ +GI Sbjct: 158 YQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI 203 >gi|325912104|ref|ZP_08174502.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners UPII 143-D] gi|325476054|gb|EGC79222.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners UPII 143-D] Length = 319 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 87/170 (51%), Gaps = 17/170 (10%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 + W Y P+ +M + NL+G G AI++ T ++L+ PL K Sbjct: 38 YAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIKQQE 97 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVFFAI 443 K +QP++ ++ K++ + +Q + +Q+ YK +N++ + G C P+L+Q+P+ I Sbjct: 98 KTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIMMGI 157 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGI 492 Y+ ++ S + + F G ++ + P+ +F + + + + G++ +GI Sbjct: 158 YQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI 203 >gi|313904721|ref|ZP_07838095.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium cellulosolvens 6] gi|313470514|gb|EFR65842.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium cellulosolvens 6] Length = 420 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 4/94 (4%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM-- 415 N G+ I T+ + ++ P+ KQ S+ + IQP++ ++++K++ Q Q+ M Sbjct: 37 ANTGLCIAFFTIIIYIVLTPIQIKQQKSSKVIAVIQPELQKIQKKYQGKKDQASQQKMSE 96 Query: 416 --IQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + LY + ++P C P+L+Q+P+ FA+Y+VI Sbjct: 97 ETMALYAKYGVSPTGSCLPMLIQLPIMFALYQVI 130 >gi|325957280|ref|YP_004292692.1| hypothetical protein LAC30SC_08260 [Lactobacillus acidophilus 30SC] gi|325333845|gb|ADZ07753.1| hypothetical protein LAC30SC_08260 [Lactobacillus acidophilus 30SC] Length = 322 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/250 (22%), Positives = 111/250 (44%), Gaps = 41/250 (16%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +GW Y ++ +P+ +M +++G G I++ T V+L+ PL K Sbjct: 39 YGWVYQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ---SPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K +P Q L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQTAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGMGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + + T+F ++ Y+ +GI Sbjct: 159 WGIYQAVFYSPQLAHSTFFGISLSQKSVVLAIVATVFTVIQGYIS---LIGI-------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI---- 556 P K ++ P++ +F SF L +YW+ N++ I+QQ ++ Sbjct: 208 --------PEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIIQQLIVTFVL 259 Query: 557 ---MKMHGAE 563 +K H AE Sbjct: 260 TPKVKQHVAE 269 >gi|312874173|ref|ZP_07734207.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2052A-d] gi|311090243|gb|EFQ48653.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2052A-d] Length = 319 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 87/170 (51%), Gaps = 17/170 (10%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 + W Y P+ +M + NL+G G AI++ T ++L+ PL K Sbjct: 38 YAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIKQQE 97 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVFFAI 443 K +QP++ ++ K++ + +Q + +Q+ YK +N++ + G C P+L+Q+P+ I Sbjct: 98 KTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIMMGI 157 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGI 492 Y+ ++ S + + F G ++ + P+ +F + + + + G++ +GI Sbjct: 158 YQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI 203 >gi|312875598|ref|ZP_07735599.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2053A-b] gi|311088852|gb|EFQ47295.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2053A-b] Length = 319 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 87/170 (51%), Gaps = 17/170 (10%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 + W Y P+ +M + NL+G G AI++ T ++L+ PL K Sbjct: 38 YAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIKQQE 97 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVFFAI 443 K +QP++ ++ K++ + +Q + +Q+ YK +N++ + G C P+L+Q+P+ I Sbjct: 98 KTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIMIGI 157 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGI 492 Y+ ++ S + + F G ++ + P+ +F + + + + G++ +GI Sbjct: 158 YQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI 203 >gi|90961500|ref|YP_535416.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118] gi|90820694|gb|ABD99333.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118] Length = 307 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 114/233 (48%), Gaps = 31/233 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANM 389 +G+ Y +A P L+ + ++G ++G +I++ T V+L+ P+ +KK + + Sbjct: 33 YGFIYEKLAMPTQHLLEWLSGVLGGSYGWSIIVITFIVRLIMMPIMINQSKKATIQQEKI 92 Query: 390 KNIQPKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 I+P++ +++E+ K ++P + +AM++LY+ +NI+ + G C P+L+Q+P+F A+ Sbjct: 93 AMIRPQLAKIQEQQKNAKTPEERNAASQAMMKLYQENNISMVGGIGCLPLLIQMPIFAAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ F G + + F + + + L G++ Sbjct: 153 YAAIQYSPELSKTTFMG----INLGHRSFTFVVLTFVIYALQGWLST------------- 195 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + + + Q+MI+ PV+ PAGL +Y+ + + +Q +I Sbjct: 196 -LGLPEEQKKQMQSMII-VSPVMLTGMTYISPAGLGLYFFIGGIFACIQTLII 246 >gi|259500535|ref|ZP_05743437.1| membrane protein OxaA [Lactobacillus iners DSM 13335] gi|302191225|ref|ZP_07267479.1| preprotein translocase subunit YidC [Lactobacillus iners AB-1] gi|309810155|ref|ZP_07704000.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners SPIN 2503V10-D] gi|259167919|gb|EEW52414.1| membrane protein OxaA [Lactobacillus iners DSM 13335] gi|308169427|gb|EFO71475.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners SPIN 2503V10-D] Length = 319 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 87/170 (51%), Gaps = 17/170 (10%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 + W Y P+ +M + NL+G G AI++ T ++L+ PL K Sbjct: 38 YAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIKQQE 97 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVFFAI 443 K +QP++ ++ K++ + +Q + +Q+ YK +N++ + G C P+L+Q+P+ I Sbjct: 98 KTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIMIGI 157 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGI 492 Y+ ++ S + + F G ++ + P+ +F + + + + G++ +GI Sbjct: 158 YQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI 203 >gi|139439861|ref|ZP_01773226.1| Hypothetical protein COLAER_02260 [Collinsella aerofaciens ATCC 25986] gi|133774789|gb|EBA38609.1| Hypothetical protein COLAER_02260 [Collinsella aerofaciens ATCC 25986] Length = 256 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 66/112 (58%), Gaps = 4/112 (3%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W W I +F L+ ++G++I++ V ++LL PL K STA M+ +QPK Sbjct: 2 WDW---IVNILFELLKLIQTFAVDWGLSIIILVVIIRLLLTPLMLKSTKSTARMQVLQPK 58 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + E++E++ PQ + M + Y + NP+AGC P+L+Q+P+ FA++ ++ Sbjct: 59 MLEIQERYADD-PQRQAEEMQKFYSENKFNPMAGCLPLLIQMPILFALFTLL 109 >gi|226467554|emb|CAX69653.1| preprotein translocase YidC subunit [Schistosoma japonicum] Length = 367 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 73/319 (22%), Positives = 137/319 (42%), Gaps = 57/319 (17%) Query: 253 GISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 GI+ ++F P K LS S + ILP + + L A Sbjct: 6 GITKNILKTIFTP----------KLLSVRKFSNSVYLSTSTNCILPEPPLPPSKELILNA 55 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 PT+ + P WGW+ ML + +L + AI TT+ ++ Sbjct: 56 LGEPTLSSLGLNSYWP-------WGWY------QCMLETLHVHLELPWWGAIAATTIAIR 102 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-----QVLQ--KAMIQLYKTHNIN 425 L FP+ +Q AN + P+ L+E+ ++ +V++ + M +L K +++N Sbjct: 103 LCVFPIIIRQRRHLANFTDNMPQFTILQERMTRARLSGNYIEVMRASQEMNELMKNNDLN 162 Query: 426 PLAGCWPILLQIPVFFAIYK----VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 PL + LQ+P+F +++ ++++ + + W DL A+DP + ILP Sbjct: 163 PLKSLKYMFLQVPIFLSVFTGIRGLVNLPVTSMQSGGIAWFTDLTASDP------YYILP 216 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM---PVV-FVFALSSFPAG 537 F + MS + + + P+ Q ++ M P++ FVF ++ P+ Sbjct: 217 F------------LSMSTLLLVFETGAETPSPHIQPVVRTVMRVFPIIGFVFVVN-MPSA 263 Query: 538 LIIYWSWSNVISIVQQAVI 556 L+ YW+ SN++S +Q ++ Sbjct: 264 LVWYWTVSNMLSFLQSLIL 282 >gi|329920138|ref|ZP_08276969.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners SPIN 1401G] gi|328936592|gb|EGG33036.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners SPIN 1401G] Length = 319 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 87/170 (51%), Gaps = 17/170 (10%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 + W Y P+ +M + NL+G G AI++ T ++L+ PL K Sbjct: 38 YAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIKQQE 97 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVFFAI 443 K +QP++ ++ K++ + +Q + +Q+ YK +N++ + G C P+L+Q+P+ I Sbjct: 98 KTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIMIGI 157 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGI 492 Y+ ++ S + + F G ++ + P+ +F + + + + G++ +GI Sbjct: 158 YQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI 203 >gi|309803185|ref|ZP_07697282.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 11V1-d] gi|308164693|gb|EFO66943.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 11V1-d] Length = 308 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 87/170 (51%), Gaps = 17/170 (10%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 + W Y P+ +M + NL+G G AI++ T ++L+ PL K Sbjct: 27 YAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIKQQE 86 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVFFAI 443 K +QP++ ++ K++ + +Q + +Q+ YK +N++ + G C P+L+Q+P+ I Sbjct: 87 KTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIMIGI 146 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGI 492 Y+ ++ S + + F G ++ + P+ +F + + + + G++ +GI Sbjct: 147 YQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI 192 >gi|42526944|ref|NP_972042.1| inner membrane protein [Treponema denticola ATCC 35405] gi|41817259|gb|AAS11953.1| inner membrane protein [Treponema denticola ATCC 35405] Length = 916 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 16/199 (8%) Query: 358 GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 GN GI+I+L ++ + ++ P+ + Q A K ++ KI +++ FK ++ Sbjct: 30 GNIGISIVLLSLGINIICLPMYNVAEQWQEKERAIQKKMKAKITDIKAVFKGDERYLMLS 89 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 + H + L + + +QIP F A YK++S S M + F + DL + P + Sbjct: 90 TYYRQNNYHPLYALRSMFALFIQIPFFIAAYKLLSDSPIMAKSSFL-FFTDLGS--PDKL 146 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 +L G + V I PIIM+L + + + L ++F+ L + Sbjct: 147 LSL---------GNISVNILPIIMTLINISASAVYTKGLELKDKLTLYITALIFLLLLYN 197 Query: 534 FPAGLIIYWSWSNVISIVQ 552 P+GL+ YW+ +N+ S+++ Sbjct: 198 SPSGLVFYWTLNNLFSLLK 216 >gi|309806133|ref|ZP_07700152.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 03V1-b] gi|309808392|ref|ZP_07702292.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 01V1-a] gi|308167488|gb|EFO69648.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 03V1-b] gi|308168360|gb|EFO70478.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 01V1-a] Length = 319 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 87/170 (51%), Gaps = 17/170 (10%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 + W Y P+ +M + NL+G G AI++ T ++L+ PL K Sbjct: 38 YAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIKQQE 97 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVFFAI 443 K +QP++ ++ K++ + +Q + +Q+ YK +N++ + G C P+L+Q+P+ I Sbjct: 98 KTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIMIGI 157 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGI 492 Y+ ++ S + + F G ++ + P+ +F + + + + G++ +GI Sbjct: 158 YQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI 203 >gi|312872933|ref|ZP_07732993.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2062A-h1] gi|311091455|gb|EFQ49839.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2062A-h1] Length = 319 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 87/170 (51%), Gaps = 17/170 (10%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 + W Y P+ +M + NL+G G AI++ T ++L+ PL K Sbjct: 38 YAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIKQQE 97 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQL--YKTHNINPLAG--CWPILLQIPVFFAI 443 K +QP++ ++ K++ + +Q + +Q+ YK +N++ + G C P+L+Q+P+ I Sbjct: 98 KTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIMMGI 157 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGI 492 Y+ ++ S + + F G ++ + P+ +F + + + + G++ +GI Sbjct: 158 YQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI 203 >gi|301121274|ref|XP_002908364.1| mitochondrial inner membrane protein OXA1 [Phytophthora infestans T30-4] gi|262103395|gb|EEY61447.1| mitochondrial inner membrane protein OXA1 [Phytophthora infestans T30-4] Length = 371 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 89/210 (42%), Gaps = 40/210 (19%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV------LQKAMIQ 417 I+ TTV V+ +FFP+ + A MK QP +++L+ + +P Q Q Sbjct: 95 IIATTVAVRTVFFPVTVISMRNAAKMKLFQPDMEKLKAQMDANPTQSPESTKEFQTKYKA 154 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIY-KVISISL---EMRHAPFWGWIKDLAAADPTNI 473 L K H++NP L QIPVF + + IS E H GW+ DL+ ADPT Sbjct: 155 LMKKHDVNPFKSVLTPLSQIPVFLGFFWGLQDISKYFPEYAHEGI-GWVPDLSVADPTLA 213 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK-GQAMILNWMPVVFVFALS 532 P+I S M +++ D G M N + FAL Sbjct: 214 L-------------------PVISSALMAASVELG---GDAMGGDMQRNLKFGMRCFALM 251 Query: 533 SFP------AGLIIYWSWSNVISIVQQAVI 556 P +G+ +YW SN+ ++ Q A++ Sbjct: 252 MVPLTMNFQSGIFVYWVTSNMFTLTQTALM 281 >gi|227834359|ref|YP_002836066.1| preprotein translocase YidC subunit [Corynebacterium aurimucosum ATCC 700975] gi|262183091|ref|ZP_06042512.1| putative inner membrane protein translocase component YidC [Corynebacterium aurimucosum ATCC 700975] gi|227455375|gb|ACP34128.1| preprotein translocase YidC subunit [Corynebacterium aurimucosum ATCC 700975] Length = 329 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 7/112 (6%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W W + ++ F+L S + G + IAI+L T +K + Q S+ M+ IQP+ Sbjct: 14 WFWHWLLS---FVLDSAWG---GTWIIAIVLLTWTLKAIMVKPTITQLRSSRKMQEIQPQ 67 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 I ELR K+ + Q+ M ++YK + P+AGC P+ QIP+F ++ V+ Sbjct: 68 IQELRTKYANDQTKAAQE-MQRIYKESGVRPVAGCLPMFAQIPMFIGLFHVL 118 >gi|311112576|ref|YP_003983798.1| membrane protein OxaA [Rothia dentocariosa ATCC 17931] gi|310944070|gb|ADP40364.1| membrane protein OxaA [Rothia dentocariosa ATCC 17931] Length = 342 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 52/230 (22%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 + I+ T+ ++ + PL +Q S M +Q I +L+ K+K Q+ ++AM Q Sbjct: 41 LCIICLTLVMRAVTIPLFMRQIKSMRGMNAMQGDIAKLQAKYKGKKDQLSRQAMAQEQMA 100 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPFWGWIKDLAAADPTNIFTL 476 L+K H +P + C PI+ Q P+F +Y+V+ +S AAA+ +I L Sbjct: 101 LFKKHGTSPFSSCMPIIAQTPIFLGLYQVLMGVS--------------GAAANNEDILLL 146 Query: 477 FGILP--------FYLPGF---MHVG--------IWPIIMSLSM-----FIQMKMSP--- 509 L F P F M+ G IIM L M FIQ ++S Sbjct: 147 PAELVKQFNEAYIFGSPIFSTMMNPGNGNHTATVAQAIIMILLMSGTQFFIQKQLSAKNI 206 Query: 510 ------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P + Q M++ P++F +FP G++ YW+ SN ++ QQ Sbjct: 207 SEAAKSSPMFRQQQMMMYVFPLIFAVTGVNFPIGVMYYWTVSNFWALGQQ 256 >gi|115757016|ref|XP_790253.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115961418|ref|XP_001176925.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 441 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 37/211 (17%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-----QVLQKAM-- 415 +I++ T+ V+ FPL K T + N P ++ ++ + ++ +K+M Sbjct: 168 SIVVGTLIVRACVFPLMLKNMKYTIRLNNCMPIFQKISKEMNDAKACGDQFEMTRKSMEL 227 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIY----KVISISLE-MRHAPFWGWIKDLAAADP 470 Q K +++NPL ILLQ P+F + + ++ ++ +E M+ W W DL +DP Sbjct: 228 QQFMKKNDVNPLKSFAGILLQAPIFISFFIGLRRMATLPVESMQTGGLW-WFTDLTTSDP 286 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAM--ILNWMPV 525 +Y P+I SLSMF+ M++ + Q M +L MP Sbjct: 287 -----------YY--------ALPVIASLSMFLVMELGGEAGVSNAQAQKMRNVLRVMPF 327 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V + ++S P + YW SN S+ Q ++ Sbjct: 328 VVLPFIASLPKAVFCYWLTSNFFSVFQVGLL 358 >gi|291561650|emb|CBL40449.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [butyrate-producing bacterium SS3/4] Length = 416 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 57/93 (61%), Gaps = 4/93 (4%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQVLQKAMIQ 417 N G+ I+L T+ +K L PL KQ +T M + P+I +++K+K +S + +Q+ ++ Sbjct: 35 NVGLCIILFTIVMKTLMIPLTIKQQKTTKLMSVMNPEIQAIQKKYKGKSDQESMQRQNVE 94 Query: 418 L---YKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + Y+ + + GC P+L+Q+P+ A+Y+VI Sbjct: 95 IQAVYEKYGTSMTGGCLPLLIQMPILLALYRVI 127 >gi|222152571|ref|YP_002561746.1| OxaA-like protein [Streptococcus uberis 0140J] gi|222113382|emb|CAR41025.1| membrane protein OxaA 2 precursor [Streptococcus uberis 0140J] Length = 307 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 32/227 (14%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQP 394 + KPM ++YF N VG FG+AI++ T+ V+ L PL K Y S M ++P Sbjct: 40 LLGKPMSYFINYFANNVGLGFGLAIIIVTIIVRTLILPLGLYQSWKASYQSE-KMAFLKP 98 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVIS 448 D + +K K + Q Q ++ + + IN L G C P+L+Q+P F A+Y Sbjct: 99 IFDPINQKMKNATTQEEKLAAQTELMAAQRENGINMLGGMGCLPLLIQMPFFSAMYFAAL 158 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F G DL + + GI ++ ++ M+ Sbjct: 159 HTKGISTSTFMGI--DLGSRS-----------------LVLTGIIAVLYYFQSWLSMQAV 199 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ MP++ +F S PAG+ +YW SI+QQ + Sbjct: 200 AEEQRAQMKTMMYTMPIMMIFMTLSLPAGVGLYWLVGGFFSIIQQLI 246 >gi|291004516|ref|ZP_06562489.1| putative inner membrane protein translocase component YidC [Saccharopolyspora erythraea NRRL 2338] Length = 350 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 26/154 (16%) Query: 339 FYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFV----KLLFFPLAKKQYVSTANM 389 F FI P+ ++ +++ + G + G A L+ F+ +++ A Q + M Sbjct: 2 FDFILYPVSAILWFWHKIFGFVLGPDNGFAWALSVFFLVFSLRVVLLKPAISQMRAGRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + P+I +LREK K ++ Q+ M +L H +NPL GC P LLQIPVF +++ V Sbjct: 62 QKFAPQIQKLREKHKNDRQRMAQE-MQKLQSEHGVNPLGGCLPALLQIPVFLSLFTV--- 117 Query: 450 SLEMRHAPFWGWIKDLAAADPTN-IFTLFGILPF 482 ++D P+N IF G+ F Sbjct: 118 ------------LRDFKPGAPSNYIFDADGVRSF 139 >gi|325473998|gb|EGC77186.1| hypothetical protein HMPREF9353_01536 [Treponema denticola F0402] Length = 894 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 96/199 (48%), Gaps = 16/199 (8%) Query: 359 NFGIAIMLTTVFVKLLFFPL--AKKQYVSTANM--KNIQPKIDELREKFKQSPPQVLQKA 414 N G AI++ ++FV ++ P+ A +++ + + K ++ KI +++ FK ++ A Sbjct: 31 NVGGAIVIVSLFVNIVTLPIYAAAEEWQNKERLLQKRLKNKIKDIKAVFKGDERYMILSA 90 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 + H + L G + +L QIP F A Y +S L + + ++ +L D Sbjct: 91 YYRQNNYHPLYSLRGMFGLLFQIPFFIAAYHFLS-ELALLQGSGFLFLDNLGKPD----- 144 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 L IL + + PI+M+L + + + + + L M ++F+F L + Sbjct: 145 ALLNILSY------KINFLPILMTLVNLLSVMIYTKNFSIKEKIQLYIMAIIFLFLLYNS 198 Query: 535 PAGLIIYWSWSNVISIVQQ 553 P+GL+ YW+ +N+ S+ + Sbjct: 199 PSGLVFYWTLNNIFSLFKN 217 >gi|302768040|ref|XP_002967440.1| hypothetical protein SELMODRAFT_408456 [Selaginella moellendorffii] gi|300165431|gb|EFJ32039.1| hypothetical protein SELMODRAFT_408456 [Selaginella moellendorffii] Length = 411 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 21/203 (10%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS--PPQVL---QKAMI 416 ++I LTTV V+ + PL Q STA ++P +++++ +Q+ P L ++ M Sbjct: 164 LSIALTTVAVRTMVLPLVIYQVKSTARFALLRPDLEKIKVDMEQANYDPVALAENKRKMA 223 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---WIKDLAAADPTNI 473 +L+ H +P LLQ P+F + + E + G W DL D Sbjct: 224 ELFAKHKTDPFTPLIGALLQGPIFMCFFFGLRTMAEKMDSFKEGGAFWFTDLTTPD---- 279 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 LF ILPF + ++++ + M P K IL M V+F+ + Sbjct: 280 -ELF-ILPF-------ITTATFLITVELNAVDGMQGQPNQKTMKNILRGMGVLFLPLTAQ 330 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 FP L YW SN+ S++Q A++ Sbjct: 331 FPKALFCYWVTSNLWSMLQGALL 353 >gi|227890587|ref|ZP_04008392.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus salivarius ATCC 11741] gi|227867525|gb|EEJ74946.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus salivarius ATCC 11741] gi|300214345|gb|ADJ78761.1| 60 kDa inner membrane protein [Lactobacillus salivarius CECT 5713] Length = 307 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 114/233 (48%), Gaps = 31/233 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANM 389 +G+ Y +A P L+ + ++G ++G +I++ T V+L+ P+ +KK + + Sbjct: 33 YGFIYEKLAIPTQHLLEWLSGVLGGSYGWSIIVITFIVRLIMMPIMINQSKKATIQQEKI 92 Query: 390 KNIQPKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 I+P++ +++E+ K ++P + +AM++LY+ +NI+ + G C P+L+Q+P+F A+ Sbjct: 93 AMIRPQLAKIQEQQKNAKTPEERNAASQAMMKLYQENNISMVGGIGCLPLLIQMPIFAAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ F G + + F + + + L G++ Sbjct: 153 YAAIQYSPELSKTTFMG----INLGHRSFTFVVLTFVIYALQGWLST------------- 195 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + + + Q+MI+ PV+ PAGL +Y+ + + +Q +I Sbjct: 196 -LGLPEEQKKQMQSMII-VSPVMLTGMTYISPAGLGLYFFIGGIFACIQTLII 246 >gi|239622135|ref|ZP_04665166.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515326|gb|EEQ55193.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 338 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 50/216 (23%), Positives = 105/216 (48%), Gaps = 24/216 (11%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQSP--PQVLQKAM 415 +GIAIM + +++ PL Q + ++ +QP+I ++ K+ ++ P + +Q+ + Sbjct: 42 WGIAIMCLVLVIRICLLPLFLSQMRAMQRIQVLQPQIQRIQHKYAARKDPRSKEAMQREI 101 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRHAPFWGWIKDLAAAD--PT 471 + L + +N NPL C P L+Q P+ +++ + ++ +A G I A D + Sbjct: 102 MALQQRYNANPLGSCLPSLIQAPILCSLFYTLQSLPAIADGNAEPLGGIDHTMAGDIESS 161 Query: 472 NIFTL-----FGILPFYLPGFMHVGIWPIIMSLSMF------IQMKMSP----PPADKGQ 516 +IF + FG + + +G+ +M L++F I S P + Q Sbjct: 162 SIFGVRIADSFGTVASPQSRII-IGVAVALMCLTLFAIQWMLIHRNTSKDAMVSPQFRVQ 220 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M + P ++V + ++ P G+++YW +N+ ++ Q Sbjct: 221 KMTVFVFPAIYVVSGATLPFGVLLYWLTNNLWNLGQ 256 >gi|167516128|ref|XP_001742405.1| hypothetical protein [Monosiga brevicollis MX1] gi|163779029|gb|EDQ92643.1| predicted protein [Monosiga brevicollis MX1] Length = 235 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/215 (21%), Positives = 92/215 (42%), Gaps = 34/215 (15%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ--- 417 + I TT+ ++ L PL + + NIQP++ ++ ++ + Q Sbjct: 28 AVGICATTILMRTLMLPLVFGSMRNNTILMNIQPQLQLHSQRIRECQTRNDHDGAAQAAA 87 Query: 418 ----LYKTHNINPLAGCWPILLQIPV----FFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L+K H ++PL G P+ +Q PV F A+ ++ ++ +E W DL AAD Sbjct: 88 NLNGLFKEHGVHPLKGLLPLFVQAPVFISFFMALRQMANLPIESMKTGGLLWFTDLTAAD 147 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN---WMPVV 526 P+Y + P+I S +M ++ + M+ N + +V Sbjct: 148 -----------PYY--------VLPVIASATMLATIEFGSEGVKQNNVMMKNVFRGLSIV 188 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + + P + +YW +N+ S+ Q +++K+ G Sbjct: 189 LLPVTINLPTAIFVYWCTANMFSL-SQMLMLKIPG 222 >gi|242042503|ref|XP_002468646.1| hypothetical protein SORBIDRAFT_01g049540 [Sorghum bicolor] gi|241922500|gb|EER95644.1| hypothetical protein SORBIDRAFT_01g049540 [Sorghum bicolor] Length = 449 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 34/207 (16%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLY 419 I LTTV ++L+ PL Q ST + ++P+I+ + E+ + S +V ++ + +L+ Sbjct: 170 IALTTVMIRLVTVPLLINQMKSTMKLNEMRPEIEAINEEMRNSTDPRSMEVGKQKLGELF 229 Query: 420 KTHNINPLAGCWPILLQIPV----FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 H + PL + +Q P+ FFAI ++ M+ + W DL D N+F Sbjct: 230 LRHGVTPLTPLKGLFIQGPIFMSFFFAISNMVEKVPSMKGGGMY-WFTDLTTPD--NLF- 285 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMF------IQMKMSPPPADKGQAMILNWMPVVFVF 529 I P++ SL+ +Q M P K + + V+FV Sbjct: 286 ----------------ILPVLTSLTFLATVELNMQDGMEGNPMAKTMKKVSRFFGVMFVP 329 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 FP + YW SN+ S+V AV+ Sbjct: 330 FTIGFPKAIFFYWVTSNLFSLVYGAVL 356 >gi|255324011|ref|ZP_05365136.1| preprotein translocase YidC subunit [Corynebacterium tuberculostearicum SK141] gi|255298868|gb|EET78160.1| preprotein translocase YidC subunit [Corynebacterium tuberculostearicum SK141] Length = 325 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+L T +K L Q S+ M+ IQPK+ E+R K+ + Q+ M ++YK Sbjct: 34 LAIVLLTWTLKALMVKPTISQIRSSRKMQEIQPKVQEIRAKYGNDQTKAAQE-MQKVYKE 92 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 + P+AGC P+ +QIP+F ++ V+ Sbjct: 93 SGVRPMAGCLPVFVQIPMFVGLFHVL 118 >gi|269926527|ref|YP_003323150.1| 60 kDa inner membrane insertion protein [Thermobaculum terrenum ATCC BAA-798] gi|269790187|gb|ACZ42328.1| 60 kDa inner membrane insertion protein [Thermobaculum terrenum ATCC BAA-798] Length = 342 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 29/209 (13%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 +F L G+ +AI+L T+ +KL+ PL+ ++ + I P I ++ +K + + Sbjct: 19 FFQGLTGSTALAIILFTILIKLILLPLSLPSLRNSRKQQQIAPLIKQIYKKHGKDRAAIS 78 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + M LY+ + INP++GC P+L+Q P+F A+++ I + WI +LA D Sbjct: 79 AETMA-LYQQYGINPMSGCLPLLIQFPIFLALWRAIIHLSTGSNVGGLLWIDNLARPD-- 135 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-------KGQAMILNWMP 524 +LPF + +L+ ++Q +M+ P D + ++ MP Sbjct: 136 ------HVLPF-------------LAALAQWLQTRMAMQPKDQIIDPQQRSMNSMMQIMP 176 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++ +F + AG ++YW S++ S VQQ Sbjct: 177 LMVIFIGWNIAAGAVLYWFVSSLFSAVQQ 205 >gi|314935960|ref|ZP_07843310.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80] gi|313655966|gb|EFS19708.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80] Length = 289 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 44/237 (18%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 G+FY +PM ++ + + V ++GIAI++ + ++++ P K ++ M Sbjct: 30 GFFYNTFVEPMAKILHWLGHSVFHDDYGIAIIVLVLVIRIILLPFMLSNYKNSHMMREKM 89 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P+++ ++EK K++ Q + A M+++YK ++INP+ GC P+L+Q+P+ Sbjct: 90 KIAKPEVEGVQEKVKRARTQEEKMAANQEMMEVYKKYDINPMKSALGCLPVLIQMPIVMG 149 Query: 443 IYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-PIIMSL 499 +Y V+ I + P + W F L +H IW II + Sbjct: 150 LYFVLRYRIGGGITEHPHFLW------------FNL-----------VHPDIWITIIAGV 186 Query: 500 SMFIQM----KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 FIQ K P + M++ P++ ++ S + L +YWS S I+Q Sbjct: 187 LYFIQAWVSSKQMPEEQRQMTYMMMIVSPIMIIWISLSSASALGLYWSVSAAFLIIQ 243 >gi|301300964|ref|ZP_07207129.1| sodium pump decarboxylase, gamma subunit [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851431|gb|EFK79150.1| sodium pump decarboxylase, gamma subunit [Lactobacillus salivarius ACS-116-V-Col5a] Length = 260 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 50/211 (23%), Positives = 103/211 (48%), Gaps = 29/211 (13%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFK--QSPPQ 409 L G++G +I++ T V+L+ P+ +KK + + I+P++ +++E+ K ++P + Sbjct: 8 LGGSYGWSIIVITFIVRLIMMPIMINQSKKATIQQEKIAMIRPQLAKIQEQQKNAKTPEE 67 Query: 410 --VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 +AM++LY+ +NI+ + G C P+L+Q+P+F A+Y I S E+ F G + Sbjct: 68 RNAASQAMMKLYQENNISMVGGIGCLPLLIQMPIFAALYAAIQYSPELSKTTFMG----I 123 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 + F + + + L G++ + + + Q+MI+ PV Sbjct: 124 NLGHRSFTFVVLTFVIYALQGWLST--------------LGLPEEQKKQMQSMII-VSPV 168 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + PAGL +Y+ + + +Q +I Sbjct: 169 MLTGMTYISPAGLGLYFFIGGIFACIQTLII 199 >gi|184155770|ref|YP_001844110.1| hypothetical protein LAF_1294 [Lactobacillus fermentum IFO 3956] gi|260663514|ref|ZP_05864404.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN] gi|183227114|dbj|BAG27630.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] gi|260552055|gb|EEX25108.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN] Length = 303 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 31/229 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FG----IAIMLTTVFVKLLFFPLAKKQYVSTANM 389 +G Y ++AKPM LM +F L GN +G +++ + + L KK + M Sbjct: 32 YGMVYDYLAKPMQHLMEWFAGLFGNSYGWAIVALVVVVRLILLPLMMSQMKKSTMMQERM 91 Query: 390 KNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +QP++ L+E+ KQ+ Q +AM+ YK +N++ G C P+L+Q+PVF A+ Sbjct: 92 AMLQPQMRALQERQKQAKTPEEQAAASQAMMSFYKDNNVSLTGGIGCLPLLIQLPVFSAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S ++ A F+G L + + + + + + G ++ Sbjct: 152 YFAIRYSPDLAQASFFG----LQLGQRSALLAIMAFVAYLIQG---------------WL 192 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M P K M L P++ +F AGL +Y+ V +I+Q Sbjct: 193 SMLGVPEDQKKQMRMALMMSPIMILFISWQASAGLGLYFFIGGVFAILQ 241 >gi|311741703|ref|ZP_07715525.1| preprotein translocase YidC subunit [Corynebacterium pseudogenitalium ATCC 33035] gi|311303224|gb|EFQ79305.1| preprotein translocase YidC subunit [Corynebacterium pseudogenitalium ATCC 33035] Length = 325 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+L T +K L Q S+ M+ IQPK+ E+R K+ + Q+ M ++YK Sbjct: 34 LAIVLLTWTLKALMVKPTISQIRSSRKMQEIQPKVQEIRAKYGNDQTKAAQE-MQKVYKE 92 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 + P+AGC P+ +QIP+F ++ V+ Sbjct: 93 SGVRPMAGCLPVFVQIPMFVGLFHVL 118 >gi|319946179|ref|ZP_08020419.1| ParB/SpoJ family partitioning protein [Streptococcus australis ATCC 700641] gi|319747561|gb|EFV99814.1| ParB/SpoJ family partitioning protein [Streptococcus australis ATCC 700641] Length = 271 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 29/194 (14%) Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ------KAMIQLY 419 L T+ ++ + P+ + Q S+ M+ IQP + E++ K+ P + L+ + M LY Sbjct: 60 LFTLLIRTILLPVFQYQMTSSRKMQEIQPLVKEIQAKY---PGKDLESRTRMSEEMRALY 116 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K + + P+ +Q+PV A+++ +S +E + W+ D++A DPT I Sbjct: 117 KEKGVKTSSAFLPLFIQMPVLMALFQALS-RVEFLKVGHFLWL-DMSATDPTF------I 168 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFVFALSSFPAGL 538 LP F W LS + P + G ++ MPV +F FA+ S +G+ Sbjct: 169 LPVLAAVFTFFSTW-----LS-----NKAMPEKNGGMTAMMYAMPVMIFFFAMYS-ASGV 217 Query: 539 IIYWSWSNVISIVQ 552 +YW SN + Q Sbjct: 218 ALYWVVSNAYQVGQ 231 >gi|229488335|ref|ZP_04382201.1| putative membrane protein [Rhodococcus erythropolis SK121] gi|229323839|gb|EEN89594.1| putative membrane protein [Rhodococcus erythropolis SK121] Length = 317 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 10/125 (8%) Query: 361 GIAIMLTTVFV-----KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 G+ L+ VF+ LLF P K Q + M+ +QP+I L++K+ Q L M Sbjct: 30 GVVWALSVVFLVFTLKALLFKPFVK-QVRTQLVMQKLQPQIKALQKKYSGDR-QKLTVEM 87 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---SISLEMRHAPFWGWIKDLAAADPTN 472 +L K HN +PL GC P+L+Q PVF +Y V+ + + H PF + ++ AD N Sbjct: 88 AKLQKEHNYSPLLGCLPMLVQAPVFIGLYHVLRSFNRTGAASHVPFLSPTEPMSVADNAN 147 Query: 473 IFTLF 477 F Sbjct: 148 TANYF 152 >gi|226308231|ref|YP_002768191.1| OxaA family protein [Rhodococcus erythropolis PR4] gi|226187348|dbj|BAH35452.1| putative OxaA family protein [Rhodococcus erythropolis PR4] Length = 318 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 10/125 (8%) Query: 361 GIAIMLTTVFV-----KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 G+ L+ VF+ LLF P K Q + M+ +QP+I L++K+ Q L M Sbjct: 30 GVVWALSVVFLVFTLKALLFKPFVK-QVRTQLVMQKLQPQIKALQKKYSGDR-QKLTVEM 87 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---SISLEMRHAPFWGWIKDLAAADPTN 472 +L K HN +PL GC P+L+Q PVF +Y V+ + + H PF + ++ AD N Sbjct: 88 AKLQKEHNYSPLLGCLPMLVQAPVFIGLYHVLRSFNRTGAASHVPFLSPTEPMSVADNAN 147 Query: 473 IFTLF 477 F Sbjct: 148 TANYF 152 >gi|319946450|ref|ZP_08020687.1| SpoIIIJ family protein [Streptococcus australis ATCC 700641] gi|319747418|gb|EFV99674.1| SpoIIIJ family protein [Streptococcus australis ATCC 700641] Length = 312 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 39/253 (15%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQP 394 I KPM +++F +G FG+ I+L TV V+++ FPL K Y S M ++P Sbjct: 40 LIGKPMGEAINFFATDLGLGFGLGIILVTVIVRVIIFPLGIYQSWKATYQSE-KMNYLKP 98 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVIS 448 ++E+ K + Q + ++ K + ++P GC P+L+Q+P F A+Y Sbjct: 99 IFAPIQERIKNAETQEEKLLANSELMNAQKENGVSPFGGIGCLPLLIQMPFFSALYFAAQ 158 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV-GIWPIIMSLSMFIQMKM 507 + + F G + + TL + +Y+ + + GI +M + Sbjct: 159 YTPGISKDSFLG----IGLGSKSLALTLVVAVLYYIQSMLSLHGIEDENQRETMKKTALV 214 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 SP ++ VF+L + PAG+ +YW + I+QQ VI + + Sbjct: 215 SP--------------IMIAVFSLMA-PAGVTLYWVVGGFVQIIQQFVINYL------IR 253 Query: 568 DRLRSTFSKNYNS 580 RLR ++ Y + Sbjct: 254 PRLRKQVAEEYKN 266 >gi|254818675|ref|ZP_05223676.1| putative inner membrane protein translocase component YidC [Mycobacterium intracellulare ATCC 13950] Length = 362 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 57/267 (21%), Positives = 106/267 (39%), Gaps = 51/267 (19%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I W W+ A M ++F + +++M ++ L + +Q +T M+ +Q Sbjct: 18 IMWVWYKLFAS-MLGPSNFF-----AWALSVMFLVFSLRALLYKPFVRQIRTTRQMQELQ 71 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----- 448 P+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF +Y V+ Sbjct: 72 PQIKALQKKYGKDR-QRMALEMQKLQREHGFNPILGCLPMLAQIPVFIGLYHVLRSFNRT 130 Query: 449 ------------------------------ISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 + + AP ++ D +F+ Sbjct: 131 TGGFGQPHLSVAENRLTGNYVFTPTDVAHFLDANLFGAPIGAFMTQRTGLDAFTVFSRPA 190 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS----- 533 ++ LP + G+ S + + SP A Q ++N + ++VF L Sbjct: 191 VIAVGLPVMILAGVATYFNSRASVA--RQSPEAAANPQTAMMNKL-ALYVFPLGVVVGGP 247 Query: 534 -FPAGLIIYWSWSNVISIVQQAVIMKM 559 P +I+YW +N+ + QQ + M Sbjct: 248 FLPLAIILYWFANNIWTFGQQHYVFGM 274 >gi|227506191|ref|ZP_03936240.1| inner membrane protein translocase component YidC [Corynebacterium striatum ATCC 6940] gi|227197215|gb|EEI77263.1| inner membrane protein translocase component YidC [Corynebacterium striatum ATCC 6940] Length = 330 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 ++I+L T +K + Q S+ M+ IQP+I ELR K+ + Q+ M ++YK Sbjct: 34 LSIVLLTWTLKAVMVKPTITQLRSSRKMQEIQPQIQELRTKYANDQTKAAQE-MQRIYKE 92 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 + P+AGC P+L QIP+F ++ V+ Sbjct: 93 SGVRPMAGCLPVLAQIPMFIGLFHVL 118 >gi|219856430|ref|YP_002473552.1| hypothetical protein CKR_3087 [Clostridium kluyveri NBRC 12016] gi|219570154|dbj|BAH08138.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 220 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 61/98 (62%), Gaps = 2/98 (2%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ Y +++ G++GI+I+L T+ V+ + P++ KQ S + + + K++ELR K+K + Sbjct: 18 VLGYLFSITGDYGISIILLTLIVRTILLPMSLKQRKSIHHQQVLSKKMEELRIKYKHNKD 77 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 + LQ+ M + YK N + GC LLQ+PV +++ V Sbjct: 78 K-LQREMEKYYK-QNTKNMFGCLVTLLQLPVISSLFIV 113 >gi|169632026|ref|YP_001705675.1| putative inner membrane protein translocase component YidC [Mycobacterium abscessus ATCC 19977] gi|169243993|emb|CAM65021.1| Membrane protein OxaA [Mycobacterium abscessus] Length = 361 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 10/124 (8%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVG------NF---GIAIMLTTVFVKLLFFPLAKKQY 383 + DW FI P+ +M +Y L NF +++M ++ + + +Q Sbjct: 1 MFDWFNLGFIYYPVSGIMWVWYKLFAYLLGPKNFFAWALSVMFLVFTLRAILYKPFVRQI 60 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +T M+ +QP+I L++K+K Q + M +L + H NP+ GC P+L QIPVF + Sbjct: 61 RTTRQMQELQPQIKALQKKYKNDR-QRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGL 119 Query: 444 YKVI 447 + V+ Sbjct: 120 FHVL 123 >gi|153956096|ref|YP_001396861.1| hypothetical protein CKL_3499 [Clostridium kluyveri DSM 555] gi|146348954|gb|EDK35490.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] Length = 213 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 61/98 (62%), Gaps = 2/98 (2%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ Y +++ G++GI+I+L T+ V+ + P++ KQ S + + + K++ELR K+K + Sbjct: 11 VLGYLFSITGDYGISIILLTLIVRTILLPMSLKQRKSIHHQQVLSKKMEELRIKYKHNKD 70 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 + LQ+ M + YK N + GC LLQ+PV +++ V Sbjct: 71 K-LQREMEKYYK-QNTKNMFGCLVTLLQLPVISSLFIV 106 >gi|239637384|ref|ZP_04678366.1| putative membrane protein [Staphylococcus warneri L37603] gi|239596984|gb|EEQ79499.1| putative membrane protein [Staphylococcus warneri L37603] Length = 289 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 109/232 (46%), Gaps = 34/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 G+FY PM L+ + N L ++G+AI++ ++L+ P K ++ M Sbjct: 30 GFFYNTFVDPMKHLLQWLGNDVLHNDYGLAIIILVFVIRLVLLPFMLSNYKNSHMMREKM 89 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P++D ++EK K++ Q + A ++++YK +++NP+ GC P+L+Q+P+ Sbjct: 90 KVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W +L D I + G+L F + Sbjct: 150 LYFVLKDKLVNGLSVHPHFLWF-NLTKPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ K P + M++ P++ ++ S + L +YWS S +VQ Sbjct: 192 AYVSSKTMPQEQRQMGYMMMIVSPIMIIWIALSSASALGLYWSVSAAFLVVQ 243 >gi|331700391|ref|YP_004336630.1| membrane protein [Pseudonocardia dioxanivorans CB1190] gi|326955080|gb|AEA28777.1| membrane protein insertase, YidC/Oxa1 family [Pseudonocardia dioxanivorans CB1190] Length = 365 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 32/233 (13%) Query: 361 GIAIMLTTVFV-----KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 G+A L VF+ +L+ P Q S M+ QP+I +LR+K+ ++ Q+ M Sbjct: 29 GVAWALAVVFLVFTLRAILYKPFVG-QVRSMRKMQEFQPEIQKLRKKYANDKQKMTQE-M 86 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--------------------ISLEMRH 455 +L +NP+ GC P+L+Q+PVF ++ V+ + ++ Sbjct: 87 QRLQSEQGVNPVGGCLPVLIQVPVFIGLFHVLREFKPGKTENYIFNAEDVRSFVDADLFG 146 Query: 456 APFWGWIKDLAAADPTNIF--TLFGILPFYLPGFMHVGIWPIIM---SLSMFIQMKMSPP 510 A I L A T+ +L +P + G++ I S++ +++ + P Sbjct: 147 AKLGASIVPLQGAPSLESLGTTVGQMLVVMIPLMIMAGVFTHITARHSVARQTEVQAANP 206 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + ++L P+ V P ++ YW +N+ ++ QQ ++ K AE Sbjct: 207 QSAIMNKLMLYVFPIGVVVGAPFLPLAILFYWVSNNLWTLAQQRIVYKKIDAE 259 >gi|315503883|ref|YP_004082770.1| membrane protein insertase, yidc/oxa1 family [Micromonospora sp. L5] gi|315410502|gb|ADU08619.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora sp. L5] Length = 248 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L TV V+LL PL Q + P++ EL+ ++ P + LQ + LY+ Sbjct: 38 IVLFTVAVRLLISPLTVAQVRGERRRTALAPEVRELQRRYADDPAR-LQSELFALYRNAG 96 Query: 424 INPLAGCWPILLQIPVFFAIYKVIS 448 +P+AGC P LLQ P F +Y++ + Sbjct: 97 ASPVAGCLPALLQAPFFLVMYRLFA 121 >gi|298345820|ref|YP_003718507.1| hypothetical protein HMPREF0573_10694 [Mobiluncus curtisii ATCC 43063] gi|304390476|ref|ZP_07372429.1| preprotein translocase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298235881|gb|ADI67013.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063] gi|304326232|gb|EFL93477.1| preprotein translocase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 441 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 62/246 (25%), Positives = 104/246 (42%), Gaps = 30/246 (12%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW M L+ + +AI+ T+ V+L+ PL KQ ++ M QP++ Sbjct: 29 GWVLRGVHEMITLLGVESGAGIGWVLAIVGMTIVVRLIIVPLFIKQIKASRAMSLAQPEL 88 Query: 397 DELREKFKQSPPQVL----QKAMIQLYKTHNINPLAGCWPILLQIPVFFAI------YKV 446 + +K+K Q Q+ M + K + + A C P+L+Q+PV A+ Sbjct: 89 TAITKKYKGKRDQQTMMRQQEEMKAVQKKYGASMSASCLPLLVQMPVLLALYRLLYYMSA 148 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIF-------TLFGILPFYLPGFMHVGIWPIIMSL 499 ++ H G + A A + F T+FG L + +GI + + Sbjct: 149 VAHGTMPEHVSIGGMGQQQAKALWDSTFFGESLGQTMFGPTS-TLQTKIVIGIMVAFLVI 207 Query: 500 SMFIQMKM------------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 +MF+Q S P K ++ +MP+V++F GL+IYW+ SN Sbjct: 208 TMFVQTAFLSMKNMSDEQLNSDNPMVKSTKSMMYFMPLVYLFTGPVVQVGLLIYWATSNT 267 Query: 548 ISIVQQ 553 S+VQQ Sbjct: 268 WSLVQQ 273 >gi|317488566|ref|ZP_07947111.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp. 1_3_56FAA] gi|316912308|gb|EFV33872.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp. 1_3_56FAA] Length = 663 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 33/225 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F +I +P Y+L G++ +AI+L TV +K++ PL+ ++ M I P+++ Sbjct: 9 FSYIVQPC-------YDLTGSWWMAILLFTVIIKIVLMPLSLWCQWNSIVMVKIMPELNR 61 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++ K+ + +K + L K H+ +PL P+ QI V F + +VI H Sbjct: 62 IKVKYFGDAETIGEKQTL-LNKKHHYHPLLSLIPLAAQILVLFGLVEVI-------HG-- 111 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPAD- 513 I D A P F G++P G I P++ LS F Q +++P + Sbjct: 112 ---ITDHGA--PGTEF--LGMVPIEDGGLS--WIMPLLAGLSAVVMGFAQNRINPLQREQ 162 Query: 514 -KGQAMILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIVQQAVI 556 K + N + +V L + AG+ YW SN+++IV QA+ Sbjct: 163 SKMEKNTTNGLSIVLSLVLGVYVAAGMAFYWICSNLMAIVVQALC 207 >gi|160946600|ref|ZP_02093803.1| hypothetical protein PEPMIC_00558 [Parvimonas micra ATCC 33270] gi|158446984|gb|EDP23979.1| hypothetical protein PEPMIC_00558 [Parvimonas micra ATCC 33270] Length = 233 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 45/199 (22%) Query: 372 KLLFFPLAKKQYVSTANMKNIQPKI----DELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 K++ FP+ ++S+ + IQ K ++REK+K Q + +++ K H I L Sbjct: 45 KVVLFPI----FLSSIKNQKIQAKFAKEQQKIREKYKHDQ-QAMNLKLMEFNKEHGIKQL 99 Query: 428 AGCWPILLQIPVFFAIYKVISISL----------EMRHAPFWGWIKDLAAADPTNIFTLF 477 GC P++ + + A++ V+ L M++ + WIKDL+A DP L+ Sbjct: 100 GGCLPMIFNLILVLAMFAVMREPLLYIFGDANANVMKN---FLWIKDLSAPDPL----LY 152 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-----PPPADKGQAMILNWMPVVFVFALS 532 G+ P+I +++ +I + +S P K + P + + Sbjct: 153 GL--------------PLINAVTQYIYLDLSNRDQKDNPGAKSMETMKYIFPFIIFISAK 198 Query: 533 SFPAGLIIYWSWSNVISIV 551 SF AGL +YW+ +N++ I+ Sbjct: 199 SFSAGLALYWAMTNIVEIL 217 >gi|238060836|ref|ZP_04605545.1| membrane protein [Micromonospora sp. ATCC 39149] gi|237882647|gb|EEP71475.1| membrane protein [Micromonospora sp. ATCC 39149] Length = 299 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ V+LL PL Q + P++ +LR + P + LQ + LY++ Sbjct: 77 IVLFTIAVRLLISPLTLAQVRGERRRAVLAPQVRDLRRRHAADPAR-LQGELFALYRSAG 135 Query: 424 INPLAGCWPILLQIPVFFAIYKVIS 448 +P+AGC P LLQ P F +Y++ S Sbjct: 136 ASPVAGCLPALLQAPFFLVMYRLFS 160 >gi|315657685|ref|ZP_07910567.1| preprotein translocase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492157|gb|EFU81766.1| preprotein translocase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 441 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 62/246 (25%), Positives = 104/246 (42%), Gaps = 30/246 (12%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW M L+ + +AI+ T+ V+L+ PL KQ ++ M QP++ Sbjct: 29 GWVLRGVHEMITLLGVESGAGIGWVLAIVGMTIVVRLIIVPLFIKQIKASRAMSLAQPEL 88 Query: 397 DELREKFKQSPPQVL----QKAMIQLYKTHNINPLAGCWPILLQIPVFFAI------YKV 446 + +K+K Q Q+ M + K + + A C P+L+Q+PV A+ Sbjct: 89 TAITKKYKGKRDQQTMMRQQEEMKAVQKKYGASMSASCLPLLVQMPVLLALYRLLYYMSA 148 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIF-------TLFGILPFYLPGFMHVGIWPIIMSL 499 ++ H G + A A + F T+FG L + +GI + + Sbjct: 149 VAHGTMPEHVSIGGMGQQQAKALWDSTFFGESLGQTMFGPTS-TLQTKIVIGIMVAFLVI 207 Query: 500 SMFIQMKM------------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 +MF+Q S P K ++ +MP+V++F GL+IYW+ SN Sbjct: 208 TMFVQTAFLSMKNMSDEQLNSDNPMVKSTKSMMYFMPLVYLFTGPVVQVGLLIYWATSNT 267 Query: 548 ISIVQQ 553 S+VQQ Sbjct: 268 WSLVQQ 273 >gi|260437685|ref|ZP_05791501.1| inner membrane protein OxaA [Butyrivibrio crossotus DSM 2876] gi|292809911|gb|EFF69116.1| inner membrane protein OxaA [Butyrivibrio crossotus DSM 2876] Length = 415 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 4/92 (4%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAM 415 GI+++L T+ V+L+ P+ KQ + + P++ E++ K+K QV +Q Sbjct: 46 IGISVILFTIIVRLILLPMTIKQQKFSKLSGLMNPELQEIQAKYKDKRDQVSMMNMQAET 105 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +Y+ + +P GC +L+Q+P+ FA+Y+VI Sbjct: 106 KAVYEKYGTSPTGGCLTMLIQLPIMFALYRVI 137 >gi|297194184|ref|ZP_06911582.1| membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|297152155|gb|EFH31560.1| membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 245 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 33/186 (17%) Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP--PQVLQKAMIQLYKTHNINPL 427 V+L PL++ + P++ ELR K+ + + LQKA ++LY ++PL Sbjct: 34 LVRLAVHPLSRAAARGQKARTRLAPQLAELRVKYGSNAKDAERLQKATMELYAREKVSPL 93 Query: 428 AGCWPILLQIPVFFAIYKVIS-----------ISLEMRHAPFWG-WIKDLAAADPTNIFT 475 +GC P LLQ+P FF +Y + S + + AP G W LA Sbjct: 94 SGCLPSLLQLPAFFLMYHLFSNAEIGGEPNGLLGHALFDAPLGGRWTDALADGG------ 147 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFI------QMKMSPPPADK--GQAMILNWMPVVF 527 +FG G ++V ++ I+ +++ F QM +P ++ G + +P++ Sbjct: 148 MFGG-----AGLVYVALFVIVAAVATFTYRRTKRQMAAAPMTGEQMPGMVAMTKVVPLLS 202 Query: 528 VFALSS 533 F L++ Sbjct: 203 FFTLAT 208 >gi|237786652|ref|YP_002907357.1| putative inner membrane protein translocase component YidC [Corynebacterium kroppenstedtii DSM 44385] gi|237759564|gb|ACR18814.1| preprotein translocase subunit [Corynebacterium kroppenstedtii DSM 44385] Length = 324 Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 10/116 (8%) Query: 341 FIAKPMFMLMSYFYNLVGNF-----GIAIMLTTVF----VKLLFFPLAKKQYVSTANMKN 391 FI P+ +M +Y G F G+ L+ +F +++ F Q S M+ Sbjct: 4 FIYYPVSWVMLAWYKFFGLFLNPDSGVTWALSIIFLVFTIRIFLFKPMANQMRSGRKMQE 63 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +QPK+ E+R K+K Q M +L K +NPLA C P L+Q+P+F ++Y V+ Sbjct: 64 LQPKMQEIRAKYKNDQ-QTQAIEMRKLQKEMGVNPLASCLPALVQMPIFISLYHVL 118 >gi|332018694|gb|EGI59266.1| Mitochondrial inner membrane protein OXA1L [Acromyrmex echinatior] Length = 442 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 109/243 (44%), Gaps = 37/243 (15%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P FE L GW + L+ + + NL + +AI++TT+ + L FPL K + Sbjct: 135 PTFESLGLGGWTP--TGIVHNLLEFMHINLDMPWWLAIVITTICARSLLFPLVIKTQKNV 192 Query: 387 ANMKNIQPKIDE--LREKFKQSPPQVLQKA-----MIQLYKTHNINPLAGCWPILLQIPV 439 + N PKI + +R ++ +Q A M++ KT+ I+ L+Q PV Sbjct: 193 IRLTNHMPKIQDFNIRLTEARNCGDHMQSAQIATEMMKYMKTNKISFTQNVMMPLVQAPV 252 Query: 440 ----FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 FFA+ K+ ++ +E + W+KDL D P+Y I PI Sbjct: 253 FISFFFALRKMANLPVESLKDGGFLWLKDLTVYD-----------PYY--------IMPI 293 Query: 496 IMSLSMFIQMKMSPPPAD----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 I S++MFI +++ + +L +P V + + FP ++ YW +N +S++ Sbjct: 294 ITSVTMFITIELGTDGTNIYAMGVMRYVLRALPFVALPFMLHFPGTILTYWVATNTVSLI 353 Query: 552 QQA 554 Q Sbjct: 354 QTG 356 >gi|330684781|gb|EGG96474.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU121] Length = 289 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 109/232 (46%), Gaps = 34/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 G+FY PM L+ + N L ++G+AI++ ++L+ P K ++ M Sbjct: 30 GFFYNTFVDPMKHLLQWLGNDVLHNDYGLAIIILVFVIRLVLLPFMLSNYKNSHMMREKM 89 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P++D ++EK K++ Q + A ++++YK +++NP+ GC P+L+Q+P+ Sbjct: 90 KVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W +L D I + G+L F + Sbjct: 150 LYFVLKDKLVSGLSVHPHFLWF-NLTKPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ K P + M++ P++ ++ S + L +YWS S +VQ Sbjct: 192 AYVSSKTMPQEQRQMGYMMMIVSPIMIIWISLSSASALGLYWSVSAAFLVVQ 243 >gi|309798989|ref|ZP_07693246.1| membrane protein OxaA 2 [Streptococcus infantis SK1302] gi|308117393|gb|EFO54812.1| membrane protein OxaA 2 [Streptococcus infantis SK1302] Length = 308 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 104/249 (41%), Gaps = 35/249 (14%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNI---- 392 I PM + YF G FG+ I++ T+ V+LL PL K + + M + Sbjct: 41 IGAPMAEAIKYFATDQGLGFGLGIIIVTIIVRLLILPLGIYQSWKATLHSEKMNALKDVL 100 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 +P L+E Q Q+A+ K H I+ G C+PIL+Q+P F AIY + Sbjct: 101 EPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILIQMPFFSAIYFAAQHT 160 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLF-GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + A + G + P+ I F GIL + G+ + + MSP Sbjct: 161 EGVAQASYLG----IPLGSPSMILVAFAGILYYLQSLLSLHGVEDETQREQIKKMLYMSP 216 Query: 510 PPADKGQAMILNWMPVVF-VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 M VVF VF+ PA + +YW + I+QQ +I M L Sbjct: 217 ------------LMIVVFSVFS----PASVTLYWVVGGFMMILQQFIINYM--VRPHLRK 258 Query: 569 RLRSTFSKN 577 ++R F+KN Sbjct: 259 KVREEFAKN 267 >gi|81429494|ref|YP_396495.1| membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei 23K] gi|78611137|emb|CAI56190.1| Membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei 23K] Length = 277 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 23/203 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ---SPPQVLQKA 414 G++G AI+ T+ ++L+ PL Q + + + P+I L++K+ Q L++ Sbjct: 59 GSYGWAIVAFTIIIRLIILPLTWWQSKTMMKQQEVAPEIQALQKKYASKDVETQQKLREE 118 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LY +NP+ GC P+L+Q+PV A+Y+ I + ++ F W++ L ADP I Sbjct: 119 TQKLYAEAGVNPVIGCLPLLVQMPVLIALYQAIYRTSALKSGSFL-WMQ-LGKADPYFIM 176 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFVFALSS 533 + + + ++ + MS P + +L MP+ +FV A+ + Sbjct: 177 AILAAVFTFATSYLTM----------------MSQPTKNATTTAMLWVMPIMIFVMAM-N 219 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 + + IYW +N S+ Q VI Sbjct: 220 IASAVSIYWVVTNAFSVGQTMVI 242 >gi|312866151|ref|ZP_07726372.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei F0415] gi|311098555|gb|EFQ56778.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei F0415] Length = 319 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 30/226 (13%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMKNIQPK 395 + KPM L++YF +G +G +++ V V+LL PL Q S A +++ P Sbjct: 39 LLGKPMSNLITYFAQNLGLGYGWGLVIVIVLVRLLILPLGLHQSRSAAYQAAKREHLAPI 98 Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 + + +K K++ Q Q ++Q + + I+ L G C P+L+Q P F A+Y Sbjct: 99 FEPINKKLKEATTQEEKMAAQTELMQANRDNGISMLGGMGCLPLLIQFPFFSAMY----- 153 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 R+ P G +K + F F + +P V I I+ + ++ + P Sbjct: 154 -WAARYTP--GILK--------SNFLWFNLGNRDIP---IVAIIAILYLIQAWLGAQQMP 199 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 K M + P++ V S P+ ++IYW + SI+QQ + Sbjct: 200 EEQRKQAGMTMYMTPIIMVIFGFSQPSAVVIYWFVGGIFSIIQQLI 245 >gi|296167146|ref|ZP_06849553.1| membrane protein OxaA [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897468|gb|EFG77067.1| membrane protein OxaA [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 369 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 10/126 (7%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG------NF---GIAIMLTTVFVKLLFFPLAKK 381 E+L D+ F+ P+ +M +Y L NF +++M ++ L + + Sbjct: 2 ELLFDFFSLDFVYYPVSWIMWAWYKLFAAMLGPSNFFAWALSVMFLVFSLRALLYKPFVR 61 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 62 QIRTTRQMQELQPQIKALQKKYGKDR-QRMALEMQKLQREHGFNPILGCLPMLAQIPVFI 120 Query: 442 AIYKVI 447 +Y V+ Sbjct: 121 GLYHVL 126 >gi|77409832|ref|ZP_00786473.1| SpoIIIJ family protein [Streptococcus agalactiae COH1] gi|77171560|gb|EAO74788.1| SpoIIIJ family protein [Streptococcus agalactiae COH1] Length = 195 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 25/173 (14%) Query: 385 STANMKNIQPKIDELREKFKQSPPQV---LQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 S+ M+ IQP++ EL++K+ P L M +YK +NP A P+L+Q+PV + Sbjct: 3 SSQKMQEIQPRLKELQKKYPGKDPDSRLKLNDEMQSMYKAEGVNPYASVLPLLIQLPVLW 62 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A+++ ++ ++ F +L+ DP + ILP F + W Sbjct: 63 ALFQALTRVXFLKVGTFLSL--ELSQPDP------YYILPVLAALFTFLSTW-------- 106 Query: 502 FIQMKMSPPPADKGQAMILNW--MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + +K A+ L MP + + +F +G+++YW+ SN + Q Sbjct: 107 ----LTNKAAVEKNIALTLMTYVMPFIILVTSFNFASGVVLYWTVSNAFQVFQ 155 >gi|300215289|gb|ADJ79705.1| 60 kDa inner membrane protein [Lactobacillus salivarius CECT 5713] Length = 279 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 29/188 (15%) Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 PL Q S +QPK+ L+ K+ Q+L K +LY INP A P Sbjct: 77 LPLMIYQMKSMRQTMELQPKLKALQGKYPGKDMESRQMLAKEQQKLYSEAGINPFASMLP 136 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +++Q+P+ FA+Y+ I S ++ F+ W++ L DP I Sbjct: 137 LIVQMPILFALYQAIFRSDVLKSGTFF-WMQ-LGDKDPYYIL------------------ 176 Query: 493 WPIIMSLSMFIQMKMS--PPPADKGQAMILNW-MPV-VFVFALSSFPAGLIIYWSWSNVI 548 PI+ ++ ++ K++ P ++ W MP+ +FVFAL + PA L +YW +N+ Sbjct: 177 -PILAAIFTWLTSKLNSMAQPEQNTITTVMTWSMPIMIFVFAL-NVPAALSLYWVITNLF 234 Query: 549 SIVQQAVI 556 S Q +I Sbjct: 235 SAGQTLLI 242 >gi|302869633|ref|YP_003838270.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora aurantiaca ATCC 27029] gi|302572492|gb|ADL48694.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora aurantiaca ATCC 27029] Length = 248 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L TV V+LL PL Q + P++ EL+ ++ P + LQ + LY+ Sbjct: 38 IVLFTVAVRLLISPLTVAQVRGERRRTALAPEVRELQRRYADDPAR-LQSELFALYRNAG 96 Query: 424 INPLAGCWPILLQIPVFFAIYKVIS 448 +P+AGC P LLQ P F +Y++ + Sbjct: 97 ASPVAGCLPALLQAPFFLVMYRLFA 121 >gi|254777659|ref|ZP_05219175.1| putative inner membrane protein translocase component YidC [Mycobacterium avium subsp. avium ATCC 25291] Length = 353 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/279 (21%), Positives = 111/279 (39%), Gaps = 54/279 (19%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG------NF---GIAIMLTTVFVKLLFFPLAKK 381 ++L D+ F+ P+ +M +Y L NF +++M ++ L + + Sbjct: 2 DLLFDFFSLDFVYYPVSWIMWVWYKLFAAMLGPSNFFAWALSVMFLVFTLRALLYKPFVR 61 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 62 QIRTTRQMQELQPQIKALQKKYGKDR-QRMALEMQKLQREHGFNPILGCLPMLAQIPVFL 120 Query: 442 AIYKVIS-----------------------------------ISLEMRHAPFWGWIKDLA 466 +Y V+ + + AP ++ Sbjct: 121 GLYHVLRSFNRTTGGFGQPHLSVVQNRLTGNYVFTPTDVGHFLDANLFGAPIGAFMTQRT 180 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 D F+ ++ LP + G+ S + + SP A Q ++N + + Sbjct: 181 GLDAFTYFSRPAVIAVGLPVMILAGVATYFNSRASVA--RQSPEAAANPQTAMMNKL-AL 237 Query: 527 FVFALSS------FPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF L P +I+YW +N+ + QQ + M Sbjct: 238 YVFPLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGM 276 >gi|306791526|ref|ZP_07429828.1| membrane protein insertase, YidC/Oxa1 family [Mycobacterium tuberculosis SUMu005] gi|308339875|gb|EFP28726.1| membrane protein insertase, YidC/Oxa1 family [Mycobacterium tuberculosis SUMu005] Length = 394 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 10/126 (7%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG------NF---GIAIMLTTVFVKLLFFPLAKK 381 +L D+ FI P+ +M +Y L NF +++M ++ L + + Sbjct: 2 SLLFDFFSLDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVR 61 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 62 QIRTTRQMQELQPQIKALQKKYGKDR-QRMALEMQKLQREHGFNPILGCLPMLAQIPVFL 120 Query: 442 AIYKVI 447 +Y V+ Sbjct: 121 GLYHVL 126 >gi|258614348|ref|ZP_05712118.1| integral membrane protein [Enterococcus faecium DO] Length = 222 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 27/176 (15%) Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQI 437 + + M+ ++P+++ ++K K + + Q A M Q+Y+ + ++ G C P+L+Q+ Sbjct: 2 IQSEKMQALKPQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQM 61 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPII 496 P+F A+Y + +R + F+G DL + P+ + + + L G++ +GI Sbjct: 62 PIFSALYFTARYTEGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGI---- 113 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P K +L P + VF S PAG+ +YW V S +Q Sbjct: 114 ------------PEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQ 157 >gi|228474911|ref|ZP_04059640.1| putative membrane protein [Staphylococcus hominis SK119] gi|228271143|gb|EEK12523.1| putative membrane protein [Staphylococcus hominis SK119] Length = 289 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 44/237 (18%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 G+FY +PM ++ + + V ++GIAI++ + ++++ P K ++ M Sbjct: 30 GFFYNTFVEPMAKILHWLGHSVFHDDYGIAIIVLVLVIRIILLPFMLSNYKNSHMMREKM 89 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P+++ ++EK K++ Q + A M+++YK ++INP+ GC P+L+Q+P+ Sbjct: 90 KIAKPEVEGVQEKVKRARTQEEKMAANQEMMEVYKKYDINPMKSALGCLPVLIQMPIVMG 149 Query: 443 IYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-PIIMSL 499 +Y V+ I + P + W F L +H IW II + Sbjct: 150 LYFVLRYRIGGGITEHPHFLW------------FNL-----------VHPDIWITIIAGV 186 Query: 500 SMFIQM----KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 FIQ K P + M++ P++ ++ S + L +YWS I+Q Sbjct: 187 LYFIQAWVSSKQMPEEQRQMTYMMMIVSPIMIIWISLSSASALGLYWSVGAAFLIIQ 243 >gi|85057752|ref|YP_456668.1| 60 kDa inner membrane protein [Aster yellows witches'-broom phytoplasma AYWB] gi|84789857|gb|ABC65589.1| 60 kDa inner membrane protein [Aster yellows witches'-broom phytoplasma AYWB] Length = 513 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 25/222 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF----KQSPPQVLQK 413 GN G+ I+L TVF++ L +P+ K + NM IQ +I+++++K+ + Q +Q Sbjct: 282 GNLGLGIVLATVFIRTLTWPIYTKTSTLSMNMSLIQSEIEKVKQKYAIKKDLASAQKMQL 341 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---------ISLEMRHAPFWGWIKD 464 ++++Y+ +N + G LQ+P+F AI + +S + ++ PF G I + Sbjct: 342 EILKVYRKNNFS-FWGFLLSFLQLPLFIAINQTLSRFIIPGGIFATDKLIEKPFLGLI-N 399 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHV--------GIWPIIMSLSMFIQMKMSPPPADKGQ 516 L ++P N F +F +L F + M + + S + + K ++K Sbjct: 400 LKPSNPNNAFVIF-LLSFLVGATMFILNKISFKKPDYLKTPSYHLTSEQKQKAKQSEKSI 458 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ +M ++ VF S P L +YW N +I Q + K Sbjct: 459 KIMSVFMILMMVFFSRSNPI-LSLYWIVGNTYTIFQTLLTRK 499 >gi|331002963|ref|ZP_08326475.1| hypothetical protein HMPREF0491_01337 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413007|gb|EGG92382.1| hypothetical protein HMPREF0491_01337 [Lachnospiraceae oral taxon 107 str. F0167] Length = 418 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 65/116 (56%), Gaps = 8/116 (6%) Query: 337 GWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 GWF A+ + +M+ +++ + N G+AI++ T+ + ++ PL Q S M IQP+ Sbjct: 15 GWF---AEILGFIMNLIFDIGITNIGVAIIVFTIVINIIMIPLTINQQKSQKLMAVIQPE 71 Query: 396 IDELREKFK---QSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + +++K+K + V A + +Y + + GC P+L+Q+P+ F +Y+VI Sbjct: 72 VKAIQDKYKGKTDNESAVKMNAETRAVYSKYGTSMTGGCLPLLIQMPILFGLYQVI 127 >gi|227515638|ref|ZP_03945687.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus fermentum ATCC 14931] gi|227086068|gb|EEI21380.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus fermentum ATCC 14931] Length = 303 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 31/229 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FG----IAIMLTTVFVKLLFFPLAKKQYVSTANM 389 +G Y ++AKPM LM +F L GN +G +++ + + L KK + M Sbjct: 32 YGMVYDYLAKPMQHLMEWFAGLFGNSYGWAIVALVVVVRLILLPLMMSQMKKSTMMQERM 91 Query: 390 KNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +QP++ L+E+ K++ Q +AM+ YK +N++ G C P+L+Q+PVF A+ Sbjct: 92 AMLQPQMRALQERQKRAKTPEEQAAASQAMMSFYKDNNVSLTGGIGCLPLLIQLPVFSAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S ++ A F+G L + + + + + + G ++ Sbjct: 152 YFAIRYSPDLAQASFFG----LQLGQRSALLAIMAFVAYLIQG---------------WL 192 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M P K M L P++ +F AGL +Y+ V +I+Q Sbjct: 193 SMLGVPEDQKKQMRMALMMSPIMILFISWQASAGLGLYFFIGGVFAILQ 241 >gi|41410445|ref|NP_963281.1| putative inner membrane protein translocase component YidC [Mycobacterium avium subsp. paratuberculosis K-10] gi|38503196|sp|Q9L7M1|OXAA_MYCPA RecName: Full=Membrane protein oxaA gi|6969277|gb|AAF33698.1| unknown [Mycobacterium avium subsp. paratuberculosis] gi|41399279|gb|AAS06897.1| hypothetical protein MAP_4347c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 353 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/279 (21%), Positives = 111/279 (39%), Gaps = 54/279 (19%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG------NF---GIAIMLTTVFVKLLFFPLAKK 381 ++L D+ F+ P+ +M +Y L NF +++M ++ L + + Sbjct: 2 DLLFDFFSLDFVYYPVSWIMWVWYKLFAAMLGPSNFFAWALSVMFLVFTLRALLYKPFVR 61 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 62 QIRTTRQMQELQPQIKALQKKYGKDR-QRMALEMQKLQREHGFNPILGCLPMLAQIPVFL 120 Query: 442 AIYKVIS-----------------------------------ISLEMRHAPFWGWIKDLA 466 +Y V+ + + AP ++ Sbjct: 121 GLYHVLRSFNRTTGGFGQPHLSVVQNRLTGNYVFTPTDVGHFLDANLFGAPIGAFMTQRT 180 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 D F+ ++ LP + G+ S + + SP A Q ++N + + Sbjct: 181 GLDAFTYFSRPAVIAVGLPVMILAGVATYFNSRASVA--RQSPEAAANPQTAMMNKL-AL 237 Query: 527 FVFALSS------FPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF L P +I+YW +N+ + QQ + M Sbjct: 238 YVFPLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGM 276 >gi|260584053|ref|ZP_05851801.1| membrane protein OxaA 2 [Granulicatella elegans ATCC 700633] gi|260158679|gb|EEW93747.1| membrane protein OxaA 2 [Granulicatella elegans ATCC 700633] Length = 314 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/231 (22%), Positives = 112/231 (48%), Gaps = 33/231 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANM 389 +G Y ++A P ++++ + +G N+ I+IM+ ++ V+++ P KQ ++ M Sbjct: 34 YGIVYDYLAVPTQTILNWIASAIGGNYVISIMIVSIVVRIILMPTMFKQMKTMLMNQEKM 93 Query: 390 KNIQPKIDELREKFKQSP-PQV---LQKAMIQLYKTHNIN----PLAGCWPILLQIPVFF 441 ++P ID++ E++ +P P+ +Q+ + +Y+ +N++ +GC P+L+ +PV+ Sbjct: 94 ALLKPYIDKMNERYGDNPTPEQRMEVQQYTMDIYRLNNVSLTGGVASGCLPVLVTMPVYS 153 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A+Y I S E+ ++ F G + YLP + + +I Sbjct: 154 ALYNAILYSPEISNSSFMG----------------VSLGSTYLPIAIATAVIYLIQGY-- 195 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 Q+ M + +A + MPV+ + AG+ IY+ S + +I+Q Sbjct: 196 ISQLYMDETQKAQAKATLF-LMPVMMLMFTVGTAAGIGIYFFTSGLTAILQ 245 >gi|330719323|ref|ZP_08313923.1| preprotein translocase subunit YidC [Leuconostoc fallax KCTC 3537] Length = 313 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 13/136 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL-AKKQYVSTAN---MKN 391 + +I P+ +M+ N VG G AI++ T ++L+ P +Q ST N M+ Sbjct: 31 YRWIGHPLADIMTSIANFVGGTNGIGWAIIIITAVLRLILLPFFLNQQKASTINQIKMQQ 90 Query: 392 IQPKIDEL----REKFKQSPPQVLQKAMIQLYKTHNINPLAGC--WPILLQIPVFFAIYK 445 ++P+ID+L R+ Q Q AM+ LY+ +N++ G + +Q+PVF +Y Sbjct: 91 LKPEIDKLQAITRKAGTQQEQQQASMAMMSLYRENNVSLTGGISFLTMAMQVPVFSGLYS 150 Query: 446 VISISLEMRHAPFWGW 461 I S +R A F+G+ Sbjct: 151 AILHSPSLRDATFFGF 166 >gi|15611057|ref|NP_218438.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis H37Rv] gi|15843555|ref|NP_338592.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis CDC1551] gi|31795094|ref|NP_857587.1| putative inner membrane protein translocase component YidC [Mycobacterium bovis AF2122/97] gi|148663788|ref|YP_001285311.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis H37Ra] gi|148825129|ref|YP_001289883.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis F11] gi|167969459|ref|ZP_02551736.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis H37Ra] gi|215405979|ref|ZP_03418160.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis 02_1987] gi|215413849|ref|ZP_03422514.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis 94_M4241A] gi|215425183|ref|ZP_03423102.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis T92] gi|215432902|ref|ZP_03430821.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis EAS054] gi|215448268|ref|ZP_03435020.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis T85] gi|219555768|ref|ZP_03534844.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis T17] gi|254233403|ref|ZP_04926729.1| hypothetical protein TBCG_03848 [Mycobacterium tuberculosis C] gi|254366457|ref|ZP_04982501.1| conserved transmembrane protein [Mycobacterium tuberculosis str. Haarlem] gi|254548925|ref|ZP_05139372.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260184850|ref|ZP_05762324.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis CPHL_A] gi|260198981|ref|ZP_05766472.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis T46] gi|260203134|ref|ZP_05770625.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis K85] gi|289441364|ref|ZP_06431108.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289445522|ref|ZP_06435266.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289556189|ref|ZP_06445399.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289567878|ref|ZP_06448105.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289572573|ref|ZP_06452800.1| membrane protein oxaA [Mycobacterium tuberculosis K85] gi|289747765|ref|ZP_06507143.1| conserved transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289748459|ref|ZP_06507837.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289756056|ref|ZP_06515434.1| membrane protein oxaA [Mycobacterium tuberculosis EAS054] gi|289760094|ref|ZP_06519472.1| membrane protein oxaA [Mycobacterium tuberculosis T85] gi|289764112|ref|ZP_06523490.1| conserved transmembrane protein [Mycobacterium tuberculosis GM 1503] gi|294995603|ref|ZP_06801294.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis 210] gi|297733603|ref|ZP_06962721.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis KZN R506] gi|298527393|ref|ZP_07014802.1| membrane protein oxaA [Mycobacterium tuberculosis 94_M4241A] gi|306778285|ref|ZP_07416622.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|306778815|ref|ZP_07417152.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|306786842|ref|ZP_07425164.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|306795591|ref|ZP_07433893.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|306801566|ref|ZP_07438234.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|306970172|ref|ZP_07482833.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|306974404|ref|ZP_07487065.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|307082112|ref|ZP_07491282.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|307086723|ref|ZP_07495836.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|308375034|ref|ZP_07667929.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|54038804|sp|P65627|OXAA_MYCBO RecName: Full=Membrane protein oxaA gi|54041693|sp|P65626|OXAA_MYCTU RecName: Full=Membrane protein oxaA gi|2808706|emb|CAA16234.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13883933|gb|AAK48406.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31620692|emb|CAD96138.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] gi|124603196|gb|EAY61471.1| hypothetical protein TBCG_03848 [Mycobacterium tuberculosis C] gi|134151969|gb|EBA44014.1| conserved transmembrane protein [Mycobacterium tuberculosis str. Haarlem] gi|148507940|gb|ABQ75749.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis H37Ra] gi|148723656|gb|ABR08281.1| conserved transmembrane protein [Mycobacterium tuberculosis F11] gi|289414283|gb|EFD11523.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289418480|gb|EFD15681.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289440821|gb|EFD23314.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289537004|gb|EFD41582.1| membrane protein oxaA [Mycobacterium tuberculosis K85] gi|289541631|gb|EFD45280.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289688293|gb|EFD55781.1| conserved transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289689046|gb|EFD56475.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289696643|gb|EFD64072.1| membrane protein oxaA [Mycobacterium tuberculosis EAS054] gi|289711618|gb|EFD75634.1| conserved transmembrane protein [Mycobacterium tuberculosis GM 1503] gi|289715658|gb|EFD79670.1| membrane protein oxaA [Mycobacterium tuberculosis T85] gi|298497187|gb|EFI32481.1| membrane protein oxaA [Mycobacterium tuberculosis 94_M4241A] gi|308213435|gb|EFO72834.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|308328152|gb|EFP17003.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308328614|gb|EFP17465.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|308343887|gb|EFP32738.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|308347671|gb|EFP36522.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|308351589|gb|EFP40440.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|308352296|gb|EFP41147.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|308356299|gb|EFP45150.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|308360186|gb|EFP49037.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|308363873|gb|EFP52724.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|323717337|gb|EGB26542.1| membrane protein [Mycobacterium tuberculosis CDC1551A] gi|326905754|gb|EGE52687.1| conserved membrane protein [Mycobacterium tuberculosis W-148] gi|328460699|gb|AEB06122.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207] Length = 366 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 10/126 (7%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG------NF---GIAIMLTTVFVKLLFFPLAKK 381 +L D+ FI P+ +M +Y L NF +++M ++ L + + Sbjct: 2 SLLFDFFSLDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVR 61 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 62 QIRTTRQMQELQPQIKALQKKYGKDR-QRMALEMQKLQREHGFNPILGCLPMLAQIPVFL 120 Query: 442 AIYKVI 447 +Y V+ Sbjct: 121 GLYHVL 126 >gi|134097490|ref|YP_001103151.1| putative inner membrane protein translocase component YidC [Saccharopolyspora erythraea NRRL 2338] gi|133910113|emb|CAM00226.1| 60 kDa membrane insertion protein [Saccharopolyspora erythraea NRRL 2338] Length = 342 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 21/127 (16%) Query: 361 GIAIMLTTVFV----KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 G A L+ F+ +++ A Q + M+ P+I +LREK K ++ Q+ M Sbjct: 21 GFAWALSVFFLVFSLRVVLLKPAISQMRAGRKMQKFAPQIQKLREKHKNDRQRMAQE-MQ 79 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN-IFT 475 +L H +NPL GC P LLQIPVF +++ V ++D P+N IF Sbjct: 80 KLQSEHGVNPLGGCLPALLQIPVFLSLFTV---------------LRDFKPGAPSNYIFD 124 Query: 476 LFGILPF 482 G+ F Sbjct: 125 ADGVRSF 131 >gi|121635907|ref|YP_976130.1| putative inner membrane protein translocase component YidC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121639832|ref|YP_980056.1| putative inner membrane protein translocase component YidC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224992327|ref|YP_002647017.1| putative inner membrane protein translocase component YidC [Mycobacterium bovis BCG str. Tokyo 172] gi|121491554|emb|CAL70011.1| Probable conserved transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121495480|emb|CAL73969.1| Probable conserved transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224775443|dbj|BAH28249.1| putative inner membrane protein translocase component YidC [Mycobacterium bovis BCG str. Tokyo 172] Length = 366 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 10/126 (7%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG------NF---GIAIMLTTVFVKLLFFPLAKK 381 +L D+ FI P+ +M +Y L NF +++M ++ L + + Sbjct: 2 SLLFDFFSLDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVR 61 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 62 QIRTTRQMQELQPQIKALQKKYGKDR-QRMALEMQKLQREHGFNPILGCLPMLAQIPVFL 120 Query: 442 AIYKVI 447 +Y V+ Sbjct: 121 GLYHVL 126 >gi|319949435|ref|ZP_08023496.1| putative inner membrane protein translocase component YidC [Dietzia cinnamea P4] gi|319436897|gb|EFV91956.1| putative inner membrane protein translocase component YidC [Dietzia cinnamea P4] Length = 400 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I L LLF+P A KQ + M+ +QPK+ EL++++K + L +L K Sbjct: 49 IFLVVTLRALLFWP-AAKQIRFSRKMQELQPKMKELQKRYKNDR-EKLAVETRKLQKQEG 106 Query: 424 INPLAGCWPILLQIPVFFAIYKVI 447 NPL GC P+L+QIPVF ++ V+ Sbjct: 107 FNPLLGCLPMLIQIPVFLGLFHVL 130 >gi|325474002|gb|EGC77190.1| inner membrane protein [Treponema denticola F0402] Length = 901 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/218 (21%), Positives = 102/218 (46%), Gaps = 23/218 (10%) Query: 345 PMFMLMSYFYNLVGNF-----GIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPK 395 P++M + + + N G++I++ ++ + L+ P+ K Q + K ++PK Sbjct: 12 PVYMFVEFILFIANNITQDHIGLSIIILSLGINLITLPIYNVAEKWQEMERIIQKRMKPK 71 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 +++++ FK ++ A + H + L + + +QIP F A Y+++S ++ Sbjct: 72 VNDIKAVFKGDERYMILSAYYRQNNYHPLYALRSLFALFIQIPFFIAAYQLLSELPALKE 131 Query: 456 APFWGWIKDLAAADP-TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F ++KDL A D NI G + + + PIIM++ + + Sbjct: 132 TSFL-FLKDLGAPDKLINI------------GSVSLNLLPIIMTVINIAASAVYTKDLEL 178 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + L +F+ L + P+GL++YW+ +N+ S+ + Sbjct: 179 KDKLTLYLTAFLFLILLYNSPSGLVLYWTLNNIFSLFK 216 >gi|253800971|ref|YP_003033973.1| hypothetical protein TBMG_03969 [Mycobacterium tuberculosis KZN 1435] gi|253322475|gb|ACT27078.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435] Length = 366 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 10/126 (7%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG------NF---GIAIMLTTVFVKLLFFPLAKK 381 +L D+ FI P+ +M +Y L NF +++M ++ L + + Sbjct: 2 SLLFDFFSLDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVR 61 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 62 QIRTTRQMQELQPQIKALQKKYGKDR-QRMALEMQKLQREHGFNPILGCLPMLAQIPVFL 120 Query: 442 AIYKVI 447 +Y V+ Sbjct: 121 GLYHVL 126 >gi|317509424|ref|ZP_07967042.1| YidC/Oxa1 family membrane protein insertase [Segniliparus rugosus ATCC BAA-974] gi|316252253|gb|EFV11705.1| YidC/Oxa1 family membrane protein insertase [Segniliparus rugosus ATCC BAA-974] Length = 320 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 8/116 (6%) Query: 339 FYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKL--LFFPLAKKQYVSTANMKNIQ 393 +Y ++ +++ F ++G FG A+ + + L L + A +Q M+ IQ Sbjct: 6 YYPVSGVLWLWHWVFSQILGPESGFGWALSVVALVCTLRALLYAPAIRQIRFMRKMQEIQ 65 Query: 394 PKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P++ ++ K+ K Q L+ M +L K H NPL GC P+LLQIPVF +Y V+S Sbjct: 66 PQMKAIQTKYAKDRQRQALE--MQKLQKEHGFNPLLGCLPMLLQIPVFIGLYHVLS 119 >gi|299783425|gb|ADJ41423.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus fermentum CECT 5716] Length = 290 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 31/229 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FG----IAIMLTTVFVKLLFFPLAKKQYVSTANM 389 +G Y ++AKPM LM +F L GN +G +++ + + L KK + M Sbjct: 19 YGMVYDYLAKPMQHLMEWFAGLFGNSYGWAIVALVVVVRLILLPLMMSQMKKSTMMQERM 78 Query: 390 KNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +QP++ L+E+ K++ Q +AM+ YK +N++ G C P+L+Q+PVF A+ Sbjct: 79 AMLQPQMRALQERQKRAKTPEEQAAASQAMMSFYKDNNVSLTGGIGCLPLLIQLPVFSAL 138 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S ++ A F+G L + + + + + + G ++ Sbjct: 139 YFAIRYSPDLAQASFFG----LQLGQRSALLAIMAFVAYLIQG---------------WL 179 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M P K M L P++ +F AGL +Y+ V +I+Q Sbjct: 180 SMLGVPEDQKKQMRMALMMSPIMILFISWQASAGLGLYFFIGGVFAILQ 228 >gi|15672551|ref|NP_266725.1| OxaA-like protein precursor [Lactococcus lactis subsp. lactis Il1403] gi|12723459|gb|AAK04667.1|AE006291_1 conserved hypothetical protein [Lactococcus lactis subsp. lactis Il1403] Length = 307 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 40/221 (18%) Query: 339 FYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQ-YVST---ANMKNIQ 393 + F+ +PM + F N L +G I+ T+ ++ L PL Q Y ST M + Sbjct: 33 YNFLVRPMSAFVDLFANNLHMGYGWGIIFVTLIIRFLILPLGLNQAYKSTYMQEKMAYLA 92 Query: 394 PKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVI 447 P L+E+ K Q+P + Q+A++ K + IN L+ GC P+L+Q P F A+Y Sbjct: 93 PVFAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSIGCLPMLIQWPFFIALYNAA 152 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504 + + + + F+G +P P + V II + FIQ Sbjct: 153 AYTTGISSSTFYG-------------------IPLGHPSVVLV----IISGVLYFIQTWI 189 Query: 505 --MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 + M+P G AM++ ++ VF+ S PAG+ +YW+ Sbjct: 190 STLSMTPEQKKSGMAMLIMSPAMIVVFSFMS-PAGVALYWA 229 >gi|281491036|ref|YP_003353016.1| OxaA/YidC family membrane protein [Lactococcus lactis subsp. lactis KF147] gi|38503174|sp|Q9CHZ9|OXAA2_LACLA RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|281374794|gb|ADA64314.1| Membrane protein, OxaA/YidC family [Lactococcus lactis subsp. lactis KF147] gi|326406070|gb|ADZ63141.1| OxaA/YidC family membrane protein [Lactococcus lactis subsp. lactis CV56] Length = 320 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 32/217 (14%) Query: 339 FYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQ-YVST---ANMKNIQ 393 + F+ +PM + F N L +G I+ T+ ++ L PL Q Y ST M + Sbjct: 46 YNFLVRPMSAFVDLFANNLHMGYGWGIIFVTLIIRFLILPLGLNQAYKSTYMQEKMAYLA 105 Query: 394 PKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVI 447 P L+E+ K Q+P + Q+A++ K + IN L+ GC P+L+Q P F A+Y Sbjct: 106 PVFAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSIGCLPMLIQWPFFIALYNAA 165 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLF-GILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + F+G + P+ + + G+L F + W I +LSM Sbjct: 166 AYTTGISSSTFYG----IPLGHPSVVLVIISGVLYF-------IQTW--ISTLSM----- 207 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 +P G AM++ ++ VF+ S PAG+ +YW+ Sbjct: 208 -TPEQKKSGMAMLIMSPAMIVVFSFMS-PAGVALYWA 242 >gi|19114471|ref|NP_593559.1| mitochondrial inner membrane translocase Oxa101 [Schizosaccharomyces pombe 972h-] gi|13124375|sp|O14300|OXA11_SCHPO RecName: Full=Mitochondrial inner membrane protein oxa1-1; AltName: Full=Cytochrome oxidase biogenesis protein 1-1; Short=Sp1; Flags: Precursor gi|2370552|emb|CAB11488.1| mitochondrial inner membrane translocase Oxa101 [Schizosaccharomyces pombe] gi|2739283|emb|CAA63843.1| oxa1Sp1 [Schizosaccharomyces pombe] Length = 374 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 36/212 (16%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 ++I+LTT+ V+L P+ + ++ + IQP++ + E K + Q A+ Q Sbjct: 88 VSIILTTLGVRLALTPVMIASFRNSTKLSVIQPEMKKELEAIKTAKLDNDQLALNQHSIA 147 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAADP 470 +Y HN+NP A L Q VFF AI K+ +S++ W KDL+ DP Sbjct: 148 LRGIYLKHNVNPFAIFILPLTQSAVFFSFFYAIRKMSRLSVDGFTTGGLAWFKDLSIPDP 207 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 + ILP G M G +QM + + G + NW F+ Sbjct: 208 ------YCILPIINAGLMFSG-----------MQMNRANTASTIGNST--NWRTFFFLCC 248 Query: 531 LSS------FPAGLIIYWSWSNVISIVQQAVI 556 L S PA + +YW S++ +IVQ ++ Sbjct: 249 LLSPLLTAKLPAAIFMYWIPSSLFNIVQGYIL 280 >gi|89097506|ref|ZP_01170395.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911] gi|89087802|gb|EAR66914.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911] Length = 262 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 30/213 (14%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----IQPKIDELREKFKQSPP----Q 409 GNFG++I+L T+ ++L PL KQY +MK ++P++D+++ + K++ Q Sbjct: 57 GNFGLSIILITLIIRLALMPLMLKQYKRQQDMKGKMDVLKPEMDKIQAQLKKTKDQKEQQ 116 Query: 410 VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEM-RHAPFWGWIKDLAA 467 LQ+ M LY+ H +NPL GC PIL+Q+P+ Y I S E+ H+ W Sbjct: 117 KLQQEMFALYRKHGVNPLNMGCLPILIQMPILMGFYYAIRSSHEIATHSFLW-----FNL 171 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 P + T + +YL + P+ M +SP M VVF Sbjct: 172 GQPDLLITAAAGIVYYLQFKVTQANMPVQQQNQMKFMGLLSP------------VMIVVF 219 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 F S PA L +YW+ IVQ + +++ Sbjct: 220 SF---SAPAALPLYWTVGGTFLIVQTLIGRRLY 249 >gi|227543308|ref|ZP_03973357.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51866] gi|227180921|gb|EEI61893.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51866] Length = 372 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 6/84 (7%) Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-----KQSPPQVLQKAMIQLYKTHN 423 + V+ L PLA K YVS ++P + L+E + K+S ++ +K+ QL H Sbjct: 41 ITVRSLIAPLAWKMYVSARRTAIMRPHMASLKEDYRGKLDKESQAELSRKSQ-QLMDEHE 99 Query: 424 INPLAGCWPILLQIPVFFAIYKVI 447 +NP+AGC P+L+Q PV +Y+++ Sbjct: 100 VNPMAGCAPMLIQFPVILGLYRMV 123 >gi|256548863|gb|ACU82913.1| 60 kD inner-membrane protein [Buchnera aphidicola (Acyrthosiphon pisum)] Length = 310 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 23/233 (9%) Query: 155 PIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQ 208 PIK + KN +++++T L Y +I V N S + + + G+I + K Sbjct: 90 PIKWLSKNG--VIYKKTFILKPNRYDVQIEYDVYNASKESLNMNIFGQIKQTINLPKKRN 147 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH--ESNSWLGISDKYWASVFIP- 265 + F +Q A +KY ++ N H + W+ + +Y+A +IP Sbjct: 148 VYSGNFALQTFRGAAYSSDDNKYEKYKFDMIANNKNLHIITESGWIAMLQQYFAVAWIPD 207 Query: 266 --SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 K T + S H + + I I P + L+ G P I E Sbjct: 208 NLGKNTIYTSSLD-----HDTAVIGYKSPIINIPPNSRSIIKSKLWIG----PEIQK-EM 257 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 L P ++ +D+GW +F+++P+F L++ Y+++GN+G +I+L T ++ L + Sbjct: 258 KLVAPNLDLTVDYGWLWFLSQPLFKLLTILYSIIGNWGFSIILITFIMRGLTY 310 >gi|183985455|ref|YP_001853746.1| transmembrane protein [Mycobacterium marinum M] gi|183178781|gb|ACC43891.1| conserved transmembrane protein [Mycobacterium marinum M] Length = 371 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 7/114 (6%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I W W+ A + + S F+ + +++M ++ L + +Q +T M+ +Q Sbjct: 20 IMWVWYKLFA--LVLGPSNFFA----WALSVMFLVFTLRALLYKPFVRQIRTTRQMQELQ 73 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 P+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF +Y V+ Sbjct: 74 PQIKALQKKYGKDR-QRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVL 126 >gi|296141904|ref|YP_003649147.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella paurometabola DSM 20162] gi|296030038|gb|ADG80808.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella paurometabola DSM 20162] Length = 390 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 5/103 (4%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNIQPKIDELREKFK 404 L S L + G+ L+ +F+ L + K +V +T M+ QP++ LR+K+ Sbjct: 24 LFSLIPGLGPDSGVTWALSVIFLVLTLRAILYKPFVRQIRTTRQMQEFQPQMQALRKKYG 83 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + Q L M +L K H NPL GC P LLQ+PVF ++ V+ Sbjct: 84 KDR-QKLALEMQKLQKEHGFNPLLGCLPALLQVPVFIGLFHVL 125 >gi|118466815|ref|YP_884420.1| inner membrane protein translocase component YidC [Mycobacterium avium 104] gi|118168102|gb|ABK68999.1| membrane protein OxaA [Mycobacterium avium 104] Length = 350 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/239 (21%), Positives = 95/239 (39%), Gaps = 45/239 (18%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +++M ++ L + +Q +T M+ +QP+I L++K+ + Q + M +L + Sbjct: 39 LSVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKALQKKYGKDR-QRMALEMQKLQRE 97 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVIS--------------------------------- 448 H NP+ GC P+L QIPVF +Y V+ Sbjct: 98 HGFNPILGCLPMLAQIPVFLGLYHVLRSFNRTTGGFGQPHLSVVQNRLTGNYVFTPTDVG 157 Query: 449 --ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + AP ++ D F+ ++ LP + G+ S + + Sbjct: 158 HFLDANLFGAPIGAFMTQRTGLDAFTYFSRPAVIAVGLPVMILAGVATYFNSRASVA--R 215 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSS------FPAGLIIYWSWSNVISIVQQAVIMKM 559 SP A Q ++N + ++VF L P +I+YW +N+ + QQ + M Sbjct: 216 QSPEAAANPQTAMMNKL-ALYVFPLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGM 273 >gi|319950012|ref|ZP_08023991.1| putative inner membrane protein translocase component YidC [Dietzia cinnamea P4] gi|319436323|gb|EFV91464.1| putative inner membrane protein translocase component YidC [Dietzia cinnamea P4] Length = 248 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 4/71 (5%) Query: 381 KQYVSTANMKNIQPKIDELREKFK--QSPP--QVLQKAMIQLYKTHNINPLAGCWPILLQ 436 +Q S M + PK+ EL+ K+K +SP Q K M LY +NPLAGC P+L+Q Sbjct: 52 RQQYSMRKMAQLAPKMKELQNKYKDRKSPEDRQEQAKEMQALYADAGVNPLAGCLPLLVQ 111 Query: 437 IPVFFAIYKVI 447 IPVF +Y V+ Sbjct: 112 IPVFLGLYYVL 122 >gi|328948290|ref|YP_004365627.1| membrane protein insertase, YidC/Oxa1 family [Treponema succinifaciens DSM 2489] gi|328448614|gb|AEB14330.1| membrane protein insertase, YidC/Oxa1 family [Treponema succinifaciens DSM 2489] Length = 894 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 16/198 (8%) Query: 359 NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 N G+A++ ++ V L PL + Q +N++P +++ FK ++ Sbjct: 30 NHGLAVIGLSIVVTLCTLPLYMVAEQWQEKEREIQENLKPGTKRIKKFFKGDEQYMILTT 89 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 + H + L + +L+QIP F A Y +S LE + +IKD D T Sbjct: 90 FYKQNHYHPLMALRSSFSLLIQIPFFIAAYTFLS-HLEALKGVSFLFIKDFGNPDAT--- 145 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 F I FY + + PI M+L I + + + + VF+ L + Sbjct: 146 --FKIGSFY------INVLPIAMTLINCISGALYSKGHGINEKIQIFGCAAVFLLLLYNS 197 Query: 535 PAGLIIYWSWSNVISIVQ 552 PAGL++YW+ +N+ S+V+ Sbjct: 198 PAGLVVYWTMNNIFSLVK 215 >gi|25029500|ref|NP_739554.1| putative inner membrane protein translocase component YidC [Corynebacterium efficiens YS-314] gi|259508318|ref|ZP_05751218.1| membrane protein OxaA [Corynebacterium efficiens YS-314] gi|23494789|dbj|BAC19754.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259164136|gb|EEW48690.1| membrane protein OxaA [Corynebacterium efficiens YS-314] Length = 316 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 53/89 (59%), Gaps = 1/89 (1%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 + ++IM T V+++ S M+++ P++ E+REK+K +++ ++ +L Sbjct: 31 TWALSIMFLTFTVRVVLVKPMVNTMRSQRKMQDMAPRMQEIREKYKNDQQKMMAESR-KL 89 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVI 447 K +NP+AGC P+L+QIPVF ++ V+ Sbjct: 90 QKEVGVNPIAGCLPMLVQIPVFLGLFHVL 118 >gi|193217059|ref|YP_002000301.1| putative inner membrane protein translocase component YidC [Mycoplasma arthritidis 158L3-1] gi|193002382|gb|ACF07597.1| preprotein translocase subunit YidC [Mycoplasma arthritidis 158L3-1] Length = 650 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/242 (23%), Positives = 111/242 (45%), Gaps = 33/242 (13%) Query: 336 WG---WFYFIAKPMFMLMSYFYNLVGNFG----IAIMLTTVFVKLLFFPLAKKQYVSTAN 388 WG ++ +P+ + M+ +G G +A+++T + V+L+ F ++ K S + Sbjct: 393 WGLGPFYGLFVQPVNLFMNAIITGLGTTGWSVILALVVTVIIVRLIAFAVSFKATFSQSR 452 Query: 389 MKNIQPKIDELREKFKQ--SPPQVLQKAMIQ---LYKTHNINPLAGCWPILLQIPVFFAI 443 M+ K ++ K+ + S Q+ Q+ ++ LYK I+P +G + +P+ + Sbjct: 453 MEEFNQKKAKIEAKYAEYKSDKQMQQRKQLEIAELYKKEKISPWSGLISSFITLPILIVV 512 Query: 444 YKVISISLEMRHAPFW------GWIKDLAAAD----PTNIFTLFGI--LPFYLPGFMHVG 491 +++IS S E++ A ++ I+ + A D P IF++ GI L Y+P Sbjct: 513 FRIISASPEIKQATWYSIQLSTSSIRRVIAGDLIYLPIIIFSV-GIQALAQYMP------ 565 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 I+ ++ A K + N + ++F+ F AGL IYW + +I+ Sbjct: 566 --KILNRKKKSLRANAYQQAALKKENKKFNIISLIFIGIGVIFSAGLQIYWIIGGIWTIL 623 Query: 552 QQ 553 Q Sbjct: 624 QH 625 >gi|315640647|ref|ZP_07895752.1| membrane protein [Enterococcus italicus DSM 15952] gi|315483586|gb|EFU74077.1| membrane protein [Enterococcus italicus DSM 15952] Length = 313 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 25/180 (13%) Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWP 432 +KK V + M+ ++P++D + KQ+ + Q M ++YK +N+N L G C P Sbjct: 88 SKKAMVQSEKMQYLKPQMDIAQANLKQATTREEQLKAQTEMQKIYKENNVNMLGGIGCLP 147 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+Q+P+F A+Y +S + + A F G +L A+ ++ L G +VG Sbjct: 148 LLIQMPIFSALYFTVSYTQGINTATFMGV--NLGKAN---------LIFVALAGLSYVG- 195 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ + P K ++ P++ VF PAG+ +YW + S Q Sbjct: 196 -------QSYLSLIGIPEEQKKTMRSMMIVSPLMIVFMSLKAPAGVTLYWVIGGIFSCFQ 248 >gi|302753696|ref|XP_002960272.1| hypothetical protein SELMODRAFT_73518 [Selaginella moellendorffii] gi|300171211|gb|EFJ37811.1| hypothetical protein SELMODRAFT_73518 [Selaginella moellendorffii] Length = 315 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS--PPQVL---QKAMI 416 ++I LTTV V+ + PL Q STA ++P +++++ +Q+ P L ++ M Sbjct: 68 LSIALTTVAVRTMVLPLVIYQVKSTARFALLRPDLEKIKVDMEQANYDPVALAENKRKMA 127 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---WIKDLAAADPTNI 473 +L+ H +P LLQ P+F + + E + G W DL D Sbjct: 128 ELFAKHKTDPFTPLIGALLQGPIFMCFFFGLRTMAEKMDSFKEGGAFWFTDLTTPDE--- 184 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 Y+ F+ + I + L+ M+ P K IL M V+F+ + Sbjct: 185 --------LYILPFITTATFLITVELNAVDGMQGQP--NQKTMKNILRGMGVLFLPLTAQ 234 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 FP L YW SN+ S++Q A++ Sbjct: 235 FPKALFCYWVTSNLWSMLQGALL 257 >gi|240168405|ref|ZP_04747064.1| putative inner membrane protein translocase component YidC [Mycobacterium kansasii ATCC 12478] Length = 381 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 10/125 (8%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVG------NF---GIAIMLTTVFVKLLFFPLAKKQ 382 +L D+ F+ P+ +M +Y L NF +++M ++ L + +Q Sbjct: 3 LLFDFFSLDFVYYPVSWIMWVWYKLFALIFGPSNFFAWALSVMFLVFTLRALLYKPFVRQ 62 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 63 IRTTRQMQELQPQIKALQKKYGKDR-QRMAMEMQKLQREHGFNPILGCLPMLAQIPVFLG 121 Query: 443 IYKVI 447 +Y V+ Sbjct: 122 LYHVL 126 >gi|225376872|ref|ZP_03754093.1| hypothetical protein ROSEINA2194_02514 [Roseburia inulinivorans DSM 16841] gi|225211193|gb|EEG93547.1| hypothetical protein ROSEINA2194_02514 [Roseburia inulinivorans DSM 16841] Length = 699 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 60/103 (58%), Gaps = 1/103 (0%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+ +M Y LV N+G++I+L T+ K++ P++ ++ M IQP+I+E++ K Sbjct: 12 PLGYVMWGCYQLVKNYGLSIILFTLVSKIVMLPVSIMVQKNSIRMIQIQPQINEIKYKHA 71 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++ + M +L+K + +P+ G P+LLQIP+ + VI Sbjct: 72 GDKDRIADEQM-ELFKKAHYSPMLGMVPMLLQIPLVLGLINVI 113 >gi|227489035|ref|ZP_03919351.1| hypothetical protein HMPREF0294_2185 [Corynebacterium glucuronolyticum ATCC 51867] gi|227090980|gb|EEI26292.1| hypothetical protein HMPREF0294_2185 [Corynebacterium glucuronolyticum ATCC 51867] Length = 397 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 6/84 (7%) Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-----KQSPPQVLQKAMIQLYKTHN 423 + V+ L PLA K YVS ++P + L+E + K+S ++ +K+ QL H Sbjct: 40 ITVRSLIAPLAWKMYVSARRTAIMRPHMASLKEDYRGKLDKESQAELSRKSQ-QLMDEHE 98 Query: 424 INPLAGCWPILLQIPVFFAIYKVI 447 +NP+AGC P+L+Q PV +Y+++ Sbjct: 99 VNPMAGCAPMLIQFPVILGLYRMV 122 >gi|224541285|ref|ZP_03681824.1| hypothetical protein CATMIT_00445 [Catenibacterium mitsuokai DSM 15897] gi|224525789|gb|EEF94894.1| hypothetical protein CATMIT_00445 [Catenibacterium mitsuokai DSM 15897] Length = 293 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/233 (22%), Positives = 107/233 (45%), Gaps = 23/233 (9%) Query: 337 GWFYFI-----AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 G+F FI AK + ++ S+ GN ++L T+ + L+ P+ K +ST M+ Sbjct: 53 GFFDFILTIPIAKGILLITSW----TGNVLWGVILMTILINLIILPVMIKSTISTQKMQM 108 Query: 392 IQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +QP+++ ++ K++ Q+ +Q ++ LYK +N++ W L +P+ FA+Y + Sbjct: 109 LQPEMERIQNKYRGKNDQTSQMRMQNEIMNLYKKNNVSMFGSLWT-FLTLPIMFAMYGAV 167 Query: 448 SISLEMRHAPFWGW---IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + +G + L+ + IL L F + I +++ + Sbjct: 168 QRIQILYTSQAFGMNLGLTPLSQITSGKFIYIVVILVMALSQFFAIEINNLMLKRN---- 223 Query: 505 MKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 K P A + Q +N M ++ ++ P + YW +N+I++V+ I Sbjct: 224 -KKYKPSAQQNQMKTMNIVMTLMIIYFGLIMPTAMSFYWITTNLITVVRTVFI 275 >gi|229816221|ref|ZP_04446531.1| hypothetical protein COLINT_03271 [Collinsella intestinalis DSM 13280] gi|229808229|gb|EEP44021.1| hypothetical protein COLINT_03271 [Collinsella intestinalis DSM 13280] Length = 279 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 73/130 (56%), Gaps = 8/130 (6%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 H+Y+ I + ++ W W I + +F + G++G++I++ V ++LL P Sbjct: 8 CHNYQ----ILKVRIIRMWDW---IVQILFQALELIQRFAGDWGLSIIILVVIIRLLLTP 60 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 + K STA M+ +QPK+ E++E++ + PQ + + + Y + NP GC P+L+Q+ Sbjct: 61 MMLKSIKSTARMQVLQPKLLEIQERYA-ADPQRQAEELQKFYSENKFNPFGGCLPLLIQM 119 Query: 438 PVFFAIYKVI 447 P+ A++ ++ Sbjct: 120 PILVALFNLL 129 >gi|312142024|ref|YP_004009360.1| integral membrane protein [Rhodococcus equi 103S] gi|325677525|ref|ZP_08157189.1| membrane protein OxaA [Rhodococcus equi ATCC 33707] gi|311891363|emb|CBH50684.1| putative integral membrane protein [Rhodococcus equi 103S] gi|325551772|gb|EGD21470.1| membrane protein OxaA [Rhodococcus equi ATCC 33707] Length = 363 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 1/88 (1%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + +A+M ++ + + KQ +T M+ +QP+I L++K+ + Q + M +L Sbjct: 32 WALAVMFLVFTLRAILYKPFVKQVRTTRQMQELQPQIKALQKKYSKDR-QRMALEMQKLQ 90 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVI 447 K H NP+ GC P+LLQ PVF ++ V+ Sbjct: 91 KEHGFNPVMGCLPVLLQAPVFIGLFHVL 118 >gi|291230686|ref|XP_002735298.1| PREDICTED: Inner membrane protein OXA1L, mitochondrial-like [Saccoglossus kowalevskii] Length = 424 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 35/210 (16%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ--SPPQVLQKAM----I 416 AI TV + L FP+ + + + N+ P + L K + S L+ A + Sbjct: 138 AISCCTVIARFLIFPVVIRGQRNAVKLNNVMPTVQRLTNKMNEIRSSGSQLEIARATNEL 197 Query: 417 QLY-KTHNINPLAGCWPILLQIPVFFAIY----KVISISLEMRHAPFWGWIKDLAAADPT 471 Q++ K H +NP+ L+Q P+F + + K+ ++ +E W DL ADP Sbjct: 198 QMFMKKHGVNPMKNMLVPLVQAPIFISFFIGLRKMAALPVESMQTGGLYWFTDLTIADP- 256 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-----PADKGQAMILNWMPVV 526 +Y I P I +LSM +++ P + ++ +P V Sbjct: 257 ----------YY--------IMPAIATLSMLCIIELGGETGVQNPQMQNMKTVMRILPFV 298 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + +S PA + YW SN IS+ Q A++ Sbjct: 299 ILPFTASMPASVFCYWLTSNFISLGQVALL 328 >gi|118620076|ref|YP_908408.1| putative inner membrane protein translocase component YidC [Mycobacterium ulcerans Agy99] gi|118572186|gb|ABL06937.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99] Length = 371 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 7/114 (6%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I W W+ A + + S F+ + +++M ++ L + +Q +T M+ +Q Sbjct: 20 IMWVWYKLFA--LVLGPSNFFA----WALSVMFLVFTLRALLYKPFVRQIRTTRQMQELQ 73 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 P+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF +Y V+ Sbjct: 74 PQIKALQKKYGKDR-QRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVL 126 >gi|118472161|ref|YP_891135.1| inner membrane protein translocase component YidC [Mycobacterium smegmatis str. MC2 155] gi|118173448|gb|ABK74344.1| membrane protein OxaA [Mycobacterium smegmatis str. MC2 155] Length = 367 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +++M ++ + + KQ +T M+ +QP+I L++K+ + Q + M +L K Sbjct: 39 LSVMFLVFTLRAILYKPFVKQIRTTRQMQELQPQIKALQKKYGKDR-QRMALEMQKLQKE 97 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 H NP+ GC P+L Q+PVF +Y V+ Sbjct: 98 HGFNPILGCLPMLAQVPVFLGLYHVL 123 >gi|126438349|ref|YP_001074040.1| putative inner membrane protein translocase component YidC [Mycobacterium sp. JLS] gi|126238149|gb|ABO01550.1| 60 kDa inner membrane insertion protein [Mycobacterium sp. JLS] Length = 367 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 6/114 (5%) Query: 339 FYFIAKPMFMLMSYFYNLVG--NF---GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +Y ++ M++ F L+G NF +++M ++ + + +Q +T M+ +Q Sbjct: 11 YYPVSAIMWVWYKAFAFLLGPDNFFAWALSVMFLVFTLRAILYKPFVRQIRTTRQMQELQ 70 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 P+I L++K+ + Q + M +L K H NP+ GC P+L QIPVF +Y V+ Sbjct: 71 PQIKALQKKYGKDR-QRMALEMQKLQKEHGFNPILGCLPMLAQIPVFLGLYHVL 123 >gi|227500990|ref|ZP_03931039.1| sporulation associated-membrane protein [Anaerococcus tetradius ATCC 35098] gi|227216763|gb|EEI82161.1| sporulation associated-membrane protein [Anaerococcus tetradius ATCC 35098] Length = 244 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 40/225 (17%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + IAI++ T+ V LL P+ Q K +PK++E+++K+ Q++QK M QLY Sbjct: 33 YAIAIIIMTLLVSLLIIPMTVSQQKQAERTKIFKPKMEEIQKKYSYD-QQIMQKKMQQLY 91 Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISIS--------LEMRHAPFWGWIKDLAAADP 470 K + P ++GC +++QI + F +++++ + L+ F+ WI +L DP Sbjct: 92 KEEGVTPGISGCLVMIIQIMILFGLFRMMGDTTKYVFPEGLDNVRTNFY-WISNLLDKDP 150 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLS----MFIQMKMSPPPADKGQAMILN----W 522 F L P++ SLS MK +P G +N Sbjct: 151 Y-WFAL-----------------PLLTSLSQVAVQLFSMKTNPQMQQGGAMGNMNNMFLI 192 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI---MKMHGAEI 564 MP+++ F PAGL +Y++ S+V +V ++ MK + E+ Sbjct: 193 MPLMYFFIFRGLPAGLPLYYTLSSVFRLVIMVIMHFYMKANKTEL 237 >gi|329117705|ref|ZP_08246422.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parauberis NCFD 2020] gi|326908110|gb|EGE55024.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parauberis NCFD 2020] Length = 310 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 32/226 (14%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA-----KKQYVSTANMKNIQPK 395 I KPM + YF N +G FG++I++ T+ V+ + PL K Y S M ++P Sbjct: 41 IGKPMSYFIDYFANHMGLGFGLSIIIVTIIVRTIILPLGLYQSWKASYQSE-KMAYLKPI 99 Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 D + ++ K + Q Q ++ K + IN L G C P+L+Q+P F A+Y Sbjct: 100 FDPINQRMKNASTQEEKFAAQSDLMAAQKANGINMLGGMGCLPLLIQMPFFSAMYFAAMY 159 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + + F G DL + GI I+ ++ M+ Sbjct: 160 TKGISTSTFMGI--DLGSRS-----------------LALTGIIAILYFFQSWLSMQAVA 200 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ MP++ +F S PAG+ +YW SI+QQ + Sbjct: 201 EEQRAQMKTMMYTMPIMMIFMTLSLPAGVGLYWLVGGFFSIIQQLI 246 >gi|291531377|emb|CBK96962.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Eubacterium siraeum 70/3] Length = 441 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 2/94 (2%) Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y L+ NFG AI++ TV VKL PL KQ + A + PK+ E+++K++ + + Q Sbjct: 5 YLLLQNFGWAILIFTVIVKLAMLPLQIKQQKNMAFSQLFAPKVKEIQQKYRNNRDK--QA 62 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +Q + NP GC P++L + + F + V+ Sbjct: 63 EEMQKLQAQGYNPAGGCGPLVLTMIILFGVIDVV 96 >gi|326383905|ref|ZP_08205589.1| putative inner membrane protein translocase component YidC [Gordonia neofelifaecis NRRL B-59395] gi|326197364|gb|EGD54554.1| putative inner membrane protein translocase component YidC [Gordonia neofelifaecis NRRL B-59395] Length = 384 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 7/102 (6%) Query: 351 SYFYNLVGNFGIAIMLTTVFV-----KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 S N G GIA L+ VF+ +L+ P K Q +T M+ I P++ +R+K+ Sbjct: 22 SVMPNSPGWDGIAWALSVVFLVFTLRAILYKPFVK-QIRTTKQMQEINPQMQAIRKKYAN 80 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++ ++ M +L K H NPL GC P+ +QIPVF ++ V+ Sbjct: 81 DRVKMTEE-MQKLQKEHGFNPLLGCLPMFMQIPVFIGLFHVL 121 >gi|313660934|ref|ZP_07817814.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis KZN V2475] Length = 363 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +++M ++ L + +Q +T M+ +QP+I L++K+ + Q + M +L + Sbjct: 39 LSVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKALQKKYGKDR-QRMALEMQKLQRE 97 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 H NP+ GC P+L QIPVF +Y V+ Sbjct: 98 HGFNPILGCLPMLAQIPVFLGLYHVL 123 >gi|10122033|gb|AAG13422.1|AC051634_3 putative Oxa1 protein [Oryza sativa Japonica Group] Length = 487 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 22/227 (9%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +F + ++ Y + G N+ I L TV ++ PL Q +T + I+P+++ Sbjct: 122 FFPVAALQHVIDYIHTFTGLNWWACIALATVLIRSATVPLLVNQLKATQKLNAIRPEMEA 181 Query: 399 LREKFKQSPPQVLQKA---MIQLYKTHNINPLAGCWPILLQIPVF----FAIYKVISISL 451 ++E+ P+ ++ M L++ H ++P +L+Q P+F FAI +I Sbjct: 182 IKEEMNAMDPKSAKEGKAKMTALFQKHGVSPFTPLKGLLIQGPIFMSFFFAIRNMIDKVP 241 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 M+ W DL DP I + L F ++++ + +Q M P Sbjct: 242 SMKGGGSL-WFTDLTTPDPLYILPVLTALIF-------------LVTVELNLQEGMEGNP 287 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + M V+ V SF G+ YW SN+ ++ VI + Sbjct: 288 MARKMKNFSRGMAVLTVPFTMSFAKGIFCYWITSNLFTLTYGFVIRR 334 >gi|218755713|ref|ZP_03534509.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis GM 1503] gi|297636608|ref|ZP_06954388.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis KZN 4207] gi|308371552|ref|ZP_07667203.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|308336269|gb|EFP25120.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] Length = 363 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +++M ++ L + +Q +T M+ +QP+I L++K+ + Q + M +L + Sbjct: 39 LSVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKALQKKYGKDR-QRMALEMQKLQRE 97 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 H NP+ GC P+L QIPVF +Y V+ Sbjct: 98 HGFNPILGCLPMLAQIPVFLGLYHVL 123 >gi|332671327|ref|YP_004454335.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas fimi ATCC 484] gi|332340365|gb|AEE46948.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas fimi ATCC 484] Length = 268 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 P+ Q + A + P+I L+ + + P Q LQ+A +QLY PLAGC P+L Sbjct: 51 LIPVGVSQAKAEATRARLAPRIAALQRRHRHDP-QELQRATMQLYADEGTTPLAGCLPML 109 Query: 435 LQIPVFFAIYKV 446 Q PV IY V Sbjct: 110 AQAPVVGLIYAV 121 >gi|300855851|ref|YP_003780835.1| hypothetical protein CLJU_c26750 [Clostridium ljungdahlii DSM 13528] gi|300435966|gb|ADK15733.1| putative membrane protein [Clostridium ljungdahlii DSM 13528] Length = 213 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 74/141 (52%), Gaps = 2/141 (1%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +N G++GIA+++ T+ VK+L P++ KQ S + + K+++++ ++K Sbjct: 11 LLNHVFNFTGDWGIAVVVLTLIVKVLLMPMSMKQRFSILKQQKVAKKMEDIKIRYKNDKL 70 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + ++K + YK N+ + GC ++Q+P+ +YK I + W+ + + Sbjct: 71 K-MEKEIQNCYK-DNLKSMMGCLLTIIQLPIIGGLYKTIINMPVVSGTVLIPWVASIKLS 128 Query: 469 DPTNIFTLFGILPFYLPGFMH 489 D I + + LPG ++ Sbjct: 129 DSYFIVPIMYSIISMLPGLVN 149 >gi|19554287|ref|NP_602289.1| putative inner membrane protein translocase component YidC [Corynebacterium glutamicum ATCC 13032] gi|62391944|ref|YP_227346.1| inner membrane protein translocase component YidC [Corynebacterium glutamicum ATCC 13032] gi|145297091|ref|YP_001139912.1| putative inner membrane protein translocase component YidC [Corynebacterium glutamicum R] gi|21325870|dbj|BAC00491.1| Preprotein translocase subunit YidC [Corynebacterium glutamicum ATCC 13032] gi|41223091|emb|CAF19036.1| Preprotein translocase subunit YidC [Corynebacterium glutamicum ATCC 13032] gi|140847011|dbj|BAF56010.1| hypothetical protein [Corynebacterium glutamicum R] Length = 317 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 1/89 (1%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 + ++IM T V+++ S M+++ PK+ +REK+K +++++ +L Sbjct: 31 TWALSIMFLTFTVRMVLVKPMVNTMRSQRKMQDMAPKMQAIREKYKNDQQKMMEETR-KL 89 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVI 447 K +NP+AGC P+L+QIPVF ++ V+ Sbjct: 90 QKEVGVNPIAGCLPMLVQIPVFLGLFHVL 118 >gi|331083516|ref|ZP_08332628.1| hypothetical protein HMPREF0992_01552 [Lachnospiraceae bacterium 6_1_63FAA] gi|330404209|gb|EGG83757.1| hypothetical protein HMPREF0992_01552 [Lachnospiraceae bacterium 6_1_63FAA] Length = 424 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 78/146 (53%), Gaps = 16/146 (10%) Query: 341 FIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPL-------AKKQYVSTANMKNI 392 ++A+ + LM+ Y++ V N G+ I++ T+ + PL AK V ++NI Sbjct: 15 WVAEVLGWLMNGIYSIGVHNLGLCIIIFTLVIYAFMTPLQIKQQKFAKMNAVMAPELQNI 74 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 Q K R K Q+ +Q+ + +Y+ + ++P C +L+Q+P+FFA+Y+VI Sbjct: 75 QKK---YRGKKDQNSQLKMQEETMGVYEKYGVSPTGSCLQMLIQMPIFFALYQVI----- 126 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFG 478 ++ + G IKD+ A+ ++I + G Sbjct: 127 IKIPGYIGGIKDVFASAVSHITDVSG 152 >gi|260588821|ref|ZP_05854734.1| membrane protein OxaA [Blautia hansenii DSM 20583] gi|260540600|gb|EEX21169.1| membrane protein OxaA [Blautia hansenii DSM 20583] Length = 415 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 78/146 (53%), Gaps = 16/146 (10%) Query: 341 FIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPL-------AKKQYVSTANMKNI 392 ++A+ + LM+ Y++ V N G+ I++ T+ + PL AK V ++NI Sbjct: 6 WVAEVLGWLMNGIYSIGVHNLGLCIIIFTLVIYAFMTPLQIKQQKFAKMNAVMAPELQNI 65 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 Q K R K Q+ +Q+ + +Y+ + ++P C +L+Q+P+FFA+Y+VI Sbjct: 66 QKK---YRGKKDQNSQLKMQEETMGVYEKYGVSPTGSCLQMLIQMPIFFALYQVI----- 117 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFG 478 ++ + G IKD+ A+ ++I + G Sbjct: 118 IKIPGYIGGIKDVFASAVSHITDVSG 143 >gi|236585|gb|AAB19981.1| protein involved in thiophene and furan oxidation [Escherichia coli] Length = 439 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK-DLAAADPTNIFTLFGILPFY 483 PL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI+ A + + TL G+ + Sbjct: 242 QPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIQVKFAGVEHVGVHTLIGLFRYR 301 Query: 484 LPGFMHVGI 492 G +++ + Sbjct: 302 NRGGVYISV 310 >gi|332296958|ref|YP_004438880.1| 60 kDa inner membrane insertion protein [Treponema brennaborense DSM 12168] gi|332180061|gb|AEE15749.1| 60 kDa inner membrane insertion protein [Treponema brennaborense DSM 12168] Length = 901 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 19/211 (9%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREK 402 FML F + N GI+++ + V +L PL Q V K + P I ++ Sbjct: 21 FML---FNGVFKNAGISVIGVSFAVSILCLPLYIVAEHWQQVQRDIEKRLDPGISRIKAV 77 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 FK ++ + H I L + +L+QIP F A Y +S L + + +I Sbjct: 78 FKGDEQYMILSTFYKQNHYHPIMALRSSFGLLIQIPFFIAAYSFLS-KLPVLAGKNFLFI 136 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 KD+ A D LF I G + + PI M++ + + + + Sbjct: 137 KDMGAPD-----ALFSI------GTFPINVLPIAMTVINIVAGAIYTKGFKAKDKIQIYG 185 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M +VF+ L + P+GL++YW+ +N+ S+V+ Sbjct: 186 MALVFLVILYNSPSGLVLYWTMNNIFSLVKN 216 >gi|289549616|ref|YP_003470520.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] gi|289179148|gb|ADC86393.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] Length = 258 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 40/215 (18%) Query: 359 NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK- 413 N+G+AI++ V+L+ PL K+ +++ MK +QPKI+ +++K K + Q L+ Sbjct: 53 NYGLAIVIIVCLVRLILMPLMLHNQKQMAITSMKMKELQPKIEPIQQKMKAAATQQLKNE 112 Query: 414 ---AMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKVIS--ISLEMRHAPFWGWIKDL 465 + QLY+ H +NPL GC P+L+QIP+ F +Y + S + P + W Sbjct: 113 AYQELQQLYQQHQLNPLTTMFGCLPMLIQIPILFGLYATLKWPTSGGILSYPTFMWFH-- 170 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-- 523 P ++ + GFM+ F+Q +S K Q M+ M Sbjct: 171 -LTSPDSMIAMIA-------GFMY------------FVQSWLSARQMPKEQRMMGYVMMI 210 Query: 524 --PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P+ ++ P+ L +YW + N ++ QA+I Sbjct: 211 VSPLFILYIAFQSPSALALYW-FVNAALLILQAII 244 >gi|282934543|ref|ZP_06339795.1| putative membrane protein [Lactobacillus jensenii 208-1] gi|313471836|ref|ZP_07812328.1| membrane protein [Lactobacillus jensenii 1153] gi|281301381|gb|EFA93673.1| putative membrane protein [Lactobacillus jensenii 208-1] gi|313449008|gb|EEQ68251.2| membrane protein [Lactobacillus jensenii 1153] Length = 326 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 42/240 (17%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +G Y FI P+ +M N +G G AI + T ++ + PL +ST+ Sbjct: 44 FGLIYQFIGIPIRNIMLATENAIGGSNGAGWAIAIITAVIRFVLLPL----MLSTSKKST 99 Query: 392 IQ-PKIDELREKFKQ----------SPPQVLQKAMIQ--LYKTHNINPLAG--CWPILLQ 436 IQ K+ L+++FK +P + +Q + +Q +Y+ +N++ G C P+L+Q Sbjct: 100 IQQEKVSRLQDQFKLIQDALKDRSLTPDKQMQISQLQQKVYRENNLSITGGIGCLPLLVQ 159 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 P IY+ ++ S + + F+G ++ P+ +F + G L FYL Sbjct: 160 FPFMIGIYQAVAYSDALYKSNFFG----VSLGKPSLLFAIVGAL-FYLA----------- 203 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 SL M + A + I P++ +F S P L +Y+ +I+++QQ ++ Sbjct: 204 QSLLMLRGVSEQQRAAMQSTVFI---SPLMTLFISMSTPGALGLYFLVGGIIALIQQVIV 260 >gi|238854473|ref|ZP_04644812.1| preprotein translocase subunit YidC [Lactobacillus jensenii 269-3] gi|260665479|ref|ZP_05866326.1| preprotein translocase subunit YidC [Lactobacillus jensenii SJ-7A-US] gi|238832900|gb|EEQ25198.1| preprotein translocase subunit YidC [Lactobacillus jensenii 269-3] gi|260560747|gb|EEX26724.1| preprotein translocase subunit YidC [Lactobacillus jensenii SJ-7A-US] Length = 322 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 42/240 (17%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +G Y FI P+ +M N +G G AI + T ++ + PL +ST+ Sbjct: 40 FGLIYQFIGIPIRNIMLATENAIGGSNGAGWAIAIITAVIRFVLLPL----MLSTSKKST 95 Query: 392 IQ-PKIDELREKFKQ----------SPPQVLQKAMIQ--LYKTHNINPLAG--CWPILLQ 436 IQ K+ L+++FK +P + +Q + +Q +Y+ +N++ G C P+L+Q Sbjct: 96 IQQEKVSRLQDQFKLIQDALKDRSLTPDKQMQISQLQQKVYRENNLSITGGIGCLPLLVQ 155 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 P IY+ ++ S + + F+G ++ P+ +F + G L FYL Sbjct: 156 FPFMIGIYQAVAYSDALYKSNFFG----VSLGKPSLLFAIVGAL-FYLA----------- 199 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 SL M + A + I P++ +F S P L +Y+ +I+++QQ ++ Sbjct: 200 QSLLMLRGVSEQQRAAMQSTVFI---SPLMTLFISMSTPGALGLYFLVGGIIALIQQVIV 256 >gi|108802369|ref|YP_642566.1| putative inner membrane protein translocase component YidC [Mycobacterium sp. MCS] gi|119866062|ref|YP_936014.1| putative inner membrane protein translocase component YidC [Mycobacterium sp. KMS] gi|108772788|gb|ABG11510.1| 60 kDa inner membrane insertion protein [Mycobacterium sp. MCS] gi|119692151|gb|ABL89224.1| 60 kDa inner membrane insertion protein [Mycobacterium sp. KMS] Length = 367 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 6/114 (5%) Query: 339 FYFIAKPMFMLMSYFYNLVG--NF---GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +Y ++ M++ F L+G NF +++M ++ + + +Q +T M+ +Q Sbjct: 11 YYPVSAIMWVWYKAFAFLLGPDNFFAWALSVMFLVFTLRAILYKPFVRQIRTTRQMQELQ 70 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 P+I L++K+ + Q + M +L K H NP+ GC P+L QIPVF +Y V+ Sbjct: 71 PQIKALQKKYGKDR-QRMALEMQKLQKEHGFNPILGCLPMLAQIPVFLGLYHVL 123 >gi|332523606|ref|ZP_08399858.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus porcinus str. Jelinkova 176] gi|332314870|gb|EGJ27855.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus porcinus str. Jelinkova 176] Length = 297 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 30/225 (13%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKI 396 + KPM + YF N +G FG+AI++ T+ V+ + PL AKK + M ++P Sbjct: 29 LGKPMSHFIEYFANHMGLGFGLAIIIVTIIVRTIILPLGLYQAKKASYQSEKMAYLKPVF 88 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 D + ++ K + Q Q ++ K + IN L G C P+L+Q+P F A+Y + Sbjct: 89 DPINQRVKNATTQEEKFAAQSELMAAQKENGINMLGGMGCLPLLIQMPFFSAMYFAALHT 148 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + + F G DL + + I ++ ++ M+ Sbjct: 149 KGISTSHFLGI--DLGSKS-----------------LILTAIIAVLYFFQSWLSMQAVAE 189 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ MP++ +F + PAG+ +YW SI+QQ + Sbjct: 190 EQRAQMKTMMYTMPIMMIFMTMTLPAGVGLYWLVGGFFSIIQQLI 234 >gi|170052227|ref|XP_001862125.1| inner membrane protein oxa1-1, mitochondrial [Culex quinquefasciatus] gi|167873150|gb|EDS36533.1| inner membrane protein oxa1-1, mitochondrial [Culex quinquefasciatus] Length = 419 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 36/207 (17%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAM 415 I + TV V++L FPL + A M N +Q K+ E R+ + M Sbjct: 140 CIAIGTVCVRMLLFPLVIASQRNAAKMNNNMPQMQVLQMKMTEARQAGNAIDSARYAQEM 199 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIY----KVISISLEMRHAPFWGWIKDLAAADPT 471 +Q K ++NPL L Q P+F + + ++ ++ ++ W DL D Sbjct: 200 VQFMKEKDLNPLKNMLVPLAQAPIFISFFMGLRQMANVPVDSLREGGLFWFPDLTICDQ- 258 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MILNWMPV 525 FY PII S++MF+ +++ A A +L MP+ Sbjct: 259 ----------FY--------ALPIITSITMFLTIELGTDSARMSAANMQTVRYVLRAMPL 300 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQ 552 + +FP + +YW +SN S+VQ Sbjct: 301 FILPFTINFPGAICLYWVFSNFFSLVQ 327 >gi|167750238|ref|ZP_02422365.1| hypothetical protein EUBSIR_01212 [Eubacterium siraeum DSM 15702] gi|167656800|gb|EDS00930.1| hypothetical protein EUBSIR_01212 [Eubacterium siraeum DSM 15702] Length = 441 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 2/94 (2%) Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y L+ NFG AI++ TV VK+ PL KQ + A + PK+ E+++K++ + + Q Sbjct: 5 YLLLQNFGWAILIFTVIVKIAMLPLQIKQQKNMAFSQLFAPKVKEIQQKYRNNRDK--QA 62 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +Q + NP GC P++L + + F + V+ Sbjct: 63 EEMQKLQAQGYNPAGGCGPLILTMVILFGVIDVV 96 >gi|225377581|ref|ZP_03754802.1| hypothetical protein ROSEINA2194_03231 [Roseburia inulinivorans DSM 16841] gi|225210557|gb|EEG92911.1| hypothetical protein ROSEINA2194_03231 [Roseburia inulinivorans DSM 16841] Length = 425 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 9/114 (7%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW I M++LM + N G++I+L T+ + L FPL KQ + + + P++ Sbjct: 19 GW---IMNGMYILMEKVG--ITNVGLSIILFTIVIYALMFPLTYKQQKFSKLSQKMNPEL 73 Query: 397 DELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 +++K+K V +Q Q+Y+ + ++P C +L+Q+P+ A+Y+V Sbjct: 74 QAVQKKYKDKKDTVSMQNMQTETQQIYEKYGVSPTGSCVQMLIQMPLLLALYRV 127 >gi|227547696|ref|ZP_03977745.1| inner membrane protein translocase component YidC [Corynebacterium lipophiloflavum DSM 44291] gi|227080222|gb|EEI18185.1| inner membrane protein translocase component YidC [Corynebacterium lipophiloflavum DSM 44291] Length = 377 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 59/262 (22%), Positives = 117/262 (44%), Gaps = 54/262 (20%) Query: 345 PMFMLMSYFY-NLVGNFGI--------AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 P+ +M +++ L G FG+ +++L V +++L PL Y + + ++P+ Sbjct: 8 PVSAVMKFWHWLLAGVFGMESSNSWVASVVLLVVTIRVLIAPLQWYTYKTARVLVLMRPR 67 Query: 396 IDELREKF-KQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + + ++ + P+ +Q +A +L+K +N NPLAGC P L+QIP F +Y++ L Sbjct: 68 MAAIEAQYGDEITPENVQAHARARKELHKEYNYNPLAGCLPALIQIPFFLGLYRL----L 123 Query: 452 EMRHAPFWGWIKDLAAADPTNI-----FTLFGI-LPFYL----PGFMHVGIW-------- 493 P + L P + TL G+ LP Y+ F H+G Sbjct: 124 LWMAVPSSSDGRSLGVLSPAEVESFRETTLLGVPLPAYVSMTPEQFAHLGTTLADVRTLA 183 Query: 494 -PIIMSLSMFIQMKM-------------SPPPADKGQAMILNWMPVVFV-FALSSF---- 534 P++++ F + + A + A + +P+V + A++ Sbjct: 184 IPMLIAAVCFTTLNLVLSQIRSRSTLDWGSAVAHRSYAFVWALVPIVVLGLAIAGLTGLV 243 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 P L++YW N+++++Q V+ Sbjct: 244 PVALLLYWVSGNILTLIQTIVL 265 >gi|145221425|ref|YP_001132103.1| putative inner membrane protein translocase component YidC [Mycobacterium gilvum PYR-GCK] gi|145213911|gb|ABP43315.1| 60 kDa inner membrane insertion protein [Mycobacterium gilvum PYR-GCK] Length = 376 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 10/125 (8%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYN----LVG--NF---GIAIMLTTVFVKLLFFPLAKKQ 382 M +W FI P+ +M +Y L+G NF +++M ++ + + KQ Sbjct: 1 MSFNWMSLDFIYYPVSAIMWVWYKAFAFLLGPTNFFAWALSVMFLVFTLRAILYKPFVKQ 60 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L Q+PVF Sbjct: 61 IRTTRQMQELQPQIKALQKKYGKDR-QRMALEMQKLQREHGFNPILGCLPMLAQVPVFLG 119 Query: 443 IYKVI 447 +Y + Sbjct: 120 LYHTL 124 >gi|291556189|emb|CBL33306.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Eubacterium siraeum V10Sc8a] Length = 441 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 2/94 (2%) Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y L+ NFG AI++ TV VK+ PL KQ + A + PK+ E+++K++ + + Q Sbjct: 5 YLLLQNFGWAILIFTVIVKIAMLPLQIKQQKNMAFSQLFAPKVKEIQQKYRNNRDK--QA 62 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +Q + NP GC P++L + + F + V+ Sbjct: 63 EEMQKLQAQGYNPAGGCGPLVLTMVILFGVIDVV 96 >gi|125575428|gb|EAZ16712.1| hypothetical protein OsJ_32188 [Oryza sativa Japonica Group] Length = 413 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 22/218 (10%) Query: 349 LMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ Y + G N+ I L TV ++ PL Q +T + I+P+++ ++E+ Sbjct: 131 VIDYIHTFTGLNWWACIALATVLIRSATVPLLVNQLKATQKLNAIRPEMEAIKEEMNAMD 190 Query: 408 PQVLQKA---MIQLYKTHNINPLAGCWPILLQIPVF----FAIYKVISISLEMRHAPFWG 460 P+ ++ M L++ H ++P +L+Q P+F FAI +I M+ Sbjct: 191 PKSAKEGKAKMTALFQKHGVSPFTPLKGLLIQGPIFMSFFFAIRNMIDKVPSMKGGGSL- 249 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 W DL DP I + L F ++++ + +Q M P + Sbjct: 250 WFTDLTTPDPLYILPVLTALIF-------------LVTVELNLQEGMEGNPMARKMKNFS 296 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M V+ V SF G+ YW SN+ ++ VI + Sbjct: 297 RGMAVLTVPFTMSFAKGIFCYWITSNLFTLTYGFVIRR 334 >gi|229826869|ref|ZP_04452938.1| hypothetical protein GCWU000182_02253 [Abiotrophia defectiva ATCC 49176] gi|229788487|gb|EEP24601.1| hypothetical protein GCWU000182_02253 [Abiotrophia defectiva ATCC 49176] Length = 424 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 4/95 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + N I I+L T ++ L P+ KQ + P++ E+ +K+K Q+ M Sbjct: 39 IENAAICILLFTFIMRALMMPMYYKQQKVGKLTSRMTPELQEISKKYKGKRDMESQRKMQ 98 Query: 417 Q----LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 Q +Y+ + NPL+GC P+L+ +P+ F +Y+++ Sbjct: 99 QETQAVYEKYGSNPLSGCLPVLITLPIMFGLYRIV 133 >gi|225707022|gb|ACO09357.1| Inner membrane protein OXA1L, mitochondrial precursor [Osmerus mordax] Length = 421 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 31/208 (14%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQV-LQKAMIQL 418 AI++ TV ++L FP+ K A + N+ P++ +L K KQS + KA L Sbjct: 125 AIVIGTVLARMLVFPVIVKGQREAAKLNNVMPEMTKLTSKMNEAKQSGNKFDFAKAYADL 184 Query: 419 ---YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAA 468 K H++NPL G L Q PVF + + + +M + P W DL AA Sbjct: 185 TMFQKKHDVNPLRGFLVPLAQTPVFISFFIALR---KMSYHPVPSMQTGGLFWFTDLTAA 241 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + ILP + G M I+ L + P + + MP + + Sbjct: 242 DP------YFILPLAVTGTMF-----FILELGAESGIDN---PNMRAMKTVFRIMPFIIL 287 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 +FP + YW SN S+ Q A++ Sbjct: 288 PLTINFPTAVFTYWLTSNCFSLGQVALL 315 >gi|224142675|ref|XP_002324680.1| inner membrane protein [Populus trichocarpa] gi|222866114|gb|EEF03245.1| inner membrane protein [Populus trichocarpa] Length = 310 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 23/219 (10%) Query: 354 YNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ---SPPQ 409 +N G N+ +I++TT+ ++ PL Q +T+ + ++P ++E++++ ++ P Sbjct: 28 HNFTGFNWWASIVVTTLLIRSFTLPLLINQLKATSKLSIVRPHLEEVKQRVERQGMDPTA 87 Query: 410 VL--QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---WIKD 464 V QK M +L+K H ++P + +Q PVF + + I+ E + G W D Sbjct: 88 VSEGQKEMKKLFKEHGVSPFTPLKGLFIQAPVFISFFLAITNMAEKVPSFKSGGAFWFVD 147 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L AD IF + L F ++++ Q M PA + + Sbjct: 148 LTTADDLYIFPVLTALTF-------------LITVECNTQEGMEGNPAAGTMKNVSRALA 194 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 V SFP + YW SN+ S+ +++K G + Sbjct: 195 AASVPLTMSFPKAIFCYWITSNLFSLT-YGLVLKAPGVK 232 >gi|22122905|gb|AAM92288.1| putative cytochrome oxidase assembly protein [Oryza sativa Japonica Group] gi|78708924|gb|ABB47899.1| Inner membrane protein OXA1-like, mitochondrial precursor, putative, expressed [Oryza sativa Japonica Group] Length = 413 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 22/218 (10%) Query: 349 LMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ Y + G N+ I L TV ++ PL Q +T + I+P+++ ++E+ Sbjct: 131 VIDYIHTFTGLNWWACIALATVLIRSATVPLLVNQLKATQKLNAIRPEMEAIKEEMNAMD 190 Query: 408 PQVLQKA---MIQLYKTHNINPLAGCWPILLQIPVF----FAIYKVISISLEMRHAPFWG 460 P+ ++ M L++ H ++P +L+Q P+F FAI +I M+ Sbjct: 191 PKSAKEGKAKMTALFQKHGVSPFTPLKGLLIQGPIFMSFFFAIRNMIDKVPSMKGGGSL- 249 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 W DL DP I + L F ++++ + +Q M P + Sbjct: 250 WFTDLTTPDPLYILPVLTALIF-------------LVTVELNLQEGMEGNPMARKMKNFS 296 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M V+ V SF G+ YW SN+ ++ VI + Sbjct: 297 RGMAVLTVPFTMSFAKGIFCYWITSNLFTLTYGFVIRR 334 >gi|313890878|ref|ZP_07824502.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus pseudoporcinus SPIN 20026] gi|313120776|gb|EFR43891.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus pseudoporcinus SPIN 20026] Length = 309 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 30/225 (13%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNIQPKI 396 + KPM + YF N +G FG+AI++ T+ V+ + PL AKK + M ++P Sbjct: 41 LGKPMSHFIEYFANHMGLGFGLAIIIVTIIVRTIILPLGLYQAKKASYQSEKMAYLKPVF 100 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + + ++ K + Q Q ++ K + IN L G C P+L+Q+P F A+Y + Sbjct: 101 EPINQRMKNATSQEEKFAAQSELMAAQKENGINMLGGMGCLPLLIQMPFFSAMYFAALHT 160 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + + F G DL + + I I+ ++ M+ Sbjct: 161 KGISTSHFLGI--DLGSKS-----------------LILTAIIAILYFFQSWLSMQAVAE 201 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ MP++ +F + PAG+ +YW SI+QQ + Sbjct: 202 EQRAQMKTMMYTMPIMMIFMTMTLPAGVGLYWLVGGFFSIIQQLI 246 >gi|120407004|ref|YP_956833.1| putative inner membrane protein translocase component YidC [Mycobacterium vanbaalenii PYR-1] gi|119959822|gb|ABM16827.1| 60 kDa inner membrane insertion protein [Mycobacterium vanbaalenii PYR-1] Length = 374 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +++M ++ + + +Q +T M+ +QP+I L++K+ + Q + M +L + Sbjct: 47 LSVMFLVFTLRAILYKPFVRQIRTTRQMQELQPQIKALQKKYGKDR-QRMALEMQKLQRE 105 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 H NP+ GC P+L QIPVF +Y V+ Sbjct: 106 HGFNPILGCLPMLAQIPVFLGLYHVL 131 >gi|156401497|ref|XP_001639327.1| predicted protein [Nematostella vectensis] gi|156226455|gb|EDO47264.1| predicted protein [Nematostella vectensis] Length = 308 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 46/210 (21%), Positives = 93/210 (44%), Gaps = 35/210 (16%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ--SPPQVLQKA-----M 415 +I+ T+ + L FPL K + A + N++P+++E++ + + + + KA + Sbjct: 44 SIVAATIAFRTLMFPLIVKSQANAARLNNVKPELEEVQAQLRDLMNSNNAIGKAAASARL 103 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIY----KVISISLEMRHAPFWGWIKDLAAADPT 471 QLYK ++ +P+ L+Q+P+F + + ++ ++ +E W DL A DP Sbjct: 104 QQLYKDNDCHPIKSIIAPLVQVPLFISFFVGLRRMANLPVESFKEGGLFWFTDLTAYDPY 163 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-----PADKGQAMILNWMPVV 526 + PI+ SL+M +++ P + M V Sbjct: 164 FVL-------------------PIVCSLTMLASIELGGEAGVSNPQMQHMKTFFRVMCVA 204 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + + FPA + YW SN+ S+ Q +++ Sbjct: 205 MIPLTAQFPAAIFTYWVTSNLFSLGQVSLL 234 >gi|255579269|ref|XP_002530480.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis] gi|223529977|gb|EEF31903.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis] Length = 423 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 27/221 (12%) Query: 354 YNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS---PPQ 409 +NL G N+ +I+LTT+ ++ L PL Q +T+ + ++P+++E++++ + + P Sbjct: 152 HNLTGFNWWASIVLTTLVIRTLMVPLMINQLKATSKLTLMRPRLEEIKQQMQDTGMDPAT 211 Query: 410 VLQ--KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-----WI 462 + + K M L+K + ++P + +Q PVF + I E + P + W Sbjct: 212 IAEGNKQMKMLFKEYGVSPFTPMKGLFIQGPVFVCFFLAIRNMAE--NVPSFKNGGAFWF 269 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ D IF + L F++ ++ + +Q + P I Sbjct: 270 VDLSTPDSLYIFPVLTALTFWI-------------TIELNMQEGLEGNPVAGTMKNISRV 316 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + V FP + YW +N+ S V +K+HG + Sbjct: 317 FAALTVPLTMGFPKAIFCYWVTTNLFSFAYGGV-LKLHGVK 356 >gi|15828468|ref|NP_302731.1| inner membrane protein translocase component YidC [Mycobacterium leprae TN] gi|221230945|ref|YP_002504361.1| putative inner membrane protein translocase component YidC [Mycobacterium leprae Br4923] gi|38502903|sp|Q50205|OXAA_MYCLE RecName: Full=Membrane protein oxaA gi|13093898|emb|CAC32242.1| putative conserved membrane protein [Mycobacterium leprae] gi|219934052|emb|CAR72810.1| putative conserved membrane protein [Mycobacterium leprae Br4923] Length = 380 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + +++M ++ L + +Q +T M+ +QP+I L+ K+ + Q + M +L Sbjct: 41 WALSVMFLVFTLRALLYKPFVRQIRTTRQMQELQPRIRALQRKYGKDR-QRMALEMQKLQ 99 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVI 447 + H NP+ GC P+L QIPVF +Y + Sbjct: 100 REHGFNPILGCLPMLAQIPVFLGLYHAL 127 >gi|296395443|ref|YP_003660327.1| YidC/Oxa1 familymembrane protein insertase [Segniliparus rotundus DSM 44985] gi|296182590|gb|ADG99496.1| membrane protein insertase, YidC/Oxa1 family [Segniliparus rotundus DSM 44985] Length = 320 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 3/90 (3%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQL 418 + ++++ ++ L + A +Q M+ +QP++ ++ K+ K Q L+ M +L Sbjct: 32 WALSVVALVCTIRALLYAPAVRQIRFMRKMQELQPQMKAIQAKYGKDRQRQALE--MQKL 89 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 + H NPL GC P+LLQIPVF +Y V+S Sbjct: 90 QQEHGFNPLLGCLPMLLQIPVFIGLYHVLS 119 >gi|157114183|ref|XP_001652200.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes aegypti] gi|108877434|gb|EAT41659.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes aegypti] Length = 422 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 40/208 (19%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAMI 416 I + T+ V+L+ FPL + A M N +Q K+ E R+ + M+ Sbjct: 144 IAIGTICVRLVLFPLVIASQRNAAKMNNHMPQMQVLQMKMTEARQAGNSIDSARYAQEMV 203 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIY----KVISISLE-MRHAPFWGWIKDLAAADPT 471 K N+NPL L Q P+F + + ++ + +E MR + W DL D Sbjct: 204 AFMKEKNLNPLKNMLVPLAQAPIFISFFMGLRQMANTPVESMREGGLF-WFTDLTVCD-- 260 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-KGQAM-----ILNWMPV 525 FY PII S++MF+ +++ A Q M +L MP Sbjct: 261 ---------QFY--------ALPIITSITMFLTIELGTDSARMSAQNMQMVRYVLRAMP- 302 Query: 526 VFVFALS-SFPAGLIIYWSWSNVISIVQ 552 +F+F + +FP ++ YW+ SN S++Q Sbjct: 303 LFIFPFTINFPGAILCYWACSNFFSLLQ 330 >gi|300120462|emb|CBK20016.2| Oxa1 [Blastocystis hominis] Length = 441 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 33/184 (17%) Query: 387 ANMKNIQPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 A + IQP++++L E+ + S Q ++ M+ LYK ++P + + +QIPV Sbjct: 176 AKLAEIQPELNKLLERARLSQSMGMAADAQGMRDEMLSLYKNAGVSPFSPLFGAFIQIPV 235 Query: 440 FFAIYKVISISLEMRHAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 + + + E A G W +LAAADP Y + P++ Sbjct: 236 VISCFMGVRKLCETVPAVTTGGLSWFTNLAAADP------------YF-------VLPVV 276 Query: 497 MSLSMFIQMKMSPPPADK----GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 LS ++ + G ++ M + VF + PAGL YW+ +++++ Q Sbjct: 277 TGLSTLFMTELGADGMNGNGQVGMKYMMRGMSLFMVFIAAKLPAGLCFYWTVNSILACCQ 336 Query: 553 QAVI 556 I Sbjct: 337 TLAI 340 >gi|314935647|ref|ZP_07842999.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80] gi|313656212|gb|EFS19952.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80] Length = 280 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 38/249 (15%) Query: 337 GWFYFI-AKPM---FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTAN 388 G FY + KPM ++ + +N N+G+AI++ ++L+ PL K +V Sbjct: 28 GLFYTVFVKPMDDLLHVLGHAFN--ENYGLAIIVIVFILRLILMPLMCIQVKNIHVIRGK 85 Query: 389 MKNIQPKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINP---LAGCWPILLQIPVFF 441 + ++P+I++++EK K QSP + K +++ Y + INP L G +PIL+QIP+ Sbjct: 86 TEVVKPEINKIQEKIKEAQSPEERRAANKLLMKKYNEYGINPFKNLIGTFPILIQIPILL 145 Query: 442 AIYKVIS--ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y I S + P + W +L D I T+ + +++ ++ +P Sbjct: 146 GLYTSIKYPTSGGITQHPHFLWF-NLMHTDI--IMTIIAAVMYFIQPLVNSIHYPKNERR 202 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 S ++ M +S P+ +A + L +YW+ S I+Q Sbjct: 203 SYYVMMVLS---------------PLFITYASLHSASALSLYWAISATFLIIQMH-FAHS 246 Query: 560 HGAEIGLID 568 H A++G I+ Sbjct: 247 HYAKVGKIE 255 >gi|319936675|ref|ZP_08011088.1| membrane protein [Coprobacillus sp. 29_1] gi|319808232|gb|EFW04797.1| membrane protein [Coprobacillus sp. 29_1] Length = 286 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 115/237 (48%), Gaps = 17/237 (7%) Query: 334 IDWGWFYFIAK-PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +D G+F FI P+ + + +++GN ++ T+F+ +L P+ K VST M+ + Sbjct: 50 LDAGFFDFILTIPIAKGILFITDILGNVAWGVVGMTIFINILILPIMIKSTVSTQKMQML 109 Query: 393 QPKIDELREKF---KQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 QP++++++ K+ K Q+ Q A +Q LYK H+++ + + L +P+ A+++ + Sbjct: 110 QPELEKIQRKYAGRKDQASQMRQSAEMQALYKKHDVS-MFSSFTTFLTLPIMLAMWQSVQ 168 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + A F+G +L A + I + + Y+ VGI + I +K + Sbjct: 169 RIEILYQATFFGL--NLGATPMSQITSGNWV---YIIIVAIVGITQYLAIEINNIMLKRN 223 Query: 509 PPPADKGQAMILNWMPVVFV-----FALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P Q + M +V FAL S P + +YW +++++I++ I H Sbjct: 224 PRYKVSKQQKSMKTMNIVMTAMIVWFAL-SMPTAMSLYWITTSLVTIIRTVYIQIYH 279 >gi|190344393|gb|EDK36061.2| hypothetical protein PGUG_00159 [Meyerozyma guilliermondii ATCC 6260] Length = 361 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 52/233 (22%), Positives = 110/233 (47%), Gaps = 27/233 (11%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 M WG + + F+ +++ Y + +G I+ TV V+ + FPL K ++ A M Sbjct: 77 MAQGWGPTSLVER--FLELTHVYTGLPWWG-TIIAATVAVRAVMFPLYVKSSINAAKMTK 133 Query: 392 IQPKIDELREKFKQS--PPQVLQKAMIQ--LYKTHNINPLAGCWPILLQIPV----FFAI 443 ++P++D++ + +++ P + +Q A + L K H+I+ +P LLQ+P+ F A+ Sbjct: 134 VKPELDQIMKDLREAENPQEQVQAAHKRKALMKQHDIHMSHQMFP-LLQLPLAYGFFQAL 192 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 K+ + +E + + W +DL DP + GI +++ + Sbjct: 193 RKMANFPVEGFSSQGYAWFEDLTQVDPYCGLQVIA-----------AGIVVLMVRIGGET 241 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K ++ ++P+ +F F A +++Y++ +++ S VQ V+ Sbjct: 242 GAATMNPMLKK----VMTYVPIASIFITKEFSAAVVLYFAINSMASFVQALVL 290 >gi|146421675|ref|XP_001486782.1| hypothetical protein PGUG_00159 [Meyerozyma guilliermondii ATCC 6260] Length = 361 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 52/233 (22%), Positives = 110/233 (47%), Gaps = 27/233 (11%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 M WG + + F+ +++ Y + +G I+ TV V+ + FPL K ++ A M Sbjct: 77 MAQGWGPTSLVER--FLELTHVYTGLPWWG-TIIAATVAVRAVMFPLYVKSSINAAKMTK 133 Query: 392 IQPKIDELREKFKQS--PPQVLQKAMIQ--LYKTHNINPLAGCWPILLQIPV----FFAI 443 ++P++D++ + +++ P + +Q A + L K H+I+ +P LLQ+P+ F A+ Sbjct: 134 VKPELDQIMKDLREAENPQEQVQAAHKRKALMKQHDIHMSHQMFP-LLQLPLAYGFFQAL 192 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 K+ + +E + + W +DL DP + GI +++ + Sbjct: 193 RKMANFPVEGFSSQGYAWFEDLTQVDPYCGLQVIA-----------AGIVVLMVRIGGET 241 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K ++ ++P+ +F F A +++Y++ +++ S VQ V+ Sbjct: 242 GAATMNPMLKK----VMTYVPIASIFITKEFSAAVVLYFAINSMASFVQALVL 290 >gi|312865633|ref|ZP_07725857.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei F0415] gi|311098754|gb|EFQ56974.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei F0415] Length = 266 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 27/186 (14%) Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAG 429 V+L PL +Q S+ M+ +QP++ +++++ + + LQ A Q LYK + +N A Sbjct: 64 VRLALVPLYNRQMKSSREMQELQPELKRIQKEY--ADDRNLQYAKTQELYKENGVNQWAA 121 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 PIL+Q+PV A+Y+ + + F W +L D T I Sbjct: 122 FLPILIQLPVMMALYQALIRVPALSQGNFLIW--NLGKNDGTFIL--------------- 164 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYWSWSN 546 PI+ + F+ M +S + A + MP+ + + F +G+ +YW+ N Sbjct: 165 ----PILAAFFTFLSMWLSNKATKEKNAFMTATSIIMPLFIFWIGTRFTSGIALYWAIGN 220 Query: 547 VISIVQ 552 + Q Sbjct: 221 AFQVAQ 226 >gi|163915277|ref|NP_001106402.1| oxidase (cytochrome c) assembly 1-like [Xenopus (Silurana) tropicalis] gi|156230714|gb|AAI52066.1| LOC100127562 protein [Xenopus (Silurana) tropicalis] Length = 425 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 81/301 (26%), Positives = 127/301 (42%), Gaps = 58/301 (19%) Query: 283 ARYQAKFS--ANEITILP----GKSITTTNFLFAGAKEF-PTIHHYEKDLAIPRFEMLID 335 ARYQ+ + AN+ +LP S T N L E PT+ E L + L D Sbjct: 52 ARYQSTVTEVANQTPVLPEIQLQPSTTLDNVLPPPLVEAAPTVS--ETILPESVQQSLAD 109 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGI----AIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 G P+ ++ ++ L + G+ AI+ TV ++L FPL K A + N Sbjct: 110 LGLGG--QTPVGLIQNFLEFLNVDVGLPWWGAIVTGTVLARILVFPLIVKGQREAAKLNN 167 Query: 392 IQPKIDELREKF---KQSPPQV-LQKAM--IQLY-KTHNINPLAGCWPILLQIPVFFAIY 444 P+I + + KQS + KA + LY K H++NPL G L+Q P+F + + Sbjct: 168 HMPQISSMTNRMNEAKQSGNKFEFSKAYSDLTLYQKKHDVNPLRGFLVPLVQAPIFISFF 227 Query: 445 KVISISLEMRHAP--------FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 + +M + P W W DL AAD PFY I P+ Sbjct: 228 VALR---QMSYLPVPSMQSGGLW-WFTDLTAAD-----------PFY--------ILPLT 264 Query: 497 MSLSMFIQMKMSPP-----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +M+ +++ P K + MP++ + +FP + YW SNV S+ Sbjct: 265 VTCTMWGVLELGAESGVDNPNLKIMKTVFRVMPLIILPLTINFPTAVFTYWVTSNVFSLA 324 Query: 552 Q 552 Q Sbjct: 325 Q 325 >gi|197302264|ref|ZP_03167323.1| hypothetical protein RUMLAC_00991 [Ruminococcus lactaris ATCC 29176] gi|197298695|gb|EDY33236.1| hypothetical protein RUMLAC_00991 [Ruminococcus lactaris ATCC 29176] Length = 443 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 9/122 (7%) Query: 335 DWGWFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 DW IA + +M+ +N+ + N G+ I++ T+ V L PL KQ + Sbjct: 13 DWPIIKQIAWLLGQVMNGIFNVLSAIGIENIGVCIIIFTIIVYTLMIPLTIKQQKFSKMS 72 Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 +QP+I ++++K++ Q Q+ + +Y+ + + GC P+L+Q+P+ FA+Y Sbjct: 73 AVMQPEIKKIQKKYEGKKDQASMMKQQEEINMVYEKYGTSMSGGCLPMLIQMPILFALYP 132 Query: 446 VI 447 VI Sbjct: 133 VI 134 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 8/81 (9%) Query: 486 GFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNW------MPVVFVFALSSFPAG 537 G + + P++ L+ FI +K+ P ADK M + MP++ V + PAG Sbjct: 252 GVILAVLIPVLAGLTQFISVKLQPNAASADKDNPMAGSMNAMTYTMPLISVVMGFTLPAG 311 Query: 538 LIIYWSWSNVISIVQQAVIMK 558 L +YW+ S ++ +QQ I K Sbjct: 312 LGLYWAASAIVRCIQQLAINK 332 >gi|73662102|ref|YP_300883.1| preprotein translocase subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82593014|sp|Q49Z38|OXAA_STAS1 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|72494617|dbj|BAE17938.1| putative preprotein translocase subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 289 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 27/185 (14%) Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWP 432 K ++ MK +P ID ++EK K+S Q + A M+++YK +++NP+ GC P Sbjct: 79 KNSHMMREKMKVAKPDIDAIQEKVKRSRTQEEKMAANSEMMEVYKKYDMNPMKSMLGCLP 138 Query: 433 ILLQIPVFFAIYKVISI--SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 IL+Q+P+ ++ V+ S P++ W +LA D I + GIL F Sbjct: 139 ILIQMPIIMGLFFVLKYPSSGGFTEHPYFLWF-NLAKPD-IWITIIAGILYF-------- 188 Query: 491 GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 L ++ K P + M++ P++ V+ S + L +YWS S I Sbjct: 189 --------LQAYVSSKSMPAEQRQMGYMMMVISPIMIVWISFSSVSALGLYWSVSAAFLI 240 Query: 551 VQQAV 555 VQ V Sbjct: 241 VQTQV 245 >gi|228474645|ref|ZP_04059376.1| putative membrane protein [Staphylococcus hominis SK119] gi|228271308|gb|EEK12676.1| putative membrane protein [Staphylococcus hominis SK119] Length = 280 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 114/249 (45%), Gaps = 38/249 (15%) Query: 337 GWFYFI-AKPM---FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTAN 388 G FY + KPM ++ + +N N+G+AI++ ++L+ PL K +V Sbjct: 28 GLFYTVFVKPMDDLLHVLGHAFN--ENYGLAIIVIVFILRLILMPLMCIQVKNIHVIRGK 85 Query: 389 MKNIQPKIDELREKFK--QSPPQ--VLQKAMIQLYKTHNINP---LAGCWPILLQIPVFF 441 ++P+I++++EK K QSP + K +++ Y + INP L G +PIL+QIP+ Sbjct: 86 TDVVKPEINKIQEKIKEAQSPEERRAANKLLMKKYNEYGINPFKNLIGTFPILIQIPILL 145 Query: 442 AIYKVIS--ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y I S + P + W +L D I T+ + +++ ++ +P Sbjct: 146 GLYTSIKYPTSGGITQHPHFLWF-NLMHTDI--IMTIIAAVMYFIQPLVNSIHYPKNERR 202 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 S ++ M +S P+ +A + L +YW+ S I+Q Sbjct: 203 SYYVMMVLS---------------PLFITYASLHSASALSLYWAISATFLIIQMH-FAHS 246 Query: 560 HGAEIGLID 568 H A++G I+ Sbjct: 247 HYAKVGKIE 255 >gi|38234912|ref|NP_940679.1| putative inner membrane protein translocase component YidC [Corynebacterium diphtheriae NCTC 13129] gi|38201177|emb|CAE50901.1| Putative integral membrane protein [Corynebacterium diphtheriae] Length = 317 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+L T ++ L Q S M+ +QP + E+R+K+ +++++ +L K Sbjct: 34 LAIVLLTFTIRALLVKPMLNQMRSMRKMQELQPLMQEIRKKYPNDQQKLMEETR-KLQKE 92 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 +NP+AGC P+L+Q+PVF ++ V+ Sbjct: 93 MGVNPVAGCLPVLVQMPVFIGLFHVL 118 >gi|226362891|ref|YP_002780671.1| inner membrane protein translocase component YidC [Rhodococcus opacus B4] gi|226241378|dbj|BAH51726.1| putative OxaA family protein [Rhodococcus opacus B4] Length = 367 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 60/256 (23%) Query: 361 GIAIMLTTVFV-----KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 GI L+ VF+ +L+ P K Q +T M+ +QP+I L++K+ Q M Sbjct: 31 GITWALSVVFLVFTLRAVLYKPFVK-QVRTTRQMQELQPQIKALQKKYSGDR-QRQAVEM 88 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--------------------------- 448 +L K H NP+ GC P+L Q PVF ++ V+ Sbjct: 89 QKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVLRSFNRTGTGIGQLGMSVEANANTPNYFF 148 Query: 449 --------ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +S + AP WI A + F +G +P L + V P+++ S Sbjct: 149 SVEDVQSFLSARLFGAPISAWITMPKAQ--LDAFAAYGPIPTVL--NIAVVAVPLMIIAS 204 Query: 501 MFIQ-------MKMSPPPADKGQAMILNWMPVVFVFALSS------FPAGLIIYWSWSNV 547 + + SP A Q+ I+N + ++VF L P +++YW +N+ Sbjct: 205 IATHFNSRASVARQSPEAAANPQSAIMNKL-ALWVFPLGVLVGGPFLPIAILLYWVSNNI 263 Query: 548 ISIVQQAVIMKMHGAE 563 + QQ ++ + AE Sbjct: 264 WTYGQQHIVFRRIDAE 279 >gi|328882679|emb|CCA55918.1| membrane protein [Streptomyces venezuelae ATCC 10712] Length = 243 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 1/101 (0%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ V+L PL++ I P++ LR+K ++P + L+KA+++L+ Sbjct: 28 IVLFTMLVRLAIHPLSRASARGQKARTRIAPELAALRKKHAKNP-ERLKKAVLELHAREK 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 ++P AG P LLQ P F +Y + S H F + D Sbjct: 87 VSPFAGILPSLLQAPAFLLMYHLFSGDRMAGHTLFAAPLGD 127 >gi|218134371|ref|ZP_03463175.1| hypothetical protein BACPEC_02265 [Bacteroides pectinophilus ATCC 43243] gi|217989756|gb|EEC55767.1| hypothetical protein BACPEC_02265 [Bacteroides pectinophilus ATCC 43243] Length = 162 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 13/121 (10%) Query: 341 FIAKPMFMLMSYFYN-------LVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 FI P+ L+ Y N +G N G+AI++ T KLL PL KQ T Sbjct: 10 FIIGPVAKLLGYIMNWLFLGLDAIGIPNIGLAIIIFTFVTKLLMMPLTVKQMKFTKLSTV 69 Query: 392 IQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +QP++ +++K+K + Q +Q+ +Y + +P GC +L+Q P+ A+Y++I Sbjct: 70 MQPELQAIQKKYKNTKDQNEMLKMQEETKAVYAKYGTSPTGGCAQLLIQFPILLALYRII 129 Query: 448 S 448 Sbjct: 130 Q 130 >gi|218283269|ref|ZP_03489324.1| hypothetical protein EUBIFOR_01913 [Eubacterium biforme DSM 3989] gi|218215959|gb|EEC89497.1| hypothetical protein EUBIFOR_01913 [Eubacterium biforme DSM 3989] Length = 330 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 16/211 (7%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ--- 417 G+ I+LTT+ +++L F +K +ST M+ I P+I +++ K+K + + M Q Sbjct: 114 GVGIILTTLLIQMLVFVFTRKSQMSTQRMQEISPEIQKIQNKYKDKTDERSKMQMAQEMQ 173 Query: 418 -LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW-----------IKDL 465 LY+ ++I+P +Q+P+ +Y S+ + F G D+ Sbjct: 174 NLYQKYDIHPFGSMLITFIQLPIMMGMYYATMRSVSVVSGSFMGISLAGTPLDGFKALDI 233 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 A + +F I+ LP ++ + + P A+ M + +M Sbjct: 234 AYIAIYVLMVIFYIVSMKLPQWLKKWQDKKDNVKVKKYAQEETNPMAN-SMNMSMYFMTA 292 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + S+P + YW S+VI + Q ++ Sbjct: 293 MICIMYISWPMAMSFYWLVSSVIRVCQSLIL 323 >gi|257057913|ref|YP_003135745.1| preprotein translocase subunit YidC [Saccharomonospora viridis DSM 43017] gi|256587785|gb|ACU98918.1| preprotein translocase subunit YidC [Saccharomonospora viridis DSM 43017] Length = 346 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 36/226 (15%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAMIQL 418 + I+ T V+ L F Q S M++ P++ +++K+ +Q LQ+ L Sbjct: 34 LGIVFLTFTVRGLLFKPFVNQVRSMRKMQDFAPEVKRIQKKYANDRQRQAMELQR----L 89 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL-- 476 + H +NP C PILLQIPVF + V+ + ++ D+A+ IF + Sbjct: 90 QREHGVNPFGSCLPILLQIPVFIGLNWVLRNFRPGAESNYFFDADDVASYVDAQIFGINL 149 Query: 477 -------------------FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + + P +P + G I L+ + P + Q Sbjct: 150 GDAINHLGLAGGGGDSGWNWDVAPLAVPLMIVAG---IATHLTARHSVARQNPASATPQT 206 Query: 518 MILNWM-----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++N + P V + FP GL+IYW +NV ++ QQ + K Sbjct: 207 AVMNRLTLYVFPAGVVVFGAFFPIGLLIYWLANNVWTLGQQRFVYK 252 >gi|237784737|ref|YP_002905442.1| putative inner membrane protein translocase component YidC [Corynebacterium kroppenstedtii DSM 44385] gi|237757649|gb|ACR16899.1| putative membrane protein [Corynebacterium kroppenstedtii DSM 44385] Length = 447 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 4/89 (4%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI----QL 418 ++ L + V+L+ P A QY ST N++P I+++RE++K P +K I + Sbjct: 35 SLFLLVMTVRLILLPFAYAQYKSTRIQVNLRPVINQIREEYKDKPGTAARKERIAKEQKA 94 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVI 447 K AGC P+ +Q+P F +Y+V+ Sbjct: 95 RKDAGYRLSAGCLPVFIQLPFFLGLYRVL 123 >gi|195442310|ref|XP_002068901.1| GK18022 [Drosophila willistoni] gi|194164986|gb|EDW79887.1| GK18022 [Drosophila willistoni] Length = 469 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 40/213 (18%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAM 415 AI + T+ V+ L FPL ++A M N +Q K+ E R+ + M Sbjct: 158 AIAIGTLVVRTLIFPLVIVAQRNSAKMSNNMPQMQLLQLKMTEARQSGNAIESARYAQEM 217 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIY----KVISISLE-MRHAPFWGWIKDLAAADP 470 + + +NPL L Q P+F + + ++ + +E MR W W +DL ADP Sbjct: 218 MLFMREKGVNPLKNMVVPLAQAPLFISFFMGLRQMANAPVESMRDGGLW-WFQDLTLADP 276 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MILNWMP 524 FYL P+I S ++++ +++ A A +L +P Sbjct: 277 -----------FYL--------LPLITSATLYLTIEIGTDSARLSAANMNTMKYVLRALP 317 Query: 525 -VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V+F F ++ FP+ ++ YW+ SN IS+ Q A++ Sbjct: 318 LVIFPFTMN-FPSAILTYWACSNFISLGQVAIL 349 >gi|315446823|ref|YP_004079702.1| preprotein translocase subunit YidC [Mycobacterium sp. Spyr1] gi|315265126|gb|ADU01868.1| preprotein translocase subunit YidC [Mycobacterium sp. Spyr1] Length = 371 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 6/114 (5%) Query: 339 FYFIAKPMFMLMSYFYNLVG--NF---GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +Y ++ M++ F L+G NF +++M ++ + + KQ +T M+ +Q Sbjct: 7 YYPVSAIMWVWYKAFAFLLGPTNFFAWALSVMFLVFTLRAILYKPFVKQIRTTRQMQELQ 66 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 P+I L++K+ + Q + M +L + H NP+ GC P+L Q+PVF +Y + Sbjct: 67 PQIKALQKKYGKDR-QRMALEMQKLQREHGFNPILGCLPMLAQVPVFLGLYHTL 119 >gi|307128506|ref|YP_003880536.1| inner membrane protein YidC [Candidatus Sulcia muelleri CARI] gi|306482968|gb|ADM89838.1| inner membrane protein YidC [Candidatus Sulcia muelleri CARI] Length = 520 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 26/217 (11%) Query: 330 FEMLIDWGW--FYFIAKPMFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 FE LI +G +I + +F+ L S N+G+ I+L T+ VKL+ P+ QY Sbjct: 306 FENLIQFGGGVVKYINRYVFLYLFSILEKTNFNYGLIIILMTIIVKLIILPITYNQY--- 362 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAM--IQLYKTHNINPLAGCWPILLQIPVFFAIY 444 K++ + E F+ S + Q ++L K IN + ++QIP+F++++ Sbjct: 363 --------KLNSIIEIFRTSFDDINQNKFKNLKLDKKIVINSILYA---IIQIPIFYSLF 411 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + +R F WI +L D IF L +P Y H+ + I+ S+S+ I Sbjct: 412 NLFPTLINLRGKSFL-WIDNLTYYDS--IFNLKFNIPIYGN---HISLLTILYSISLLIL 465 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 K++ I M ++ + ++++ +GL +Y Sbjct: 466 RKINNSKYKTNNNSIY-IMSIIILLFINNYSSGLYLY 501 >gi|163840009|ref|YP_001624414.1| preprotein translocase YidC subunit [Renibacterium salmoninarum ATCC 33209] gi|162953485|gb|ABY23000.1| preprotein translocase YidC subunit [Renibacterium salmoninarum ATCC 33209] Length = 283 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/220 (21%), Positives = 98/220 (44%), Gaps = 23/220 (10%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI+ T+ V+ + P Q I P++ E++ K ++P Q+L + + LYK Sbjct: 62 GLAIIALTILVRTVLIPAGLSQVSGEIGRARIAPQLKEIQRKHAKNP-QLLSEKTMALYK 120 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP-----TNIFT 475 + ++ AG P LLQ PV +Y + ++ HA + + P ++ + Sbjct: 121 SEGVSMFAGIGPALLQAPVLMVVYGLFILAQIGGHANT--LLDQVFGGAPLGQSVVHLVS 178 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-----------SPPPADKGQ-AMILNWM 523 +LP G+++ G+ +I++++ + + + + PA G A IL W+ Sbjct: 179 TGSMLP---AGWVYAGVVAVILAVAEYNRSRALRLNAAGQDPSATQPAGTGTLARILPWL 235 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + FP +Y + V + V++A++ + G Sbjct: 236 SYITAVTALFFPLAAALYLMTTTVWTAVERAIMRRALGGS 275 >gi|171780265|ref|ZP_02921169.1| hypothetical protein STRINF_02053 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281613|gb|EDT47048.1| hypothetical protein STRINF_02053 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 249 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 29/209 (13%) Query: 359 NFGIAIMLTTVFVKLLFFPL-------AKKQYVSTANMKNIQPKIDE-LREKFKQSPPQV 410 FG+AI+L T+ V+ + PL A Q A +K I I+E +R Q Sbjct: 4 GFGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYLKPIFAPINERMRNATTQEEKLA 63 Query: 411 LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q ++ K + IN L G C P+L+Q+P F A+Y + + + F G DL + Sbjct: 64 AQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAAQYTQGVSGSTFLGI--DLGSR 121 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 + + IL F+ W +S+ + + + A KG + MP++ V Sbjct: 122 S-MPLTAVIAILYFFQS-------W---LSMQAVAEEQRA---AMKGTMYV---MPLMMV 164 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIM 557 F S PA +++YW SI+QQ + M Sbjct: 165 FFGMSMPASVLLYWLVGGFFSIIQQLITM 193 >gi|296139617|ref|YP_003646860.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella paurometabola DSM 20162] gi|296027751|gb|ADG78521.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella paurometabola DSM 20162] Length = 287 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 12/113 (10%) Query: 345 PMFMLMSYFYNLVGNF-----GIAIMLTTVFV-----KLLFFPLAKKQYVSTANMKNIQP 394 P+ L+ ++ + G F G A L+ VF+ +L +P + ++ ++P Sbjct: 8 PISALLWLWHRVFGAFLGADNGFAWALSVVFLVFTVRAVLLWP-GLVSARAGRRLERMRP 66 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++D+LR K + P Q L +L + H + PL GC P L QIPVFF +Y V+ Sbjct: 67 ELDKLRRKHGKDP-QKLALETQKLQREHGVRPLLGCLPALAQIPVFFGLYHVL 118 >gi|158294169|ref|XP_315429.4| AGAP005421-PA [Anopheles gambiae str. PEST] gi|157015441|gb|EAA11925.4| AGAP005421-PA [Anopheles gambiae str. PEST] Length = 419 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 85/211 (40%), Gaps = 44/211 (20%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQKAM 415 I + TV V+ L FPL + A M N P++ L+ K ++ + M Sbjct: 139 CIAIGTVCVRTLLFPLVIASQRNAAKMNNYMPQLQVLQMKMTEARQAGNAIDSARYGQEM 198 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAA 468 + K N+NPL L Q P+F + + + EM + P W DL Sbjct: 199 VLFMKEKNLNPLKNMLVPLAQAPIFISFFMGLR---EMANTPVESMRDGGLFWFTDLTIC 255 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MILNW 522 D FY PII SL++F +++ A A IL Sbjct: 256 DQ-----------FY--------ALPIITSLTLFATIELGTDSARMSAANMQTAKYILRA 296 Query: 523 MPVVFVFALS-SFPAGLIIYWSWSNVISIVQ 552 +P+ F+F + +FP ++ YW+ SN S+VQ Sbjct: 297 LPL-FIFPFTINFPGAILCYWACSNFFSLVQ 326 >gi|323356507|ref|YP_004222903.1| preprotein translocase subunit YidC [Microbacterium testaceum StLB037] gi|323272878|dbj|BAJ73023.1| preprotein translocase subunit YidC [Microbacterium testaceum StLB037] Length = 270 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 +L P+ Q + + P++ L+E+++++P + LQ+ +QLY+ N +P AGC Sbjct: 75 RLALIPVGVSQARAEQTRARLAPRLRVLQERWRKNP-ERLQRETMQLYRDENTSPAAGCL 133 Query: 432 PILLQIPVFFAIYKV 446 P+L Q PV +Y V Sbjct: 134 PLLAQAPVVGLLYAV 148 >gi|302672310|ref|YP_003832270.1| membrane insertion protein [Butyrivibrio proteoclasticus B316] gi|302396783|gb|ADL35688.1| membrane insertion protein [Butyrivibrio proteoclasticus B316] Length = 436 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 9/124 (7%) Query: 355 NLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ--- 409 N +G N G+AI++ T+ + L PL KQ + + P++ +++K+K Sbjct: 33 NTIGIPNIGLAIIIFTIVIYLCLLPLTYKQQKFSKLQAKMSPELKAIQDKYKGKKDNDSM 92 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---ISLEMRHAPFWGWIKDL 465 +Q +LY + ++ C +++Q+P+ FA+Y+VIS + + F+ +++L Sbjct: 93 LAMQAETKELYAKYGVSQTGSCLQLIIQMPILFALYRVISNIPAYVTIVRNAFYPLVEEL 152 Query: 466 AAAD 469 AD Sbjct: 153 RTAD 156 >gi|167624619|ref|YP_001674913.1| 60 kDa inner membrane insertion protein [Shewanella halifaxensis HAW-EB4] gi|167354641|gb|ABZ77254.1| 60 kDa inner membrane insertion protein [Shewanella halifaxensis HAW-EB4] Length = 219 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 31/204 (15%) Query: 361 GIAIMLTTVFVKLLFFPLAKK----QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 G+AI+L T+ V+LLF P++ Y + M I+P++D+L+ +K P ++ ++ M Sbjct: 27 GVAIILLTLVVRLLFSPISCSAMINSYKNKKTMAAIKPELDKLKSVYKDKPNEMAKQTM- 85 Query: 417 QLYKTHNINPLAGCWP--ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LY+ H+I ++ + Q F +++V+ ++ + + WI ++A D + Sbjct: 86 ALYRKHDIKFISKTLVANVSSQAIFGFGMFQVLQKAI---FSSKFAWISNIAKPD-IALA 141 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 L G L + + M M P A++ A+ L +V V L + Sbjct: 142 MLVGALTY--------------------LSMLMMPDSAEQANALFLLIPAMVSVAVLVTA 181 Query: 535 PAGLIIYWSWSNVISIVQQAVIMK 558 P+ L +YW+ S+ +Q V+ K Sbjct: 182 PSALSLYWATSSAFGALQSLVVNK 205 >gi|154496118|ref|ZP_02034814.1| hypothetical protein BACCAP_00402 [Bacteroides capillosus ATCC 29799] gi|150274673|gb|EDN01737.1| hypothetical protein BACCAP_00402 [Bacteroides capillosus ATCC 29799] Length = 474 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/287 (22%), Positives = 118/287 (41%), Gaps = 75/287 (26%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P ++ FY L N+GIA++L V VK++ FPL+ K S M + ++ +L++ + Sbjct: 10 PFVWVLMLFYELFDNYGIALILFAVLVKVILFPLSIKAKRSMIQMNMLNGQMQKLQKMYG 69 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL------------E 452 + + + +LY+ +NP+ GC +L + + +Y +I L E Sbjct: 70 NNRDK-YNLEVQKLYEKEKVNPMGGCLWSMLPLVILLPLYAIIRQPLTYLMNLTPDVISE 128 Query: 453 MRHAPFW-------GWIKDLAAAD----------------PTNI--------------FT 475 + W GWIK+ AAD P NI F Sbjct: 129 VARVVDWNNAAVSAGWIKE--AADFANVGYNQLYLASLITPENIGAVQAVAEGARVINFN 186 Query: 476 LFGILPFYLP----------GFMHVGIW--PIIMSLS----MFIQMKMSP-------PPA 512 G+ +P + H+G++ PI+ + S I MK + A Sbjct: 187 FLGLNLAQMPQWQFWTWSSVDWAHIGLFLMPIVSAGSGLLFSLIMMKTNAVNQQSRNAAA 246 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + +L P++ ++ + PAGL +YW NV+S++Q+ + K+ Sbjct: 247 NSTNKTMLIISPLMSLWIGFAMPAGLSVYWISQNVLSMLQEFLAGKL 293 >gi|324999878|ref|ZP_08120990.1| preprotein translocase subunit YidC [Pseudonocardia sp. P1] Length = 388 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 10/116 (8%) Query: 341 FIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFV----KLLFFPLAKKQYVSTANMKN 391 FI P+ +M ++ + G + G A L+ VF+ +L+ + Q S M+ Sbjct: 4 FIYYPVSFIMWVWHKVFGFVLGEDSGFAWALSVVFLVFTLRLILYKPFVTQVRSMRKMQE 63 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + P++ +LR+K+ Q L M +L + + NPL GC PIL+QIPVF ++ V+ Sbjct: 64 MAPEMQKLRKKYANDR-QKLATEMQKLQQQNGANPLMGCLPILVQIPVFIGLFHVL 118 >gi|257462451|ref|ZP_05626864.1| inner membrane protein [Fusobacterium sp. D12] gi|317060110|ref|ZP_07924595.1| inner membrane protein YIDC [Fusobacterium sp. D12] gi|313685786|gb|EFS22621.1| inner membrane protein YIDC [Fusobacterium sp. D12] Length = 125 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 21/137 (15%) Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 H +NP GC P+++Q+P+ FA++ V+ + + F W+ +L DP Sbjct: 7 HKVNPAGGCLPLIIQLPILFALFGVLRGGIIPEDSKFL-WL-ELTKPDP----------- 53 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 FY I+P++ F Q K+ + ++ P++ +F P GL +Y Sbjct: 54 FY--------IFPLLNGAVSFFQQKLMGNSDNPQMKNMMYMFPIMMIFISYKMPGGLQLY 105 Query: 542 WSWSNVISIVQQAVIMK 558 W S++ +++QQ IMK Sbjct: 106 WLTSSLTAVLQQYFIMK 122 >gi|225620984|ref|YP_002722242.1| inner membrane protein [Brachyspira hyodysenteriae WA1] gi|225215804|gb|ACN84538.1| inner membrane protein [Brachyspira hyodysenteriae WA1] Length = 900 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 102/220 (46%), Gaps = 22/220 (10%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL---AKKQYVSTANMKN-IQPKI 396 FI + +F L +NL ++ +I L ++ + L PL A+K N++N ++P I Sbjct: 17 FIIETLFFLFKNIFNL--SYSTSIFLLSLSINFLSLPLYNIAEKWQEKERNIQNKMKPII 74 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 D ++ +K +L + ++ I G +L+QIP F A Y I ++ Sbjct: 75 DNIKAVYKGDQRYLLIRTCHRINGYKIIYAFRGVLGLLIQIPFFIAAYNFIYSLSDLSQG 134 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + +IKD + P N+ +LPF + F S+ M S + K + Sbjct: 135 NLF-FIKDFSK--PDNLINGINLLPFTMTIF------------SILAGMVYSKKLSIK-E 178 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +M L ++F+ L + P+GL+ YW+ + + S+++ V+ Sbjct: 179 SMPLYITSLIFLIILYNSPSGLLFYWNINCLFSLIKNIVL 218 >gi|293336635|ref|NP_001168896.1| hypothetical protein LOC100382702 [Zea mays] gi|223973535|gb|ACN30955.1| unknown [Zea mays] Length = 423 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 21/207 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA---M 415 N+ + I LTT +++ PL Q +T ++ I P+++ ++++ P+ +Q+ M Sbjct: 152 NWWVCIALTTFIIRIATVPLLVNQLKATTKLRAINPEMEVIKDQMNSMDPKSVQEGQAKM 211 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG----WIKDLAAADPT 471 L+K H ++PL +L+Q P+F + + IS +E + F G W DL D Sbjct: 212 KALFKKHGVSPLTPMKGLLIQGPIFMSFFFAISNMVE-KVPSFKGGGTLWFTDLTTPDSL 270 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 I + L F + ++ + +Q M P + V+ V Sbjct: 271 YILPMLTGLTF-------------LATVELNLQEGMEGNPMAGKMKYFSRGVAVLTVPFT 317 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 +F + YW+ SN+ +++ VI + Sbjct: 318 MNFATAVFCYWTSSNIFTLLYGLVIRR 344 >gi|224477730|ref|YP_002635336.1| putative lipoprotein [Staphylococcus carnosus subsp. carnosus TM300] gi|222422337|emb|CAL29151.1| putative lipoprotein precursor [Staphylococcus carnosus subsp. carnosus TM300] Length = 287 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 72/121 (59%), Gaps = 13/121 (10%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI-- 392 G+FY AKPM L+ + N +G ++G+AI++ + ++L+ P Q + M+ + Sbjct: 29 GFFYNTFAKPMDHLLHWLGNNLGHDYGLAIIIIVLAIRLVMLPFMLSQTKNGQMMRKVMD 88 Query: 393 --QPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFFAI 443 +P+++ ++EK K++ Q + A M+++YK + +NP+ GC PIL+Q+P+ F + Sbjct: 89 FAKPEMNAVQEKVKRARTQEEKMAANQEMMEVYKKYELNPMKSMLGCLPILIQMPILFGL 148 Query: 444 Y 444 Y Sbjct: 149 Y 149 >gi|134103814|ref|YP_001109475.1| putative inner membrane protein translocase component YidC [Saccharopolyspora erythraea NRRL 2338] gi|291005728|ref|ZP_06563701.1| putative inner membrane protein translocase component YidC [Saccharopolyspora erythraea NRRL 2338] gi|133916437|emb|CAM06550.1| preprotein translocase YidC subunit [Saccharopolyspora erythraea NRRL 2338] Length = 336 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 12/118 (10%) Query: 341 FIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFV-----KLLFFPLAKKQYVSTANMK 390 FI P+ ++ +++ + G G A L+ VF+ LLF P Q S M+ Sbjct: 4 FIYYPVSAILWFWHEVFGFVLDPASGFAWALSVVFLVFTLRALLFKPFVH-QVRSMKKMQ 62 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P I L+EK+ ++ Q+ M +L H NP++GC P+L+Q+PVF ++ V++ Sbjct: 63 EFAPHIKALQEKYGDDRQKMAQE-MQKLQAEHGFNPVSGCLPMLVQVPVFIGLFHVLN 119 >gi|241999556|ref|XP_002434421.1| cytochrome oxidase biogenesis protein, putative [Ixodes scapularis] gi|215497751|gb|EEC07245.1| cytochrome oxidase biogenesis protein, putative [Ixodes scapularis] Length = 426 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/212 (26%), Positives = 89/212 (41%), Gaps = 42/212 (19%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL-------QKAMI 416 I L TV VKLL FP K +T +M N P++ L+ K ++ V ++ Sbjct: 148 IALGTVVVKLLVFPAILKGQKNTIHMNNHLPQMQVLQAKLSEARSSVFVLDSARYANELM 207 Query: 417 QLYKTHNINPLAGCWPILLQIPV----FFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 K INPL ++Q PV FFA+ + ++ +E W DL DP Sbjct: 208 LFMKEKQINPLKNMIIPMVQAPVFISFFFALRGMANLPMESFKTGGMLWFTDLTIPDP-- 265 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMILNW-------MP 524 + +LP I + LS + + A+ G +A L W MP Sbjct: 266 ----YCLLPL------------ITIRLSRVVALG-----AESGVRADNLQWTRYVFRAMP 304 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +V +FPA L+ YW+ SN+ ++ Q ++ Sbjct: 305 IVIFPFTMNFPAALLCYWATSNMFTLAQVGLL 336 >gi|282850778|ref|ZP_06260153.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus gasseri 224-1] gi|282558186|gb|EFB63773.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus gasseri 224-1] Length = 166 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 18/140 (12%) Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK INP GC P+L+Q+PV +A+Y+ I + ++++ F W+ DL DP + Sbjct: 1 LYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTPQLQNGRFL-WM-DLGRPDP------Y 52 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPA 536 I+P F + S +I +P + G + + MP++ + + Sbjct: 53 YIMPVLAAAFTFI---------STYISQMSTPQSSQNGMTKGMTYLMPLIIGVSAIGIQS 103 Query: 537 GLIIYWSWSNVISIVQQAVI 556 + +YW SN+ +VQ ++ Sbjct: 104 AISLYWVISNLFQVVQTFIL 123 >gi|195376879|ref|XP_002047220.1| GJ13319 [Drosophila virilis] gi|194154378|gb|EDW69562.1| GJ13319 [Drosophila virilis] Length = 447 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 38/211 (18%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAMI 416 I + T+ V+ L FPL ++A M N +Q K+ E R+ + M+ Sbjct: 162 IAIGTIVVRTLIFPLVILAQRNSAKMSNNMPQMQVLQLKMTEARQSGNAIESARYAQEMM 221 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIY----KVISISLE-MRHAPFWGWIKDLAAADPT 471 K +NPL L Q P+F + + ++ + +E MR + W DL ADP Sbjct: 222 LFMKEKGVNPLKNMIVPLAQAPLFLSFFMGLRQMANTPVESMRDGGLF-WFTDLTLADP- 279 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MILNWMPV 525 FYL P+I S ++++ +++ A A +L +P+ Sbjct: 280 ----------FYL--------LPVITSATLYLTIELGTDSARLSAANMNTMKYVLRALPI 321 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V +FPA ++ YW+ SN IS+ Q AV+ Sbjct: 322 VIFPFTMNFPAAILTYWACSNFISLGQVAVL 352 >gi|229491230|ref|ZP_04385058.1| putative membrane protein [Rhodococcus erythropolis SK121] gi|229321968|gb|EEN87761.1| putative membrane protein [Rhodococcus erythropolis SK121] Length = 368 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%) Query: 361 GIAIMLTTVFV-----KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 GIA L+ VF+ +L+ P K Q +T M+ +QP+I L++K+ Q M Sbjct: 29 GIAWALSVVFLVFTLRAVLYKPFVK-QVRTTRQMQELQPQIKALQKKYSGDR-QRQAVEM 86 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +L K H NP+ GC P+L Q PVF ++ V+ Sbjct: 87 QKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVL 118 >gi|226309516|ref|YP_002769478.1| OxaA family protein [Rhodococcus erythropolis PR4] gi|226188635|dbj|BAH36739.1| putative OxaA family protein [Rhodococcus erythropolis PR4] Length = 368 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%) Query: 361 GIAIMLTTVFV-----KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 GIA L+ VF+ +L+ P K Q +T M+ +QP+I L++K+ Q M Sbjct: 29 GIAWALSVVFLVFTLRAVLYKPFVK-QVRTTRQMQELQPQIKALQKKYSGDR-QRQAVEM 86 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +L K H NP+ GC P+L Q PVF ++ V+ Sbjct: 87 QKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVL 118 >gi|223983638|ref|ZP_03633816.1| hypothetical protein HOLDEFILI_01097 [Holdemania filiformis DSM 12042] gi|223964405|gb|EEF68739.1| hypothetical protein HOLDEFILI_01097 [Holdemania filiformis DSM 12042] Length = 289 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 32/240 (13%) Query: 332 MLIDWGWF-YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 M+ + WF F P+ L+++ VG +++ + T+ V L+ K V T M+ Sbjct: 47 MMANENWFNAFFVFPLAKLVNFLTPYVG-VALSVSIVTLLVHLITLVFTIKSTVMTQKMQ 105 Query: 391 NIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 IQP+++ + +K++ + Q A M +LYK + INP +Q+P+ A+Y Sbjct: 106 VIQPEMNRITKKYEGKTDERSQMAQAQEMQRLYKENGINPFGAIISSFIQLPIIMAVYMS 165 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP---FYLPGFMHVGIWPI-IMSLSMF 502 + + + + WG L+ + L G++ YL F+ + I I M L F Sbjct: 166 VQRAESVVNGTMWG----LSLKET----PLHGVMSGQWLYLVLFVFMAICQIGSMMLPQF 217 Query: 503 IQMKMSPPPA-----------DKGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISI 550 + + + A G M++ M VF+ +S ++PA + IYW+ S+++ I Sbjct: 218 LATQKAKKEAAAHHKKYEKTKQPGGNMMIYMM--VFILVISVNWPAAMTIYWAVSSLVMI 275 >gi|227549433|ref|ZP_03979482.1| inner membrane protein translocase component YidC [Corynebacterium lipophiloflavum DSM 44291] gi|227078510|gb|EEI16473.1| inner membrane protein translocase component YidC [Corynebacterium lipophiloflavum DSM 44291] Length = 325 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 10/116 (8%) Query: 341 FIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVF----VKLLFFPLAKKQYVSTANMKN 391 FI P+ ++ +++ + G + GIA +L VF +++L Q S M+ Sbjct: 4 FIYWPISAVLWFWHKIFGFIFAPDSGIAWILAIVFLTFTIRVLLVKPMVNQMRSMRRMQE 63 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +QPK+ E+R K+K ++ Q+ +LYK NPLA C L+Q+PVF ++ V+ Sbjct: 64 MQPKMQEIRAKYKGDQQKMAQETQ-KLYKEMGTNPLASCIVPLVQMPVFIGLFHVL 118 >gi|322778978|gb|EFZ09389.1| hypothetical protein SINV_15992 [Solenopsis invicta] Length = 279 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 34/208 (16%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQKA 414 + I+ TV + L FPL + + N P I E+ ++ ++ Sbjct: 55 LTIVTATVCARALIFPLVINSQKNMIKVTNHMPVIQEMHQRLTEARNSGDHMESAKAATE 114 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVF----FAIYKVISISLEMRHAPFWGWIKDLAAADP 470 M+Q K +N++ L+Q PVF FA+ K+ ++ +E + W+KDL D Sbjct: 115 MMQYMKKNNVSMTKNFMAPLIQAPVFISFFFALKKMANLPVESLKEGGFLWVKDLTVYD- 173 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-KGQAM---ILNWMPVV 526 P+Y I PI+ S++MFI +++ A+ M +L +P + Sbjct: 174 ----------PYY--------IMPIVTSVTMFITIELGTDGANIHAMGMFRYVLRAVPFI 215 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQA 554 + + FP ++ YW +N +S++Q A Sbjct: 216 ALPFMLHFPGTILTYWVATNTVSLLQTA 243 >gi|224087219|ref|XP_002308102.1| inner membrane protein [Populus trichocarpa] gi|222854078|gb|EEE91625.1| inner membrane protein [Populus trichocarpa] Length = 427 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 23/219 (10%) Query: 354 YNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---QSPPQ 409 +N G N+ ++++TT+ ++ PL Q +T+ + ++P ++E++++ P Sbjct: 135 HNFTGLNWWASMVVTTLLIRSAMLPLLINQLKATSKLSILRPHLEEVKQRVDCQVMDPTA 194 Query: 410 VL--QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---WIKD 464 V QK M +L+K H ++P I +Q PVF + + IS E + G W D Sbjct: 195 VSEGQKEMQKLFKEHGVSPFTPLKGIFIQGPVFISFFLAISNMAEKVPSFKSGGAYWFVD 254 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L D IF + L F ++++ Q M PA + + Sbjct: 255 LTTPDGLYIFPVLTALTF-------------LLTVECNTQEGMEGNPAAGTMKNVSRALA 301 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 V V +FP + YW SN+ S+ +++K G + Sbjct: 302 VASVPLTMNFPKAVFCYWVTSNLFSLA-YGLVLKAPGVK 339 >gi|237752890|ref|ZP_04583370.1| inner membrane protein oxaA [Helicobacter winghamensis ATCC BAA-430] gi|229375157|gb|EEO25248.1| inner membrane protein oxaA [Helicobacter winghamensis ATCC BAA-430] Length = 99 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 20/99 (20%) Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI DL+ DP + PI+M +M++Q ++P D Q I Sbjct: 3 WITDLSVMDPYFVL-------------------PILMGATMYLQQHLTPTAFNDPMQEKI 43 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++P++F +FP+GL++YW +N+ SI+QQ +I K Sbjct: 44 FKFLPLIFTIFFVTFPSGLVLYWFVNNIFSILQQLLINK 82 >gi|198465469|ref|XP_001353642.2| GA19566 [Drosophila pseudoobscura pseudoobscura] gi|198150173|gb|EAL31156.2| GA19566 [Drosophila pseudoobscura pseudoobscura] Length = 438 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 28/207 (13%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAM 415 AI + T+ V+ + FPL ++A M N +Q K+ E R+ + M Sbjct: 153 AIAVGTLVVRTIIFPLVILAQRNSAKMNNNMPQMQLLQLKMTEARQSGNAIESARYAQEM 212 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIY----KVISISLE-MRHAPFWGWIKDLAAADP 470 + + +NPL L Q P+F + + ++ + ++ MR W W +DL ADP Sbjct: 213 MLFMRDKGVNPLKNMIVPLAQAPLFISFFMGLRQMANTPVDSMRDGGLW-WFQDLTLADP 271 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP-VVFVF 529 I L YL + +G +S + MK +L +P V+F F Sbjct: 272 FYILPLITSATLYL--TIEIGTDSARLSAANMNTMKY-----------VLRALPLVIFPF 318 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ FPA ++ YW+ SN IS+ Q AV+ Sbjct: 319 TMN-FPAAILTYWACSNFISLGQVAVL 344 >gi|886322|gb|AAB53138.1| ORF312; L222-ORF13; similar to C-terminal 60 kda inner membrane proteins of E. coli and Pseudomonas putida; putative [Mycobacterium leprae] Length = 312 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 +++M ++ L + +Q +T ++ +QP+I L+ K+ + Q + M +L + Sbjct: 42 ALSVMFLVFTLRALLYKPFVRQIRTTRQIEELQPRIRALQRKYGKDR-QRMALEMQKLQR 100 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVI 447 H NP+ GC P+L QIPVF +Y + Sbjct: 101 EHGFNPILGCLPMLAQIPVFLGLYHAL 127 >gi|255528515|ref|ZP_05395299.1| 60 kDa inner membrane insertion protein [Clostridium carboxidivorans P7] gi|255507797|gb|EET84253.1| 60 kDa inner membrane insertion protein [Clostridium carboxidivorans P7] Length = 217 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 54/99 (54%), Gaps = 2/99 (2%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++S +N G++GI+I+ T+ V+++ P + KQ N + I KI +++ K+K + Sbjct: 11 ILSSIFNFTGDWGISIIFLTILVRIILIPFSIKQKSEMYNQQRISQKIQDIKSKYKNNEK 70 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++ ++ + Y+ GC +Q+P+ F +Y V+ Sbjct: 71 RIKEETI--KYEQQLAKSTLGCLVTFIQLPILFTLYNVV 107 >gi|146321574|ref|YP_001201285.1| preprotein translocase subunit YidC [Streptococcus suis 98HAH33] gi|145692380|gb|ABP92885.1| Preprotein translocase subunit YidC [Streptococcus suis 98HAH33] Length = 277 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 20/133 (15%) Query: 336 WGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMK 390 W W + +PM L+ +F + FG+AI++ T+ V+ + PL K + + M Sbjct: 59 WDW---LGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMN 115 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPLAG--CWPILLQIPVFFAIY 444 ++P + ++E+ K + Q Q A Q Y K + ++ L G C P+L+Q+P F AIY Sbjct: 116 YLKPILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIY 175 Query: 445 KVISISLEMRHAP 457 RH P Sbjct: 176 ------FAARHTP 182 >gi|319440491|ref|ZP_07989647.1| putative inner membrane protein translocase component YidC [Corynebacterium variabile DSM 44702] Length = 424 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%) Query: 381 KQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 KQ S M+ +QP++ E++ K+ K Q L+ M +L K +NPLA C P+L+QIP+ Sbjct: 53 KQLRSGRKMQEMQPRMQEIKRKYAKDQQQQALE--MRKLQKEMGVNPLASCLPMLVQIPI 110 Query: 440 FFAIYKVI 447 F ++ V+ Sbjct: 111 FIGLFHVL 118 >gi|307707578|ref|ZP_07644059.1| membrane protein OxaA 2 [Streptococcus mitis NCTC 12261] gi|307616291|gb|EFN95483.1| membrane protein OxaA 2 [Streptococcus mitis NCTC 12261] Length = 308 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 12/118 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNI 392 W F A PM + YF G FG+AI++ T+ V+L+ PL K + + M + Sbjct: 38 WNTFGA-PMAEAIKYFATDQGLGFGMAIIIVTIIVRLIILPLGIYQSWKATLHSEKMNAL 96 Query: 393 ----QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 +P L+E Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 97 KHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIY 154 >gi|226326142|ref|ZP_03801660.1| hypothetical protein COPCOM_03961 [Coprococcus comes ATCC 27758] gi|225205684|gb|EEG88038.1| hypothetical protein COPCOM_03961 [Coprococcus comes ATCC 27758] Length = 423 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 6/99 (6%) Query: 355 NLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK----QSPP 408 +L+G N G+ I+L T+ + L PL KQ + + P++ ++++K+K Q+ Sbjct: 33 DLIGIHNLGVCIILLTIVIYTLLMPLTIKQQKFSKMSAAMNPELQKVQQKYKGKNDQASM 92 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 Q +Q+ +Y+ + ++P GC + +Q P+ +A+Y VI Sbjct: 93 QKMQEETQLVYEKYGVSPTGGCLSMFIQFPILWAMYYVI 131 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 12/94 (12%) Query: 494 PIIMSLSMFIQMKMSP--------PPADKGQAMILNW---MPVVFVFALSSFPAGLIIYW 542 P++ LS ++ +K+S P AD+ + + +P+V VF + P GL IYW Sbjct: 257 PVLSGLSQYLSVKLSQQTTAVTNNPQADQMASTMKTMNVTLPLVSVFMCFTLPTGLGIYW 316 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 S V+ +VQQ I K H +I + + ++ K Sbjct: 317 VASAVVRMVQQFFINK-HLNKIPMDELIKENMEK 349 >gi|146319668|ref|YP_001199380.1| hypothetical protein SSU05_2014 [Streptococcus suis 05ZYH33] gi|146321863|ref|YP_001201574.1| hypothetical protein SSU98_2016 [Streptococcus suis 98HAH33] gi|253752665|ref|YP_003025806.1| membrane protein OxaA 1 precursor [Streptococcus suis SC84] gi|253754491|ref|YP_003027632.1| membrane protein OxaA 1 precursor [Streptococcus suis P1/7] gi|253756424|ref|YP_003029564.1| membrane protein OxaA 1 precursor [Streptococcus suis BM407] gi|166977421|sp|A4W485|OXAA_STRS2 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|145690474|gb|ABP90980.1| conserved hypothetical protein [Streptococcus suis 05ZYH33] gi|145692669|gb|ABP93174.1| conserved hypothetical protein [Streptococcus suis 98HAH33] gi|251816954|emb|CAZ52603.1| membrane protein OxaA 1 precursor [Streptococcus suis SC84] gi|251818888|emb|CAZ56731.1| membrane protein OxaA 1 precursor [Streptococcus suis BM407] gi|251820737|emb|CAR47499.1| membrane protein OxaA 1 precursor [Streptococcus suis P1/7] gi|292559284|gb|ADE32285.1| Hypothetical protein SSGZ1_1829 [Streptococcus suis GZ1] gi|319759082|gb|ADV71024.1| hypothetical protein SSUJS14_1975 [Streptococcus suis JS14] Length = 270 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 25/195 (12%) Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAMIQLYKTH 422 L T+ ++ L PL + Q S+ M+ +QP++ +L+ ++ Q L +A LYK + Sbjct: 60 LFTILIRTLLLPLFQIQMNSSRKMQELQPQLKKLQAEYPGTDMESRQQLYEATQALYKEN 119 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 ++ A P+ +Q+P+ A+++ ++ +E + W+ +L DP F ILP Sbjct: 120 GVSMRASMIPLFIQMPILLALFQALT-RVEALKVGHFLWL-NLGEPDP------FFILPI 171 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-ILNW-MPVVFVFALSSFPAGLII 540 F + W + +K AM I+ + MPV+ F + +G+ + Sbjct: 172 LAAVFTFLSSW------------LTNKSAIEKNMAMTIMTYVMPVMIFFFAVAAASGVAL 219 Query: 541 YWSWSNVISIVQQAV 555 YW+ SN + Q V Sbjct: 220 YWTVSNAYQVAQTLV 234 >gi|241957285|ref|XP_002421362.1| cytochrome oxidase biogenesis protein, putative; inner membrane protein, mitochondrial precursor, putative; mitochondrial inner membrane translocase, putative; oxidase assembly protein, putative [Candida dubliniensis CD36] gi|223644706|emb|CAX40696.1| cytochrome oxidase biogenesis protein, putative [Candida dubliniensis CD36] Length = 376 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/199 (22%), Positives = 95/199 (47%), Gaps = 23/199 (11%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---LYK 420 I++ T+ V+L+ FPL + + M I+P+IDEL ++ K +AM + + K Sbjct: 118 IVVATIAVRLILFPLYVRASSNATKMSKIKPQIDELLQQIKTGDTVEQMRAMEKRRLIMK 177 Query: 421 THNINPLAGCWPILLQIPV----FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 + ++ LA +P +Q+P+ F A+ K+ + ++E + W ++L DP Sbjct: 178 ENGVSTLATLFPA-VQLPLAYGFFQALRKMANHNVEGFSDQGYAWFQNLIEVDP------ 230 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 YL G + II + + + A G ++ +P+ +F F + Sbjct: 231 ------YL-GLQVISAAAIIAVVRVGGETGQHAMAA--GMKKVMTVVPIASIFITKGFAS 281 Query: 537 GLIIYWSWSNVISIVQQAV 555 +I+Y++ +++ S++Q ++ Sbjct: 282 AIILYFAVNSIFSLIQSSL 300 >gi|223933965|ref|ZP_03625923.1| 60 kDa inner membrane insertion protein [Streptococcus suis 89/1591] gi|302024559|ref|ZP_07249770.1| membrane protein OxaA 1 precursor [Streptococcus suis 05HAS68] gi|330833639|ref|YP_004402464.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3] gi|223897357|gb|EEF63760.1| 60 kDa inner membrane insertion protein [Streptococcus suis 89/1591] gi|329307862|gb|AEB82278.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3] Length = 270 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 25/195 (12%) Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAMIQLYKTH 422 L T+ ++ L PL + Q S+ M+ +QP++ +L+ ++ Q L +A LYK + Sbjct: 60 LFTILIRTLLLPLFQIQMNSSRKMQELQPQLKKLQAEYPGTDMESRQQLYEATQALYKEN 119 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 ++ A P+ +Q+P+ A+++ ++ +E + W+ +L DP F ILP Sbjct: 120 GVSMRASMIPLFIQMPILLALFQALT-RVEALKVGHFLWL-NLGEPDP------FFILPI 171 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-ILNW-MPVVFVFALSSFPAGLII 540 F + W + +K AM I+ + MPV+ F + +G+ + Sbjct: 172 MAAVFTFLSSW------------LTNKSAIEKNMAMTIMTYVMPVMIFFFAVAAASGVAL 219 Query: 541 YWSWSNVISIVQQAV 555 YW+ SN + Q V Sbjct: 220 YWTVSNAYQVAQTLV 234 >gi|111020651|ref|YP_703623.1| putative inner membrane protein translocase component YidC [Rhodococcus jostii RHA1] gi|110820181|gb|ABG95465.1| probable membrane protein, OxaA family protein [Rhodococcus jostii RHA1] Length = 370 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 101/250 (40%), Gaps = 58/250 (23%) Query: 361 GIAIMLTTVFV-----KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 GI L+ VF+ +L+ P K Q +T M+ +QP+I L++K+ Q M Sbjct: 31 GITWALSVVFLVFTLRAVLYKPFVK-QVRTTRQMQELQPQIKALQKKYSGDR-QRQAVEM 88 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--------------------------- 448 +L K H NP+ GC P+L Q PVF ++ V+ Sbjct: 89 QKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVLRSFNRTGTGIGQLGMSVEANANTPNYFF 148 Query: 449 --------ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +S + AP WI A + F +G +P L + V P+++ S Sbjct: 149 SVEDVQSFLSARLFGAPISAWITMPKAQ--LDAFAAYGPIPTVL--NIAVVAVPLMIIAS 204 Query: 501 MFIQ-------MKMSPPPADKGQAMILN----WM-PVVFVFALSSFPAGLIIYWSWSNVI 548 + + SP A Q+ I+N W+ P+ + P +++YW +N+ Sbjct: 205 IATHFNSRASVARQSPEAAANPQSAIMNKLALWIFPLGVLVGGPFLPIAILLYWVSNNIW 264 Query: 549 SIVQQAVIMK 558 + QQ ++ + Sbjct: 265 TYGQQHIVFR 274 >gi|320458433|dbj|BAJ69054.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 287 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 44/206 (21%), Positives = 95/206 (46%), Gaps = 24/206 (11%) Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQSP--PQVLQKAMIQLYK 420 M + +++ PL Q +T M+ +QP+I ++ K+ ++ P + +Q+ ++ L + Sbjct: 1 MCLVLIIRICLLPLFFSQMRATQRMQVLQPQIQRIQRKYAARKDPRSKEAMQREIMALQQ 60 Query: 421 THNINPLAGCWPILLQIPVFFAIY---KVISISLEMRHAPFWGWIKDLAAA-DPTNIFTL 476 HN NPL C L+Q P+ +++ + + S P G + +A + ++IF + Sbjct: 61 RHNANPLGSCLLSLIQAPILCSLFYTLQSLPASAAGNAEPLSGIDRVMAGDIESSSIFGV 120 Query: 477 -----FGILPFYLPGFMHVGIWPIIMSLSMFIQM-----KMSPP-----PADKGQAMILN 521 FG + + +G+ +M L +F + +P P + Q + Sbjct: 121 RIADSFGTV-VSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQFRTQKLTAF 179 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNV 547 P ++V + + P G+++YW +N+ Sbjct: 180 VFPAIYVVSGGTLPFGVLLYWLTNNL 205 >gi|271961730|ref|YP_003335926.1| inner membrane protein translocase component YidC [Streptosporangium roseum DSM 43021] gi|270504905|gb|ACZ83183.1| putative inner membrane protein translocase component YidC [Streptosporangium roseum DSM 43021] Length = 231 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 1/108 (0%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L++ +G+ +AI+L T+ V+LL PL+ Q + P++ ELR + + P Sbjct: 12 LITALAQPLGSTALAIVLFTLGVRLLLLPLSVMQARGERVRARLAPEVQELRRRHGRDP- 70 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 + L + + LY +PLAGC P Q+P F +Y+V + S+ HA Sbjct: 71 ERLHRELTALYAGEKASPLAGCLPGFAQMPFFMLMYQVFASSVIAGHA 118 >gi|256850849|ref|ZP_05556238.1| preprotein translocase subunit YidC [Lactobacillus jensenii 27-2-CHN] gi|260661060|ref|ZP_05861974.1| preprotein translocase subunit YidC [Lactobacillus jensenii 115-3-CHN] gi|282934480|ref|ZP_06339735.1| putative membrane protein [Lactobacillus jensenii 208-1] gi|297205723|ref|ZP_06923118.1| membrane protein OxaA [Lactobacillus jensenii JV-V16] gi|256615911|gb|EEU21099.1| preprotein translocase subunit YidC [Lactobacillus jensenii 27-2-CHN] gi|260547997|gb|EEX23973.1| preprotein translocase subunit YidC [Lactobacillus jensenii 115-3-CHN] gi|281301427|gb|EFA93716.1| putative membrane protein [Lactobacillus jensenii 208-1] gi|297148849|gb|EFH29147.1| membrane protein OxaA [Lactobacillus jensenii JV-V16] Length = 324 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 53/236 (22%), Positives = 109/236 (46%), Gaps = 34/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +G Y FI P+ +M N +G G AI + T ++ + PL +KK + Sbjct: 40 FGLIYQFIGIPIRNIMLATENAIGGTNGAGWAIAIITAVIRFVLLPLMLSSSKKSTIQQE 99 Query: 388 NMKNIQPKIDELREKFKQ---SPPQVLQKAMIQ--LYKTHNINPLAG--CWPILLQIPVF 440 + +Q + +++ K +P + +Q + +Q +Y+ +N++ G C P+++Q P Sbjct: 100 KVSRLQDQFKLIQDALKDRSLTPDKQMQISQLQQKVYRENNLSITGGIGCLPLIVQFPFM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + + F+G ++ P+ +F + G L FYL + S Sbjct: 160 IGIYQAVAYSDALYKSSFFG----VSLGKPSLLFAIVGAL-FYL-------------AQS 201 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + + +S Q+ I P++ +F S P L +Y+ +I+++QQ ++ Sbjct: 202 LLMLRGVSEQQRAAMQSTIF-ISPLMTLFISMSTPGALGLYFLVGGIIALIQQVIV 256 >gi|160914809|ref|ZP_02077023.1| hypothetical protein EUBDOL_00816 [Eubacterium dolichum DSM 3991] gi|158433349|gb|EDP11638.1| hypothetical protein EUBDOL_00816 [Eubacterium dolichum DSM 3991] Length = 328 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 12/132 (9%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 GWF I P+ L+ N+ +F G+ I++TT+ ++ + F + K V+T M++I Sbjct: 88 GWFNGLIVWPIAQLI----NITSSFTDAGVGIIITTLLIQFIIFLFSIKSQVATQKMQSI 143 Query: 393 QPKIDELREKFK---QSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 QP++++++ K+ ++LQ +Q LYK + INP +Q PV F +Y Sbjct: 144 QPELNKIQAKYAGRNDDRSKMLQAQEMQALYKKNQINPFGTILVTFIQFPVIFGMYYATM 203 Query: 449 ISLEMRHAPFWG 460 + + F+G Sbjct: 204 RAYAVVSGSFYG 215 >gi|332638155|ref|ZP_08417018.1| cell division protein [Weissella cibaria KACC 11862] Length = 277 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 31/202 (15%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQKAM 415 N+G+ I++ T+ ++LL PL Q S M+ + P + ++ K+ + +Q Sbjct: 62 NYGLGIIVFTLLIRLLILPLMVYQTRSMRKMQEVAPALKAIQAKYPNRDTESMAAMQAEQ 121 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAAADPTNIF 474 LYK +NP A P+++Q+P+ A+Y I + ++ F W L D Sbjct: 122 SALYKEAGVNPFASLLPLIVQMPILIALYTAIRTTKQLETGTFLWA---QLGQHD----- 173 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--MKMSPPPADKGQAMILNW-MPV-VFVFA 530 H+ I PI+ +L F + M P G + + MP+ +F+FA Sbjct: 174 --------------HLFILPILAALFTFASSYLVMLGQPEKNGMTTSMTYIMPIMIFIFA 219 Query: 531 LSSFPAGLIIYWSWSNVISIVQ 552 + + P+ L +YW SN + Q Sbjct: 220 I-NVPSALSLYWVVSNAFQVAQ 240 >gi|262282148|ref|ZP_06059917.1| membrane protein oxaA 2 [Streptococcus sp. 2_1_36FAA] gi|262262602|gb|EEY81299.1| membrane protein oxaA 2 [Streptococcus sp. 2_1_36FAA] Length = 310 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 31/232 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMK 390 G+ Y F+ PM ++ YF + +G FG+AI+L TV V+L+ PL Q + Sbjct: 36 GFVYQFLVAPMSQVIKYFASDLGLGFGLAIILVTVIVRLIILPLGLYQSWNATYQSEKRN 95 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 + P + E+ K + Q Q+A++ K + I+ L GC P+L+Q+P F A++ Sbjct: 96 YLSPIFTPINERMKNAETQEEKLAAQQALMAAQKENGISMLGGVGCLPLLIQMPFFSALF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + + F G + + I + VG+ I SL + Sbjct: 156 YAARYTKGIAESSFLG----INLGQQSMILIVV------------VGVLYYIQSLLSLV- 198 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + ++ + MI ++ +F+L++ PAG+ +YW + I+QQ +I Sbjct: 199 -GLDEEQKEQMKKMIYVSPLMIVIFSLTA-PAGVTLYWVVGGFVQILQQFII 248 >gi|224053781|ref|XP_002297976.1| inner membrane protein [Populus trichocarpa] gi|222845234|gb|EEE82781.1| inner membrane protein [Populus trichocarpa] Length = 459 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 34/235 (14%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E+ I YF + ++ ++ G N+ +I++TT+ ++ PL Q +T + Sbjct: 130 EVAIAAADSYFPVAALQHVIDAVHSFTGFNWWASIIVTTLLIRGATVPLLINQLKATTKL 189 Query: 390 KNIQPKIDELREKF--KQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 ++P ++E+R++ K P L QK M +L+K + ++PL + +Q P+F + + Sbjct: 190 TLMRPHLEEIRQQMSDKAMDPMALAEGQKQMKKLFKEYGVSPLTPLKGLFIQGPIFVSFF 249 Query: 445 KVISISLEMRHAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 IS E + G W DL D +L+ I PI+ L+ Sbjct: 250 LAISNMTEKVPSFKSGGAYWFLDLTTPD-----SLY--------------ILPILTGLTF 290 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSS------FPAGLIIYWSWSNVISI 550 +I ++ + +G + V VFA++S FP + YW SN+ S+ Sbjct: 291 WITVECNMQEGLEGNPIAATMKKVSRVFAVASVPLTMGFPNAIFCYWVTSNLFSL 345 >gi|241896112|ref|ZP_04783408.1| Oxa1 family cytochrome oxidase biogenesis protein [Weissella paramesenteroides ATCC 33313] gi|241870626|gb|EER74377.1| Oxa1 family cytochrome oxidase biogenesis protein [Weissella paramesenteroides ATCC 33313] Length = 315 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 71/133 (53%), Gaps = 13/133 (9%) Query: 341 FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQY----VSTANMKNIQ 393 F+ P+ M++ + +G G +I++ T+ V+L+ P+ Q + M+ +Q Sbjct: 25 FLKSPLTDFMNWSESTIGGVNAVGWSIIILTLAVRLILLPMMVHQQRNATIQQEKMRLLQ 84 Query: 394 PKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAGC--WPILLQIPVFFAIYKVI 447 P++ ++++ K + Q Q +AM+ +Y+ +N++ L G +++Q P+F +Y I Sbjct: 85 PQLKKVQDAQKNAQTQEEQLLASQAMMTIYRENNVSLLGGMNFTTLIIQWPIFMGLYSAI 144 Query: 448 SISLEMRHAPFWG 460 S E+ HA F+G Sbjct: 145 RYSNEIAHASFFG 157 >gi|157149880|ref|YP_001449837.1| OxaA-like protein precursor [Streptococcus gordonii str. Challis substr. CH1] gi|157074674|gb|ABV09357.1| Membrane protein oxaA 2 precursor [Streptococcus gordonii str. Challis substr. CH1] Length = 310 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 31/232 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMK 390 G+ Y F+ PM ++ YF + +G FG+AI+L TV V+L+ PL Q + Sbjct: 36 GFVYQFLVAPMSQVIKYFASDLGLGFGLAIILVTVIVRLIILPLGLYQSWNATYQSEKRN 95 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 + P + E+ K + Q Q+A++ K + I+ L GC P+L+Q+P F A++ Sbjct: 96 YLSPIFTPINERMKNAETQEEKLAAQQALMAAQKENGISMLGGVGCLPLLIQMPFFSALF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + + F G + + I + VG+ I SL + Sbjct: 156 YAARYTKGIAESSFLG----INLGQQSMILIVV------------VGVLYYIQSLLSLV- 198 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + ++ + MI ++ +F+L++ PAG+ +YW + I+QQ +I Sbjct: 199 -GLDEEQKEQMKKMIYVSPLMIVIFSLTA-PAGVTLYWVVGGFVQILQQFII 248 >gi|300859524|ref|YP_003784507.1| hypothetical protein cpfrc_02107 [Corynebacterium pseudotuberculosis FRC41] gi|300686978|gb|ADK29900.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] Length = 318 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AIML T ++ Q S M+ +QP + E+R+K+ + +++ + ++ K Sbjct: 34 LAIMLLTFTIRAFLVKPMLNQMRSARKMQELQPLMQEIRKKYGKDQQKMMAETR-KVQKE 92 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 +NP+AGC P L+Q+PVF ++ V+ Sbjct: 93 VGVNPIAGCLPALVQMPVFIGLFHVL 118 >gi|19112969|ref|NP_596177.1| mitochondrial inner membrane translocase Oxa102 [Schizosaccharomyces pombe 972h-] gi|13124377|sp|O43092|OXA12_SCHPO RecName: Full=Mitochondrial inner membrane protein oxa1-2; AltName: Full=Cytochrome oxidase biogenesis protein 1-2; Short=Sp2; Flags: Precursor gi|7363180|emb|CAB83161.1| mitochondrial inner membrane translocase Oxa102 [Schizosaccharomyces pombe] Length = 409 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 38/212 (17%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE----LREKFKQSPPQVLQKAMIQ- 417 +I V +++ FP+ K ++A + I PK+ E L + + +++ +A Q Sbjct: 118 SIAACAVAMRIAVFPIMLKMMKTSAKLAIINPKVAEHMSVLSKAKAEGNSELMMQATTQI 177 Query: 418 --LYKTHNINPL----AGCWPILLQIPVFFAIYKVISISLE-MRHAPFWGWIKDLAAADP 470 LYK +N+NPL A + +L I F+A+ + + +E FW W+ DL+ DP Sbjct: 178 QNLYKVNNVNPLNLLSAPVFQGILFISFFYALKTMAGVPVEGFTDGGFW-WVNDLSQPDP 236 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 +IF P+ L M + +++ AM + Sbjct: 237 LHIF-------------------PVANGLLMLLNIELGSETGSNKVAMSPSMKKFFRFLC 277 Query: 531 LSS------FPAGLIIYWSWSNVISIVQQAVI 556 L+S FP + +YW SNV S+ Q A + Sbjct: 278 LASPLFTMNFPMAIFMYWFPSNVFSVFQGAFL 309 >gi|302207207|gb|ADL11549.1| Inner membrane protein translocase component YidC [Corynebacterium pseudotuberculosis C231] gi|302331768|gb|ADL21962.1| Inner membrane protein translocase component YidC [Corynebacterium pseudotuberculosis 1002] gi|308277460|gb|ADO27359.1| Inner membrane protein translocase component YidC [Corynebacterium pseudotuberculosis I19] Length = 318 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AIML T ++ Q S M+ +QP + E+R+K+ + +++ + ++ K Sbjct: 34 LAIMLLTFTIRAFLVKPMLNQMRSARKMQELQPLMQEIRKKYGKDQQKMMAETR-KVQKE 92 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 +NP+AGC P L+Q+PVF ++ V+ Sbjct: 93 VGVNPIAGCLPALVQMPVFIGLFHVL 118 >gi|298695364|gb|ADI98586.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus subsp. aureus ED133] Length = 290 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 111/232 (47%), Gaps = 34/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 G+FY PM ++ + N L N+G+AI++ + ++++ P K ++ M Sbjct: 30 GFFYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKM 89 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P++++++EK K++ Q + A +IQ+YK +++NP+ GC P+L+Q+P+ Sbjct: 90 KVAKPEVEKIQEKVKRARTQEEKMAANQELIQVYKKYDMNPIKSMLGCLPMLIQLPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W DL D I + G+L F + Sbjct: 150 LYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ K P + M++ P++ ++ S + L +YWS S +VQ Sbjct: 192 AYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQ 243 >gi|157311737|ref|NP_001098600.1| mitochondrial inner membrane protein OXA1L [Danio rerio] gi|156230848|gb|AAI52010.1| Oxa1l protein [Danio rerio] Length = 469 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 27/206 (13%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQV-LQKA---M 415 AI+ T+ + FP+ K A + N+ P++ +L + KQS + KA + Sbjct: 178 AIVAGTIVARCAVFPVIVKGQREAAKLNNVMPEMTKLTNRMNEAKQSGNKFEFSKAYTDL 237 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM-----RHAPFWGWIKDLAAADP 470 + K ++NP G L+Q P+F + + + E+ + W W DL AADP Sbjct: 238 MMFQKKKDVNPFRGFLVPLVQAPIFLSFFIALRKMSELPVPSLQTGGLW-WFTDLTAADP 296 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 F ILP + G M + L + + + P + + MP V + Sbjct: 297 ------FYILPIAVTGTM-------VAILELGAESGVDNP-NLRAMKTVFRIMPFVILPL 342 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVI 556 +FP + YW SN+ S+ Q AV+ Sbjct: 343 TINFPTAVFTYWMTSNLFSLAQVAVL 368 >gi|2739285|emb|CAA63844.1| oxa1Sp2 [Schizosaccharomyces pombe] Length = 409 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 38/212 (17%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE----LREKFKQSPPQVLQKAMIQ- 417 +I V +++ FP+ K ++A + I PK+ E L + + +++ +A Q Sbjct: 118 SIAACAVAMRIAVFPIMLKMMKTSAKLAIINPKVAEHMSVLSKAKAEGNSELMMQATTQI 177 Query: 418 --LYKTHNINPL----AGCWPILLQIPVFFAIYKVISISLE-MRHAPFWGWIKDLAAADP 470 LYK +N+NPL A + +L I F+A+ + + +E FW W+ DL+ DP Sbjct: 178 QNLYKVNNVNPLNLLSAPVFQGILFISFFYALKTMAGVPVEGFTDGGFW-WVNDLSQPDP 236 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 +IF P+ L M + +++ AM + Sbjct: 237 LHIF-------------------PVANGLLMLLNIELGSETGSNKVAMSPSMKKFFRFLC 277 Query: 531 LSS------FPAGLIIYWSWSNVISIVQQAVI 556 L+S FP + +YW SNV S+ Q A + Sbjct: 278 LASPLFTMNFPMAIFMYWFPSNVFSVFQGAFL 309 >gi|299822979|ref|ZP_07054865.1| ParB/SpoJ family partitioning protein [Listeria grayi DSM 20601] gi|299816508|gb|EFI83746.1| ParB/SpoJ family partitioning protein [Listeria grayi DSM 20601] Length = 274 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 59/237 (24%), Positives = 114/237 (48%), Gaps = 34/237 (14%) Query: 337 GWF-YFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G+F ++ KP ++ +F + G++GIAI++TT+ ++ + PL AK Q M Sbjct: 32 GFFNVYLIKPFASVIKFFASFFDGSYGIAIIITTIIIRAIIMPLNLRTAKAQMGMQTKMA 91 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYK 445 +P+ID+++ + K++ + +Q+ M +Y+ ++INPL GC P+++Q+P+ A Y Sbjct: 92 AAKPEIDDIQARVKRAATKEEQVKIQQEMTLVYQKYDINPLQMGCLPLIIQMPILMAFYY 151 Query: 446 VISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S E+ H W P + + L G +++ L F+ Sbjct: 152 AIRGSQEIATHTFLW-----FNLGHPDMVLAI-------LAGLVYL--------LQYFVS 191 Query: 505 MKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 M + P K Q ++ + P + +F S P+ L +YW+ + Q + K++ Sbjct: 192 M-IGNTPEQKKQMRVMGLISPAMILFISFSAPSALALYWAVGGLFLAGQTLLTKKLY 247 >gi|130491697|ref|NP_001076302.1| hypothetical protein LOC562963 [Danio rerio] gi|126631996|gb|AAI34231.1| Zgc:163091 protein [Danio rerio] Length = 469 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 27/206 (13%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQV-LQKA---M 415 AI+ T+ + FP+ K A + N+ P++ +L + KQS + KA + Sbjct: 178 AIVAGTIVARCAVFPVIVKGQREAAKLNNVMPEMTKLTNRMNEAKQSGNKFEFSKAYTDL 237 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM-----RHAPFWGWIKDLAAADP 470 + K ++NP G L+Q P+F + + + E+ + W W DL AADP Sbjct: 238 MMFQKKKDVNPFRGFLVPLVQAPIFLSFFIALRKMSELPVPSLQTGGLW-WFTDLTAADP 296 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 F ILP + G M + L + + + P + + MP V + Sbjct: 297 ------FYILPIAVTGTM-------VAILELGAESGVDNP-NLRAMKTVFRIMPFVILPL 342 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVI 556 +FP + YW SN+ S+ Q AV+ Sbjct: 343 TINFPTAVFTYWMTSNLFSLAQVAVL 368 >gi|195069813|ref|XP_001997036.1| GH23226 [Drosophila grimshawi] gi|193906228|gb|EDW05095.1| GH23226 [Drosophila grimshawi] Length = 449 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 38/211 (18%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAMI 416 I + T+ V+ L FPL ++A M N +Q K+ E R+ + M+ Sbjct: 162 IAIGTICVRTLIFPLVILAQRNSARMSNNMPQMQVLQLKMTEARQSGNAIESARYAQEMM 221 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIY----KVISISLE-MRHAPFWGWIKDLAAADPT 471 + +NPL L Q P+F + + ++ + +E MR + W DL ADP Sbjct: 222 LFMREKGVNPLKNMIVPLAQAPLFLSFFMGLRQMANTPVESMRDGGLF-WFTDLTMADP- 279 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MILNWMPV 525 FYL P+I S ++++ +++ A A +L +P+ Sbjct: 280 ----------FYL--------LPVITSATLYLTIELGTDSARLSAANMNTMKYVLRALPI 321 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V +FPA ++ YW+ SN IS+ Q A++ Sbjct: 322 VIFPFTMNFPAAILTYWACSNFISLGQVALL 352 >gi|217928118|gb|ACK57254.1| CG6404-like protein [Drosophila affinis] Length = 305 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 40/213 (18%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAM 415 AI + T+ V+ + FPL ++A M N +Q K+ E R+ + M Sbjct: 114 AIAVGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQLLQLKMTEARQSGNAIESARYAQEM 173 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIY----KVISISLE-MRHAPFWGWIKDLAAADP 470 + + +NPL L Q P+F + + ++ + ++ MR W W +DL ADP Sbjct: 174 MLFMRDKGVNPLKNMIVPLAQAPLFISFFMGLRQMANTPVDSMRDGGLW-WFQDLTLADP 232 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MILNWMP 524 FY I P+I S ++++ +++ A A +L +P Sbjct: 233 -----------FY--------ILPLITSATLYLTIEIGTDSARLSAANMNTMKYVLRALP 273 Query: 525 -VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V+F F ++ FPA ++ YW+ SN IS+ Q AV+ Sbjct: 274 LVIFPFTMN-FPAAILTYWACSNFISLGQVAVL 305 >gi|195021527|ref|XP_001985412.1| GH17044 [Drosophila grimshawi] gi|193898894|gb|EDV97760.1| GH17044 [Drosophila grimshawi] Length = 457 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 38/211 (18%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAMI 416 I + T+ V+ L FPL ++A M N +Q K+ E R+ + M+ Sbjct: 162 IAIGTICVRTLIFPLVILAQRNSARMSNNMPQMQVLQLKMTEARQSGNAIESARYAQEMM 221 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIY----KVISISLE-MRHAPFWGWIKDLAAADPT 471 + +NPL L Q P+F + + ++ + +E MR + W DL ADP Sbjct: 222 LFMREKGVNPLKNMIVPLAQAPLFLSFFMGLRQMANTPVESMRDGGLF-WFTDLTMADP- 279 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MILNWMPV 525 FYL P+I S ++++ +++ A A +L +P+ Sbjct: 280 ----------FYL--------LPVITSATLYLTIELGTDSARLSAANMNTMKYVLRALPI 321 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V +FPA ++ YW+ SN IS+ Q A++ Sbjct: 322 VIFPFTMNFPAAILTYWACSNFISLGQVALL 352 >gi|255613972|ref|XP_002539553.1| conserved hypothetical protein [Ricinus communis] gi|223505007|gb|EEF22830.1| conserved hypothetical protein [Ricinus communis] Length = 88 Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFLF 309 W GI+DKYW + IP++ ++Q+ G Y+A F+A T+ PG+++T T LF Sbjct: 24 WTGITDKYWLTALIPTQNERINAQYNVTPVAGVDVYEANFAAVAKTVNPGQTVTETTRLF 83 Query: 310 AGAK 313 AGAK Sbjct: 84 AGAK 87 >gi|70725620|ref|YP_252534.1| hypothetical protein SH0619 [Staphylococcus haemolyticus JCSC1435] gi|68446344|dbj|BAE03928.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 277 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 34/244 (13%) Query: 337 GWFYFI-AKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G+FY I KPM ML+ + N+G+AI++ + ++L+ PL K ++ + Sbjct: 29 GFFYTIFVKPMDMLLHFLGRTFHENYGLAIIVIVLIIRLVLMPLMFIQVKNIHIMRGKTQ 88 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAI 443 ++P+I++L++K K + Q K +++ Y + INP L G PIL+QIP+ + Sbjct: 89 VVKPEIEKLQDKLKNADTQEERTAANKLLMKKYNDYGINPFKSLVGTLPILIQIPILLGL 148 Query: 444 YKVIS--ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y I S + P + W +L D I T L +++ ++ +P + Sbjct: 149 YACIKYPTSGGIIEHPHFLWF-NLMHTDL--IMTFIAALLYFIQPLVNAMHYPKEERRTY 205 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ M +S P+ ++A + L +YW+ S I+Q H Sbjct: 206 YVMMVLS---------------PLFIIYASLQSASALSLYWAISATFLIIQMH-FAHSHY 249 Query: 562 AEIG 565 A++G Sbjct: 250 AKVG 253 >gi|227892815|ref|ZP_04010620.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus ultunensis DSM 16047] gi|227865456|gb|EEJ72877.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus ultunensis DSM 16047] Length = 324 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 109/236 (46%), Gaps = 34/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +GW Y ++ KP+ +M + +++G G I++ TV V+++ PL K Sbjct: 39 YGWVYQWLGKPLQNIMIHTAHMIGGQNGAGWGIVIITVVVRVILMPLMLIQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ---SPPQ--VLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K +P Q L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQAAMKHKGITPQQQMTLSGWQRELYSKNEMSLTGGIGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + I T+F ++ Y+ +GI Sbjct: 159 WGIYQAVFYSPQLAHSTFFGISLSQKSLVLAIIATVFTVIQGYIS---LIGI-------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K ++ + P++ +F SF L +YW+ N++ IVQQ ++ Sbjct: 208 --------PEEQKKTMQSMMLFNPIMTLFFSLSFSGALALYWAAGNLVMIVQQIIV 255 >gi|309778005|ref|ZP_07672947.1| stage III sporulation protein J [Erysipelotrichaceae bacterium 3_1_53] gi|308914294|gb|EFP60092.1| stage III sporulation protein J [Erysipelotrichaceae bacterium 3_1_53] Length = 331 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 12/139 (8%) Query: 330 FEMLIDWGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVS 385 F ID GWF I P+ ++ N V +F GI I+ T ++LL F + K V+ Sbjct: 81 FSDAIDEGWFNGLIVWPI----AFLINFVADFSDAGIGIIAATFLIQLLIFLFSIKSQVA 136 Query: 386 TANMKNIQPKIDELREKF--KQSPPQVLQKA--MIQLYKTHNINPLAGCWPILLQIPVFF 441 + M+ IQP++++++ K+ K +Q+A M LY + INP +Q PV Sbjct: 137 SQRMQAIQPEMNKIQAKYAGKTDDRSKMQQAQEMQALYSKYKINPFGTLLVTFIQFPVIL 196 Query: 442 AIYKVISISLEMRHAPFWG 460 +Y+ + + F G Sbjct: 197 GMYQATMRAYSVVTGSFQG 215 >gi|19554125|ref|NP_602127.1| putative inner membrane protein translocase component YidC [Corynebacterium glutamicum ATCC 13032] gi|62391778|ref|YP_227180.1| inner membrane protein translocase component YidC [Corynebacterium glutamicum ATCC 13032] gi|38503052|sp|Q8NLK2|OXAA_CORGL RecName: Full=Membrane protein oxaA gi|41327120|emb|CAF20964.1| putative preprotein translocase subunit YidC, SpoIIIJ homolog [Corynebacterium glutamicum ATCC 13032] Length = 422 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 51/250 (20%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK----Q 405 +++F++L FG+ I ++ + P + Y S +I+P LRE++K + Sbjct: 30 LAWFFSL---FGLVIT-----IRAIIAPFTWQMYKSGRTAAHIRPHRAALREEYKGKYDE 81 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY-------------------KV 446 + + LQK L K + INPLAGC P L+QIP+ +Y + Sbjct: 82 ASIRELQKRQNDLNKEYGINPLAGCVPGLIQIPIVLGLYWALLRMARPEGGLENPVFQSI 141 Query: 447 ISISLEMRHAPFWGWIKDLA----AADPTNIF-----TLFGILPFYLPGFMHVGIWPII- 496 ++ E + G + ++ + PT T +L F LP F+ I I Sbjct: 142 GFLTPEEVESFLAGRVSNVPLPAYVSMPTEQLKYLSTTQAEVLSFVLPLFITAAILTAIN 201 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA---------LSSFPAGLIIYWSWSNV 547 M++SM+ + + + M L +M V+ + A FP + +YW +N+ Sbjct: 202 MAMSMYRSFQTNDYASGFSNGM-LKFMIVMSILAPIFPLSLGLTGPFPTAIALYWVSNNL 260 Query: 548 ISIVQQAVIM 557 +++Q ++M Sbjct: 261 WTLLQTIIMM 270 >gi|326693242|ref|ZP_08230247.1| integral membrane protein [Leuconostoc argentinum KCTC 3773] Length = 304 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 58/251 (23%), Positives = 118/251 (47%), Gaps = 39/251 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMKN 391 + +I +P+ +M+ +++G G AI++ T ++L+ P Q V+T M+ Sbjct: 31 YRWIGQPLADIMANIAHVIGGVNGIGWAIIIITAILRLILLPFFLNQQVNTTINQIKMQK 90 Query: 392 IQPKIDEL----REKFKQSPPQVLQKAMIQLYKTHNINPLAGC--WPILLQIPVFFAIYK 445 ++P+ID+L R+ + Q AM+ LY+ ++++ + G + +Q+PVF +Y Sbjct: 91 LKPEIDKLQAISRKAGTSAEQQQASMAMMSLYRENDVSVIGGISFLTLAMQLPVFSGLYA 150 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I + ++ A F+G L+ P IF + + + + ++ V + Sbjct: 151 AILHAPALKGATFFG----LSLGQPQLIFAIAAGVVYLVQAWIAV--------------L 192 Query: 506 KMSPPPADKGQAMILNWMPV-VFVFAL-SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +M P K A ++ P+ +FVFA+ +S GL Y+ + +++Q + +H Sbjct: 193 RM-PEEQKKASATMMLISPIMIFVFAMIASGAIGL--YFIVGGLFALLQSLI---LHFQR 246 Query: 564 IGLIDRLRSTF 574 GL R+ F Sbjct: 247 PGLEKRVAREF 257 >gi|269125945|ref|YP_003299315.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata DSM 43183] gi|268310903|gb|ACY97277.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata DSM 43183] Length = 235 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 1/88 (1%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ V+L PL+ + + P+I LR ++ P + LQ+ + L++ Sbjct: 35 IVVFTMAVRLSLLPLSIRAARGARARARLAPQIAGLRRRYAHDPVR-LQRELAALHRAEG 93 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISL 451 ++P AGC P L Q P FF +Y++ + ++ Sbjct: 94 VSPAAGCLPSLAQAPFFFLMYRLFTAAV 121 >gi|255074419|ref|XP_002500884.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299] gi|226516147|gb|ACO62142.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299] Length = 223 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 48/216 (22%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ--SPPQVL---QKAMIQ 417 AIM TT +++ P Q A M +P+I+ L + K QV+ QK + Sbjct: 11 AIMATTAIMRVFVMPFMVMQQRVAARMHIAKPEIEALNARIKGMGGDQQVMAEAQKEIFA 70 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH--------APFWGW----IKDL 465 ++K HN NP PI +Q P+F + Y IS EM P W + DL Sbjct: 71 IWKKHNCNPAYMMLPIAVQAPLFISFYFAIS---EMAKGVPSFASGGPDWPLGPISMHDL 127 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF--IQMKMSPPPADKG---QAMIL 520 AADPT I P++ S + +++ + P G Q M+ Sbjct: 128 TAADPTYIM-------------------PVLSSATFLATVELGGAGNPETSGAAQQTMMT 168 Query: 521 NW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 W + V + + F G+ +YW +N+ S+ Q Sbjct: 169 KWGLRALSVALIPMTAGFSKGVFVYWITTNMFSLGQ 204 >gi|21325713|dbj|BAC00334.1| Preprotein translocase subunit YidC [Corynebacterium glutamicum ATCC 13032] Length = 434 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 51/250 (20%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK----Q 405 +++F++L FG+ I ++ + P + Y S +I+P LRE++K + Sbjct: 42 LAWFFSL---FGLVIT-----IRAIIAPFTWQMYKSGRTAAHIRPHRAALREEYKGKYDE 93 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY-------------------KV 446 + + LQK L K + INPLAGC P L+QIP+ +Y + Sbjct: 94 ASIRELQKRQNDLNKEYGINPLAGCVPGLIQIPIVLGLYWALLRMARPEGGLENPVFQSI 153 Query: 447 ISISLEMRHAPFWGWIKDLA----AADPTNIF-----TLFGILPFYLPGFMHVGIWPII- 496 ++ E + G + ++ + PT T +L F LP F+ I I Sbjct: 154 GFLTPEEVESFLAGRVSNVPLPAYVSMPTEQLKYLSTTQAEVLSFVLPLFITAAILTAIN 213 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA---------LSSFPAGLIIYWSWSNV 547 M++SM+ + + + M L +M V+ + A FP + +YW +N+ Sbjct: 214 MAMSMYRSFQTNDYASGFSNGM-LKFMIVMSILAPIFPLSLGLTGPFPTAIALYWVSNNL 272 Query: 548 ISIVQQAVIM 557 +++Q ++M Sbjct: 273 WTLLQTIIMM 282 >gi|326503820|dbj|BAK02696.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 421 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 21/195 (10%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA---MIQLY 419 I LTTV ++ PL Q S+ + I+P+++ +++ + P+ + M L+ Sbjct: 154 CIALTTVLIRTATIPLLVSQLKSSQKLNAIKPEMEAIKDAMDSTDPKSALEGKYKMTALF 213 Query: 420 KTHNINPLAGCWPILLQIPV----FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + H ++P + IL+Q P+ FFAI ++ M+ + W DL DP I Sbjct: 214 QKHGVSPFSPLKGILIQGPMFMSFFFAINNMVEKVPSMKGGGVF-WFTDLTTPDPLYICP 272 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 + L F + + + + SM +MK + M L +P FA Sbjct: 273 VLAALTFL--ATVELNLQEGMEGNSMAGKMKTF------SRGMALMTVPFTMNFA----- 319 Query: 536 AGLIIYWSWSNVISI 550 G+ YW SN+ S+ Sbjct: 320 KGIFCYWITSNLFSL 334 >gi|297742331|emb|CBI34480.3| unnamed protein product [Vitis vinifera] Length = 443 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 40/243 (16%) Query: 343 AKPMFMLMSYFYNLVG--------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 A F L+ +L+G ++ +I LTT+ ++ + PL Q ST+ + ++P Sbjct: 127 AADSFFLVGILQHLIGGVHSYTGLSWAASIALTTLLIRGMTVPLLVNQLKSTSKLTLMRP 186 Query: 395 KIDELREKFKQ---SPPQVLQ--KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +RE+ + P V + K M Q++K + + P +++Q PVF + + + I Sbjct: 187 HLEAIREEMQAKGMEPSAVAEGNKRMQQIFKEYGVTPFTPLKGLIIQGPVFVSFF--LGI 244 Query: 450 SLEMRHAPFWG-----WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 S ++ P + W DL D I + L F I + +M Sbjct: 245 SNMVQKVPSFKTGGALWFTDLTTPDSFYIMPILAGLTFL-----------ITVEFNMQDG 293 Query: 505 MKMSPPPAD-KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI-----VQQAVIMK 558 M+ +P K + L ++ V F +F G+ YW SN+ S+ V+Q + K Sbjct: 294 MQGNPTAGTMKKFSRALAFLSVPFTM---NFAQGIFCYWIPSNLFSLAYGFAVKQPAVKK 350 Query: 559 MHG 561 M G Sbjct: 351 MFG 353 >gi|313900860|ref|ZP_07834350.1| putative stage III sporulation protein J [Clostridium sp. HGF2] gi|312954280|gb|EFR35958.1| putative stage III sporulation protein J [Clostridium sp. HGF2] Length = 331 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 12/139 (8%) Query: 330 FEMLIDWGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVS 385 F +D GWF I P+ ++ N V +F GI I+ T ++LL F + K V+ Sbjct: 81 FSDAMDEGWFNGLIVWPI----AFLINFVADFSDAGIGIIAATFLIQLLIFLFSIKSQVA 136 Query: 386 TANMKNIQPKIDELREKF--KQSPPQVLQKA--MIQLYKTHNINPLAGCWPILLQIPVFF 441 + M++IQP++++++ K+ K +Q+A M LY + INP +Q PV Sbjct: 137 SQRMQSIQPEMNKIQAKYAGKTDDRSKMQQAQEMQALYSKYKINPFGTLLVTFIQFPVIL 196 Query: 442 AIYKVISISLEMRHAPFWG 460 +Y+ + + F G Sbjct: 197 GMYQATMRAYSVVTGSFQG 215 >gi|312140437|ref|YP_004007773.1| integral membrane protein [Rhodococcus equi 103S] gi|325675949|ref|ZP_08155632.1| membrane protein OxaA [Rhodococcus equi ATCC 33707] gi|311889776|emb|CBH49093.1| putative integral membrane protein [Rhodococcus equi 103S] gi|325553187|gb|EGD22866.1| membrane protein OxaA [Rhodococcus equi ATCC 33707] Length = 293 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 A +Q + M+ +QP+I L++K+ Q + M +L + H NPL GC P+L+Q P Sbjct: 51 AIRQIRTGLQMRELQPQIKALQKKYA-GDRQRMALEMQKLQQEHGFNPLMGCLPMLVQAP 109 Query: 439 VFFAIYKVI 447 VF +Y V+ Sbjct: 110 VFIGLYHVL 118 >gi|313665770|ref|YP_004047641.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma leachii PG50] gi|312949391|gb|ADR23987.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma leachii PG50] Length = 396 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 78/321 (24%), Positives = 134/321 (41%), Gaps = 64/321 (19%) Query: 285 YQAKFSANEITILPGKSITTTNFLF-----AGAKEFPTIHHYEKDLAIPRFE----MLID 335 YQA++S N+I + GKS+ T F + ++ +HH+ D FE + Sbjct: 55 YQAQYSVNQIVDMTGKSVYTPGVSFEIILSSLGEQGSKVHHFVYDKG-SFFEYGYNAITS 113 Query: 336 W------------GWFYF----IAKPMFMLMSYFYNLVGN------FGI----AIMLTTV 369 W G+F + I M L S N + + +GI AI LTT+ Sbjct: 114 WKETFKLTQSPFYGFFVYPTAWILAGMIKLFSGTLNPLLDKSSQLSYGISAIFAIFLTTL 173 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQVLQKAMIQ---LYKTHNIN 425 +K + K ++ M++IQ K+ +++ K+K + Q QK ++ LYK N++ Sbjct: 174 LIKGITLSFGWKSQINQEKMQDIQLKVADIQAKYKDKKDMQSKQKQQLEIQALYKKENMS 233 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW------GWIKDLAAADPTNIFTLFGI 479 + +P FAIY ++ + ++ A G + + A + I L Sbjct: 234 QFSALAGSFAPLPFLFAIYAIVRSTRALKIAAVGPIALIEGPWQQITAGNYIYIIILAIY 293 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKM--------SPPPADKGQAMILNWMPVVFVFAL 531 LP + I M L +QMK + + K Q ++ M VF+ + Sbjct: 294 LP----------LQAISMLLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVMMFVFIIII 343 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 S G+ IYW +S+V+ I+Q Sbjct: 344 VSVATGVCIYWIFSSVLQIIQ 364 >gi|134078469|emb|CAK40411.1| unnamed protein product [Aspergillus niger] Length = 518 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 72/300 (24%), Positives = 122/300 (40%), Gaps = 50/300 (16%) Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 +A+++++ P + + A P Y K L + D+GW + M Sbjct: 110 AASDVSLAPQGEVNLNDLTAADINAIPEQIGYLKQLGL-------DFGWGF---SSMIEY 159 Query: 350 MSYFYNLVGNFG--IAIMLTTVFVKL-LFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 ++++G AI+ T +FV+L L +P ST + NI+ LR + Q+ Sbjct: 160 SVEHFHIMGGLPWWGAIVATGLFVRLGLLYPTLMAADTST-KLNNIKHLTTPLRTEMVQA 218 Query: 407 -------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI----SISLEMRH 455 + + QL+K H I P P ++ IP F Y+V+ S+ + Sbjct: 219 NYKNDLMEATRKRAELSQLHKDHGIKPWKAMIP-MIHIPFGFGCYRVVNNMCSLPVPGLT 277 Query: 456 APFWGWIKDLAAADPTNIFTLFG--ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W++DL +DP I L G IL L G+ QMK S Sbjct: 278 TEHVAWLQDLTVSDPYYILPLIGSVILHHTLKKGGETGM----------NQMKDS----- 322 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ-----QAVIMKMHGAEIGLID 568 +++ L MP + +++FP L +Y+ ++V ++ Q A KM G I L+D Sbjct: 323 AFKSLFLYGMPTISFLFMANFPGALQLYFLTTSVFALGQTYLLSSATFRKMAG--ITLVD 380 >gi|57234200|ref|YP_181756.1| inner membrane protein, 60 kDa [Dehalococcoides ethenogenes 195] gi|57224648|gb|AAW39705.1| inner membrane protein, 60 kDa [Dehalococcoides ethenogenes 195] Length = 277 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 16/198 (8%) Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + ++L +PL +KQ +T M+ I ++ L++K Q L + ++LYK ++P Sbjct: 1 MVIRLALWPLNRKQLTATKKMQEITVHMEALKKKHGNDR-QKLAEEQMKLYKESGVSPTG 59 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL-----FGILPFY 483 P+L+Q P++ A+Y+ I L + F + D + P TL F + Sbjct: 60 CLVPMLIQFPIWIALYQAIVRVLAVTPEDFMN-LADHLYSWPVVYQTLPLSNHFLWMDLS 118 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPA-----DKGQAMILNWMPVVFVFALSSFPAGL 538 LP F +++ +SM++Q KMS P A M+ MP +F F SFP+GL Sbjct: 119 LPDFALA----VLVGVSMYVQQKMSTPKAINQQQAAQGQMMSFMMPFMFFFFSLSFPSGL 174 Query: 539 IIYWSWSNVISIVQQAVI 556 YW S ++ I+ Q I Sbjct: 175 AFYWFVSAIVGIIMQYFI 192 >gi|300933178|ref|ZP_07148434.1| putative preprotein translocase subunit [Corynebacterium resistens DSM 45100] Length = 327 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 4/90 (4%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI----Q 417 I+I++ V ++ L FPLA +QY S ++ N++P + L ++K +K + + Sbjct: 33 ISIVMLVVTIRGLLFPLAYRQYASGRHLVNLRPSLRRLNAEYKGKKDAEARKEKLARERE 92 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 L K + + GC P L+Q+P+ A+Y+++ Sbjct: 93 LRKNSDYKMVDGCIPALIQVPLIIALYQLL 122 >gi|255731476|ref|XP_002550662.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240131671|gb|EER31230.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 378 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 27/198 (13%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM---IQLYK 420 I+ V +++ FPL K + M I+P+++ + ++ K KAM +L K Sbjct: 120 IITAAVAIRIFIFPLYVKASANATKMSKIKPEMEAIMDEIKAGGQAEQMKAMEKRRKLMK 179 Query: 421 THNINPLAGCWPILLQIP----VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 H+++ LA +P L+QIP F A+ K+ + ++E + W ++L DP Sbjct: 180 KHDVSMLASVYP-LVQIPFAYGFFQALRKMANANVEGFSDQGYAWFQNLIEVDP------ 232 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--KGQAMILNWMPVVFVFALSSF 534 YL +H IMS+ ++M A KG ++ +P+ + +F Sbjct: 233 ------YLG--LHAISCLAIMSI---VRMGGETGQATMAKGMQKLMYVLPLASIVITKNF 281 Query: 535 PAGLIIYWSWSNVISIVQ 552 A +++Y++ ++V+S++Q Sbjct: 282 AACVMVYFAANSVLSLIQ 299 >gi|300934353|ref|ZP_07149609.1| putative inner membrane protein translocase component YidC [Corynebacterium resistens DSM 45100] Length = 324 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 +AI+ +++ Q S+ M+ QPK+ EL+ K K + L M +L K Sbjct: 33 ALAIVFLVFTIRIFLIKPMANQLRSSRKMQEFQPKMQELQRKHKNDR-ETLAIEMRKLQK 91 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVI 447 +NPLA C P L+Q+P+F ++ V+ Sbjct: 92 EMGVNPLASCIPALIQMPIFIGLFHVL 118 >gi|238810221|dbj|BAH70011.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 663 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 15/154 (9%) Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ + LYK +NINPL I++ P+F A+++VI EM+ + G D AA Sbjct: 498 QQEIAALYKKNNINPLDAFLNIIISFPIFIAMWRVIQSIPEMKSTHWLG--MDFAATSWK 555 Query: 472 NIF----TLFGILPFYLPGFMHVGIWPIIMSLSMF-----IQMKMSPPPADKGQAMILNW 522 +F GIL L P +++ F I+ + + ++K Q +I+ Sbjct: 556 RLFAGEWAYLGILVVALAVQFFSQFTPRLLNRKKFKERTTIEEEKALKKSNKTQNIIM-- 613 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +VF+F F G+ +YW +S + +I+Q I Sbjct: 614 --IVFLFITLMFSCGVQVYWIFSGLWNIIQTISI 645 >gi|152967884|ref|YP_001363668.1| hypothetical protein Krad_3941 [Kineococcus radiotolerans SRS30216] gi|151362401|gb|ABS05404.1| 60 kDa inner membrane insertion protein [Kineococcus radiotolerans SRS30216] Length = 233 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 4/99 (4%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI----DELREKFK 404 ++ + +++ + +A++ V + L PL Q + ++P++ D R + Sbjct: 23 VLVHLHDVGAPWPLAVLGLVVLARTLLLPLFVAQQRAVLRAAALRPRVLAVQDRYRGRTD 82 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + + LQ+ + L++ +NPL GC P LLQ PVF A+ Sbjct: 83 PASRRALQQEVAALHRQAGVNPLGGCLPGLLQAPVFLAL 121 >gi|290581139|ref|YP_003485531.1| hypothetical protein SmuNN2025_1613 [Streptococcus mutans NN2025] gi|254998038|dbj|BAH88639.1| conserved hypothetical protein [Streptococcus mutans NN2025] Length = 271 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 69/132 (52%), Gaps = 13/132 (9%) Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF----KQSPPQVLQKAMIQLYKT 421 L T ++ + PL Q S M+ +QP++ L+ K+ ++S ++ +++ +LYK Sbjct: 60 LFTFLIRTILLPLFNLQLKSGQKMQELQPELKALQTKYPGKDRESRMRMAEESQ-ELYKK 118 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + +NP A +P+L+Q+PV +A+Y+ ++ ++ F W+ D+ DP + ILP Sbjct: 119 YGVNPYASLFPLLIQMPVLWALYQALTRVEFLKTGSFL-WM-DIGDKDP------YFILP 170 Query: 482 FYLPGFMHVGIW 493 F + W Sbjct: 171 VLAAIFTFLSSW 182 >gi|326429399|gb|EGD74969.1| hypothetical protein PTSG_07193 [Salpingoeca sp. ATCC 50818] Length = 370 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 41/214 (19%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI--- 416 FG I+L+T+ ++ L P+ + M N++P++ ++ KQ Q ++ I Sbjct: 75 FG-GIVLSTIAIRTLMLPITVAMMRNNVTMMNLRPEMQLHADRIKQCAAQGDEEGKIAAS 133 Query: 417 ----QLYKTHNINPLAGCWPILLQIPVF----FAIYKVISISLEMRHAPFWGWIKDLAAA 468 +L K + ++PL + QIPVF FA+ + + + + DL AA Sbjct: 134 QRLQELMKKNGVSPLKSLYG-FAQIPVFLSFFFALRSITGGEVASIKTGGYSFFTDLTAA 192 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM------ILNW 522 DPT + P++ + +M + ++S + G AM + Sbjct: 193 DPTYVL-------------------PVVTATTMLLSFELS---SRMGTAMSPTMKKVFRG 230 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + +V ++ P G+ YW SN+ ++ Q AV+ Sbjct: 231 LALVTGAVTATLPMGIHAYWITSNIFTLGQVAVL 264 >gi|225619519|ref|YP_002720776.1| putative inner membrane protein [Brachyspira hyodysenteriae WA1] gi|225214338|gb|ACN83072.1| putative inner membrane protein [Brachyspira hyodysenteriae WA1] Length = 1001 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 48/216 (22%), Positives = 97/216 (44%), Gaps = 17/216 (7%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----PKIDELREKFKQSPPQVLQKAM 415 +G+++ L ++ + L PL A + IQ P ID ++ +K +L + Sbjct: 34 YGVSLFLLSLCINFLSLPLYNIAESWQAKERAIQDKMKPMIDNIKAVYKGDQRYLLIRTC 93 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++ I G +L+QIP F A Y + SL + +IKDL+ D Sbjct: 94 QRINGYKTIYAFRGTLGLLIQIPFFMAAYNFVH-SLSGLSGQSFLFIKDLSKPDA----- 147 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 L I G + + + P +M+L + + +++ L + ++F+ L + P Sbjct: 148 LIHI------GNISINLLPFLMTLFSLLAGFVYSRKLKFKESLPLYIVSLIFLLLLYNSP 201 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 +GL+ YW+ + + S ++ +I++ EI + +R + Sbjct: 202 SGLLFYWTINCLFSFIKN-IIIEFKLYEIFVRNRYK 236 >gi|224437585|ref|ZP_03658541.1| inner membrane protein [Helicobacter cinaedi CCUG 18818] gi|313144038|ref|ZP_07806231.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129069|gb|EFR46686.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 317 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 39/240 (16%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA---KKQYVSTA 387 E +++W F + N+G++I+L ++ ++L L K+ S Sbjct: 14 EQVLEWALFTL------------FKATKNYGVSIILLSLIMQLFMLKLTFYFDKKAASFG 61 Query: 388 NMK-NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAI 443 +K KI E + FK + LQ + LYK + +P L G + LQIP F A+ Sbjct: 62 ALKAQCDSKIKEFKRVFKGAE---LQSYIRTLYKQKHFHPIFALFGLGGLALQIPFFIAM 118 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTL-FGILPFYLPGFMHVGIWPIIMSLSMF 502 ++ + ++ F WI DL+ D +F L ILP + F + ++ L Sbjct: 119 IHLVENAEYLQSVRFL-WIDDLSKPDSIMLFGLSIHILPLLMTAFTLINVFYSSKELDAR 177 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +Q G + L ++ +++ S P+ L++YW+ + S++++ K H + Sbjct: 178 VQ----------GSLIALLFLVLLY-----SMPSALVLYWTCNMFFSLLKEIFKHKKHSS 222 >gi|225619520|ref|YP_002720777.1| 60 kDa inner membrane protein [Brachyspira hyodysenteriae WA1] gi|225214339|gb|ACN83073.1| 60 kDa inner membrane protein [Brachyspira hyodysenteriae WA1] Length = 997 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/201 (22%), Positives = 89/201 (44%), Gaps = 16/201 (7%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----PKIDELREKFKQSPPQVLQKAM 415 +G+++ L ++ + L PL A + IQ P ID ++ +K +L + Sbjct: 34 YGVSLFLLSLCINFLSLPLYNIAESWQAKERAIQDKMKPMIDNIKAVYKGDQRYLLIRTC 93 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++ I G +L+QIP F A Y + SL + +IKDL+ D Sbjct: 94 QRINGYKTIYAFRGTLGLLIQIPFFMAAYNFVH-SLTGLSGQSFLFIKDLSKPDA----- 147 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 L I G + + + P +M+L + + +++ L + ++F+ L + P Sbjct: 148 LIHI------GNISINLLPFLMTLFSLLAGFVYSRKLKFKESLPLYIVSLIFLLLLYNSP 201 Query: 536 AGLIIYWSWSNVISIVQQAVI 556 +GL+ YW+ + + S ++ +I Sbjct: 202 SGLLFYWTINCLFSFIKNIII 222 >gi|195127181|ref|XP_002008047.1| GI12049 [Drosophila mojavensis] gi|193919656|gb|EDW18523.1| GI12049 [Drosophila mojavensis] Length = 423 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 38/212 (17%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAM 415 AI + T+ V+ L FPL ++A M N +Q K+ E R+ + M Sbjct: 124 AIAIGTLCVRTLIFPLVILAQRNSAKMSNNMPQMQVLQLKMTEARQSGNAIESARYAQEM 183 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIY----KVISISLE-MRHAPFWGWIKDLAAADP 470 + + +NPL L Q P+F + + ++ + +E MR + W DL ADP Sbjct: 184 MLFMREKGVNPLKNMIVPLAQAPLFISFFMGLRQMANTPVESMRDGGLF-WFTDLTLADP 242 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MILNWMP 524 +YL P+I S ++++ +++ A A +L +P Sbjct: 243 -----------YYL--------LPVITSATLYLTIELGTDSARLSAANMNTMKYVLRALP 283 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +V +FPA ++ YW+ SN IS+ Q A++ Sbjct: 284 IVIFPFTMNFPAAILTYWACSNFISLGQVALL 315 >gi|163784042|ref|ZP_02178998.1| hypothetical protein HG1285_01298 [Hydrogenivirga sp. 128-5-R1-1] gi|159880683|gb|EDP74231.1| hypothetical protein HG1285_01298 [Hydrogenivirga sp. 128-5-R1-1] Length = 387 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 29/182 (15%) Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 TA N+ G + + DK L++ SDI+ + I H W G +KY+ + + + Sbjct: 221 TAENSSRGHRGSV-IKTDKELIKIN-SDIKTTQIVRGHII--WAGEENKYFLQII--ANK 274 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITI-LPGKSITTTNFLFAGAKEFPTI----HHYEK 323 T F S + ANE T+ L F F G K + + Y+K Sbjct: 275 TGFTSTYIIPI-----------ANETTLTLSEIKGNLEGFFFGGPKLYSLLGQINEKYKK 323 Query: 324 ----DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 DLA+ ID+G+F + KP+F+++ + YN + N+ +AI++ TV ++++ FPL Sbjct: 324 EWNIDLALRN---TIDFGFFGILGKPLFLVLHFIYNFIHNWALAIIILTVLLRIILFPLN 380 Query: 380 KK 381 K Sbjct: 381 HK 382 >gi|156554266|ref|XP_001603843.1| PREDICTED: similar to cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Nasonia vitripennis] Length = 436 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 38/210 (18%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQKAMI 416 I++TT+ V+ L P+ K A M NIQP+I L+ + ++ L + Sbjct: 159 ILITTMCVRTLLLPVVIKIQRFAARMHNIQPQIQYLQSQLSEARKMGDRLEAARLSHELY 218 Query: 417 QLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLE-MRHAPFWGWIKDLAAADPT 471 + K ++P+ LLQ PVF A+ ++ +E M+ W W DL D Sbjct: 219 EFMKQKGVSPIKNAALPLLQAPVFLSFFWALKGMVQAPVESMKEGGLW-WFTDLTVPD-- 275 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-----ILNWMPVV 526 P+YL PII S+++ ++M A + Q++ ++ P + Sbjct: 276 ---------PYYL--------LPIITSMTLAATIEMG-TDAVRVQSLGLMRYVIRASPYI 317 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + F ++ YW +N+ S+VQ +++ Sbjct: 318 MFPFIMKFEGAILCYWVSTNMFSLVQVSIL 347 >gi|24378835|ref|NP_720790.1| hypothetical protein SMU.337 [Streptococcus mutans UA159] gi|38503009|sp|Q8DVX3|OXAA1_STRMU RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|24376711|gb|AAN58096.1|AE014881_10 conserved hypothetical protein; putative membrane protein [Streptococcus mutans UA159] Length = 271 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 69/132 (52%), Gaps = 13/132 (9%) Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF----KQSPPQVLQKAMIQLYKT 421 L T ++ + PL Q S M+ +QP++ L+ K+ ++S ++ +++ +LYK Sbjct: 60 LFTFLIRTILLPLFNLQLKSGQKMQELQPELKALQTKYPGKDRESRMRMAEESQ-ELYKK 118 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + +NP A +P+L+Q+PV +A+Y+ ++ ++ F W+ D+ DP + ILP Sbjct: 119 YGVNPYASLFPLLIQMPVLWALYQALTRVEFLKTGSFL-WM-DIGNKDP------YFILP 170 Query: 482 FYLPGFMHVGIW 493 F + W Sbjct: 171 VLAAIFTFLSSW 182 >gi|257413827|ref|ZP_04744347.2| sporulation associated-membrane protein [Roseburia intestinalis L1-82] gi|257202162|gb|EEV00447.1| sporulation associated-membrane protein [Roseburia intestinalis L1-82] Length = 430 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 64/114 (56%), Gaps = 9/114 (7%) Query: 342 IAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 IAK + +M+ Y L + N G++I++ T+ + + FPL KQ + + +QP++ Sbjct: 14 IAKVLGWVMNGIYALMSMIGIENVGLSIIIFTIVIYAILFPLTYKQQKFSKLSQKMQPEL 73 Query: 397 DELREKFK----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 +++K+ Q+ +Q+ +Y+ + ++ + C +L+Q+P+ FA+Y+V Sbjct: 74 QAIQKKYNGKKDQASMMAMQEETQAVYEKYGVSMMGSCVQMLIQMPLLFALYRV 127 >gi|295428677|ref|ZP_06821303.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus EMRSA16] gi|295127347|gb|EFG56987.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus EMRSA16] Length = 290 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 111/232 (47%), Gaps = 34/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 G+FY PM ++ + N L N+G+AI++ + ++++ P K ++ M Sbjct: 30 GFFYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKM 89 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P++++++EK K++ Q + A ++Q+YK +++NP+ GC P+L+Q+P+ Sbjct: 90 KVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W DL D I + G+L F + Sbjct: 150 LYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ K P + M++ P++ ++ S + L +YWS S +VQ Sbjct: 192 AYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQ 243 >gi|49484314|ref|YP_041538.1| hypothetical protein SAR2179 [Staphylococcus aureus subsp. aureus MRSA252] gi|56749221|sp|Q6GEY5|OXAA_STAAR RecName: Full=Membrane protein oxaA; Flags: Precursor gi|49242443|emb|CAG41159.1| putative membrane protein [Staphylococcus aureus subsp. aureus MRSA252] Length = 290 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 111/232 (47%), Gaps = 34/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 G+FY PM ++ + N L N+G+AI++ + ++++ P K ++ M Sbjct: 30 GFFYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKM 89 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P++++++EK K++ Q + A ++Q+YK +++NP+ GC P+L+Q+P+ Sbjct: 90 KVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W DL D I + G+L F + Sbjct: 150 LYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ K P + M++ P++ ++ S + L +YWS S +VQ Sbjct: 192 AYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQ 243 >gi|21356443|ref|NP_648417.1| CG6404, isoform B [Drosophila melanogaster] gi|24662345|ref|NP_729634.1| CG6404, isoform A [Drosophila melanogaster] gi|5052482|gb|AAD38571.1|AF145596_1 BcDNA.GH02220 [Drosophila melanogaster] gi|23093704|gb|AAF50127.2| CG6404, isoform A [Drosophila melanogaster] gi|23093705|gb|AAN11911.1| CG6404, isoform B [Drosophila melanogaster] gi|220943722|gb|ACL84404.1| CG6404-PA [synthetic construct] gi|220953572|gb|ACL89329.1| CG6404-PA [synthetic construct] Length = 441 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 42/213 (19%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAMI 416 I + T+ V+ + FPL ++A M N +Q K+ E R+ + M+ Sbjct: 156 IAIGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQMLQLKMTEARQSGNAIESARYAQEMM 215 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAAD 469 + +NPL L Q P+F + + + +M +AP W DL AD Sbjct: 216 LFMREKGVNPLKNMVVPLAQAPLFISFFMGLR---QMANAPVESMRDGGLFWFTDLTMAD 272 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MILNWM 523 P FYL P+I S ++++ +++ A A +L + Sbjct: 273 P-----------FYL--------LPLITSATLYLTIEIGTDSARLSAANMNTMKYVLRAL 313 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P+V +FPA ++ YW+ SN IS+ Q AV+ Sbjct: 314 PIVIFPFTMNFPAAILTYWACSNFISLGQVAVL 346 >gi|308190321|ref|YP_003923252.1| inner membrane protein translocase component [Mycoplasma fermentans JER] gi|307625063|gb|ADN69368.1| inner membrane protein translocase component [Mycoplasma fermentans JER] Length = 605 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 15/154 (9%) Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ + LYK +NINPL I++ P+F A+++VI EM+ + G D AA Sbjct: 440 QQEIAALYKKNNINPLDAFLNIIISFPIFIAMWRVIQSIPEMKSTHWLG--MDFAATSWK 497 Query: 472 NIF----TLFGILPFYLPGFMHVGIWPIIMSLSMF-----IQMKMSPPPADKGQAMILNW 522 +F GIL L P +++ F I+ + + ++K Q +I+ Sbjct: 498 RLFAGEWAYLGILVVALAVQFFSQFTPRLLNRKKFKERTTIEEEKALKKSNKTQNIIM-- 555 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +VF+F F G+ +YW +S + +I+Q I Sbjct: 556 --IVFLFITLMFSCGVQVYWIFSGLWNIIQTISI 587 >gi|319777717|ref|YP_004137368.1| hypothetical protein MfeM64YM_0996 [Mycoplasma fermentans M64] gi|318038792|gb|ADV34991.1| Conserved Hypothetical Protein [Mycoplasma fermentans M64] Length = 605 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 15/154 (9%) Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ + LYK +NINPL I++ P+F A+++VI EM+ + G D AA Sbjct: 440 QQEIAALYKKNNINPLDAFLNIIISFPIFIAMWRVIQSIPEMKSTHWLG--MDFAATSWK 497 Query: 472 NIF----TLFGILPFYLPGFMHVGIWPIIMSLSMF-----IQMKMSPPPADKGQAMILNW 522 +F GIL L P +++ F I+ + + ++K Q +I+ Sbjct: 498 RLFAGEWAYLGILVVALAVQFFSQFTPRLLNRKKFKERTTIEEEKALKKSNKTQNIIM-- 555 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +VF+F F G+ +YW +S + +I+Q I Sbjct: 556 --IVFLFITLMFSCGVQVYWIFSGLWNIIQTISI 587 >gi|145296949|ref|YP_001139770.1| putative inner membrane protein translocase component YidC [Corynebacterium glutamicum R] gi|140846869|dbj|BAF55868.1| hypothetical protein [Corynebacterium glutamicum R] Length = 422 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 51/250 (20%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK----Q 405 +++F++L FG+ I ++ + P + Y S +I+P LRE++K + Sbjct: 30 LAWFFSL---FGLVIT-----IRAIIAPFTWQMYKSGRTAAHIRPHRAALREEYKGKYDE 81 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY-------------------KV 446 + + LQK L K + INPLAGC P L+QIP+ +Y + Sbjct: 82 ASIRELQKRQNDLNKEYGINPLAGCVPGLIQIPIVLGLYWALLRMARPEGGLENPVFQSI 141 Query: 447 ISISLEMRHAPFWGWIKDLA----AADPTNIF-----TLFGILPFYLPGFMHVGIWPII- 496 ++ E + G + ++ + PT T +L F LP F+ I I Sbjct: 142 GFLTPEEVESFLAGRVSNVPLPAYVSMPTEQLEYLSTTQAEVLNFVLPLFITAAILTAIN 201 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA---------LSSFPAGLIIYWSWSNV 547 M++SM+ + + + M L +M V+ + A FP + +YW +N+ Sbjct: 202 MAMSMYRSFQTNDYASGFSNGM-LKFMIVMSILAPIFPLSLGLTGPFPTAIALYWVSNNL 260 Query: 548 ISIVQQAVIM 557 +++Q ++M Sbjct: 261 WTLLQTIIMM 270 >gi|15925080|ref|NP_372614.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu50] gi|15927665|ref|NP_375198.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus N315] gi|21283742|ref|NP_646830.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MW2] gi|49486883|ref|YP_044104.1| hypothetical protein SAS1994 [Staphylococcus aureus subsp. aureus MSSA476] gi|57650764|ref|YP_186898.1| hypothetical protein SACOL2082 [Staphylococcus aureus subsp. aureus COL] gi|82751692|ref|YP_417433.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus RF122] gi|87161292|ref|YP_494692.1| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195993|ref|YP_500806.1| hypothetical protein SAOUHSC_02327 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268542|ref|YP_001247485.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus subsp. aureus JH9] gi|150394606|ref|YP_001317281.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus subsp. aureus JH1] gi|151222206|ref|YP_001333028.1| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus str. Newman] gi|156980406|ref|YP_001442665.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu3] gi|253317154|ref|ZP_04840367.1| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731073|ref|ZP_04865238.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733076|ref|ZP_04867241.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus aureus subsp. aureus TCH130] gi|255006879|ref|ZP_05145480.2| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257426229|ref|ZP_05602644.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus 55/2053] gi|257428887|ref|ZP_05605281.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus 65-1322] gi|257431497|ref|ZP_05607870.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus 68-397] gi|257434206|ref|ZP_05610556.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus E1410] gi|257437118|ref|ZP_05613158.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus M876] gi|257793849|ref|ZP_05642828.1| membrane protein oxaA [Staphylococcus aureus A9781] gi|258407017|ref|ZP_05680167.1| membrane protein OxaA [Staphylococcus aureus A9763] gi|258422038|ref|ZP_05684955.1| membrane-embedded lipoprotein [Staphylococcus aureus A9719] gi|258422909|ref|ZP_05685809.1| membrane-embedded lipoprotein [Staphylococcus aureus A9635] gi|258433592|ref|ZP_05688665.1| membrane protein oxaA [Staphylococcus aureus A9299] gi|258440487|ref|ZP_05690657.1| membrane-embedded lipoprotein [Staphylococcus aureus A8115] gi|258445695|ref|ZP_05693873.1| membrane protein oxaA [Staphylococcus aureus A6300] gi|258450149|ref|ZP_05698244.1| membrane-embedded lipoprotein [Staphylococcus aureus A6224] gi|258453199|ref|ZP_05701190.1| membrane protein oxaA [Staphylococcus aureus A5948] gi|258453396|ref|ZP_05701378.1| membrane protein oxaA [Staphylococcus aureus A5937] gi|262049258|ref|ZP_06022133.1| lipoprotein precursor [Staphylococcus aureus D30] gi|269203726|ref|YP_003282995.1| hypothetical protein SAAV_2144 [Staphylococcus aureus subsp. aureus ED98] gi|282894735|ref|ZP_06302961.1| membrane protein oxaA [Staphylococcus aureus A8117] gi|282904758|ref|ZP_06312632.1| putative lipoprotein [Staphylococcus aureus subsp. aureus C160] gi|282906435|ref|ZP_06314286.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus Btn1260] gi|282909403|ref|ZP_06317218.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911655|ref|ZP_06319454.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus WBG10049] gi|282914937|ref|ZP_06322717.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M899] gi|282920268|ref|ZP_06327992.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C427] gi|282923079|ref|ZP_06330764.1| membrane protein oxaA [Staphylococcus aureus A9765] gi|282925479|ref|ZP_06333133.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C101] gi|282929015|ref|ZP_06336600.1| membrane protein oxaA [Staphylococcus aureus A10102] gi|283771258|ref|ZP_06344147.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus H19] gi|283958870|ref|ZP_06376315.1| putative lipoprotein [Staphylococcus aureus subsp. aureus A017934/97] gi|284025125|ref|ZP_06379523.1| hypothetical protein Saura13_11083 [Staphylococcus aureus subsp. aureus 132] gi|293509008|ref|ZP_06667795.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 58-424] gi|293510921|ref|ZP_06669620.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus M809] gi|293547523|ref|ZP_06672198.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M1015] gi|294850062|ref|ZP_06790799.1| membrane protein oxaA [Staphylococcus aureus A9754] gi|295407021|ref|ZP_06816823.1| membrane protein oxaA [Staphylococcus aureus A8819] gi|296276880|ref|ZP_06859387.1| hypothetical protein SauraMR_11054 [Staphylococcus aureus subsp. aureus MR1] gi|297210090|ref|ZP_06926483.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297246020|ref|ZP_06929877.1| membrane protein oxaA [Staphylococcus aureus A8796] gi|297589843|ref|ZP_06948483.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MN8] gi|300910453|ref|ZP_07127905.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus TCH70] gi|304379271|ref|ZP_07362010.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54038805|sp|P65629|OXAA_STAAN RecName: Full=Membrane protein oxaA; Flags: Precursor gi|54038806|sp|P65630|OXAA_STAAW RecName: Full=Membrane protein oxaA; Flags: Precursor gi|54041694|sp|P65628|OXAA_STAAM RecName: Full=Membrane protein oxaA; Flags: Precursor gi|56749186|sp|Q6G7M0|OXAA_STAAS RecName: Full=Membrane protein oxaA; Flags: Precursor gi|81694068|sp|Q5HEA9|OXAA_STAAC RecName: Full=Membrane protein oxaA; Flags: Precursor gi|122538967|sp|Q2FWG4|OXAA_STAA8 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|123484953|sp|Q2FF36|OXAA_STAA3 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|123548228|sp|Q2YUI9|OXAA_STAAB RecName: Full=Membrane protein oxaA; Flags: Precursor gi|189036365|sp|A7X4S6|OXAA_STAA1 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|189036366|sp|A6U3H6|OXAA_STAA2 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|189036367|sp|A5IUN6|OXAA_STAA9 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|189036368|sp|A6QIT4|OXAA_STAAE RecName: Full=Membrane protein oxaA; Flags: Precursor gi|13701885|dbj|BAB43177.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus N315] gi|14247863|dbj|BAB58252.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu50] gi|21205184|dbj|BAB95878.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MW2] gi|49245326|emb|CAG43801.1| putative membrane protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57284950|gb|AAW37044.1| membrane protein, putative [Staphylococcus aureus subsp. aureus COL] gi|82657223|emb|CAI81663.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus RF122] gi|87127266|gb|ABD21780.1| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203551|gb|ABD31361.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741611|gb|ABQ49909.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus subsp. aureus JH9] gi|149947058|gb|ABR52994.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus subsp. aureus JH1] gi|150375006|dbj|BAF68266.1| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus str. Newman] gi|156722541|dbj|BAF78958.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu3] gi|253725200|gb|EES93929.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728984|gb|EES97713.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus aureus subsp. aureus TCH130] gi|257270934|gb|EEV03107.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus 55/2053] gi|257274229|gb|EEV05746.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus 65-1322] gi|257277738|gb|EEV08408.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus 68-397] gi|257280845|gb|EEV10990.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus E1410] gi|257283511|gb|EEV13638.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus M876] gi|257787821|gb|EEV26161.1| membrane protein oxaA [Staphylococcus aureus A9781] gi|257841350|gb|EEV65794.1| membrane protein OxaA [Staphylococcus aureus A9763] gi|257841938|gb|EEV66370.1| membrane-embedded lipoprotein [Staphylococcus aureus A9719] gi|257846933|gb|EEV70947.1| membrane-embedded lipoprotein [Staphylococcus aureus A9635] gi|257849323|gb|EEV73302.1| membrane protein oxaA [Staphylococcus aureus A9299] gi|257852556|gb|EEV76474.1| membrane-embedded lipoprotein [Staphylococcus aureus A8115] gi|257855534|gb|EEV78471.1| membrane protein oxaA [Staphylococcus aureus A6300] gi|257856623|gb|EEV79529.1| membrane-embedded lipoprotein [Staphylococcus aureus A6224] gi|257859145|gb|EEV82002.1| membrane protein oxaA [Staphylococcus aureus A5948] gi|257864377|gb|EEV87123.1| membrane protein oxaA [Staphylococcus aureus A5937] gi|259162623|gb|EEW47190.1| lipoprotein precursor [Staphylococcus aureus D30] gi|262076016|gb|ACY11989.1| hypothetical protein SAAV_2144 [Staphylococcus aureus subsp. aureus ED98] gi|269941690|emb|CBI50097.1| putative membrane protein [Staphylococcus aureus subsp. aureus TW20] gi|282312880|gb|EFB43281.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C101] gi|282316128|gb|EFB46509.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C427] gi|282321140|gb|EFB51471.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M899] gi|282324420|gb|EFB54733.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus WBG10049] gi|282326673|gb|EFB56971.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330385|gb|EFB59903.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus Btn1260] gi|282589321|gb|EFB94413.1| membrane protein oxaA [Staphylococcus aureus A10102] gi|282593270|gb|EFB98267.1| membrane protein oxaA [Staphylococcus aureus A9765] gi|282594791|gb|EFB99768.1| putative lipoprotein [Staphylococcus aureus subsp. aureus C160] gi|282762823|gb|EFC02957.1| membrane protein oxaA [Staphylococcus aureus A8117] gi|283459463|gb|EFC06556.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus H19] gi|283789588|gb|EFC28411.1| putative lipoprotein [Staphylococcus aureus subsp. aureus A017934/97] gi|285817755|gb|ADC38242.1| OxaI/YidC membrane insertion protein [Staphylococcus aureus 04-02981] gi|290919643|gb|EFD96716.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M1015] gi|291094712|gb|EFE24984.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 58-424] gi|291466206|gb|EFF08733.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus M809] gi|294823010|gb|EFG39442.1| membrane protein oxaA [Staphylococcus aureus A9754] gi|294968046|gb|EFG44073.1| membrane protein oxaA [Staphylococcus aureus A8819] gi|296885290|gb|EFH24230.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177019|gb|EFH36274.1| membrane protein oxaA [Staphylococcus aureus A8796] gi|297576971|gb|EFH95685.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MN8] gi|300888295|gb|EFK83486.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus TCH70] gi|302333736|gb|ADL23929.1| OxaI/YidC membrane insertion protein [Staphylococcus aureus subsp. aureus JKD6159] gi|302751971|gb|ADL66148.1| OxaI/YidC membrane insertion protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304342130|gb|EFM08030.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830442|emb|CBX35284.1| 60Kd inner membrane family protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128761|gb|EFT84761.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus CGS03] gi|315193252|gb|EFU23650.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus CGS00] gi|315196976|gb|EFU27318.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus CGS01] gi|320140737|gb|EFW32589.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus subsp. aureus MRSA131] gi|320143713|gb|EFW35490.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus subsp. aureus MRSA177] gi|323439193|gb|EGA96920.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus O11] gi|323442429|gb|EGB00058.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus O46] gi|329724000|gb|EGG60524.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus subsp. aureus 21189] gi|329726332|gb|EGG62800.1| putative stage III sporulation protein J [Staphylococcus aureus subsp. aureus 21172] gi|329729297|gb|EGG65705.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus subsp. aureus 21193] Length = 290 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 111/232 (47%), Gaps = 34/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 G+FY PM ++ + N L N+G+AI++ + ++++ P K ++ M Sbjct: 30 GFFYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKM 89 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P++++++EK K++ Q + A ++Q+YK +++NP+ GC P+L+Q+P+ Sbjct: 90 KVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W DL D I + G+L F + Sbjct: 150 LYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ K P + M++ P++ ++ S + L +YWS S +VQ Sbjct: 192 AYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQ 243 >gi|317032058|ref|XP_001393915.2| hypothetical protein ANI_1_1524084 [Aspergillus niger CBS 513.88] Length = 496 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 72/300 (24%), Positives = 122/300 (40%), Gaps = 50/300 (16%) Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 +A+++++ P + + A P Y K L + D+GW + M Sbjct: 88 AASDVSLAPQGEVNLNDLTAADINAIPEQIGYLKQLGL-------DFGWGF---SSMIEY 137 Query: 350 MSYFYNLVGNFG--IAIMLTTVFVKL-LFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 ++++G AI+ T +FV+L L +P ST + NI+ LR + Q+ Sbjct: 138 SVEHFHIMGGLPWWGAIVATGLFVRLGLLYPTLMAADTST-KLNNIKHLTTPLRTEMVQA 196 Query: 407 -------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI----SISLEMRH 455 + + QL+K H I P P ++ IP F Y+V+ S+ + Sbjct: 197 NYKNDLMEATRKRAELSQLHKDHGIKPWKAMIP-MIHIPFGFGCYRVVNNMCSLPVPGLT 255 Query: 456 APFWGWIKDLAAADPTNIFTLFG--ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W++DL +DP I L G IL L G+ QMK S Sbjct: 256 TEHVAWLQDLTVSDPYYILPLIGSVILHHTLKKGGETGM----------NQMKDS----- 300 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ-----QAVIMKMHGAEIGLID 568 +++ L MP + +++FP L +Y+ ++V ++ Q A KM G I L+D Sbjct: 301 AFKSLFLYGMPTISFLFMANFPGALQLYFLTTSVFALGQTYLLSSATFRKMAG--ITLVD 358 >gi|225426348|ref|XP_002270313.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 445 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 40/239 (16%) Query: 347 FMLMSYFYNLVG--------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F L+ +L+G ++ +I LTT+ ++ + PL Q ST+ + ++P ++ Sbjct: 131 FFLVGILQHLIGGVHSYTGLSWAASIALTTLLIRGMTVPLLVNQLKSTSKLTLMRPHLEA 190 Query: 399 LREKFKQ---SPPQVLQ--KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +RE+ + P V + K M Q++K + + P +++Q PVF + + + IS + Sbjct: 191 IREEMQAKGMEPSAVAEGNKRMQQIFKEYGVTPFTPLKGLIIQGPVFVSFF--LGISNMV 248 Query: 454 RHAPFWG-----WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + P + W DL D I + L F I + +M M+ + Sbjct: 249 QKVPSFKTGGALWFTDLTTPDSFYIMPILAGLTFL-----------ITVEFNMQDGMQGN 297 Query: 509 PPPAD-KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI-----VQQAVIMKMHG 561 P K + L ++ V F +F G+ YW SN+ S+ V+Q + KM G Sbjct: 298 PTAGTMKKFSRALAFLSVPFTM---NFAQGIFCYWIPSNLFSLAYGFAVKQPAVKKMFG 353 >gi|321259157|ref|XP_003194299.1| hypothetical protein CGB_E3570C [Cryptococcus gattii WM276] gi|317460770|gb|ADV22512.1| Conserved hypothetical protein [Cryptococcus gattii WM276] Length = 468 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 41/218 (18%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAM 415 AI TTV ++L L + + + P+I EL + K + ++ + + Sbjct: 149 AIAGTTVLIRLCLTRLVVNTQKHSVRLAAVNPQIQELMTEAKTASANKDTHMQTLISQRL 208 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADP- 470 L K HN+NPL L+Q+P+F + ++ ++ L GW+ DL AADP Sbjct: 209 RDLMKEHNVNPLRPLMLPLIQMPIFLTFFSIVRGLANLPLPQLKEGGLGWVTDLTAADPY 268 Query: 471 ----------TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 TN+ FG +P G + FIQ+ L Sbjct: 269 YILPATSLLFTNLVFKFGA--DGVPTAAKAGSPMTTAHIRNFIQL-----------TTFL 315 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ +++ FP+ L+ YW++S +++Q ++ + Sbjct: 316 SFPLIMY------FPSALLFYWTFSTGFTLLQSIILRQ 347 >gi|115757014|ref|XP_784750.2| PREDICTED: similar to Oxa1l protein [Strongylocentrotus purpuratus] gi|115961416|ref|XP_001176782.1| PREDICTED: similar to Oxa1l protein [Strongylocentrotus purpuratus] Length = 228 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 30/150 (20%) Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIY----KVISISLE-MRHAPFWGWIKDLAAADPT 471 Q K +++NPL ILLQ P+F + + ++ ++ +E M+ W W DL +DP Sbjct: 5 QFMKKNDVNPLKSFAGILLQAPIFISFFIGLRRMATLPVESMQTGGLW-WFTDLTTSDP- 62 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAM--ILNWMPVV 526 +Y P+I SLSMF+ M++ + Q M +L MP V Sbjct: 63 ----------YY--------ALPVIASLSMFLVMELGGEAGVSNAQAQKMRNVLRVMPFV 104 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + ++S P + YW SN S+ Q ++ Sbjct: 105 VLPFIASLPKAVFCYWLTSNFFSVFQVGLL 134 >gi|325831899|ref|ZP_08164996.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1] gi|325486220|gb|EGC88672.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1] Length = 639 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 26/202 (12%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+L TV +K++ PL+ ++ M I P+++ ++ K+ + +K + L K Sbjct: 1 MAILLFTVIIKIVLMPLSLWCQWNSIVMVKIMPELNRIKVKYFGDAEAIGEKQTL-LNKK 59 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 H+ +PL P+ QI V F + +VI H I D A P F G++P Sbjct: 60 HHYHPLLSLIPLAAQILVLFGLVEVI-------HG-----ITDHGA--PGTEF--LGMVP 103 Query: 482 FYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPAD--KGQAMILNWMPVVFVFALSSF- 534 G I P++ LS F Q +++P + K + N + +V L + Sbjct: 104 IEDGGLS--WIMPLLAGLSAVVMGFAQNRINPLQREQSKMEKNTTNGLSIVLSLVLGVYV 161 Query: 535 PAGLIIYWSWSNVISIVQQAVI 556 AG+ YW SN+++IV QA+ Sbjct: 162 AAGMAFYWICSNLMAIVVQALC 183 >gi|91095209|ref|XP_968413.1| PREDICTED: similar to cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Tribolium castaneum] gi|270015977|gb|EFA12425.1| hypothetical protein TcasGA2_TC001816 [Tribolium castaneum] Length = 436 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 42/230 (18%) Query: 345 PMFMLMSYFYNLVGNFGI----AIMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQ 393 P+ + + F L N G+ AI++ T+ +++ FPL + A M N IQ Sbjct: 139 PVGIAQTCFEYLHINLGVPWWEAIVIGTLVIRICLFPLVIIAQRNAAKMNNYMPQLQAIQ 198 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF----FAIYKVISI 449 K+ E R+ Q + ++ K +NPL L Q+PVF A+ ++ ++ Sbjct: 199 LKMTEARQSGNQLEVARYSQELMIFMKEKQLNPLKNMIVPLAQMPVFVSFFMALREMSNV 258 Query: 450 SLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 +E +R W W DL D + P+I S ++F +++ Sbjct: 259 PIESLRTGGLW-WFTDLTVPD-------------------QYFLMPLITSATLFATIELG 298 Query: 509 PPPADKG----QAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 A Q M +L +PV+ + +FP ++ YW SN IS++Q Sbjct: 299 TDTAKLSSQNLQTMKYVLRAVPVIVLPFTINFPGAILCYWVSSNFISLLQ 348 >gi|163814992|ref|ZP_02206379.1| hypothetical protein COPEUT_01145 [Coprococcus eutactus ATCC 27759] gi|158449675|gb|EDP26670.1| hypothetical protein COPEUT_01145 [Coprococcus eutactus ATCC 27759] Length = 444 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 4/93 (4%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKA 414 N + ++L T ++ FPL KQ S+ M IQP+I + +K+K Q Q+ Sbjct: 42 NLSVCVILFTFVLRGALFPLYFKQQRSSKIMSFIQPEIAKATKKYKGKTDQESMMKQQQE 101 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++ K + ++ +GC L+Q+P+F+ +Y+VI Sbjct: 102 TQKIQKKYGVSMASGCLTSLIQLPIFYGLYRVI 134 >gi|25029343|ref|NP_739397.1| putative inner membrane protein translocase component YidC [Corynebacterium efficiens YS-314] gi|259505655|ref|ZP_05748557.1| membrane protein OxaA [Corynebacterium efficiens YS-314] gi|38503027|sp|Q8FLS3|OXAA_COREF RecName: Full=Membrane protein oxaA gi|23494631|dbj|BAC19597.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259166737|gb|EEW51291.1| membrane protein OxaA [Corynebacterium efficiens YS-314] Length = 397 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 41/236 (17%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 I++ + V+ + P K Y S I+PK + E+FK + + M Q YK Sbjct: 34 ISLFGLVITVRAIIAPFTWKMYKSGRLTAQIRPKRVAIAEEFKGRHDEDSIREMQQKYKD 93 Query: 422 HN----INPLAGCWPILLQIPVFFAIYKVISISLEMRHA---PFWGWIKDLAAAD----- 469 N INP AGC P L+QIPV +Y+V+ + P I L+A + Sbjct: 94 LNKEYGINPFAGCVPTLIQIPVILGLYQVLLLMARPEGGLENPVPRSIGFLSAEEVQSFL 153 Query: 470 ---------------PTNIFTLFG-----ILPFYLPGFMHVGIWPII-MSLSMFIQMKMS 508 P T G +L F LP F+ ++ M+LS + ++ + Sbjct: 154 QGRVFNVPLPAYVTMPAEQLTFLGTTREDVLSFVLPLFIVAAVFTAFNMALSTYRNIQTN 213 Query: 509 PPPADKGQAMI--LNWMPVV-----FVFALSS-FPAGLIIYWSWSNVISIVQQAVI 556 ++ M W+ V+ V L+ FP + +YW +N+ + Q A++ Sbjct: 214 DYASNISNGMFKAFLWLAVLAPLFPLVLGLTGPFPTAIALYWVANNLWTFGQTAIM 269 >gi|329314775|gb|AEB89188.1| Membrane protein oxaA [Staphylococcus aureus subsp. aureus T0131] Length = 284 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 111/232 (47%), Gaps = 34/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 G+FY PM ++ + N L N+G+AI++ + ++++ P K ++ M Sbjct: 30 GFFYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKM 89 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P++++++EK K++ Q + A ++Q+YK +++NP+ GC P+L+Q+P+ Sbjct: 90 KVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W DL D I + G+L F + Sbjct: 150 LYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ K P + M++ P++ ++ S + L +YWS S +VQ Sbjct: 192 AYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQ 243 >gi|197294709|ref|YP_001799250.1| Preprotein translocase subunit YidC [Candidatus Phytoplasma australiense] gi|171854036|emb|CAM12009.1| Preprotein translocase subunit YidC [Candidatus Phytoplasma australiense] Length = 471 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 36/233 (15%) Query: 352 YFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQ 409 YF++ + G+ I+LTT+ + L +P+ K T NM IQP+I+++++K+ QS P Sbjct: 235 YFFSYPFASLGLGIILTTILFRTLTWPIYTKTTTFTMNMNLIQPEIEKVKQKYALQSDPA 294 Query: 410 VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVISISL---------EMRHAPF 458 QK +++ K + N + G LQ+P+F +I + + + ++ PF Sbjct: 295 SAQKMQLEILKVYRKNNFSFWGFLVSFLQLPLFISINQTLGRFIVPGGIFETDKLIEKPF 354 Query: 459 WGWIKDLAAADPTNIFT------LFGILPFYL-------PGFMHVGIWPIIMSLSMFIQM 505 G+IK P + F L G+ F+L P ++ + + ++ Sbjct: 355 LGFIK---FNQPNHWFVVSLLSFLVGLTMFFLNKVSFKKPDYLKKP------THHLTLEQ 405 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K ++K I++W ++ + S L +YW N +I Q + K Sbjct: 406 KEKAKQSEKTMK-IMSWFMILMMVLFSCSNPILSLYWIVGNTYTIFQTLITRK 457 >gi|238926050|ref|YP_002939568.1| stage III sporulation protein J [Eubacterium rectale ATCC 33656] gi|238877727|gb|ACR77434.1| stage III sporulation protein J [Eubacterium rectale ATCC 33656] Length = 442 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 15/143 (10%) Query: 342 IAKPMFMLMSYFY----NLVGNFGIAIMLTTVFVK----LLFFPLAKKQYVSTANMKNIQ 393 IAK + +LM + Y N+ G +++L+ V + + PL KQ + + +Q Sbjct: 21 IAKLLGILMDWIYSGISNITGGRVESVVLSIVIITIIIYMCLLPLTIKQQKFSKLSQKMQ 80 Query: 394 PKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKV--- 446 P++ ++ K+K Q AM + LY+ + I+P+ C +L+Q+P+ FA+Y+V Sbjct: 81 PEMQAIQAKYKNKKDQASMMAMQEETQLLYQKYGISPMGSCVQMLIQMPILFALYRVFYN 140 Query: 447 ISISLEMRHAPFWGWIKDLAAAD 469 I L F G + + D Sbjct: 141 IPAYLSGVKGSFTGLVDQIKGVD 163 >gi|328948334|ref|YP_004365671.1| 60 kDa inner membrane insertion protein [Treponema succinifaciens DSM 2489] gi|328448658|gb|AEB14374.1| 60 kDa inner membrane insertion protein [Treponema succinifaciens DSM 2489] Length = 905 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 26/206 (12%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----PKIDELREKFKQSPPQVL 411 L+ N G +++ ++ V LL PL +NIQ P++D +++ FK ++ Sbjct: 27 LLKNTGFSLVGVSLAVSLLTLPLYAVAEHWQEIERNIQAKMKPQVDRIKKVFKGDEQYMI 86 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRHAPFWGWIKDLAAAD 469 + H I L + IL+QIP F A Y +S +L+ H F I DL D Sbjct: 87 LSTYYRQNHYHPIMSLRSAFGILIQIPFFTAAYTCLSHMPALQNHHLFF---IADLGKPD 143 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVV 526 LF I G V I PI+M++ I + P DK Q +L + VV Sbjct: 144 -----ALFSI------GSFSVNILPILMTVINCISGAIYTKGLPLKDKFQVYLLALLFVV 192 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQ 552 L + P+GL+IYW+ +N+ S+V+ Sbjct: 193 ---LLYNSPSGLVIYWTMNNIFSLVK 215 >gi|306830170|ref|ZP_07463354.1| SpoIIIJ family protein [Streptococcus mitis ATCC 6249] gi|304427696|gb|EFM30792.1| SpoIIIJ family protein [Streptococcus mitis ATCC 6249] Length = 312 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 24/189 (12%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 ++P L+E Q Q+A+ K H I+ L G C+PIL+Q+P F AIY + Sbjct: 103 LEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMLGGVGCFPILIQMPFFSAIYFAAQL 162 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV-GIWPIIMSLSMFIQMKMS 508 + + + F G DL + P+ I F + +YL + + G+ + + + MS Sbjct: 163 TEGVASSTFLGI--DLGS--PSMILVAFAGILYYLQSILSLHGVEDEMQREQLKKMIYMS 218 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P M VVF F PA + +YW + I+QQ ++ + L Sbjct: 219 P------------LMIVVFSF---FSPASVTLYWVVGGFMMILQQFIVNYV--VRPKLRK 261 Query: 569 RLRSTFSKN 577 ++R F+KN Sbjct: 262 KVREEFAKN 270 >gi|83319450|ref|YP_424810.1| putative inner membrane protein translocase component YidC [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|1176889|sp|P43042|OXAA_MYCCT RecName: Full=Membrane protein oxaA gi|416240|dbj|BAA03620.1| orf R3 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283336|gb|ABC01268.1| membrane protein oxaA [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 388 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 76/321 (23%), Positives = 134/321 (41%), Gaps = 64/321 (19%) Query: 285 YQAKFSANEITILPGKSITTTNFLF-----AGAKEFPTIHHYEKDLAIPRFE----MLID 335 YQA++S N+I + GKS+ T F + ++ +HH+ D FE + Sbjct: 47 YQAQYSVNQIVDMTGKSVYTPGVSFEIILSSLGEQGSKVHHFVYDKG-SFFEYGYNAITS 105 Query: 336 W------------GWFYF----IAKPMFMLMSYFYNLVGN------FGI----AIMLTTV 369 W G+F + I M L S N + + +GI AI LTT+ Sbjct: 106 WKETFKLTQSPFYGFFVYPTAWILAGMIKLFSGTLNPLLDKSSQLTYGISSIFAIFLTTL 165 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQVLQKAMIQ---LYKTHNIN 425 +K + K ++ M++IQ K+ +++ K+K + Q QK ++ LYK N++ Sbjct: 166 LIKGITLSFGWKSQINQEKMQDIQLKVADIQAKYKDKKDMQSKQKQQLEIQALYKKENMS 225 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW------GWIKDLAAADPTNIFTLFGI 479 + +P FAIY ++ + ++ A G + + A + I L Sbjct: 226 QFSALAGSFAPLPFLFAIYAIVRSTRALKIASVGPIALIEGPWQQITAGNYIYIIILAIY 285 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKM--------SPPPADKGQAMILNWMPVVFVFAL 531 LP + + M L +QMK + + K Q ++ M VF+ + Sbjct: 286 LP----------LQAVSMLLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVMMFVFIIII 335 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 S G+ IYW +S+++ I+Q Sbjct: 336 VSVATGVCIYWIFSSILQIIQ 356 >gi|298246693|ref|ZP_06970498.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter racemifer DSM 44963] gi|297549352|gb|EFH83218.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter racemifer DSM 44963] Length = 296 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 58/108 (53%), Gaps = 1/108 (0%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F + Y +G+F +A+++ TV + +L PL +Q + +QP+I LR ++ Sbjct: 15 PIFNALLLLYAWLGDFSLALVVLTVSISVLLLPLTLRQIRQGRITRRLQPEIQALRRRYA 74 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 S +A+ +LYK + I + +L+Q P++ +Y +++ L+ Sbjct: 75 -SDRLAQTRALQELYKAYGIRTSSTFLLLLIQAPIYSGLYFALNMILQ 121 >gi|194868587|ref|XP_001972309.1| GG13956 [Drosophila erecta] gi|190654092|gb|EDV51335.1| GG13956 [Drosophila erecta] Length = 441 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 42/213 (19%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAMI 416 I + T+ V+ + FPL ++A M N +Q K+ E R+ + M+ Sbjct: 156 IAIGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQMLQLKMTEARQSGNAIESARYAQEMM 215 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAAD 469 + +NPL L Q P+F + + + +M +AP W DL AD Sbjct: 216 LFMREKGVNPLKNMVVPLAQAPLFISFFMGLR---QMANAPVESMRDGGLFWFTDLTLAD 272 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MILNWM 523 P FYL P+I S ++++ +++ A A +L + Sbjct: 273 P-----------FYL--------LPLITSATLYLTIEIGTDSARLSAANMNTMKYVLRAL 313 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P+V +FPA ++ YW+ SN IS+ Q AV+ Sbjct: 314 PIVIFPFTMNFPAAILTYWACSNFISLGQVAVL 346 >gi|172041701|ref|YP_001801415.1| putative inner membrane protein translocase component YidC [Corynebacterium urealyticum DSM 7109] gi|171853005|emb|CAQ05981.1| preprotein translocase YidC subunit [Corynebacterium urealyticum DSM 7109] Length = 324 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 7/92 (7%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 + ++I+ V +++L Q S+ M+ QPK+ EL+ K+ QK M+++ Sbjct: 31 TWALSIVFLVVTIRILLVKPTANQLRSSRKMQEFQPKMKELQRKYANDQ----QKLMVEV 86 Query: 419 YKTH---NINPLAGCWPILLQIPVFFAIYKVI 447 K + P+A C P+L+Q+P+F ++ V+ Sbjct: 87 RKAQQEMGVRPMAACLPMLVQMPIFIGLFHVL 118 >gi|161510304|ref|YP_001575963.1| hypothetical protein USA300HOU_2087 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|160369113|gb|ABX30084.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] Length = 251 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/207 (23%), Positives = 100/207 (48%), Gaps = 31/207 (14%) Query: 359 NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 N+G+AI++ + ++++ P K ++ MK +P++++++EK K++ Q + A Sbjct: 16 NYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKVAKPEVEKIQEKVKRARTQEEKMA 75 Query: 415 ----MIQLYKTHNINPLA---GCWPILLQIPVFFAIYKVISISL--EMRHAPFWGWIKDL 465 ++Q+YK +++NP+ GC P+L+Q+P+ +Y V+ L + P + W DL Sbjct: 76 ANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLYFVLKDQLVDGLFKYPHFLWF-DL 134 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 D I + G+L F + ++ K P + M++ P+ Sbjct: 135 GRPD-IWITIIAGVLYF----------------IQAYVSSKTMPDEQRQMGYMMMVISPI 177 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ S + L +YWS S +VQ Sbjct: 178 MIIWISLSSASALGLYWSVSAAFLVVQ 204 >gi|283471308|emb|CAQ50519.1| membrane protein OxaA [Staphylococcus aureus subsp. aureus ST398] Length = 290 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 111/232 (47%), Gaps = 34/232 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 G+FY PM ++ + N L N+G+AI++ + ++++ P K ++ M Sbjct: 30 GFFYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKM 89 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P++++++EK K++ Q + A ++Q+YK +++NP+ GC P+L+Q+P+ Sbjct: 90 KVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W DL D I + G+L F + Sbjct: 150 LYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ K P + M++ P++ ++ S + L +YWS S +VQ Sbjct: 192 AYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQ 243 >gi|256084614|ref|XP_002578522.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Schistosoma mansoni] gi|238663899|emb|CAZ34760.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial), putative [Schistosoma mansoni] Length = 304 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 17/131 (12%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQKAM 415 AI +T+ +++ FP+ +Q A NI P++ L+E ++ + M Sbjct: 123 AIAASTILIRMCMFPVMVRQRRHLAEYTNIIPQVTVLQESLTRARLSGNYVEMMRTSEKM 182 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYK----VISISLEMRHAPFWGWIKDLAAADPT 471 QL K +N+NPL + LQ P+F ++ ++++ + W DL A+DP Sbjct: 183 SQLMKNNNLNPLNTFKYVFLQAPIFLGVFTGIRGLVNLPVTSLQTGGTAWFTDLTASDP- 241 Query: 472 NIFTLFGILPF 482 + ILPF Sbjct: 242 -----YCILPF 247 >gi|219111225|ref|XP_002177364.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411899|gb|EEC51827.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 229 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 32/213 (15%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ--SPPQVLQ---- 412 +G +I+ TV ++L FP+ +++ M ++QP++ +++ +++ +P + Q Sbjct: 11 EYGWSIVGVTVILRLCLFPVMVASQQTSSRMAHLQPELQQIKARYEALGTPSRQDQLQFS 70 Query: 413 ---KAMIQLYKTHNINPLAGCWPILLQIPV----FFAIYKVISISLEMRHAPFWGWIKDL 465 KA+ YK AG P+ +Q+P+ FF + K+ SI E W DL Sbjct: 71 GQMKAIFAKYKVKPFRAFAG--PV-IQMPLFMGMFFGLRKMPSIFPEELSTGGMYWFTDL 127 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI--LNWM 523 A+DP I L F ++L + +M A G M+ M Sbjct: 128 TASDPLYILPFTSALSF--------------LALIELGKEQMVAQNAQSGHLMVNFFRVM 173 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + V +F A ++ YW+ +N +++ Q A++ Sbjct: 174 SIGMVPVCVNFEAAMLCYWTSNNFMTLTQTAIL 206 >gi|253581091|ref|ZP_04858351.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847627|gb|EES75597.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 429 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 75/147 (51%), Gaps = 15/147 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW I ++ L++ F + N GI I++ ++ + L PL KQ + +QP++ Sbjct: 20 GW---IMDGIYRLLNIFG--IQNIGICIVIFSILIYALMTPLQIKQQKFSKLSAIMQPEL 74 Query: 397 DELREKFK-----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++++K+K + Q +Q+ +Y+ + ++P C + +Q P+ A+Y+VI Sbjct: 75 QKIQKKYKGKNNDTAAMQKMQEETQAVYQKYGVSPTGSCVQLAIQFPILMALYQVI---- 130 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFG 478 + + G ++D+ A+ T+I + G Sbjct: 131 -YKIPAYVGSVRDILASAVTSITGVNG 156 >gi|227487666|ref|ZP_03917982.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51867] gi|227541375|ref|ZP_03971424.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51866] gi|227092360|gb|EEI27672.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51867] gi|227182926|gb|EEI63898.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51866] Length = 321 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 52/89 (58%), Gaps = 1/89 (1%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 + ++I++ T V+ L S M+ +QPK+ ++EK+K +P +++++ ++ Sbjct: 31 TWALSIVMLTFTVRALLLKPTMNSMRSMRKMQILQPKMQAIQEKYKNNPEKMMEETR-RV 89 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVI 447 K +P+ GC P+L+Q+PVF ++ V+ Sbjct: 90 QKEVGASPVKGCLPMLVQMPVFIGLFHVL 118 >gi|225619513|ref|YP_002720770.1| inner membrane protein [Brachyspira hyodysenteriae WA1] gi|225214332|gb|ACN83066.1| inner membrane protein [Brachyspira hyodysenteriae WA1] Length = 996 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 16/200 (8%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----PKIDELREKFKQSPPQVLQKAMI 416 G+++ L ++ + L PL A + IQ P ID ++ +K +L + Sbjct: 34 GMSLFLLSLCINFLSLPLYNIAESWQAKERAIQDKMKPMIDNIKAVYKGDQRYLLIRTCQ 93 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 ++ I G +L+QIP F A Y + SL + + +IKDL+ D L Sbjct: 94 RINGYKTIYAFRGTLGLLIQIPFFIAAYNFVH-SLTGLNGQSFLFIKDLSKPDA-----L 147 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 I G + + + P +M+L + + +++ L + ++F+ L + P+ Sbjct: 148 IKI------GNISINLLPFLMTLFSLLAGFVYARKLKLKESLPLYAVSLIFLVLLYTSPS 201 Query: 537 GLIIYWSWSNVISIVQQAVI 556 GL+ YW+ + + S ++ +I Sbjct: 202 GLLFYWTINCLFSFIKNIII 221 >gi|325696358|gb|EGD38249.1| SpoIIIJ family protein [Streptococcus sanguinis SK160] Length = 296 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 32/214 (14%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 I +PM + +F G +G+AI++ T+ V+++ PL K + + M +P Sbjct: 29 IGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYFKPIF 88 Query: 397 DELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISIS 450 ++E+ K + Q + +A +L N L+ GC P+L+Q+P F A++ + Sbjct: 89 APIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFAAQYT 148 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV-GIWPIIMSLSMFIQMKMSP 509 + + F WIKDLA +D + + GIL +Y+ + + GI SM MSP Sbjct: 149 QGVAGSSFL-WIKDLAKSD-LALTAIVGIL-YYIQSVLSLHGIEDETQRNSMKQASYMSP 205 Query: 510 PPADKGQAMILNWMPVVFVFALSSF-PAGLIIYW 542 + + S F PA + +YW Sbjct: 206 ----------------IMIVGFSFFSPAAVTLYW 223 >gi|310800716|gb|EFQ35609.1| YidC/Oxa1 family membrane protein insertase [Glomerella graminicola M1.001] Length = 476 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 39/208 (18%) Query: 363 AIMLTTVFVKLLFF-PLAKKQYVSTANMKNIQ--PKIDELREKFKQSPPQVLQKAMIQLY 419 +I T + ++L+ F PL Q S A M+ +Q PK +E+R+ +++ + AM ++ Sbjct: 176 SIAATGILLRLVMFKPLLMAQETS-ARMQKLQQNPKYEEVRKGVQEAMSRGDTAAMTEMR 234 Query: 420 -------KTHNINPLAGCWPILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAA 468 K +NPL G W LLQIP + +++V+ +I + + W+ DL + Sbjct: 235 RDLSVMNKNAGVNPLKGLWG-LLQIPFGYGMFRVLNGAAAIPVPGMETGGFLWVSDLTVS 293 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM----SPPPADKGQAMILNWMP 524 DP +F L PI L+MF +K+ + P A Q +++ + Sbjct: 294 DP--LFLL-----------------PIAGPLAMFAMVKLGSRYATPQAKAQQKLMMYILG 334 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + V + PAG+ Y+ + + + Q Sbjct: 335 PISVIFTAYLPAGVQWYFFVAGAVGVFQ 362 >gi|195493250|ref|XP_002094335.1| GE20254 [Drosophila yakuba] gi|194180436|gb|EDW94047.1| GE20254 [Drosophila yakuba] Length = 441 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 42/213 (19%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAMI 416 I + T+ V+ + FPL ++A M N +Q K+ E R+ + M+ Sbjct: 156 IAIGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQMLQLKMTEARQSGNAIESARYAQEMM 215 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAAD 469 + +NPL L Q P+F + + + +M +AP W DL AD Sbjct: 216 LFMREKGVNPLKNMVVPLAQAPLFISFFMGLR---QMANAPVESMRDGGLFWFTDLTLAD 272 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MILNWM 523 P FYL P+I S ++++ +++ A A +L + Sbjct: 273 P-----------FYL--------LPMITSATLYLTIEIGTDSARLSAANMNTMKYVLRAL 313 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P+V +FPA ++ YW+ SN IS+ Q AV+ Sbjct: 314 PIVIFPFTMNFPAAILTYWACSNFISLGQVAVL 346 >gi|150864659|ref|XP_001383584.2| hypothetical protein PICST_57776 [Scheffersomyces stipitis CBS 6054] gi|149385915|gb|ABN65555.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 335 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 47/204 (23%), Positives = 98/204 (48%), Gaps = 30/204 (14%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP-PQ---VLQKAMIQLY 419 I++ T+ V++ FP K + A ++P++D+ + + PQ V +A ++ Sbjct: 80 IVVVTIAVRVALFPFYMKASANVARTAKVKPQLDQALADLRAAETPQEQYVAMQARKKVM 139 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAADPTN 472 K +NI+ A PIL Q+P+ + ++ + +M + P G W +DLA+ DP Sbjct: 140 KDNNISMTAQMAPIL-QLPLAYGFFQALR---KMANYPVEGFSTGGIYWFEDLASVDP-- 193 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 L GI + + +G +M+ P + I +P++ +F Sbjct: 194 YLGLQGIAAAVIIAVVRLG--------GETGSHQMAKPMKN-----IFTVVPLISIFITK 240 Query: 533 SFPAGLIIYWSWSNVISIVQQAVI 556 +F A +++Y++ ++V+S++Q +V+ Sbjct: 241 NFSAAVVLYFAVNSVVSLIQSSVL 264 >gi|256392377|ref|YP_003113941.1| hypothetical protein Caci_3193 [Catenulispora acidiphila DSM 44928] gi|256358603|gb|ACU72100.1| 60 kDa inner membrane insertion protein [Catenulispora acidiphila DSM 44928] Length = 243 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 7/97 (7%) Query: 356 LVGNFG--IAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKIDELREKFKQSPPQ 409 ++G G +AI++ T V+L PL + Q S + P + +L+ K+K+ P + Sbjct: 28 VLGGLGPAVAIVMFTAAVRLCLHPLNRAQMNSQLASQEQRTALAPAVQKLQRKYKKDPAR 87 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 Q+ ++LY+ + + G L+QIPVFF +Y++ Sbjct: 88 A-QRETLELYRANGVKLAPGIGLGLVQIPVFFVVYRL 123 >gi|291526550|emb|CBK92137.1| Preprotein translocase subunit YidC [Eubacterium rectale DSM 17629] Length = 438 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 12/117 (10%) Query: 342 IAKPMFMLMSYFY----NLVGNFGIAIMLTTVFVK----LLFFPLAKKQYVSTANMKNIQ 393 IAK + +LM + Y N+ G +++L+ V + + PL KQ + + +Q Sbjct: 17 IAKLLGILMDWIYSGISNITGGRVESVVLSIVIITIIIYMCLLPLTIKQQKFSKLSQKMQ 76 Query: 394 PKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKV 446 P++ ++ K+K Q AM + LY+ + I+P+ C +L+Q+P+ FA+Y+V Sbjct: 77 PEMQAIQAKYKNKKDQASMMAMQEETQLLYQKYGISPMGSCVQMLIQMPILFALYRV 133 >gi|242040481|ref|XP_002467635.1| hypothetical protein SORBIDRAFT_01g031260 [Sorghum bicolor] gi|241921489|gb|EER94633.1| hypothetical protein SORBIDRAFT_01g031260 [Sorghum bicolor] Length = 420 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 21/203 (10%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA---MIQLY 419 I LTT+ ++ PL Q +T ++ I P+++ ++++ P+ Q+ M L+ Sbjct: 153 CIALTTLIIRSATIPLLVNQLKATTKLRAINPEMEAIKDQMNSMDPKSAQEGQAKMKALF 212 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG----WIKDLAAADPTNIFT 475 K H ++P +L+Q P+F + Y IS +E + F G W DL D + Sbjct: 213 KKHGVSPFTPMKGLLIQGPMFMSFYFAISNMVE-KVPSFKGGGALWFTDLTTPDSLYVLP 271 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 + L F ++++ + +Q M P M V+ V +F Sbjct: 272 VLTGLTF-------------LVTVELNLQEGMEGNPMAGKMKTFSRGMAVLTVPFTMNFA 318 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 + YW SN+ +++ VI + Sbjct: 319 KAIFCYWITSNIFTLLYGIVIRR 341 >gi|153815419|ref|ZP_01968087.1| hypothetical protein RUMTOR_01654 [Ruminococcus torques ATCC 27756] gi|145847278|gb|EDK24196.1| hypothetical protein RUMTOR_01654 [Ruminococcus torques ATCC 27756] Length = 441 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 9/122 (7%) Query: 335 DWGWFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 DW ++ + +M+ YN + N G+AI++ T+ V L PL KQ T Sbjct: 13 DWPIIKQVSWLLGQVMNGIYNALSAIGIENIGVAIIVFTIIVYTLLLPLTIKQQKFTKMS 72 Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 +QP+I ++++++ Q Q+ M +Y + + +GC P LLQ+ F +Y Sbjct: 73 AVMQPEIQKIQKRYANKKDQASMLKQQEEMNMVYDKYGLKMSSGCLPSLLQLVFLFGLYP 132 Query: 446 VI 447 V+ Sbjct: 133 VV 134 >gi|317500881|ref|ZP_07959093.1| hypothetical protein HMPREF1026_01036 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089217|ref|ZP_08338119.1| hypothetical protein HMPREF1025_01702 [Lachnospiraceae bacterium 3_1_46FAA] gi|316897761|gb|EFV19820.1| hypothetical protein HMPREF1026_01036 [Lachnospiraceae bacterium 8_1_57FAA] gi|330405769|gb|EGG85298.1| hypothetical protein HMPREF1025_01702 [Lachnospiraceae bacterium 3_1_46FAA] Length = 441 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 9/122 (7%) Query: 335 DWGWFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 DW ++ + +M+ YN + N G+AI++ T+ V L PL KQ T Sbjct: 13 DWPIIKQVSWLLGQVMNGIYNALSAIGIENIGVAIIVFTIIVYTLLLPLTIKQQKFTKMS 72 Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 +QP+I ++++++ Q Q+ M +Y + + +GC P LLQ+ F +Y Sbjct: 73 AVMQPEIQKIQKRYANKKDQASMLKQQEEMNMVYDKYGLKMSSGCLPSLLQLVFLFGLYP 132 Query: 446 VI 447 V+ Sbjct: 133 VV 134 >gi|195326627|ref|XP_002030027.1| GM24796 [Drosophila sechellia] gi|194118970|gb|EDW41013.1| GM24796 [Drosophila sechellia] Length = 441 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 30/207 (14%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAMI 416 I + T+ V+ + FPL ++A M N +Q K+ E R+ + M+ Sbjct: 156 IAIGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQMLQLKMTEARQSGNAIESARYAQEMM 215 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAAD 469 + +NPL L Q P+F + + + +M +AP W DL AD Sbjct: 216 LFMREKGVNPLKNMVVPLAQAPLFISFFMGLR---QMANAPVESMRDGGLFWFTDLTMAD 272 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P + L YL + +G +S + MK +L +P+V Sbjct: 273 PYYLLPLITSATLYL--TIEIGTDSARLSAANMNTMKY-----------VLRALPIVIFP 319 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 +FPA ++ YW+ SN IS+ Q AV+ Sbjct: 320 FTMNFPAAILTYWACSNFISLGQVAVL 346 >gi|291529192|emb|CBK94778.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Eubacterium rectale M104/1] Length = 438 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 12/117 (10%) Query: 342 IAKPMFMLMSYFY----NLVGNFGIAIMLTTVFVK----LLFFPLAKKQYVSTANMKNIQ 393 IAK + +LM + Y N+ G +++L+ V + + PL KQ + + +Q Sbjct: 17 IAKLLGILMDWIYSGISNITGGRVESVVLSIVIITIIIYMCLLPLTIKQQKFSKLSQKMQ 76 Query: 394 PKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKV 446 P++ ++ K+K Q AM + LY+ + I+P+ C +L+Q+P+ FA+Y+V Sbjct: 77 PEMQAIQAKYKNKKDQASMMAMQEETQLLYQKYGISPMGSCVQMLIQMPILFALYRV 133 >gi|324993653|gb|EGC25572.1| SpoIIIJ family protein [Streptococcus sanguinis SK405] gi|324995035|gb|EGC26948.1| SpoIIIJ family protein [Streptococcus sanguinis SK678] gi|327462922|gb|EGF09243.1| SpoIIIJ family protein [Streptococcus sanguinis SK1] gi|327474526|gb|EGF19931.1| SpoIIIJ family protein [Streptococcus sanguinis SK408] Length = 307 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 13/150 (8%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 I +PM + +F G +G+AI++ T+ V+++ PL K + + M +P Sbjct: 40 IGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYFKPIF 99 Query: 397 DELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISIS 450 ++E+ K + Q + +A +L N L+ GC P+L+Q+P F A++ + Sbjct: 100 APIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFAAQYT 159 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 + + F WIKDLA +D + + GIL Sbjct: 160 QGVAGSSFL-WIKDLAKSD-LALTAIVGIL 187 >gi|291319996|ref|YP_003515254.1| hypothetical protein MAGa0630 [Mycoplasma agalactiae] gi|290752325|emb|CBH40296.1| Conserved hypothetical protein [Mycoplasma agalactiae] Length = 715 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 14/180 (7%) Query: 389 MKNIQPKIDELREKFKQSPPQVL--QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 +K+ + KID FK + Q+ + +LYK H INPL +++ +PVF +++V Sbjct: 523 LKSKKAKIDAKYADFKNNKQMKARQQQEVAELYKKHGINPLDAFVTMIISLPVFIMMWRV 582 Query: 447 ISISLEMRHAPFWG-------WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 I E + + G W + + + + G+L P I++ Sbjct: 583 IQSLPEFKSTVWLGLSFAETSWRRLFFSGE----WQYLGLLVVVAAVQGVAQFLPQILNR 638 Query: 500 SMFIQ-MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F + + A K M +VF F F AGL +YW S + +I+Q I K Sbjct: 639 KKFKERTSLEEEKALKKANRTQRIMTIVFFFITLIFSAGLQVYWIISGIWTIIQTLSIHK 698 >gi|300789488|ref|YP_003769779.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei U32] gi|299799002|gb|ADJ49377.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei U32] Length = 214 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI++ T+ V+LL PLA+ + P+I LREK + + L M +L + Sbjct: 27 LAIVVFTLGVRLLLHPLARSAARGERARTALLPEITALREKHGRDRER-LAAEMTKLQQE 85 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISIS 450 + GC P+LLQ+P F +Y++ + + Sbjct: 86 SGTSLFVGCLPMLLQLPFFMVMYRLFTTA 114 >gi|325690943|gb|EGD32943.1| SpoIIIJ family protein [Streptococcus sanguinis SK115] Length = 307 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 13/150 (8%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 I +PM + +F G +G+AI++ T+ V+++ PL K + + M +P Sbjct: 40 IGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYFKPIF 99 Query: 397 DELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISIS 450 ++E+ K + Q + +A +L N L+ GC P+L+Q+P F A++ + Sbjct: 100 APIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFAAQYT 159 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 + + F WIKDLA +D + + GIL Sbjct: 160 QGVAGSSFL-WIKDLAKSD-LALTAIVGIL 187 >gi|15241690|ref|NP_201011.1| OXA1; P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] gi|38372434|sp|Q42191|OXA1_ARATH RecName: Full=Mitochondrial inner membrane protein OXA1; AltName: Full=Oxidase assembly 1 protein; Short=AtOXA1; Flags: Precursor gi|2462077|emb|CAA72619.1| Oxa1 protein [Arabidopsis thaliana] gi|6624207|dbj|BAA88473.1| AtOXA1 [Arabidopsis thaliana] gi|10176922|dbj|BAB10166.1| Oxa1 protein [Arabidopsis thaliana] gi|21618094|gb|AAM67144.1| AtOXA1 [Arabidopsis thaliana] gi|22655115|gb|AAM98148.1| AtOXA1 [Arabidopsis thaliana] gi|30387505|gb|AAP31918.1| At5g62050 [Arabidopsis thaliana] gi|332010172|gb|AED97555.1| mitochondrial inner membrane protein OXA1 [Arabidopsis thaliana] Length = 429 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 33/210 (15%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL-----QKAMIQ 417 +I++ T+ ++ PL KQ T + ++P+++ +RE+ + + QK M Sbjct: 155 SIVVATILIRSSTVPLLIKQMKDTTKLALMRPRLESIREEMQNKGMDSVTMAEGQKKMKN 214 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---WIKDLAAADPTNIF 474 L+K + + P + +Q P+F + I E + G W DL D Sbjct: 215 LFKEYGVTPFTPMKGMFIQGPLFICFFLAIRNMAEKVPSFQTGGALWFTDLTTPD----- 269 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL--- 531 +L+ I P+I L+ I ++ + +G M V VFAL Sbjct: 270 SLY--------------ILPVITGLTFLITVECNAQEGMEGNPMAGTVKTVCRVFALLTV 315 Query: 532 ---SSFPAGLIIYWSWSNVISIVQQAVIMK 558 SFP + YW SN+ S++ VI + Sbjct: 316 PMTMSFPQAIFCYWITSNLFSLMYGLVIKR 345 >gi|332638886|ref|ZP_08417749.1| 60 kDa inner membrane protein [Weissella cibaria KACC 11862] Length = 314 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 67/133 (50%), Gaps = 13/133 (9%) Query: 341 FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQY----VSTANMKNIQ 393 F+ P+ M + +G G +I++ T V+L+ P+ Q + M+ +Q Sbjct: 25 FLEGPLTSFMHMSEDWIGGTNAVGWSIVILTFVVRLILLPMMIHQQRGATIQQEKMRLLQ 84 Query: 394 PKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGC--WPILLQIPVFFAIYKVI 447 P++ +++E K + Q + +AM+ +Y+ + ++ L G +++Q PVF +Y I Sbjct: 85 PQMSKIQEAQKTAQTQEEKMLASQAMMAVYRENGVSMLGGMNFATLIIQWPVFMGLYAAI 144 Query: 448 SISLEMRHAPFWG 460 S E+ HA F+G Sbjct: 145 KNSHEIAHATFFG 157 >gi|327490082|gb|EGF21870.1| SpoIIIJ family protein [Streptococcus sanguinis SK1058] Length = 307 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 13/150 (8%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 I +PM + +F G +G+AI++ T+ V+++ PL K + + M +P Sbjct: 40 IGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYFKPIF 99 Query: 397 DELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISIS 450 ++E+ K + Q + +A +L N L+ GC P+L+Q+P F A++ + Sbjct: 100 APIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFAAQYT 159 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 + + F WIKDLA +D + + GIL Sbjct: 160 QGVAGSSFL-WIKDLAKSD-LALTAIVGIL 187 >gi|185178696|ref|ZP_02964517.1| membrane protein OxaA [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|184209286|gb|EDU06329.1| membrane protein OxaA [Ureaplasma urealyticum serovar 5 str. ATCC 27817] Length = 383 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 94/195 (48%), Gaps = 18/195 (9%) Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQ---LYKTHNINPLAGCWPI 433 ++ + + T + IQ KI E+ K+K + Q QK ++ LY+ HN+ PLA + Sbjct: 166 ISARATIQTERISEIQGKIAEINAKYKDAKDMQSRQKKQMETKELYQKHNVKPLAPFESM 225 Query: 434 LLQIPVFFAIYKVISISLEMRH-APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 ++ +P+F IY+V++I ++ + F+ W DL+A + IF+ F + F+ + I Sbjct: 226 IITLPIFLIIYRVVTILRPLKFISIFYIW--DLSATPISEIFSNFTTSGWPYIFFLLIII 283 Query: 493 WPIIMS--LSMFIQMKMSPPPADKGQA---------MILNWMPVVFVFALSSFPAGLIIY 541 I+S + + K + G M N + +V ++ +G+ +Y Sbjct: 284 PVQILSQKIPQLLAKKQNRSATTVGAKNKQQLKRVRMTQNIIAIVLAVVVAISASGIGLY 343 Query: 542 WSWSNVISIVQQAVI 556 W ++ + +I+Q +I Sbjct: 344 WFFNAIFTILQSYII 358 >gi|148377328|ref|YP_001256204.1| putative inner membrane protein translocase component YidC [Mycoplasma agalactiae PG2] gi|148291374|emb|CAL58757.1| Conserved hypothetical protein [Mycoplasma agalactiae PG2] Length = 715 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 14/180 (7%) Query: 389 MKNIQPKIDELREKFKQSPPQVL--QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 +K+ + KID FK + Q+ + +LYK H INPL +++ +PVF +++V Sbjct: 523 LKSKKAKIDAKYADFKNNKQMKARQQQEVAELYKKHGINPLDAFVTMIISLPVFIMMWRV 582 Query: 447 ISISLEMRHAPFWG-------WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 I E + + G W + + + + G+L P I++ Sbjct: 583 IQSLPEFKSTVWLGLSFAETSWRRLFFSGE----WQYLGLLVVVAAVQGVAQFLPQILNR 638 Query: 500 SMFIQ-MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F + + A K M +VF F F AGL +YW S + +I+Q I K Sbjct: 639 KKFKERTSLEEEKALKKANRTQRIMTIVFFFITLIFSAGLQVYWIISGIWTIIQTLSIHK 698 >gi|125718591|ref|YP_001035724.1| OxaA-like protein precursor [Streptococcus sanguinis SK36] gi|125498508|gb|ABN45174.1| Preprotein translocase subunit YidC, putative [Streptococcus sanguinis SK36] Length = 307 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 13/150 (8%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 I +PM + +F G +G+AI++ T+ V+++ PL K + + M +P Sbjct: 40 IGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYFKPIF 99 Query: 397 DELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISIS 450 ++E+ K + Q + +A +L N L+ GC P+L+Q+P F A++ + Sbjct: 100 APIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFAAQYT 159 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 + + F WIKDLA +D + + GIL Sbjct: 160 QGVAGSSFL-WIKDLAKSD-LALTAIVGIL 187 >gi|332359134|gb|EGJ36955.1| SpoIIIJ family protein [Streptococcus sanguinis SK49] Length = 296 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 30/213 (14%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 I +PM + +F G +G+AI++ T+ V+++ PL K + + M +P Sbjct: 29 IGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYFKPIF 88 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 ++E+ K + Q Q+ +I K + ++ G C P+L+Q+P F A++ + Sbjct: 89 APIQERIKNAETQEEKMQAQQELIAAQKENGLSMFGGIGCLPLLIQMPFFSALFFAAQYT 148 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV-GIWPIIMSLSMFIQMKMSP 509 + + F WIKDLA +D + + GIL +Y+ + + GI SM MSP Sbjct: 149 QGVAGSSFL-WIKDLAKSD-WALTAIVGIL-YYIQSVLSLHGIEDETQRNSMKQASYMSP 205 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 M V F F LS PA + +YW Sbjct: 206 ------------IMIVAFSF-LS--PAAVTLYW 223 >gi|328946838|gb|EGG40975.1| SpoIIIJ family protein [Streptococcus sanguinis SK1087] gi|332362242|gb|EGJ40042.1| SpoIIIJ family protein [Streptococcus sanguinis SK1056] Length = 307 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 12/139 (8%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 I +PM + +F G +G+AI++ T+ V+++ PL K + + M +P Sbjct: 40 IGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYFKPIF 99 Query: 397 DELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISIS 450 ++E+ K + Q + +A +L N L+ GC P+L+Q+P F A++ + Sbjct: 100 APIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFAAQYT 159 Query: 451 LEMRHAPFWGWIKDLAAAD 469 + + F WIKDLA +D Sbjct: 160 QGVAGSSFL-WIKDLAKSD 177 >gi|297824719|ref|XP_002880242.1| hypothetical protein ARALYDRAFT_483801 [Arabidopsis lyrata subsp. lyrata] gi|297326081|gb|EFH56501.1| hypothetical protein ARALYDRAFT_483801 [Arabidopsis lyrata subsp. lyrata] Length = 434 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 9/145 (6%) Query: 349 LMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQ 405 L+ ++ G N+ +I LTTV ++ + P+ Q +T + ++P+++ELR++ K Sbjct: 145 LIDGVHSFTGLNWWASIALTTVLIRGVTIPILLNQLKATYKLNVLRPQLEELRQEMSTKA 204 Query: 406 SPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-- 460 P+ + Q+ M L+K H + P +++Q P+F + + I E + G Sbjct: 205 QDPEAMAEGQRRMQLLFKEHGVTPFTPLKGLIIQGPIFISFFFAIRNMAEKVPSFKTGGT 264 Query: 461 -WIKDLAAADPTNIFTLFGILPFYL 484 W DL AD T I L + F + Sbjct: 265 LWFTDLTTADTTYILPLLTAVTFLI 289 >gi|325695044|gb|EGD36947.1| SpoIIIJ family protein [Streptococcus sanguinis SK150] Length = 307 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 12/139 (8%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 I +PM + +F G +G+AI++ T+ V+++ PL K + + M +P Sbjct: 40 IGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYFKPIF 99 Query: 397 DELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISIS 450 ++E+ K + Q + +A +L N L+ GC P+L+Q+P F A++ + Sbjct: 100 APIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFAAQYT 159 Query: 451 LEMRHAPFWGWIKDLAAAD 469 + + F WIKDLA +D Sbjct: 160 QGVAGSSFL-WIKDLAKSD 177 >gi|171920597|ref|ZP_02931850.1| membrane protein OxaA [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|188024459|ref|ZP_02997108.1| membrane protein OxaA [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518432|ref|ZP_03003923.1| membrane protein OxaA [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524211|ref|ZP_03004271.1| membrane protein OxaA [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867408|ref|ZP_03079412.1| membrane protein OxaA [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273351|ref|ZP_03205887.1| membrane protein OxaA [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554229|ref|YP_002285057.1| putative inner membrane protein translocase component YidC [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550935|ref|ZP_03771884.1| membrane protein OxaA [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551006|ref|ZP_03771952.1| membrane protein OxaA [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903307|gb|EDT49596.1| membrane protein OxaA [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|188018755|gb|EDU56795.1| membrane protein OxaA [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998160|gb|EDU67257.1| membrane protein OxaA [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659986|gb|EDX53366.1| membrane protein OxaA [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660884|gb|EDX54137.1| membrane protein OxaA [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249871|gb|EDY74651.1| membrane protein OxaA [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541730|gb|ACI59959.1| membrane protein OxaA [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225378821|gb|EEH01186.1| membrane protein OxaA [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225380089|gb|EEH02451.1| membrane protein OxaA [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 383 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 94/195 (48%), Gaps = 18/195 (9%) Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQ---LYKTHNINPLAGCWPI 433 ++ + + T + IQ KI E+ K+K + Q QK ++ LY+ HN+ PLA + Sbjct: 166 ISARATIQTERISEIQGKIAEINAKYKDAKDMQSRQKKQMETKELYQKHNVKPLAPFESM 225 Query: 434 LLQIPVFFAIYKVISISLEMRH-APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 ++ +P+F IY+V++I ++ + F+ W DL+A + IF+ F + F+ + I Sbjct: 226 IITLPIFLIIYRVVTILRPLKFISIFYIW--DLSATPISEIFSNFTTSGWPYIFFLLIII 283 Query: 493 WPIIMS--LSMFIQMKMSPPPADKGQA---------MILNWMPVVFVFALSSFPAGLIIY 541 I+S + + K + G M N + +V ++ +G+ +Y Sbjct: 284 PVQILSQKIPQLLAKKRNRSATTVGAKNKQQLKRVRMTQNIIAIVLAVVVAISASGIGLY 343 Query: 542 WSWSNVISIVQQAVI 556 W ++ + +I+Q +I Sbjct: 344 WFFNAIFTILQSYII 358 >gi|324991296|gb|EGC23229.1| SpoIIIJ family protein [Streptococcus sanguinis SK353] gi|325687127|gb|EGD29150.1| SpoIIIJ family protein [Streptococcus sanguinis SK72] gi|332367395|gb|EGJ45128.1| SpoIIIJ family protein [Streptococcus sanguinis SK1059] Length = 307 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 13/150 (8%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 I +PM + +F G +G+AI++ T+ V+++ PL K + + M +P Sbjct: 40 IGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYFKPIF 99 Query: 397 DELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISIS 450 ++E+ K + Q + +A +L N L+ GC P+L+Q+P F A++ + Sbjct: 100 APIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFAAQYT 159 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 + + F WIKDLA +D + + GIL Sbjct: 160 QGVAGSSFL-WIKDLAKSD-LALTAIVGIL 187 >gi|293400061|ref|ZP_06644207.1| stage III sporulation protein J [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306461|gb|EFE47704.1| stage III sporulation protein J [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 329 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 19/246 (7%) Query: 330 FEMLIDWGWFY-FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F +D GWF+ I P+ L+++ N + GI I+ T ++LL F + K V+ Sbjct: 81 FSDAMDEGWFHGIIVYPIAQLINWVANFT-DAGIGIIAATFLIQLLIFLFSIKSQVANQR 139 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIY 444 M+ +QP++ +++ K+ + A Q LY + INP +Q PV +Y Sbjct: 140 MQALQPEMQKIQAKYAGRTDDRSKMAQAQEMQALYSKYKINPFGTLLITFIQFPVILGMY 199 Query: 445 KVISISLEMRHAPFWGW------IKDLAAADPT-----NIFTLFGILPFYLPGFMHV-GI 492 + + + F G I+ L + LF +L F +P ++ Sbjct: 200 QATMRAYSVVTGHFAGINLAKTPIEGLKEGQIAFGVIFILMVLFQLLSFKMPQWLQEHRK 259 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + + K P M+ ++ +FA+ ++P G+ YW ++++ + Q Sbjct: 260 KKQHVKEKKYAEPKKQPGMMGSMNMMMYMSTAMIAIFAI-NWPLGMSFYWLVNSIVRVGQ 318 Query: 553 QAVIMK 558 +I K Sbjct: 319 NLLIHK 324 >gi|332358341|gb|EGJ36167.1| SpoIIIJ family protein [Streptococcus sanguinis SK355] Length = 307 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 12/139 (8%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 I +PM + +F G +G+AI++ T+ V+++ PL K + + M +P Sbjct: 40 IGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYFKPIF 99 Query: 397 DELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISIS 450 ++E+ K + Q + +A +L N L+ GC P+L+Q+P F A++ + Sbjct: 100 APIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFAAQYT 159 Query: 451 LEMRHAPFWGWIKDLAAAD 469 + + F WIKDLA +D Sbjct: 160 QGVAGSSFL-WIKDLAKSD 177 >gi|13358167|ref|NP_078441.1| putative inner membrane protein translocase component YidC [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762036|ref|YP_001752687.1| putative inner membrane protein translocase component YidC [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920376|ref|ZP_02690825.2| membrane protein OxaA [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508481|ref|ZP_02958012.1| membrane protein OxaA [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701708|ref|ZP_02971400.1| membrane protein OxaA [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|38503225|sp|Q9PPN7|OXAA_UREPA RecName: Full=Membrane protein oxaA gi|11356766|pir||F82871 conserved hypothetical membrane lipoprotein UU602 [imported] - Ureaplasma urealyticum gi|6899613|gb|AAF31016.1|AE002158_14 conserved hypothetical membrane lipoprotein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827613|gb|ACA32875.1| membrane protein OxaA [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902808|gb|EDT49097.1| membrane protein OxaA [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675901|gb|EDT87806.1| membrane protein OxaA [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700974|gb|EDU19256.1| membrane protein OxaA [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 383 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 40/206 (19%) Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQ---LYKTHNINPLAGCWPI 433 ++ + + T + IQ KI E+ K+K + Q QK ++ LY+ HN+ PLA + Sbjct: 166 ISARATIQTERISEIQGKIAEINAKYKDAKDMQSRQKKQMETKELYQKHNVKPLAPFESM 225 Query: 434 LLQIPVFFAIYKVISISLEMRH-APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 ++ +P+F IY+V++I ++ + F+ W DL+A + IF+ F G Sbjct: 226 IITLPIFLIIYRVVTILRPLKFISIFYIW--DLSATPISEIFS----------NFTTSG- 272 Query: 493 WPIIMSLSMFIQMKM------------------SPPPADKGQ----AMILNWMPVVFVFA 530 WP I L + I +++ + +K Q M N + +V Sbjct: 273 WPYIFFLLIIIPVQILSQKIPQLLARKRNRNATTVGAKNKQQLKRVRMTQNIIAIVLAVV 332 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ +G+ +YW ++ + +I+Q +I Sbjct: 333 VAISASGIGLYWFFNAIFTILQSYII 358 >gi|326793318|ref|YP_004311139.1| membrane protein insertase, YidC/Oxa1 family [Clostridium lentocellum DSM 5427] gi|326544082|gb|ADZ85941.1| membrane protein insertase, YidC/Oxa1 family [Clostridium lentocellum DSM 5427] Length = 394 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 4/95 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ---- 412 V GI+I+L T+ ++L PL ++ M IQP++ +++ K+K Q Q Sbjct: 25 VAALGISIILFTLVARILLTPLQLSSQRTSRGMSKIQPEMQKIQNKYKGKKDQESQLKQS 84 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + M LYK + INP AGC P+L+Q+P+ A++ V+ Sbjct: 85 QEMQALYKKYKINPFAGCLPLLIQLPLIMALFNVL 119 >gi|327470412|gb|EGF15868.1| SpoIIIJ family protein [Streptococcus sanguinis SK330] Length = 307 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 12/139 (8%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 I +PM + +F G +G+AI++ T+ V+++ PL K + + M +P Sbjct: 40 IGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYFKPIF 99 Query: 397 DELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISIS 450 ++E+ K + Q + +A +L N L+ GC P+L+Q+P F A++ + Sbjct: 100 APIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFAAQYT 159 Query: 451 LEMRHAPFWGWIKDLAAAD 469 + + F WIKDLA +D Sbjct: 160 QGVAGSSFL-WIKDLAKSD 177 >gi|302531354|ref|ZP_07283696.1| preprotein translocase YidC subunit [Streptomyces sp. AA4] gi|302440249|gb|EFL12065.1| preprotein translocase YidC subunit [Streptomyces sp. AA4] Length = 375 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 7/89 (7%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAMIQL 418 + I+ T V+ + F Q S M++ P++ ++++K+ +Q Q +QK L Sbjct: 34 LGIIFLTFTVRGIMFKPFVNQVRSMKKMQDFAPEMKKIQKKYANDRQRQAQEMQK----L 89 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + H +NPL C P++LQIPVF + V+ Sbjct: 90 QREHGVNPLGSCLPMILQIPVFIGLNHVL 118 >gi|290890426|ref|ZP_06553501.1| hypothetical protein AWRIB429_0891 [Oenococcus oeni AWRIB429] gi|290479822|gb|EFD88471.1| hypothetical protein AWRIB429_0891 [Oenococcus oeni AWRIB429] Length = 344 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 56/259 (21%), Positives = 114/259 (44%), Gaps = 34/259 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLV----GNFGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 W W I + M M + N V G AI+ T ++++ FP+ +K + + Sbjct: 39 WLW---IGQYMVAFMHWMANDVFKSTNGIGFAIIAITAVIRIVLFPIMFDQQRKATIQSE 95 Query: 388 NMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGC--WPILLQIPVFF 441 M +QP++ +++ K + Q + AM+ +Y+ +N++ + G +L+Q+P+ Sbjct: 96 KMAMLQPQLSKVQAAMKTAQTQEEKVAVNTAMMSVYRENNVSMIGGVNFLSMLIQLPIIS 155 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL-----FGILPFYLPGFMHVGIWPII 496 ++Y I +S + + A ++ F L FGI Y P + + + I Sbjct: 156 SLYTAIRLSTSVLKTD------HINPATYSSSFLLNGSHFFGI-ALYKPS-ITIAVIAGI 207 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIVQQAV 555 L+ M + P A + Q + W + +F + F A L +Y+ ++Q + Sbjct: 208 FYLAQSWFMLKTTPEAQRKQMQTMIWFTPIMMFFFAIFQSAALGLYFVVGGFFVLIQTLI 267 Query: 556 IMKMHGAEIGLIDRLRSTF 574 ++K+H L +++R F Sbjct: 268 LLKIHPK---LQEKIRKEF 283 >gi|297601977|ref|NP_001051873.2| Os03g0844700 [Oryza sativa Japonica Group] gi|255675045|dbj|BAF13787.2| Os03g0844700 [Oryza sativa Japonica Group] Length = 173 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 21/144 (14%) Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFWGWIKDLAAADPTNIFT-- 475 YK +++PLAGC P L+ IPV+ +Y+ +S ++ E + WI LA PT I Sbjct: 1 YKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAG--PTTIAARQ 58 Query: 476 -------LF----GILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPP----PADKGQAMI 519 LF G P + + P+++ +S ++ + M PP P+ +G + Sbjct: 59 SGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQGAQAV 118 Query: 520 LNWMPVVFVFALSSFPAGLIIYWS 543 + ++P++ + S P+GL +YW Sbjct: 119 VKFLPLLIGYFALSVPSGLSLYWC 142 >gi|312370989|gb|EFR19273.1| hypothetical protein AND_22764 [Anopheles darlingi] Length = 415 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 44/211 (20%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAM 415 I + TV V+ L FPL + A M N +Q K+ E R+ + + Sbjct: 132 CIAIGTVVVRTLLFPLVIASQKNAAKMNNHMPQMQVLQVKMTEARQAGNAIDAARYGQEL 191 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAA 468 + K +NPL L Q P+F + + + EM + P W DL Sbjct: 192 MLFMKEKKLNPLKNMLVPLAQAPIFISFFMGLR---EMANTPVDSMREGGLFWFTDLTVC 248 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MILNW 522 D FY PII S+++F+ +++ A A IL Sbjct: 249 DQ-----------FY--------ALPIITSMTLFLTIELGTDSARMSAAGMQTAKYILRA 289 Query: 523 MPVVFVFALS-SFPAGLIIYWSWSNVISIVQ 552 +P+ F+F + +FP ++ YW+ SN S++Q Sbjct: 290 LPI-FIFPFTINFPGAILCYWACSNFFSLLQ 319 >gi|194751063|ref|XP_001957846.1| GF23816 [Drosophila ananassae] gi|190625128|gb|EDV40652.1| GF23816 [Drosophila ananassae] Length = 448 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 30/208 (14%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAM 415 AI + T+ V+ + FPL ++A M N +Q K+ E R+ + M Sbjct: 162 AIAVGTLVVRTIIFPLVILAQRNSAKMNNNMPQMQLLQLKMTEARQSGNAIESARYAQEM 221 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAA 468 + + +NPL L Q P+F + + + +M + P W DL A Sbjct: 222 MLFMREKGVNPLKNMVVPLAQAPLFISFFMGLR---QMANTPVDSMRDGGLFWFTDLTLA 278 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + L YL + +G +S + MK +L +P+V Sbjct: 279 DPLYLLPLITSATLYL--TIEIGTDSARLSAANMNTMKY-----------VLRALPIVIF 325 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 +FPA ++ YW+ SN IS+ Q A++ Sbjct: 326 PFTMNFPAAILTYWACSNFISLGQVALL 353 >gi|282917439|ref|ZP_06325192.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus D139] gi|282318641|gb|EFB48998.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus D139] Length = 207 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 27/174 (15%) Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVF 440 MK +P++++++EK K++ Q + A ++Q+YK +++NP+ GC P+L+Q+P+ Sbjct: 5 KMKVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPII 64 Query: 441 FAIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 +Y V+ L + P + W DL D I + G+L F Sbjct: 65 MGLYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF---------------- 106 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ K P + M++ P++ ++ S + L +YWS S +VQ Sbjct: 107 IQAYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQ 160 >gi|312437493|gb|ADQ76564.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH60] Length = 202 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 27/173 (15%) Query: 389 MKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++++++EK K++ Q + A ++Q+YK +++NP+ GC P+L+Q+P+ Sbjct: 1 MKVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIM 60 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W DL D I + G+L F + Sbjct: 61 GLYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF----------------I 102 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ K P + M++ P++ ++ S + L +YWS S +VQ Sbjct: 103 QAYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQ 155 >gi|307198512|gb|EFN79417.1| Mitochondrial inner membrane protein OXA1L [Harpegnathos saltator] Length = 275 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 42/213 (19%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQKAM 415 I++ TV ++ L FPL + A N P I E+++K ++ + Sbjct: 12 TIVIGTVILRTLIFPLVVITQKNMAKFTNHMPVIQEIQQKMTKARHIGDHFESARYASEL 71 Query: 416 IQLYKTHNINPLAGCWPILLQIPVF----FAIYKVISISLE-MRHAPFWGWIKDLAAADP 470 ++ K HN+ L+Q P+F A+ K+ ++ +E ++ FW W++DL DP Sbjct: 72 MEYMKKHNVKIGRNFLIPLVQAPIFISCFLALRKMANLPVESLKQGGFW-WMQDLTIHDP 130 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 +Y I PI+ ++M+I +++ AD L M VF Sbjct: 131 -----------YY--------IMPIVTCVTMYITIEIG---ADGTHLKSLGVMRYVFRIV 168 Query: 531 -------LSSFPAGLIIYWSWSNVISIVQQAVI 556 + +FP ++ YW+ +N +S++Q +++ Sbjct: 169 PFAILPFILNFPGAILTYWASTNFMSLIQTSLL 201 >gi|291539803|emb|CBL12914.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Roseburia intestinalis XB6B4] Length = 430 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/114 (24%), Positives = 63/114 (55%), Gaps = 9/114 (7%) Query: 342 IAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 IAK + +M+ Y L + N G++I++ T+ + + FPL KQ + + +QP++ Sbjct: 14 IAKVLGWVMNGIYALMSMIGIENVGLSIIIFTIVIYAILFPLTYKQQKFSKLSQKMQPEL 73 Query: 397 DELREKF----KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 +++K+ Q+ +Q+ +Y+ + ++ + C +L+Q+P+ A+Y+V Sbjct: 74 QAIQKKYNGKKDQASMMAMQEETQAVYEKYGVSMMGSCVQMLIQMPLLCALYRV 127 >gi|260834921|ref|XP_002612458.1| hypothetical protein BRAFLDRAFT_214259 [Branchiostoma floridae] gi|229297835|gb|EEN68467.1| hypothetical protein BRAFLDRAFT_214259 [Branchiostoma floridae] Length = 383 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 32/209 (15%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ------VLQKAMI 416 +I+ T+ + L FPL K + N+ N+ P+I ++ EK ++ Q A + Sbjct: 92 SIVCCTLLARSLMFPLIVKGQKNAINLNNVMPQIQKMNEKINEARTMGNKFEVAHQTAEL 151 Query: 417 QLY-KTHNINPLAGCWPILLQIPVFFAIY----KVISISLEMRHAPFWGWIKDLAAADPT 471 Q + K H +NPL L+Q+PVF + + ++ ++ + W DL A+DP Sbjct: 152 QAFMKKHGVNPLKNFLVPLVQMPVFISFFVGLRRMATLPIMSMATGGIFWFTDLTASDPY 211 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMF----IQMKMSPPPADKGQAMILNWMPVVF 527 F LP + + II S QMKM + + + L +P+ Sbjct: 212 ----------FILPVMTSITMLTIIELGSELGVENPQMKMM---KNVMRVVSLMILPLTA 258 Query: 528 VFALSSFPA----GLIIYWSWSNVISIVQ 552 F SFP + YW SN +I Q Sbjct: 259 SFPTHSFPKVYCIAIFTYWMTSNTFTIAQ 287 >gi|224477076|ref|YP_002634682.1| hypothetical protein Sca_1592 [Staphylococcus carnosus subsp. carnosus TM300] gi|229462937|sp|Q9RGS4|OXAA_STACT RecName: Full=Membrane protein oxaA; Flags: Precursor gi|222421683|emb|CAL28497.1| conserved hypothetical protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 289 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/100 (23%), Positives = 58/100 (58%), Gaps = 11/100 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----IQPKIDELREKFKQSPPQ----V 410 ++G+AI++ + ++++ P Y ++ M+ +P +D ++EK +++ Q Sbjct: 54 DYGLAIIVLVLAIRIIVLPFMLSNYKNSHMMREKMIIAKPDMDAVKEKVQRARTQEDKMA 113 Query: 411 LQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKVI 447 + M+++YK +++NP+ GC P+L+Q+P+ ++ V+ Sbjct: 114 ANQEMMEVYKKYDMNPMQSMLGCLPMLIQMPIIMGLFFVL 153 >gi|269114775|ref|YP_003302538.1| hypothetical protein MHO_0010 [Mycoplasma hominis] gi|268322400|emb|CAX37135.1| Hypothetical protein MHO_0010 [Mycoplasma hominis ATCC 23114] gi|291163429|gb|ADD80741.1| putative inner membrane protein translocase component YidC [Mycoplasma hominis ATCC 23114] Length = 664 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 20/196 (10%) Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFK--QSPPQVLQKAMIQ---LYKTHNINPLAGC 430 F ++ K S A M+ K ++ K+ + Q++Q+ + LYK I+P + Sbjct: 452 FGVSFKSLFSQAKMEEFNQKKAKIESKYAAYKGDRQMMQRKQAEISELYKKEKISPWSQI 511 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT--LFGILPFYLPGFM 488 WP + +P+ +++VI+ S E++ A ++ L+A +F+ F LP L + Sbjct: 512 WPQFIALPILIVVFRVINTSPEIKQATWYSI--QLSANSLNRVFSNKEFIYLPIIL---I 566 Query: 489 HVGIWPIIMSLSMFIQMKMSP--------PPADKGQAMILNWMPVVFVFALSSFPAGLII 540 VG+ + + + K A K Q + N + +VF+ + F AGL I Sbjct: 567 SVGMQALSQYMPKILNWKKKKSLRVDAYQKAAMKKQNRMSNIISLVFIIFGAFFSAGLQI 626 Query: 541 YWSWSNVISIVQQAVI 556 YW I I+Q + Sbjct: 627 YWIVGAFILILQHIFV 642 >gi|331698376|ref|YP_004334615.1| membrane protein [Pseudonocardia dioxanivorans CB1190] gi|326953065|gb|AEA26762.1| membrane protein insertase, YidC/Oxa1 family [Pseudonocardia dioxanivorans CB1190] Length = 391 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 61/114 (53%), Gaps = 6/114 (5%) Query: 339 FYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN----MKNIQ 393 +Y ++ M+ F ++G + G A L+ VF+ L + K ++S M+ + Sbjct: 6 YYPVSAVMWFWHQAFALVLGPSSGFAWALSVVFLVLTLRAIMIKPFLSQVRSGRRMRALA 65 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 P++ E+R++ ++L + +L K H ++ L GC P+L+Q+PVF A+ V+ Sbjct: 66 PQLAEIRKRHANDKQKMLAETQ-KLQKEHGVSTLGGCLPLLIQMPVFLALLHVL 118 >gi|170783400|ref|YP_001711734.1| putative inner membrane protein translocase component YidC [Clavibacter michiganensis subsp. sepedonicus] gi|169157970|emb|CAQ03180.1| membrane insertion protein [Clavibacter michiganensis subsp. sepedonicus] Length = 320 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 109/222 (49%), Gaps = 30/222 (13%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQ 417 ++I+ + V+ P+ +Q + M + P++ ++++K+K Q ++AM + Sbjct: 41 LSIVGLVLVVRAALIPIFVRQIKNQRRMMEVVPQLKKIQDKYKGKRDQFSREAMSRETMA 100 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD-----------LA 466 LYK NPL+ C P+LLQ+P+FF++Y V+ + + P G + + L Sbjct: 101 LYKDTGTNPLSSCLPLLLQMPIFFSLYSVLHRA-AVEELPGIGLLNEQLSRSFGESSFLG 159 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-QMKM---------SPPPADKGQ 516 A + I T G + + V I+MS S FI Q+++ P K Q Sbjct: 160 APLQSAISTANGNITVIVIATTMV----ILMSASQFITQLQIMAKNMSEETKASPMFKQQ 215 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++L +P+VF + +FP G++ YW SN ++ QQ ++++ Sbjct: 216 RILLYILPLVFAVSGIAFPLGVMFYWLVSNFWTMGQQFLVIR 257 >gi|311896204|dbj|BAJ28612.1| hypothetical protein KSE_28010 [Kitasatospora setae KM-6054] Length = 258 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+L T+ V+ PLA+ S + P++ LRE+ + P + L + ++ L++ Sbjct: 29 VAIVLFTLAVRAALHPLARSAARSARARARLVPEVARLRERHGKDPGR-LNREVLALHRA 87 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVIS 448 + P AG P LLQ P F +Y++ + Sbjct: 88 AGVGPFAGLLPALLQAPFFSVMYRLFT 114 >gi|296118600|ref|ZP_06837178.1| membrane protein OxaA [Corynebacterium ammoniagenes DSM 20306] gi|295968499|gb|EFG81746.1| membrane protein OxaA [Corynebacterium ammoniagenes DSM 20306] Length = 305 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+L T +K + S M+ +QP + E+R K+ + ++ M ++YK Sbjct: 12 LAIVLLTWTLKAIMVKPTLSSLRSQRKMQELQPLLQEVRTKYANDKTKQAEE-MQKVYKD 70 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 + P+AGC P++ QIP+F ++ V+ Sbjct: 71 AKVRPMAGCLPMVAQIPMFIGLFHVL 96 >gi|300791163|ref|YP_003771454.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei U32] gi|299800677|gb|ADJ51052.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei U32] Length = 384 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 + I+ T V+ + F Q S M++ P++ ++++K+ Q M +L K Sbjct: 34 LGIIFLTFTVRGIMFKPFVNQVRSMKKMQDFAPEMKKIQKKYANDR-QRQAAEMQKLQKE 92 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 H +NPL C P+LLQIPVF + V+ Sbjct: 93 HGVNPLGSCLPMLLQIPVFIGLNHVL 118 >gi|319893042|ref|YP_004149917.1| short form OxaI-like inner membrane protein translocase component YidC [Staphylococcus pseudintermedius HKU10-03] gi|317162738|gb|ADV06281.1| short form OxaI-like inner membrane protein translocase component YidC [Staphylococcus pseudintermedius HKU10-03] Length = 288 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 7/75 (9%) Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWP 432 K ++ MK +P+I E +EK K++ Q + M+Q+YK +N+NP+A GC P Sbjct: 79 KNMHMMREKMKIAKPEITEAQEKVKRARTQEDKMAANQEMMQVYKKYNMNPMASMLGCLP 138 Query: 433 ILLQIPVFFAIYKVI 447 ++LQ+P+ ++ V+ Sbjct: 139 LILQMPIIMGLFFVL 153 >gi|325185413|emb|CCA19898.1| mitochondrial inner membrane protein OXA1 putative [Albugo laibachii Nc14] Length = 362 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 28/204 (13%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---QSPPQVL--QKAMIQL 418 I ++TV V+ + + K + A +K IQPK+++L+E+ + ++P +V+ Q+ L Sbjct: 112 IAVSTVIVRSVMIYPSIKGIRNAAKLKIIQPKLEKLKEEMEVGPRTPEKVIDFQRKYKAL 171 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIY---KVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++++ G + L QIP+F + + + E W DL AADPT Sbjct: 172 MSANDVSIFRGLYVPLFQIPMFLGFFWGLRELPKYYESCKEGGALWFTDLGAADPTY--- 228 Query: 476 LFGILPFYLPGFMHVGIWPII---MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 ILP M V + ++ M +MK+ + M V+ + Sbjct: 229 ---ILPVLNAALMLVAVETGSEGGLNNDMRDKMKIG-----------MRCMSVLMIPFTM 274 Query: 533 SFPAGLIIYWSWSNVISIVQQAVI 556 F GL ++W SN S+ Q A++ Sbjct: 275 HFETGLFVFWIASNTCSLAQSAML 298 >gi|304414030|ref|ZP_07395398.1| putative inner membrane protein [Candidatus Regiella insecticola LSR1] gi|304283244|gb|EFL91640.1| putative inner membrane protein [Candidatus Regiella insecticola LSR1] Length = 380 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 23/208 (11%) Query: 359 NFGIAIMLTTVFVKLLFFP----LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +GI I+L ++ KL P L + Q + + P+++ ++ F + + QK Sbjct: 178 GWGITIILLSLLFKLFILPANILLTRAQRKVSHLQARLAPELEYIKANF--TGEEAHQKF 235 Query: 415 MIQLYKTHNINPLAGCWPILLQI---PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 M ++K ++P +LL + P AI+ V+S + PF WI+DLA P Sbjct: 236 M-AVHKQQGVSPFYNLRSLLLTLAPFPFLIAIFNVLSEMDLIAGHPFL-WIEDLAY--PD 291 Query: 472 NIFTLFGILPFYLPGF-MHVGIWPIIMSL-----SMFIQMKMSPPPADKGQAMILNWMPV 525 I+ L F++P + + PI+M+L ++ Q K+ + Q + L +M Sbjct: 292 AIYHL----GFHIPLLGASINLLPILMTLLTILAAVIHQNKIISTKELRKQKLNLYFMAE 347 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQ 553 F FP+ +++YW ++N+ ++QQ Sbjct: 348 GFFLLFYPFPSTMVLYWIFANIWQLIQQ 375 >gi|323463903|gb|ADX76056.1| membrane protein OxaA [Staphylococcus pseudintermedius ED99] Length = 288 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 7/75 (9%) Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWP 432 K ++ MK +P+I E +EK K++ Q + M+Q+YK +N+NP+A GC P Sbjct: 79 KNMHMMREKMKIAKPEITEAQEKVKRARTQEDKMAANQEMMQVYKKYNMNPMASMLGCLP 138 Query: 433 ILLQIPVFFAIYKVI 447 ++LQ+P+ ++ V+ Sbjct: 139 LILQMPIIMGLFFVL 153 >gi|323351007|ref|ZP_08086664.1| SpoIIIJ family protein [Streptococcus sanguinis VMC66] gi|322122731|gb|EFX94440.1| SpoIIIJ family protein [Streptococcus sanguinis VMC66] Length = 307 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 12/139 (8%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 I +PM + +F G +G+AI++ T+ V+++ PL K + + M +P Sbjct: 40 IGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYFKPIF 99 Query: 397 DELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISIS 450 ++++ K + Q + +A +L N L+ GC P+L+Q+P F A++ + Sbjct: 100 APIQDRIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFAAQYT 159 Query: 451 LEMRHAPFWGWIKDLAAAD 469 + + F WIKDLA +D Sbjct: 160 QGVAGSSFL-WIKDLAKSD 177 >gi|256384304|gb|ACU78874.1| membrane protein OxaA [Mycoplasma mycoides subsp. capri str. GM12] gi|256385137|gb|ACU79706.1| membrane protein OxaA [Mycoplasma mycoides subsp. capri str. GM12] gi|296455637|gb|ADH21872.1| membrane protein OxaA [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 396 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 72/320 (22%), Positives = 134/320 (41%), Gaps = 62/320 (19%) Query: 285 YQAKFSANEITILPGKSITTTNFLF-----AGAKEFPTIHHYEKDL---------AIPRF 330 YQA++S N+I + GKS+ F + ++ +HH+ D AI + Sbjct: 55 YQAQYSVNQIVDMTGKSVYAPGVSFEIILSSLGEKGSKVHHFVYDKGNYFEYGYNAITSW 114 Query: 331 EMLID------WGWFYF----IAKPMFMLMSYFYNLVGN------FGI----AIMLTTVF 370 + +G+F + + M L S N + + +GI AI LTT+ Sbjct: 115 KETFKLTQSPFYGFFVYPTAWVLAGMVRLFSGTLNPLLDKSSQLSYGISAIFAIFLTTLL 174 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQ---LYKTHNINP 426 +K + K ++ M++IQ KI +++ K+K Q QK ++ LYK N++ Sbjct: 175 IKGITLSFGWKSQINQEKMQDIQLKIADIQAKYKDKKDMQSKQKQQLEIQALYKKENMSQ 234 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT------LFGIL 480 + +P FAIY ++ + ++ +AA P + G Sbjct: 235 FSALAGSFAPLPFLFAIYAIVRSTRALK----------IAAVGPIALIEGPWQQITSGNY 284 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKM--------SPPPADKGQAMILNWMPVVFVFALS 532 + + +++ + + M L +QMK + + K Q ++ M VF+ + Sbjct: 285 IYIIILAIYLPLQAVSMLLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVMMFVFIIIIV 344 Query: 533 SFPAGLIIYWSWSNVISIVQ 552 S G+ IYW +S+V+ I+Q Sbjct: 345 SVATGVCIYWIFSSVLQIIQ 364 >gi|207093711|ref|ZP_03241498.1| putative inner membrane protein translocase component YidC [Helicobacter pylori HPKX_438_AG0C1] Length = 41 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 20/29 (68%), Positives = 24/29 (82%) Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVI 447 YK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 11 YKKHGANPLGGCLPLILQIPVFFAIYRVL 39 >gi|42561574|ref|NP_976025.1| putative inner membrane protein translocase component YidC [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42493073|emb|CAE77667.1| Conserved hypothetical transmembrane protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320601|gb|ADK69244.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 396 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 72/320 (22%), Positives = 134/320 (41%), Gaps = 62/320 (19%) Query: 285 YQAKFSANEITILPGKSITTTNFLF-----AGAKEFPTIHHYEKDL---------AIPRF 330 YQA++S N+I + GKS+ F + ++ +HH+ D AI + Sbjct: 55 YQAQYSVNQIVDMTGKSVYAPGVSFEIILSSLGEKGSKVHHFVYDKGNYFEYGYNAITSW 114 Query: 331 EMLID------WGWFYF----IAKPMFMLMSYFYNLVGN------FGI----AIMLTTVF 370 + +G+F + + M L S N + + +GI AI LTT+ Sbjct: 115 KETFKLTQSPFYGFFVYPTAWVLAGMVRLFSGTLNPLLDKSSQLSYGISAIFAIFLTTLL 174 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQ---LYKTHNINP 426 +K + K ++ M++IQ KI +++ K+K Q QK ++ LYK N++ Sbjct: 175 IKGITLSFGWKSQINQEKMQDIQLKIADIQAKYKDKKDMQSKQKQQLEIQALYKKENMSQ 234 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT------LFGIL 480 + +P FAIY ++ + ++ +AA P + G Sbjct: 235 FSALAGSFAPLPFLFAIYAIVRSTRALK----------IAAVGPIALIEGPWQQITSGNY 284 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKM--------SPPPADKGQAMILNWMPVVFVFALS 532 + + +++ + + M L +QMK + + K Q ++ M VF+ + Sbjct: 285 IYIIILAIYLPLQAVSMLLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVMMFVFIIIIV 344 Query: 533 SFPAGLIIYWSWSNVISIVQ 552 S G+ IYW +S+V+ I+Q Sbjct: 345 SVATGVCIYWIFSSVLQIIQ 364 >gi|323342260|ref|ZP_08082492.1| hypothetical protein HMPREF0357_10673 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463372|gb|EFY08566.1| hypothetical protein HMPREF0357_10673 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 280 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 36/250 (14%) Query: 336 WG---WF-YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WG WF P+ +++F VG G +I++ T+ +K++ + K V M+ Sbjct: 45 WGSDTWFGALFVWPIAQALNFFSQYVGTIG-SIVVVTLIIKIITIKGSIKATVQQQKMQL 103 Query: 392 IQPKIDELREKFKQSPPQV--LQKA--MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 I P+ + K++ Q LQKA M +L++ H INP+ LQ+P+ A+Y+ + Sbjct: 104 IGPEQARIEAKYQGRNDQQAKLQKATEMQKLFEKHEINPMGALGGTFLQLPIMIAMYQAV 163 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S + + +G +L P FT G + + I+M+LS F+ M + Sbjct: 164 MRSEAIINGTVFGQTLELT---PMQGFT---------QGNIIIIGIFILMALSQFLSMFL 211 Query: 508 --------------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 PA++ M+ + + ++ V AL ++ G+ +YW S + +VQ Sbjct: 212 PQYLAKQKIRKRSYEKQPANQANMMMYSSLIMIVVLAL-NWQVGMSLYWMVSALAQLVQT 270 Query: 554 AVIMKMHGAE 563 I +GA+ Sbjct: 271 LFINHKYGAK 280 >gi|331703940|ref|YP_004400627.1| membrane protein OxaA [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802495|emb|CBW54650.1| Membrane protein OxaA [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 388 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 72/320 (22%), Positives = 135/320 (42%), Gaps = 62/320 (19%) Query: 285 YQAKFSANEITILPGKSITTTNFLF-----AGAKEFPTIHHYEKDL---------AIPRF 330 YQA++S N+I + GKS+ F + ++ +HH+ D AI + Sbjct: 47 YQAQYSVNQIVDMTGKSVYAPGVSFEIILSSLGEKGSKVHHFVYDKGNYFEYGYNAITSW 106 Query: 331 EMLID------WGWFYF----IAKPMFMLMSYFYNLVGN------FGI----AIMLTTVF 370 + +G+F + + M L S N + + +GI AI LTT+ Sbjct: 107 KETFKLTQSPFYGFFVYPTAWVLAGMVRLFSGTLNPLLDKSSQLSYGISAIFAIFLTTLL 166 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQVLQKAMIQ---LYKTHNINP 426 +K + K ++ M++IQ KI +++ K+K + Q QK ++ LYK N++ Sbjct: 167 IKGITLSFGWKSQINQEKMQDIQLKIADIQAKYKDKKDMQSKQKQQLEIQALYKKENMSQ 226 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT------LFGIL 480 + +P FAIY ++ + ++ +AA P + G Sbjct: 227 FSALAGSFAPLPFLFAIYAIVRSTRALK----------IAAVGPIALIEGPWQQITSGNY 276 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKM--------SPPPADKGQAMILNWMPVVFVFALS 532 + + +++ + + M L +QMK + + K Q ++ M VF+ + Sbjct: 277 IYIIILAIYLPLQAVSMLLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVMMFVFIIIIV 336 Query: 533 SFPAGLIIYWSWSNVISIVQ 552 S G+ IYW +S+V+ I+Q Sbjct: 337 SVATGVCIYWIFSSVLQIIQ 356 >gi|255537783|ref|XP_002509958.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis] gi|223549857|gb|EEF51345.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis] Length = 421 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 22/212 (10%) Query: 354 YNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS---PPQ 409 +NL G N+ +I+LTT+ ++ + PL Q +T+ + ++P+++E++++ + P Sbjct: 150 HNLTGFNWWASIVLTTLIIRTMMVPLMINQLKATSKLTLMRPRLEEIKQQMDNTAMDPAA 209 Query: 410 VLQ--KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---WIKD 464 + + K M L+K + +P I +Q PVF + I E + G W D Sbjct: 210 IAEGNKRMKMLFKEYGASPFTPMKGIFVQGPVFVCFFLAIRNMAEKVPSFKNGGAFWFVD 269 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ D IF + L F++ ++ + +Q + P I Sbjct: 270 LSTPDSLYIFPVLTALTFWI-------------TVELNMQEGLEGNPVAGTMKNISRVFA 316 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + V FP + YW +N+ S V+ Sbjct: 317 ALTVPLTMGFPKAIFCYWVTTNLFSFAYGGVL 348 >gi|319653028|ref|ZP_08007133.1| hypothetical protein HMPREF1013_03748 [Bacillus sp. 2_A_57_CT2] gi|317395377|gb|EFV76110.1| hypothetical protein HMPREF1013_03748 [Bacillus sp. 2_A_57_CT2] Length = 177 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 7/79 (8%) Query: 388 NMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFF 441 M ++P+++++++K K + Q LQ+ M LY++H +NPL AGC PI +Q+P+ Sbjct: 4 KMDKLKPELEKIQQKLKTAKKPQEQQKLQQEMFGLYQSHGVNPLNAAGCLPIFIQMPILM 63 Query: 442 AIYKVISISLEM-RHAPFW 459 + I + E+ H+ W Sbjct: 64 GFFYAIRGNQEIAAHSFLW 82 >gi|238883319|gb|EEQ46957.1| conserved hypothetical protein [Candida albicans WO-1] Length = 374 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/199 (22%), Positives = 94/199 (47%), Gaps = 23/199 (11%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---LYK 420 I++ T+ V+L+ FPL + + M I+P+IDEL ++ K +AM + + K Sbjct: 116 IVVATIAVRLVLFPLYVRASSNATKMSKIKPQIDELLQQIKTGDTVDQMRAMEKRRLIMK 175 Query: 421 THNINPLAGCWPILLQIPV----FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 + ++ LA +P +Q+P+ F A+ K+ + ++E + W ++L DP L Sbjct: 176 ENGVSTLATLFPA-VQLPLAYGFFQALRKMANHNVEGFSDQGYAWFQNLIEVDP--YLGL 232 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 I + + VG Q M+ G ++ +P+ +F F + Sbjct: 233 QAISAAAIIAVVRVG--------GETGQHAMAA-----GMKKVMTVVPIASIFITKGFAS 279 Query: 537 GLIIYWSWSNVISIVQQAV 555 +I+Y++ +++ S++Q ++ Sbjct: 280 AIILYFAVNSIFSLIQSSL 298 >gi|148274159|ref|YP_001223720.1| putative inner membrane protein translocase component YidC [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147832089|emb|CAN03062.1| unnamed protein product [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 320 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 28/221 (12%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQ 417 ++I+ + V+ P+ +Q + M + P++ ++++K+K Q ++AM + Sbjct: 41 LSIVGLVLVVRAALIPIFVRQIKNQRRMMEVAPQLKKIQDKYKGKRDQFSREAMSRETMA 100 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS----------LEMRHAPFWGWIKDLAA 467 LYK NPL+ C P+LLQ+P+FF++Y V+ + L + + +G L A Sbjct: 101 LYKDTGTNPLSSCLPLLLQMPIFFSLYSVLHRAAVEELPGIGLLNAQLSRSFGESSFLGA 160 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-QMKM---------SPPPADKGQA 517 + I T G + + V I+MS S FI Q+++ P K Q Sbjct: 161 PLQSAISTANGNVTVIVIATTMV----ILMSASQFITQLQIMAKNMSEETKASPMFKQQR 216 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++L +P+VF + +FP G++ YW SN ++ QQ ++++ Sbjct: 217 ILLYILPLVFAVSGIAFPLGVMFYWLVSNFWTMGQQFLVIR 257 >gi|256375226|ref|YP_003098886.1| 60 kDa inner membrane insertion protein [Actinosynnema mirum DSM 43827] gi|255919529|gb|ACU35040.1| 60 kDa inner membrane insertion protein [Actinosynnema mirum DSM 43827] Length = 266 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 T V+LL PL + + P++ EL EK ++ P + LQ+ + LYK + Sbjct: 23 TALVRLLLHPLTRAAVRGEKAKAALAPQLRELTEKHREDPVK-LQEKTLALYKDAGTSLF 81 Query: 428 AGCWPILLQIPVFFAIYKVIS 448 AG P+L Q P F +Y++++ Sbjct: 82 AGILPMLAQAPFFMVVYQLVT 102 >gi|6707005|gb|AAF25545.1|AF109218_5 lipoprotein precursor [Staphylococcus carnosus] Length = 225 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/100 (23%), Positives = 58/100 (58%), Gaps = 11/100 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----IQPKIDELREKFKQSPPQ----V 410 ++G+AI++ + ++++ P Y ++ M+ +P +D ++EK +++ Q Sbjct: 54 DYGLAIIVLVLAIRIIVLPFMLSNYKNSHMMREKMIIAKPDMDAVKEKVQRARTQEDKMA 113 Query: 411 LQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKVI 447 + M+++YK +++NP+ GC P+L+Q+P+ ++ V+ Sbjct: 114 ANQEMMEVYKKYDMNPMQSMLGCLPMLIQMPIIMGLFFVL 153 >gi|68469228|ref|XP_721401.1| hypothetical protein CaO19.6565 [Candida albicans SC5314] gi|68470253|ref|XP_720888.1| hypothetical protein CaO19.13918 [Candida albicans SC5314] gi|77022678|ref|XP_888783.1| hypothetical protein CaO19_6565 [Candida albicans SC5314] gi|46442780|gb|EAL02067.1| hypothetical protein CaO19.13918 [Candida albicans SC5314] gi|46443318|gb|EAL02601.1| hypothetical protein CaO19.6565 [Candida albicans SC5314] gi|76573596|dbj|BAE44680.1| hypothetical protein [Candida albicans] Length = 374 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/199 (22%), Positives = 94/199 (47%), Gaps = 23/199 (11%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---LYK 420 I++ T+ V+L+ FPL + + M I+P+IDEL ++ K +AM + + K Sbjct: 116 IVVATIAVRLVLFPLYVRASSNATKMSKIKPQIDELLQQIKTGDTVDQMRAMEKRRLIMK 175 Query: 421 THNINPLAGCWPILLQIPV----FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 + ++ LA +P +Q+P+ F A+ K+ + ++E + W ++L DP L Sbjct: 176 ENGVSTLATLFPA-VQLPLAYGFFQALRKMANHNVEGFSDQGYAWFQNLIEVDP--YLGL 232 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 I + + VG Q M+ G ++ +P+ +F F + Sbjct: 233 QAISAAAIIAVVRVG--------GETGQHAMAA-----GMKKVMTVVPIASIFITKGFAS 279 Query: 537 GLIIYWSWSNVISIVQQAV 555 +I+Y++ +++ S++Q ++ Sbjct: 280 AIILYFAVNSIFSLIQSSL 298 >gi|110740108|dbj|BAF01955.1| chloroplast membrane protein [Arabidopsis thaliana] Length = 201 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 5/77 (6%) Query: 492 IWPIIMSLSMFIQMK-MSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 + P+++ S ++ M+ M PP PA K ++ ++P++ + S P+GL IYW +N Sbjct: 22 VLPVLLIASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWLTNN 81 Query: 547 VISIVQQAVIMKMHGAE 563 V+S QQ + K+ GA+ Sbjct: 82 VLSTAQQVYLRKLGGAK 98 >gi|296119231|ref|ZP_06837800.1| putative membrane protein OxaA [Corynebacterium ammoniagenes DSM 20306] gi|295967752|gb|EFG81008.1| putative membrane protein OxaA [Corynebacterium ammoniagenes DSM 20306] Length = 353 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 26/152 (17%) Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +L F+ + ++I+L + V+ L PL ++S N +I L K + Sbjct: 6 LLTHNFFEEQTAWLVSIVLLVLTVRSLIAPLT---WMSVKN-----GRISALLRPTKAAM 57 Query: 408 PQVL--------QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 P V ++A+ L+K HN NP GC P+L+ +PVF +Y+V+ L M F Sbjct: 58 PAVTTPEEFEANKEAVDALHKEHNFNPAVGCLPLLIMLPVFLGLYQVV---LRMARPSFE 114 Query: 460 GWIKDLAAADPTNIF---TLFGILPFYLPGFM 488 G I AD F TL GI +P FM Sbjct: 115 GSI-GFITADEVESFRQTTLNGI---RIPAFM 142 >gi|293380720|ref|ZP_06626768.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus crispatus 214-1] gi|290922684|gb|EFD99638.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus crispatus 214-1] Length = 321 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/236 (22%), Positives = 107/236 (45%), Gaps = 34/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +GW Y ++ +P+ +M ++G G I++ TV V+++ PL K Sbjct: 39 YGWVYQWLGRPLQNIMIQTAQMIGGDNGAGWGIVIITVVVRVILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ---SPPQVLQKAMIQ--LYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ + +P Q + + Q LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ + F+G + I T+F ++ Y+ +GI Sbjct: 159 WGIYQAVFYSPQLAQSKFFGISLSSKSVVLAIIATVFTVIQGYIS---LIGI-------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K ++ P++ +F SF L +YW+ SN++ IVQQ ++ Sbjct: 208 --------PEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAASNLVMIVQQVIV 255 >gi|328706364|ref|XP_001946799.2| PREDICTED: mitochondrial inner membrane protein OXA1L-like [Acyrthosiphon pisum] Length = 423 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 47/214 (21%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQL 418 AI+ T ++LL FPL TA M N P+I +EK ++ P + +A +L Sbjct: 148 AIIAGTTILRLLVFPLVVTSQRHTARMNNNMPQIQAYQEKMTEARLHGNPYEMARASQEL 207 Query: 419 Y---KTHNINPLAGCWPILLQIPVFFAIY----KVISISLE-MRHAPFWGWIKDLAAADP 470 KT+ +NPL G +Q P+F +++ + + LE ++ W W D+ D Sbjct: 208 MLFMKTNQVNPLKGMILPAIQFPIFLSMFLGLRGMAMLPLESFKYGGLW-WFTDITLPD- 265 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI----------- 519 I PI+ +++ + +++ AD G+ Sbjct: 266 ------------------QYFILPIVTVVTLGVTLELG---ADIGKLASSGVGFGKYLKY 304 Query: 520 -LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + +P+V + +FP + +YW+ +N IS+ Q Sbjct: 305 GVRVLPLVVFPFIVNFPCAVCLYWASTNFISLGQ 338 >gi|195589346|ref|XP_002084413.1| GD12846 [Drosophila simulans] gi|194196422|gb|EDX09998.1| GD12846 [Drosophila simulans] Length = 414 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 30/200 (15%) Query: 371 VKLLFFPLAKKQYVSTANMKN-------IQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 V+ + FPL ++A M N +Q K+ E R+ + M+ + Sbjct: 136 VRTIIFPLVILAQRNSAKMNNNMPQMQMLQLKMTEARQSGNAIESARYAQEMMLFMREKG 195 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAADPTNIFTL 476 +NPL L Q P+F + + + +M +AP W DL ADP + L Sbjct: 196 VNPLKNMVVPLAQAPLFISFFMGLR---QMANAPVESMRDGGLFWFTDLTMADPYYLLPL 252 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 YL + +G +S + MK +L +P+V +FPA Sbjct: 253 ITSATLYL--TIEIGTDSARLSAANMNTMKY-----------VLRALPIVIFPFTMNFPA 299 Query: 537 GLIIYWSWSNVISIVQQAVI 556 ++ YW+ SN IS+ Q AV+ Sbjct: 300 AILTYWACSNFISLGQVAVL 319 >gi|296875963|ref|ZP_06900022.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus parasanguinis ATCC 15912] gi|296433038|gb|EFH18826.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus parasanguinis ATCC 15912] Length = 305 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 31/228 (13%) Query: 341 FIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPK 395 + +PM + +F NL FGI I++ T+ V+L+ PL K + M ++P Sbjct: 40 LLGRPMGEAIKFFANNLGLGFGIGIIIVTLIVRLIILPLGLYQSWKATYQSEKMNYLKPI 99 Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVISI 449 + ++E+ K + Q + Q+ ++ + + ++ GC P+L+Q+P F A++ Sbjct: 100 LGPIQERMKNASTQEEKLLAQQELMAAQRENGVSMFGGVGCLPLLIQMPFFSALFFAAQH 159 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV-GIWPIIMSLSMFIQMKMS 508 + + + F G +A P+ + T + +Y+ + + GI SM MS Sbjct: 160 TKGVAESSFLG----IALGKPSLLLTAIVAVLYYIQSMLSLHGIEDETQKESMRKASLMS 215 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P ++ VF+L S AG+ +YW VI I+QQ VI Sbjct: 216 P--------------IMIGVFSLIS-SAGVTLYWVVGGVIQIIQQFVI 248 >gi|213407522|ref|XP_002174532.1| mitochondrial inner membrane translocase Oxa101 [Schizosaccharomyces japonicus yFS275] gi|212002579|gb|EEB08239.1| mitochondrial inner membrane translocase Oxa101 [Schizosaccharomyces japonicus yFS275] Length = 361 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 26/215 (12%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-----VLQK--AM 415 +I+LTT+ ++ L PL + + + +IQP++ + + K + + V Q A+ Sbjct: 94 SIILTTIGIRSLMLPLTLRSMKNARALSHIQPRVKKYVDAMKAAKLENDTYAVTQNAYAI 153 Query: 416 IQLYKTHNINPLAGCWPILLQIPV----FFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 ++Y+++NINPL ++Q V F+ + K+ S+ ++ W +DL DP Sbjct: 154 QKIYRSNNINPLTVAISPIIQATVFISFFYGLRKMSQASIAGFNSGGLLWFRDLTTYDPY 213 Query: 472 NIF-TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I TL G+L F +S + S + + ++ F Sbjct: 214 YILPTLNGLLVF--------------LSFRENARFGTSSAASSVHMQTFMQLFCLLTPFI 259 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+ + +YW S + + +Q V ++ A++ Sbjct: 260 TCHVPSSVFLYWIPSTMFTAIQALVTRRLDRAKLS 294 >gi|50405829|ref|XP_456555.1| DEHA2A05368p [Debaryomyces hansenii CBS767] gi|49652219|emb|CAG84510.1| DEHA2A05368p [Debaryomyces hansenii] Length = 374 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/209 (20%), Positives = 100/209 (47%), Gaps = 40/209 (19%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS--PPQVLQKAMIQ--LY 419 I++TTV V+ + FPL K ++ A M I+P++D++ ++ +++ P + +Q A + L Sbjct: 116 IIVTTVAVRSVMFPLYVKASINGAKMAKIKPELDQVMQELREAENPQEQVQAAHKRKALM 175 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAADPTN 472 K ++++ +P+ LQ+P+ + ++ + +M + P G W DL DP Sbjct: 176 KDNDVHMSHQMFPV-LQLPIAYGFFQGLR---KMANHPVEGFSTQGNAWFADLTQVDP-- 229 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM-----KMSPPPADKGQAMILNWMPVVF 527 + G+ I+S ++ + M + + ++ ++P++ Sbjct: 230 ----------------YCGLQ--IISAAVVVSMVRLGGETGAAAMNPMMKKVMTYVPILS 271 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F A +++Y++ +++ S +Q V+ Sbjct: 272 IFITKELSAAVVLYFAANSIFSFIQALVL 300 >gi|72160589|ref|YP_288246.1| preprotein translocase YidC subunit [Thermobifida fusca YX] gi|71914321|gb|AAZ54223.1| preprotein translocase YidC subunit [Thermobifida fusca YX] Length = 241 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I T+ ++L PL+ Q + P++ LRE++ +P +++ K +LY Sbjct: 36 IAFLTLAARVLTLPLSYLQVRGEKIRARLAPQLYALRERYGHNPERLVAKTR-ELYAREG 94 Query: 424 INPLAGCWPILLQIPVFFAIYKVISI 449 +P AGC P L Q P+F +Y + ++ Sbjct: 95 ASPFAGCLPALAQAPMFTLLYTLFTV 120 >gi|225575686|ref|ZP_03784296.1| hypothetical protein RUMHYD_03779 [Blautia hydrogenotrophica DSM 10507] gi|225037090|gb|EEG47336.1| hypothetical protein RUMHYD_03779 [Blautia hydrogenotrophica DSM 10507] Length = 429 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 62/115 (53%), Gaps = 8/115 (6%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW I +F +++ + + N G+ I++ T+ + LL PL KQ + +QP+I Sbjct: 22 GW---IMDGIFKVLNSMFG-IENIGLCIIIFTILMYLLMTPLQIKQQKFSKLSAVMQPEI 77 Query: 397 DELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++++K++ Q+ +Q+ +Y+ + ++P C + +Q P+ A+++VI Sbjct: 78 TKIQKKYQGKRDQISMQKMQEETSLVYQKYGVSPTGSCVQLAIQFPILMALWQVI 132 >gi|302331670|gb|ADL21864.1| Preprotein translocase subunit YidC [Corynebacterium pseudotuberculosis 1002] Length = 415 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/235 (20%), Positives = 102/235 (43%), Gaps = 59/235 (25%) Query: 392 IQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV- 446 ++PK+ L+E++++ + Q+ +L+K + + +GC P L+QIPVF +Y+V Sbjct: 79 MRPKLKRLQEEYEEKTDKESILEYQQKQKELHKEYGYSVKSGCVPALIQIPVFLGLYQVL 138 Query: 447 ISISLEMR------HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF------------- 487 + ++ M HAP L ++D + F + LP + Sbjct: 139 LRMARPMEGLDANNHAPI-----GLLSSDDVSAFLESRVSDVPLPAYNAMSAEQFARLNT 193 Query: 488 ----MHVGIWPIIMSLSMFIQMKM--------SPPPADKGQAMILNWMPVVFVF------ 529 +H + P+I++ +F + + D G A+ LN + ++ +F Sbjct: 194 TYDAVHAFVTPLIIAACVFTVINLIISVVRNNYSVDHDSGLAVQLNRLLIIMIFFTPLML 253 Query: 530 ----ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 S PA + +YW +N+ +++Q A++ L+ R++ F K + + Sbjct: 254 ISLGLRSPIPAAICMYWVANNLWTLIQNALMY--------LVLRIKYPFDKEHQA 300 >gi|68535167|ref|YP_249872.1| putative preprotein translocase subunit [Corynebacterium jeikeium K411] gi|68262766|emb|CAI36254.1| putative preprotein translocase subunit [Corynebacterium jeikeium K411] Length = 309 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 4/90 (4%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQ 417 +A++L V V+ L P +Q S+ + NI+PK+ L +++ + L K + Sbjct: 33 LALVLLIVTVRSLLLPFVYRQSYSSRILVNIRPKVYRLEQEYSDDKSAEGRKELGKRRRE 92 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 L K H GC P L+QIPV +Y+++ Sbjct: 93 LQKEHEYRFSDGCIPALIQIPVLLGLYRML 122 >gi|322390080|ref|ZP_08063615.1| SpoIIIJ family protein [Streptococcus parasanguinis ATCC 903] gi|321143207|gb|EFX38650.1| SpoIIIJ family protein [Streptococcus parasanguinis ATCC 903] Length = 305 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 31/228 (13%) Query: 341 FIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPK 395 + +PM + +F NL FGI I++ T+ V+L+ PL K + M ++P Sbjct: 40 LLGRPMGEAIKFFANNLGLGFGIGIIIVTLIVRLIILPLGLYQSWKATYQSEKMNYLKPI 99 Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVISI 449 + ++E+ K + Q + Q+ ++ + + ++ GC P+L+Q+P F A++ Sbjct: 100 LGPIQERMKNASTQEEKLLAQQELMAAQRENGVSMFGGVGCLPLLIQMPFFSALFFAAQH 159 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV-GIWPIIMSLSMFIQMKMS 508 + + + F G +A P+ + T + +Y+ + + GI SM MS Sbjct: 160 TKGVADSSFLG----IALGKPSLLLTAIVAVLYYIQSMLSLHGIEDETQKESMRKASLMS 215 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P ++ VF+L S AG+ +YW VI I+QQ VI Sbjct: 216 P--------------IMIGVFSLIS-SAGVTLYWVVGGVIQIIQQFVI 248 >gi|229829514|ref|ZP_04455583.1| hypothetical protein GCWU000342_01606 [Shuttleworthia satelles DSM 14600] gi|229791945|gb|EEP28059.1| hypothetical protein GCWU000342_01606 [Shuttleworthia satelles DSM 14600] Length = 428 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 10/116 (8%) Query: 342 IAKPMFMLMSYFYNLVGN-FGI-----AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 IA+ + +M+ Y + N FGI I++ T+ + + PL +Q + + I P+ Sbjct: 17 IARVLGWIMNGVYIGLSNVFGIKDIWVTIVVFTIIIYMALLPLTVRQQKFSILQQKIAPE 76 Query: 396 IDELREKFK----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +++K+K Q+ Q+ LY + I+P+ C +++Q+P+ F +Y+VI Sbjct: 77 TKAIQKKYKGKRDQASMMAQQEEQQALYDKYGISPMGSCLQMIIQLPILFGLYRVI 132 >gi|314934160|ref|ZP_07841521.1| putative lipoprotein [Staphylococcus caprae C87] gi|313653065|gb|EFS16826.1| putative lipoprotein [Staphylococcus caprae C87] Length = 290 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 110/233 (47%), Gaps = 33/233 (14%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLA----KKQYVSTAN 388 D +F +PM L+ + N V N +G+AI++ + ++L+ P K ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFNNDYGLAIIILVLVIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + A ++++YK +++NP+ GC P+L+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F + Sbjct: 149 GLYFVLKDKLVNGLSDHPHFLWF-NLTKPD-IWITIIAGVLYF----------------V 190 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ K P + M++ P++ ++ + L +YWS S + ++Q Sbjct: 191 QAYVSSKTMPQEQRQMGYMMMIVSPIMIIWISLQASSALGLYWSVSALFLVIQ 243 >gi|260578639|ref|ZP_05846548.1| membrane protein OxaA [Corynebacterium jeikeium ATCC 43734] gi|258603267|gb|EEW16535.1| membrane protein OxaA [Corynebacterium jeikeium ATCC 43734] Length = 336 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 4/90 (4%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQ 417 +A++L V V+ L P +Q S+ + NI+PK+ L +++ + L K + Sbjct: 60 LALVLLIVTVRSLLLPFVYRQSYSSRILVNIRPKVYRLEQEYSDDKSAEGRKELGKRRRE 119 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 L K H GC P L+QIPV +Y+++ Sbjct: 120 LQKEHEYRFSDGCIPALIQIPVLLGLYRML 149 >gi|300780162|ref|ZP_07090018.1| preprotein translocase YidC subunit [Corynebacterium genitalium ATCC 33030] gi|300534272|gb|EFK55331.1| preprotein translocase YidC subunit [Corynebacterium genitalium ATCC 33030] Length = 387 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 1/86 (1%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ T +++ Q + M+ +QP++ E+R K+K Q + ++YK Sbjct: 34 LAIVFLTFTIRIFLVKPMVNQLRAGRKMQELQPQLQEIRAKYKNDQ-QKMAMETQKVYKE 92 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVI 447 +NPLA C L+Q+PVF ++ V+ Sbjct: 93 AKMNPLASCIVPLVQLPVFIGLFHVL 118 >gi|300859432|ref|YP_003784415.1| hypothetical protein cpfrc_02015 [Corynebacterium pseudotuberculosis FRC41] gi|300686886|gb|ADK29808.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] Length = 406 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/238 (21%), Positives = 101/238 (42%), Gaps = 65/238 (27%) Query: 392 IQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++PK+ L+E++++ + Q+ +L+K + + +GC P L+QIPVF +Y+V+ Sbjct: 70 MRPKLKRLQEEYEEKTDKESILEYQQKQKELHKEYGYSVKSGCVPALIQIPVFLGLYQVL 129 Query: 448 SISLEM----------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF---------- 487 L M HAP L ++D + F + LP + Sbjct: 130 ---LRMARPVEGLDANNHAPI-----GLLSSDDVSAFLESRVSDVPLPAYNAMSAEQFAR 181 Query: 488 -------MHVGIWPIIMSLSMFIQMKM--------SPPPADKGQAMILNWMPVVFVF--- 529 +H + P+I++ +F + + D G A+ LN + ++ +F Sbjct: 182 LNTTYDAVHAFVTPLIIAACVFTVINLIISVVRNNYSVDHDSGLAVQLNRLLIIMIFFTP 241 Query: 530 -------ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 S PA + +YW +N+ +++Q A++ L+ R++ F K + + Sbjct: 242 LMLISLGLRSPIPAAICMYWVANNLWTLIQNALMY--------LVLRIKYPFDKEHQA 291 >gi|223043994|ref|ZP_03614035.1| membrane protein OxaA 2 [Staphylococcus capitis SK14] gi|222442709|gb|EEE48813.1| membrane protein OxaA 2 [Staphylococcus capitis SK14] Length = 290 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 110/233 (47%), Gaps = 33/233 (14%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLA----KKQYVSTAN 388 D +F +PM L+ + N V N +G+AI++ + ++L+ P K ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFNNDYGLAIIILVLVIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + A ++++YK +++NP+ GC P+L+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F + Sbjct: 149 GLYFVLKDKLVNGLSDHPHFLWF-NLTKPD-IWITIIAGVLYF----------------V 190 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ K P + M++ P++ ++ + L +YWS S + ++Q Sbjct: 191 QAYVSSKTMPQEQRQMGYMMMIVSPIMIIWISLQASSALGLYWSVSALFLVIQ 243 >gi|325001534|ref|ZP_08122646.1| putative inner membrane protein translocase component YidC [Pseudonocardia sp. P1] Length = 302 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 10/116 (8%) Query: 341 FIAKPMFMLMSYFYNLVGNF-----GIAIMLTTVF----VKLLFFPLAKKQYVSTANMKN 391 F+ P+ +M ++ L G G+A L+ VF V+ L A + S + Sbjct: 4 FLYYPVSFVMRLWHELFGALLGPASGLAWALSVVFLVLTVRALLVRPAWSRMRSARITRA 63 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + P++ LREK + + L +A L++ H +P+AG LLQIPVF A+ V+ Sbjct: 64 LGPQLTALREKHRHDS-RRLAEATAALHREHGSSPVAGLGTALLQIPVFVALLHVL 118 >gi|302207109|gb|ADL11451.1| Preprotein translocase subunit YidC [Corynebacterium pseudotuberculosis C231] gi|308277364|gb|ADO27263.1| Preprotein translocase subunit YidC [Corynebacterium pseudotuberculosis I19] Length = 415 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/238 (21%), Positives = 101/238 (42%), Gaps = 65/238 (27%) Query: 392 IQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++PK+ L+E++++ + Q+ +L+K + + +GC P L+QIPVF +Y+V+ Sbjct: 79 MRPKLKRLQEEYEEKTDKESILEYQQKQKELHKEYGYSVKSGCVPALIQIPVFLGLYQVL 138 Query: 448 SISLEM----------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF---------- 487 L M HAP L ++D + F + LP + Sbjct: 139 ---LRMARPVEGLDANNHAPI-----GLLSSDDVSAFLESRVSDVPLPAYNAMSAEQFAR 190 Query: 488 -------MHVGIWPIIMSLSMFIQMKM--------SPPPADKGQAMILNWMPVVFVF--- 529 +H + P+I++ +F + + D G A+ LN + ++ +F Sbjct: 191 LNTTYDAVHAFVTPLIIAACVFTVINLIISVVRNNYSVDHDSGLAVQLNRLLIIMIFFTP 250 Query: 530 -------ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 S PA + +YW +N+ +++Q A++ L+ R++ F K + + Sbjct: 251 LMLISLGLRSPIPAAICMYWVANNLWTLIQNALMY--------LVLRIKYPFDKEHQA 300 >gi|312868335|ref|ZP_07728535.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parasanguinis F0405] gi|311096080|gb|EFQ54324.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parasanguinis F0405] Length = 294 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 31/228 (13%) Query: 341 FIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPK 395 + +PM + +F NL FGI I++ T+ V+L+ PL K + M ++P Sbjct: 29 LLGRPMGEAIKFFANNLGLGFGIGIIIVTLIVRLIILPLGLYQSWKATYQSEKMNYLKPI 88 Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVISI 449 + ++E+ K + Q + Q+ ++ + + ++ GC P+L+Q+P F A++ Sbjct: 89 LGPIQERMKNASSQEEKLLAQQELMAAQRENGVSMFGGVGCLPLLIQMPFFSALFFAAQH 148 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV-GIWPIIMSLSMFIQMKMS 508 + + + F G +A P+ + T + +Y+ + + GI SM MS Sbjct: 149 TKGVADSNFLG----IALGKPSLLLTAIVAVLYYIQSMLSLHGIEDETQKESMRKASLMS 204 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P ++ VF+L S AG+ +YW VI I+QQ VI Sbjct: 205 P--------------IMIGVFSLIS-SAGVTLYWVVGGVIQIIQQFVI 237 >gi|74178496|dbj|BAE32503.1| unnamed protein product [Mus musculus] gi|74181916|dbj|BAE32657.1| unnamed protein product [Mus musculus] Length = 433 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 49/217 (22%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ----KAMIQL 418 AI TV + L FPL K A + N P++ + + +++ Q KA I++ Sbjct: 138 AIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQAEFYKATIEM 197 Query: 419 ---YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKDLAA 467 K H+I L L Q PVF + + + EM + P W W +DL Sbjct: 198 TRYQKKHDIKLLRPLILPLTQAPVFISFFIALR---EMANLPVPSLQTGGLW-WFQDLTV 253 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG------QAM--I 519 +DP + P++++ +M+ +++ A+ G Q M I Sbjct: 254 SDPIYVL-------------------PLVVTATMWCVLELG---AETGVQSNDLQFMRNI 291 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + MP+V + FP+ + +YW SNV S+ Q A + Sbjct: 292 IRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQVACL 328 >gi|22537748|ref|NP_688599.1| OxaA-like protein precursor [Streptococcus agalactiae 2603V/R] gi|38503010|sp|Q8DY84|OXAA2_STRA5 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|22534639|gb|AAN00472.1|AE014265_1 lipoprotein, putative [Streptococcus agalactiae 2603V/R] gi|319745517|gb|EFV97819.1| membrane protein [Streptococcus agalactiae ATCC 13813] Length = 310 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 38/226 (16%) Query: 345 PMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKIDEL 399 PM L++YF G FG+AI++ TV V+++ PL K M +P + + Sbjct: 44 PMANLITYFAQHQGLGFGVAIIIVTVIVRVVILPLGLYQSWKASYQAEKMAYFKPLFEPI 103 Query: 400 REKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISISLEM 453 E+ + + Q + A +L N L+ GC P+L+Q+P F AI+ + + Sbjct: 104 NERLRNAKTQEEKLAAQTELMTAQRENGLSMFGGIGCLPLLIQMPFFSAIFFAARYTPGV 163 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--MKMSPPP 511 A F G +L T +I+++ F+Q + M P Sbjct: 164 SSATFLGL--NLGQKSLT---------------------LTVIIAILYFVQSWLSMQGVP 200 Query: 512 ADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ Q M ++ MP++ VF S PA + +YW + SI+QQ V Sbjct: 201 DEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGIFSIIQQLV 246 >gi|313678196|ref|YP_004055936.1| membrane protein [Mycoplasma bovis PG45] gi|312950783|gb|ADR25378.1| putative membrane protein [Mycoplasma bovis PG45] Length = 721 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 14/178 (7%) Query: 389 MKNIQPKIDELREKFKQSPPQVL--QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 +K+ + KID +FK + Q+ + +LYK H INP +L+ +P+F +++V Sbjct: 529 LKSKKAKIDAKYAEFKNNKQMKARQQQEVAELYKKHGINPFDAFVTMLISLPIFIMMWRV 588 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI-------WPIIMSL 499 I E + + G ++ A+ + F YL + V I P I++ Sbjct: 589 IQSLPEFKSTVWLG----ISFAETSWRRLFFSGEWQYLGVLLVVAIVQGVAQFLPQILNR 644 Query: 500 SMFIQ-MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 F + + A K M +VF F F AGL +YW S + +I+Q I Sbjct: 645 KKFKERTSLEEEKALKKANRTQRIMTIVFFFVTLIFSAGLQVYWIISGLWTIIQTLSI 702 >gi|74221219|dbj|BAE42101.1| unnamed protein product [Mus musculus] Length = 433 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 49/217 (22%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ----KAMIQL 418 AI TV + L FPL K A + N P++ + + +++ Q KA I++ Sbjct: 138 AIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQAEFYKATIEM 197 Query: 419 ---YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKDLAA 467 K H+I L L Q PVF + + + EM + P W W +DL Sbjct: 198 TRYQKKHDIKLLRPLILPLTQAPVFISFFIALR---EMANLPVPSLQTGGLW-WFQDLTV 253 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG------QAM--I 519 +DP + P++++ +M+ +++ A+ G Q M I Sbjct: 254 SDPIYVL-------------------PLVVTATMWCVLELG---AETGVQSNDLQFMRNI 291 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + MP+V + FP+ + +YW SNV S+ Q A + Sbjct: 292 IRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQVACL 328 >gi|148704413|gb|EDL36360.1| oxidase assembly 1-like, isoform CRA_d [Mus musculus] Length = 433 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 49/217 (22%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ----KAMIQL 418 AI TV + L FPL K A + N P++ + + +++ Q KA I++ Sbjct: 138 AIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQAEFYKATIEM 197 Query: 419 ---YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKDLAA 467 K H+I L L Q PVF + + + EM + P W W +DL Sbjct: 198 TRYQKKHDIKLLRPLILPLTQAPVFISFFIALR---EMANLPVPSLQTGGLW-WFQDLTV 253 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG------QAM--I 519 +DP + P++++ +M+ +++ A+ G Q M I Sbjct: 254 SDPIYVL-------------------PLVVTATMWCVLELG---AETGVQSNDLQFMRNI 291 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + MP+V + FP+ + +YW SNV S+ Q A + Sbjct: 292 IRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQVACL 328 >gi|76787971|ref|YP_330226.1| OxaA-like protein precursor [Streptococcus agalactiae A909] gi|76563028|gb|ABA45612.1| membrane protein [Streptococcus agalactiae A909] Length = 310 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 38/226 (16%) Query: 345 PMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKIDEL 399 PM L++YF G FG+AI++ TV V+++ PL K M +P + + Sbjct: 44 PMANLITYFAQHQGLGFGVAIIIVTVIVRVVILPLGLYQSWKASYQAEKMAYFKPLFEPI 103 Query: 400 REKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISISLEM 453 E+ + + Q + A +L N L+ GC P+L+Q+P F AI+ + + Sbjct: 104 NERLRNAKTQEEKLAAQTELMTAQRENGLSMFGGIGCLPLLIQMPFFSAIFFAARYTPGV 163 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--MKMSPPP 511 A F G +L T +I+++ F+Q + M P Sbjct: 164 SSATFLGL--NLGQKSLT---------------------LTVIIAILYFVQSWLSMQGVP 200 Query: 512 ADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ Q M ++ MP++ VF S PA + +YW + SI+QQ V Sbjct: 201 DEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGIFSIIQQLV 246 >gi|154503054|ref|ZP_02040114.1| hypothetical protein RUMGNA_00876 [Ruminococcus gnavus ATCC 29149] gi|153796295|gb|EDN78715.1| hypothetical protein RUMGNA_00876 [Ruminococcus gnavus ATCC 29149] Length = 432 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 9/122 (7%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGI-----AIMLTTVFVKLLFFPLAKKQYVSTANM 389 DW IA LM YN + FGI I+L T+ + L PL KQ + Sbjct: 12 DWPIVGQIAWVFGKLMDAIYNFLNLFGIQNIGICIILFTIIIYTLMIPLTIKQQKFSKMQ 71 Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + P+I +L++K+ Q +Q+ +Y+ + +P GC P+++Q+P+ FA+Y Sbjct: 72 SVMMPEIQKLQKKYAGKRDQASMLKMQEEQQLIYEKYGSSPTGGCLPMVIQLPILFALYP 131 Query: 446 VI 447 VI Sbjct: 132 VI 133 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKM------SPPPADKGQAMILN----WMPVVFVFAL 531 F + G + I PI+ L+ FI +K+ + D A +N MP+ VF Sbjct: 247 FSIVGIILAVIIPIMAGLTQFISVKLMQQQQTTTIDPDNPMARSMNSMNYIMPLFSVFMG 306 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 + PAGL +YW+ S ++ VQQ I K Sbjct: 307 FTLPAGLGLYWAISAIVRCVQQMAINK 333 >gi|327462013|gb|EGF08342.1| SpoIIIJ family protein [Streptococcus sanguinis SK1057] Length = 307 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 13/150 (8%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 I +PM + +F G +G+AI++ T+ V+++ PL K + + M + Sbjct: 40 IGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYFKSIF 99 Query: 397 DELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISIS 450 ++E+ K + Q + +A +L N L+ GC P+L+Q+P F A++ + Sbjct: 100 APIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFAAQYT 159 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 + + F WIKDLA +D + + GIL Sbjct: 160 QGVAGSSFL-WIKDLAKSD-LALTAIVGIL 187 >gi|297797165|ref|XP_002866467.1| hypothetical protein ARALYDRAFT_496379 [Arabidopsis lyrata subsp. lyrata] gi|297312302|gb|EFH42726.1| hypothetical protein ARALYDRAFT_496379 [Arabidopsis lyrata subsp. lyrata] Length = 429 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/210 (22%), Positives = 85/210 (40%), Gaps = 33/210 (15%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL-----QKAMIQ 417 +I++ T+ ++ PL KQ T + ++P+++ +RE+ + + QK M Sbjct: 155 SIVVATILIRSSTVPLLIKQMKDTTKLALMRPRLESIREEMQNKGMDSVTMAEGQKKMKN 214 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---WIKDLAAADPTNIF 474 L+K + + P + +Q P+F + I E + G W DL D Sbjct: 215 LFKEYGVTPFTPMKGMFIQGPLFICFFLAIRNMAEKVPSFQTGGALWFTDLTTPD----- 269 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL--- 531 +L+ I P+I L+ I ++ + +G M V FAL Sbjct: 270 SLY--------------ILPVITGLTFLITVECNAQEGMEGNPMAGTVKNVCRGFALLTV 315 Query: 532 ---SSFPAGLIIYWSWSNVISIVQQAVIMK 558 SFP + YW SN+ S++ VI + Sbjct: 316 PMTMSFPQAIFCYWITSNLFSLMYGLVIKR 345 >gi|331086951|ref|ZP_08336027.1| hypothetical protein HMPREF0987_02330 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330409612|gb|EGG89051.1| hypothetical protein HMPREF0987_02330 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 421 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 11/114 (9%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQ 412 + N G+ I+L T+ + PL KQ + + P++ +++K+K Q +Q Sbjct: 38 IENIGLCIILFTIIIYTFMIPLTIKQQKFSKLSAVMNPELQAIQKKYKNKRDQESMLKMQ 97 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP-FWGWIKDL 465 + M +Y + + + GC +++Q P+ A++KVI ++ P + G +KD+ Sbjct: 98 EEMKMVYDKYGTSQMGGCLQLVIQFPILLALWKVI------QNIPAYVGGVKDM 145 >gi|242371581|ref|ZP_04817155.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis M23864:W1] gi|242350701|gb|EES42302.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis M23864:W1] Length = 286 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 110/233 (47%), Gaps = 33/233 (14%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLA----KKQYVSTAN 388 D +F +PM L+ + N V N +G+AI++ + ++L+ P K ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFNNDYGLAIIILVLVIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + A ++++YK +++NP+ GC P+L+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F + Sbjct: 149 GLYFVLKDKLVSGLSAHPHFLWF-NLTKPD-IWITIIAGVLYF----------------I 190 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ K P + M++ P++ ++ + L +YWS S + ++Q Sbjct: 191 QAYVSSKTMPQEQRQMGYMMMIVSPIMIIWISLQASSALGLYWSVSALFLVIQ 243 >gi|227877759|ref|ZP_03995793.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus crispatus JV-V01] gi|256850088|ref|ZP_05555518.1| preprotein translocase subunit YidC [Lactobacillus crispatus MV-1A-US] gi|262047376|ref|ZP_06020333.1| preprotein translocase, YidC subunit [Lactobacillus crispatus MV-3A-US] gi|227862662|gb|EEJ70147.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus crispatus JV-V01] gi|256713060|gb|EEU28051.1| preprotein translocase subunit YidC [Lactobacillus crispatus MV-1A-US] gi|260572350|gb|EEX28913.1| preprotein translocase, YidC subunit [Lactobacillus crispatus MV-3A-US] Length = 321 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/236 (22%), Positives = 107/236 (45%), Gaps = 34/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +GW Y ++ +P+ +M +++G G I++ TV V+++ PL K Sbjct: 39 YGWVYQWLGRPLQNIMIQTAHMIGGDNGAGWGIVIITVVVRVILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ---SPPQVLQKAMIQ--LYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ + +P Q + + Q LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ + F+G + I T+F ++ Y+ +GI Sbjct: 159 WGIYQAVFYSPQLAQSKFFGISLSSKSVVLAIIATVFTVIQGYIS---LIGI-------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K ++ P++ +F SF L +YW+ N++ IVQQ ++ Sbjct: 208 --------PEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIVQQVIV 255 >gi|58037139|ref|NP_081212.1| mitochondrial inner membrane protein OXA1L precursor [Mus musculus] gi|38372481|sp|Q8BGA9|OXA1L_MOUSE RecName: Full=Mitochondrial inner membrane protein OXA1L; AltName: Full=Oxidase assembly 1-like protein; Short=OXA1-like protein; Flags: Precursor gi|26336841|dbj|BAC32104.1| unnamed protein product [Mus musculus] gi|26342657|dbj|BAC34985.1| unnamed protein product [Mus musculus] Length = 433 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 49/217 (22%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ----KAMIQL 418 AI TV + L FPL K A + N P++ + + +++ Q KA I++ Sbjct: 138 AIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQAEFYKATIEM 197 Query: 419 ---YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKDLAA 467 K H+I L L Q PVF + + + EM + P W W +DL Sbjct: 198 TRYQKKHDIKLLRPLILPLTQAPVFISFFIALR---EMANLPVPSLQTGGLW-WFQDLTV 253 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG------QAM--I 519 +DP + P++++ +M+ +++ A+ G Q M I Sbjct: 254 SDPIYVL-------------------PLVVTATMWCVLELG---AETGVQSNDLQFMRNI 291 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + MP+V + FP+ + +YW SNV S+ Q A + Sbjct: 292 IRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQVACL 328 >gi|325663379|ref|ZP_08151829.1| hypothetical protein HMPREF0490_02570 [Lachnospiraceae bacterium 4_1_37FAA] gi|325470833|gb|EGC74063.1| hypothetical protein HMPREF0490_02570 [Lachnospiraceae bacterium 4_1_37FAA] Length = 421 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 11/114 (9%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQ 412 + N G+ I+L T+ + PL KQ + + P++ +++K+K Q +Q Sbjct: 38 IENIGLCIILFTIIIYTFMIPLTIKQQKFSKLSAVMNPELQAIQKKYKNKRDQESMLKMQ 97 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP-FWGWIKDL 465 + M +Y + + + GC +++Q P+ A++KVI ++ P + G +KD+ Sbjct: 98 EEMKMVYDKYGTSQMGGCLQLVIQFPILLALWKVI------QNIPAYVGGVKDM 145 >gi|26346514|dbj|BAC36908.1| unnamed protein product [Mus musculus] Length = 433 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 49/217 (22%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ----KAMIQL 418 AI TV + L FPL K A + N P++ + + +++ Q KA I++ Sbjct: 138 AIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQAEFYKATIEM 197 Query: 419 ---YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKDLAA 467 K H+I L L Q PVF + + + EM + P W W +DL Sbjct: 198 TRYQKKHDIKLLRPLILPLTQAPVFISFFIALR---EMANLPVPSLQTGGLW-WFQDLTV 253 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG------QAM--I 519 +DP + P++++ +M+ +++ A+ G Q M I Sbjct: 254 SDPIYVL-------------------PLVVTATMWCVLELD---AETGVQSNDLQFMRNI 291 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + MP+V + FP+ + +YW SNV S+ Q A + Sbjct: 292 IRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQVACL 328 >gi|259481011|tpe|CBF74158.1| TPA: mitochondrial export translocase Oxa1, putative (AFU_orthologue; AFUA_5G03640) [Aspergillus nidulans FGSC A4] Length = 491 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 25/190 (13%) Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + P Y KDL + D+GW + + Y+ + G +I+ T +F +L Sbjct: 94 QIPERIGYLKDLGL-------DYGWGPSAIVEFMIEHIHIYSGLPWVG-SIIATGIFFRL 145 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQV-LQKAMIQLYKTH---NINP 426 PL + ++A + N QP + ++EK +S QV QK ++ KT+ I P Sbjct: 146 AMAPLFWRAGDTSARLANAQPILAPIKEKMLNAARSGNQVEAQKWRAEMAKTNANLGIVP 205 Query: 427 LAGCWPILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 P++ Q+P+ F ++VI + + A + WI D ADPT ILP Sbjct: 206 RNTFMPLVFQLPIGFGCFRVIEGMAGLPVPGLAAEQFAWINDFTVADPTY------ILPI 259 Query: 483 YLPGFMHVGI 492 +H+ I Sbjct: 260 LCCTVLHLSI 269 >gi|67902484|ref|XP_681498.1| hypothetical protein AN8229.2 [Aspergillus nidulans FGSC A4] gi|40739695|gb|EAA58885.1| hypothetical protein AN8229.2 [Aspergillus nidulans FGSC A4] Length = 484 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 25/190 (13%) Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + P Y KDL + D+GW + + Y+ + G +I+ T +F +L Sbjct: 87 QIPERIGYLKDLGL-------DYGWGPSAIVEFMIEHIHIYSGLPWVG-SIIATGIFFRL 138 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQV-LQKAMIQLYKTH---NINP 426 PL + ++A + N QP + ++EK +S QV QK ++ KT+ I P Sbjct: 139 AMAPLFWRAGDTSARLANAQPILAPIKEKMLNAARSGNQVEAQKWRAEMAKTNANLGIVP 198 Query: 427 LAGCWPILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 P++ Q+P+ F ++VI + + A + WI D ADPT ILP Sbjct: 199 RNTFMPLVFQLPIGFGCFRVIEGMAGLPVPGLAAEQFAWINDFTVADPTY------ILPI 252 Query: 483 YLPGFMHVGI 492 +H+ I Sbjct: 253 LCCTVLHLSI 262 >gi|148704410|gb|EDL36357.1| oxidase assembly 1-like, isoform CRA_a [Mus musculus] Length = 351 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 49/217 (22%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ----KAMIQL 418 AI TV + L FPL K A + N P++ + + +++ Q KA I++ Sbjct: 56 AIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQAEFYKATIEM 115 Query: 419 ---YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKDLAA 467 K H+I L L Q PVF + + + EM + P W W +DL Sbjct: 116 TRYQKKHDIKLLRPLILPLTQAPVFISFFIALR---EMANLPVPSLQTGGLW-WFQDLTV 171 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG------QAM--I 519 +DP + P++++ +M+ +++ A+ G Q M I Sbjct: 172 SDPIYVL-------------------PLVVTATMWCVLELG---AETGVQSNDLQFMRNI 209 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + MP+V + FP+ + +YW SNV S+ Q A + Sbjct: 210 IRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQVACL 246 >gi|256843612|ref|ZP_05549100.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN] gi|312984343|ref|ZP_07791685.1| hypothetical protein LBKG_02299 [Lactobacillus crispatus CTV-05] gi|256615032|gb|EEU20233.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN] gi|310894268|gb|EFQ43348.1| hypothetical protein LBKG_02299 [Lactobacillus crispatus CTV-05] Length = 321 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/236 (22%), Positives = 106/236 (44%), Gaps = 34/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +GW Y ++ +P+ +M ++G G I++ TV V+++ PL K Sbjct: 39 YGWVYQWLGRPLQNIMIQTAQMIGGDNGAGWGIVIITVVVRVILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ---SPPQVLQKAMIQ--LYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ + +P Q + + Q LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ + F+G + I T+F ++ Y+ +GI Sbjct: 159 WGIYQAVFYSPQLAQSKFFGISLSSKSVVLAIIATVFTVIQGYIS---LIGI-------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K ++ P++ +F SF L +YW+ N++ IVQQ ++ Sbjct: 208 --------PEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIVQQVIV 255 >gi|329768493|ref|ZP_08259982.1| hypothetical protein HMPREF0428_01679 [Gemella haemolysans M341] gi|328836721|gb|EGF86376.1| hypothetical protein HMPREF0428_01679 [Gemella haemolysans M341] Length = 293 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 121/255 (47%), Gaps = 42/255 (16%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMKN 391 G+FY K M + ++Y N +G +GI+I++ T+ VK + P KKQ +S+ NM+ Sbjct: 27 GFFYNTFTKNMDVFLAYINNYIGVWGISIIIITLIVKGIILPFMLKNYKKQRISSMNMER 86 Query: 392 IQPKIDELREKFKQ---SPPQV---------------LQKAMIQLYKTHNINP--LAGCW 431 +P++D ++EK KQ S +V LQ+ + ++YK ++ +P Sbjct: 87 AKPELDIVQEKIKQLRESEKRVFSNDERMKIRMEQAELQREIFKIYKKYDCSPAIFGNLI 146 Query: 432 PILLQIPVFFAIYKVIS---ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 PIL+Q P +Y + S ++ ++ F ++ + + I IL +M Sbjct: 147 PILIQAPFVTGLYFTLQNPIYSKDILNSSFL----SISLGEKSYI-----ILILVFIVYM 197 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN--WM-PVVFVFALSSFPAGLIIYWSWS 545 VG I S+ M + P A++ Q M N W+ P++ F + A + IY+ S Sbjct: 198 VVG--KISQSMMQANPMAQTNPEAERMQNMSKNMVWITPIMLTFITYTSIAAIGIYFIVS 255 Query: 546 NVISIVQQAVIMKMH 560 ++ I Q ++ K++ Sbjct: 256 GILVIFQISLGRKLY 270 >gi|154483919|ref|ZP_02026367.1| hypothetical protein EUBVEN_01625 [Eubacterium ventriosum ATCC 27560] gi|149735410|gb|EDM51296.1| hypothetical protein EUBVEN_01625 [Eubacterium ventriosum ATCC 27560] Length = 365 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%) Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLA 428 +L P+ KQ T + P+I E+++K+K Q Q AM + +Y + +P Sbjct: 1 MLMLPMTIKQQKFTKLNAAMNPEIQEIQKKYKDKKNQQSQLAMQEEIKSVYDKYGTSPTG 60 Query: 429 GCWPILLQIPVFFAIYKVI 447 C +++Q+P+ FA+Y+VI Sbjct: 61 SCLQLIIQMPILFALYRVI 79 >gi|25011697|ref|NP_736092.1| OxaA-like protein precursor [Streptococcus agalactiae NEM316] gi|38503012|sp|Q8E3U9|OXAA2_STRA3 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|24413237|emb|CAD47316.1| Unknown [Streptococcus agalactiae NEM316] Length = 310 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 38/226 (16%) Query: 345 PMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKIDEL 399 PM L++YF G FG+AI++ T+ V+++ PL K M +P + + Sbjct: 44 PMANLITYFAQHQGLGFGVAIIIVTIIVRVIILPLGLYQSWKASYQAEKMAYFKPLFEPI 103 Query: 400 REKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISISLEM 453 E+ + + Q + A +L N L+ GC P+L+Q+P F AI+ + + Sbjct: 104 NERLRNAKTQEEKLAAQTELMTAQRENGLSMFGGIGCLPLLIQMPFFSAIFFAARYTPGV 163 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--MKMSPPP 511 A F G +L T +I+++ F+Q + M P Sbjct: 164 SSATFLGL--NLGQKSLT---------------------LTVIIAILYFVQSWLSMQGVP 200 Query: 512 ADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ Q M ++ MP+ VF S PA + +YW + SI+QQ V Sbjct: 201 DEQRQQMKTMMYVMPIAMVFMSISLPASVALYWFIGGIFSIIQQLV 246 >gi|148704412|gb|EDL36359.1| oxidase assembly 1-like, isoform CRA_c [Mus musculus] Length = 411 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 49/217 (22%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ----KAMIQL 418 AI TV + L FPL K A + N P++ + + +++ Q KA I++ Sbjct: 116 AIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQAEFYKATIEM 175 Query: 419 ---YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKDLAA 467 K H+I L L Q PVF + + + EM + P W W +DL Sbjct: 176 TRYQKKHDIKLLRPLILPLTQAPVFISFFIALR---EMANLPVPSLQTGGLW-WFQDLTV 231 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG------QAM--I 519 +DP + P++++ +M+ +++ A+ G Q M I Sbjct: 232 SDPIYVL-------------------PLVVTATMWCVLELG---AETGVQSNDLQFMRNI 269 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + MP+V + FP+ + +YW SNV S+ Q A + Sbjct: 270 IRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQVACL 306 >gi|20073181|gb|AAH27191.1| Oxa1l protein [Mus musculus] Length = 411 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 49/217 (22%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ----KAMIQL 418 AI TV + L FPL K A + N P++ + + +++ Q KA I++ Sbjct: 116 AIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQAEFYKATIEM 175 Query: 419 ---YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKDLAA 467 K H+I L L Q PVF + + + EM + P W W +DL Sbjct: 176 TRYQKKHDIKLLRPLILPLTQAPVFISFFIALR---EMANLPVPSLQTGGLW-WFQDLTV 231 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG------QAM--I 519 +DP + P++++ +M+ +++ A+ G Q M I Sbjct: 232 SDPIYVL-------------------PLVVTATMWCVLELG---AETGVQSNDLQFMRNI 269 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + MP+V + FP+ + +YW SNV S+ Q A + Sbjct: 270 IRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQVACL 306 >gi|295693356|ref|YP_003601966.1| preprotein translocase subunit yidc [Lactobacillus crispatus ST1] gi|295031462|emb|CBL50941.1| Preprotein translocase subunit YidC [Lactobacillus crispatus ST1] Length = 321 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/236 (21%), Positives = 107/236 (45%), Gaps = 34/236 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPL----AKKQYVSTA 387 +GW Y ++ +P+ +M +++G G I++ TV V+++ PL K Sbjct: 39 YGWVYQWLGRPLQNIMIQTAHMIGGDNGAGWGIVIITVVVRVILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ---SPPQVLQKAMIQ--LYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ + +P Q + + Q LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ + F+G + I T+F ++ Y+ +GI Sbjct: 159 WGIYQAVFYSPQLAQSKFFGISLSSKSVVLAIIATVFTVIQGYIS---LIGI-------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K ++ P++ +F SF L +YW+ N++ I+QQ ++ Sbjct: 208 --------PEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIIQQVIV 255 >gi|291548772|emb|CBL25034.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Ruminococcus torques L2-14] Length = 444 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 9/122 (7%) Query: 335 DWGWFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 DW IA + +M+ +N+ + N G+ I++ T+ + L PL KQ + Sbjct: 13 DWPIIKQIAWLLGQVMNGIFNVLSKIGIENIGVCIIIFTIIIYTLMIPLTIKQQKFSKMS 72 Query: 390 KNIQPKIDELREKFKQSPPQ---VLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIYK 445 +QP+I ++++K++ Q + Q+ I L Y+ + + GC P+L+Q+P+ FA+Y Sbjct: 73 AVMQPEIKKIQKKYEGKKDQASMMKQQEEINLVYEKYGTSMTGGCLPMLIQMPILFALYP 132 Query: 446 VI 447 VI Sbjct: 133 VI 134 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 8/81 (9%) Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNW------MPVVFVFALSSFPAG 537 G + + P++ L+ FI +K+ P PA DK M + MP++ VF + PAG Sbjct: 252 GIILAVLIPVLAGLTQFISVKLQPQPAGDDKDNPMASSMKTMTYTMPLISVFMGFTLPAG 311 Query: 538 LIIYWSWSNVISIVQQAVIMK 558 L +YW+ S + +QQ I K Sbjct: 312 LGLYWAASAAVRCIQQLAINK 332 >gi|238917977|ref|YP_002931494.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC 27750] gi|238873337|gb|ACR73047.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC 27750] Length = 423 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 5/84 (5%) Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-----QVLQKAMIQLYKTH 422 T+ VK+L PL KQ T + P+I ++EK+K Q +Q +Y+ + Sbjct: 49 TLLVKMLMLPLQIKQQKMTKLQSVMNPEIKAIQEKYKGKNSDTVAMQKMQAETKAVYEKY 108 Query: 423 NINPLAGCWPILLQIPVFFAIYKV 446 ++ C +L+Q+P+ FA+Y+V Sbjct: 109 GVSQWGSCVQLLIQMPILFALYRV 132 >gi|77408490|ref|ZP_00785228.1| SpoIIIJ family protein [Streptococcus agalactiae COH1] gi|77172932|gb|EAO76063.1| SpoIIIJ family protein [Streptococcus agalactiae COH1] Length = 266 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 33/178 (18%) Query: 388 NMKNIQPKIDELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFF 441 M +P + + E+ + + Q + A +L N L+ GC P+L+Q+P F Sbjct: 48 KMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGGIGCLPLLIQMPFFS 107 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 AI+ + + A F G L + I T +I+++ Sbjct: 108 AIFFAARYTPGVSSATFLG----LNLGQKSLILT-------------------VIIAILY 144 Query: 502 FIQ--MKMSPPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 F+Q + M P ++ Q M ++ MP++ VF S PA + +YW + SI+QQ V Sbjct: 145 FVQSWLSMQGVPDEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGIFSIIQQLV 202 >gi|237749664|ref|ZP_04580144.1| predicted protein [Helicobacter bilis ATCC 43879] gi|229374741|gb|EEO25132.1| predicted protein [Helicobacter bilis ATCC 43879] Length = 147 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 17/143 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF---FPLAKKQYVSTA 387 E ++DW +F + N+G++I+L ++ V L F K+ A Sbjct: 15 EQVLDWAFFTL------------FKASKNYGVSIILLSLVVNLFLLKIFLYTDKKAQQEA 62 Query: 388 NMKN-IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 ++K + +I + +K++ +A+ + +K H I L + LQIP FFA+Y++ Sbjct: 63 DLKEKLDKRIKSWKSVYKRAKLYAFTQALYRQHKYHPIYALRSLGGLALQIPFFFAMYEI 122 Query: 447 ISISLEMRHAPFWGWIKDLAAAD 469 I+ + ++ F WI DL+ D Sbjct: 123 INKAEYLQSVRFL-WIDDLSKPD 144 >gi|149598665|ref|XP_001516970.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 411 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 47/216 (21%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAM--I 416 AI+ TV + L FPL K + N P+I +L + ++ +A + Sbjct: 125 AIVTCTVAARCLIFPLIVKGQREAVKINNHMPEIQKLSARMNEAKMSGDKFEFSRAYSDL 184 Query: 417 QLY-KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAA 468 QLY K H+++PL G L Q P+F + + + EM + P W DL A Sbjct: 185 QLYQKKHDVSPLRGFIVPLAQAPIFISFFIALR---EMAYLPVPSMQSGGLLWFPDLTVA 241 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--------QAMIL 520 DP FY P++++ SM+ +++ A+ G ++ Sbjct: 242 DP-----------FY--------ALPLLVTASMWAVLELG---AETGVNNANLRVMKTVI 279 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 MP+V + FP + YW SN+ S+ Q A + Sbjct: 280 RVMPLVVLPFTIHFPTAVFTYWLSSNLFSLAQVAFL 315 >gi|119493479|ref|ZP_01624146.1| putative inner membrane protein translocase component YidC [Lyngbya sp. PCC 8106] gi|119452662|gb|EAW33842.1| putative inner membrane protein translocase component YidC [Lyngbya sp. PCC 8106] Length = 335 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 10/73 (13%) Query: 389 MKNIQPKIDELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 MK QP + E EK +Q P ++ M ++YK NPLAGC+P++LQ+P+ FA++ Sbjct: 1 MKLTQPLMKERVEKIQQQYKDDPVKQREEMSRVYKELG-NPLAGCFPLVLQMPILFALFA 59 Query: 446 VISISLEMRHAPF 458 +R +PF Sbjct: 60 T------LRGSPF 66 >gi|238916077|ref|YP_002929594.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC 27750] gi|238871437|gb|ACR71147.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC 27750] Length = 633 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 14/207 (6%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +M++ Y L+ ++G+AI+L T+ K++ P++ ++ M +QP I+ + K Sbjct: 11 VMNFCYKLLHDYGLAIILFTLISKIVLLPVSIWVQKNSIKMVKMQPDINRILIKHYGDKD 70 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--SISLEMRHAPFWGWIKDLA 466 ++ ++ +LYK NPLA P+++QI + + VI I+ + + F G+ Sbjct: 71 EIAEEQS-KLYKKEKYNPLASLIPLIIQIILLLGVVAVIKDGINEGVANMKFCGY----- 124 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 D T I T L P V W + ++ + ++ +K MI + V Sbjct: 125 --DLTWITTKQWGLSIITPIIAGVSAWLLCVAQNASNVLQAEQSKLNKYGMMIFS---VG 179 Query: 527 FVFALSSFP-AGLIIYWSWSNVISIVQ 552 L F AG+ +YW+ SN+ +I+Q Sbjct: 180 LSLYLGCFVYAGVALYWTASNIFAILQ 206 >gi|213022848|ref|ZP_03337295.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 74 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%) Query: 501 MFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MF KMSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 1 MFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 59 >gi|259046600|ref|ZP_05737001.1| membrane protein OxaA2 [Granulicatella adiacens ATCC 49175] gi|259036765|gb|EEW38020.1| membrane protein OxaA2 [Granulicatella adiacens ATCC 49175] Length = 315 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 57/231 (24%), Positives = 111/231 (48%), Gaps = 35/231 (15%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMK 390 GW Y ++ P L++ ++ GN+ IAI++ +V V+++ P K V M Sbjct: 41 GWLYEYLVVPTQWLLNQIASMFNGNYAIAIVIVSVLVRVVLMPTQFHQMKSMLVQQEKMA 100 Query: 391 NIQPKIDELREKFKQSP-PQV---LQKAMIQLYKTHNINPL----AGCWPILLQIPVFFA 442 ++P I E+ + +Q+ PQ +Q+ + LYK +N++ + +GC P+L+ +P++ Sbjct: 101 VLKPYIAEITARAEQAATPQEKLEIQQEQMDLYKLNNVSLMGGLGSGCLPLLITLPIWSG 160 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y I +S E+ + F G + ++P + + + S+ Sbjct: 161 LYNAILLSNEISSSDFMG----------------IALGKEFVP--LAIATAALYYIQSLV 202 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALS-SFPAGLIIYWSWSNVISIVQ 552 QM M K Q+ +N++ V +F ++ PAG+ IY+ S +I I+Q Sbjct: 203 SQMGMD--EETKKQSRSMNYILPVMMFMMTFQSPAGVGIYFFASALIQILQ 251 >gi|291547601|emb|CBL20709.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Ruminococcus sp. SR1/5] Length = 440 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 15/147 (10%) Query: 342 IAKPMFMLMSYFYNL------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 IA M +M Y + + N G+ I++ ++ + PL KQ + +QP+ Sbjct: 19 IASVMGWIMDGIYKMLDGLFGIQNIGLCIIIFSILIFAFMTPLQIKQQKFSKLSAIMQPE 78 Query: 396 IDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I ++++K++ Q M + +Y+ + ++P C + +Q+P+ FA+Y+VI Sbjct: 79 IQKIQKKYQGKKDQASMMKMNEETQAVYQKYGVSPTGSCVQLAIQMPILFALYQVI---- 134 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFG 478 R + G +K++ N+ + G Sbjct: 135 -YRIPAYVGSVKNIFTGVVDNLLAVNG 160 >gi|242792517|ref|XP_002481970.1| mitochondrial export translocase Oxa1, putative [Talaromyces stipitatus ATCC 10500] gi|218718558|gb|EED17978.1| mitochondrial export translocase Oxa1, putative [Talaromyces stipitatus ATCC 10500] Length = 527 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 73/311 (23%), Positives = 133/311 (42%), Gaps = 54/311 (17%) Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 AS ++PS S S AR+ + + E T +++T+ G + P I Sbjct: 74 ASSYLPSASVSGLS--------FARFNSTSTLGEETSQAAENVTSL-----GESQLPAID 120 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFM--LMSYFYNLVG-NFGIAIMLTTVFVKLLFF 376 + + + E+ +D+GW FM L+ + + G + +I + ++ F Sbjct: 121 GIPEKIGYLK-ELGLDYGW----GPSAFMEWLIEHIHIWSGIPWWASIAAAALVTRIALF 175 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-------AMIQLYKTHNINPLAG 429 + K + A I+ + ELR++ Q Q Q AM +LY+ H+I Sbjct: 176 HPSLKAADNAAKTGPIKDEAMELRKQRMQMLSQGRQLEAAKAKLAMDELYQKHDIKLWRN 235 Query: 430 CWPILLQIPVFFAIYKVISI-------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 P LLQIP+ F ++V+ +L M H GW+ DL + DP L+ ILP Sbjct: 236 FVP-LLQIPLGFGTFRVVRGMATLPVPALAMEHC---GWVHDLTSYDP-----LY-ILPA 285 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK-GQAMILNWMPVVFVFALSSFPAGLIIY 541 G M+ ++ + +S + G+ + + +P + + ++ PAGL +Y Sbjct: 286 LATGAMY-------FTMKKGVDSGLSGTGSTALGRGLTIG-LPAISLLFIAWQPAGLQLY 337 Query: 542 WSWSNVISIVQ 552 ++ S + S+ Q Sbjct: 338 FAASGLFSLGQ 348 >gi|328787232|ref|XP_391901.3| PREDICTED: mitochondrial inner membrane protein OXA1L-like [Apis mellifera] Length = 426 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 31/203 (15%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQKAM 415 I+LT+ +KLL FP + + A + NI P++ +++E ++ + Sbjct: 156 TIILTSTLIKLLTFPCSISIQKNNAKLNNILPQMVKIQENMTEARKCGNSMEAAHFAAEL 215 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-MRHAPFWGWIKDLAAADPTNIF 474 L+ +NI +PI IP+F A+ ++ S +E ++ W W DL D Sbjct: 216 ETLFLKNNIK----IFPIGAHIPIFIALREMTSKPVESLKEGGLW-WFTDLTLPDQ---- 266 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV-FVFALSS 533 + +LP M+V I + ++ +SP + +PV+ F+FA+ Sbjct: 267 --YYLLPLCTTVTMYV-----ISTRALKNSGNVSPI-----MRHLFKAIPVISFLFAM-R 313 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 FP ++ +W+ SN I++++ ++ Sbjct: 314 FPGAILCHWTISNFITLIENQLL 336 >gi|293363973|ref|ZP_06610709.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma alligatoris A21JP2] gi|292552463|gb|EFF41237.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma alligatoris A21JP2] Length = 610 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 20/176 (11%) Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-----LYKTHNINPLAGCWPILL 435 K V + ++++ K ++ K+K + KA Q LYK HNINPL I++ Sbjct: 408 KSIVGQSIQEDLRGKKAQIEAKYKDFANNKMMKARKQQELQKLYKKHNINPLDQFLSIII 467 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT----LFGILPFYLPGFMHVG 491 +PVFFA+++VI E++ + G + ++ ++F GI+ L + Sbjct: 468 SMPVFFAMWRVIQCMPEIKSTVWLGL--NFSSTSYQSLFAGQWQYLGIIIVALGVQLASQ 525 Query: 492 IWPIIMSLSMF-----IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 + P +++ I + ++K Q +I+ +VF+ F AG+ +YW Sbjct: 526 LLPRLLNKKRLKERISIAENDALKKSEKTQKIIM----LVFLVITVIFTAGVQVYW 577 >gi|326803748|ref|YP_004321566.1| membrane protein insertase, YidC/Oxa1 family [Aerococcus urinae ACS-120-V-Col10a] gi|326651023|gb|AEA01206.1| membrane protein insertase, YidC/Oxa1 family [Aerococcus urinae ACS-120-V-Col10a] Length = 308 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 108/231 (46%), Gaps = 34/231 (14%) Query: 339 FYFIAKPMFML---MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS----TANMKN 391 F IA P+ L ++ F+N GN+G AI+ + ++LL PL KQ S T + Sbjct: 36 FRLIASPINQLIEWLAQFFN--GNYGFAIIGLVIIIRLLLIPLTYKQQTSSILGTEKRRY 93 Query: 392 IQPKIDELREKFK--QSPPQVLQKAMIQ--LYKTHNINPLA--GCWPILLQIPVFFAIYK 445 QP + + +E + ++P + ++ Q K +NI+ GC+P+L+Q+P+ +Y Sbjct: 94 YQPYLMKFQELIQGAETPEEQMEYTRQQQAFMKDNNISLFGNMGCFPLLIQLPILSGMYV 153 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I + + + F+G+ + +P + T+ I+ ++ L I M Sbjct: 154 AIYNNQNIANYNFFGF----SLGEPNLVLTI---------------IFILLSFLQTRISM 194 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + P + Q + +MP++ F + + PA + +Y + + ++QQ I Sbjct: 195 QTMPEEVREQQGKSMLFMPLMLGFVVFNVPAAIGLYLVTTTIWGMLQQLAI 245 >gi|290995957|ref|XP_002680549.1| predicted protein [Naegleria gruberi] gi|284094170|gb|EFC47805.1| predicted protein [Naegleria gruberi] Length = 226 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 38/206 (18%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI---DELREKFKQSPPQVLQKAM--IQ 417 AIM TT+ + L PL ++A + ++P + E+ S + +Q A+ + Sbjct: 9 AIMATTILFRCLVLPLNIGLTRNSARLDQVRPILFEKSEIMASKTASEEEKVQAAVEFQE 68 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP-------FWGWIKDLAAADP 470 K + +PL L+ P+F +++ +S+ H P W W DL++ DP Sbjct: 69 TMKENKCHPLLNIISPLIMAPMFLSVF--VSVERICLHDPECRGTGGLW-WFDDLSSVDP 125 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--SPPPADKGQAM--ILNWMPVV 526 T P+I +++ I ++M + P + + + ++ ++ V Sbjct: 126 TATL-------------------PVISAVTWLISVEMGAAEPRTETMRQVRSVMRFVAAV 166 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQ 552 V + P+G+ +YW SN+ S++Q Sbjct: 167 MVPITGALPSGVFVYWITSNIFSMLQ 192 >gi|104774337|ref|YP_619317.1| hypothetical protein Ldb1491 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514432|ref|YP_813338.1| preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423418|emb|CAI98291.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093747|gb|ABJ58900.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126132|gb|ADY85462.1| Membrane protein oxaA 2 [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 320 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 49/233 (21%), Positives = 102/233 (43%), Gaps = 34/233 (14%) Query: 338 WFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLA-KKQYVSTANMKNI 392 W Y +I P+ + + +G G AI++ T+ V+++ PL +Q+ +T + + Sbjct: 44 WIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLVVRVILMPLMLSQQHKATLQQEKM 103 Query: 393 QPKIDELREKFK------QSPPQVLQKAMIQ--LYKTHNINPLAG--CWPILLQIPVFFA 442 +++ K +P Q + +Q +Y +N++ G C P+L+Q+P+ Sbjct: 104 HLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPLLIQMPIMIG 163 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 IY+ ++ S + + F+G + I T+F ++ Y+ +GI Sbjct: 164 IYQAVAYSNALAKSTFFGISLSSKSMVLAIIATVFALIQSYVA---MIGI---------- 210 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K + P++ +F SF L +YW+ N++ ++QQ + Sbjct: 211 ------PEEQKKTMQATMLMNPIMTLFFSMSFSGTLALYWAVGNLVMVIQQLI 257 >gi|126278077|ref|XP_001379890.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 518 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 49/213 (23%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAM--I 416 AI+ TV +++ FPL K + N P+I + + ++ +A + Sbjct: 226 AIVTCTVVARIMIFPLIVKGQREAVKINNHMPEIQKFSTRMNEAKLSGDKFEFSRAFSEL 285 Query: 417 QLY-KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKDLAA 467 QLY K H+++PL G L Q PVF + + + EM + P W W +DL A Sbjct: 286 QLYQKKHDVSPLRGFIVPLAQAPVFISFFIALR---EMAYLPVPSMQNGGLW-WFQDLTA 341 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--------QAMI 519 ADP L+ + P++++ SM+ +++ A+ G + Sbjct: 342 ADP-----LYAL--------------PLLVTASMWAILELG---AETGVNNANLRMMKTV 379 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +P++ + +FP + YW SN+ S+ Q Sbjct: 380 FRVLPLIVLPFTINFPTAVFTYWFSSNLFSLAQ 412 >gi|47459465|ref|YP_016327.1| putative inner membrane protein translocase component YidC [Mycoplasma mobile 163K] gi|47458795|gb|AAT28116.1| putative preprotein translocase subunit [Mycoplasma mobile 163K] Length = 656 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 19/215 (8%) Query: 357 VGNFGI--AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK---IDELREKFKQSPPQVL 411 + +FGI AI V++ F + K + M+ + PK ID FK + Sbjct: 429 LASFGIIAAIFFVVFLVRIFSFLVTSKSVFAQVKMQELNPKKAKIDAKYAAFKGNKEMER 488 Query: 412 QKA--MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 +KA + QLYK +N+ + IL+ +P+FFA++K+I ++ F G + Sbjct: 489 RKAQEVQQLYKKNNVKLSSQFTSILVSMPIFFAMFKIIQGIPSIKVTTFLGVTYSATSWQ 548 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMS-LSMFIQMKMSPPPADKGQAMIL-------N 521 LF YLP + V + +I + F+ + + + + L N Sbjct: 549 E----LLFNANFAYLPILIVVFVVQLISQFVPRFLTKRRTKERTNVLEREALRKANRTQN 604 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + VF F AG+ IYW + +I+Q + Sbjct: 605 IVSFVFAFFGLVLTAGVQIYWIAGGIFTILQSVFV 639 >gi|261884238|ref|ZP_06008277.1| putative inner membrane protein translocase component YidC [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 67 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 31/48 (64%) Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 D Q I+ ++P++F F +FPAGL +YW +N+ S+ QQ V+ K+ Sbjct: 4 TDPMQEKIMKFLPLIFTFFFVTFPAGLTLYWFINNLCSVAQQLVVNKI 51 >gi|12841194|dbj|BAB25113.1| unnamed protein product [Mus musculus] Length = 433 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 49/217 (22%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ----KAMIQL 418 AI TV + L FPL K A + N P++ + + +++ Q KA I++ Sbjct: 138 AIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQAEFYKATIEM 197 Query: 419 ---YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKDLAA 467 K H+I L L PVF + + + EM + P W W +DL Sbjct: 198 TRYQKKHDIKLLRPLILPLTHAPVFISFFIALR---EMANLPVPSLQTGGLW-WFQDLTV 253 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG------QAM--I 519 +DP + P++++ +M+ +++ A+ G Q M I Sbjct: 254 SDPIYVL-------------------PLVVTATMWCVLELG---AETGVQSNDLQFMRNI 291 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + MP+V + FP+ + +YW SNV S+ Q A + Sbjct: 292 IRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQVACL 328 >gi|74228374|dbj|BAE24033.1| unnamed protein product [Mus musculus] Length = 433 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 49/217 (22%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ----KAMIQL 418 AI TV + L FPL K A + + P++ + + +++ Q KA I++ Sbjct: 138 AIATCTVLARCLVFPLIVKGQREAAKIHHHMPEMQKFSARIREAKLAGDQAEFYKATIEM 197 Query: 419 ---YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKDLAA 467 K H+I L L Q PVF + + + EM + P W W +DL Sbjct: 198 TRYQKKHDIKLLRPLILPLTQAPVFISFFIALR---EMANLPVPSLQTGGLW-WFQDLTV 253 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG------QAM--I 519 +DP + P++++ +M+ +++ A+ G Q M I Sbjct: 254 SDPIYVL-------------------PLVVTATMWCVLELG---AETGVQSNDLQFMRNI 291 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + MP+V + FP+ + +YW SNV S+ Q A + Sbjct: 292 IRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQVACL 328 >gi|296425195|ref|XP_002842128.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638387|emb|CAZ86319.1| unnamed protein product [Tuber melanosporum] Length = 479 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 38/206 (18%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ------SPPQVLQKAMI- 416 I+L+ ++LL FP K + A MK + P L +K + +P V + + Sbjct: 166 IILSVGVLRLLQFPFYLKMSDTAAKMKELNPFAVPLTKKMRDAQIAGDTPGMVAARTELG 225 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADPTN 472 QLY + +PI Q+PVF+ YK + I + W DL+ ADP Sbjct: 226 QLYSRSGVKRRWLFFPIS-QVPVFYGFYKNLRGMSDIPIPELTEGGLSWFTDLSVADP-- 282 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-----DKGQAMILNWMPVV- 526 FYL P+ S S+F Q+ + ++ + ++L ++P+V Sbjct: 283 ---------FYL--------LPMATSASLFAQLSLGGEAGTNLQTEQMKKVLLIFLPLVT 325 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQ 552 FVF S +PA L Y+ +++ S+VQ Sbjct: 326 FVFT-SQWPAVLTFYFLCNSLFSLVQ 350 >gi|77405816|ref|ZP_00782900.1| SpoIIIJ family protein [Streptococcus agalactiae H36B] gi|77412537|ref|ZP_00788832.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111] gi|77161405|gb|EAO72421.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111] gi|77175603|gb|EAO78388.1| SpoIIIJ family protein [Streptococcus agalactiae H36B] Length = 266 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 33/178 (18%) Query: 388 NMKNIQPKIDELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFF 441 M +P + + E+ + + Q + A +L N L+ GC P+L+Q+P F Sbjct: 48 KMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGGIGCLPLLIQMPFFS 107 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 AI+ + + A F G +L T +I+++ Sbjct: 108 AIFFAARYTPGVSSATFLGL--NLGQKSLT---------------------LTVIIAILY 144 Query: 502 FIQ--MKMSPPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 F+Q + M P ++ Q M ++ MP++ VF S PA + +YW + SI+QQ V Sbjct: 145 FVQSWLSMQGVPDEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGIFSIIQQLV 202 >gi|76799037|ref|ZP_00781232.1| Membrane protein oxaA 2 precursor [Streptococcus agalactiae 18RS21] gi|76585623|gb|EAO62186.1| Membrane protein oxaA 2 precursor [Streptococcus agalactiae 18RS21] Length = 266 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 33/178 (18%) Query: 388 NMKNIQPKIDELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFF 441 M +P + + E+ + + Q + A +L N L+ GC P+L+Q+P F Sbjct: 48 KMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGGIGCLPLLIQMPFFS 107 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 AI+ + + A F G +L T +I+++ Sbjct: 108 AIFFAARYTPGVSSATFLGL--NLGQKSLT---------------------LTVIIAILY 144 Query: 502 FIQ--MKMSPPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 F+Q + M P ++ Q M ++ MP++ VF S PA + +YW + SI+QQ V Sbjct: 145 FVQSWLSMQGVPDEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGIFSIIQQLV 202 >gi|325685786|gb|EGD27859.1| membrane protein OxaA 2 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 320 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 49/233 (21%), Positives = 101/233 (43%), Gaps = 34/233 (14%) Query: 338 WFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLA-KKQYVSTANMKNI 392 W Y +I P+ + + +G G AI++ T+ V+++ PL +Q+ +T + + Sbjct: 44 WIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLVVRVILMPLMLSQQHKATLQQEKM 103 Query: 393 QPKIDELREKFK------QSPPQVLQKAMIQ--LYKTHNINPLAG--CWPILLQIPVFFA 442 +++ K +P Q + +Q +Y +N++ G C P+L+Q+P+ Sbjct: 104 HLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPLLIQMPIMIG 163 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 IY+ ++ S + + F+G + I T+F ++ Y+ +GI Sbjct: 164 IYQAVAYSNALAKSTFFGISLSSKSMVLAIIATVFALIQSYVA---MIGI---------- 210 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P K + P++ F SF L +YW+ N++ ++QQ + Sbjct: 211 ------PEEQKKTMQATMLMNPIMTFFFSMSFSGALALYWAVGNLVMVIQQLI 257 >gi|23465352|ref|NP_695955.1| hypothetical protein BL0776 [Bifidobacterium longum NCC2705] gi|296454129|ref|YP_003661272.1| hypothetical protein BLJ_0976 [Bifidobacterium longum subsp. longum JDM301] gi|317483127|ref|ZP_07942125.1| inner membrane insertion protein [Bifidobacterium sp. 12_1_47BFAA] gi|23325994|gb|AAN24591.1| truncated stage III sporulation protein J (SpoIIIJ) homolog [Bifidobacterium longum NCC2705] gi|296183559|gb|ADH00441.1| hypothetical protein BLJ_0976 [Bifidobacterium longum subsp. longum JDM301] gi|316915426|gb|EFV36850.1| inner membrane insertion protein [Bifidobacterium sp. 12_1_47BFAA] Length = 82 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 4/74 (5%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQSP--PQVLQKA 414 + GIAIM + +++ PL Q +T M+ +QP+I ++ K+ ++ P + +Q+ Sbjct: 4 SLGIAIMCLVLIIRICLLPLFFSQMRATQRMQVLQPQIQRIQRKYAARKDPRSKEAMQRE 63 Query: 415 MIQLYKTHNINPLA 428 ++ L + HN NPL Sbjct: 64 IMALQQRHNANPLG 77 >gi|58268112|ref|XP_571212.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|57227446|gb|AAW43905.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 462 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 41/218 (18%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAM 415 AI TTV ++L L + + + P+I EL + K + ++ + + Sbjct: 148 AIAGTTVLIRLCLTRLVVNTQKHSVRLAAVNPQIQELMAEAKVASANKDTHMQTLISQRL 207 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADP- 470 L K HN+NPL L+Q+P+F + ++ ++ L GW+ DL AADP Sbjct: 208 RDLMKEHNVNPLRPLLLPLVQMPIFLTFFSIVRGLANLPLPQLKEGGLGWVTDLTAADPY 267 Query: 471 ----------TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 TN+ FG +P G + FIQ+ L Sbjct: 268 YILPATSLLFTNLVFKFGA--DGVPTAAKAGSPMTTAHMRNFIQL-----------TTFL 314 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ +++ FP+ L+ YW++S +++Q ++ + Sbjct: 315 SFPLIMY------FPSALLFYWTFSTGFTLLQSIILRQ 346 >gi|134112063|ref|XP_775567.1| hypothetical protein CNBE2810 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258226|gb|EAL20920.1| hypothetical protein CNBE2810 [Cryptococcus neoformans var. neoformans B-3501A] Length = 463 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 41/218 (18%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAM 415 AI TTV ++L L + + + P+I EL + K + ++ + + Sbjct: 149 AIAGTTVLIRLCLTRLVVNTQKHSVRLAAVNPQIQELMAEAKVASANKDTHMQTLISQRL 208 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADP- 470 L K HN+NPL L+Q+P+F + ++ ++ L GW+ DL AADP Sbjct: 209 RDLMKEHNVNPLRPLLLPLVQMPIFLTFFSIVRGLANLPLPQLKEGGLGWVTDLTAADPY 268 Query: 471 ----------TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 TN+ FG +P G + FIQ+ L Sbjct: 269 YILPATSLLFTNLVFKFGA--DGVPTAAKAGSPMTTAHMRNFIQL-----------TTFL 315 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ +++ FP+ L+ YW++S +++Q ++ + Sbjct: 316 SFPLIMY------FPSALLFYWTFSTGFTLLQSIILRQ 347 >gi|172039795|ref|YP_001799508.1| putative preprotein translocase subunit [Corynebacterium urealyticum DSM 7109] gi|171851099|emb|CAQ04075.1| putative preprotein translocase subunit [Corynebacterium urealyticum DSM 7109] Length = 315 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 4/90 (4%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +A++ + V+ L PL +Q S+ N+ N++P++ +L +++ +K + Q K Sbjct: 33 VAVIFLVLTVRSLLAPLTLRQIRSSRNLSNLRPQLYQLSQEYVGRTDAESRKELNQRRKQ 92 Query: 422 HNINP----LAGCWPILLQIPVFFAIYKVI 447 + GC P L+QIPVF +Y+++ Sbjct: 93 MQLEGGYRMRDGCLPALIQIPVFVGLYRML 122 >gi|322385984|ref|ZP_08059624.1| SpoIIIJ family protein [Streptococcus cristatus ATCC 51100] gi|321269967|gb|EFX52887.1| SpoIIIJ family protein [Streptococcus cristatus ATCC 51100] Length = 337 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 31/213 (14%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKI 396 + +PM + +F G +G+AI++ T+ V+L+ FPL K + + M +P Sbjct: 71 LGQPMADSIQFFAKNSGLGYGLAIIIVTLIVRLIIFPLGIYQSWKATLQSEKMNYFKPIF 130 Query: 397 DELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFFAIYKVISIS 450 ++E+ + Q + +A +L N L+ GC P+L+Q+P F A++ + Sbjct: 131 APIQERINNAETQEEKLEAQQELMAAQRENGLSMFGGIGCLPLLIQMPFFSALFFAAQYT 190 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV-GIWPIIMSLSMFIQMKMSP 509 + + F G + P+ TL + +Y+ + + GI M MSP Sbjct: 191 NGVASSTFLG----INLGKPSLALTLIVGVLYYIQSVLSLHGIEDETQKAQMKSATYMSP 246 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 M VVF F PA + +YW Sbjct: 247 ------------IMIVVFSFM---SPAAVTLYW 264 >gi|77414384|ref|ZP_00790539.1| SpoIIIJ family protein [Streptococcus agalactiae 515] gi|77159574|gb|EAO70730.1| SpoIIIJ family protein [Streptococcus agalactiae 515] Length = 266 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 33/178 (18%) Query: 388 NMKNIQPKIDELREKFKQSPPQVLQ-KAMIQLYKTHNINPLA-----GCWPILLQIPVFF 441 M +P + + E+ + + Q + A +L N L+ GC P+L+Q+P F Sbjct: 48 KMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGGIGCLPLLIQMPFFS 107 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 AI+ + + A F G +L T +I+++ Sbjct: 108 AIFFAARYTPGVSSATFLGL--NLGQKSLT---------------------LTVIIAILY 144 Query: 502 FIQ--MKMSPPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 F+Q + M P ++ Q M ++ MP+ VF S PA + +YW + SI+QQ V Sbjct: 145 FVQSWLSMQGVPDEQRQQMKTMMYVMPIAMVFMSISLPASVALYWFIGGIFSIIQQLV 202 >gi|254520700|ref|ZP_05132756.1| inner membrane insertion protein [Clostridium sp. 7_2_43FAA] gi|226914449|gb|EEH99650.1| inner membrane insertion protein [Clostridium sp. 7_2_43FAA] Length = 254 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 2/105 (1%) Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A M+ IQP+++ +++K+ PQ +Q + K +N++ GC P LL +P+ FA+Y Sbjct: 61 SNARMQEIQPELNAIQKKYAND-PQKMQAEYSKCMKENNVSMFGGCLPTLLPLPILFALY 119 Query: 445 KV-ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 V ++I P + WI ++ DP I + L YLP + Sbjct: 120 YVFMNIDKGSVVHPSFLWIPNVFEKDPYFIMPVLAFLSTYLPSLL 164 >gi|3688814|gb|AAC62412.1| SpoIIIJ [Bacillus firmus] Length = 108 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 338 WFYFIAKPM-FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +F P+ ++L+S L G+FG++I++ T+ ++L PL KQ S+ M+ ++P++ Sbjct: 35 WNHFFVYPLSWVLISVADLLNGSFGLSIIVVTIGIRLFLLPLMIKQQKSSRAMQALRPEM 94 Query: 397 DELREKFKQS 406 + L++K+ Q Sbjct: 95 EALQKKYGQG 104 >gi|26554487|ref|NP_758421.1| putative inner membrane protein translocase component YidC [Mycoplasma penetrans HF-2] gi|38503022|sp|Q8EU91|OXAA_MYCPE RecName: Full=Membrane protein oxaA gi|26454497|dbj|BAC44825.1| conserved hypothetical protein [Mycoplasma penetrans HF-2] Length = 379 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 12/127 (9%) Query: 335 DWGWFY--FIAKPMFMLMSYFYNLVGNFG-----IAIMLTTVFVKLLFFPLAKKQYVSTA 387 D+G F+ F+ +++S Y L +G + I + ++L+ F ++ + + + Sbjct: 112 DYGPFFGLFVYPGAMLVLSIMYPLRDVWGGLDALLGIFVLLFIIRLITFLISIRSTMQSE 171 Query: 388 NMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 M IQ K+ E+ K+K + Q Q +LYK +NI P A + + +P+F Sbjct: 172 RMSEIQGKLAEINAKYKDVKKDMAMRQKKQLETQELYKKYNIKPFAMFEQMFVTMPIFLI 231 Query: 443 IYKVISI 449 +Y+V++I Sbjct: 232 VYRVVTI 238 >gi|322391336|ref|ZP_08064806.1| SpoIIIJ family protein [Streptococcus peroris ATCC 700780] gi|321145762|gb|EFX41153.1| SpoIIIJ family protein [Streptococcus peroris ATCC 700780] Length = 327 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 11/131 (8%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNI--- 392 F+ PM + Y G FG+AI++ T+ V+LL PL K + + M + Sbjct: 61 FLGAPMGEAIKYLATDKGLGFGVAIIVVTIIVRLLILPLGIYQSWKATLHSEKMNALKDV 120 Query: 393 -QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 +P L+E Q Q+A+ K H I+ L G C+PIL+Q+P F AIY Sbjct: 121 LEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMLGGVGCFPILIQLPFFSAIYFAAQH 180 Query: 450 SLEMRHAPFWG 460 + + A F G Sbjct: 181 TEGVSEASFMG 191 >gi|313124172|ref|YP_004034431.1| preprotein translocase subunit yidc [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280735|gb|ADQ61454.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 320 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 52/233 (22%), Positives = 106/233 (45%), Gaps = 34/233 (14%) Query: 338 WFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLA-KKQYVSTANMKNI 392 W Y +I P+ + + +G G AI++ T+ V+++ PL +Q+ +T + + Sbjct: 44 WIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLGVRVILMPLMLSQQHKATLQQEKM 103 Query: 393 QPKIDELREKFK------QSPPQVLQKAMIQ--LYKTHNINPLAG--CWPILLQIPVFFA 442 +++ K +P Q + +Q +Y +N++ G C P+L+Q+P+ Sbjct: 104 HLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPLLIQMPIMIG 163 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 IY+ ++ S + + F+G + I T+F ++ Y+ +GI P +M Sbjct: 164 IYQAVAYSNALAKSTFFGISLSSKSMVLAIIATVFALIQSYVA---MIGI-PEEQKKTMQ 219 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 M M+P + F F++ SF L +YW+ N++ ++QQ + Sbjct: 220 ATMLMNP--------------IMTFFFSM-SFSGALALYWAVGNLVMVIQQLI 257 >gi|221195498|ref|ZP_03568553.1| 60Kd inner membrane protein [Atopobium rimae ATCC 49626] gi|221184685|gb|EEE17077.1| 60Kd inner membrane protein [Atopobium rimae ATCC 49626] Length = 646 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 26/222 (11%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +AK +++ Y+L G++ AI L T+ K++ PLA ++ M I P++ L+ Sbjct: 5 LAKLFSLIVQPAYDLTGSWWAAIFLFTLATKIILMPLALWTQQNSIVMVKIMPEMFRLKT 64 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 ++ + +++ +L K +PL P+ +Q+ + F + VI H Sbjct: 65 RYF-GDRETIEERQNELNKKAGYHPLLSLIPLAIQVIILFGLVDVI-------HG----- 111 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADKGQA 517 I D A P F G+ P G I P+ +LS K++P ++ +A Sbjct: 112 ITDSGA--PGTEF--LGMTPIIDGGI--TWIMPLAAALSSVALGLASNKINPLQREQSRA 165 Query: 518 M--ILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIVQQAVI 556 N + + L+ + G+ YW SN++SI+ Q V Sbjct: 166 EKNTTNGLSIAMSLVLAIYVVCGMAFYWVCSNLLSILVQVVC 207 >gi|300813188|ref|ZP_07093562.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300495846|gb|EFK30994.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 320 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 52/233 (22%), Positives = 106/233 (45%), Gaps = 34/233 (14%) Query: 338 WFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLA-KKQYVSTANMKNI 392 W Y +I P+ + + +G G AI++ T+ V+++ PL +Q+ +T + + Sbjct: 44 WIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLGVRVILMPLMLSQQHKATLQQEKM 103 Query: 393 QPKIDELREKFK------QSPPQVLQKAMIQ--LYKTHNINPLAG--CWPILLQIPVFFA 442 +++ K +P Q + +Q +Y +N++ G C P+L+Q+P+ Sbjct: 104 HLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPLLIQMPIMIG 163 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 IY+ ++ S + + F+G + I T+F ++ Y+ +GI P +M Sbjct: 164 IYQAVAYSNALAKSTFFGISLSSKSMVLAIIATVFALIQSYVA---MIGI-PEEQKKTMQ 219 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 M M+P + F F++ SF L +YW+ N++ ++QQ + Sbjct: 220 ATMLMNP--------------IMTFFFSM-SFSGALALYWAVGNLVMVIQQLI 257 >gi|302506228|ref|XP_003015071.1| mitochondrial export translocase Oxa1, putative [Arthroderma benhamiae CBS 112371] gi|291178642|gb|EFE34431.1| mitochondrial export translocase Oxa1, putative [Arthroderma benhamiae CBS 112371] Length = 484 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 53/249 (21%), Positives = 98/249 (39%), Gaps = 58/249 (23%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI----AIMLTTVFVKLLFFPLAKKQYVST 386 E+ +D+GW P M+ L G+ A + T V ++++ F + Sbjct: 124 ELGLDYGW-----GPSSMVQFLLETLHITGGLPWWTATVATAVLIRVVLFNSIVSSAEVS 178 Query: 387 ANMKNIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 A +K IQP+ +RE+ + + + L + H I P P LLQIP+ Sbjct: 179 AKLKAIQPRTTPIRERMMHCVRENDNVGALKAKNELALLNQEHGIKPWKAFLP-LLQIPL 237 Query: 440 FFAIYKVISISLEMRHAPFWG-------WIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 F ++V+ M P G W++++ D P+Y Sbjct: 238 GFGCFRVLR---GMSALPVPGLDNESVLWLQNVTMPD-----------PYY--------A 275 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILN---------WMPVVFVFALSSFPAGLIIYWS 543 PI +F+ ++ D G + ++N +P+V F ++ +P L +Y+ Sbjct: 276 IPIATGALIFVALRRG---GDTGLSNLMNSKLGKSVVYSLPIVTAFTMTFWPGILQLYFL 332 Query: 544 WSNVISIVQ 552 + V+S+ Q Sbjct: 333 TTGVLSVCQ 341 >gi|300780240|ref|ZP_07090096.1| membrane protein OxaA [Corynebacterium genitalium ATCC 33030] gi|300534350|gb|EFK55409.1| membrane protein OxaA [Corynebacterium genitalium ATCC 33030] Length = 389 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 4/90 (4%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS--PPQVL--QKAMIQ 417 ++I L + V+ L P + S+ M ++P+ L E++ S P + +KA+ + Sbjct: 34 LSICLLVLTVRGLLVPSYWSTFRSSRKMLMMRPEQIALEERYGASLEPDDITAHEKALKE 93 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 L K + NPL+GC P L+Q+P +Y+++ Sbjct: 94 LNKEYGYNPLSGCIPPLVQLPFILGLYRLL 123 >gi|212704003|ref|ZP_03312131.1| hypothetical protein DESPIG_02056 [Desulfovibrio piger ATCC 29098] gi|212672508|gb|EEB32991.1| hypothetical protein DESPIG_02056 [Desulfovibrio piger ATCC 29098] Length = 846 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 31/203 (15%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----PKIDELREKFKQSPPQVLQKA 414 N+G++I++ + + F PL + + A K +Q P++ +R K+S Q+ Sbjct: 29 NYGLSILVLSCISAVAFIPLGRLAVGTQAREKKLQMIMAPQLARIR---KESKGAERQRR 85 Query: 415 MIQLYKTHNINPLAG---CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + LYK + +PL + + LQIP Y +I +++ P I DL+ D Sbjct: 86 INNLYKRYAYHPLLAVRSAFGVALQIPFLTGAYYMILGLTQLQGQPCL-MIPDLSQPD-- 142 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVF 529 G+L V PI+M++ I +P D QA+I+ + F+ Sbjct: 143 ------GLL-------WGVNALPIVMTVVNIIATLTTPGLTRKDTLQAIIIAFF---FLA 186 Query: 530 ALSSFPAGLIIYWSWSNVISIVQ 552 L + + L+I+W+ +NV ++Q Sbjct: 187 LLYNAASALLIFWTMNNVFFLLQ 209 >gi|212535248|ref|XP_002147780.1| mitochondrial export translocase Oxa1, putative [Penicillium marneffei ATCC 18224] gi|210070179|gb|EEA24269.1| mitochondrial export translocase Oxa1, putative [Penicillium marneffei ATCC 18224] Length = 518 Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 57/268 (21%) Query: 311 GAKEFPTIHH------YEKDLAIPRFEMLIDWGWFYFIAKPMFM--LMSYFYNLVG-NFG 361 G + P+I Y KDL + D+GW FM L+ + + G + Sbjct: 105 GESQLPSIDDIPEKIGYLKDLGL-------DYGW----GPSAFMEWLIEHIHIWGGMPWY 153 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ----KAMIQ 417 +I + + +L F A K + A I+ ++ ELR+K Q Q Q KA ++ Sbjct: 154 ASIAVAAIVTRLALFHPALKAADNAAKTSPIKDEMMELRKKRMQLLSQGRQLDAAKAKVE 213 Query: 418 L---YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAA 467 L Y H+I P LLQIP+ F I++V+ M P G WI DL + Sbjct: 214 LDDLYAKHDIKMWRNFVP-LLQIPLGFGIFRVVR---GMTTLPIPGLVVEEFAWIHDLTS 269 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNWMP 524 DP + +LP GFM+ L+M M K G+++ + +P Sbjct: 270 YDP------YYVLPILTSGFMY---------LAMRKGMDSGVNEMGKTALGRSITIG-LP 313 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + ++ PA L +Y++ S++ S+ Q Sbjct: 314 AMSLLFIAWQPAALQLYFAVSSLFSLGQ 341 >gi|218675211|ref|ZP_03524880.1| putative inner membrane protein translocase component YidC [Rhizobium etli GR56] Length = 42 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 21/31 (67%), Positives = 24/31 (77%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE 31 ME N NYF+AIALSV+IV WQ Y+ PRIE Sbjct: 1 MENNRNYFIAIALSVLIVLGWQFLYMNPRIE 31 >gi|237750773|ref|ZP_04581253.1| predicted protein [Helicobacter bilis ATCC 43879] gi|229373218|gb|EEO23609.1| predicted protein [Helicobacter bilis ATCC 43879] Length = 197 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 12/143 (8%) Query: 359 NFGIAIMLTTVFVKLLFFPLA---KKQYVSTANMK-NIQPKIDELREKFKQSPPQVLQKA 414 N+G++I+L ++ ++L L K+ S +K KI E + FK + LQ Sbjct: 30 NYGVSIILLSLIMQLFMLKLTFYFDKKATSFGALKAQCDSKIKEFKRVFKGAE---LQSY 86 Query: 415 MIQLYKTHNINP---LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + LYK + +P L G + LQIP F A+ ++ + ++ F WI DL+ D Sbjct: 87 IRTLYKQRHFHPIFALFGLGGLALQIPFFIAMIHLVENAEYLQSVRFL-WIDDLSKPDSI 145 Query: 472 NIFTL-FGILPFYLPGFMHVGIW 493 +F L ILP + F + ++ Sbjct: 146 MLFGLSIHILPLLMTAFTLINVF 168 >gi|115450311|ref|NP_001048756.1| Os03g0116000 [Oryza sativa Japonica Group] gi|113547227|dbj|BAF10670.1| Os03g0116000 [Oryza sativa Japonica Group] Length = 440 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 54/241 (22%), Positives = 97/241 (40%), Gaps = 45/241 (18%) Query: 349 LMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID----ELR--- 400 L+ ++L G N+ I LT++ ++ L PL Q +T + ++P+I+ E+R Sbjct: 145 LIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQMKATVKLNAMRPEIEAINLEMRTIS 204 Query: 401 ----------------EKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 E + PQ + ++ + +L+ H + PL + +Q P+F Sbjct: 205 STRIAGNEKSSTRVTDEGSMSTDPQSMLEGKRKLGELFLRHGVTPLTPLKGLFIQAPIFM 264 Query: 442 AIYKVISISLEMRHAPFWG----WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 + + IS +E + F G W DL D I + L F ++ Sbjct: 265 SFFFAISNMVE-KVPSFKGGGIYWFTDLTTPDELLILPMLTSLTF-------------LV 310 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ + +Q M P K M V+ + SFP + YW SN+ S+ V+ Sbjct: 311 TVELNMQDGMEGNPMLKTMKNFSRVMAVLTIPFTMSFPKAIFFYWVTSNLFSLGYGFVLR 370 Query: 558 K 558 K Sbjct: 371 K 371 >gi|15225991|ref|NP_182170.1| OXA1L (INNER MEMBRANE PROTEIN OXA1-LIKE) [Arabidopsis thaliana] gi|38372506|sp|Q9SKD3|OXA1L_ARATH RecName: Full=Mitochondrial inner membrane protein OXA1-like; Flags: Precursor gi|4559387|gb|AAD23047.1| putative cytochrome oxidase biogenesis protein [Arabidopsis thaliana] gi|19347873|gb|AAL85994.1| putative cytochrome oxidase biogenesis protein [Arabidopsis thaliana] gi|24030491|gb|AAN41393.1| putative cytochrome oxidase biogenesis protein [Arabidopsis thaliana] gi|26450688|dbj|BAC42453.1| putative cytochrome oxidase biogenesis protein [Arabidopsis thaliana] gi|330255608|gb|AEC10702.1| inner membrane OXA1-like protein [Arabidopsis thaliana] Length = 431 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 26/102 (25%), Positives = 55/102 (53%), Gaps = 6/102 (5%) Query: 349 LMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF--KQ 405 L+ ++ G N+ +I LTTV ++ + P+ Q +T + ++P+++ELR++ K Sbjct: 143 LIDAVHSFTGLNWWASIALTTVLIRGVTIPILLNQLKATYKLNVLRPQLEELRQEMSTKA 202 Query: 406 SPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 P+ + Q+ M L+K H + P +++Q P+F + + Sbjct: 203 QDPEAMAEGQRRMQLLFKEHGVTPFTPLKGLIIQGPIFISFF 244 >gi|73661782|ref|YP_300563.1| lipoprotein precursor [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494297|dbj|BAE17618.1| truncated lipoprotein precursor [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 191 Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 7/59 (11%) Query: 392 IQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLA---GCWPILLQIPVFFAI 443 +QP+ID L+E K + Q + K ++ YK ++INPL GC PIL+Q+P+ + + Sbjct: 11 VQPQIDTLKENVKLAKTQEEKLEANKLLMDTYKQYDINPLKNMIGCLPILIQLPILYGL 69 >gi|169854710|ref|XP_001834029.1| inner membrane protein OXA1L [Coprinopsis cinerea okayama7#130] gi|116504929|gb|EAU87824.1| inner membrane protein OXA1L [Coprinopsis cinerea okayama7#130] Length = 413 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 103/217 (47%), Gaps = 40/217 (18%) Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHN---I 424 + + P A ++ ++ QP+I + RE+ + + LQ+A +++ K ++ + Sbjct: 156 RFVCVPFALSNIRNSTKLRPFQPQILQARERMTAAQTKRDAIELQRASVEMKKVYSEAGV 215 Query: 425 NPLAG-CWPILLQIPV----FFAIYKVISISLE-MRHA--------PFWG---WIKDLAA 467 +P G P+ Q+P+ FFA+ ++ + +E M+ + P+ G W+ DL Sbjct: 216 SPFTGMILPMFAQLPITIGMFFALKRMAQLPVEQMKESGVAINLDLPWTGPISWLSDLTV 275 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-ILNWMPVV 526 ADPT +LP G +++ I +M S P A G M + + V+ Sbjct: 276 ADPTY------LLPAAFCGLINLQI------AVGAREMDTSNPSA--GHLMNVFRGLSVL 321 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ +SSFP GL + ++ ++IV Q+++++ G Sbjct: 322 TIYFMSSFPQGLFLGLLTTSGLTIV-QSLLLRSDGVR 357 >gi|45201239|ref|NP_986809.1| AGR143Wp [Ashbya gossypii ATCC 10895] gi|12003128|gb|AAG43464.1|AF195007_3 Yer154p [Eremothecium gossypii] gi|44986093|gb|AAS54633.1| AGR143Wp [Ashbya gossypii ATCC 10895] Length = 378 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 46/206 (22%), Positives = 91/206 (44%), Gaps = 42/206 (20%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKAMIQLYKTH 422 I +TTV V+ L FPL K + A ++P++++L RE + Q+A ++ K Sbjct: 114 ICVTTVLVRALLFPLYVKYSDTIAKTSRVKPELEQLTREVMASTDLVEQQQATLKRRKLL 173 Query: 423 NINPLAGCWPI--LLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAADPTNI 473 N + + + +LQ+P+ + + I +M + P G W DLA ADP Sbjct: 174 QENGIKNRYLVVPILQLPLAISFFAAIR---QMANYPVDGFSVQGIWWFADLAQADP--- 227 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-------ILNWMPVV 526 ++G+ ++ +MF M +S + G + ++P++ Sbjct: 228 ---------------YLGLQ--CLTAAMF--MGLSRAGGESGAQQFSPQMRKVFTFLPLL 268 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQ 552 + A + +G+++Y + + V S+ Q Sbjct: 269 TIPATMNLASGVVLYLAVNGVCSVAQ 294 >gi|149249002|ref|XP_001528841.1| hypothetical protein LELG_05767 [Lodderomyces elongisporus NRRL YB-4239] gi|146453330|gb|EDK47586.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 397 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 28/120 (23%), Positives = 60/120 (50%), Gaps = 17/120 (14%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM------IQ 417 I + TV ++++ FPL + + M ++P++D++ ++ K+ +Q M + Sbjct: 133 IAVVTVGIRVVLFPLYVRASANATKMSKVKPQLDQIMKEIKEDDSDSVQNKMKLLEKRKR 192 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAADP 470 L K + I+ +A PI +Q+P + ++ + +M + P G W ++L+A DP Sbjct: 193 LLKENGISTMASLAPI-VQLPFAYGFFQALR---KMANHPVEGFEDQGIWWFENLSAVDP 248 >gi|309805164|ref|ZP_07699216.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 09V1-c] gi|308165398|gb|EFO67629.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 09V1-c] Length = 207 Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust. Identities = 31/148 (20%), Positives = 71/148 (47%), Gaps = 23/148 (15%) Query: 411 LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + +++YK +N++ + G C P+L+Q+P+ IY+ ++ S + + F G ++ + Sbjct: 11 LSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIMIGIYQAVAYSKTLASSSFMG----ISLS 66 Query: 469 DPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 P+ +F + + + + G++ +GI +M I + SP M +VF Sbjct: 67 KPSIVFAVVAAILYLIQGYLSLIGISE-QQKQTMLITVIASP------------LMTLVF 113 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAV 555 + L +Y+ ++ ++QQ + Sbjct: 114 SIM---YSGALGLYFLVGGIVIVIQQLI 138 >gi|274318365|ref|NP_001162055.1| oxidase assembly 1-like [Rattus norvegicus] gi|149063882|gb|EDM14152.1| rCG23545, isoform CRA_c [Rattus norvegicus] Length = 433 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 33/209 (15%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ----KAMIQL 418 AI TV + L FPL K A + N P++ + + +++ Q KA I++ Sbjct: 138 AIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLSGDQAEFYKATIEM 197 Query: 419 ---YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKDLAA 467 K H+I L Q P+F + + + EM + P W W +DL Sbjct: 198 THYQKKHDIKFFRPLILPLTQAPIFISFFIALR---EMANLPVPSLQTGGLW-WFQDLTV 253 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 +DP I+ L ++ + G + +G + S + + ++ MP+ Sbjct: 254 SDP--IYVLPLVVTATMWGVLELGAETGMQSSDLQLMRN------------VIRVMPLAV 299 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + FP+ + +YW SNV S+ Q A + Sbjct: 300 LPVTIHFPSAVFMYWLSSNVFSLCQVACL 328 >gi|149063883|gb|EDM14153.1| rCG23545, isoform CRA_d [Rattus norvegicus] Length = 411 Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust. Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 33/209 (15%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ----KAMIQL 418 AI TV + L FPL K A + N P++ + + +++ Q KA I++ Sbjct: 116 AIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLSGDQAEFYKATIEM 175 Query: 419 ---YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKDLAA 467 K H+I L Q P+F + + + EM + P W W +DL Sbjct: 176 THYQKKHDIKFFRPLILPLTQAPIFISFFIALR---EMANLPVPSLQTGGLW-WFQDLTV 231 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 +DP I+ L ++ + G + +G + S + + ++ MP+ Sbjct: 232 SDP--IYVLPLVVTATMWGVLELGAETGMQSSDLQLMRN------------VIRVMPLAV 277 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + FP+ + +YW SNV S+ Q A + Sbjct: 278 LPVTIHFPSAVFMYWLSSNVFSLCQVACL 306 >gi|283768633|ref|ZP_06341545.1| membrane protein insertase, YidC/Oxa1 family [Bulleidia extructa W1219] gi|283105025|gb|EFC06397.1| membrane protein insertase, YidC/Oxa1 family [Bulleidia extructa W1219] Length = 303 Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust. Identities = 54/237 (22%), Positives = 106/237 (44%), Gaps = 29/237 (12%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+ L+++ ++G G AI L T+ + L K V+ M+ IQP++++++ K++ Sbjct: 62 PLAWLINHLSMIIG-VGGAIALVTIVIHALLAAFTSKSQVAMQRMQLIQPELNKIQRKYE 120 Query: 405 QSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 + M+Q L K ++++P + LQ P+ A++ I + + F G Sbjct: 121 GVSTDSARMKMVQEQQALMKKYDVHPGSMMLVQFLQFPIVMAMFFAIQRAESVAKGSFLG 180 Query: 461 WI------KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM------- 507 I K L N+ +L I+ F L +G ++ L + +Q K Sbjct: 181 MILQVTPMKGLQQLIAGNMASLSYIILFIL----MLGSQFALIKLPLILQKKKAEAEAKK 236 Query: 508 ---SPPPADKG-QAMILNWMPV--VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P G Q +++ +M V + +F + F +G+ YW N++ IV+ ++ K Sbjct: 237 HHRRPEEVGGGSQQVMMQYMMVGMIAIFGFTWF-SGMSYYWFIRNIVDIVKTLIVQK 292 >gi|254416206|ref|ZP_05029960.1| 60Kd inner membrane protein [Microcoleus chthonoplastes PCC 7420] gi|196176888|gb|EDX71898.1| 60Kd inner membrane protein [Microcoleus chthonoplastes PCC 7420] Length = 334 Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 7/47 (14%) Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 Q+ M +L++ NPLAGC+P+LLQ+PV FA++ +R +PF Sbjct: 27 QEEMSKLFQEFG-NPLAGCFPVLLQMPVLFALFAT------LRGSPF 66 >gi|321475104|gb|EFX86068.1| hypothetical protein DAPPUDRAFT_193442 [Daphnia pulex] Length = 444 Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 36/207 (17%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAM---I 416 I + V+ L FPL K + A M N P++ L++K +Q+ + M I Sbjct: 159 CIAIGVFTVRTLMFPLVIKAQRNAAKMTNNMPQLQVLQQKMTDARQAGNAMEAARMGYEI 218 Query: 417 QLY-KTHNINPLAGCWPILLQIPVF----FAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q + K +NPL L+Q PVF FA+ + + +E W DL DP Sbjct: 219 QSFMKEKGLNPLKNLMVPLIQAPVFMSFFFALKGMANAPVESMQYGGLFWFSDLTVCDP- 277 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNW---MPV 525 +Y I P++ S++++ M++ A +G +++ + +P Sbjct: 278 ----------YY--------ILPMLTSVTVWATMELGADSAKLSSQGFPLLIYFFRAIPF 319 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQ 552 + +F ++ YW +NVIS+VQ Sbjct: 320 IMFPITMNFSGAILCYWLTTNVISLVQ 346 >gi|222624078|gb|EEE58210.1| hypothetical protein OsJ_09169 [Oryza sativa Japonica Group] Length = 407 Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust. Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 57/247 (23%) Query: 349 LMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID----ELR--- 400 L+ ++L G N+ I LT++ ++ L PL Q +T + ++P+I+ E+R Sbjct: 112 LIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQMKATVKLNAMRPEIEAINLEMRTIS 171 Query: 401 ----------------EKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 E + PQ + ++ + +L+ H + PL + +Q P+F Sbjct: 172 STRIAGNEKSSTRVTDEGSMSTDPQSMLEGKRKLGELFLRHGVTPLTPLKGLFIQAPIFM 231 Query: 442 AIYKVISISLEMRHAPFWG----WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 + + IS +E + F G W DL D + I P++ Sbjct: 232 SFFFAISNMVE-KVPSFKGGGIYWFTDLTTPD-------------------ELLILPMLT 271 Query: 498 SLSMFIQMKMSPPPADKGQAMIL---NWMPVVFVFALS---SFPAGLIIYWSWSNVISIV 551 SL+ + ++++ +G M+ N+ V+ V + SFP + YW SN+ S+ Sbjct: 272 SLTFLVTVELNMQDGMEGNPMLKTMKNFSRVMAVLTIPFTMSFPKAIFFYWVTSNLFSLG 331 Query: 552 QQAVIMK 558 V+ K Sbjct: 332 YGFVLRK 338 >gi|224001854|ref|XP_002290599.1| cytochrome oxidase-like protein [Thalassiosira pseudonana CCMP1335] gi|220974021|gb|EED92351.1| cytochrome oxidase-like protein [Thalassiosira pseudonana CCMP1335] Length = 231 Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust. Identities = 44/207 (21%), Positives = 89/207 (42%), Gaps = 32/207 (15%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL-QKAMIQ- 417 + + I +TT+ +LL FP+ +++ M ++QP++ ++ + + P Q QK M Q Sbjct: 28 YAVTIGVTTLAARLLLFPIYAAGQRNSSRMAHMQPEMKKIMDATPKQPDQATQQKVMAQT 87 Query: 418 --LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW----------GWIKDL 465 L++ ++ NP+ G L +P+ + + + ++ AP + W DL Sbjct: 88 RALWRKYDCNPMKG-----LVVPL-ASFPFFMGMFFGLKKAPDYFPDLLSNGGLFWFTDL 141 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 ADP I + F ++M+ QM S P + + + + Sbjct: 142 TQADPLMILPVLSAGTF------------LVMTELTKDQMMSSDPVRGRNMVNAMRALAI 189 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQ 552 V V + F + ++ YW +N ++ Q Sbjct: 190 VMVPLTAYFNSAVLCYWVTNNSFTMGQ 216 >gi|260950689|ref|XP_002619641.1| hypothetical protein CLUG_00800 [Clavispora lusitaniae ATCC 42720] gi|238847213|gb|EEQ36677.1| hypothetical protein CLUG_00800 [Clavispora lusitaniae ATCC 42720] Length = 353 Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust. Identities = 41/203 (20%), Positives = 81/203 (39%), Gaps = 29/203 (14%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM---IQLYK 420 I+ T + FPL K + A M ++P++D+L K + AM +LYK Sbjct: 96 IIAGTFIARAFMFPLYVKSSANMAKMARVKPELDQLMNDIKTGDNEDRMLAMRKRTKLYK 155 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAADPTNI 473 + I P + Q+P+ + ++ + +M P G W +DL DP Sbjct: 156 ENGIKTAHSLLP-MAQLPLAYGFFQA---TRKMAAYPVEGFSTQGAYWFQDLTQVDP--Y 209 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 L + + G M G +++ ++ ++ W+P + S Sbjct: 210 LGLQILTALVVTGMMRSGGETGAQAMNPMMK-------------KVMTWLPFASILITQS 256 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 + +++Y++ ++V S Q V+ Sbjct: 257 MSSAVVLYFAANSVFSFFQSLVL 279 >gi|319442315|ref|ZP_07991471.1| putative inner membrane protein translocase component YidC [Corynebacterium variabile DSM 44702] Length = 342 Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 4/97 (4%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK--QSPPQVLQ 412 + V ++ + I+L V V+L+ P A + S+ + N++P + L ++K + ++ + Sbjct: 25 DAVSSWPLTIVLLVVTVRLILLPFAYRALYSSRMLINLRPALHALEVEYKGVKDRDRIRE 84 Query: 413 K--AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 K QL + GC P L+QIP F +Y+++ Sbjct: 85 KMAKRKQLQQDGGYRMRDGCLPALIQIPFFLGLYRIL 121 >gi|164656152|ref|XP_001729204.1| hypothetical protein MGL_3671 [Malassezia globosa CBS 7966] gi|159103094|gb|EDP41990.1| hypothetical protein MGL_3671 [Malassezia globosa CBS 7966] Length = 474 Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust. Identities = 75/360 (20%), Positives = 134/360 (37%), Gaps = 79/360 (21%) Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGIS--DKYWASVFIPSK 267 ++ T G + AV S V QK ++ SNFHE +G+S D+ + Sbjct: 55 SSATEGNEAARKAVFERASEVAQKVEEVP----SNFHERAHEVGLSVHDR------LAQA 104 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 E + HS + G+SI+ + LA Sbjct: 105 EETVHSALTH--------------------EGESIS-----------------HAAQLAT 127 Query: 328 PRFEMLIDWGWF-YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 + L GW + + + + Y+ NL + I++ T ++L PL ++ Sbjct: 128 TDMQELGLGGWSPSGLLQHLLDGVQYYTNL--PWWATIIVVTCGIRLAIAPLLVYVQANS 185 Query: 387 ANMKNIQPK----IDELREKFKQSPPQVLQKAMIQLYK---THNINPLAGCWPILLQIPV 439 + NIQP+ I +L Q +Q A I + K +N +P +Q+P+ Sbjct: 186 IRLSNIQPQMQAMIKDLEYAKSTGNQQEMQNAAINVRKLLSDNNCSPFKSLLLPAVQMPI 245 Query: 440 FFAIYKVISISLEMRHAPF-------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 F + Y ++ + AP W DL ADP + LP Sbjct: 246 FLSFYFALT---GLAKAPLPALTTGGIAWFPDLTLADPY----------YALPIISSAMT 292 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ + + M+ + +L + V+ + +SSFP+ +++YWS +N S+ Q Sbjct: 293 LLVLETGAETGTTAMNQSSQARFMKNVLRGVTVLAAWLISSFPSAVLLYWSTTNTFSLFQ 352 >gi|289167183|ref|YP_003445450.1| oxaA2 [Streptococcus mitis B6] gi|288906748|emb|CBJ21582.1| oxaA2 [Streptococcus mitis B6] Length = 308 Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 31/227 (13%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNI---- 392 I PM + YF N G FG+ I++ T+ V+L+ PL K + + M + Sbjct: 41 IGAPMAEAIKYFANDKGLGFGVGIIIVTIIVRLIILPLGIYQSWKATLHSEKMNALKHVL 100 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 +P L+E Q Q+A+ K H I+ G C+P+LLQ+P F AIY + Sbjct: 101 EPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGIGCFPVLLQMPFFSAIYFAAQHT 160 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLF-GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + A + G + P+ I F GIL + G+ + + + MSP Sbjct: 161 EGVAQASYLG----IPLGSPSMILVAFAGILYYLQSLLSLHGVEDEMQREQIKKMIYMSP 216 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ VF+L S PA + +YW + I+QQ ++ Sbjct: 217 --------------LMIVVFSLFS-PASVTLYWVVGGFMMILQQFIV 248 >gi|134109449|ref|XP_776839.1| hypothetical protein CNBC3300 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259519|gb|EAL22192.1| hypothetical protein CNBC3300 [Cryptococcus neoformans var. neoformans B-3501A] Length = 459 Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 25/146 (17%) Query: 359 NFGIAIMLTTVFVKLLF-FPLA--------KKQYVSTANMKNIQPKIDEL--REKFKQSP 407 +G ++L TV V+ F P++ K Q V MK I ++ E +E K+ Sbjct: 121 GYGTTLILLTVIVRTAFTLPVSLWQKKRAKKMQSVVAPEMKVINEQLAETVAKECRKKGV 180 Query: 408 P---------QVLQKAMIQLYKTHNINPLAGCW-PILLQIPVFFAIYKVISISLEMRHAP 457 + L+KA ++K HNI+P W P++ IP+F + I +L++ +P Sbjct: 181 GYAEYLIELRRQLRKAQKAVHKKHNIHPWVTTWAPLVAHIPIFVTLSLTIRRALDLPGSP 240 Query: 458 FWG----WIKDLAAADPTNIFTLFGI 479 W+ L AD I L G+ Sbjct: 241 MASESFLWLDSLGQADGYGILPLVGM 266 >gi|284931019|gb|ADC30957.1| putative inner membrane protein translocase component YidC [Mycoplasma gallisepticum str. F] Length = 383 Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 5/96 (5%) Query: 384 VSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 ++T M +Q KI E+ K+K + ++ Q ++ +YK H I P A + IP+ Sbjct: 172 LNTERMGEVQGKIAEINAKYKNATDTQSKKMKQIEVMHIYKKHKIKPAALFVQGFVTIPI 231 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 F +YK++S++ ++ +G I DL+ T I + Sbjct: 232 FLIVYKMVSLTRPIKATILFG-IWDLSVTPGTEIIS 266 >gi|322387091|ref|ZP_08060702.1| SpoIIIJ family protein [Streptococcus infantis ATCC 700779] gi|321142078|gb|EFX37572.1| SpoIIIJ family protein [Streptococcus infantis ATCC 700779] Length = 308 Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 31/228 (13%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQ-YVSTANMKN------- 391 F+ PM + YF G FG+AI++ T+ V+L+ PL Q + +T + + Sbjct: 40 FLGAPMGEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMNALKHV 99 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 ++P L+E Q Q+A+ K H I+ G C+P+L+Q+P F AIY Sbjct: 100 LEPHQTRLKEAETQEEKLEAQQALFAAQKEHGISMFGGVGCFPLLIQMPFFSAIYFAAQH 159 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV-GIWPIIMSLSMFIQMKMS 508 + + A F G +A P+ I F + +Y+ + + G+ + + MS Sbjct: 160 TEGVSEASFLG----IALGSPSWILIAFAGILYYVQSLLSLHGVEDETQREQLKKMIYMS 215 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P ++ +F++ S PA + +YW + I+QQ ++ Sbjct: 216 P--------------MMIVMFSIFS-PASVTLYWVVGGFMMILQQFIV 248 >gi|31544213|ref|NP_852791.1| putative inner membrane protein translocase component YidC [Mycoplasma gallisepticum str. R(low)] gi|38502878|sp|P60035|OXAA_MYCGA RecName: Full=Membrane protein oxaA gi|31541057|gb|AAP56359.1| putative inner membrane protein translocase component YidC [Mycoplasma gallisepticum str. R(low)] gi|284930251|gb|ADC30190.1| putative inner membrane protein translocase component YidC [Mycoplasma gallisepticum str. R(high)] Length = 383 Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 5/96 (5%) Query: 384 VSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 ++T M +Q KI E+ K+K + ++ Q ++ +YK H I P A + IP+ Sbjct: 172 LNTERMGEVQGKIAEINAKYKNATDTQSKKMKQIEVMHIYKKHKIKPAALFVQGFVTIPI 231 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 F +YK++S++ ++ +G I DL+ T I + Sbjct: 232 FLIVYKMVSLTRPIKATILFG-IWDLSVTPGTEIIS 266 >gi|58264942|ref|XP_569627.1| cytochrome c oxidase biogenesis-related protein [Cryptococcus neoformans var. neoformans JEC21] gi|57225859|gb|AAW42320.1| cytochrome c oxidase biogenesis-related protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 461 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 25/146 (17%) Query: 359 NFGIAIMLTTVFVKLLF-FPLA--------KKQYVSTANMKNIQPKIDEL--REKFKQSP 407 +G ++L TV V+ F P++ K Q V MK I ++ E +E K+ Sbjct: 121 GYGTTLILLTVIVRTAFTLPVSLWQKKRAKKMQSVVAPEMKVINEQLAETVAKECRKKGV 180 Query: 408 P---------QVLQKAMIQLYKTHNINPLAGCW-PILLQIPVFFAIYKVISISLEMRHAP 457 + L+KA ++K HNI+P W P++ IP+F + I +L++ +P Sbjct: 181 GYAEYLIELRRQLRKAQKAVHKKHNIHPWVTTWAPLVAHIPIFVTLSLTIRRALDLPGSP 240 Query: 458 FWG----WIKDLAAADPTNIFTLFGI 479 W+ L AD I L G+ Sbjct: 241 MASESFLWLDSLGQADGYGILPLVGM 266 >gi|109082863|ref|XP_001099660.1| PREDICTED: mitochondrial inner membrane protein OXA1L [Macaca mulatta] Length = 437 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 55/220 (25%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT- 421 AI TVF + L FPL A + N P+I + + +++ L + YK Sbjct: 143 AIAACTVFARCLIFPLIVVGQREAAKIHNHLPEIQKFSSRVREAK---LAGDDTEFYKAS 199 Query: 422 ---------HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKD 464 H I L Q P+F + + + EM + P W W +D Sbjct: 200 SEMALYQKKHGIKLFKPLILPLTQAPIFLSFFIALR---EMANLPVASLQTGGLW-WFQD 255 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMILNWM 523 L +DPT + P++++ +M+ +++ A+ G Q+ L WM Sbjct: 256 LTVSDPTYVL-------------------PLVVTATMWAVLELG---AETGVQSSDLQWM 293 Query: 524 -------PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P++ + FP + IYW SN+ S+ Q + + Sbjct: 294 RNVIRVMPLIALPVTMHFPTAVFIYWLSSNLFSLGQVSCL 333 >gi|322375832|ref|ZP_08050343.1| SpoIIIJ family protein [Streptococcus sp. C300] gi|321279100|gb|EFX56142.1| SpoIIIJ family protein [Streptococcus sp. C300] Length = 309 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 24/189 (12%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 ++P L+E Q Q+A+ K H I+ G C+PIL+Q+P F AIY Sbjct: 100 LEPHQKRLKEATTQEEKLEAQQALWDTQKEHGISVFGGVGCFPILIQMPFFSAIYFAAQY 159 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLF-GILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F G + P+ I F GIL + G+ + + + MS Sbjct: 160 TDGVASSTFLG----INLGSPSMILVAFAGILYYLQSLLSLHGVEDEMQREQLKKMIYMS 215 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P M VVF F PA + +YW + I+QQ ++ + L Sbjct: 216 P------------LMIVVFSFFA---PASVTLYWVVGGFMMILQQFIVNYV--VRPKLRK 258 Query: 569 RLRSTFSKN 577 ++R F+KN Sbjct: 259 KVREEFAKN 267 >gi|227501853|ref|ZP_03931902.1| possible inner membrane protein translocase component YidC [Corynebacterium accolens ATCC 49725] gi|227077347|gb|EEI15310.1| possible inner membrane protein translocase component YidC [Corynebacterium accolens ATCC 49725] Length = 314 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 11/114 (9%) Query: 345 PMFMLMSYFYNLVGNFG-------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 P+ +M +++ L+G+F ++I+L + V+ + PL S ++P+ Sbjct: 8 PVSGIMKFWHWLIGSFVDESTAWLVSIILLVITVRGIVSPLNWMALRSGRISVLMRPEST 67 Query: 398 ELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + E+ + +IQ L K++N P AGC P L+ IP F +Y+VI Sbjct: 68 RINEQMNHAETTEEMAELIQKQQDLSKSYNYKPAAGCIPPLITIPAFLGLYQVI 121 >gi|306837145|ref|ZP_07470082.1| membrane protein OxaA [Corynebacterium accolens ATCC 49726] gi|304566993|gb|EFM42621.1| membrane protein OxaA [Corynebacterium accolens ATCC 49726] Length = 314 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 11/114 (9%) Query: 345 PMFMLMSYFYNLVGNFG-------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 P+ +M +++ L+G+F ++I+L + V+ + PL S ++P+ Sbjct: 8 PVSGIMKFWHWLIGSFVDEPTAWLVSIILLVITVRGIVSPLNWMALRSGRISVLMRPEST 67 Query: 398 ELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + E+ + +IQ L K++N P AGC P L+ IP F +Y+VI Sbjct: 68 RINEQMNHAETTEEMAELIQKQQDLSKSYNYKPAAGCIPPLITIPAFLGLYQVI 121 >gi|50557420|ref|XP_506118.1| YALI0F32021p [Yarrowia lipolytica] gi|49651988|emb|CAG78932.1| YALI0F32021p [Yarrowia lipolytica] Length = 388 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 29/201 (14%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQL 418 AI TTV V++L FPL + M ++P+++ + EK K + Q++ ++ Sbjct: 126 AIASTTVIVRVLLFPLFVQAANEQGKMSEVKPELNVIDEKLKSAANMTEMQMVAHEKKKI 185 Query: 419 YKTHNINPLAGCWPIL---LQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIF 474 K + I+ + +P+ L I +F I ++ I ++ W ++LAA DP Sbjct: 186 LKKYGISQMKLFYPMAMFPLTIGIFLGIRRMCEIGGVQGLSTEGVLWFQNLAAPDP---- 241 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSL---SMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 ++G+ I ++ S+ + + G IL W P + V L Sbjct: 242 --------------YLGLQVITAAMYMASIRLGSETGTNNLSPGMKKILQWAPWISVPFL 287 Query: 532 SSFPAGLIIYWSWSNVISIVQ 552 PA L++++ + ++ ++Q Sbjct: 288 MKMPAALLLHFFVNGILMLIQ 308 >gi|298709559|emb|CBJ48574.1| Oxa1 or Cox18/Oxa2 homolog, mitochondrial integral inner membrane protein [Ectocarpus siliculosus] Length = 552 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 51/221 (23%), Positives = 96/221 (43%), Gaps = 48/221 (21%) Query: 363 AIMLTTVFVKLLFFP-------LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 AI++ +V ++ P ++K+ + M Q K+ +++ + + +P ++ + AM Sbjct: 257 AIVMVSVAARIAVLPAVATFLGMSKRLNMIKPEMAVHQGKMQDIKNRMEANP-EIKEAAM 315 Query: 416 IQ----------LYKTHNINPLAGCWPILLQIPVFFAIY---KVISISLEMRHAPFWGWI 462 + L K H I+ + Q PVF +++ + + W+ Sbjct: 316 AEMMLVSQEMGNLLKQHRIHFPKMMLSMFAQFPVFISLFLATRDMGTYFPGYMTGGLDWM 375 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQ----- 516 +L A DPT +TL PI+ S SM + M++ S PA G Sbjct: 376 MNLNAPDPT--WTL-----------------PILTSGSMILLMELGSDMPAAHGPDKPNF 416 Query: 517 --AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ M VVFV S PAG+++YW+ +NV ++Q+ + Sbjct: 417 NPKVMFRVMSVVFVPVAFSMPAGVLVYWTTTNVFGMLQRGL 457 >gi|257784091|ref|YP_003179308.1| 60 kDa inner membrane insertion protein [Atopobium parvulum DSM 20469] gi|257472598|gb|ACV50717.1| 60 kDa inner membrane insertion protein [Atopobium parvulum DSM 20469] Length = 679 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 26/210 (12%) Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y+L G++ AI L T K++ PLA ++ M + P+ L+ ++ + ++ Sbjct: 16 YDLTGSWWAAIFLFTFATKIILMPLALWTQQNSIVMVRLMPETFRLKTRYFGDKETIEER 75 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 + +L K +PL P+ +Q+ + F + VI H I D A P Sbjct: 76 SN-ELNKKAGYHPLLSLIPLAIQVVILFGLVDVI-------HG-----ITDSGA--PGTE 120 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADKGQAM--ILNWMPVVF 527 F G+ P G I P+ +LS K++P ++ +A N + + Sbjct: 121 F--LGMTPIIDGGI--TWIMPLAAALSSVALGLASNKLNPLQREQSRAEKNTTNGLSIAM 176 Query: 528 VFALSSF-PAGLIIYWSWSNVISIVQQAVI 556 L+ + G+ YW SN++SI+ Q V Sbjct: 177 SLVLAVYVVCGMAFYWVCSNLLSILVQIVC 206 >gi|289826409|ref|ZP_06545521.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 63 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 31/47 (65%) Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 2 TDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 48 >gi|210619554|ref|ZP_03292045.1| hypothetical protein CLONEX_04279 [Clostridium nexile DSM 1787] gi|210148841|gb|EEA79850.1| hypothetical protein CLONEX_04279 [Clostridium nexile DSM 1787] Length = 247 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 10/75 (13%) Query: 494 PIIMSLSMFIQMKMSPPPADKGQ----------AMILNWMPVVFVFALSSFPAGLIIYWS 543 P++ LS +I K+ G ++N MP++ VF S PAGL IYW Sbjct: 89 PVLSGLSQWISAKLMQQATSTGNDDDNPMAAQMKTMMNVMPLISVFMCFSMPAGLGIYWI 148 Query: 544 WSNVISIVQQAVIMK 558 S V+ +QQ VI K Sbjct: 149 ASAVVRTIQQLVINK 163 >gi|315611871|ref|ZP_07886790.1| SpoIIIJ family protein [Streptococcus sanguinis ATCC 49296] gi|315316049|gb|EFU64082.1| SpoIIIJ family protein [Streptococcus sanguinis ATCC 49296] Length = 312 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 33/249 (13%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNI--- 392 F+ PM + YF G FG+AI++ T+ V+L+ PL K + + M + Sbjct: 43 FLGAPMGEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMNALKHV 102 Query: 393 -QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 +P L+E Q Q+A+ K H I+ L G C+PIL+Q+P F AIY Sbjct: 103 LEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMLGGVGCFPILIQMPFFSAIYFAAQH 162 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + A + G +P P + V ++ L + + Sbjct: 163 TDGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLSLHGVE 203 Query: 510 PPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 + Q + +M P++ VF PA + +YW + I+QQ ++ + L Sbjct: 204 DEMQREQLKKMIYMSPLMIVFFSFFAPASVTLYWVVGGFMMILQQFIVNYV--VRPKLRK 261 Query: 569 RLRSTFSKN 577 ++R F+KN Sbjct: 262 KVREEFAKN 270 >gi|307710735|ref|ZP_07647163.1| membrane protein oxaA 1 [Streptococcus mitis SK321] gi|307617341|gb|EFN96513.1| membrane protein oxaA 1 [Streptococcus mitis SK321] Length = 308 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 31/227 (13%) Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNI---- 392 I PM + YF N G FG+ I++ T+ V+L+ PL K + + M + Sbjct: 41 IGAPMAEAIKYFANDKGLGFGVGIIIVTIIVRLIILPLGIYQSWKATLHSEKMNALKHVL 100 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 +P L+E Q Q+A+ K H I+ G C+PILLQ+P F AIY + Sbjct: 101 EPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIYFAAQHT 160 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + A + G +P P + V I+ L + + Sbjct: 161 EGVAQASYLG-------------------IPLGSPSMILVACAGILYYLQSLLSLHGVED 201 Query: 511 PADKGQAMILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIVQQAVI 556 + Q + +M + + S F PA + +YW + I+QQ ++ Sbjct: 202 EMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIV 248 >gi|71282283|ref|YP_269719.1| hypothetical protein CPS_3020 [Colwellia psychrerythraea 34H] gi|71148023|gb|AAZ28496.1| putative membrane protein [Colwellia psychrerythraea 34H] Length = 216 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 44/205 (21%), Positives = 93/205 (45%), Gaps = 37/205 (18%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANM-------KNIQPKIDELREKFKQSPPQVLQK 413 +AI+L T+ +L+ P+ ++ ANM ++P++D+++ K P ++ K Sbjct: 27 AVAIILFTLIGRLVLMPI---NLLAMANMYRNKKAISALKPELDKIKVIHKDKPNEI-AK 82 Query: 414 AMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + + LYK +NI L I Q F +++ + ++ + WI ++A D Sbjct: 83 STMALYKKNNIKILDKKSVINIASQGVFGFGMFQALQ---QIVFNSKFAWIANIAKPD-V 138 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 + L G++ ++ M M P A++ ++ ++ + L Sbjct: 139 ALALLVGVITYF--------------------SMIMMPGSAEQTSTLLFIIPAIICIITL 178 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 SFP+ + +YW+ S+V S++Q V+ Sbjct: 179 ISFPSAIGLYWATSSVTSLLQSLVL 203 >gi|321254854|ref|XP_003193221.1| cytochrome c oxidase biogenesis-related protein [Cryptococcus gattii WM276] gi|317459690|gb|ADV21434.1| cytochrome c oxidase biogenesis-related protein, putative [Cryptococcus gattii WM276] Length = 460 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%) Query: 411 LQKAMIQLYKTHNINPLAGCW-PILLQIPVFFAIYKVISISLEMRHAPFWG----WIKDL 465 L+KA ++K HNI+P W P++ IP+F + I +L++ +P W+ L Sbjct: 193 LRKAQKAVHKKHNIHPWVTTWAPLMAHIPIFVTLSLTIRRALDLPGSPMASESFLWLDSL 252 Query: 466 AAADPTNIFTLFGI 479 AD I L G+ Sbjct: 253 GQADGYGILPLVGM 266 >gi|306824473|ref|ZP_07457819.1| SpoIIIJ family protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433260|gb|EFM36230.1| SpoIIIJ family protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 312 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 26/190 (13%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 ++P L+E Q Q+A+ K + I+ G C+PIL+Q+P F AIY Sbjct: 103 LEPHQTRLKEATTQEEKLEAQQALFAAQKENGISMFGGVGCFPILIQMPFFSAIYFAAQY 162 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLF-GILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F G ++ P+ I F GIL + G+ + + + MS Sbjct: 163 TDGVSSSTFLG----ISLGSPSMILVAFAGILYYLQSLLSLHGVEDEMQRDQLKKMIYMS 218 Query: 509 PPPADKGQAMILNWMPVVF-VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P M VVF +FA PA + +YW + I+QQ ++ + L Sbjct: 219 P------------LMIVVFSLFA----PASVTLYWVVGGFMMILQQFIVNYV--VRPKLR 260 Query: 568 DRLRSTFSKN 577 ++R F+KN Sbjct: 261 QKVREEFAKN 270 >gi|119183245|ref|XP_001242683.1| hypothetical protein CIMG_06579 [Coccidioides immitis RS] Length = 495 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 37/220 (16%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAM 415 + + VF+++ F +A ++ +QP L+E+ ++ + L++ M Sbjct: 155 STIAAAVFIRVALFKFNLNASDMSAKLRRMQPITKPLQERMLKAVREGNNLEGLKLKQEM 214 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAA 468 + + H + P +LQIP+ F ++V+ M P G W+ D+ + Sbjct: 215 AMIREQHGVKMWKTFVP-MLQIPLGFGFFRVLR---GMSSLPVPGLLSEQFLWLNDITLS 270 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP F ILP G M+ I M + P K +L +PV+ Sbjct: 271 DP------FFILPLVTGGSMYFAI-----KRGGETGMDFANSPLGK---FMLYGLPVIST 316 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIM-----KMHGAE 563 A+S +PA L +Y++ +++++++Q ++ K+ G E Sbjct: 317 TAMSFWPAVLQLYFASTSLLALIQAYLVTSPGFRKLAGVE 356 >gi|210614343|ref|ZP_03290162.1| hypothetical protein CLONEX_02376 [Clostridium nexile DSM 1787] gi|210150687|gb|EEA81696.1| hypothetical protein CLONEX_02376 [Clostridium nexile DSM 1787] Length = 217 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 6/111 (5%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI +F +SY + N G++I++ TV V L P+ KQ + + P+I +++ Sbjct: 22 FIMNGIFNALSYIG--IENIGLSIIIFTVIVYTLMIPMTIKQQKFSRMSAVMNPEIQKIQ 79 Query: 401 EKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K+K Q +Q+ +Y+ + +P GC L+Q P+ FA++ VI Sbjct: 80 KKYKNKKDQASMMKMQEETKLVYEKYGTSPTGGCLGSLIQFPILFALWPVI 130 >gi|108705853|gb|ABF93648.1| 60Kd inner membrane protein, expressed [Oryza sativa Japonica Group] Length = 436 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 41/237 (17%) Query: 349 LMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR------- 400 L+ ++L G N+ I LT++ ++ L PL Q +TA I+ E+R Sbjct: 145 LIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQMKATAMRPEIEAINLEMRTISSTRI 204 Query: 401 ------------EKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 E + PQ + ++ + +L+ H + PL + +Q P+F + + Sbjct: 205 AGNEKSSTRVTDEGSMSTDPQSMLEGKRKLGELFLRHGVTPLTPLKGLFIQAPIFMSFFF 264 Query: 446 VISISLEMRHAPFWG----WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 IS +E + F G W DL D I + L F ++++ + Sbjct: 265 AISNMVE-KVPSFKGGGIYWFTDLTTPDELLILPMLTSLTF-------------LVTVEL 310 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +Q M P K M V+ + SFP + YW SN+ S+ V+ K Sbjct: 311 NMQDGMEGNPMLKTMKNFSRVMAVLTIPFTMSFPKAIFFYWVTSNLFSLGYGFVLRK 367 >gi|331265654|ref|YP_004325284.1| Preprotein translocase subunit YidC2 [Streptococcus oralis Uo5] gi|326682326|emb|CBY99943.1| Preprotein translocase subunit YidC2 [Streptococcus oralis Uo5] Length = 309 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 24/189 (12%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 ++P L+E Q Q+A+ K H I+ G C+PIL+Q+P F AIY Sbjct: 100 LEPHQKRLKEATTQEEKLEAQQALWDTQKEHGISVFGGVGCFPILIQMPFFSAIYFAAQY 159 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLF-GILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F G + P+ + F GIL + G+ + + + MS Sbjct: 160 TDGVASSTFLG----INLGSPSLLLVAFAGILYYLQSLLSLHGVEDEMQREQLKKMIYMS 215 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P M VVF F PA + +YW + I+QQ ++ + L Sbjct: 216 P------------LMIVVFSFFA---PASVTLYWVVGGFMMILQQFIVNYV--VRPKLRK 258 Query: 569 RLRSTFSKN 577 ++R F+KN Sbjct: 259 KVREEFAKN 267 >gi|85662644|gb|AAI12332.1| Oxidase (cytochrome c) assembly 1-like [Homo sapiens] Length = 496 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 61/223 (27%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT- 421 AI TVF + L FPL A + N P+I + + +++ L I+ YK Sbjct: 203 AIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREA---KLAGDHIEYYKAS 259 Query: 422 ---------HNINPLAGCWPILL---QIPVFFAIYKVISISLEMRHAP--------FWGW 461 H I P++L Q P+F + + + EM + P W W Sbjct: 260 SEMALYQKKHGIKLYK---PLILPVTQAPIFISFFIALR---EMANLPVPSLQTGGLW-W 312 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMIL 520 +DL +DP I P+ ++ +M+ +++ A+ G Q+ L Sbjct: 313 FQDLTVSDPIYIL-------------------PLAVTATMWAVLELG---AETGVQSSDL 350 Query: 521 NWM-------PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 WM P++ + FP + +YW SN+ S+VQ + + Sbjct: 351 QWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQVSCL 393 >gi|38372882|sp|Q15070|OXA1L_HUMAN RecName: Full=Mitochondrial inner membrane protein OXA1L; AltName: Full=Hsa; AltName: Full=OXA1Hs; AltName: Full=Oxidase assembly 1-like protein; Short=OXA1-like protein; Flags: Precursor gi|619491|emb|CAA56712.1| OXA1Hs [Homo sapiens] gi|194389996|dbj|BAG60514.1| unnamed protein product [Homo sapiens] Length = 435 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 61/223 (27%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT- 421 AI TVF + L FPL A + N P+I + + +++ L I+ YK Sbjct: 143 AIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREAK---LAGDHIEYYKAS 199 Query: 422 ---------HNINPLAGCWPILL---QIPVFFAIYKVISISLEMRHAP--------FWGW 461 H I P++L Q P+F + + + EM + P W W Sbjct: 200 SEMALYQKKHGIKLYK---PLILPVTQAPIFISFFIALR---EMANLPVPSLQTGGLW-W 252 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMIL 520 +DL +DP I P+ ++ +M+ +++ A+ G Q+ L Sbjct: 253 FQDLTVSDPIYIL-------------------PLAVTATMWAVLELG---AETGVQSSDL 290 Query: 521 NWM-------PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 WM P++ + FP + +YW SN+ S+VQ + + Sbjct: 291 QWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQVSCL 333 >gi|324507050|gb|ADY42997.1| Inner membrane protein OXA1L [Ascaris suum] Length = 379 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 48/219 (21%) Query: 364 IMLTTVFVKL--LFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAMI-- 416 IM T+ ++L +F P+ ++ V+ +M + ++DE RE+ K+ +LQ+ + Sbjct: 121 IMCATMCLRLAMVFVPIMSQKLVAKQSM--YKKELDEFRERIMDAKKEGNNLLQQQVFLE 178 Query: 417 --QLYKTHNINPLAGCWPILLQ-----IPVFFAIYKVISISLEMRHAPFWG-----WIKD 464 K+ +I L + I+L FFAI +++ ++ P W W D Sbjct: 179 QRDFLKSKDIR-LGRQFLIILANGGVFATQFFAIRRMVDVNF-----PGWATGGALWFTD 232 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILN 521 L DP + LP I + M + + ++M G M +L Sbjct: 233 LTIPDP------YYALPL---------ISAVTMGIVARVGIEMGTSTDQMGPGMRLGMLY 277 Query: 522 WMPVVFVFALSS-FPAGLIIYWSWSNVISIVQQAVIMKM 559 +P+ F+F +SS F +GL +YW SN IS++ A++ KM Sbjct: 278 GLPL-FIFVVSSRFASGLCVYWCTSNFISLI-YAMLFKM 314 >gi|303319705|ref|XP_003069852.1| 60Kd inner membrane protein [Coccidioides posadasii C735 delta SOWgp] gi|240109538|gb|EER27707.1| 60Kd inner membrane protein [Coccidioides posadasii C735 delta SOWgp] Length = 495 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 37/220 (16%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAM 415 + + VF+++ F +A ++ +QP L+E+ ++ + L++ M Sbjct: 155 STIAAAVFIRVALFKFNLNASDMSAKLRRMQPITKPLQERMLKAVREGNNLEGLKLKQEM 214 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAA 468 + + H + P +LQIP+ F ++V+ M P G W+ D+ + Sbjct: 215 AMIREQHGVKMWKTFVP-MLQIPLGFGFFRVLR---GMSSLPVPGLLSEQFLWLNDITLS 270 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP F ILP G M+ I M + P K +L +PV+ Sbjct: 271 DP------FFILPLVTGGSMYFAI-----KRGGETGMDFANSPLGK---FMLYGLPVIST 316 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIM-----KMHGAE 563 A+S +PA L +Y++ +++++++Q ++ K+ G E Sbjct: 317 TAMSFWPAVLQLYFASTSLLALIQAYLVTSPGFRKLAGVE 356 >gi|71894609|ref|YP_278717.1| putative inner membrane protein translocase component YidC [Mycoplasma synoviae 53] Length = 629 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 5/91 (5%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK--QSPPQVL---QKAMI 416 IAI++ + +L + K + + ++++ K + K+K ++ Q+ QK + Sbjct: 408 IAILVLVLLTRLFSLFITFKATIVQSAQEDLRVKKAAIENKYKGFENNKQMKMRKQKEIA 467 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 LYK +NIN L G P L+ +P+FFA+++ I Sbjct: 468 DLYKKNNINVLDGFLPQLVAMPIFFAMWRAI 498 >gi|114652024|ref|XP_001156985.1| PREDICTED: oxidase (cytochrome c) assembly 1-like isoform 4 [Pan troglodytes] gi|114652026|ref|XP_509840.2| PREDICTED: mitochondrial inner membrane protein OXA1L isoform 5 [Pan troglodytes] Length = 435 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 61/223 (27%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT- 421 AI TVF + L FPL A + N P+I + + +++ L I+ YK Sbjct: 143 AIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREAK---LAGDHIEYYKAS 199 Query: 422 ---------HNINPLAGCWPILL---QIPVFFAIYKVISISLEMRHAP--------FWGW 461 H I P++L Q P+F + + + EM + P W W Sbjct: 200 SEMALYQKKHGIKLYK---PLILPVTQAPIFISFFIALR---EMANLPVPSLQTGGLW-W 252 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMIL 520 +DL +DP I P+ ++ +M+ +++ A+ G Q+ L Sbjct: 253 FQDLTVSDPIYIL-------------------PLAVTATMWAVLELG---AETGVQSSDL 290 Query: 521 NWM-------PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 WM P++ + FP + +YW SN+ S+VQ + + Sbjct: 291 QWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQVSCL 333 >gi|330841252|ref|XP_003292615.1| hypothetical protein DICPUDRAFT_157354 [Dictyostelium purpureum] gi|325077115|gb|EGC30849.1| hypothetical protein DICPUDRAFT_157354 [Dictyostelium purpureum] Length = 390 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 42/199 (21%), Positives = 86/199 (43%), Gaps = 32/199 (16%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE---LREKFKQSPPQVLQ 412 ++ +A+ +TT FP+ + +A M+ ++ + ++ L + + +++Q Sbjct: 132 IIAGMALALRVTT-------FPVTLRTQRISAKMRMVRLETEKHGYLNDGTTEGRLKLMQ 184 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVF---FAIYKVISISLEMRHAPFWGWIKDLAAAD 469 Q+ K +N++PL+ P L+ +P+ F I + IS + + W L+A D Sbjct: 185 LQQ-QIMKKYNVSPLSAIGPNLVLLPLLIYPFLIIRQISDHTTLLDNTSFLWADSLSAVD 243 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P + +LP F LS + P KG ++ +P++F Sbjct: 244 P------YYLLPILSSAFQL---------LSTRFTLTADTHPLMKGFMYSISVLPLLFTI 288 Query: 530 ALSSFPAGLIIYWSWSNVI 548 F AGL +YW ++++ Sbjct: 289 ---HFSAGLNVYWCTNSIL 304 >gi|320034138|gb|EFW16083.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 495 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 37/220 (16%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAM 415 + + VF+++ F +A ++ +QP L+E+ ++ + L++ M Sbjct: 155 STIAAAVFIRVALFKFNLNASDMSAKLRRMQPITKPLQERMLKAVREGNNLEGLKLKQEM 214 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAA 468 + + H + P +LQIP+ F ++V+ M P G W+ D+ + Sbjct: 215 AMIREQHGVKMWKTFVP-MLQIPLGFGFFRVLR---GMSSLPVPGLLSEQFLWLNDITLS 270 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP F ILP G M+ I M + P K +L +PV+ Sbjct: 271 DP------FFILPLVTGGSMYFAI-----KRGGETGMDFANSPLGK---FMLYGLPVIST 316 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIM-----KMHGAE 563 A+S +PA L +Y++ +++++++Q ++ K+ G E Sbjct: 317 TAMSFWPAVLQLYFASTSLLALIQAYLVTSPGFRKLAGVE 356 >gi|223718097|ref|NP_005006.3| mitochondrial inner membrane protein OXA1L [Homo sapiens] Length = 495 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 61/223 (27%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT- 421 AI TVF + L FPL A + N P+I + + +++ L I+ YK Sbjct: 203 AIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREA---KLAGDHIEYYKAS 259 Query: 422 ---------HNINPLAGCWPILL---QIPVFFAIYKVISISLEMRHAP--------FWGW 461 H I P++L Q P+F + + + EM + P W W Sbjct: 260 SEMALYQKKHGIKLYK---PLILPVTQAPIFISFFIALR---EMANLPVPSLQTGGLW-W 312 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMIL 520 +DL +DP I P+ ++ +M+ +++ A+ G Q+ L Sbjct: 313 FQDLTVSDPIYIL-------------------PLAVTATMWAVLELG---AETGVQSSDL 350 Query: 521 NWM-------PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 WM P++ + FP + +YW SN+ S+VQ + + Sbjct: 351 QWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQVSCL 393 >gi|144575191|gb|AAZ44006.2| conserved hypothetical protein [Mycoplasma synoviae 53] Length = 652 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 5/91 (5%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK--QSPPQVL---QKAMI 416 IAI++ + +L + K + + ++++ K + K+K ++ Q+ QK + Sbjct: 431 IAILVLVLLTRLFSLFITFKATIVQSAQEDLRVKKAAIENKYKGFENNKQMKMRKQKEIA 490 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 LYK +NIN L G P L+ +P+FFA+++ I Sbjct: 491 DLYKKNNINVLDGFLPQLVAMPIFFAMWRAI 521 >gi|2546979|emb|CAA05127.1| OXA1L [Homo sapiens] gi|119586653|gb|EAW66249.1| oxidase (cytochrome c) assembly 1-like [Homo sapiens] Length = 495 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 61/223 (27%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT- 421 AI TVF + L FPL A + N P+I + + +++ L I+ YK Sbjct: 203 AIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREA---KLAGDHIEYYKAS 259 Query: 422 ---------HNINPLAGCWPILL---QIPVFFAIYKVISISLEMRHAP--------FWGW 461 H I P++L Q P+F + + + EM + P W W Sbjct: 260 SEMALYQKKHGIKLYK---PLILPVTQAPIFISFFIALR---EMANLPVPSLQTGGLW-W 312 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMIL 520 +DL +DP I P+ ++ +M+ +++ A+ G Q+ L Sbjct: 313 FQDLTVSDPIYIL-------------------PLAVTATMWAVLELG---AETGVQSSDL 350 Query: 521 NWM-------PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 WM P++ + FP + +YW SN+ S+VQ + + Sbjct: 351 QWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQVSCL 393 >gi|37589026|gb|AAH01669.2| OXA1L protein [Homo sapiens] Length = 437 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 61/223 (27%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT- 421 AI TVF + L FPL A + N P+I + + +++ L I+ YK Sbjct: 145 AIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREAK---LAGDHIEYYKAS 201 Query: 422 ---------HNINPLAGCWPILL---QIPVFFAIYKVISISLEMRHAP--------FWGW 461 H I P++L Q P+F + + + EM + P W W Sbjct: 202 SEMALYQKKHGIKLYK---PLILPVTQAPIFISFFIALR---EMANLPVPSLQTGGLW-W 254 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMIL 520 +DL +DP I P+ ++ +M+ +++ A+ G Q+ L Sbjct: 255 FQDLTVSDPIYIL-------------------PLAVTATMWAVLELG---AETGVQSSDL 292 Query: 521 NWM-------PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 WM P++ + FP + +YW SN+ S+VQ + + Sbjct: 293 QWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQVSCL 335 >gi|114652033|ref|XP_001156862.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] Length = 419 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 61/223 (27%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT- 421 AI TVF + L FPL A + N P+I + + +++ L I+ YK Sbjct: 127 AIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREA---KLAGDHIEYYKAS 183 Query: 422 ---------HNINPLAGCWPILL---QIPVFFAIYKVISISLEMRHAP--------FWGW 461 H I P++L Q P+F + + + EM + P W W Sbjct: 184 SEMALYQKKHGIKLYK---PLILPVTQAPIFISFFIALR---EMANLPVPSLQTGGLW-W 236 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMIL 520 +DL +DP I P+ ++ +M+ +++ A+ G Q+ L Sbjct: 237 FQDLTVSDPIYIL-------------------PLAVTATMWAVLELG---AETGVQSSDL 274 Query: 521 NWM-------PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 WM P++ + FP + +YW SN+ S+VQ + + Sbjct: 275 QWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQVSCL 317 >gi|297694703|ref|XP_002824610.1| PREDICTED: mitochondrial inner membrane protein OXA1L [Pongo abelii] Length = 435 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 61/223 (27%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT- 421 AI TVF + L FPL A + N P+I + + +++ L I+ YK Sbjct: 143 AIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREAK---LAGDHIEYYKAS 199 Query: 422 ---------HNINPLAGCWPILL---QIPVFFAIYKVISISLEMRHAP--------FWGW 461 H I P++L Q P+F + + + EM + P W W Sbjct: 200 SEMAFYQKKHGIKLYK---PLILPVTQAPIFISFFIALR---EMANLPVPSLQTGGLW-W 252 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMIL 520 +DL +DP I P+ ++ +M+ +++ A+ G Q+ L Sbjct: 253 FQDLTVSDPIYIL-------------------PLAVTATMWAVLELG---AETGVQSSDL 290 Query: 521 NWM-------PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 WM P++ + FP + +YW SN+ S+VQ + + Sbjct: 291 QWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQVSCL 333 >gi|238503221|ref|XP_002382844.1| mitochondrial export translocase Oxa1, putative [Aspergillus flavus NRRL3357] gi|220691654|gb|EED48002.1| mitochondrial export translocase Oxa1, putative [Aspergillus flavus NRRL3357] Length = 467 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 30/166 (18%) Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFML---MSYFYNLVG-NFGIAIMLTTVFVKL-LF 375 Y KDL + D+GW P M+ + +F+ G + +I+ T + V+L L Sbjct: 85 YLKDLGL-------DYGW-----GPSSMIEYFIEHFHIWAGLPWWASIVGTGLLVRLALL 132 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLA 428 P+ VST + N++ + LR K Q+ + M+Q L+ H I Sbjct: 133 KPMLSAADVST-KIHNLKDVVAPLRAKMAQAANEKRHADMMQTRAELQQLHSDHGIKFYK 191 Query: 429 GCWPILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADP 470 P +Q+P+ F Y+V+ S+ + A GWIKDL ADP Sbjct: 192 TMIP-FIQLPLGFGCYRVVKGMTSLPVPGLAAESVGWIKDLTVADP 236 >gi|28193182|emb|CAD62333.1| unnamed protein product [Homo sapiens] Length = 419 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 61/223 (27%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT- 421 AI TVF + L FPL A + N P+I + + +++ L I+ YK Sbjct: 127 AIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREA---KLAGDHIEYYKAS 183 Query: 422 ---------HNINPLAGCWPILL---QIPVFFAIYKVISISLEMRHAP--------FWGW 461 H I P++L Q P+F + + + EM + P W W Sbjct: 184 SEMALYQKKHGIKLYK---PLILPVTQAPIFISFFIALR---EMANLPVPSLQTGGLW-W 236 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMIL 520 +DL +DP I P+ ++ +M+ +++ A+ G Q+ L Sbjct: 237 FQDLTVSDPIYIL-------------------PLAVTATMWAVLELG---AETGVQSSDL 274 Query: 521 NWM-------PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 WM P++ + FP + +YW SN+ S+VQ + + Sbjct: 275 QWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQVSCL 317 >gi|195171512|ref|XP_002026549.1| GL21799 [Drosophila persimilis] gi|194111465|gb|EDW33508.1| GL21799 [Drosophila persimilis] Length = 197 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 16/105 (15%) Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MR W W +DL ADP I L YL + +G +S + MK Sbjct: 14 MRDGGLW-WFQDLTLADPFYILPLITSATLYL--TIEIGTDSARLSAANMNTMKY----- 65 Query: 513 DKGQAMILNWMP-VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +L +P V+F F ++ FPA ++ YW+ SN IS+ Q AV+ Sbjct: 66 ------VLRALPLVIFPFTMN-FPAAILTYWACSNFISLGQVAVL 103 >gi|114652028|ref|XP_001156923.1| PREDICTED: oxidase (cytochrome c) assembly 1-like isoform 3 [Pan troglodytes] Length = 408 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 61/223 (27%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT- 421 AI TVF + L FPL A + N P+I + + +++ L I+ YK Sbjct: 143 AIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREA---KLAGDHIEYYKAS 199 Query: 422 ---------HNINPLAGCWPILL---QIPVFFAIYKVISISLEMRHAP--------FWGW 461 H I P++L Q P+F + + + EM + P W W Sbjct: 200 SEMALYQKKHGIKLYK---PLILPVTQAPIFISFFIALR---EMANLPVPSLQTGGLW-W 252 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMIL 520 +DL +DP I P+ ++ +M+ +++ A+ G Q+ L Sbjct: 253 FQDLTVSDPIYIL-------------------PLAVTATMWAVLELG---AETGVQSSDL 290 Query: 521 NWM-------PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 WM P++ + FP + +YW SN+ S+VQ + + Sbjct: 291 QWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQVSCL 333 >gi|317148369|ref|XP_001822724.2| hypothetical protein AOR_1_948134 [Aspergillus oryzae RIB40] Length = 497 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 36/169 (21%) Query: 321 YEKDLAIPRFEMLIDWGWF------YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKL 373 Y KDL + D+GW YFI +F+ G + +I+ T + V+L Sbjct: 115 YLKDLGL-------DYGWGPSSMIEYFI--------EHFHIWAGLPWWASIVGTGLLVRL 159 Query: 374 -LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-------LYKTHNIN 425 L P+ VST + N++ + LR K Q+ + M+Q L+ H I Sbjct: 160 ALLKPMLSAADVST-KIHNLKDVVAPLRAKMAQAANEKRHADMMQTRAELQQLHSDHGIK 218 Query: 426 PLAGCWPILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADP 470 P +Q+P+ F Y+V+ S+ + A GWIKDL ADP Sbjct: 219 FYKTMIP-FIQLPLGFGCYRVVKGMTSLPVPGLAAESVGWIKDLTVADP 266 >gi|255324091|ref|ZP_05365215.1| putative membrane protein [Corynebacterium tuberculostearicum SK141] gi|255298792|gb|EET78085.1| putative membrane protein [Corynebacterium tuberculostearicum SK141] Length = 314 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 11/114 (9%) Query: 345 PMFMLMSYFYNLVGNFG-------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 P+ +M +++ L+ +F I+I+L + V+ + PL S I+P+ + Sbjct: 8 PVSGIMKFWHWLISSFVGESTAWLISIILLVITVRGVVVPLNWISVRSARIGALIRPENN 67 Query: 398 ELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++++ + ++Q L K++N NP AGC P L+ IP F +Y+V+ Sbjct: 68 RIKKQMNSATTTEEMAELMQEEKNLMKSYNYNPAAGCVPPLIMIPAFIGLYQVL 121 >gi|83771459|dbj|BAE61591.1| unnamed protein product [Aspergillus oryzae] Length = 467 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 30/166 (18%) Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFML---MSYFYNLVG-NFGIAIMLTTVFVKL-LF 375 Y KDL + D+GW P M+ + +F+ G + +I+ T + V+L L Sbjct: 85 YLKDLGL-------DYGW-----GPSSMIEYFIEHFHIWAGLPWWASIVGTGLLVRLALL 132 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLA 428 P+ VST + N++ + LR K Q+ + M+Q L+ H I Sbjct: 133 KPMLSAADVST-KIHNLKDVVAPLRAKMAQAANEKRHADMMQTRAELQQLHSDHGIKFYK 191 Query: 429 GCWPILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADP 470 P +Q+P+ F Y+V+ S+ + A GWIKDL ADP Sbjct: 192 TMIP-FIQLPLGFGCYRVVKGMTSLPVPGLAAESVGWIKDLTVADP 236 >gi|307702984|ref|ZP_07639931.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037] gi|307623377|gb|EFO02367.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037] Length = 309 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 24/189 (12%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 ++P L+E Q Q+A+ K H I+ G C+PIL+Q+P F AIY Sbjct: 100 LEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILIQMPFFSAIYFAAQY 159 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLF-GILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F G DL + P+ + F GIL + G+ + + + +S Sbjct: 160 TDGVASSTFLGI--DLGS--PSLLLVAFAGILYYLQSLLSLHGVEDEMQRDQLKRMIYVS 215 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P M VVF F PA + +YW + I+QQ ++ + L Sbjct: 216 P------------LMIVVFSFFA---PASVTLYWVVGGFMMILQQFIVNYV--VRPKLRK 258 Query: 569 RLRSTFSKN 577 ++R F+KN Sbjct: 259 KVREEFAKN 267 >gi|293364737|ref|ZP_06611454.1| SpoIIIJ family protein [Streptococcus oralis ATCC 35037] gi|291316187|gb|EFE56623.1| SpoIIIJ family protein [Streptococcus oralis ATCC 35037] Length = 312 Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 24/189 (12%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 ++P L+E Q Q+A+ K H I+ G C+PIL+Q+P F AIY Sbjct: 103 LEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILIQMPFFSAIYFAAQY 162 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLF-GILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + + F G DL + P+ + F GIL + G+ + + + +S Sbjct: 163 TDGVASSTFLGI--DLGS--PSLLLVAFAGILYYLQSLLSLHGVEDEMQRDQLKRMIYVS 218 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P M VVF F PA + +YW + I+QQ ++ + L Sbjct: 219 P------------LMIVVFSFFA---PASVTLYWVVGGFMMILQQFIVNYV--VRPKLRK 261 Query: 569 RLRSTFSKN 577 ++R F+KN Sbjct: 262 KVREEFAKN 270 >gi|311740346|ref|ZP_07714175.1| membrane protein OxaA [Corynebacterium pseudogenitalium ATCC 33035] gi|311304530|gb|EFQ80604.1| membrane protein OxaA [Corynebacterium pseudogenitalium ATCC 33035] Length = 314 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 11/114 (9%) Query: 345 PMFMLMSYFYNLVGNFG-------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 P+ +M +++ L+ +F I+I+L + V+ + PL S I+P+ + Sbjct: 8 PVSGIMKFWHWLISSFVGESTAWLISIILLVITVRGVVVPLNWISVRSARIGALIRPENN 67 Query: 398 ELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++++ + ++Q L K++N NP AGC P L+ IP F +Y+V+ Sbjct: 68 RIKKQMNNATTTEEMAELMQEEKNLMKSYNYNPAAGCVPPLIMIPAFIGLYQVL 121 >gi|163931198|pdb|3BLC|A Chain A, Crystal Structure Of The Periplasmic Domain Of The Escherichia Coli Yidc gi|163931199|pdb|3BLC|B Chain B, Crystal Structure Of The Periplasmic Domain Of The Escherichia Coli Yidc Length = 330 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 7/105 (6%) Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N W+ +Y+A+ +IP + + + L +G A + + + + PG++ Sbjct: 221 NISSKGGWVAXLQQYFATAWIPHNDGTNNFYTANLGNGIAAI--GYKSQPVLVQPGQTGA 278 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + L+ G P I +A P ++ +D+GW +FI++P+ + Sbjct: 279 XNSTLWVG----PEIQDKXAAVA-PHLDLTVDYGWLWFISQPLLV 318 >gi|121718317|ref|XP_001276169.1| mitochondrial export translocase Oxa1, putative [Aspergillus clavatus NRRL 1] gi|119404367|gb|EAW14743.1| mitochondrial export translocase Oxa1, putative [Aspergillus clavatus NRRL 1] Length = 434 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 65/299 (21%), Positives = 119/299 (39%), Gaps = 66/299 (22%) Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW---- 338 AR+ + S +E T ++F A + T+ Y L +M +D+GW Sbjct: 3 ARFNSTSSVSEPVPEVSPESTLSDFSDLSAADLSTMPEYIGYLK----DMGLDYGWGPSS 58 Query: 339 ---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 F+ ++ + ++ ++VG ++L LF P ST + N++P Sbjct: 59 VIEFFIEHLHIWGGLPWWASIVGT---GLLLRAA----LFVPTLGAADTST-KITNLRPI 110 Query: 396 IDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447 + LR++ Q Q L+ M +++ H + P +LQIP F Y+V+ Sbjct: 111 TEPLRQQMMQLGGQGNHAEMYKLRAEMQRVHHQHGVKTWKTFIP-MLQIPFGFGCYRVVQ 169 Query: 448 --------SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 ++LE GW++DL ADP F L P++ SL Sbjct: 170 GMTAMPVPGLALES-----VGWLRDLTVADP--YFVL-----------------PVLSSL 205 Query: 500 SMFIQMKMSPPPAD---KGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M++ ++ +G A + L MP + ++ FP L +Y+ + + + Q Sbjct: 206 CMYLSLRKGGENGVNQLQGTAFGRLFLYGMPGISFLFMAFFPGALQLYFVATGLFGLGQ 264 >gi|225619323|ref|YP_002720549.1| inner membrane protein [Brachyspira hyodysenteriae WA1] gi|225214142|gb|ACN82876.1| inner membrane protein [Brachyspira hyodysenteriae WA1] Length = 926 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 43/208 (20%), Positives = 87/208 (41%), Gaps = 26/208 (12%) Query: 358 GNFGIAIMLTTVFVKLLFFPL---AKKQYVSTANMK-NIQPKIDELREKFKQSPPQVLQK 413 ++ ++++L ++ + +L PL A+K +M+ ++P I+ ++ +K +L + Sbjct: 31 SSYTVSVILVSLIINILSLPLYNIAEKWQQKERDMQVKMKPMINNIKAVYKGDQAYLLIR 90 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 ++ I G +L+QIP F A Y + SL + IK L AD Sbjct: 91 TCQRINGYKTIYAFRGVLGLLIQIPFFLAGYNFFT-SLTGAETESFFLIKSLGEADKI-- 147 Query: 474 FTLFGILPFYLPGFMHVG-----IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 +H+G + P IM+ + +++ + M + F+ Sbjct: 148 --------------IHIGNYYINLLPFIMTAFSLASTFIYSKKLTFKESIPIFLMSLFFL 193 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 L S PA L++YW+ + S + V+ Sbjct: 194 VFLYSSPAILLLYWTINCAFSFFKNIVL 221 >gi|315126468|ref|YP_004068471.1| hypothetical protein PSM_A1387 [Pseudoalteromonas sp. SM9913] gi|315014982|gb|ADT68320.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913] Length = 216 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 42/200 (21%), Positives = 90/200 (45%), Gaps = 28/200 (14%) Query: 349 LMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----IQPKIDELREKF 403 L+++F VG + +AI+L TV +L+ P+ V+ K ++P++D ++ + Sbjct: 14 LITFFTQEVGVSQAVAIILFTVIGRLVLMPINLVAMVNMVRNKKAIAALKPELDSIKSNY 73 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K P ++ + M LYK HNI + I + F + ++ + ++ F WI Sbjct: 74 KDQPSEIAKLTM-ALYKKHNIKFIDKKSVINMASQGVFGLGTFQALQQIVLNSKF-AWIT 131 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 +A D + I ++ +++ ++ M M P A++ ++ Sbjct: 132 SIAKPD--------------------IAISLLVGAIT-YLSMMMMPGSAEQTSTLLFLIP 170 Query: 524 PVVFVFALSSFPAGLIIYWS 543 ++ V L +FP+ + +YW+ Sbjct: 171 AIICVVTLVNFPSAIGLYWA 190 >gi|297564406|ref|YP_003683379.1| membrane protein insertase, YidC/Oxa1 family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848855|gb|ADH70873.1| membrane protein insertase, YidC/Oxa1 family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 236 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 + P++ ++ + + +P +++ + ++Y +PLAGC P L Q+PV A+Y V Sbjct: 65 RLAPQLAKITARHRGNPERLVAEQR-RVYAEAGTSPLAGCLPSLAQVPVMIALYGV 119 >gi|57089985|ref|XP_537362.1| PREDICTED: similar to Inner membrane protein OXA1L, mitochondrial precursor (Oxidase assembly 1-like protein) (OXA1-like protein) (OXA1Hs) (Hsa) isoform 1 [Canis familiaris] Length = 435 Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 57/227 (25%) Query: 359 NFGI----AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 N G+ AI TV + L FPL K A + N P+I + + +++ L Sbjct: 134 NLGLPWWGAIAACTVLARCLVFPLIVKGQREAAKIHNHLPEIQKFSTRIREA---KLAGD 190 Query: 415 MIQLYKT----------HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---- 460 + YK H++ L Q P+F + + + EM + P Sbjct: 191 QAEFYKASSEMTFYQKKHDVKLFRPLILPLTQAPIFISFFIALR---EMANLPVPSLQTG 247 Query: 461 ---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-Q 516 W +DL +DPT I P++++ +M+ +++ A+ G Q Sbjct: 248 GLLWFQDLTLSDPTYIL-------------------PLVVTATMWGVLELG---AETGMQ 285 Query: 517 AMILNWM-------PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + L WM P+ + FP + +YW SN+ S+ Q A + Sbjct: 286 SSDLQWMRNLIRVMPLAVLPITIHFPTAVFMYWLSSNMFSLGQVACL 332 >gi|207345808|gb|EDZ72510.1| YER154Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 275 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 15/118 (12%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLY 419 I TT+ ++ L FPL K + A +I+P++D L K + Q++ +L Sbjct: 132 IAATTILIRCLMFPLYVKSSDTVARNSHIKPELDALNNKLMSTTDLQQGQLVAMQRKKLL 191 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAADP 470 +H I P +LQIP+ + + M + P G W DL ADP Sbjct: 192 SSHGIKNRWLAAP-MLQIPIALGFFNALR---HMANYPVDGFANQGVAWFTDLTQADP 245 >gi|148989975|ref|ZP_01821250.1| SpoIIIJ family protein [Streptococcus pneumoniae SP6-BS73] gi|149003634|ref|ZP_01828499.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69] gi|237650993|ref|ZP_04525245.1| OxaA-like protein precursor [Streptococcus pneumoniae CCRI 1974] gi|237822551|ref|ZP_04598396.1| OxaA-like protein precursor [Streptococcus pneumoniae CCRI 1974M2] gi|147758366|gb|EDK65366.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69] gi|147924635|gb|EDK75721.1| SpoIIIJ family protein [Streptococcus pneumoniae SP6-BS73] Length = 308 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 22/168 (13%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 ++P L+E Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 100 LEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIYFAAQH 159 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + A + G +P P + V ++ L + + Sbjct: 160 TEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLSLHGVE 200 Query: 510 PPADKGQAMILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIVQQAVI 556 + Q + +M + + S F PA + +YW + I+QQ ++ Sbjct: 201 DEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIV 248 >gi|255719834|ref|XP_002556197.1| KLTH0H07304p [Lachancea thermotolerans] gi|238942163|emb|CAR30335.1| KLTH0H07304p [Lachancea thermotolerans] Length = 383 Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 28/203 (13%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV-LQKAMIQLYKTH 422 I+ TTV V+LL FPL K + A I+P++D + + + V Q+ ++ K Sbjct: 119 IVTTTVIVRLLMFPLYVKSSDTIARNSKIKPELDAINSELMGTTDMVEAQRVALRRKKLM 178 Query: 423 NINPLAGCW--PILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAADPTNI 473 N + + +LQ+PV + I +M + P G W +DL+ ADP Sbjct: 179 AENGIKNRYLAAPMLQVPVALGFFSGIR---QMANYPVDGFTNQGLAWFQDLSLADP--Y 233 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 L I F +G S PA K MP++ + A + Sbjct: 234 LGLQVITASVFISFTRLGGETGAQQFS----------PAMKN---FFTVMPLLSIPATMN 280 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 +G+++Y++ + S++Q V+ Sbjct: 281 LASGVVLYFAVNGACSVLQTLVL 303 >gi|294155969|ref|YP_003560353.1| 60 kDa inner membrane protein [Mycoplasma crocodyli MP145] gi|291600137|gb|ADE19633.1| 60 kDa inner membrane protein [Mycoplasma crocodyli MP145] Length = 630 Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust. Identities = 40/195 (20%), Positives = 87/195 (44%), Gaps = 38/195 (19%) Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-----LYKTHNINPLAGCWPILL 435 K V + ++++ K ++ K+K + KA Q LYK +NINPL +++ Sbjct: 428 KSIVGQSIQEDLRGKKAQIEAKYKDFGNNKMMKARKQQELQKLYKKNNINPLDQFLSVIV 487 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 +P+FFA+++VI E++ + G + ++ +++F + ++GI I Sbjct: 488 SMPIFFAMWRVIQCMPEIKSTIWLGL--NFSSTSYSSLFA---------GQWQYLGIIVI 536 Query: 496 IMSLSMFIQMKM------------------SPPPADKGQAMILNWMPVVFVFALSSFPAG 537 + + + Q+ + ++K Q +++ +VF+ F AG Sbjct: 537 AVGVQLVSQILPRLLNRRRLKERISIAENEALKKSEKTQRIVM----IVFLVITLMFTAG 592 Query: 538 LIIYWSWSNVISIVQ 552 + +YW + + +I Q Sbjct: 593 VQVYWIITGLWTIGQ 607 >gi|15903832|ref|NP_359382.1| OxaA-like protein precursor [Streptococcus pneumoniae R6] gi|116517062|ref|YP_817195.1| OxaA-like protein precursor [Streptococcus pneumoniae D39] gi|38503005|sp|Q8DNE1|OXAA2_STRR6 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|15459474|gb|AAL00593.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116077638|gb|ABJ55358.1| SpoIIIJ family protein [Streptococcus pneumoniae D39] Length = 308 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 22/168 (13%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 ++P L+E Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 100 LEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIYFAAQH 159 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + A + G +P P + V ++ L + + Sbjct: 160 TEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLSLHGVE 200 Query: 510 PPADKGQAMILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIVQQAVI 556 + Q + +M + + S F PA + +YW + I+QQ ++ Sbjct: 201 DEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIV 248 >gi|320527122|ref|ZP_08028309.1| membrane protein insertase, YidC/Oxa1 family [Solobacterium moorei F0204] gi|320132450|gb|EFW24993.1| membrane protein insertase, YidC/Oxa1 family [Solobacterium moorei F0204] Length = 302 Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust. Identities = 45/216 (20%), Positives = 94/216 (43%), Gaps = 24/216 (11%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ--- 417 G AI + TV V L K + M+ +QP++++++ K++ Q + M Q Sbjct: 77 GGAIAIVTVVVNGLLAVFTLKSQMGMQRMQMLQPELNKIQRKYEGRDDQASKMRMAQEQQ 136 Query: 418 -LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 L + +N+NP + +Q+P+ A++ I + + + F G + P+ F L Sbjct: 137 QLMRKYNVNPGSMMLVQFVQLPIIMAMFMAIQRAEAVVNGTFLGMNLQV---KPSEAFGL 193 Query: 477 F-----GILPFYLPGFMHVGIWPIIMSLSMFIQMKM----------SPPPADKGQAMILN 521 LP+ + + +++ L ++ Q K P P + M+ Sbjct: 194 LFKGDLSGLPYIILFLLMAVTQVVLVLLPIYFQKKKAAAEAAKHHRKPEPTNNQNIMMQM 253 Query: 522 WMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +M V V F L + +G+ ++W N++ I++ ++ Sbjct: 254 YMIVMVLAFGLM-WQSGMSLFWFIRNIVDIIKTIIV 288 >gi|115433064|ref|XP_001216669.1| predicted protein [Aspergillus terreus NIH2624] gi|114189521|gb|EAU31221.1| predicted protein [Aspergillus terreus NIH2624] Length = 504 Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 45/211 (21%) Query: 363 AIMLTTVFVKL-LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---- 417 +I+ + V+L L P+ ST + N++ LR K + + Q M+Q Sbjct: 150 SIVGAGLLVRLALLKPMLGAADTST-KINNLRDVSTPLRTKMTTAAREGKQTEMMQARME 208 Query: 418 ---LYKTHNINPLAGCWPILLQIPVFFAIYKVI---------SISLEMRHAPFWGWIKDL 465 L+ H + P P LLQ+P+ F Y+V+ ++LE GWIKDL Sbjct: 209 LNNLHAQHGVKPWKSFVP-LLQVPLGFGCYRVVKGMTALPVPGLALES-----VGWIKDL 262 Query: 466 AAADPTNIFTLFGILPFYLPGFMHV----GIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 ADP + +LP FM++ G I +L+ K M L Sbjct: 263 TVADP------YFVLPATTALFMYLSFRKGGESGINNLTNSSLGK-----------MFLY 305 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 MP + +S FP+ L +Y+ + ++ Q Sbjct: 306 GMPAMTFAFMSFFPSALQLYFVATGAFALGQ 336 >gi|148998505|ref|ZP_01825946.1| OxaA-like protein precursor [Streptococcus pneumoniae SP11-BS70] gi|149021925|ref|ZP_01835912.1| OxaA-like protein precursor [Streptococcus pneumoniae SP23-BS72] gi|168487113|ref|ZP_02711621.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1087-00] gi|168576625|ref|ZP_02722491.1| membrane protein OxaA 2 [Streptococcus pneumoniae MLV-016] gi|225855465|ref|YP_002736977.1| OxaA-like protein precursor [Streptococcus pneumoniae JJA] gi|225857549|ref|YP_002739060.1| OxaA-like protein precursor [Streptococcus pneumoniae P1031] gi|307068584|ref|YP_003877550.1| preprotein translocase subunit YidC [Streptococcus pneumoniae AP200] gi|147755698|gb|EDK62744.1| OxaA-like protein precursor [Streptococcus pneumoniae SP11-BS70] gi|147929963|gb|EDK80951.1| OxaA-like protein precursor [Streptococcus pneumoniae SP23-BS72] gi|183569986|gb|EDT90514.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1087-00] gi|183577623|gb|EDT98151.1| membrane protein OxaA 2 [Streptococcus pneumoniae MLV-016] gi|225723420|gb|ACO19273.1| membrane protein OxaA 2 [Streptococcus pneumoniae JJA] gi|225724602|gb|ACO20454.1| membrane protein OxaA 2 [Streptococcus pneumoniae P1031] gi|301794918|emb|CBW37379.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae INV104] gi|306410121|gb|ADM85548.1| Preprotein translocase subunit YidC [Streptococcus pneumoniae AP200] gi|332072161|gb|EGI82647.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA41301] gi|332199290|gb|EGJ13368.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA41317] gi|332199987|gb|EGJ14061.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA47901] Length = 308 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 22/168 (13%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 ++P L+E Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 100 LEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIYFAAQH 159 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + A + G +P P + V ++ L + + Sbjct: 160 TEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLSLHGVE 200 Query: 510 PPADKGQAMILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIVQQAVI 556 + Q + +M + + S F PA + +YW + I+QQ ++ Sbjct: 201 DEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIV 248 >gi|240047829|ref|YP_002961217.1| putative inner membrane protein translocase component YidC [Mycoplasma conjunctivae HRC/581] gi|239985401|emb|CAT05414.1| Membrane protein oxaA [Mycoplasma conjunctivae] Length = 607 Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 15/181 (8%) Query: 393 QPKIDELREKFKQSP--PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + KID E ++++ Q ++ + +LYK +N +P A +L+ P+F A+++V+ Sbjct: 416 KAKIDAKYEAYQKNKVMQQRQRQEIAELYKKNNFSPFAPFSQVLVTTPIFIAVWRVLQGI 475 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL-SMFIQMK--- 506 ++ F G +L+A T+ LF YLP + V + + L ++ K Sbjct: 476 PSLKVTFFLGL--ELSA---TSYQQLFAGQWIYLPILILVVVTQALQQLVPKWLNKKKTN 530 Query: 507 ----MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 S A K Q + +VF+F F A L IYW + + Q I + + Sbjct: 531 RIINASESEAMKKQLKTQRIITIVFIFFGVVFQASLQIYWIIGGIWEVAQSLGIFYLQKS 590 Query: 563 E 563 + Sbjct: 591 K 591 >gi|6321002|ref|NP_011081.1| Oxa1p [Saccharomyces cerevisiae S288c] gi|730247|sp|P39952|OXA1_YEAST RecName: Full=Mitochondrial inner membrane protein OXA1; AltName: Full=Cytochrome oxidase biogenesis protein OXA1; AltName: Full=Oxidase assembly protein 1; Flags: Precursor gi|521092|emb|CAA52465.1| PET 1402 [Saccharomyces cerevisiae] gi|603394|gb|AAB64681.1| Oxa1p [Saccharomyces cerevisiae] gi|832918|emb|CAA54675.1| OXA1 [Saccharomyces cerevisiae] gi|51013715|gb|AAT93151.1| YER154W [Saccharomyces cerevisiae] gi|151944872|gb|EDN63131.1| cytochrome oxidase activity [Saccharomyces cerevisiae YJM789] gi|190405713|gb|EDV08980.1| inner membrane protein OXA1, mitochondrial precursor [Saccharomyces cerevisiae RM11-1a] gi|256272066|gb|EEU07078.1| Oxa1p [Saccharomyces cerevisiae JAY291] gi|259146083|emb|CAY79343.1| Oxa1p [Saccharomyces cerevisiae EC1118] gi|285811787|tpg|DAA07815.1| TPA: Oxa1p [Saccharomyces cerevisiae S288c] gi|323309318|gb|EGA62536.1| Oxa1p [Saccharomyces cerevisiae FostersO] gi|323333812|gb|EGA75203.1| Oxa1p [Saccharomyces cerevisiae AWRI796] gi|323355337|gb|EGA87162.1| Oxa1p [Saccharomyces cerevisiae VL3] Length = 402 Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 15/118 (12%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLY 419 I TT+ ++ L FPL K + A +I+P++D L K + Q++ +L Sbjct: 132 IAATTILIRCLMFPLYVKSSDTVARNSHIKPELDALNNKLMSTTDLQQGQLVAMQRKKLL 191 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAADP 470 +H I P +LQIP+ + + M + P G W DL ADP Sbjct: 192 SSHGIKNRWLAAP-MLQIPIALGFFNALR---HMANYPVDGFANQGVAWFTDLTQADP 245 >gi|323337853|gb|EGA79093.1| Oxa1p [Saccharomyces cerevisiae Vin13] Length = 354 Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 15/118 (12%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLY 419 I TT+ ++ L FPL K + A +I+P++D L K + Q++ +L Sbjct: 132 IAATTILIRCLMFPLYVKSSDTVARNSHIKPELDALNNKLMSTTDLQQGQLVAMQRKKLL 191 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-------WIKDLAAADP 470 +H I P +LQIP+ + + M + P G W DL ADP Sbjct: 192 SSHGIKNRWLAAP-MLQIPIALGFFNALR---HMANYPVDGFANQGVAWFTDLTQADP 245 >gi|15901798|ref|NP_346402.1| OxaA-like protein precursor [Streptococcus pneumoniae TIGR4] gi|111658862|ref|ZP_01409483.1| hypothetical protein SpneT_02000033 [Streptococcus pneumoniae TIGR4] gi|148993164|ref|ZP_01822730.1| OxaA-like protein precursor [Streptococcus pneumoniae SP9-BS68] gi|149007450|ref|ZP_01831093.1| OxaA-like protein precursor [Streptococcus pneumoniae SP18-BS74] gi|168489980|ref|ZP_02714179.1| membrane protein OxaA 2 [Streptococcus pneumoniae SP195] gi|182684910|ref|YP_001836657.1| oxaA-like protein precursor [Streptococcus pneumoniae CGSP14] gi|225859731|ref|YP_002741241.1| OxaA-like protein precursor [Streptococcus pneumoniae 70585] gi|225861793|ref|YP_002743302.1| OxaA-like protein precursor [Streptococcus pneumoniae Taiwan19F-14] gi|303254101|ref|ZP_07340216.1| OxaA-like protein precursor [Streptococcus pneumoniae BS455] gi|303260348|ref|ZP_07346318.1| oxaA-like protein precursor [Streptococcus pneumoniae SP-BS293] gi|303262496|ref|ZP_07348438.1| oxaA-like protein precursor [Streptococcus pneumoniae SP14-BS292] gi|303265127|ref|ZP_07351040.1| oxaA-like protein precursor [Streptococcus pneumoniae BS397] gi|303266011|ref|ZP_07351906.1| oxaA-like protein precursor [Streptococcus pneumoniae BS457] gi|303268057|ref|ZP_07353858.1| oxaA-like protein precursor [Streptococcus pneumoniae BS458] gi|307128174|ref|YP_003880205.1| membrane protein OxaA 2 [Streptococcus pneumoniae 670-6B] gi|38503145|sp|Q97NP5|OXAA2_STRPN RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|254778167|sp|C1CTN0|OXAA_STRZT RecName: Full=Membrane protein oxaA; Flags: Precursor gi|14973482|gb|AAK76042.1| SpoIIIJ family protein [Streptococcus pneumoniae TIGR4] gi|147761022|gb|EDK67991.1| OxaA-like protein precursor [Streptococcus pneumoniae SP18-BS74] gi|147928138|gb|EDK79156.1| OxaA-like protein precursor [Streptococcus pneumoniae SP9-BS68] gi|182630244|gb|ACB91192.1| oxaA-like protein precursor [Streptococcus pneumoniae CGSP14] gi|183571634|gb|EDT92162.1| membrane protein OxaA 2 [Streptococcus pneumoniae SP195] gi|225721166|gb|ACO17020.1| membrane protein OxaA 2 [Streptococcus pneumoniae 70585] gi|225727287|gb|ACO23138.1| membrane protein OxaA 2 [Streptococcus pneumoniae Taiwan19F-14] gi|301802653|emb|CBW35419.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae INV200] gi|302598934|gb|EFL65965.1| OxaA-like protein precursor [Streptococcus pneumoniae BS455] gi|302636396|gb|EFL66889.1| oxaA-like protein precursor [Streptococcus pneumoniae SP14-BS292] gi|302638514|gb|EFL68979.1| oxaA-like protein precursor [Streptococcus pneumoniae SP-BS293] gi|302642417|gb|EFL72763.1| oxaA-like protein precursor [Streptococcus pneumoniae BS458] gi|302644452|gb|EFL74704.1| oxaA-like protein precursor [Streptococcus pneumoniae BS457] gi|302645344|gb|EFL75578.1| oxaA-like protein precursor [Streptococcus pneumoniae BS397] gi|306485236|gb|ADM92105.1| membrane protein OxaA 2 [Streptococcus pneumoniae 670-6B] gi|327389140|gb|EGE87486.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA04375] gi|332071953|gb|EGI82441.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA17545] gi|332072057|gb|EGI82544.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA17570] Length = 308 Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 22/168 (13%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 ++P L+E Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 100 LEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIYFAAQH 159 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + A + G +P P + V ++ L + + Sbjct: 160 TEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLSLHGVE 200 Query: 510 PPADKGQAMILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIVQQAVI 556 + Q + +M + + S F PA + +YW + I+QQ ++ Sbjct: 201 DEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIV 248 >gi|148985555|ref|ZP_01818744.1| OxaA-like protein precursor [Streptococcus pneumoniae SP3-BS71] gi|168492050|ref|ZP_02716193.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC0288-04] gi|147922275|gb|EDK73396.1| OxaA-like protein precursor [Streptococcus pneumoniae SP3-BS71] gi|183573673|gb|EDT94201.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC0288-04] gi|301800737|emb|CBW33385.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae OXC141] Length = 308 Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 22/168 (13%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 ++P L+E Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 100 LEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIYFAAQH 159 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + A + G +P P + V ++ L + + Sbjct: 160 TEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLSLHGVE 200 Query: 510 PPADKGQAMILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIVQQAVI 556 + Q + +M + + S F PA + +YW + I+QQ ++ Sbjct: 201 DEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIV 248 >gi|19075829|ref|NP_588329.1| mitochondrial inner membrane protein Cox18 [Schizosaccharomyces pombe 972h-] gi|38372431|sp|O94587|COX18_SCHPO RecName: Full=Mitochondrial inner membrane protein cox18; AltName: Full=Sp3; AltName: Full=cox18sp+; Flags: Precursor gi|3790260|emb|CAA21449.1| mitochondrial inner membrane protein Cox18 [Schizosaccharomyces pombe] Length = 202 Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust. Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 31/193 (16%) Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPIL 434 P+A + +QP I E +++ + + + ++K +LYK N +PL + Sbjct: 31 LPIAIASLKTARRFVQVQPLIKEAKKRCRTNTDFRTVRK---KLYKRFNCHPLMIYALPI 87 Query: 435 LQIPVF-FAIYKV---ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 Q+P+F FA Y++ + + E W DL DP H Sbjct: 88 TQLPLFAFASYQLRQAVDVCPESMSTEGMLWFTDLTLPDP------------------H- 128 Query: 491 GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS----SFPAGLIIYWSWSN 546 G+ P +++++ M + P+D I N ++ F +S L +YW+ S Sbjct: 129 GVLPAVLAVTYLTNMSILKRPSDSRLLKIFNTAGIMSAFFVSFMAFKTSTALSLYWTTSA 188 Query: 547 VISIVQQAVIMKM 559 + S+VQ + K+ Sbjct: 189 IYSLVQNVALRKL 201 >gi|149012436|ref|ZP_01833467.1| OxaA-like protein precursor [Streptococcus pneumoniae SP19-BS75] gi|168494784|ref|ZP_02718927.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC3059-06] gi|221232700|ref|YP_002511854.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae ATCC 700669] gi|298230172|ref|ZP_06963853.1| OxaA-like protein precursor [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254778|ref|ZP_06978364.1| OxaA-like protein precursor [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503746|ref|YP_003725686.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus pneumoniae TCH8431/19A] gi|147763492|gb|EDK70428.1| OxaA-like protein precursor [Streptococcus pneumoniae SP19-BS75] gi|183575319|gb|EDT95847.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC3059-06] gi|220675162|emb|CAR69746.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae ATCC 700669] gi|298239341|gb|ADI70472.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus pneumoniae TCH8431/19A] Length = 308 Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 22/168 (13%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 ++P L+E Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 100 LEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIYFAAQH 159 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + A + G +P P + V ++ L + + Sbjct: 160 TEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLSLHGVE 200 Query: 510 PPADKGQAMILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIVQQAVI 556 + Q + +M + + S F PA + +YW + I+QQ ++ Sbjct: 201 DEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIV 248 >gi|145512888|ref|XP_001442355.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409708|emb|CAK74958.1| unnamed protein product [Paramecium tetraurelia] Length = 363 Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 37/234 (15%) Query: 349 LMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR------- 400 L+ Y N L G I+ ++ +K+ F PL ++ MK I+P+ + Sbjct: 63 LLLYLANDLSWGMGWGILAISMGIKIAFTPLMFSAQLNACRMKLIEPESKNFQNMIQRAM 122 Query: 401 --EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV----FFAIYKVISISLEMR 454 + FK S + QK + HNIN L I LQ+P F ++ V S+ + Sbjct: 123 RAQDFKAS--RAAQKQFKLFKRKHNINMLIPGLSI-LQMPFLFTWFLSLRYVCSLPDKYE 179 Query: 455 HAPFWG--WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 G W +DL+ DP +GILP F W I SL+ +Q + + P A Sbjct: 180 DLKSQGFLWFQDLSEYDP------YGILPIMSSVFT---FWNI--SLNPNMQSQSTVPFA 228 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN-----VISIVQQAVIMKMHG 561 + + ++P + + FPAG+ +YW S + ++ +Q I K+ G Sbjct: 229 KYYR--YVRFLPFFSIPVVIFFPAGVNLYWCSSAFCHLIITALARQEKIRKIFG 280 >gi|13508419|ref|NP_110369.1| putative inner membrane protein translocase component YidC [Mycoplasma pneumoniae M129] gi|2496458|sp|P75112|OXAA_MYCPN RecName: Full=Membrane protein oxaA gi|1673823|gb|AAB95810.1| conserved hypothetical protein [Mycoplasma pneumoniae M129] gi|301633303|gb|ADK86857.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma pneumoniae FH] Length = 385 Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust. Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 11/126 (8%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS----PPQVLQKA 414 N +++++ V+L+ + ++ M +Q K+ E+ K+K + + Q Sbjct: 149 NMILSLIVLLFLVRLITIVITLNSTLALEKMNEVQGKLAEINAKYKGALDLQSKRNRQME 208 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA---PFWGWIKDLAAADPT 471 ++ LYK HNI A + + +P+F IY++++ ++ FW DL+ T Sbjct: 209 IMSLYKKHNIKSSASFVQVFVTLPIFLIIYRIVTTLRPIKAIILFNFW----DLSKVPLT 264 Query: 472 NIFTLF 477 IF+ F Sbjct: 265 EIFSNF 270 >gi|322377609|ref|ZP_08052099.1| SpoIIIJ family protein [Streptococcus sp. M334] gi|321281374|gb|EFX58384.1| SpoIIIJ family protein [Streptococcus sp. M334] Length = 308 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++P L+E Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 100 LEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIY 154 >gi|241890041|ref|ZP_04777339.1| stage III sporulation protein J [Gemella haemolysans ATCC 10379] gi|241863663|gb|EER68047.1| stage III sporulation protein J [Gemella haemolysans ATCC 10379] Length = 297 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 25/137 (18%) Query: 337 GWFYFI-AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL-----------AKKQYV 384 G FY I KPM + +S + G++G +I++ T+ ++LL P K Q + Sbjct: 29 GTFYDIFVKPMDLSLSKIHEYTGSWGWSIVIITLVIRLLVLPFMLNNYKVQNKSRKGQEL 88 Query: 385 STANMKNIQPKIDELREKFKQ-----------SPPQVLQKAMIQLYKTHNINPLA--GCW 431 + ++ +Q K +EK + S LQ+ + + K ++ PL+ GC Sbjct: 89 ARPELEVLQKKQQAAKEKEARAISNEEKMQARSELMELQREQMAILKKYDAMPLSLGGCL 148 Query: 432 PILLQIPVFFAIYKVIS 448 P+L+ +P ++ +S Sbjct: 149 PMLIPLPFLTGLFYTLS 165 >gi|307705543|ref|ZP_07642395.1| membrane protein oxaA 1 [Streptococcus mitis SK597] gi|307620820|gb|EFN99904.1| membrane protein oxaA 1 [Streptococcus mitis SK597] Length = 308 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++P L+E Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 100 LEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIY 154 >gi|307709736|ref|ZP_07646187.1| membrane protein oxaA 1 [Streptococcus mitis SK564] gi|307619438|gb|EFN98563.1| membrane protein oxaA 1 [Streptococcus mitis SK564] Length = 308 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 ++P L+E Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 100 LEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIYFAAQY 159 Query: 450 SLEMRHAPFWG 460 + + A + G Sbjct: 160 TEGVAQASYLG 170 >gi|213965316|ref|ZP_03393512.1| putative inner membrane protein translocase component YidC [Corynebacterium amycolatum SK46] gi|213951932|gb|EEB63318.1| putative inner membrane protein translocase component YidC [Corynebacterium amycolatum SK46] Length = 452 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 56/275 (20%), Positives = 108/275 (39%), Gaps = 43/275 (15%) Query: 341 FIAKPMFMLMSYFYNLVGNFG--IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ K +L++ ++L + +++ L V+ LA +Q++S N++P++ Sbjct: 13 FVLKAWHLLLASVFHLPSSLSWTLSLFLLVFTVRGALAFLAFQQFISARKTANLRPQLFM 72 Query: 399 LREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L+E++++S PQ A ++ K I P+ +QIPV + +++ L Sbjct: 73 LKERYRRSIEPNSPQYANFASKEMRKAEGIKTSVMLAPLFVQIPVIMGLVRMLRHMLRAS 132 Query: 455 HAPFW------GWIKDLAAADPTNIFTLFGILPFYLP-----------------GFMHVG 491 P G+I +D + L LP YL F +G Sbjct: 133 EGPGLPASHNVGFISKDEISDFLSATFLGQPLPAYLRMDPEQLQIFGGNHDSLLTFCIIG 192 Query: 492 I--WPIIMSLSMFIQMKMSPPPAD----------KGQAMILNWMPVVFVFA--LSSFPAG 537 I I ++ I + D K ++L + P++ +FA P Sbjct: 193 IVAAAIFTGFNLVISYRRLQRTLDYSNSVSVFLSKFMRVMLIYAPLMILFAGFFGPTPVA 252 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 LI+YW +N ++ Q ++ + L D R+ Sbjct: 253 LIVYWVTNNFWTLTQNIILTRYVEKTYPLTDDFRT 287 >gi|38234809|ref|NP_940576.1| putative inner membrane protein translocase component YidC [Corynebacterium diphtheriae NCTC 13129] gi|38201073|emb|CAE50797.1| Putative integral membrane protein [Corynebacterium diphtheriae] Length = 435 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%) Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ--VLQKAMIQ--LYKTHNI 424 V V+ + P + Q+ S ++PKI L+E++ + + +L++ Q + + + Sbjct: 41 VTVRSIIAPFSWMQFKSGRFAIMMRPKIKRLKEEYAERTDKESILEQERRQKEIQEEYGY 100 Query: 425 NPLAGCWPILLQIPVFFAIYKVI 447 + AGC P L+Q+PVF +Y+V+ Sbjct: 101 SMAAGCVPALIQVPVFLGLYQVL 123 >gi|145534225|ref|XP_001452857.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124420556|emb|CAK85460.1| unnamed protein product [Paramecium tetraurelia] Length = 358 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 37/234 (15%) Query: 349 LMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR------- 400 L+ Y N L G I+ ++ +K+ F PL ++ MK I+P+ + Sbjct: 63 LLLYLANDLSWGMGWGILAISMGIKIAFTPLMFSAQLNACRMKLIEPESKNFQNMIQRAM 122 Query: 401 --EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV----FFAIYKVISISLEMR 454 + FK S + QK + HNIN L I LQ+P F ++ V S+ + Sbjct: 123 RAQDFKAS--RAAQKQFKLFKRKHNINMLIPGLSI-LQMPFLFTWFLSLRYVCSLPDKYE 179 Query: 455 HAPFWG--WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 G W +DL+ DP +GILP F W I SL+ +Q + + P A Sbjct: 180 GLKSQGFLWFQDLSEYDP------YGILPIMSSIFT---FWNI--SLNPNMQSQSTVPFA 228 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN-----VISIVQQAVIMKMHG 561 + + ++P + + FPAG+ +YW S + ++ +Q I K+ G Sbjct: 229 KYYR--YVRFLPFFSIPVVIFFPAGVNLYWCSSALCHLIITALARQEQIRKIFG 280 >gi|110755911|ref|XP_001120913.1| PREDICTED: mitochondrial inner membrane protein COX18-like [Apis mellifera] Length = 347 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 57/257 (22%) Query: 363 AIMLTTVFVKLLF-FPLAKKQYVSTANMKNIQPKIDELREKFKQ-----------SPPQV 410 +IMLT++ + + PL + A +N++ ++ E+ EK ++ SP + Sbjct: 93 SIMLTSIIARTIINLPLNILDVHTKAKQENLKFELREIAEKIQKKVQRQALSLELSPYRA 152 Query: 411 -------LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF----- 458 K QLY +N +P ILLQ P++ IS S+ +R+ + Sbjct: 153 HYLFTRDFNKEQKQLYIKNNCHPFKSVAIILLQAPIW------ISFSVAVRNICYMLPQV 206 Query: 459 ---------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 +GWIK+L D + ILP L G ++ I I L Sbjct: 207 NTATLQDFKELTTGGFGWIKNLIDIDH------YFILP-SLFGLSNLAILEINQVLFHVK 259 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K S + + +I+ ++P+ ++ P+ L ++W +N +IV +++ Sbjct: 260 DSKFSRIYKNFCRVLIIGFVPL-----MACLPSCLSLFWVTNNCCAIVYNLLLLSPKVRR 314 Query: 564 IGLIDRLRSTFSKNYNS 580 +G I + S + Y Sbjct: 315 LGKIPKTDSELRRPYTE 331 >gi|254518208|ref|ZP_05130264.1| inner membrane insertion protein [Clostridium sp. 7_2_43FAA] gi|226911957|gb|EEH97158.1| inner membrane insertion protein [Clostridium sp. 7_2_43FAA] Length = 212 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 2/100 (2%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ + + + G++GIAI+L T+ VKLL P + KQ ++ +I+ +++K+K + Sbjct: 11 MIEFAFQITGDWGIAIVLLTITVKLLMLPFSIKQRIAMKKQIVFSKEIEAVKKKYKNNKK 70 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 + Q + +N + GC+ LLQ+P+ +Y IS Sbjct: 71 R--QDDELNKLYLNNSKGMFGCFLSLLQLPIISGLYMSIS 108 >gi|168484274|ref|ZP_02709226.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1873-00] gi|169833583|ref|YP_001695329.1| OxaA-like protein precursor [Streptococcus pneumoniae Hungary19A-6] gi|194397013|ref|YP_002038558.1| OxaA-like protein precursor [Streptococcus pneumoniae G54] gi|168996085|gb|ACA36697.1| membrane protein OxaA 2 [Streptococcus pneumoniae Hungary19A-6] gi|172042503|gb|EDT50549.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1873-00] gi|194356680|gb|ACF55128.1| SpoIIIJ family protein [Streptococcus pneumoniae G54] gi|332199401|gb|EGJ13478.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA47368] Length = 308 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 22/168 (13%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISI 449 ++P L+E Q Q+A+ K H I+ G C+P+LLQ+P F AIY Sbjct: 100 LEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPLLLQMPFFSAIYFAAQH 159 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + A + G +P P + V ++ L + + Sbjct: 160 TEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLSLHGVE 200 Query: 510 PPADKGQAMILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIVQQAVI 556 + Q + +M + + S F PA + +YW + I+QQ ++ Sbjct: 201 DEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIV 248 >gi|78369430|ref|NP_001030412.1| mitochondrial inner membrane protein OXA1L precursor [Bos taurus] gi|122064647|sp|Q3SYV3|OXA1L_BOVIN RecName: Full=Mitochondrial inner membrane protein OXA1L; AltName: Full=Oxidase assembly 1-like protein; Short=OXA1-like protein; Flags: Precursor gi|74268195|gb|AAI03368.1| Oxidase (cytochrome c) assembly 1-like [Bos taurus] gi|296483636|gb|DAA25751.1| mitochondrial inner membrane protein OXA1L precursor [Bos taurus] Length = 441 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 51/228 (22%), Positives = 88/228 (38%), Gaps = 59/228 (25%) Query: 359 NFGI----AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 N G+ AI TV + L FPL K A + N P+I + + +++ L Sbjct: 135 NLGLPWWGAIAACTVLARCLVFPLIVKGQREAAKIHNHLPEIQKFSARIREAK---LTGN 191 Query: 415 MIQLY----------KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP------- 457 + Y K H+I L Q P+F + + + EM + P Sbjct: 192 HTEFYRASSEMTFYQKKHDIKLFRPLILPLTQAPIFISFFIALR---EMANLPVPSLQTG 248 Query: 458 -FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG- 515 W W +DL +DP + P++++ +M+ +++ A+ G Sbjct: 249 GLW-WFQDLTLSDPIYVL-------------------PLVVTATMWGVLELG---AETGM 285 Query: 516 QAMILNW-------MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q+ L W MP+ + FP + +YW SN+ S+ Q A + Sbjct: 286 QSSDLQWMRNFIRLMPLAVLPITIHFPTAVFMYWLSSNMFSLGQVACL 333 >gi|332222935|ref|XP_003260624.1| PREDICTED: mitochondrial inner membrane protein OXA1L [Nomascus leucogenys] Length = 436 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 61/223 (27%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT- 421 AI TVF + L FPL A + N P+I + + +++ L + YK Sbjct: 143 AIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREAK---LAGDHTEYYKAS 199 Query: 422 ---------HNINPLAGCWPILL---QIPVFFAIYKVISISLEMRHAP--------FWGW 461 H I P++L Q P+F + + + EM + P W W Sbjct: 200 SEMAFYQKKHGIKLFK---PLILPVTQAPIFISFFIALR---EMANLPVPSLQTGGLW-W 252 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMIL 520 +DL +DP I P+ ++ +M+ +++ A+ G Q+ L Sbjct: 253 FQDLTVSDPIYIL-------------------PLAVTATMWAVLELG---AETGVQSSDL 290 Query: 521 NWM-------PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 WM P++ + FP + +YW SN+ S+ Q + + Sbjct: 291 QWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLAQVSCL 333 >gi|289549934|ref|YP_003470838.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] gi|315659439|ref|ZP_07912302.1| lipoprotein [Staphylococcus lugdunensis M23590] gi|289179466|gb|ADC86711.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] gi|315495558|gb|EFU83890.1| lipoprotein [Staphylococcus lugdunensis M23590] Length = 273 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 41/233 (17%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----IQ 393 +FY KP+ L+ L ++GIAI+L + ++ + PL Q ++ +Q Sbjct: 31 FFYVFVKPIDWLLHSIGQLFHSYGIAIILIVIIIRSILLPLMLNQMKQMHTLREKRAIVQ 90 Query: 394 PKIDELREKFKQ-SPPQVLQKA---MIQLYKTHNINP---LAGCWPILLQIPVFFAIYKV 446 +I +++ + +Q S P++ ++A ++ YK + I+P + G PI +QIP+ + Sbjct: 91 DEISDIQTQMRQASTPEIRKEANQLLLAKYKEYGISPFKSILGSLPIFIQIPIILGLLAC 150 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-PIIMSLSMFIQM 505 I +H D A P F F + MH IW ++ L FIQ Sbjct: 151 I------KHP-----TSDALAQHPH--FLWFNL--------MHPDIWLALLAGLLYFIQP 189 Query: 506 KMSPPPADKGQ------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ KGQ M+L+ P+ ++A A + +YW S IVQ Sbjct: 190 LVNAIHYPKGQRKTYYTMMVLS--PLFIIYASLHSAAAISLYWVVSASFLIVQ 240 >gi|218191963|gb|EEC74390.1| hypothetical protein OsI_09733 [Oryza sativa Indica Group] Length = 446 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 56/247 (22%), Positives = 99/247 (40%), Gaps = 51/247 (20%) Query: 349 LMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTA--NMKN----IQPKID---- 397 L+ ++L G N+ I LT++ ++ L PL Q +T N+K ++P+I+ Sbjct: 145 LIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQMKATVKLNVKTDSPAMRPEIEAINL 204 Query: 398 ELR-------------------EKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILL 435 E+R E + PQ + ++ + +L+ H + PL + + Sbjct: 205 EMRTISSTRVAGNEKSSTRVTDEGSMSTDPQSMLEGKRKLGELFLRHGVTPLTPLKGLFI 264 Query: 436 QIPVFFAIYKVISISLEMRHAPFWG----WIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 Q P+F + + IS +E + F G W DL D I + L F Sbjct: 265 QAPIFMSFFFAISNMVE-KVPSFKGGGIYWFTDLTTPDELLILPMLTSLTF--------- 314 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++++ + +Q M P K M V+ + SFP + YW SN+ S+ Sbjct: 315 ----LVTVELNMQDGMEGNPMLKTMKNFSRVMAVLTIPFTMSFPKAIFFYWVTSNLFSLG 370 Query: 552 QQAVIMK 558 V+ K Sbjct: 371 YGFVLRK 377 >gi|308504846|ref|XP_003114606.1| hypothetical protein CRE_28281 [Caenorhabditis remanei] gi|308258788|gb|EFP02741.1| hypothetical protein CRE_28281 [Caenorhabditis remanei] Length = 368 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 48/116 (41%), Gaps = 20/116 (17%) Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM----HVGIWPI 495 FFAI K+I+++ W DL A DP + LPF M VGI Sbjct: 199 FFAIKKMIAVNYPGLSTGGILWFTDLTATDP------YYALPFISAATMALVTKVGI--- 249 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 M PP +A + +PVV S F GL +YW+ SN +S++ Sbjct: 250 ----EMGTSADQMPPIM---RAFMSYGLPVVIFGVSSQFATGLCVYWTASNAVSLI 298 >gi|309356301|emb|CAP37412.2| hypothetical protein CBG_20396 [Caenorhabditis briggsae AF16] Length = 301 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 12/116 (10%) Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 FFAI K+++++ W DL A DP + LPF M + + + Sbjct: 132 FFAIKKMVAVNYPGLSEGGALWFTDLTATDP------YYALPFISAATMAL---VTKVGI 182 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 M PP +A + +PVV S F GL +YW+ SN +S++ A Sbjct: 183 EMGTTADQMPPVM---RAFMSYGLPVVIFGVSSQFATGLCVYWTASNAVSLIYAAA 235 >gi|301781256|ref|XP_002926062.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial inner membrane protein OXA1L-like [Ailuropoda melanoleuca] Length = 637 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 57/227 (25%) Query: 359 NFGI----AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 N G+ AI T+ + L FPL K A + N P+I + + +++ L Sbjct: 338 NLGLPWWGAIAACTILARCLVFPLIVKGQREAAKIHNHLPEIQKFSTRMREA---KLAGD 394 Query: 415 MIQLYKT----------HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---- 460 + YK ++I L Q P+F + + + EM + P Sbjct: 395 HAEFYKASSEMTFYQKKYDIKLFRPLILPLTQAPIFISFFIALR---EMANLPVPSLQTG 451 Query: 461 ---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-Q 516 W +DL +DP I+ L P++++ +M+ +++ A+ G Q Sbjct: 452 GLLWFQDLTLSDP--IYVL-----------------PLVVTATMWGVLELG---AETGVQ 489 Query: 517 AMILNWMP-VVFVFALS------SFPAGLIIYWSWSNVISIVQQAVI 556 + L WM V+ V L+ FP + +YW SN+ S+VQ A + Sbjct: 490 SSDLQWMRNVIRVMPLAVLPITIHFPTAVFMYWLSSNMFSLVQVACL 536 >gi|321311061|ref|YP_004193390.1| membrane protein OxaA [Mycoplasma haemofelis str. Langford 1] gi|319802905|emb|CBY93551.1| membrane protein OxaA [Mycoplasma haemofelis str. Langford 1] Length = 379 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 23/196 (11%) Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 +KQ + + + I K D+ KQ+ + Q+ + YK HN+ PLA + PV Sbjct: 171 EKQLLHQSAIDAISSKYDKYDITDKQARLKKHQE-LSAYYKKHNLKPLAILENFFINTPV 229 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F ++KVI+I ++ I DL+ T IF F G+M++ + II+ Sbjct: 230 FLIVFKVITICRPIKFTVLLN-IWDLSKTPLTTIFD-----DFLNEGWMYLVLCLIIIPT 283 Query: 500 SMFIQ-----MKMSPPPADKGQAM-----------ILNWMPVVFVFALSSFPAGLIIYWS 543 + F Q + + P+ K + I M VF+ + GL IY+ Sbjct: 284 NFFSQKTSIWLSQARHPSLKKNIVDKNSQTYKMQRIQKVMTFVFLLFTFFWSTGLAIYYF 343 Query: 544 WSNVISIVQQAVIMKM 559 +++V +I Q +I ++ Sbjct: 344 FNSVFTIFQNLIIHQI 359 >gi|47227450|emb|CAG04598.1| unnamed protein product [Tetraodon nigroviridis] Length = 436 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQV-LQKAMIQL 418 AI++ TV +L FP+ K A + N+ P++ +L + KQS + KA L Sbjct: 144 AIVVGTVLARLAVFPVIVKGQREAAKLNNVLPEMTKLTNRMNEAKQSGNKFEFGKAYSDL 203 Query: 419 ---YKTHNINPLAGCWPILLQIPVFFAIY 444 K H++NPL G L+Q P+F + + Sbjct: 204 TLFQKKHDVNPLRGFLVPLVQAPIFISFF 232 >gi|330723621|gb|AEC45991.1| putative inner membrane protein translocase component YidC [Mycoplasma hyorhinis MCLD] Length = 612 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 28/227 (12%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTA---NMKNIQPKIDELREKFKQSP--PQVLQKAMIQ 417 AI++ + K++ F K + M+ + KID E +K++ Q ++ + Sbjct: 388 AIIVVVLLTKIISFIFRFKTIFGQSKQIEMQAKKAKIDAKYEPYKKNKMMQQRHRQEVAD 447 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT-L 476 LYK +N +P A +L+ +P+F A+++VI + +W + +LA+ +F L Sbjct: 448 LYKKNNFSPFAPFSQVLVTMPIFIAVWRVIQ-GIPSLKVTYWVGL-ELASISYQKLFEGL 505 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQAMILNWMPVVFVF 529 + LP + + V + + L ++ M + K Q + +VF+F Sbjct: 506 WQYLPILI---IVVLVQAVQQLLPKYLNKKNTNRIMNQNESETMKKQQKTQRIISIVFIF 562 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 F A L IYW + I G +G+ RSTF K Sbjct: 563 FGVLFQASLQIYWIIGGLWEI----------GQTLGVHYLQRSTFFK 599 >gi|268561842|ref|XP_002646541.1| Hypothetical protein CBG20396 [Caenorhabditis briggsae] Length = 325 Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust. Identities = 48/208 (23%), Positives = 80/208 (38%), Gaps = 31/208 (14%) Query: 362 IAIMLTTVFVKLLFF-------PLAKKQYVSTANMKNIQPKIDELREK--------FKQS 406 + I+ TT+ ++ L L KQ + M + +IDE R++ Sbjct: 91 LTIVATTITLRALLIGVPVMSQKLVAKQSMYRKEMNEFRDRIDEARKENNQLLQQQILLE 150 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 L+ I+L + + G + FFAI K+++++ W DL Sbjct: 151 QRDFLRSKDIRLGRQFMVMAANGA----VFATQFFAIKKMVAVNYPGLSEGGALWFTDLT 206 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 A DP + LPF M + + + M PP +A + +PVV Sbjct: 207 ATDP------YYALPFISAATMAL---VTKVGIEMGTTADQMPPVM---RAFMSYGLPVV 254 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQA 554 S F GL +YW+ SN +S++ A Sbjct: 255 IFGVSSQFATGLCVYWTASNAVSLIYAA 282 >gi|217033105|ref|ZP_03438569.1| hypothetical protein HPB128_27g12 [Helicobacter pylori B128] gi|216945178|gb|EEC23869.1| hypothetical protein HPB128_27g12 [Helicobacter pylori B128] Length = 369 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 P +I++G F AK +F+L+ Y Y VGN+G AI+ T + Sbjct: 317 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIIFLTYY 359 >gi|330798642|ref|XP_003287360.1| hypothetical protein DICPUDRAFT_18752 [Dictyostelium purpureum] gi|325082627|gb|EGC36103.1| hypothetical protein DICPUDRAFT_18752 [Dictyostelium purpureum] Length = 378 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 40/203 (19%) Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK---FKQSPPQVLQKAMIQLYKTHNI 424 TV ++L FP++ K V++A + I+P++D+ +E+ +Q + ++A + K I Sbjct: 152 TVALRLALFPISIKSRVNSARLLEIKPQLDKFKEQQKLLRQKGAPLSERAEVS-DKITTI 210 Query: 425 NPLAGCWPI------LLQIPVFFAIYKVISISLEMRHAPFWG-----WIKDLAAADPTNI 473 GC PI L +P F + V + + P W DLA++DP Sbjct: 211 LREKGCHPIYSFLLPLSNLP--FLVSSVFAFRDMAENYPSLKDAGMLWFPDLASSDP--- 265 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW----MPVVFVF 529 LF I P I S + +++ + ++ W M V + Sbjct: 266 --LF--------------ILPTICSALYLLATELAFANSQSFLINLVKWVSRIMSVSLIL 309 Query: 530 ALSSFPAGLIIYWSWSNVISIVQ 552 S PA +YW S + +I Q Sbjct: 310 FSPSIPAICYLYWVPSAIFTIAQ 332 >gi|213407700|ref|XP_002174621.1| inner membrane protein cox18 [Schizosaccharomyces japonicus yFS275] gi|212002668|gb|EEB08328.1| inner membrane protein cox18 [Schizosaccharomyces japonicus yFS275] Length = 212 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 34/154 (22%) Query: 417 QLYKTHNINPLAGCWPILL----QIPVFFAIYKVISISLEMRHAPFWG------WIKDLA 466 +LY +P WP+LL QIP F Y + + +R AP W ++L Sbjct: 70 RLYSEFRCSP----WPLLLLPMAQIPCF--AYATLKLRRLVRMAPSSMTTEGAFWFQNLL 123 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ--AMILNWMP 524 DPT G + V + M+ + + + KG A IL+ Sbjct: 124 EPDPT--------------GLLTVSLGLAYMTNAAIVHRRQQFSGLSKGTFIASILSSFA 169 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +++V +LS P+ + +YWS S + S +Q A++ + Sbjct: 170 MIYVASLS--PSAMTLYWSTSALYSTIQNALLYR 201 >gi|118349782|ref|XP_001008172.1| hypothetical protein TTHERM_00009880 [Tetrahymena thermophila] gi|89289939|gb|EAR87927.1| hypothetical protein TTHERM_00009880 [Tetrahymena thermophila SB210] Length = 2721 Score = 38.1 bits (87), Expect = 4.7, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 26/137 (18%) Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHL---DVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 KN +++ S+NL+G F + +GY L + S + +L PS T F ++++ + Sbjct: 360 KNQAVL-SLNLEGNVFSNFEYQGYDLITTSLQSTNYQEIVLRPSQTYYKVFLQINFFN-- 416 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190 + P++ K +F + ++ ++ S + +L + D++ NN+ Sbjct: 417 -------------------ILPSSQQKAIFLPSLSLQYQDNYSSPKQFLIPLDDSLYNNT 457 Query: 191 IDQIRFSPRGRIMRHKP 207 IR SP I HKP Sbjct: 458 -RFIRVSPLTNIFYHKP 473 >gi|12045323|ref|NP_073134.1| putative inner membrane protein translocase component YidC [Mycoplasma genitalium G37] gi|255660033|ref|ZP_05405442.1| putative inner membrane protein translocase component YidC [Mycoplasma genitalium G37] gi|1723167|sp|P47702|OXAA_MYCGE RecName: Full=Membrane protein oxaA gi|3845059|gb|AAC72484.1| membrane protein, putative [Mycoplasma genitalium G37] gi|166078750|gb|ABY79368.1| membrane protein, putative [synthetic Mycoplasma genitalium JCVI-1.0] Length = 385 Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust. Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 44/198 (22%) Query: 384 VSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 ++ M +Q K+ E+ K+K + + Q ++ LYK HNI A + + +P+ Sbjct: 174 LALEKMNEVQGKLAEINAKYKGAIDLQSKRNRQLEIMSLYKKHNIKSSAAFVQVFVTLPI 233 Query: 440 FFAIYKVISISLEMRHA---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 F IY++++ ++ FW DL+ T IF+ F G WP I Sbjct: 234 FLIIYRIVTTLRPIKAIILFNFW----DLSKVPLTEIFS----------NFTTTG-WPFI 278 Query: 497 MSLSM-----FIQMKMSPPPADKG-------------QAMILNWMPVVFVF---ALSSF- 534 + L + F+ K+ A K Q M ++F F A+++F Sbjct: 279 IFLVIVLPVQFLSQKLPQVWASKRNENAKAHSQKSIEQLNKTKKMQLIFYFVFAAITAFS 338 Query: 535 PAGLIIYWSWSNVISIVQ 552 AG+ +YW + + +++Q Sbjct: 339 AAGVGVYWFLNALFTLLQ 356 >gi|304373458|ref|YP_003856667.1| Membrane protein oxaA [Mycoplasma hyorhinis HUB-1] gi|304309649|gb|ADM22129.1| Membrane protein oxaA [Mycoplasma hyorhinis HUB-1] Length = 612 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 18/193 (9%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTA---NMKNIQPKIDELREKFKQSP--PQVLQKAMIQ 417 AI++ + K++ F K + M+ + KID E +K++ Q ++ + Sbjct: 388 AIIVVVLLTKIISFIFRFKTIFGQSKQIEMQAKKAKIDAKYEPYKKNKMMQQRHRQEVAD 447 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT-L 476 LYK +N +P A +L+ +P+F A+++VI + +W + +LA+ +F L Sbjct: 448 LYKKNNFSPFAPFSQVLVTMPIFIAVWRVIQ-GIPSLKVTYWVGL-ELASISYQKLFEGL 505 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQAMILNWMPVVFVF 529 + LP + + V + + L ++ M + K Q + +VF+F Sbjct: 506 WQYLPILI---IVVLVQAVQQLLPKYLNKKNTNRIMNQNESETMKKQQKTQRIISIVFIF 562 Query: 530 ALSSFPAGLIIYW 542 F A L IYW Sbjct: 563 FGVLFQASLQIYW 575 >gi|218134370|ref|ZP_03463174.1| hypothetical protein BACPEC_02264 [Bacteroides pectinophilus ATCC 43243] gi|217989755|gb|EEC55766.1| hypothetical protein BACPEC_02264 [Bacteroides pectinophilus ATCC 43243] Length = 265 Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 11/76 (14%) Query: 494 PIIMSLSMFIQMKM-----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 PI+ ++ ++ ++M PA M+ MP++ S PAGL +YW Sbjct: 87 PILAGVTQYLSVRMMQTQNPATGNNEDNPAAASMKMMNTVMPIMSAVMAISLPAGLGLYW 146 Query: 543 SWSNVISIVQQAVIMK 558 S + V I+QQ +I K Sbjct: 147 SATAVFQILQQFIINK 162 >gi|224049074|ref|XP_002192470.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 340 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 57/211 (27%) Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSP------------------PQVLQKAMIQ 417 PLA +Q A ++N+QP+I EL ++ + + +++ + + Sbjct: 105 LPLAAQQGRLLAKLENLQPEIKELAQRLRYEVSARGKQLGWSEKVARLHFARNMRRIVTE 164 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---------------WI 462 LY N +P + +Q+P++ + +SL +R+ W Sbjct: 165 LYIRDNCHPFKATLLLWVQVPMW------VCVSLALRNCSIGARGSAVQEQFSSGGALWF 218 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL A D T ILP L G +++ + I S Q KM P + Q ++ N+ Sbjct: 219 TDLTAPDST------WILPVSL-GLVNLLVVEIFAS-----QTKM---PVSRIQKLLTNF 263 Query: 523 ---MPVVFVFALSSFPAGLIIYWSWSNVISI 550 + VV + ++ P+ + +YW S+++ + Sbjct: 264 FRTVSVVMIPIAATVPSSMALYWLSSSLVGL 294 >gi|72081003|ref|YP_288061.1| putative inner membrane protein translocase component YidC [Mycoplasma hyopneumoniae 7448] gi|71914127|gb|AAZ54038.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448] Length = 609 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 10/129 (7%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ---PKIDELREKFKQSP--PQVLQKAMI 416 ++I+ VF K++ F K +Q KID E +K++ Q ++ ++ Sbjct: 384 LSILAVVVFTKIISFIFRFKTIFGQNKQMELQLKKAKIDAKYENYKKNKVMQQRHRQEIV 443 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYK +N +P + IL+ +P+F A+++ + + F G +LAA +F Sbjct: 444 DLYKKNNFSPFSPFSQILVTMPIFIAVWRALQGIPSFKVTYFLGL--ELAATSYQKLFEG 501 Query: 477 FGILPFYLP 485 + I YLP Sbjct: 502 YWI---YLP 507 >gi|54020659|ref|YP_116204.1| putative inner membrane protein translocase component YidC [Mycoplasma hyopneumoniae 232] gi|71894022|ref|YP_279468.1| putative inner membrane protein translocase component YidC [Mycoplasma hyopneumoniae J] gi|53987832|gb|AAV28033.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232] gi|71852149|gb|AAZ44757.1| conserved hypothetical protein [Mycoplasma hyopneumoniae J] Length = 609 Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 10/129 (7%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ---PKIDELREKFKQSP--PQVLQKAMI 416 ++I+ VF K++ F K +Q KID E +K++ Q ++ ++ Sbjct: 384 LSILAVVVFTKIISFIFRFKTIFGQNKQMELQLKKAKIDAKYENYKKNKVMQQRHRQEIV 443 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYK +N +P + IL+ +P+F A+++ + + F G +LAA +F Sbjct: 444 DLYKKNNFSPFSPFSQILVTMPIFIAVWRALQGIPSFKVTYFLGL--ELAATSYQKLFEG 501 Query: 477 FGILPFYLP 485 + I YLP Sbjct: 502 YWI---YLP 507 >gi|312601631|gb|ADQ90886.1| Putative uncharacterized protein [Mycoplasma hyopneumoniae 168] Length = 609 Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 10/129 (7%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ---PKIDELREKFKQSP--PQVLQKAMI 416 ++I+ VF K++ F K +Q KID E +K++ Q ++ ++ Sbjct: 384 LSILAVVVFTKIISFIFRFKTIFGQNKQMELQLKKAKIDAKYENYKKNKVMQQRHRQEIV 443 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYK +N +P + IL+ +P+F A+++ + + F G +LAA +F Sbjct: 444 DLYKKNNFSPFSPFSQILVTMPIFIAVWRALQGIPSFKVTYFLGL--ELAATSYQKLFEG 501 Query: 477 FGILPFYLP 485 + I YLP Sbjct: 502 YWI---YLP 507 >gi|313112535|ref|ZP_07798200.1| inner membrane protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310625135|gb|EFQ08425.1| inner membrane protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 219 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 12/120 (10%) Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 F+ ++ +I+ +H F G D T I L L LP + V I M LS Sbjct: 30 FSAEQIATITEFSQHMNFLGI-------DLTRIPKLGLSLDIVLP-LLSV----ITMLLS 77 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 I MK S + + MP++++F ++P +Y+ SN++ VQ V+ K++ Sbjct: 78 THISMKASGQQMQGSMKLTMYMMPLMYLFFCFTYPLAFSLYYVISNIVMTVQTQVMRKVY 137 >gi|71980488|ref|NP_493356.2| hypothetical protein C01A2.3 [Caenorhabditis elegans] gi|63108013|emb|CAB02698.2| C. elegans protein C01A2.3, confirmed by transcript evidence [Caenorhabditis elegans] Length = 366 Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 20/119 (16%) Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM----HVGIWPI 495 FFAI K++ ++ W DL A DP + LPF M VGI Sbjct: 197 FFAIKKMVVVNYPGLSTGGTLWFTDLTATDP------YYALPFISAATMALVTKVGI--- 247 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 M PP +A + +PVV S F GL +YW+ SN +S++ A Sbjct: 248 ----EMGTSADQMPPIM---RAFMTYGLPVVIFGVSSQFATGLCVYWTASNAVSLIYAA 299 >gi|331092108|ref|ZP_08340939.1| hypothetical protein HMPREF9477_01582 [Lachnospiraceae bacterium 2_1_46FAA] gi|330402309|gb|EGG81880.1| hypothetical protein HMPREF9477_01582 [Lachnospiraceae bacterium 2_1_46FAA] Length = 420 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 6/114 (5%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL--LFFPLAKKQYVSTANMKNIQPKID 397 + + K M + + NL G I I + + + L PL KQ + + P+I Sbjct: 19 WLLGKLMDGIFNVMSNLFGIENIGICIIIFTIIIYTLLIPLTIKQQKFSKMSAAMNPEIQ 78 Query: 398 ELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +++K+K Q +Q+ +Y + +P GC +L+Q P+ +++VI Sbjct: 79 AIQKKYKGKRDQTSVLKMQEETQMVYDKYGTSPTGGCGSLLIQFPILLGLWQVI 132 >gi|313889769|ref|ZP_07823411.1| putative stage III sporulation protein J [Streptococcus pseudoporcinus SPIN 20026] gi|313121814|gb|EFR44911.1| putative stage III sporulation protein J [Streptococcus pseudoporcinus SPIN 20026] Length = 270 Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust. Identities = 52/225 (23%), Positives = 103/225 (45%), Gaps = 35/225 (15%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF AK + L +N GI + + + L+ PL Q S+ M+++Q Sbjct: 32 GWDQLVYFFAKSVQWLS---FNGSIGLGIILFTLLIRLLLM--PLFNIQIKSSQKMQDLQ 86 Query: 394 PKIDELREKF--KQSPPQV-LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ +++ K+ K S ++ L LYK++ +NP A +P+++Q+P+ A+++ ++ Sbjct: 87 PELKKIQAKYPGKDSESRMALADETQALYKSNGVNPYASLFPLIIQMPIMIALFQALTRV 146 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ---MKM 507 ++ F W +LA D H+ I PI+ +L F+ + Sbjct: 147 PFLKTGTFL-WT-ELAQHD-------------------HLYILPILAALFTFLSSWLTNL 185 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + ++ MP++ F +G+++YW SN + Q Sbjct: 186 AAKEKNMVMTVMTYMMPLMIFFMGFKLASGVVLYWVISNAFQVFQ 230 >gi|511461|gb|AAA56921.1| unknown [Coxiella burnetii] Length = 131 Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust. Identities = 15/38 (39%), Positives = 25/38 (65%) Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +PV+F +FPAGL++YW +NV+ +QQ + K + Sbjct: 5 LPVIFTVFFINFPAGLVLYWITNNVVQTLQQWYVNKTY 42 Searching..................................................done Results from round 2 >gi|254780483|ref|YP_003064896.1| putative inner membrane protein translocase component YidC [Candidatus Liberibacter asiaticus str. psy62] gi|254040160|gb|ACT56956.1| putative inner membrane protein translocase component YidC [Candidatus Liberibacter asiaticus str. psy62] Length = 581 Score = 763 bits (1971), Expect = 0.0, Method: Composition-based stats. Identities = 581/581 (100%), Positives = 581/581 (100%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD Sbjct: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY Sbjct: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF Sbjct: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS Sbjct: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK Sbjct: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF Sbjct: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK Sbjct: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL Sbjct: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII Sbjct: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ Sbjct: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 >gi|315122061|ref|YP_004062550.1| putative inner membrane protein translocase component YidC [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495463|gb|ADR52062.1| putative inner membrane protein translocase component YidC [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 578 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 443/581 (76%), Positives = 501/581 (86%), Gaps = 3/581 (0%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME+NWNYF AIA+SV IVY WQ YV PRIE + +K T+++ + N+ V ID+ Sbjct: 1 MEKNWNYFAAIAISVAIVYVWQLVYVQPRIEAIKEGKKTPLTIEK-QSIQNTI--VPIDN 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 RAQALS SPRVE+ +PSL GSINLKGAQFDDL+L+GY +DVS NSP+V LL+P NT+NAY Sbjct: 58 RAQALSRSPRVEINSPSLAGSINLKGAQFDDLSLKGYRVDVSRNSPMVALLNPLNTENAY 117 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 FAEL+Y+ST N PN NTVWNL+SG++LTP++PIKL FK+ANNILFER ISLDE+YLF Sbjct: 118 FAELNYISTTNTTVFPNENTVWNLVSGQVLTPSSPIKLAFKSANNILFERIISLDENYLF 177 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 IVDT+TNN + I FSP G+I R+K Q +N+FGVQEGFIAVLGD+SL+E+KYSDIEKS Sbjct: 178 TIVDTITNNGTNLISFSPYGKITRYKLQKESNSFGVQEGFIAVLGDQSLIEKKYSDIEKS 237 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 S+SNFHESNSWLGISDKYWAS FIP KE SF S+F Y SDG ARYQA F NEI + PGK Sbjct: 238 SVSNFHESNSWLGISDKYWASAFIPPKEKSFQSRFDYFSDGRARYQANFKINEIILSPGK 297 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 S TTN LF GAKE P I HYEK+L IPRFEMLIDWGWFYFIAKPMF LMSYFYNLVGNF Sbjct: 298 STKTTNSLFVGAKELPIIQHYEKELEIPRFEMLIDWGWFYFIAKPMFALMSYFYNLVGNF 357 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 GIAIMLTT+FVK LFFPLAKKQYVSTANMKNIQPKID LREKFKQ+ PQVLQK M+QLYK Sbjct: 358 GIAIMLTTIFVKALFFPLAKKQYVSTANMKNIQPKIDALREKFKQASPQVLQKEMLQLYK 417 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 TH INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF+GWI+DLAA DPTNIFTLFGIL Sbjct: 418 THKINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFFGWIQDLAAPDPTNIFTLFGIL 477 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 PF LP F+HVGIWPIIMSLSMF+Q+KMSPPP DKGQA++LNWMPVVFVFALSSFPAGLII Sbjct: 478 PFQLPEFIHVGIWPIIMSLSMFLQLKMSPPPTDKGQAIVLNWMPVVFVFALSSFPAGLII 537 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 YWSWSN+ISI+QQ VIMKM+GA+I +IDRLRS F+K+ NS+ Sbjct: 538 YWSWSNIISIIQQTVIMKMYGAKIDIIDRLRSMFAKSSNSK 578 >gi|86356094|ref|YP_467986.1| putative inner membrane protein translocase component YidC [Rhizobium etli CFN 42] gi|86280196|gb|ABC89259.1| putative inner membrane transmembrane protein [Rhizobium etli CFN 42] Length = 597 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 293/593 (49%), Positives = 389/593 (65%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----------------ERKNIQTVK 44 ME N NYF+AIALSV+IV WQ Y+ PRIE Q Sbjct: 1 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQTQQPAAGGQAPA 60 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 Q + S A R QAL +PR+ + +L GSINL GA+ DDL L+GYH V + Sbjct: 61 QTSGAAPSGQAAATATREQALEKTPRIAIDTAALSGSINLAGARLDDLKLKGYHETVDDS 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SP +TL SP+ TK+ YF EL Y+ + +P +T+W G LT TP+ L + N Sbjct: 121 SPTITLFSPAETKDGYFTELGYIGSDTTGAVPGPSTLWTAPEGAKLTEKTPVTLSYTNDK 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F + D + N S GR+MR+ T + + + EGFI V+ Sbjct: 181 GLTFTRTISVDERYMFTVADKIENTGQAPAALSSYGRVMRYNKPTTPSVYVLHEGFIGVI 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD L+E KYS +EK ++S + WLGI+DKYWA+ +P + +++ ++F Y SDG R Sbjct: 241 GDDGLIESKYSAVEKEAVSPAKSAGGWLGITDKYWAATIVPPQSSAYEAKFSYFSDGQPR 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + ++ PG+SI N +FAGAKE P I YE +IP+F+ LIDWGWFYFI K Sbjct: 301 YQADYKNDAFSVAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPKFDRLIDWGWFYFITK 360 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +FY GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 361 PMFKLMDFFYRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFG 420 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+AM+QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD Sbjct: 421 DD-RMGLQQAMMQLYKDEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 479 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P F+H+G+WP+IM ++MF+QM+M+P P D QAMI NWMP Sbjct: 480 LSAPDPTTIVNLFGLLPFEAPTFLHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFNWMP 539 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK HG +I L D LR F + Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRHGVKIELFDNLRGLFRRK 592 >gi|116250222|ref|YP_766060.1| inner membrane protein translocase component YidC [Rhizobium leguminosarum bv. viciae 3841] gi|166977404|sp|Q1MM58|OXAA_RHIL3 RecName: Full=Inner membrane protein oxaA gi|115254870|emb|CAK05944.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 598 Score = 665 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 289/593 (48%), Positives = 384/593 (64%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----------------ERKNIQTVK 44 ME N NYF+AIALSV+IV WQ Y+ PRIE QT Sbjct: 2 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGQTPA 61 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 Q + S A QAL SPRV + P+L GSINL GA+ DDL L+GYH V + Sbjct: 62 QTSGAAPSGQAAATATLEQALQKSPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDS 121 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SPI+TL SP+ TK+ YF EL Y+ + +P +T+W G LT TP+ L + N Sbjct: 122 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGPSTLWTAPEGAKLTEKTPVTLSYTNDK 181 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F + D + N S GR+ R+ T + + + EGFI V+ Sbjct: 182 GLTFTRTISVDERYMFTVADKIENTGQAPAALSSYGRVTRYNKPTTPSVYVLHEGFIGVI 241 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD L+E KYS +EK +++ + WLGI+DKYWA+ +P + ++ + F Y +DG R Sbjct: 242 GDDGLIETKYSAVEKEAVAPAKSTGGWLGITDKYWAATIVPPQSAAYEAHFSYFADGQPR 301 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + T+ PG+SI N +FAGAKE P I YE +IP+F+ LIDWGWFYFI K Sbjct: 302 YQADYKDDAFTVAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPKFDRLIDWGWFYFITK 361 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +F+ GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 362 PMFKLMDFFFRYFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFA 421 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD Sbjct: 422 DD-RMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 480 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P +H+G+WP+IM ++MF+QM+M+P P D QAMI NWMP Sbjct: 481 LSAPDPTTIVNLFGLLPFEGPTLLHLGVWPLIMGVTMFVQMRMNPTPPDPTQAMIFNWMP 540 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S+ QQ +IMK HG ++ L D L+ F + Sbjct: 541 LVFMFMLASFPAGLVIYWAWNNTLSVAQQGLIMKRHGVKVELFDNLKGLFRRK 593 >gi|241202849|ref|YP_002973945.1| inner membrane protein translocase component YidC [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856739|gb|ACS54406.1| 60 kDa inner membrane insertion protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 597 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 287/593 (48%), Positives = 385/593 (64%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI----------------QTVK 44 ME N NYF+AIALSV+IV WQ Y+ PRIE ++ QT Sbjct: 1 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKVQEAQKAQQQTEQVQQPAAGGQTPA 60 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 QP+ + A QAL+ SPRV + +L GSINL GA+ DDL L+GYH V + Sbjct: 61 QPSGAAPTSQAAATATLEQALAKSPRVVIDTAALSGSINLAGARLDDLKLKGYHETVDDS 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SPI+TL SP+ TK+ YF EL Y+ + +P +T+W G LT TP+ L + N Sbjct: 121 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGPSTLWTAPEGAKLTEKTPVTLSYTNDK 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F + D + N + GR+ R+ T + + + EGFI V+ Sbjct: 181 GLTFTRTISVDERYMFTVADKIENAGQAPASLNSYGRVTRYNKPTTPSVYVLHEGFIGVI 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD LVE KY+ EK ++ + WLGI+DKYWA+ +P + + + F + +DG R Sbjct: 241 GDDGLVETKYTAAEKEAVKPAKSTGGWLGITDKYWAATIVPPQSAPYEASFSHFADGQPR 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + T+ PG+SI N +FAGAKE P I YE +IP+F+ LIDWGWFYFI K Sbjct: 301 YQADYKEDAFTVAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPKFDRLIDWGWFYFITK 360 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +F+ GNFG+AI+ TT+ VKLLFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 361 PMFKLMDFFFRYFGNFGVAILCTTIVVKLLFFPLASKQYASMANMKRMQPKMEELKAKFA 420 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD Sbjct: 421 DD-RMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 479 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P +H+G+WP+IM ++MF+QM+M+P P D QAMI WMP Sbjct: 480 LSAPDPTTIVNLFGLLPFEAPTILHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFTWMP 539 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S+ QQ+VIMK HG ++ L D L+ F + Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVAQQSVIMKRHGVKVELFDNLKGLFRRK 592 >gi|150395307|ref|YP_001325774.1| putative inner membrane protein translocase component YidC [Sinorhizobium medicae WSM419] gi|166977420|sp|A6U5K9|OXAA_SINMW RecName: Full=Inner membrane protein oxaA gi|150026822|gb|ABR58939.1| 60 kDa inner membrane insertion protein [Sinorhizobium medicae WSM419] Length = 597 Score = 664 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 290/594 (48%), Positives = 396/594 (66%), Gaps = 16/594 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE--------MNNERKNIQTVKQPNQVDNS 52 ME N NYFVAIALSV+I+ AWQ FYV P++E+ + + P Q Sbjct: 2 MENNRNYFVAIALSVLILIAWQFFYVSPKMEKDRIAAEKAQQAQSQPGTQQAAPGQAAPG 61 Query: 53 YA------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 A + R QA+ S RV + P+L GSINL GA+FDDL L+GY V SP Sbjct: 62 QALPGGAIPSAAESRDQAIGKSARVAIDTPALSGSINLTGARFDDLKLKGYRETVDPKSP 121 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 ++TL SP+ T + YF E+ Y+ + +P TVW L G LTP+TP+ L + N I Sbjct: 122 VITLFSPAETADGYFTEIGYIGSDATGSVPGPQTVWMLSGGDKLTPSTPVTLSYTNDKGI 181 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 F RTIS+D+ Y+F++VD++ N++ + S GR+ R + + + + EGF+ V G+ Sbjct: 182 TFTRTISVDDRYMFEVVDSIKNDAAAAVSLSSYGRVTRFNKPSTPSIYVLHEGFVGVAGE 241 Query: 227 KSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 L E YSD+E + + WLGI+DKYWA+ +P ++T F +F + +DG RY Sbjct: 242 HGLQEVGYSDVEDEEPVEPGKSTGGWLGITDKYWAATIVPPQDTPFDIRFSHFADGRPRY 301 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 Q+ + ++ +T+ PG+S N +FAGAKE P + +YE +IP F+ LIDWGWFYFI KP Sbjct: 302 QSDYKSDAVTVAPGQSAEVKNLIFAGAKEVPVVDNYELTYSIPNFDKLIDWGWFYFITKP 361 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 MF +M +F+ L GNFGIAI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF Sbjct: 362 MFKMMDFFFRLFGNFGIAILITTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGD 421 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 LQ+AM+QLYK INPLAGCWPIL+QIPVFFA+YKVI +++EMRHAPF+GWI+DL Sbjct: 422 D-RMGLQQAMMQLYKEEKINPLAGCWPILIQIPVFFALYKVIYVTIEMRHAPFFGWIQDL 480 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 +A DPT I LFG+LPF P F+H+GIWPI+M ++MF+QM+M+P P D QAM+ WMPV Sbjct: 481 SAPDPTTIINLFGLLPFEGPAFLHLGIWPIVMGVTMFLQMRMNPTPPDPTQAMLFTWMPV 540 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 VF F L+SFPAGL+IYW+W+N +SI+QQ +IMK G ++ L D L+S FSK Sbjct: 541 VFTFMLASFPAGLVIYWAWNNTLSILQQGIIMKRQGVKVELFDNLKSLFSKKPK 594 >gi|209547692|ref|YP_002279609.1| inner membrane protein translocase component YidC [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533448|gb|ACI53383.1| 60 kDa inner membrane insertion protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 597 Score = 663 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 288/593 (48%), Positives = 391/593 (65%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 ME+N NYF+AIALSV+IV WQ Y+ PRIE ++ + ++ QV Sbjct: 1 MEKNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQKTEQVQQPAANGAAPA 60 Query: 52 -------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 S AV QAL+ +PRV + P+L GSINL GA+ DDL L+GYH V + Sbjct: 61 PTSGTAPSGQAVATATLEQALAKNPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDS 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SP +TL SP+ TK+ YF EL Y+ + +P ++T+W G LT TP+ L + N Sbjct: 121 SPTITLFSPAETKDGYFTELGYIGSDATGNVPGASTLWTAPEGAKLTDKTPVTLSYTNDK 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F + D V N + S GR+ R+ T + + + EGFI V+ Sbjct: 181 GLTFTRTISVDERYMFTVADKVENTGQAPVSLSSYGRVTRYNKPTTPSVYVLHEGFIGVI 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD LVE KY+ EK ++ + WLGI+DKYWA+ IP + +++ ++F + +DG R Sbjct: 241 GDDGLVETKYTAAEKEAVMPPKSTGGWLGITDKYWAATIIPPQTSAYEARFSHFADGQPR 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + T+ PG+SI N +FAGAKE P I YE +IP+F+ LIDWGWFYFI K Sbjct: 301 YQADYKDDAFTVAPGQSIELKNLVFAGAKEVPVIDGYETSYSIPKFDRLIDWGWFYFITK 360 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +FY GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 361 PMFKLMDFFYRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFA 420 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD Sbjct: 421 DD-RMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 479 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P +H+G+WP+IM ++MF+QM+M+P P D QAMI WMP Sbjct: 480 LSAPDPTTIVNLFGLLPFEAPTILHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFTWMP 539 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK G ++ L D L+ F + Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRQGVKVELFDNLKGLFRRK 592 >gi|307301342|ref|ZP_07581104.1| YidC/Oxa1 family domain containing membrane protein insertase [Sinorhizobium meliloti BL225C] gi|307318012|ref|ZP_07597449.1| YidC/Oxa1 family domain containing membrane protein insertase [Sinorhizobium meliloti AK83] gi|38503127|sp|Q92SF5|OXAA_RHIME RecName: Full=Inner membrane protein oxaA gi|306896414|gb|EFN27163.1| YidC/Oxa1 family domain containing membrane protein insertase [Sinorhizobium meliloti AK83] gi|306903798|gb|EFN34385.1| YidC/Oxa1 family domain containing membrane protein insertase [Sinorhizobium meliloti BL225C] Length = 594 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 289/592 (48%), Positives = 393/592 (66%), Gaps = 14/592 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN-----------NERKNIQTVKQPNQV 49 ME N NYFVAIALSV+I+ AWQ FYV P++E+ +++ P Q Sbjct: 1 MENNRNYFVAIALSVLILIAWQFFYVSPKMEKDRIAAEQAQQAQQTQQQPGAQPAAPGQA 60 Query: 50 -DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 + R QA+ S RV + P+L GSINL GA+FDDL L+GY V SP++ Sbjct: 61 LPGGAIPSAGESRDQAIGKSARVAIDTPALSGSINLTGARFDDLKLKGYRETVDPKSPVI 120 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 TL SP+ T + YF E+ Y+ + +P T W L G LTP+TP+ L + N I F Sbjct: 121 TLFSPAETADGYFTEIGYIGSDATGSVPGPQTTWTLSGGDKLTPSTPVTLSYTNDKGITF 180 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 RTIS+D+ Y+F++VD++ N + + S GR+ R T + + + EGF+ V G+ Sbjct: 181 ARTISVDDRYMFQVVDSIKNETAAPVSLSSYGRVTRFNKPTTPSIYVLHEGFVGVAGEHG 240 Query: 229 LVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 L E YS +E + + WLGI+DKYWA+ +P + T F +F + +DG RYQ+ Sbjct: 241 LQEVGYSKVEDDEPVEPGKSTGGWLGITDKYWAATIVPPQATPFDIRFSHFADGRPRYQS 300 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + ++ +T+ PG+S+ N +FAGAKE P + +YE +IP F+ LIDWGWFYFI KPMF Sbjct: 301 DYKSDAVTVAPGQSVELKNLVFAGAKEVPVVDNYEVAYSIPNFDKLIDWGWFYFITKPMF 360 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +M +F+ L GNFGIAI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF Sbjct: 361 KMMDFFFRLFGNFGIAILITTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGDD- 419 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 LQ+AM+QLYK INPLAGCWPIL+QIPVFFA+YKVI +++EMRHAPF+GWI+DL+A Sbjct: 420 RMGLQQAMMQLYKEEKINPLAGCWPILIQIPVFFALYKVIYVTIEMRHAPFFGWIQDLSA 479 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DPT I LFG+LPF P F+H+GIWPIIM ++MF+QM+M+P P D QAM+ WMPVVF Sbjct: 480 PDPTTIINLFGLLPFEGPAFLHLGIWPIIMGVTMFLQMRMNPTPPDPTQAMLFTWMPVVF 539 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 F L+SFPAGL+IYW+W+N +SI+QQ +IMK G ++ L D L+S FSK Sbjct: 540 TFMLASFPAGLVIYWAWNNTLSILQQGIIMKRQGVKVELFDNLKSLFSKKPK 591 >gi|222084728|ref|YP_002543257.1| preprotein translocase 60 kD membrane subunit [Agrobacterium radiobacter K84] gi|221722176|gb|ACM25332.1| preprotein translocase 60 kD membrane subunit [Agrobacterium radiobacter K84] Length = 600 Score = 657 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 285/597 (47%), Positives = 393/597 (65%), Gaps = 20/597 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN-------------------NERKNIQ 41 ME NYF+AIALSV+IV AWQ FY+ PR+E N Sbjct: 1 MENKRNYFIAIALSVLIVLAWQFFYMNPRLEAQRKAEQAAKLQQQTQQAQTTQNPAAGAT 60 Query: 42 TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 S L D++ A S + RV + P+L GSINL+GA+FDDL L+ YH V Sbjct: 61 VDGAAPSSGQSAPTTLTHDQSVAKSAASRVAIDTPALSGSINLEGARFDDLQLKAYHETV 120 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 +SPI+TL SP++TK+ YF EL YV + +P +TVW L SG LT +TP+ L + Sbjct: 121 DKSSPIITLFSPADTKDGYFTELGYVGSDATGAVPGPSTVWTLASGSKLTDSTPVTLSYT 180 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 N I F RT+S+DE Y+F I D + N+ + S GR+ R+ T + + + EGFI Sbjct: 181 NDKGITFTRTVSVDERYMFTITDKIANSGQAPVSLSSYGRVTRYNKPTTPSAYVLHEGFI 240 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 V+GD L+E KY+ EK +++ + WLGI+DKYWA+ +P + ++ + F + +DG Sbjct: 241 GVIGDDGLIETKYTAAEKEAVNPAKATGGWLGITDKYWAATIVPPQSGAYDAHFSHFADG 300 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 RYQA + + +T+ PG+S + +FAGAKE P I YE +IP+F+ LIDWGWFYF Sbjct: 301 QPRYQADYKQDAVTVAPGQSQELKSLVFAGAKEVPVIDRYETSYSIPKFDRLIDWGWFYF 360 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I KPMF LM +F+ GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ Sbjct: 361 ITKPMFKLMDFFFRYFGNFGVAILCTTIVVKGLFFPLASKQYASMANMKRMQPKMEELKA 420 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 KF LQ+A +QLYK INP+AGCWP+LLQIP+FF++YKVI I++EMRHAPF+GW Sbjct: 421 KFGDD-RMGLQQATMQLYKEEKINPIAGCWPVLLQIPIFFSLYKVIYITIEMRHAPFFGW 479 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I+DL+A DPT+I LFG+LPF P +H+G+WP+IM ++MF+QM+M+P P D QAMI N Sbjct: 480 IQDLSAPDPTSIVNLFGLLPFTAPTILHLGVWPLIMGITMFLQMRMNPTPPDPTQAMIFN 539 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 WMP+VF+F L+SFPAGL+IYW+W+N +S++QQ++IMK HG ++ L D ++ F + Sbjct: 540 WMPLVFMFMLASFPAGLVIYWAWNNTLSVIQQSIIMKRHGVKVELFDNMKGLFKRKP 596 >gi|15964197|ref|NP_384550.1| putative inner membrane protein translocase component YidC [Sinorhizobium meliloti 1021] gi|15073373|emb|CAC41881.1| Putative inner-membrane transmembrane protein [Sinorhizobium meliloti 1021] Length = 595 Score = 657 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 289/592 (48%), Positives = 393/592 (66%), Gaps = 14/592 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN-----------NERKNIQTVKQPNQV 49 ME N NYFVAIALSV+I+ AWQ FYV P++E+ +++ P Q Sbjct: 2 MENNRNYFVAIALSVLILIAWQFFYVSPKMEKDRIAAEQAQQAQQTQQQPGAQPAAPGQA 61 Query: 50 -DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 + R QA+ S RV + P+L GSINL GA+FDDL L+GY V SP++ Sbjct: 62 LPGGAIPSAGESRDQAIGKSARVAIDTPALSGSINLTGARFDDLKLKGYRETVDPKSPVI 121 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 TL SP+ T + YF E+ Y+ + +P T W L G LTP+TP+ L + N I F Sbjct: 122 TLFSPAETADGYFTEIGYIGSDATGSVPGPQTTWTLSGGDKLTPSTPVTLSYTNDKGITF 181 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 RTIS+D+ Y+F++VD++ N + + S GR+ R T + + + EGF+ V G+ Sbjct: 182 ARTISVDDRYMFQVVDSIKNETAAPVSLSSYGRVTRFNKPTTPSIYVLHEGFVGVAGEHG 241 Query: 229 LVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 L E YS +E + + WLGI+DKYWA+ +P + T F +F + +DG RYQ+ Sbjct: 242 LQEVGYSKVEDDEPVEPGKSTGGWLGITDKYWAATIVPPQATPFDIRFSHFADGRPRYQS 301 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + ++ +T+ PG+S+ N +FAGAKE P + +YE +IP F+ LIDWGWFYFI KPMF Sbjct: 302 DYKSDAVTVAPGQSVELKNLVFAGAKEVPVVDNYEVAYSIPNFDKLIDWGWFYFITKPMF 361 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +M +F+ L GNFGIAI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF Sbjct: 362 KMMDFFFRLFGNFGIAILITTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGDD- 420 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 LQ+AM+QLYK INPLAGCWPIL+QIPVFFA+YKVI +++EMRHAPF+GWI+DL+A Sbjct: 421 RMGLQQAMMQLYKEEKINPLAGCWPILIQIPVFFALYKVIYVTIEMRHAPFFGWIQDLSA 480 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DPT I LFG+LPF P F+H+GIWPIIM ++MF+QM+M+P P D QAM+ WMPVVF Sbjct: 481 PDPTTIINLFGLLPFEGPAFLHLGIWPIIMGVTMFLQMRMNPTPPDPTQAMLFTWMPVVF 540 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 F L+SFPAGL+IYW+W+N +SI+QQ +IMK G ++ L D L+S FSK Sbjct: 541 TFMLASFPAGLVIYWAWNNTLSILQQGIIMKRQGVKVELFDNLKSLFSKKPK 592 >gi|239832645|ref|ZP_04680974.1| Inner membrane protein oxaA [Ochrobactrum intermedium LMG 3301] gi|239824912|gb|EEQ96480.1| Inner membrane protein oxaA [Ochrobactrum intermedium LMG 3301] Length = 624 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 275/608 (45%), Positives = 383/608 (62%), Gaps = 29/608 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK--------------------NI 40 ME N N+F+ IALS++++ WQ FY+ P+ E + + N Sbjct: 15 MENNRNFFITIALSILVLTLWQVFYLGPKSEAQREQARIEEQQQQKQQATQQQAQGSQNG 74 Query: 41 QTVKQPNQVDNSY------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 T + P N A R A++ + R+E+ PSL GSINL GA+ DD+ L Sbjct: 75 DTPQMPAASGNVPGHSDVAAGGGTLTREAAVAQTQRIEIDTPSLRGSINLTGARLDDIFL 134 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH V +NSP + LL+PS + YF EL + +P NTVW + LT T Sbjct: 135 KNYHETVDNNSPNIELLAPSPLQQGYFVELGFTGNETTGPVPGPNTVWTVEGNNRLTQTA 194 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNT 213 P+ L + N NI F+R IS+DE Y+F + DT+ NNS I + GR+ R ++P+ A+ T Sbjct: 195 PVTLTYTNEKNITFKRIISVDESYMFSVEDTIVNNSGAPISLASYGRVTRFNQPEHASAT 254 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KYS IE + +F + WLGI+DKYWA+ IP ++ F Sbjct: 255 YVLHEGLIGVMGQDGLQEIKYSKIEDNKDISFKDVQGGWLGITDKYWAATLIPPQDEKFT 314 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQA F +TI PG++ T N +FAGAK I +YE+ L I +FE+ Sbjct: 315 GRFSHFTNDRPRYQADFLGAPMTIAPGQTQTVKNHVFAGAKVVSLIKNYEETLGIKQFEL 374 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 375 LIDWGWFYFITKPMFYLIDWIYKFSGNFGVAILVVTVLLKGLFFPLANKSYKSMARMKLV 434 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ Q+ M++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 435 QPKLTEIREKYADDK-MRQQQEMMKLYKEEKINPLAGCWPVLVQIPVFFALYKVLYVTIE 493 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT++F LFG+LPF +P F+ +G+WP++M ++MF+QM+M+P P Sbjct: 494 MRHAPFFGWIQDLAAPDPTSLFNLFGLLPFAVPHFLMIGVWPLLMGITMFLQMRMNPTPP 553 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMPV+F F L+SFPAGL+IYW+W+N++SI QQ +IMK G +I L D L+S Sbjct: 554 DPTQAAIFTWMPVIFTFMLASFPAGLVIYWAWNNLLSITQQGIIMKRQGVKIELFDNLKS 613 Query: 573 TFSKNYNS 580 F + Sbjct: 614 LFKRKPKE 621 >gi|153008692|ref|YP_001369907.1| putative inner membrane protein translocase component YidC [Ochrobactrum anthropi ATCC 49188] gi|151560580|gb|ABS14078.1| 60 kDa inner membrane insertion protein [Ochrobactrum anthropi ATCC 49188] Length = 607 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 275/605 (45%), Positives = 383/605 (63%), Gaps = 26/605 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ-----------------TV 43 ME N N+F+ IALS++++ WQ FY+ P+ E + + + T Sbjct: 1 MENNRNFFITIALSILVLTLWQVFYLGPKTEAQREQARIEEQQQQKQQATQQQAQSGDTP 60 Query: 44 KQPNQVDNSY------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + P N AA R A++ + RVE+ PSL GSINL GA+ DDL L+ Y Sbjct: 61 QMPATSGNIPGHSDVAAAGGTLTREAAVAQTQRVEIDTPSLRGSINLTGARLDDLFLKRY 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 H V NSP + LL+PS K YF EL + +P NTVW + LTP+TP+ Sbjct: 121 HETVDDNSPQIELLAPSALKQGYFVELGFTGNDTTGPVPGPNTVWTVEGNNKLTPSTPVT 180 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGV 216 L + N NI F+R IS+D+ Y+F + DT+TNN+ I + GR+ R ++P+ A+ T+ + Sbjct: 181 LTYTNEKNITFKRVISVDDAYMFAVEDTITNNTGAPISLASYGRVTRFNQPEHASATYVL 240 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQF 275 EG I V+G L E KYS +E +F + S WLGI+DKYWA+ +P ++ F +F Sbjct: 241 HEGLIGVMGQDGLQEIKYSKVEDDKDISFKDVSGGWLGITDKYWAATLVPPQDEKFTGRF 300 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + ++ RYQ F +TI PG++ T N +FAGAK I YE+ L I +FE+LID Sbjct: 301 SHFTNDRPRYQTDFLGAPMTIAPGQAQTLKNHVFAGAKVVSNIKAYEEKLGIKQFELLID 360 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK +QPK Sbjct: 361 WGWFYFITKPMFYLIDWIYKFSGNFGVAILVVTVLLKGLFFPLANKSYKSMARMKLVQPK 420 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + E+REK+ Q+ M++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++EMRH Sbjct: 421 LTEIREKYADDK-MKQQQEMMRLYKEEKINPLAGCWPVLVQIPVFFALYKVLYVTIEMRH 479 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 APF+GWI+DLAA DPT++F LFG+LPF +P F+ +G+WP++M ++MF+QM+M+P P D Sbjct: 480 APFFGWIQDLAAPDPTSLFNLFGLLPFGVPHFLMIGVWPLLMGITMFLQMRMNPTPPDPT 539 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 QA I WMPV+F F L+SFPAGL+IYW+W+N++SI QQ +IMK G +I L D L+ F Sbjct: 540 QAAIFTWMPVIFTFMLASFPAGLVIYWAWNNLLSITQQGIIMKRQGVKIELFDNLKGLFK 599 Query: 576 KNYNS 580 + Sbjct: 600 RKPKE 604 >gi|327192535|gb|EGE59487.1| inner membrane transmembrane protein [Rhizobium etli CNPAF512] Length = 597 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 291/593 (49%), Positives = 390/593 (65%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----------------ERKNIQTVK 44 ME N NYF+AIALSV+IV WQ Y+ PRIE T Sbjct: 1 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGATPA 60 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + S AV QAL+ +PRV + P+L GSINL GA+ DDL L+GYH V + Sbjct: 61 PTSGTAPSGQAVATATLEQALAKTPRVAIDTPALSGSINLAGARLDDLKLKGYHETVDDS 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SPI+TL SP+ TK+ YF EL Y+ + +P ++T+W G LT TP+ L + N Sbjct: 121 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGASTLWTAPEGAKLTEKTPVTLSYTNDK 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F I D V N + S GR+ R+ T + + + EGFI V+ Sbjct: 181 GLTFTRTISVDERYMFTIADKVANTGQAPVSLSSYGRVTRYNKPTTPSAYVLHEGFIGVI 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD L+E KY+ +EK ++ + WLGI+DKYWA+ +P + +++ ++F + +DG R Sbjct: 241 GDDGLIESKYTAVEKEAVMPAKSTGGWLGITDKYWAATIVPPQASAYEARFSHFADGQPR 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + TI PG+SI N +FAGAKE P I YE +IPRF+ LIDWGWFYFI K Sbjct: 301 YQADYKDDAFTIAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPRFDRLIDWGWFYFITK 360 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +F+ GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 361 PMFKLMDFFFRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFG 420 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWI+D Sbjct: 421 DD-RMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIQD 479 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P F+H+G+WP+IM ++MF+QM+M+P P D QAMI NWMP Sbjct: 480 LSAPDPTTIVNLFGLLPFTAPTFLHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFNWMP 539 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK HG +I L D L+ F + Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRHGVKIELFDNLKGLFRRK 592 >gi|227820669|ref|YP_002824639.1| putative inner membrane protein translocase component YidC [Sinorhizobium fredii NGR234] gi|254773017|sp|C3MF49|OXAA_RHISN RecName: Full=Inner membrane protein oxaA gi|227339668|gb|ACP23886.1| putative inner membrane protein translocase component YidC [Sinorhizobium fredii NGR234] Length = 592 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 292/590 (49%), Positives = 395/590 (66%), Gaps = 13/590 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 ME N NYFVAIALSV+I+ AWQ FYV PR+++ + Q +Q Sbjct: 2 MENNRNYFVAIALSVLILVAWQYFYVNPRMDKDRIAAEKAQQTQQVQPQQGGQQPAPGQA 61 Query: 52 -SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 AV + R QA++ S RV + P+L GSINL GA+FDDL L+GYH V SP++TL Sbjct: 62 LPGGAVPGESRDQAVAKSARVAIDTPALSGSINLTGARFDDLKLKGYHETVDPKSPVITL 121 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 SP+ T + YF E+ Y+ + +P TVW L G+ LTP TP+ L + N I F R Sbjct: 122 FSPAETADGYFTEIGYIGNDASGSVPGPQTVWTLSGGEKLTPATPVTLTYTNDKGITFAR 181 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 TIS+DE+Y+F++VD++ N+ + S GR+ R T + + + EGFI V G SL Sbjct: 182 TISIDENYMFQVVDSIKNDGSAPVSLSSYGRVTRFNKPTTPSIYVLHEGFIGVAG-GSLQ 240 Query: 231 EQKYSDIEKS-SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 E YS IE++ + + W GI+DKYWA+ +P +ET F +F + +DG R+Q+ + Sbjct: 241 EVGYSKIEENLPVEPGKTTGGWHGITDKYWAAAIVPPQETPFDIRFSHFTDGRPRFQSDY 300 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + +T+ PG+S N +FAGAKE + Y AIP+FE LIDWGWF+FI +PMF + Sbjct: 301 KGDAVTVAPGQSAEVKNLVFAGAKEVQVVDTYTTAYAIPKFEKLIDWGWFWFITQPMFKM 360 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M +F+ L GNFG+AI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF Sbjct: 361 MDFFFRLFGNFGVAILVTTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGDD-RM 419 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 LQ+AM+QLYK INPLAGCWPIL+QIPVFFA+YKVI I++EMRHAPF+GWI+DL+A D Sbjct: 420 GLQQAMMQLYKDEKINPLAGCWPILIQIPVFFALYKVIYITIEMRHAPFFGWIRDLSAPD 479 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT I LFG+LPF P F+H+GIWPIIM ++MF+QM+M+P P D QAM+ WMP+VF F Sbjct: 480 PTTIVNLFGLLPFDGPAFLHLGIWPIIMGVTMFLQMRMNPTPPDPTQAMLFTWMPLVFTF 539 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 L+SFPAGL+IYW+W+N +SI QQ++IMK G +I L D L+ F+K Sbjct: 540 MLASFPAGLVIYWAWNNTLSITQQSIIMKRQGVKIELFDNLKGLFTKRPK 589 >gi|90419893|ref|ZP_01227802.1| putative inner membrane protein [Aurantimonas manganoxydans SI85-9A1] gi|90335934|gb|EAS49682.1| putative inner membrane protein [Aurantimonas manganoxydans SI85-9A1] Length = 609 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 264/607 (43%), Positives = 370/607 (60%), Gaps = 30/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ-----------TVKQPNQV 49 M+ N N+ +A+ LS+ ++ WQ V PR+E E + Q T + P Sbjct: 1 MQNNRNFLIAMILSIGVLVGWQFLVVSPRMEAQRLETEAAQPTVAQNDGSLQTPQTPAGT 60 Query: 50 DNSYAAVLI----------------DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 A + R QA++ RV + P+L GSINL GA+ DDL Sbjct: 61 PQDNVAAPAGRESVVPEQDALPATDETREQAIAAGSRVAIDTPALSGSINLTGARLDDLR 120 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ YH V +SP + LLSP + YFAE Y+ ELP +T+W G+ LTP Sbjct: 121 LKNYHETVDDSSPTIVLLSPERLPSGYFAEFGYLGRDAG-ELPGPSTIWQAEGGQSLTPN 179 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 +P+ L N + FERTIS+D+ ++F DT+ N + S GR+ R+ + Sbjct: 180 SPVTLTATNGAGVTFERTISVDDRFMFTYEDTIRNEGSAPLTLSSYGRVTRYSKPEVASV 239 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSI-SNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + EG + V GD L E KYS IE + S+ WLGI+DKYWA+ +P F Sbjct: 240 YVLFEGLLGVFGDDGLSEIKYSTIEDDQRYTPPKSSSGWLGITDKYWATTLVPEAGRPFQ 299 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 S+F Y++DG YQ ++ + +T+ PG + T + FAGAK I YE+ I +F Sbjct: 300 SRFLYMTDGRPHYQTEYVTDPVTVEPGATATNVSRTFAGAKVVSDIDSYEERYDIRQFGQ 359 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI +PMF + + Y+++GNFG+AI+ TV +KL+FFPLA K Y S A MKN+ Sbjct: 360 LIDWGWFYFITRPMFHALDWLYSVIGNFGVAILAVTVVLKLIFFPLANKSYKSMARMKNM 419 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPKI E+RE+FK Q Q+ M+++Y+ INP AGCWPIL+QIPVFFA+YKV+ +++E Sbjct: 420 QPKIMEMRERFKDDK-QKQQQEMMRIYREEKINPAAGCWPILIQIPVFFALYKVLYVTIE 478 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG++P LP + VG+WPI+M ++MF+QM+++P P Sbjct: 479 MRHAPFFGWIQDLAAPDPTSIFNLFGLIPLELPHLLMVGVWPILMGITMFVQMRLNPTPP 538 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D Q MI WMPVVF F L+SFPAGL+IYW+W+N++S++QQ+VIMK +G +I L D LR Sbjct: 539 DPTQQMIFTWMPVVFTFMLASFPAGLVIYWTWNNLLSVIQQSVIMKRNGTKIELWDNLRG 598 Query: 573 TFSKNYN 579 F + Sbjct: 599 MFRRKEK 605 >gi|294853976|ref|ZP_06794648.1| preprotein translocase YidC subunit [Brucella sp. NVSL 07-0026] gi|294819631|gb|EFG36631.1| preprotein translocase YidC subunit [Brucella sp. NVSL 07-0026] Length = 610 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 273/608 (44%), Positives = 384/608 (63%), Gaps = 29/608 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--------------------KNI 40 ME N+F+ IALS++I+ WQ FY+ P+ E + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 41 QTVKQPNQVDN------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 T + P D+ + AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KYS IE + +F + W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYSKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDK-MKQQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYNS 580 F + Sbjct: 600 LFRRKPKE 607 >gi|254712779|ref|ZP_05174590.1| putative inner membrane protein translocase component YidC [Brucella ceti M644/93/1] gi|254715848|ref|ZP_05177659.1| putative inner membrane protein translocase component YidC [Brucella ceti M13/05/1] gi|261217609|ref|ZP_05931890.1| inner membrane protein oxaA [Brucella ceti M13/05/1] gi|261320486|ref|ZP_05959683.1| inner membrane protein oxaA [Brucella ceti M644/93/1] gi|260922698|gb|EEX89266.1| inner membrane protein oxaA [Brucella ceti M13/05/1] gi|261293176|gb|EEX96672.1| inner membrane protein oxaA [Brucella ceti M644/93/1] Length = 609 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 272/607 (44%), Positives = 384/607 (63%), Gaps = 28/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER-------------------KNIQ 41 ME N+F+ IALS++I+ WQ FY+ P+ E + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSTGD 60 Query: 42 TVKQPNQVDN------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 T + P D+ + AA R A++ SPR+E+ PSL GSINL GA+ DDL L+ Sbjct: 61 TPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYLK 120 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+TP Sbjct: 121 KYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPSTP 180 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTF 214 + L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ T+ Sbjct: 181 VTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASATY 240 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHS 273 + EG I V+G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ F Sbjct: 241 VLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFTG 300 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++L Sbjct: 301 RFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDLL 360 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 IDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK +Q Sbjct: 361 IDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLMQ 420 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ E+REK+ Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++EM Sbjct: 421 PKMTEIREKYADDK-MKQQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIEM 479 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 RHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P D Sbjct: 480 RHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPPD 539 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 PTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKGL 599 Query: 574 FSKNYNS 580 F + Sbjct: 600 FRRKPKE 606 >gi|190890108|ref|YP_001976650.1| inner membrane transmembrane protein [Rhizobium etli CIAT 652] gi|254773016|sp|B3Q040|OXAA_RHIE6 RecName: Full=Inner membrane protein oxaA gi|190695387|gb|ACE89472.1| inner membrane transmembrane protein [Rhizobium etli CIAT 652] Length = 598 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 290/593 (48%), Positives = 394/593 (66%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP-------------- 46 ME N NYF+AIALSV+IV WQ Y+ PRIE ++ + +Q Sbjct: 2 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGATPA 61 Query: 47 --NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + S AV QAL+ +PRV + P+L GSINL GA+ DDL L+GYH V + Sbjct: 62 PASGTAPSGQAVATATLEQALAKTPRVAIDTPALSGSINLAGARLDDLKLKGYHETVDDS 121 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SPI+TL SP+ TK+ YF EL Y+ + +P ++T+W G LT TP+ L + N Sbjct: 122 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGASTLWTAPEGAKLTEKTPVTLSYTNDK 181 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F I D V N + S GR+ R+ T + + + EGFI V+ Sbjct: 182 GLTFTRTISVDERYMFTIADKVANTGQAPVSLSSYGRVTRYNKPTTPSAYVLHEGFIGVI 241 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD L+E KY+ +EK ++ + WLGI+DKYWA+ +P + +++ ++F + SDG R Sbjct: 242 GDDGLIESKYTAVEKEAVMPAKSTGGWLGITDKYWAATIVPPQASAYEARFSHFSDGQPR 301 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + T+ PG+S+ N +FAGAKE P I YE +IPRF+ LIDWGWFYFI K Sbjct: 302 YQADYKDDAFTVAPGQSVELKNLVFAGAKEVPVIDGYEASYSIPRFDRLIDWGWFYFITK 361 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +F+ GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 362 PMFKLMDFFFRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFG 421 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWI+D Sbjct: 422 DD-RMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIQD 480 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P F+H+G+WP+IM ++MF+QM+M+P P D QAMI NWMP Sbjct: 481 LSAPDPTTIVNLFGLLPFTAPTFLHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFNWMP 540 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK HG +I L D L+ F + Sbjct: 541 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRHGVKIELFDNLKGLFRRK 593 >gi|114706827|ref|ZP_01439727.1| putative inner membrane transmembrane protein [Fulvimarina pelagi HTCC2506] gi|114537775|gb|EAU40899.1| putative inner membrane transmembrane protein [Fulvimarina pelagi HTCC2506] Length = 603 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 273/601 (45%), Positives = 371/601 (61%), Gaps = 24/601 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------TVKQPNQVDNSYA 54 ME N N+ +A+ALS++++ WQ + PR++E + + Q T + P D Sbjct: 1 MEMNRNFLIAMALSIMVLVGWQFLVIGPRMDEQQRQNEIAQNEGSLQTPQTPAGSDQDSL 60 Query: 55 AVLI--------------DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 R Q ++ RV + P L GSINL GA+ DDL L+ YH Sbjct: 61 TAPSGRESMVPSPNLPQNQSREQVIAGGNRVTIDTPELTGSINLTGARLDDLRLKHYHET 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 V +SP + LLSP N YFAE + +L +NT W G LTP TP+ L Sbjct: 121 VDDSSPTIVLLSPEELPNGYFAEYGLI-QPGTGQLVGANTEWQAEDGAELTPDTPVTLTA 179 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + + R IS+D++++F DTV N ++ SP GRI R+ F + EG Sbjct: 180 TTESGLTVTRRISVDDNFMFTYEDTVENTGDAAVQVSPYGRIARYSKPEVAAAFVLFEGL 239 Query: 221 IAVLGDKSLVEQKYSDIEKSSI--SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + V G++ L E YSDIE + WLGI+DKYWA+ +P F SQF Y Sbjct: 240 LGVFGEEGLDEVSYSDIEDDTRLRQPASSGGGWLGITDKYWATALVPEVGRDFESQFLYR 299 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 ++G + YQ +F ++ ++I PG + + N FAGAKE I+ YE+ L I +F LIDWGW Sbjct: 300 TNGRSHYQTEFVSDPVSIAPGAAASMVNRTFAGAKEVDKINAYEEQLNIRQFGQLIDWGW 359 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FYFI +PMF + Y Y LVGNFGIAI+ TV +KL+FFPLA K Y S A MK IQPK+ E Sbjct: 360 FYFITRPMFTALDYIYRLVGNFGIAILAVTVILKLIFFPLANKSYKSMARMKTIQPKVME 419 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 LRE+FK Q Q+ M+QLY++ INP AGCWPIL+QIPVFFA+YKV+ +++EMRHAPF Sbjct: 420 LRERFKDD-RQKQQQEMMQLYRSEKINPAAGCWPILIQIPVFFALYKVLYVTIEMRHAPF 478 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI+DLAA DPT+IF LFG+LP+ +PG + +G+WP++M L+MFIQM+++P P D QAM Sbjct: 479 FGWIQDLAAPDPTSIFNLFGLLPYDVPGILLIGVWPLLMGLTMFIQMRLNPTPPDPTQAM 538 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I WMPVVF F L++FPAGL+IYW+W+N +SI+QQ+VIMK +GA+I L D LR F + Sbjct: 539 IFTWMPVVFTFMLATFPAGLVIYWTWNNFLSIIQQSVIMKRNGAKIELFDNLRGMFKRKE 598 Query: 579 N 579 Sbjct: 599 K 599 >gi|62317852|ref|YP_223705.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 1 str. 9-941] gi|83269831|ref|YP_419122.1| putative inner membrane protein translocase component YidC [Brucella melitensis biovar Abortus 2308] gi|163845137|ref|YP_001622792.1| putative inner membrane protein translocase component YidC [Brucella suis ATCC 23445] gi|189023102|ref|YP_001932843.1| putative inner membrane protein translocase component YidC [Brucella abortus S19] gi|225629472|ref|ZP_03787505.1| Inner membrane protein oxaA [Brucella ceti str. Cudo] gi|237817392|ref|ZP_04596384.1| Inner membrane protein oxaA [Brucella abortus str. 2308 A] gi|254690662|ref|ZP_05153916.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 6 str. 870] gi|254696033|ref|ZP_05157861.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 3 str. Tulya] gi|254699142|ref|ZP_05160970.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 2 str. 86/8/59] gi|254700218|ref|ZP_05162046.1| putative inner membrane protein translocase component YidC [Brucella suis bv. 5 str. 513] gi|254705520|ref|ZP_05167348.1| putative inner membrane protein translocase component YidC [Brucella pinnipedialis M163/99/10] gi|254710751|ref|ZP_05172562.1| putative inner membrane protein translocase component YidC [Brucella pinnipedialis B2/94] gi|254732586|ref|ZP_05191164.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 4 str. 292] gi|256015782|ref|YP_003105791.1| putative inner membrane protein translocase component YidC [Brucella microti CCM 4915] gi|256029134|ref|ZP_05442748.1| putative inner membrane protein translocase component YidC [Brucella pinnipedialis M292/94/1] gi|256058817|ref|ZP_05449033.1| putative inner membrane protein translocase component YidC [Brucella neotomae 5K33] gi|256111044|ref|ZP_05452106.1| putative inner membrane protein translocase component YidC [Brucella melitensis bv. 3 str. Ether] gi|256157326|ref|ZP_05455244.1| putative inner membrane protein translocase component YidC [Brucella ceti M490/95/1] gi|256253696|ref|ZP_05459232.1| putative inner membrane protein translocase component YidC [Brucella ceti B1/94] gi|256255844|ref|ZP_05461380.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 9 str. C68] gi|260167774|ref|ZP_05754585.1| putative inner membrane protein translocase component YidC [Brucella sp. F5/99] gi|260545087|ref|ZP_05820908.1| inner membrane protein [Brucella abortus NCTC 8038] gi|260756233|ref|ZP_05868581.1| inner membrane protein oxaA [Brucella abortus bv. 6 str. 870] gi|260760398|ref|ZP_05872746.1| inner membrane protein oxaA [Brucella abortus bv. 4 str. 292] gi|260763638|ref|ZP_05875970.1| inner membrane protein oxaA [Brucella abortus bv. 2 str. 86/8/59] gi|260882057|ref|ZP_05893671.1| inner membrane protein oxaA [Brucella abortus bv. 9 str. C68] gi|261216465|ref|ZP_05930746.1| inner membrane protein oxaA [Brucella abortus bv. 3 str. Tulya] gi|261220833|ref|ZP_05935114.1| inner membrane protein oxaA [Brucella ceti B1/94] gi|261312924|ref|ZP_05952121.1| inner membrane protein oxaA [Brucella pinnipedialis M163/99/10] gi|261318319|ref|ZP_05957516.1| inner membrane protein oxaA [Brucella pinnipedialis B2/94] gi|261322754|ref|ZP_05961951.1| inner membrane protein oxaA [Brucella neotomae 5K33] gi|261750713|ref|ZP_05994422.1| inner membrane protein oxaA [Brucella suis bv. 5 str. 513] gi|261757211|ref|ZP_06000920.1| inner membrane protein [Brucella sp. F5/99] gi|265986117|ref|ZP_06098674.1| inner membrane protein oxaA [Brucella pinnipedialis M292/94/1] gi|265992579|ref|ZP_06105136.1| inner membrane protein oxaA [Brucella melitensis bv. 3 str. Ether] gi|265995811|ref|ZP_06108368.1| inner membrane protein oxaA [Brucella ceti M490/95/1] gi|297249212|ref|ZP_06932913.1| preprotein translocase YidC subunit [Brucella abortus bv. 5 str. B3196] gi|62198045|gb|AAX76344.1| inner-membrane protein, 60 kDa [Brucella abortus bv. 1 str. 9-941] gi|82940105|emb|CAJ13152.1| 60 kDa inner membrane protein [Brucella melitensis biovar Abortus 2308] gi|163675860|gb|ABY39970.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|189021676|gb|ACD74397.1| 60 kDa inner membrane protein [Brucella abortus S19] gi|225615968|gb|EEH13017.1| Inner membrane protein oxaA [Brucella ceti str. Cudo] gi|237788205|gb|EEP62421.1| Inner membrane protein oxaA [Brucella abortus str. 2308 A] gi|255998442|gb|ACU50129.1| putative inner membrane protein translocase component YidC [Brucella microti CCM 4915] gi|260098358|gb|EEW82232.1| inner membrane protein [Brucella abortus NCTC 8038] gi|260670716|gb|EEX57656.1| inner membrane protein oxaA [Brucella abortus bv. 4 str. 292] gi|260674059|gb|EEX60880.1| inner membrane protein oxaA [Brucella abortus bv. 2 str. 86/8/59] gi|260676341|gb|EEX63162.1| inner membrane protein oxaA [Brucella abortus bv. 6 str. 870] gi|260871585|gb|EEX78654.1| inner membrane protein oxaA [Brucella abortus bv. 9 str. C68] gi|260918072|gb|EEX84933.1| inner membrane protein oxaA [Brucella abortus bv. 3 str. Tulya] gi|260919417|gb|EEX86070.1| inner membrane protein oxaA [Brucella ceti B1/94] gi|261297542|gb|EEY01039.1| inner membrane protein oxaA [Brucella pinnipedialis B2/94] gi|261298734|gb|EEY02231.1| inner membrane protein oxaA [Brucella neotomae 5K33] gi|261301950|gb|EEY05447.1| inner membrane protein oxaA [Brucella pinnipedialis M163/99/10] gi|261737195|gb|EEY25191.1| inner membrane protein [Brucella sp. F5/99] gi|261740466|gb|EEY28392.1| inner membrane protein oxaA [Brucella suis bv. 5 str. 513] gi|262550108|gb|EEZ06269.1| inner membrane protein oxaA [Brucella ceti M490/95/1] gi|262763449|gb|EEZ09481.1| inner membrane protein oxaA [Brucella melitensis bv. 3 str. Ether] gi|264658314|gb|EEZ28575.1| inner membrane protein oxaA [Brucella pinnipedialis M292/94/1] gi|297173081|gb|EFH32445.1| preprotein translocase YidC subunit [Brucella abortus bv. 5 str. B3196] Length = 610 Score = 642 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 272/608 (44%), Positives = 384/608 (63%), Gaps = 29/608 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--------------------KNI 40 ME N+F+ IALS++I+ WQ FY+ P+ E + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 41 QTVKQPNQVDN------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 T + P D+ + AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDK-MKQQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYNS 580 F + Sbjct: 600 LFRRKPKE 607 >gi|225686778|ref|YP_002734750.1| putative inner membrane protein translocase component YidC [Brucella melitensis ATCC 23457] gi|256262088|ref|ZP_05464620.1| inner membrane protein [Brucella melitensis bv. 2 str. 63/9] gi|225642883|gb|ACO02796.1| Inner membrane protein oxaA [Brucella melitensis ATCC 23457] gi|263091777|gb|EEZ16108.1| inner membrane protein [Brucella melitensis bv. 2 str. 63/9] gi|326411186|gb|ADZ68250.1| putative inner membrane protein translocase component YidC [Brucella melitensis M28] gi|326554477|gb|ADZ89116.1| putative inner membrane protein translocase component YidC [Brucella melitensis M5-90] Length = 610 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 272/608 (44%), Positives = 384/608 (63%), Gaps = 29/608 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--------------------KNI 40 ME N+F+ IALS++I+ WQ FY+ P+ E + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 41 QTVKQPNQVDN------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 T + P D+ + AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDK-MKQQQAMMELYKRERINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYNS 580 F + Sbjct: 600 LFRRKPKE 607 >gi|325291817|ref|YP_004277681.1| inner membrane protein translocase component YidC [Agrobacterium sp. H13-3] gi|325059670|gb|ADY63361.1| putative inner membrane protein translocase component YidC [Agrobacterium sp. H13-3] Length = 600 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 286/596 (47%), Positives = 399/596 (66%), Gaps = 19/596 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME+N NYF+AIALSV+IV AWQ Y+ PRIE+ + Q +Q Q + A Sbjct: 2 MEKNRNYFIAIALSVVIVLAWQFLYMNPRIEQQRRAEEARQAQQQTTQQQPAPGAAPGVT 61 Query: 61 RAQA-----------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 A ++ S RV + ++ GSINL GA+FDD+ L+GYH V Sbjct: 62 ADGAPPASSTQAAATATREEAIAKSQRVAIDTNAIAGSINLTGARFDDIRLKGYHETVDD 121 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +SPI+TL SPS+TK+ YF EL YV A+ +P TVW L SG LT TTP+ L + N Sbjct: 122 SSPIITLFSPSDTKDGYFTELGYVGGADAGSVPGPATVWTLASGDKLTETTPVTLKYTNQ 181 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 N ++F RT+S+D+HY+ + D V N + F+ GR+ R+ F + EGF+ V Sbjct: 182 NGVVFSRTVSIDQHYMITVNDKVENPGQAPVSFATYGRVTRNNKPAIPPVFVIHEGFLGV 241 Query: 224 LG-DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 G D SL E+KY D+E++ ++ + WLGI+DKYWA+ +P + T F +++ ++ Sbjct: 242 SGKDGSLTEEKYKDVEETPVTIAKATGGWLGITDKYWAAAIVPPQMTPFETRYSHIKGNQ 301 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQA F ++ +T+ PG+SI + +FAGAKE P + YE + +IP+F++LIDWGWFYFI Sbjct: 302 PSYQADFKSDTMTVEPGQSIELKSLVFAGAKEVPLVDRYETEYSIPKFDLLIDWGWFYFI 361 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KPMF +M +F+ GNFG+AI+LTT+ VK LFFPLA KQY S ANMK +QPK++EL+ K Sbjct: 362 TKPMFKMMDFFFRYFGNFGVAILLTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAK 421 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +Q+AM+QLYK INP+AGCWP+LLQIPVFFA+YKVI +++EMRHAPF+GWI Sbjct: 422 HGDD-RMAMQQAMMQLYKEEKINPVAGCWPMLLQIPVFFALYKVIYVTIEMRHAPFFGWI 480 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+A DPT++F LFG+LP+ +P F+ +G+WP++M ++MF+QM+M+P P D QAMI W Sbjct: 481 HDLSAPDPTSLFNLFGLLPYDVPHFLMIGVWPLVMGITMFLQMRMNPTPPDPTQAMIFTW 540 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 MP++F F L+SFPAGL+IYW+W+N +SI QQA+IMK HGA+I L D L+ F + Sbjct: 541 MPLIFTFMLASFPAGLVIYWAWNNTLSISQQALIMKRHGAKIELFDNLKGLFKRKP 596 >gi|306846225|ref|ZP_07478787.1| inner membrane protein translocase component YidC [Brucella sp. BO1] gi|306273476|gb|EFM55337.1| inner membrane protein translocase component YidC [Brucella sp. BO1] Length = 610 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 272/608 (44%), Positives = 385/608 (63%), Gaps = 29/608 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--------------------KNI 40 ME N+F+ IALS++I+ WQ FY+ P+ E + Sbjct: 1 MENKRNFFITIALSILILTLWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 41 QTVKQPNQVDN------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 T + P D+ + AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + K LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGTVPGPNTVWVVEGNKKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ N+ + + GR+ R ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINDGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDK-MKQQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYNS 580 F + Sbjct: 600 LFRRKPKE 607 >gi|23500746|ref|NP_700186.1| putative inner membrane protein translocase component YidC [Brucella suis 1330] gi|38503028|sp|Q8FV29|OXAA_BRUSU RecName: Full=Inner membrane protein oxaA gi|23464400|gb|AAN34191.1| inner-membrane protein, 60 kDa [Brucella suis 1330] Length = 610 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 271/608 (44%), Positives = 384/608 (63%), Gaps = 29/608 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--------------------KNI 40 ME N+F+ IALS++I+ WQ FY+ P+ E + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 41 QTVKQPNQVDN------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 T + P D+ + AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ I+ + +F + W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIKDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDK-MKQQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYNS 580 F + Sbjct: 600 LFRRKPKE 607 >gi|148558174|ref|YP_001257934.1| putative inner membrane protein translocase component YidC [Brucella ovis ATCC 25840] gi|148369459|gb|ABQ62331.1| inner-membrane protein, 60 kDa [Brucella ovis ATCC 25840] Length = 610 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 271/608 (44%), Positives = 384/608 (63%), Gaps = 29/608 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--------------------KNI 40 ME N+F+ IALS++I+ WQ FY+ P+ E + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 41 QTVKQPNQVDN------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 T + P D+ + AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFAGNDATGAVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNT 213 P+ L + N ++ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ T Sbjct: 181 PVTLTYTNDKSLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDK-MKQQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYNS 580 F + Sbjct: 600 LFRRKPKE 607 >gi|161621071|ref|YP_001594957.1| putative inner membrane protein translocase component YidC [Brucella canis ATCC 23365] gi|254703339|ref|ZP_05165167.1| putative inner membrane protein translocase component YidC [Brucella suis bv. 3 str. 686] gi|260567731|ref|ZP_05838200.1| inner membrane protein oxaA [Brucella suis bv. 4 str. 40] gi|261753969|ref|ZP_05997678.1| inner membrane protein oxaA [Brucella suis bv. 3 str. 686] gi|161337882|gb|ABX64186.1| Inner membrane protein oxaA [Brucella canis ATCC 23365] gi|260154396|gb|EEW89477.1| inner membrane protein oxaA [Brucella suis bv. 4 str. 40] gi|261743722|gb|EEY31648.1| inner membrane protein oxaA [Brucella suis bv. 3 str. 686] Length = 610 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 271/608 (44%), Positives = 384/608 (63%), Gaps = 29/608 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--------------------KNI 40 ME N+F+ IALS++I+ WQ FY+ P+ E + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEVQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 41 QTVKQPNQVDN------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 T + P D+ + AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ I+ + +F + W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIKDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDK-MKQQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYNS 580 F + Sbjct: 600 LFRRKPKE 607 >gi|161511178|ref|NP_541252.2| putative inner membrane protein translocase component YidC [Brucella melitensis bv. 1 str. 16M] gi|256043891|ref|ZP_05446811.1| putative inner membrane protein translocase component YidC [Brucella melitensis bv. 1 str. Rev.1] gi|260565068|ref|ZP_05835553.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. 16M] gi|265990314|ref|ZP_06102871.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. Rev.1] gi|38503114|sp|Q8YDA3|OXAA_BRUME RecName: Full=Inner membrane protein oxaA gi|260152711|gb|EEW87804.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. 16M] gi|263000983|gb|EEZ13673.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. Rev.1] Length = 610 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 272/608 (44%), Positives = 383/608 (62%), Gaps = 29/608 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--------------------KNI 40 ME N+F+ IALS++I+ WQ FY+ P+ E + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 41 QTVKQPNQVDN------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 T + P D+ + AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDK-MKQQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM + MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGIIMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYNS 580 F + Sbjct: 600 LFRRKPKE 607 >gi|254720149|ref|ZP_05181960.1| putative inner membrane protein translocase component YidC [Brucella sp. 83/13] gi|265985155|ref|ZP_06097890.1| inner membrane protein oxaA [Brucella sp. 83/13] gi|306839545|ref|ZP_07472352.1| inner membrane protein translocase component YidC [Brucella sp. NF 2653] gi|264663747|gb|EEZ34008.1| inner membrane protein oxaA [Brucella sp. 83/13] gi|306405377|gb|EFM61649.1| inner membrane protein translocase component YidC [Brucella sp. NF 2653] Length = 610 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 271/608 (44%), Positives = 384/608 (63%), Gaps = 29/608 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--------------------KNI 40 ME N+F+ IALS++I+ WQ FY+ P+ E + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 41 QTVKQPNQVDN------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 T + P D+ + AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGTVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ N+ + + GR+ R ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINDGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDK-MKQQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYNS 580 F + Sbjct: 600 LFRRKPKE 607 >gi|75677253|ref|YP_319674.1| putative inner membrane protein translocase component YidC [Nitrobacter winogradskyi Nb-255] gi|74422123|gb|ABA06322.1| protein translocase subunit yidC [Nitrobacter winogradskyi Nb-255] Length = 614 Score = 637 bits (1644), Expect = e-180, Method: Composition-based stats. Identities = 247/610 (40%), Positives = 368/610 (60%), Gaps = 30/610 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE----------RKNIQTVKQPNQVD 50 M N N +AI LS +++ AWQ FY P++E+ + Q PN Sbjct: 1 MSENRNTIIAIVLSALVLIAWQYFYNIPQMEKDRAAHQAQSELAKSQSKSQGEAAPNTAA 60 Query: 51 --NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 S A + R A++ PRV++ P L GSI+L GA+ DDL L Y V+ SP + Sbjct: 61 PGQSAAGSAVVARDVAIASKPRVQINTPRLSGSISLTGARIDDLLLTKYRETVNPASPAI 120 Query: 109 TLLSPSNTKNAYFAELDYV-STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 L SPS T + Y+AE +V T + + +P+ +T+W LTP+TP+ L + N + Sbjct: 121 ELFSPSGTASPYYAEFGWVPGTGSTVRVPDRSTLWQQEGAGALTPSTPVTLKYDNGEGLT 180 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 F RT+S+D+ YLF I D VTN + P I RH + + + EG I LGD+ Sbjct: 181 FRRTVSVDDQYLFTIKDEVTNTGSAPVTLYPFALISRHGTPEISGYYILHEGLIGYLGDQ 240 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQ 286 L E Y +I+++ F+ +N WLGI+DKYWA+ +P ++F G R YQ Sbjct: 241 KLQEYSYKNIDEAGSVTFNVTNGWLGITDKYWAAALLPDTSARLQARFSSDQAGAVRTYQ 300 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKE---------FPTIHHYEKDLAIPRFEMLIDWG 337 + + TI G + + LFAGAKE + Y K L + F++LIDWG Sbjct: 301 TDYLEDARTIPAGGTGAVSTRLFAGAKEAGVVGLNFPLAELGGYNKQLGLNHFDLLIDWG 360 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WFYFI KPMF+ + +F+++ GNFG++I++ TV +KL+FFPLA + Y S A MK IQP+I+ Sbjct: 361 WFYFITKPMFLALDFFFHVFGNFGVSILVVTVLIKLVFFPLANRSYASMAKMKAIQPQIN 420 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 LRE + LQ+ M+++YK INP++GC P+LLQIPVFF++YKV+ +++EMRHAP Sbjct: 421 ALRELYPDD-RMKLQQEMMEIYKKEKINPISGCLPVLLQIPVFFSLYKVLFVTIEMRHAP 479 Query: 458 FWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 F+ WIKDL+A DPT+IF LFG+LP+ + ++ +G WPIIM ++M+ QMK++P P Sbjct: 480 FFAWIKDLSAPDPTHIFNLFGLLPYDPSVVPLIGPYLAIGAWPIIMGVTMWFQMKLNPTP 539 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D Q +I +WMPV+F F L++FPAGL+IYW+W+N +S++QQ+ IM+ +G ++ L D ++ Sbjct: 540 PDPTQKIIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVIQQSYIMRRNGVKVELFDNVK 599 Query: 572 STFSKNYNSQ 581 STF + + + Sbjct: 600 STFRRKSSDK 609 >gi|170749903|ref|YP_001756163.1| 60 kDa inner membrane insertion protein [Methylobacterium radiotolerans JCM 2831] gi|254773004|sp|B1LTW1|OXAA_METRJ RecName: Full=Inner membrane protein oxaA gi|170656425|gb|ACB25480.1| 60 kDa inner membrane insertion protein [Methylobacterium radiotolerans JCM 2831] Length = 617 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 257/608 (42%), Positives = 367/608 (60%), Gaps = 35/608 (5%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNN-ERKNIQTVKQPNQVDNSYAAVLID----- 59 N FVAI LS++++ WQ F PR+E+ E +N +QP V Sbjct: 7 NMFVAIGLSLLVLLGWQYFVAGPRMEQQRQIEAQNKAAQQQPPGVTPDGVPSPSPKEGGP 66 Query: 60 ----------------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 R AL+ SPRV ++ P+L GSI LKG + DD++L+ YH + Sbjct: 67 AAPAPGTLPTAQGGPVSREAALARSPRVRIETPALSGSIALKGGRVDDVSLKNYHETIDP 126 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 SP + L SP+ T+ Y+AE +V AN LP ++T+W GK L+P P+ L + N Sbjct: 127 KSPEIVLFSPAGTETPYYAEFGWVG-ANAGPLPTNDTLWT-SDGKTLSPGMPVTLTWDNG 184 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 ++F+R I++D+ Y+F I D V N I P + R + + EG I Sbjct: 185 AGLVFKRIIAVDDKYMFTIRDEVENKGSGAITLYPYSLVSRWGKPHTQGYYVLHEGMIGY 244 Query: 224 LGDKSLVEQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQ 274 LG+ L E Y + K + ++GI+DKYWA+ IP ++T + Sbjct: 245 LGNDGLQEFTYDKLAKEGAYGGANTKGKAWTGVTGGFVGITDKYWAAAAIPDQDTPYTGA 304 Query: 275 FKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 F +DG YQA + + + G S T T LFAGAKE I++YEKDL I F+++ Sbjct: 305 FTDRTDGATNVYQASVRGDAVNLAAGASATATQRLFAGAKEVNVINNYEKDLGIKHFDLM 364 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 IDWGWF+FI KPMF + +FY+L GNFG++I++ T +KLLF P+A + YVS A MK +Q Sbjct: 365 IDWGWFFFITKPMFRALDFFYHLFGNFGVSILVVTFCLKLLFLPIANRSYVSMAKMKAVQ 424 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ +RE++K Q+A ++LYK INP+AGCWP+L+QIPVFFA+YKV+ I++EM Sbjct: 425 PEMAAIRERYKDD-RMKQQQATMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFITIEM 483 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 RHAPF+GWI+DLAA DPT+I LFG+LPF P F+H+G+WPIIM ++MF+QMKM+P P D Sbjct: 484 RHAPFFGWIRDLAAPDPTSIVNLFGLLPFPAPDFVHLGVWPIIMGITMFVQMKMNPAPPD 543 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 QA I +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D LRST Sbjct: 544 PVQAQIFTFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWDNLRST 603 Query: 574 FSKNYNSQ 581 F + ++ Sbjct: 604 FRRGNGTK 611 >gi|159184283|ref|NP_353415.2| putative inner membrane protein translocase component YidC [Agrobacterium tumefaciens str. C58] gi|38503098|sp|Q8UIB3|OXAA_AGRT5 RecName: Full=Inner membrane protein oxaA gi|159139609|gb|AAK86200.2| preprotein translocase 60 kD membrane subunit [Agrobacterium tumefaciens str. C58] Length = 599 Score = 635 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 282/596 (47%), Positives = 397/596 (66%), Gaps = 19/596 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME+N NYF+AIALSV+IV AWQ Y+ PRIE+ + Q +Q Q + A Sbjct: 1 MEKNRNYFIAIALSVVIVLAWQFLYMNPRIEQQRRAEEARQAQQQTTQQQPAPGAAPGAT 60 Query: 61 RAQA-----------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 A ++ + RV + ++ GSINL GA+FDD+ L+GYH V Sbjct: 61 VEGAPPASSTQAAATATREEAIARTQRVAIDTNAIAGSINLTGARFDDIRLKGYHETVDD 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +SPI+TL SP++TK+ YF EL YV+ +P TVW L SG LT TTP+ L + N+ Sbjct: 121 SSPIITLFSPADTKDGYFTELGYVAAQEVGGVPGPTTVWTLASGDKLTETTPVTLTYTNS 180 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 ++F RT+S+DEHY+ I D V N I F+ GR+ R+ F + EGF+ V Sbjct: 181 KGVVFSRTVSIDEHYMLSIADKVENPGQAAISFATYGRVTRNNKPVIPPVFVIHEGFLGV 240 Query: 224 LG-DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 G D SL E+KY D+E+ ++ + WLGI+DKYWA+ +P + T F +++ +++ Sbjct: 241 SGKDGSLTEKKYKDVEEEPVTVAKATGGWLGITDKYWAAAIVPPQTTPFETRYSHITGNQ 300 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQA F ++ +T+ G+SI + +FAGAKE P + YE + ++P+F++LIDWGWFYFI Sbjct: 301 PSYQADFKSDSMTVEAGQSIELKSLVFAGAKEVPLVDRYETEYSVPKFDLLIDWGWFYFI 360 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KPMF +M +F+ GNFG+AI+LTT+ VK LFFPLA KQY S ANMK +QPK++EL+ K Sbjct: 361 TKPMFKMMDFFFRYFGNFGVAILLTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAK 420 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +Q+AM+QLYK INP+AGCWP+LLQIPVFFA+YKVI +++EMRHAPF+GWI Sbjct: 421 HGDD-RMAMQQAMMQLYKEEKINPVAGCWPMLLQIPVFFALYKVIYVTIEMRHAPFFGWI 479 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+A DPT++F LFG+LP+ +P F+ +G+WP++M ++MF+QM+M+P P D QAMI W Sbjct: 480 HDLSAPDPTSLFNLFGLLPYDVPHFLMIGVWPLVMGITMFLQMRMNPTPPDPTQAMIFTW 539 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 MP++F F L+SFPAGL+IYW+W+N +SI QQA+IMK HGA+I L D ++ F + Sbjct: 540 MPLIFTFMLASFPAGLVIYWAWNNTLSISQQALIMKRHGAKIELFDNIKGLFKRKP 595 >gi|222147367|ref|YP_002548324.1| putative inner membrane protein translocase component YidC [Agrobacterium vitis S4] gi|254772742|sp|B9JZK8|OXAA_AGRVS RecName: Full=Inner membrane protein oxaA gi|221734357|gb|ACM35320.1| inner membrane insertion protein [Agrobacterium vitis S4] Length = 620 Score = 635 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 292/615 (47%), Positives = 393/615 (63%), Gaps = 39/615 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM-------------NNERKNIQTVKQPN 47 ME N NY +AIALSV++V WQ FY+ PRIE + Sbjct: 2 MENNRNYLIAIALSVMVVLGWQFFYMNPRIEAQRQAEQAQQAQQAKTPATQATPGAAVNG 61 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + A R A++ S RVE+ +L GSINL GA+ DDL L+GYH V SPI Sbjct: 62 ALPGQTQASATTSREDAVAKSARVEINTEALSGSINLTGARLDDLRLKGYHETVDKTSPI 121 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 +TLL+P++TK+ YFAE+ ++ + +P +TVW + G+ LT TTP+ L + N + Sbjct: 122 ITLLNPADTKDGYFAEIGFIGGEKSGSVPGPSTVWTVKDGQTLTETTPVTLTYTNETGLT 181 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 F R IS+D+HY+F I DTV N I +P GR+ R+ +T+ + EGFI V+G Sbjct: 182 FSRKISVDKHYMFTIEDTVANAGGADISLAPYGRVTRYNKPAVASTYVLHEGFIGVMGSG 241 Query: 228 S----LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 VE KY+ IEK + +N + WLGI+DKYWA+ +P + ++ S+F + +DG A Sbjct: 242 DGKFASVEAKYAAIEKENETNAKATGGWLGITDKYWAATLVPPQSLAYDSRFSHFTDGQA 301 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD------------------- 324 R+QA + + +TI PG+S T LFAGAKE P + Y D Sbjct: 302 RFQADYKNDPVTIAPGQSTTLKTLLFAGAKEVPVVDGYALDKSWFGQAFTNLFAGAKDTV 361 Query: 325 --LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 IPRF++LIDWGWFYF+ KPMF LM +F+ VGNFG+AI+LTT+ VKLLFFPLA KQ Sbjct: 362 QQYDIPRFDLLIDWGWFYFLTKPMFKLMDFFFRQVGNFGVAILLTTIAVKLLFFPLASKQ 421 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y S ANMK +QPK++EL+ K LQ+AM++LYKT INP+AGCWP+LLQIPVFFA Sbjct: 422 YASMANMKRMQPKMEELKAKHGDD-RMALQQAMMELYKTEKINPVAGCWPLLLQIPVFFA 480 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +YKVI I++EMRHAPF+GWI DL+A DPT+ LFG+LPF P +H+GIWPIIM ++MF Sbjct: 481 LYKVIYITIEMRHAPFFGWIHDLSAPDPTSFVNLFGLLPFESPAMLHLGIWPIIMGITMF 540 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +QM+M+P P D QAM+ NWMP+VF F L SFPAGL+IYW+W+N +S++QQ++IMK HG Sbjct: 541 VQMRMNPTPPDPTQAMLFNWMPLVFTFMLGSFPAGLVIYWAWNNTLSVLQQSIIMKRHGV 600 Query: 563 EIGLIDRLRSTFSKN 577 +I L D L+ F + Sbjct: 601 KIELFDNLKGLFQRK 615 >gi|118589754|ref|ZP_01547159.1| putative inner membrane protein translocase component YidC [Stappia aggregata IAM 12614] gi|118437840|gb|EAV44476.1| putative inner membrane protein translocase component YidC [Stappia aggregata IAM 12614] Length = 606 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 257/601 (42%), Positives = 371/601 (61%), Gaps = 24/601 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM------------------NNERKNIQTV 43 N N +AI LS+I++ WQ F P++E N K T Sbjct: 3 SENRNTILAIVLSLIVLLGWQYFVAAPQLERQQAELQAQQEAAQQTATDSANPSKPQPTG 62 Query: 44 KQ--PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 Q + + +R AL+ S RV + PSL GS+NLKG + DD+ L+ YH V Sbjct: 63 SQGANTAAPAAGQQMAFANREAALAASQRVTIDTPSLEGSVNLKGGRLDDIRLKDYHETV 122 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 + +SP + L SPS + Y+A+ +V N+ LP +TVW++ LTP+TP+ L + Sbjct: 123 NKSSPTIVLFSPSGSPKPYYADYGWVGDPGTNLALPGPDTVWSVDGEATLTPSTPLTLSW 182 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 N ++F+RT S+D++Y+F + +V N D + P G I R + + EG Sbjct: 183 DNGAGLIFKRTFSVDDNYMFTVNQSVENTGSDAVTLYPYGLIARKGMPETNGIYILHEGL 242 Query: 221 IAVLGDKSLVEQKYSDI-EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + V G + L E Y D+ E+SSI WLGI+DKYWA+ IP+ F F + + Sbjct: 243 LGVFGAEGLKEVDYDDLVEESSIRPSKVDQGWLGITDKYWAATLIPTPGQEFQPGFSHSA 302 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 +QA + N +T+ G + T+++LFAGAKE + YE+ L+I RFE+LIDWGWF Sbjct: 303 T-TDVFQADYLGNGVTVAGGSTGETSSYLFAGAKETKLLDGYEEALSIERFELLIDWGWF 361 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YF+ KPMF + YF++L GNFG+AI++ TV VKL+FFPLA K YVS + MK +QP++ E+ Sbjct: 362 YFLTKPMFFAIDYFFHLFGNFGVAILVVTVIVKLIFFPLANKSYVSMSKMKLVQPQMTEI 421 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 REK+ Q Q+A+++LYK INPLAGC PI++QIPVFF++YKV+ +++EMRHAPF+ Sbjct: 422 REKYSDD-RQKQQQALMELYKKEKINPLAGCLPIVVQIPVFFSLYKVLYVTIEMRHAPFF 480 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 GWI+DL+A DPT +F LFG++P+ P + +G+WP+IM ++MFIQMKM+P P D Q MI Sbjct: 481 GWIQDLSAPDPTTLFNLFGLIPWDPPQMLMLGVWPLIMGITMFIQMKMNPAPPDPTQQMI 540 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 WMPV+F F L+SFPAGL+IYW+W+N +S+ QQ VIM+ GA++ L D L S F + Sbjct: 541 FTWMPVIFTFMLASFPAGLVIYWAWNNTLSVTQQYVIMRRQGAKVELWDNLGSLFKRKKA 600 Query: 580 S 580 + Sbjct: 601 A 601 >gi|13474029|ref|NP_105597.1| putative inner membrane protein translocase component YidC [Mesorhizobium loti MAFF303099] gi|38503148|sp|Q98D88|OXAA_RHILO RecName: Full=Inner membrane protein oxaA gi|14024781|dbj|BAB51383.1| mlr4812 [Mesorhizobium loti MAFF303099] Length = 603 Score = 634 bits (1635), Expect = e-179, Method: Composition-based stats. Identities = 273/601 (45%), Positives = 375/601 (62%), Gaps = 23/601 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----------ERKNIQTVKQPNQVD 50 ME N N+F+ IALSV+I+ WQ FYV PR E E+K P Sbjct: 1 MENNRNFFITIALSVLILAVWQYFYVLPRSEAQREAARVEQQRVEEQKKAAEAANPGAGT 60 Query: 51 NSYAA-----------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 + A V + R QAL+ S RV++ PSL GSINL GA+ DDL L+ Y Sbjct: 61 PAPAPGTIPNAPGGDTVTVAGRDQALAASKRVKIDTPSLEGSINLTGARLDDLKLKHYTE 120 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 V NSP + LL+P YFAE+ +V +P + TVWN+ L+P+TP+ L Sbjct: 121 TVDKNSPEIELLNPQALPTGYFAEIGFVGNDKTGAVPGAETVWNVDGNPTLSPSTPVTLT 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N + F+RT S+D +Y+F + DTV N+ + GR+ R+ +T+ + EG Sbjct: 181 YTNDKGLTFKRTFSVDANYMFTVSDTVQNSGSSAVSLFNYGRVTRYDKPAVASTYVLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 I G + L E KY+ IEK ++ WLGI+DKYWA +P+++ F ++ + Sbjct: 241 LIGFTGTEGLQEHKYASIEKDKQYQPGKATDGWLGITDKYWAVTLVPTEKQPFQPRYAFF 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 DG RYQ+ F + I + G+S T +FAGAKE I+ Y +D I RF++LIDWGW Sbjct: 301 EDGRHRYQSDFLTDAINVEAGQSATVETEVFAGAKEVAKINAYAEDRHIKRFDLLIDWGW 360 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+FI KPMF L+ Y +GNFG+AI+ TTV VK LFFPLA K Y S ANMK +QPK+ E Sbjct: 361 FHFITKPMFWLIDTLYKFLGNFGLAILATTVIVKALFFPLANKSYASMANMKKVQPKMLE 420 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+ Q+AM++LYKT INPLAGCWP+ LQIPVFF++YKV+ I++EMRHAPF Sbjct: 421 IREKYADDK-MKQQQAMMELYKTEKINPLAGCWPVALQIPVFFSLYKVLYITIEMRHAPF 479 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI+DLAA DPT++F LFG++P LP + +G+WP+IM ++MF+QM+M+P P D QA Sbjct: 480 FGWIQDLAAPDPTSLFNLFGLIPVTLPHMLMIGVWPLIMGVTMFLQMRMNPTPPDPTQAA 539 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I WMPV+F F ++ FPAGL+IYW+W+N++SI+QQ VIMK GA+I L D L + F K Sbjct: 540 IFTWMPVIFTFMMAGFPAGLVIYWAWNNMLSILQQGVIMKRQGAKIELWDNLMALFKKKP 599 Query: 579 N 579 + Sbjct: 600 S 600 >gi|85717142|ref|ZP_01048101.1| putative inner membrane protein translocase component YidC [Nitrobacter sp. Nb-311A] gi|85696033|gb|EAQ33932.1| putative inner membrane protein translocase component YidC [Nitrobacter sp. Nb-311A] Length = 614 Score = 633 bits (1634), Expect = e-179, Method: Composition-based stats. Identities = 241/608 (39%), Positives = 363/608 (59%), Gaps = 29/608 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI-----------QTVKQPNQV 49 M N N +AI LS +++ AWQ FY P++E+ ++ + Sbjct: 1 MSENRNTIIAIVLSALVLIAWQYFYNIPQMEKDRAAQQAQSELAKSQKESSEAAPNSPTP 60 Query: 50 DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 A + R A++ PRV++ P L GS++L GA+ DDL L Y V SP + Sbjct: 61 GQPAAKSAVVARDVAIASKPRVKIHTPRLSGSLSLTGARIDDLLLTKYRETVDPASPAIE 120 Query: 110 LLSPSNTKNAYFAELDYV-STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L SPS T N Y+AE +V +T + + +P+ +T W LT +TP+ L + N + F Sbjct: 121 LFSPSGTANPYYAEFGWVPATGSTVRVPDRDTPWQQEGSGALTESTPVTLKYDNGEGLTF 180 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 RTIS+D+ YLF I D V+N + P I RH + + + EG I LGD+ Sbjct: 181 RRTISVDDQYLFTIKDEVSNTGSAPVTLYPFALISRHGTPQVSGYYILHEGLIGYLGDQK 240 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQA 287 L E Y I+++ +F +N WLGI+DKYWA+ +P ++F G + YQ Sbjct: 241 LQEYSYKKIDEAKSVSFDVTNGWLGITDKYWAAALLPDTSARLQARFSSDQAGSVKTYQT 300 Query: 288 KFSANEITILPGKSITTTNFLFAGAKE---------FPTIHHYEKDLAIPRFEMLIDWGW 338 + + TI G + + + LFAGAKE + Y K L + F++LIDWGW Sbjct: 301 DYLEDARTIPAGGTGSLSTRLFAGAKEAGVVGLNFPLVELGGYNKQLGLNHFDLLIDWGW 360 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FYFI KPMF+ + +F+++ GNFG+AI++ TV +KL+FFPLA + Y S A MK +QP+I Sbjct: 361 FYFITKPMFLALDFFFHVFGNFGVAILVVTVLIKLVFFPLANRSYASMAKMKAVQPQITA 420 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+E++ LQ+ M+++YK INP++GC P+LLQIPVFF++YKV+ +++EMRHAPF Sbjct: 421 LKEQYPDD-RMKLQQEMMEIYKKEKINPISGCLPMLLQIPVFFSLYKVLFVTIEMRHAPF 479 Query: 459 WGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + WIKDL+A DPT+IF LFG+LP+ L ++ +G WPIIM ++M+ QMK++P P Sbjct: 480 FAWIKDLSAPDPTHIFNLFGLLPYDPSVVPLLGPYLAIGAWPIIMGITMWFQMKLNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D Q +I +WMPV+F F L++FPAGL+IYW+W+N +S++QQ+ IM+ +G ++ L D ++S Sbjct: 540 DPTQKIIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVIQQSYIMRRNGVKVELFDNVKS 599 Query: 573 TFSKNYNS 580 TF + + Sbjct: 600 TFRRKPSD 607 >gi|307943178|ref|ZP_07658523.1| inner membrane protein OxaA [Roseibium sp. TrichSKD4] gi|307773974|gb|EFO33190.1| inner membrane protein OxaA [Roseibium sp. TrichSKD4] Length = 603 Score = 633 bits (1634), Expect = e-179, Method: Composition-based stats. Identities = 247/596 (41%), Positives = 361/596 (60%), Gaps = 21/596 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEE-----------------MNNERKNIQTVK 44 N N +AIALS+ ++ AWQ F P++E+ Sbjct: 3 SENRNTLLAIALSLAVLLAWQYFVAQPQLEKQQAALQAQQAAEQAQSDPQRPSAQNAPGA 62 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 ++ R QA++ S RV L P L GS+NL G + DD+ L+ YH V + Sbjct: 63 ATTGAPSASGQEQFQTREQAIAASERVTLDTPRLSGSVNLVGGRIDDIRLKDYHETVDKS 122 Query: 105 SPIVTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 SP V L SP + ++A+ +VS ++ LP ++TVW+ +G LTP TP+ L F N Sbjct: 123 SPTVVLFSPKGSPEPFYADYGWVSDPGADVALPGADTVWSAPAGAQLTPNTPLTLTFDNG 182 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + F+RT S+DE+Y+F + +V N+ + + P G + R TN + + EG + V Sbjct: 183 GGLTFKRTFSIDENYMFSVTQSVENSGSEAVTLYPYGLLARTGQPETTNFYILHEGLLGV 242 Query: 224 LGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 G++ L E Y D+ ++ + WLGI+DKYWA+ +P +F F + S+ Sbjct: 243 FGEEGLKEVDYDDLAETGVDRPGKVDRGWLGITDKYWAATLVPEPGQTFQPSFTH-SNVT 301 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQA F + + I G + ++LFAGAKE + YE L I +FE+LIDWGWFYF+ Sbjct: 302 DNYQADFLGSAVVIAAGSTSEANSYLFAGAKETKLLDSYEATLNIEQFELLIDWGWFYFL 361 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KPMF + + + + GNFG+AI+L TV +KL+FFPLA K YVS + MK +QP++ E+R++ Sbjct: 362 TKPMFFAIDWLFMMFGNFGVAILLVTVAIKLVFFPLANKSYVSMSKMKLVQPQMQEIRDR 421 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + + Q+A+++LYK INPLAGC PIL+QIPVFFA+YKV+ +++EMRHAPF+GWI Sbjct: 422 YGDDKAK-QQQALMELYKKEKINPLAGCLPILIQIPVFFALYKVLFVTIEMRHAPFFGWI 480 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 +DL+A DPT IF LFG++P+ P + VGIWP++M ++MF+QMKM+P P D Q MI W Sbjct: 481 QDLSAPDPTTIFNLFGMIPWDPPQLLTVGIWPLLMGITMFVQMKMNPAPPDPTQQMIFTW 540 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 MP++F F L+SFPAGL+IYW+W+N +SI QQ VIM G ++ L D L+STF + Sbjct: 541 MPIIFTFMLASFPAGLVIYWAWNNFLSIAQQWVIMSRQGVKVELFDNLKSTFKRKP 596 >gi|220925223|ref|YP_002500525.1| YidC translocase/secretase [Methylobacterium nodulans ORS 2060] gi|254773002|sp|B8IMM9|OXAA_METNO RecName: Full=Inner membrane protein oxaA gi|219949830|gb|ACL60222.1| YidC translocase/secretase [Methylobacterium nodulans ORS 2060] Length = 605 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 243/594 (40%), Positives = 361/594 (60%), Gaps = 25/594 (4%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA----------- 54 N +AIALS+ ++ W F P++E ++ P + S Sbjct: 7 NMIIAIALSLAVLLGWNYFVAAPQVERQRQQQAQTSASPSPKEGGPSAPVPGTLPGASGG 66 Query: 55 -AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 R +AL+ SPRV + +L GS+ LKG + DD+ L+GYH V SP + LLSP Sbjct: 67 NPQAALTREEALARSPRVRIDTEALKGSVALKGGRIDDVALKGYHETVDPKSPEIVLLSP 126 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + + N Y+AE +V LPN +TVW G +LT P+ L + N ++F RT+S Sbjct: 127 AGSANPYYAEFGWVGQGAGP-LPNGDTVWT-ADGDLLTAKKPLTLTWDNGAGLVFRRTLS 184 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 +D+ Y+F + D+V N + P G + R + + EG I VLGDK L E Sbjct: 185 VDDKYMFTVEDSVENKGQSAVTLYPYGLVSRWGKPHTQGYYVLHEGLIGVLGDKGLQEYT 244 Query: 234 YSDIEKSS---------ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 Y + K + +S + +LGI+DKYWA+ IP ++T + F +G + Sbjct: 245 YDKMAKENPLGSPGTRGLSWPGVTGGFLGITDKYWAAATIPDQKTPYTGSFTERDEGATK 304 Query: 285 -YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 YQ T+ PG + + LFAGAKE TI Y + L I +F+++IDWGWFYFI Sbjct: 305 VYQTSSLGEARTLAPGAGVQASQHLFAGAKEVSTIDAYRQKLDIKQFDLMIDWGWFYFIT 364 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KPMF + +FY L GNFG++I++ T+ +KL F P+A + YVS A MK +QP++ +RE++ Sbjct: 365 KPMFKALDFFYKLFGNFGVSILVVTLILKLFFLPIANRSYVSMAKMKAVQPEMTAIRERY 424 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 + Q+AM++LY+ INP+AGCWP+++QIPVFFA+YKV+ +++EMRHAPF+GWI+ Sbjct: 425 ADDKVK-QQQAMMELYRKEKINPVAGCWPVVIQIPVFFALYKVLFVTIEMRHAPFFGWIR 483 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DLAA DPT++ LFG+LPF P +H+G+WPI+M ++MF+QMKM+P P D QA + +M Sbjct: 484 DLAAPDPTSVLNLFGLLPFAAPDLVHLGVWPIVMGITMFLQMKMNPAPPDPVQAQVFTFM 543 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 P++F F L SFPAGL+IYW+W+N++SI+QQ IM+ +G ++ L D LR+TFS++ Sbjct: 544 PIIFTFMLGSFPAGLVIYWAWNNLLSILQQYWIMRRNGVKVELWDNLRTTFSRS 597 >gi|298290371|ref|YP_003692310.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Starkeya novella DSM 506] gi|296926882|gb|ADH87691.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Starkeya novella DSM 506] Length = 609 Score = 630 bits (1625), Expect = e-178, Method: Composition-based stats. Identities = 242/605 (40%), Positives = 362/605 (59%), Gaps = 27/605 (4%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEE------------------MNNERKNIQTVK 44 N N +AI LS+ ++ AWQ F P++E+ + E Sbjct: 4 ENRNMIIAIVLSMAVLIAWQYFSGIPQMEQQRQQHAAQQQAAQQQAAQPSGEAGTAAPAP 63 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + + A RA+AL+ SPR + P +IGS+ LKG + DDL+L+ Y V N Sbjct: 64 GTSAPAPAGTAPKALTRAEALARSPRAVIDTPRVIGSVALKGGRIDDLSLKDYRETVDPN 123 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 SPI+ LLSPS N ++AE +V A ++++PN+ T+W G LT P+ L + N Sbjct: 124 SPIIVLLSPSGGPNPFYAEFGWVPGAGASVQVPNAETLWTAPEGAKLTHEAPLVLSWDNG 183 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 ++F RT+S+D +Y+F +VD V N + + P G + RH + + EG I V Sbjct: 184 AGLIFRRTLSIDANYMFHVVDEVENTTAAPVALHPYGLVSRHGTPHVLGYYILHEGLIGV 243 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + L E KY DI + F WLGI+DKYWA+ IP + ++F G+ Sbjct: 244 TSEAGLHEIKYKDIAERKTETFPSVGGWLGITDKYWAATVIPGIQEKVQARFSAAQAGND 303 Query: 284 -RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQ F + +++ PG +T LFAGAKE + Y+ I RF++LIDWGWFYFI Sbjct: 304 FSYQTDFLGDAVSVAPGAKASTEGRLFAGAKEVRVVDGYQSTYNIDRFDLLIDWGWFYFI 363 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F+++ + Y VGNFG+AI++ TV +K++FFPLA K Y S A MK +QP+I LRE+ Sbjct: 364 TKPLFLVIDWIYKGVGNFGVAILIVTVMLKIVFFPLANKSYASMAKMKAVQPEITALRER 423 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + + LQ+ M+++YK INP+AGC PI++QIPVFFA+YKV+ +++EMRHAPF+GWI Sbjct: 424 YGDDRVK-LQQEMMEIYKKEKINPVAGCLPIVIQIPVFFALYKVLFVTIEMRHAPFFGWI 482 Query: 463 KDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 KDL+A DPT IF LFG++P+ + F+ +G+WPIIM ++M+ QMK++P P D Q Sbjct: 483 KDLSAPDPTTIFNLFGLIPWDPGQVPVIGHFLLLGVWPIIMGITMWAQMKLNPAPPDPTQ 542 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 I +WMP++F F L SF +GL+IYW+W+N +S++QQ++IM+ +G +I L D ++ F + Sbjct: 543 KAIFDWMPLIFTFMLGSFASGLVIYWAWNNTLSVIQQSIIMRRNGVKIELWDNVKELFGR 602 Query: 577 NYNSQ 581 + Sbjct: 603 KKKPK 607 >gi|254502069|ref|ZP_05114220.1| 60Kd inner membrane protein [Labrenzia alexandrii DFL-11] gi|222438140|gb|EEE44819.1| 60Kd inner membrane protein [Labrenzia alexandrii DFL-11] Length = 608 Score = 630 bits (1625), Expect = e-178, Method: Composition-based stats. Identities = 257/603 (42%), Positives = 368/603 (61%), Gaps = 26/603 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM----------------------NNERKN 39 N N +AI LS+I++ AWQ FY P++E + Sbjct: 3 SENRNTILAIVLSLIVLLAWQYFYAGPQLERQQAALQAQQEAEAAQQSAPGGVNPDAPTP 62 Query: 40 IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 ++ + R QALS + RV + P L GSINL G + DDL L+ YH Sbjct: 63 SVAGSGTTVAPSATSPQGFASREQALSATQRVVIDTPRLEGSINLTGGRLDDLRLKDYHE 122 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKL 158 V +SP + L SP+ + N Y+++ +V+ A +I LP +T+W++ LTP+TP+ L Sbjct: 123 TVDRSSPTIVLFSPTGSPNPYYSDYGWVADAGASITLPGPDTIWSVNGSSDLTPSTPLTL 182 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 + N ++F RT S+DE+Y+F + +VTNNS D + P G I R T + + E Sbjct: 183 SWDNGEGLVFNRTFSVDENYMFDVTQSVTNNSGDVVTLYPYGLIARKGIPETTGIWILHE 242 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKY 277 G + V G++ LVE YSD+E+ + WLGI+DKYWA+ IP+ F F Y Sbjct: 243 GLLGVFGEEGLVEVDYSDLEEDGPVRPAAVDRGWLGITDKYWAATLIPTPGQEFQPGFSY 302 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + +QA + N + + G T+++LFAGAKE + YE L+I RFE+LIDWG Sbjct: 303 AAQ-SGNFQADYLGNAVVVPAGGVGETSSYLFAGAKETNLLDAYEASLSIERFELLIDWG 361 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WFYF+ KPMF + + ++ GNFG+AI+L TV +KL FFPLA K YVS + MK +QP++ Sbjct: 362 WFYFLTKPMFYAIDFLFHYFGNFGVAILLVTVIIKLFFFPLANKSYVSMSKMKLVQPQMT 421 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+REK+ Q Q+A+++LYK INPLAGC PIL+QIPVFFA+YKV+ +++EMRHAP Sbjct: 422 EIREKYADD-RQKQQQALMELYKKEKINPLAGCLPILIQIPVFFALYKVLFVTIEMRHAP 480 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F+GWI+DL+A DPT++F LFG++P+ P + +G+WP+IM ++MF+QMKM+P P D Q Sbjct: 481 FFGWIQDLSAPDPTSLFNLFGLIPWDPPQLLMLGVWPLIMGITMFVQMKMNPAPPDPTQQ 540 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MI WMPVVF F L+SFPAGL+IYW+W+N +SI QQ VIM G ++ L D + S F + Sbjct: 541 MIFTWMPVVFTFMLASFPAGLVIYWAWNNSLSIAQQWVIMSRQGVKVELWDNIGSMFKRK 600 Query: 578 YNS 580 + Sbjct: 601 KPA 603 >gi|163757863|ref|ZP_02164952.1| putative inner membrane protein translocase component YidC [Hoeflea phototrophica DFL-43] gi|162285365|gb|EDQ35647.1| putative inner membrane protein translocase component YidC [Hoeflea phototrophica DFL-43] Length = 605 Score = 630 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 271/604 (44%), Positives = 380/604 (62%), Gaps = 26/604 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN-------------ERKNIQTVKQPN 47 ME N NYFVAI LSV+++ WQ YV P+IE P Sbjct: 1 METNRNYFVAILLSVLVLIGWQYLYVSPKIEREREAAQALQAEQAATQPGATGAGTTTPG 60 Query: 48 QVDNSY-----------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 V S A R AL+ S R+ + P+L GSINL GA+ DDL L Sbjct: 61 AVSGSAPGGETAMPGVVAPETGLSREDALAQSERIAIDTPALSGSINLTGARIDDLLLSE 120 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 Y + SP + L SP+ + YFAE+ +++ A++ P +TVW+ G+ LT +P+ Sbjct: 121 YRETIDPESPNIRLFSPAQQADGYFAEVGFIADADSGPAPGPDTVWSAAPGQTLTQGSPV 180 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + N +LF R IS+D+H+LF+ DT++N+S + GR+ R + + Sbjct: 181 TLTYDNGAGLLFTRKISVDDHFLFQFEDTISNSSSQTASVAGYGRVTRFFRPQTAGIYVL 240 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSI-SNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 EG I V+G++ L E YSD+E++ I + + W+GI+DKYWA+ +P + F ++F Sbjct: 241 HEGLIGVIGEEGLQEIDYSDVEETPILAQPKATAGWMGITDKYWAAALVPPQGAGFDTRF 300 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + +DG ARYQA F + I G S+T+T +FAGAKE P I YE I F+++ID Sbjct: 301 AHFTDGRARYQADFRTDAQAIAAGGSVTSTTLVFAGAKEVPIIEGYESQFNILNFDLMID 360 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWFYFI KPMF ++ + + L+GNFG+AI+ TTV VKL+FFPLA K YVS ANMK +QPK Sbjct: 361 WGWFYFITKPMFWMIDFLFKLLGNFGLAILATTVIVKLIFFPLANKSYVSMANMKKVQPK 420 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 ++EL+ K LQ+ M++LYK INP+AGCWP+LLQIPVFFA+YKV+ +++EMRH Sbjct: 421 LEELKAKHGDD-RMALQQGMMELYKKEKINPVAGCWPVLLQIPVFFALYKVLYVTIEMRH 479 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 APF+GWI+DL+A DPT++F LFG+LP+ +PGF+ +G+WP+IM ++MF+QM+M+P P D Sbjct: 480 APFFGWIQDLSAPDPTSLFNLFGLLPYDVPGFLLIGVWPLIMGITMFLQMRMNPTPPDPT 539 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 QAMI WMPVVF F L++FPAGL+IYW+W+N +SI+QQ IMK GA+I L D L + F Sbjct: 540 QAMIFTWMPVVFTFMLATFPAGLVIYWAWNNTLSILQQGFIMKRQGAKIELWDNLMALFK 599 Query: 576 KNYN 579 Sbjct: 600 PKDK 603 >gi|188581560|ref|YP_001925005.1| 60 kDa inner membrane insertion protein [Methylobacterium populi BJ001] gi|254773003|sp|B1Z8E7|OXAA_METPB RecName: Full=Inner membrane protein oxaA gi|179345058|gb|ACB80470.1| 60 kDa inner membrane insertion protein [Methylobacterium populi BJ001] Length = 614 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 254/606 (41%), Positives = 366/606 (60%), Gaps = 34/606 (5%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-RKNIQTVKQPNQVD-------------- 50 N FVAIALS++++ W F P E + P D Sbjct: 7 NMFVAIALSLVVLLGWHYFVTGPASERQRQAVQSQTAQNTAPQSADGIPSPSPREGSPNA 66 Query: 51 ------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 AA R AL+ S RV + P+L GSI LKGA+ DD++L+ YH VS Sbjct: 67 PVPGTVPGAAAQGPISREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHETVSDE 126 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SP + LLSP+ + N Y+AE +V AN LPN +T+W G +L P P+ L + N Sbjct: 127 SPRIVLLSPAGSANPYYAEFGWVG-ANAGPLPNGDTLWK-ADGDLLAPGKPLTLTWDNGQ 184 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 +LF+R +++D+ ++F + D V N+S + + P + R + + EG I VL Sbjct: 185 GLLFKRIVAVDDKFMFTVRDEVENSSANPVTLYPYSLVSRWGKPQTQGYYVLHEGLIGVL 244 Query: 225 GDKSLVEQKYSDIEKSSI---------SNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G L E Y + K + + + W+GI+DKYWA+ IP ++ F F Sbjct: 245 GSDGLQEYTYDKVGKEPAYGGAATQGKAWSNVTGGWVGITDKYWAAAAIPDQDKPFTGAF 304 Query: 276 KYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 +DG + YQ + +T+ P S TT LFAGAKE I+ YE+DL I +F+++I Sbjct: 305 TERTDGATKIYQTSVRGDAVTVAPSASSATTQRLFAGAKEVNQINAYERDLGIKQFDLMI 364 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 DWGWF+F+ KPMF + +FY+L+GNFG++I+L T+ +K+ F P+A + YVS A MK +QP Sbjct: 365 DWGWFWFLTKPMFRALDFFYHLLGNFGVSILLVTLILKIFFLPIANRSYVSMAKMKAVQP 424 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 ++ +RE++K + Q+AM++LYK INP+AGCWP+L+QIPVFFA+YKV+ I++EMR Sbjct: 425 EMTSIRERYKDDRTK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFITIEMR 483 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 HAPF+GWI DLAA DPT+I LFG+LPF P F+H+G+WPIIM ++MFIQMKM+P P D Sbjct: 484 HAPFFGWIHDLAAPDPTSIMNLFGLLPFAAPDFIHLGVWPIIMGITMFIQMKMNPAPPDP 543 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 QA + +MP+VF F L SFPAGL+IYW+W+N +S++QQ +IM+ +G ++ L D LR F Sbjct: 544 VQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYIIMRRNGVKVELWDNLRGMF 603 Query: 575 SKNYNS 580 + S Sbjct: 604 KRGNKS 609 >gi|110632737|ref|YP_672945.1| putative inner membrane protein translocase component YidC [Mesorhizobium sp. BNC1] gi|110283721|gb|ABG61780.1| protein translocase subunit yidC [Chelativorans sp. BNC1] Length = 609 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 271/607 (44%), Positives = 368/607 (60%), Gaps = 29/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT---------------VKQ 45 ME N N + IALSV+I+ WQ FYV PR++ + + Sbjct: 1 MENNRNLLITIALSVVILTLWQVFYVNPRVDAQREAAQIEAQRAQETEEKLGTQGADIPA 60 Query: 46 PNQVDNSYAAVLID------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 P S A R +AL+ + RV + P L G+INL GA+ DDL L+ Y + Sbjct: 61 PGATPGSTAVPGSAIPRTQVTRQEALAGAERVTIDTPRLAGTINLAGARLDDLLLKDYRV 120 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 V +SP + LL P+ YF E+ Y A+ +P +TVW L G L+P +P+ L Sbjct: 121 TVDKDSPNIDLLGPAGLPEGYFVEVGYTGNASTGAVPGPDTVWQLQEGSTLSPGSPVTLS 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 F N + F RT ++DE+YLF I DT+ N + + + GR R + + EG Sbjct: 181 FTNDRGLTFLRTFAVDENYLFTITDTIRNAAGEPVEIRNYGRTTRFGQPKTAGIYILHEG 240 Query: 220 FIAVLGDKSLVEQKYSDI-EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 FI VLG++ L E YS E + ++ WLGI+DKYWA +P + F +F Y Sbjct: 241 FIGVLGEEGLREVDYSTAQEDGQVLPGKSADGWLGITDKYWAVTMVPRAQKDFEPRFAYF 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 SDG RYQA + + +T+ PG +FAGAKE + YE I +FE+LIDWGW Sbjct: 301 SDGRERYQADYLTDPVTVAPGGEAKIETLVFAGAKEVHVVDAYETQHNIRQFELLIDWGW 360 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FYFI KPMF L+ + + L+GNFG+AI+ TTVFVKL+FFPLA K Y S ANMK +QP + E Sbjct: 361 FYFITKPMFYLIDWLFRLLGNFGVAILATTVFVKLVFFPLANKSYKSMANMKKVQPALLE 420 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+ Q+AM++LYK INPLAGCWPIL+QIPVFFA+YKV+ +++EMRHAPF Sbjct: 421 IREKYADDK-MKQQQAMMELYKKEKINPLAGCWPILIQIPVFFALYKVLYVTIEMRHAPF 479 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPA 512 +GWI+DL+A DPT IF LFG+LPF F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 FGWIQDLSAPDPTTIFNLFGLLPFDPSQVPVFGPFLMLGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QAMI NWMPV+F F L++FPAGL+IYW+W+N++SI+QQ VIMK GA+I L D + + Sbjct: 540 DPTQAMIFNWMPVIFTFMLATFPAGLVIYWAWNNLLSIIQQGVIMKRQGAKIELWDNMVN 599 Query: 573 TFSKNYN 579 F + Sbjct: 600 LFRRKPK 606 >gi|92119160|ref|YP_578889.1| putative inner membrane protein translocase component YidC [Nitrobacter hamburgensis X14] gi|122416784|sp|Q1QH68|OXAA_NITHX RecName: Full=Inner membrane protein oxaA gi|91802054|gb|ABE64429.1| protein translocase subunit yidC [Nitrobacter hamburgensis X14] Length = 609 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 249/605 (41%), Positives = 369/605 (60%), Gaps = 25/605 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK------NIQTVKQPNQV-DNSY 53 M N N +AI LS +I+ AWQ FY P++E+ ++ T PN + Sbjct: 2 MSENRNTIIAIVLSGLILIAWQYFYNIPQMEKDRAAQQAQSQTAKSPTEPTPNSPKPDHP 61 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 AA + R A++ +PRV++ P L GSI+LKGA+ DDL L + V SP + L SP Sbjct: 62 AAESVVARGVAIATTPRVKIDTPRLSGSISLKGARIDDLLLTKFRETVDPASPAIELFSP 121 Query: 114 SNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 S T Y+AE +V+ T + +P+ NTVW LT +TP+ L + N + F RTI Sbjct: 122 SGTTTPYYAEFGWVAATGSTARVPDQNTVWQQEGSGALTQSTPVTLKYDNGEGLTFRRTI 181 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 ++D+HYLF I D VTN + P I RH + + + EG I LGD+ L E Sbjct: 182 AVDDHYLFTIKDEVTNAGGAPVTLYPFALISRHGTPAVSGYYILHEGLIGYLGDQKLQEY 241 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQAKFSA 291 Y I+++ +F +N WLGI+DKYWA+ +P ++F G + YQA + Sbjct: 242 SYKKIDEAKSVSFKVTNGWLGITDKYWAAALLPDTSAQLQARFSSNESGSVKTYQADYLE 301 Query: 292 NEITILPGKSITTTNFLFAGAKE---------FPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 + TI G + + LFAGAKE F + Y K L + F++LIDWGWFYFI Sbjct: 302 DAQTIPVGGTGSVNTRLFAGAKEAGVVGINFPFVELGGYNKQLGLNHFDLLIDWGWFYFI 361 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KPMF+ + +F+++ GNFGIAI+ TV +K +FFPLA + Y S A MK +QP+I L+E+ Sbjct: 362 TKPMFLALDFFFHVFGNFGIAILFVTVLIKAIFFPLANRSYASMAKMKAVQPQIAALKER 421 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 F LQ+ M+++YK INP++GC P++LQIPVFF++YKV+ +++EMRHAPF+ WI Sbjct: 422 FPDDK-MKLQQEMMEIYKKEKINPISGCLPMVLQIPVFFSLYKVLFVTIEMRHAPFFAWI 480 Query: 463 KDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 KDL+A DPT+IF LFG+LP+ L ++ +G WPIIM ++M+ QMK++P P D Q Sbjct: 481 KDLSAPDPTHIFNLFGLLPYDPSAVPLLGPYLAIGAWPIIMGITMWFQMKLNPTPPDPTQ 540 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +I +WMPV+F F L++FPAGL+IYW+W+N +S++QQ+ IM+ +G ++ L++ ++S F + Sbjct: 541 KLIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVIQQSYIMRRNGVKVELLNNVKSVFRR 600 Query: 577 NYNSQ 581 + + Sbjct: 601 KSSDK 605 >gi|260461161|ref|ZP_05809410.1| 60 kDa inner membrane insertion protein [Mesorhizobium opportunistum WSM2075] gi|259033195|gb|EEW34457.1| 60 kDa inner membrane insertion protein [Mesorhizobium opportunistum WSM2075] Length = 603 Score = 627 bits (1617), Expect = e-177, Method: Composition-based stats. Identities = 272/601 (45%), Positives = 381/601 (63%), Gaps = 23/601 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----ERKNIQTVKQPNQVDNSYA-- 54 ME N N+F+ IALSV+I+ WQ FY+ PR+E+ E++ ++ K+ + N A Sbjct: 1 MENNRNFFITIALSVLILTLWQVFYMNPRVEQQREAAKIEQQRVEEQKKAAEATNPGAAT 60 Query: 55 ---------------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 AV R QAL+ S RV++ PSL GSINL GA+ DDL L+ Y Sbjct: 61 PAPAPGTIPNAPGGDAVTAAGRDQALAASKRVKIDTPSLEGSINLTGARLDDLKLKHYTE 120 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 V NSP + LL+P YFAE+ +V +P S+TVW++ L+P+TP+ L Sbjct: 121 TVDKNSPEIELLNPQALPTGYFAEIGFVGNDKTGAVPGSDTVWSVEGNPTLSPSTPVTLT 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N + F+R S+D +Y+F + DTV N+ + GR+ R+ +T+ + EG Sbjct: 181 YTNDKGLTFKRVFSVDANYMFTVTDTVQNSGASAVSLFNYGRVTRYDKPAVASTYVLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIE-KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 I V G + L E KY+ IE + ++ ++ WLGI+DKYWA +P+++ F ++ + Sbjct: 241 LIGVTGTEGLAEYKYAKIESEKQVTPGKSTDGWLGITDKYWAVTLVPTEKQPFQPRYAFF 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 DG RYQ+ F + I + G+S T +FAGAKE I+ YE D I +F ++IDWGW Sbjct: 301 EDGRHRYQSDFLTDAINVDAGQSATVETEIFAGAKEVAKINAYEADRHIRQFNLVIDWGW 360 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FYFI KPMF L+ Y GNFG+AI+ TTV VK LFFPLA K Y S ANMK +QPK+ E Sbjct: 361 FYFITKPMFWLIDTLYKFFGNFGLAILATTVIVKALFFPLANKSYASMANMKKVQPKMLE 420 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+ Q+AM++LYKT INPLAGCWP+ LQIPVFF++YKV+ I++EMRHAPF Sbjct: 421 IREKYADDK-MKQQQAMMELYKTEKINPLAGCWPVALQIPVFFSLYKVLYITIEMRHAPF 479 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI+DLAA DPT+IF LFG++P LP + +G+WP+IM ++MF+QM+M+P P D QA Sbjct: 480 FGWIQDLAAPDPTSIFNLFGLVPVTLPHMLMIGVWPLIMGVTMFLQMRMNPTPPDPTQAA 539 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I WMPV+F F ++ FPAGL+IYW+W+N +SI+QQ +IMK GA+I L D L + F K Sbjct: 540 IFTWMPVIFTFMMAGFPAGLVIYWAWNNTLSILQQGLIMKRQGAKIELWDNLVALFRKKP 599 Query: 579 N 579 + Sbjct: 600 S 600 >gi|316932100|ref|YP_004107082.1| membrane protein insertase [Rhodopseudomonas palustris DX-1] gi|315599814|gb|ADU42349.1| membrane protein insertase, YidC/Oxa1 family [Rhodopseudomonas palustris DX-1] Length = 625 Score = 627 bits (1616), Expect = e-177, Method: Composition-based stats. Identities = 241/615 (39%), Positives = 351/615 (57%), Gaps = 46/615 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE---------------------------- 32 M N N +A+ LS +++ WQ F P++E+ Sbjct: 1 MSDNRNTILAVVLSGLVLLGWQYFINIPQMEKQRAAQQAQQAQQQPQTTSPGTAPSGTPS 60 Query: 33 MNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 P+ + AA R AL+ +PR++++ L GSI LKGA+ DDL Sbjct: 61 ATPAPGTPSAPGAPSPANPQAAATPTVSREAALAATPRIKVETTQLSGSIALKGARIDDL 120 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILT 151 L Y V SP + L SPS + Y+AE +V A N++LP+ NTVW LT Sbjct: 121 ALTQYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGANVKLPDHNTVWTQEGSGALT 180 Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 P P+ L + N + F R I++D+ YLF + D VTN + P I RH Sbjct: 181 PANPVTLKWDNGEGLTFRRQIAVDDRYLFTVKDDVTNTGAAPVTLYPFALISRHGTPHVE 240 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + EG I LG+ L E YS I+++ F +N WLGI+DKYWAS +P Sbjct: 241 GYYILHEGLIGYLGEHGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDNTAQL 300 Query: 272 HSQFKYLSDGH-ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHY 321 ++F G+ YQ + + T+ G +++ LFAGAKE + Y Sbjct: 301 QARFSANKAGNVTTYQTDYLEDARTVPIGGTVSANARLFAGAKEARVVGINFPFAGLGGY 360 Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 ++ L + F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV +KL+F PLA K Sbjct: 361 DRQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLIKLIFLPLANK 420 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Y S A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC PILLQIPVFF Sbjct: 421 SYASMAKMKAIQPQLLALKERHPDDKVK-QQQEMMEIYRKEKINPVAGCLPILLQIPVFF 479 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPI 495 ++YKV+ +++EMRHAPF+GWI DL+AADPTN+F LFG++P+ L ++ +G WP+ Sbjct: 480 SLYKVLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLIPYDPTAIPVLGHYLVLGAWPL 539 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 +M +M+ QMK++P P D Q MI WMPV+F F L+ FPAGL+IYW+W+N++S++QQA Sbjct: 540 VMGFTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNLLSVIQQAY 599 Query: 556 IMKMHGAEIGLIDRL 570 IM+ +G ++ L D L Sbjct: 600 IMRRNGVKVELFDNL 614 >gi|158425677|ref|YP_001526969.1| putative inner membrane protein translocase component YidC [Azorhizobium caulinodans ORS 571] gi|158332566|dbj|BAF90051.1| 60 kDa inner membrane protein [Azorhizobium caulinodans ORS 571] Length = 607 Score = 624 bits (1610), Expect = e-176, Method: Composition-based stats. Identities = 247/607 (40%), Positives = 367/607 (60%), Gaps = 27/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY------- 53 M N N F+AI LS++I+ WQ F P+ E+ + Q + S Sbjct: 1 MTDNRNMFIAIGLSLVILIGWQYFIALPQAEKQRQIQAQQQAAQATQTPSPSAEAAQGGG 60 Query: 54 -----------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 A + RAQAL+ +PRV ++ PSL GSI+L+GA+ DDL L + V Sbjct: 61 AAPTAPGSTGVAGSRVMTRAQALAATPRVAIETPSLRGSISLRGARADDLTLSQFRETVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDY-VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 SP + LLSPS + ++AE + V+ N+ +P +T+W +G LTP TP+ L + Sbjct: 121 PKSPNIVLLSPSGSPEPFYAEFGWTVAPGANLPVPGPDTLWTAEAGAKLTPATPLVLTWD 180 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 N +LF RT ++D+ Y+F + D V N G + RH + + EG I Sbjct: 181 NGQGLLFRRTFTVDDRYMFTVKDEVENKGAAAATLYSYGLVSRHGMPHTQGYYILHEGLI 240 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 V+GD L E Y+ ++ + + WLGI+DKYWA+ IP ++ S+F + Sbjct: 241 GVMGDHGLQEVTYAKMDDAKPLAMKATGGWLGITDKYWAATVIPDQKAQVDSRFSSSTVA 300 Query: 282 HAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 R +QA + + +I PG SI + + LFAGAKE + YE+ I RF++LIDWGWFY Sbjct: 301 GTRTFQADYLGSAQSIAPGASIASQSRLFAGAKEVAVVDGYERQYGIDRFDLLIDWGWFY 360 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI KP+F+++ + Y LVGNFG+AI++ TV +K +FFPLA K Y S A MK +QP++ +R Sbjct: 361 FITKPLFLVIDWIYKLVGNFGVAILIVTVLLKGIFFPLANKSYASMAKMKALQPEMMAIR 420 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E++ + Q+A ++LYK INP+AGC PIL+QIPVFFA+YKV+ +++EMR APF+G Sbjct: 421 ERYADDKVK-QQQATMELYKKEKINPVAGCLPILIQIPVFFALYKVLFVTIEMRQAPFFG 479 Query: 461 WIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 WI DL+A DPT +F LFG++P+ L ++ +G WP+IM ++M++QMK++P P D Sbjct: 480 WIHDLSAPDPTTVFNLFGLIPWDPSVVPVLGPYLMLGAWPLIMGVTMWVQMKLNPAPPDP 539 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 QAMI N+MP++F F L+ F AGL+IYW+W+N +S++QQAVIM+ +G +I L D + TF Sbjct: 540 TQAMIFNYMPIIFTFMLAHFAAGLVIYWAWNNTLSVLQQAVIMRRNGVKIELWDNITRTF 599 Query: 575 SKNYNSQ 581 SK ++ Sbjct: 600 SKKKTAK 606 >gi|254473802|ref|ZP_05087197.1| 60 kDa inner membrane insertion protein [Pseudovibrio sp. JE062] gi|211957188|gb|EEA92393.1| 60 kDa inner membrane insertion protein [Pseudovibrio sp. JE062] Length = 603 Score = 624 bits (1610), Expect = e-176, Method: Composition-based stats. Identities = 263/603 (43%), Positives = 376/603 (62%), Gaps = 24/603 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM-----------NNERKNIQTVKQPNQV 49 M N N VAI LS++++ WQ F P++E + + V P Sbjct: 1 MNDNRNMIVAIVLSLVVLLGWQYFIAGPQLEAQQEAQQAQLANDAQQAGSSSPVALPEGA 60 Query: 50 DNSYAAVLIDD---------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 A + R QAL+ SPR+ + PSL GS+NLKGA+ DDL L+GY Sbjct: 61 SGQVTAPGTESGTAAQSFVSREQALAASPRLTIDTPSLSGSVNLKGAKLDDLRLKGYRQT 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLV 159 ++ +S V L SP + Y+AE +V+ I+LPN+ TVW + LTP++PI L Sbjct: 121 IAKDSETVVLFSPKGSPAPYYAEHGWVADPGVQIKLPNAETVWTAETSGNLTPSSPIVLN 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N ++F+RT S+DE+Y+F + V NNS ++ P G I R+ F + EG Sbjct: 181 WDNGEGLVFKRTFSVDENYMFTVDQEVQNNSGQNVQLYPYGLIARNGEPETAGFFVLHEG 240 Query: 220 FIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 I V+GD+ L E YSD I+ SI + WLG +DKYWA+ IP+ T F F Y Sbjct: 241 LIGVIGDEGLQEINYSDLIDDGSIRPGRANMGWLGFTDKYWAATLIPTPGTEFQPNFSYN 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + +Q+ + + ++ G IT ++ L+AGAK I Y+ I F+++IDWGW Sbjct: 301 ARTQ-NFQSDYLGSATQVVDGAKITNSSLLYAGAKITSLIDGYQNSYDILNFDLMIDWGW 359 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FYF+ KPMF + + Y+LVGNFGIAI+L TV VK +FFPLA K YVS + MK +QPK+ E Sbjct: 360 FYFLTKPMFWTIDWLYSLVGNFGIAILLVTVIVKAIFFPLANKSYVSMSRMKLVQPKMTE 419 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+K Q Q+AM++LYKT INPLAGC P+L+QIPVFF++YKV+ +++EMRHAPF Sbjct: 420 IREKYKDDK-QKQQQAMMELYKTEKINPLAGCLPMLIQIPVFFSLYKVLFVTIEMRHAPF 478 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI+DL+A DPT IF LFG++P+ P F+ +G+WP+IM ++MF+QMKM+P PA+ Q M Sbjct: 479 FGWIQDLSAPDPTTIFNLFGLIPWDPPTFLMIGVWPLIMGITMFLQMKMNPAPAEPAQQM 538 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I NWMPV+F F L++FPAGL+IYW+W+N +S++QQ VIM+ G ++ L D L++TF + Sbjct: 539 IFNWMPVIFTFMLATFPAGLVIYWAWNNTLSVLQQGVIMRRQGVKLELFDNLKATFKRKP 598 Query: 579 NSQ 581 + Sbjct: 599 KEE 601 >gi|90422337|ref|YP_530707.1| putative inner membrane protein translocase component YidC [Rhodopseudomonas palustris BisB18] gi|90104351|gb|ABD86388.1| protein translocase subunit yidC [Rhodopseudomonas palustris BisB18] Length = 632 Score = 624 bits (1609), Expect = e-176, Method: Composition-based stats. Identities = 246/629 (39%), Positives = 360/629 (57%), Gaps = 50/629 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER----------------------- 37 M N N +A+ LS +++ WQ F+ P++E+ Sbjct: 1 MTDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAELASKSQAVNPAQPQGAQPATPAA 60 Query: 38 ---------KNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQ 88 A + R AL+ SPRV++ P L GSI LKGA+ Sbjct: 61 PGAAIPQPNAATAPAGSAPNAIQPQANTPVVSREAALAASPRVKIDTPRLSGSIALKGAR 120 Query: 89 FDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANN-IELPNSNTVWNLISG 147 DD+ L + V SP + L SPS + N Y+AE +V+ A +++P+ NT W Sbjct: 121 IDDIALVQFRETVDPKSPAIELFSPSGSANPYYAEFGWVAAAGTSVKIPDQNTQWEQDGT 180 Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 LTP P+ L + N + F RTI++DE YLF + D VTN + P I RH Sbjct: 181 GSLTPNHPVTLKYDNGEGLTFRRTITIDERYLFTMKDEVTNVGNAPVTLYPFALISRHGT 240 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 + + EG + LG++ L E YS I+++ NF +N WLGI+DKYWA+ +P Sbjct: 241 PHVAGYYILHEGLVGYLGEQGLQEYGYSKIDEAKAVNFKVTNGWLGITDKYWAAALLPDT 300 Query: 268 ETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT--------- 317 ++F L++ YQ + + TI G + T LFAGAKE T Sbjct: 301 SAQLQARFSSNLANNVRTYQTDYLQDAQTIAIGGTGTANARLFAGAKEAGTVGINFPALG 360 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + Y KDL + F++LIDWGWFYFI KPMF+ + +F++LVGNFGIAI+L TV +KLLF P Sbjct: 361 LGGYNKDLGLNHFDLLIDWGWFYFITKPMFVALDFFFHLVGNFGIAILLVTVIIKLLFLP 420 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 LA K Y S A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC P+LLQI Sbjct: 421 LANKSYASMAKMKAIQPQLAALKERHPDDKAK-QQQEMMEIYRKEKINPVAGCLPVLLQI 479 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVG 491 PVFF++YKV+ +++EMRHAPF+GWI DL+A DPTN+F LFG+L F + ++ +G Sbjct: 480 PVFFSLYKVLFVTIEMRHAPFYGWIHDLSAPDPTNLFNLFGLLAFDPTHVPVIGHYLVLG 539 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 WPI+M ++M++QMK++P P D Q MI WMP++F F L+SFPAGL+IYW+W+N++S+V Sbjct: 540 AWPIVMGITMWVQMKLNPTPPDPTQQMIFAWMPLIFTFMLASFPAGLVIYWAWNNLLSVV 599 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 QQ IM+ +G ++ L D L+++F++ + Sbjct: 600 QQGYIMRRNGVKVELFDNLKASFARKKKN 628 >gi|254561547|ref|YP_003068642.1| transmembrane protein, OxaA-like, preprotein translocase component [Methylobacterium extorquens DM4] gi|254268825|emb|CAX24786.1| transmembrane protein, OxaA-like, preprotein translocase component [Methylobacterium extorquens DM4] Length = 637 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 250/608 (41%), Positives = 366/608 (60%), Gaps = 36/608 (5%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD--------------- 50 N FVAIALS++++ W F P E ++ Q Sbjct: 28 NMFVAIALSLVVLLGWHYFVTGPASERQRQAAQSQTAQTGAPQTADGIPSPSPREGSPNA 87 Query: 51 ------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 AA R AL+ S RV + P+L GSI LKGA+ DD++L+ YH VS Sbjct: 88 PAPGTLPGAAAQGPVSREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHETVSDE 147 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SP + LLSP+ + N Y+AE +V AN LPN++T+W G +L P P+ L + N Sbjct: 148 SPRIVLLSPTGSANPYYAEFGWVG-ANAGPLPNADTLWK-ADGDLLAPGRPLTLTWDNGQ 205 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 ++F+R +++D+ ++F + D V N S + + P + R + + EG I VL Sbjct: 206 GLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQTQGYYVLHEGLIGVL 265 Query: 225 GDKSLVEQKYSDIEKSSI---------SNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G L E Y + K + + + W+GI+DKYWA+ IP ++ F F Sbjct: 266 GGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKPFTGAF 325 Query: 276 KYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 +DG + YQ + +T+ P S TT LFAGAKE I+ YE++ I +F+++I Sbjct: 326 TERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNQINAYEREFGIKQFDLMI 385 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 DWGWF+F+ KPMF + +F++L+GNFG++I+L T+ +KL F P+A + YVS A MK +QP Sbjct: 386 DWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKMKAVQP 445 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 ++ +RE++K + Q+AM++LYK INP+AGCWP+L+QIPVFFA+YKV+ I++EMR Sbjct: 446 EMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFITIEMR 504 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSPPPA 512 HAPF+GWI+DLAA DPT+I LFG+LPF P + +H+G+WPIIM ++MFIQMKM+P P Sbjct: 505 HAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKMNPAPP 564 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA + +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D LR Sbjct: 565 DPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWDNLRG 624 Query: 573 TFSKNYNS 580 F + S Sbjct: 625 MFKRGNKS 632 >gi|240138939|ref|YP_002963414.1| transmembrane protein, OxaA-like, preprotein translocase component [Methylobacterium extorquens AM1] gi|240008911|gb|ACS40137.1| transmembrane protein, OxaA-like, preprotein translocase component [Methylobacterium extorquens AM1] Length = 637 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 249/608 (40%), Positives = 365/608 (60%), Gaps = 36/608 (5%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-RKNIQTVKQPNQVDNSYAAVL------- 57 N FVAIALS++++ W F P E + P D + Sbjct: 28 NMFVAIALSLVVLLGWHYFVTGPASERQRQAAQSQTAQTGAPQTADGIPSPSPREGSPNA 87 Query: 58 -------------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 R AL+ S RV + P+L GSI LKGA+ DD++L+ YH VS Sbjct: 88 PAPGTLPGAGALGPVSREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHETVSDE 147 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SP + LLSP+ + N Y+AE +V AN LPN++T+W G +L P P+ L + N Sbjct: 148 SPRIVLLSPTGSANPYYAEFGWVG-ANAGPLPNADTLWK-ADGDLLAPGRPLTLTWDNGQ 205 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 ++F+R +++D+ ++F + D V N S + + P + R + + EG I VL Sbjct: 206 GLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQTQGYYVLHEGLIGVL 265 Query: 225 GDKSLVEQKYSDIEKSSI---------SNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G L E Y + K + + + W+GI+DKYWA+ IP ++ F F Sbjct: 266 GGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKPFTGAF 325 Query: 276 KYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 +DG + YQ + +T+ P S TT LFAGAKE I+ YE++ I +F+++I Sbjct: 326 TERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNQINAYEREFGIKQFDLMI 385 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 DWGWF+F+ KPMF + +F++L+GNFG++I+L T+ +KL F P+A + YVS A MK +QP Sbjct: 386 DWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKMKAVQP 445 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 ++ +RE++K + Q+AM++LYK INP+AGCWP+L+QIPVFFA+YKV+ I++EMR Sbjct: 446 EMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFITIEMR 504 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSPPPA 512 HAPF+GWI+DLAA DPT+I LFG+LPF P + +H+G+WPIIM ++MFIQMKM+P P Sbjct: 505 HAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKMNPAPP 564 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA + +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D LR Sbjct: 565 DPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWDNLRG 624 Query: 573 TFSKNYNS 580 F + S Sbjct: 625 MFKRGNKS 632 >gi|299132593|ref|ZP_07025788.1| membrane protein insertase [Afipia sp. 1NLS2] gi|298592730|gb|EFI52930.1| membrane protein insertase [Afipia sp. 1NLS2] Length = 611 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 267/610 (43%), Positives = 368/610 (60%), Gaps = 32/610 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE-------------MNNERKNIQTVKQPN 47 M N N +A+ LS +I+ AWQ FY P++E+ N T + P Sbjct: 1 MTDNRNTIIAVVLSGLILLAWQYFYNMPQMEKQRAAQQTQMQAANPANSSAPAATTQTPA 60 Query: 48 QVDNSY----------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + A + DRA+ ++ SPRV++ PSLIGSI LKGA+ DD+ Y Sbjct: 61 AGSAAPTPASPGAEQQQAAPVKDRAEVIASSPRVKIDTPSLIGSIALKGARIDDVAFVKY 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPI 156 V SP L SP+ TK Y+AE +V A + +LP +TVW LTPTTP+ Sbjct: 121 RETVDPKSPAEVLFSPTGTKAPYYAEFGFVPAAGASAKLPGLDTVWTQQGSNALTPTTPV 180 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + N ++F RT+S+DE Y+F I D V N+ P G I RH + + + Sbjct: 181 VLTYDNGEGLVFTRTLSVDEKYVFTIKDEVANSGTAPATLYPFGLISRHGLPETSGYYIL 240 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 EG I VLGDK L E Y ++++ S F SN+WLGI+DKYWA+ +P S ++F Sbjct: 241 HEGPIGVLGDKGLQEYTYKKMDETKASEFKVSNAWLGITDKYWAATLLPDPAASLTARFS 300 Query: 277 YLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 G R YQ + + +T+ G TTT LFAGAKE T+ Y+K L + RFE+LID Sbjct: 301 SKLSGTTRVYQTDYLLDPVTVQAGGHATTTTRLFAGAKEVATVDAYDKQLKLNRFELLID 360 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWFYFI KPMF + + Y L GNFG+AI+L TV VK +FFPLA K Y S A MK +QP+ Sbjct: 361 WGWFYFITKPMFWTIDHLYRLFGNFGVAILLVTVIVKAIFFPLANKSYASMAKMKAVQPQ 420 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + L+EK+ + Q+ M+ +YK INP+AGC PI +QIPVFFA+YKV+ I++EMRH Sbjct: 421 LAALKEKYPDDKVK-QQQEMMDIYKKEKINPIAGCLPIAIQIPVFFALYKVLFITIEMRH 479 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSP 509 APF+GWI DL+A DPT++F LFG+LP+ ++ +G WP+IM ++M+ QMK++P Sbjct: 480 APFFGWIHDLSAPDPTHVFNLFGLLPYDPSAVPIIGHYLAIGAWPLIMGVTMWFQMKLNP 539 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D Q MI +WMPV+F F L+SFPAGL+IYW+W+N +S++QQ+ IMK +G +I L D Sbjct: 540 APPDATQKMIFDWMPVIFTFMLASFPAGLVIYWAWNNTLSVIQQSAIMKKNGVKIELFDN 599 Query: 570 LRSTFSKNYN 579 L+STF+ Sbjct: 600 LKSTFAGGKK 609 >gi|182680230|ref|YP_001834376.1| 60 kDa inner membrane insertion protein [Beijerinckia indica subsp. indica ATCC 9039] gi|254772748|sp|B2IDV5|OXAA_BEII9 RecName: Full=Inner membrane protein oxaA gi|182636113|gb|ACB96887.1| 60 kDa inner membrane insertion protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 604 Score = 620 bits (1600), Expect = e-175, Method: Composition-based stats. Identities = 246/601 (40%), Positives = 368/601 (61%), Gaps = 27/601 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA------- 54 + + N ++AI LS++++ W F+ P++E+ + + Q ++ A Sbjct: 3 QDSRNLYLAIGLSLLVLIGWNYFFAGPQVEKARQAQIVREQQAQTQTTSDTTARSDLNVP 62 Query: 55 ---------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 R +AL+ SPRV+L P+L GSINL+GA+ DD++L+ Y V+ +S Sbjct: 63 GQRSLPGESPQTQLSRPEALAASPRVKLDTPNLFGSINLRGARIDDVSLKAYRETVAKDS 122 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 P + LLSPS T Y+A+ +V+ A + LP S+T+W+ ++LTP P+ L + N Sbjct: 123 PNIVLLSPSGTPAPYYADAGFVAPAEAGLLLPKSDTLWS-ADREVLTPEAPVTLTYDNGQ 181 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 ++F RTIS+D+ ++F + D V N + + P + RH + EG + V+ Sbjct: 182 GLIFHRTISVDDRFMFTLTDKVENKTDKPVTLYPYSLVSRHGRPVTAGYAVLHEGMVGVI 241 Query: 225 GDKSLVEQKYSDI--EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 GD L E Y I E+++ +F + WLG +DKYWA+V P + T F +F Sbjct: 242 GDNGLQEITYDKIHKEENATKSFKGTGGWLGFTDKYWAAVIAPDQATPFEGRFSERGTTT 301 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQ +TI PG + + LFAGAKE T+ Y +L I +F++LIDWG+FYFI Sbjct: 302 PLYQTDALGPALTIAPGGTGGDMSRLFAGAKETQTLDDYRNELGIKKFDLLIDWGYFYFI 361 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 +PMF ++ Y +VGNFG+AI+ TV VK +FFPLA + Y+S A MK IQP++ LRE+ Sbjct: 362 TRPMFWILHTIYQVVGNFGVAILCITVLVKAVFFPLANRSYLSMAKMKAIQPQMLALRER 421 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + + Q+ +++LYK INP+AGC P+L+QIPVFFA+YKV+ +++EMR APF+GWI Sbjct: 422 YADDKVK-QQQELMELYKREKINPVAGCLPMLIQIPVFFALYKVLFVTIEMRQAPFFGWI 480 Query: 463 KDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 +DL+A DPTNIF LFG+LPF + F+ +GIWP+IM +SMF QMKM+P PAD Q Sbjct: 481 RDLSAPDPTNIFNLFGLLPFDPTHLPMIGHFLAIGIWPLIMGVSMFFQMKMNPEPADPVQ 540 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + +WMPV+F F L +FP+GL+IYW+W+N +S++QQ++IMK G ++ L D L STF K Sbjct: 541 KQMFSWMPVIFTFMLGTFPSGLVIYWTWNNTLSVLQQSLIMKRAGVKVELWDNLMSTFRK 600 Query: 577 N 577 Sbjct: 601 K 601 >gi|163851774|ref|YP_001639817.1| 60 kDa inner membrane insertion protein [Methylobacterium extorquens PA1] gi|254773001|sp|A9W590|OXAA_METEP RecName: Full=Inner membrane protein oxaA gi|163663379|gb|ABY30746.1| 60 kDa inner membrane insertion protein [Methylobacterium extorquens PA1] Length = 616 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 251/608 (41%), Positives = 366/608 (60%), Gaps = 36/608 (5%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD--------------- 50 N FVAIALS++++ W F P E ++ Q Sbjct: 7 NMFVAIALSLVVLLGWHYFVTGPASERQRQAAQSQTAQTGAPQTADGIPSPSPREGGPNA 66 Query: 51 ------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 AA R AL+ S RV + P+L GSI LKGA+ DD++L+ YH VS Sbjct: 67 PAPGTLPGAAAQGPVSREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHETVSDE 126 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SP + LLSP+ T N Y+AE +V AN LPN++T+W G +L P P+ L + N Sbjct: 127 SPRIVLLSPTGTANPYYAEFGWVG-ANAGPLPNADTLWK-ADGDLLAPGRPLTLTWDNGQ 184 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 ++F+R +++D+ ++F + D V N S + + P + R + + EG I VL Sbjct: 185 GLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQTQGYYVLHEGLIGVL 244 Query: 225 GDKSLVEQKYSDIEKSSI---------SNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G L E Y + K + + + W+GI+DKYWA+ IP ++ F F Sbjct: 245 GGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKPFTGAF 304 Query: 276 KYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 +DG + YQ + +T+ P S TT LFAGAKE I+ YE++ I +F+++I Sbjct: 305 TERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNQINAYEREFGIKQFDLMI 364 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 DWGWF+F+ KPMF + +F++L+GNFG++I+L T+ +KL F P+A + YVS A MK +QP Sbjct: 365 DWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKMKAVQP 424 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 ++ +RE++K + Q+AM++LYK INP+AGCWP+L+QIPVFFA+YKV+ I++EMR Sbjct: 425 EMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFITIEMR 483 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSPPPA 512 HAPF+GWI+DLAA DPT+I LFG+LPF P + +H+G+WPIIM ++MFIQMKM+P P Sbjct: 484 HAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKMNPAPP 543 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA + +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D LR Sbjct: 544 DPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWDNLRG 603 Query: 573 TFSKNYNS 580 F + S Sbjct: 604 MFKRGNKS 611 >gi|328545250|ref|YP_004305359.1| transmembrane protein, OxaA-like, preprotein translocase component [polymorphum gilvum SL003B-26A1] gi|326414992|gb|ADZ72055.1| Transmembrane protein, OxaA-like, preprotein translocase component [Polymorphum gilvum SL003B-26A1] Length = 607 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 260/602 (43%), Positives = 368/602 (61%), Gaps = 26/602 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE---------------------MNNERKN 39 M N N F+AIALS++++ WQ F P++E Sbjct: 1 MADNRNTFLAIALSLVVLLGWQYFVARPQLERQQAELAQQDAQQQAAGQDAQAPTPGATA 60 Query: 40 IQTVKQPNQVDNSYAAVLID-DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 ++ P + A + R AL S RV ++ P + GSINL GA+ DDL L+ Y Sbjct: 61 PGSLPAPGSTAPAAGAQPVALTREAALGTSARVTIETPRVSGSINLAGARIDDLRLKDYR 120 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIK 157 V SP + L SP Y+A+ +V+ + LP +++W++ LTP TP+ Sbjct: 121 ETVDPKSPTIVLFSPKGGPKPYYADFGWVTDGTKTVALPGPDSLWSVEGSDRLTPQTPVT 180 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 L F N ++F+RT ++DE+Y+F + V N + + IR P G I+R + + Sbjct: 181 LTFDNGEGLVFKRTFTIDENYMFSVSQEVVNGTQEAIRLFPYGLIVRRGKPETAGFYILH 240 Query: 218 EGFIAVLGDKSLVEQKYSDIE-KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 EG I V G+K L E YSD+E I + WLGI+DKYWA+ IP +SF F Sbjct: 241 EGLIGVFGEKGLQEVDYSDVEEDGQIRPGQVDSGWLGITDKYWAATLIPMPGSSFQPSFG 300 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 Y + +QA F + + G S + +++LFAGAKE I YE+ L I RFE+LIDW Sbjct: 301 YTAT-TDNFQADFLGAAVDVASGASGSASSYLFAGAKETKVIDAYEEALNIARFELLIDW 359 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GWFYF+ KPMF ++ + ++LVGNFGIAI+L TV VKL+FFPLA K YVS + MK +QP++ Sbjct: 360 GWFYFLTKPMFFVIDWLFHLVGNFGIAILLVTVLVKLVFFPLANKSYVSMSKMKLVQPQM 419 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E+R+++K + Q+A+++LYK INPLAGC PIL+QIPVFFA+YKV+ +++EMRHA Sbjct: 420 TEIRDRYKDDKAK-QQQALMELYKKEKINPLAGCLPILIQIPVFFALYKVLFVTIEMRHA 478 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 PF+GWI+DL+A DPT IF LFG++P+ P + +GIWP+IM ++MF+QMKM+P P D Q Sbjct: 479 PFFGWIQDLSAPDPTTIFNLFGLIPWDPPQMLMLGIWPLIMGVTMFVQMKMNPAPPDPTQ 538 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 MI WMPV+F F L+SFPAGL+IYW+W+N +SI QQ VIM+ GA++ L D L+ TF + Sbjct: 539 QMIFTWMPVIFTFMLASFPAGLVIYWAWNNSLSIAQQYVIMRRQGAKVELWDNLKITFKR 598 Query: 577 NY 578 Sbjct: 599 KK 600 >gi|304392412|ref|ZP_07374353.1| inner membrane protein OxaA [Ahrensia sp. R2A130] gi|303295516|gb|EFL89875.1| inner membrane protein OxaA [Ahrensia sp. R2A130] Length = 612 Score = 617 bits (1591), Expect = e-174, Method: Composition-based stats. Identities = 261/612 (42%), Positives = 374/612 (61%), Gaps = 32/612 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN---SYAAVL 57 M+ N+ +A LS+ +V+AWQ + PR+E + Q V++ + A Sbjct: 1 MDNQRNFILAAVLSLGVVFAWQALVINPRMEAERAAIEAQQKVEEARTAEAESVPGATTA 60 Query: 58 IDDRAQALSMSP-------------------------RVELKNPSLIGSINLKGAQFDDL 92 A+A + P RV L +P L GS+NL+G + DDL Sbjct: 61 PQTGAEAGAGVPAGQATSGDGAVPGAAPAASAQSSAGRVPLASPRLEGSVNLQGGRIDDL 120 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L Y V SP + LL+P+ +AYFAE Y +LP +T+W L +G+ LTP Sbjct: 121 RLLDYRETVDDTSPNIQLLTPAGNPDAYFAEFGYSPNEAAGQLPGPSTIWQLAAGERLTP 180 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212 T I L + N + F RTI++D+ Y+F I V N S + P GRI R+ Sbjct: 181 ETSISLQYVNDKGLTFTRTIAMDDDYMFTIEQRVKNESGTDVSLRPYGRIARYGKPETAG 240 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPS--KET 269 + + EG I +G++ L E Y DIE I+ S+ WLGI+DKYWA+ IP Sbjct: 241 IYVLHEGLIGSVGEQGLDEVDYGDIEDDKRITKEPASSGWLGITDKYWATALIPQTKDGG 300 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 +F + + Y S G YQ+ + A+ ++I G+ T FAGAK+ I Y ++L IP Sbjct: 301 TFTAHYNYYSAGTPFYQSDYLASALSIPNGQEQGVTTRFFAGAKKVDIIDAYAENLEIPL 360 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F+ +IDWGWFY++ KP+F+LM++ Y+L+GNFG+AI++ TV VK +FFPLA K Y S ANM Sbjct: 361 FDKIIDWGWFYWLTKPLFLLMNWVYHLIGNFGVAILVVTVLVKAVFFPLANKSYASMANM 420 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K +QP++ +RE+ K + Q AM++LYK INP AGCWP+L+QIPVFFAIYKVI + Sbjct: 421 KKVQPQMTAIREQHKDD-AKAQQAAMMKLYKEEKINPAAGCWPVLIQIPVFFAIYKVIYV 479 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 ++EMRHAPF+GWI+DL+A DPT+IF LFG+LPF +P F+ +G+WP++M ++MF+QM+M+P Sbjct: 480 TIEMRHAPFFGWIQDLSAPDPTSIFNLFGLLPFEVPLFLMIGVWPLLMGITMFVQMQMNP 539 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D QAMI W+PVVF F L++FPAGL+IYW+W+N +SI+QQ +IMK GA+I L D Sbjct: 540 APPDPTQAMIFKWLPVVFTFMLATFPAGLVIYWAWNNFLSIIQQGLIMKRQGAKIELWDN 599 Query: 570 LRSTFSKNYNSQ 581 L+ FSK +++ Sbjct: 600 LKGIFSKKTDAE 611 >gi|319780382|ref|YP_004139858.1| membrane protein insertase, YidC/Oxa1 family domain containing [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166270|gb|ADV09808.1| membrane protein insertase, YidC/Oxa1 family domain containing [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 603 Score = 617 bits (1590), Expect = e-174, Method: Composition-based stats. Identities = 273/601 (45%), Positives = 376/601 (62%), Gaps = 23/601 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41 ME N N+F+ IALSV+I+ WQ FYV PR E + Q Sbjct: 1 MENNRNFFITIALSVLILAVWQYFYVLPRSEAQREAARVEQQRVEEQKKAAGTNPGTDTG 60 Query: 42 TVKQPNQVDNSYA--AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 T P + N+ AV R QAL+ + R ++ PSL GSINL GA+ DDL L+ Y Sbjct: 61 TPAAPGAIPNAPGTDAVTPAGREQALATTTRAKIDTPSLEGSINLTGARLDDLKLKHYTE 120 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 V NSP ++LL+P+ N Y+AE+ +V +P TVW + LTPTTP+ L Sbjct: 121 TVDKNSPEISLLNPAALPNGYYAEIGFVGNDKTGAVPGPETVWAVDGNATLTPTTPVTLT 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N + F+RT S+D +Y+F + DTV N + S GR+ R +T+ + EG Sbjct: 181 YSNDKGLTFKRTFSVDTNYMFTVSDTVQNAGTAAVSLSNYGRVTRFDKPLVASTYVLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 I G + L E KY+ IEK + ++ WLGI+DKYWA +P+++ F ++ Y Sbjct: 241 LIGFTGTEGLQEHKYASIEKDKQFTPGKSTDGWLGITDKYWAVTLVPTEKQPFQPRYAYF 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 DG RYQ+ F + IT+ G+S T + +FAGAKE I+ Y +D I RF++LIDWGW Sbjct: 301 EDGRHRYQSDFLTDPITVDAGQSATVESEIFAGAKEVGKINAYAEDRHIKRFDLLIDWGW 360 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+FI KPMF L+ Y GNFG+AI+ TTV VK +F+PLA K Y S ANMK +QPK+ E Sbjct: 361 FHFITKPMFWLIDTLYKFFGNFGLAILATTVIVKAIFYPLANKSYASMANMKKVQPKMLE 420 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+ Q+AM++LYKT INPLAGCWP+ LQIPVFF++YKV+ I++EMRHAPF Sbjct: 421 IREKYADDK-MKQQQAMMELYKTEKINPLAGCWPVALQIPVFFSLYKVLYITIEMRHAPF 479 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI+DLAA DPT++F LFG++P LP + +G+WP+IM ++MF+QM+M+P P D QA Sbjct: 480 FGWIQDLAAPDPTSLFNLFGLIPVTLPHMLMIGVWPLIMGVTMFLQMRMNPTPPDPTQAA 539 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I WMPV+F F ++ FPAGL+IYW+W+N +SI+QQ +IMK GA+I L D L + F K Sbjct: 540 IFTWMPVIFTFMMAGFPAGLVIYWAWNNTLSILQQGIIMKRQGAKIELWDNLVALFRKKP 599 Query: 579 N 579 + Sbjct: 600 S 600 >gi|154245865|ref|YP_001416823.1| putative inner membrane protein translocase component YidC [Xanthobacter autotrophicus Py2] gi|154159950|gb|ABS67166.1| 60 kDa inner membrane insertion protein [Xanthobacter autotrophicus Py2] Length = 616 Score = 617 bits (1590), Expect = e-174, Method: Composition-based stats. Identities = 244/618 (39%), Positives = 357/618 (57%), Gaps = 40/618 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN------------------------- 35 M N N F+AI LS+ I+ WQ F+ P+ E Sbjct: 1 MSDNRNMFIAIGLSLAILIGWQFFFGIPQAERQRQAAEQQRIAQQAQQPAPGATPGATPG 60 Query: 36 ERKNIQTVKQPNQVDNSYAAVLID----DRAQALSMSPRVELKNPSLIGSINLKGAQFDD 91 P A + R +AL+++PR ++ L GSI LKG + DD Sbjct: 61 TTAGAAPGATPGSAGVPQAGSPVPARPLTREEALALTPRAAIETQRLKGSIALKGGRVDD 120 Query: 92 LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKIL 150 L L YH V SP + LLSPS N ++AE + + A +++P +TVW L Sbjct: 121 LLLTEYHETVDPKSPNIVLLSPSGAPNPFYAEFGWTAAAGTGVKVPGPDTVWTTSG--TL 178 Query: 151 TPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210 T TP+ L + N ++F RT ++D+HY+F + D V N + + P + RH Sbjct: 179 TEKTPLTLSWDNGAGLIFHRTYTIDDHYMFAVKDEVENKTGAAVTLYPYALVSRHGIPHV 238 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 + + EG I VLGD L E Y+ ++K F + WLGI+DKYWA+ IP + Sbjct: 239 AGFYILHEGLIGVLGDSGLQEITYAKMDKEKPHTFAATGGWLGITDKYWAATVIPDQSVK 298 Query: 271 FHSQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 ++F + G +QA + A +T+ PG ++ LFAGAK + Y+ I R Sbjct: 299 VDAKFSTSTFAGTQTFQADYLAAPLTVEPGATVAAKGQLFAGAKVVQVVDGYKTKYGIDR 358 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F++LIDWGWFYFI KP+F+ + + Y LVGNFG+AI++ TV +K LFFPLA K Y S A M Sbjct: 359 FDLLIDWGWFYFITKPLFLAIDWLYRLVGNFGVAILIITVALKGLFFPLANKSYASMAKM 418 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K +QP++ +RE++ + Q+A+++LYK INP+AGC PI++QIPVFFA+YKV+ + Sbjct: 419 KAVQPEVTAIRERYADDKVK-QQQALMELYKKEKINPVAGCLPIVIQIPVFFALYKVLFV 477 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFI 503 ++EMRHAPF+GWI+DL+A DPT IF LFG++P+ L G++ +G WPIIM ++M++ Sbjct: 478 TIEMRHAPFFGWIRDLSAPDPTTIFNLFGLIPWDPSSVPVLGGYLMLGAWPIIMGITMWV 537 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 QMK++P P D Q MI NWMP++F F L+ F AGL+IYW+W+N +S+ QQA+IMK +G + Sbjct: 538 QMKLNPAPPDPTQQMIFNWMPIIFTFMLAHFAAGLVIYWAWNNTLSVSQQAMIMKRNGVK 597 Query: 564 IGLIDRLRSTFSKNYNSQ 581 I L D ++S F K ++ Sbjct: 598 IELWDNIKSAFKKKQPAK 615 >gi|209886640|ref|YP_002290497.1| inner membrane protein OxaA [Oligotropha carboxidovorans OM5] gi|209874836|gb|ACI94632.1| inner membrane protein OxaA [Oligotropha carboxidovorans OM5] Length = 610 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 259/609 (42%), Positives = 363/609 (59%), Gaps = 32/609 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE----------------------MNNERK 38 M N N +A+ LS +++ WQ FY P + Sbjct: 1 MTDNRNTILAVLLSGVVLLGWQYFYNEPEMARQRAAQQAQTQAANPANSAAPNATTQTPA 60 Query: 39 NIQTVKQPNQVD-NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 T P + DRA+ ++ SPR++++ P+LIGSI LKGA+FDD++L Y Sbjct: 61 AGSTAPTPGSPTIQQQQGAQVKDRAEVIAASPRIKIETPNLIGSIALKGARFDDVSLVKY 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPI 156 V SP L SPS TK Y+AE +V A I++P +TVW LT TTP+ Sbjct: 121 RETVDPKSPAEVLFSPSGTKAPYYAEFGFVPAAGATIKMPTLDTVWTQEGSNALTSTTPV 180 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + N + F RTIS+D+ Y+F + D V N+ P G I RH + + + Sbjct: 181 VLKYDNGEGLTFTRTISVDDKYVFTVKDDVANSGTAPTTVYPFGLISRHGVPETSGYYIL 240 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 EG I VLGD+ L E Y ++++ S F +N WLGI+DKYWA+ +P + ++F Sbjct: 241 HEGPIGVLGDQGLQEFSYKNMDEKKTSEFKVTNGWLGITDKYWAATLLPDPAAALTARFS 300 Query: 277 YLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 G R YQ + + + + G S TTT LFAGAKE T+ Y+K L + RFE+LID Sbjct: 301 SNLVGPTRIYQTDYLLDPVAVPAGGSATTTTRLFAGAKEVATVDAYDKQLKLNRFELLID 360 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWFYFI KPMF + Y L GNFG+AI+L TV +K +FFPLA K Y S A MK +QP+ Sbjct: 361 WGWFYFITKPMFWAIDQLYRLFGNFGVAILLVTVAIKAVFFPLANKSYASMAKMKAVQPQ 420 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + L+EK+ + Q+ M+++YK INP+AGC PI +QIPVFFA+YKV+ I++EMRH Sbjct: 421 LTALKEKYPDDRVK-QQQEMMEIYKKEKINPIAGCLPIAIQIPVFFALYKVLFITIEMRH 479 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSP 509 APF+GWI+DL+A DPT+IF LFG+LPF + ++ +G WP+IM ++M+ QMK++P Sbjct: 480 APFFGWIRDLSAPDPTHIFNLFGLLPFDPSAVPLIGTYLAIGAWPVIMGITMWFQMKLNP 539 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D Q MI +WMPVVF F L+SFPAGL+IYW+W+N++S++QQ+ IMK +G +I L D Sbjct: 540 QPPDPTQKMIFDWMPVVFTFMLASFPAGLVIYWAWNNLLSVLQQSAIMKKNGVKIELFDN 599 Query: 570 LRSTFSKNY 578 L+S F+ Sbjct: 600 LKSMFASKK 608 >gi|39933709|ref|NP_945985.1| putative inner membrane protein translocase component YidC [Rhodopseudomonas palustris CGA009] gi|39647556|emb|CAE26076.1| 60 kDa inner membrane protein [Rhodopseudomonas palustris CGA009] Length = 622 Score = 614 bits (1584), Expect = e-173, Method: Composition-based stats. Identities = 248/621 (39%), Positives = 358/621 (57%), Gaps = 43/621 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK----------NIQTVKQPNQVD 50 M N N +A+ LS +++ WQ F+ P++E+ ++ QT + Sbjct: 1 MSDNRNTILAVVLSGLVLLGWQYFFNIPQMEKQRAAQQAQQQAAKQQAETQTPGAASPAA 60 Query: 51 ---------------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 AA R AL+ PR++++ P L GSI LKGA+ DDL L Sbjct: 61 APAAPGAPGSAPASPQQPAAAPTVSREAALAAGPRIKVETPRLSGSIALKGARIDDLALM 120 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTT 154 Y V SP + L SPS + Y+AE +V A +++LP+ NT+W LTP Sbjct: 121 QYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGASVKLPDHNTLWEQEGTGALTPAN 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 P+ L + N + F R I++D+ YLF + D VTN + P I RH + Sbjct: 181 PVTLKWDNGEGLTFRRQITVDDRYLFTVKDDVTNTGGAPVTLYPFALISRHGTPHVEGYY 240 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 + EG I LGD+ L E YS I+++ F +N WLGI+DKYWAS +P ++ Sbjct: 241 ILHEGLIGYLGDQGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDTSAQLQAR 300 Query: 275 FKYLSDGH-ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYEKD 324 F G+ YQ + + T+ G ++T LFAGAKE + Y++ Sbjct: 301 FSANKVGNVTTYQTDYLEDARTVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYDRQ 360 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 L + F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV VKLLF PLA K Y Sbjct: 361 LGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLLFLPLANKSYA 420 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC PILLQIPVFF++Y Sbjct: 421 SMAKMKAIQPQLAALKERHPDDKVK-QQQEMMEIYRKEKINPVAGCLPILLQIPVFFSLY 479 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMS 498 KV+ +++EMRHAPF+GWI DL+A DPTNIF LFG++P+ L ++ +G WP++M Sbjct: 480 KVLFVTIEMRHAPFFGWIHDLSAPDPTNIFNLFGLIPYDPTAIPVLGHYLVLGAWPLVMG 539 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +M+ QMK++P P D Q MI WMPV+F F L+ FPAGL+IYW+W+N +S+ QQA IM+ Sbjct: 540 FTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVAQQAFIMQ 599 Query: 559 MHGAEIGLIDRLRSTFSKNYN 579 +G ++ L D LR++F+K Sbjct: 600 RNGVKVELWDNLRTSFAKKKK 620 >gi|170743186|ref|YP_001771841.1| 60 kDa inner membrane insertion protein [Methylobacterium sp. 4-46] gi|254773005|sp|B0UHI1|OXAA_METS4 RecName: Full=Inner membrane protein oxaA gi|168197460|gb|ACA19407.1| 60 kDa inner membrane insertion protein [Methylobacterium sp. 4-46] Length = 624 Score = 614 bits (1583), Expect = e-173, Method: Composition-based stats. Identities = 246/617 (39%), Positives = 363/617 (58%), Gaps = 44/617 (7%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIE-------------------EMNNERKNIQTVKQP 46 N +AIALS+ ++ W F P++E + + + + P Sbjct: 7 NMIIAIALSLAVLLGWNYFVTAPQVERQRQQQAAQVNPSQGVNPSQGVDPSQGVNASPSP 66 Query: 47 NQVDNSYA------------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 + S R +AL+ +PRV + +L GS+ LKG + DD+ L Sbjct: 67 KEGGPSAPVPGTLPGAAGGSPQAALARDEALARAPRVRIDTEALRGSVALKGGRIDDVAL 126 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 +GYH V SP + LLSP+ + N Y+AE +V N LP S+TVW G +LT Sbjct: 127 KGYHETVDPKSPEIVLLSPAGSANPYYAEFGWVG-QNAGPLPGSDTVWT-ADGDVLTAKK 184 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 P+ L F N ++F RT+S+D+ Y+F I D+V N + + P G + R + Sbjct: 185 PLVLTFDNGAGLVFRRTLSVDDKYMFTIEDSVENKGPNPVTLYPYGLVSRWGKPHTQGYY 244 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSS---------ISNFHESNSWLGISDKYWASVFIP 265 + EG I V+GDK L E Y + K + +S + +LGI+DKYWA+ IP Sbjct: 245 VLHEGMIGVVGDKGLQEYTYDKMAKENPLGAPGTRGVSWPGATGGFLGITDKYWAAATIP 304 Query: 266 SKETSFHSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 ++ + F +G + YQA + PG S+ + LFAGAKE T+ Y + Sbjct: 305 DQQAPYTGSFTERDEGATKVYQASSLGEARAVAPGASVQASQRLFAGAKEVSTVDAYREK 364 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 L I +F++LIDWGWFYFI KPMF + FY L GNFG++I++ T+ +KL F P+A + YV Sbjct: 365 LNIKQFDLLIDWGWFYFITKPMFKALDLFYKLFGNFGVSILVVTLILKLFFLPIANRSYV 424 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A MK +QP++ +RE++ + Q+AM++LYK INP+AGCWP+L+QIPVFF++Y Sbjct: 425 SMAKMKAVQPEMTAIRERYADDKVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFSLY 483 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 KV+ +++EMRHAPF+GWI+DLAA DPT+I LFG+LPF P +H+G+WPI+M ++MF+Q Sbjct: 484 KVLFVTIEMRHAPFFGWIRDLAAPDPTSIVNLFGLLPFTPPDLLHLGVWPIVMGITMFLQ 543 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 MKM+P P D QA + +MP++F F L SFPAGL+IYW+W+N++SI+QQ IM+ +G ++ Sbjct: 544 MKMNPAPPDPVQAQVFTFMPIIFTFMLGSFPAGLVIYWAWNNLLSILQQYWIMRRNGVKV 603 Query: 565 GLIDRLRSTFSKNYNSQ 581 L D LRSTF + + Sbjct: 604 ELWDNLRSTFQRRTQVK 620 >gi|154250755|ref|YP_001411579.1| 60 kDa inner membrane insertion protein [Parvibaculum lavamentivorans DS-1] gi|154154705|gb|ABS61922.1| 60 kDa inner membrane insertion protein [Parvibaculum lavamentivorans DS-1] Length = 609 Score = 613 bits (1582), Expect = e-173, Method: Composition-based stats. Identities = 247/595 (41%), Positives = 356/595 (59%), Gaps = 27/595 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT------------------ 42 M N N+ +AI LSV++ WQ F++ P++E ++ + Sbjct: 1 MGDNRNFIIAIFLSVLVFIGWQYFFIEPQMEAERARQEQLAADNGTAEPAPGAAPSAPGD 60 Query: 43 -----VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 V P AA R +AL+ S RV + + L GS++L+GA+FDDL L Y Sbjct: 61 ARLPSVDAPATRAPGVAASGAVARDEALAQSARVPILSEELQGSVSLRGARFDDLKLLKY 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPI 156 ++ V SP V L SP T+ YF+E +++ NI LP S T W L +G LTP TP+ Sbjct: 121 NVTVDPESPEVELFSPVRTERPYFSEFGFIAAPGANINLPTSATEWELEAGDRLTPQTPV 180 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + N ++F R I+LDEH+LF + D + N S +++ P G I R ++ F + Sbjct: 181 TLRWDNGQGLVFHREIALDEHFLFTVTDRIENLSANEVTLYPYGLISRTGRPAGSSFFIL 240 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 EGFI Y D E+ ++ WLGI+DKYWA+ +P +F + F Sbjct: 241 HEGFIGEFPSVGEKAITYDDAEEDDPVQVTDTEGWLGITDKYWAAALVPQSGLNFVANFS 300 Query: 277 -YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + YQA F T+ G SIT N LFAGAK I Y +D I +F +LID Sbjct: 301 EHPDPAIVNYQADFRYGAQTVPAGGSITLNNRLFAGAKVSTVIDSY-RDAGIYKFSLLID 359 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWF+F+ +PMF + + VGNFGIAI++ TV +KL+F+PLA K YV+ + MK +QP+ Sbjct: 360 WGWFWFLTQPMFDALHFIALHVGNFGIAILVITVLIKLVFYPLANKSYVAMSKMKKLQPE 419 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 +++LRE++K + Q+ +++LYK +NPLAGC P+L+QIPVFFA+YKV+ +++EMRH Sbjct: 420 MEKLRERYKDDKLK-QQQEIMELYKKEKVNPLAGCLPVLIQIPVFFALYKVLFVTIEMRH 478 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 APF+GWI DL+A DPT+IF LFG++P+ P + +GIWP+IM +MF+Q +M+P PAD Sbjct: 479 APFFGWINDLSAPDPTSIFNLFGLIPWDPPSMLMIGIWPLIMGFTMFVQQRMNPLPADPI 538 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 QA I WMPV+F F L+SFPAGL+IYW+W+N +S++QQ VIMK G +I + L Sbjct: 539 QAQIFTWMPVIFTFMLASFPAGLVIYWAWNNTLSVIQQGVIMKRQGVKIEIFSNL 593 >gi|192289066|ref|YP_001989671.1| inner membrane protein translocase component YidC [Rhodopseudomonas palustris TIE-1] gi|192282815|gb|ACE99195.1| 60 kDa inner membrane insertion protein [Rhodopseudomonas palustris TIE-1] Length = 622 Score = 613 bits (1582), Expect = e-173, Method: Composition-based stats. Identities = 248/621 (39%), Positives = 358/621 (57%), Gaps = 43/621 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK----------NIQTVKQPNQVD 50 M N N +A+ LS +++ WQ F+ P++E+ ++ QT + Sbjct: 1 MSDNRNTILAVVLSGLVLLGWQYFFNIPQMEKQRAAQQAQQQAAKQQAETQTPGAASPAA 60 Query: 51 ---------------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 AA R AL+ PR++++ P L GSI LKGA+ DDL L Sbjct: 61 APAAPGAPGSAPASPQQQAAAPTVSREAALAAGPRIKVETPRLSGSIALKGARIDDLALM 120 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTT 154 Y V SP + L SPS + Y+AE +V A +++LP+ NT+W LTP Sbjct: 121 QYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGASVKLPDHNTLWEQEGTGALTPAN 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 P+ L + N + F R I++D+ YLF + D VTN + P I RH + Sbjct: 181 PVTLKWDNGEGLTFRRQITVDDRYLFTVKDDVTNTGGAPVTLYPFALISRHGTPHVEGYY 240 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 + EG I LGD+ L E YS I+++ F +N WLGI+DKYWAS +P ++ Sbjct: 241 ILHEGLIGYLGDQGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDTSAQLQAR 300 Query: 275 FKYLSDGH-ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYEKD 324 F G+ YQ + + T+ G ++T LFAGAKE + Y++ Sbjct: 301 FSANKVGNVTTYQTDYLEDARTVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYDRQ 360 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 L + F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV VKLLF PLA K Y Sbjct: 361 LGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLLFLPLANKSYA 420 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC PILLQIPVFF++Y Sbjct: 421 SMAKMKAIQPQLAALKERHPDDKVK-QQQEMMEIYRKEKINPVAGCLPILLQIPVFFSLY 479 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMS 498 KV+ +++EMRHAPF+GWI DL+A DPTNIF LFG++P+ L ++ +G WP++M Sbjct: 480 KVLFVTIEMRHAPFFGWIHDLSAPDPTNIFNLFGLIPYDPTAIPVLGHYLVLGAWPLVMG 539 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +M+ QMK++P P D Q MI WMPV+F F L+ FPAGL+IYW+W+N +S+ QQA IM+ Sbjct: 540 FTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVAQQAFIMQ 599 Query: 559 MHGAEIGLIDRLRSTFSKNYN 579 +G ++ L D LR++F+K Sbjct: 600 RNGVKVELWDNLRTSFAKKKK 620 >gi|218530582|ref|YP_002421398.1| YidC translocase/secretase [Methylobacterium chloromethanicum CM4] gi|254773000|sp|B7L2I5|OXAA_METC4 RecName: Full=Inner membrane protein oxaA gi|218522885|gb|ACK83470.1| YidC translocase/secretase [Methylobacterium chloromethanicum CM4] Length = 616 Score = 613 bits (1582), Expect = e-173, Method: Composition-based stats. Identities = 250/609 (41%), Positives = 369/609 (60%), Gaps = 38/609 (6%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIE----------------------EMNNERKNIQTV 43 N FVAIALS++++ W F P E + R+ Sbjct: 7 NMFVAIALSLVVLLGWHYFVTGPASERQRQAAQSQAAQTGAPQTADGIPSPSPREGSPNA 66 Query: 44 KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 P + + A + R AL+ S RV + P+L GSI LKGA+ DD++L+ YH VS Sbjct: 67 PAPGTLPGAAAQGPV-SREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHETVSD 125 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 SP + LLSP+ + N Y+AE +V AN LPN++T+W G +L P P+ L + N Sbjct: 126 ESPRIVLLSPTGSANPYYAEFGWVG-ANAGPLPNADTLWK-ADGDLLAPGRPLTLTWDNG 183 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 ++F+R +++D+ ++F + D V N S + + P + R + + EG I V Sbjct: 184 QGLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQTQGYYVLHEGLIGV 243 Query: 224 LGDKSLVEQKYSDIEKSSI---------SNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 LG L E Y + K + + + W+GI+DKYWA+ IP ++ F Sbjct: 244 LGGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKPFTGA 303 Query: 275 FKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 F +DG + YQ + +T+ P S TT LFAGAKE I+ YE++ I +F+++ Sbjct: 304 FTERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNRINAYEREFGIKQFDLM 363 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 IDWGWF+F+ KPMF + +F++L+GNFG++I+L T+ +KL F P+A + YVS A MK +Q Sbjct: 364 IDWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKMKAVQ 423 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ +RE++K + Q+AM++LYK INP+AGCWP+L+QIPVFFA+YKV+ I++EM Sbjct: 424 PEMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFITIEM 482 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSPPP 511 RHAPF+GWI+DLAA DPT+I LFG+LPF P + +H+G+WPIIM ++MFIQMKM+P P Sbjct: 483 RHAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKMNPAP 542 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D QA + +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D LR Sbjct: 543 PDPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWDNLR 602 Query: 572 STFSKNYNS 580 F + S Sbjct: 603 GMFKRGNKS 611 >gi|146337896|ref|YP_001202944.1| putative inner membrane protein translocase component YidC [Bradyrhizobium sp. ORS278] gi|146190702|emb|CAL74706.1| Inner membrane protein oxaA [Bradyrhizobium sp. ORS278] Length = 622 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 260/622 (41%), Positives = 369/622 (59%), Gaps = 45/622 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK------------------NIQT 42 M N N +A+ LS +++ WQ FY P++E+ + + Sbjct: 1 MTDNRNTILAVILSGLVLILWQVFYNGPQMEKQRAQAQLQSELAKKQGPATQPDGTAPSA 60 Query: 43 VKQPNQVDN---------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 QPN + + A + R A++ +PRV++ P L GSI+LKGA+ DDL Sbjct: 61 TPQPNAAASGSPSAPGGAATTATGVVPRETAIAANPRVKIDTPRLSGSISLKGARIDDLA 120 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANN-IELPNSNTVWNLISGKILTP 152 Y V NSP + L SPSNT Y+AE +V+ A +++P+ NTVW LTP Sbjct: 121 FVQYRETVDPNSPAIVLFSPSNTAEPYYAEFGWVNAAGAKVQVPDQNTVWQQDGANALTP 180 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212 TP+KL + N + + F+RTIS+D+HYLF I D VTN + P G I RH + Sbjct: 181 ATPVKLTYTNGDGLTFQRTISVDDHYLFTIKDDVTNAGSAPVTLYPYGLISRHGTPHVSG 240 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + EG I LG+K L E Y ++ + F +N WLGI+DKYWA+ +P + Sbjct: 241 YYILHEGLIGYLGEKGLQEFTYKKMDDEKAAKFDITNGWLGITDKYWAAALLPMTDARLQ 300 Query: 273 SQF-KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYE 322 + + L D RYQ + N T+ G S T + LFAGAKE + Y Sbjct: 301 ANYSSKLVDNQHRYQTDYVENPQTVPAGGSATVSTRLFAGAKEAGVVGINFPLGGLGGYN 360 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 + L + F++LIDWGWFYF+ KPMF+ + +F+ GNFG++I+L TV VKL F PLA K Sbjct: 361 QQLGLNHFDLLIDWGWFYFLTKPMFLALDFFFRFFGNFGVSILLVTVLVKLAFLPLANKS 420 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y S A MK IQP++ L+E++ Q+ M+++YK INP+AGC P++LQIPVFF+ Sbjct: 421 YASMAKMKAIQPQLQALKERYPDD-RMKQQQEMMEIYKKEKINPVAGCLPVVLQIPVFFS 479 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY---LPGFMH---VGIWPII 496 +YKV+ +++EMRHAPF GWIKDL+A DPTN+FTLFG++PF LP F H +GIWPII Sbjct: 480 LYKVLFVTIEMRHAPFIGWIKDLSAPDPTNLFTLFGLIPFDPTQLPLFGHYLALGIWPII 539 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M ++M+ QMK++P P D QAMI NWMP++F F L+ FPAGL+IYW+W+N +S++QQ+ I Sbjct: 540 MGITMWFQMKLNPAPPDPTQAMIFNWMPLIFTFMLAGFPAGLVIYWAWNNTLSVLQQSFI 599 Query: 557 MKMHGAEIGLIDRLRSTFSKNY 578 M+ +G ++ L D +R TF K Sbjct: 600 MRRNGVKVELFDNIRGTFRKKP 621 >gi|27383209|ref|NP_774738.1| inner membrane protein translocase component YidC [Bradyrhizobium japonicum USDA 110] gi|38502983|sp|Q89BQ0|OXAA_BRAJA RecName: Full=Inner membrane protein oxaA gi|27356383|dbj|BAC53363.1| blr8098 [Bradyrhizobium japonicum USDA 110] Length = 616 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 249/616 (40%), Positives = 360/616 (58%), Gaps = 42/616 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE-----------MNNERKNIQTVK----- 44 M N N +A+ LS +++ AWQ FY P +E+ + + Sbjct: 2 MTDNRNTILAVILSGLVLIAWQYFYNVPAMEKQRAQQQAQAELQKTTPQPTASATPGATP 61 Query: 45 ------QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 QP+ A + R A++ SPRV++ P + GSI+LKG + DD+ L Y Sbjct: 62 QSGGAAQPSTPAAGQQAQPVVARDAAIAASPRVKIDTPRIAGSISLKGGRIDDVALVQYR 121 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIK 157 V SP + L SPS T Y+AE +V +LP++ T+W LTPTTP Sbjct: 122 ETVDPKSPPIVLYSPSGTAEPYYAEFGWVPATGVTAKLPDAQTLWQQDGSGSLTPTTPAV 181 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 L + N + F RTIS+D+HYLF I D V+N + P I RH + + + Sbjct: 182 LKWDNGEGLTFRRTISVDDHYLFTIKDEVSNVGNAPVTLYPFALISRHGTPQVSGYYILH 241 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 EG I L L E Y I+++ NF +N WLG++DKYWAS +P ++F Sbjct: 242 EGLIGYL--DGLQEYAYKKIDEAKSVNFKATNGWLGMTDKYWASALLPDTSAQLQARFSS 299 Query: 278 LSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH---------HYEKDLAI 327 G+ YQ + + +T+ G S T LFAGAKE + Y K+L + Sbjct: 300 NPVGNVHTYQTDYLLDPVTVAIGGSATANARLFAGAKEAGVVGINFPLAGHGGYNKELNL 359 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 F++LIDWGWFYFI KPMF+ + +FY GNFGI+I+L TV VKLLFFPLA K Y S A Sbjct: 360 NHFDLLIDWGWFYFITKPMFLGLDFFYRFFGNFGISILLVTVIVKLLFFPLANKSYASMA 419 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 MK+IQP++ L+E++ + Q+ M+++Y+ INP+AGC P+++QIPVFF++YKV+ Sbjct: 420 KMKSIQPQLQALKERYPDDKVK-QQQEMMEIYRKEKINPVAGCLPVVIQIPVFFSLYKVL 478 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF---YLPGFMH---VGIWPIIMSLSM 501 +++EMR APF+GWIKDL+A DPTN+F LFG++P +P F H +GIWPIIM ++M Sbjct: 479 FVTIEMRQAPFYGWIKDLSAPDPTNLFNLFGLIPLDPTTIPVFGHYLALGIWPIIMGITM 538 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + QMK++P P D Q MI NWMP++F F L+ FPAGL+IYW+W+N +S++QQ+ IM+ +G Sbjct: 539 WFQMKLNPTPPDPTQQMIFNWMPLIFTFMLAGFPAGLVIYWAWNNTLSVLQQSFIMRRNG 598 Query: 562 AEIGLIDRLRSTFSKN 577 ++ L D L++TF++ Sbjct: 599 VKVELFDNLKATFARK 614 >gi|115522671|ref|YP_779582.1| putative inner membrane protein translocase component YidC [Rhodopseudomonas palustris BisA53] gi|115516618|gb|ABJ04602.1| protein translocase subunit yidC [Rhodopseudomonas palustris BisA53] Length = 626 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 245/616 (39%), Positives = 363/616 (58%), Gaps = 47/616 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN--------NERKNIQTVKQPNQVDNS 52 M N N +A+ LS +++ WQ F+ P++E+ +Q QPN + Sbjct: 1 MTDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAEMAARSQATSQVQPTAQPNAQPGA 60 Query: 53 YAAVL----------------------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFD 90 A R AL+ SPRV+++ P L GSI+LKGA+ D Sbjct: 61 SGAQPGVPAPQAGTPTPNAAAPAAVTPTVSRDAALAASPRVKIETPRLSGSISLKGARLD 120 Query: 91 DLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST-ANNIELPNSNTVWNLISGKI 149 D+ L + V SP + L SPS +K+ Y+AE +V+ N+++P+ NTVW Sbjct: 121 DIALVQFRETVDPKSPAIELFSPSGSKHPYYAESGWVAAVGTNVKVPDQNTVWTQEGSNS 180 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209 LTPT+P+ L + N + F RTI++DE YLF + D V+N + P I RH Sbjct: 181 LTPTSPVVLRYDNGEGLTFRRTIAVDERYLFTMKDEVSNIGNAPVTLYPFALISRHGAPQ 240 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 + + EG + LG++ L E Y+ I+++ NF +N WLGI+DKYWAS +P Sbjct: 241 VAGYYILHEGLVGYLGEQGLQEYGYAKIDEAKAVNFKVTNGWLGITDKYWASALLPDTTA 300 Query: 270 SFHSQF-KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI--------HH 320 ++F L++ YQ + + + G + + LFAGAKE + Sbjct: 301 QLQARFSSNLANNVRTYQTDYLLDPQVVPIGGTGSANTRLFAGAKEAGVVGIGFPLGFGG 360 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 Y K L + F++LIDWGWFYFI KPMF+ + +FY+LVGNFG++I+ TV +KLLF PLA Sbjct: 361 YNKQLDLNHFDLLIDWGWFYFITKPMFVALDFFYHLVGNFGLSILFVTVIIKLLFLPLAN 420 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 K Y S A MK IQP++ L+++ + Q+ M+++Y+ INP+AGC P+LLQIPVF Sbjct: 421 KSYASMAKMKAIQPQLQALKDRHPDDKAK-QQQEMMEIYRKEKINPVAGCLPVLLQIPVF 479 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWP 494 F++YKV+ +++EMRHAPF+GWI DL+AADPTNIF LFG++P+ L ++ +GIWP Sbjct: 480 FSLYKVLFVTIEMRHAPFYGWIHDLSAADPTNIFNLFGLIPYDPTQIPVLGYYLVLGIWP 539 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 IIM ++M++QMK++P P D Q MI WMP++F F L+SFPAGL+IYW+W+N++S++QQ Sbjct: 540 IIMGITMWVQMKLNPAPPDPTQQMIFAWMPLLFTFMLASFPAGLVIYWAWNNLLSVIQQG 599 Query: 555 VIMKMHGAEIGLIDRL 570 IM+ +G ++ L D L Sbjct: 600 YIMRKNGVKVELFDNL 615 >gi|86747809|ref|YP_484305.1| putative inner membrane protein translocase component YidC [Rhodopseudomonas palustris HaA2] gi|86570837|gb|ABD05394.1| protein translocase subunit yidC [Rhodopseudomonas palustris HaA2] Length = 629 Score = 610 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 241/620 (38%), Positives = 357/620 (57%), Gaps = 50/620 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM---------------NNERKNIQTVKQ 45 M N N +A+ LS +++ WQ F+ P++E+ ++ T Sbjct: 1 MSDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAQQAQQQQDAAKQPTQQAPAATTPG 60 Query: 46 PNQVDN-----------------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQ 88 + R A++ SPR++++ P L G+I+LKGA+ Sbjct: 61 APNAPAASAAPGAPGAPGAPAARQSGNAPVVSREAAIAASPRIKVETPRLDGTISLKGAR 120 Query: 89 FDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISG 147 DDL+L V SP + L SPS N Y+AE +V A N++LP+ NT+W Sbjct: 121 IDDLSLTQLRETVDPKSPPIHLFSPSGGANPYYAEFGWVGAAGSNVKLPDQNTMWQQQGS 180 Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 LTP++PI L + N + F R I++D+ YLF + D VTN + P I RH Sbjct: 181 GALTPSSPITLTWDNGEGLTFRRQIAVDDRYLFTVKDDVTNVGSSPVTLYPYALISRHGT 240 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 + + EG I LG+ L E Y+ I+++ F +N+W+GI+DKYWAS +P Sbjct: 241 PHVEGYYILHEGLIGYLGEHGLQEYGYAKIDEAKTVGFKATNAWMGITDKYWASALLPDT 300 Query: 268 ETSFHSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPT--------- 317 ++F G R YQ + + T+ G ++T LFAGAKE Sbjct: 301 NAQLQARFSSNQVGATRTYQTDYLEDAKTVPIGGTVTANARLFAGAKEARVVGINFPFAG 360 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + Y + L + F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV +K+LF P Sbjct: 361 LGGYNQQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLIKVLFLP 420 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 LA K Y S A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC P+LLQI Sbjct: 421 LANKSYASMAKMKAIQPQLLALKERHPDDKAK-QQQEMMEIYRKEKINPVAGCLPVLLQI 479 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVG 491 PVFF++YKV+ +++EMRHAPF+GWI DL+AADPTN+F LFG+LPF L ++ +G Sbjct: 480 PVFFSLYKVLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLLPFDPTAIPVLGHYLVLG 539 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 +WP++M +M+ QMK++P P D Q MI WMPV+F F L+ FPAGL+IYW+W+N++S++ Sbjct: 540 VWPLVMGFTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNLLSVI 599 Query: 552 QQAVIMKMHGAEIGLIDRLR 571 QQA IM+ +G ++ L D LR Sbjct: 600 QQAYIMRRNGVKVELFDNLR 619 >gi|17984422|gb|AAL53516.1| 60 kDa inner membrane protein yidc [Brucella melitensis bv. 1 str. 16M] Length = 588 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 256/549 (46%), Positives = 359/549 (65%), Gaps = 4/549 (0%) Query: 34 NNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 + + P Q D A + R A++ SPR+E+ PSL GSINL GA+ DDL Sbjct: 39 DTPQMPANPDSIPGQGDTKAAGAPL-TRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLY 97 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+ Sbjct: 98 LKKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPS 157 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATN 212 TP+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ R ++P+ A+ Sbjct: 158 TPVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASA 217 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSF 271 T+ + EG I V+G L E KY+ IE + +F + W+GI+DKYWA+ IP ++ F Sbjct: 218 TYVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKF 277 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F+ Sbjct: 278 TGRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFD 337 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK Sbjct: 338 LLIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKL 397 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QPK+ E+REK+ Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++ Sbjct: 398 MQPKMTEIREKYADDK-MKQQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTI 456 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM + MF+QM+M+P P Sbjct: 457 EMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGIIMFLQMRMNPTP 516 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 517 PDPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLK 576 Query: 572 STFSKNYNS 580 F + Sbjct: 577 GLFRRKPKE 585 >gi|217977385|ref|YP_002361532.1| 60 kDa inner membrane insertion protein [Methylocella silvestris BL2] gi|254773006|sp|B8EPG5|OXAA_METSB RecName: Full=Inner membrane protein oxaA gi|217502761|gb|ACK50170.1| 60 kDa inner membrane insertion protein [Methylocella silvestris BL2] Length = 600 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 246/599 (41%), Positives = 353/599 (58%), Gaps = 23/599 (3%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA------- 55 + N ++AI LS +++ W + + + + Q Q ++ Sbjct: 4 DSRNLYLAIGLSCLVIVGWSYIFAPKQADRARLAQTQSQNAPAGTQPQSAATPQDAANFS 63 Query: 56 ---VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 L RA+AL+ SPR+++ P++ GS++LKGA+ DD++L+GY V NSP + LLS Sbjct: 64 PLDALPKTRAEALAASPRLKIDTPAIFGSLSLKGARLDDVSLKGYRETVDPNSPNIVLLS 123 Query: 113 PSNTKNAYFAELDYVSTANNI-ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 P +AY+AE +V +P S+TVW LTP P+ L + N ++F R Sbjct: 124 PQGAPDAYYAEAGFVPAPGEAVAVPRSDTVWT-ADRDALTPEAPVTLTYDNGQGLVFHRQ 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 I++D+ ++F I D+V N S + + + RH N + EGF+ V+GD + E Sbjct: 183 IAVDDRFMFTIKDSVENKSAKPVTLASYALVARHGLPKTVNYAVLHEGFVGVIGDAGVQE 242 Query: 232 QKYSDIEKS--SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK--YLSDGHARYQA 287 Y IEK F + WLG +DKYWA+ IP + ++F G Y+A Sbjct: 243 FHYDKIEKEDHGYKTFSGAGGWLGFTDKYWAATVIPDQAAPIEARFSANSTPSGIKTYRA 302 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F TI PG + + +FAGAKE T+ Y+ DL I +FE+LIDWGWFYFI +PMF Sbjct: 303 DFVGPVQTIAPGATTEAMSRVFAGAKEVHTLDAYQADLGIKKFELLIDWGWFYFITRPMF 362 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + Y+L GNFG+AI+L TV VK LFFPLA K Y+S A MK + P+I LREK+ + Sbjct: 363 RLLHFLYSLTGNFGVAILLATVIVKGLFFPLANKSYLSMAKMKAVAPEIAALREKYPEDK 422 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q+ + LYK INP++GC P+L+QIPVFFA+YKV+ +++EMRHAPF+GWI DL+A Sbjct: 423 -MKQQQETMALYKREKINPVSGCLPMLIQIPVFFALYKVLFVTIEMRHAPFFGWIHDLSA 481 Query: 468 ADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 DPTN+F LFG+LPF + F+ +G+WP++M +SMF+QMK +P PAD Q I Sbjct: 482 PDPTNLFNLFGLLPFDPTQLPLIGHFLAIGVWPLLMGVSMFVQMKANPEPADPMQKQIFT 541 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 WMPV+F F L FP GL+IYW+W+N++S+ QQ +IMK G ++ L D L S F K S Sbjct: 542 WMPVIFTFTLGGFPVGLVIYWTWNNILSVSQQTLIMKRAGVKVELFDNLASLFRKKVTS 600 >gi|163795447|ref|ZP_02189414.1| 60 kDa inner membrane insertion protein [alpha proteobacterium BAL199] gi|159179433|gb|EDP63964.1| 60 kDa inner membrane insertion protein [alpha proteobacterium BAL199] Length = 584 Score = 607 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 225/586 (38%), Positives = 340/586 (58%), Gaps = 23/586 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN------------------NERKNIQT 42 M N +AI LSV+I+ +Q P+I++ Sbjct: 1 MTDQKNMILAIVLSVLILLGFQFLVERPKIDQQRQQQAQQQGQTSQADGSSVPVPGQSTA 60 Query: 43 VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 P +S + R AL++SPR+ + P + GSI LKGA+ DD+ L Y + + Sbjct: 61 PSAPGAARDSAGQTAGESREAALALSPRITISTPRVQGSIALKGARIDDVVLTDYRVTID 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 SP + LL P+ K+ Y+AE +V+ + +++ +P T+W S LTP P+ L + Sbjct: 121 PKSPPIHLLDPTGLKHPYYAEFGWVAASGSSVAVPTPETIWTTDST-TLTPERPVTLSWS 179 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 N FERTI++D+ Y+F + V N S D I P G I R + + + EG + Sbjct: 180 NGQGQTFERTIAIDKDYMFTVSQRVVNKSTDAITLYPYGLISRGGTPETLDFYILHEGPL 239 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSD 280 V D +L E YSD+ + + W+GI+DKYW + +P + +++ F++ + + Sbjct: 240 GVFND-TLTEINYSDLREDGDVQRAATGGWIGITDKYWLAALVPGQGQTWNYNFRHSVRN 298 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 RYQ F +I G++ +T N LFAGAK + YE+ + F++ ID+GWFY Sbjct: 299 QSDRYQVDFLGEATSIAAGETASTENRLFAGAKLVKVLDRYEEQYGVANFDLAIDFGWFY 358 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ KP F ++++ + L+GNFG+AI+ T+ VKLLFFPLA K Y S A MK + PK+ E+R Sbjct: 359 FLTKPFFYVLTWLHALLGNFGLAILGLTICVKLLFFPLANKSYASMAKMKALTPKLQEMR 418 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK Q L M+ LYK +NP AGC PI++QIPVFFA+YK + +++EMRHAPF+G Sbjct: 419 EKHGDD-RQRLNDEMMALYKREKVNPAAGCLPIVIQIPVFFALYKTLFVNIEMRHAPFYG 477 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WIKDL+A DPT IF L G++P+ P F+ +GIWP++M ++MF+Q K++P PAD QA I Sbjct: 478 WIKDLSAPDPTTIFNLLGVIPWDPPQFLMIGIWPVLMGITMFLQQKLNPAPADPVQAKIF 537 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 ++P++F F L F AGL+IYW+W+N++SI QQ +IM+ G + L Sbjct: 538 MFLPLMFTFLLGHFAAGLVIYWTWNNLLSITQQWIIMRRMGIKKVL 583 >gi|91974551|ref|YP_567210.1| putative inner membrane protein translocase component YidC [Rhodopseudomonas palustris BisB5] gi|91681007|gb|ABE37309.1| protein translocase subunit yidC [Rhodopseudomonas palustris BisB5] Length = 621 Score = 603 bits (1556), Expect = e-170, Method: Composition-based stats. Identities = 243/621 (39%), Positives = 363/621 (58%), Gaps = 42/621 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL--- 57 M N N +A+ LS +++ WQ F+ P++E+ ++ Q + Q A Sbjct: 1 MTDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAQQAQQQQEAAKQQTPPAATTPGAP 60 Query: 58 ---------------------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 + R A++ SPR++++ P L G+++LKGA+ DDL+L Sbjct: 61 NAPAAPGAPGAPANQPAANAPVVSRDAAIAASPRIKVETPRLDGTLSLKGARIDDLSLSQ 120 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTP 155 YH V S + L SPS + N Y+AE +V A N++LP+ NT+W LTP P Sbjct: 121 YHETVDPKSAPIHLFSPSGSANPYYAEFGWVGAAGSNVKLPDQNTLWEQEGSGALTPANP 180 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + L + N + F R I++D+ YLF I D VTN + P I RH + Sbjct: 181 VTLKWDNGEGLTFRRQIAVDDRYLFTIKDDVTNVGGGPVTLYPFALISRHGTPHVEGFYI 240 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 + EG I LG++ L E Y+ I+++ F +N+W+GI+DKYWAS +P ++F Sbjct: 241 LHEGLIGYLGEQGLQEYGYAKIDEAKTVGFKATNAWMGITDKYWASALLPDTNAQLQARF 300 Query: 276 KYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYEKDL 325 G R YQ + + T+ G + T T LFAGAKE + Y + L Sbjct: 301 SSNQVGATRTYQTDYLEDAKTVPIGGTATATARLFAGAKEARVVGINFPFAGLGGYNQQL 360 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 + F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV VKL+F PLA K Y S Sbjct: 361 GLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLIFLPLANKSYAS 420 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC P+LLQIPVFF++YK Sbjct: 421 MAKMKAIQPQLLALKERHPDDKAK-QQQEMMEIYRKEKINPVAGCLPVLLQIPVFFSLYK 479 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSL 499 V+ +++EMRHAPF+GWI DL+AADPTN+F LFG++P+ + ++ +G+WP++M Sbjct: 480 VLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLIPYDPSTLPVIGSYLVLGVWPLVMGF 539 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +M+ QMK++P P D Q MI WMPV+F F L+ FPAGL+IYW+W+N +S++QQA IM+ Sbjct: 540 TMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVIQQAYIMRR 599 Query: 560 HGAEIGLIDRLRSTFSKNYNS 580 +G ++ L D L+S K + Sbjct: 600 NGVKVELWDNLKSAVVKPKKT 620 >gi|144899247|emb|CAM76111.1| 60 kDa inner membrane insertion protein [Magnetospirillum gryphiswaldense MSR-1] Length = 575 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 224/577 (38%), Positives = 340/577 (58%), Gaps = 15/577 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ-TVKQPNQVD-------NS 52 M N F+AIALSV+I++ +Q + + T P D + Sbjct: 1 MNEQRNLFLAIALSVLILFGFQWLFPSKTPAPESAPATTAAGTPPVPTSGDAVVPAPVQT 60 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A + + R AL+ + R+ + P+L GS+++ GA+ DDL L GYH S + LLS Sbjct: 61 AAQMAVKSRTDALATAKRIRINTPTLHGSLSVTGARLDDLTLAGYHETADPTSKEIELLS 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 P+ + Y AE +V ++ P +TVW++ G L+P + + L + N + + F RT+ Sbjct: 121 PTGAAHPYHAEFGWVPVDAGVKTPGPDTVWSVAQGNELSPGSTVVLNWDNGDGLRFVRTV 180 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 S+DE+Y+F+I V N + P G I R + + EG + V D +L E Sbjct: 181 SVDENYMFQIAQRVENYGTKPVTLHPFGLISRTGTPKTEGMYILHEGPLGVF-DGTLKEH 239 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSA 291 KY D++K S + W+GI+DKYW + +P ++ +F + +D RYQ F+ Sbjct: 240 KYDDLKKLSTERNKTTGGWIGITDKYWLTALVPDQKEELTGRFVHQRADNADRYQVDFTG 299 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + PG + TT LFAGAK + HY + + RF++ ID+GWFYF+ KP F L+ Sbjct: 300 AAKVVAPGAAAETTFHLFAGAKLVSLLDHYTEKFGVERFDLAIDFGWFYFLTKPFFYLLK 359 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + +GN G+AI+ TV +K + FPLA K Y S + MK +QP++ L+E+F + L Sbjct: 360 MMNSGLGNMGLAILALTVLIKGIMFPLANKSYASMSKMKLLQPQVKALQERFGDDKVR-L 418 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ M+ LYK +NP++GC PIL+QIPVFFA+YKV+ +++EMRHAPF+GWIKDL+A DPT Sbjct: 419 QQEMMALYKKEKVNPVSGCLPILIQIPVFFALYKVLFVAIEMRHAPFYGWIKDLSAQDPT 478 Query: 472 NIFTLFGILPF----YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 I LFG++P+ YLP F+H+G+WP+IM +M++Q K++P P D QA ++ ++PVVF Sbjct: 479 TIMNLFGLIPWDPALYLPAFLHIGVWPLIMGATMWLQQKLNPQPLDPVQAKMMMFLPVVF 538 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 F L F AGL+IYW+WSN++SI QQ VIM+ +G + Sbjct: 539 TFMLGQFAAGLVIYWAWSNILSIAQQWVIMRKYGVKP 575 >gi|89068160|ref|ZP_01155577.1| putative inner membrane protein translocase component YidC [Oceanicola granulosus HTCC2516] gi|89046399|gb|EAR52456.1| putative inner membrane protein translocase component YidC [Oceanicola granulosus HTCC2516] Length = 597 Score = 600 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 212/594 (35%), Positives = 342/594 (57%), Gaps = 28/594 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEE----------MNNERKNIQTVKQPNQVDN 51 ++N N +A ALS I++ W + P ++ + +D Sbjct: 3 DQNKNLILATALSFIVILIWFVLFPPPEQAPGLTNAEGEVVAQDDTALRDEMSPDGAIDG 62 Query: 52 SYAAVLIDDRAQ-ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + A + Q A + RV ++ P L+GSIN G + DDL L YH + +SP+V L Sbjct: 63 TAAGTPVATLEQDAPVEAARVAIETPRLVGSINTAGGRIDDLKLTAYHETLDPDSPLVRL 122 Query: 111 LSPSNTKNAYFAELDYV--STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 LSP + Y+A ++ S A+ E+P +TVW + G+ LTP +P+ L ++N ++F Sbjct: 123 LSPGGEEAQYYALHGWIALSGASADEVPGDSTVWEIEEGETLTPDSPVVLRWENGAGLVF 182 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 +TI++D++YLF + +V N + D + P G++ RH + F + EG + + D Sbjct: 183 RKTIAVDDNYLFTVTQSVENTTGDAVELRPYGQVRRHGLPDSRQFFILHEGVVR-MADGE 241 Query: 229 LVEQKYSDIEKSSISNFH---ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 L E Y D+ + + W+G +DKYW + +P+ T F S + + + Y Sbjct: 242 LEEIDYDDLPDLTAEESRIEVAEDGWVGFTDKYWMTTLVPASGTPFRSVAREV---NGIY 298 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + G++++ + +FAGAKE+ TI YE I RF IDWGWF+F+ KP Sbjct: 299 LTESIYPPVAVAAGETVSAESHVFAGAKEWETIRAYEAA-GIDRFVDSIDWGWFFFLTKP 357 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++GN G +I++ T+ +K + FPLA K Y S A MK +QP++++L+E+ Sbjct: 358 IFALLHWLNGVIGNMGWSIIVLTLIIKAVLFPLAYKSYASMAKMKELQPEMEKLKER-AG 416 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q LQK M++LYKT+ +NP +GC PILLQIP+FF++YKVI ++LE+RHAP+ GWI+DL Sbjct: 417 DDRQALQKGMMELYKTNKVNPASGCLPILLQIPIFFSLYKVIFVTLELRHAPWIGWIRDL 476 Query: 466 AAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 +A DP++I LFG+LP+ P +G+ PI++ +SM++Q K++P P D Q MI Sbjct: 477 SAPDPSSILNLFGLLPWDTPDPGSIFFIFSLGVLPILLGISMWLQQKLNPAPPDPTQRMI 536 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 WMP VF+F L SF +GL+IYW +N+I+ QQ +IM+ HG + ++ +R Sbjct: 537 FAWMPWVFMFMLGSFASGLVIYWIANNMITFTQQYLIMRSHGYKPDILGNIRGK 590 >gi|260577136|ref|ZP_05845113.1| 60 kDa inner membrane insertion protein [Rhodobacter sp. SW2] gi|259020610|gb|EEW23929.1| 60 kDa inner membrane insertion protein [Rhodobacter sp. SW2] Length = 646 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 220/599 (36%), Positives = 339/599 (56%), Gaps = 23/599 (3%) Query: 1 ME-RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ +N N +A ALS +++ W + P N T V Sbjct: 1 MDGQNKNLILATALSFLVILVWFVLFPPPEPVVDPNAPAISATEALTPPV-ADQTTAATT 59 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + A A+ +PR+ + P L GSI++ G + DDL+L+GY + S IV LLSP +A Sbjct: 60 EPAAAVPETPRLTIDTPLLQGSISMLGGRIDDLSLKGYKESLDPASDIVRLLSPVGKDSA 119 Query: 120 YFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y+A + + N ++P +NT W L +G L P P+ L + N + F RTI++D+H Sbjct: 120 YYALYGWAPGGDLANEDVPGANTEWKLAAGTSLAPGQPVTLAWDNGKGLNFTRTIAIDDH 179 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y+F + V N + ++R +P G + RH KP N + + EG + D L E KY D Sbjct: 180 YMFTVTQGVENTTGAEVRLAPYGIVARHGKPAGLQNFYVLHEGVVGRT-DGKLEEVKYKD 238 Query: 237 IEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + ++ W+G +DKYW + IP++ F S KY++ YQ Sbjct: 239 LVDLPVVEREGAQAEVVEATTDGWIGFTDKYWMTTLIPAQGKPFTSVTKYVASA-DIYQV 297 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + PG TT+ LFAGAKE+ TI Y+ D +P F IDWGWF+F+ KPMF Sbjct: 298 ETREPVLVVAPGAKAETTSRLFAGAKEWATIRGYQNDAGVPGFIDSIDWGWFFFLTKPMF 357 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ L+GN G+AI+ T+ +K++ FPLA K YVS A MK +QP+I+ ++E+ Sbjct: 358 WVLHNLNALIGNMGLAIIGLTLVLKVIVFPLAYKSYVSMARMKELQPEIEAMKERVGDDK 417 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q +Q M++LYK +NP AGC P+L+QIP+FF++YKVI ++LE+RHAPF+GW+ DL+A Sbjct: 418 -QKVQVEMMKLYKEKKVNPAAGCLPVLIQIPIFFSLYKVIFVTLELRHAPFFGWLTDLSA 476 Query: 468 ADPTNIFTLFGILPFYLPGF------MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 D +++F FG+ P+ P + +G+ PI++ +SM++Q K++P PAD Q MI Sbjct: 477 RDSSSLFNFFGLAPWAAPEHGTLLATIFIGLLPILLGISMWLQQKLNPAPADPTQQMIFA 536 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 WMP VF+F L SF +GL++YW +NVI+ QQ +IM+ HG + ++S F K + Sbjct: 537 WMPWVFMFMLGSFASGLVLYWITNNVITFTQQYIIMRSHGHHPDIFGNIKSGFKKKPAA 595 >gi|148258511|ref|YP_001243096.1| putative inner membrane protein translocase component YidC [Bradyrhizobium sp. BTAi1] gi|146410684|gb|ABQ39190.1| protein translocase subunit yidC [Bradyrhizobium sp. BTAi1] Length = 621 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 257/620 (41%), Positives = 367/620 (59%), Gaps = 44/620 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK-----------NIQTVKQPNQV 49 M N N +A+ LS +++ WQ FY P++E+ + + +Q P+ Sbjct: 1 MTDNRNTILAVILSGLVLILWQVFYNGPQMEKQRAQAQMQAELAKKQAPAVQPEATPSAT 60 Query: 50 DNSYAAVL---------------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 AA + R A++ +PRV++ P L GSI+LKGA+ DDL Sbjct: 61 PQPNAAASGSPSAPGGAATTATGVVARDAAIAATPRVKIDTPRLSGSISLKGARIDDLAF 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANN-IELPNSNTVWNLISGKILTPT 153 Y V SP + L SPSNT Y+AE +V +++P+ NTVW LTPT Sbjct: 121 VQYRETVDPKSPAIVLFSPSNTAEPYYAEFGWVGAPGAKVQVPDQNTVWQQDGTNALTPT 180 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 TP+KL NA+ + F+RTIS+DEHYLF I D VTN + P G I RH + Sbjct: 181 TPVKLSTTNADGLTFKRTISVDEHYLFTIKDEVTNAGSAPVTLYPFGLISRHGTPHVSGY 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + + EG I LG+K L E Y ++ + F +N WLGI+DKYWA+ +P + + Sbjct: 241 YILHEGLIGYLGEKGLQEYTYKKMDDDKAAKFDVTNGWLGITDKYWATALLPMTDARLTA 300 Query: 274 QF-KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYEK 323 + L D RYQ + T+ G + + + LFAGAKE + Y + Sbjct: 301 NYSSKLVDNQHRYQTDYVETPQTVPAGGAASVSTRLFAGAKEAGVVGINFPIGGLGGYNQ 360 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 L + F++LIDWGWFYF+ KPMF+ + +F+ GNFGI+I+L TV VKLLFFPLA K Y Sbjct: 361 QLGLNHFDLLIDWGWFYFLTKPMFLALDFFFRFFGNFGISILLVTVLVKLLFFPLANKSY 420 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S A MK IQP++ L+E++ Q+ M+++YK INP+AGC P++LQIPVFF++ Sbjct: 421 ASMAKMKAIQPQLQALKERYPDD-RMKQQQEMMEIYKKEKINPVAGCLPVVLQIPVFFSL 479 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIM 497 YKV+ +++EMRHAPF+GWIKDL+A DPTN+FTLFG++PF ++ +GIWPIIM Sbjct: 480 YKVLFVTIEMRHAPFYGWIKDLSAPDPTNLFTLFGLIPFDPTQLPLFGHYLALGIWPIIM 539 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++M++QMK++P P D QAMI NWMP++F F L+ FPAGL+IYW+W+N +S++QQ IM Sbjct: 540 GITMWVQMKLNPAPPDPTQAMIFNWMPIIFTFMLAGFPAGLVIYWAWNNTLSVLQQGFIM 599 Query: 558 KMHGAEIGLIDRLRSTFSKN 577 + +G ++ L D +R TF K Sbjct: 600 RRNGVKVELFDNIRGTFKKK 619 >gi|146278901|ref|YP_001169060.1| putative inner membrane protein translocase component YidC [Rhodobacter sphaeroides ATCC 17025] gi|145557142|gb|ABP71755.1| protein translocase subunit yidC [Rhodobacter sphaeroides ATCC 17025] Length = 628 Score = 597 bits (1540), Expect = e-168, Method: Composition-based stats. Identities = 222/607 (36%), Positives = 335/607 (55%), Gaps = 30/607 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 ++N N +A LS +++ W + P + A + Sbjct: 6 DQNKNLILATGLSFLVIMVWFFLFPPPEAVTQDEPATVATQETALAPSATPDAPMTAVPP 65 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 L +PRV + P L GSI++ G + DDL+L+ YH + S IV LLSP NAY+ Sbjct: 66 DAELPETPRVAIDTPRLQGSISMLGGRIDDLSLKSYHETLDPGSQIVRLLSPVGEPNAYY 125 Query: 122 AELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 A + + ++P +NT W + G L P+ L + N ++F RTIS+D+HY+ Sbjct: 126 ALYGWTPAGALDYEDVPGANTTWTQVGGATLGVDQPVTLEWDNGQGLVFTRTISVDDHYM 185 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 F I TV N + + +R +P G + RH KP N F + EG + D L E Y DI Sbjct: 186 FTISQTVENRTGEAVRLAPYGIVARHGKPLNLQNFFVLHEGAVGR-ADGELTETNYDDIA 244 Query: 239 KSSISNFHE---------SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + + W+G +DKYW + IP + F S KY+ G YQA+ Sbjct: 245 ELPQVAREGALAEVVEAQQDGWIGFTDKYWMTTLIPQQGQPFSSVTKYV-PGADIYQAET 303 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWGWFY 340 +T+ PG + ++ LFAGAKE+ I Y+ + A IP F IDWGWF+ Sbjct: 304 REQLVTVAPGGTAEVSSRLFAGAKEWEAIRAYQNEGAIEPTEGAEPIPGFIDSIDWGWFF 363 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ KP+F ++ + ++GN G+AI+ T +K L PLA K YVS A MK +QP+++ LR Sbjct: 364 FLTKPIFAVLHWLNQMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELEALR 423 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ + ++Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+RHAPF+G Sbjct: 424 ERAGEDK-MLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAPFFG 482 Query: 461 WIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 W+ DL+A DP++IF FG+ P+ P + +GI PI++ +SM++Q K++P P DK Sbjct: 483 WLTDLSAPDPSSIFNFFGLAPWAAPTPGSTMALIFIGILPILLGISMWLQQKLNPAPTDK 542 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 QAMI WMP VF+F L F +GL++YW +NVI+ QQ VIM+ HG L +++ F Sbjct: 543 AQAMIFAWMPWVFMFMLGHFASGLVLYWIVNNVITFSQQYVIMRSHGHHPDLFGNIKAGF 602 Query: 575 SKNYNSQ 581 S+ +Q Sbjct: 603 SRKSAAQ 609 >gi|332559538|ref|ZP_08413860.1| membrane protein insertase [Rhodobacter sphaeroides WS8N] gi|332277250|gb|EGJ22565.1| membrane protein insertase [Rhodobacter sphaeroides WS8N] Length = 623 Score = 595 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 221/608 (36%), Positives = 339/608 (55%), Gaps = 33/608 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER-KNIQTVKQPNQVDNSYAAVLIDD 60 ++N N +A LS +++ W + P QT P+ ++ + D Sbjct: 3 DQNKNLILATGLSFLVIMVWFFLFPPPEAVTEGEPTVATQQTAVAPSATPDAPTTAVPPD 62 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 L + RV + P L GSI++ G + DDL+L+ YH + S IV LLSP NAY Sbjct: 63 AE--LPETQRVVIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPNAY 120 Query: 121 FAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 +A + ++P +NT W + L P+ L + N ++F RTIS+D+HY Sbjct: 121 YALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDDHY 180 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 +F + TV NNS ++ +P G + RH KP N F + EG + D L E KY + Sbjct: 181 MFSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVGR-ADGKLTETKYDKV 239 Query: 238 EKSSISNFHE---------SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + W+G +DKYW + IP + F S KY+ G YQA+ Sbjct: 240 AELPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYV-PGADIYQAE 298 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWGWF 339 +T+ PG + ++ LFAGAKE+ TI Y+ + A IP F IDWGWF Sbjct: 299 TREQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWGWF 358 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +F+ KP+F ++ + +++GN G+AI+ T +K L PLA K YVS A MK +QP+++ L Sbjct: 359 FFLTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELEAL 418 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+ ++Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+RHAPF+ Sbjct: 419 RER-AGDDKMLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAPFF 477 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 GW+KDL+A DP++IF FG+ P+ P + +G PI++ +SM++Q K++P P D Sbjct: 478 GWLKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAPGD 537 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K QAMI WMP VF+F L F +GL++YW +N+I+ QQ VIM+ HG + ++++ Sbjct: 538 KAQAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIKAS 597 Query: 574 FSKNYNSQ 581 FS+ +Q Sbjct: 598 FSRKPAAQ 605 >gi|300024925|ref|YP_003757536.1| membrane protein insertase, YidC/Oxa1 family [Hyphomicrobium denitrificans ATCC 51888] gi|299526746|gb|ADJ25215.1| membrane protein insertase, YidC/Oxa1 family [Hyphomicrobium denitrificans ATCC 51888] Length = 624 Score = 595 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 250/604 (41%), Positives = 360/604 (59%), Gaps = 32/604 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYP-------------RIEEMNN------ERKNIQT 42 ++N N A+ALS++++ WQ F+ P +IE N T Sbjct: 9 DQN-NLMFAVALSILVLMGWQYFFARPELQNEHARQEFNKKIEAQNKDGSSETPPNVAST 67 Query: 43 VKQPNQVDNS----YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 P D A R AL S R++++ PSL GSI+LKG + DDL L Y Sbjct: 68 PVAPPSTDAPTGAQAPATAPVSREAALQGSQRLKIETPSLEGSIDLKGGRLDDLVLMKYR 127 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI-ELPNSNTVWNLISGKILTPTTPIK 157 V NS V LLSPS + YFAE +V + + ++P +++W + SG LTP TP+ Sbjct: 128 ETVDPNSARVILLSPSGSPEPYFAEYGWVPQSGSAVKVPTRDSLWTVESGTRLTPETPVT 187 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 L++ N ++F RT+S+D Y+FKI D + N + ++ P R+ R + + + Sbjct: 188 LMWDNGGGLVFHRTVSVDNDYMFKIKDEIENKTQAEVTLLPYARVHRSGHPPSQAFYVLH 247 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNF--HESNSWLGISDKYWASVFIPSKETSFHSQF 275 EG + V GD L E ++D KS + + + WLGI+DKYWA+ +P + + + + Sbjct: 248 EGLVGVSGDHGLQEFTFADALKSGVPTTFDNVTGGWLGITDKYWATALVPEQSEPYRAMY 307 Query: 276 KYLSD----GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 L G +Q + +++ G LFAGAK+ I YE L I RF+ Sbjct: 308 SALKARDPAGKDAFQTDYLRGALSVPAGLRKGVEGHLFAGAKQASLIDGYENALGILRFD 367 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +IDWGWFYFI +P+F LM + LV NFGI I++ TV VK F+PLA KQY S A MK Sbjct: 368 RMIDWGWFYFITRPLFRLMEFINGLVHNFGITILILTVLVKAAFYPLANKQYESMARMKK 427 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ ++E++K Q QK + +LY+T INPLAGCWPILLQIPVFFA+YKV+ +++ Sbjct: 428 LQPEMQRIKEQYKDD-TQRQQKEIFELYRTQKINPLAGCWPILLQIPVFFALYKVLFVTI 486 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 +MRHAPF+GWI DL+A DPT++F LFG+LPF P F+H+G+WP+IM ++M++QM+++PP Sbjct: 487 DMRHAPFFGWIHDLSAPDPTSLFNLFGLLPFDSPTFLHIGVWPLIMGVTMWMQMQLNPPQ 546 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D Q I WMPVVF F L+SFPAGL+IYW+WSN +SI+QQ I K +GAE+ L+D ++ Sbjct: 547 PDPIQQQIFQWMPVVFTFMLASFPAGLVIYWAWSNTLSILQQVRINKKNGAEVHLLDNIK 606 Query: 572 STFS 575 TF Sbjct: 607 RTFR 610 >gi|221640557|ref|YP_002526819.1| putative inner membrane protein translocase component YidC [Rhodobacter sphaeroides KD131] gi|254773018|sp|B9KNZ6|OXAA_RHOSK RecName: Full=Inner membrane protein oxaA gi|221161338|gb|ACM02318.1| Inner membrane protein oxaA [Rhodobacter sphaeroides KD131] Length = 623 Score = 595 bits (1533), Expect = e-167, Method: Composition-based stats. Identities = 221/608 (36%), Positives = 339/608 (55%), Gaps = 33/608 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER-KNIQTVKQPNQVDNSYAAVLIDD 60 ++N N +A LS +++ W + P QT P+ ++ + D Sbjct: 3 DQNKNLILATGLSFLVIMVWFFLFPPPEAVTEGEPTVATQQTAVAPSATPDAPTTAVPPD 62 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 L + RV + P L GSI++ G + DDL+L+ YH + S IV LLSP NAY Sbjct: 63 AD--LPETRRVAIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPNAY 120 Query: 121 FAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 +A + ++P +NT W + L P+ L + N ++F RTIS+D+HY Sbjct: 121 YALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDDHY 180 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 +F + TV NNS ++ +P G + RH KP N F + EG + D L E KY + Sbjct: 181 MFSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVGR-ADGKLTETKYDKV 239 Query: 238 EKSSISNFHE---------SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + W+G +DKYW + IP + F S KY+ G YQA+ Sbjct: 240 AELPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYV-PGADIYQAE 298 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWGWF 339 +T+ PG + ++ LFAGAKE+ TI Y+ + A IP F IDWGWF Sbjct: 299 TREQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWGWF 358 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +F+ KP+F ++ + +++GN G+AI+ T +K L PLA K YVS A MK +QP+++ L Sbjct: 359 FFLTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELEAL 418 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+ ++Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+RHAPF+ Sbjct: 419 RER-AGDDKMLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAPFF 477 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 GW+KDL+A DP++IF FG+ P+ P + +G PI++ +SM++Q K++P P D Sbjct: 478 GWLKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAPGD 537 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K QAMI WMP VF+F L F +GL++YW +N+I+ QQ VIM+ HG + ++++ Sbjct: 538 KAQAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIKAS 597 Query: 574 FSKNYNSQ 581 FS+ +Q Sbjct: 598 FSRKPAAQ 605 >gi|77464645|ref|YP_354149.1| putative inner membrane protein translocase component YidC [Rhodobacter sphaeroides 2.4.1] gi|123590899|sp|Q3IYY6|OXAA_RHOS4 RecName: Full=Inner membrane protein oxaA gi|77389063|gb|ABA80248.1| protein translocase subunit yidC [Rhodobacter sphaeroides 2.4.1] Length = 623 Score = 594 bits (1532), Expect = e-167, Method: Composition-based stats. Identities = 221/608 (36%), Positives = 339/608 (55%), Gaps = 33/608 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER-KNIQTVKQPNQVDNSYAAVLIDD 60 ++N N +A LS +++ W + P QT P+ ++ + D Sbjct: 3 DQNKNLILATGLSFLVIMVWFFLFPPPEAVTEGEPTVATQQTAVAPSATPDAPTTAVPPD 62 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 L + RV + P L GSI++ G + DDL+L+ YH + S IV LLSP NAY Sbjct: 63 AD--LPETQRVVIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPNAY 120 Query: 121 FAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 +A + ++P +NT W + L P+ L + N ++F RTIS+D+HY Sbjct: 121 YALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDDHY 180 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 +F + TV NNS ++ +P G + RH KP N F + EG + D L E KY + Sbjct: 181 MFSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVGR-ADGKLTETKYDKV 239 Query: 238 EKSSISNFHE---------SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + W+G +DKYW + IP + F S KY+ G YQA+ Sbjct: 240 AELPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYV-PGADIYQAE 298 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWGWF 339 +T+ PG + ++ LFAGAKE+ TI Y+ + A IP F IDWGWF Sbjct: 299 TREQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWGWF 358 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +F+ KP+F ++ + +++GN G+AI+ T +K L PLA K YVS A MK +QP+++ L Sbjct: 359 FFLTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELEAL 418 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+ ++Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+RHAPF+ Sbjct: 419 RER-AGDDKMLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAPFF 477 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 GW+KDL+A DP++IF FG+ P+ P + +G PI++ +SM++Q K++P P D Sbjct: 478 GWLKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAPGD 537 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K QAMI WMP VF+F L F +GL++YW +N+I+ QQ VIM+ HG + ++++ Sbjct: 538 KAQAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIKAS 597 Query: 574 FSKNYNSQ 581 FS+ +Q Sbjct: 598 FSRKPAAQ 605 >gi|126463485|ref|YP_001044599.1| putative inner membrane protein translocase component YidC [Rhodobacter sphaeroides ATCC 17029] gi|166977405|sp|A3PNB1|OXAA_RHOS1 RecName: Full=Inner membrane protein oxaA gi|126105149|gb|ABN77827.1| protein translocase subunit yidC [Rhodobacter sphaeroides ATCC 17029] Length = 623 Score = 594 bits (1532), Expect = e-167, Method: Composition-based stats. Identities = 222/608 (36%), Positives = 341/608 (56%), Gaps = 33/608 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPR-IEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ++N N +A LS +++ W + P + E QT P+ ++ + D Sbjct: 3 DQNKNLILATGLSFLVIMVWFFLFPPPEAVTEGETTVATQQTAVAPSATPDAPTTAVPPD 62 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 L + RV + P L GSI++ G + DDL+L+ YH + S IV LLSP NAY Sbjct: 63 AE--LPETQRVVIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPNAY 120 Query: 121 FAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 +A + ++P +NT W + L P+ L + N ++F RTIS+D+HY Sbjct: 121 YALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDDHY 180 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 +F + TV NNS ++ +P G + RH KP N F + EG + D L E KY + Sbjct: 181 MFSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVGR-ADGKLTETKYDKV 239 Query: 238 EKSSISNFHE---------SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + W+G +DKYW + IP + F S KY+ G YQA+ Sbjct: 240 AELPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYV-PGADIYQAE 298 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWGWF 339 +T+ PG + ++ LFAGAKE+ TI Y+ + A IP F IDWGWF Sbjct: 299 TREQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWGWF 358 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +F+ KP+F ++ + +++GN G+AI+ T +K L PLA K YVS A MK +QP+++ L Sbjct: 359 FFLTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELEAL 418 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+ ++Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+RHAPF+ Sbjct: 419 RER-AGDDKMLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAPFF 477 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 GW+KDL+A DP++IF FG+ P+ P + +G PI++ +SM++Q K++P P D Sbjct: 478 GWLKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAPGD 537 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K QAMI WMP VF+F L F +GL++YW +N+I+ QQ VIM+ HG + ++++ Sbjct: 538 KAQAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIKAS 597 Query: 574 FSKNYNSQ 581 FS+ +Q Sbjct: 598 FSRKPAAQ 605 >gi|23015970|ref|ZP_00055732.1| COG0706: Preprotein translocase subunit YidC [Magnetospirillum magnetotacticum MS-1] Length = 578 Score = 594 bits (1531), Expect = e-167, Method: Composition-based stats. Identities = 221/580 (38%), Positives = 337/580 (58%), Gaps = 19/580 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRI-----------EEMNNERKNI---QTVKQP 46 M N FVAIA+SV I+ WQ F+ + E + N+ T P Sbjct: 1 MNDQRNLFVAIAISVAILIGWQYFFPTAKPPVEQAAQQQAAEVKASAPANVPSPATASSP 60 Query: 47 NQVDNSYAAVLID--DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 QV + AA R +AL S R+ ++ PS+ GSI L GA+ DD+ L Y +++ Sbjct: 61 AQVPGTPAAAAQTGASRNEALGKSRRIAIQTPSMHGSIALTGARIDDITLVKYRETPAAD 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 S + L+SP+ + Y+AE +V+T N+++P +VW LT +P+ L + N Sbjct: 121 SAEIDLMSPAESPEPYWAEFGWVATDANVKVPGPESVWQAQGTGPLTQASPVVLTWDNGE 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RT ++DE+Y+F + V N P + R + + EG + V Sbjct: 181 GLRFVRTYTVDENYMFGVTQRVENYGTKAASLHPYALLARTGTPHVAGMYILHEGPLGVF 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH-A 283 D +L E KY D++K + + + W GI+DKYW + +P +T +F + G+ Sbjct: 241 -DGTLKEMKYDDLKKEGSARYKTTGGWAGITDKYWLTALVPPAKTEITGRFVHQRLGNAD 299 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 RYQ + A I GK+ LF GAK+ + Y + I RF++ ID+GWFYF+ Sbjct: 300 RYQVDYLAPARVIEAGKTEEAGFHLFTGAKQVSLLDGYGEKFGIDRFDLAIDFGWFYFLT 359 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP F L+ ++ +GN G+AI+ TV +KL FPLA K YV+ MK +QPK+ EL+ ++ Sbjct: 360 KPFFYLLQMLHSALGNMGLAILALTVILKLAMFPLANKSYVAMGKMKKLQPKVQELQARY 419 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 LQ+ M+ LYK +NP++GC PI++QIPVFFA+YKV+ +++EMRHAPF+GWI Sbjct: 420 ADDK-MRLQQEMMALYKAEKVNPVSGCLPIMVQIPVFFALYKVLFVTIEMRHAPFYGWIS 478 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+A DPTNIFTLFG++P+ P MH+G+WP+IM ++M++Q K++P P D QA ++ ++ Sbjct: 479 DLSAQDPTNIFTLFGLIPWTPPHIMHLGVWPLIMGITMYLQQKLNPQPTDPVQAKMMQFL 538 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P++F F L++F +GL+IYW+WSN +SI+QQ VIMK + Sbjct: 539 PLIFTFLLANFASGLVIYWAWSNTLSILQQWVIMKRAEEK 578 >gi|84499797|ref|ZP_00998085.1| putative inner membrane protein translocase component YidC [Oceanicola batsensis HTCC2597] gi|84392941|gb|EAQ05152.1| putative inner membrane protein translocase component YidC [Oceanicola batsensis HTCC2597] Length = 608 Score = 594 bits (1531), Expect = e-167, Method: Composition-based stats. Identities = 212/611 (34%), Positives = 343/611 (56%), Gaps = 38/611 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA------- 54 ++N N +A LS I++ W F ++P E +++ +Q D + Sbjct: 3 DQNKNLILATVLSFIVIVVW--FLLFPPPERVDDPNAPATGETAQSQADGTAPMTPGADT 60 Query: 55 ---AVLIDDRAQALS---MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A + D A A + +PR+ + P L GSINL+G + DDL L+ Y + +++ V Sbjct: 61 REGASVPSDAAPASADTEEAPRLGIDTPRLAGSINLRGGRIDDLKLKDYLTSLDADATRV 120 Query: 109 TLLSPSNTKNAYFAELDYV--STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 T+L P + ++ ++A ++ S A+ +P +TVW++ LTP TP+ + ++N + Sbjct: 121 TVLRPEDQRDPFYALYGWIPVSGADAGAMPAEDTVWSVEGTPTLTPETPVTMTWENDAGL 180 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLG 225 +F RT+ +D Y+F + TV N + + P + RH P F + EG I + Sbjct: 181 IFRRTVGIDTDYMFTVRQTVENTGENPVALRPYSVLRRHGIPSDLKKFFVLHEGLIR-MS 239 Query: 226 DKSLVEQKYSDIEKSSISNFHE---------SNSWLGISDKYWASVFIPSKETSFHSQFK 276 D L E+ Y ++E + + W G +D YW S IP +T+F S K Sbjct: 240 DGELQEESYGNLEDFDVDGREGVPAERIEVQESGWTGFTDHYWMSTIIP--DTAFRSTAK 297 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 Y G + +Q + I PG S + LFAGAKE+ TI Y+ D + RF IDW Sbjct: 298 YF-PGRSIFQTDAVLPAVEIAPGASASVDTRLFAGAKEWETIKEYQNDHGVTRFLDAIDW 356 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GWF+F+ KP+F ++ + + +GN G +I+ TV +K++ FPLA K Y S A M+ +QP++ Sbjct: 357 GWFFFLTKPIFAVLHWLNSHIGNMGWSIIALTVLLKMVLFPLAYKSYASMAKMRELQPEM 416 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++++E+ Q LQK M++LYK +NP +GC PILLQIP+FF++YKVI ++LE+RHA Sbjct: 417 EKIKER-AGDDRQKLQKEMMELYKKEKVNPASGCLPILLQIPIFFSLYKVIFVTLELRHA 475 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPP 510 P+ GWI DL+A DP++I LFG+LP P + +G+ PI++ +SM++Q K++P Sbjct: 476 PWIGWIHDLSAPDPSSILNLFGLLPIATPDPDSFLAIISLGVLPILLGVSMWLQQKLNPA 535 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D Q MI WMP VF+F L +F +GL++YW +NVI+ +QQ IM+ HG + + + Sbjct: 536 PTDPTQQMIFAWMPWVFMFMLGTFASGLVLYWITNNVITFMQQYAIMRSHGFKPDVFGNI 595 Query: 571 RSTFSKNYNSQ 581 R + ++ ++ Sbjct: 596 RKSLTRKKKAE 606 >gi|126737055|ref|ZP_01752790.1| putative inner membrane protein translocase component YidC [Roseobacter sp. SK209-2-6] gi|126721640|gb|EBA18343.1| putative inner membrane protein translocase component YidC [Roseobacter sp. SK209-2-6] Length = 601 Score = 593 bits (1530), Expect = e-167, Method: Composition-based stats. Identities = 221/602 (36%), Positives = 334/602 (55%), Gaps = 26/602 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPR----IEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ++N N +A LS +++ W F+ P ++ E D + A Sbjct: 3 DQNKNLILATVLSFLVILGWYTFFPPPEPEQPVDVAVTENAAESGTTLVPTADATDAVAN 62 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + +PR+ + P + GSI L+G + DDL+L+ Y ++ SPIV LL P Sbjct: 63 ATTEEASAPDAPRLAIDTPRVTGSIALQGGRIDDLSLKDYRETLADGSPIVKLLKPVGEA 122 Query: 118 NAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 AY+A + A + ++P +N++W+ +G L+P TP+ L + N N + F RTIS+D Sbjct: 123 QAYYALYGWAPGAGLTSSDVPGANSIWSAPAGATLSPETPVTLTWDNGNGLTFARTISVD 182 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVEQKY 234 E Y+F + +VTN + I +P G + RH P+ N F + EG + + D L E Y Sbjct: 183 EDYMFSVTQSVTNATDGTISLAPYGTLARHGEPEDLKNFFILHEGVVG-MADGELSELDY 241 Query: 235 SDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 SD+ I +N W+G +D YW S IP F S K + Y Sbjct: 242 SDVADFDIDPRDGSRSEVKQVTTNGWIGFTDHYWMSTLIPEPGQGFRSIAK-FDERRGIY 300 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 Q +++ G S T LFAGAKE+ +I YEK I F IDWGWF+F+ KP Sbjct: 301 QTDIVLPTVSLAAGNSTEVTTMLFAGAKEWASIRSYEKS-GIAGFLDSIDWGWFFFLTKP 359 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 MF ++ + L+GN G AI+ TV +K++ FPLA K Y S A MK +QP++++L+E+ Sbjct: 360 MFAVLHWLNLLIGNMGWAIIGLTVLIKIIVFPLAYKSYASMAKMKELQPEMEKLKER-TG 418 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q +QK M++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G +DL Sbjct: 419 DDRQKMQKEMMELYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQDL 478 Query: 466 AAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 +A DPT++ LFG+LPF P + +GI P+++ +SM++Q K++P P D Q MI Sbjct: 479 SAPDPTSLMNLFGLLPFSGPEAGSILALVFIGILPLLLGISMWLQQKLNPAPTDPTQQMI 538 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG + + ++S F K Sbjct: 539 FAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSGFKKKPK 598 Query: 580 SQ 581 S+ Sbjct: 599 SE 600 >gi|84685375|ref|ZP_01013273.1| putative inner membrane protein translocase component YidC [Maritimibacter alkaliphilus HTCC2654] gi|84666532|gb|EAQ13004.1| putative inner membrane protein translocase component YidC [Rhodobacterales bacterium HTCC2654] Length = 613 Score = 593 bits (1529), Expect = e-167, Method: Composition-based stats. Identities = 223/616 (36%), Positives = 341/616 (55%), Gaps = 40/616 (6%) Query: 1 ME-RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 ME +N N +A LS +++ AW + P E + + + P D + Sbjct: 1 MENQNRNLLIATVLSFVVITAWMLLF--PPAEPEAVQPEEVAETLAPGATDGAATPPNAA 58 Query: 60 DRA----------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 ++ Q L SPR+ ++ P L GSI+L G + DDL+L Y + + Sbjct: 59 EQTGTDAAPEATPDTTTTAQTLENSPRIPVETPKLSGSISLIGGRIDDLHLSDYRVSLDK 118 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFK 161 S VTLL PS + AY+ + N N ++P + T W L G LTP TPI L + Sbjct: 119 GSDTVTLLRPSGSDEAYYTLYGWAPGGNLGNADVPGAMTQWELEEGDTLTPETPITLAWT 178 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGF 220 N ++F RTIS+DE YLF + +V N S R +P G I RH P F + EG Sbjct: 179 NDAGMIFRRTISVDEDYLFTVRQSVENGSDIAQRLAPYGLIARHGEPSNLKGFFILHEGV 238 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSF 271 I D L E Y D + + N W+G +D YW ++ +P + Sbjct: 239 IR-QDDTELSEIDYKDARELDRDPREGAPAEATAITENGWVGFTDHYWETILVPESGQPY 297 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 + KY+ +G YQ + I + PG + + LFAGAKE+ TI Y+ D I RF Sbjct: 298 TAVVKYV-EGADIYQTEVRLPTIEVAPGATAEVSTRLFAGAKEWDTIRDYQNDEGIYRFL 356 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 IDWG F+F+ KP+F ++ + ++ +GN G +I+ T +K++ FPLA + YVS A MK Sbjct: 357 DSIDWGMFFFLTKPIFAVLHWLHSFIGNMGWSIIALTFVIKMVLFPLAYRSYVSMAKMKE 416 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++++LRE+ +Q+ M++LYK + +NP +GC PILLQIP++F++YKVI ++L Sbjct: 417 LQPEMEKLREQ-AGDDRMKMQQGMMELYKKNKVNPASGCLPILLQIPIWFSLYKVIFVTL 475 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQM 505 E+RH P++GWI+DL+A DP++I LFG+LP P F +G+ PI++ +SM++Q Sbjct: 476 ELRHEPWFGWIRDLSAPDPSSILNLFGLLPNAAPDPTSWFYFFSLGVLPILLGISMWLQQ 535 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 K++P PAD QA I+NWMP VF+F L F +GL+IYW +N ++ +QQ IM+ HGA+ Sbjct: 536 KLNPAPADATQATIMNWMPWVFMFMLGRFASGLVIYWIANNTLTFIQQYTIMRSHGAKPD 595 Query: 566 LIDRLRSTFSKNYNSQ 581 + ++S+F K ++ Sbjct: 596 IFGNIKSSFKKKPATE 611 >gi|312113264|ref|YP_004010860.1| membrane protein insertase, YidC/Oxa1 family [Rhodomicrobium vannielii ATCC 17100] gi|311218393|gb|ADP69761.1| membrane protein insertase, YidC/Oxa1 family [Rhodomicrobium vannielii ATCC 17100] Length = 711 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 242/599 (40%), Positives = 346/599 (57%), Gaps = 32/599 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ-VDNSYAAVLID 59 M+ N N+ +AIALS+ ++ WQ Y+ P ++ + Q Q D + I Sbjct: 1 MDNNRNFIIAIALSLSVLLGWQFLYMKPASDKARQQAIEAQQQTAGEQGTDPTVGGAAIP 60 Query: 60 DRA----------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 RA AL+ + R+ SL GSINLKG DD+ L+ Y V Sbjct: 61 PRASSVIPVPTTPKFASREAALAATQRIAFDTSSLTGSINLKGGSVDDVTLKEYRQTVDP 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 NSP VTLLSP+ + Y+A + S +I +P +TVW L P P+ L + N Sbjct: 121 NSPPVTLLSPAGSPEPYYAYTGWYSDQADISVPGPDTVWKQQGTGALAPGKPVTLTWDNG 180 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIA 222 ++F+R I+LDEHY+F I DTV N + + PR + R ++P + EG I Sbjct: 181 KGLVFKRAITLDEHYMFTITDTVENKTGKPVTLRPRAEVARLYEPTNLFGYSVLHEGLIG 240 Query: 223 VLGDKSLVEQKYSDIEKS-----------SISNFHESNSWLGISDKYWASVFIPSKETSF 271 + D L E YS K+ S + WLG +D+YWA+V +P + Sbjct: 241 LFKDAGLKELTYSSAIKNFDPAADNGKGVSKEIISDKGGWLGFTDQYWAAVLVPDQSKPL 300 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++ + +FS N +T+ G S T TN LFAGAK+ I Y D I RF+ Sbjct: 301 TARLFGTPQKD--FFVEFSENPVTVATGASETFTNKLFAGAKKVVLIEQYMADDKIDRFD 358 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 L+DWGWF F+ +P++ L+++ Y VGNFGIAI+LTTV VK+LFFPLA K Y + +K Sbjct: 359 KLVDWGWFPFLTQPLYFLLNWLYLHVGNFGIAILLTTVLVKVLFFPLANKSYSAMNKLKM 418 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ +++E+FK Q Q AM+ LYK +NP AGC PIL+QIPVFFA+YKV+ +S+ Sbjct: 419 LQPEMKKIQERFKDDK-QRQQHAMMTLYKKEKVNPAAGCLPILVQIPVFFALYKVLLVSI 477 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 EMRHAPF+GWI DL+A DPTNIFTLFG++P+ P FM +G P+IM SM++QM+++P P Sbjct: 478 EMRHAPFYGWIHDLSAPDPTNIFTLFGLIPWTPPHFMMLGALPLIMGCSMWLQMRLNPTP 537 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 D Q I WMPV+F F L+ F AGLI+YW+W+N+++ QQA+IMK + L++++ Sbjct: 538 PDPIQQKIFAWMPVLFTFMLAPFQAGLILYWTWNNILTFAQQALIMKRQDKNMNLLEQI 596 >gi|260432492|ref|ZP_05786463.1| inner membrane protein OxaA [Silicibacter lacuscaerulensis ITI-1157] gi|260416320|gb|EEX09579.1| inner membrane protein OxaA [Silicibacter lacuscaerulensis ITI-1157] Length = 609 Score = 590 bits (1522), Expect = e-166, Method: Composition-based stats. Identities = 220/609 (36%), Positives = 342/609 (56%), Gaps = 33/609 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 ++N N +A ALS +++ W + P + ++ T Q N+ ++ D Sbjct: 3 DQNKNLILATALSFLVILVWFVLFPPPEPTTLQDQTAISATEGDEIQTPNAAEPSVVGDA 62 Query: 62 A------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 A Q +S PRVE+ P L GS++L G + D+L L+ Y + + ++PIV LLSP Sbjct: 63 ATEATEAQPVSDVPRVEIDTPRLTGSLSLSGGRVDELYLKDYKVSLEDDAPIVELLSPVG 122 Query: 116 TKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + +AY+A + A ++P NT+WN+ SG+ L +P+ L + N N + F RTI+ Sbjct: 123 SDSAYYALYGWAPGAGLSGADVPGPNTLWNIESGETLGVDSPVTLKWDNGNGLTFRRTIA 182 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK------PQTATNTFGVQEGFIAVLGDK 227 +DE Y+F + +V N + +I +P G + RH N F + EG I + D Sbjct: 183 VDEDYMFTVTQSVENATQAEIGMAPYGILARHGMGEDGDLPGLKNFFILHEGVIG-MADG 241 Query: 228 SLVEQKYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 +L E KY D+ I + N W+G +D YW + IP + F + KY Sbjct: 242 TLTEVKYDDVRDFDIDPNERAQAEVYQVKENGWIGFTDHYWMTTLIPEPGSPFKAAAKYD 301 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 S YQ + +T+ PG++ LFAGAKE+ TI Y+ + +F IDWGW Sbjct: 302 SR-RKIYQTETVLPTLTVAPGETAQVKTRLFAGAKEWETIREYQAQ-GVQKFIDSIDWGW 359 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+F+ KP+F L+ L+GN G +I+ T+ +K + FPLA K YVS A MK +QP+++ Sbjct: 360 FFFLTKPIFWLLHNINALIGNMGWSIIGLTLIIKAILFPLAFKSYVSMAKMKELQPQMEA 419 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+E Q +Q+ M++LYK +NP AGC PILLQIP+FF++YKVI +++E+RHAP+ Sbjct: 420 LKEA-AGDDRQKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPW 478 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +G +DL+A DPT+I LFG+LP+ P + +GI P+++ +SM++Q K++P P Sbjct: 479 FGPFRDLSAPDPTSIMNLFGLLPWAGPEPGTLMATIFIGILPLLLGISMWLQQKLNPAPT 538 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QAMI WMP VF+F L SF +GL+IYW +N I+ QQ +IM+ G + + + S Sbjct: 539 DPTQAMIFAWMPWVFMFMLGSFASGLVIYWIANNTITFTQQYLIMRSQGYKPDVFGNIMS 598 Query: 573 TFSKNYNSQ 581 +F + + Sbjct: 599 SFKRTPKTD 607 >gi|85705859|ref|ZP_01036955.1| putative inner membrane protein translocase component YidC [Roseovarius sp. 217] gi|85669447|gb|EAQ24312.1| putative inner membrane protein translocase component YidC [Roseovarius sp. 217] Length = 611 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 215/600 (35%), Positives = 334/600 (55%), Gaps = 24/600 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM---NNERKNIQTVKQPNQVDNSYAAVLI 58 ++N N A ALS +++ W + P + Q+V P + A Sbjct: 3 DQNKNLIFATALSFLVILVWFVMFPPPESPAVDPNAPVPSATQSVPAPVADSTADATTTQ 62 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 +PR+ + PSL G+I+L+G + DDL L+ Y + S IV LL+P ++ Sbjct: 63 TAAPATEPDAPRLNIDTPSLQGTISLQGGRIDDLFLKNYRETIDPASDIVRLLAPVGSEA 122 Query: 119 AYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 Y+A + A ++P SNT+W + SG+ LTPT+PI L + N ++F R +S+DE Sbjct: 123 PYYALYGWAPGAGLTADQVPGSNTLWQIESGETLTPTSPITLSWDNGAGLIFRRELSVDE 182 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++F + +V N + +P G + RH +P F + EG I + D +L E KY Sbjct: 183 DFMFSVRQSVENTGASAVSLAPYGILARHGRPADLKKFFILHEGLIG-MADGTLSEIKYD 241 Query: 236 DIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 D+E+ + + N W+G +D YW + IP+ F S +Q Sbjct: 242 DVEEYPFNAREGAPAEVTQVTENGWIGFTDHYWMTTLIPASGNPFKS-VSKFDPQRGIFQ 300 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + T+ PG++ + LFAGAKE+ TI Y+ + + RF IDWGWF+F+ KP+ Sbjct: 301 TETVQPTQTVEPGQTASADTRLFAGAKEWATIRAYQNEQGVDRFLDSIDWGWFFFLTKPI 360 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F + + + ++GN G AI+ T+ +K L PLA K YVS A MK +QP++++++E Sbjct: 361 FAALHWLHAIIGNMGWAIIALTLLIKALVLPLAYKSYVSMAKMKELQPQMEKIKET-AGD 419 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q LQK M++LYK +NP AGC PILLQIP+FF++YKVI ++LE+RHAP+ WIKDL+ Sbjct: 420 DRQKLQKEMMELYKREKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHAPWVAWIKDLS 479 Query: 467 AADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 A D ++++ L+GILP+ P + +GI P+ + +SM++Q K++P P D Q MI Sbjct: 480 APDTSSLYNLWGILPWAAPEPGSVLALIFIGILPLCLGVSMWLQQKLNPSPTDPTQKMIF 539 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 WMP VF+F L SF +GL+IYW +NVI+ QQ VIM+ HG + + + S+F + + Sbjct: 540 AWMPWVFMFMLGSFASGLVIYWIANNVITFSQQYVIMRSHGHKPDVFGNILSSFKRKKPA 599 >gi|114765427|ref|ZP_01444542.1| putative inner membrane protein translocase component YidC [Pelagibaca bermudensis HTCC2601] gi|114542270|gb|EAU45300.1| putative inner membrane protein translocase component YidC [Roseovarius sp. HTCC2601] Length = 611 Score = 587 bits (1513), Expect = e-165, Method: Composition-based stats. Identities = 210/607 (34%), Positives = 332/607 (54%), Gaps = 31/607 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI------QTVKQPNQVDNSYAA 55 ++N N +A LS +++ W + P + + N T P+ ++ Sbjct: 3 DQNKNLLIATGLSFVVILVWFLLFPPPEEQLQDQAGPNAVETVEGDTATTPSAAPSATTG 62 Query: 56 VLIDDRAQALSM---SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A A + +PRV + L GSI+L G + D+L L+ Y + + +SP V +L Sbjct: 63 GGDTAAAPAQAETVDAPRVAIDTDRLGGSISLTGGRIDELILKDYTVTLDEDSPNVQILE 122 Query: 113 PSNTKNAYFAELDYVSTANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 P N Y+A + + ++P +NT W L SG L+ +P+ L + + ++F R Sbjct: 123 PVGGGNPYYALYGWAPGSGLGLDDVPGANTAWELESGDSLSVDSPVTLRWDSPAGLVFRR 182 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSL 229 TIS+DE ++F + +V N + +P G I RH P N F + EG +A + D L Sbjct: 183 TISIDEDFMFSVTQSVENAGEGTVSAAPYGIIARHGEPADLKNFFVLHEGVVA-IADGKL 241 Query: 230 VEQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 E YSD+ ++ + N W+G +D YW + IP + F KY + Sbjct: 242 SEIGYSDMPDMDVNQSEGARAEVTQVTENGWIGFTDHYWMTTLIPQQGAPFKQAAKY-DE 300 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 YQ + +T+ PG++ T LFAGAKE+ TI Y +D + RF IDWGWF+ Sbjct: 301 RRDIYQTEAVLPTMTLAPGETQEVTTQLFAGAKEYETIRDY-EDAGVVRFIDSIDWGWFF 359 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ KP+F ++ + L+GN G +I+ T+ +K + FPLA K YVS A MK +QP++++L+ Sbjct: 360 FLTKPIFWMLHQIHLLIGNMGWSIIGLTLIIKAILFPLAYKSYVSMAKMKELQPEMEKLK 419 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK Q LQ+ M+ LYK +NP +GC PILLQIP+FF++YKVI ++ E+RHAP++G Sbjct: 420 EK-AGDDRQKLQQEMMALYKKEKVNPASGCLPILLQIPIFFSLYKVIFVAFELRHAPWFG 478 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADK 514 +DL+ DPT++F LFG+LP+ P + +GI P+++ +SM++Q K++P PAD Sbjct: 479 PFQDLSTPDPTSLFNLFGLLPWAAPAPGTTLALVFIGILPLLLGISMWLQQKLNPAPADP 538 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 Q MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + + + S F Sbjct: 539 TQKMIFAWMPWVFMFMLGGFASGLVVYWITNNTITFTQQYLIMRSQGYKPDVFGNIVSGF 598 Query: 575 SKNYNSQ 581 + + Sbjct: 599 KRKPKAD 605 >gi|126734531|ref|ZP_01750277.1| inner membrane protein oxaA, putative [Roseobacter sp. CCS2] gi|126715086|gb|EBA11951.1| inner membrane protein oxaA, putative [Roseobacter sp. CCS2] Length = 607 Score = 586 bits (1512), Expect = e-165, Method: Composition-based stats. Identities = 213/596 (35%), Positives = 333/596 (55%), Gaps = 25/596 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY---AAVLI 58 ++N N +A LS ++ AW + P ++ + QT+ P AA Sbjct: 3 DQNKNLILATVLSFAVIVAWTTLF-PPEDLPVDPATETAQTLDDPTLPAADPVNPAATTP 61 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + +PRV ++ GSI+L+G + DDL L Y + ++ +V LL P Sbjct: 62 TEAPEPAADAPRVAIETGEFSGSISLQGGRIDDLALTNYRETIDEDAEVVRLLKPVGEPG 121 Query: 119 AYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 AYFA + +T +P +T+W L SG LTP +P+ L + N +F I++D+ Sbjct: 122 AYFASFGWTATDGIDASAVPGPDTIWALESGDTLTPNSPVTLSWDNGAGQIFRTEIAVDD 181 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++F +V N + I P G + RH P N F + EG + + D L E Y Sbjct: 182 AFMFTFAQSVENATSTAISARPYGLLRRHGEPDDLKNFFILHEGMVR-MTDGELEETGYD 240 Query: 236 DIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 DI + ++ + + W+G +D YW + IP + F S KY D YQ Sbjct: 241 DITEYAVDPRERTQAERLDVSESGWIGYTDHYWMTTLIPEQGVPFRSTSKYF-DVRDLYQ 299 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 A+ T+ G++ T T LFAGAKE+ I +YE + + F IDWGWF+F+ KP+ Sbjct: 300 AEAVMPIETVAAGETATVTTRLFAGAKEWEAIRNYENEGGVGGFLDSIDWGWFFFLTKPI 359 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ Y +GN G +I+ TV +K++ PLA K YVS A MK +QP++++L+E+ Sbjct: 360 FALLHYLNIFIGNMGWSILALTVILKIIVLPLAYKSYVSMAKMKELQPEMEKLKERTGDD 419 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q +Q+ M++LYK + +NP AGC PILLQIP+FF++YKVI +++E+RHAP+ GWI+DL+ Sbjct: 420 K-QAMQQGMMKLYKDNKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPWIGWIRDLS 478 Query: 467 AADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 A DP++ LFG+LP+ P + +GI PI++ +SM++Q K++P P D Q MI Sbjct: 479 APDPSSFINLFGLLPYAAPEPGSILALIFIGILPILLGVSMWLQQKLNPAPTDPTQQMIF 538 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 WMP VF+F L SF +GL++YW +NVI+ +QQ IM+ HGA+ + ++++ K Sbjct: 539 AWMPWVFMFMLGSFASGLVLYWIANNVITFIQQYAIMRSHGAKPDVFGNIKASLKK 594 >gi|259415716|ref|ZP_05739636.1| inner membrane protein OxaA [Silicibacter sp. TrichCH4B] gi|259347155|gb|EEW58932.1| inner membrane protein OxaA [Silicibacter sp. TrichCH4B] Length = 611 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 221/608 (36%), Positives = 337/608 (55%), Gaps = 32/608 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 ++N N +A ALS +++ W F+ P + T + + A + Sbjct: 3 DQNKNLLLATALSFLVILGWYFFFPPPEEAPQPAAQVTETTATPGDTSGPAAAPSAGEAT 62 Query: 62 AQALSM----------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A+A + +PR+ + P + GSI+LKG + DDL L+ Y + +SPIVTLL Sbjct: 63 AEADAAATAEVDAAEDAPRLAINTPRVEGSISLKGGRIDDLRLKDYRETLDDDSPIVTLL 122 Query: 112 SPSNTKNAYFAELDYVSTANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 SP+ NAY+A + ++P +NT W G LTP T + L + N + F Sbjct: 123 SPAGQANAYYALYGWAPGTGLGIEDVPTANTRWQAADGATLTPETSVTLTWDNGKGLTFS 182 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKS 228 R I++DE Y+F I +VTN S + + +P G + RH P N F + EG + + D Sbjct: 183 REIAIDEDYMFSITQSVTNTSGESVALAPYGTLARHGLPANLENFFVLHEGVVG-MADGE 241 Query: 229 LVEQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 L E Y D+ S N W+G + YW S IP+ +F S KY Sbjct: 242 LAEIDYDDMTDFDPDPRDGSRSQITSVTENGWIGFTGHYWMSTLIPAPGDAFRSIVKY-D 300 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 + YQ +T+ G+S + + LFAGAKE+ TI YE+ I F IDWGWF Sbjct: 301 ERRDIYQTDVVLPTVTLAAGESTSASTQLFAGAKEWATIREYERG-GIAGFLDSIDWGWF 359 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +F KP+F ++ + +GN G+AI+ T +K+L FPLA K Y S A MK +QP++++L Sbjct: 360 FFFTKPIFAVLHWLNAAIGNMGVAIIALTFLLKILVFPLAYKSYASMARMKELQPEMEKL 419 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+ Q +QK M++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RH+ F+ Sbjct: 420 RER-AGDDRQKMQKEMMELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHSAFF 478 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPAD 513 G +DL+A DPT+++ LFG+LP+ P + +GI PI++ +SM++Q K++P PAD Sbjct: 479 GPFQDLSAPDPTSLYNLFGLLPWGAPAPDSLLALVFIGILPILLGISMWLQQKLNPAPAD 538 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + Q MI WMP VF+F L F +GL++YW +NVI+ QQ +IM+ HG + ++S+ Sbjct: 539 ETQKMIFAWMPWVFMFMLGGFASGLVVYWITNNVITFTQQYLIMRSHGYTPDVFGNIKSS 598 Query: 574 FSKNYNSQ 581 F + ++ Sbjct: 599 FKRGEKAE 606 >gi|254464722|ref|ZP_05078133.1| 60 kDa inner membrane insertion protein [Rhodobacterales bacterium Y4I] gi|206685630|gb|EDZ46112.1| 60 kDa inner membrane insertion protein [Rhodobacterales bacterium Y4I] Length = 600 Score = 584 bits (1506), Expect = e-164, Method: Composition-based stats. Identities = 227/601 (37%), Positives = 338/601 (56%), Gaps = 25/601 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 ++N N +A LS +++ W + P E+ + + S AA +D Sbjct: 3 DQNKNLILATVLSFLVILGWYTLFPPPEPEQAPETAVSETAPAGNTALAPSAAAEAVDSS 62 Query: 62 AQALSMSP---RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A A + +P R+ + P + GSI+L+G + DDL+L+ Y + +NSPIV LL P Sbjct: 63 APAQAEAPQAARLAIDTPRVTGSISLQGGRIDDLSLKDYRETLDANSPIVKLLKPVGEAQ 122 Query: 119 AYFAELDYVSTANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 AY+A + A ++P +NTVW+ + LTP +P+ L + N + F RTIS+DE Sbjct: 123 AYYALYGWAPGAGLSLDDVPGANTVWSAGADATLTPDSPVTLTWDNGKGLTFSRTISVDE 182 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y+F I +V N S + +P G + RH +P N F + EG + + D L E Y Sbjct: 183 DYMFSITQSVANASGGTVSLAPYGTLARHSQPADLKNFFILHEGLVG-MSDGELAEIDYD 241 Query: 236 DIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 D+ S N W+G +D YW S +P+ +F S K + YQ Sbjct: 242 DMADFEADARDGSKAEVRQVAENGWIGFTDHYWMSTLVPAPGQAFRSIAK-FDERRDIYQ 300 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 +T+ G+S T LFAGAKE+ TI Y+K I F +IDWGWF+F+ KPM Sbjct: 301 TDIVLPTVTVADGQSSEVTTQLFAGAKEWETIRGYQKA-GIQGFLDVIDWGWFFFLTKPM 359 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ L+GN G AI+ TV +K+L FPLA K Y S A MK +QP++++L+E+ Sbjct: 360 FWLLHNLNVLIGNMGWAIIGLTVVIKILVFPLAYKSYASMAKMKELQPEMEKLKER-AGD 418 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q +QK M++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G +DL+ Sbjct: 419 DRQKMQKEMMELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQDLS 478 Query: 467 AADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 A DPT+IF LFG+LP+ P + +GI PI++ +SM++Q K++P P D Q MI Sbjct: 479 APDPTSIFNLFGLLPWAAPAPESILALVFIGILPILLGVSMWLQQKLNPAPTDPTQQMIF 538 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG + ++S+F K + Sbjct: 539 AWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYSPDVFGNIKSSFKKKPKA 598 Query: 581 Q 581 + Sbjct: 599 E 599 >gi|110678771|ref|YP_681778.1| putative inner membrane protein translocase component YidC [Roseobacter denitrificans OCh 114] gi|123172722|sp|Q16AA1|OXAA_ROSDO RecName: Full=Inner membrane protein oxaA gi|109454887|gb|ABG31092.1| inner membrane protein oxaA, putative [Roseobacter denitrificans OCh 114] Length = 606 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 221/604 (36%), Positives = 339/604 (56%), Gaps = 30/604 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIE------EMNNERKNIQTVKQPNQVDNSYAA 55 ++N N +A ALS I++ W + P E + T P+ ++ + Sbjct: 3 DQNKNLILATALSFIVILVWFVLFPPPEPEMPLTGETSTELTPDAATGSLPSVTSDTAPS 62 Query: 56 VLID--DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 V+I+ R+ AL +PRVE+ + GSI+L G + DDL+L+ Y ++ IVT+LSP Sbjct: 63 VVIEGETRSAALEQAPRVEIATDRVKGSISLLGGRIDDLSLKDYRETQEEDADIVTMLSP 122 Query: 114 SNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + AY+A + + A ++P +T W +I G IL+ P+ L + N + F R Sbjct: 123 VGSPGAYYALYGWAAGAGVDPSQVPGPDTEWQVIDGDILSVDAPVTLQWDNGAGLSFTRI 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLV 230 I +D++Y+F+I +V N S + +P G + RH P N F + EG +A + D L Sbjct: 183 IEIDDNYMFQITQSVANTSDAPVTVAPYGILARHGEPDDLKNFFILHEGVVA-MADGELT 241 Query: 231 EQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 E + DI + + N W+G +D +W SV IP S KY Sbjct: 242 ETNWDDIPEFPVDQREGVPAERIENVLNGWIGFTDHFWMSVLIPDPSASARLTTKYRPRA 301 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 YQA+ T+ PG S++ T LFAGAKE+ TI +Y+ D + RF IDWGWF+F Sbjct: 302 -DIYQAETVLPAQTVAPGTSVSATTQLFAGAKEWETIRNYQTD-GVDRFIDSIDWGWFFF 359 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP+F L+ Y +GN G AI+ T+ +K + PLA K YVS A MK +QP++++L+E Sbjct: 360 LTKPIFFLLHYLNAFIGNMGWAIIGLTLIIKAILLPLAYKSYVSMAKMKELQPQMEKLKE 419 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + Q +Q+ M++LYK +NP AGC PILLQIP+FF++YKVI +++E+RHAPF+G Sbjct: 420 E-AGDDRQKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPFFGP 478 Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 +DL+A DPT+I L+G+LPF P + +GI P+++ +SM++Q K++P P D Sbjct: 479 FQDLSAPDPTSIMNLYGLLPFDGPEPGSIMALIFIGILPLLLGISMWLQQKLNPAPTDPT 538 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 Q MI WMP VF+F L F +GL++YW +N I+ VQQ +IM+ G + + ++ F Sbjct: 539 QQMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFVQQYMIMRSQGYKPDVFGNIKGGFQ 598 Query: 576 KNYN 579 K Sbjct: 599 KKTK 602 >gi|209965568|ref|YP_002298483.1| hypothetical protein RC1_2283 [Rhodospirillum centenum SW] gi|209959034|gb|ACI99670.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 602 Score = 581 bits (1497), Expect = e-163, Method: Composition-based stats. Identities = 232/594 (39%), Positives = 331/594 (55%), Gaps = 35/594 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRI---EEMNNERKNIQTVKQPNQVDNSYAA-- 55 M N +AI +SV I++ + FY PR EE ++ +Q P V A Sbjct: 1 MTDQKNLILAIVISVAILFGFNYFYERPRQQALEEYRQQQAALQAETAPAAVPGVTAPGS 60 Query: 56 ------------------------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDD 91 DR L S RV++ P L GS+NL+G + DD Sbjct: 61 TVPGPAGDIPVPAPGAPAPTDAVPAAPRDRGAVLGDSQRVQVDTPRLHGSVNLRGGRIDD 120 Query: 92 LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI--ELPNSNTVWNLISGKI 149 L L YH+ +SP V LLSP T YFAE +V TA+ LP T W +S Sbjct: 121 LTLANYHVTPDKSSPEVVLLSPVGTSQPYFAEFGWVPTADTAGQPLPGPTTDWQPVSQGP 180 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209 LTP +P+ L + N ++FER I++D Y+F + VTN S + P G + R T Sbjct: 181 LTPDSPVVLRWDNGQGLVFEREIAIDRDYMFTVTQRVTNQSGQPVTLHPYGFVQRRGTPT 240 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEK-SSISNFHESNSWLGISDKYWASVFIPSKE 268 + F + EG + V D +L E YSD++ + + + W G +DKYW +P + Sbjct: 241 TSGFFILHEGALGVF-DGTLREFDYSDLKDSTQPATQTTTGGWFGFTDKYWLVTLVPDQA 299 Query: 269 TSFHSQFKYLSDG-HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + + + G YQ F +T+ PG + +T+ LFAGAK T+ YE +L I Sbjct: 300 SPVDVRVLHQDQGGQPLYQVDFRGQGLTVAPGATAESTHRLFAGAKIVRTLDAYESELGI 359 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 RF +DWGWFYF+ KP F + +GNFGIAI++ TV ++L FFPLA KQY + A Sbjct: 360 ARFSYAVDWGWFYFLTKPFFYGLDLLGQALGNFGIAILVFTVLLRLAFFPLANKQYKAFA 419 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 MK +QPK++ELR++ Q L A ++LYK +NPL+GC PILLQIPVFFA+YKV+ Sbjct: 420 KMKLLQPKMEELRKRHGDD-RQKLSMATMELYKQEKVNPLSGCLPILLQIPVFFALYKVL 478 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 +++EMRHAPF+GWI DL+A DPT +F LFG++P+ PGF+ VG P++M +M++Q K+ Sbjct: 479 FVTIEMRHAPFYGWITDLSAPDPTTVFNLFGLIPWSPPGFLMVGALPLMMGFTMWLQQKI 538 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 SP D Q I +P +F + +++FPAGL+IYW+WSN+++I QQ IM+ G Sbjct: 539 SPANPDPIQQRIFMVLPFLFTYMMAAFPAGLVIYWTWSNLLAIAQQWYIMRRMG 592 >gi|83594668|ref|YP_428420.1| putative inner membrane protein translocase component YidC [Rhodospirillum rubrum ATCC 11170] gi|83577582|gb|ABC24133.1| protein translocase subunit yidC [Rhodospirillum rubrum ATCC 11170] Length = 595 Score = 580 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 218/597 (36%), Positives = 338/597 (56%), Gaps = 37/597 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ-------------TVKQPN 47 M + N +AI LS+ +++ ++ F+ + ++ + Q +V+ P Sbjct: 1 MLQQRNLILAIVLSMAVLFGFEYFFGAKQPPMTAQQQDSAQMAAPSNGQMAAPSSVQAPG 60 Query: 48 QVDNSYAAVLIDDRAQ--------------------ALSMSPRVELKNPSLIGSINLKGA 87 Q + V A A +SPR+ + L GSI L+GA Sbjct: 61 QSPVAAPQVPAQPGAAVPTPGGMTPGAASLSREEALAADISPRIGIDTARLHGSIRLRGA 120 Query: 88 QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147 + DDL+L Y V SP ++LLSP Y+AE +V+ +++P+++T+W G Sbjct: 121 RIDDLSLVDYRETVDPQSPEISLLSPPGAPLPYYAEFGWVAGTPGVKVPDADTLWQADRG 180 Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 L P+ L + N + F R I++D ++F I V N + P G + R Sbjct: 181 A-LGVDAPVTLTWDNGEGLRFIRKIAIDHDFMFSITQAVENTGAGAVTLFPYGLVSRINT 239 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 N + + EG + V D +L E KYS ++ + W+GI+DKYW + + + Sbjct: 240 PALLNYYILHEGPLGVF-DGTLKEVKYSALKDDGEVKHTSTGGWMGITDKYWLTALVTDQ 298 Query: 268 ETSFHSQFKYL-SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 +F Y DG YQA F T+ PG I T+N LF+GAKE + Y +L Sbjct: 299 SMPVTGRFLYQPRDGRDGYQADFLGAAFTVEPGGRIETSNHLFSGAKEVKLLDRYTDELG 358 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 I F++ ID+GWFYF+ KP F+ + + + ++GN G+AI+ TV +KL+FFPLA K Y S Sbjct: 359 IKNFDLAIDFGWFYFMTKPFFLSIQFLHGILGNMGLAILAFTVVLKLVFFPLANKSYRSM 418 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 + MK +QP++ +L+E+FK + L + M+ LYK +NPL+GC PI++QIPVFFA+YKV Sbjct: 419 SKMKLLQPELKKLQERFKDDRAR-LNQEMMSLYKKEQVNPLSGCLPIVIQIPVFFALYKV 477 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + +S+EMRH PF+GWI+DLAA DPT +F LFG++P+ P + +G WP+IM ++M++Q K Sbjct: 478 LFVSIEMRHEPFYGWIRDLAAPDPTTVFNLFGLIPWDPPNMLMLGAWPLIMGVTMWMQQK 537 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P PAD QA I+ ++P++F F L+ F AGL+IYW+W+N++SI QQ VIMK GA+ Sbjct: 538 LNPTPADPTQAKIMMFLPIMFTFMLAHFAAGLVIYWTWNNLLSITQQWVIMKRMGAK 594 >gi|163868925|ref|YP_001610152.1| putative inner membrane protein translocase component YidC [Bartonella tribocorum CIP 105476] gi|161018599|emb|CAK02157.1| translocase precursor subunit [Bartonella tribocorum CIP 105476] Length = 620 Score = 580 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 262/613 (42%), Positives = 382/613 (62%), Gaps = 34/613 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK--------------NIQTVKQP 46 ME N N+F+AI LS +++ AWQ +V P+ ++ N++ + TV Sbjct: 1 MEYNRNFFIAIGLSFLVLIAWQFLHVAPKQAKLQNQQAITQQQQLSKQQSPLSSATVNFS 60 Query: 47 NQVDNSYAAVLIDD------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 + + +I+ R L+ + R+ +K L GSINL GAQFDDL+L+ Y + Sbjct: 61 DDTSTHPSTSIIEQPMTPEVRKAVLAKTERIAIKTNELEGSINLVGAQFDDLHLKKYRVT 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKI-LTPTTPIKL 158 V SP + LL+P K Y AE + S + + LP +T W + LTP+TPI L Sbjct: 121 VDKKSPEIDLLNPKGFKTTYLAEFGFASASLPAKALPQPDTQWQIEGNNTTLTPSTPITL 180 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQ 217 ++ N +F RT+ +D++Y+F I D+++N S I S R+ R P TN T+ + Sbjct: 181 IYNNGQGQIFRRTLFVDDYYMFTIEDSISNESDQPIYLSSYARVARAAPPEHTNATYLLH 240 Query: 218 EGFIAVLGDKSLVEQKYSDIEK---------SSISNFHESNSWLGISDKYWASVFIPSKE 268 EG I + GD SL +KY + + S++ + W+GI+DKYWA IP ++ Sbjct: 241 EGMIGIAGD-SLKTEKYKTLAELDPNPDNGQKSMTFSKVTGGWIGITDKYWAVAVIPQQD 299 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + S+F Y YQ+ + +TI P ++ T TN LFAGAK+ I+HY+ +L I Sbjct: 300 KEYTSRFIYFDRLQTHYQSDLLGSLLTIAPNETKTVTNHLFAGAKQVEIINHYQNNLKIN 359 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 +F +LIDWGWF FI KPMF L+ Y GNFGIAI+L TV +K+L FPLA K Y S A Sbjct: 360 KFALLIDWGWFDFITKPMFALIDILYKQTGNFGIAILLVTVLLKILLFPLANKSYQSMAR 419 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 MK +QP++ E++EK+ + Q+A+I+LYKT INPLAGCWP+L+Q P+FFA+YKV+ Sbjct: 420 MKLLQPRLLEIKEKYPDDKNK-QQQAIIELYKTEKINPLAGCWPMLVQFPIFFALYKVLY 478 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 I++EMRHAPF+GWI+DLAA DPT++F LFG+LP+ P F+ +G WP+IM ++MF+QM+M+ Sbjct: 479 ITIEMRHAPFFGWIQDLAAPDPTSLFNLFGLLPYTTPAFLMIGAWPLIMGITMFLQMRMN 538 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P P D+ QAMI WMPVVF F L+SFP GL+IYW+W+N++SI+QQ ++MK GA+I L D Sbjct: 539 PAPQDQTQAMIFTWMPVVFTFMLASFPVGLVIYWAWNNILSIIQQGIMMKRQGAKIELFD 598 Query: 569 RLRSTFSKNYNSQ 581 L++ + K+ + Sbjct: 599 NLKTMWKKSPKKE 611 >gi|163733766|ref|ZP_02141208.1| putative inner membrane protein translocase component YidC [Roseobacter litoralis Och 149] gi|161392877|gb|EDQ17204.1| putative inner membrane protein translocase component YidC [Roseobacter litoralis Och 149] Length = 606 Score = 579 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 220/604 (36%), Positives = 337/604 (55%), Gaps = 30/604 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIE------EMNNERKNIQTVKQPNQVDNSYAA 55 ++N N +A ALS +++ W + P E + T P+ ++ + Sbjct: 3 DQNKNLILATALSFVVILVWFVLFPPPEPEIPLTSETSTELTPDAATGSLPSVTSDTAPS 62 Query: 56 VLID--DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 V+I+ R+ AL +PRVE+ L GSI+L G + DDL+L+ Y ++ IVT+LSP Sbjct: 63 VVIEGETRSAALEEAPRVEIATDRLKGSISLLGGRIDDLSLKDYRETQEDDADIVTMLSP 122 Query: 114 SNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + AY+A + + A ++P +T W +I G IL+ PI L + N + F R Sbjct: 123 VGSPGAYYALYGWAAGAGVDPSQVPGPDTEWQVIDGDILSVDAPITLQWNNGAGLSFTRI 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLV 230 I +D++Y+F+I +V N S + +P G + RH P N F + EG +A + D L Sbjct: 183 IEIDDNYMFEITQSVANTSDAPVTVAPYGILARHGEPADLKNFFILHEGVVA-MADGELT 241 Query: 231 EQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 E + DI + + N W+G +D +W SV IP S KY Sbjct: 242 ETNWDDIPEFPVDQREGVPAERIENVLNGWIGFTDHFWMSVLIPDPSASARLTTKYRPRA 301 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 YQA+ T+ PG S++ T LFAGAKE+ TI +Y+ D + RF IDWGWF+F Sbjct: 302 -DIYQAETVLPAQTVAPGTSVSATTQLFAGAKEWETIRNYQTD-GVDRFIDSIDWGWFFF 359 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP+F L+ Y +GN G AI+ T+ +K + PLA K YVS A MK +QP++++L+E Sbjct: 360 LTKPIFFLLHYLNAFIGNMGWAIIGLTLIIKAILLPLAYKSYVSMAKMKELQPQMEKLKE 419 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + Q +Q+ M++LYK +NP AGC PILLQIP+FF++YKVI +++E+RHAPF+G Sbjct: 420 E-AGDDRQKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPFFGP 478 Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 +DL+A DPT+I +G+LPF P + +GI P+++ +SM++Q K++P P D Sbjct: 479 FQDLSAPDPTSIMNFYGLLPFDGPEPGSIMALIFIGILPLLLGISMWMQQKLNPAPTDPT 538 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 Q MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + + ++ F Sbjct: 539 QQMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFAQQYMIMRSQGYKPDVFGNIKGGFQ 598 Query: 576 KNYN 579 K Sbjct: 599 KKTK 602 >gi|86135820|ref|ZP_01054399.1| putative inner membrane protein translocase component YidC [Roseobacter sp. MED193] gi|85826694|gb|EAQ46890.1| putative inner membrane protein translocase component YidC [Roseobacter sp. MED193] Length = 602 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 213/603 (35%), Positives = 333/603 (55%), Gaps = 28/603 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPR----IEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ++N N +AIALS +++ W F+ P E + E + A Sbjct: 3 DQNKNLILAIALSSLVLLGWMYFFPPPEVTPAPEAVATETAPADGTASSPSAAVAADAAT 62 Query: 58 IDDRAQALSM-SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 +A + +PR+ +++ + GSI+L+G + DDL L+ Y + + IV LSP Sbjct: 63 SQPSEEASASDAPRISIESDRITGSISLQGGRIDDLALKDYRITNDAPE-IVQFLSPVGQ 121 Query: 117 KNAYFAELDYVSTANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 ++AY+A + + ++P +NT+W + LTP + + L + N + F RTI++ Sbjct: 122 QDAYYALYGWAPGSGLGAEDVPGANTLWTAPADAELTPDSSVTLTWDNGKGLTFNRTIAV 181 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVEQK 233 DE Y+F I +VTN S + +P G + RH P N F + EG + + D L E Sbjct: 182 DEDYMFAITQSVTNASGGAVSLAPYGTLARHGEPADMKNFFILHEGVVG-MADGELAELD 240 Query: 234 YSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 YSD+ + S + W+G +D YW S IP+ +F S KY + Sbjct: 241 YSDVADFDVDPRDGSRSEVKQVASDGWIGFTDHYWMSTLIPAPGQAFRSSVKY-DERRDI 299 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQ +T+ G++ T LF+GAKE+ TI YEK I F IDWGWF+F+ K Sbjct: 300 YQTDVVLPTMTLADGETSEVTTQLFSGAKEWATIRAYEKG-GIAGFLDSIDWGWFFFLTK 358 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F ++ + L+GN G AI+ TV +K++ FPLA K Y S A MK +QP++++L+E+ Sbjct: 359 PIFAVLHWLNALIGNMGWAIIALTVLIKIIVFPLAYKSYASMAKMKELQPEMEKLKER-A 417 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q QK +++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G +D Sbjct: 418 GDDRQKQQKEIMELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQD 477 Query: 465 LAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 L+A DPT+I LFG+LPF P + +GI P+++ +SM++Q K++P P D Q M Sbjct: 478 LSAPDPTSIMNLFGLLPFAGPTPDSIMALVFIGILPLLLGISMWLQQKLNPAPTDPTQQM 537 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG + ++++ + Sbjct: 538 IFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYTPDVFGNIKASVKRKP 597 Query: 579 NSQ 581 + Sbjct: 598 KTD 600 >gi|319408960|emb|CBI82617.1| translocase precursor subunit [Bartonella schoenbuchensis R1] Length = 611 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 268/610 (43%), Positives = 384/610 (62%), Gaps = 31/610 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 ME N N+F+AI LS+II AW FYV P+ ++ + Q KQ +++ + Sbjct: 1 MEYNRNFFIAIGLSLIIFVAWHFFYVAPQQAKLQEMQMAQQLSKQSSEIPSTDMHFSDSA 60 Query: 52 --------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 S + ++R+ L+ + R+ +K L GSINL GAQFDDL L+ Y L V Sbjct: 61 QISGSGSISDRPMTPENRSAELAKTNRIAIKTDELEGSINLVGAQFDDLFLKKYRLTVDK 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNI-ELPNSNTVWNLISGKI-LTPTTPIKLVFK 161 SP + LL+P+ Y AE + S++ LP S+T W + LTP+TP+ L++ Sbjct: 121 GSPEIALLNPNGFNTTYLAEFGFTSSSLPATALPQSHTQWQIEGKNTTLTPSTPVTLIYN 180 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGF 220 N +F RT+S+D HY+F I D++ N S + I SP R+ R P TN T+ + EG Sbjct: 181 NGQGQIFRRTLSIDNHYMFTIEDSIKNESDNPIYLSPYARVARAAPPEYTNATYLLHEGM 240 Query: 221 IAVLGDKSLVEQKYSDIEK---------SSISNFHESNSWLGISDKYWASVFIPSKETSF 271 I + GD SL + Y ++E+ S+ + W+GI+DKYWA V IP ++ + Sbjct: 241 IGIAGD-SLKTETYKNLEELNPNPENGQKSMIFSKVTGGWIGITDKYWAVVVIPPQDQEY 299 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 S+F Y + + YQ+ ++ +T+ P ++ T TN LFAGAK+ I+ Y+ L I +F Sbjct: 300 TSRFIYFNQLNTHYQSDLQSSLLTVAPNETKTITNHLFAGAKQVEIINRYQNQLKIRKFG 359 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +LIDWGWF FI KPMF L+ FY GNFGIAI+L TV +K+L FPLA K Y S A MK Sbjct: 360 LLIDWGWFDFITKPMFALIDIFYKQTGNFGIAILLVTVLLKVLLFPLANKSYKSMARMKL 419 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP + E++EK+ + Q+A+I LYKT INPLAGCWP+L+Q P+FFA+YKV+ I++ Sbjct: 420 VQPMMQEIKEKYADDRVK-QQQAVIALYKTQKINPLAGCWPMLVQFPIFFALYKVLYITI 478 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P P Sbjct: 479 EMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYEVPTFLILGAWPLIMGITMFLQMQMNPTP 538 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D QAMI WMPV+F F L+SFPAGL+IYW+W+N +SI+QQ ++MK G +I L + L+ Sbjct: 539 PDPTQAMIFTWMPVIFTFMLASFPAGLVIYWAWNNTLSIIQQGIMMKRQGVKIELFNNLK 598 Query: 572 STFSKNYNSQ 581 + F K + Sbjct: 599 AMFHKKSKKE 608 >gi|83313455|ref|YP_423719.1| putative inner membrane protein translocase component YidC [Magnetospirillum magneticum AMB-1] gi|82948296|dbj|BAE53160.1| Preprotein translocase subunit YidC [Magnetospirillum magneticum AMB-1] Length = 579 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 222/581 (38%), Positives = 333/581 (57%), Gaps = 20/581 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------------EMNNERKNIQTV 43 M N FVAIA+SV I+ WQ F+ + + Sbjct: 1 MNDQRNLFVAIAISVAILIGWQYFFPTAKPPVEQAAQQQSAEQKASAPATAPTPATASSP 60 Query: 44 KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 Q + AA RA AL S R+ ++ PS+ GSI L GA+ DD+ L Y ++ Sbjct: 61 AQVPGSPAAAAAQPAATRADALGKSRRIAIQTPSMHGSIALTGARIDDITLVKYRETPAA 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +S + L+SP+ + Y+AE +V+T N+++P ++VW LTP +P+ L + N Sbjct: 121 DSREIDLMSPAESPEPYWAEFGWVATEANVKVPGPDSVWQAQGSGPLTPASPLVLTWDNG 180 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + F RT ++DE+Y+F + V N P + R + + EG + V Sbjct: 181 EGLRFVRTYTVDENYMFGVAQRVENYGTKPASLHPYALLARTGTPHVAGMYILHEGPLGV 240 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH- 282 D +L E KY D++K S + W GI+DKYW + +P +T +F + G+ Sbjct: 241 F-DGTLKEMKYDDLKKEGSSRHKTTGGWAGITDKYWLTALVPPAKTEITGRFVHQRLGNA 299 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 RYQ + A I PGKS LF GAK+ + Y + I RF++ ID+GWFYF+ Sbjct: 300 DRYQVDYLAPARMIEPGKSEEAGFHLFTGAKQVSLLDGYAEKFGIDRFDLAIDFGWFYFL 359 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP F L+ ++ +GN G+AI+ TV +KL FPLA K YV+ MK +QPK+ EL+ + Sbjct: 360 TKPFFYLLQMLHSALGNMGLAILALTVILKLAMFPLANKSYVAMGKMKKLQPKVQELQAR 419 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + LQ+ M+ LYKT +NP++GC PI++QIPVFFA+YKV+ +++EMRHAPF+GWI Sbjct: 420 YADDK-MRLQQEMMALYKTEKVNPVSGCLPIMVQIPVFFALYKVLFVTIEMRHAPFYGWI 478 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+A DPTNIFTLFG++P+ P H+G+WP+IM ++MF+Q K++P P D QA ++ + Sbjct: 479 SDLSAQDPTNIFTLFGMIPWTPPSMFHLGVWPLIMGVTMFLQQKLNPQPTDPVQAKMMQF 538 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P++F F L++F +GL+IYW+WSN +SI+QQ VIMK + Sbjct: 539 LPIIFTFLLANFASGLVIYWAWSNTLSILQQWVIMKRAEEK 579 >gi|323137577|ref|ZP_08072654.1| membrane protein insertase, YidC/Oxa1 family [Methylocystis sp. ATCC 49242] gi|322397203|gb|EFX99727.1| membrane protein insertase, YidC/Oxa1 family [Methylocystis sp. ATCC 49242] Length = 591 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 244/593 (41%), Positives = 354/593 (59%), Gaps = 20/593 (3%) Query: 1 MERN-WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV--- 56 M N N +A ALS+I + W FY +P +++ + + + ++ A Sbjct: 1 MTENTKNMLLAAALSLIFIGLWDYFYAFPEMDKQKKALSEQERMAKIPKLGAPEKAAAAA 60 Query: 57 --LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 ++ R AL++SPRV + S+ GSI LKGA+ DD++L+ YH V SPI+TLLSP Sbjct: 61 KPVVRSREAALALSPRVAIDTKSISGSIALKGARVDDVSLKNYHQTVDPRSPIITLLSPE 120 Query: 115 NTKNAYFAELDYVS--TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y+AEL Y+S T N LPN+ T+W LT + P+ L + N ++F+R I Sbjct: 121 EGPEPYYAELGYLSAETENAPVLPNTETLWT-ADADKLTTSQPVTLSWDNGQGLVFKRVI 179 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 S+D+ YL + D+V N + R+ R + + EGF+ V+GD E Sbjct: 180 SIDDEYLLTVKDSVENKGGKPVTLYSYSRVSRVGHPPSAGYAALHEGFVGVIGDTG-QEL 238 Query: 233 KYSDIEKSS--ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQAKF 289 Y IEK F W+G +DKYW +V P + +++ + G + YQA Sbjct: 239 TYDKIEKEPNATKTFKGVGGWVGFTDKYWGAVVAPDQNAPMEARYMLMGGGPVKTYQADT 298 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + T+ P S TT ++FAGAKE T+ Y+ + + RF++LIDWGWFYFI +PMF L Sbjct: 299 VSEPKTLEPNASTATTTYVFAGAKEVDTLDAYKANPGLKRFDLLIDWGWFYFITRPMFRL 358 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + Y ++GNFG+AI+ TV VK F PLA K Y S A MK IQPKI EL+EK+ + Sbjct: 359 IDFLYRVLGNFGLAILAVTVIVKAAFLPLANKSYKSIAKMKEIQPKIKELKEKYGDDKHK 418 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 ++LYK +NP +GC P+LLQIPVFF++YKV+ +++EMRHAPF+GWIKDL+A D Sbjct: 419 -FNMEQMELYKREKVNPASGCLPVLLQIPVFFSLYKVLVVTIEMRHAPFFGWIKDLSAPD 477 Query: 470 PTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 PTN+F LFG++P+ ++ +G+WP++M ++M++QMKM+P P D+ Q + WM Sbjct: 478 PTNVFNLFGLIPWDPTHVAIFGPYLALGVWPLVMGVTMWLQMKMNPEPTDEIQKTMFAWM 537 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 PV+F F + SF +GLIIYWSW+N++SIVQQ VIMK G + L D LR TFS+ Sbjct: 538 PVMFTFTMGSFASGLIIYWSWNNLLSIVQQGVIMKRAGVKFELWDNLRKTFSR 590 >gi|159042884|ref|YP_001531678.1| putative inner membrane protein translocase component YidC [Dinoroseobacter shibae DFL 12] gi|189036349|sp|A8LMA0|OXAA_DINSH RecName: Full=Inner membrane protein oxaA gi|157910644|gb|ABV92077.1| preprotein translocase subunit [Dinoroseobacter shibae DFL 12] Length = 606 Score = 577 bits (1488), Expect = e-162, Method: Composition-based stats. Identities = 231/607 (38%), Positives = 349/607 (57%), Gaps = 32/607 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ----------PNQVDN 51 ++N N +A ALS +++ W F ++P E + + Q + P V Sbjct: 3 DQNKNLILATALSFLVILVW--FLLFPPEEPVTDPNAPTQITQSGETADVALTPPAAVTE 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + A +PRV++ P+L GSI+L G + DDL+LR Y+ + +SPIV LL Sbjct: 61 AAPGAAPQTAATPTENAPRVQIDTPALEGSISLLGGRIDDLSLRNYNETLEPDSPIVRLL 120 Query: 112 SPSNTKNAYFAELDYV--STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 SP + AY+A + T + ++P +NT+W + SG LT TP+ L ++N N ++F Sbjct: 121 SPVDAPGAYYALYGWAPAGTLSFDDVPGANTLWTVESGDTLTVDTPVVLRWENGNGLIFR 180 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 RT+++D+ ++F + +V N + R P G I RH N F + EG +A + D SL Sbjct: 181 RTLAVDDDFMFTVTQSVENTTETDKRMQPYGIIARHGEPDTINFFVLHEGVVA-MADGSL 239 Query: 230 VEQKYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 +E Y D+ E N W+G +DK W + IP+ F S KY+ + Sbjct: 240 IESDYDDMLDYDFVEREGARAEVEQIEQNGWIGFTDKNWMTTLIPTPGQPFTSVAKYVGN 299 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 YQ + T+ G+++T LFAGAKE+ I YE++L I F IDWGWFY Sbjct: 300 A-DIYQTETRLPTQTVPGGQTVTVETRLFAGAKEWEAIRGYERELGIEGFIDSIDWGWFY 358 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ KP+F ++ L+GN G+AI++ T+ +K L PLA K YVS A MK +QP++++L+ Sbjct: 359 FLTKPIFFVLHELNLLIGNMGVAIIVLTLLIKALLLPLAWKSYVSMARMKELQPEMEKLK 418 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK Q LQ AM++LYK +NP AGC PILLQIP+FF++YKVI +++E+RHAPF+G Sbjct: 419 EK-AGDDRQKLQVAMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPFFG 477 Query: 461 WIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 +DL+A DPT+I LFG+LPF P + +GI P+++ +SM++Q K++P P D Sbjct: 478 PFQDLSAPDPTSIMNLFGLLPFASPEPGSILALIFIGILPLLLGISMWLQQKLNPAPTDP 537 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 QAMI W+P VF+F L +F +GLI+YW +NVI+ QQ IM+ HG + L + ++F Sbjct: 538 TQAMIFAWLPWVFMFMLGTFASGLIVYWIANNVITFAQQYFIMRRHGYKPDLFGNIVASF 597 Query: 575 SKNYNSQ 581 K S+ Sbjct: 598 KKKKPSE 604 >gi|56695446|ref|YP_165794.1| putative inner membrane protein translocase component YidC [Ruegeria pomeroyi DSS-3] gi|81676422|sp|Q5LW11|OXAA_SILPO RecName: Full=Inner membrane protein oxaA gi|56677183|gb|AAV93849.1| inner membrane protein YidC, putative [Ruegeria pomeroyi DSS-3] Length = 609 Score = 577 bits (1488), Expect = e-162, Method: Composition-based stats. Identities = 214/609 (35%), Positives = 340/609 (55%), Gaps = 33/609 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYAA 55 ++N N +A ALS +++ W + P E +QT + Sbjct: 3 DQNKNLILATALSFLVILVWFILFPPPEQTEAPATEIATTNGTAVQTPTAAATEGGAGEV 62 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 +D A + +PRV++ P L GS++L G + D+L+L+ Y + + ++ IV +L+P+ Sbjct: 63 PALDSAAPTQAEAPRVQIDTPRLKGSVSLLGGRIDELSLKDYRVSLDEDAEIVEMLTPAG 122 Query: 116 TKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + +AY+A + A N ++P T W+L SG L+ TP+ L + N + + F RT++ Sbjct: 123 STSAYYALYGWAPGAGLNAADVPGPLTEWSLESGDTLSVGTPVTLSWSNGSGVTFRRTLA 182 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK------PQTATNTFGVQEGFIAVLGDK 227 +DE Y+F + +V N S I +P G + RH N F + EG +A + D Sbjct: 183 VDEDYMFTVTQSVENGSAAPIGAAPYGILARHGIGEDADLPGLKNFFILHEGVVA-MNDG 241 Query: 228 SLVEQKYSDIEKSSISNFHE---------SNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 +L E Y D+ K I S+ W+G +D YW + IP T+F S KY Sbjct: 242 TLSEIDYKDVRKFDIDPNEGAQAEVFQNKSDGWIGFTDHYWMATLIPGSGTAFKSAAKY- 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 YQA+ +++ PG+S T LFAGAKE+ +I Y++D + +F IDWGW Sbjct: 301 DARRKIYQAETVLPTMSVAPGESAEVTTRLFAGAKEWESIRAYQQD-GVQKFLDSIDWGW 359 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+F+ KP+F L+ L+GN G +I+ T+ +K + FPLA K YVS A MK +QP+++ Sbjct: 360 FFFLTKPIFWLLHQINGLIGNMGWSIIGLTLIIKAIVFPLALKSYVSMAKMKELQPQMEA 419 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+E Q +Q+ M++LYK +NP AGC PILLQIP+FF++YKVI +++E+R AP+ Sbjct: 420 LKEA-AGDDRQKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRQAPW 478 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +G +DL+ DPT+I FG LP+ P + +GI P+++ +SM++Q K++P P Sbjct: 479 FGPFRDLSMPDPTSIMNFFGWLPWAGPEAGSLTATILIGILPLLLGISMWLQQKLNPAPT 538 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QAMI WMP VF+F L SF +GL++YW +N I+ QQ +IM+ HG + + ++S Sbjct: 539 DPTQAMIFAWMPWVFMFMLGSFASGLVVYWIANNTITFTQQYIIMRSHGYKPDVFGNIKS 598 Query: 573 TFSKNYNSQ 581 F++ + Sbjct: 599 GFARRAKAD 607 >gi|163740285|ref|ZP_02147679.1| putative inner membrane protein translocase component YidC [Phaeobacter gallaeciensis 2.10] gi|161386143|gb|EDQ10518.1| putative inner membrane protein translocase component YidC [Phaeobacter gallaeciensis 2.10] Length = 605 Score = 577 bits (1487), Expect = e-162, Method: Composition-based stats. Identities = 219/605 (36%), Positives = 335/605 (55%), Gaps = 29/605 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY-------PRIEEMNNERKNIQTVKQPNQVDNSYA 54 ++N N +A ALS +++ W F+ + ++ + Sbjct: 3 DQNKNLLLATALSFLVILGWYVFFPPPEPQPQPDAVVAETAPAGDVVSAPAAASPAAGSE 62 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + A+ + +PR+ ++ P + G+I+L G + DDL+L+ Y + + ++ IV +LSP+ Sbjct: 63 GAAVTAEAETAADAPRLTIETPRVSGTISLLGGRLDDLSLKDYRVSLEEDAAIVKMLSPA 122 Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 NAY+A + A ++P +NT+W LTP +P+ L + N + F RTI Sbjct: 123 GDPNAYYALYGWAPGAGLGPDDVPGANTLWQAEGDATLTPDSPVTLTWDNGKGLTFNRTI 182 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVE 231 ++D+ YLF I +VTN S + +P G + RH PQ N F + EG I + D +L E Sbjct: 183 AVDQDYLFTITQSVTNASGSTVALAPYGTLARHGEPQDLKNFFILHEGVIG-MADGTLAE 241 Query: 232 QKYSDIEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 Y D+ + E+N W+G +D YW S +P +F S K + Sbjct: 242 IDYDDMTDFEVDARSGARAEVTQVETNGWIGFTDHYWMSTLVPEPGQAFRSIAK-FDERR 300 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQ +T+ G + T LFAGAKE+ TI Y+KD I F IDWGWF+F+ Sbjct: 301 EIYQTDIVLPTVTVAAGDTSEVTTMLFAGAKEWATIRGYQKD-GIEGFLDSIDWGWFFFL 359 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F ++ + L+GN G AI+ TV +KLL FPLA K Y S A MK +QP+++E++EK Sbjct: 360 TKPIFAVLHWLNALIGNMGWAIIGLTVLIKLLVFPLAYKSYASMAKMKELQPRMEEIKEK 419 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q LQ+ M+ LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G Sbjct: 420 -AGDDRQKLQQEMMALYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPF 478 Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 +DL+A DPT+I LFG+LP P + +GI PI++ +SM++Q K++P P D Q Sbjct: 479 QDLSAPDPTSIMNLFGLLPMAAPVEGTLMATIFIGILPILLGISMWLQQKLNPAPTDPTQ 538 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG + + ++S F K Sbjct: 539 QMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSGFKK 598 Query: 577 NYNSQ 581 ++ Sbjct: 599 TPKAE 603 >gi|99080148|ref|YP_612302.1| putative inner membrane protein translocase component YidC [Ruegeria sp. TM1040] gi|122398415|sp|Q1GJX6|OXAA_SILST RecName: Full=Inner membrane protein oxaA gi|99036428|gb|ABF63040.1| protein translocase subunit yidC [Ruegeria sp. TM1040] Length = 608 Score = 577 bits (1487), Expect = e-162, Method: Composition-based stats. Identities = 219/599 (36%), Positives = 331/599 (55%), Gaps = 30/599 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYP--------RIEEMNNERKNIQTVKQPNQVDNSY 53 ++N N +A ALS +++ W F+ P + E + P+ + Sbjct: 3 DQNKNLLLATALSFLVILGWYFFFPPPEEAPQPATEVTETAPQGDTTAPAAAPSAGAATA 62 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + PR+ + P + GSI+LKG + DDL L+ Y + +SPIVTLLSP Sbjct: 63 EVDAAAAETEITEDVPRLTIDTPRVEGSISLKGGRIDDLRLKDYRETLDDDSPIVTLLSP 122 Query: 114 SNTKNAYFAELDYVSTANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + +AY+A + A ++P +NT+W +G LTP TP+ L + N + F R Sbjct: 123 AGQPHAYYALYGWAPGAGLGIEDVPTANTLWQAEAGATLTPDTPVTLTWDNGKGLTFSRE 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLV 230 +S+DE Y+F I +VTN+S + +P G + RH P N F + EG + + D L Sbjct: 183 VSIDEDYMFSITQSVTNSSGASVALAPYGTLARHGEPANLENFFVLHEGVVG-MADGELS 241 Query: 231 EQKYSDIEK---------SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 E Y D+ + N N W+G + YW S IP+ +F + KY + Sbjct: 242 EIDYDDMTDFDPDPRDGSRAQVNTVTENGWIGFTGHYWMSTLIPAPGEAFRAIAKY-DER 300 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 YQ +T+ G+S + LFAGAKE+ TI YE+ I F IDWGWF+F Sbjct: 301 RDIYQTDVVLPTVTLAAGESTSANTQLFAGAKEWATIREYERA-GIEGFLDSIDWGWFFF 359 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 KP+F ++ + +GN G+AI+ T +K+L FPLA K Y S A MK +QP++++LRE Sbjct: 360 FTKPIFAVLHWLNAAIGNMGVAIIALTFLLKILVFPLAYKSYASMARMKELQPEMEKLRE 419 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + Q +QK M++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHA F+G Sbjct: 420 R-AGDDRQKMQKEMMELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAAFFGP 478 Query: 462 IKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 +DL+ DPT++F LFG+LP+ P + +GI PI++ +SM++Q K++P P D+ Sbjct: 479 FQDLSVPDPTSLFNLFGLLPWAAPAPDSLLSLVFIGILPILLGVSMWVQQKLNPAPTDET 538 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 Q MI WMP VF+F L F +GL++YW +NVI+ QQ +IM+ HG + ++S F Sbjct: 539 QRMIFAWMPWVFMFMLGGFASGLVVYWITNNVITFTQQYLIMRSHGYTPDVFGNIKSGF 597 >gi|163739492|ref|ZP_02146902.1| 60 kDa inner membrane insertion protein [Phaeobacter gallaeciensis BS107] gi|161387245|gb|EDQ11604.1| 60 kDa inner membrane insertion protein [Phaeobacter gallaeciensis BS107] Length = 605 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 219/605 (36%), Positives = 337/605 (55%), Gaps = 29/605 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY-------PRIEEMNNERKNIQTVKQPNQVDNSYA 54 ++N N +A ALS +++ W F+ + ++ + Sbjct: 3 DQNKNLLLATALSFLVILGWYVFFPPPEPQPQPDAVVAETAPAGDVVSAPAAASPAAGSE 62 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + A+ + +PR+ ++ P + G+I+L G + DDL+L+ Y + + ++ IV +LSP+ Sbjct: 63 GAAVTAEAETAADAPRLAIETPRVSGTISLLGGRLDDLSLKDYRVSLEEDAAIVKMLSPA 122 Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 NAY+A + A ++P +NT+W LTP +P+ L + N + F RTI Sbjct: 123 GDPNAYYALYGWAPGAGLGPDDVPGANTLWQAGGDATLTPDSPVTLTWDNGKGLTFNRTI 182 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVE 231 ++D+ YLF I +VTN S + + +P G + RH PQ N F + EG I + D +L E Sbjct: 183 AVDQDYLFTITQSVTNASGNTVALAPYGTLARHGEPQDLKNFFILHEGVIG-MADGTLAE 241 Query: 232 QKYSDIEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 Y D+ + E+N W+G +D YW S +P +F S K + Sbjct: 242 IDYDDMTDFEVDARSGARAEVTQVETNGWIGFTDHYWMSTLVPEPGQAFRSIAK-FDERR 300 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQ +T+ G++ T LFAGAKE+ TI Y+KD I F IDWGWF+F+ Sbjct: 301 EIYQTDIVLPTVTVADGETSEATTMLFAGAKEWATIRGYQKD-GIEGFLDSIDWGWFFFL 359 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F ++ + L+GN G AI+ TV +KLL FPLA K Y S A MK +QP+++E++EK Sbjct: 360 TKPIFAVLHWLNALIGNMGWAIIGLTVLIKLLVFPLAYKSYASMAKMKELQPRMEEIKEK 419 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q LQ+ M+ LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G Sbjct: 420 -AGDDRQKLQQEMMALYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPF 478 Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 +DL+A DPT+I LFG+LP P + +GI PI++ +SM++Q K++P P D Q Sbjct: 479 QDLSAPDPTSIMNLFGLLPMAAPVEGTLMATIFIGILPILLGISMWLQQKLNPAPTDPTQ 538 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG + + ++S F K Sbjct: 539 QMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSGFKK 598 Query: 577 NYNSQ 581 ++ Sbjct: 599 TPKAE 603 >gi|260427287|ref|ZP_05781266.1| inner membrane protein OxaA [Citreicella sp. SE45] gi|260421779|gb|EEX15030.1| inner membrane protein OxaA [Citreicella sp. SE45] Length = 607 Score = 575 bits (1481), Expect = e-161, Method: Composition-based stats. Identities = 205/605 (33%), Positives = 330/605 (54%), Gaps = 29/605 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV----- 56 ++N N +A LS +++ W + P ++ + + + A Sbjct: 3 DQNKNLLIATGLSFVVILIWFLLFPPPEEPAVDQQEPVATAPVEGDAATTPSTATPTEGT 62 Query: 57 --LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + +PR+ + L GSI+L G + D+L L+ Y + + +SP V +L P Sbjct: 63 EGTATAPQAETADAPRLPIDTARLGGSISLTGGRIDELILKDYTVTIDEDSPKVQILEPV 122 Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 T +AY+A + ++P +NT W + SG LT +P+ L + + + F RT+ Sbjct: 123 GTGHAYYALYGWAPGNGLEPADVPGANTEWQVESGSSLTVDSPVTLRWDSPAGLTFRRTV 182 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA-TNTFGVQEGFIAVLGDKSLVE 231 ++D++++F + +V N + +P G + RH F + EG +A + D L E Sbjct: 183 AVDKNFMFTVTQSVENTGEASVSAAPYGIVARHGEPVGRKKFFVLHEGVVA-MADGKLNE 241 Query: 232 QKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 YSD+ + + N W+G +D YW + IPS+ T+F KY +G Sbjct: 242 IDYSDMPDMDMVASEGARADVTQVAENGWIGFTDHYWMTTLIPSQGTAFKQVAKY-DEGR 300 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQ + +T+ PG++ T L+AGAKE+ TI Y +D + RF IDWGWF+F+ Sbjct: 301 DIYQTEAVLPTVTLAPGETQQVTTQLYAGAKEYETIRGY-EDAGVDRFIDSIDWGWFFFL 359 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F L+ + + L+GN G +I+ T+ +K + FPLA K YVS A MK +QP++++L+E+ Sbjct: 360 TKPIFWLLHHLHGLIGNMGWSIIALTITLKAILFPLAFKSYVSMAKMKELQPEMEKLKER 419 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q LQ+ M+QLYK +NP +GC PILLQIP+FF++YKVI ++ E+R AP++G Sbjct: 420 -AGDDRQKLQQEMMQLYKKEKVNPASGCLPILLQIPIFFSLYKVIFVAFELRQAPWFGPF 478 Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 +DL+ DPT+++ LFG+LP+ P + VGI PI++ +SMF+Q K++P PAD Q Sbjct: 479 QDLSTPDPTSLYNLFGLLPWAAPEPGSTLALIFVGILPILLGISMFLQQKLNPAPADPTQ 538 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + ++S F K Sbjct: 539 KMIFAWMPWVFMFMLGGFASGLVVYWITNNTITFTQQYLIMRSQGYTPDVFGNIKSGFKK 598 Query: 577 NYNSQ 581 Sbjct: 599 TPKDD 603 >gi|49474531|ref|YP_032573.1| putative inner membrane protein translocase component YidC [Bartonella quintana str. Toulouse] gi|49240035|emb|CAF26454.1| hypothetical protein BQ09780 [Bartonella quintana str. Toulouse] Length = 613 Score = 573 bits (1478), Expect = e-161, Method: Composition-based stats. Identities = 263/612 (42%), Positives = 377/612 (61%), Gaps = 33/612 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N N+F+AI LS ++ AW FYV P+ ++ +R Q + + ++ D+ Sbjct: 1 MEYNRNFFIAIGLSFGVLIAWHFFYVAPKQAQLQQKRLIAQQLSKQQSTLSTSTPYFSDN 60 Query: 61 -------------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 R +AL+ + R+ +K L GSINL GAQFDDL L+ Y L V Sbjct: 61 ASITHESASIITHPITPEIRNEALAKTNRIAIKTDELEGSINLVGAQFDDLLLKKYRLTV 120 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKI-LTPTTPIKLV 159 SP + LL+P Y AE + S++ + LP S+T W + LTP+TP+ L+ Sbjct: 121 DKKSPEIALLNPKGFTTTYLAEFGFTSSSLSAKALPQSDTQWQIEGNNTTLTPSTPVTLI 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQE 218 + N +F RT+S+D HY+F I D++ N S I S R+ R P TN T+ + E Sbjct: 181 YNNGQGQIFRRTLSVDNHYMFTIEDSIKNESDKPIYLSSYARVARAAPPEHTNATYLLHE 240 Query: 219 GFIAVLGDKSLVEQKYSDIEK---------SSISNFHESNSWLGISDKYWASVFIPSKET 269 G I + D SL +KY + + SI+ W+GI+DKYWA IP ++ Sbjct: 241 GMIGIASD-SLKTEKYKTLAELNPNPDNSQKSITFSKNIGGWIGITDKYWAVAVIPPQDK 299 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + S+F Y + YQ+ + +T+ P ++ TN LFAGAK+ I+HY+ DL I + Sbjct: 300 EYTSRFIYFDRLNTHYQSDLLGSLLTVAPNETKIVTNRLFAGAKQVEIINHYQNDLKIKK 359 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F +LIDWGWF FI KPMF L+ Y GNFGIAI+L TV +K L FPLA K Y S A M Sbjct: 360 FALLIDWGWFDFITKPMFSLIDTLYKQTGNFGIAILLVTVLLKTLLFPLANKSYKSMARM 419 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K IQP + E++EK+ + Q+A+I+LYKT INPLAGCWP+L+Q P+FFA+YKV+ I Sbjct: 420 KLIQPMLLEIKEKYPDDRTK-QQQAIIELYKTQKINPLAGCWPMLIQFPIFFALYKVLYI 478 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 ++EMRHAPF+GWI+DLAA DPT++F LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P Sbjct: 479 TIEMRHAPFFGWIQDLAAPDPTSLFNLFGLLPYTVPTFLMLGAWPLIMGITMFLQMRMNP 538 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D+ QAMI WMPV+F F L+SFP GL+IYW+W+N++SI+QQ+++MK G +I L D Sbjct: 539 APQDQTQAMIFAWMPVIFTFMLASFPVGLVIYWAWNNILSILQQSILMKRQGVKIELFDN 598 Query: 570 LRSTFSKNYNSQ 581 L++ + K+ + Sbjct: 599 LKAMWWKSPKKE 610 >gi|254439216|ref|ZP_05052710.1| 60Kd inner membrane protein [Octadecabacter antarcticus 307] gi|198254662|gb|EDY78976.1| 60Kd inner membrane protein [Octadecabacter antarcticus 307] Length = 590 Score = 573 bits (1477), Expect = e-161, Method: Composition-based stats. Identities = 206/584 (35%), Positives = 330/584 (56%), Gaps = 20/584 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI----QTVKQPNQVDNSYAAVL 57 ++N N +A ALS I++ W + P + E + T+ QV A + Sbjct: 3 DQNKNLILATALSFIVILIWFVLFPPPDVTEPAPTAEVTSTDGTTLGVDAQVPTQVAVLP 62 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A++ +PR+ + + +L GS++L G + DDL+L+ Y + + S++ +V LLSP T+ Sbjct: 63 PLSAEDAIADAPRIMIDSENLTGSLSLTGGRIDDLSLKDYRVTLDSDADLVRLLSPIGTE 122 Query: 118 NAYFAELDYVS--TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 Y+A +V+ A ++P ++T W L SG L P + I L++ N + F +T ++D Sbjct: 123 APYYALNGWVAAVGATADQVPGASTQWQLESGDTLEPGSDITLIWDNGAGLTFRKTFAVD 182 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 E++LF + TV N++ +I P G + RH F EG + + D S+ E Y Sbjct: 183 ENFLFTVTQTVENSTGAEIALRPYGLVARHGEPDQIGFFIQHEGVVR-MSDGSMEEINYG 241 Query: 236 DIEKSSISNFH---ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 D+ + E N W+G SD+YW + IP+ F S K+ ++ YQ + Sbjct: 242 DMPDLTSDEGRIEVEENGWIGFSDQYWMTALIPTPGRDFRSTAKFANN---IYQIETVYP 298 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 T+ G + + FAGA+E+ I Y+ DL I RF IDWGWF+F+ KP+F ++ + Sbjct: 299 LTTVASGATASAETQFFAGAQEWVVIRSYQDDLGIDRFLDSIDWGWFFFLTKPIFAVLHW 358 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 L+GN G +I+ T +K L PLA K YVS A M+ +QP++ +L+E + LQ Sbjct: 359 LNGLIGNMGWSIICLTFVIKALLLPLAYKSYVSMAKMRELQPEMAKLKEA-AGDDREKLQ 417 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 K M+ LYK + +NP +GC PIL+QIP+FF++YKVI +++E+RHAP+ GWI DL+A D + Sbjct: 418 KGMMSLYKENKVNPASGCLPILMQIPIFFSLYKVIFVTIELRHAPWIGWINDLSAPDTST 477 Query: 473 IFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 ++ LFG+LP+ P + +G+ PI++ +SM++Q K++P P D Q MI WMP V Sbjct: 478 LYNLFGLLPWGAPAPDSILALVFIGVMPIVLGISMWLQQKLNPAPTDPTQKMIFAWMPWV 537 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 F+F L SF +GL++YW +N I+ +QQ IM+ G + L + Sbjct: 538 FMFMLGSFASGLVLYWIANNTITFMQQYAIMRSQGFKPDLFGNI 581 >gi|84515675|ref|ZP_01003036.1| putative inner membrane protein translocase component YidC [Loktanella vestfoldensis SKA53] gi|84510117|gb|EAQ06573.1| putative inner membrane protein translocase component YidC [Loktanella vestfoldensis SKA53] Length = 605 Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 207/597 (34%), Positives = 327/597 (54%), Gaps = 23/597 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 E+N N +A LS ++ W + I + Q+V + + Sbjct: 3 EQNRNLILATLLSFAVIMTWTLLFPPEEIAVDPAAQVATQSVDPTVPLADPVTPDATSPA 62 Query: 62 --AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 Q R+ ++ P L GSI++ G + DDL L Y + ++PIV LL P +A Sbjct: 63 IVEQTAPDVARIAIETPELTGSISMLGGRIDDLALTDYRETLDEDAPIVRLLRPVGELDA 122 Query: 120 YFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 YFA + +T +P +T+W++ +G+ LTP+TP+ LV+ N +F IS+D+ Sbjct: 123 YFAAFGWTATDGIDPAAVPGPDTIWSVETGETLTPSTPVTLVWDNGAGQIFRTEISVDDL 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 ++F ++ N + + P G + RH P A F + EG + + D L E YS+ Sbjct: 183 FMFSFAQSIQNVGTETVSARPYGLVRRHGEPSDAKRFFILHEGLVR-MSDGELEETSYSN 241 Query: 237 IEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 I + + + W+G +D +W + IP+ T F S KY + YQ Sbjct: 242 ITDHTFDERERTLADRIDVQQSGWIGYTDHFWMTTLIPATGTPFRSTSKYF-EARDLYQV 300 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + G++ T T LFAGAKE+ I HYE + + RF IDWGWF+F+ KP+F Sbjct: 301 EAVMPPSVVPAGETATVTIRLFAGAKEWEAITHYENETGVDRFIDSIDWGWFFFLTKPIF 360 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ ++GN G +I+ T+ +K L PLA K YVS A MK +QP++++L+E+ Sbjct: 361 WLLHNLNIIIGNMGWSILALTLILKALVLPLAYKSYVSMARMKELQPEMEKLKER-AGDD 419 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q +Q+ M++LYK + +NP AGC PILLQIP+FF++YKVI +++E+RHAP+ GWI DL+A Sbjct: 420 RQAMQQGMMKLYKENTVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPWIGWIDDLSA 479 Query: 468 ADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 DP+++ LFG+LP+ P + +G+ PI++ +SM++Q K++P P D Q MI Sbjct: 480 PDPSSLINLFGLLPYAAPDPGSILSLIFIGLLPILLGISMWMQQKLNPAPTDPTQQMIFA 539 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 WMP VF+F L F +GL++YW +N I+ VQQ IM+ HGA+ + ++S + Sbjct: 540 WMPWVFMFMLGGFASGLVLYWIANNCITFVQQYAIMRSHGAKPDVFGNIKSGLKRKK 596 >gi|149203002|ref|ZP_01879973.1| putative inner membrane protein translocase component YidC [Roseovarius sp. TM1035] gi|149143548|gb|EDM31584.1| putative inner membrane protein translocase component YidC [Roseovarius sp. TM1035] Length = 611 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 213/600 (35%), Positives = 341/600 (56%), Gaps = 24/600 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM---NNERKNIQTVKQPNQVDNSYAAVLI 58 ++N N +A ALS +++ W + P + +++ P+ + A Sbjct: 3 DQNKNLILATALSFVVILVWFVMFPPPEPAPVDPNAAVPTATESLPTPSATGGAEATTAT 62 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A +PR+ + PSL G+I+L+G + DD+ L+ Y + S IV L++P + Sbjct: 63 TAAPVAEPDAPRLTIDTPSLKGTISLQGGRIDDIFLKNYRETIDPASEIVRLMAPVGNET 122 Query: 119 AYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 Y+A + A ++P +NT+W + SG+ LT +TP+ L + N ++F R +S+DE Sbjct: 123 PYYALYGWAPGAGLTPDQVPGANTLWQVESGEKLTTSTPVTLSWDNGAGLIFRRELSVDE 182 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++F + +V N + +P G + RH +P N F + EG I ++ D +L E Y Sbjct: 183 DFMFSVRQSVENTGATAVSLAPYGILARHGRPADLKNFFILHEGLI-MMADGTLSEIDYD 241 Query: 236 DIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 D+E+ + + N W+G +D YW + IP+ +SF + K YQ Sbjct: 242 DVEEYPFNAREGAPAEVTQVTENGWIGFTDHYWMTTLIPAAGSSFKAVAK-FDPQRGIYQ 300 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + T+ PG++ + LFAGAKE+ TI HY+ + + RF IDWGWF+F+ KP+ Sbjct: 301 TEAVQPTQTVEPGQTASAETRLFAGAKEWATIRHYQNEQGVDRFLDSIDWGWFFFLTKPI 360 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F ++ + L+GN G AI+ T+ +K L PLA K YVS A MK++QP++++++E Sbjct: 361 FAVLHWLNALIGNMGWAIIALTLLIKALVLPLAYKSYVSMAKMKDLQPQMEKIKET-AGD 419 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q LQK M++LYK +NP AGC PILLQIP+FF++YKVI ++LE+RHAP+ GWIKDL+ Sbjct: 420 DRQKLQKEMMELYKREKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHAPWVGWIKDLS 479 Query: 467 AADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 A DP+++F L+G+LP+ P + +GI P+ + +SM++Q K++P P D Q MI Sbjct: 480 APDPSSLFNLWGVLPWAAPEPGSIMALIFIGILPLALGISMWLQQKLNPSPTDPTQKMIF 539 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 WMP VF+F L SF +GL+IYW +NVI+ QQ +IM+ G + + + S F + + Sbjct: 540 AWMPWVFMFMLGSFASGLVIYWIANNVITFSQQYMIMRSQGYKPDVFGNITSGFKREKPA 599 >gi|240850503|ref|YP_002971902.1| preprotein translocase subunit YidC [Bartonella grahamii as4aup] gi|240267626|gb|ACS51214.1| preprotein translocase subunit YidC [Bartonella grahamii as4aup] Length = 612 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 261/611 (42%), Positives = 374/611 (61%), Gaps = 32/611 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT------------------ 42 ME N N+F+AI LS +++ AWQ +V P+ ++ ++ Q Sbjct: 1 MEYNRNFFIAIGLSFVVLIAWQFLHVAPKQAKLQKQQVITQQLSKQQSTLSTTTTNFSDD 60 Query: 43 VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + + R L+ + R+ +K L GSINL GAQFDDL+L+ Y L V Sbjct: 61 TSTHQATSIIEQPMTPEIRKAVLAKTKRIAIKTNELEGSINLVGAQFDDLHLKKYRLTVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKI-LTPTTPIKLVF 160 SP + LL+P K Y AE + S + + LP S+T W + LTP+TPI L++ Sbjct: 121 KKSPEIDLLNPKGFKTTYLAEFGFASASLPAKALPQSDTQWQIEGNNTILTPSTPITLIY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 N +F R +S+D+H++F I D+++N S I S R+ R P TN T+ + EG Sbjct: 181 NNGQGQIFRRILSVDDHFMFTIEDSISNESDQPIYLSSYARVARAAPPEHTNATYLLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEK---------SSISNFHESNSWLGISDKYWASVFIPSKETS 270 I + GD SL +KY + + S++ + W+GI+DKYWA IP + Sbjct: 241 MIGIAGD-SLKTEKYKTLAELDPNPDNGQKSMTFSKVTGGWIGITDKYWAVAVIPPQNKE 299 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + S+F Y YQ+ + +TI P ++ T TN LFAGAK+ I++Y+ DL I +F Sbjct: 300 YTSRFIYFDRLQTHYQSDLLGSLLTIAPNETKTITNRLFAGAKQVEIINNYQNDLKIKKF 359 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +LIDWGWF FI KPMF L+ Y GNFGIAI+L TV +K L FPLA K Y S A MK Sbjct: 360 ALLIDWGWFDFITKPMFSLIDVLYKQTGNFGIAILLVTVLLKTLLFPLANKSYKSMARMK 419 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QP++ E++EK+ + Q+A+I+LYKT INPLAGCWP+L+Q P+FFA+YKV+ I+ Sbjct: 420 LLQPRLLEIKEKYPDDKTK-QQQAIIELYKTEKINPLAGCWPMLVQFPIFFALYKVLYIT 478 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWIKDLAA DPT++F LFG+LP+ P F+ +G WP+IM ++MF+QM+M+P Sbjct: 479 IEMRHAPFFGWIKDLAAPDPTSLFNLFGLLPYTTPTFLMIGAWPLIMGITMFLQMRMNPA 538 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D+ QAMI WMPVVF F L+SFP GL+IYW+W+N++SI+QQ ++MK G +I L D L Sbjct: 539 PQDQSQAMIFTWMPVVFTFMLASFPVGLVIYWAWNNILSIIQQGIMMKRQGVKIELFDNL 598 Query: 571 RSTFSKNYNSQ 581 ++ + K+ + Sbjct: 599 KTMWRKSPKKE 609 >gi|49475954|ref|YP_033995.1| putative inner membrane protein translocase component YidC [Bartonella henselae str. Houston-1] gi|49238762|emb|CAF28023.1| hypothetical protein BH12410 [Bartonella henselae str. Houston-1] Length = 612 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 265/611 (43%), Positives = 378/611 (61%), Gaps = 32/611 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N N+F+AI LS ++ AW FYV P+ E+ ++ Q + + +S A D Sbjct: 1 MEYNRNFFIAIGLSFGVLIAWHFFYVAPKQTELQQKQLIAQQLLKQQSAVSSPTANFSDS 60 Query: 61 ------------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 R L+ + RV +K L GSINL GAQFDDL L+ Y L V Sbjct: 61 ASTHESALIINHPMSPEIRDAELAKTNRVAIKTNELEGSINLVGAQFDDLLLKKYRLTVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKI-LTPTTPIKLVF 160 S + LL+P K Y AE + S++ + + LP S+T W++ LTP+TP+ L++ Sbjct: 121 KKSSEIALLNPKGFKETYLAEFGFTSSSLSKDALPQSDTRWHIEGNNTTLTPSTPVTLIY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 N F R +S+D+HY+F I D++TN S I S R+ R P TN T+ + EG Sbjct: 181 NNGQGQTFRRILSIDDHYMFTIEDSITNESDKPIYLSSYARVARAAPPEHTNATYLLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEK---------SSISNFHESNSWLGISDKYWASVFIPSKETS 270 I + GD SL +KY + + S++ W+GI+DKYWA IP ++ Sbjct: 241 MIGIAGD-SLKTEKYKTLAELNPNPDNGQKSMTFSKVIGGWVGITDKYWAVAVIPPQDKE 299 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + S+F Y YQ+ + +T+ P ++ T TN LFAGAK+ I+HY+ DL I +F Sbjct: 300 YTSRFIYFDRLQTHYQSDLLGSLLTVAPNETKTITNRLFAGAKQVEIINHYQNDLKIKKF 359 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +LIDWGWF FI KPMF L+ Y GNFGIAI+L TV +K L FPLA K Y S A MK Sbjct: 360 ALLIDWGWFDFITKPMFSLIDILYKQTGNFGIAILLVTVLLKTLLFPLANKSYKSMARMK 419 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 IQP + E++EK+ + + Q+A+I+LYKT INPLAGCWP+L+Q P+FFA+YKV+ I+ Sbjct: 420 LIQPMLLEIKEKYPEDRTK-QQQAIIELYKTQKINPLAGCWPMLVQFPIFFALYKVLYIT 478 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT++F LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P Sbjct: 479 IEMRHAPFFGWIQDLAAPDPTSLFNLFGLLPYTVPAFLMLGAWPLIMGITMFLQMRMNPA 538 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D+ QAMI WMP+VF F L+SFP GL+IYW+W+N++S++QQ ++MK G +I L D L Sbjct: 539 PQDQTQAMIFAWMPIVFTFMLASFPVGLVIYWAWNNILSMIQQGIMMKRQGVKIELFDNL 598 Query: 571 RSTFSKNYNSQ 581 ++ + K+ + Sbjct: 599 KAMWRKSPKKE 609 >gi|254512338|ref|ZP_05124405.1| 60 kDa inner membrane insertion protein [Rhodobacteraceae bacterium KLH11] gi|221536049|gb|EEE39037.1| 60 kDa inner membrane insertion protein [Rhodobacteraceae bacterium KLH11] Length = 607 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 210/607 (34%), Positives = 335/607 (55%), Gaps = 31/607 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI----QTVKQPNQVDNSYAAVL 57 ++N N +A LS +++ W + P + + V+ P+ Sbjct: 3 DQNKNLILATVLSFLVIIVWFVLFPPPEPTPGEEQAEIAVLEGDEVQTPSASGTVGEVTA 62 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + A +PRV++ P L GS++L G + D+L L+ Y + + +PIV LL+P T+ Sbjct: 63 ATEEALPEEQAPRVQIDTPRLKGSLSLSGGRIDELFLKDYKVSIEEGAPIVELLAPVGTE 122 Query: 118 NAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 +AY+A + A ++P NTVW L G++L P+ LV++N N + F R IS+D Sbjct: 123 SAYYALYGWAPAAGLAGADVPGPNTVWALEQGEVLGVDAPVTLVWENGNGLTFRRMISVD 182 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK------PQTATNTFGVQEGFIAVLGDKSL 229 + Y+F + +V N + ++ +P G + RH N F + EG I + D +L Sbjct: 183 QDYMFTVTQSVENGTQSEVGMAPYGILARHGIGEDGDLPGLKNFFILHEGVIG-MSDGTL 241 Query: 230 VEQKYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 E Y D+ I + W+G +D YW + IP ++F + KY S Sbjct: 242 TEVDYGDVRDFDIDPIERAQAEVYQVNQDGWIGFTDHYWMTTLIPEPGSAFKAAAKYDSR 301 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 YQ + +T+ PG++ T LFAGAKE+ TI Y+ + + +F IDWGWF+ Sbjct: 302 -RKIYQTETVLPTVTVAPGETTEVTTRLFAGAKEWETIREYQAE-GVQKFIDSIDWGWFF 359 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ KP+F L+ L+GN G +I+ T+ +K + FPLA K YVS A MK +QP+++ L+ Sbjct: 360 FLTKPIFWLLHNINALIGNMGWSIIGLTLIIKAILFPLAYKSYVSMAKMKELQPQMEALK 419 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E Q +Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+R AP++G Sbjct: 420 EA-AGDDRQKMQQGMMELYKKEKVNPAAGCLPILMQIPIFFSLYKVIFVTIELRQAPWFG 478 Query: 461 WIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 +DL+A DPT+I LFG+LPF P + +GI P+++ +SM++Q K++P P D Sbjct: 479 PFQDLSAPDPTSIMNLFGLLPFAGPQPDTFLALIFIGILPLLLGISMWLQQKLNPAPTDP 538 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 QAMI WMP VF+F L SF +GL++YW +N I+ QQ +IM+ G + + ++S F Sbjct: 539 TQAMIFAWMPWVFMFMLGSFSSGLVVYWIANNTITFTQQYLIMRSQGYKPDVFGNIKSGF 598 Query: 575 SKNYNSQ 581 + + Sbjct: 599 KRTPKTD 605 >gi|254477563|ref|ZP_05090949.1| 60 kDa inner membrane insertion protein [Ruegeria sp. R11] gi|214031806|gb|EEB72641.1| 60 kDa inner membrane insertion protein [Ruegeria sp. R11] Length = 604 Score = 571 bits (1472), Expect = e-160, Method: Composition-based stats. Identities = 227/605 (37%), Positives = 345/605 (57%), Gaps = 29/605 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRI-----EEMNNERKNIQTVKQPNQVDNSYAAV 56 ++N N +A ALS +++ W F+ P E+ V P+ Sbjct: 3 DQNKNLLLATALSFLVILGWYIFFPPPEPAPQPDAEIAQTAPAGDGVSAPSAAQAIAGDA 62 Query: 57 LIDDRAQALSMS--PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 A+A + + PRV + + G+I+L+G + DDL L+ Y + + +SPIV +LSP+ Sbjct: 63 AAAGAAEAETAADAPRVAIDTARVTGTISLQGGRLDDLALKDYRVSLEPDSPIVKMLSPA 122 Query: 115 NTKNAYFAELDYVSTANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 + NAY+A + A ++P +NT+W+L G+ LTP TP+ L ++N + F RTI Sbjct: 123 GSPNAYYALYGWAPGAGLGIDDVPGANTLWSLHEGETLTPETPVTLSWRNGKGLTFFRTI 182 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVE 231 S+DE+Y+F++V +V N + +P G I RH PQ N F + EG + + D +L E Sbjct: 183 SIDENYMFQVVQSVMNEGAGTVSLAPYGTIARHGMPQDLKNFFILHEGVVG-MADGTLAE 241 Query: 232 QKYSDIEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 Y D+ + E N W+G +D YW S +P SF S K + Sbjct: 242 IDYDDMADFDLDARSGARSEITQVEGNGWIGFTDHYWMSTLVPEPGQSFRSIAK-FDERR 300 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQ +T+ G+ T LFAGAKE+ TI Y+KD I F IDWGWF+F+ Sbjct: 301 EIYQTDVVLPTVTLANGEGTEVTTELFAGAKEWATIRGYQKD-GIEGFLDSIDWGWFFFL 359 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F ++ + L+GN G AI+ TV +K+L FPLA K Y S A MK +QP++++++EK Sbjct: 360 TKPIFAVLHWLNALIGNMGWAIIGLTVLIKILVFPLAYKSYASMAKMKELQPEMEKIKEK 419 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q LQ+ M+ LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G Sbjct: 420 -AGDDRQKLQQEMMALYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPF 478 Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 +DL+A DPT+I LFG+LPF P + +GI P+++ +SM++Q K++P P D Q Sbjct: 479 QDLSAPDPTSIMNLFGLLPFTGPEPGSILATVLIGILPLLLGISMWLQQKLNPAPTDPTQ 538 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG + + ++S+F K Sbjct: 539 QMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSSFKK 598 Query: 577 NYNSQ 581 + ++ Sbjct: 599 SPKAE 603 >gi|83854933|ref|ZP_00948463.1| putative inner membrane protein translocase component YidC [Sulfitobacter sp. NAS-14.1] gi|83842776|gb|EAP81943.1| putative inner membrane protein translocase component YidC [Sulfitobacter sp. NAS-14.1] Length = 604 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 220/598 (36%), Positives = 340/598 (56%), Gaps = 28/598 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ---VDNSYAAV-- 56 ++N N A LS I++ W + P E + + Q + V +S A Sbjct: 3 DQNKNLIFATVLSFIVILGWFLLFPPPETETITDPAATQQVTDATSTEAIVPSSAGAADN 62 Query: 57 ---LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 D+ AL +PR+ ++ + GSI+L G + DDL+L+ Y+ + +SPIV+LLSP Sbjct: 63 VTDASDEATAALEEAPRIPVETARISGSISLLGGRVDDLHLKDYNTTIEKDSPIVSLLSP 122 Query: 114 SNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + T +AY+A + A ++P NT+W L G+ L+ TP+ L + N LF RT Sbjct: 123 AGTPDAYYALYGWAPGAGIAPEQVPGPNTLWTLSQGETLSVETPVTLTWDNDAGQLFSRT 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLV 230 IS+DE+Y+FKI V N S + + +P G I RH P A N F + EG +A + + L+ Sbjct: 183 ISIDENYMFKIEQKVENTSENTVSLAPYGLIARHGIPSDAQNFFILHEGLVA-MNNGELL 241 Query: 231 EQKYSDIEKSSISNFH-------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 E + DI + + N +N W+G + Y+ + IP E KYL Sbjct: 242 ETAWDDIPELDVVNGVPSKRIDGVTNGWIGFTGHYFMTNLIPDPEQPTRLTVKYLPRTE- 300 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 +Q + T+ G++ T T LFAGAKE+ + YE + +F IDWGWF+F+ Sbjct: 301 IFQTESVMPTQTVASGQTATVTTQLFAGAKEWEILRDYEAQ-GVYKFIDSIDWGWFFFLT 359 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F ++ + L+GN G+AI+ T+ +K L FPLA K YVS A MK +QP++++L++ Sbjct: 360 KPIFWVLHHLNLLIGNMGVAIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMEKLKKD- 418 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q LQ+ M++LYK +NP AGC PILLQIP+FF++YKVI ++LE+RHAPF+G + Sbjct: 419 AGDDRQKLQQGMMELYKREKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHAPFFGPFQ 478 Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+A DPT+IF +G+LP+ P + +GI P+++ +SMF+Q K++P P D Q Sbjct: 479 DLSAPDPTSIFNFYGLLPWAAPEAGTVLALVFIGILPLLLGISMFLQQKLNPAPTDPTQQ 538 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + ++ ++ + Sbjct: 539 MIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDILGNIKGSMK 596 >gi|296444656|ref|ZP_06886620.1| membrane protein insertase, YidC/Oxa1 family [Methylosinus trichosporium OB3b] gi|296257924|gb|EFH04987.1| membrane protein insertase, YidC/Oxa1 family [Methylosinus trichosporium OB3b] Length = 610 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 235/611 (38%), Positives = 350/611 (57%), Gaps = 36/611 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI--QTVKQPNQVDNSYAA---- 55 E N +A LS++ + AW FY +P++E+ + +T + AA Sbjct: 3 EYTKNVIIAAGLSMLFIGAWDYFYAFPKLEQERQTQAEQIKKTAQAQAPAARKPAAPETK 62 Query: 56 -----------------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 + R AL+ SPR+ + PS+ GSI L G + DD++L+ YH Sbjct: 63 QAQAPTATQQQPAAAQKPVKKTREAALAESPRIAIDTPSIAGSIALVGGRIDDVSLKNYH 122 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 V SPI+ LLSP N + Y+AE +++ A + LPN+ T+W L+ P+ L Sbjct: 123 ETVDPKSPIIVLLSPENGPDPYYAETGFLA-AGDAALPNAQTLWT-ADRTTLSAAQPVTL 180 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 + N ++F+R I++D+ Y+F + D+V N++ + R+ R + E Sbjct: 181 SYDNGQGLVFKRKIAVDDRYMFTVADSVENHADKPVTLYSYMRVARVGIPAGAGYAALHE 240 Query: 219 GFIAVLGDKSLVEQKYSDIEKSS--ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 GFI V+G+ + E KY +EK + WLG ++KYWA+V +P ++ F ++F Sbjct: 241 GFIGVIGESGVQEMKYEKVEKEPHATKTLSGTGGWLGFTEKYWAAVAVPQQDKPFEARFS 300 Query: 277 YLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 G + YQA +TI PG S T+ +FAGAK + Y+ I F++LID Sbjct: 301 ATGAGTVKAYQADTVGAPLTIQPGASGETSQRIFAGAKVVDMLDAYQAQ-GIEHFDLLID 359 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWFYF+ +PMF L+ ++++GNFG+AI+ TV VK+ F PLA K Y + A MK +QPK Sbjct: 360 WGWFYFLTRPMFRLIDNLFHVLGNFGLAILAVTVLVKIAFLPLANKSYQAVAKMKEVQPK 419 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I L+EK+ Q L + + L+K INP GC P+LLQIPVFF++YKV+ I++EMRH Sbjct: 420 IQALKEKYGDDK-QTLSREQMALFKREKINPAGGCLPMLLQIPVFFSLYKVLVITIEMRH 478 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSP 509 APF+GWIKDL+A DPTNIF LFG++PF F+ +G+WPIIM +M++QMKM+P Sbjct: 479 APFYGWIKDLSAPDPTNIFNLFGLIPFDPTQIPLFGSFLWLGVWPIIMGFTMWMQMKMNP 538 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D+ Q + WMPV+F F+L SF +GL+IYWSW+N++S+ QQ IM+ G + L D Sbjct: 539 EPTDEIQRIAFAWMPVIFTFSLGSFASGLVIYWSWNNILSVTQQWYIMRRAGVKFELWDN 598 Query: 570 LRSTFSKNYNS 580 L+ TF + Sbjct: 599 LKKTFDFKKKA 609 >gi|255264683|ref|ZP_05344025.1| 60 kDa inner membrane insertion protein [Thalassiobium sp. R2A62] gi|255107018|gb|EET49692.1| 60 kDa inner membrane insertion protein [Thalassiobium sp. R2A62] Length = 601 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 204/601 (33%), Positives = 330/601 (54%), Gaps = 26/601 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID-- 59 ++N N +A ALS +++ W + + Q++ Sbjct: 3 DQNKNLILATALSFLVILVWFVLFPPEEPVVDPITAETAQSIDGATVPTADTGIAPTTGE 62 Query: 60 ---DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 ++ S +PR+ ++ L GSI+L G + DDL+L+ Y +++ + +V LLSP T Sbjct: 63 AEPEQEAEASDAPRIAIETEKLSGSISLLGGRLDDLSLKDYPIELDAEE-VVRLLSPVGT 121 Query: 117 KNAYFAELDYVSTANNIE--LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 NAY+A + + +P NT+W + SG L + + L + N + F R IS+ Sbjct: 122 DNAYYALYGWAAAQGVAADAVPGPNTLWTVESGDTLNTSDAVTLAWDNGAGLTFRREISV 181 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 DE Y+F I +V N + ++ +P G I RH F + EG + + D L E Y Sbjct: 182 DEDYMFNITQSVENTTSTEVALAPYGFIARHGEPDTVGFFILHEGVVR-MSDGELQEIDY 240 Query: 235 SDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 +D+ I + N W+G +DKYW + +P++ ++F S Y + + Y Sbjct: 241 NDMPDFDIDARRGAPAESIDVTENGWVGFTDKYWMTNIVPTQGSAFKSSAIY-NPRNDIY 299 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 Q + T+ G + + LFAGAKE+ I +Y+ D I F IDWGWF+F+ KP Sbjct: 300 QTEALMPTQTVAVGATAAVSTQLFAGAKEWEAIRNYQNDGGIDGFLDSIDWGWFFFLTKP 359 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++GN G +I++ T+ +K + PLA K YVS A MK +QP++++L+E Sbjct: 360 IFALLHWLNGVIGNMGWSIIVLTLIIKAILLPLAYKSYVSMARMKELQPEMEKLKEA-SG 418 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q LQ+ M++LYK + +NP +GC PILLQIP+FF++YKVI +++E+RHA + GWI+DL Sbjct: 419 DDRQKLQQGMMKLYKDNKVNPASGCVPILLQIPIFFSLYKVIFVTIELRHAEWMGWIRDL 478 Query: 466 AAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 +A DP++I LFG+LPF P + +G+ PII+ +SM++Q K++P P D Q MI Sbjct: 479 SAPDPSSILNLFGLLPFNTPESGSLLFILSLGVLPIILGISMWMQQKLNPAPTDPTQKMI 538 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 WMP VF+F L SF +GL++YW +N I+ QQ +IM+ G + + +R++ S+ Sbjct: 539 FAWMPWVFMFMLGSFASGLVLYWIANNTITFTQQYLIMRSQGVKPDVFGNIRASLSRKKT 598 Query: 580 S 580 Sbjct: 599 D 599 >gi|126724910|ref|ZP_01740753.1| putative inner membrane protein translocase component YidC [Rhodobacterales bacterium HTCC2150] gi|126706074|gb|EBA05164.1| putative inner membrane protein translocase component YidC [Rhodobacterales bacterium HTCC2150] Length = 620 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 220/601 (36%), Positives = 334/601 (55%), Gaps = 28/601 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN-------SYA 54 + N N +A+ALSV+++ AW F+ P E Q+ D S Sbjct: 3 DENKNLLLAMALSVMVIIAWSIFFPAPVDETPVAATSGEQSTTAGVSADAGSDVAAVSNV 62 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + R ALS + R ++ P L GSI+ G + DDL+L+ Y +++ S IVTLL+P Sbjct: 63 PTSAEVRTAALSSATRADIDTPRLSGSISTLGGRIDDLSLKDYRIELDEASDIVTLLTPE 122 Query: 115 NTKNAYFAELDYVSTANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 T++AY+A + + ++P T W + + LTP TP+ LV++N + F + I Sbjct: 123 GTQDAYYALYGWAPGGDLGWDDVPGPETQWAIEGNEKLTPETPVTLVWENTTGMTFRQII 182 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVE 231 S+D +LF + V+NN R +P +I RH P F + EG I G+ E Sbjct: 183 SVDADFLFSVQQEVSNNGSTAARLAPYSQIRRHGEPTDMKGFFILHEGAIRQSGESQ-KE 241 Query: 232 QKYSDIEKSSISNF---------HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 YSD+ + SN WLG +D YW + IP F S +Y + Sbjct: 242 YDYSDLADFDRDDQWGDRSDVVDVASNGWLGFTDHYWMTALIPESAQPFKSVLQYKAQ-Q 300 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y ++ +T+ G++ T T FAGAKE+ I YE + I RF IDWGWFYF+ Sbjct: 301 DVYLSETRLPTLTVEAGQTNTVTTHFFAGAKEWAVIREYEANNGIYRFIDSIDWGWFYFL 360 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F ++ ++GN G +I+ T+ +K L FPLA K YVS A MK +QP++ E++EK Sbjct: 361 TKPIFWVLHSLNGIIGNMGWSIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMAEIKEK 420 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +V QK +++LYK +NP +GC PILLQIP+FF++YKVI +++++RHAP+ GWI Sbjct: 421 AGDDKSKV-QKEIMELYKKEKVNPASGCLPILLQIPIFFSLYKVIFVTIDLRHAPWVGWI 479 Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 KDL+A D +++F LFGILP+ P + +G+ P+++ +SM++Q K++P P D Q Sbjct: 480 KDLSAPDTSSLFNLFGILPWDSPEPGSIMALIFIGVLPLLLGISMWLQQKLNPAPTDATQ 539 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 AMI WMP VF+F L SF +GL++YW +N I+ QQ +IM+ G + + + S+F K Sbjct: 540 AMIFAWMPWVFMFMLGSFASGLVVYWIANNTITFTQQYLIMRSQGFKPDVFGNIMSSFKK 599 Query: 577 N 577 Sbjct: 600 K 600 >gi|89053128|ref|YP_508579.1| putative inner membrane protein translocase component YidC [Jannaschia sp. CCS1] gi|122499543|sp|Q28UQ8|OXAA_JANSC RecName: Full=Inner membrane protein oxaA gi|88862677|gb|ABD53554.1| protein translocase subunit yidC [Jannaschia sp. CCS1] Length = 626 Score = 568 bits (1464), Expect = e-159, Method: Composition-based stats. Identities = 224/627 (35%), Positives = 346/627 (55%), Gaps = 51/627 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ-----------TVKQPNQVD 50 ++N N +A LS +++ W + P + E N + P V Sbjct: 3 DQNRNLILATGLSFVVILVWFLLFPPPEMVEDPNAIPPAAETGGVETDTGIALTPPVTVA 62 Query: 51 NSYAAVLIDDRAQ-ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 ++ A ++ ALS + R+++ P++ GSI+L G + DDL+LR Y +V + IV Sbjct: 63 DAPAGADTTAPSEVALSEAARIDIDTPAVEGSISLLGGRIDDLSLRNYFTEVDGDQ-IVR 121 Query: 110 LLSPSNTKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 LLSP + + Y+A + + + ++P S+T W L SG ILTP +PI L + N + ++ Sbjct: 122 LLSPVGSDDPYYALYGWTPSGDLGYADVPTSDTPWELESGTILTPDSPITLAWDNGSGLI 181 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGD 226 F RTI +D+ ++F++ +V N ++ +P G + RH P N F + EG + + D Sbjct: 182 FRRTIEIDDRFMFQVTQSVENTGGAEVNLAPYGIVARHGLPSDLQNFFILHEGVVRKV-D 240 Query: 227 KSLVEQKYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 L E YSD+ I E+N W+G +DKYW + IP + SF S KY Sbjct: 241 GELSELGYSDLPDLDIIAREGVPAEVMEVETNGWIGFTDKYWMTTLIPGENQSFVSVVKY 300 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL------------ 325 + YQ + ++I PG++ T LFAGAKE I YE Sbjct: 301 VPSAE-IYQTEARLPYMSIAPGETAEVTTQLFAGAKEAEAIRDYENAEPGLIASLFGAEQ 359 Query: 326 -----AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 IPRF IDWGWFYF+ KP+F L+ + +GN G+AI+ T+ VK + FPLA Sbjct: 360 DASRGEIPRFIDSIDWGWFYFLTKPLFWLLHWLNGAIGNMGLAIISLTLIVKAVLFPLAY 419 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 + YVS A MK +QP+I++L+E Q LQ+ M++LYK + +NP GC PILLQIP+F Sbjct: 420 RSYVSMAKMKELQPEIEKLKES-AGDDRQKLQQGMMELYKKNKVNPAGGCLPILLQIPIF 478 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWP 494 F++YKVI ++LE+RHAPF+GW+ DL+A D ++I L+G+LP P + +GI P Sbjct: 479 FSLYKVIFVTLELRHAPFFGWLNDLSAPDSSSIINLYGLLPNPAPEPESIMALIFIGILP 538 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 +++ +SM++Q K++P P D QA I W+P VF+F L SF +GL++YW +N ++ QQ Sbjct: 539 LLLGISMWLQQKLNPAPTDAMQAQIFAWLPWVFMFMLGSFASGLLVYWIANNTLTFTQQY 598 Query: 555 VIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +IM+ G + + +RS+F K + Sbjct: 599 LIMRSQGFKPDVFGNIRSSFKKKAKEE 625 >gi|148556519|ref|YP_001264101.1| putative inner membrane protein translocase component YidC [Sphingomonas wittichii RW1] gi|148501709|gb|ABQ69963.1| protein translocase subunit yidC [Sphingomonas wittichii RW1] Length = 577 Score = 568 bits (1463), Expect = e-159, Method: Composition-based stats. Identities = 211/570 (37%), Positives = 322/570 (56%), Gaps = 12/570 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 ME N +AI LS ++++ WQ F+ + E + + QP + Sbjct: 1 MENQRNMILAIVLSALVLFGWQFLGDRFFPPAKPPVTKIEGGQEKVLPQPGADPAAAGPK 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 I RA L +PRV + P L GSINLKGA+ DDL L+ Y V+ N+P + LLSP + Sbjct: 61 AIRARAAVLRETPRVAIDTPKLAGSINLKGARIDDLVLKAYRETVAKNAPPIRLLSPLGS 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 AY+A + T + ++ P NTVW SG LTP TP+ L + N FE I++D Sbjct: 121 PAAYYAGFGW--TGDGVDAPGPNTVWT-ASGTALTPETPVTLSWTNTRGQRFETVIAVDR 177 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y+F I + N + P G I + +++ + G I V D + + + Sbjct: 178 DYMFTITQKLVNGGAGAVAARPYGLISKDGVSKDPSSWTLHTGPIGVFNDAANYDLSFKK 237 Query: 237 IEKSSIS--NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 ++++ F + WLG DKYW + +P + S + F LS YQA S + Sbjct: 238 LDEAGQPGIRFASTGGWLGFGDKYWLTALVPDSKASVDAGF--LSTAPQVYQAVESGRAL 295 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I PG++ + + FAGAKE + YE D +P F IDWGWF + KP+F ++ + Sbjct: 296 VIAPGQAGSVSQRFFAGAKEVALLDRYENDQGVPLFSRAIDWGWFRVLEKPIFWVLDQVF 355 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 LVGNFG+AI++ T V+ L FP+A+KQ+ S A M+ +QPK+ EL+E+ K P+ LQ+ Sbjct: 356 KLVGNFGVAIIILTFLVRGLMFPIAQKQFRSMAGMRRVQPKMKELQERLKDDKPR-LQQE 414 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +++LY+ +NPLAGC PIL+QIPVF+A+YKV+ +++EMRH PF WI+DL+A DP ++ Sbjct: 415 LLKLYQEEKVNPLAGCLPILVQIPVFYALYKVLMVTIEMRHQPFVLWIRDLSAPDPLHVL 474 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 LFG+L F P F+ +G+ +++ +SM++Q K++P P D Q + MP + +F ++ F Sbjct: 475 NLFGLLDFTPPAFLGIGVLALLLGVSMWLQFKLNPQPMDDAQKQVFALMPWIMMFIMAPF 534 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 AGL+IYW SN ++I QQA + + H E Sbjct: 535 AAGLLIYWVTSNFLTIAQQAWLYRQHPVEP 564 >gi|114327390|ref|YP_744547.1| 60 kDa inner membrane protein YIDC [Granulibacter bethesdensis CGDNIH1] gi|122327634|sp|Q0BU78|OXAA_GRABC RecName: Full=Inner membrane protein oxaA gi|114315564|gb|ABI61624.1| 60 kDa inner membrane protein YIDC [Granulibacter bethesdensis CGDNIH1] Length = 578 Score = 566 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 215/573 (37%), Positives = 320/573 (55%), Gaps = 16/573 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK-QPNQVDNSYAAVLID 59 M++ F+AIA+S+ I+ +Q Y + E R + +PN + Sbjct: 1 MDQ-KRLFLAIAISLGILLGFQGLYRHFVPEPPAAARTATNAGQGKPNNTLGAVPTDATA 59 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 ++ R+ + P + GSI+L GA+FDDL LR YH V NSP+V LL+P + Sbjct: 60 SQSPPPKEGARLAVDAPRVKGSISLVGARFDDLVLRDYHETVDKNSPLVRLLAPLSGDEP 119 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 Y+ E +V + I P +T W LTP P+ L + N + F +++D Y+ Sbjct: 120 YYVEYGWVPEESGIATPGRDTEWK-ADAATLTPNKPVTLSWDNGAGLTFMLKVAVDADYM 178 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F + +V N + + P R+ R + EG I V+ D L E Y + Sbjct: 179 FSVTQSVRNTTGKPVVLHPYARVRRDYRPEVEGYTVLHEGLIGVV-DGILHEITYKSADS 237 Query: 240 SSISN------FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSA- 291 N + W GI+DKYW + IP + TS F+ +G YQ + Sbjct: 238 DGAKNNGLAFEHASTGGWAGITDKYWLTALIPDQITSVDFSFRDTKPNGRDGYQVGIISH 297 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 N + G +T LFAGAK + HY+ + IP F +D+GWF+FI +P F + Sbjct: 298 NPDQVAAGAESASTTHLFAGAKVVSLLDHYQAEYHIPSFWEAVDFGWFWFITRPFFYALD 357 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + Y+LVGNFG+AI++ TV VK F+PLA K Y S + M+ + PKI LRE++K P + + Sbjct: 358 WLYHLVGNFGVAILIFTVLVKAAFYPLASKSYRSMSKMRLLAPKIQSLRERYKDDPTR-M 416 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ ++QLYK NP +GC P+LLQ P+FF++YKVI +++EMRHAPF+GWI DL+A DPT Sbjct: 417 QQEVMQLYKAEGANPASGCLPMLLQFPIFFSLYKVIFVTIEMRHAPFFGWIHDLSAVDPT 476 Query: 472 NIFTLFGILPF---YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 N+F LFG+LPF ++ F+H+GIWP+IM +M++Q KM+PP D QA + +MP++F Sbjct: 477 NLFNLFGLLPFDPTHISPFLHLGIWPLIMGGTMYLQQKMNPPMPDPVQARMFQFMPIIFT 536 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F L+ FP GL+IYWSW+N++SI QQ +I + Sbjct: 537 FMLARFPVGLVIYWSWNNLLSIGQQWLIQRRTK 569 >gi|163745583|ref|ZP_02152943.1| putative inner membrane protein translocase component YidC [Oceanibulbus indolifex HEL-45] gi|161382401|gb|EDQ06810.1| putative inner membrane protein translocase component YidC [Oceanibulbus indolifex HEL-45] Length = 623 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 206/610 (33%), Positives = 335/610 (54%), Gaps = 34/610 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM----NNERKNIQTVKQPNQVDNSYAAVL 57 E+N N +A ALS ++ W + P + + P ++ AA Sbjct: 3 EQNKNLILATALSFAVILVWFLLFPPPEADPALENSVEMSQAEDGTSVPASPADTAAAPG 62 Query: 58 IDD--------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 D+ R AL+ +PRV + + GSI+L G + DDL L Y + N+ +VT Sbjct: 63 TDNGEGAAPQGRRAALADAPRVAIATDKVSGSISLMGGRIDDLKLNDYQTTLDENAEVVT 122 Query: 110 LLSPSNTKNAYFAELDYVSTANNIE--LPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 LLSP + +AY+A + + + +P +T+W L G+ L +P+ L + N + Sbjct: 123 LLSPEGSSDAYYALHGWAAGSGLAPDAVPGVDTLWTLSEGETLGVDSPVTLSWDNGAGQI 182 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGD 226 F RTIS+D Y+F I +VTNN + +P G I +H P+ + F + EG + + + Sbjct: 183 FNRTISVDNEYMFDITQSVTNNGDAPVNLAPFGMIAQHGLPEDLKSFFILHEGAV-SMAN 241 Query: 227 KSLVEQKYSDIEKSSISNF---------HESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 L E + DI ++ +++ + W+G +D YW +V IP +F Y Sbjct: 242 GELSEIDWDDIAEADVNSTWGRPAVVTEGVTEGWVGFTDHYWQAVLIPGAGEAFEQALTY 301 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 Y+A ++ G+S+++++ FAGAKE+ T+ Y+ + +F IDWG Sbjct: 302 -DPRADTYRAFTRQPTRSVAAGESVSSSSKFFAGAKEWETLQDYQSA-GVAKFIDSIDWG 359 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WF+F+ KP+F L+ L+GN G+AI+ T+ +K L FPLA K YVS A MK +QP+++ Sbjct: 360 WFFFLTKPIFWLLHNLNQLIGNMGVAIIGLTLLIKALLFPLAYKSYVSMARMKELQPEME 419 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+++ Q +Q+ M++LYK + +NP AGC PIL+QIP+FF++YKVI +++E+RHAP Sbjct: 420 KLKKE-AGDDRQKMQQGMMELYKKNKVNPAAGCLPILMQIPIFFSLYKVIFVTIELRHAP 478 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPP 511 F+G +DL++ DPT+I L+G+LP+ P + +GI P+++ +SMF+Q K++P P Sbjct: 479 FFGPFQDLSSPDPTSIMNLWGLLPYAAPEPGSMLALVFIGILPLLLGISMFLQQKLNPAP 538 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D Q MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + L + Sbjct: 539 TDPTQQMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDLWGNIA 598 Query: 572 STFSKNYNSQ 581 F + Sbjct: 599 GGFKRTPKGD 608 >gi|83941456|ref|ZP_00953918.1| putative inner membrane protein translocase component YidC [Sulfitobacter sp. EE-36] gi|83847276|gb|EAP85151.1| putative inner membrane protein translocase component YidC [Sulfitobacter sp. EE-36] Length = 604 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 217/598 (36%), Positives = 338/598 (56%), Gaps = 28/598 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ---VDNSYAAV-- 56 ++N N A LS I++ W + P E + + Q + V +S A Sbjct: 3 DQNKNLIFATVLSFIVILGWFVLFPPPETETITDPAATQQVTDATSTEAVVPSSAGAADN 62 Query: 57 ---LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 D+ AL +PR+ ++ + GSI+L G + DDL+L+ Y+ + ++PIV+LLSP Sbjct: 63 VTDASDEATAALEEAPRIPVETARISGSISLLGGRVDDLHLKDYNTTIEDDAPIVSLLSP 122 Query: 114 SNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + T +AY+A + A ++P NT+W L G+ L+ TP+ L + N LF RT Sbjct: 123 AGTPDAYYALYGWAPGAGIAPEQVPGPNTLWTLSQGETLSVETPVTLTWDNDAGQLFSRT 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLV 230 IS+DE+Y+FKI V N S + + +P G I RH P A N F + EG +A + + L+ Sbjct: 183 ISIDENYMFKIEQKVENTSENSVSLAPYGLIARHGIPSDAQNFFILHEGLVA-MNNGELL 241 Query: 231 EQKYSDIEKSSISNFH-------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 E + DI + N +N W+G + Y+ + IP KYL Sbjct: 242 ETAWDDIPELDAVNGVPSKRIDGVTNGWIGFTGHYFMTNLIPDPAQPTRLSVKYLPRTE- 300 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 +Q + T+ G++ T T LFAGAKE+ + YE + +F IDWGWF+F+ Sbjct: 301 IFQTESVMPTQTVARGQTATVTTQLFAGAKEWEILRDYEAQ-GVYKFIDSIDWGWFFFLT 359 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F ++ + L+GN G+AI+ T+ +K L FPLA K YVS A MK +QP++++L++ Sbjct: 360 KPIFWVLHHLNLLIGNMGVAIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMEKLKKD- 418 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q LQ+ M++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G + Sbjct: 419 AGDDRQRLQQGMMELYKREKVNPAAGCLPILMQIPIFFSLYKVIFVTLELRHAPFFGPFQ 478 Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+A DPT+IF +G+LP+ P + +GI P+++ +SMF+Q K++P P D Q Sbjct: 479 DLSAPDPTSIFNFYGLLPWAAPEAGTVLALVFIGILPLLLGISMFLQQKLNPAPTDPTQQ 538 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + ++ ++ + Sbjct: 539 MIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDILGNIKGSMK 596 >gi|114569009|ref|YP_755689.1| protein translocase subunit YidC [Maricaulis maris MCS10] gi|122316769|sp|Q0ASI6|OXAA_MARMM RecName: Full=Inner membrane protein oxaA gi|114339471|gb|ABI64751.1| protein translocase subunit yidC [Maricaulis maris MCS10] Length = 592 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 223/590 (37%), Positives = 360/590 (61%), Gaps = 19/590 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-----YAAV 56 E N F+A+ L ++I+ +Q F + P EE E+ ++ ++ D AA Sbjct: 3 EDQRNLFIALGLILVILTGYQMFVMGPAEEERRAEQAAVEASQELADPDLPASALEPAAA 62 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 DR AL + RV + PS++GS++L GA+ DD+ LR + + ++P V LL+P + Sbjct: 63 TTVDRETALGGNQRVTIDAPSVLGSLSLTGARLDDVRLRRHTETIDDDTP-VALLNPIGS 121 Query: 117 KNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + ++A + S T+ +LP +T W L SG LTP TPI L + + + + FER IS+D Sbjct: 122 DHVFYARDGWTSATSGFTDLPGGSTEWTLASGSTLTPDTPITLTYDSPSGLHFERVISVD 181 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLGDKSLVEQK 233 ++YLF + DTVTNNS ++ S G ++RH +P+ T V EG +AV+ D ++V Sbjct: 182 DNYLFTLTDTVTNNSGQEVELSRYG-LVRHEGRPEDETRNMAVFEGALAVI-DGAMVRSS 239 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH-ARYQAKFSAN 292 + +E + + + W+GI+ +YW + +P ++ F ++F+ + G ++A + Sbjct: 240 FGKLEDGNQTEESGTGGWVGITQRYWMAAAVPDQDRPFTARFRTIERGEIDAFEASYVEQ 299 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 I + G+S+ +T +FAGAKE + + ++ I RF+M I+WGW +F+ +P L++ Sbjct: 300 AIAVPAGESLASTTRIFAGAKELGVLQQVQNEVGIERFDMAINWGWLWFLTRPFVWLLTM 359 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +G FG+AI+ T+ VK++ FPLA + Y S A MK +QPK+ E++E++ Q Q Sbjct: 360 LEGALGQFGLAILALTLMVKIVMFPLANRAYASMAKMKAVQPKMAEIKERYGAD-QQKQQ 418 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 +A+++LYKT INPLAGC PIL QIP+FFA+Y+ + ++EMRHAPF+GWI+DL+AADPTN Sbjct: 419 QALMELYKTEKINPLAGCLPILPQIPIFFALYQTLFNAIEMRHAPFFGWIRDLSAADPTN 478 Query: 473 IFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 I+ LFG++P+ + G + +G WPIIM L+M Q ++PPP D QA I ++P+V Sbjct: 479 IWNLFGLIPYDPTGIWLIGGVLGIGAWPIIMGLTMAAQQALNPPPPDPMQARIFAFLPIV 538 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 F F L+ F AGL+IYW+W+N +S++QQ +IM+ HG E + + + Sbjct: 539 FTFILAPFAAGLVIYWAWNNFLSVLQQYIIMRRHGNETQVDKLVARLLKR 588 >gi|121602508|ref|YP_989323.1| putative inner membrane protein translocase component YidC [Bartonella bacilliformis KC583] gi|120614685|gb|ABM45286.1| inner membrane protein, 60Kd [Bartonella bacilliformis KC583] Length = 612 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 266/611 (43%), Positives = 378/611 (61%), Gaps = 32/611 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N N+F+AI LS+II AW Y+ P+ E + N + Q + N +Y A ++ Sbjct: 1 MEYNRNFFIAIGLSLIIFVAWHFLYIVPQHENLKNAQTIEQQALKQNPASPTYDADFSNN 60 Query: 61 ------------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 R L+ + R+ +K L GSINL GAQFDDL L+ YHL V Sbjct: 61 AQTNQSRLTADRSMTPEIRRAELAKTDRITIKTDELEGSINLVGAQFDDLFLKKYHLTVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLIS-GKILTPTTPIKLVF 160 SP ++LL+P+ K +Y AE + S++ LP SNT W + S ILTP+TP+ LV+ Sbjct: 121 KTSPQISLLNPNGFKTSYLAEFGFTSSSLPEKALPQSNTQWQIESENTILTPSTPVTLVY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT-ATNTFGVQEG 219 N +F RTIS+D+HY+F I D++ N S + + S R+ R P A T+ + EG Sbjct: 181 NNGQGQIFRRTISIDDHYMFTIEDSINNESDNPVHLSSYARVARAAPPEHAQATYLLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEK---------SSISNFHESNSWLGISDKYWASVFIPSKETS 270 I + G SL + Y + + S++ + W+GI+DKYWA IPS+ Sbjct: 241 MIGIAG-NSLKTETYEALSELTLNPEDGQKSLTFQKVTGGWIGITDKYWAVAVIPSQNQE 299 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + S+F Y + YQ+ + ++I P ++ T N+LFAGAK I+ Y+ L I +F Sbjct: 300 YTSRFVYFDRLNTHYQSDLQSALLSIAPRETKTIINYLFAGAKRVEIINQYQNQLQIKKF 359 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +LIDWGWF FI KPMF L+ Y GNFGIAI+LTTV +K L FPLA K Y+S A MK Sbjct: 360 GLLIDWGWFDFITKPMFSLIHILYEQTGNFGIAILLTTVLLKTLLFPLANKSYISMARMK 419 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 IQP + E++EK+ + + Q A+IQLYKT INPLAGC P+L+Q P+FFA+YKV+ I+ Sbjct: 420 IIQPMMQEIKEKYAEDRVK-QQHAIIQLYKTQKINPLAGCLPMLIQFPIFFALYKVLYIT 478 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 LEMRHAPF+GWI+DLAA DPT+IF LFG LP+ +P F +G WP++M ++MF+QM+M+PP Sbjct: 479 LEMRHAPFFGWIQDLAAPDPTSIFNLFGFLPYAVPAFFVIGAWPLVMGITMFLQMQMNPP 538 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QA + W+P++F F L+SFPAGL+IYW+W+N +SI+QQ++IMK G +I L + + Sbjct: 539 PVDPIQATLFAWLPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSIIMKRQGVKIELFNNI 598 Query: 571 RSTFSKNYNSQ 581 ++ + K + Sbjct: 599 KTIWQKAPKKE 609 >gi|310816968|ref|YP_003964932.1| inner membrane protein oxaA, putative [Ketogulonicigenium vulgare Y25] gi|308755703|gb|ADO43632.1| inner membrane protein oxaA, putative [Ketogulonicigenium vulgare Y25] Length = 612 Score = 564 bits (1453), Expect = e-158, Method: Composition-based stats. Identities = 210/607 (34%), Positives = 323/607 (53%), Gaps = 33/607 (5%) Query: 1 ME-RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP--------NQVDN 51 ME +N N +A LS++++ W + E N + QT Sbjct: 1 MENQNKNLILATVLSLVVIVVWFFLF---PPEATNPTLTDEQTTSVATDGTLPVGGAGST 57 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + + I D + + + RV ++ P L GSI+L G + DDL L Y + +S V LL Sbjct: 58 AGSLEAITDADASPATAARVGIETPRLSGSISLLGGRIDDLFLSDYQETIDEDSATVRLL 117 Query: 112 SPSNTKNAYFAELDYVSTAN--NIELPNSNTVWNLIS-GKILTPTTPIKLVFKNANNILF 168 P + AY+A + + +P +T+W+L S LTP TP+ LV+ N +F Sbjct: 118 RPVGERGAYYASFGWAAAQGIAPEAVPGPDTLWSLESANDTLTPETPVTLVWDNGAGQVF 177 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDK 227 T ++D Y+F + +V N + P G + RH P+ F + EG I + D Sbjct: 178 RTTFAIDADYMFTVDQSVQNMGDAAVEMRPYGLVRRHGMPEGLREFFILNEG-IVRMADG 236 Query: 228 SLVEQKYSDIEKSSISNF--------HESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 L E KYS + + + + + W+G +D YW + IP + F S KYL Sbjct: 237 RLEEMKYSKMSDMNDAELGVPAEVAEAQESGWIGFTDHYWMTTLIPEQGQPFRSVQKYL- 295 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 +Q + + G +T + LFAGAKE+ TI Y+ + +PRF IDWGWF Sbjct: 296 PSRDIFQVEAVMPRQDVAAGAEVTISTRLFAGAKEWATIREYQNEDGVPRFIDSIDWGWF 355 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YF+ KP+F ++ + +GN G +I+ T+ +K + PLA K YVS A MK +QP++++L Sbjct: 356 YFLTKPIFSVLHWLNQHIGNMGWSIIALTLILKAIVLPLAYKSYVSMARMKELQPELEKL 415 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 + + K Q LQ M++LYK + +NP +GC P+++QIP+FF++YKVI +++E+RHAP+ Sbjct: 416 QARHKDD-RQALQTGMMELYKKNKVNPASGCLPMIVQIPIFFSLYKVIFVTIELRHAPWI 474 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 GW++DL+A DPT+I LFG+LP+ P +G+ PI + LSM++Q K++P P D Sbjct: 475 GWLQDLSAPDPTSILNLFGLLPWGTPEIDSFFFIFSLGVLPIFLGLSMWLQQKLNPLPPD 534 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 Q MI WMP VF+F L SF +GL++YW +NVI+ VQQ IM HG L + Sbjct: 535 PTQRMIFAWMPWVFMFMLGSFSSGLVLYWIANNVITFVQQYSIMTYHGHRPDLFGNILGG 594 Query: 574 FSKNYNS 580 F + Sbjct: 595 FKRKPKE 601 >gi|126728217|ref|ZP_01744033.1| putative inner membrane protein translocase component YidC [Sagittula stellata E-37] gi|126711182|gb|EBA10232.1| putative inner membrane protein translocase component YidC [Sagittula stellata E-37] Length = 600 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 216/599 (36%), Positives = 345/599 (57%), Gaps = 25/599 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYP-RIEEMNNERKNIQTVKQ-------PNQVDNSY 53 E+N N F+A ALS +++ W + +E+ N + QT P + Sbjct: 3 EQNKNLFLATALSFVVILVWFILFPPQDPVEDPNAPAEVSQTADPATGVAAVPEAAPGTE 62 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 AA + A+ +PR+ L L GSI+L G + DDL L+ Y + + S+ IV + Sbjct: 63 AAAPAGEPVDAVDDAPRLPLDTARLEGSISLTGGRLDDLRLKDYTVSLDSDE-IVQVFHR 121 Query: 114 SNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + +AY+ + E+P +NT W++ +G+ LT TP+ L + + + ++F RT Sbjct: 122 VGSSDAYYTLYGWAPGGGLSMDEVPGANTPWSVETGETLTTETPVTLRWDSPSGLIFRRT 181 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLV 230 I++DE+Y+F + T+ N S + +P G + RH PQ F + EG I+++ D L Sbjct: 182 IAVDENYMFTVTQTIENASDASVSLAPYGVLARHGEPQNVKKFFILHEGGISMI-DGELT 240 Query: 231 EQKYSDIEKSSI--SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 E Y D + + E+ W G +D YW S IP++ + S F S+ YQ Sbjct: 241 ETDYDDFQTAGQHQDVTMETAGWTGFTDHYWMSTLIPTQPGTKVSTFHNQSN--DIYQTT 298 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 +T+ PG++ ++ LFAGAKE+ TI Y+K+ + RF IDWGWF+F+ KP+F Sbjct: 299 ARMPTMTVAPGETQQVSSKLFAGAKEWETIREYQKN-GVDRFIDSIDWGWFFFLTKPIFA 357 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ + + ++GN GIAI+ T+ +K+L FPLA K Y S A MK +QP++++L+E+ Sbjct: 358 VLHWLHGVIGNMGIAIIGLTILLKILLFPLAYKSYASMAKMKELQPEMEKLKER-AGDDR 416 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + LQK M+ LYK +NP AGC PILLQIP+FF++YKVI ++LE+RHA F+G +DL+A Sbjct: 417 EKLQKEMMALYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHANFFGPFRDLSAP 476 Query: 469 DPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DPT+++ LFG+LP+ P + +GI PI++ +SM++Q K++P PAD Q MI W Sbjct: 477 DPTSLYNLFGLLPWAAPEAGSILALVFIGILPILLGISMWLQQKLNPAPADPTQQMIFAW 536 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 MP VF+F L F +GL++YW +N I+ QQ +IM+ HG ++ ++ +F + + Sbjct: 537 MPWVFMFMLGGFASGLVVYWITNNTITFTQQYLIMRSHGYHPNVLGNIKGSFKRGKKDE 595 >gi|254450534|ref|ZP_05063971.1| 60 kD inner-membrane protein [Octadecabacter antarcticus 238] gi|198264940|gb|EDY89210.1| 60 kD inner-membrane protein [Octadecabacter antarcticus 238] Length = 593 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 206/593 (34%), Positives = 328/593 (55%), Gaps = 25/593 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT--------VKQPNQVDNSY 53 ++N N +A ALS I++ W + P + E + T + P QV Sbjct: 3 DQNKNIILATALSFIVILTWFVLFPPPEVAEQAPTTEITTTDGTTLGVDAQIPEQVGE-V 61 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A + ++ +PR+ + + SL GS++L G + DDL+L+GY + ++ +V LLSP Sbjct: 62 AVLAPLSAEDVIADAPRLVIDSESLTGSLSLTGGRIDDLSLKGYRETLKPDADLVRLLSP 121 Query: 114 SNTKNAYFAELDYVS--TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 T + Y+A +V+ A ++P ++T W + SG+ L+P + + LV+ N + F +T Sbjct: 122 IGTDSPYYALHGWVAAVGATADQVPGASTQWQIESGETLSPGSDVTLVWGNGAGLTFRKT 181 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 ++DE +LF + TV N + +I P G + RH F EG + + D S+ E Sbjct: 182 FAVDEEFLFTVTQTVENTTGAEIALRPYGLVARHGEPDQIGFFIQHEGVVR-MSDGSMEE 240 Query: 232 QKYSDIEKSSISNFH---ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 Y D+ + N W+G SD+YW + IP+ F S K+ +D YQ + Sbjct: 241 INYDDMPDLTTEESRIEVTENGWIGFSDQYWMTALIPTPGRDFRSTAKFAND---IYQIE 297 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 IT+ PG + + FAGA+E+ I Y+ DL I RF IDWGWF+F+ KP+F Sbjct: 298 TVYPMITVAPGATASADTQFFAGAQEWEVIRSYQNDLGIDRFLDSIDWGWFFFLTKPIFA 357 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ + L+GN G +I+ T +K L PLA K YVS A M+ +QP++ +L+E Sbjct: 358 MLHWLNGLIGNMGWSIICLTFVIKALLLPLAYKSYVSMAKMRELQPEMAKLKEA-AGDDR 416 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + LQK M+ LYK + +NP +GC PIL+QIP+FF++YKVI +++E+RHAP+ GW+ DL+A Sbjct: 417 EKLQKGMMSLYKENKVNPASGCLPILMQIPIFFSLYKVIFVTIELRHAPWIGWVNDLSAP 476 Query: 469 DPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 D + ++ LFG+LP+ P +G+ PI++ +SM++Q K++P P D Q MI W Sbjct: 477 DTSTLYNLFGLLPWGAPEPDSILALAFIGVMPIVLGISMWLQQKLNPAPTDATQKMIFAW 536 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 MP VF+F L F +GL++YW +N I+ +QQ IM+ G + L + Sbjct: 537 MPWVFMFMLGGFASGLVLYWIANNSITFMQQYAIMRSQGFKPDLFGNITGRKK 589 >gi|157803235|ref|YP_001491784.1| putative inner membrane protein translocase component YidC [Rickettsia canadensis str. McKiel] gi|166977408|sp|A8EXB6|OXAA_RICCK RecName: Full=Inner membrane protein oxaA gi|157784498|gb|ABV72999.1| putative inner membrane protein translocase component YidC [Rickettsia canadensis str. McKiel] Length = 560 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 241/563 (42%), Positives = 349/563 (61%), Gaps = 6/563 (1%) Query: 1 MERN-WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M N N AI LS+ I++ WQ F V P ++ + + Q + D Sbjct: 1 MNNNIMNLIAAIVLSLSIIFGWQYFVVKPEHKKQQQQIAMQKAENLKKQKLKALIKPASD 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 Q + R+++++ SL GSI+LKG +FDDL L+ Y D+S NS V L SP+NT+NA Sbjct: 61 LVVQEANQVQRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSTEVRLFSPANTENA 120 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 YFAE+ VS ++++LPN++T+WN G+IL+P P+ L + N + + F TI+LDE+YL Sbjct: 121 YFAEIGLVSNLSSVKLPNNDTIWNS-DGEILSPEKPVNLFWVNEDGVKFLVTITLDENYL 179 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F + T+ NNS ++ G I R + +G I + + L E Y DI+ Sbjct: 180 FTVEQTIVNNSDKELPVQSYGLINRKYIAVEKAVNILHQGPIGCINEN-LKEYSYDDIKD 238 Query: 240 SSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITIL 297 F W+G++DKYW S IP K +++ S F Y L+ G RYQ F + I Sbjct: 239 KKSEKFVASKVDWIGMTDKYWLSSLIPDKSSNYSSNFNYALTQGVERYQVDFISPVQIIK 298 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G++ + T+ +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY V Sbjct: 299 SGENFSITSRIFAGAKKVDLLDKYEKQYGIKLFDRAIDFGWFYIITKPVFYAMNFFYGYV 358 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GNFGI+I++ TV +KLL F LA K Y S MKN+QP+ID ++ + + L + ++ Sbjct: 359 GNFGISILIVTVIIKLLMFTLANKSYCSMKKMKNLQPEIDRIKNLYGDDKAR-LNQEIMA 417 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LF Sbjct: 418 LYKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLF 477 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 G LPF P F+ +G WPI+M+++MF+Q +MSP PAD QA ++ +MP++F+ SSFP G Sbjct: 478 GFLPFSPPSFLMIGAWPILMAITMFLQQRMSPEPADPVQAQVMKFMPLIFLVMFSSFPVG 537 Query: 538 LIIYWSWSNVISIVQQAVIMKMH 560 L+IYWSW+N++SI+QQ I K + Sbjct: 538 LLIYWSWNNILSIIQQYYINKFN 560 >gi|288957364|ref|YP_003447705.1| preprotein translocase YidC subunit [Azospirillum sp. B510] gi|288909672|dbj|BAI71161.1| preprotein translocase YidC subunit [Azospirillum sp. B510] Length = 577 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 217/579 (37%), Positives = 331/579 (57%), Gaps = 19/579 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK----------NIQTVKQPNQVD 50 M N +AIALS+ I+ +Q FY PR+E+ + P Q+ Sbjct: 1 MTDQRNLIIAIALSIAILLGFQYFYEKPRVEQQKQLAAQQAAQTEQSVPVPAPGVPAQLP 60 Query: 51 NSYAAVLIDDR-----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + + + A+ ++ RV++ P+L GS+NL G + DDL L YH S Sbjct: 61 SGMSTAEVAKERPVLLAEQMAAGTRVKIDTPALHGSVNLVGGRIDDLTLAQYHETPDPKS 120 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 P + LL+P+ T AY+AE +V + P + T W G LTP P+ L + N Sbjct: 121 PEIVLLAPAGTPAAYYAEFGWVPQGAGVATPTATTRWT-ADGAALTPEKPLTLSWDNGQG 179 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 ++FER I++D ++F + TV N + P + R + + + EG + V Sbjct: 180 LVFERKIAVDPDFMFTVTQTVRNTGAAPVTLLPYSLVSRSGTPHTSGYYILHEGPLGVFN 239 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH-AR 284 SL E+KY D+ K+ + W+GI+DKYW +P ++F Y + R Sbjct: 240 -GSLTEEKYDDVRKAGSIAKDTTGGWIGITDKYWLVSLVPDPSEKVTARFLYNQVANADR 298 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQ +T+ PG S T LFAGAK+ + Y + L I F++ ID+GWFYF+ K Sbjct: 299 YQTDTMGAPVTVAPGASAENTGRLFAGAKQVKLLDGYSEKLNIKNFDLAIDFGWFYFLTK 358 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P F + + ++GNFGIAI++ TV VK +FFPLA K Y + + MK +QPK+ ELREKF Sbjct: 359 PFFYALDFLGRIIGNFGIAILVLTVCVKAVFFPLANKSYQAMSKMKALQPKMQELREKFS 418 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 + + + ++ LYK ++P++GC PI++QIPVFF++YKV+ +++EMRHAPF+GWI D Sbjct: 419 DDQAR-MNQELMALYKREKVSPVSGCLPIVIQIPVFFSLYKVLFVTIEMRHAPFFGWIHD 477 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L++ DPT IF LFG++P+ P +H+G+WP+IM ++M+ Q KM+P P D QA + ++P Sbjct: 478 LSSPDPTTIFNLFGLIPWDPPAMLHLGLWPLIMGVTMWFQQKMNPAPPDPVQAKVFQFLP 537 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +VF F L+ FPAGL+IYW+W+N +S++QQ IMK G + Sbjct: 538 IVFTFMLAGFPAGLVIYWAWNNTLSVLQQWTIMKRMGVK 576 >gi|119383628|ref|YP_914684.1| putative inner membrane protein translocase component YidC [Paracoccus denitrificans PD1222] gi|166975878|sp|A1B0E4|OXAA_PARDP RecName: Full=Inner membrane protein oxaA gi|119373395|gb|ABL68988.1| protein translocase subunit yidC [Paracoccus denitrificans PD1222] Length = 635 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 218/620 (35%), Positives = 331/620 (53%), Gaps = 50/620 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 + N N +A+ LS +++ W F+ P + + Q QP + + Sbjct: 3 DNNRNLILAMVLSALVMLVWSIFFAPEPVPPAQDTPAASTQGTAQPEAGGPATPGAVPQG 62 Query: 61 RAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 A L + RV +++ SL G+I+L G + DDL L GY + + SP V L Sbjct: 63 AAPELEAAAASSDPSANAGRVAIESSSLAGTISLAGGRIDDLELTGYRETLDTRSPFVRL 122 Query: 111 LSPSNT--------------------KNAYFAELDYVSTANNIE--LPNSNTVWNLISGK 148 LSP+ + Y+A ++ A +P TVW + SG Sbjct: 123 LSPTAQTTVQAEGSPVAPGGGAELAVQKPYYAVYGWMPAAGTDPALVPGPATVWEVESGA 182 Query: 149 ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208 L P P+ L + N +F RT LD+ +LF + T+ N +P G + RH Sbjct: 183 KLGPGQPVTLRWDNGAGQIFRRTYELDDKFLFTVTQTLENTGTAPFSAAPYGILARHGKP 242 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES--------NSWLGISDKYWA 260 N F + EG + + D L+E+KY D+ K N W+G +DKYW Sbjct: 243 DTQNFFVLHEGAVG-MTDGKLLEKKYKDMTKLDPLPGEGPAELVEVQENGWIGFTDKYWM 301 Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 + P+ SF + KY + G YQ + T+ PG + T++++LFAGAK + I+ Sbjct: 302 TTLAPAPGQSFTAVAKY-APGADIYQTEARMPVQTVAPGATGTSSSYLFAGAKVWEVING 360 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 Y+ + I RF IDWGWFYF+ KP+F L+ + + ++GN G AI+ T +KLL FPLA+ Sbjct: 361 YQTNPGIDRFVDSIDWGWFYFLTKPIFRLLHWLHGMIGNMGWAIIALTFVLKLLVFPLAR 420 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 K Y+S A MK +QP+++ ++E+ QK +++LYK +NP AGC P+LLQIP+F Sbjct: 421 KSYISMAKMKELQPQMEAIKER-TGDDRMKFQKEVMELYKREKVNPAAGCLPVLLQIPIF 479 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG---FMHVGIWP--- 494 FA+YKVI +++E+RHAP+ GWI+DLAA DP++++ LFG+LP+ PG F+H P Sbjct: 480 FALYKVIFVTIELRHAPWIGWIRDLAAPDPSSLWNLFGLLPWAAPGQGSFLHSFTLPVLA 539 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 I++ +SM++Q K++P P D Q MI WMP VF+F L F +GL++YW +N I+I+QQ Sbjct: 540 ILLGVSMWMQQKLNPAPTDPAQKMIFAWMPWVFMFMLGGFASGLVLYWITNNTITIIQQY 599 Query: 555 VIMKMHGAEIGLIDRLRSTF 574 IM MHG +RS+ Sbjct: 600 TIMSMHGHRPDFFGNIRSSL 619 >gi|15603927|ref|NP_220442.1| putative inner membrane protein translocase component YidC [Rickettsia prowazekii str. Madrid E] gi|38503265|sp|Q9ZE97|OXAA_RICPR RecName: Full=Inner membrane protein oxaA gi|3860618|emb|CAA14519.1| 60 KD INNER-MEMBRANE PROTEIN (yidC) [Rickettsia prowazekii] gi|292571645|gb|ADE29560.1| Preprotein translocase subunit YidC [Rickettsia prowazekii Rp22] Length = 560 Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats. Identities = 247/563 (43%), Positives = 353/563 (62%), Gaps = 6/563 (1%) Query: 1 MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M N N A+ LS+ I++ WQ F+V P ++ ++ Q + A D Sbjct: 1 MNNNIINLIAAVVLSLSIIFGWQYFFVKPEQKKQQQRIAMHKSENLNKQKLKALAEPASD 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 Q S R+++++ SL GSI LKG +FDDL L+ Y D+S NSP V L SP+NT+NA Sbjct: 61 IAVQEASQVQRIKIESESLTGSIALKGLRFDDLILKKYKQDLSQNSPAVRLFSPANTENA 120 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 YFAE+ VS N+++LPNSNTVWN S ++L+P P+ L + N + I F TI++D++YL Sbjct: 121 YFAEIGLVSNLNSVKLPNSNTVWNSDS-EVLSPEKPVNLFWINEDGIKFLVTITVDKNYL 179 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F I T+ NNS ++ G I R + +G I + D++L E Y DI+ Sbjct: 180 FTIEQTIINNSDKELPVQSYGLINRKYISLEKAVNILHQGPIGCI-DENLKEYSYDDIKD 238 Query: 240 SSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITIL 297 + F W+GI+DKYW S IP K + + S F Y L G RYQ F + I Sbjct: 239 KKSTKFALSKVDWIGITDKYWLSSLIPDKSSRYSSNFNYALKQGTERYQVDFISPVQVIK 298 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PG++++ + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY V Sbjct: 299 PGENLSIKSRIFAGAKKVDLLDEYEKSYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYV 358 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GNFGI+I++ TV +KLL F LA K Y S MKN+QP+ID ++ + + L + ++ Sbjct: 359 GNFGISILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYNNDKAR-LNQEIMA 417 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL++ DPT IF LF Sbjct: 418 LYKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFFGWIKDLSSPDPTTIFNLF 477 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 G+LPF P F+ +G WPI+M+++MF+ KMSP AD QA ++ +MP++F+F SSFP G Sbjct: 478 GLLPFAPPSFLMIGAWPILMAITMFLHQKMSPELADPIQAQVMKFMPLIFLFMFSSFPVG 537 Query: 538 LIIYWSWSNVISIVQQAVIMKMH 560 L+IYWSW+N++SI+QQ I K + Sbjct: 538 LLIYWSWNNILSIIQQYYINKFN 560 >gi|319406774|emb|CBI80407.1| translocase precursor subunit [Bartonella sp. 1-1C] Length = 612 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 259/611 (42%), Positives = 372/611 (60%), Gaps = 32/611 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT------------------ 42 ME N N+F+AI LS ++ AW Y+ P+ ++ + Q Sbjct: 1 MEYNRNFFIAIGLSFVVFVAWHFLYIVPQQAKLQESKITTQKLSNHNAALPTNDPYFSHN 60 Query: 43 VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + V + + + R L+ + RV +K L GSINL G +FDDL L+ Y L V Sbjct: 61 ASTDDTVPVANRPITPEVRKAELAKTNRVLIKTNELEGSINLVGGKFDDLLLKKYRLKVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKI-LTPTTPIKLVF 160 SP + LL+P+ YFAE + S++ + LP SNT W L LTP+TPI LV+ Sbjct: 121 KKSPEIILLNPNGLPTTYFAEFGFTSSSLPAQALPQSNTKWQLEGDNTTLTPSTPITLVY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 N +F RT S+DEHY+F I D+++N S + S RI R P TN T+ + EG Sbjct: 181 NNGQGQIFHRTFSVDEHYMFTIKDSISNESSSPVYLSSYARIARAAPPEDTNATYLLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEK---------SSISNFHESNSWLGISDKYWASVFIPSKETS 270 I + GD SL +KY+ + + S+ + + W+GI+DKYWA IP ++T Sbjct: 241 MIGIAGD-SLKTEKYTALAELSPNPQNGQKSVIFPNITRGWIGITDKYWAVAVIPPQDTE 299 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + S+F Y + YQ+ + +T+ P ++ T TN LFAGAK I+HY+ L I +F Sbjct: 300 YTSRFVYFDRLNTHYQSDLQSALLTVPPHETKTITNRLFAGAKRVEIINHYQNQLKINKF 359 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +LIDWGWF FI KPMF L+ Y NFG+AI+L TV +K+L FPLA K Y S A +K Sbjct: 360 SLLIDWGWFDFITKPMFALIDILYKYTENFGVAILLITVLLKILLFPLAHKSYKSIARLK 419 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 IQP + E++EK+ + Q+A+I+LYKT INP AGCWPIL+Q P+FFA+YKV+ I+ Sbjct: 420 VIQPMMLEIKEKYADDRNK-QQQAIIELYKTKKINPFAGCWPILIQFPIFFALYKVLYIT 478 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P Sbjct: 479 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYAVPTFLILGAWPLIMGITMFLQMQMNPL 538 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D Q ++ WMP++F L+SFPAGL+IYW+W+N++SI+QQ++IMK G +I D L Sbjct: 539 PQDPTQVVVFRWMPIIFTIMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKIEFFDNL 598 Query: 571 RSTFSKNYNSQ 581 ++ K+ + Sbjct: 599 KAIVQKDSKKE 609 >gi|83950483|ref|ZP_00959216.1| inner membrane protein YidC, putative [Roseovarius nubinhibens ISM] gi|83838382|gb|EAP77678.1| inner membrane protein YidC, putative [Roseovarius nubinhibens ISM] Length = 599 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 206/597 (34%), Positives = 327/597 (54%), Gaps = 20/597 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIE------EMNNERKNIQTVKQPNQVDNSYAA 55 ++N N +A LS++++ W + + T P + Sbjct: 3 DQNKNLILASILSLLVIIIWTVLFPAAETDLPADTVTTTASAPAGDTALTPGSAGGEVST 62 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + RV ++ PS+ GSI+L+G + D+L L Y + + IVTLL+P+ Sbjct: 63 ETTAPAEPLPESAARVAVETPSVTGSISLRGGRLDELALNNYRESLDPGAEIVTLLNPTG 122 Query: 116 TKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + + Y+A + N+ +P +NT+W++ SG+ LTP +P+ L+++N + F R IS Sbjct: 123 SASPYYALFGWAPGTGLNSDSVPGANTLWSVESGETLTPESPVTLLWENGQGLTFRREIS 182 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVEQ 232 +D Y+F I TV N +P G I RH P N F + EG + + D L E Sbjct: 183 VDAKYMFTIRQTVENTGDAAPVLAPYGIIARHGEPADLKNFFILHEGAVQ-MADGELNEI 241 Query: 233 KYSDIEKSSISNF--HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 Y D E + +N W G +D YW + IP ET F + YQ Sbjct: 242 DYDDFEGAGNHTPLKVATNGWTGFTDHYWMTTLIPRGETGFDLST-FQDPRRNIYQTTVK 300 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 IT+ PG++ T LFAGAKE+ TI +Y+ + +F IDWGWF+F+ KP+F L+ Sbjct: 301 QPAITLEPGQTAEATTQLFAGAKEWETIRNYQNKGGVDKFLDSIDWGWFFFLTKPIFALL 360 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + +GN G +I+ T+ +KL+ PLA K YVS A MK +QP++++++E+ Q Sbjct: 361 HWLNQQIGNMGWSIIALTLIIKLVLLPLAYKSYVSMAKMKELQPQMEKIKER-AGDDRQA 419 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 LQK M+ LYK +NP +GC PILLQIP+FF++YKVI ++LE+RHAP+ GWI+DL+A DP Sbjct: 420 LQKEMMALYKKEKVNPASGCLPILLQIPIFFSLYKVIFVTLELRHAPWIGWIRDLSAPDP 479 Query: 471 TNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 ++++ L+G+LP+ P + +GI P+++ +SM++Q K++P P D Q M+ WMP Sbjct: 480 SSLYNLWGLLPWNAPEPGSLLALIFIGILPLLLGISMWLQQKLNPAPTDPTQKMVFAWMP 539 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +F+F L SF +GL++YW +N I+ QQ IM+ G + + ++S F + + Sbjct: 540 WIFMFMLGSFASGLVVYWIANNTITFTQQYAIMRSQGYKPDVFGNIKSGFKRTRKTD 596 >gi|254460224|ref|ZP_05073640.1| 60 kDa inner membrane insertion protein [Rhodobacterales bacterium HTCC2083] gi|206676813|gb|EDZ41300.1| 60 kDa inner membrane insertion protein [Rhodobacteraceae bacterium HTCC2083] Length = 601 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 210/604 (34%), Positives = 330/604 (54%), Gaps = 29/604 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRI------EEMNNERKNIQTVKQPNQVDNSYAA 55 ++N N +A ALS I++ W + P ++ E + ++ Sbjct: 3 DQNKNLILATALSFIVILVWFVLFPPPEPTPADPNAVISAEGDAVLPSVSAGDDADAGVN 62 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + +PR+ ++ L GSI+L G + D L L+ Y + + ++PIV LLSP Sbjct: 63 TAAAQAEEPTQDAPRIAIETGRLKGSISLLGGRIDQLALKDYRVSLDDDAPIVDLLSPVG 122 Query: 116 TKNAYFAELDYVSTANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 K+ Y+A + A ++P NT+W+ S L+ P+ L + N N + F RTIS Sbjct: 123 EKSPYYALYGWAPGAGLAFEQVPGPNTIWSAQSSGNLSVDAPVTLTWDNGNGLQFTRTIS 182 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVEQ 232 +DE+++F + +V N + +P G + RH PQ N F + EG +A + D L E Sbjct: 183 VDENFMFSVAQSVENTGAGTVSLAPYGILARHGEPQNLKNFFILHEGVVA-MSDGELTEI 241 Query: 233 KYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 YSD+ ++ + W+G +D+YW + IP+ +F S KY D Sbjct: 242 DYSDMPDFDVNPNEGARAEVTQVAEQGWVGFTDQYWMTTLIPAPG-AFKSTAKY-DDRRD 299 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 YQ + + PG + + T LFAGAKE+ TI YE + F IDWGWF+F+ Sbjct: 300 IYQTEAVLPTQRLAPGATASATTQLFAGAKEWATIRDYETA-GVEGFIDSIDWGWFFFLT 358 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F ++ Y ++GN G AI+ T +KL+ FPLA K VS A MK +QP++++++E Sbjct: 359 KPIFAVLHYLNAMIGNMGWAIIGLTFLIKLILFPLAYKSNVSMAKMKALQPQMEKIKES- 417 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q LQ+ M+ +YK +NP +GC PIL+QIP+FF++YKVI ++LE+RHAP+ GWIK Sbjct: 418 AGDDKQKLQQDMMAMYKKEKVNPASGCLPILVQIPIFFSLYKVIFVTLELRHAPWIGWIK 477 Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+A DP++I LFG+L F P +GI PI++ +SM++Q K++P P D QA Sbjct: 478 DLSAPDPSSILNLFGLLSFVPPEPGSILAIFSLGILPILLGISMWMQQKLNPAPTDPTQA 537 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MI WMP VF+F L +F +GL++YW +N I+ QQ +IM+ G + + +++ F + Sbjct: 538 MIFAWMPWVFMFMLGTFASGLVVYWIANNTITFTQQYLIMRSQGVKPDVFGNIKAGFKRK 597 Query: 578 YNSQ 581 + Sbjct: 598 PKEE 601 >gi|329888537|ref|ZP_08267135.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain-containing protein [Brevundimonas diminuta ATCC 11568] gi|328847093|gb|EGF96655.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain-containing protein [Brevundimonas diminuta ATCC 11568] Length = 600 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 229/598 (38%), Positives = 341/598 (57%), Gaps = 25/598 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------SY 53 E + N + + +I+ + + P+ E + ++ + + Sbjct: 4 ENSRNTIIFFVCAALIMGVYYFMVMRPQAESRRQAQIVAAEQQKAREASADAGLTPSGAA 63 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 V I DRAQAL RV ++ P+L GS++L+GA+ DDL L Y + NSP V L P Sbjct: 64 PGVFIKDRAQALGTVARVPIQTPTLKGSLSLQGARIDDLYLTRYRETLDKNSPPVELFRP 123 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 ++AYFA+ + +P NTVW L G LTPTTP++L + N + + F R +S Sbjct: 124 QGMEHAYFAQFGWSGPNVAGGVPGPNTVWRLTKGSTLTPTTPVELTWDNGSGLRFTRVVS 183 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDK---SL 229 +D+ Y+F + DTV N I +P GR+ R P + EG I GD S Sbjct: 184 IDDQYMFTVKDTVANLGTQAIAIAPYGRVERQGVPVDLGKQMILHEGAIGTFGDGGGYST 243 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAK 288 + KY D K + WLGI+DKYW + IP+++ + +F G ++A Sbjct: 244 EQVKYKDWAKKPRIENQSTGGWLGITDKYWLAALIPTQDETIEGRFSVRDAQGMNIHEAA 303 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 TI PG+ I T LFAGAK + YE+ L +PRF IDWG F+F+ +P+F Sbjct: 304 MLGATHTIQPGRQIEETQRLFAGAKRAEVLKAYEQSLNLPRFVYAIDWGMFWFLTRPIFT 363 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ +FY ++GNFG+AI+ TV VKL+ FPLA K Y S + M+N+QPK++E+++K S P Sbjct: 364 VVEFFYGVLGNFGLAILALTVVVKLILFPLANKSYESLSKMRNLQPKMEEIKKKH-GSEP 422 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q Q+ M+ LY+ INPLAGC P+++QIPVF+A+YKV+ +++EMRHAPF+GWI+DL+A Sbjct: 423 QKQQQEMMALYQREKINPLAGCLPMVVQIPVFYALYKVLFVTIEMRHAPFFGWIRDLSAR 482 Query: 469 DPTNIFTLFGILPF----------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 DP+ I+ LFG +P+ L G +H+G+ P++ +M++QM M+PP D Q Sbjct: 483 DPSTIWNLFGAIPWDPATLPILGGILNGPLHLGVLPLVYGFTMWLQMAMNPPAQDPMQRQ 542 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 I MP+VF F ++ F AGL+IYW+W+NV+SI+QQ VIM AE + D + F K Sbjct: 543 IFALMPIVFTFIMAPFAAGLLIYWAWNNVLSIIQQYVIMHRFKAENPI-DAFLARFKK 599 >gi|254488170|ref|ZP_05101375.1| 60 kD inner-membrane protein [Roseobacter sp. GAI101] gi|214045039|gb|EEB85677.1| 60 kD inner-membrane protein [Roseobacter sp. GAI101] Length = 616 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 211/595 (35%), Positives = 331/595 (55%), Gaps = 30/595 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRI-------EEMNNERKNIQTVKQPNQVDNSYA 54 ++N N +A LS I++ W + P E ++ T + Sbjct: 3 DQNKNLIIATVLSFIVILGWFLLFPPPEPNTPLDGTEISATAPTDVTTPDAAVPAGTALP 62 Query: 55 AVLID---DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A D RA +L +PRV ++ L GSI+L G + DDL L+ Y + ++PIVTLL Sbjct: 63 ATTADPEETRADSLEQAPRVPVETSRLTGSISLLGGRIDDLRLKDYRTTIEDDAPIVTLL 122 Query: 112 SPSNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 SP+ T +AY+A + + A ++P NT+W+L SG L+ +P+ + + N +F Sbjct: 123 SPAGTDDAYYALYGWAAGAGIAPEQVPGPNTLWSLASGDTLSVGSPVTMTWDNGAGQVFS 182 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKS 228 R IS+DE+++F++ +V N S + +P G I RH P A N F + EG +A + + Sbjct: 183 RVISVDENFMFEVEQSVQNTSETSVTLAPYGIIARHGIPTDAQNFFILHEGMVA-MNNGE 241 Query: 229 LVEQKYSDIEKSSISNFH-------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 L+E + DI +N W+G + Y+ + IP KYL Sbjct: 242 LIETGWEDIPDLDPVGGVPSKRIDGVTNGWIGFTGHYFMTNLIPDPAQQSRLTAKYLPR- 300 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 +Q + I G S + + LFAGAKE+ + YE + +F IDWGWF+F Sbjct: 301 TDIFQTEAVLPTQVIAAGSSASVSTQLFAGAKEWEALRDYEAA-GVYKFVDSIDWGWFFF 359 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP+F ++ + L+GN G+AI+ T+ +K L FPLA K YVS A MK +QP++++L++ Sbjct: 360 LTKPIFWVLHHLNILIGNMGVAIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMEKLKK 419 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 Q LQ+ M++LYK +NP AGC PI++QIP+FF++YKVI ++LE+RHAPF+G Sbjct: 420 D-AGDDRQKLQQGMMELYKREKVNPAAGCLPIIMQIPIFFSLYKVIFVTLELRHAPFFGP 478 Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 +DL+A DPT+IF +G+LP+ +P + +GI P+++ +SMF+Q K++P P D Sbjct: 479 FQDLSAPDPTSIFNFYGLLPWGVPEAGSVMALIFIGILPLLLGISMFLQQKLNPAPTDPT 538 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 Q MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + L+ + Sbjct: 539 QQMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDLLGNI 593 >gi|319403768|emb|CBI77352.1| translocase precursor subunit [Bartonella rochalimae ATCC BAA-1498] Length = 612 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 259/611 (42%), Positives = 372/611 (60%), Gaps = 32/611 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT------------------ 42 ME N N+F+AI LS ++ AW Y+ P+ ++ + Q Sbjct: 1 MEYNRNFFIAIGLSFVVFVAWHFLYIVPQQAKLQESKITTQKLSNHNAALPTNDPYFSHN 60 Query: 43 VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + V + + + R L+ + RV +K L GSINL G +FDDL L+ Y L V Sbjct: 61 ASTNDTVPVANRPITPEIRKAELAKTNRVLIKTNELEGSINLVGGKFDDLLLKKYRLKVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKI-LTPTTPIKLVF 160 SP + LL+P+ YFAE + S++ + LP SNT W L LTP+TPI LV+ Sbjct: 121 KKSPEIILLNPNGLPTTYFAEFGFTSSSLPAQALPQSNTKWQLEGDNTTLTPSTPITLVY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 N +F RT S+DEHY+F I D+++N S + S RI R P TN T+ + EG Sbjct: 181 NNGQGQIFHRTFSVDEHYMFTIKDSISNESNSPVYLSSYARIARAAPPEDTNATYLLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEK---------SSISNFHESNSWLGISDKYWASVFIPSKETS 270 I + GD SL +KY+ + + S+ + + W+GI+DKYWA IP ++T Sbjct: 241 MIGIAGD-SLKTEKYTALAELSPNPQNGQKSVIFPNITRGWIGITDKYWAVAVIPPQDTE 299 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + S+F Y + YQ+ + +T+ P ++ T TN LFAGAK I+HY+ L I +F Sbjct: 300 YTSRFVYFDRLNTHYQSDLQSALLTVPPHETKTITNRLFAGAKRVEIINHYQNQLKINKF 359 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +LIDWGWF FI KPMF L+ Y NFG+AI+L TV +K+L FPLA K Y S A +K Sbjct: 360 SLLIDWGWFDFITKPMFALIDILYKYTENFGVAILLITVLLKILLFPLAHKSYKSIARLK 419 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 IQP + E++EK+ + Q+A+I+LYKT INP AGCWPIL+Q P+FFA+YKV+ I+ Sbjct: 420 LIQPMMLEIKEKYADDRNK-QQQAIIELYKTKKINPFAGCWPILIQFPIFFALYKVLYIT 478 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P Sbjct: 479 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYAVPTFLILGAWPLIMGITMFLQMQMNPL 538 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D Q ++ WMP++F L+SFPAGL+IYW+W+N++SI+QQ++IMK G +I D L Sbjct: 539 PQDPTQVIVFRWMPIIFTIMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKIEFFDNL 598 Query: 571 RSTFSKNYNSQ 581 ++ K+ + Sbjct: 599 KAIVQKDSKKE 609 >gi|157964113|ref|YP_001498937.1| putative inner membrane protein translocase component YidC [Rickettsia massiliae MTU5] gi|166977409|sp|A8F0F4|OXAA_RICM5 RecName: Full=Inner membrane protein oxaA gi|157843889|gb|ABV84390.1| Preprotein translocase subunit YidC [Rickettsia massiliae MTU5] Length = 560 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 244/563 (43%), Positives = 350/563 (62%), Gaps = 6/563 (1%) Query: 1 MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M N N AI LS+ I++ WQ F V P ++ + + Q + Sbjct: 1 MNNNIINLVAAIILSLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATG 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 Q S R+++++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SPSNT+NA Sbjct: 61 IVVQEESQIQRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPSNTENA 120 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 YFAE+ VS ++++LPN++T+WN S +IL+P P+ L + N + + F TI++DE+YL Sbjct: 121 YFAEIGLVSNLSSVKLPNNDTIWNSDS-EILSPEKPVHLFWVNEDGVKFLVTITVDENYL 179 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F I T+ N S ++ G I R + +G I + D++L E Y DI+ Sbjct: 180 FTIEQTIVNYSDKELPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKD 238 Query: 240 SSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITIL 297 F W+GI+DKYW S IP K +++ S F Y L G RYQ F + I Sbjct: 239 KKSEKFAASKVDWIGITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIK 298 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PG++ + + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY V Sbjct: 299 PGENFSIKSRIFAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYV 358 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GNFG++I++ TV +KLL F LA K Y S MKN+QP+ID ++ + + L + ++ Sbjct: 359 GNFGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKAR-LNQEIMA 417 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NP+AGC PIL+QIPVFF+IYKV+ +++EMR PF+GWIKDL+A DPT IF LF Sbjct: 418 LYKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQTPFYGWIKDLSAPDPTTIFNLF 477 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 G+LPF P F+ +G WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP G Sbjct: 478 GLLPFSPPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVG 537 Query: 538 LIIYWSWSNVISIVQQAVIMKMH 560 L+IYWSW+N++SI+QQ I K + Sbjct: 538 LLIYWSWNNILSIIQQYYINKFN 560 >gi|91204826|ref|YP_537181.1| putative inner membrane protein translocase component YidC [Rickettsia bellii RML369-C] gi|157826396|ref|YP_001495460.1| putative inner membrane protein translocase component YidC [Rickettsia bellii OSU 85-389] gi|122426155|sp|Q1RKM2|OXAA_RICBR RecName: Full=Inner membrane protein oxaA gi|166977407|sp|A8GUC7|OXAA_RICB8 RecName: Full=Inner membrane protein oxaA gi|91068370|gb|ABE04092.1| Preprotein translocase subunit YidC [Rickettsia bellii RML369-C] gi|157801700|gb|ABV78423.1| putative inner membrane protein translocase component YidC [Rickettsia bellii OSU 85-389] Length = 559 Score = 555 bits (1429), Expect = e-155, Method: Composition-based stats. Identities = 242/562 (43%), Positives = 353/562 (62%), Gaps = 8/562 (1%) Query: 1 MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M N N AI LS+ I++ WQ F V P+ ++ + + + A + Sbjct: 1 MNNNIVNLVAAIVLSLGIIFGWQYFIVKPQQQKQQQQIALQKAKDLKKKESAQLEATPVI 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 Q S +PR+++ + +L GSI+LKG +FDDL L+ Y D+S NSP V L SPS+TK+A Sbjct: 61 --VQEASQAPRIKIDSNALSGSISLKGLRFDDLILKKYKQDLSENSPEVVLFSPSDTKDA 118 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 YFAE+ +VS ++++LPN+ T+WN S +ILTP P+ L + N + + F I++DE+YL Sbjct: 119 YFAEIGWVSNLSSVKLPNNETIWNSDS-EILTPEKPVNLFWVNEDGVKFLVAITVDENYL 177 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F I T+ NNS ++ G I R + +G I + D++L E Y DI+ Sbjct: 178 FTIEQTIVNNSNQELPVQSYGLINRKYTAVEKAVNILHQGPIGCI-DENLKEYSYDDIKD 236 Query: 240 SSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITIL 297 F W+GI+DKYW + IP K +++ S F Y + RYQ F + + Sbjct: 237 KKSEKFSASKVDWIGITDKYWLTSLIPDKSSNYSSNFNYAVKQEVERYQVDFISPVQIVK 296 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PG++ + LFAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY V Sbjct: 297 PGENFSIKGRLFAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYKYV 356 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GNFGI+I++ TV +KLL F LA K Y S MKN+QP+I+ ++ + + L + ++ Sbjct: 357 GNFGISILIVTVIIKLLMFTLANKSYRSMKRMKNLQPEINRIKNLYGDDKAR-LNQEIMA 415 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT+IF LF Sbjct: 416 LYKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTSIFNLF 475 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 G+L F LP F+ +G WPI+M+++MF+Q +MSP PAD QA ++ +MP+VF+ SSFPAG Sbjct: 476 GLLHFSLPSFLMIGAWPILMAITMFLQQRMSPEPADPVQAQVMKFMPLVFLVMFSSFPAG 535 Query: 538 LIIYWSWSNVISIVQQAVIMKM 559 L+IYWSW+N++SI+QQ I K+ Sbjct: 536 LLIYWSWNNILSIIQQYYINKL 557 >gi|51473293|ref|YP_067050.1| putative inner membrane protein translocase component YidC [Rickettsia typhi str. Wilmington] gi|81692326|sp|Q68XS4|OXAA_RICTY RecName: Full=Inner membrane protein oxaA gi|51459605|gb|AAU03568.1| 60 kDa inner membrane protein [Rickettsia typhi str. Wilmington] Length = 558 Score = 551 bits (1421), Expect = e-154, Method: Composition-based stats. Identities = 245/563 (43%), Positives = 353/563 (62%), Gaps = 8/563 (1%) Query: 1 MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M N N AI LS+ I++ WQ F + P ++ ++ Q + A + Sbjct: 1 MNNNIINLIAAIVLSLSIIFGWQYFVIKPEQKKQQQRMAIYKSENLKKQ--KALAEHTSN 58 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 Q R+++++ SL GSI LKG +FDDL L+ Y D+S NSP V L SP+NT+NA Sbjct: 59 ITVQEAGQVQRIKIESESLTGSIALKGLRFDDLILKKYKQDLSQNSPAVRLFSPANTENA 118 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 YFAE+ VS ++++LPNSNTVWN S ++L+P P+ L + N + I F TI++D++YL Sbjct: 119 YFAEIGLVSNLSSVKLPNSNTVWNSDS-EVLSPEKPVNLFWVNEDGIKFLVTITVDKNYL 177 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F I T+ NNS ++ G I R + +G I + D++L E Y DI+ Sbjct: 178 FTIEQTIINNSDKELPVQAYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKD 236 Query: 240 SSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITIL 297 + F W+GI+DKYW S IP K +S+ + F Y L G RYQ F + I Sbjct: 237 QKSAKFALSKVDWIGIADKYWLSSLIPDKSSSYSANFNYALKQGAERYQVDFISPVQVIK 296 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PGK+++ + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY V Sbjct: 297 PGKNLSIKSRIFAGAKKVDLLDEYEKSYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYV 356 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GNFG++I++ TV +KLL F LA K Y S MKN+QP+ID ++ + + L + ++ Sbjct: 357 GNFGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYNNDKAR-LNQEIMA 415 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NP+AGC PIL+QIPVFF+IYKV+ +++EMRHAPF+GWIKDL++ DPT IF LF Sbjct: 416 LYKKSKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRHAPFYGWIKDLSSPDPTTIFNLF 475 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 G+LPF P F+ +G WPI+M+++MF+ KMSP AD QA ++ +MP++F+F SSFP G Sbjct: 476 GLLPFAPPSFLMIGAWPILMAITMFLHQKMSPELADPIQAQVMKFMPLIFLFMFSSFPVG 535 Query: 538 LIIYWSWSNVISIVQQAVIMKMH 560 L+IYWSW+N++SI+QQ I K + Sbjct: 536 LLIYWSWNNILSIIQQYYINKFN 558 >gi|157825202|ref|YP_001492922.1| putative inner membrane protein translocase component YidC [Rickettsia akari str. Hartford] gi|166977406|sp|A8GLY9|OXAA_RICAH RecName: Full=Inner membrane protein oxaA gi|157799160|gb|ABV74414.1| putative inner membrane protein translocase component YidC [Rickettsia akari str. Hartford] Length = 560 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 236/563 (41%), Positives = 350/563 (62%), Gaps = 6/563 (1%) Query: 1 MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M N N AI LS+ I++ WQ F + P ++ + + Q + D Sbjct: 1 MNNNIINLIAAIVLSLSIIFGWQYFVIKPEQKKQQQQIAVQKAANLKKQQLKALVEPATD 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 Q S R+++++ SL GSI+LKG +FDDL L+ Y D+S NS V L SP+NT+++ Sbjct: 61 IVVQEESQVQRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSSDVVLFSPTNTEHS 120 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 YFAE+ VS ++++LPN++T+W+ G+IL+P P+ L + N + + F TI++D++YL Sbjct: 121 YFAEIGLVSNLSSVKLPNNDTIWSS-DGEILSPEKPVNLFWVNEDGVKFLVTITVDKNYL 179 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F I T+ NNS ++ G I R + +G I + D++L E Y DI+ Sbjct: 180 FTIEQTIVNNSDKELPIQSYGLINRKYTAVEKAVNILHQGPIGCI-DENLKEYSYDDIKD 238 Query: 240 SSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITIL 297 F W+GI+DKYW S IP K +++ S F Y + G +YQ F + I Sbjct: 239 KKSEKFAASKVDWIGITDKYWLSALIPDKSSNYSSNFNYAVKQGIEKYQVDFISPVQIIK 298 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PG++ + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY V Sbjct: 299 PGENFAIKSRIFAGAKKVDLLDQYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYV 358 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GNFG++I++ TV +KLL F LA K Y S +KN+QP+ID ++ + + L + ++ Sbjct: 359 GNFGVSILIVTVIIKLLMFTLANKSYRSMKKIKNLQPEIDRIKNLYSDDKAR-LNQEIMA 417 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NP+AGC PIL+QIPVFF+IYKV+ +++EMR A F+GWIKDL+A DPT IF LF Sbjct: 418 LYKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAQFYGWIKDLSAPDPTTIFNLF 477 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 G+LPF P F+ +G WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP G Sbjct: 478 GLLPFSPPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVG 537 Query: 538 LIIYWSWSNVISIVQQAVIMKMH 560 L+IYWSW+N++SI+QQ I K + Sbjct: 538 LLIYWSWNNILSIIQQYYINKFN 560 >gi|294010745|ref|YP_003544205.1| preprotein translocase YidC subunit [Sphingobium japonicum UT26S] gi|292674075|dbj|BAI95593.1| preprotein translocase YidC subunit [Sphingobium japonicum UT26S] Length = 567 Score = 549 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 211/565 (37%), Positives = 322/565 (56%), Gaps = 12/565 (2%) Query: 1 MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N +A+ L+ I++ W Q F+ E + + A Sbjct: 1 MDDKKNIILAVVLTAAILFGWPYVAQYFFPAANPPATKIEGGKTTPLTPSGAAPAAEGAA 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 I D A L SPRV ++ P + GSINLKGA+ DD+ L Y ++ +SP + L SPS T Sbjct: 61 AIRDLALVLKDSPRVAIRTPKITGSINLKGARIDDIVLPTYKETIAKSSPAIRLYSPSGT 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 K+AYFA + ++ P+ TVW S K LTPT+P+ L + N FE S+DE Sbjct: 121 KHAYFAGFGW--QGEGVKTPDGGTVWT-ASAKELTPTSPVTLSWNNGAGQTFEIRYSIDE 177 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 +Y+ V+N + G + R P +T+ + G + V + + YSD Sbjct: 178 NYMITAQQKVSNGGAGAVGVKSYGYVSRATPSADPDTWTIHVGPMGVFNGAANYDVNYSD 237 Query: 237 IEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +EK + F + W+G +DKYW S IP ++ +F Q + ++Q S I Sbjct: 238 LEKGPATQSFQSTGGWIGFTDKYWLSALIPDQKAAFTGQMR--KGAGTQFQTDMSLAPIM 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PGK++T TN LF GAKE T+ Y+ D +P F+ IDWGWFY+ KP+F L+ + + Sbjct: 296 VAPGKAVTQTNRLFVGAKEVKTLEAYQ-DAGVPLFDRAIDWGWFYWFEKPIFALLHWLFE 354 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +GNFG+AI+ T V+ L FP+A++Q+ S A M+ +QPK+ L+EK+K P+ LQ+ M Sbjct: 355 HIGNFGVAIICLTFVVRGLMFPVAQRQFASMAAMRAVQPKMKALQEKYKDDKPR-LQQEM 413 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NPLAGC PI +QIP+FFA+YKV+ +++EMRH PF WIKDL+A DP +I Sbjct: 414 MELYKREKVNPLAGCLPIFIQIPIFFALYKVLQLTIEMRHQPFVLWIKDLSAPDPLHIVN 473 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+LPF P F+ +G+ +++ +SM+ Q K++P D Q + MP + +F ++ F Sbjct: 474 LFGLLPFTPPAFLGIGVLALLLGISMYFQFKLNPAQMDPMQQQVFAIMPWMMMFIMAPFA 533 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 AGL++YW +N +S++QQ + K H Sbjct: 534 AGLLVYWITNNCLSMLQQWWLYKRH 558 >gi|229586285|ref|YP_002844786.1| putative inner membrane protein translocase component YidC [Rickettsia africae ESF-5] gi|259515719|sp|C3PM83|OXAA_RICAE RecName: Full=Membrane protein oxaA gi|228021335|gb|ACP53043.1| Preprotein translocase subunit YidC [Rickettsia africae ESF-5] Length = 560 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 239/549 (43%), Positives = 346/549 (63%), Gaps = 5/549 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + Q S R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKAVVEPATGIVVQEESQVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN S +IL+P P+ L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWNSDS-EILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWL 252 + G I R + +G I + D++L E Y DI+ F W+ Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEKFVASKVDWI 252 Query: 253 GISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 GI+DKYW S IP K +++ S F Y L G RYQ F + I PG+ + + +FAG Sbjct: 253 GITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGEDFSIKSRIFAG 312 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 AK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV + Sbjct: 313 AKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVII 372 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 KLL F LA K Y S MKN+QP+ID ++ + + L + ++ LYK +NP+AGC Sbjct: 373 KLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKAR-LNQEIMALYKKEKVNPVAGCL 431 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A+DPT IF LFG+LPF P F+ +G Sbjct: 432 PILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSASDPTTIFNLFGLLPFSPPLFLMIG 491 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+ Sbjct: 492 AWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSII 551 Query: 552 QQAVIMKMH 560 QQ I K + Sbjct: 552 QQYYINKFN 560 >gi|157827949|ref|YP_001494191.1| putative inner membrane protein translocase component YidC [Rickettsia rickettsii str. 'Sheila Smith'] gi|166977410|sp|A8GQK8|OXAA_RICRS RecName: Full=Inner membrane protein oxaA gi|157800430|gb|ABV75683.1| putative inner membrane protein translocase component YidC [Rickettsia rickettsii str. 'Sheila Smith'] Length = 560 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 240/549 (43%), Positives = 346/549 (63%), Gaps = 5/549 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + Q S R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATGIVVQEESQVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN S +IL+P P+ L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWNSDS-EILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH-ESNSWL 252 + G I R + +G I + D++L E Y DI+ F W+ Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEKFAASKVDWI 252 Query: 253 GISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 GI+DKYW S IP K +++ S F Y L G RYQ F + I PGK+ + + +FAG Sbjct: 253 GITDKYWLSSLIPDKSSNYSSNFNYALKQGIERYQVDFISPVQIIKPGKNFSIKSRIFAG 312 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 AK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV + Sbjct: 313 AKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVII 372 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 KLL F LA K Y S MKN+QP+ID ++ + + L + ++ LYK +NP+AGC Sbjct: 373 KLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKAR-LNQEIMALYKKEKVNPVAGCL 431 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF P F+ +G Sbjct: 432 PILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPFAPPSFLMIG 491 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+ Sbjct: 492 AWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSII 551 Query: 552 QQAVIMKMH 560 QQ I K + Sbjct: 552 QQYYINKFN 560 >gi|15891997|ref|NP_359711.1| putative inner membrane protein translocase component YidC [Rickettsia conorii str. Malish 7] gi|38503126|sp|Q92JJ3|OXAA_RICCN RecName: Full=Inner membrane protein oxaA gi|15619112|gb|AAL02612.1| 60 kD inner-membrane protein [Rickettsia conorii str. Malish 7] Length = 560 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 239/549 (43%), Positives = 347/549 (63%), Gaps = 5/549 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + Q S R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATGIVVQEESQVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN S +IL+P P+ L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWNSDS-EILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH-ESNSWL 252 + G I R + +G I + D++L E Y DI+ F W+ Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEKFAASKVDWI 252 Query: 253 GISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 GI+DKYW S IP K +++ S F Y L G RYQ F + I PG++ + + +FAG Sbjct: 253 GITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENFSIKSRIFAG 312 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 AK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV + Sbjct: 313 AKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVII 372 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 KLL F LA K Y S MKN+QP+ID ++ + + L + ++ LYK +NP+AGC Sbjct: 373 KLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKAR-LNQEIMALYKKEKVNPVAGCL 431 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A+DPT IF LFG+LPF P F+ +G Sbjct: 432 PILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSASDPTTIFNLFGLLPFSPPSFLMIG 491 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+ Sbjct: 492 AWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSII 551 Query: 552 QQAVIMKMH 560 QQ I K + Sbjct: 552 QQYYINKFN 560 >gi|307294062|ref|ZP_07573906.1| membrane protein insertase, YidC/Oxa1 family [Sphingobium chlorophenolicum L-1] gi|306880213|gb|EFN11430.1| membrane protein insertase, YidC/Oxa1 family [Sphingobium chlorophenolicum L-1] Length = 567 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 206/565 (36%), Positives = 321/565 (56%), Gaps = 12/565 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N +A+ L+ I++ W F+ E + + A Sbjct: 1 MDDKKNIILAVVLTAAILFGWPYVANHFFPAANPPATKIEGGKTTPLTPSGSAPAAEGAA 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + D A L PR+ ++ P + GSINLKGA+ DD+ L Y ++ +S + L SPS T Sbjct: 61 AVRDLALVLKDGPRIPIRTPKITGSINLKGARIDDIVLPTYKESIARDSHAIRLYSPSGT 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 K+AYFA + ++ P+ N+VW SGK LTP +P+ L + N FE S+DE Sbjct: 121 KDAYFAGFGW--QGEGLKTPDGNSVWT-ASGKELTPASPVTLTWNNGAGQSFEIRYSIDE 177 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 +Y+ V+N+ + G + R P T +T+ + G + V + + Y D Sbjct: 178 NYMITAQQKVSNSGAGTVAVKSYGYVSRAHPSTDPDTWTIHVGPMGVFNGAANYDVNYKD 237 Query: 237 IEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +EK S F + W+G +DKYW S +P ++ +F +Q + ++Q S + Sbjct: 238 LEKGPASQSFQSTGGWIGFTDKYWLSALVPDQKAAFSAQMR--KGAGTQFQTDISLAPVM 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + GKS+T TN LF GAKE T+ Y+ D IP F+ IDWGWFY+ KP+F L+ + + Sbjct: 296 LAAGKSVTQTNRLFVGAKEVKTLEAYQ-DAGIPLFDRAIDWGWFYWFEKPIFALLHWLFE 354 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +GNFG+AI+ T V+ L FP+A++Q+ S A M+ +QPK+ L+EK+K P+ LQ+ M Sbjct: 355 HIGNFGVAIICLTFVVRGLMFPVAQRQFASMAAMRAVQPKMKALQEKYKDDKPK-LQQEM 413 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NPLAGC PI +QIP+FFA+YKV+ +++EMRH PF WIKDL+A DP +I Sbjct: 414 MELYKREKVNPLAGCLPIFIQIPIFFALYKVLQLTIEMRHQPFVLWIKDLSAPDPLHILN 473 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+LPF P F+ +G+ +++ +SM+ Q K++P D Q + MP + +F ++ F Sbjct: 474 LFGLLPFTPPAFLGIGVLALLLGISMYFQFKLNPAQMDPMQQQVFAIMPWMMMFIMAPFA 533 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 AGL++YW +N +S++QQ + K H Sbjct: 534 AGLLVYWITNNCLSMLQQWWLYKRH 558 >gi|238650515|ref|YP_002916367.1| putative inner membrane protein translocase component YidC [Rickettsia peacockii str. Rustic] gi|259515722|sp|C4K168|OXAA_RICPU RecName: Full=Inner membrane protein oxaA gi|238624613|gb|ACR47319.1| putative inner membrane protein translocase component YidC [Rickettsia peacockii str. Rustic] Length = 560 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 238/549 (43%), Positives = 346/549 (63%), Gaps = 5/549 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + Q S R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATGIVVQEESQVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GS++LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSVSLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN S +IL+P P+ L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWNSDS-EILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH-ESNSWL 252 + G I R + +G I + D++L E Y DI+ F W+ Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEKFAASKVDWI 252 Query: 253 GISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 GI+DKYW S IP K +++ S F Y L G RYQ F + I PG++ + + +FAG Sbjct: 253 GITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENFSIKSRIFAG 312 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 AK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV + Sbjct: 313 AKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVII 372 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 KLL F LA K Y S MKN+QP+ID ++ + + L + ++ LYK +NP+AGC Sbjct: 373 KLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKAR-LNQEIMALYKKEKVNPVAGCL 431 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF P F+ +G Sbjct: 432 PILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPFSPPSFLMIG 491 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+ Sbjct: 492 AWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSII 551 Query: 552 QQAVIMKMH 560 QQ I K + Sbjct: 552 QQYYINKFN 560 >gi|315498839|ref|YP_004087643.1| membrane protein insertase, yidc/oxa1 family [Asticcacaulis excentricus CB 48] gi|315416851|gb|ADU13492.1| membrane protein insertase, YidC/Oxa1 family [Asticcacaulis excentricus CB 48] Length = 658 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 217/610 (35%), Positives = 349/610 (57%), Gaps = 32/610 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE---RKNIQTVKQPNQVDNSYAAVLI 58 + N N F+ +ALS+ I++ +Q F P++E+ +K I+ K P S Sbjct: 4 DDNRNMFIFLALSMAILFGYQFFVAGPQMEKERAAAMAQKKIEAAKSPVATPESLFVEGK 63 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R QA++ +PRV + +P+L GS++L GA+ DDL L+ Y + ++SP V L P ++ Sbjct: 64 LPRDQAVAATPRVAIDSPALKGSLSLAGARIDDLFLKQYKETLKADSPNVELFRPQGAEH 123 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 AY+AE +V AN LP+ N+VW ++SG +L+P + L + + FER +SLD+ Y Sbjct: 124 AYYAESGWVG-ANVPGLPSGNSVWTVVSGSVLSPGKDVVLGYDAGTGLRFERRLSLDDKY 182 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDK------SLVE 231 + + DTV N + + +P ++R P+T + EG I + E Sbjct: 183 MITVTDTVVNTTGAAVTLAPYANVVRQGAPETLGKNMILHEGGIGAFSKDATGKGYTTPE 242 Query: 232 QKYSDIEKSSIS---NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-------SDG 281 K+ + EK + W+G++DKYW + IP ++ H+ K D Sbjct: 243 FKFHNWEKDEKKANFKADSTGGWMGLTDKYWLAAVIPDQKAKIHASMKATDQTTANEKDF 302 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + YQA + A+ +T+ PGK ++ T +FAGAK+ + Y+ L +P F+ IDWG F+F Sbjct: 303 NFLYQAGYVADAVTVQPGKPVSVTYHIFAGAKQASLLAAYQDKLKLPAFDKAIDWGMFWF 362 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +PMF ++ + + VGNFG+AI+ TV VKL+FFPLA K Y S MK +QP+++EL++ Sbjct: 363 FTRPMFFVLDFLFKYVGNFGLAILGLTVLVKLIFFPLAHKSYESMTKMKMLQPQVEELKK 422 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K + +P Q +Q M+ LY+ +NP++GC PI +Q+PVF+A+YKV+ +++EMRHAPF+GW Sbjct: 423 KHEGNPQQ-MQIEMMGLYQKEKVNPMSGCLPIFVQMPVFYALYKVLFVTIEMRHAPFFGW 481 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGF----------MHVGIWPIIMSLSMFIQMKMSPPP 511 I+DL+ DPT +F LFG+LP+ +H+GI P++ SM++ M+PP Sbjct: 482 IQDLSDKDPTTMFNLFGLLPYDPAALPVIGGLMATSLHIGILPLLYGASMWLSQSMNPPM 541 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D Q I +MPV+F F ++ F +GL+IYW W+NV+++ QQ ++M+ G E + L Sbjct: 542 PDPMQRKIFAFMPVMFTFIMAPFASGLLIYWIWNNVLTVAQQYMLMRQMGVENPIDTLLG 601 Query: 572 STFSKNYNSQ 581 S+ Sbjct: 602 KVAKTKPKSE 611 >gi|319898441|ref|YP_004158534.1| translocase precursor subunit [Bartonella clarridgeiae 73] gi|319402405|emb|CBI75946.1| translocase precursor subunit [Bartonella clarridgeiae 73] Length = 612 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 255/611 (41%), Positives = 370/611 (60%), Gaps = 32/611 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA------ 54 ME N N+F+AI LS ++ AW Y+ P+ ++ + + N + Sbjct: 1 MEYNRNFFIAIGLSFVVFVAWHFLYIVPQQAKLQESKIIAHKLSNHNSTFPANDMHFSNH 60 Query: 55 ------------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 V + R L+ + RV +K L GSINL G +FDDL L+ Y L V Sbjct: 61 GLKDEIVSITNHHVTPEIRKAELAKTNRVLIKTNELEGSINLVGGKFDDLLLKKYRLTVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKI-LTPTTPIKLVF 160 SP + LL+P+ YFAE ++S++ + LP SNT W + LTP+TPI L++ Sbjct: 121 KTSPEIILLNPNGLTTTYFAEFSFISSSLPAKALPQSNTKWQIEGNNTILTPSTPITLIY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 N +F R S+D HY+F I D+++N S I S RI R P TN T+ + EG Sbjct: 181 NNGQGQIFRRIFSVDNHYMFTIKDSISNESSSPIHLSSYARIARAAPPEDTNATYFLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEK---------SSISNFHESNSWLGISDKYWASVFIPSKETS 270 I + GD SL +KY+ + + S+ + + W+GI+DKYWA IP ++ Sbjct: 241 MIGIAGD-SLKTEKYTALAELNPNPKNGQKSVIFSNVTGGWVGITDKYWAVAVIPPQDKE 299 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + S+F Y + YQ+ + +T+ P ++ T TN LFAGAK I+HY+ L I +F Sbjct: 300 YTSRFVYFDQLNTHYQSDLQSALLTVSPHETKTITNRLFAGAKRVEIINHYQNQLKINKF 359 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +LIDWGWF FI KPMF + Y GNFG+ I+L TV +K+L FPLA K Y S A++K Sbjct: 360 SLLIDWGWFDFITKPMFAFIDILYKYTGNFGVTILLITVLLKILLFPLAHKSYKSMAHIK 419 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 IQP + E++EK+ + Q+A+I+LYKT INPLAGCWP+L+Q P+FFA+YKV+ I+ Sbjct: 420 LIQPMMLEIKEKYAHDRNK-QQQAIIELYKTKKINPLAGCWPVLIQFPIFFALYKVLYIT 478 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWIKDLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P Sbjct: 479 IEMRHAPFFGWIKDLAAPDPTSIFNLFGLLPYTVPVFLTLGAWPLIMGITMFLQMQMNPL 538 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D Q ++ W+PV+F L+SFPAGL+IYW+W+N++SI+QQ++IMK G +I D L Sbjct: 539 PQDPTQVIVFRWIPVIFTVMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKIEFFDNL 598 Query: 571 RSTFSKNYNSQ 581 ++ K+ + Sbjct: 599 KAIVQKDTKKE 609 >gi|239946952|ref|ZP_04698705.1| inner membrane protein OxaA [Rickettsia endosymbiont of Ixodes scapularis] gi|239921228|gb|EER21252.1| inner membrane protein OxaA [Rickettsia endosymbiont of Ixodes scapularis] Length = 560 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 238/549 (43%), Positives = 346/549 (63%), Gaps = 5/549 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + D Q + R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATDIVVQEENQVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEIGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN S +IL+P + L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWNSNS-EILSPEKSVNLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH-ESNSWL 252 + G I R + +G I + D++L E Y DI+ F W+ Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEKFAAGKVDWI 252 Query: 253 GISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 GI+DKYW S IP K +++ S F Y L G RYQ F + I PG++ + + +FAG Sbjct: 253 GITDKYWLSSLIPDKSSNYSSNFNYALKQGAERYQVDFISPVQIIKPGENFSIKSRIFAG 312 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 AK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV + Sbjct: 313 AKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVII 372 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 KLL F LA K Y S MKN+QP+ID ++ + + L + ++ LYK +NP+AGC Sbjct: 373 KLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKAR-LNQEIMALYKKEKVNPVAGCL 431 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF P F+ +G Sbjct: 432 PILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPFLPPSFLMIG 491 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+ Sbjct: 492 AWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSII 551 Query: 552 QQAVIMKMH 560 QQ I K + Sbjct: 552 QQYYINKFN 560 >gi|67458523|ref|YP_246147.1| putative inner membrane protein translocase component YidC [Rickettsia felis URRWXCal2] gi|75537010|sp|Q4UN76|OXAA_RICFE RecName: Full=Inner membrane protein oxaA gi|67004056|gb|AAY60982.1| Preprotein translocase subunit YidC [Rickettsia felis URRWXCal2] Length = 560 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 238/549 (43%), Positives = 347/549 (63%), Gaps = 5/549 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + D Q S R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATDIVVQEESGVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GSI+LKG +FDDL L+ Y D+S+NSP V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSISLKGLRFDDLILKKYKQDLSNNSPEVRLFSPANTENAYFAEIGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN S +IL+P P+ L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWNSDS-EILSPEKPVNLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH-ESNSWL 252 + G I R + +G I + D++L E Y DI+ F W+ Sbjct: 194 LPIQSYGLINRKYTAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEKFAASKVDWI 252 Query: 253 GISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 GI+DKYW S IP K +++ S F Y L G RYQ F + I PG++ + + +FAG Sbjct: 253 GITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENFSIKSRIFAG 312 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 AK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV + Sbjct: 313 AKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVII 372 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 KLL F LA K Y S MKN+QP+ID ++ + + L + ++ LYK +NP+AGC Sbjct: 373 KLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKAR-LNQEIMALYKKEKVNPVAGCL 431 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 PIL+QIP+FF+IYKV+ +++EMR PF+GWIKDL+A DPT IF LFG+LPF P F+ +G Sbjct: 432 PILVQIPLFFSIYKVLYVTIEMRQVPFYGWIKDLSAPDPTTIFNLFGLLPFSPPSFLMIG 491 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+ Sbjct: 492 AWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSII 551 Query: 552 QQAVIMKMH 560 QQ I K + Sbjct: 552 QQYYINKFN 560 >gi|34580968|ref|ZP_00142448.1| 60 kD inner-membrane protein [Rickettsia sibirica 246] gi|28262353|gb|EAA25857.1| 60 kD inner-membrane protein [Rickettsia sibirica 246] Length = 560 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 240/549 (43%), Positives = 348/549 (63%), Gaps = 5/549 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + QA S R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQITVQKAENLKKQQLKALVEPATGIVVQAESQVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN S +IL+P P+ L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWNSDS-EILSPEKPVHLFWVNEDGVKFLVTIAVDENYLFTIEQTIVNNSNKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH-ESNSWL 252 + G I R + +G I + D++L E Y DI+ F W+ Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEKFAASKVDWI 252 Query: 253 GISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 GI+DKYW S IP K +++ S F Y L G RYQ F + I PG++ + + +FAG Sbjct: 253 GITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENFSIKSRIFAG 312 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 AK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV + Sbjct: 313 AKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVII 372 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 KLL F LA K Y S MKN+QP+ID ++ + + L + ++ LYK +NP+AGC Sbjct: 373 KLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKAR-LNQEIMALYKKEKVNPVAGCL 431 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A+DPT IF LFG+LPF P F+ +G Sbjct: 432 PILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSASDPTTIFNLFGLLPFSPPSFLMIG 491 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+ Sbjct: 492 AWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSII 551 Query: 552 QQAVIMKMH 560 QQ I K + Sbjct: 552 QQYYINKFN 560 >gi|83859293|ref|ZP_00952814.1| putative inner membrane protein translocase component YidC [Oceanicaulis alexandrii HTCC2633] gi|83852740|gb|EAP90593.1| putative inner membrane protein translocase component YidC [Oceanicaulis alexandrii HTCC2633] Length = 672 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 225/595 (37%), Positives = 351/595 (58%), Gaps = 23/595 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYP-----RIEEMNNERKNIQTV--KQPNQVDNSY 53 M N N+ +A +++ I++ +Q F + P E +Q P D+ + Sbjct: 1 MGENRNFLLAAVIAIGILFFYQAFILDPMARDREAAEQATAETQVQETGDDAPQATDSGF 60 Query: 54 AAVLIDD---RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 AA L ++ R AL+ S R+E++ +L GS++L GA+ DDL L Y +V S P VTL Sbjct: 61 AAGLGENGMSREDALARSQRIEIRTEALSGSLSLTGARIDDLQLLRYETEVDSGVP-VTL 119 Query: 111 LSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 +SP FA ++ AN + LP +T W L+ G +LT TTP+ L + + F Sbjct: 120 MSPEGFDGYQFAASGWLGGANAPQGLPGLSTNWTLVEGDVLTETTPVVLEHAAGD-LTFR 178 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKS 228 RTIS+DE+YLF + DTV NN + P + +H P N F + EG + V+ D + Sbjct: 179 RTISVDENYLFTVNDTVINNGSAAVSLRPYALVRQHGVPADLQNFFVLHEGAVGVI-DGT 237 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQA 287 ++K+ E + + W+GI+ KYW + P + + +QF+ +S +++ Sbjct: 238 HFDRKFKKWEDEGLIERNGPGGWMGITSKYWLAAVAPEGQPNVRAQFRVVSRPDRPVFES 297 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + ++ T+ PG ++ +T+++FAGAK+ P + YE DL I R M IDWG F+F+ +P F Sbjct: 298 NYLSDAETLAPGATLESTSYVFAGAKKQPILAAYENDLGIDRLTMAIDWGMFWFLTRPFF 357 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 + +FY ++GN+G+AIM+ T+ +KL+ FPL + + S A M++ PK+ E+RE++K P Sbjct: 358 AALHFFYGVLGNYGLAIMVVTLLIKLVLFPLNNRAFASMAKMRSAAPKMTEIRERYKDDP 417 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q QKAM++LY+ INP+AGC P+L QIP+FFA+YK + ISL+ RHAPF+GWI+D++A Sbjct: 418 -QAQQKAMMELYRKERINPVAGCLPMLPQIPIFFALYKTVFISLDARHAPFFGWIQDMSA 476 Query: 468 ADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 DPT I LFG+LP+ G + +G+WP++M ++M+ Q ++PPPADK Q I Sbjct: 477 PDPTMIGNLFGLLPYDPSGLPIVGPILAIGVWPLLMGVTMWAQQSLNPPPADKIQRQIFA 536 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +MPV+F ++ FPA LIIYWSW+N ++I QQ +IM+ G L SK Sbjct: 537 FMPVIFTIIMAPFPAALIIYWSWNNTLTIGQQYLIMRRQGVVTELDRNFFKLRSK 591 >gi|94495881|ref|ZP_01302460.1| 60 kDa inner membrane insertion protein [Sphingomonas sp. SKA58] gi|94424573|gb|EAT09595.1| 60 kDa inner membrane insertion protein [Sphingomonas sp. SKA58] Length = 568 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 206/565 (36%), Positives = 319/565 (56%), Gaps = 12/565 (2%) Query: 1 MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N +A+ L+ I++ W F+ E V +P+ + + Sbjct: 1 MDDKKNIILAVLLTAAILFGWPYISNYFFPTANPPATKIEGGKQVPVARPDADPAADSPA 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 I DRA L SPR+ ++ L GSINLKGA+ DD+ L Y ++ +SP V L SPS T Sbjct: 61 AIRDRALVLRESPRIPIRTAKLTGSINLKGARIDDIVLPTYKETIAKDSPAVRLYSPSGT 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 ++AYFA + + P+ NT+W G LTPT+P+ L + N LFE +S+D+ Sbjct: 121 QDAYFAGFGW--QGEGLRAPDRNTLWT-AQGSALTPTSPVTLSWNNGAGQLFEIRLSVDD 177 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 +Y+ V+N + P I R +T+ + G + V + + Y D Sbjct: 178 NYMITAAQKVSNTGTGTVGVKPYAYISRTGIPKDPDTWTIHVGPMGVFNGAANYDVNYKD 237 Query: 237 IEKS-SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 ++K S+ +F W+G +DKYW S +P+ + F QF+ +YQA + Sbjct: 238 LDKGPSVQSFQSKGGWIGFTDKYWLSALVPAADADFAGQFR--KGAGTQYQADVALGSNM 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PGK++T T LF GAKE T+ Y+ D +P F+ IDWGWFY+ KP+F L+ + + Sbjct: 296 VAPGKAVTQTQRLFVGAKEVKTLEAYQ-DAGVPLFDRAIDWGWFYWFEKPIFALLHWLFE 354 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +GNFG+AI+ T V+ + FP+A++Q+ S A M+ +QPK+ L+EK K Q LQ M Sbjct: 355 HIGNFGVAIICLTFVVRAIMFPIAQRQFSSMAAMRALQPKMKALQEKHKDDKQQ-LQMKM 413 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NPLAGC PI +QIP+FFA+YKV+ +++EMRH PF WIKDL+A DP +I Sbjct: 414 MELYKQEKVNPLAGCLPIFIQIPIFFALYKVLMLTIEMRHQPFVLWIKDLSAPDPLHILN 473 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+L F P F+ +G+ +++ +SM+ Q K++P D Q I+ MP + +F ++ F Sbjct: 474 LFGLLDFTPPAFLGIGVLALLLGISMYFQFKLNPTQMDPMQQQIMGIMPWMMMFIMAPFA 533 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 AGL++YW +N +S+ QQ + + H Sbjct: 534 AGLLVYWITNNCLSMAQQWWLYRKH 558 >gi|149913108|ref|ZP_01901642.1| 60 kDa inner membrane insertion protein [Roseobacter sp. AzwK-3b] gi|149813514|gb|EDM73340.1| 60 kDa inner membrane insertion protein [Roseobacter sp. AzwK-3b] Length = 604 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 223/609 (36%), Positives = 339/609 (55%), Gaps = 38/609 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 ++N N +A ALS +++ W + P +++ T + +QVD S A L Sbjct: 3 DQNKNLILATALSFVVILVWFVLFPPPEP-----PQQDATTPEAASQVDGSATAPLTATA 57 Query: 62 AQALSMSP------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + + RV + PSL GSI+LKG + D L+L+ Y + S VT Sbjct: 58 PATGATAGTPAPEAEEPEAPRVAISTPSLDGSISLKGGRIDQLSLKNYRETLEPGSDTVT 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIE--LPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 LLSP T +AY+A + +P +NTVW + SG L+P TP+ LV+ N + Sbjct: 118 LLSPIGTDSAYYALFGWAPGQGLTAETVPGANTVWKVESGDQLSPETPVTLVWDNQQGLT 177 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGD 226 F R IS+D+ ++F + +V N D +P G + RH P N F + EG I ++ D Sbjct: 178 FRREISVDDKFMFTVTQSVENTGADTPSLAPYGILARHGEPVDLKNFFILHEGGIRMV-D 236 Query: 227 KSLVEQKYSDIEKSSISNFHESN--SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 L E Y D E +S N W G +D YW + IPS + + F+ Sbjct: 237 GQLSEIDYDDFEPASNHETLTVNESGWTGFTDHYWMTTLIPSMAGAQVTTFQDTR--RNI 294 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQ N T+ PG+S T T LFAGAKE+ TI +Y+ + I RF IDWGWF+F+ K Sbjct: 295 YQTTVRKNTETVAPGQSATVTTRLFAGAKEWETIRNYQNEDGIDRFLDSIDWGWFFFLTK 354 Query: 345 PMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 P+F ++ + + G+ G AI+ T+ +K L PLA K YVS A MK +QP++++ Sbjct: 355 PIFAVLHWLNVTLAGMGIAGSMGWAIIGLTLLIKALLLPLAYKSYVSMAKMKELQPQMEK 414 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++E + Q LQK MI+LYK +NP +GC PILLQIP+FF++YKVI ++LE+RHAP+ Sbjct: 415 IKES-AGNDRQKLQKEMIELYKKEKVNPASGCLPILLQIPIFFSLYKVIFVTLELRHAPW 473 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPA 512 GWI DL+A DP++++ L+GILP+ P + +GI P+++ +SM++Q K++P P Sbjct: 474 IGWIDDLSAPDPSSLYNLWGILPWAAPEPGSIIALIFIGILPLLLGISMWLQQKLNPAPT 533 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D Q MI WMP VF+F L SF +GL++YW +N+I+ QQ +IM+ G + ++ + S Sbjct: 534 DPTQQMIFAWMPWVFMFMLGSFASGLVVYWIANNMITFAQQYLIMRSQGYKPDVLGNILS 593 Query: 573 TFSKNYNSQ 581 + + ++ Sbjct: 594 SMKRKPKTE 602 >gi|165932637|ref|YP_001649426.1| membrane protein insertase [Rickettsia rickettsii str. Iowa] gi|189036358|sp|B0BVZ4|OXAA_RICRO RecName: Full=Inner membrane protein oxaA gi|165907724|gb|ABY72020.1| 60 kDa inner membrane protein [Rickettsia rickettsii str. Iowa] Length = 560 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 239/549 (43%), Positives = 345/549 (62%), Gaps = 5/549 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + Q S R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATGIVVQEESQVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GSI+LKG +FDDL L+ Y D+S NS V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSISLKGLRFDDLILKKYKQDLSKNSSEVRLFSPANTENAYFAEVGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN S +IL+P P+ L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWNSDS-EILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH-ESNSWL 252 + G I R + +G I + D++L E Y DI+ F W+ Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCI-DENLKEYSYDDIKDKKSEKFAASKVDWI 252 Query: 253 GISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 GI+DKYW S IP K +++ S F Y L G RYQ F + I PGK+ + + +FAG Sbjct: 253 GITDKYWLSSLIPDKSSNYSSNFNYALKQGIERYQVDFISPVQIIKPGKNFSIKSRIFAG 312 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 AK+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV + Sbjct: 313 AKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVII 372 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 KLL F LA K Y S MKN+QP+ID ++ + + L + ++ LYK +NP+AGC Sbjct: 373 KLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKAR-LNQEIMALYKKEKVNPVAGCL 431 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF P F+ +G Sbjct: 432 PILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPFAPPSFLMIG 491 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+ Sbjct: 492 AWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSII 551 Query: 552 QQAVIMKMH 560 QQ I K + Sbjct: 552 QQYYINKFN 560 >gi|319405206|emb|CBI78811.1| translocase precursor subunit [Bartonella sp. AR 15-3] Length = 612 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 259/611 (42%), Positives = 368/611 (60%), Gaps = 32/611 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV----------- 49 ME N N+F+AI LS ++ AW YV P+ ++ + Q + N Sbjct: 1 MEYNRNFFIAIGLSFVVFVAWHFLYVIPQQAKLQESKIIAQKLSNHNAALPTNDMHFSNN 60 Query: 50 -------DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + + + R L+ + R+ +K L GSINL G +FDDL L+ Y L V Sbjct: 61 ALTDDTVPVTNRPITPEMRKAELAKTDRILIKTNELEGSINLVGGKFDDLLLKKYRLKVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKI-LTPTTPIKLVF 160 SP + LL+PS AYFAE + S++ + LP SNT W L LTP+TPI LV+ Sbjct: 121 KKSPEIILLNPSGLPTAYFAEFGFTSSSLPAKALPQSNTKWQLEGYNTILTPSTPITLVY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEG 219 N +F RT S+D+HY+F I D+++N S I S R+ R P TN T+ + EG Sbjct: 181 NNGQGQIFHRTFSVDDHYMFTIKDSISNESSSPIYISSYARVARTAPPEDTNATYLLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEK---------SSISNFHESNSWLGISDKYWASVFIPSKETS 270 I + G SL +KY+ + + SI + + W+GI+DKYWA IP ++ Sbjct: 241 MIGIAG-NSLKTEKYTALAELSPNPQNGQKSIIFPNITGGWIGITDKYWAVAVIPPQDKE 299 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + S+F Y + YQ+ + +T+ P ++ T N FAGAK I+HY+ L I +F Sbjct: 300 YTSRFVYFDRLNTHYQSDLQSALLTVSPHETKTIINRFFAGAKRVEIINHYQNQLKINKF 359 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +LIDWGWF FI KPMF L+ Y NFGIAI+L TV +K+L FPLA K Y S A +K Sbjct: 360 SLLIDWGWFDFITKPMFTLIDILYKYTENFGIAILLITVLLKILLFPLAHKSYKSMARIK 419 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 IQP + E++EK+ + Q+A+I+LYKT INP AGCWPIL+Q P+FFA+YKV+ I+ Sbjct: 420 LIQPMMLEIKEKYANDRNK-QQQAIIELYKTKKINPFAGCWPILVQFPIFFALYKVLYIT 478 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P Sbjct: 479 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYAVPTFLILGAWPLIMGITMFLQMQMNPL 538 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D Q ++ WMPV+F L+SFPAGL+IYW+W+N++SI+QQ++IMK G +I D L Sbjct: 539 PQDPTQVIVFRWMPVIFTVMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKIEFFDNL 598 Query: 571 RSTFSKNYNSQ 581 ++ K + Sbjct: 599 KAIVQKKSKKE 609 >gi|294675902|ref|YP_003576517.1| inner membrane protein OxaA [Rhodobacter capsulatus SB 1003] gi|294474722|gb|ADE84110.1| inner membrane protein OxaA [Rhodobacter capsulatus SB 1003] Length = 615 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 219/619 (35%), Positives = 321/619 (51%), Gaps = 46/619 (7%) Query: 1 ME-RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ +N N +A LS +++ W F+ + + Sbjct: 1 MDNQNRNLILATVLSALVIVVWTVFFPP----PKPEPTDPAVAEQTATPAPTAAPVATAA 56 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS----- 114 + +PRV + P+L GSI+L GA+FDDL+L+ YH + SP+V LL+P Sbjct: 57 PAVEPAPEAPRVTIDTPALTGSISLLGARFDDLSLKHYHEKLDPASPLVRLLAPVGGSDL 116 Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 N Y+ + + A ++P T+W +G LTP TP+ L + N + F RTI Sbjct: 117 NAAKPYYVVQGWSALAGVTAAQVPGPKTLWTAPAGAKLTPETPLVLTWDNGAGLTFTRTI 176 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 ++D YLF + D VTN + +P G I RH + + EG + + + L E Sbjct: 177 AVDPQYLFTVTDAVTNTGAAAVSIAPWGIIARHGIPAGNRVYVLHEGAVR-MTNGELQEI 235 Query: 233 KYSDIEKSSISNFH--------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 KY I ++ W G +DKYW + IP F S KY+ Sbjct: 236 KYKKITDLDALEGEGQADVRSADTGGWAGFTDKYWMTTLIPDT-ARFTSVVKYVPSA-DL 293 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA----------------IP 328 YQ + + I G S + T LFAGAKE+ I Y+ D I Sbjct: 294 YQTETRQPAVEIAAGASTSVTMRLFAGAKEWEAIAQYQNDPGMFDRLFGDKIDPTQPQIT 353 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 RF IDWGW+YF+ KPMF L+ + + ++GN G AI+ TV +KL+ FPLA+ Y+S A Sbjct: 354 RFVDSIDWGWYYFLTKPMFRLLHWLHAVLGNMGWAIIALTVIIKLIVFPLARTSYISMAK 413 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 MK IQP ++ L+E+ K Q LQ+ M++LYK INP AGC PILLQIP+FF++YKVI Sbjct: 414 MKEIQPAMEALKERTKDDK-QALQRGMMELYKREKINPAAGCLPILLQIPIFFSLYKVIY 472 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMF 502 +++E+ HAP+ GWIKDL+A DP++I LFG+LP+ P +G+ PI++ +SM+ Sbjct: 473 VTIELYHAPWIGWIKDLSAPDPSSILNLFGLLPYATPEPGSLLFIFSLGVLPILLGISMW 532 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 Q K++P P D QA I WMP +F+F L F +GL++YW +NVI+ +QQ IM +HG Sbjct: 533 FQQKLNPAPTDPSQAAIFAWMPWIFMFMLGGFASGLVLYWIANNVITFIQQYSIMSLHGK 592 Query: 563 EIGLIDRLRSTFSKNYNSQ 581 L + + F K + Sbjct: 593 RPDLFGNIIAGFRKKTAEE 611 >gi|85374954|ref|YP_459016.1| putative inner membrane protein translocase component YidC [Erythrobacter litoralis HTCC2594] gi|84788037|gb|ABC64219.1| preprotein translocase subunit [Erythrobacter litoralis HTCC2594] Length = 581 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 196/570 (34%), Positives = 308/570 (54%), Gaps = 18/570 (3%) Query: 1 MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNE------RKNIQTVKQPNQVD 50 M+ N +A+ L +++ W FY P E + +D Sbjct: 1 MDNQRNLLLAVVLCGVLIIGWDAAMNYFYPQPAEPIEAVEGSPTVASAPVAGSSTAATLD 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 N AA + + AL+ R+ + P + GSINL GA+ DD+ L+ + V +S V + Sbjct: 61 NGAAAQGPVELSDALATPERIRIDAPRVEGSINLVGARIDDIELKDHRATVDEDSGPVQM 120 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 +P NT YFA+ +V + LP S+TVW+ G+ LT P+ L + N F Sbjct: 121 FAPQNTDAQYFAQFGWVG--EGVSLPTSDTVWS-ADGETLTQGNPVTLSWDNGAGQQFRI 177 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 S+D++Y+ T N + P I R +T+T+ G + V GD + Sbjct: 178 RFSIDDNYMITAEQTAANTGGGPVVARPFATITRTSETASTDTWIAHSGPMGVFGDSADY 237 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 Y D+ + WLG SD Y+ +P + + F+ + G ++A Sbjct: 238 GPDYDDLADDGPYSGEGKARWLGFSDIYFLGALVPQADADPQTGFRPI--GENLFRADVI 295 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 T+ PG ++ T LFAGAKE + Y +D I +F + IDWGWF + KP+ L+ Sbjct: 296 YQPATVAPGNEVSRTTQLFAGAKESEILDQY-EDAGIDKFGLAIDWGWFRWFEKPLLWLL 354 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + ++LVGNFG+AI+L TV ++ L FP+A+KQ+ S A MK +QPK+ ++EK+K Q Sbjct: 355 NQLFDLVGNFGVAIILLTVIIRGLLFPIAQKQFGSMAAMKAVQPKMKAIQEKYKDDK-QK 413 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 Q+ ++ LYK +NPLAGC P+L+QIP+FFA+YKV+ +++EMRH PF WI+DL+A DP Sbjct: 414 QQQEIMALYKEEKVNPLAGCLPLLIQIPIFFALYKVLILAIEMRHQPFALWIEDLSAPDP 473 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 +IF LFG+LPF +PG + +G +++ ++M++ +M+P D Q I N MP V +F Sbjct: 474 AHIFNLFGLLPFEVPGLIAIGPLAVLLGVTMWLTFQMNPV-TDPIQRQIFNIMPWVLMFI 532 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ F AGL++YW+ SNV+++ QQ + H Sbjct: 533 MAPFAAGLLLYWNTSNVLTLAQQRYLYSKH 562 >gi|103485502|ref|YP_615063.1| putative inner membrane protein translocase component YidC [Sphingopyxis alaskensis RB2256] gi|98975579|gb|ABF51730.1| 60 kDa inner membrane insertion protein [Sphingopyxis alaskensis RB2256] Length = 584 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 206/583 (35%), Positives = 316/583 (54%), Gaps = 27/583 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N AI LSV I+ W F+ P ++ + Sbjct: 1 MDDKRNLIAAILLSVAILIGWNFVAERFFPTPDQPDVTKTVAGANGAPATAPTAQGQPSA 60 Query: 57 LIDDRAQ-------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 L A L+ R+ ++ P++ GSINL GA+ DD+ L Y + Sbjct: 61 LPAPTAATPAAAQAIRPVDVVLAEGQRIPIETPAIRGSINLVGARIDDITLTKYRQTIKK 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +SP V L +P T AYFA L + TA I+LP + TVW +G LTPTTP+ L + N Sbjct: 121 DSPAVRLFAPGGTPAAYFASLGW--TAQGIQLPGAGTVWT-ANGTKLTPTTPVTLSWTNT 177 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT---ATNTFGVQEGF 220 F S+D +YL TV N + S I R T +++ + G Sbjct: 178 TGQTFRIEYSIDANYLITAKQTVVNAGTAPVSLSSFALIDRLGKPTDPHEVDSWTIHVGP 237 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 L KS+ + Y D+E++ + + S WLG +DKYW + +P+K + S Sbjct: 238 TGYLDGKSVFDIDYDDLEEAPNRSVRYTSAGWLGFTDKYWLAAIVPAKGERVTAAIS--S 295 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 YQ F+ + + PG+ +T T+ +FAGAKE + Y+ D I R IDWGWF Sbjct: 296 PATNNYQTLFARDFTQVAPGQQLTATSRIFAGAKEVEILETYQDDQGITRLSNAIDWGWF 355 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 F P+F L+ + + VGNFG+AIM T+ ++LL FP+A +Q+ S A M+ +QPK+ L Sbjct: 356 EFFEVPIFKLLHWLFEKVGNFGLAIMALTLIIRLLMFPIANRQFSSMAQMRVVQPKMKAL 415 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E++K P+ +Q+ +++LYK INPLAGC PI++QIP+F+A+YKV+ +++EMRH PF Sbjct: 416 QERYKDDKPR-MQQELMKLYKDEKINPLAGCLPIVIQIPIFYALYKVLMLAIEMRHQPFI 474 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WIKDL+A DP +I LFG+LPF P + +G+ +I+ ++M++Q +++P PAD QA + Sbjct: 475 LWIKDLSAPDPLHILNLFGLLPFTPPSILAIGLLAVILGVTMWLQFRLNPAPADPVQAQV 534 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP +F+F ++ F AGL++YW +N++SI QQ + + A Sbjct: 535 FKIMPWLFMFIMAPFAAGLLLYWITNNILSIGQQQWMYRKFPA 577 >gi|330813521|ref|YP_004357760.1| inner membrane protein translocase component YidC, long form [Candidatus Pelagibacter sp. IMCC9063] gi|327486616|gb|AEA81021.1| inner membrane protein translocase component YidC, long form [Candidatus Pelagibacter sp. IMCC9063] Length = 564 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 215/568 (37%), Positives = 340/568 (59%), Gaps = 14/568 (2%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYP-------RIEEMNNERKNIQTVKQPNQVDNSYAA 55 N AI LS II+ WQ + P ++E+ + P+ Sbjct: 2 DTKNILTAIILSTIIIVGWQVLVIDPEIKKEQAKVEKTIQTKPTAGKPSAPSLNKKIQVQ 61 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 R +AL RV+L N + GSI+L GA DD+ L+ Y + NS V +L+P Sbjct: 62 KKKVSRQEALLTDQRVKLDNAKITGSISLVGALIDDVTLKNYQESLDENSKQVVILNPKK 121 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 Y+ E + ++ANNI +P++N+VW L + LTP TPI+L + N N ++F + I +D Sbjct: 122 INKGYYLESGW-ASANNINVPDNNSVWKLTRNRTLTPRTPIELEWDNQNGLVFTKKIEVD 180 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + YLF I +++ NNS + +I R + + + + EG + V+ D++L E+ Y Sbjct: 181 DQYLFSITESIKNNSKANVDLFHYSQITRKEKPQVQDFYILHEGLVGVI-DETLQEEDYD 239 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D++ + + ++ WLGI+DKYW + +P K+ +F+++F Y + A Y N + Sbjct: 240 DVKDKNQK-YQGTSGWLGITDKYWLTAIVPQKKQAFNAEFIYDTAYKANY---ILTNPTS 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I GK ++++ F GAKE TI Y + I +F++ IDWGWFYF KP+F ++ Y YN Sbjct: 296 IPSGKINSSSSQFFIGAKEVKTIDGYAESANINKFDLAIDWGWFYFFTKPLFFIIDYLYN 355 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 GNFG AI+L T +++LFFPLA + S A MK +QP+I +++ +K Q +Q M Sbjct: 356 FSGNFGWAIVLLTAGIRILFFPLANYSFASMAKMKALQPEIARMKDLYKDDK-QKIQTEM 414 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY+ INP++GC P+L+QIP FFAIYK++ ++LEMRHAPF+GWI+DL+A DPT++F Sbjct: 415 MGLYRKEKINPVSGCLPMLIQIPFFFAIYKMLFVTLEMRHAPFFGWIQDLSAPDPTSLFN 474 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG++P+ P F+ +G+WPI+M +SM+IQ K++P P D QA I + P+ L+SFP Sbjct: 475 LFGLIPWDPPSFLMIGVWPILMGVSMWIQQKLNPAPTDPIQAKIFAFFPLFLTVMLASFP 534 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +GL++YW+ +NV+++ QQ VI++ + Sbjct: 535 SGLVVYWTVNNVLTMAQQYVIIRKTTIK 562 >gi|197103856|ref|YP_002129233.1| preprotein translocase subunit [Phenylobacterium zucineum HLK1] gi|254773009|sp|B4RDV5|OXAA_PHEZH RecName: Full=Inner membrane protein oxaA gi|196477276|gb|ACG76804.1| preprotein translocase subunit [Phenylobacterium zucineum HLK1] Length = 598 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 214/593 (36%), Positives = 329/593 (55%), Gaps = 21/593 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK-----NIQTVKQPNQVDNSYAAV 56 + N + + +++ +Q F + P + E + Sbjct: 4 DNTRNTIIFFVCAALLLVLYQVFVIGPADKRRQAELARQAPPAAAAQAGQAGAPAAPQVP 63 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 R A++ +PRV++ P L GS++L+GA+ DDL L + V +SP V LL P Sbjct: 64 QAMTRQAAVAATPRVKIDTPMLTGSLSLRGARIDDLYLDRFRQTVEKDSPPVELLRPEGA 123 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 + +FAE+ +V AN LP+S VW L G L P P+ L + N + F R I +D+ Sbjct: 124 QYPWFAEVGWVG-ANVPGLPDSGAVWTLAQGSTLAPGQPVVLTYANGQGLTFTRRIEVDD 182 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 YLF I DTV N + + +P G + R P V EG I L D L + KY Sbjct: 183 RYLFTITDTVANTTGQPVTIAPYGTVQRQGVPADLGKNQIVHEGAIGWL-DGKLRQVKYG 241 Query: 236 DIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANE 293 K ++ + WLGI+DKYW + IP ++ + QF+ G A F Sbjct: 242 KWRKEGGGPAYNSTGGWLGITDKYWLAALIPGQQEAVTGQFRRTQAPGVDVLDANFVGAP 301 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 +TI G+ ++ T FAGAK+ P + YE+ L + F+ +DWG F+F+ +P+F + + Sbjct: 302 VTIPAGRQVSETTRFFAGAKQVPILRDYEQSLGVAHFDNAVDWGNFWFLTRPIFQFLEFI 361 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + +G FG+AI+ TV V+L+FFPLA KQY S MK +QP+++ELR+K+K P + Q+ Sbjct: 362 HRYIGTFGLAILALTVVVRLIFFPLANKQYESITKMKKVQPQMEELRKKYKDDPAK-QQQ 420 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 ++ LY+ +NPLAGC P+LLQIPVF+A+YKV+++++EMRHAPF GWI+DL+A DPT I Sbjct: 421 ELLALYQREKVNPLAGCLPLLLQIPVFYALYKVLTVTIEMRHAPFMGWIQDLSARDPTTI 480 Query: 474 FTLFGILPF----------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 + LFG++P+ +L G +H+G+ PI+ +M++ M MSPP D Q I M Sbjct: 481 WNLFGLIPWDPASAPLIGAFLNGPLHLGVLPILYGFTMWLTMAMSPPAGDPIQQKIFQLM 540 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 P++F F ++ F GL+IYW+WSNV++++QQ VIM+ + + +R K Sbjct: 541 PIIFTFIMAPFAVGLLIYWTWSNVLTLLQQYVIMRRFKVDNPIDQIIRKLTGK 593 >gi|40062654|gb|AAR37575.1| inner membrane protein, 60 kDa [uncultured marine bacterium 313] Length = 560 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 211/561 (37%), Positives = 331/561 (59%), Gaps = 9/561 (1%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 N +AI LS +++ W F+ P +E E + ++ + + +R A Sbjct: 4 KNVLIAIVLSTLVLVFWATFFEPPPVERQIVEDQITKSEEPSSPSIEKVELSKKIERNDA 63 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + RV+++N ++ GSI+L+GA DD+ + Y + S+ V L+P ++ Y+ E Sbjct: 64 IDSVARVKIENNNIKGSISLQGAIIDDIIFKNYKESLESDQK-VIFLNPKSSDEGYYIET 122 Query: 125 DYVSTANNI-ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIV 183 + S +N +LP NT+W + K+LTP PI L + N ++F + I LD+ YLFKI Sbjct: 123 GWASNSNEKLKLPLDNTIWKVKGNKVLTPNNPIVLEWDNNEGLIFTKKIELDDKYLFKIS 182 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 + N S F P +I R+ + + EGFI + D L E+ Y D+E Sbjct: 183 QGIKNTSNKSYEFFPYAQITRNYKPDVIPIYILHEGFIGMF-DDELKEEDYKDVEDEKFI 241 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP-GKSI 302 + S WLGI+DKYW + +P K F S+F + +Y+A F E T+L SI Sbjct: 242 -INSSKGWLGITDKYWLTAIVPEKGKKFKSEFLSID---GKYKANFIIKEPTVLSSNASI 297 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 T F AKE I Y + L+I +F++ IDWGWFYFI KP+F ++ YF+ L GNFG+ Sbjct: 298 TNEINAFVMAKEVAVIDGYAERLSIEKFDLTIDWGWFYFITKPLFFVIEYFFKLTGNFGV 357 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI++ T V+++FFPL+ + S A MK +QP++ L+E K + LQ+ M+ LYK Sbjct: 358 AIIILTALVRIVFFPLSNYSFRSMAKMKILQPEMIRLKELHKDDKTK-LQQEMMALYKRE 416 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP++GC P+L+QIP FFA+YK++ +++EMR PF+GWI+DL+A DPT+IF LFG++P+ Sbjct: 417 KVNPISGCLPVLIQIPFFFAVYKMLYVTIEMRQQPFFGWIQDLSARDPTSIFNLFGLIPW 476 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P F+ +G+WPI+M L+MF+Q K++P P D QA I ++P+ L+ FP+GL++YW Sbjct: 477 DPPTFLMIGVWPILMGLTMFLQQKLNPTPPDPMQAKIFMFLPIFLTIILAPFPSGLVVYW 536 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 + SNV+++ QQ VI++ + Sbjct: 537 TISNVLTMAQQWVIIRGTKVK 557 >gi|254455826|ref|ZP_05069255.1| 60 kDa inner membrane protein [Candidatus Pelagibacter sp. HTCC7211] gi|207082828|gb|EDZ60254.1| 60 kDa inner membrane protein [Candidatus Pelagibacter sp. HTCC7211] Length = 558 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 216/563 (38%), Positives = 331/563 (58%), Gaps = 7/563 (1%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N AI+LS ++ + ++ P I + KN + + R Sbjct: 2 DTRNVIAAISLSAAVIILYSLYFAPPPITKEQLAEKNKTEQTTDAPSLDQKETITEVSRE 61 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 +ALS S R++ +N S+IGSI+LKGA DDL + Y++ + S+ V LLSP + K+ Y Sbjct: 62 EALSQSKRIKFENQSIIGSISLKGAAIDDLTFKEYNVALESDEK-VKLLSPRSAKDGYLI 120 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 E +++T NI++PNSN+ W++ ILT +P+KL + N I FE+ ISLD+ +LF I Sbjct: 121 ESGFITTDKNIDIPNSNSEWSVSGSNILTDQSPVKLTWTNDQGITFEKEISLDDKFLFTI 180 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 V N++ + F P G+I+R + +N + + EG IA L D+ L+E+ Y DI++ Sbjct: 181 KQKVINSTNKEFDFYPYGQIIRKEIPEISNFYILHEGLIATL-DEELIEEDYDDIQEEKF 239 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 S + WLGISDK+W + IP F + F Y A + + + SI Sbjct: 240 SKTSQK-GWLGISDKFWITSLIPPNGKEFKTTFDYKDKFRANF---VGTEPLELKGNSSI 295 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + AK I Y + L I +F++ IDWG+ YFI KP+F + YF+ L+GN+G+ Sbjct: 296 EDKLQVIVAAKRVDVIDGYAESLNIDKFDLTIDWGFLYFITKPLFYGIDYFFKLLGNYGL 355 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+ T+ ++L FFPLA + S A MK +QP++ L++ K+ LQ+ M+ LYK Sbjct: 356 AIIAITICIRLAFFPLANFSFRSMAKMKALQPEMVRLKDLHKEDK-MKLQQEMMALYKKE 414 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP++GC PIL+QIPVFFA+YKV+ +++EMR PF+GWI+DL+ DPT++F LFG+LP+ Sbjct: 415 KVNPMSGCLPILVQIPVFFALYKVLFVTIEMRQMPFYGWIQDLSERDPTSLFNLFGLLPY 474 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 +P F+ +G WPI M +SMFIQ K++P P D QA I + P+ L+ FPAGL+IYW Sbjct: 475 DVPSFLMIGAWPIAMGVSMFIQQKLNPAPTDPMQAKIFMFFPLFLTIILAPFPAGLVIYW 534 Query: 543 SWSNVISIVQQAVIMKMHGAEIG 565 + +N++++ QQ IMK + Sbjct: 535 TVNNILTMAQQVFIMKRTTVKTA 557 >gi|294085069|ref|YP_003551829.1| 60 kDa inner membrane insertion protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664644|gb|ADE39745.1| 60 kDa inner membrane insertion protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 592 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 212/588 (36%), Positives = 338/588 (57%), Gaps = 34/588 (5%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEM-----------------------NNERKN 39 N N +AIALS+++++ WQ F + P++E+ +++ + Sbjct: 4 DNRNLILAIALSMVVLFGWQMFVIKPQLEQEAAQQELLAAQAQAEAALQASQQADSDTPS 63 Query: 40 IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 + N N+ A A+ +PR+ + P + GSI++ GA+ DD+ L Y Sbjct: 64 VAQSSGSNVAVNNGAVSGGISDAKPQDTAPRILIDAPLITGSISVMGARIDDVVLTDYKE 123 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 S +T L +++ +F E + S+ N +P ++T+W + +L+P P+ L Sbjct: 124 TQDPESKNITFLHKASSSQPFFVEFGWSSSDANQPMPRADTLWQ-TNKDVLSPGAPVTLR 182 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N + F R IS+++ YL D+V + I P G + RH + + + EG Sbjct: 183 WDNGQGLTFIRQISINDDYLISYDDSVQSTLDAAITLFPYGLVRRHGTPPTSGIYILHEG 242 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHES----NSWLGISDKYWASVFIPSKETSFHSQF 275 + V D++L E+ YSD+ + + W+G++DKYW + +P + T + F Sbjct: 243 PLGVF-DETLQEEDYSDLRDAEQGKIAVTPSKAGGWIGLTDKYWLAALLPDQNTRYDFSF 301 Query: 276 KYLSDGHARYQAKFS-ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 + L+ RYQ + + + + P S++ +FAGAK + Y +DL IP F++ I Sbjct: 302 QSLAGSGERYQVDYIDSKGLVLAPNTSVSAKGRVFAGAKIVKLLDQYREDLGIPNFDLAI 361 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GWFYF+ KP F +++ L+GNFG+A + TV VK++FFPLA K Y S M+ + P Sbjct: 362 DFGWFYFLTKPFFYAINWLNELLGNFGLATIAFTVVVKVVFFPLANKSYQSMGKMRLLAP 421 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 KI +LRE+F + L K M+ LYK +NP AGC P+LLQIPVFFA+YKV+ +++EMR Sbjct: 422 KIQQLRERFGEDK-MALNKEMMALYKAEKVNPAAGCLPVLLQIPVFFALYKVLFVTIEMR 480 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPF---YLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 HAPF+GWI DL+A DPT+IF +FG+LPF +LP F+ +G WPI+M +SMF+QM+++P P Sbjct: 481 HAPFFGWITDLSAPDPTSIFNVFGLLPFSVDFLPPFLQLGAWPIMMGVSMFLQMRLNPAP 540 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 D QA + MP+ F F L++FPAGL+IYW+W+N++S+ QQ IM+ Sbjct: 541 PDPIQAKVFQLMPIFFTFLLATFPAGLVIYWTWNNLLSMGQQWYIMRR 588 >gi|296115059|ref|ZP_06833701.1| 60 kDa inner membrane insertion protein [Gluconacetobacter hansenii ATCC 23769] gi|295978396|gb|EFG85132.1| 60 kDa inner membrane insertion protein [Gluconacetobacter hansenii ATCC 23769] Length = 719 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 208/586 (35%), Positives = 318/586 (54%), Gaps = 22/586 (3%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 VA+A+S +++ +Q +P + D + Sbjct: 4 KRLMVAVAMSAMVLLGFQYLVPHPDHKAATQPALGAGQDTPAAAPGADAGNGATDAKDD- 62 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 PR+ + + GSINL+GA+ DDL L+ YH V SP+V +L P + E+ Sbjct: 63 ----PRLAINTGRVGGSINLRGARLDDLVLKDYHETVKPGSPLVRILDPRQDPQSNLVEV 118 Query: 125 DYVSTANN-IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIV 183 +++ A + +P++ TVW+ LT P+ L + N +FE +++D++Y+F + Sbjct: 119 GWLNIAGGQVRVPDATTVWSADQ-ASLTQDQPVTLRWDNGQGQVFELVVAIDQNYMFSVT 177 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 V N + + P R+ R T + V EG I+V+ D L E Y + +I Sbjct: 178 QKVHNQAAGPVSLYPYSRVDRAYTPVETGGYLVHEGPISVI-DGRLDESSYKSVRNGTIP 236 Query: 244 ------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG--HARYQAKFSA-NEI 294 N + W GI+DKYW + IP +++ + Y+ + YQ F+A Sbjct: 237 PGNTSWNKPGTGGWSGITDKYWLTAVIPQQDSLVTGSYGYVPEAGHEGVYQVGFTARTPE 296 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I PG T +FAGAKE P + YE L IP F +D+GWF F+ P+F ++ + Sbjct: 297 VIAPGGDGVTETHVFAGAKEVPLLEKYEASLHIPSFWKAVDFGWFAFLTHPIFTVLDWLN 356 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 L+GNFG+A+M T+ VK LFFPLA KQ+ S M+ +QPKI LRE++K L + Sbjct: 357 TLLGNFGLALMAFTLVVKGLFFPLATKQFRSMGKMRQLQPKIKALRERYKDD-QMALNQH 415 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 MI LYK +NP +GC P+LLQIPVF+ +YKV+ +++EMRHAPF+GWI DL+AADPTNIF Sbjct: 416 MIALYKEEKVNPASGCLPMLLQIPVFWCLYKVLFVTIEMRHAPFFGWIHDLSAADPTNIF 475 Query: 475 TLFGILPF---YLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 TLFG++P+ ++ F +G+WPI L+MF Q K++P P AD Q + MP++F F Sbjct: 476 TLFGLIPWDPTHISTFFQLGLWPIAFGLTMFAQQKINPAPAADPAQQKMFQLMPILFTFF 535 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 ++ P+GL+IY+ W+N++++ QQAVI + AE +R K Sbjct: 536 MARQPSGLVIYYCWNNLLTMAQQAVIQRRVNAEAKAPVVIRPEKEK 581 >gi|262277963|ref|ZP_06055756.1| 60 kDa inner membrane insertion protein [alpha proteobacterium HIMB114] gi|262225066|gb|EEY75525.1| 60 kDa inner membrane insertion protein [alpha proteobacterium HIMB114] Length = 560 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 211/564 (37%), Positives = 334/564 (59%), Gaps = 10/564 (1%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD-- 60 N N A+ LS ++ WQ +Y P + N E+ Q +K S + ++ Sbjct: 2 ENKNVLAAVVLSTFVIMMWQFWYGEPVPQTQNQEQVQQQQLKGDKPSAPSISQKKVETKL 61 Query: 61 -RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 R+ A++ R++++N ++ GSI L GA DD+ L+ Y+ D + + V LL+P A Sbjct: 62 TRSDAINQGDRIKIENSAVEGSIALTGALIDDVTLKNYNQDNTGDQTKVILLNPKKYDQA 121 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 YF E + ++ N I +P++ T+W K LTP TP++L + N + F + ++D+ YL Sbjct: 122 YFLETGWATSGNEI-VPDNQTLWTAKGNKTLTPNTPVELEWNNGQGLTFIKKFTIDDQYL 180 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 I + + NNS + +I R + + F + EG + ++ D++L E+ Y DI + Sbjct: 181 ITINEEIKNNSNQTVNLFHYAQITRQEKPEIQDFFILHEGLLGIV-DETLTEEDYDDIVE 239 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 F+ S W+GI+DKYW + IP K +F ++F Y + Y + TI Sbjct: 240 KK-KTFNGSQGWVGITDKYWLTAIIPEKGKNFKAEFSYDKSFKSNYII---TDATTINVN 295 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 ++ + + LF GAKE I Y +F++ IDWGWF+F KP+F ++ Y + GN Sbjct: 296 QTGSNISNLFIGAKEVSVIDGYTASNGFHKFDLAIDWGWFHFFTKPLFFIIDYLFKWCGN 355 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 FGIAI+L T V+L+FFPLA + S A MK +QP++ L++ +K+ Q +Q M+ LY Sbjct: 356 FGIAIILLTAGVRLIFFPLANYSFASMAKMKALQPEMQRLKDLYKEDK-QKIQMEMMNLY 414 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NP++GC P++LQIP FFAIYK++ +++EMRHAPF+GWI+DL+AADPT+IF LFG+ Sbjct: 415 KREKVNPISGCLPVMLQIPFFFAIYKMLFVTIEMRHAPFYGWIQDLSAADPTSIFNLFGL 474 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 +P+ PGF+ +G WPIIM ++M+IQ K++P P D QA I + P L+SFP+GL+ Sbjct: 475 IPWDPPGFLIIGAWPIIMGVTMYIQQKLNPAPPDPIQAKIFMFFPFFLTILLASFPSGLV 534 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 IYWS +NV+++ QQ VI++ + Sbjct: 535 IYWSVNNVLTMAQQYVIIRKTKVK 558 >gi|209542536|ref|YP_002274765.1| 60 kDa inner membrane insertion protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530213|gb|ACI50150.1| 60 kDa inner membrane insertion protein [Gluconacetobacter diazotrophicus PAl 5] Length = 589 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 203/595 (34%), Positives = 331/595 (55%), Gaps = 24/595 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ + VA LS +++ ++ F P+ ++ QT +Q D + A + Sbjct: 1 MD-TKRFIVATLLSAMVLVGFEYF--MPKQAHHEVAQQAAQTSRQTPPTDAARAPAPVAG 57 Query: 61 RAQALSMSP------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + +P R+ + P + GSI+L GA+ DD+ LR YH V+ SP V +L P Sbjct: 58 ASSQPVSTPAPQAETRLAIDAPKVAGSIDLLGARLDDMVLRDYHETVAKGSPQVRILEPG 117 Query: 115 NTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + + + E+ +++ + +P++ TVW+ LT P+ L + N + F+ +S Sbjct: 118 HDQQPNYVEIGWMNLPGGQVRVPDATTVWS-ADAPKLTSDRPVTLSWDNGAGVTFQIVVS 176 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 +D HY+F I + N S + P R+ R T T + V EG I+V+ D L E Sbjct: 177 IDAHYMFGIEQRIVNRSAQPVSLYPYARVDRAYTPTETGGYLVHEGPISVI-DGRLDESS 235 Query: 234 YSDIEKSSISNFH------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA-RYQ 286 Y + + + W GI+DKYW + IP + T+ + Y ++G A YQ Sbjct: 236 YKSLRTGATPPGNLSWTKGGQGGWAGITDKYWLTAVIPQQGTAVTGSYGYQANGGAGVYQ 295 Query: 287 AKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 F A T + PG + T + +FAGAKE + Y+ L IP F +D+GWF F+ +P Sbjct: 296 VGFIAQAATVVAPGTTGATVSHVFAGAKEVNLLEQYQSSLHIPDFWKAVDFGWFAFLTRP 355 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F ++ + L+GNFG+A+M T+ VK LFFPLA +Q+ S A M+ +QPK+ ELRE++K Sbjct: 356 IFYVLDWLNTLLGNFGLALMAFTLLVKALFFPLATRQFRSMAKMRQLQPKVQELRERYKS 415 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 L + M+ LYK +NP AGC P+++QIPVF+++YK + I++EMRHAPF+GWI DL Sbjct: 416 D-QMALNQNMMALYKAEGVNPAAGCLPMVVQIPVFWSLYKDLYITIEMRHAPFFGWIHDL 474 Query: 466 AAADPTNIFTLFGILPF---YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 +A D TN+F LFG++P+ L ++ +G+WPI+ +MF+Q K++P P D Q + Sbjct: 475 SAPDLTNLFNLFGLIPWDPNVLSPYLQLGVWPILFGATMFLQQKLNPAPTDPAQQRMFQM 534 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MPV+F F ++ PAGL+IY+ W+N++++ QQ VI + + + + + + + Sbjct: 535 MPVLFTFFMARQPAGLVIYYCWNNLLTVAQQMVIQRRMKSAVDKVGAIPAAAGRK 589 >gi|302381828|ref|YP_003817651.1| membrane protein insertase, YidC/Oxa1 family [Brevundimonas subvibrioides ATCC 15264] gi|302192456|gb|ADL00028.1| membrane protein insertase, YidC/Oxa1 family [Brevundimonas subvibrioides ATCC 15264] Length = 614 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 218/609 (35%), Positives = 335/609 (55%), Gaps = 36/609 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------PN 47 E N + ++ II+ +Q F + P+ E+ ++ Q P Sbjct: 4 ENTRNMVIFAVMTAIILIVYQIFVMGPQAEQRRAAQEAAAAQAQEQQAAAAGTPTAGIPA 63 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + + DR +AL R+ + P+L GS++L+G + DDL L+ Y + SP Sbjct: 64 STGATGPVTFVTDRTKALGNVARIPVSTPTLQGSMSLQGGRIDDLFLKNYRQTIDPTSPY 123 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 L P ++AYFA+ + +P +NTVW L +G LTP TP+ L + N + Sbjct: 124 EELFRPQGMEHAYFAQFGWTGPNVPGGVPGANTVWRLTAGSTLTPATPVTLTWDNGQGLR 183 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGD 226 F R +S+D+ Y+F + DTV N I +P GR+ R P T + EG I Sbjct: 184 FTRVLSVDDRYMFTVTDTVANLGTAPITIAPYGRVERQGVPPALGKTQILHEGGIGTFSK 243 Query: 227 KS---LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG-H 282 + KY D K + WLGI+DKYW + IP ++ + ++F+ + Sbjct: 244 GDGYVTSQLKYGDWAKKPRQEHESTGGWLGITDKYWMAALIPPQDEAIQAEFRVTDAATY 303 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 ++A+ TI PG+ +T LFAGAK + YEK +PRF IDWG+ +F+ Sbjct: 304 DIHEARMLGAARTIQPGRQVTEVQHLFAGAKRNEILADYEKQFDLPRFIYAIDWGFLFFL 363 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 +P+F+L+ +FY LVGNFG+AI+L T+ +KL+ FPLA K Y S + M+ +QP +++++E+ Sbjct: 364 TRPIFLLVEFFYGLVGNFGVAILLLTLTIKLIMFPLANKSYESLSKMRKLQPLMEKIKEQ 423 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 K P Q QKA ++LY+ INPLAGC PIL+QIPVF+A+YKV+ +++EMRHAPF+GWI Sbjct: 424 NKDDP-QAQQKATMELYQKEKINPLAGCLPILVQIPVFYALYKVLYVTIEMRHAPFFGWI 482 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVG----------------IWPIIMSLSMFIQMK 506 +DL+A DPTNI+TLFG++P+ +G + I+ +M++Q Sbjct: 483 RDLSAPDPTNIWTLFGLIPWDPSSAPLIGGLIGVHTGGGFTLALSVLAILYGFTMWLQQA 542 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 M+PP D Q I +MP++F F ++SFPAGL++YW+W+N++SI QQ IM GAE + Sbjct: 543 MNPPAPDPVQRQIFAFMPIIFTFIMASFPAGLLVYWAWNNILSIAQQYFIMHRFGAENPI 602 Query: 567 IDRLRSTFS 575 D + Sbjct: 603 DDFIGKLKK 611 >gi|295690947|ref|YP_003594640.1| membrane protein insertase [Caulobacter segnis ATCC 21756] gi|295432850|gb|ADG12022.1| membrane protein insertase, YidC/Oxa1 family [Caulobacter segnis ATCC 21756] Length = 618 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 219/616 (35%), Positives = 334/616 (54%), Gaps = 42/616 (6%) Query: 1 MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV-------DNS 52 M+ N N + I + I+ +Q F + P+ ++ E + + +Q N Sbjct: 1 MQNDNKNTLMFIVSAFAILIGYQFFILGPQQKKAEAEMRAKKAAQQQTAAQAGVPLDANG 60 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A L R QA + SPR+ + P+L GSI LKG + DDL LR Y + NSP V L Sbjct: 61 NPAPLRLSRDQAKAQSPRIVVDTPALSGSIALKGGRIDDLFLRKYAETTAKNSPPVELFR 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 P ++A+FA+ + AN LP+S TVW G++L P +P+ L + N + F R I Sbjct: 121 PEGAEHAWFADFGWAG-ANLPGLPDSRTVWTAAPGQVLRPNSPVTLTYDNGMGLTFTRVI 179 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVE 231 ++D+ +F + D+V NN + +P + R T V EG I VLG + Sbjct: 180 AVDDQAMFSVTDSVKNNGTAAFQLAPYATVQRQGITDHLGKTQIVHEGAIGVLGSGKDQK 239 Query: 232 Q---KYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQ 286 KY +K ++ F W GI+DKYW + IP + + +Q++ + G Y Sbjct: 240 LELAKYQKWKKDKPLTTFDSVGGWAGITDKYWLAALIPGQTEAIKAQYRVTNVAGVDVYD 299 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD---------------LAIPRFE 331 F + PG ++T T LFAGAK P + Y+ IPRF+ Sbjct: 300 VNFVGPTQALNPGATLTQTTRLFAGAKTVPLLRKYQYGGAKPPAWWEFWSNAKAEIPRFD 359 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +DWG F +P+F ++ FY +VGNFG+AI+ TV +KL+ +P+A K Y S A MK Sbjct: 360 WAVDWGMFSMFTRPIFNVLEIFYKMVGNFGLAILALTVLLKLILYPMADKSYESMAKMKK 419 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++++L+ K K P + Q+ M+ LY+ INP+ GC P+L+QIPVF+A+YKV+++++ Sbjct: 420 IAPEVEKLKAKHKDDPAK-QQQEMMALYQKEKINPMMGCLPMLIQIPVFYALYKVLTVTI 478 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPF----------YLPGFMHVGIWPIIMSLSM 501 EMRHAPF+GWI+DL+A DP+ IF LFG +P+ +L G +H+G+WP++ +M Sbjct: 479 EMRHAPFFGWIQDLSARDPSTIFNLFGAIPWDPATAPLIGGFLGGPLHIGVWPLLYGFTM 538 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ M+PP D Q I P++F F LS F GL+IYW WSNV++IVQQ V+M+ + Sbjct: 539 WLTTAMNPPAGDPIQQKIFQLFPIIFTFTLSQFAVGLVIYWCWSNVLTIVQQYVMMRRYK 598 Query: 562 AEIGLIDRLRSTFSKN 577 E + DR+ + Sbjct: 599 VENPI-DRIIARLQGK 613 >gi|114770125|ref|ZP_01447663.1| putative inner membrane protein translocase component YidC [alpha proteobacterium HTCC2255] gi|114548962|gb|EAU51845.1| putative inner membrane protein translocase component YidC [alpha proteobacterium HTCC2255] Length = 612 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 216/611 (35%), Positives = 343/611 (56%), Gaps = 39/611 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--------KNIQTVKQPNQVDNSY 53 + N N +A LS++++ W F+ + + + T + Sbjct: 4 DNNKNMILASVLSMLVLLTWFYFFPQEDYQPVATNQITASENGIAAAPTAGNGIASAPAI 63 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + + + R AL + RVE+++ + GS++L GA+ DDL L Y++ ++ S VTLLSP Sbjct: 64 STTVAETREIALEKTKRVEIRSNRIKGSLSLTGARIDDLKLLDYNVKLNDTSEKVTLLSP 123 Query: 114 SNTKNAYFAELDY--VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + +AY+ + + + ++P + T+W++ +G ILTP + + L + N+N ++F R Sbjct: 124 AGGPSAYYILHGFSPAGSLDFDDVPTATTIWSVENGNILTPNSSVTLKWDNSNGLVFYRK 183 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP----------QTATNTFGVQEGFI 221 I +D+ Y+F I +V NN+ I +P G I + P + + + EG I Sbjct: 184 IEVDDDYMFTITQSVQNNTNANISLAPYGLIAQKGPIARAAYGRQESSKNGVYILHEG-I 242 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFH 272 + SL E YSD+ S+ W+G + KYW + IP ++F Sbjct: 243 VLQTGSSLEEIDYSDMPDEDFSSSERANLKVVDSTKKGWIGFTGKYWMTTLIPD-NSAFK 301 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + KY +G RYQA+ I IL G+ + LFAGAKE+ TI HY + F Sbjct: 302 AVSKYT-EGADRYQAEARQETIQILAGQRRDVQSRLFAGAKEYATIQHYGDKEGVTDFVD 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 IDWG F+FI KPMF L+ + L+GN G AI+ T+ +K + FPLA K +VS A MK + Sbjct: 361 SIDWGMFFFITKPMFALLHFLNGLIGNMGWAIIALTLIIKTILFPLAYKSFVSMARMKEL 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP++++L+EK + Q +QKA +++Y+T +NP AGC PILLQIP+FF++YKVI ++LE Sbjct: 421 QPEMEKLKEKHGED-RQAMQKATMEMYRTKKVNPAAGCLPILLQIPIFFSLYKVIFVTLE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMK 506 +RHAPF GW+KDL+ DP+++ LFG++P+ PG + +G+WPI+M ++M++Q K Sbjct: 480 LRHAPFIGWLKDLSVPDPSSLLNLFGLMPWDAPGPNSFFVILSIGVWPILMGITMWLQQK 539 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 ++P P DK QAMI WMP VF+F L F +GL+IYW +N ++ +QQ IM+ G + Sbjct: 540 LNPAPTDKTQAMIFAWMPWVFMFMLGGFASGLVIYWVANNTLTFMQQYTIMRSQGVNPDI 599 Query: 567 IDRLRSTFSKN 577 + + F K Sbjct: 600 LGNMFKRFKKE 610 >gi|16125020|ref|NP_419584.1| putative inner membrane protein translocase component YidC [Caulobacter crescentus CB15] gi|221233743|ref|YP_002516179.1| inner membrane protein translocase component YidC [Caulobacter crescentus NA1000] gi|38503160|sp|Q9AA40|OXAA_CAUCR RecName: Full=Inner membrane protein oxaA gi|254772763|sp|B8H1E8|OXAA_CAUCN RecName: Full=Inner membrane protein oxaA gi|13422004|gb|AAK22752.1| 60 kd inner-membrane protein [Caulobacter crescentus CB15] gi|220962915|gb|ACL94271.1| inner membrane protein translocase component yidC [Caulobacter crescentus NA1000] Length = 615 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 221/613 (36%), Positives = 337/613 (54%), Gaps = 38/613 (6%) Query: 1 MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV-------DNS 52 M+ N N + I + I+ +Q F + P+ ++ E + + +Q + N Sbjct: 1 MQNDNKNTLMFIVSAFAILIGYQFFVLGPQQKKAEAEFRAKKAAEQQSAAKAGVTLDANG 60 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A L R A ++SPR+E+ P+L GSI LKGA+ DDL LR Y +SP V L Sbjct: 61 NPAPLRLSRDAAKALSPRIEVDTPALSGSIALKGARIDDLFLRKYDETTKKDSPPVELFR 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 P ++A+FA+ + AN LP+S TVW G++L P +P+ L + N + F R I Sbjct: 121 PEGAEHAWFADFGWAG-ANLPGLPDSRTVWTAAPGQVLRPNSPVTLTYDNGLGLTFTRVI 179 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA-TNTFGVQEGFIAVLG---DKS 228 ++D+ +F + D+V NN + ++ +P + R A V EG I VLG ++ Sbjct: 180 AVDDQAMFTVTDSVKNNGTNGLQLAPYATVQRQGISDALGKNQIVHEGAIGVLGATDEQK 239 Query: 229 LVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQ 286 L KY +K + +F W GI+DKYW + IP + + +Q++ + G Y Sbjct: 240 LEMAKYGKWKKDKPLQSFDSVGGWTGITDKYWLAALIPGQNQAIKAQYRVTNVAGIDVYD 299 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL---------------AIPRFE 331 F + PG +++ T LFAGAK P + YE IPRF+ Sbjct: 300 VNFLGPVQVLNPGATVSQTTRLFAGAKTVPLLRKYEYGATPAPAIWEFWNKTKAEIPRFD 359 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +DWG F F +P+F ++ FY LVGNFG+AI+L TV +KL+ +P+A K Y S A MK Sbjct: 360 DAVDWGMFRFFTRPIFNILEVFYKLVGNFGLAILLLTVVLKLVLYPMADKSYESMAKMKK 419 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++++L+ K K P + Q+ M+ LY+ INP+ GC P+L+QIPVF+A+YKV+++++ Sbjct: 420 IAPEVEKLKAKHKDDPAK-QQQEMMALYQKEKINPMMGCLPMLIQIPVFYALYKVLTVTI 478 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-------HVGIWPIIMSLSMFIQ 504 EMRHAPF+GWI+DL+A DPT +F LFG++P+ H+G+WP++ +M++ Sbjct: 479 EMRHAPFFGWIQDLSAPDPTTMFNLFGLIPWDPGSLPLIGAMIAHLGVWPLLYGFTMWLT 538 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M+PP D Q I W PV+F F LS F GL+IYW WSNV++I QQ +IM+ + E Sbjct: 539 TAMNPPAGDPIQQKIFQWFPVIFTFTLSGFAVGLVIYWCWSNVLTIFQQYIIMRRYKVEN 598 Query: 565 GLIDRLRSTFSKN 577 + + K Sbjct: 599 PIDQIIARLRGKT 611 >gi|296535613|ref|ZP_06897793.1| inner membrane protein OxaA [Roseomonas cervicalis ATCC 49957] gi|296264068|gb|EFH10513.1| inner membrane protein OxaA [Roseomonas cervicalis ATCC 49957] Length = 524 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 199/502 (39%), Positives = 302/502 (60%), Gaps = 12/502 (2%) Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD 125 R+ +++P + GS+ L+GA+ DDL L+ Y +++SP+V + +P YFA+ Sbjct: 5 PPPQRLRVESPRVSGSLLLRGARLDDLVLKDYRETTAASSPLVRMFAPREELQPYFAQWG 64 Query: 126 YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDT 185 + S +P++ T W SG L P +P+ L ++N F+ +SLD +Y+F+ Sbjct: 65 WSSADGRTRVPDNETDWT-ASGGPLGPDSPVTLSWENGQGQTFQIVLSLDRNYMFQAEQR 123 Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-- 243 V N++ D + P R+ R + + + EGF+ VL L E Y + Sbjct: 124 VINSAADPVLVLPWSRVRRERTPHVAGFYILHEGFVGVLN-GRLNELTYKSAKDDGARTR 182 Query: 244 ----NFHESNSWLGISDKYWASVFIP-SKETSFHSQFKYLS-DGHARYQAKFSAN-EITI 296 S W G +DKYW + P + +++++ +G R+Q F+ T+ Sbjct: 183 GVALEQETSGGWAGFTDKYWLAAIAPVDAAQPLRAAWRHVAENGEDRWQVDFATPQPQTV 242 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G + + LFAGAKE + Y +L I F+ ID+GWFYF+ KP F + Y + L Sbjct: 243 ASGATGSIATRLFAGAKEVHLLDAYRDNLGITDFDKAIDFGWFYFLTKPFFYALDYLFKL 302 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 GNFGIAI++ TV +KL FFPLA K Y S A MK + PK+ E+RE++K P + Q M+ Sbjct: 303 FGNFGIAILVFTVALKLAFFPLANKAYKSMARMKVLTPKMQEIRERYKDDPAKA-QSEMM 361 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LY++ +NP +GC PIL+QIPVFFA+YKV+ +++EMRHAPF+GWI+DL+A DPTN+F L Sbjct: 362 ALYRSEKVNPASGCLPILIQIPVFFALYKVLFVTIEMRHAPFFGWIRDLSAPDPTNLFNL 421 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 FG++P+ P +H+ +W IIM ++MF+Q K++P PAD QA I WMP++F F L+SFPA Sbjct: 422 FGLIPWDPPALLHMPVWAIIMGVTMFVQQKLNPAPADPIQAKIFTWMPIIFTFMLASFPA 481 Query: 537 GLIIYWSWSNVISIVQQAVIMK 558 GL+IYWSW+N++S+ QQ IM+ Sbjct: 482 GLVIYWSWNNLLSVAQQWYIMR 503 >gi|326386366|ref|ZP_08207989.1| putative inner membrane protein translocase component YidC [Novosphingobium nitrogenifigens DSM 19370] gi|326209027|gb|EGD59821.1| putative inner membrane protein translocase component YidC [Novosphingobium nitrogenifigens DSM 19370] Length = 606 Score = 518 bits (1334), Expect = e-144, Method: Composition-based stats. Identities = 192/580 (33%), Positives = 301/580 (51%), Gaps = 26/580 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----NFYVYP----------------RIEEMNNERKNI 40 ME+ N A+ L II+ W FY + + + Sbjct: 1 MEKQRNLIWAVVLMGIILIGWDLGLRYFYPHAGEHPHAAASSTATSASGTAPASGDAAPA 60 Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 + ++ + A+ D AL+ RV + P + GSINL G DDL L + Sbjct: 61 KPTREGGLQSPADIAIEAQDLKTALAAPTRVAIAAPGVSGSINLVGGLIDDLTLNRHRET 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 + SP V L SP+ T ++A+L + N ++ P NTVW + LTPTTP+ L + Sbjct: 121 SDAGSPPVRLFSPAGTPAQHYAQLGWTG-DNGVQTPQGNTVWQADRTR-LTPTTPVTLRW 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 NA F ++DE+Y+ +VTN + P I R + +T+ V G Sbjct: 179 TNATGQTFAIRYAIDENYMISAQQSVTNAGTAPVSVKPFALINRTDRTASLDTWQVHSGP 238 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 I Y D+ + +W+G +D YW S +P T F+ L + Sbjct: 239 IGAFDGSVDFASHYKDVNAAGEVAPAGQTNWIGFTDIYWLSALVPDAGTKPSGSFRALGN 298 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G ++A T+ PG++++ + LFAGAKE + YE I F + IDWGWF Sbjct: 299 G--FFRADLIYPAATVAPGQTVSQSLRLFAGAKENRVLEAYEAQ-GISNFSLAIDWGWFR 355 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + KP+F L+ ++ V NFGIAI+L T+ V+ + FP+A++Q+ S A M+ IQPK+ ++ Sbjct: 356 WFEKPIFWLLDSLFHAVKNFGIAIILLTLIVRGIMFPVAQRQFASMAAMRAIQPKMKAIQ 415 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E++K P+ Q+ ++ LYK +NPLAGC P+ LQIPVFFA+YKV+ +++EMRH PF Sbjct: 416 ERYKDDKPR-QQQEIMALYKEEGVNPLAGCLPMFLQIPVFFALYKVLVLTIEMRHQPFAL 474 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL++ DPT++ LFG+LPF G +G+ +++ +M++Q K+ P D Q ++ Sbjct: 475 WIHDLSSPDPTHLLNLFGLLPFTPTGMFGIGVLALLLGATMWLQFKLQPAAMDPSQQQVM 534 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 MP + +F +S+F +GL+IYW SN+++I QQ + H Sbjct: 535 AIMPWMMMFVMSTFASGLLIYWITSNLLTIAQQRYLYSRH 574 >gi|87198602|ref|YP_495859.1| putative inner membrane protein translocase component YidC [Novosphingobium aromaticivorans DSM 12444] gi|87134283|gb|ABD25025.1| protein translocase subunit yidC [Novosphingobium aromaticivorans DSM 12444] Length = 600 Score = 517 bits (1331), Expect = e-144, Method: Composition-based stats. Identities = 195/574 (33%), Positives = 308/574 (53%), Gaps = 21/574 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTV--KQPNQV----- 49 M+ N +A+ L+ I++ W FY P + + + ++P + Sbjct: 1 MQNQRNLIMAVVLTGILLLGWDVAMRWFYPQPAQKPKVEAAASAEPANGEKPKRTREGGL 60 Query: 50 -DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 + A+ D AQ L+ R+ + P L GSINLKGA DD+ L + V NS V Sbjct: 61 QNAGDIALEKKDLAQELAAGHRIAIDAPGLKGSINLKGALVDDVTLARHREGVDRNSAPV 120 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L SP+ T +FA++ +V + P++NT+W G LTP TP+ L + NA+ + Sbjct: 121 RLFSPAGTPAQHFAQIGWVG--EGVAAPDANTMWQ-ADGAKLTPQTPVTLRWTNASGQTY 177 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 ++D Y+ V N + P + R + +T+ V G I Sbjct: 178 SIRYAIDGDYMITATQGVANTGPAPVVVRPFALVNRTDKTASLDTWNVHSGPIGAFDGSV 237 Query: 229 LVEQKYSDIEK--SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + YS + + F + +W+G +D YW S IP + F+ L G Y+ Sbjct: 238 NFDNNYSTVAEAEGGAIPFKGTANWIGFTDIYWLSALIPDANAKAEAAFRSL--GQGVYR 295 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 A ++I PGK+++ T LFAG KE + YE + F + IDWGWF + KP+ Sbjct: 296 ADLIYPSVSIAPGKALSQTVRLFAGGKENAVLEKYEAA-GVTNFSLSIDWGWFRWFEKPI 354 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + VGNFG+AI+L T+ V+ + FP+A++Q+ S A M+ +QPK+ ++E++K Sbjct: 355 FWLLDSIFKKVGNFGVAIILLTLIVRGVMFPIAQRQFASMAAMRALQPKMKAIQERYKDD 414 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q Q+ +++LYK +NPLAGC PI LQIPVFFA+YKV+ +++EMRH PF WIKDL+ Sbjct: 415 K-QKQQQEIMELYKREKVNPLAGCLPIFLQIPVFFALYKVLVLTIEMRHQPFALWIKDLS 473 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 A DP ++ LFG+LPF P F+ +G+ I++ ++M++Q K+ P D Q + +MP + Sbjct: 474 APDPLHVLNLFGLLPFDPPSFLGIGVLAILLGITMWLQFKLQPAAMDPAQQQVFAFMPWI 533 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +F ++ F AGL+IYW SN+++I QQ + H Sbjct: 534 MMFVMAPFAAGLLIYWITSNLLTIAQQKYLYSRH 567 >gi|296283114|ref|ZP_06861112.1| putative inner membrane protein translocase component YidC [Citromicrobium bathyomarinum JL354] Length = 585 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 201/589 (34%), Positives = 319/589 (54%), Gaps = 15/589 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----NFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N +A+ L I++ ++ +Y P E + + + N A Sbjct: 1 MDNQRNLILAVVLCGILILGYEAAVTYYYPTPPETEQVDRATTAEQRVTQDTAQNPAIAA 60 Query: 57 LIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 D A +ALS RV + P + GSINL GA+ DD+ L+ + V +S V L + Sbjct: 61 AAIDEAVDLDEALSAGNRVAIDAPRVEGSINLVGAKIDDIELKDHRATVDKDSGPVQLFA 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 P+ T FA+ +V ++P ++TVW SG+ LTP TPI L + NA F + Sbjct: 121 PAGTPIQNFAQFGFVG--EGTQVPGADTVWQ-ASGEALTPDTPIDLRWDNAQGQRFRIRL 177 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 S+D++Y+ TV N + SP I R + +T+ G I G Sbjct: 178 SIDDNYMITAEQTVANTGDAPVVVSPFATITRTSLTASKSTWISHSGPIGTFGGTVDYGP 237 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 Y D+ + + + +WLG +D YW IP ++ + F+ L D ++A N Sbjct: 238 DYDDVVEQKVVSGAADPAWLGFTDIYWLGALIPEAGSAPDTGFRSLGDN--LFRADLIYN 295 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 T+ PG+ IT T+ LFAGAKE + Y+ D I +F + IDWGWF + KP+ L+ Sbjct: 296 PATLQPGRQITRTSRLFAGAKESGVLDAYQ-DAGIAQFGLAIDWGWFRWFEKPILWLLLQ 354 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +++VGNFG+AI+L T V+ L FP+A+K + S A+MK IQP++ +L+EK K Q Sbjct: 355 IFSVVGNFGVAIILLTCIVRGLMFPIAQKGFSSMASMKAIQPEMKKLQEKHKDDKV-TQQ 413 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M +L+K +NP+AGC P+LLQIPVFFA+YKV+ +++EMRH PF WI+DL+A DP + Sbjct: 414 QEMQKLFKERGVNPVAGCLPMLLQIPVFFALYKVLILAIEMRHQPFIFWIRDLSAPDPAH 473 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I LFG+LPF +PG + +G +++ +M++ +++P D Q + + MP V +F +S Sbjct: 474 ILNLFGMLPFEVPGMLALGPLALLLGFTMWLTFRLNPAAMDPVQQQVFSIMPWVMMFVMS 533 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 F AGL++YW+ SN++++ QQ + H ++ R+ + S+ Sbjct: 534 PFAAGLLLYWNTSNILTLAQQKYLYSKHPQLREAAEKERAEKAAKAQSE 582 >gi|167644608|ref|YP_001682271.1| putative inner membrane protein translocase component YidC [Caulobacter sp. K31] gi|254772764|sp|B0T872|OXAA_CAUSK RecName: Full=Inner membrane protein oxaA gi|167347038|gb|ABZ69773.1| 60 kDa inner membrane insertion protein [Caulobacter sp. K31] Length = 630 Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats. Identities = 216/626 (34%), Positives = 327/626 (52%), Gaps = 54/626 (8%) Query: 1 MER--NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-----RKNIQTVKQPNQV--DN 51 M+ N N + + + I+ +Q + P+ ++ E Q QP + Sbjct: 1 MQNDSNKNTLMFLVCAFAILIGYQFLVMGPQQKQREAELRAKKAAEAQVAVQPGMTIGAD 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 L R +A + SPR+ + P+L GSI LKGA+ DDL L+ Y NSP V L Sbjct: 61 GTPQPLKLSRDEAKAQSPRIAVDTPALSGSIALKGARIDDLWLKRYTQTADKNSPPVELF 120 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 P ++A+FA+ + A LP TVW G++L PTTP+ L + N ++F RT Sbjct: 121 RPEGAEHAWFADFGWAGIAGMTGLPTPQTVWTAAPGQVLRPTTPVVLTYDNGQGLVFTRT 180 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT-----NTFGVQEGFIAVLGD 226 IS+D +F + DTV N + +P + R T T V EG I VLG Sbjct: 181 ISVDADAMFTVADTVRNQGGAAVALAPYASVQRQGIPTEGPHGLGKTQIVYEGGIGVLGG 240 Query: 227 ------KSL---VEQKYSDIEKSS--ISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 + KY +K N W+G++DKYW + +P + +F Sbjct: 241 IDGVEGGKYILQNKAKYPKWKKDKPLQDNLQSKGGWIGMTDKYWLAALVPQQSEMIKGRF 300 Query: 276 KYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA-------- 326 + G Y++ F+ ++ G ++T T LFAGAK P + Y+ Sbjct: 301 QVKPVSGVDVYESAFTGAPKSLAAGATVTNTTRLFAGAKTVPLLTRYQYGGKPVVWWEFW 360 Query: 327 ------IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 IP F+ +DWG F I +P+F ++ FY +VGNFG+AIML TV +KL+ FPLA Sbjct: 361 NRPANVIPNFDKAVDWGMFEVITRPIFNVLEIFYKMVGNFGVAIMLLTVALKLILFPLAD 420 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 K Y S A MK I P++++L+ K K P + Q+ M+ LY INP+ GC P+L+QIP+F Sbjct: 421 KSYESMAKMKKIAPEVEKLKVKNKDDPAK-QQQEMMALYAKEKINPMMGCVPMLIQIPIF 479 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF----------YLPGFMHV 490 +++YKV+++++EMRHAPF+GWI DL+A DP+ LFG++ + +L G +H+ Sbjct: 480 YSLYKVLTVTIEMRHAPFFGWITDLSARDPSTFMNLFGLIHWDPATAPLIGAFLSGPLHI 539 Query: 491 GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 G+WP++ +M++ M+PP D Q I + P+VF F LS F GL+IYW WSNV++I Sbjct: 540 GVWPLLYGFTMWLTTAMNPPAGDPIQQKIFQFFPIVFTFTLSQFAVGLVIYWCWSNVLTI 599 Query: 551 VQQAVIMKMHGAEIG---LIDRLRST 573 +QQ +IM + + L++RLR Sbjct: 600 LQQYIIMHRYKVDNPIDQLVNRLRGK 625 >gi|330993393|ref|ZP_08317328.1| Inner membrane protein oxaA [Gluconacetobacter sp. SXCC-1] gi|329759423|gb|EGG75932.1| Inner membrane protein oxaA [Gluconacetobacter sp. SXCC-1] Length = 578 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 198/570 (34%), Positives = 322/570 (56%), Gaps = 25/570 (4%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 VA ALS +++ ++ F P+ E++ P + AA D+ Sbjct: 1 MVATALSAVVLVGFEYFL--PQQNHKTVEQQAPAPEAPPASTPVTAAAPSASDQPD---- 54 Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 PRV + + GS++L+GA+ DDL L+ YH V + SP+V +L P + E+ + Sbjct: 55 -PRVAIDADRVHGSLDLRGARLDDLVLKNYHETVQNGSPLVRVLEPRGQEQPNLVEVGWA 113 Query: 128 S-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTV 186 + + ++ +P++NT+W LT P+ L + N +F T+++D++Y+F + V Sbjct: 114 NVSGGHVAVPDANTLWT-ADHDSLTQARPVTLSWDNGQGQVFSITVAIDQNYMFSVTQKV 172 Query: 187 TNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 TN+ + + P R+ R T + V EG I+V+ D L E Y + K ++ + Sbjct: 173 TNHGGEPVSLYPFSRVERGYTPVETGGYLVHEGPISVI-DHRLDESSYKSLRKGAVPPGN 231 Query: 247 ------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR---YQAKFSA-NEITI 296 W GI+DKYW + IP +++ + Y G+ Y F+A + + Sbjct: 232 IAWTKAGQGGWAGITDKYWLAAVIPQQDSDVAGTYAYQGAGNGDKGTYDVGFTARAPLVV 291 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G +T + +FAGAKE P + YE L IP F +D+GWF F+ +P+F ++ + + Sbjct: 292 AAGGEASTASHVFAGAKEVPLLEKYESSLHIPDFWKAVDFGWFAFLTRPIFTVLDWLNTM 351 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GNFG+A+M T+ VK LFFPLA KQ+ S M+ +QPKI LRE++K L + MI Sbjct: 352 LGNFGLALMAFTLLVKALFFPLATKQFHSMGKMRQLQPKIKALRERYKDD-QMALNQQMI 410 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYK +NP +GC P+LLQIPVF+ +YK + +++EMRHAPF+GWI DL+A DPTN+FTL Sbjct: 411 GLYKQEGVNPASGCLPMLLQIPVFWCLYKDLYVTIEMRHAPFFGWIHDLSAFDPTNLFTL 470 Query: 477 FGILPF---YLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 FG++P+ + + +G+WPI L+MF QM+++P P AD Q + +MP++F F ++ Sbjct: 471 FGLIPWNPSVISPMLQLGLWPIAFGLTMFAQMRLNPTPTADPAQQKMFQFMPIIFTFFMA 530 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P+GL+IY+ W+N++++ QQ +I + Sbjct: 531 RQPSGLVIYYCWNNLLTMAQQTLIQRRMNK 560 >gi|297182643|gb|ADI18801.1| preprotein translocase subunit yidc [uncultured SAR11 cluster bacterium HF4000_37C10] Length = 560 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 206/563 (36%), Positives = 329/563 (58%), Gaps = 9/563 (1%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + N +AI LS +++ W F+ P +E E + ++ + + R Sbjct: 2 DSKNVLMAIVLSTLVLVFWATFFEPPPVERQIAEDQVTKSEELSSPSIEKVELSKKIARD 61 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 + RV+++N ++ GSI+L+GA DD+ + Y + S+ V L+P ++ Y+ Sbjct: 62 DTIDSVARVKIENNNIKGSISLQGAIIDDIIFKNYKESLESDQK-VIFLNPKSSDEGYYI 120 Query: 123 ELDYVSTANNI-ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 E + S +N +LP NT+W + K+LTP PI L + N ++F + I LD+ YLFK Sbjct: 121 ETGWASNSNEKLKLPLDNTIWKVKGNKVLTPNKPIVLEWDNNEGLIFTKKIELDDKYLFK 180 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 I + N S F P +I R+ + + EGFI + D+ ++++ + + Sbjct: 181 ISQGIKNTSNKSYEFFPYAQITRNYKPDVIPIYILHEGFIGMFDDE--LKEEDYEDVEDE 238 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP-GK 300 + S WLGI+DKYW + +P K F S+F + +Y+A F E T+L Sbjct: 239 KFIINSSKGWLGITDKYWLTAIVPEKGKKFKSEFLSID---GKYKANFIIKEATVLSSNA 295 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 SIT F AKE I Y + L I +F++ IDWGWFYFI KP+F ++ YF+ L GNF Sbjct: 296 SITNEINAFVMAKEVAVIDDYAEKLGIEKFDLTIDWGWFYFITKPLFFVIEYFFKLTGNF 355 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI++ T V+++FFPLA + S A MK +QP++ L+E K + LQ+ M+ LYK Sbjct: 356 GVAIIILTALVRIVFFPLANYSFRSMAKMKILQPEMIRLKELHKDDKTK-LQQEMMALYK 414 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP++GC P+L+QIP FFA+YK++ +++EMR PF+GWI+DL+A DPT+IF LFG++ Sbjct: 415 REKVNPVSGCLPVLIQIPFFFAVYKMLYVTIEMRQQPFFGWIQDLSARDPTSIFNLFGLI 474 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 P+ P F+ +G+WPI+M L+MF+Q K++P P D QA I ++P+ L+ FP+GL++ Sbjct: 475 PWDPPTFLMIGVWPILMGLTMFLQQKLNPTPPDPMQAKIFMFLPIFLTIILAPFPSGLVV 534 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW+ SNV+++ QQ VI++ + Sbjct: 535 YWTVSNVLTMAQQWVIIRGTKVK 557 >gi|148261132|ref|YP_001235259.1| 60 kDa inner membrane insertion protein [Acidiphilium cryptum JF-5] gi|326404533|ref|YP_004284615.1| inner membrane protein OxaA [Acidiphilium multivorum AIU301] gi|166975846|sp|A5G0F8|OXAA_ACICJ RecName: Full=Inner membrane protein oxaA gi|146402813|gb|ABQ31340.1| protein translocase subunit yidC [Acidiphilium cryptum JF-5] gi|325051395|dbj|BAJ81733.1| inner membrane protein OxaA [Acidiphilium multivorum AIU301] Length = 601 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 212/604 (35%), Positives = 321/604 (53%), Gaps = 35/604 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N +I++S++I+ +Q YV P ++ QP + Sbjct: 1 MD-NRRLLYSISISLVILVLFQVIASYVLPPPKKAPPHPATQTAQTQPVSGQPAPGVPAP 59 Query: 59 DDRAQA---------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 A + PR+ + P L GS++L GA+ DDL L YH V SP+V Sbjct: 60 SAVPPAAAPGGVAAKIPAGPRLAISTPLLRGSMSLVGARLDDLVLTRYHQTVKKTSPLVQ 119 Query: 110 LLSPSNTKNAYFAELDY-VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 LLS + T +Y+ + + + +++++P +TVW G L+P P+ L + N + F Sbjct: 120 LLSQAGTAKSYYVQFGWDAAPGSSLKVPGPDTVWTSSGGD-LSPAHPVTLSWNNGAGVTF 178 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 E +++D YLF + V N+ + P RI R +F + +G I V + Sbjct: 179 ELKLAVDRQYLFTVQQRVINHGAAAVEVYPWSRIRRDFLPEEPGSFTLHKGPIGVF-HGT 237 Query: 229 LVEQKYSDIEKSSISNFHES-----------NSWLGISDKYWASVFIPSKETSFHSQFKY 277 L E Y ++ W GI+ KYW + IPS+ ++Y Sbjct: 238 LHEMGYEGVKSGGKHPAAGDAPGTAYQTTNLGGWAGITGKYWLTALIPSQGREVIGAYRY 297 Query: 278 LSD----GHARYQAKF-SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 L+D H YQ + +A + PG + +TT +FAGAK + HYE IP FE Sbjct: 298 LADPGQPEHGGYQVDYMTAKPVDAAPGATASTTTHVFAGAKVLSILSHYETQYRIPLFER 357 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 ID+GWF+F+ KP+F+ + Y + GN G+AI++ T+ +KL+ FPL + Y S A M+ I Sbjct: 358 AIDFGWFFFLTKPIFIALDYLAGVFGNMGVAIIVFTIGLKLVLFPLVRTSYRSMARMRAI 417 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PK+ LRE++K Q QK ++ LYK +NP AGC P+L QIP+FF++YKVI IS+ Sbjct: 418 TPKVQALRERYKDDQMQ-QQKEIMALYKAEGVNPAAGCLPMLPQIPIFFSLYKVIFISIG 476 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFY---LPGFMHVGIWPIIMSLSMFIQMKMSP 509 MRHAPF WI DL+A DPTNIF LFG+LPF+ L F+H+GI PIIM ++M+ Q +++P Sbjct: 477 MRHAPFVLWIHDLSAEDPTNIFNLFGLLPFHPSALSPFLHLGILPIIMGITMWGQQRLNP 536 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 PP D QA ++ +MPV+F F L F AGL++Y+ +N ++I+QQ IM+ A Sbjct: 537 PPPDPTQAKMMQFMPVIFTFMLGRFAAGLVLYYCVNNTLTILQQWTIMRGTNAAPRAAAN 596 Query: 570 LRST 573 L + Sbjct: 597 LNAK 600 >gi|304322173|ref|YP_003855816.1| 60 kDa inner membrane insertion protein [Parvularcula bermudensis HTCC2503] gi|303301075|gb|ADM10674.1| 60 kDa inner membrane insertion protein [Parvularcula bermudensis HTCC2503] Length = 589 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 193/594 (32%), Positives = 329/594 (55%), Gaps = 24/594 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID- 59 M+ N +A+ LS ++++ ++ + P+ ++ Q + + Sbjct: 1 MD--RNVIIALVLSTLLLFGYEALVLGPKRAAYLEAQEKAQAIAAEQMDPADAGETFLPG 58 Query: 60 -----DRAQALSMSP-RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 R QAL+ R+ ++ P+L GS+NL+G FDDL L+ Y ++++SP + LLSP Sbjct: 59 TERSLSREQALAEGTARLPIETPTLSGSVNLEGLLFDDLILKTYRATLAADSPPIVLLSP 118 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 F + + W G +LTP TP+ + + + I + T++ Sbjct: 119 RTATTPQFMRAGLSIGG----VSDRTARWQAPEGAVLTPKTPVIVTRQEGD-IQYRATLA 173 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGR-IMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 +DE ++F++ VTN S + + P G R P N + EG I V+ D L+++ Sbjct: 174 VDEQFMFRVTYEVTNGSGETVVAQPYGAAYQRGIPADLQNFMILFEGPIGVV-DHRLMDR 232 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 KY + S W+GI+DKYW S IP ++T F ++ ++A + Sbjct: 233 KYKKLLSGGGIEDRGSGGWVGITDKYWLSAAIPPQDTPFKAELDVTDGAIPLFRASYLLE 292 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 +I PG +I T +L+ G+KE + Y+ L I RF +DWG F F+ +P+F ++++ Sbjct: 293 TQSIAPGATIRTEAYLYGGSKEVEVLRMYQDQLGIDRFVWAVDWGHFSFLTRPIFGILAF 352 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F L GN+G+AI+L T+ +K + FPLA Y S A MK +QP++ ++RE++ + Q Sbjct: 353 FEGLTGNWGVAILLLTLVIKAVLFPLANMSYKSMAGMKKVQPELMKIRERYTDDKTK-QQ 411 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+ LYK H INP AGC P+L Q+P+F+A+YK + +++E+RH P + +I DL+ DPT+ Sbjct: 412 QEMMALYKKHKINPAAGCLPVLAQMPIFYALYKTLFVTIELRHEP-FLYIPDLSEQDPTS 470 Query: 473 IFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 +F LFG+LPF + F+ +GI P++M +MF+Q+K++PPP D Q MI MP++ Sbjct: 471 VFNLFGLLPFDPTTVPLIGSFLGIGILPLLMGAAMFVQLKLNPPPPDPTQRMIFGLMPLI 530 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 F+F + F AGL++YW W+ +S++QQ +IMK GA++ ++ ++ +F K + Sbjct: 531 FMFIFAPFAAGLVLYWFWNTFLSVIQQYIIMKRQGADVDILGNIKQSFGKAPQA 584 >gi|71083172|ref|YP_265891.1| putative inner membrane protein translocase component YidC [Candidatus Pelagibacter ubique HTCC1062] gi|123647065|sp|Q4FNF1|OXAA_PELUB RecName: Full=Inner membrane protein oxaA gi|71062285|gb|AAZ21288.1| 60 kDa inner membrane protein [Candidatus Pelagibacter ubique HTCC1062] Length = 558 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 206/563 (36%), Positives = 330/563 (58%), Gaps = 10/563 (1%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID--D 60 N AI+LS ++ + F+ P + ++ + Sbjct: 2 DTRNVIAAISLSAAVIILYSLFF-QPDPATIKKNLAEQNKIENNEDTPSLDKNENFSKLS 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 RA AL + R++ +N S++GSI+LKGA DDL + Y+++++ N +TLLSP N ++ Y Sbjct: 61 RADALKENDRIQFENGSVVGSISLKGAAIDDLTFKEYNIELNRNEK-ITLLSPRNVEDGY 119 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E +VST NI++P+++TVW + LT P+KL + N I FE+ ISLD+ +LF Sbjct: 120 LIESGFVSTNKNIDIPDASTVWEVSGNNKLTNNNPVKLTWSNTQGITFEKHISLDDQFLF 179 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + + + N+S F G+I+R++ + + + EGF++VL D L+E+ Y DI+ Sbjct: 180 TVKEKIINSSDKSYNFYSYGQIIRNELPEISGFYILHEGFLSVL-DDELIEEDYDDIQDK 238 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 + + ++ ISDK+W + IP K F + F Y + A Y S I + Sbjct: 239 KFTQIA-QDGFVAISDKFWVTSVIPPKGKEFKTTFDYKNKFRANY---ISTKGIEVKANS 294 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 SI + AK I Y ++L I +F++ IDWG+ YFI KP+F ++ YF+ L+GN+ Sbjct: 295 SIEEKIQIIVAAKRVNVIDGYAENLNINKFDLAIDWGFMYFITKPLFFVLDYFFKLLGNY 354 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI+ T+ ++L FFPLA + S MK + P++ L+E K LQ+AM+ LYK Sbjct: 355 GLAIIAVTICIRLAFFPLANFSFKSMGKMKLLAPEMARLKELHKDDK-MKLQQAMMALYK 413 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP++GC PIL+QIPVFFA+YKV+ +++EMRH PF+GWI DL+ DPT++F +FG++ Sbjct: 414 KEKVNPMSGCLPILVQIPVFFALYKVLFVTIEMRHMPFYGWIHDLSDRDPTSLFNVFGLI 473 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 P+ P F+ +G WPIIM ++M+IQ K++P P D QA I + PV L+ FPAGL+I Sbjct: 474 PWDPPSFLLIGAWPIIMGITMWIQQKLNPTPPDPIQAKIFMFFPVFLTVILAPFPAGLVI 533 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YWS++N+ +++QQ ++ + + Sbjct: 534 YWSFNNIFTMIQQYIVQRKMTIK 556 >gi|91762399|ref|ZP_01264364.1| putative inner membrane protein translocase component YidC [Candidatus Pelagibacter ubique HTCC1002] gi|91718201|gb|EAS84851.1| putative inner membrane protein translocase component YidC [Candidatus Pelagibacter ubique HTCC1002] Length = 558 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 206/563 (36%), Positives = 330/563 (58%), Gaps = 10/563 (1%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID--D 60 N AI+LS ++ + F+ P + ++ + Sbjct: 2 DTRNVIAAISLSAAVIILYSLFF-QPDPATIKKNLAEQNKIENNEDTPSLDKNENFSKLS 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 RA AL + R++ +N S++GSI+LKGA DDL + Y+++++ N +TLLSP N ++ Y Sbjct: 61 RADALKENDRIQFENGSVVGSISLKGAAIDDLTFKEYNIELNRNEK-ITLLSPRNVEDGY 119 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E +VST NI++P+++TVW + LT P+KL + N I FE+ ISLD+ +LF Sbjct: 120 LIESGFVSTNKNIDIPDASTVWEVSGNNKLTNNNPVKLTWSNTQGITFEKHISLDDQFLF 179 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + + + N+S F G+I+R++ + + + EGF++VL D L+E+ Y DI+ Sbjct: 180 TVKEKIINSSDKSYNFYSYGQIIRNEIPEISGFYILHEGFLSVL-DDELIEEDYDDIQDK 238 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 + + ++ ISDK+W + IP K F + F Y + A Y S I + Sbjct: 239 KFTQIA-QDGFVAISDKFWVTSVIPPKGKEFKTTFDYKNKFRANY---ISTKGIEVKANS 294 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 SI + AK I Y ++L I +F++ IDWG+ YFI KP+F ++ YF+ L+GN+ Sbjct: 295 SIEEKIQIIVAAKRVNVIDGYAENLNINKFDLAIDWGFMYFITKPLFFVLDYFFKLLGNY 354 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI+ T+ ++L FFPLA + S MK + P++ L+E K LQ+AM+ LYK Sbjct: 355 GLAIIAVTICIRLAFFPLANFSFKSMGKMKLLAPEMARLKELHKDDK-MKLQQAMMALYK 413 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP++GC PIL+QIPVFFA+YKV+ +++EMRH PF+GWI DL+ DPT++F +FG++ Sbjct: 414 KEKVNPMSGCLPILVQIPVFFALYKVLFVTIEMRHMPFYGWIHDLSDRDPTSLFNVFGLI 473 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 P+ P F+ +G WPIIM ++M+IQ K++P P D QA I + PV L+ FPAGL+I Sbjct: 474 PWDPPSFLLIGAWPIIMGITMWIQQKLNPTPPDPIQAKIFMFFPVFLTVILAPFPAGLVI 533 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YWS++N+ +++QQ ++ + + Sbjct: 534 YWSFNNIFTMIQQYIVQRKMTIK 556 >gi|162147919|ref|YP_001602380.1| inner membrane protein oxaA [Gluconacetobacter diazotrophicus PAl 5] gi|161786496|emb|CAP56078.1| putative inner membrane protein oxaA [Gluconacetobacter diazotrophicus PAl 5] Length = 572 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 196/565 (34%), Positives = 316/565 (55%), Gaps = 21/565 (3%) Query: 31 EEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSP------RVELKNPSLIGSINL 84 ++ QT +Q D + A + + +P R+ + P + GSI+L Sbjct: 11 AHHEVAQQAAQTSRQTPPTDAARAPAPVAGASSQPVSTPAPQAETRLAIDAPKVAGSIDL 70 Query: 85 KGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWN 143 GA+ DD+ LR YH V+ SP V +L P + + + E+ +++ + +P++ TVW+ Sbjct: 71 LGARLDDMVLRDYHETVAKGSPQVRILEPGHDQQPNYVEIGWMNLPGGQVRVPDATTVWS 130 Query: 144 LISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM 203 LT P+ L + N + F+ +S+D HY+F I + N S + P R+ Sbjct: 131 -ADAPKLTSDRPVTLSWDNGAGVTFQIVVSIDAHYMFGIEQRIVNRSAQPVSLYPYARVD 189 Query: 204 RHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH------ESNSWLGISDK 257 R T T + V EG I+V+ D L E Y + + + W GI+DK Sbjct: 190 RAYTPTETGGYLVHEGPISVI-DGRLDESSYKSLRTGATPPGNLSWTKGGQGGWAGITDK 248 Query: 258 YWASVFIPSKETSFHSQFKYLSDGHA-RYQAKFSANEIT-ILPGKSITTTNFLFAGAKEF 315 YW + IP + T+ + Y ++G A YQ F A T + PG + T + +FAGAKE Sbjct: 249 YWLTAVIPQQGTAVTGSYGYQANGGAGVYQVGFIAQAATVVAPGTTGATVSHVFAGAKEV 308 Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 + Y+ L IP F +D+GWF F+ +P+F ++ + L+GNFG+A+M T+ VK LF Sbjct: 309 NLLEQYQSSLHIPDFWKAVDFGWFAFLTRPIFYVLDWLNTLLGNFGLALMAFTLLVKALF 368 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 FPLA +Q+ S A M+ +QPK+ ELRE++K L + M+ LYK +NP AGC P+++ Sbjct: 369 FPLATRQFRSMAKMRQLQPKVQELRERYKSD-QMALNQNMMALYKAEGVNPAAGCLPMVV 427 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF---YLPGFMHVGI 492 QIPVF+++YK + I++EMRHAPF+GWI DL+A D TN+F LFG++P+ L ++ +G+ Sbjct: 428 QIPVFWSLYKDLYITIEMRHAPFFGWIHDLSAPDLTNLFNLFGLIPWDPNVLSPYLQLGV 487 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 WPI+ +MF+Q K++P P D Q + MPV+F F ++ PAGL+IY+ W+N++++ Q Sbjct: 488 WPILFGATMFLQQKLNPAPTDPAQQRMFQMMPVLFTFFMARQPAGLVIYYCWNNLLTVAQ 547 Query: 553 QAVIMKMHGAEIGLIDRLRSTFSKN 577 Q VI + + + + + + + Sbjct: 548 QMVIQRRMKSAVDKVGAIPAAAGRK 572 >gi|254421078|ref|ZP_05034802.1| 60Kd inner membrane protein [Brevundimonas sp. BAL3] gi|196187255|gb|EDX82231.1| 60Kd inner membrane protein [Brevundimonas sp. BAL3] Length = 599 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 216/597 (36%), Positives = 335/597 (56%), Gaps = 25/597 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK-----QPNQVDNSYAAV 56 E + N + I S +I+ + + P+ E +++ + Sbjct: 4 ENSRNTIIFIVCSALILGVYWFAVLRPQAERRAVQQQAQAEQSQTAENAARTALSPQGPT 63 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + DR+QALS + RV +++ +L GS++L+G + DDL L Y P V L P Sbjct: 64 FVTDRSQALSTAARVPIQSGTLKGSLSLQGGRIDDLFLTDYKETQDKPEP-VELFRPQGM 122 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 +NAYFA+ + +P NTVW L +G LTPTTP+ L + N + F R +S+D+ Sbjct: 123 QNAYFAQFGWTGPNVVGGVPGPNTVWRLTAGSTLTPTTPVTLTWDNGQGLRFTRLVSVDD 182 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLG---DKSLVEQ 232 Y+F I+DTV N I +P G + R P A ++ V EG I G D ++ Sbjct: 183 RYVFSILDTVQNLGTQSITIAPYGSVQRQGVPPLAGSSHIVHEGAIGTFGKPGDYRTEQK 242 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSA 291 KY D K + WLGI+DKYW + +P + + ++F+ +G + +A Sbjct: 243 KYKDWLKEPRIENASTGGWLGITDKYWLAALLPQQNEAVETEFRVRDVNGGQQLEANILG 302 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 TI PG + T T LFAG K + YE+ L +PRF IDWG F+F+ +P+F ++ Sbjct: 303 AARTIQPGGTATETQRLFAGVKRAEVLKTYEETLHLPRFVYAIDWGMFWFLTRPIFWILE 362 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 Y LVG+FG+AI+ TV VKL+ FPLA Y S + M+N+QPK++E+++KFK P Q Sbjct: 363 NVYGLVGSFGVAILALTVIVKLVMFPLANNAYASMSKMRNLQPKMEEIKKKFKDDP-QKQ 421 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ + LY+ INP+AGC P++LQIPVF+A+YKV+++++EMRH PF G+I DL+A DP+ Sbjct: 422 QQETMALYQKEKINPVAGCLPLVLQIPVFYALYKVLTVTIEMRHQPFLGFIHDLSARDPS 481 Query: 472 NIFTLFGILPFYLPG----------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 ++ LFG++P+ + +G+ + L+M++Q M+PP AD Q I Sbjct: 482 VVWNLFGLIPWNPATLPLLGGLLVGPLGIGLLAVAYGLTMWLQTAMNPPAADPVQRQIFQ 541 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID---RLRSTFS 575 +MP+VF F ++ F AGL++YW+WSN+++I+QQ IM + AE + D R+R T + Sbjct: 542 FMPLVFTFIMAPFAAGLLVYWAWSNILTILQQYYIMHRYKAENPIDDFIARIRKTKA 598 >gi|329848429|ref|ZP_08263457.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain-containing protein [Asticcacaulis biprosthecum C19] gi|328843492|gb|EGF93061.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain-containing protein [Asticcacaulis biprosthecum C19] Length = 624 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 212/621 (34%), Positives = 332/621 (53%), Gaps = 44/621 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD------NSYAA 55 + N + S+++++ +Q F P+ ++ +R + A Sbjct: 6 QDTRNMIYFLIASMVLLFGYQYFVTGPQQKKAQEQRAVAAAQASASSSSAVAAGLPVTGA 65 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + R QA++ +PRV++ PSL GS++LKGA DDL L+ Y + SP V LL P+ Sbjct: 66 AAVMTREQAIAAAPRVKIDTPSLRGSLSLKGALVDDLYLKSYKETTKAGSPDVELLRPAG 125 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + AY+ + Y+ N LP++NT+WNL SG +L+P P+ L N ++F RT+S+D Sbjct: 126 SDRAYYVQSGYIG-QNIPGLPDANTMWNLQSGNVLSPGKPVVLTHDNGAGLMFTRTLSID 184 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAVLGDK------- 227 ++Y+ + + V N + FSP ++R P T V EG IA +K Sbjct: 185 DNYMITVAEAVANTGAGPVAFSPYSTVIRFDMPAGLDRTGVVHEGAIATFPNKIEAGKID 244 Query: 228 --SLVEQKYSDIEKSS----ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK-YLSD 280 KY D+ K + W G++DKYW + IP+++ + + + Sbjct: 245 RYKTQSLKYKDMAKEPEKKVFKDVASVGGWFGLTDKYWMAAVIPAQDQPVRFTTQANVQN 304 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y+A + +T+ PG++ + + +FAGAK + YE DL IPRF DWG Sbjct: 305 NKPIYRAGYLDETVTVAPGQTWQSQSHIFAGAKLNSQLQAYENDLKIPRFGYATDWGSLQ 364 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----PKI 396 F+ PM+ L+ Y +GNFG AI+ TV VK++F+PLA K Y S MK +Q PK+ Sbjct: 365 FLTYPMYWLLDKLYGFLGNFGFAILALTVIVKIVFYPLAHKAYESMTKMKQVQDRLKPKL 424 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPL---AGCWPILLQIPVFFAIYKVISISLEM 453 D ++ +F P Q Q+A ++LY+ +NP+ GC P+LLQIPVF+A+YKV+ +++EM Sbjct: 425 DAIKSRFPDDP-QKQQEATMKLYQDEKVNPMAGLGGCLPMLLQIPVFWALYKVLILAIEM 483 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPF----------YLPGFMHVGIWPIIMSLSMFI 503 RHAPF+GWIKDL+A DPT+ LFG+LPF L G +H+G+ I+ LSM++ Sbjct: 484 RHAPFFGWIKDLSAPDPTSFVNLFGLLPFEPATVPLIGGILAGPLHLGVVAILYGLSMWL 543 Query: 504 QMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +M+P D Q +L +MPV+ F ++ GLIIYW WSN+++I QQ IM Sbjct: 544 SQQMTPTANVDPMQKKMLAFMPVILTFFMAQVAVGLIIYWIWSNILTIFQQWTIMHRLKV 603 Query: 563 EIGL---IDRLRSTFSKNYNS 580 E + I ++R+ + + Sbjct: 604 ENPIDTGIGKVRALLDRKKAA 624 >gi|296775679|gb|ADH42956.1| preprotein translocase subunit YidC [uncultured SAR11 cluster alpha proteobacterium H17925_23J24] Length = 569 Score = 501 bits (1291), Expect = e-139, Method: Composition-based stats. Identities = 213/573 (37%), Positives = 330/573 (57%), Gaps = 19/573 (3%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV-----LID 59 N AIALS +++ W + P+IEE ++ K+ D V I Sbjct: 4 RNVIFAIALSFAVLFGWSVIFETPKIEEQAKLEQSENYQKEDAASDAPSVNVEKKDLPIV 63 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 R A+ + R+ +N +++GSI LKGA DD+ + Y+ + S+ VT L+P T Sbjct: 64 SRNDAIKSTNRINFENENVVGSITLKGALIDDITFKKYNETLGSDKK-VTYLNPQETNEG 122 Query: 120 YFAELDYVSTA-NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YF E + ++ +I LPN +T+W + L+ +P+ + +KN + I F + I LD + Sbjct: 123 YFIETGWAASNVEDIGLPNKDTLWKVKGNNKLSTGSPVIMEWKNKSGITFRKKIELDSKF 182 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ-----TATNTFGVQEGFIAVLGDKSLVEQK 233 LF++ + N S + P +I R++ + + T + +GFI V + +++ Sbjct: 183 LFRVTQEIQNKSGSIVELYPYAQITRNQKPVLQAGSMSGTLILHDGFIGVFNED--LKEY 240 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN- 292 D K + + WLGI+DK+W + +P K SF +F Y S+ ++A + AN Sbjct: 241 DYDDIKDKKKEHNAESGWLGITDKFWITALVPEKNQSFRGEFVYKSES---FKANYIANK 297 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 I + P S +T +F AKE I Y + +I +F++ IDWGW YF+ KP+F +++Y Sbjct: 298 PIVVQPSSSKASTTKIFVAAKEVKVIDGYAEAESINKFDLTIDWGWLYFLTKPLFFIINY 357 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + L NFGIAI+L T V+LLFFPLA + S A MK +QP++ L+E K + LQ Sbjct: 358 LFELTKNFGIAIILVTAAVRLLFFPLANYSFRSMAKMKILQPELLRLKEVHKGDKVK-LQ 416 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+ LY+ +NPL+GC PIL+QIP FFAIYK++ ISLEMRH PF+GWIKDL+A DPT+ Sbjct: 417 QEMMALYRREKVNPLSGCLPILIQIPFFFAIYKMLLISLEMRHQPFFGWIKDLSAQDPTS 476 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 IF +FG++P+ P F+ +G WPI+M +M++Q K++P P D QA I + P+ L+ Sbjct: 477 IFNIFGLIPWDPPSFLIIGAWPIMMGATMYLQQKLNPTPPDPIQAKIFLFFPLFLTIILA 536 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 FPAGL++YW+ +NV++I QQ VIMK + Sbjct: 537 PFPAGLVVYWTINNVLTIAQQWVIMKRTTVKTK 569 >gi|85709448|ref|ZP_01040513.1| putative inner membrane protein translocase component YidC [Erythrobacter sp. NAP1] gi|85688158|gb|EAQ28162.1| putative inner membrane protein translocase component YidC [Erythrobacter sp. NAP1] Length = 595 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 195/576 (33%), Positives = 302/576 (52%), Gaps = 25/576 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDN------- 51 M+ N +A+ LS +++ +W Y YP+ + P D Sbjct: 1 MDNQRNILLAVVLSGLLILSWDMGMRYFYPQSDVPAPSEVMSGAASDPADADTVTSSTDG 60 Query: 52 -------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + A V D AL+ RV + P + GSINL GA+ DDL L+ Y Sbjct: 61 PAGDLGEAAAEVGPVDLGTALASENRVIIDAPRVAGSINLVGARVDDLVLKDYDETTQEG 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 S V +L+P T ++AE +V + +S +W G+ LTP TP+ L + N Sbjct: 121 SDPVRILAPDRTDEQHYAEFGFVVGGQRM---SSRAIWE-ADGERLTPETPVTLSRTDEN 176 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 I + S+D++Y+ TV N S + P I R + + F G V Sbjct: 177 GITYRVAFSIDDNYMVSAQQTVENGSENAAIVQPFALIKRTSETASPDQFIAHAGPTGVF 236 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 G Y ++ + N + SWLG +D YWAS IP + + + ++ L D Sbjct: 237 GGSLYDPNSYEELAELGRDNPAGAVSWLGFTDNYWASALIPGEGEADSAGWRSLGD--QL 294 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 ++A + T+ G S+T LFAGAKE + Y +D I F I WGWF + K Sbjct: 295 FRADLIYDAQTVPAGGSLTRGTQLFAGAKESAILDQY-EDAGITYFGKAISWGWFEWFEK 353 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+ L+ LVGNFG+AI+L TV ++ L FP+A+KQ+ S A MK +QPK+ ++E++K Sbjct: 354 PLLWLLRTLNGLVGNFGVAIILLTVIIRGLLFPIAQKQFASMAQMKAVQPKMKAIQERYK 413 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q Q+ +++LYK +NPLAGC P+L+QIP+FFA+YKV+ +++EMRH P + ++ D Sbjct: 414 DDK-QTQQQKIMELYKEEKVNPLAGCLPLLIQIPIFFALYKVLYLAIEMRHEP-FLYMSD 471 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DP I LFG+LP+ +PGF+ +GI +++ ++M++ K++P D Q I N MP Sbjct: 472 LSAPDPAKILNLFGLLPYDVPGFLGIGILAVLLGVTMWLTFKLNPSAMDPVQQQIFNLMP 531 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +F ++ F AGL+IYW SNV+++ QQ+ + H Sbjct: 532 WFLMFVMAPFAAGLLIYWVTSNVLTLAQQSYLYSRH 567 >gi|332186329|ref|ZP_08388074.1| Inner membrane protein translocase component YidC, long form [Sphingomonas sp. S17] gi|332013697|gb|EGI55757.1| Inner membrane protein translocase component YidC, long form [Sphingomonas sp. S17] Length = 565 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 194/562 (34%), Positives = 311/562 (55%), Gaps = 11/562 (1%) Query: 2 ERNWNYFVAIALSVIIVYAW---QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 E N+ V ++ +I++ W Q+ + V + I Sbjct: 3 EDRKNFVVFAVIAALILFGWPLIQSKFFPSNPPATKIVDGKQVPVANSTANPTATTPSAI 62 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 DR L+ +PRV + P L GSINLKGA+ DDL L Y V+ +SP + LLSP+ + Sbjct: 63 RDRRVVLAETPRVAIDTPRLKGSINLKGARIDDLVLLDYKETVAKDSPPIRLLSPAGAEG 122 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 AYFA + + + + P ++TVW S +L P P+ L NA F+ T+S+D+ Y Sbjct: 123 AYFAGFGWRT--DGLNPPAADTVWT-ASAPVLRPGQPVTLTAANATGQRFQITLSVDKDY 179 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +F + TV N + + G + R +++ + G ++V + + D++ Sbjct: 180 MFTVQQTVANGGNAPVPVAAYGYVNR-GISADPDSWTIHVGPMSVNDGTAHYGPNWKDLD 238 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 K+ + F + WLG +DKYW + IP + +F QF+ + YQA ++ T+ P Sbjct: 239 KAP-TRFTTTGGWLGFTDKYWLATLIPDQSKAFDGQFR--AGAGQTYQADYTLQPQTLAP 295 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G+ +T T FAGAKE + Y + + +DWG+ + KP+F + + + LVG Sbjct: 296 GRQVTQTTRFFAGAKEVALLDRYTDKEGATKLDYALDWGYLRVLEKPIFYYLDWLFRLVG 355 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 NFG+AI+L TV ++ L FP+A++Q+ S A M+ +QPK+ L+E++K + +Q+ ++ L Sbjct: 356 NFGVAIILLTVTIRALMFPIAQRQFASMAAMRAVQPKMKALQERYKDDKVR-MQQEVMAL 414 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NPLAGC P L+QIP+F+A+YKV+ +++EMRH PF WIKDL+A DP LFG Sbjct: 415 YKQEKVNPLAGCLPTLIQIPIFYALYKVLMLTIEMRHQPFVAWIKDLSAPDPLTPVNLFG 474 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 +LPF P F+ +G+ PI++ +SM+ Q KM+P P D Q + +P V +F ++ F GL Sbjct: 475 LLPFTPPHFIAIGVVPILLGISMYFQFKMNPQPMDDAQKQVFAILPWVLMFVMAPFAVGL 534 Query: 539 IIYWSWSNVISIVQQAVIMKMH 560 +YW +N ISI+QQ ++ H Sbjct: 535 QVYWITTNCISILQQRLLYARH 556 >gi|291615646|ref|YP_003518388.1| YidC [Pantoea ananatis LMG 20103] gi|291150676|gb|ADD75260.1| YidC [Pantoea ananatis LMG 20103] gi|327395912|dbj|BAK13334.1| preprotein translocase subunit YidC [Pantoea ananatis AJ13355] Length = 548 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 154/589 (26%), Positives = 260/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ L S +I AWQ + ++ Q Q NS A Sbjct: 1 MDSQRNLFLIAFLFVSFMIWQAWQTDHAPKPLQT------------QTTQNTNSAAGDAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + +K L +IN +G D L Y + S+ P L + Sbjct: 49 GQGVPASGQGKTITVKTDVLSLTINTRGGDVDQAQLLTYPDKLGSDKPFELL--ETTPSF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ NN P NT + + + F N +++ +T Sbjct: 107 VYQAQSGLTGRNGPDNPNNGARPLYNTAQDHFELAEGQSELRVPMTFTAENGVVYTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + + N S + S G++ + T +N F + G Sbjct: 167 FKRGDYAVNVDYNINNTSQQPLELSMFGQLKQTIDLPKHRDTGSNNFALHTFRGTAYSTS 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + K+ I + N SN W+ + +Y+A+ ++P + + L +G A Sbjct: 227 ESKYEKIKFDTIADNENLNTTTSNGWVAMLQQYFATAWVPRTQGTNTLYTSNLGNGVA-- 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +T+ PG T L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSAPVTVAPGAQQTLDATLWVGPEIQDKMAAI-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKFIHSFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL Sbjct: 400 DK-QKQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFILWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGITMFFIQKMSPTTVTDPMQQKIMTYMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 547 >gi|149186358|ref|ZP_01864671.1| putative inner membrane protein translocase component YidC [Erythrobacter sp. SD-21] gi|148829947|gb|EDL48385.1| putative inner membrane protein translocase component YidC [Erythrobacter sp. SD-21] Length = 579 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 186/565 (32%), Positives = 307/565 (54%), Gaps = 14/565 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQ--NFYVYPRIEEMNNERKNIQTVKQPNQVDNSY---AA 55 ME + N+ + + LS+ ++ WQ + YP+ + + + + T + + +A Sbjct: 1 MENSRNFVLVLTLSLAVLIGWQWAMDHFYPQPDNVPVTAETVDTPAEAAAAASGEIGESA 60 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 D +L + R+ + +P + GSI + GA DD+ L+ Y +S V + +P Sbjct: 61 ATSVDLESSLGAAERIRIDSPKVAGSIAVGGAMIDDIVLKDYAASPDGDSEPVRIFAPRG 120 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 T +A+ ++ I S+ V G L+ P+ L N +L E+T S+D Sbjct: 121 TDVQQYAQFGFLVNGAKI----SDDVLWESDGDTLSVGNPVTLRHDAGNGVLLEQTYSID 176 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 E+Y+ + V+N + I P G + R + + F G I G YS Sbjct: 177 ENYMITVEQAVSNRGENGIVAQPFGLVGRTSTTMSDDFFIAHSGPIGSFGQAVEYGYDYS 236 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D+E+ + + WLG +D YW + +P T + F+ L G Y+A + + Sbjct: 237 DVEEERKVSPSGTTDWLGFTDIYWLAALVPQAGTDPDATFRSL--GGDLYRADMIYDPVR 294 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G+ +TTT+ LFAGAK+ + Y+ D IP+F + IDWGWF + KP L+ + Sbjct: 295 VEAGRKVTTTSRLFAGAKDSEILDAYQ-DAGIPQFGLAIDWGWFRWFEKPFLWLLKNIFA 353 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 LVGNFG+AI++ T+ V+ L FP+A+KQ+ S A MK IQPK+ +L+E+ K + Q+ M Sbjct: 354 LVGNFGVAIIILTIIVRGLMFPIAQKQFASMAAMKAIQPKMKKLQERHKDDKVK-QQQEM 412 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +L+K +NPLAGC P++LQIP+FFA+YKV+ +++EMRH + WI+DL+A DP I Sbjct: 413 QKLFKEEQVNPLAGCLPLILQIPIFFALYKVLYLAIEMRH-QNFLWIEDLSAPDPATILN 471 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+LPF P F+ +GI +++ ++M++ K++P D Q + + MP V +F ++ F Sbjct: 472 LFGLLPFTPPSFLAIGILAVLLGVTMWLTFKLNPSAMDPVQQQVFSIMPWVLMFIMAPFA 531 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 AGL++YW SNV+++ QQ + H Sbjct: 532 AGLLLYWVTSNVLTLAQQKYLYSKH 556 >gi|88607700|ref|YP_505133.1| putative inner membrane protein translocase component YidC [Anaplasma phagocytophilum HZ] gi|88598763|gb|ABD44233.1| inner membrane protein, 60 kDa [Anaplasma phagocytophilum HZ] Length = 568 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 192/567 (33%), Positives = 307/567 (54%), Gaps = 21/567 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ SV I+ W+ Y + E P D V Sbjct: 1 MSEVRNLILAVVASVAIMLGWKYIYGEFFAVKTVPEGVQESESLIPEVDD----IVDYAS 56 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + AL PRVELKN L S++L+GA DD +L Y + + NS V L+SP T + Sbjct: 57 YSDALKQVPRVELKNSKLAASVSLRGALIDDASLVKYRVSLDKNSENVLLMSPEGTVSDS 116 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E +V + +++P +TVW L G + + + N ++F S+D+ Y+ Sbjct: 117 MVEFGWVDPKHVLKVPGRDTVWALEDG---SDEQNFTIRWDNGEGLIFRLKFSVDQDYML 173 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK- 239 + V NN+ + + GRI R +++ + + EG I G L E Y ++E+ Sbjct: 174 TVAQEVINNTDVNVHLAHYGRINRAHSKSSKSFWISHEGAIGSFG-HGLKEWTYKNLEEA 232 Query: 240 -----SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS---DGHARYQAKFSA 291 S ++ SW+G +DKYW + IPS F+ +G +R+Q +S Sbjct: 233 GSIRLSGVTREDGGRSWIGFADKYWFTALIPSASEQGKLAFRTQRVYREGASRFQVDYSK 292 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + TI + LF GAKE + Y+ L IP F+ +D+G YFI KP+F+L+ Sbjct: 293 SHGTIGAHDKVEAVTHLFMGAKELELLDQYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQ 352 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 YF+ L+GNFG+AI++ TV +KL+ FPL+ + YVS +K +QP++ ++E +K + + Sbjct: 353 YFHKLLGNFGLAIVMLTVAIKLVAFPLSMRSYVSMFKLKRLQPEVLRIKELYKTDDLR-I 411 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 K + L+K H ++PL+G P+L+QIP+FFA+YKV+ +++EMRHAP +GWI+DL++ D Sbjct: 412 SKEIASLFKKHKVSPLSGFLPVLIQIPIFFALYKVLFVTIEMRHAPLFGWIRDLSSQDTA 471 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPADKGQAMILNWMPVVFVFA 530 N LFG++P P +G+ P+++ L+M +Q K M A + ++ ++P +FVF Sbjct: 472 NFLNLFGLIPLEPP--FCIGVLPVVLGLTMVLQQKVMQKDQATPDRYGVMKFLPYIFVFV 529 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIM 557 SSFP+GL++YW SNVI+I+QQ VI Sbjct: 530 FSSFPSGLVLYWICSNVITILQQIVIR 556 >gi|212712607|ref|ZP_03320735.1| hypothetical protein PROVALCAL_03702 [Providencia alcalifaciens DSM 30120] gi|212684823|gb|EEB44351.1| hypothetical protein PROVALCAL_03702 [Providencia alcalifaciens DSM 30120] Length = 553 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 153/591 (25%), Positives = 271/591 (45%), Gaps = 54/591 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + +E + + Q P+ N AV + Sbjct: 1 MDSQRNLLL-IALLFVSFLVWQAWESDKVAQETKAVQVSQQKTDMPSSASNDGQAVTGSE 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L IN +G D+ +L Y ++S P L + Y Sbjct: 60 ------QGKLIAVKTDVLDIRINTRGGDIDEADLLAYPATLNSPDPFRLL--ETTPGFVY 111 Query: 121 FAELDYVST-------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + NN + P + K I + F + N +++++T Sbjct: 112 QAQSGLIGPHGPDNPANNNGQRPLYTSDATSFELKDGQDELRIPMTFTDNNGVVYQKTYI 171 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227 L Y + + N + + + G++ + + T ++ F + A Sbjct: 172 LKRGKYTVDVEYNIQNPTAQPLTLAFFGQLKQTIALPEQRDTGSSNFALHTYRGAAYSSD 231 Query: 228 S--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + +SDIE ++S W+ + +Y+A+ +IP+ S F + Sbjct: 232 ENNYKKYSFSDIEDKNLS-LTTKGGWVAMLQQYFATAWIPASSE--QSTFYTIDLDKKSA 288 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI + T ++ L+ G + + P ++ +D+GW +FI++P Sbjct: 289 IVGYKSEPLTIASNGAATYSSTLWVGPEIQSEMAEV-----APHLDLTVDYGWLWFISQP 343 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + + VGN+GIAI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 344 LFKLLKFIHGFVGNWGIAIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGD 403 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK+ +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF+GWI+DL Sbjct: 404 DK-QRMSQEMMALYKSEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFFGWIQDL 462 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I P++M ++MF+ KMSP D Q I+ +MP Sbjct: 463 SAQDPYYIL-------------------PVLMGVTMFVIQKMSPTTVTDPMQQKIMMYMP 503 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 VVF FP+GL++Y+ SN+++I+QQ VI + + GL R + Sbjct: 504 VVFTVFFLWFPSGLVLYYIVSNLVTIIQQQVIYR-GLEKRGLHSRDKKEKK 553 >gi|271502719|ref|YP_003335745.1| membrane protein insertase, YidC/Oxa1 family domain containing [Dickeya dadantii Ech586] gi|270346274|gb|ACZ79039.1| membrane protein insertase, YidC/Oxa1 family domain containing [Dickeya dadantii Ech586] Length = 543 Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats. Identities = 154/586 (26%), Positives = 261/586 (44%), Gaps = 57/586 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + E N QT +Q N A + Sbjct: 1 MDSQRNLLV-IALLFVTFMIWQQW------ETDKNPPATTQTTQQANGAVGDAA----NQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G ++ +L Y ++ SN P L S Y Sbjct: 50 GVPASGQGKLITVKTDVLSLNINTRGGDIEEADLLAYPAELGSNQPFKLL--ESTPAFTY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N S I L + +AN + F +T L Sbjct: 108 QAQSGLTGKNGPDNPANGARPLYTASADRFELAAGQNELRIPLTYTDANGVSFTKTFVLK 167 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG--DK 227 Y + +V N S + + G++ + T +N F + A D Sbjct: 168 RGEYALNVEYSVNNTSAQPLELTLFGQLKQSIDLPSHRDTGSNNFALHTYRGAAFSSSDD 227 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + +SD++++ N + W+ + +Y+A+ ++P+ S F + G+ Sbjct: 228 KYRKYSFSDMKEN--LNINTQGGWVAMLQQYFATAWVPNAAASNT--FYSANLGNGLAAI 283 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F + + + PG L+ G + + P ++ +D+GW +FI++P+F Sbjct: 284 GFKSPSVVVQPGSQQNLNATLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLF 338 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 339 KLLKFLHGFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK 398 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYKT +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 399 -QRMSQEMMALYKTEKVNPLGGCFPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 457 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP + PI+M L+MF KMSP D Q I+ +MPV+ Sbjct: 458 QDPYYVL-------------------PILMGLTMFFIQKMSPTTVTDPMQQKIMTYMPVI 498 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 F FP+GL++Y+ SN+++I QQ +I + + GL R + Sbjct: 499 FTVFFLWFPSGLVLYYIVSNLVTIAQQQLIYR-GLEKRGLHSREKK 543 >gi|261346746|ref|ZP_05974390.1| membrane protein insertase, YidC/Oxa1 family [Providencia rustigianii DSM 4541] gi|282565146|gb|EFB70681.1| membrane protein insertase, YidC/Oxa1 family [Providencia rustigianii DSM 4541] Length = 550 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 151/591 (25%), Positives = 277/591 (46%), Gaps = 57/591 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + +++ E K +QT +Q + NS + + Sbjct: 1 MDSQRNLLL-IALLFVTFLVWQAW----ESDKVAQETKTVQTSQQKTDMPNSDGQAVTNS 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L IN +G D+ +L Y ++S P L + Y Sbjct: 56 E-----QGKLIAVKTDVLDVRINTRGGDIDEADLLAYPATLNSPDPFRLL--ETTPGFVY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-------PTTPIKLVFKNANNILFERTIS 173 A+ + N+N L + + + + F + N +++++T Sbjct: 109 QAQSGLIGPHGPDNPANNNGQRPLYTADSASFELQAGQDELRVPMSFTDNNGVVYQKTYI 168 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227 L Y ++ ++ N + + + G++ + + T +N F + A Sbjct: 169 LKRGKYTVEVEYSIQNPTAQPLSLAFFGQLKQTIALPEQRDTGSNNFALHTYRGAAYSSD 228 Query: 228 S--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + +SDIE ++S W+ + +Y+A+ ++P E + S F + Sbjct: 229 ENNYKKYSFSDIEDKNLS-LTTKGGWVAMLQQYFATAWVP--EATEQSTFYTIDLDKKSA 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI + T ++ L+ G + + P ++ +D+GW +FI++P Sbjct: 286 IVGYKSEPVTIAANGAGTYSSTLWIGPEIQSEMAEV-----APHLDLTVDYGWLWFISQP 340 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + + VGN+GIAI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 341 LFKLLKFIHGFVGNWGIAIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGD 400 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ +YK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF+GWI+DL Sbjct: 401 DK-QRMSQEMMAMYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFFGWIQDL 459 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I P++M ++MF+ KMSP D Q I+ +MP Sbjct: 460 SAQDPYYIL-------------------PVLMGVTMFVIQKMSPTAVTDPMQQKIMTYMP 500 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 VVF FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 501 VVFTVFFLWFPSGLVLYYIVSNLVTIIQQQIIYR-GLEKRGLHSRDKKEKK 550 >gi|254293247|ref|YP_003059270.1| hypothetical protein Hbal_0879 [Hirschia baltica ATCC 49814] gi|254041778|gb|ACT58573.1| 60 kDa inner membrane insertion protein [Hirschia baltica ATCC 49814] Length = 600 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 204/596 (34%), Positives = 331/596 (55%), Gaps = 26/596 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYAA 55 + ++ + I L + ++ Q F P+ + R I + ++ A+ Sbjct: 6 QDQKSFMIGIGLVLCVMALSQFFIWGPQQKAQEQARLEAQAQAAIAAPSVSSGSVDTTAS 65 Query: 56 VLIDDRAQALSM---SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 DRA+ L+ R++ S+ GSI+LKGA+ DDL+++ + + + V LLS Sbjct: 66 AAPVDRAEILTDTSNGGRIDFDASSVDGSISLKGARLDDLSMKRHFETIEK-TEEVHLLS 124 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 P +K AY+A L + A+ LP +T+W +G LTP+TPI L ++ + F R I Sbjct: 125 PQGSKGAYYAALGWRGDADR--LPGVSTLWKQTAGSTLTPSTPITLGYETTQ-LSFSRKI 181 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVE 231 +D++Y+F DTVTNNS + + P G + + P + + EG + + L Sbjct: 182 EVDDNYMFTYTDTVTNNSSETLSIRPFGFMRQFGMPDDWKPFYILHEGAVG-MAGNKLKL 240 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG-HARYQAKFS 290 QKY +++K + W+G++ KYW + FIP++ + Q K + DG Y A Sbjct: 241 QKYKNLDKGKALAYTSQGGWIGLTQKYWMTAFIPAQTENVAVQSKVVMDGLRPTYVASIE 300 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL----AIPRFEMLIDWGWFYFIAKPM 346 + I PG++ + + +FAGAK + Y++ AIPRF +DWG F+F KP Sbjct: 301 GTDRAIEPGQTASYSQRIFAGAKRVEVLDAYQQGATGQEAIPRFTDAVDWGNFWFFTKPF 360 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+S+F + GNFG+AI+ TV VKL FFP+ K Y S A M+ + P+++E+++K+ Sbjct: 361 FWLLSHFNSWFGNFGLAILALTVIVKLAFFPIQNKAYASMAKMRKLMPQMEEIKKKWADD 420 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + QK ++LYK NP +GC P++ Q+ VF+ +YK + ++LEMRH PF+GWIKDL+ Sbjct: 421 K-ERQQKETMELYKREKANPFSGCLPLIPQMFVFYGLYKTLFVTLEMRHEPFFGWIKDLS 479 Query: 467 AADPTNIFTLFGILPFY-----LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 A DPT+ LFG LPF L G + +G+ PI+ +M++ ++ PP D Q M++ Sbjct: 480 APDPTSFLNLFGALPFDPSSLPLIGALSIGVLPILYGFTMWLLQNLNAPPPDPTQRMMMQ 539 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 ++P+VF F + F AGL+IYW+WSN++SI QQ IM+ +G E +++ F K+ Sbjct: 540 FLPIVFTFIFAGFAAGLVIYWTWSNILSIAQQYYIMRKNGVETQFDKFIKAKFGKS 595 >gi|268593484|ref|ZP_06127705.1| membrane protein insertase, YidC/Oxa1 family [Providencia rettgeri DSM 1131] gi|291310905|gb|EFE51358.1| membrane protein insertase, YidC/Oxa1 family [Providencia rettgeri DSM 1131] Length = 549 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 155/591 (26%), Positives = 278/591 (47%), Gaps = 58/591 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + +++ + K +QT +Q + + AV Sbjct: 1 MDSQRNLLL-IALLFVSFLVWQAW----ESDKVAQDVKTVQTSQQADMPSSDAQAVTGS- 54 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L IN +G D+ +L Y + S SP L +N Y Sbjct: 55 -----GQGKLITVKTDVLDIRINTRGGDIDEADLLAYPATLHSESPFRLL--ETNPGFVY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTP-------IKLVFKNANNILFERTIS 173 A+ + N+N L S T T + + F + N +++++T Sbjct: 108 QAQSGLIGLHGPDNPANNNGERPLYSADSTTFTLEKGQDVLRVPMTFTDNNGVVYQKTYI 167 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227 + Y ++ ++ N + + + G++ + + T ++ F + A Sbjct: 168 VKRGQYTVEVEYSIQNPTAQPLSLAFFGQLKQTIELPKERDTGSSNFALHTYRGAAYSSD 227 Query: 228 SLVEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 +KYS DIE ++ + W+ + +Y+A+ +IP+ S F + Sbjct: 228 ENNYKKYSFGDIEDKNL-DLTTKGGWVAMLQQYFATAWIPASAEK--STFYTIDLDKKSA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI + T ++ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 IIGYKSEPMTIAANGAGTYSSTLWVGPEIQSEMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + + VGN+GIAI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 340 LFKLLKFIHGFVGNWGIAIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ +YK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF+GWI+DL Sbjct: 400 DK-QRMSQEMMAMYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFFGWIQDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I P++M ++MF+ KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PVLMGVTMFVIQKMSPTAVTDPMQQKIMTYMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 VVF FP+GL++Y+ SN+++I+QQ VI + + GL R + Sbjct: 500 VVFTIFFLWFPSGLVLYYIVSNLVTIIQQQVIYR-GLEKRGLHSRDKKEKK 549 >gi|68171979|ref|ZP_00545283.1| 60 kDa inner membrane protein [Ehrlichia chaffeensis str. Sapulpa] gi|67998597|gb|EAM85346.1| 60 kDa inner membrane protein [Ehrlichia chaffeensis str. Sapulpa] Length = 585 Score = 488 bits (1256), Expect = e-135, Method: Composition-based stats. Identities = 216/587 (36%), Positives = 332/587 (56%), Gaps = 23/587 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ LSV+I+ W+ Y + E P DN + Sbjct: 7 MVEVRNLILAVILSVLIMMGWRFIYDKFFTTQHAIEDNTSSDAMIPEIDDN----FIHKT 62 Query: 61 RAQALSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R++ + + R++L N + GSI+LKGAQFDDL + YH+ NS + LLSP T+N Sbjct: 63 RSEVIESNTNIRIKLSNEKMNGSISLKGAQFDDLIFKNYHVTPDKNSEGIVLLSPEETEN 122 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YF E ++ + I +P +++WN L+P PI L + N ++F+ I+LD Y Sbjct: 123 VYFIEFGWIDPQHKITVPTHSSIWNSDQ-STLSPNNPITLTWDNKQGVVFKIKITLDNDY 181 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +FKI VTNN+ I P GRI R K + + EG + G +L E Y I Sbjct: 182 MFKIEQMVTNNTDSIINLIPYGRINRSKHTAEKSYWISHEGAVGSFG-NTLKEWTYKAIT 240 Query: 239 KSSISNF------HESNSWLGISDKYWASVFIP--SKETSFHSQFKYLS-DGHARYQAKF 289 K N W+GI DKYW + IP S++++ + K+ + R+Q F Sbjct: 241 KEKNIKIQQQDINDNQNQWIGIGDKYWFTALIPNVSQKSNLNFHVKHAKHNSKDRFQVDF 300 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 S + P ++T+ N+LFAGAKE + Y+ +L I F+ +D+G YFI KP+F+L Sbjct: 301 SHDNYIAHPNNTVTSINYLFAGAKELKLLDTYKDNLNISLFDKAVDFGVLYFITKPVFLL 360 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + YF N++GNFG+AI+L T+ +KL+ FPL+ K YVS ++++QP I ++E +K + Sbjct: 361 LEYFNNVIGNFGLAILLLTIVIKLIMFPLSHKSYVSMLKLRHLQPDIVRIKELYKNDNDK 420 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + K + ++K +N+NP++G P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL++ D Sbjct: 421 -MSKEISAIFKKNNVNPMSGFVPVLIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLSSFD 479 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPVV 526 NI T+FG+L F P + +GI P+I+ ++M IQ K++ DK QA + ++P + Sbjct: 480 TANILTIFGLLKFNPP--ICIGILPVILGITMIIQQKLNNHSSLNQDKTQANFMKFLPYI 537 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F+F SSFPAGLIIYW SN I+IVQQ +I + ++ Sbjct: 538 FIFIFSSFPAGLIIYWICSNSITIVQQLIIKHYVTKKFNFYKTVQQE 584 >gi|317494663|ref|ZP_07953075.1| membrane protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917265|gb|EFV38612.1| membrane protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 544 Score = 488 bits (1256), Expect = e-135, Method: Composition-based stats. Identities = 150/587 (25%), Positives = 262/587 (44%), Gaps = 62/587 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S +I AWQ NN + QT Q N+ A Sbjct: 4 QRNLLLIALLFVSFMIWQAWQTD---------NNPQPTAQTA---GQTANTTTADASSQA 51 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + +K L +IN +G + NL Y + S+ P L + Y Sbjct: 52 VPESGQGKLITVKTDVLSLTINTRGGDIEQANLLAYPATLGSDKPFELL--ETTPDFIYQ 109 Query: 122 AELDYVS--------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + T + L++G+ I L + + +++ +T Sbjct: 110 AQSGLTGKNGPDNPANGDRPLYTADQTNFELVNGQ---DELRIPLTYTAKDGVVYTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227 L Y + V N+S + + G++ + T ++ F + A Sbjct: 167 LKRGDYAIGVDYKVKNSSAQPLDLTLFGQLKQSIDLPKHRDTGSSNFALHTFRGAAYSSS 226 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 QKY+ +K + N W+ + +Y+A+ +IP T+ +QF + G+ Sbjct: 227 DDKYQKYA-FDKDPL-NITTKGGWVAMLQQYFATAWIPQ--TNSTNQFYTANLGNGLSAI 282 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F + + PG L+ G + + P ++ +D+GW +FI++P+F Sbjct: 283 GFKGEPVVVAPGTEKNLNATLWVGPEIQSDMAAV-----APHLDLTVDYGWLWFISQPLF 337 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 338 KLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERIGDDK 397 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+R APF WI DLAA Sbjct: 398 -QRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRQAPFALWIHDLAA 456 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 457 QDPYYIL-------------------PILMGITMFFIQKMSPTTVTDPMQQKIMTFMPVI 497 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 498 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 543 >gi|307133251|ref|YP_003885267.1| cytoplasmic insertase into membrane protein, Sec system [Dickeya dadantii 3937] gi|306530780|gb|ADN00711.1| cytoplasmic insertase into membrane protein, Sec system [Dickeya dadantii 3937] Length = 543 Score = 488 bits (1256), Expect = e-135, Method: Composition-based stats. Identities = 150/586 (25%), Positives = 260/586 (44%), Gaps = 57/586 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E N QT +Q N A + Sbjct: 1 MDSQRNLLL-IALLFVTFMIWQQW------ETDKNPPAATQTTQQANGAVGDAA----NQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G ++ +L Y ++ S+ P L + Y Sbjct: 50 GVPASGQGKLITVKTDVLSLNINTRGGDIEEADLLAYPAELGSSQPFKLL--ETTPAFTY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + I L + +AN + F +T L Sbjct: 108 QAQSGLTGKNGPDNPANGSRPLYTAPADRFELAAGQNELRIPLTYTDANGVSFTKTFVLK 167 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG--DK 227 Y + V N S + + G++ + T +N F + A D Sbjct: 168 RGEYALNVEYGVNNASAQPLELTLFGQLKQSIDLPSHRDTGSNNFALHTYRGAAFSSSDD 227 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + +SD++++ N W+ + +Y+A+ ++P+ + ++ F + G+ Sbjct: 228 KYRKYSFSDMKEN--LNITTQGGWVAMLQQYFATAWVPA--AAGNNTFYSANLGNGLAAI 283 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F A + + PG L+ G + + P ++ +D+GW +FI++P+F Sbjct: 284 GFKAPPVIVQPGSQQNLNATLWVGPEIQDKMATV-----APHLDLTVDYGWLWFISQPLF 338 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 339 KLLKFLHGFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK 398 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 399 -QRMSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 457 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP + PI+M L+MF KMSP D Q I+ +MPV+ Sbjct: 458 QDPYYVL-------------------PILMGLTMFFIQKMSPTTVTDPMQQKIMTYMPVI 498 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 F FP+GL++Y+ SN+++I QQ +I + + GL R + Sbjct: 499 FTVFFLWFPSGLVLYYIVSNLVTIAQQQLIYR-GLEKRGLHSREKK 543 >gi|269140892|ref|YP_003297593.1| 60 kDa inner membrane insertion protein [Edwardsiella tarda EIB202] gi|267986553|gb|ACY86382.1| 60 kDa inner membrane insertion protein [Edwardsiella tarda EIB202] gi|304560650|gb|ADM43314.1| OxaI/YidC membrane insertion protein [Edwardsiella tarda FL6-60] Length = 541 Score = 487 bits (1255), Expect = e-135, Method: Composition-based stats. Identities = 157/591 (26%), Positives = 268/591 (45%), Gaps = 69/591 (11%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ + +S +I AWQ NN + QT Q S A Sbjct: 1 MDSQRNLFLVALLFVSFLIWQAWQTD---------NNPQPVAQTAGQSVSDTASQA---- 47 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + +K L +IN +G + +L Y + SN+P L + + Sbjct: 48 ---VPESGQGKLITVKTDVLALTINTRGGDIEQADLLAYPATLGSNTPFQLL--ETTPQF 102 Query: 119 AYFAELDYVSTANNIELPNS--------NTVWNLISGKILTPTTPIKLVFKNANNILFER 170 Y A+ + N T + ++ G+ I L + AN +++ + Sbjct: 103 VYQAQSGLTGKSGPDNPANGARPLYSANQTSYEMLPGQ---DELRIPLTYTAANGVIYTK 159 Query: 171 TISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIA 222 T L + Y + V N+S D + + G++ + T +N F + G Sbjct: 160 TFVLKRNDYAIAVDYKVKNDSHDALDLTLFGQLKQSVDLPKHRDTGSNNFALHTFRGAAY 219 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 D + +SDIE ++ N W+ + +Y+A+ +IP L +G Sbjct: 220 SSSDDKYQKYSFSDIEDKNL-NVQTKGGWVAMLQQYFATAWIPHDSGVNTFYTANLGNGQ 278 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 A + A +++ P + L+ G + + P ++ +D+GW +FI Sbjct: 279 A--AIGYKAPSVSVAPNTEKVLSTTLWVGPELQSDMAAV-----APHLDLTVDYGWLWFI 331 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 ++P+F L+ ++ VGN+G AI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 332 SQPLFKLLQLIHSFVGNWGFAIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRER 391 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q + + M+ LYK+ +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI Sbjct: 392 IGDDK-QRMSQEMMALYKSEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWI 450 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521 DLAA DP I PI+M ++MF KMSP D Q I+ Sbjct: 451 HDLAAPDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMT 491 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 +MPV+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 492 FMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSRDKK 541 >gi|294638332|ref|ZP_06716585.1| membrane protein insertase, YidC/Oxa1 family [Edwardsiella tarda ATCC 23685] gi|291088585|gb|EFE21146.1| membrane protein insertase, YidC/Oxa1 family [Edwardsiella tarda ATCC 23685] Length = 555 Score = 487 bits (1255), Expect = e-135, Method: Composition-based stats. Identities = 153/591 (25%), Positives = 266/591 (45%), Gaps = 69/591 (11%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ + +S +I AWQ + N + QT Q S A Sbjct: 15 MDSQRNLFLVALLFVSFLIWQAWQTDH---------NPQPVAQTAGQSVSDAASQA---- 61 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + +K L +IN +G + +L Y + SN+P L + + Sbjct: 62 ---VPESGQGKLITVKTDVLALTINTRGGDIEQADLLAYPATLGSNTPFQLL--ETTPQF 116 Query: 119 AYFAELDYVSTANNIELPNS--------NTVWNLISGKILTPTTPIKLVFKNANNILFER 170 Y A+ + N T + ++ G+ I L + N +++ + Sbjct: 117 IYQAQSGLTGKSGPDNPANGPRPLYNANQTSYEMLPGQ---DELRIPLTYTAPNGVVYTK 173 Query: 171 TISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIA 222 T L + Y + V N+S + + + G++ + T ++ F + G Sbjct: 174 TFVLKRNDYAIAVDYKVKNDSHEALDLTLFGQLKQSVDLPKHRDTGSSNFALHTFRGAAY 233 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 D + +SDIE ++ N W+ + +Y+A+ +IP L +G Sbjct: 234 SSSDDKYQKYSFSDIEDKNL-NVQTKGGWVAMLQQYFATAWIPHDSGVNTFYTANLGNGQ 292 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 A + A +++ P + L+ G + + P ++ +D+GW +FI Sbjct: 293 A--AIGYKAPSVSVAPNTEQVLSTTLWVGPELQSDMAAV-----APHLDLTVDYGWLWFI 345 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 ++P+F L+ ++ VGN+G AI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 346 SQPLFKLLQLIHSFVGNWGFAIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRER 405 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI Sbjct: 406 IGDDK-QRMSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWI 464 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521 DLAA DP I PI+M ++MF KMSP D Q I+ Sbjct: 465 HDLAAPDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMT 505 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 +MPV+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 506 FMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSRDKK 555 >gi|317050194|ref|YP_004117842.1| membrane protein insertase, YidC/Oxa1 family domain containing [Pantoea sp. At-9b] gi|316951811|gb|ADU71286.1| membrane protein insertase, YidC/Oxa1 family domain containing [Pantoea sp. At-9b] Length = 548 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 151/589 (25%), Positives = 258/589 (43%), Gaps = 58/589 (9%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ L S +I AWQ + Q Q NS A Sbjct: 1 MDSQRNLFLIAFLFVSFMIWQAWQTDH------------APQPQQTQTTQTTNSTAGDAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + +K L +IN +G + +L Y + S++P L + Sbjct: 49 TSGVPGSGQGKTITVKTDVLSLNINTRGGDIEQASLLTYPDKLGSDAPFQLL--ETTPAF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ NN P T + + L + N +++ +T Sbjct: 107 IYQAQSGLTGRNGPDNPNNGARPLFTTTQDHFEMAEGQTELRVPLTWTGENGVVYTKTFV 166 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 + + + N S + + G++ + T +N F + G Sbjct: 167 FKRGEFAVNVDYNINNASQQPLEVAMFGQLKQTIEVPKHRDTGSNNFALHTFRGAAYSTS 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D + K+ I + N SN W+ + +Y+A+ ++P E + L +G A Sbjct: 227 DAKYEKYKFDTINDNENLNTTTSNGWVAMLQQYFATAWVPRTEGTNTLYTSNLGNGVA-- 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI PG L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSAPVTIAPGAQQNLGATLWVGPEIQDKMAAI-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL Sbjct: 400 DK-QKMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFILWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I P+IM ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PVIMGITMFFIQKMSPTTVTDPMQQKIMTYMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 547 >gi|262166780|ref|ZP_06034517.1| OxaI/YidC membrane insertion protein [Vibrio mimicus VM223] gi|262026496|gb|EEY45164.1| OxaI/YidC membrane insertion protein [Vibrio mimicus VM223] Length = 541 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 146/571 (25%), Positives = 256/571 (44%), Gaps = 43/571 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A++ + + + + L SI+ G L Y ++ S+ P V L + + + Sbjct: 60 ---AVAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYSEELDSSEPFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ AN I + +T L Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVNADSFSLAEGQDELRIPMTYQ-ANGIDYTKTFILKR 173 Query: 177 -HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKY 234 Y +V V NNS + + ++ + N G D + + Sbjct: 174 GSYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSF 233 Query: 235 SDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D++ ++S ++ + +W+ + Y+AS +IP E + +++ Sbjct: 234 DDMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPN 290 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 TI G L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 291 KTIANGDKAEFEATLWVGPKLQDQMAAV-----APNLDLVVDYGWLWFIAKPLHWLLSFI 345 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 QSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMSQ 404 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP I Sbjct: 405 EMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYI 464 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 465 L-------------------PLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFL 505 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 506 WFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|262172772|ref|ZP_06040450.1| OxaI/YidC membrane insertion protein [Vibrio mimicus MB-451] gi|261893848|gb|EEY39834.1| OxaI/YidC membrane insertion protein [Vibrio mimicus MB-451] Length = 541 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 146/571 (25%), Positives = 255/571 (44%), Gaps = 43/571 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + + + + L SI+ G L Y ++ S+ P V L + + + Sbjct: 60 ---AAAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYSEELDSSEPFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ AN I + +T L Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVNADSFSLAEGQDELRIPMTYQ-ANGIDYTKTFILKR 173 Query: 177 -HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKY 234 Y +V V NNS + + ++ + N G D + + Sbjct: 174 GSYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSF 233 Query: 235 SDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D++ ++S ++ + +W+ + Y+AS +IP E + +++ Sbjct: 234 DDMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPN 290 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 TI G L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 291 KTIANGDKAEFEATLWVGPKLQDQMAAV-----APNLDLVVDYGWLWFIAKPLHWLLSFI 345 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 QSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMSQ 404 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP I Sbjct: 405 EMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYI 464 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 465 L-------------------PLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFL 505 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 506 WFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|251791812|ref|YP_003006533.1| putative inner membrane protein translocase component YidC [Dickeya zeae Ech1591] gi|247540433|gb|ACT09054.1| 60 kDa inner membrane insertion protein [Dickeya zeae Ech1591] Length = 543 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 151/584 (25%), Positives = 259/584 (44%), Gaps = 53/584 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E N QT Q+ NS + Sbjct: 1 MDSQRNLLL-IALLFVTFMIWQQW------ETDKNPPAATQTT----QLANSAVGDAANQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G ++ +L Y ++SS+ P L + Y Sbjct: 50 GVPASGQGKLITVKTDVLSLNINTRGGDIEEADLLAYPAELSSSQPFKLL--ETTPAFTY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + S I L + +AN + F +T L Sbjct: 108 QAQSGLTGKNGPDNPANGSRPLYTASADRFELPAGQNELRIPLTYTDANGVSFTKTFVLK 167 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 Y + +V N S + + G++ + T +N F + A Sbjct: 168 RGEYALNVEYSVNNASAQPLELALFGQLKQSIDLPSHRDTGSNNFALHTYRGAAFSSSED 227 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS + N + W+ + +Y+A+ ++P + ++ F + G+ F Sbjct: 228 KYRKYSFSDMKENLNINTQGGWVAMLQQYFATAWVP--TAAANNTFYSANLGNGLAAIGF 285 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 A + + PG L+ G + + P ++ +D+GW +FI++P+F L Sbjct: 286 KAAPVIVQPGSQQNLNATLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLFKL 340 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 341 LKFLHGFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK-Q 399 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 400 RMSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P + PI+M L+MF KMSP D Q I+ +MPV+F Sbjct: 460 PYYVL-------------------PILMGLTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 500 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 FP+GL++Y+ SN+++I QQ +I + + GL R + Sbjct: 501 VFFLWFPSGLVLYYIVSNLVTIAQQQMIYR-GLEKRGLHSREKK 543 >gi|262402088|ref|ZP_06078652.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC586] gi|262351734|gb|EEZ00866.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC586] Length = 541 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 146/571 (25%), Positives = 255/571 (44%), Gaps = 43/571 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPTPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + + + + L SI+ G L Y ++ S+ P V L + + + Sbjct: 60 ---AAAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYSEELDSSEPFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ AN I + +T L Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVNADSFSLAEGQDELRIPMTYQ-ANGIEYTKTFILKR 173 Query: 177 -HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKY 234 Y +V V NNS + + ++ + N G D + + Sbjct: 174 GSYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSF 233 Query: 235 SDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D++ ++S ++ + +W+ + Y+AS +IP E + +++ Sbjct: 234 DDMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPN 290 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 TI G L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 291 KTIANGDKAEFEATLWVGPKLQDQMAAV-----APNLDLVVDYGWLWFIAKPLHWLLSFI 345 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 QSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMSQ 404 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP I Sbjct: 405 EMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYI 464 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 465 L-------------------PLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFL 505 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 506 WFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|88658314|ref|YP_507580.1| putative inner membrane protein translocase component YidC [Ehrlichia chaffeensis str. Arkansas] gi|88599771|gb|ABD45240.1| inner-membrane protein, 60 kDa [Ehrlichia chaffeensis str. Arkansas] Length = 579 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 216/587 (36%), Positives = 332/587 (56%), Gaps = 23/587 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ LSV+I+ W+ Y + E P DN + Sbjct: 1 MVEVRNLILAVILSVLIMMGWRFIYDKFFTTQHAIEDNTSSDAMIPEIDDN----FIHKT 56 Query: 61 RAQALSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R++ + + R++L N + GSI+LKGAQFDDL + YH+ NS + LLSP T+N Sbjct: 57 RSEVIESNTNIRIKLSNEKMNGSISLKGAQFDDLIFKNYHVTPDKNSEGIVLLSPEETEN 116 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YF E ++ + I +P +++WN L+P PI L + N ++F+ I+LD Y Sbjct: 117 VYFIEFGWIDPQHKITVPTHSSIWNSDQ-STLSPNNPITLTWDNKQGVVFKIKITLDNDY 175 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +FKI VTNN+ I P GRI R K + + EG + G +L E Y I Sbjct: 176 MFKIEQMVTNNTDSIINLIPYGRINRSKHTAEKSYWISHEGAVGSFG-NTLKEWTYKAIT 234 Query: 239 KSSISNF------HESNSWLGISDKYWASVFIP--SKETSFHSQFKYLS-DGHARYQAKF 289 K N W+GI DKYW + IP S++++ + K+ + R+Q F Sbjct: 235 KEKNIKIQQQDINDNQNQWIGIGDKYWFTALIPNVSQKSNLNFHVKHAKHNSKDRFQVDF 294 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 S + P ++T+ N+LFAGAKE + Y+ +L I F+ +D+G YFI KP+F+L Sbjct: 295 SHDNYIAHPNNTVTSINYLFAGAKELKLLDTYKDNLNISLFDKAVDFGVLYFITKPVFLL 354 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + YF N++GNFG+AI+L T+ +KL+ FPL+ K YVS ++++QP I ++E +K + Sbjct: 355 LEYFNNVIGNFGLAILLLTIVIKLIMFPLSHKSYVSMLKLRHLQPDIVRIKELYKNDNDK 414 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + K + ++K +N+NP++G P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL++ D Sbjct: 415 -MSKEISAIFKKNNVNPMSGFVPVLIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLSSFD 473 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPVV 526 NI T+FG+L F P + +GI P+I+ ++M IQ K++ DK QA + ++P + Sbjct: 474 TANILTIFGLLKFNPP--ICIGILPVILGITMIIQQKLNNHSSLNQDKTQANFMKFLPYI 531 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F+F SSFPAGLIIYW SN I+IVQQ +I + ++ Sbjct: 532 FIFIFSSFPAGLIIYWICSNSITIVQQLIIKHYVTKKFNFYKTVQQE 578 >gi|148284763|ref|YP_001248853.1| putative inner membrane protein translocase component YidC [Orientia tsutsugamushi str. Boryong] gi|146740202|emb|CAM80485.1| 60 kD inner-membrane protein, preprotein translocase subunit [Orientia tsutsugamushi str. Boryong] Length = 567 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 215/568 (37%), Positives = 336/568 (59%), Gaps = 11/568 (1%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI---QTVKQPNQVDNSYAAVLI 58 + N +AI LS+ I+ W FY PR+ +M+N +K NQ +A+ I Sbjct: 4 DNRLNLILAITLSLAIILGWHFFYEKPRLIKMSNAQKEKIEYNKRSSTNQYLLHESALKI 63 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D+ + S RV++ L GSI+LKG +FDDL L GY DV NSP V LLSPS T Sbjct: 64 KDKVDIIDYSTRVKIMTNKLHGSISLKGLRFDDLILVGYKQDVLENSPDVELLSPSETAT 123 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 AYFAE+ + N + + PNS+T+W IL + N +N+ F ++S+D++ Sbjct: 124 AYFAEVGWYCAKNADSDFPNSDTLWQ-TDKSILQANDTTTFTWTNKHNVQFIVSVSIDDN 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+F I ++ NNS Q+ G I R+ + N+ + +G IA + D L E Y+ + Sbjct: 183 YMFTINQSIVNNSKQQLAVQFHGLIHRNLAENE-NSANIFQGPIASI-DSYLNEVTYNKL 240 Query: 238 -EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 EK I WLGISDKYW + FIP + + + F Y G +YQ F + + + Sbjct: 241 KEKKHIDYNLNVVHWLGISDKYWLTSFIPDVKYRYSTSFMYGKAGFEKYQVSFLSPKEVV 300 Query: 297 -LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 G S++ + LF GAKE + +Y + I F+ ID+GWFY + KP+F +S+FY Sbjct: 301 NSDGGSLSVVHHLFLGAKEVKLLDYYAEKYNIKLFDRAIDFGWFYILTKPLFYTLSFFYK 360 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 GNFG++I++ T+ +K++ F + + Y S M+++QP+I L+E + + L + + Sbjct: 361 YCGNFGVSILIVTILIKIMMFSFSNRSYSSMKKMRDLQPRIQRLQELYGDDKIK-LHQEI 419 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LYK ++ L+Q+P+FF++YKV+ +++EMRHAPF WIKDL+A DPT IF Sbjct: 420 MALYKKEKVSLAGSFLQSLIQLPIFFSLYKVLHVTIEMRHAPFLSWIKDLSALDPTCIFN 479 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534 LFG+LPF++PGF+++G P++ S +M +Q K++P P AD QA +L +MP++ + ++F Sbjct: 480 LFGLLPFHVPGFLNIGALPVLTSATMILQQKINPAPTADPAQAQVLKFMPLILLIVFNNF 539 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGA 562 PAGL+IYW+W+N++SIVQQ +I K++ Sbjct: 540 PAGLLIYWTWNNILSIVQQFIINKINNK 567 >gi|238921764|ref|YP_002935279.1| inner membrane protein translocase component YidC [Edwardsiella ictaluri 93-146] gi|259515692|sp|C5BF61|OXAA_EDWI9 RecName: Full=Inner membrane protein oxaA gi|238871333|gb|ACR71044.1| inner membrane protein OxaA [Edwardsiella ictaluri 93-146] Length = 541 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 155/591 (26%), Positives = 270/591 (45%), Gaps = 69/591 (11%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ + +S +I AWQ + N + QT Q S A Sbjct: 1 MDSQRNLFLVALLFVSFLIWQAWQTDH---------NPQPVAQTAGQSISDTASQA---- 47 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + +K L +IN +G + +L Y + S++P L + + Sbjct: 48 ---VPESGQGKLITVKTDVLALTINTRGGDIEQADLLAYPATLGSDTPFQLL--ETTPQF 102 Query: 119 AYFAELDYVSTANNIELPNS--------NTVWNLISGKILTPTTPIKLVFKNANNILFER 170 Y A+ + N T + ++ G+ I L + AN +++ + Sbjct: 103 VYQAQSGLTGKSGPDNPANGARPLYSANQTSYEMLPGQ---DELRIPLTYTAANGVIYTK 159 Query: 171 TISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIA 222 T L + Y + V N+S D + + G++ + T +N F + G Sbjct: 160 TFVLKRNDYAIAVDYKVKNDSHDALDLTLFGQLKQSVDLPKHRDTGSNNFALHTFRGAAY 219 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 D + +SDIE ++ N W+ + +Y+A+ +IP + F + G+ Sbjct: 220 SSSDDKYQKYSFSDIEDKNL-NVQTKGGWVAMLQQYFATAWIPHDSG--VNTFYSANLGN 276 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 + + A +++ P + L+ G + + P ++ +D+GW +FI Sbjct: 277 GQAAIGYKAPSVSVAPNTEKVLSTTLWVGPELQSDMAAV-----APHLDLTVDYGWLWFI 331 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 ++P+F L+ ++ VGN+G AI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 332 SQPLFKLLQLIHSFVGNWGFAIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRER 391 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q + + M+ LYKT +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI Sbjct: 392 IGDDK-QRMSQEMMALYKTEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWI 450 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521 DLAA DP I PI+M ++MF KMSP D Q I+ Sbjct: 451 HDLAAPDPFYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMT 491 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 +MPV+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 492 FMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSRDKK 541 >gi|219871547|ref|YP_002475922.1| putative inner membrane protein translocase component YidC [Haemophilus parasuis SH0165] gi|254772790|sp|B8F6M2|OXAA_HAEPS RecName: Full=Inner membrane protein oxaA gi|219691751|gb|ACL32974.1| putative inner membrane protein translocase component YidC [Haemophilus parasuis SH0165] Length = 546 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 157/583 (26%), Positives = 282/583 (48%), Gaps = 48/583 (8%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M N + + + +S +I WQ Y P I+ QT + NQ + A+ Sbjct: 1 MNSNRSLLIMGLLLVSFLIFTQWQQDYN-PEIQAQKQAMAQAQTQQVANQSSDVPASSNA 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + ++ L +++ G D +L Y+ ++ SN+P L N K Sbjct: 60 ASINEQSTKGKTITIETDVLRLTVDTLGGDVVDSDLLKYNAELDSNTPFELL--QDNGKV 117 Query: 119 AYFAELDYVS------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ V TA + + + L G+ + L F+ + +++ +T Sbjct: 118 LYVAQSGLVGKNGIDTTAGRAQYQATAEKFALAEGQ---DEIALPLTFE-KDGVVYTKTF 173 Query: 173 SLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGDKSLV 230 +L Y + + N + + + P G++ ++ N G + + Sbjct: 174 TLKRGSYNVAVNYHIKNGTAETLEVQPYGQLKHTLVESTGNFAMPTYTGGAYSSSEVNYK 233 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + ++ K+++S W + Y+ S +IP+++ + + G+ + Sbjct: 234 KYSFDEMAKANLS-VDTKAGWAAVLQHYFVSAWIPNQDAENNLYTRT---GNGVGTIGYR 289 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + P T T+ L+ G K+ + + F++ +D+GW +FIAKP+F L+ Sbjct: 290 GPVTQVAPNGEATITSHLWTGPKDQAAMAQVANN-----FDLTVDYGWAWFIAKPLFWLL 344 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++ ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QP+I E+RE+F Q Sbjct: 345 TFIQSIVSNWGLAIIGVTIVVKTILYPLTKAQYTSMAKMRMLQPRIQEMRERFGDD-RQR 403 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M++LYK +NP+ GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 404 MSQEMMKLYKEEKVNPMGGCLPILLQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDP 463 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 IF P++M SM++ KMSP P AD Q ++N+MPV+F Sbjct: 464 YYIF-------------------PLLMGGSMYLLQKMSPTPIADPVQQKVMNFMPVMFTV 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 FP+GL++YW SN+I+I QQ +I + + + GL R++ Sbjct: 505 FFLWFPSGLVLYWLTSNLITIAQQWLIYR-NLEKKGLHTRVKK 546 >gi|270264115|ref|ZP_06192382.1| putative inner membrane protein translocase component YidC [Serratia odorifera 4Rx13] gi|270041764|gb|EFA14861.1| putative inner membrane protein translocase component YidC [Serratia odorifera 4Rx13] Length = 545 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 147/590 (24%), Positives = 256/590 (43%), Gaps = 63/590 (10%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ + +S +I AWQ N + QT +Q N+ Sbjct: 1 MDSQRNLFLIALLFVSFMIWQAWQTD---------NAPQPVAQTTQQ---TSNTATGDAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + + L +IN +G + L Y + S++P L + Sbjct: 49 SQAVPASGQGKLITVNTDVLSLTINTRGGDIEQAKLLAYPDTLGSSTPFQLL--ENTPSF 106 Query: 119 AYFAELDYVS--------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 Y A+ + + L G+ I L F + ++ + Sbjct: 107 VYQAQSGLTGRNGPDNPANGERPLFQAAQDNYTLPEGQ---DELRIPLTFTGKDGAVYTK 163 Query: 171 TISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVL 224 T L + Y + V N S + + G++ + T +N F + A Sbjct: 164 TFVLKRNHYAVGVDYNVDNKSTAPLELTLFGQLKQTTELPKHRDTGSNNFALHTFRGAAY 223 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 QKY+ +K N W+ + +Y+A+ ++P+ + S F G Sbjct: 224 SSSEDKYQKYA-FDKDENLNVTTQGGWVAMLQQYFATAWVPATQGSNT--FYTAKPGDNL 280 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 F + + + PG L+ G + + P ++ +D+GW +FI++ Sbjct: 281 STIGFKSTPVVVQPGAQQQLNATLWVGPELQDQMAQL-----APHLDLTVDYGWLWFISQ 335 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 336 PLFKLLKFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIG 395 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI D Sbjct: 396 DDK-QRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHD 454 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+A DP I PI+M ++MF KMSP D Q I+ +M Sbjct: 455 LSAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFM 495 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 PV+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 496 PVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 544 >gi|311281728|ref|YP_003943959.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Enterobacter cloacae SCF1] gi|308750923|gb|ADO50675.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Enterobacter cloacae SCF1] Length = 547 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 149/587 (25%), Positives = 261/587 (44%), Gaps = 55/587 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 50 GVPASGQGKLITVKTDVLDLTINTRGGDVEQAELLAYPKELGSNEPFQLL--ETTPQFIY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ N + I L + + F +T L Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYSVDKDTFVLADGQNEISIPLTWTDKAGNTFTKTFVLK 167 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQE--GFIAVLGDK 227 Y + +V N+S + S G++ + T ++ F + G D Sbjct: 168 RGEYAVNVDYSVKNSSDKPLEISTFGQLKQSINLPTHRDTGSSNFALHTFRGAAYSTPDA 227 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N + W+ + +Y+A+ ++P + + + F + G+ Sbjct: 228 KYEKYKFDTIADNENLNVSAKDGWVAMLQQYFATAWVPRNDGTNN--FYTANLGNGIAAI 285 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + I PG++ T + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 286 GYKSQPTLIQPGQTGTVGSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLF 340 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 KLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 400 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 401 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 459 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 460 QDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 500 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 501 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 546 >gi|227113120|ref|ZP_03826776.1| putative inner membrane protein translocase component YidC [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227328549|ref|ZP_03832573.1| putative inner membrane protein translocase component YidC [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 544 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 146/584 (25%), Positives = 259/584 (44%), Gaps = 52/584 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E N Q ++Q N+ + Sbjct: 1 MDSQRNLLL-IALLFVTFMLWQAW------ETDKNPPATTQAIQQ---ATNAVTGDATNQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + +L Y + S+ P L + ++ Y Sbjct: 51 GVPASGQGKLITVKTDVLSLTINTRGGDIEQAHLLAYPDTLGSDKPFHLL--ETTSEFVY 108 Query: 121 FAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 A+ N P T + I + + A+ + + +T L Sbjct: 109 QAQSGLTGKNGPDNPANGPRPLFTTTQDSFELADGQSELRIPMTYTAADGVTYTKTFVLK 168 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 Y + +V N S + + G++ + T ++ F + A Sbjct: 169 RGDYALNVDYSVNNTSAQPLELTLFGQLKQSIELPKHRDTGSSNFALHTYRGAAFSSSED 228 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS + N + W+ + +Y+A+ +IP+ + L +G A F Sbjct: 229 KYKKYSFSDMDENLNITTNGGWVAMLQQYFATAWIPTTAGANTFYTSKLGNGQA--AIGF 286 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + + + G L+ G + + P ++ +D+GW +FI++P+F L Sbjct: 287 KSAPVVVAAGSQQDLKTTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLFKL 341 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + ++ +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 342 LKFLHSFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRLLQPKLQAMRERIGDDK-Q 400 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK+ +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 401 RMSQEMMALYKSEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 460 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 461 PYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 501 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 502 VFFLWFPSGLVMYYIVSNLVTILQQQLIYR-GLEKRGLHSREKK 544 >gi|167856364|ref|ZP_02479091.1| putative inner membrane protein translocase component YidC [Haemophilus parasuis 29755] gi|167852502|gb|EDS23789.1| putative inner membrane protein translocase component YidC [Haemophilus parasuis 29755] Length = 546 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 158/583 (27%), Positives = 284/583 (48%), Gaps = 48/583 (8%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M N + + + +S +I WQ Y P I+ QT + NQ + A+ + Sbjct: 1 MNSNRSLLIMGLLLVSFLIFTQWQQDYN-PEIQAQKQAMAQAQTQQVANQSSDVPASSNV 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + ++ L +++ G D +L Y+ ++ SN+P L N K Sbjct: 60 ASINEQSTKGKTITIETDVLRLTVDTLGGDVVDSDLLKYNAELDSNTPFELL--QDNGKV 117 Query: 119 AYFAELDYVS------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ V TA + + + L G+ + L F+ +++++ +T Sbjct: 118 LYVAQSGLVGKNGIDTTAGRAQYQATAEKFALAEGQ---NEIDVPLTFE-KDDVVYTKTF 173 Query: 173 SLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGDKSLV 230 +L Y + + N S + + P G++ ++A N G + + Sbjct: 174 TLKRGSYNVAVNYHIKNGSAETLEVQPYGQLKHTLVESAGNFAMPTYTGGAYSSSEVNYK 233 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + ++ K+++S W + Y+ S +IP+++ + + G+ + Sbjct: 234 KYSFDEMAKANLS-VDTKAGWAAVLQHYFVSAWIPNQDAENNLYTRT---GNGVGTIGYR 289 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + P T + L+ G K+ + + F++ +D+GW +FIAKP+F L+ Sbjct: 290 GPVTQVAPNGEATIISHLWTGPKDQAAMAQVANN-----FDLTVDYGWAWFIAKPLFWLL 344 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++ ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QP+I E+RE+F Q Sbjct: 345 TFIQSIVSNWGLAIIGVTIVVKTILYPLTKAQYTSMAKMRMLQPRIQEMRERFGDD-RQR 403 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M++LYK +NP+ GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 404 MSQEMMKLYKEEKVNPMGGCLPILLQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDP 463 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 IF P++M SM++ KMSP P AD Q ++N+MPV+F Sbjct: 464 YYIF-------------------PLLMGGSMYLLQKMSPTPIADPVQQKVMNFMPVMFTV 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 FP+GL++YW SN+I+I QQ +I + + + GL R++ Sbjct: 505 FFLWFPSGLVLYWLTSNLITIAQQWLIYR-NLEKKGLHTRVKK 546 >gi|253690653|ref|YP_003019843.1| 60 kDa inner membrane insertion protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259515701|sp|C6DK98|OXAA_PECCP RecName: Full=Inner membrane protein oxaA gi|251757231|gb|ACT15307.1| 60 kDa inner membrane insertion protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 544 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 147/584 (25%), Positives = 259/584 (44%), Gaps = 52/584 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E N Q ++Q N+ + Sbjct: 1 MDSQRNLLL-IALLFVTFMLWQAW------ETDKNPPATTQAIQQ---ATNAVTGDATNQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + +L Y + S+ P L + ++ Y Sbjct: 51 GVPASGQGKLITVKTDVLSLTINTRGGDVEQAHLLAYPDTLGSDKPFHLL--ETTSEFVY 108 Query: 121 FAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 A+ N P T + I + + A+ + + +T L Sbjct: 109 QAQSGLTGKNGPDNPANGPRPLFTTTQDSFELADGQNELRIPMTYTAADGVTYTKTFVLK 168 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 Y + +V N S + + G++ + T ++ F + A Sbjct: 169 RGDYALNVDYSVNNTSAQPLELTLFGQLKQSIDLPKHRDTGSSNFALHTYRGAAFSSSED 228 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS + N ++ W+ + +Y+A+ +IP+ + L +G A F Sbjct: 229 KYKKYSFSDMDENLNITTNSGWVAMLQQYFATAWIPTTAGANTFYTNKLGNGQA--AIGF 286 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 A + + G L+ G + + P ++ +D+GW +FI++P+F L Sbjct: 287 KAAPVVVAAGSQQNLNATLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLFKL 341 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 342 LKFLHGFIGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKLQAMRERIGDDK-Q 400 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK+ +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 401 RMSQEMMALYKSEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 460 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 461 PYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 501 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 502 VFFLWFPSGLVMYYIVSNLVTILQQQLIYR-GLEKRGLHSREKK 544 >gi|269103816|ref|ZP_06156513.1| OxaI/YidC membrane insertion protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268163714|gb|EEZ42210.1| OxaI/YidC membrane insertion protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 540 Score = 485 bits (1248), Expect = e-134, Method: Composition-based stats. Identities = 148/573 (25%), Positives = 263/573 (45%), Gaps = 49/573 (8%) Query: 1 MERNWN--YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S ++ W + P+ + ++ + P+ V Sbjct: 1 MDSQRNILLIALLFVSFLLFQQWNSD-KNPQPQSQGVAQQVNNSGDVPS-HSADGQLVTD 58 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 +Q L + +K L +++ G D L Y+ + S P V L +N ++ Sbjct: 59 QSSSQNL-----ITIKTDVLALTVDTLGGDVVDAKLLKYNNTLGSKDPFVLL--ENNPEH 111 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGK-ILTP---TTPIKLVFKNANNILFERTISL 174 +Y A+ + N I+ + + L P + + ++ + I + +T L Sbjct: 112 SYVAQSGLIG-QNGIDTNAGRAQFTVSGKDFTLAPDQKELRVPMTYE-KDGIKYTKTFVL 169 Query: 175 D-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG--DKSLVE 231 Y + T+ N S ++ RH + ++ + D + + Sbjct: 170 KPNSYAVNVDYTIDNQSAAPTSVQMYAQL-RHSLVASKSSLTMPTYQGGAYSSVDTNYKK 228 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D++ ++ N + W+ + Y+ S +IP + S Y Sbjct: 229 YSFDDMKDKNL-NVTTPDGWVAVLQHYFVSAWIPRDGNESLNNLYSRSSDGNGY-IGVRM 286 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 +T+ PG + T L+ G K + K+L + +D+GW +FIA P+ L+S Sbjct: 287 PAVTVAPGATDTLKATLWVGPKLQNEMAATAKNLN-----LTVDYGWLWFIASPLHKLLS 341 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + +++VGN+G+AIM+ T V+ +PL K QY S A M+ +QPK+ +RE+F Q L Sbjct: 342 FIHSIVGNWGVAIMVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERFGDD-RQRL 400 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + M++LY+ +NPL GC PIL+Q+P+F A+Y + S+E+RHAPF+GWI DL+A DP Sbjct: 401 SQEMMELYRKEKVNPLGGCLPILVQMPIFIALYWALMESVELRHAPFFGWIHDLSAQDPY 460 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 I PI+M ++MF+ KMSP D Q I+ +MPV+F F Sbjct: 461 YIL-------------------PILMGITMFMIQKMSPSTITDPMQQKIMTFMPVMFTFF 501 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + + Sbjct: 502 FLWFPSGLVLYWLVSNIVTLIQQTLIYRSLEKK 534 >gi|149190488|ref|ZP_01868759.1| putative inner membrane protein translocase component YidC [Vibrio shilonii AK1] gi|148835742|gb|EDL52708.1| putative inner membrane protein translocase component YidC [Vibrio shilonii AK1] Length = 540 Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats. Identities = 149/571 (26%), Positives = 254/571 (44%), Gaps = 44/571 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + I L+++ +Q + Y + ++ T+ P+ D A Sbjct: 1 MDSQRN-ILLIGLALVSFLLFQQWQSYKNPAPVPTQQTQSSTLPAPSFADEHDPAPGQSQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L IN G L Y ++ S+ P L + + + Sbjct: 60 TAAE----KIITVKTDVLTLGINTVGGDVVTAKLNEYATELESSEPFELL--KDDQGHQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V S + + + + + F+ AN I + +T L Sbjct: 114 IAQSGLVGPQGIDLSSTSRPAYTVSADSFTIADGQDELRVPMTFE-ANGISYTKTFILKR 172 Query: 177 -HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKY 234 +Y + V NNS F + ++ + T G D + + Sbjct: 173 GNYAIDVEYDVDNNSGQNATFGMYAHLRQNLQDKGGSITMPTYNGGAYSTQDVRYKKYSF 232 Query: 235 SDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D++ ++S N + W + Y+A+ +IP + + + + + Sbjct: 233 EDMQDRNLSLNLTDGQGWAAMIQHYFAAAWIPREAPGTNLYTRVIGNLGD---IGVRMPN 289 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 TI G+S T L+AG K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 290 ATIADGQSATLKATLWAGPKLQKQMAE-----TAPNLDLVVDYGWLWFIAKPLHTLLSFI 344 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 +V N+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 345 QGIVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMSQ 403 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP I Sbjct: 404 EMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYI 463 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 L-------------------PLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFL 504 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + + Sbjct: 505 WFPSGLVLYWLVSNIVTLIQQTLIYRALEKK 535 >gi|258622952|ref|ZP_05717967.1| inner membrane protein, 60 kDa [Vibrio mimicus VM573] gi|258584735|gb|EEW09469.1| inner membrane protein, 60 kDa [Vibrio mimicus VM573] Length = 541 Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats. Identities = 145/571 (25%), Positives = 254/571 (44%), Gaps = 43/571 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + + + + L SI+ G L Y ++ S+ V L + + + Sbjct: 60 ---AAAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYSEELDSSESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ AN I + +T L Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVSADSFSLAEGQDELRIPMTYQ-ANGIDYTKTFILKR 173 Query: 177 -HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKY 234 Y +V V NNS + + ++ + N G D + + Sbjct: 174 GSYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSF 233 Query: 235 SDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D++ ++S ++ + +W+ + Y+AS +IP E + +++ Sbjct: 234 DDMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPN 290 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 TI G L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 291 KTIANGDKAEFEATLWVGPKLQDQMAAV-----APNLDLVVDYGWLWFIAKPLHWLLSFI 345 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 QSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMSQ 404 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP I Sbjct: 405 EMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYI 464 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 465 L-------------------PLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFL 505 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 506 WFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|260912766|ref|ZP_05919252.1| YidC/Oxa1 family membrane protein insertase [Pasteurella dagmatis ATCC 43325] gi|260633144|gb|EEX51309.1| YidC/Oxa1 family membrane protein insertase [Pasteurella dagmatis ATCC 43325] Length = 541 Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats. Identities = 154/574 (26%), Positives = 263/574 (45%), Gaps = 51/574 (8%) Query: 1 ME--RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ R+ + +S ++ WQ Y P+ VK + V S + Sbjct: 1 MDSRRSLLVIALLFISFLVYQQWQLDYHTPKPVVTEQ-------VKVSSDVPASSTSSTS 53 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + L+N L ++ G L + ++ SN+P L + N + Sbjct: 54 DIATTAQIQGRVITLENDVLRLKVDTLGGDVIHSELLKHDAELDSNTPFTLLTNKQN--H 111 Query: 119 AYFAELDYVST------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ V A + L G+ + LVF+ + + F + Sbjct: 112 VYIAQSGLVGKDGIDTKAGRASYQVEGDAFKLAEGQ---NELVVPLVFE-KDGVTFRKVF 167 Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLV 230 L + Y + + N S I P G++ + N G + + Sbjct: 168 VLKRNAYDISVNFEIDNQSEKAIEVEPYGQLRHTLVEDTGNVAMPTYTGGAYSSSETNYK 227 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + +++K++++ W+ + Y+ S +IP+++ + + + Sbjct: 228 KYSFDEMQKANLA-VSTKAGWVAVLQHYFVSAWIPNQDADNQ-LYSLTDKANNLASIGYR 285 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 I G T T+ L+ G K + ++ +D+GW +FIAKP+F L+ Sbjct: 286 GPTTVISAGAKETITSSLWTGPKLQDQMAAVAN-----HLDLTVDYGWAWFIAKPLFWLL 340 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++ ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F + Q Sbjct: 341 TFIQSIVHNWGLAIIGVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERFGED-RQR 399 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 400 MSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDP 459 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PI+M SMF+ KMSP P AD Q I+N+MP++F+ Sbjct: 460 YYIL-------------------PILMGASMFLLQKMSPTPVADPMQQKIMNFMPLIFMV 500 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+I+I QQ +I + + Sbjct: 501 FFLWFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|56552522|ref|YP_163361.1| putative inner membrane protein translocase component YidC [Zymomonas mobilis subsp. mobilis ZM4] gi|59803051|sp|Q9RNL5|OXAA_ZYMMO RecName: Full=Inner membrane protein oxaA gi|56544096|gb|AAV90250.1| YidC translocase/secretase [Zymomonas mobilis subsp. mobilis ZM4] Length = 579 Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats. Identities = 176/585 (30%), Positives = 298/585 (50%), Gaps = 11/585 (1%) Query: 1 ME---RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + N + LS +I++ W F + + + + Sbjct: 1 MDDKHQQRNLVIVTILSALILFGWS-FVTKHWLSTPPAPTQQGKNQPKAELTAEESGDKP 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + Q L +PR+ + S+ GS+NLKG + DDL L + ++ NSP V L SP+ T+ Sbjct: 60 LKPVDQVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTE 119 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 NA+F + T N+ LPN++++W S K LT P+ + N +F T+S+D Sbjct: 120 NAWFTSFGW--TGENVALPNADSLWKADSDK-LTADHPVNFYWNNQQGQIFRITLSVDHD 176 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+F ++V N + P +++ + G I V ++DI Sbjct: 177 YMFNATESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADI 236 Query: 238 EK--SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +K ++ + W+G SDKYW + P + S + YQA F+ + Sbjct: 237 DKATNNSIRNNTQGGWIGFSDKYWLTALAPH-NQKIAIDTDFRSSSNHHYQADFTVAPVV 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + GK+ +T+ +FAGAKE + Y L +P F+ IDWGWF I K F + + + Sbjct: 296 VAAGKTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFL 355 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L ++ L FP+A KQY S A+M+ +QPK+ +RE++K + +++ + Sbjct: 356 HVGNYGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEAR-MRQEL 414 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY+ +NP AGC P+ +Q P+F A+YK + +++E RH PF WIKDL+A DP F Sbjct: 415 VTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFN 474 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+L F P F+ +G+ PII+ ++M++Q + SP + Q I++++P++ V ++ Sbjct: 475 LFGLLHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLA 534 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 AGL +Y+ ++N+IS+ Q + H DR + Sbjct: 535 AGLQVYYIFNNLISLAQMMWLQHRHSTPEERQDRAERKRPSKKKA 579 >gi|292490140|ref|YP_003533035.1| inner membrane protein YidC [Erwinia amylovora CFBP1430] gi|292901144|ref|YP_003540513.1| inner membrane protein [Erwinia amylovora ATCC 49946] gi|291200992|emb|CBJ48131.1| inner membrane protein [Erwinia amylovora ATCC 49946] gi|291555582|emb|CBA24181.1| Inner membrane protein yidC [Erwinia amylovora CFBP1430] gi|312174333|emb|CBX82586.1| Inner membrane protein yidC [Erwinia amylovora ATCC BAA-2158] Length = 548 Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 155/592 (26%), Positives = 259/592 (43%), Gaps = 64/592 (10%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ L S +I AWQ N + +QT Q Q S A Sbjct: 1 MDSQRNLFLIAFLFVSFMIWQAWQTD----------NAPQPLQT--QTTQNTASAAGDAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + A + +K L +IN +G D L Y + S+ P LL S Sbjct: 49 NQGVPASGQGKTITVKTDVLSLNINTRGGDIDQAQLLTYPDKLDSDQPF--LLLESTPGF 106 Query: 119 AYFAELDYVS--------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 Y A+ +S + L G+ I L F N + + Sbjct: 107 LYQAQSGLTGRNGPDNPANGTRPLYTSSQDHFELADGQS---ELRIPLTFTAENGASYTK 163 Query: 171 TISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIA 222 T L Y + + N + + S G++ + T ++ F + G Sbjct: 164 TFVLKRGEYAIGVDYQINNTTQQPLEVSMFGQLKQTIDLPKHRDTGSSNFALHTFRGAAY 223 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + + K+ I + + +N W+ + +Y+A+ ++P S L +G Sbjct: 224 SSSETNYEKYKFDTIRDNENLSTTTNNGWVAMLQQYFATAWVPQTAGSNTLYTSNLGNGI 283 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 A + + +TI G L+ G + + P ++ +D+GW +FI Sbjct: 284 A--AIGYKSAPVTIAAGSRQQLAATLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFI 336 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 ++P+F L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 337 SQPLFKLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRER 396 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI Sbjct: 397 LGDDK-QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWI 455 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521 DLAA DP I PI+M ++MF KMSP D Q I+ Sbjct: 456 HDLAAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMT 496 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +MPV+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 497 FMPVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 547 >gi|259910298|ref|YP_002650654.1| putative inner membrane protein translocase component YidC [Erwinia pyrifoliae Ep1/96] gi|224965920|emb|CAX57453.1| Inner membrane protein OxaA [Erwinia pyrifoliae Ep1/96] gi|283480422|emb|CAY76338.1| Inner membrane protein yidC [Erwinia pyrifoliae DSM 12163] gi|310765879|gb|ADP10829.1| putative inner membrane protein translocase component YidC [Erwinia sp. Ejp617] Length = 548 Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 156/592 (26%), Positives = 259/592 (43%), Gaps = 64/592 (10%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ L S +I AWQ N + +QT Q Q S A Sbjct: 1 MDSQRNLFLIAFLFVSFMIWQAWQTD----------NAPQPLQT--QTTQNTASAAGDAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + A + +K L +IN +G D L Y + S+ P LL S Sbjct: 49 NQGVPASGQGKTITVKTDVLSLNINTRGGDIDQAQLLTYPDKLGSDQPF--LLLESTPGF 106 Query: 119 AYFAELDYVS--------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 Y A+ +S + L G+ I L F N + + Sbjct: 107 LYQAQSGLTGRNGPDNPANGARPLYTSSQDHFELADGQS---ELRIPLTFTAENGATYTK 163 Query: 171 TISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIA 222 T L Y + + N + + S G++ + T ++ F + G Sbjct: 164 TFVLKRGEYAIGVDYQINNTTQQPLEVSMFGQLKQTIDLPKHRDTGSSNFALHTFRGAAY 223 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + + K+ I + + SN W+ + +Y+A+ ++P S L +G Sbjct: 224 SSSETNYEKYKFDTISDNENLSTTTSNGWVAMLQQYFATAWVPQTAGSNTLYTSNLGNGI 283 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 A + + +TI G L+ G + + P ++ +D+GW +FI Sbjct: 284 A--AIGYKSAPVTIAAGSQQQLAATLWVGPEIQDRMAAV-----APHLDLTVDYGWLWFI 336 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 ++P+F L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 337 SQPLFKLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRER 396 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI Sbjct: 397 LGDDK-QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWI 455 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521 DLAA DP I PI+M ++MF KMSP D Q I+ Sbjct: 456 HDLAAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMT 496 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +MPV+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 497 FMPVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 547 >gi|260595827|ref|YP_003208398.1| membrane protein insertase [Cronobacter turicensis z3032] gi|260215004|emb|CBA26663.1| Inner membrane protein oxaA [Cronobacter turicensis z3032] Length = 549 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 151/588 (25%), Positives = 263/588 (44%), Gaps = 55/588 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N FV IAL + WQ + ++ V+Q Q + A Sbjct: 1 MDSQRNLFV-IALLFVSFMIWQAW---------EQDKAPKPQVQQTTQTTTTAAGSAASQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ S+ P L + N Y Sbjct: 51 GVPASGQGKLITVKTDVLSLTINTRGGDIEQALLLAYPKELGSSEPFQLLETTPNF--IY 108 Query: 121 FAELDYVS--TANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISL 174 A+ +N ++N+ + I + F +A F +T +L Sbjct: 109 QAQSGLTGRNGPDNPNNNQGRPLYNVERDTYVLADGQDELLIPMTFTDAAGNAFTKTFAL 168 Query: 175 DEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGD 226 Y + V N + S G++ + T +N F + G D Sbjct: 169 KRGQYAVYVGYDVKNAGTQPLEVSSFGQLKQTIDLPSHRDTGSNNFALHTFRGAAYSTPD 228 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + + K+ I N + W+ + +Y+A+ ++P+ ++ S F GH Sbjct: 229 EKYEKYKFDTIADDENLNVNAKGGWVAMLQQYFATAWVPA--SNVTSNFYTADLGHGVAA 286 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+ Sbjct: 287 IGYKSEPVQVQPGQTAKLASTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPL 341 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + ++ +GN+G +I+ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 FKLLKWIHSFLGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKIQAMRERLGDD 401 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+ Sbjct: 402 K-QRMSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLS 460 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A DP I PI+M +MF KMSP D Q I+ +MPV Sbjct: 461 AQDPYYIL-------------------PILMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 501 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 502 IFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSREKKK 548 >gi|253991870|ref|YP_003043226.1| inner membrane protein translocase component YidC [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783320|emb|CAQ86485.1| similar to 60 kda inner-membrane protein yidc of escherichia coli [Photorhabdus asymbiotica] Length = 546 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 149/589 (25%), Positives = 263/589 (44%), Gaps = 57/589 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + N + +Q +Q + AV Sbjct: 1 MDSQRNLLL-IALLFVSFLVWQAW-----EADKNPQPTTVQATQQTDMPSGENQAVPGS- 53 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L +IN +G ++ +L Y + SN P L + Y Sbjct: 54 -----GKGKLITVKTDVLSLTINTRGGDIEEADLLAYPDTLGSNQPFKLL--ETTPAFTY 106 Query: 121 FAELDYVSTAN-----NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 A+ N E P T + I L F + +++ +T L Sbjct: 107 QAQSGLTGKDGPDNPTNSERPLYTTAQDSYVLDNGQDELRIPLNFVAKDGVVYVKTFVLK 166 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG--DK 227 Y + + N + ++ + G++ ++ T ++ F + A D Sbjct: 167 RGEYAISVDYRIHNTTEKPLQMTFFGQLKQNVELPKHRDTGSSNFALHTYRGAAYSSDDN 226 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + +SDIE +S W+ + +Y+A+ +IPS S F S Sbjct: 227 KYKKHSFSDIESEPLS-VTTKGGWVAMLQQYFATAWIPSANE--TSTFYTASLDKKMAAI 283 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + I++ T ++ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 284 GYKSAPISVAANSEKTVSSTLWIGPEIQDEMAAV-----APHLDLSVDYGWLWFISQPLF 338 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 339 KLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDD- 397 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF GWI DL+A Sbjct: 398 RQRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFAGWINDLSA 457 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I P++M ++MF+ KMSP D Q I+ +MPV+ Sbjct: 458 QDPYYIL-------------------PLLMGVTMFVIQKMSPTTITDPMQQKIMTYMPVM 498 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 499 FTIFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKPAK 546 >gi|168235484|ref|ZP_02660542.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734490|ref|YP_002116785.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|204928556|ref|ZP_03219755.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|254778160|sp|B4TN10|OXAA_SALSV RecName: Full=Inner membrane protein oxaA gi|194709992|gb|ACF89213.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291370|gb|EDY30722.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204321989|gb|EDZ07187.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|320088263|emb|CBY98025.1| Inner membrane protein oxaA [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322617246|gb|EFY14151.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619066|gb|EFY15952.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625133|gb|EFY21961.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630184|gb|EFY26955.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634390|gb|EFY31124.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635275|gb|EFY31990.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642901|gb|EFY39485.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647619|gb|EFY44106.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650575|gb|EFY46982.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656399|gb|EFY52691.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661579|gb|EFY57802.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661660|gb|EFY57879.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668226|gb|EFY64384.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672845|gb|EFY68953.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322674974|gb|EFY71060.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683664|gb|EFY79677.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687740|gb|EFY83709.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192045|gb|EFZ77280.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200527|gb|EFZ85605.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204953|gb|EFZ89938.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206696|gb|EFZ91653.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211768|gb|EFZ96601.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218630|gb|EGA03337.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220031|gb|EGA04501.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224801|gb|EGA09066.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232490|gb|EGA16592.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235265|gb|EGA19350.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241053|gb|EGA25090.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241397|gb|EGA25429.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248628|gb|EGA32558.1| membrane protein insertase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252073|gb|EGA35933.1| membrane protein insertase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258623|gb|EGA42286.1| membrane protein insertase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262346|gb|EGA45904.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268182|gb|EGA51658.1| membrane protein insertase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270596|gb|EGA54041.1| membrane protein insertase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 548 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 146/589 (24%), Positives = 259/589 (43%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + +V N + S G++ + T ++ F + G Sbjct: 167 FKRGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|242241427|ref|YP_002989608.1| inner membrane protein translocase component YidC [Dickeya dadantii Ech703] gi|242133484|gb|ACS87786.1| 60 kDa inner membrane insertion protein [Dickeya dadantii Ech703] Length = 543 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 154/589 (26%), Positives = 262/589 (44%), Gaps = 63/589 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E +Q N A Sbjct: 1 MDSQRNLLI-IALLFVTFMIWQQW------ETDKTPPAATPITQQANNTVGDAA----SQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G ++ +L Y D+ S P L + Y Sbjct: 50 GVPASGQGKLITVKTDVLSLTINTRGGDIEEADLLAYPADLGSKQPFKLL--ETTQAFTY 107 Query: 121 FAELDYVS--------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 A+ + + + L G+ I L + +AN I + +T Sbjct: 108 QAQSGLTGKNGPDNPANGSRPLFSATQDHFELADGQ---NDIRIPLTYTDANGISYTKTF 164 Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG- 225 +L Y + V N S + + G++ + T +N F + A L Sbjct: 165 ALKRGEYALNVEYGVNNTSAQPLELTLFGQLKQSIDLPSHRDTGSNNFALHTYRGAALSS 224 Query: 226 -DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 D + +SD++++ N W+ + +Y+AS +IP+ + L +G A Sbjct: 225 SDDKYRKYSFSDMKEN--LNVATQGGWVAMLQQYFASAWIPAAGGANTFYTSNLGNGLA- 281 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 F A + + PG T L+ G + + P ++ +D+GW +FI++ Sbjct: 282 -AIGFKATPVIVQPGSQQTLGATLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQ 335 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + ++ +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 336 PLFKLLKFLHSFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIG 395 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI D Sbjct: 396 DDK-QRMSQEMMALYKAEKVNPLGGCFPLVIQMPIFLALYYMLMGSVELRHAPFALWIHD 454 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+A DP + PI+M L+MF KMSP D Q I+ +M Sbjct: 455 LSAQDPYYVL-------------------PILMGLTMFFIQKMSPTTVTDPMQQKIMTYM 495 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 PV+F FP+GL++Y+ SN+++IVQQ +I + + GL R + Sbjct: 496 PVMFTVFFLWFPSGLVLYYIVSNLVTIVQQQLIYR-GLEKRGLHSREKK 543 >gi|260753817|ref|YP_003226710.1| inner membrane protein translocase component YidC [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553180|gb|ACV76126.1| 60 kDa inner membrane insertion protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 579 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 179/584 (30%), Positives = 299/584 (51%), Gaps = 12/584 (2%) Query: 1 ME---RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + N + LS +I++ W F + + + + Sbjct: 1 MDDKHQQRNLVIVTILSALILFGWS-FVTKHWLSTPPAPTQQGKNQPKAELTAEESGDKP 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + Q L +PR+ + S+ GS+NLKG + DDL L + ++ NSP V L SP+ T+ Sbjct: 60 LKPVDQVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTE 119 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 NA+F + T N+ LPN++++W S K LT P+ + N +F T+S+D Sbjct: 120 NAWFTSFGW--TGENVALPNADSLWKADSDK-LTAEHPVNFYWNNQQGQIFRITLSVDHD 176 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+F ++V N + P +++ + G I V ++DI Sbjct: 177 YMFNATESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADI 236 Query: 238 EK--SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +K ++ W+G SDKYW + P + S + YQA F+ + Sbjct: 237 DKATNNSIRNSTQGGWIGFSDKYWLTALAPH-NQKIAIDTDFRSSSNHHYQADFTVAPVM 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + GK+ +T+ +FAGAKE + Y L +P F+ IDWGWF I K F + + + Sbjct: 296 VAAGKTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFL 355 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L ++ L FP+A KQY S A+M+ +QPK+ +RE++K + +++ + Sbjct: 356 HVGNYGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEAR-MRQEL 414 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY+ +NP AGC P+ +Q P+F A+YK + +++E RH PF WIKDL+A DP F Sbjct: 415 VTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFN 474 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+L F P F+ +G+ PII+ ++M++Q + SP + Q I++++P++ V ++ Sbjct: 475 LFGLLHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLA 534 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR-LRSTFSKNY 578 AGL +Y+ ++N+IS+ Q + H DR R SK Sbjct: 535 AGLQVYYIFNNLISLAQMMWLQHRHSTPEERQDRAERKRLSKKK 578 >gi|156936084|ref|YP_001440000.1| putative inner membrane protein translocase component YidC [Cronobacter sakazakii ATCC BAA-894] gi|166975864|sp|A7MN02|OXAA_ENTS8 RecName: Full=Inner membrane protein oxaA gi|156534338|gb|ABU79164.1| hypothetical protein ESA_03978 [Cronobacter sakazakii ATCC BAA-894] Length = 550 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 151/590 (25%), Positives = 261/590 (44%), Gaps = 55/590 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ V+Q Q + A Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQTW---------EQDKAPKPQVQQTTQTTTTAAGSAASQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ S+ P L + N Y Sbjct: 51 GVPASGQGKLITVKTDVLSLTINTRGGDIEQALLLAYPKELGSSEPFQLLETTPNF--VY 108 Query: 121 FAELDYVS------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 A+ NN P NT + I + F + F +T +L Sbjct: 109 QAQSGLTGRNGPDNPNNNKGRPLYNTERDTYVLADGQDELVIPMTFTDEAGNAFTKTFAL 168 Query: 175 DEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGD 226 Y + V N + S G++ + T ++ F + G D Sbjct: 169 KRGQYAVYVGYDVKNAGTQPLEISSFGQLKQTIDLPSHRDTGSSNFALHTFRGAAYSTPD 228 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + + K+ I N + W+ + +Y+A+ ++P+ ++ S F GH Sbjct: 229 EKYEKYKFDTIADDENLNVNAKGGWVAMLQQYFATAWVPA--SNVTSNFYTADLGHGVAA 286 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+ Sbjct: 287 IGYKSEPVQVQPGQTAKLASTLWVGPEIQDKMAQV-----APHLDLTVDYGWLWFISQPL 341 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + ++ +GN+G +I+ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 FKLLKWIHSFLGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKIQAMRERLGDD 401 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+ Sbjct: 402 K-QRMSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLS 460 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A DP I PI+M +MF KMSP D Q I+ +MPV Sbjct: 461 AQDPYYIL-------------------PILMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 501 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 +F FP+GL++Y+ SN+++I+QQ +I + + GL R + + Sbjct: 502 IFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSREKKKKA 550 >gi|241762238|ref|ZP_04760320.1| 60 kDa inner membrane insertion protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373285|gb|EER62904.1| 60 kDa inner membrane insertion protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 579 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 179/584 (30%), Positives = 300/584 (51%), Gaps = 12/584 (2%) Query: 1 ME---RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + N + LS +I++ W F + + + + Sbjct: 1 MDDKHQQRNLVIVTILSALILFGWS-FVTKHWLSTPPAPTQQGKNQLKAELTAEESGDKP 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + Q L +PR+ + S+ GS+NLKG + DDL L + ++ NSP V L SP+ T+ Sbjct: 60 LKPVDQVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTE 119 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 NA+F + T N+ LPN++++W S K LT P+ + N +F T+S+D Sbjct: 120 NAWFTSFGW--TGENVALPNADSLWKADSDK-LTADHPVNFYWNNQQGQIFRITLSVDHD 176 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+F ++V N + P +++ + G I V ++DI Sbjct: 177 YMFNATESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADI 236 Query: 238 EK--SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +K ++ + W+G SDKYW + P + S + YQA F+ + Sbjct: 237 DKATNNSIRNNTQGGWIGFSDKYWLTALAPH-NQKIAIDTDFRSSSNHHYQADFTVAPVV 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + GK+ +T+ +FAGAKE + Y L +P F+ IDWGWF I K F + + + Sbjct: 296 VAAGKTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFL 355 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L ++ L FP+A KQY S A+M+ +QPK+ +RE++K + +++ + Sbjct: 356 HVGNYGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEAR-MRQEL 414 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY+ +NP AGC P+ +Q P+F A+YK + +++E RH PF WIKDL+A DP F Sbjct: 415 VTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFN 474 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+L F P F+ +G+ PII+ ++M++Q + SP + Q I++++P++ V ++ Sbjct: 475 LFGLLHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLA 534 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR-LRSTFSKNY 578 AGL +Y+ ++N+IS+ Q + H DR R SK Sbjct: 535 AGLQVYYIFNNLISLAQMMWLQHRHSTPEERQDRAERKRLSKKK 578 >gi|50123363|ref|YP_052530.1| putative inner membrane protein translocase component YidC [Pectobacterium atrosepticum SCRI1043] gi|81693013|sp|Q6CYR0|OXAA_ERWCT RecName: Full=Inner membrane protein oxaA gi|49613889|emb|CAG77341.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 544 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 150/588 (25%), Positives = 262/588 (44%), Gaps = 60/588 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E N QT++Q N+ + Sbjct: 1 MDSQRNLLL-IALLFVTFMLWQAW------ETDKNPPATTQTIQQ---ATNAVTGDATNQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + +L Y + S+ P L + + Y Sbjct: 51 GVPASGQGKLITVKTDVLSLTINTRGGDVEQAHLLAYPDILGSDKPFHLL--ETTSAFVY 108 Query: 121 FAELDYVSTANNIELP---------NSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 A+ N + P + + L G+ I + + A+ + + +T Sbjct: 109 QAQSGLTG-KNGPDNPANGSRPLFVTTQDSFELADGQS---ELRIPMTYTAADGVTYTKT 164 Query: 172 ISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG 225 L Y + +V N S + + G++ + T +N F + A Sbjct: 165 FVLKRGDYALNVDYSVNNTSAQPLELTLFGQLKQSIDLPKHRDTGSNNFALHTYRGAAFS 224 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 +KYS + N ++ W+ + +Y+A+ +IP+ + L +G A Sbjct: 225 SSEDKYKKYSFSDMDEGLNITTNSGWVAMLQQYFATAWIPTTAGANTFYTSKLGNGQA-- 282 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 F A + I G L+ G + + P ++ +D+GW +FI++P Sbjct: 283 AIGFKAAPVIIAAGSQQNLNATLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 337 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 338 LFKLLKFLHGFIGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKLQAMRERIGD 397 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 398 DK-QRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDL 456 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 457 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTYMP 497 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 498 VIFTVFFLWFPSGLVMYYIVSNLVTILQQQLIYR-GLEKRGLHSREKK 544 >gi|261213269|ref|ZP_05927551.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC341] gi|260837543|gb|EEX64246.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC341] Length = 541 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 147/572 (25%), Positives = 256/572 (44%), Gaps = 45/572 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAADAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + + + + L SI+ G L Y ++ S V L + + + Sbjct: 60 ---AAAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYAEELDSAESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I++ ++N ++ + T I + ++ AN I + +T L Sbjct: 115 IAQSGLVGPQG-IDVTSNNRPAYQVNAESFTLAEGQDELRIPMTYQ-ANGIDYTKTFILK 172 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y +V V NNS + + ++ + N G D + Sbjct: 173 RGSYAVDVVFDVANNSGNPATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYS 232 Query: 234 YSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S ++ + +W + Y+AS +IP E + +S+ Sbjct: 233 FDDMKDRNLSAPNDVTVNWAAMIQHYFASAWIPRNEPQAQLYSRVISNLGD---IGIRTP 289 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 290 NKTIANGDKAEFEATLWVGPKLQDKMAAV-----APNLDLVVDYGWLWFIAKPLHWLLSV 344 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 345 IQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMS 403 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC PI+LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 404 QEMMELYKKEKVNPLGGCLPIVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY 463 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 IL-------------------PLLMGASMFVIQKMSPTTVTDPMQQKIMTFMPVMFTFFF 504 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 505 LWFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|56415715|ref|YP_152790.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161616962|ref|YP_001590927.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168234429|ref|ZP_02659487.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168464827|ref|ZP_02698719.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194468665|ref|ZP_03074649.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197249737|ref|YP_002148779.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197364643|ref|YP_002144280.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|238913094|ref|ZP_04656931.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|81678053|sp|Q5PKU2|OXAA_SALPA RecName: Full=Inner membrane protein oxaA gi|189036360|sp|A9MX83|OXAA_SALPB RecName: Full=Inner membrane protein oxaA gi|254773019|sp|B5EYX5|OXAA_SALA4 RecName: Full=Inner membrane protein oxaA gi|254778159|sp|B5BIL8|OXAA_SALPK RecName: Full=Inner membrane protein oxaA gi|56129972|gb|AAV79478.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161366326|gb|ABX70094.1| hypothetical protein SPAB_04783 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194455029|gb|EDX43868.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195632342|gb|EDX50826.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197096120|emb|CAR61716.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213440|gb|ACH50837.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205331641|gb|EDZ18405.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 548 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 146/589 (24%), Positives = 260/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + +V N + S G++ + T ++ F + G Sbjct: 167 FKRGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|183597176|ref|ZP_02958669.1| hypothetical protein PROSTU_00419 [Providencia stuartii ATCC 25827] gi|188023490|gb|EDU61530.1| hypothetical protein PROSTU_00419 [Providencia stuartii ATCC 25827] Length = 549 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 154/591 (26%), Positives = 277/591 (46%), Gaps = 58/591 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + ++ + K +QT +Q + + AV Sbjct: 1 MDSQRNLLL-IALLFVSFLVWQAW----ESDKAAQDLKTVQTTQQTDMPSSDSQAVTSS- 54 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L IN +G D+ +L Y + S SP L + Y Sbjct: 55 -----GQGKLITVKTDVLDLRINTRGGDIDEADLLAYPATLHSESPFRLL--ETTPDFIY 107 Query: 121 FAELDYVSTANNIELPNSNT---VWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 A+ + NSN V+++ S + + + F + N +++++T Sbjct: 108 QAQSGLIGQHGPDNPDNSNGQRPVYSVESSSFILADGQDELRVPMTFTDKNGVVYQKTYV 167 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227 L HY + + N + + + G++ + + T ++ F + A Sbjct: 168 LKRGHYNVDVEYNIQNPTAQALNLAFFGQLKQTIQLPKERDTGSSNFALHTYRGAAYSSD 227 Query: 228 S--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + +SDIE + N W+ + +Y+A+ ++P+ +S F + G Sbjct: 228 ESNYKKYSFSDIEDKKL-NVTTKGGWVAMLQQYFATAWVPASNE--NSTFYTIDLGQKEA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI + T ++ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 IIGYKSQPLTIAANGAGTYSSTLWVGPEIQSEMAEV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + + VGN+GIAI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 340 LFKLLKFIHGFVGNWGIAIIIITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF+GWI+DL Sbjct: 400 DK-QRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFFGWIQDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I P++M ++MF+ KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PVLMGVTMFVIQKMSPTAVTDPMQQKIMTYMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 VVF FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VVFTIFFLWFPSGLVLYYIVSNLVTIIQQQIIYR-GLEKRGLHSRDKKEKK 549 >gi|194446373|ref|YP_002043091.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|254778157|sp|B4SYB1|OXAA_SALNS RecName: Full=Inner membrane protein oxaA gi|194405036|gb|ACF65258.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 548 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 146/589 (24%), Positives = 259/589 (43%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVSTAN-----NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + +A F +T Sbjct: 107 IYQAQSGLTGRGGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + +V N + S G++ + T ++ F + G Sbjct: 167 FKRGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|258626076|ref|ZP_05720927.1| inner membrane protein, 60 kDa [Vibrio mimicus VM603] gi|258581602|gb|EEW06500.1| inner membrane protein, 60 kDa [Vibrio mimicus VM603] Length = 539 Score = 482 bits (1240), Expect = e-133, Method: Composition-based stats. Identities = 148/573 (25%), Positives = 252/573 (43%), Gaps = 49/573 (8%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N +A+AL S ++ WQ N + Q + + + Sbjct: 1 MDSQRNILLIALALVSFLLFQQWQV--------AKNPAPQATQQAQSTGAAPAPSFSDEL 52 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D + + + + L SI+ G L Y ++ S V L + + Sbjct: 53 DPTPSQNAAAKTITVTTDVLTLSIDTIGGDIVTAKLNQYSEELDSAESFVLLQNTQG--H 110 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFERTISL 174 + A+ V N+ + + + I + ++ AN I + +T L Sbjct: 111 QFIAQSGLVGPQGIDVTSNNRPAYQVSADSFSLAEGQDELRIPMTYQ-ANGIDYTKTFIL 169 Query: 175 DE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQ 232 Y +V V NNS + + ++ + N G D + Sbjct: 170 KRGSYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKY 229 Query: 233 KYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D++ ++S ++ + +W + Y+AS +IP E + +++ Sbjct: 230 SFDDMKDRNLSAPNDVTVNWAAMIQHYFASAWIPRNEPQAQLYSRVINNLGD---IGIRT 286 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 TI G L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 287 PNKTIANGDKAEFEATLWVGPKLQDQMAAV-----APNLDLVVDYGWLWFIAKPLHWLLS 341 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 342 FIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRM 400 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 401 SQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPY 460 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 461 YIL-------------------PLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFF 501 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 502 FLWFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 534 >gi|224585641|ref|YP_002639440.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254778158|sp|C0Q2L3|OXAA_SALPC RecName: Full=Inner membrane protein oxaA gi|224470169|gb|ACN47999.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 548 Score = 481 bits (1239), Expect = e-133, Method: Composition-based stats. Identities = 146/589 (24%), Positives = 260/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + +V N + S G++ + T ++ F + G Sbjct: 167 FKRGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTSAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|16767127|ref|NP_462742.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167548869|ref|ZP_02342628.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168260373|ref|ZP_02682346.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|197265232|ref|ZP_03165306.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200387745|ref|ZP_03214357.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|38503121|sp|Q8ZKY4|OXAA_SALTY RecName: Full=Inner membrane protein oxaA gi|16422416|gb|AAL22701.1| putative preprotein translocase subunit YidC [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197243487|gb|EDY26107.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199604843|gb|EDZ03388.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205325671|gb|EDZ13510.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205350262|gb|EDZ36893.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261248983|emb|CBG26840.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996129|gb|ACY91014.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160375|emb|CBW19900.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914971|dbj|BAJ38945.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225560|gb|EFX50615.1| Inner membrane protein translocase component YidC, long form [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132203|gb|ADX19633.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 548 Score = 481 bits (1239), Expect = e-133, Method: Composition-based stats. Identities = 146/589 (24%), Positives = 259/589 (43%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + +V N + S G++ + T ++ F + G Sbjct: 167 FKRGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|168242063|ref|ZP_02666995.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448004|ref|YP_002047874.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|254773052|sp|B4TAV2|OXAA_SALHS RecName: Full=Inner membrane protein oxaA gi|194406308|gb|ACF66527.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205338842|gb|EDZ25606.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 548 Score = 481 bits (1239), Expect = e-133, Method: Composition-based stats. Identities = 146/589 (24%), Positives = 259/589 (43%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + +V N + S G++ + T ++ F + G Sbjct: 167 FKRGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRSL-EKRGLHSREKKK 547 >gi|153803663|ref|ZP_01958249.1| inner membrane protein, 60 kDa [Vibrio cholerae MZO-3] gi|153830819|ref|ZP_01983486.1| inner membrane protein, 60 kDa [Vibrio cholerae 623-39] gi|229515955|ref|ZP_04405412.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TMA 21] gi|254291134|ref|ZP_04961931.1| inner membrane protein, 60 kDa [Vibrio cholerae AM-19226] gi|297581961|ref|ZP_06943881.1| inner membrane protein [Vibrio cholerae RC385] gi|124120800|gb|EAY39543.1| inner membrane protein, 60 kDa [Vibrio cholerae MZO-3] gi|148873703|gb|EDL71838.1| inner membrane protein, 60 kDa [Vibrio cholerae 623-39] gi|150422979|gb|EDN14929.1| inner membrane protein, 60 kDa [Vibrio cholerae AM-19226] gi|229347055|gb|EEO12017.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TMA 21] gi|297533828|gb|EFH72669.1| inner membrane protein [Vibrio cholerae RC385] Length = 541 Score = 481 bits (1239), Expect = e-133, Method: Composition-based stats. Identities = 149/572 (26%), Positives = 256/572 (44%), Gaps = 45/572 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + + + L SI+ G L Y +++S V L + + + Sbjct: 60 VA---AKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I++ ++N +S T I + ++ AN I + +T L Sbjct: 115 IAQSGLVGPQG-IDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQ-ANGIDYTKTFILK 172 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y +V V NNS + + ++ + N G D + Sbjct: 173 RGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYS 232 Query: 234 YSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S ++ + +W+ + Y+AS +IP E + +++ Sbjct: 233 FDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTP 289 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 290 NKTIANGDKAEFEATLWVGPKLQDQMAA-----TAPNLDLVVDYGWLWFIAKPLHWLLSV 344 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 N VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 345 IQNFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMS 403 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 404 QEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY 463 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 IL-------------------PLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFF 504 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 505 LWFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|304398072|ref|ZP_07379947.1| membrane protein insertase [Pantoea sp. aB] gi|304354358|gb|EFM18730.1| membrane protein insertase [Pantoea sp. aB] Length = 548 Score = 481 bits (1239), Expect = e-133, Method: Composition-based stats. Identities = 150/589 (25%), Positives = 255/589 (43%), Gaps = 58/589 (9%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ L + +I AWQ + Q Q NS A Sbjct: 1 MDSQRNLFLIAFLFVTFMIWQAWQTDH------------APQPQQTQTTQGTNSVAGDAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + +K L +IN +G + L + + S+ P L + Sbjct: 49 SQGVPASGQGQTITVKTDVLSLNINTRGGDVEQAQLLTFPDKLGSDQPFQLL--ETTPAF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ NN P N N + + + N +++ +T Sbjct: 107 LYQAQSGLTGRNGPDNPNNGARPLFNAAQNHFEMADGQSELRVPMTYTAENGVVYTKTFI 166 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + V N + + S G++ + T +N F + G Sbjct: 167 FKRGEYAVNVDYHVNNTTQQPLEVSLFGQLKQTIDLPKHRDTGSNNFALHTFRGAAYSTS 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + K+ I + N SN W+ + +Y+A+ ++P E + L +G A Sbjct: 227 ESKYEKYKFDTIADNENLNATTSNGWVAMLQQYFATAWVPRTEGTNTLYTSNLGNGVA-- 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI G L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSAPVTIAAGAQQNLGATLWVGPEIQDKMAAI-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL Sbjct: 400 DK-QKQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFVLWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGITMFFIQKMSPTTVTDPMQQKIMTYMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 547 >gi|157368277|ref|YP_001476266.1| putative inner membrane protein translocase component YidC [Serratia proteamaculans 568] gi|166977412|sp|A8G7P8|OXAA_SERP5 RecName: Full=Inner membrane protein oxaA gi|157320041|gb|ABV39138.1| 60 kDa inner membrane insertion protein [Serratia proteamaculans 568] Length = 545 Score = 481 bits (1239), Expect = e-133, Method: Composition-based stats. Identities = 145/587 (24%), Positives = 253/587 (43%), Gaps = 61/587 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S +I AWQ N + QT +Q N Sbjct: 4 QRNLLLIALLFVSFMIWQAWQTD---------NAPQPVAQTTQQ---TSNPATGDAASSA 51 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A + + L +IN +G + L Y + S++P L + Y Sbjct: 52 VPASGQGKLITVNTDVLSLTINTRGGDIEQAKLLAYPDTLGSSTPFQLL--ETTPAFVYQ 109 Query: 122 AELDYVS--------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + + L G+ I L F + ++ +T Sbjct: 110 AQSGLTGRNGPDNPANGERPLFQAAQDSYTLPEGQE---ELRIPLTFTGKDGAIYTKTFV 166 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227 L + Y + V N S + + G++ + T +N F + A Sbjct: 167 LKRNHYAVAVDYNVDNKSTTPLELTLFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSSS 226 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 QKY+ +K + W+ + +Y+A+ ++P+ + S F G Sbjct: 227 DDKYQKYA-FDKDENLSVTTQGGWVAMLQQYFATAWVPATQGSNT--FYTAKPGDNLSTI 283 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F + + + PG L+ G + + P ++ +D+GW +FI++P+F Sbjct: 284 GFKSTPVVVQPGAQQQLNATLWVGPELQDQMAQL-----APHLDLTVDYGWLWFISQPLF 338 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 339 KLLKFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK 398 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 399 -QRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 457 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 458 QDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 498 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 499 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 544 >gi|146313779|ref|YP_001178853.1| putative inner membrane protein translocase component YidC [Enterobacter sp. 638] gi|166975863|sp|A4WGH2|OXAA_ENT38 RecName: Full=Inner membrane protein oxaA gi|145320655|gb|ABP62802.1| protein translocase subunit yidC [Enterobacter sp. 638] Length = 548 Score = 481 bits (1239), Expect = e-133, Method: Composition-based stats. Identities = 145/589 (24%), Positives = 260/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQQQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A ++ +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKQITVKTDVLELTINTRGGDIEQALLLTYPKELKSNEPFQLL--ETTPEF 106 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTIS 173 Y A+ N + I + + +A F +T + Sbjct: 107 LYQAQSGLTGRDGPDNPANGARPLYNVDKDTFVMADGQNELAIPMTYTDAAGNTFTKTFT 166 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N S + S G++ + T ++ F + G Sbjct: 167 LKRGEYAVSVGYNVQNTSAKPLEVSTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D + K+ I + N W+ + +Y+A+ ++P+ + + F + G+ Sbjct: 227 DTKYEKYKFDTIADNENLNVSAKGGWVAMLQQYFATAWVPNNDGVNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ T + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGTLGSTLWVGPEIQNKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIAAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGITMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSREKKK 547 >gi|157144347|ref|YP_001451666.1| putative inner membrane protein translocase component YidC [Citrobacter koseri ATCC BAA-895] gi|166975859|sp|A8ACL7|OXAA_CITK8 RecName: Full=Inner membrane protein oxaA gi|157081552|gb|ABV11230.1| hypothetical protein CKO_00051 [Citrobacter koseri ATCC BAA-895] Length = 548 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 142/589 (24%), Positives = 260/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ S P L + + Sbjct: 49 DQGVPASGQGKLITVKTDVLDLTINTRGGDVEQALLPTYPKELGSKEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTIS 173 Y A+ N + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYSVDNDTFVLADGQNELHVPMTWTDAAGNTFTKTFV 166 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + +V N + S G++ + T ++ F + G Sbjct: 167 LKRGEYAVNVNYSVQNAGEKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N + W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSNGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKS 547 >gi|332288922|ref|YP_004419774.1| putative inner membrane protein translocase component YidC [Gallibacterium anatis UMN179] gi|330431818|gb|AEC16877.1| putative inner membrane protein translocase component YidC [Gallibacterium anatis UMN179] Length = 540 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 153/574 (26%), Positives = 261/574 (45%), Gaps = 52/574 (9%) Query: 1 ME--RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ R+ + +S +I W+ + QT ++V + + Sbjct: 1 MDSRRSLLVIALLFISFLIYQQWEIDNNP------QPAQTATQTQVDKSEVPTTVSTAAN 54 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + L++ L I+ G + L Y ++ S +P L + + Sbjct: 55 TTIDNNQQQGKIITLQSDVLRLKIDTLGGDIVEAQLLKYGAELHSETPFALL--KNTPQQ 112 Query: 119 AYFAELDYVST------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ + A + + L G+ + F + + + + Sbjct: 113 VYIAQSGLIGANGSDTVAGRADYQVEGDNFTLAEGQ---NELSVPFTFT-KDGVTYRKIF 168 Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLV 230 +L + Y K+ VTNNS I+ P ++ +++ N G + + Sbjct: 169 TLSRNSYDVKVNYEVTNNSGATIQVQPYAQLKHTLVESSGNIAMPTYTGGAYSSSETNYK 228 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + D++K +++ W I Y+ S +IP+++ D F Sbjct: 229 KYSFEDMQKENLA-IKTKQGWAAILQHYFVSAWIPNQDADNQLYTSTQGDFAY---IGFR 284 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 +I G + T ++ L+ G K + P ++ +D+GW +FIAKP+F L+ Sbjct: 285 GPVTSIANGATDTISSQLWVGPKLQNEMETV-----APHLDLTVDYGWAWFIAKPLFWLL 339 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + +LV N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+RE+F Q Sbjct: 340 QFIQSLVHNWGLAIIGVTIVVKAILYPLTKAQYTSMAKMRMLQPKIQEMRERFGDD-RQR 398 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 399 MSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDP 458 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I P++M SMF+ KMSP P AD Q ++ +MPV+F F Sbjct: 459 YYIL-------------------PLLMGASMFLLQKMSPTPVADPMQQKVMMFMPVMFTF 499 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+I+IVQQ +I + + Sbjct: 500 FFLWFPSGLVLYWLVSNLITIVQQQLIYRGLEKK 533 >gi|229530208|ref|ZP_04419597.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 12129(1)] gi|229332341|gb|EEN97828.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 12129(1)] Length = 541 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 148/572 (25%), Positives = 256/572 (44%), Gaps = 45/572 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + + + L SI+ G L Y +++S V L + + + Sbjct: 60 VA---AKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I++ ++N +S T I + ++ AN I + +T L Sbjct: 115 IAQSGLVGPQG-IDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQ-ANGIDYTKTFILK 172 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y +V V NNS + + ++ + N G D + Sbjct: 173 RGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYS 232 Query: 234 YSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S ++ + +W+ + Y+AS +IP E + +++ Sbjct: 233 FDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTP 289 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 290 NKTIANGDKAEFEATLWVGPKLQDQMAA-----TAPNLDLVVDYGWLWFIAKPLHWLLSV 344 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 345 IQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMS 403 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 404 QEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY 463 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 IL-------------------PLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFF 504 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 505 LWFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|205354571|ref|YP_002228372.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859068|ref|YP_002245719.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|254773021|sp|B5QUQ4|OXAA_SALEP RecName: Full=Inner membrane protein oxaA gi|254773022|sp|B5RFY3|OXAA_SALG2 RecName: Full=Inner membrane protein oxaA gi|205274352|emb|CAR39377.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710871|emb|CAR35235.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326629707|gb|EGE36050.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 548 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 146/589 (24%), Positives = 260/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + +V N + S G++ + T ++ F + G Sbjct: 167 FKRGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|308188769|ref|YP_003932900.1| Inner membrane protein yidC [Pantoea vagans C9-1] gi|308059279|gb|ADO11451.1| Inner membrane protein yidC [Pantoea vagans C9-1] Length = 548 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 149/589 (25%), Positives = 255/589 (43%), Gaps = 58/589 (9%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ L + +I AWQ + Q Q NS A Sbjct: 1 MDSQRNLFLIAFLFVTFMIWQAWQTDH------------APQPQQTQTTQGTNSVAGDTA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + +K L +IN +G + L + + S+ P L + Sbjct: 49 SQGVPASGQGQTITVKTDVLSLNINTRGGDVEQAQLLTFPDKLGSDQPFQLL--ETTPAF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ NN P T + + + + N +++ +T Sbjct: 107 LYQAQSGLTGRNGPDNPNNGARPLFTTAQDHFEMADGQSELRVPMTYTAENGVVYTKTFI 166 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + V N + + S G++ + T +N F + G Sbjct: 167 FKRGEYAVNVDYHVNNTTQQPLEVSLFGQLKQTIDLPKHRDTGSNNFALHTFRGAAYSTS 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + K+ I + N SN W+ + +Y+A+ ++P E + L +G A Sbjct: 227 ESKYEKYKFDTIADNENLNATTSNGWVAMLQQYFATAWVPRTEGTNTLYTSNLGNGVA-- 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI G L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSAPVTIAAGAQQNLGATLWVGPEIQDKMAAI-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL Sbjct: 400 DK-QKQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFILWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGITMFFIQKMSPTTVTDPMQQKIMTYMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 547 >gi|161505628|ref|YP_001572740.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189036359|sp|A9MJT7|OXAA_SALAR RecName: Full=Inner membrane protein oxaA gi|160866975|gb|ABX23598.1| hypothetical protein SARI_03804 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 548 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 145/589 (24%), Positives = 260/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ S+ P L + + Sbjct: 49 DQGVPASGQGKLITVKTDVLDLTINTRGGDVEQALLPAYPKELGSSEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + +V N + S G++ + T ++ F + G Sbjct: 167 FKRGDYAVNVNYSVQNTGEKPLEISTFGQLKQSINLPPHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKN 547 >gi|198243281|ref|YP_002217791.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|254773020|sp|B5FN13|OXAA_SALDC RecName: Full=Inner membrane protein oxaA gi|197937797|gb|ACH75130.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 548 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 143/574 (24%), Positives = 254/574 (44%), Gaps = 57/574 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + +V N + S G++ + T ++ F + G Sbjct: 167 FKRGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|330831724|ref|YP_004394676.1| inner membrane protein oxaA [Aeromonas veronii B565] gi|328806860|gb|AEB52059.1| Inner membrane protein oxaA [Aeromonas veronii B565] Length = 548 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 143/577 (24%), Positives = 257/577 (44%), Gaps = 49/577 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + QT + + + + Sbjct: 1 MESQRNLLL-IGLLFVSFLLWQQWESDKAPKP--APTTVAQTEHFVPEAGQTGDIPQVSE 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +A A + + + + L +++ +G L + L+ + P V L S ++ Y Sbjct: 58 QANATAARKLITVSSDVLKLTLDTQGGDVVSAELLSHKLEEGKDQPFVLLTSK--PEHLY 115 Query: 121 FAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ V + T + L G+ + + + ++ ++F + Sbjct: 116 IAQSGLVGRNGPDSQAEGRPTYEAAQTSYQLADGQ---DQVVVPMTWTDSKGVVFTKEFI 172 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGV---QEGFIAVLGDK 227 L Y + + N S + ++ G++ + P+ V G D Sbjct: 173 LKRGDYAVGVDYKIDNKSAEPVQVQFYGQLKQTVATPKDQEGHAMVASAYRGGAFSTEDT 232 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + +++ + + N W+ + Y+ S + P+ + + +S + + G + Sbjct: 233 RYKKYTFDEMKDADL-NKTTKGGWVAMLQHYFVSAWAPNADDT-NSFYSRVIPGKGQAII 290 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + G+ T+ L+ G K + ++ +D+GW +FIA+P+ Sbjct: 291 GYKAPLVDVAAGQQAEVTSKLWVGPKLQDQMAKVAN-----HLDLTVDYGWLWFIAQPLH 345 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L++ F+ V N+G+AI++ T+ V+ + FPL K QY S A M+ +QPKI LRE+F Sbjct: 346 WLLTVFHGFVQNWGLAIIMLTLLVRGIMFPLTKAQYTSMAKMRMLQPKIAALRERFGDD- 404 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M++LYK +NPL GC PIL+Q+P+F A+Y + S+E+RHAPF WI DL+ Sbjct: 405 RQKMSQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWALMESVELRHAPFALWITDLSV 464 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP + PI+M SM+ KMSP D Q ++ +MP++ Sbjct: 465 KDPFFVL-------------------PILMGASMWYLQKMSPTTVTDPMQQKVMQFMPII 505 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F F FPAGL +YW SNVISI+QQ +I + + Sbjct: 506 FTFMFLWFPAGLTLYWLVSNVISIIQQTIIYRQLEKK 542 >gi|295095341|emb|CBK84431.1| protein translocase subunit yidC [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 547 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 146/587 (24%), Positives = 261/587 (44%), Gaps = 55/587 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A ++ +K L +IN +G + L Y ++ S P L + + Y Sbjct: 50 GVPASGQGKQITVKTDVLELTINTRGGDVEQALLLTYPKELKSTEPFQLL--ETTPEFIY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ N + I + + +A F +T +L Sbjct: 108 QAQSGLTGRDGPDNPANGARPLYNVENDTFVLADGQNELVIPMTYTDAAGNTFTKTFTLK 167 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDK 227 Y + +V N + S G++ + T ++ F + G D Sbjct: 168 RGEYAVNVGYSVQNAGAKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDT 227 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ ++P+ + + + F + G+ Sbjct: 228 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWVPNNDGTNN--FYTANLGNGIAAI 285 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 286 GYKSQPVLVQPGQTGKLASTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLF 340 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 KLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 400 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 401 -QRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 459 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 460 QDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 500 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 501 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 546 >gi|5932359|gb|AAD56912.1|AF180145_4 60KD inner-membrane protein yidC [Zymomonas mobilis subsp. mobilis ZM4] Length = 579 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 175/585 (29%), Positives = 295/585 (50%), Gaps = 11/585 (1%) Query: 1 ME---RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + N + LS +I++ W F + + + + Sbjct: 1 MDDKHQQRNLVIVTILSALILFGWS-FVTKHWLSTPPAPTQQGKNQPKAELTAEESGDKP 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + Q L +PR+ + S+ GS+NLKG + DDL L + ++ NSP V L SP+ T+ Sbjct: 60 LKPVDQVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTE 119 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 NA+F + T N+ LPN++++W S K LT P+ + N + T+ +D Sbjct: 120 NAWFTSFGW--TGENVALPNADSLWKADSDK-LTADHPVNFYWNNQQGQILRITLCVDHD 176 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+F ++V N + P +++ + G I V ++DI Sbjct: 177 YMFNATESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADI 236 Query: 238 EK--SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +K ++ + W+G SDKYW + P + S + YQA F+ + Sbjct: 237 DKATNNSIRNNTQGGWIGFSDKYWLTALAPH-NQKIAIDTDFRSSSNHHYQADFTVAPVV 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + GK+ +T+ +FAGAKE + Y L +P F+ IDWGWF I K F + + + Sbjct: 296 VAAGKTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFL 355 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L ++ L FP+A KQY S A+M+ +QPK+ +RE++K ++ Q + Sbjct: 356 HVGNYGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEARMRQ-EL 414 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY+ +NP AGC P+ +Q P+F A+YK + +++E RH PF WIKDL+A DP F Sbjct: 415 VTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFN 474 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+L F P F+ +G+ PII+ ++M++Q + SP + Q I++++P++ V ++ Sbjct: 475 LFGLLHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLA 534 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 AGL +Y+ ++N+IS+ Q + H DR + Sbjct: 535 AGLQVYYIFNNLISLAQMMWLQHRHSTPEERQDRAERKRPSKKKA 579 >gi|15640036|ref|NP_062588.1| putative inner membrane protein translocase component YidC [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591471|ref|ZP_01678744.1| inner membrane protein, 60 kDa [Vibrio cholerae 2740-80] gi|147674272|ref|YP_001218407.1| putative inner membrane protein translocase component YidC [Vibrio cholerae O395] gi|153212974|ref|ZP_01948568.1| inner membrane protein, 60 kDa [Vibrio cholerae 1587] gi|153821953|ref|ZP_01974620.1| inner membrane protein, 60 kDa [Vibrio cholerae B33] gi|227080241|ref|YP_002808792.1| putative Inner membrane protein [Vibrio cholerae M66-2] gi|229508291|ref|ZP_04397795.1| OxaI/YidC membrane insertion protein [Vibrio cholerae BX 330286] gi|229508870|ref|ZP_04398361.1| OxaI/YidC membrane insertion protein [Vibrio cholerae B33] gi|229606565|ref|YP_002877213.1| inner membrane protein translocase component YidC [Vibrio cholerae MJ-1236] gi|254851570|ref|ZP_05240920.1| inner membrane protein oxaA [Vibrio cholerae MO10] gi|255746812|ref|ZP_05420758.1| OxaI/YidC membrane insertion protein [Vibrio cholera CIRS 101] gi|262155892|ref|ZP_06029014.1| OxaI/YidC membrane insertion protein [Vibrio cholerae INDRE 91/1] gi|262167094|ref|ZP_06034809.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC27] gi|298501190|ref|ZP_07010989.1| inner membrane protein [Vibrio cholerae MAK 757] gi|38503195|sp|Q9KVY4|OXAA_VIBCH RecName: Full=Inner membrane protein oxaA gi|172047497|sp|A5F484|OXAA_VIBC3 RecName: Full=Inner membrane protein oxaA gi|254778170|sp|C3LP77|OXAA_VIBCM RecName: Full=Inner membrane protein oxaA gi|9654395|gb|AAF93182.1| inner membrane protein, 60 kDa [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546673|gb|EAX56855.1| inner membrane protein, 60 kDa [Vibrio cholerae 2740-80] gi|124116200|gb|EAY35020.1| inner membrane protein, 60 kDa [Vibrio cholerae 1587] gi|126520492|gb|EAZ77715.1| inner membrane protein, 60 kDa [Vibrio cholerae B33] gi|146316155|gb|ABQ20694.1| inner membrane protein, 60 kDa [Vibrio cholerae O395] gi|227008129|gb|ACP04341.1| putative Inner membrane protein [Vibrio cholerae M66-2] gi|227011993|gb|ACP08203.1| putative Inner membrane protein [Vibrio cholerae O395] gi|229354145|gb|EEO19077.1| OxaI/YidC membrane insertion protein [Vibrio cholerae B33] gi|229354564|gb|EEO19486.1| OxaI/YidC membrane insertion protein [Vibrio cholerae BX 330286] gi|229369220|gb|ACQ59643.1| OxaI/YidC membrane insertion protein [Vibrio cholerae MJ-1236] gi|254847275|gb|EET25689.1| inner membrane protein oxaA [Vibrio cholerae MO10] gi|255735569|gb|EET90968.1| OxaI/YidC membrane insertion protein [Vibrio cholera CIRS 101] gi|262024480|gb|EEY43166.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC27] gi|262030344|gb|EEY48986.1| OxaI/YidC membrane insertion protein [Vibrio cholerae INDRE 91/1] gi|297540062|gb|EFH76124.1| inner membrane protein [Vibrio cholerae MAK 757] Length = 541 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 148/572 (25%), Positives = 255/572 (44%), Gaps = 45/572 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + + + L SI+ G L Y +++S V L + + + Sbjct: 60 VA---AKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I++ ++N +S T I + ++ AN I + +T L Sbjct: 115 IAQSGLVGPQG-IDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQ-ANGIDYTKTFILK 172 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y +V V NNS + + ++ + N G D + Sbjct: 173 RGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYS 232 Query: 234 YSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S ++ + +W+ + Y+AS +IP E + +++ Sbjct: 233 FDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTP 289 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 290 NKTIANGDKAEFEATLWVGPKLQDQMAA-----TAPNLDLVVDYGWLWFIAKPLHWLLSV 344 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 345 IQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMS 403 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 404 QEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY 463 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 IL-------------------PLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFF 504 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 505 LWFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|261823805|ref|YP_003261911.1| inner membrane protein translocase component YidC [Pectobacterium wasabiae WPP163] gi|261607818|gb|ACX90304.1| membrane protein insertase, YidC/Oxa1 family domain containing [Pectobacterium wasabiae WPP163] Length = 543 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 145/584 (24%), Positives = 258/584 (44%), Gaps = 53/584 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E N Q ++Q N+ + Sbjct: 1 MDSQRNLLL-IALLFVTFMLWQAW------ETDKNPPATTQAIQQ---ATNAVTGDATNQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + +L Y + S+ P L + + Y Sbjct: 51 GVPASGQGKLITVKTDVLSLTINTRGGDVEQAHLLAYPDTLGSDKPFHLL--ETTPEFVY 108 Query: 121 FAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 A+ N P T + I + + A+ + + +T L Sbjct: 109 QAQSGLTGKNGPDNPANGPRPLFTTTQDSFELADGQSELRIPMTYTAADGVTYTKTFVLK 168 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 Y + +V N S + + G++ + T ++ F + A Sbjct: 169 RGDYALNVDYSVNNTSAQPLELTLFGQLKQSTELPKHRDTGSSNFALHTYRGAAFSSSED 228 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS + N ++ W+ + +Y+A+ +IP T+ + + S + + F Sbjct: 229 KYKKYSFGDMDEGLNITTNSGWVAMLQQYFATAWIP---TTAGANTFFTSKDNGQAAIGF 285 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 A + + G L+ G + + P ++ +D+GW +FI++P+F L Sbjct: 286 KATPVVVAAGSQQNLNATLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLFKL 340 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 341 LKFLHGFIGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKLQAMRERIGDDK-Q 399 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 400 RMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 460 PYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 500 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 501 VFFLWFPSGLVMYYIVSNMVTILQQQLIYR-GLEKRGLHSREKK 543 >gi|167995355|ref|ZP_02576445.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205326982|gb|EDZ13746.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|332990692|gb|AEF09675.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 548 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 146/589 (24%), Positives = 259/589 (43%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNEMQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + +V N + S G++ + T ++ F + G Sbjct: 167 FKRGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|222475049|ref|YP_002563464.1| 60kD inner-membrane protein (yidC) [Anaplasma marginale str. Florida] gi|255004151|ref|ZP_05278952.1| putative inner membrane protein translocase component YidC [Anaplasma marginale str. Virginia] gi|56387916|gb|AAV86503.1| 60 kD inner-membrane protein [Anaplasma marginale str. St. Maries] gi|222419185|gb|ACM49208.1| 60kD inner-membrane protein (yidC) [Anaplasma marginale str. Florida] Length = 647 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 191/577 (33%), Positives = 316/577 (54%), Gaps = 15/577 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ SV ++ W+ Y ++E +++ + + + + + Sbjct: 76 MSEARNLVLAVVASVAVMVGWRFVYERVLVKEYPQQQREVVSE---SLIPEAMDVAEYRP 132 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 R A++ PRV L N S+ SI+LKGA DD++L Y + +S V L+SP T+ Sbjct: 133 RVDAINSVPRVRLGNTSVRASISLKGALVDDVSLTKYQVSTDKHSENVVLMSPEGTREDS 192 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E ++ + ++P+ NT+W + G + L + N ++F S+D Y+F Sbjct: 193 IVEFGWIDPEHKTKVPDKNTLWEVEQGSEASGEGSATLRWDNGQGLVFRLRFSIDRAYMF 252 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + V N++ + +R S GRI + Q + + EG I G L E Y D++K Sbjct: 253 SVSQEVENSTGEDLRLSYYGRINKAHAQDGKSYWISHEGAIGSFG-HGLQEWTYKDMQKG 311 Query: 241 SISNFHESN-----SWLGISDKYWASVFIPSKET-SFHSQFKYLSDGH-ARYQAKFSANE 293 S + +N W+G++DKYW + +PS + + K++ +Q FS + Sbjct: 312 SGARVGATNEGTGSHWIGLADKYWFTALVPSSDKGKLAFRAKHVPRNDVDHFQVDFSRSY 371 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 TI G +T LF GAKE + +Y L IP F+ +D+G YFI KP+F L+ YF Sbjct: 372 GTIPAGGKAESTTQLFIGAKELAVLDNYRSGLNIPLFDKAVDFGVLYFITKPVFQLLQYF 431 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + +VGNFG+AI++ T+ +KL+ FPL+ K YVS +K +QP+I +RE K + + K Sbjct: 432 HKVVGNFGLAIVMLTIAIKLVVFPLSSKSYVSMFKLKKLQPEISRIRELHKTDDVR-ISK 490 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 + L++ H ++P++G PIL+QIPVFFA+YKV+ +++EMRHAP + WI+DL++ D N+ Sbjct: 491 EISALFRKHGVSPMSGFLPILVQIPVFFALYKVLFVTIEMRHAPLFAWIQDLSSHDTANL 550 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-ILNWMPVVFVFALS 532 LFG+L F P + VG+ PII+ ++M +Q K++ ++ ++P VFVF S Sbjct: 551 LNLFGLLRFEPP--ICVGVLPIILGITMVLQQKINQQDQATQDPYGVMKFLPYVFVFIFS 608 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 SFPAGL++YW SNVI+++QQ + + L++ Sbjct: 609 SFPAGLVLYWICSNVITMLQQLFVRRFIFDRRDLVNN 645 >gi|260581921|ref|ZP_05849717.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus influenzae NT127] gi|260095114|gb|EEW79006.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus influenzae NT127] Length = 541 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 153/576 (26%), Positives = 270/576 (46%), Gaps = 55/576 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSMTATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y ++ S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ +++ N G + + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + +SD++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFSDMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + +TI G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGPVVTIPAGSQETITSSLWTGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+MP+VF Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +F FP+GL++YW SN+I+I QQ +I + + Sbjct: 499 MFFFLWFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|255003028|ref|ZP_05277992.1| putative inner membrane protein translocase component YidC [Anaplasma marginale str. Puerto Rico] Length = 647 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 191/577 (33%), Positives = 316/577 (54%), Gaps = 15/577 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ SV ++ W+ Y ++E +++ + + + + + Sbjct: 76 MSEARNLVLAVVASVAVMVGWRFVYERVLVKEYPQQQREVVSE---SLIPEAMDVAEYRP 132 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 R A++ PRV L N S+ SI+LKGA DD++L Y + +S V L+SP T+ Sbjct: 133 RVDAINSVPRVRLGNTSVRASISLKGALVDDVSLTKYQVSTDKHSENVVLMSPEGTREDS 192 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E ++ + ++P+ NT+W + G + L + N ++F S+D Y+F Sbjct: 193 IVEFGWIDPEHKTKVPDKNTLWEVEQGSEASGEGSATLRWDNGQGLVFRLRFSIDRAYMF 252 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + V N++ + +R S GRI + Q + + EG I G L E Y D++K Sbjct: 253 SVSQEVENSTGEDLRLSYYGRINKAHAQDGKSYWISHEGAIGSFG-HGLQEWTYKDMQKG 311 Query: 241 SISNFHESN-----SWLGISDKYWASVFIPSKET-SFHSQFKYLSDGH-ARYQAKFSANE 293 S + +N W+G++DKYW + +PS + + K++ +Q FS + Sbjct: 312 SGARVGATNEGTGSHWIGLADKYWFTALVPSSDKGKLAFRAKHVPRNDVDHFQVDFSRSY 371 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 TI G +T LF GAKE + +Y L IP F+ +D+G YFI KP+F L+ YF Sbjct: 372 GTIPAGGKAESTTQLFIGAKELAVLDNYRSGLNIPLFDKAVDFGVLYFITKPVFQLLQYF 431 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + +VGNFG+AI++ T+ +KL+ FPL+ K YVS +K +QP+I +RE K + + K Sbjct: 432 HKVVGNFGLAIVMLTIAIKLVVFPLSSKSYVSMFKLKKLQPEISRIRELHKTDDVR-ISK 490 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 + L++ H ++P++G PIL+QIPVFFA+YKV+ +++EMRHAP + WI+DL++ D N+ Sbjct: 491 EISALFRKHGVSPMSGFLPILVQIPVFFALYKVLFVTIEMRHAPLFAWIQDLSSHDTANL 550 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-ILNWMPVVFVFALS 532 LFG+L F P + VG+ PII+ ++M +Q K++ ++ ++P VFVF S Sbjct: 551 LNLFGLLRFEPP--ICVGVLPIILGITMVLQQKINQQDQATQDPYGVMKFLPYVFVFIFS 608 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 SFPAGL++YW SNVI+++QQ + + L++ Sbjct: 609 SFPAGLVLYWICSNVITMLQQLFVRRFIFDRRDLVNN 645 >gi|261341634|ref|ZP_05969492.1| hypothetical protein ENTCAN_08100 [Enterobacter cancerogenus ATCC 35316] gi|288315989|gb|EFC54927.1| membrane protein insertase, YidC/Oxa1 family [Enterobacter cancerogenus ATCC 35316] Length = 547 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 146/587 (24%), Positives = 261/587 (44%), Gaps = 55/587 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A ++ +K L +IN +G + L Y ++ S P L + + Y Sbjct: 50 GVPASGQGKQITVKTDVLELTINTRGGDVEQALLLTYPKELKSTEPFQLL--ETTPEFIY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ N + I + + +A F +T +L Sbjct: 108 QAQSGLTGRDGPDNPANGARPLYNVDSDTFVLADGQNEIAIPMTYTDAAGNTFTKTFTLK 167 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDK 227 Y + +V N + S G++ + T ++ F + G D Sbjct: 168 RGEYAVNVGYSVQNAGEKPLELSTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDT 227 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ ++P+ + + + F + G+ Sbjct: 228 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWVPNNDGTNN--FYTANLGNGIAAI 285 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 286 GYKSQPVLVQPGQTGKLASTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLF 340 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 KLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIAAMRERLGDDK 400 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 401 -QRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 459 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 460 QDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 500 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 501 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 546 >gi|229846058|ref|ZP_04466170.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 7P49H1] gi|229811062|gb|EEP46779.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 7P49H1] Length = 541 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 153/576 (26%), Positives = 270/576 (46%), Gaps = 55/576 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSITATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y ++ S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ +++ N G D + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSDTN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + ++D++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFADMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + +TI G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGPVVTIPAGSQETITSSLWTGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+MP+VF Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +F FP+GL++YW SN+I+I QQ +I + + Sbjct: 499 MFFFLWFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|322716820|gb|EFZ08391.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 548 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 146/589 (24%), Positives = 259/589 (43%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTHGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + +V N + S G++ + T ++ F + G Sbjct: 167 FKRGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTSAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|309973500|gb|ADO96701.1| Inner membrane translocation protein YidC [Haemophilus influenzae R2846] Length = 541 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 153/576 (26%), Positives = 270/576 (46%), Gaps = 55/576 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSITATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y ++ S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ +++ N G D + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSDTN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + ++D++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFADMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + +TI G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGPVVTIPSGSQETITSSLWTGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+MP+VF Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +F FP+GL++YW SN+I+I QQ +I + + Sbjct: 499 MFFFLWFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|16272937|ref|NP_439163.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae Rd KW20] gi|260580091|ref|ZP_05847921.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus influenzae RdAW] gi|1168226|sp|P44973|OXAA_HAEIN RecName: Full=Inner membrane protein oxaA gi|1574032|gb|AAC22663.1| inner membrane protein, 60 kDa (yidC) [Haemophilus influenzae Rd KW20] gi|260093375|gb|EEW77308.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus influenzae RdAW] Length = 541 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 153/576 (26%), Positives = 271/576 (47%), Gaps = 55/576 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSITATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y ++ S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ +++ N G + + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + +SD++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFSDMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + + +TI G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGSVVTIPAGSQETITSSLWTGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+MP+VF Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +F FP+GL++YW SN+I+I QQ +I + + Sbjct: 499 MFFFLWFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|229524907|ref|ZP_04414312.1| OxaI/YidC membrane insertion protein [Vibrio cholerae bv. albensis VL426] gi|229338488|gb|EEO03505.1| OxaI/YidC membrane insertion protein [Vibrio cholerae bv. albensis VL426] Length = 541 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 147/572 (25%), Positives = 257/572 (44%), Gaps = 45/572 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPVQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + + + L SI+ G L Y +++S V L + + + Sbjct: 60 VA---AKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I++ ++N +S T I + ++ AN I + +T L Sbjct: 115 IAQSGLVGPQG-IDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQ-ANGIDYTKTFILK 172 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y +V V NNS + + ++ + N G D + Sbjct: 173 RGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYS 232 Query: 234 YSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S ++ + +W+ + Y+AS +IP E + +++ Sbjct: 233 FDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQTQLYSRVINNLGD---MGIRTP 289 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 290 NKTIANGDKAEFEATLWVGPKLQEQMAAV-----APHLDLVVDYGWLWFIAKPLHWLLSV 344 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++V N+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 345 IQSVVINWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMS 403 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 404 QEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY 463 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 IL-------------------PLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFF 504 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 505 LWFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|319897488|ref|YP_004135685.1| inner membrane protein oxaa [Haemophilus influenzae F3031] gi|317432994|emb|CBY81365.1| Inner membrane protein oxaA [Haemophilus influenzae F3031] Length = 541 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 153/576 (26%), Positives = 271/576 (47%), Gaps = 55/576 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSITATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y +++S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELNSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRSGRAQYQVEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ +++ N G + + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + +SD++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFSDMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + +TI G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGPVVTIPAGSQETITSSLWTGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+MP+VF Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +F FP+GL++YW SN+I+I QQ +I + + Sbjct: 499 MFFFLWFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|188535565|ref|YP_001909362.1| putative inner membrane protein translocase component YidC [Erwinia tasmaniensis Et1/99] gi|254772784|sp|B2VCE6|OXAA_ERWT9 RecName: Full=Inner membrane protein oxaA gi|188030607|emb|CAO98502.1| Inner membrane protein OxaA [Erwinia tasmaniensis Et1/99] Length = 548 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 149/592 (25%), Positives = 256/592 (43%), Gaps = 64/592 (10%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ L S +I AWQ + Q Q S A + Sbjct: 1 MDSQRNLFLIAFLFVSFMIWQAWQTDNAPQPL------------QTQTTQNTTSAAGDAV 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + A + +K L +IN +G D L Y + S+ P LL S Sbjct: 49 NQGVPASGQGKTITVKTDVLSLNINTRGGDIDQAQLLTYPDKLGSDQPF--LLLESTPGF 106 Query: 119 AYFAELDYVS--------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 Y A+ + + L +G+ I L F N + + + Sbjct: 107 LYQAQSGLTGRNGPDNPANGARPLYTSGQDHFELANGQ---GELRIPLTFTAENGVTYTK 163 Query: 171 TISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIA 222 T L Y + + N + + S G++ + T ++ F + G Sbjct: 164 TFVLKRGEYAIGVDYQINNTTQQPLEVSMFGQLKQTIDLPKHRDTGSSNFALHTFRGAAY 223 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + + K+ I + + +N W+ + +Y+A+ ++P S L +G Sbjct: 224 SSSETNYEKYKFDTIRDNENLSTTTNNGWVAMLQQYFATAWVPQTAGSNTLYTSNLGNGV 283 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 A + + + + G L+ G + + P ++ +D+GW +FI Sbjct: 284 A--AIGYKSAPVIVAAGSQQQLAATLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFI 336 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 ++P+F L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 337 SQPLFKLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRER 396 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI Sbjct: 397 LGDDK-QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWI 455 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521 DLAA DP I PI+M ++MF KMSP D Q I+ Sbjct: 456 HDLAAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMT 496 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +MPV+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 497 FMPVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 547 >gi|145637306|ref|ZP_01792967.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittHH] gi|145269558|gb|EDK09500.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittHH] Length = 541 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 153/576 (26%), Positives = 269/576 (46%), Gaps = 55/576 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSITATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y ++ S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ + + N G D + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIVENSGNVAMPTYTGGAYSSSDTN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + ++D++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFADMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + +TI G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGPVVTIPSGSQETITSSLWTGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+MP+VF Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +F FP+GL++YW SN+I+I QQ +I + + Sbjct: 499 MFFFLWFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|296105489|ref|YP_003615635.1| putative inner membrane protein translocase component YidC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059948|gb|ADF64686.1| putative inner membrane protein translocase component YidC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 546 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 144/587 (24%), Positives = 256/587 (43%), Gaps = 56/587 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E+ +Q S D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW-----------EQDKNPQPQQQTTQTTSSQGSAADQ 48 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A ++ +K L +IN +G + L Y ++ S P L + + Y Sbjct: 49 GVPASGQGKQITVKTDVLELTINTRGGDVEQALLLTYPKELKSTEPFQLL--ETTPEFIY 106 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ N + I + + +A F +T +L Sbjct: 107 QAQSGLTGRDGPDNPANGARPLYNVENDTFVLADGQNELVIPMTYTDAAGNTFTKTFTLK 166 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDK 227 Y + +V N + S G++ + T ++ F + G D Sbjct: 167 RGEYAVNVGYSVQNAGAKPLEVSTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDA 226 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP+ + + + F + G Sbjct: 227 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPNNDGTNN--FYTANLGKGIAAI 284 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 285 GYKSQPVLVQPGQTGKLASTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLF 339 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 KLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 399 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 400 -QRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 458 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 459 QDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 499 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 545 >gi|145630098|ref|ZP_01785880.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae R3021] gi|144984379|gb|EDJ91802.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae R3021] Length = 541 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 151/576 (26%), Positives = 269/576 (46%), Gaps = 55/576 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSITATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y ++ S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ +++ N G + + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + +SD++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFSDMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + +TI G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGPVVTIPSGSQETITSSLWTGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+MP++F Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + FP+GL++YW SN+I+I QQ +I + + Sbjct: 499 MVFFLWFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|68249585|ref|YP_248697.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 86-028NP] gi|229843940|ref|ZP_04464081.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 6P18H1] gi|81335986|sp|Q4QLR0|OXAA_HAEI8 RecName: Full=Inner membrane protein oxaA gi|68057784|gb|AAX88037.1| preprotein translocase subunit YidC [Haemophilus influenzae 86-028NP] gi|229812934|gb|EEP48622.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 6P18H1] Length = 541 Score = 478 bits (1231), Expect = e-132, Method: Composition-based stats. Identities = 152/576 (26%), Positives = 270/576 (46%), Gaps = 55/576 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSITATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y ++ S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ +++ N G + + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + ++D++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFADMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + +TI G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGPVVTIPAGSQETITSSLWTGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+MP+VF Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +F FP+GL++YW SN+I+I QQ +I + + Sbjct: 499 MFFFLWFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|37528712|ref|NP_932057.1| putative inner membrane protein translocase component YidC [Photorhabdus luminescens subsp. laumondii TTO1] gi|36788151|emb|CAE17278.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 546 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 146/589 (24%), Positives = 266/589 (45%), Gaps = 57/589 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + N + +Q +Q + + AV Sbjct: 1 MDSQRNLLL-IALLFVSFLVWQAW-----EADKNPQPTTVQATQQTDMPSSENQAVPGS- 53 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L +IN +G ++ +L Y + SN P L + Y Sbjct: 54 -----GKGKLITVKTDVLSLTINTRGGDIEEADLLAYPDTLGSNQPFKLL--ETTPAFTY 106 Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD 175 A+ + + + ++ + I + F N I++ +T L Sbjct: 107 QAQSGLTGKDGPDNPMNSERPLYTAAQDSYVLADGQDELRIPMNFVTKNGIVYVKTFVLK 166 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG--DK 227 Y + + N + ++ + G++ + T ++ F + A D Sbjct: 167 RGEYAISVDYRIHNTTEKPLQMTFFGQLKQSVELPKHRDTGSSNFALHTYRGAAYSSDDT 226 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + +SDIE S+S W+ + +Y+A+ ++P S F ++ G Sbjct: 227 KYKKYSFSDIEGESLS-VTTKGGWIAMLQQYFATAWVPVANE--TSTFYTVALGKEMAAI 283 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + I++ T ++ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 284 GYKSAPISVAANSEKTVSSTLWIGPEIQDEMAAV-----APHLDLSVDYGWLWFISQPLF 338 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 339 KLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK 398 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF GWI DL+A Sbjct: 399 -QRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFAGWIHDLSA 457 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I P++M ++MFI KMSP D Q I+ +MPV+ Sbjct: 458 QDPYYIL-------------------PLLMGVTMFIIQKMSPTTITDPMQQKIMTYMPVI 498 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 499 FTIFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKPAK 546 >gi|229517141|ref|ZP_04406587.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC9] gi|229346204|gb|EEO11176.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC9] Length = 541 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 148/572 (25%), Positives = 254/572 (44%), Gaps = 45/572 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + + + L SI+ G L Y +++S V L + + + Sbjct: 60 VA---AKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I++ ++N +S T I + ++ AN I + +T L Sbjct: 115 IAQSGLVGPQG-IDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQ-ANGIDYTKTFILK 172 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y +V V NNS + + ++ + N G D + Sbjct: 173 RGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYS 232 Query: 234 YSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S ++ + +W+ + Y+AS +IP E + +++ Sbjct: 233 FDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTP 289 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 290 NKTIANGDKAEFEATLWVGPKLQDQMAA-----TAPNLDLVVDYGWLWFIAKPLHWLLSV 344 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 345 IQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMS 403 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 404 QEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY 463 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P+ M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 IL-------------------PLQMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFF 504 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 505 LWFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|327482918|gb|AEA77325.1| Inner membrane protein translocase component YidC, long form [Vibrio cholerae LMA3894-4] Length = 541 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 148/572 (25%), Positives = 255/572 (44%), Gaps = 45/572 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQAIQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + + + L SI+ G L Y +++S V L + + + Sbjct: 60 VA---AKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I++ ++N +S T I + ++ AN I + +T L Sbjct: 115 IAQSGLVGPQG-IDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQ-ANGIDYTKTFILK 172 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y +V V NNS + + ++ + N G D + Sbjct: 173 RGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYS 232 Query: 234 YSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S ++ + +W+ + Y+AS +IP E + +++ Sbjct: 233 FDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTP 289 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 290 NKTITNGDKAEFEATLWVGPKLQDQMAA-----TAPNLDLVVDYGWLWFIAKPLHWLLSV 344 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 345 IQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMS 403 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 404 QEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY 463 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 IL-------------------PLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFF 504 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 505 LWFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|329297777|ref|ZP_08255113.1| membrane protein insertase [Plautia stali symbiont] Length = 548 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 146/589 (24%), Positives = 255/589 (43%), Gaps = 58/589 (9%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ L S +I AWQ + P+ + + S A Sbjct: 1 MDSQRNLFLIAFLFVSFMIWQAWQTDHA-PQPQHTQTTQNTS-----------SAAGDAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + +K L +IN +G + L Y + S++P L + Sbjct: 49 SSGVPASGQGKTITVKTDVLSLNINTRGGDIEQAQLLTYPDKLGSDAPFQLL--ETTPAF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ NN P + + L + N +++ +T Sbjct: 107 VYQAQSGLTGRNGPDNPNNGARPLYTASLDHFEMADGQTELRVPLSWTGENGVVYTKTFV 166 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 + + + N S + + G++ T +N F + G Sbjct: 167 FKRGEFAVNVDYNINNASQQPLEVAMFGQLKLTIDLPKHRDTGSNNFALHTFRGAAYSTS 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D + K+ I + N SN W+ + +Y+A+ ++P + + L +G A Sbjct: 227 DAKYEKYKFDTIADNENLNTTTSNGWVAMLQQYFATAWVPRTQGNNTLYTSNLGNGVA-- 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI G L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSAPVTIAAGAQQDLGATLWVGPEIQDKMAAI-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKFLHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL Sbjct: 400 DK-QKQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFVLWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I P+IM ++MF +MSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PVIMGITMFFIQRMSPTTVTDPMQQKIMTYMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 547 >gi|145632386|ref|ZP_01788121.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 3655] gi|144987293|gb|EDJ93823.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 3655] Length = 541 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 150/576 (26%), Positives = 269/576 (46%), Gaps = 55/576 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSITATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y ++ S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ +++ N G + + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + +SD++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFSDMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + ++I G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGPVVSIPAGSQETITSSLWTGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+MP++F Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + FP+GL++YW SN+I+I QQ +I + + Sbjct: 499 MVFFLWFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|56477030|ref|YP_158619.1| preprotein translocase subunit yidC [Aromatoleum aromaticum EbN1] gi|81677486|sp|Q5P4P4|OXAA_AZOSE RecName: Full=Inner membrane protein oxaA gi|56313073|emb|CAI07718.1| preprotein translocase subunit yidC [Aromatoleum aromaticum EbN1] Length = 550 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 151/579 (26%), Positives = 266/579 (45%), Gaps = 48/579 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN-NERKNIQTVKQPNQ----VDNSYAA 55 M++ + + S+ +V W + + ++ P + A Sbjct: 1 MDQ-RRLVLFLVFSLSLVMLWNAWLKQSQPAPTAVTATAGVEGAGVPTPTTGVAPGATTA 59 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 V A S +PR+ ++ ++ ++ +G L L + V L Sbjct: 60 VPGVPGAATASTAPRMVVRTDLMVAEVSAQGGDIVRLELAQHKATADKTKNFV--LFDDG 117 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP----IKLVFKNANNILFERT 171 T + Y A+ + +LP T + L G+ + ++L + + + Sbjct: 118 TIHLYAAQSGLIGE----DLPTHKTTFALPQGEQVLKEGEDRLVVRLEAPEQDGVKVTKV 173 Query: 172 ISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGV--QEGFIAVLGDK 227 ++ +YL + + N+S + ++ R KP + FGV G + Sbjct: 174 MTFHRGNYLVDVAYEIVNSSERTLSPHAYYQLTRDGKPAESVEAFGVTTFTGPAFYTDAE 233 Query: 228 SLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + ++ +I + + S+ W+ + Y+ S ++P T F G+ Y Sbjct: 234 KFQKVQFEEIAEGKAKFVKKASDGWIAMVQHYFVSAWLPQGGTERE--FFAQKVGNDLYS 291 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 A I PG+S L+AG +E + P ++++D+GW IA P+ Sbjct: 292 AGVIVPVAAIQPGQSGRVEASLYAGPQEQDKLEDI-----APGLDLVVDYGWLTVIAAPL 346 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F ++S+ + +VGN+G AI++ T+ +KL+FFPL+ Y S A M+ + P++ L+E + Sbjct: 347 FWVLSWIHGVVGNWGWAIIIVTILIKLMFFPLSAASYKSMAKMRVLGPRMQRLKELYGND 406 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + +Q+ M+++Y+ INPL GC PIL+QIPVF ++Y V+ S+EMR AP+ GWI+DL+ Sbjct: 407 KAK-MQQEMMEMYRKEKINPLGGCLPILVQIPVFISLYWVLLGSVEMRQAPWLGWIQDLS 465 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 A DP I P+IM +SM IQMK++P P D QA ++ MPV+ Sbjct: 466 AKDPYFIL-------------------PVIMGVSMLIQMKLNPTPPDPIQAKVMMAMPVI 506 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 F F FP+GL++YW +N++SI QQ I +M +E Sbjct: 507 FTFMFLWFPSGLVLYWVVNNILSIAQQWQITRMIESEKS 545 >gi|329123023|ref|ZP_08251594.1| YidC/Oxa1 family membrane protein insertase [Haemophilus aegyptius ATCC 11116] gi|327471954|gb|EGF17394.1| YidC/Oxa1 family membrane protein insertase [Haemophilus aegyptius ATCC 11116] Length = 541 Score = 477 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 154/576 (26%), Positives = 270/576 (46%), Gaps = 55/576 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSITATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y +++S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELNSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ + + N G + + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIVENSGNVAMPTYTGGAYSSSETN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + +SD++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFSDMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + +TI G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGPVVTIPAGSQETITSSLWIGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+MP+VF Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +F FPAGL++YW SN+I+I QQ +I + + Sbjct: 499 MFFFLWFPAGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|300719144|ref|YP_003743947.1| Inner membrane protein [Erwinia billingiae Eb661] gi|299064980|emb|CAX62100.1| Inner membrane protein [Erwinia billingiae Eb661] Length = 548 Score = 477 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 147/589 (24%), Positives = 256/589 (43%), Gaps = 58/589 (9%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ L S +I AWQ + + Q Q S A Sbjct: 1 MDSQRNLFLIAFLFVSFMIWQAWQTDHAPQPV------------QTQTTQNTTSAAGDAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + A + +K L IN +G + L Y + S+ P L +N Sbjct: 49 NQGVPASGQGKTITVKTDVLTLHINTRGGDIEQAQLLTYPDKLGSSQPFQLL--ETNPGF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P T + I + + N + +T Sbjct: 107 LYQAQSGLTGRNGPDNPANGARPLFTTTQDSFEMADGQSELRIPMTYTAENGATYTKTFV 166 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L + + V N + + + G++ + T +N F + G Sbjct: 167 LKRGEFAINVDYQVNNTTQQPLEMAMFGQLKQTIDLPKHRDTGSNNFALHTFRGAAYSSS 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + + K+ I + + +N W+ + +Y+A+ ++P + L +G A Sbjct: 227 ETNYEKYKFDKISDNENLSTTTNNGWVAMLQQYFATAWVPRTNGTNTLYTSNLGNGIA-- 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI PG L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSAPVTIAPGAQQNLAATLWVGPEIQDKMAAI-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ + Sbjct: 340 LFKLLKFLHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERIGE 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSRDKKK 547 >gi|283787595|ref|YP_003367460.1| inner membrane protein [Citrobacter rodentium ICC168] gi|282951049|emb|CBG90727.1| inner membrane protein [Citrobacter rodentium ICC168] Length = 547 Score = 477 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 142/587 (24%), Positives = 261/587 (44%), Gaps = 54/587 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ S+ P L + + Y Sbjct: 51 GVPASGQGKLITVKTDVLDLTINTRGGDVEQALLPAYPKELGSSEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDTFVLADGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDK 227 Y + V N + S G++ + T ++ F + G D+ Sbjct: 169 RGDYAVNVNYNVLNAGAKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N + + W+ + +Y+A+ ++P + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVNANGGWVAMLQQYFATAWVPRNDGTNN--FYTANLGNGVAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F FP+GL++Y+ SN+++I+QQ +I + + GL R + + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKS 547 >gi|145634176|ref|ZP_01789887.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittAA] gi|148826353|ref|YP_001291106.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittEE] gi|166975868|sp|A5UD72|OXAA_HAEIE RecName: Full=Inner membrane protein oxaA gi|145268620|gb|EDK08613.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittAA] gi|148716513|gb|ABQ98723.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittEE] Length = 541 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 150/576 (26%), Positives = 269/576 (46%), Gaps = 55/576 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSITATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y ++ S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ +++ N G + + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + ++D++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFADMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + +TI G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGPVVTIPAGSQETITSSLWTGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+MP++F Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + FP+GL++YW SN+I+I QQ +I + + Sbjct: 499 MVFFLWFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|319775066|ref|YP_004137554.1| Inner membrane protein oxaA [Haemophilus influenzae F3047] gi|317449657|emb|CBY85863.1| Inner membrane protein oxaA [Haemophilus influenzae F3047] Length = 541 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 153/576 (26%), Positives = 270/576 (46%), Gaps = 55/576 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSITATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y ++ S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ +++ N G + + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + +SD++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFSDMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + + +TI G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGSVVTIPAGSQETITSSLWTGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRECFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+MP+VF Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +F FP+GL++YW SN+I+I QQ +I + + Sbjct: 499 MFFFLWFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|330861750|emb|CBX71924.1| inner membrane protein oxaA [Yersinia enterocolitica W22703] Length = 548 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 149/589 (25%), Positives = 257/589 (43%), Gaps = 63/589 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S +I AWQ + + N T + +Q Sbjct: 4 QRNLLLIALLFVSFMIWQAWQVDNNPQPAAQTTQQTANTATGDKASQA------------ 51 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + +K L +IN +G + NL Y + S+ L + Y Sbjct: 52 VPGSGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFIYQ 109 Query: 122 AELDYVSTANNIELPN--------SNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + N T + L G+ I L F + +F +T Sbjct: 110 AQSGLTGKSGPDNPANGERPLFEVPQTSFVLADGQ---DELRIPLTFTGKDGSVFTKTFV 166 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG-- 225 L + Y + V N S + + G++ + T +N F + A Sbjct: 167 LKRNDYAIGVDYHVKNASAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSD 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + +SDIE S+ + W+ + +Y+A+ +IP+ + F G+ Sbjct: 227 ETKYKKYSFSDIEDKSL-DITTKGGWVAMLQQYFATAWIPAANE--TNTFYSADLGNGLA 283 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 F + I PG+ L+ G + + P ++ +D+GW +FI++P Sbjct: 284 AIGFKGAPVVIQPGEQKQLGATLWVGPEIQDKMAAI-----APHLDLTVDYGWLWFISQP 338 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 339 LFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGD 398 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 399 DK-QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDL 457 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++M+ KMSP D Q I+ +MP Sbjct: 458 SAQDPYYIL-------------------PILMGITMYFIQKMSPTTVTDPMQQKIMTFMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FPAGL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 499 VIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 546 >gi|301169726|emb|CBW29327.1| cytoplasmic insertase into membrane protein, Sec system [Haemophilus influenzae 10810] Length = 541 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 154/576 (26%), Positives = 272/576 (47%), Gaps = 55/576 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSITATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y +++S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELNSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ +++ N G + + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + +SD++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFSDMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + + +TI G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGSVVTIPAGSQETITSSLWTGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+MP+VF Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +F FPAGL++YW SN+I+I QQ +I + + Sbjct: 499 MFFFLWFPAGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|145640676|ref|ZP_01796259.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae R3021] gi|145274602|gb|EDK14465.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 22.4-21] Length = 541 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 152/576 (26%), Positives = 270/576 (46%), Gaps = 55/576 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSITATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y ++ S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ +++ N G + + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + ++D++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFADMQDNNLS-IGTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + +TI G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGPVVTIPSGSQETITSSLWTGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+MP+VF Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +F FP+GL++YW SN+I+I QQ +I + + Sbjct: 499 MFFFLWFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|73666922|ref|YP_302938.1| putative inner membrane protein translocase component YidC [Ehrlichia canis str. Jake] gi|72394063|gb|AAZ68340.1| protein translocase subunit yidC [Ehrlichia canis str. Jake] Length = 579 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 217/587 (36%), Positives = 332/587 (56%), Gaps = 23/587 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ LSV+I+ W+ Y + E P D+ Sbjct: 1 MVEVRNLILAVILSVLIMTGWRFIYDKFFTTQHIIEDNTNSDTMIPEIDDS----FTHKT 56 Query: 61 RAQALSMSPRVELK--NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 RA+ + + + L N + GSI+LKGAQFDDL + YH+ SNS + LLSP T+ Sbjct: 57 RAEIIGSNTDIRLNLSNKKIHGSISLKGAQFDDLIFKNYHVTPDSNSDGIILLSPEETEG 116 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YF E ++ + I LPN +++WN L+P P L + N I+F+ I+LD Y Sbjct: 117 VYFIEFGWIDPQHKITLPNHSSIWNSDQ-PTLSPNNPATLTWDNKEGIIFKIRITLDNDY 175 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +FKI VTNN+ + P GRI R K T + + EG + +L E Y I Sbjct: 176 MFKIEQMVTNNTNSIVNLIPYGRINRSKHTTEKSYWISHEGAVGSFS-NTLKEWTYKTIT 234 Query: 239 KSSI------SNFHESNSWLGISDKYWASVFIPS--KETSFHSQFKYLS-DGHARYQAKF 289 K + N W+GI DKYW + IP+ +++ + K+ + R+Q F Sbjct: 235 KEKNIRIQSQDRNDDQNQWIGIGDKYWFTALIPNVLQKSKVNFHVKHAKHNSEDRFQVDF 294 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 S + P K++T+T++LFAGAKE + Y+ +L I F+ +D+G YFI KP+F+L Sbjct: 295 SHDNYIAHPNKTVTSTSYLFAGAKELKLLDKYKDNLNIALFDKAVDFGVLYFITKPVFLL 354 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + YFY+ +GNFG+AI+L TV +KL+ FPL+ K YVS +K +QP I +++E K + Sbjct: 355 LEYFYDAIGNFGLAILLLTVVIKLIMFPLSYKAYVSMLKLKYLQPDILKIKELHKNDNDK 414 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + K + ++K +N+NP++G PIL+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL++ D Sbjct: 415 -MSKEISAIFKKNNVNPMSGFVPILIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLSSFD 473 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVV 526 N+ T+FG+L F +P + +GI P+I+ ++M IQ K++ DK QA + ++P + Sbjct: 474 TANVLTMFGLLKFNVP--ICIGILPVILGITMVIQQKLNNSNSLNQDKVQANFMKFLPYI 531 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F+F SSFPAGLIIYW SN I+I+QQ +I + + ++ Sbjct: 532 FIFIFSSFPAGLIIYWICSNSITIIQQLIIKQYASKKFNFQKVVKQE 578 >gi|290477350|ref|YP_003470271.1| preprotein translocase cooperates with SecYEG and SecDFyajC translocon membrane protein [Xenorhabdus bovienii SS-2004] gi|289176704|emb|CBJ83513.1| preprotein translocase, cooperates with SecYEG and SecDFyajC translocon, membrane component [Xenorhabdus bovienii SS-2004] Length = 537 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 141/583 (24%), Positives = 264/583 (45%), Gaps = 61/583 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + + +S ++ AW E+ N + Q +Q N Sbjct: 4 QRNLLFIALLFVSFLVWQAW---------EKDQNPQPTAQITQQAN----------TPSS 44 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + +K L IN +G ++ +L Y + SN P L S + Y Sbjct: 45 EASSGQGKLITVKTDVLSLHINTRGGDIEEADLLAYPDTLGSNKPFKLL--ESTPEFIYQ 102 Query: 122 AELDYVST---ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-H 177 A+ T N + P +T + I + + + +++ +T L + Sbjct: 103 AQSGLTGTNGPDNQADRPFYHTTQDSYVLADGQNELRIPMTYTAPDGVVYVKTFILKRGN 162 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG--DKSLV 230 Y + + N + ++ + G++ + T ++ F + A + Sbjct: 163 YAVSVDYNIDNVTDKPLQMAFFGQLKQSVELPKSRDTGSSNFALHTYRGAAYSSAEAKYE 222 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + K+ DIE +++ + W+ + +Y+A+ ++P ++ L + + Sbjct: 223 KYKFGDIEDKALA-VTTNGGWVAMLQQYFATAWVPGANSTNTFYTIDLKN-QKMAIIGYK 280 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I P ++ L+ G + + P ++ +D+GW +FI++P+F L+ Sbjct: 281 GETVNIAPNSKQNISSTLWVGPEIQDKMAEV-----APHLDLTVDYGWLWFISQPLFKLL 335 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPKI +RE+ Q Sbjct: 336 KFLHEFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRLLQPKITAMRERHGDD-RQR 394 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+ LYKT +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF GWI+DL+A DP Sbjct: 395 MSQEMMALYKTEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFIGWIEDLSAQDP 454 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I P++M +MF+ K+SP D Q I+ +MPV+F Sbjct: 455 YYIL-------------------PLLMGATMFVIQKLSPTTVTDPMQQKIMTYMPVMFTV 495 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 FP+GL++Y+ SN+++I+QQ VI + + GL R + Sbjct: 496 FFLWFPSGLVLYYIVSNLVTIIQQQVIFRSL-EKRGLHTREKK 537 >gi|117617478|ref|YP_858698.1| membrane protein OxaA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166975847|sp|A0KQZ7|OXAA_AERHH RecName: Full=Inner membrane protein oxaA gi|117558885|gb|ABK35833.1| membrane protein OxaA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 548 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 142/577 (24%), Positives = 257/577 (44%), Gaps = 49/577 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + QT + + + + Sbjct: 1 MESQRNLIL-IGLLFVSFLLWQQWESDKAPKP--APTTVAQTEHFVPEAGQTGDIPQVSE 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +A A + + + + L +++ +G +L + L+ + P V L S ++ Y Sbjct: 58 QANANTARKLITVSSDVLKLTLDTQGGDIVSADLLAHKLEEGKDQPFVLLTSQ--PEHLY 115 Query: 121 FAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ V + T + L G+ + + + ++ ++F + Sbjct: 116 VAQSGLVGRNGPDSQAQGRPTYEAAQTSYQLADGQ---DQVVVPMTWTDSKGVVFTKEFV 172 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGV---QEGFIAVLGDK 227 L Y + + N S + ++ G++ + P+ V G D Sbjct: 173 LKRGDYAVGVDYKIDNKSAEPVQVQFYGQLKQTVTTPKDQQGHAMVASAYRGGAFSSEDT 232 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + +++ + + N W+ + Y+ S + P+ + + +S + + G + Sbjct: 233 RYKKYTFDEMKDADL-NKTTKGGWVAMLQHYFVSAWAPNADDT-NSFYSRVIPGKDQAII 290 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + G+ T+ L+ G K + ++ +D+GW +FIA+P+ Sbjct: 291 GYKAPLVDVAAGQQAEVTSKLWVGPKLQDQMAKVAN-----HLDLTVDYGWLWFIAQPLH 345 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L++ F+ V N+G+AI++ T+ V+ + FPL K QY S A M+ +QPK+ LRE+F Sbjct: 346 WLLTVFHGFVQNWGVAIIMLTLLVRGIMFPLTKAQYTSMAKMRMLQPKLAALRERFGDD- 404 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M++LYK +NPL GC PIL+Q+P+F A+Y + S+E+RHAPF WI DL+ Sbjct: 405 RQKMSQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWALMESVELRHAPFALWITDLSV 464 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP + PI+M SM+ KMSP D Q ++ +MP++ Sbjct: 465 KDPFFVL-------------------PILMGASMWYLQKMSPTTITDPMQQKVMQFMPII 505 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F F FPAGL +YW SNVISI QQ +I + + Sbjct: 506 FTFMFLWFPAGLTLYWLVSNVISITQQTIIYRQLEKK 542 >gi|161544990|ref|YP_153758.2| putative inner membrane protein translocase component YidC [Anaplasma marginale str. St. Maries] Length = 572 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 191/577 (33%), Positives = 316/577 (54%), Gaps = 15/577 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ SV ++ W+ Y ++E +++ + + + + + Sbjct: 1 MSEARNLVLAVVASVAVMVGWRFVYERVLVKEYPQQQREVVSE---SLIPEAMDVAEYRP 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 R A++ PRV L N S+ SI+LKGA DD++L Y + +S V L+SP T+ Sbjct: 58 RVDAINSVPRVRLGNTSVRASISLKGALVDDVSLTKYQVSTDKHSENVVLMSPEGTREDS 117 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E ++ + ++P+ NT+W + G + L + N ++F S+D Y+F Sbjct: 118 IVEFGWIDPEHKTKVPDKNTLWEVEQGSEASGEGSATLRWDNGQGLVFRLRFSIDRAYMF 177 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + V N++ + +R S GRI + Q + + EG I G L E Y D++K Sbjct: 178 SVSQEVENSTGEDLRLSYYGRINKAHAQDGKSYWISHEGAIGSFG-HGLQEWTYKDMQKG 236 Query: 241 SISNFHESN-----SWLGISDKYWASVFIPSKET-SFHSQFKYLSDGH-ARYQAKFSANE 293 S + +N W+G++DKYW + +PS + + K++ +Q FS + Sbjct: 237 SGARVGATNEGTGSHWIGLADKYWFTALVPSSDKGKLAFRAKHVPRNDVDHFQVDFSRSY 296 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 TI G +T LF GAKE + +Y L IP F+ +D+G YFI KP+F L+ YF Sbjct: 297 GTIPAGGKAESTTQLFIGAKELAVLDNYRSGLNIPLFDKAVDFGVLYFITKPVFQLLQYF 356 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + +VGNFG+AI++ T+ +KL+ FPL+ K YVS +K +QP+I +RE K + + K Sbjct: 357 HKVVGNFGLAIVMLTIAIKLVVFPLSSKSYVSMFKLKKLQPEISRIRELHKTDDVR-ISK 415 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 + L++ H ++P++G PIL+QIPVFFA+YKV+ +++EMRHAP + WI+DL++ D N+ Sbjct: 416 EISALFRKHGVSPMSGFLPILVQIPVFFALYKVLFVTIEMRHAPLFAWIQDLSSHDTANL 475 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-ILNWMPVVFVFALS 532 LFG+L F P + VG+ PII+ ++M +Q K++ ++ ++P VFVF S Sbjct: 476 LNLFGLLRFEPP--ICVGVLPIILGITMVLQQKINQQDQATQDPYGVMKFLPYVFVFIFS 533 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 SFPAGL++YW SNVI+++QQ + + L++ Sbjct: 534 SFPAGLVLYWICSNVITMLQQLFVRRFIFDRRDLVNN 570 >gi|16762484|ref|NP_458101.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143972|ref|NP_807314.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052693|ref|ZP_03345571.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213424948|ref|ZP_03357698.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|38503116|sp|Q8Z2N7|OXAA_SALTI RecName: Full=Inner membrane protein oxaA gi|25299103|pir||AF0957 probable membrane protein STY3938 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504789|emb|CAD03154.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139608|gb|AAO71174.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 548 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 146/589 (24%), Positives = 260/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTMQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + +V N + S G++ + T ++ F + G Sbjct: 167 FKRGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|62182329|ref|YP_218746.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75505468|sp|Q57HZ7|OXAA_SALCH RecName: Full=Inner membrane protein oxaA gi|62129962|gb|AAX67665.1| putative Preprotein translocase subunit YidC [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 548 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 146/589 (24%), Positives = 259/589 (43%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTHGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTQTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + +V N + S G++ + T ++ F + G Sbjct: 167 FKRGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTSAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|123444346|ref|YP_001008311.1| putative inner membrane protein translocase component YidC [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122091307|emb|CAL14193.1| probable membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 548 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 148/589 (25%), Positives = 257/589 (43%), Gaps = 63/589 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S +I AWQ + + N T + +Q Sbjct: 4 QRNLLLIALLFVSFMIWQAWQVDNNPQPAAQTTQQTANTATGDKASQA------------ 51 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + +K L +IN +G + NL Y + S+ L + Y Sbjct: 52 VPGSGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFIYQ 109 Query: 122 AELDYVSTANNIELPN--------SNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + N T + L G+ I L F + +F +T Sbjct: 110 AQSGLTGKSGPDNPANGERPLFEVPQTSFVLADGQ---DELRIPLTFTGKDGSVFTKTFV 166 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG-- 225 L + Y + + N S + + G++ + T +N F + A Sbjct: 167 LKRNDYAIGVDYHIKNASAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSD 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + +SDIE S+ + W+ + +Y+A+ +IP+ + F G+ Sbjct: 227 ETKYKKYSFSDIEDKSL-DITTKGGWVAMLQQYFATAWIPAANE--TNTFYSADLGNGLA 283 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 F + I PG+ L+ G + + P ++ +D+GW +FI++P Sbjct: 284 AIGFKGAPVVIQPGEQKQLGATLWVGPEIQDKMAAI-----APHLDLTVDYGWLWFISQP 338 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 339 LFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGD 398 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 399 DK-QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDL 457 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++M+ KMSP D Q I+ +MP Sbjct: 458 SAQDPYYIL-------------------PILMGITMYFIQKMSPTTVTDPMQQKIMTFMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FPAGL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 499 VIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 546 >gi|90581131|ref|ZP_01236930.1| putative inner membrane protein translocase component YidC [Vibrio angustum S14] gi|90437652|gb|EAS62844.1| putative inner membrane protein translocase component YidC [Vibrio angustum S14] Length = 544 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 147/570 (25%), Positives = 252/570 (44%), Gaps = 46/570 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S ++ W P+ + +++ Q+ P+ Sbjct: 4 QRNILLIALLFVSFLLFQQWNAD-KTPKPQSQGVAQQSTQSSDIPSHSAEGQP------L 56 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 S + +K L +++ G D L Y+ + S P V L + Y Sbjct: 57 TDQTSSQNLITIKTDVLELTVDTLGGDVVDAKLLKYNNTLDSKDPFVLLNDTDG--HDYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + +++ + + + + F + I + +T L + Sbjct: 115 AQSGLIGPNGADSQQGGRAQYSVTAKDFVMSPEQNELRVPMTFT-KDGINYTKTFVLKRN 173 Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG--DKSLVEQKY 234 Y + TV NN+ ++ RHK + + + D + + Sbjct: 174 DYAVNVDYTVANNTDKAASVQMYAQL-RHKLSDSGGSLTMPTYLGGAYSANDTKYKKYSF 232 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++ + + W+ I Y+ S +IP SQ + Y Sbjct: 233 DDMKDKNL-DVAANEGWVAIMQHYFVSAWIPRDGADQTSQVYSTTSNGNGY-IGVRMPIE 290 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 T+ PG+S L+ G K + K+L + +D+GW +FIA P+ L+S+ + Sbjct: 291 TVAPGQSKEIKATLWVGPKLQNEMAATAKNLN-----LTVDYGWLWFIANPLHKLLSFIH 345 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +LVGN+GIAI++ T V+ +PL K QY S A M+ +QPKI +RE+ Q + Sbjct: 346 SLVGNWGIAIIILTFIVRGAMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD-RQRQSQE 404 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RHAPF+GWI DL+A DP + Sbjct: 405 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHAPFFGWIHDLSAQDPYYVL 464 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 PI+M ++MF KMSP D Q I+ +MPV+F F Sbjct: 465 -------------------PILMGITMFFIQKMSPSTVTDPMQQKIMTFMPVMFTFFFLF 505 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + + Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTIIFRALEKK 535 >gi|300725384|ref|YP_003714723.1| preprotein translocase [Xenorhabdus nematophila ATCC 19061] gi|297631940|emb|CBJ92665.1| preprotein translocase, cooperates with SecYEG and SecDFyajC translocon, membrane component [Xenorhabdus nematophila ATCC 19061] Length = 544 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 145/582 (24%), Positives = 265/582 (45%), Gaps = 54/582 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E N + Q +Q + S A+ Sbjct: 1 MDSQRNLLL-IALLFVSFLVWQAW------ESDKNPQPAAQITQQTSPTLTSEASN---- 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNA 119 + +K L IN +G ++ +L Y + S +P L +P T A Sbjct: 50 -----EQGKLITVKTDVLSLHINTRGGDIEEADLLAYPDTLGSQTPFKLLETTPEFTYQA 104 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HY 178 N E P +T N I + + + +++ +T L +Y Sbjct: 105 QSGLTGANGPDNQAERPLYHTTQNSFVLADGQDELRIPMTYTAPDGVVYVKTFVLKRGNY 164 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG--DKSLVE 231 + ++ N + ++ + G++ + T ++ F + A + + Sbjct: 165 AVSVDYSINNVTDKPLQMAFFGQLKQSVDVPKHRDTGSSNFALHTYRGAAYSSDEAKYEK 224 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 K+ +IE +++ W+ + +Y+A+ ++P + + + L + + Sbjct: 225 YKFDEIESKALA-VTTKGGWVAMLQQYFATAWVPGEGKTSNFYTIDLKN-QKMAIIGYKG 282 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I I P ++ L+ G + + P ++ +D+GW +FI++P+F L+ Sbjct: 283 ENINIAPNSQQNISSTLWVGPEVQDKMAAV-----APHLDLTVDYGWLWFISQPLFKLLK 337 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPKI +RE+F Q + Sbjct: 338 FLHEYIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRLLQPKITAMRERFGDD-RQRM 396 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + M+ LYKT +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF GWI DL+A DP Sbjct: 397 SQEMMALYKTEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFIGWINDLSAQDPY 456 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 I P++M ++MF+ K+SP D Q I+ +MPV+F Sbjct: 457 YIL-------------------PLLMGVTMFVIQKLSPTTVTDPMQQKIMTYMPVMFTVF 497 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 FP+GL++Y+ SN+++I+QQ VI + + GL R + Sbjct: 498 FLWFPSGLVLYYIVSNLVTIIQQQVIFRSL-EKRGLHSREKK 538 >gi|145638178|ref|ZP_01793788.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittII] gi|145272507|gb|EDK12414.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittII] gi|309751334|gb|ADO81318.1| Inner membrane translocation protein YidC [Haemophilus influenzae R2866] Length = 541 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 149/576 (25%), Positives = 268/576 (46%), Gaps = 55/576 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSITATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y ++ S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRFGRAQYQIEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ +++ N G + + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + ++D++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFADMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + ++I G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGPVVSIPAGSQETITSSLWTGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+MP++F Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + FP+GL++YW SN+I+I QQ +I + + Sbjct: 499 MVFFLWFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|58040258|ref|YP_192222.1| putative inner membrane protein translocase component YidC [Gluconobacter oxydans 621H] gi|58002672|gb|AAW61566.1| 60 kD inner membrane protein OxaA [Gluconobacter oxydans 621H] Length = 575 Score = 474 bits (1221), Expect = e-131, Method: Composition-based stats. Identities = 196/574 (34%), Positives = 314/574 (54%), Gaps = 20/574 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A LS +I+ + F P ++ + Q + + Sbjct: 1 MD-TKRIIAATLLSALILIGFDYFMPKPHQDDPHPVTHAPAAQVQNSAPTTAAPPAEAAT 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 QA + R+ + P + GS+NLKGA DDL L Y ++ +SP+V LL + + + Sbjct: 60 ETQA--TARRIPVTGPDVQGSLNLKGAVLDDLILMKYRETLAKDSPLVRLLDKAGSAHPT 117 Query: 121 FAELDYV-STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 F + + + +N LP+ NTVW S + LTP P+ L + N ++F I+LDEHY+ Sbjct: 118 FVVIGWTNAPGSNARLPDLNTVWE-SSDETLTPDHPVTLHWDNGQGLVFSIQIALDEHYM 176 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F + TV N+S + P R+ R F EG IAV+G + ++ Y ++ K Sbjct: 177 FAVSQTVENHSGQPVALVPFERVQRDYDAPE-GAFTAHEGPIAVIG-GRMQDESYKNLRK 234 Query: 240 SSIS------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA-N 292 + + +N W GISDK+W + P+ T + F Y+ YQ S N Sbjct: 235 GADHPDHVSWSSTGTNGWDGISDKFWLTAVAPADGTPVAASFAYVPGTPGSYQVGMSTQN 294 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 I+P SIT + +FAGAK + Y K L IP + ID+GWF F+ +P+ L+ + Sbjct: 295 AQQIMPNGSITEKSHVFAGAKVVSLLQGYSKQLGIPDLDKAIDFGWFSFLTRPLLTLLHW 354 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 Y +GNFG+A+M T+ VK++ FPLA K S+A M+ + PK+ E+REK K P + Sbjct: 355 LYLHLGNFGLALMALTLIVKIVLFPLASKAAQSSARMRLLAPKVKEIREKNKDDP-MAMN 413 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + ++ LY+ ++P +GC P+L+Q P+FF +YK+++IS++ RHAPF+GWI DL+ DPTN Sbjct: 414 QKVMALYREEKVSPASGCLPMLIQAPIFFCLYKILNISIDARHAPFFGWIHDLSMPDPTN 473 Query: 473 IFTLFGILPF---YLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVF 527 +F LFG+LPF + F+HV IW + L+ ++ + + A D QA ++ +MP+V+ Sbjct: 474 VFNLFGLLPFDPTHYSSFLHVSIWGTALGLTFWLLQRQTSSTASLDPAQARMMQFMPLVY 533 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 VF +S FPA L++Y++W+N++++ QQ I + G Sbjct: 534 VFFMSGFPASLLVYYTWNNLLTVAQQMFIQRRTG 567 >gi|293602692|ref|ZP_06685133.1| Oxa1 family cytochrome oxidase biogenesis protein [Achromobacter piechaudii ATCC 43553] gi|292818883|gb|EFF77923.1| Oxa1 family cytochrome oxidase biogenesis protein [Achromobacter piechaudii ATCC 43553] Length = 559 Score = 474 bits (1221), Expect = e-131, Method: Composition-based stats. Identities = 147/584 (25%), Positives = 253/584 (43%), Gaps = 48/584 (8%) Query: 5 WNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKN-----IQTVKQPNQVD 50 + + S ++ W N+ + P E + +V Sbjct: 4 RRTVLWMIFSFSLLLLWNNWQIHNGKPSLFGGPTPAASTAEPQAGANNATPSVPSAPTTT 63 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + + + A A + S V + L + + GAQ L Y + P V L Sbjct: 64 ATAPSAVPGATAPAAARSEEVVVTTDVLRLTFDTMGAQLVRAELLKYPATGQPDKPTVLL 123 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFE 169 + Y + V N P T + + S + + + F+ + Sbjct: 124 DRSAGLN--YVVQSGVVGAPNGQSFPTHQTPFRVTSSERQLTGDNLVVSFEGESGGVKVT 181 Query: 170 RTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGD 226 +T +L + Y + + N + + ++ R P ++ + GF Sbjct: 182 KTFTLHKGRYDIDVRHDLANVGSAPVTPALYLQLERDGNDPADTSSFYHTFTGFAVYSEQ 241 Query: 227 KSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + +SDIEK + ++ N W+ + Y+A+ ++P + ++ L Y Sbjct: 242 DKFQKSTFSDIEKKKANYIKQADNGWIAVVQHYFATAWVPPQGKPRTNEL--LEVQKNLY 299 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 A+ I PG + + L+ G ++ + P E+++D+GW IAKP Sbjct: 300 AARSIEAVGEIAPGSASRVDSHLWVGPQDQKAMAAL-----APGLELVVDYGWLTIIAKP 354 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F LM++ ++L+GN+G I+ TV +K +FFPLA Y S A MK + P++ L+EK+ Sbjct: 355 LFTLMTWLHSLLGNWGWTIVALTVLIKAIFFPLAAASYRSMARMKQVAPRLQALKEKYGD 414 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q L AM+++Y+T INPL GC P+++QIPVF ++Y V+ S+EMR AP+ W+ DL Sbjct: 415 DK-QKLNAAMMEMYRTEKINPLGGCLPMVVQIPVFISLYWVLLASVEMRGAPWILWVHDL 473 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 + DP I P IM +MF+Q+K++P P D QA ++ MP+ Sbjct: 474 SIRDPYFIL-------------------PAIMMATMFLQIKLNPTPPDPIQAKVMMIMPL 514 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 VF + FPAGL++YW +N +SI QQ I + + Sbjct: 515 VFGGMMFFFPAGLVLYWCVNNTLSIAQQWSITRSMQRKTEAAAN 558 >gi|190570482|ref|YP_001974840.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019241|ref|ZP_03335048.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190356754|emb|CAQ54113.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995350|gb|EEB55991.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 569 Score = 474 bits (1221), Expect = e-131, Method: Composition-based stats. Identities = 218/573 (38%), Positives = 340/573 (59%), Gaps = 18/573 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A LS++I+ W Y + + +I+ ++ N A ++ + Sbjct: 1 MSEAKNLILATILSILIIVLWHIIYDN--FLNTSQSQPSIENIEHIES-SNDLAPMIYQN 57 Query: 61 RAQALSMS--PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R++ ++ + RV L N L GSI+LKGA+FDDL L YHL+ SS+SP V LLSP+ +K+ Sbjct: 58 RSEIINSTREQRVNLTNNMLEGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESKD 117 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YFAE ++ I++P+S TVW + L + N N ILF ISLD++Y Sbjct: 118 VYFAEFGWLDPNEKIKVPDSKTVWQADK----LNQKEVNLFWDNENGILFRMKISLDDNY 173 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +FK+ + NN+ D + P G+I R + + + EG + +K L E Y DI Sbjct: 174 MFKVEQIIENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFNNK-LEEWTYKDIS 232 Query: 239 KSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITI 296 K + S SW G +DKYW + IP K + K+ + + ++Q F I Sbjct: 233 KKRLIKASTSEKSWFGFADKYWFTAIIPEKSDQINVSIKHTNVNNIDKFQVDFVKPYKHI 292 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 LPG S++T N+ FAGAK+ + Y+ L IP F+ +D+G YFI KP+F+L+ YF + Sbjct: 293 LPGASVSTLNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFV 352 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + NFG+AI+L T+ +KLL PL+ + Y+S +K++QP++ ++E +K + K I Sbjct: 353 LKNFGLAILLLTLVIKLLMLPLSNRSYISMFKVKSLQPELTRIKELYKNDSLK-QHKETI 411 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 L+K +N+NP++ +P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL+A+DPTNIFTL Sbjct: 412 ALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLSASDPTNIFTL 471 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFALSS 533 FG+ + P + +GI PII +M IQ K+S D Q ++ ++P + VF SS Sbjct: 472 FGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFSS 529 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 FPAGL+IYW +SN+I++VQQ++I + ++G+ Sbjct: 530 FPAGLVIYWIFSNIITLVQQSLIKLLLTRKVGM 562 >gi|89074709|ref|ZP_01161167.1| putative inner membrane protein translocase component YidC [Photobacterium sp. SKA34] gi|89049473|gb|EAR55034.1| putative inner membrane protein translocase component YidC [Photobacterium sp. SKA34] Length = 544 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 146/570 (25%), Positives = 251/570 (44%), Gaps = 46/570 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S ++ W P+ + +++ Q+ P+ Sbjct: 4 QRNILLIALLFVSFLLFQQWNAD-KTPKPQSQGVAQQSTQSSDIPSHSAEGQP------L 56 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 S + +K L +++ G D L Y+ + S P V L + Y Sbjct: 57 TDQTSSQNLITIKTDVLELTVDTLGGDVVDAKLLKYNNTLDSKDPFVLLNDTDG--HDYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + +++ + + + + F + I + +T L + Sbjct: 115 AQSGLIGPNGADSQQGGRAQYSVTAKDFVMGPEQNELRVPMTFT-KDGINYTKTFVLKRN 173 Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG--DKSLVEQKY 234 Y + TV NN+ ++ RHK + + + D + + Sbjct: 174 DYAVNVDYTVANNTDKAASVQMYAQL-RHKLSDSGGSLTMPTYLGGAYSANDTKYKKYSF 232 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++ + + W+ I Y+ S +IP SQ + + Sbjct: 233 DDMKDKNL-DVAANEGWVAIMQHYFVSAWIPRDGADQTSQVYSTTSNGNGF-IGVRMPIE 290 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 T+ PG+S L+ G K + K+L + +D+GW +FIA P+ L+S+ + Sbjct: 291 TVAPGQSKAIKATLWVGPKLQNEMAATAKNLN-----LTVDYGWLWFIANPLHKLLSFIH 345 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 LVGN+GIAI++ T V+ +PL K QY S A M+ +QPKI +RE+ Q + Sbjct: 346 GLVGNWGIAIIILTFIVRGAMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD-RQRQSQE 404 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RHAPF+GWI DL+A DP + Sbjct: 405 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHAPFFGWIHDLSAQDPYYVL 464 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 PI+M ++MF KMSP D Q I+ +MPV+F F Sbjct: 465 -------------------PILMGITMFFIQKMSPSTVTDPMQQKIMTFMPVMFTFFFLF 505 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + + Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTIIFRALEKK 535 >gi|193069129|ref|ZP_03050086.1| inner membrane protein OxaA [Escherichia coli E110019] gi|192957453|gb|EDV87899.1| inner membrane protein OxaA [Escherichia coli E110019] Length = 548 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 143/589 (24%), Positives = 263/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ V+Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQVQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 Y A+ + ++N+ + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|238899054|ref|YP_002924736.1| protein involved in protein translocation and folding, substrates includes ATP synthase, SecYEG, LacY [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466814|gb|ACQ68588.1| protein involved in protein translocation and folding, substrates includes ATP synthase, SecYEG, LacY [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 547 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 150/586 (25%), Positives = 271/586 (46%), Gaps = 56/586 (9%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN +S +I WQ + + V N + S L + Sbjct: 4 QRNLLLIAFFFVSFMIWQTWQVDHNP-----LKAVENGTALVTNNNGTETSTLVPLSN-- 56 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + ++ + L +I+ +G NL Y + S L S Y Sbjct: 57 ----TQGQKITVTTDVLSLTIDTQGGDIQQANLLAYPDTLGSKKSFQLL--ESTPDFVYE 110 Query: 122 AELDYVSTAN-NIELPNSNTVWNLISGKILTPT----TPIKLVFKNANNILFERTISLDE 176 A+ + L V+++ + P I L F + N ++ +T L Sbjct: 111 AQSGLTGKNGPDNPLNGHRPVYSVKQPHFVLPEGQNELQIPLTFTDKNGLVLTKTFILKR 170 Query: 177 H-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG--DKS 228 + Y +++ + N S + F+ G++ + TA++ F + A + Sbjct: 171 NDYAIRVLYRINNASSTPLEFNFFGQLKQSTQLPKHRDTASSNFALHTYRGAAYSSKEDK 230 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + +SDIE +++ N W+ + +Y+A+ +IP+ + ++L GH + Sbjct: 231 YKKYSFSDIEDANL-NITTQGGWVAMLQQYFATAWIPNAGETHDFYSRHL--GHGLVASG 287 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F + + + PG+ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 288 FKSLPVLVNPGEQKELSATLWVGPELQDKMAVI-----APHLDLTVDYGWLWFISQPLFK 342 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + + VGN+G++I+L T V+ + +PL K QY S A M+ +QPK+ E+RE+ Sbjct: 343 LLKFIHGFVGNWGLSIILITFIVRGIMYPLTKAQYTSMAKMRMLQPKLTEMRERIGDD-R 401 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 QRMSQEMMALYKSEKVNPLGGCLPLIIQMPIFLALYYMLMGSVELRHAPFILWIHDLSAQ 461 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M L+M+ KMSP D Q I+N+MPV+F Sbjct: 462 DPYYIL-------------------PILMGLTMYFIQKMSPSTITDPMQKKIMNFMPVIF 502 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 FP+GL++Y+ SN+++I+QQ +I + + GL +R + Sbjct: 503 TVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLESR-GLHNRDKKK 547 >gi|189183736|ref|YP_001937521.1| putative inner membrane protein translocase component YidC [Orientia tsutsugamushi str. Ikeda] gi|189180507|dbj|BAG40287.1| 60 kD inner-membrane protein [Orientia tsutsugamushi str. Ikeda] Length = 567 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 214/568 (37%), Positives = 337/568 (59%), Gaps = 11/568 (1%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS---YAAVLI 58 + N +AI LS+ I+ W FY PR+ +M+N +K + + + +A+ I Sbjct: 4 DNRLNLILAITLSLAIILGWHFFYEKPRLIKMSNAQKEKIEYNKRSSTNKHLLHESALKI 63 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D+ + S RV++ L GSI+LKG +FDDL L GY DV NSP V LLSPS T Sbjct: 64 KDKVDIIDYSTRVKIMTNKLHGSISLKGLRFDDLILVGYKQDVLENSPDVELLSPSETAT 123 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 AYFAE+ + N + + PNS+T+W IL + N +N+ F ++S+D++ Sbjct: 124 AYFAEVGWYCAKNADSDFPNSDTLWQ-TDKSILQANDTTTFTWTNKHNVQFIVSVSIDDN 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+F I ++ NNS Q+ G I R+ + N+ + +G IA + D L E Y+ + Sbjct: 183 YMFTINQSIVNNSKQQLAVQFHGLIHRNLAENE-NSANIFQGPIASI-DSYLNEVTYNKL 240 Query: 238 -EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 EK I WLGISDKYW + FIP + + + F Y G +YQ F + + + Sbjct: 241 KEKKHIDYNLNVVHWLGISDKYWLTSFIPDVKYRYSTSFMYGKAGFEKYQVSFLSPKEVV 300 Query: 297 -LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 G S++ + LF GAKE + +Y K I F+ ID+GWFY + KP+F +S+FY Sbjct: 301 NSDGGSLSVVHHLFLGAKEVKLLDYYAKKYNIKLFDRAIDFGWFYILTKPLFYTLSFFYK 360 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 GNFG++I++ T+ +K++ F + + Y S M+++QP+I L+E + + L + + Sbjct: 361 YCGNFGVSILIVTILIKIMMFSFSNRSYSSMKKMRDLQPRIQRLQELYGDDKIK-LHQEI 419 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LYK ++ L+Q+P+FF++YKV+ +++EMRHAPF+ WIKDL+A DPT IF Sbjct: 420 MALYKKEKVSLAGSFLQSLIQLPIFFSLYKVLHVTIEMRHAPFFIWIKDLSALDPTCIFN 479 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAMILNWMPVVFVFALSSF 534 LFG+LPF++P F+++G WPI+ S +M +Q K++ P AD QA +L +MP++ + ++F Sbjct: 480 LFGLLPFHVPWFLNIGAWPILTSATMMLQQKINPAPAADPAQAQVLKFMPLILLIVFNNF 539 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGA 562 PAGL+IYW+W+N++SIVQQ +I K++ Sbjct: 540 PAGLLIYWTWNNILSIVQQFIINKINNK 567 >gi|237729027|ref|ZP_04559508.1| inner membrane protein oxaA [Citrobacter sp. 30_2] gi|226909649|gb|EEH95567.1| inner membrane protein oxaA [Citrobacter sp. 30_2] Length = 548 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 142/589 (24%), Positives = 262/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + +L Y ++ S P L + + Sbjct: 49 DQGVPASGQGKLITVKTDVLDLTINTRGGDVEQASLPAYPKELGSTEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTIS 173 Y A+ N + I + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVDKDAFVLADGQNELQIPMTYTDAAGNTFTKTFV 166 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + +V N + S G++ + T ++ F + G Sbjct: 167 LKRGEYAVNVNYSVQNAGEKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I ++ N + + W+ + +Y+A+ ++P + + + F + G+ Sbjct: 227 DEKYEKYKFDTIAENENLNVNAKDGWVAMLQQYFATAWVPRNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKN 547 >gi|261250645|ref|ZP_05943220.1| OxaI/YidC membrane insertion protein [Vibrio orientalis CIP 102891] gi|260939214|gb|EEX95201.1| OxaI/YidC membrane insertion protein [Vibrio orientalis CIP 102891] Length = 541 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 151/572 (26%), Positives = 259/572 (45%), Gaps = 46/572 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + ++ + + Q S+A L Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQW----QVAKNPTPQPVEQAQSSSTLPAPSFADELDPA 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AQ + + + + L SI+ G + +L Y ++ S P V L + + + + Sbjct: 56 PAQQQASAKTITVTTDVLTLSIDTVGGDVINADLNQYSNELDSEDPFVLLKNEAG--HQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I+L ++N +S T I + F AN + + +T + Sbjct: 114 IAQSGLVGPQG-IDLSSTNRPAYSVSADSFTLADGQDELRIPMTFT-ANGLEYTKTFVMK 171 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y + + N S + F + + + T G D + Sbjct: 172 RGSYAIDVEYDIVNKSGNNATFGMYAHLRQSLLDAGGSITMPTYRGGAYSTEDTRYKKYS 231 Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S N W + Y+AS +IP E + + + + Sbjct: 232 FDDMQDRNLSLNLANGQGWAAMIQHYFASAWIPRNEPGANLYTRVIGNLGD---IGVRMP 288 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G S L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 289 NKTIADGDSANFQATLWVGPKLQDQMAEV-----APNLDLVVDYGWLWFIAKPLHTLLSF 343 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 344 IQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMS 402 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 403 QEMMELYKKEKVNPLGGCLPLVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY 462 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 IL-------------------PLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFF 503 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 504 LFFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 535 >gi|283836139|ref|ZP_06355880.1| hypothetical protein CIT292_10561 [Citrobacter youngae ATCC 29220] gi|291068329|gb|EFE06438.1| membrane protein insertase, YidC/Oxa1 family [Citrobacter youngae ATCC 29220] Length = 548 Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 144/589 (24%), Positives = 264/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + +L Y ++ S P L + + Sbjct: 49 DQGVPASGQGKLITVKTDVLDLTINTRGGDVEQASLPAYPKELGSTEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + I + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQIPMTYTDAAGNTFTKTFV 166 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + +V N + S G++ + T ++ F + G Sbjct: 167 LKRGEYAVNVNYSVQNAGEKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I ++ N + + W+ + +Y+A+ ++P + + + F + G+ Sbjct: 227 DEKYEKYKFDTIAENENLNVNAKDGWVAMLQQYFATAWVPRNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKN 547 >gi|293393717|ref|ZP_06638025.1| YidC/Oxa1 family membrane protein insertase [Serratia odorifera DSM 4582] gi|291423761|gb|EFE96982.1| YidC/Oxa1 family membrane protein insertase [Serratia odorifera DSM 4582] Length = 544 Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 143/587 (24%), Positives = 252/587 (42%), Gaps = 62/587 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S +I AWQ + + + N T +Q Sbjct: 4 QRNLLLIALLFVSFMIWQAWQTDHAPQPAAQTTQQTTNAATGDAASQA------------ 51 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A + + L +IN +G + L Y + S++P L + Y Sbjct: 52 VPASGQGKLITVNTDVLSLTINTRGGDIEQAKLLAYPDTLGSSTPFQLL--ETTPSFVYQ 109 Query: 122 AELDYVS--------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + + L G+ I L + + + + +T Sbjct: 110 AQSGLTGKNGPDNPANGERPLFQAAQDTFTLADGQ---DELRIPLTYT-RDGVEYTKTFV 165 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227 L + Y + +V N + S G++ + T +N F + A Sbjct: 166 LKRNHYAVGVDYSVNNKGTTPLELSLFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSTS 225 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 +KY+ +K N W+ + +Y+A+ ++P+ T + F G Sbjct: 226 ETKYEKYA-FDKDENLNVSTQGGWVAMLQQYFATAWVPA--TQGTNTFYTAKPGDNLSTI 282 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F A + + PG L+ G + + P ++ +D+GW +FI++P+F Sbjct: 283 GFKATPVVVQPGAQQQLNATLWVGPELQDQMAQL-----APHLDLTVDYGWLWFISQPLF 337 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 338 KLLKFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK 397 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 398 -QRMSQEMMALYKAEKVNPLGGCLPLIIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 456 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 457 QDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 497 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 498 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSREKKK 543 >gi|15603030|ref|NP_246102.1| putative inner membrane protein translocase component YidC [Pasteurella multocida subsp. multocida str. Pm70] gi|38503177|sp|Q9CLQ2|OXAA_PASMU RecName: Full=Inner membrane protein oxaA gi|12721513|gb|AAK03249.1| YidC [Pasteurella multocida subsp. multocida str. Pm70] Length = 541 Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 151/574 (26%), Positives = 260/574 (45%), Gaps = 51/574 (8%) Query: 1 ME--RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ R+ + +S ++ WQ Y P+ + + + A Sbjct: 1 MDSRRSLLVIALLFISFLVYQQWQLDYHTPKPVATEQVKVSSDVPASSASSSSDIATT-- 58 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + + L+N ++ G L Y +++SN+P L + +N + Sbjct: 59 -----AQAQGRIITLENDVFRLEVDTLGGDVVHSELLKYDAELNSNTPFTLLTNKAN--H 111 Query: 119 AYFAELDYVST------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ V A + L G+ + VF+ + + F + Sbjct: 112 VYIAQSGLVGKDGIDTKAGRANYQVDGDTFKLADGQ---NELAVPFVFE-KDGVTFRKIF 167 Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLV 230 L Y + + N S I P G++ + N G + + Sbjct: 168 VLKRGAYDIAVNFEIDNQSDKTIEVEPYGQLRHTLVEDTGNVAMPTYTGGAYSSSETNYK 227 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + ++D+EK+++S W+ + Y+ S +IP+++ + + + Sbjct: 228 KYSFADMEKANLS-ISTKAGWVAVLQHYFVSAWIPNQDADNQ-LYSLTDKANNLASIGYR 285 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 I G T + L+ G K + ++ +D+GW +FIAKP+F L+ Sbjct: 286 GPVTAIPAGAKETIRSSLWTGPKLQDQMATVAN-----HLDLSVDYGWAWFIAKPLFWLL 340 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++ ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F + Q Sbjct: 341 TFIQSIVQNWGLAIIGVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERFGED-RQR 399 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 400 MSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDP 459 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PI+M SMF+ KMSP P AD Q I+N+MP++F+ Sbjct: 460 YYIL-------------------PILMGASMFLLQKMSPTPVADPTQQKIMNFMPLIFMV 500 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+I+I QQ +I + + Sbjct: 501 FFLWFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|197333980|ref|YP_002154775.1| inner membrane protein OxaA [Vibrio fischeri MJ11] gi|197315470|gb|ACH64917.1| inner membrane protein OxaA [Vibrio fischeri MJ11] Length = 541 Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 143/575 (24%), Positives = 249/575 (43%), Gaps = 51/575 (8%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N +A+AL S ++ WQ + ++ ++ P + Sbjct: 1 MDTQRNILLLALALVSFLLFQQWQVETNPQQPATVSTVQQTQTDGDVPTS-----STANS 55 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + + + L ++ G + L Y ++ S + V L ++ + Sbjct: 56 DTPADSAQSDKLITITTDVLTLKVDTLGGDIIESVLNKYDAELDSKAKFVLL--KNDATH 113 Query: 119 AYFAELDYVSTAN------NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 +Y A+ + + T + L G+ + L + I + +T+ Sbjct: 114 SYVAQSGLIGPQGIDSNSGRAQFTAQKTDYVLAEGQ---NELRVPLTLV-KDGITYTKTL 169 Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLV 230 L + Y + TV N S + ++ + T G D Sbjct: 170 ILKRDSYAIDVDYTVDNQSSAPATVEMYTNLKQNLMDDGGSLTMPTYRGAAYSTEDTRYK 229 Query: 231 EQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + + D+E ++S + W G+ Y+AS +IP + D Sbjct: 230 KYSFDDMEDKNLSIDMTNGQGWAGMLQHYFASAWIPRNVNDAKLTSRVAGDYGY---IGV 286 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 +TI G+ T + L+ G K + P ++ +D+GW +FIA P+ L Sbjct: 287 RMPSVTIPAGQEATLSATLWTGPKLQKEMAA-----TAPYLDLTVDYGWLWFIASPLHKL 341 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S+ +V N+G+AI++ T V+ +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 342 LSFIQGIVVNWGLAIIVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGDD-RQ 400 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M++LYK +NPL GC PILLQ+P+F ++Y + S+E+RH PF+GWI DL+A D Sbjct: 401 RMSQEMMELYKKEKVNPLGGCLPILLQMPIFISLYWALMESVELRHTPFFGWITDLSAQD 460 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I P++M SMF+ KMSP D Q I+ +MPV+F Sbjct: 461 PYYIL-------------------PLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFT 501 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + + Sbjct: 502 VFFLWFPSGLVLYWLVSNIVTLIQQTLIYRALEKK 536 >gi|28896777|ref|NP_796382.1| putative inner membrane protein translocase component YidC [Vibrio parahaemolyticus RIMD 2210633] gi|153838490|ref|ZP_01991157.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ3810] gi|260361953|ref|ZP_05774958.1| inner membrane protein OxaA [Vibrio parahaemolyticus K5030] gi|260876536|ref|ZP_05888891.1| inner membrane protein OxaA [Vibrio parahaemolyticus AN-5034] gi|260897407|ref|ZP_05905903.1| inner membrane protein OxaA [Vibrio parahaemolyticus Peru-466] gi|260901105|ref|ZP_05909500.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ4037] gi|38502972|sp|Q87TR5|OXAA_VIBPA RecName: Full=Inner membrane protein oxaA gi|28804985|dbj|BAC58266.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus RIMD 2210633] gi|149748113|gb|EDM58972.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ3810] gi|308087936|gb|EFO37631.1| inner membrane protein OxaA [Vibrio parahaemolyticus Peru-466] gi|308090400|gb|EFO40095.1| inner membrane protein OxaA [Vibrio parahaemolyticus AN-5034] gi|308108175|gb|EFO45715.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ4037] gi|308114149|gb|EFO51689.1| inner membrane protein OxaA [Vibrio parahaemolyticus K5030] Length = 540 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 151/572 (26%), Positives = 259/572 (45%), Gaps = 46/572 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + ++ + + Q + S+A L Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQW----QVAKNPAPQAVEQAQSSSSLPAPSFADELDPV 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Q + + + + L SI+ G +L Y ++ S+ P V L + + Sbjct: 56 PGQQQASAKTITVTTDVLTLSIDTVGGDVVHADLNQYSAELDSSDPFVLL--KDTQGHQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I+L +SN +S T + + F AN I + +T L Sbjct: 114 IAQSGLVGPQG-IDLSSSNRPHYNVSADSFTLADGQDELRVPMTFT-ANGIEYTKTYVLK 171 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y + V NNS + F + ++ + T G D + Sbjct: 172 RGSYALNVEYDVANNSGNNATFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYS 231 Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S N + W + Y+A+ +IP E + + + + Sbjct: 232 FEDMQDRNLSINLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMP 288 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G L+ G K + P ++++D+GW +FIAKP+ L+++ Sbjct: 289 NKTIATGDQAKFEATLWVGPKLQQEMAAV-----APNLDLVVDYGWLWFIAKPLHSLLAF 343 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 344 IQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMS 402 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 403 QEMMELYKKEKVNPLGGCLPLVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY 462 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 IL-------------------PLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFF 503 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 504 LFFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 535 >gi|262040469|ref|ZP_06013712.1| YidC/Oxa1 family membrane protein insertase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042222|gb|EEW43250.1| YidC/Oxa1 family membrane protein insertase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 548 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 148/588 (25%), Positives = 255/588 (43%), Gaps = 56/588 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN G + L Y + S P L + + Y Sbjct: 50 GVPASGQGKLITVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLL--ETTPQFVY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ N + + I L + + +F +T +L Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYNVDKEAFVLADGQDELVIPLTYTDKAGNVFTKTFTLK 167 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIM--------RHKPQTATNTFGVQEGFIAVLGD 226 Y + +V N S + S G++ R +T G D Sbjct: 168 RGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTAD 227 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + K+ I + N N W+ + +Y+ + ++P + + F + G+ Sbjct: 228 SKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPRNNGTNN--FYTANLGNGVVA 285 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + + + PG++ + L+ G + P ++ +D+GW +FI++P+ Sbjct: 286 IGYKSQPVLVQPGQTDKLQSTLWVGPAIQDKMAAV-----APHLDLTVDYGWLWFISQPL 340 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 FKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+ Sbjct: 401 K-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLS 459 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A DP I PIIM +MF KMSP D Q I+ +MPV Sbjct: 460 AQDPYYIL-------------------PIIMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 500 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +F FP+GL++Y+ SN+++I+QQ +I + + GL +R + Sbjct: 501 IFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR-GLEKRGLHNREKKK 547 >gi|330447273|ref|ZP_08310923.1| inner-membrane protein insertion factor [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491464|dbj|GAA05420.1| inner-membrane protein insertion factor [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 544 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 147/570 (25%), Positives = 252/570 (44%), Gaps = 46/570 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S ++ W P+ + ++ Q P+ Sbjct: 4 QRNILLIALLFVSFLLFQQWNAD-KNPQPQGQGVAQQASQNSDIPSHSGEGQP------L 56 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 S + +K L +++ G D L Y+ + S P V L + + Y Sbjct: 57 TDQTSSQNLITIKTDVLELTVDTLGGDVVDAKLLKYNNTLGSKDPFVLLSDTNG--HDYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N +++ + + + + F + I + +T L + Sbjct: 115 AQSGLIGPNGADSQQNGRAQYSVTAKDFVMGPEQNELRVPMTFT-KDGISYTKTFVLKRN 173 Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG--DKSLVEQKY 234 Y + TV NN+ ++ RHK + + + D + + Sbjct: 174 DYAVNVDYTVANNTDKAASVQMYAQL-RHKLSDSGGSLTMPTYLGGAYSANDTKYKKYSF 232 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++ + + W I Y+ S +IP SQ + Y Sbjct: 233 DDMKDKNL-DVAANEGWAAIMQHYFVSAWIPRDGADQTSQVYSTTSNGNGY-IGVRMPIE 290 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 T+ PG+S L+ G K + K+L + +D+GW +FIA P+ L+S+ + Sbjct: 291 TVAPGQSKEIKATLWVGPKLQNEMAATAKNLN-----LTVDYGWLWFIASPLHKLLSFIH 345 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++VGN+GIAI++ T V+ +PL K QY S A M+ +QPKI +RE+ Q + + Sbjct: 346 SIVGNWGIAIIVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD-RQRMSQE 404 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RHAPF+GWI DL+A DP + Sbjct: 405 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHAPFFGWIHDLSAQDPYYVL 464 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 PI+M ++MF KMSP D Q I+ +MPV+F F Sbjct: 465 -------------------PILMGITMFFIQKMSPSTVTDPMQQKIMTFMPVMFTFFFLF 505 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + + Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTIIFRQLEKK 535 >gi|22127984|ref|NP_671407.1| putative inner membrane protein translocase component YidC [Yersinia pestis KIM 10] gi|45443732|ref|NP_995271.1| putative inner membrane protein translocase component YidC [Yersinia pestis biovar Microtus str. 91001] gi|51598232|ref|YP_072423.1| inner membrane protein translocase component YidC [Yersinia pseudotuberculosis IP 32953] gi|108810137|ref|YP_654053.1| putative inner membrane protein translocase component YidC [Yersinia pestis Antiqua] gi|108814119|ref|YP_649886.1| putative inner membrane protein translocase component YidC [Yersinia pestis Nepal516] gi|145601170|ref|YP_001165246.1| putative inner membrane protein translocase component YidC [Yersinia pestis Pestoides F] gi|150260964|ref|ZP_01917692.1| probable membrane protein [Yersinia pestis CA88-4125] gi|153949944|ref|YP_001403098.1| inner membrane protein translocase component YidC [Yersinia pseudotuberculosis IP 31758] gi|162421152|ref|YP_001608452.1| putative inner membrane protein translocase component YidC [Yersinia pestis Angola] gi|165926088|ref|ZP_02221920.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. F1991016] gi|165939954|ref|ZP_02228491.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. IP275] gi|166009619|ref|ZP_02230517.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. E1979001] gi|166213212|ref|ZP_02239247.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. B42003004] gi|167401618|ref|ZP_02307112.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422864|ref|ZP_02314617.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425533|ref|ZP_02317286.1| inner membrane protein OxaA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170026450|ref|YP_001722955.1| putative inner membrane protein translocase component YidC [Yersinia pseudotuberculosis YPIII] gi|186897490|ref|YP_001874602.1| putative inner membrane protein translocase component YidC [Yersinia pseudotuberculosis PB1/+] gi|218931078|ref|YP_002348953.1| putative inner membrane protein translocase component YidC [Yersinia pestis CO92] gi|229839809|ref|ZP_04459968.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841894|ref|ZP_04462050.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis biovar Orientalis str. India 195] gi|229896771|ref|ZP_04511934.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis Pestoides A] gi|229904659|ref|ZP_04519770.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis Nepal516] gi|270488370|ref|ZP_06205444.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Yersinia pestis KIM D27] gi|38503118|sp|Q8Z9U3|OXAA_YERPE RecName: Full=Inner membrane protein oxaA gi|21961130|gb|AAM87658.1|AE014013_3 60 kDa inner-membrane protein [Yersinia pestis KIM 10] gi|45438602|gb|AAS64148.1| probable membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51591514|emb|CAH23186.1| Oxa1 family transporter [Yersinia pseudotuberculosis IP 32953] gi|108777767|gb|ABG20286.1| protein translocase subunit yidC [Yersinia pestis Nepal516] gi|108782050|gb|ABG16108.1| protein translocase subunit yidC [Yersinia pestis Antiqua] gi|115349689|emb|CAL22670.1| probable membrane protein [Yersinia pestis CO92] gi|145212866|gb|ABP42273.1| protein translocase subunit yidC [Yersinia pestis Pestoides F] gi|149290372|gb|EDM40449.1| probable membrane protein [Yersinia pestis CA88-4125] gi|152961439|gb|ABS48900.1| inner membrane protein OxaA [Yersinia pseudotuberculosis IP 31758] gi|162353967|gb|ABX87915.1| inner membrane protein OxaA [Yersinia pestis Angola] gi|165912080|gb|EDR30720.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. IP275] gi|165921948|gb|EDR39125.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. F1991016] gi|165991541|gb|EDR43842.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. E1979001] gi|166205510|gb|EDR49990.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. B42003004] gi|166958256|gb|EDR55277.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049000|gb|EDR60408.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055547|gb|EDR65340.1| inner membrane protein OxaA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752984|gb|ACA70502.1| 60 kDa inner membrane insertion protein [Yersinia pseudotuberculosis YPIII] gi|186700516|gb|ACC91145.1| 60 kDa inner membrane insertion protein [Yersinia pseudotuberculosis PB1/+] gi|229678777|gb|EEO74882.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis Nepal516] gi|229691233|gb|EEO83286.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis biovar Orientalis str. India 195] gi|229696175|gb|EEO86222.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700209|gb|EEO88245.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis Pestoides A] gi|270336874|gb|EFA47651.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Yersinia pestis KIM D27] gi|320017432|gb|ADW01004.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 546 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 149/589 (25%), Positives = 261/589 (44%), Gaps = 63/589 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S +I AWQ + + N T + +Q Sbjct: 4 QRNLLLIALLFVSFMIWQAWQVDNNPQPTAQTTQQTTNTATGDKASQA------------ 51 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + +K L +IN +G + NL Y + S++ L + Y Sbjct: 52 VPGSGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDTLGSSNTFELL--ETTPSFVYQ 109 Query: 122 AELDYVS--------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + T + L G+ I L F + + +F +T Sbjct: 110 AQSGLTGKNGPDNPANGDRPLFEVPQTSFVLADGQ---DELRIPLTFTSKDGSVFIKTFV 166 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG-- 225 L + Y + V N S + + G++ + K T +N F +Q A Sbjct: 167 LKRNDYAIGVDYHVNNASAAPLELTLFGQLKQSINLPKKRDTGSNNFALQTYRGAAYSSD 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + +SDIE ++ + W+ + +Y+A+ +IP+ + F G+ Sbjct: 227 ETKYKKYSFSDIEDKNL-DITTKGGWVAMLQQYFATAWIPAANE--TNTFYSAELGNGLA 283 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 F + I PG+ + L+ G + + P ++ +D+GW +FI++P Sbjct: 284 AIGFKGAPVVIQPGEQKQLSATLWVGPEIQNKMAEI-----APHLDLTVDYGWLWFISQP 338 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 339 LFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGD 398 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 399 DK-QRMSQEMMALYKAEKVNPLGGCLPLIIQMPIFLALYYMLMSSVELRHAPFILWIHDL 457 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++M+ KMSP D Q I+ +MP Sbjct: 458 SAQDPYYIL-------------------PILMGITMYFIQKMSPTTVTDPMQQKIMTFMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FPAGL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 499 VIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHSREKKK 546 >gi|328471231|gb|EGF42133.1| membrane protein insertase [Vibrio parahaemolyticus 10329] Length = 540 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 151/572 (26%), Positives = 258/572 (45%), Gaps = 46/572 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + ++ + + Q S+A L Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQW----QVAKNPAPQAVEQAQSSSTLPAPSFADELDPV 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Q + + + + L SI+ G +L Y ++ S+ P V L + + Sbjct: 56 PGQQQASAKTITVTTDVLTLSIDTVGGDVVHADLNQYSAELDSSDPFVLL--KDTQGHQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I+L +SN +S T + + F AN I + +T L Sbjct: 114 IAQSGLVGPQG-IDLSSSNRPHYNVSADSFTLADGQDELRVPMTFT-ANGIEYTKTYVLK 171 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y + V NNS + F + ++ + T G D + Sbjct: 172 RGSYALNVEYDVANNSGNNATFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYS 231 Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S N + W + Y+A+ +IP E + + + + Sbjct: 232 FEDMQDRNLSINLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMP 288 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G L+ G K + P ++++D+GW +FIAKP+ L+++ Sbjct: 289 NKTIATGDQAKFEATLWVGPKLQQEMAAV-----APNLDLVVDYGWLWFIAKPLHSLLAF 343 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 344 IQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMS 402 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 403 QEMMELYKKEKVNPLGGCLPLVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY 462 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 IL-------------------PLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFF 503 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 504 LFFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 535 >gi|52424536|ref|YP_087673.1| putative inner membrane protein translocase component YidC [Mannheimia succiniciproducens MBEL55E] gi|81691469|sp|Q65VC2|OXAA_MANSM RecName: Full=Inner membrane protein oxaA gi|52306588|gb|AAU37088.1| YidC protein [Mannheimia succiniciproducens MBEL55E] Length = 540 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 143/574 (24%), Positives = 265/574 (46%), Gaps = 52/574 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V + +S ++ WQ Y P+ + + P ++ V Sbjct: 1 MDSRRSLLVLALLFISFLVYEQWQMDYNTPKPVATEQAQAVSSNAEMPASTSSTEGTV-- 58 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 ++ + ++N ++ G + +L Y +++S++ + L + N Sbjct: 59 ----DNVAQGKIISIQNDVFTLKVDTLGGDVVESSLTNYAAELNSDARFILLQNKPN--E 112 Query: 119 AYFAELDYVST------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ + A + L G+ + L + + +++ + Sbjct: 113 VYVAQSGLIGKNGIDTKAGRAAYQVEAEQFTLADGQ---NELRVPLTLE-KDGVIYRKVF 168 Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGDKSLV 230 + Y ++ + N + + I P G++ Q++ + G D + Sbjct: 169 VIKAGSYDIEVNYEIQNQTNEAIEVQPYGQLKHTLVQSSGSMAMPTYTGGAYSSADTNYK 228 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + +++ ++S W+ + Y+ S +IP+++ Y S + + Sbjct: 229 KYSFDEMKDKNLS-IDTKAGWVAVLQHYFVSAWIPNQDADNQL---YTSTANGLGFIGYR 284 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + + G S T + L+ G K + ++ +D+GW +FIAKP+F L+ Sbjct: 285 GPVVNVPAGGSETIKSALWTGPKLQNEMGAVAN-----HLDLTVDYGWAWFIAKPLFWLL 339 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q Sbjct: 340 NVIQSIVSNWGLAIIGVTIVVKGILYPLTKAQYTSMAKMRMLQPKLQEMRERFGDD-RQR 398 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M++LYK +NPL GC P+L+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 399 MSQEMMKLYKEEKVNPLGGCLPLLIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDP 458 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PI+M SMF+ KMSP P AD Q I+N+MP++F+ Sbjct: 459 YYIL-------------------PILMGASMFLLQKMSPTPVADPMQQKIMNFMPLIFMV 499 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW SN+I+IVQQ +I + + Sbjct: 500 FFLWFPAGLVLYWLVSNIITIVQQQLIYRGLEKK 533 >gi|152972613|ref|YP_001337759.1| putative inner membrane protein translocase component YidC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238897216|ref|YP_002921964.1| putative inner membrane protein translocase component YidC [Klebsiella pneumoniae NTUH-K2044] gi|330005210|ref|ZP_08305169.1| membrane protein insertase, YidC/Oxa1 family domain protein [Klebsiella sp. MS 92-3] gi|166975872|sp|A6TG08|OXAA_KLEP7 RecName: Full=Inner membrane protein oxaA gi|150957462|gb|ABR79492.1| inner membrane protein translocase component YidC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549546|dbj|BAH65897.1| inner membrane protein translocase component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328536342|gb|EGF62704.1| membrane protein insertase, YidC/Oxa1 family domain protein [Klebsiella sp. MS 92-3] Length = 548 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 148/588 (25%), Positives = 254/588 (43%), Gaps = 56/588 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN G + L Y + S P L + + Y Sbjct: 50 GVPASGQGKLITVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLL--ETTPQFVY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ N + + I L + + +F +T +L Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYNVDKEAFVLADGQDELVIPLTYTDKAGNVFTKTFTLK 167 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIM--------RHKPQTATNTFGVQEGFIAVLGD 226 Y + +V N S + S G++ R +T G D Sbjct: 168 RGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTAD 227 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + K+ I + N N W+ + +Y+ + ++P + + F + G+ Sbjct: 228 SKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPRNNGTNN--FYTANLGNGVVA 285 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + + + PG++ + L+ G + P ++ +D+GW +FI++P+ Sbjct: 286 IGYKSQPVLVQPGQTDKLQSTLWVGPAIQDKMAAV-----APHLDLTVDYGWLWFISQPL 340 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 FKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+ Sbjct: 401 K-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLS 459 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A DP I PIIM +MF KMSP D Q I+ +MPV Sbjct: 460 AQDPYYIL-------------------PIIMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 500 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 501 IFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|56480409|ref|NP_709495.2| putative inner membrane protein translocase component YidC [Shigella flexneri 2a str. 301] gi|33300911|sp|P59783|OXAA_SHIFL RecName: Full=Inner membrane protein oxaA gi|56383960|gb|AAN45202.2| 60 KD inner-membrane protein [Shigella flexneri 2a str. 301] gi|281603068|gb|ADA76052.1| Inner membrane protein oxaA [Shigella flexneri 2002017] gi|332750526|gb|EGJ80935.1| inner membrane protein oxaA [Shigella flexneri K-671] gi|332751712|gb|EGJ82110.1| inner membrane protein oxaA [Shigella flexneri 2747-71] Length = 548 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 142/589 (24%), Positives = 262/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 Y A+ + ++N+ + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|209693637|ref|YP_002261565.1| putative inner membrane protein translocase component YidC [Aliivibrio salmonicida LFI1238] gi|254772743|sp|B6EP40|OXAA_ALISL RecName: Full=Inner membrane protein oxaA gi|208007588|emb|CAQ77688.1| inner membrane protein [Aliivibrio salmonicida LFI1238] Length = 541 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 149/575 (25%), Positives = 257/575 (44%), Gaps = 51/575 (8%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N +A+AL S ++ WQ + ++ ++ + P + A + Sbjct: 1 MDTQRNILLLALALVSFLLFQQWQVETNPQQPATVSTVQQTHKNGDVPTSSTANSDAPVD 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 ++ L + + L ++ G + L Y ++ S + V L ++ + Sbjct: 61 SAQSDKL-----ITITTDVLTLKVDTLGGDIIESVLNKYDAELDSKAKFVLL--KNDADH 113 Query: 119 AYFAELDYVSTAN------NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 +Y A+ + + T + L G+ I L + N I + +T+ Sbjct: 114 SYIAQSGLIGPQGIDSNTGRAQFTAKKTDYVLADGQ---NELRIPLTLE-KNGITYTKTL 169 Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLV 230 + + Y + TV N S + ++ + T G D Sbjct: 170 IVKRDSYAIDVEYTVNNQSSAPATVEMYANLKQNLLDDGGSLTMPTYRGGAYSTEDTRYK 229 Query: 231 EQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + + D+E ++S + W G+ Y+AS +IP + D Sbjct: 230 KYSFDDMEDKNLSIDMTNGQGWAGMLQHYFASAWIPRNVNDATLTTRVAGDYGY---IGV 286 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 +TI G+ T T L+ G K P + K ++ +D+GW +FIA P+ L Sbjct: 287 RMPSVTIPAGQEDTLTATLWTGPKLQPQMAATAK-----YLDLSVDYGWLWFIASPLHKL 341 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S+ ++VGN+G+AIM+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 342 LSFIQSIVGNWGLAIMILTFIVRGAMYPLTKAQYTSMAKMRMLQPKLAAMRERIGDD-RQ 400 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M++LYK +NPL GC PI+LQ+P+F ++Y + S+E+RHAPF+GWI DL+A D Sbjct: 401 RMSQEMMELYKKEKVNPLGGCLPIVLQMPIFISLYWALMESVELRHAPFFGWITDLSAQD 460 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I P++M SMF+ KMSP D Q I+ ++PV+F Sbjct: 461 PYYIL-------------------PLLMGASMFLIQKMSPTTVTDPMQQKIMTFIPVMFT 501 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW SNV++++QQ +I + + Sbjct: 502 VFFLWFPAGLVLYWLVSNVVTLIQQTLIYRALEKK 536 >gi|16131573|ref|NP_418161.1| membrane protein insertase [Escherichia coli str. K-12 substr. MG1655] gi|89110307|ref|AP_004087.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli str. K-12 substr. W3110] gi|170083207|ref|YP_001732527.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli str. K-12 substr. DH10B] gi|188495796|ref|ZP_03003066.1| membrane protein OxaA [Escherichia coli 53638] gi|191165799|ref|ZP_03027637.1| inner membrane protein OxaA [Escherichia coli B7A] gi|238902796|ref|YP_002928592.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli BW2952] gi|254038924|ref|ZP_04872976.1| inner membrane protein oxaA [Escherichia sp. 1_1_43] gi|256025563|ref|ZP_05439428.1| putative inner membrane protein translocase component YidC [Escherichia sp. 4_1_40B] gi|300917465|ref|ZP_07134125.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 115-1] gi|300947533|ref|ZP_07161710.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 116-1] gi|300956289|ref|ZP_07168591.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 175-1] gi|301028499|ref|ZP_07191739.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 196-1] gi|301644378|ref|ZP_07244379.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 146-1] gi|307140406|ref|ZP_07499762.1| putative inner membrane protein translocase component YidC [Escherichia coli H736] gi|309795745|ref|ZP_07690160.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 145-7] gi|331644430|ref|ZP_08345559.1| inner membrane protein OxaA [Escherichia coli H736] gi|331655367|ref|ZP_08356366.1| inner membrane protein OxaA [Escherichia coli M718] gi|398974|sp|P25714|OXAA_ECOLI RecName: Full=Inner membrane protein oxaA gi|254772780|sp|B1X9T4|OXAA_ECODH RecName: Full=Inner membrane protein oxaA gi|259515689|sp|C4ZYY3|OXAA_ECOBW RecName: Full=Inner membrane protein oxaA gi|290553|gb|AAA62056.1| 60 kD protein [Escherichia coli] gi|1790140|gb|AAC76728.1| membrane protein insertase [Escherichia coli str. K-12 substr. MG1655] gi|85676338|dbj|BAE77588.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli str. K12 substr. W3110] gi|169891042|gb|ACB04749.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli str. K-12 substr. DH10B] gi|188490995|gb|EDU66098.1| membrane protein OxaA [Escherichia coli 53638] gi|190904123|gb|EDV63834.1| inner membrane protein OxaA [Escherichia coli B7A] gi|226838889|gb|EEH70916.1| inner membrane protein oxaA [Escherichia sp. 1_1_43] gi|238860712|gb|ACR62710.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli BW2952] gi|260451437|gb|ACX41859.1| YidC translocase/secretase [Escherichia coli DH1] gi|299878461|gb|EFI86672.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 196-1] gi|300316876|gb|EFJ66660.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 175-1] gi|300415269|gb|EFJ98579.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 115-1] gi|300452870|gb|EFK16490.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 116-1] gi|301077319|gb|EFK92125.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 146-1] gi|308120624|gb|EFO57886.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 145-7] gi|309704153|emb|CBJ03500.1| inner membrane protein [Escherichia coli ETEC H10407] gi|315138290|dbj|BAJ45449.1| putative inner membrane protein translocase component [Escherichia coli DH1] gi|323934943|gb|EGB31321.1| membrane protein insertase [Escherichia coli E1520] gi|331036724|gb|EGI08950.1| inner membrane protein OxaA [Escherichia coli H736] gi|331047382|gb|EGI19460.1| inner membrane protein OxaA [Escherichia coli M718] Length = 548 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 142/589 (24%), Positives = 262/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 Y A+ + ++N+ + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|269962686|ref|ZP_06177031.1| inner membrane protein, 60 kDa [Vibrio harveyi 1DA3] gi|269832609|gb|EEZ86723.1| inner membrane protein, 60 kDa [Vibrio harveyi 1DA3] Length = 540 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 149/572 (26%), Positives = 257/572 (44%), Gaps = 46/572 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + ++ + + Q S+A L Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQW----QVAKNPAPQAVEQAQSSSTLPAPSFADDLDPV 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Q + + + + L SI+ G +L Y ++ S+ P V L + + Sbjct: 56 PGQQQASAKTITVTTDVLTLSIDTVGGDVVHADLNKYAAELDSSDPFVLLKDTKG--HQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I+L ++N +S T + + F AN I + +T Sbjct: 114 IAQSGLVGPQG-IDLSSTNRPHYNVSADSFTLADGQDELRVPMTFT-ANGIEYIKTYVFK 171 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y + V NNS + F + ++ + T G D + Sbjct: 172 RGSYALNVEYDVVNNSGNNATFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDVRYKKYS 231 Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S N + W + Y+A+ +IP E + + + + Sbjct: 232 FEDMQDRNLSINLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMP 288 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G L+ G K + P ++++D+GW +FIAKP+ L+++ Sbjct: 289 NKTIATGDQAKFEATLWVGPKLQNEMAAV-----APNLDLVVDYGWLWFIAKPLHSLLAF 343 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 344 IQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMS 402 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 403 QEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY 462 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 IL-------------------PLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFF 503 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 504 LFFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 535 >gi|57239041|ref|YP_180177.1| putative inner membrane protein translocase component YidC [Ehrlichia ruminantium str. Welgevonden] gi|57161120|emb|CAH58031.1| putative integral membrane protein [Ehrlichia ruminantium str. Welgevonden] Length = 575 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 212/581 (36%), Positives = 336/581 (57%), Gaps = 25/581 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N A+ LSV+I+ W+ Y E+ + ++ + + + Sbjct: 1 MLEIRNLVFAVVLSVLIMMGWRLVY-----EKFFTVQHVVEDEDSSSMIPEIDNVLTYRS 55 Query: 61 RAQALSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R + + + RV+L N + GSI+LKGAQ DDL + YH+ S+S + LLSP NT+ Sbjct: 56 RNEIIDSTQNLRVKLSNKEINGSISLKGAQLDDLVFKNYHITPDSSSDGIILLSPENTEG 115 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YF E ++ + I +PN + W +L+P + L + N ++F+ ++LD++Y Sbjct: 116 VYFIEFGWIDPQHKIVVPNQLSTWTS-DKSVLSPNNTVTLTWDNQQGVIFQIKVTLDDYY 174 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +FKI + NN+ + + P GRI R + T + + EG + G +L E Y +I Sbjct: 175 MFKIEQIIINNTDNVVNLIPYGRINRARHTTEKSYWISHEGAVGSFG-YTLKEWTYKNII 233 Query: 239 KSSISNF----HESNSWLGISDKYWASVFIP---SKETSFHSQFKYLS-DGHARYQAKFS 290 K + N W+GI+DKYW + IP K++ K+ + R+Q FS Sbjct: 234 KERNIKISQQNTDDNQWVGIADKYWFTALIPNILQKKSKLSFHVKHGKYNNEDRFQVDFS 293 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + + P K+ ++T++LFAGAKE + Y+KDL I F+ +D+G YFI KP+F+L+ Sbjct: 294 HDSYSAYPNKTASSTSYLFAGAKELKLLDKYKKDLNISLFDKAVDFGILYFITKPVFLLL 353 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 YFY+L+GNFG+AI+L T+ +KL+ FPL+ K YVS +K +QP+I +++E +K + Sbjct: 354 EYFYDLIGNFGLAILLLTIVIKLIMFPLSYKSYVSMFKLKYLQPEILKIKELYKNDNTK- 412 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + K + L+K ++++P++G PIL+QIPVFFA+YKV+ +++EMRHAPF+ W+KDL+ D Sbjct: 413 MSKEVSLLFKKNDVSPMSGFIPILIQIPVFFALYKVLFVTIEMRHAPFYLWVKDLSNFDT 472 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPADKGQAMILNWMPV 525 N+ TLFG+L F P + +GI P+I+ ++M IQ KM+ DK QA + ++P Sbjct: 473 ANVLTLFGLLNFNPP--ICIGILPVILGITMIIQQKMNTSTHSSQDQDKIQASFIKFLPY 530 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 VF+F SSFP GLIIYW SN I+I+QQ +I G + L Sbjct: 531 VFIFIFSSFPTGLIIYWICSNSITIIQQLIIKAYIGRKFNL 571 >gi|156972771|ref|YP_001443678.1| putative inner membrane protein translocase component YidC [Vibrio harveyi ATCC BAA-1116] gi|166977424|sp|A7N0X9|OXAA_VIBHB RecName: Full=Inner membrane protein oxaA gi|156524365|gb|ABU69451.1| hypothetical protein VIBHAR_00436 [Vibrio harveyi ATCC BAA-1116] Length = 540 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 148/572 (25%), Positives = 256/572 (44%), Gaps = 46/572 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + ++ + + Q S+A L Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQW----QVAKNPAPQAVEQAQSSSTLPAPSFADELDPV 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Q + + + + L SI+ G +L Y ++ S+ P V L + + Sbjct: 56 PGQQQASAKTITVTTDVLTLSIDTVGGDVVHADLNKYSAELDSSDPFVLLKDTKG--HQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I+L ++N +S T + + F AN I + +T Sbjct: 114 IAQSGLVGPQG-IDLSSTNRPHYKVSADSFTLADGQDELRVPMTFT-ANGIEYIKTYVFK 171 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y + V NNS + F + ++ + T G D + Sbjct: 172 RGSYALNVEYDVVNNSGNNATFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDVRYKKYS 231 Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S N + W + Y+A+ +IP E + + + + Sbjct: 232 FEDMQDRNLSINLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMP 288 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G L+ G K + ++++D+GW +FIAKP+ L+++ Sbjct: 289 NKTIATGDQAKFEATLWVGPKLQNEMAAV-----AENLDLVVDYGWLWFIAKPLHSLLAF 343 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 344 IQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMS 402 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 403 QEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY 462 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 IL-------------------PLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFF 503 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 504 LFFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 535 >gi|59710610|ref|YP_203386.1| putative inner membrane protein translocase component YidC [Vibrio fischeri ES114] gi|59478711|gb|AAW84498.1| cytoplasmic insertase into membrane protein, Sec system [Vibrio fischeri ES114] Length = 541 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 143/575 (24%), Positives = 249/575 (43%), Gaps = 51/575 (8%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N +A+AL S ++ WQ + ++ ++ P + Sbjct: 1 MDTQRNILLLALALVSFLLFQQWQVETNPQQPATVSTVQQTQTDGDVPTS-----STANS 55 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + + + L ++ G + L Y ++ S + V L ++ + Sbjct: 56 DTPADSAQSDKLITITTDVLTLKVDTLGGDIIESVLNKYDAELGSKAKFVLL--KNDATH 113 Query: 119 AYFAELDYVSTAN------NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 +Y A+ + + T + L G+ + L + I + +T+ Sbjct: 114 SYVAQSGLIGPQGIDSNSGRAQFTAQKTDYVLAEGQ---NELRVPLTLV-KDGITYTKTL 169 Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLV 230 L + Y + TV N S + ++ + T G D Sbjct: 170 ILKRDSYAIDVDYTVDNQSSAPATVEMYTNLKQNLMDDGGSLTMPTYRGAAYSTEDTRYK 229 Query: 231 EQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + + D+E ++S + W G+ Y+AS +IP + D Sbjct: 230 KYSFDDMEDKNLSIDMTNGQGWAGMLQHYFASAWIPRNVNDAKLTSRVAGDYGY---IGV 286 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 +TI G+ T + L+ G K + P ++ +D+GW +FIA P+ L Sbjct: 287 RMPSVTIPAGQEATLSATLWTGPKLQKEMAA-----TAPYLDLTVDYGWLWFIASPLHKL 341 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S+ +V N+G+AI++ T V+ +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 342 LSFIQGIVVNWGLAIIVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGDD-RQ 400 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M++LYK +NPL GC PILLQ+P+F ++Y + S+E+RH PF+GWI DL+A D Sbjct: 401 RMSQEMMELYKKEKVNPLGGCLPILLQMPIFISLYWALMESVELRHTPFFGWITDLSAQD 460 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I P++M SMF+ KMSP D Q I+ +MPV+F Sbjct: 461 PYYIL-------------------PLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFT 501 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + + Sbjct: 502 VFFLWFPSGLVLYWLVSNIVTLIQQTLIYRALEKK 536 >gi|269958897|ref|YP_003328686.1| inner membrane protein translocase component YidC [Anaplasma centrale str. Israel] gi|269848728|gb|ACZ49372.1| inner membrane protein translocase component YidC [Anaplasma centrale str. Israel] Length = 572 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 189/578 (32%), Positives = 311/578 (53%), Gaps = 17/578 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ SV ++ W+ Y +E +R+ P VD + Sbjct: 1 MSEARNLVLAVVASVAVMVGWRFVYDKVLTKESPQQREVASESLIPEVVDVAE----YRP 56 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 RA A++ PRV L N +++ SI+LKGA DD++L+ Y + +S V L+SP T+ Sbjct: 57 RADAVNSVPRVGLGNSNVLASISLKGALVDDVSLKKYQVSTDKHSENVVLMSPEGTQEDS 116 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFERTISLDEHY 178 E ++ +++++P+ +T+W + L + N ++F SLD Y Sbjct: 117 IVEFGWIDPKHSVKVPDKSTLWEVEQNSAADGDGESHTTLRWDNGQGLVFRLKFSLDRAY 176 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +F + V N++ + + + GRI + + + EG I G + L E Y D++ Sbjct: 177 MFSVSQEVENSTGEDLHLAYYGRINKAHAPDGKSYWISHEGAIGSFG-RGLQEWTYKDLQ 235 Query: 239 KSSISNFHE----SNSWLGISDKYWASVFIPSKET-SFHSQFKYL-SDGHARYQAKFSAN 292 K + + W+G++DKYW + +PS + K++ D +Q FS + Sbjct: 236 KENSIRVAAHEVAGSHWIGLADKYWFAALVPSSGGGKLAFRAKHIPRDDVDHFQVDFSRS 295 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + G T LF GAKE + Y L IP F+ +D+G YFI KP+F L+ Y Sbjct: 296 YGLVPAGGKAEATTQLFIGAKELAVLDDYRSKLNIPLFDKAVDFGILYFITKPVFRLLQY 355 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F+ +VGNFG+AI++ T+ +KL+ FPLA K YVS +K +QP+I ++E +K ++ Sbjct: 356 FHKVVGNFGLAIIMLTISIKLVVFPLASKSYVSMFKLKKLQPEISRIKELYKTDDVRIG- 414 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 K + L++ H ++P++G PIL+QIPVFFA+YKV+ +++EMRHAP WI+DL++ D N Sbjct: 415 KEISSLFRKHGVSPVSGFLPILVQIPVFFALYKVLFVTIEMRHAPLCAWIQDLSSQDTAN 474 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-ILNWMPVVFVFAL 531 + LFG+L F P + +G+ PII+ ++M +Q K++ I+ ++P VFVF Sbjct: 475 LLNLFGLLQFDPP--VCIGVLPIILGVTMVLQQKLNQQDQAAHDPYGIMKFLPYVFVFIF 532 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 SSFPAGL++YW SNVI+I+QQ + + L++ Sbjct: 533 SSFPAGLVLYWICSNVITILQQLFVRRFIFDRRDLVNN 570 >gi|193063841|ref|ZP_03044928.1| inner membrane protein OxaA [Escherichia coli E22] gi|192930556|gb|EDV83163.1| inner membrane protein OxaA [Escherichia coli E22] Length = 548 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 142/589 (24%), Positives = 262/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 Y A+ + ++N+ + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVPVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|290511687|ref|ZP_06551055.1| preprotein translocase YidC subunit [Klebsiella sp. 1_1_55] gi|289775477|gb|EFD83477.1| preprotein translocase YidC subunit [Klebsiella sp. 1_1_55] Length = 548 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 148/588 (25%), Positives = 254/588 (43%), Gaps = 56/588 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN G + L Y + S P L + + Y Sbjct: 50 GVPASGQGKLITVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLL--ETTPQFVY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ N + + I L + + +F +T +L Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYSVDKEAFVLADGQDEIVIPLTYTDKAGNVFTKTFTLK 167 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIM--------RHKPQTATNTFGVQEGFIAVLGD 226 Y + +V N S + S G++ R +T G D Sbjct: 168 RGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTSD 227 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + K+ I + N N W+ + +Y+ + ++P + + F + G+ Sbjct: 228 TKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPQNNGTNN--FYTANLGNGIVA 285 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + + + PG++ + L+ G + P ++ +D+GW +FI++P+ Sbjct: 286 IGYKSQPVLVQPGQTDKLQSVLWVGPAIQDKMAAV-----APHLDLTVDYGWLWFISQPL 340 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 FKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+ Sbjct: 401 K-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLS 459 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A DP I PIIM +MF KMSP D Q I+ +MPV Sbjct: 460 AQDPYYIL-------------------PIIMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 500 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 501 IFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|254230607|ref|ZP_04923966.1| inner membrane protein OxaA [Vibrio sp. Ex25] gi|262392790|ref|YP_003284644.1| OxaI/YidC membrane insertion protein [Vibrio sp. Ex25] gi|151936867|gb|EDN55766.1| inner membrane protein OxaA [Vibrio sp. Ex25] gi|262336384|gb|ACY50179.1| OxaI/YidC membrane insertion protein [Vibrio sp. Ex25] Length = 540 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 151/572 (26%), Positives = 256/572 (44%), Gaps = 46/572 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + I L+++ +Q + V E E+ + S+A L Sbjct: 1 MDSQRN-ILLIGLALVSFLLFQQWQVAKNPEPQAVEQAQSSSTL----PAPSFADELDPV 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Q + + + + L SI+ G NL Y ++ S+ V L + + + Sbjct: 56 PGQQQASAKTITVTTDVLTLSIDTVGGDVVHANLNEYSAELDSSDSFVLL--KDDQGHQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I+L ++N +S T + + F N I + +T Sbjct: 114 IAQSGLVGPQG-IDLSSTNRPHYNVSADSFTMADGQDELRVPMTFTT-NGIEYTKTYIFK 171 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y + V NNS + F + ++ + T G D + Sbjct: 172 RGSYALNVEYDVVNNSGNNATFGMYAHLRQNLMDDGGSITMPTYRGGAYSTEDTRYKKYS 231 Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S N + W + Y+A+ +IP E + + + + Sbjct: 232 FDDMQDRNLSLNLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMP 288 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G L+ G K + P ++++D+GW +FIAKP+ ML+S+ Sbjct: 289 NKTIATGDQAKFEATLWVGPKLQDEMAEV-----APNLDLVVDYGWLWFIAKPLHMLLSF 343 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 344 IQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMS 402 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 403 QEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY 462 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 IL-------------------PLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFF 503 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 504 LFFPSGLVLYWLVSNIVTLIQQTLIYKGLEKK 535 >gi|170766557|ref|ZP_02901010.1| inner membrane protein OxaA [Escherichia albertii TW07627] gi|170123995|gb|EDS92926.1| inner membrane protein OxaA [Escherichia albertii TW07627] Length = 548 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 144/592 (24%), Positives = 261/592 (44%), Gaps = 64/592 (10%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVSTANNIELPNS--------NTVWNLISGKILTPTTPIKLVFKNANNILFER 170 Y A+ N + L G+ + + + +A F + Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLADGQ---NELQVPMTYTDAAGNTFTK 163 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIA 222 T L Y + V N + S G++ + T ++ F + G Sbjct: 164 TFVLKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSINLPPHLDTGSSNFALHTFRGAAY 223 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 224 STPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGN 281 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 + + + + PG++ + L+ G + + P ++ +D+GW +FI Sbjct: 282 GIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFI 336 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 ++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 337 SQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRER 396 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI Sbjct: 397 LGDDK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWI 455 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521 DL+A DP I PI+M ++MF KMSP D Q I+ Sbjct: 456 HDLSAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMT 496 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +MPV+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 497 FMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|206575787|ref|YP_002241308.1| inner membrane protein OxaA [Klebsiella pneumoniae 342] gi|254772998|sp|B5XZP5|OXAA_KLEP3 RecName: Full=Inner membrane protein oxaA gi|206564845|gb|ACI06621.1| inner membrane protein OxaA [Klebsiella pneumoniae 342] Length = 548 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 148/588 (25%), Positives = 254/588 (43%), Gaps = 56/588 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN G + L Y + S P L + + Y Sbjct: 50 GVPASGQGKLITVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLL--ETTPQFVY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ N + + I L + + +F +T +L Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYSVDKEAFVLADSQDEIVIPLTYTDKAGNVFTKTFTLK 167 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIM--------RHKPQTATNTFGVQEGFIAVLGD 226 Y + +V N S + S G++ R +T G D Sbjct: 168 RGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTSD 227 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + K+ I + N N W+ + +Y+ + ++P + + F + G+ Sbjct: 228 TKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPQNNGTNN--FYTANLGNGIVA 285 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + + + PG++ + L+ G + P ++ +D+GW +FI++P+ Sbjct: 286 IGYKSQPVLVQPGQTDKLQSVLWVGPAIQDKMAAV-----APHLDLTVDYGWLWFISQPL 340 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 FKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+ Sbjct: 401 K-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLS 459 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A DP I PIIM +MF KMSP D Q I+ +MPV Sbjct: 460 AQDPYYIL-------------------PIIMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 500 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 501 IFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|90413740|ref|ZP_01221728.1| putative inner membrane protein translocase component YidC [Photobacterium profundum 3TCK] gi|90325209|gb|EAS41706.1| putative inner membrane protein translocase component YidC [Photobacterium profundum 3TCK] Length = 538 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 146/574 (25%), Positives = 257/574 (44%), Gaps = 52/574 (9%) Query: 1 MERNWN--YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S ++ W P+ + E++ + P+ + Sbjct: 1 MDSQRNILLIALLFVSFLLFQQWNMD-NSPQPQGQGTEQQVNNSGDVPSHSGDGQPIP-- 57 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 Q + + + L S++ G + L Y ++ S P + L + Sbjct: 58 ---DQETTSKDVITINTDVLALSVDTLGGDVTEAKLLAYDNELDSADPFILL--KDEAGH 112 Query: 119 AYFAELDYVSTAN------NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 +Y A+ + +L + + L G+ + + + + I + +T Sbjct: 113 SYIAQSGLIGANGIDSANGRAQLAVTAKDFTLADGQ---DELRVPMTYV-KDGITYTKTF 168 Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLV 230 L + Y + T+ N S ++ ++ ++ T G + Sbjct: 169 VLKRNSYAVDVEYTIDNQSASAASVQMYAQLRQNLMDDGSSLTMPTYRGGAYSTDTTNYK 228 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + D++ S+ N +N W + Y+ S +IP E + + F S+G Sbjct: 229 KYSFDDMQDKSL-NMTTTNGWAAMLQHYFVSAWIPRSEEA-SNLFTRASNGQGY--IGVR 284 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 TI G T T+ L+ G K + +L + +D+GW +FIA P+ L+ Sbjct: 285 LPTTTIAAGTEQTITSTLWVGPKLQKEMEATAANLN-----LTVDYGWLWFIASPLHKLL 339 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 S+ ++VGN+GIAIM+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 340 SFIQSIVGNWGIAIMMLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERLGDD-RQR 398 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M++LYK +NPL GC PI+LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 399 MSQEMMELYKKEKVNPLGGCLPIVLQMPIFIALYWSLMESVELRHSPFFGWIHDLSAQDP 458 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I P++M +SMF+ KMSP D Q I+ +MPV+F F Sbjct: 459 YYIL-------------------PLLMGVSMFMIQKMSPTTVTDPMQQKIMTFMPVMFTF 499 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SNV++++QQ +I + + Sbjct: 500 FFLWFPSGLVLYWLVSNVVTLIQQTLIYRSLEKK 533 >gi|194431207|ref|ZP_03063500.1| inner membrane protein OxaA [Shigella dysenteriae 1012] gi|194420662|gb|EDX36738.1| inner membrane protein OxaA [Shigella dysenteriae 1012] Length = 548 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 142/589 (24%), Positives = 262/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 Y A+ + ++N+ + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMATV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|157156055|ref|YP_001465190.1| putative inner membrane protein translocase component YidC [Escherichia coli E24377A] gi|166975860|sp|A7ZTR1|OXAA_ECO24 RecName: Full=Inner membrane protein oxaA gi|157078085|gb|ABV17793.1| inner membrane protein OxaA [Escherichia coli E24377A] Length = 548 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 142/589 (24%), Positives = 263/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++++ Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSSQF 106 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 Y A+ + ++N+ + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|269965283|ref|ZP_06179404.1| inner membrane protein, 60 kDa [Vibrio alginolyticus 40B] gi|269830084|gb|EEZ84312.1| inner membrane protein, 60 kDa [Vibrio alginolyticus 40B] Length = 540 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 152/572 (26%), Positives = 256/572 (44%), Gaps = 46/572 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + I L+++ +Q + V E E+ + S+A L Sbjct: 1 MDSQRN-ILLIGLALVSFLLFQQWQVAKNPEPQAVEQAQSSSTL----PAPSFADELDPV 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Q + + + + L SI+ G NL Y ++ S+ V L + + Sbjct: 56 PGQQQASAKTITVTTDVLTLSIDTVGGDVVHANLNEYSAELDSSDSFVLL--KDAQGHQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I+L ++N +S T + + F AN I + +T Sbjct: 114 IAQSGLVGPQG-IDLSSTNRPHYNVSADSFTMADGQDELRVPMTFT-ANGIEYTKTYIFK 171 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y + V NNS + F + ++ + T G D + Sbjct: 172 RGSYALNVEYDVVNNSGNNATFGMYAHLRQNLMDDGGSITMPTYRGGAYSTEDTRYKKYS 231 Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S N + W + Y+A+ +IP E + + + + Sbjct: 232 FDDMQDRNLSLNLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMP 288 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G L+ G K + P ++++D+GW +FIAKP+ ML+S+ Sbjct: 289 NKTIATGDQAKFEATLWVGPKLQDEMAEV-----APNLDLVVDYGWLWFIAKPLHMLLSF 343 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 344 IQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMS 402 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 403 QEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY 462 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 IL-------------------PLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFF 503 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 504 LFFPSGLVLYWLVSNIVTLIQQTLIYKGLEKK 535 >gi|145301204|ref|YP_001144045.1| 60 kDa inner membrane protein [Aeromonas salmonicida subsp. salmonicida A449] gi|166975848|sp|A4STS5|OXAA_AERS4 RecName: Full=Inner membrane protein oxaA gi|142853976|gb|ABO92297.1| 60 kDa inner membrane protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 548 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 140/576 (24%), Positives = 249/576 (43%), Gaps = 47/576 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + QT + + + + Sbjct: 1 MESQRNLIL-IGLLFVSFLLWQQWESDKAPKP--APTTVAQTEHFVPEAGQTGDIPQVSE 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +A A + + + + L +++ +G L + L+ + V L S Y Sbjct: 58 QANANAARKLITVSSDVLKLTLDTQGGDIVSAELLAHKLEEGKDQSFVLLTSQ--PDRLY 115 Query: 121 FAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ V + T + L G+ + + + ++ ++F + Sbjct: 116 VAQSGLVGRDGPDSQAQGRPTYEAAQTSYQLADGQ---DQVVVPMTWTDSKGVVFTKEFV 172 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH---KPQTATNTFGVQEGFIAVLGDKSL 229 L Y + + N S + ++ G++ + + + Sbjct: 173 LKRGDYAIGVDYKIDNKSAEPVQVQFYGQLKQTVTTPKDQEGHAMVASAYRGGAFSSEES 232 Query: 230 VEQKYS-DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 +KY+ D K + N W+ + Y+ S + P+ + + +S + + G + Sbjct: 233 RYKKYTFDEMKDADLNKTTKGGWVAMLQHYFVSAWAPNADDT-NSFYSRVIPGKDQAIIG 291 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + A + + G+ T+ L+ G K + ++ +D+GW +FIA+P+ Sbjct: 292 YKAPLVDVAAGQQAEVTSKLWVGPKLQDQMAKVAN-----HLDLTVDYGWLWFIAQPLHW 346 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L++ F V N+G+AI++ T+ V+ + FPL K QY S A M+ +QPK+ L+E+F Sbjct: 347 LLTVFQGFVHNWGVAIIMLTLLVRGIMFPLTKAQYTSMAKMRMLQPKLAALKERFSDD-R 405 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PIL+Q+P+F A+Y + S+E+RHAPF WI DL+ Sbjct: 406 QKMSQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWALMESVELRHAPFALWITDLSVK 465 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP + PI+M SM+ KMSP D Q ++ +MP++F Sbjct: 466 DPFFVL-------------------PILMGASMWYLQKMSPTTITDPMQQKVMQFMPIIF 506 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F FPAGL +YW SNVISI QQ +I + + Sbjct: 507 TFMFLWFPAGLTLYWLVSNVISITQQTIIYRQLEKK 542 >gi|15804299|ref|NP_290338.1| putative inner membrane protein translocase component YidC [Escherichia coli O157:H7 EDL933] gi|15833894|ref|NP_312667.1| inner membrane protein translocase component YidC [Escherichia coli O157:H7 str. Sakai] gi|26250446|ref|NP_756486.1| putative inner membrane protein translocase component YidC [Escherichia coli CFT073] gi|74314020|ref|YP_312439.1| putative inner membrane protein translocase component YidC [Shigella sonnei Ss046] gi|91213230|ref|YP_543216.1| putative inner membrane protein translocase component YidC [Escherichia coli UTI89] gi|110644048|ref|YP_671778.1| putative inner membrane protein translocase component YidC [Escherichia coli 536] gi|117625980|ref|YP_859303.1| putative inner membrane protein translocase component YidC [Escherichia coli APEC O1] gi|157163186|ref|YP_001460504.1| putative inner membrane protein translocase component YidC [Escherichia coli HS] gi|168748575|ref|ZP_02773597.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4113] gi|168753598|ref|ZP_02778605.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4401] gi|168759895|ref|ZP_02784902.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4501] gi|168766196|ref|ZP_02791203.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4486] gi|168772256|ref|ZP_02797263.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4196] gi|168779931|ref|ZP_02804938.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4076] gi|168786539|ref|ZP_02811546.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC869] gi|168798744|ref|ZP_02823751.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC508] gi|170022258|ref|YP_001727212.1| putative inner membrane protein translocase component YidC [Escherichia coli ATCC 8739] gi|170680368|ref|YP_001746035.1| putative inner membrane protein translocase component YidC [Escherichia coli SMS-3-5] gi|191170354|ref|ZP_03031907.1| inner membrane protein OxaA [Escherichia coli F11] gi|195936328|ref|ZP_03081710.1| putative inner membrane protein translocase component YidC [Escherichia coli O157:H7 str. EC4024] gi|208806756|ref|ZP_03249093.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4206] gi|208813372|ref|ZP_03254701.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4045] gi|208818916|ref|ZP_03259236.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4042] gi|209400160|ref|YP_002273233.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4115] gi|209921182|ref|YP_002295266.1| putative inner membrane protein translocase component YidC [Escherichia coli SE11] gi|215489045|ref|YP_002331476.1| putative inner membrane protein translocase component YidC [Escherichia coli O127:H6 str. E2348/69] gi|217325489|ref|ZP_03441573.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. TW14588] gi|218556272|ref|YP_002389186.1| putative inner membrane protein translocase component YidC [Escherichia coli IAI1] gi|218560781|ref|YP_002393694.1| inner membrane protein translocase component YidC [Escherichia coli S88] gi|218691994|ref|YP_002400206.1| putative inner membrane protein translocase component YidC [Escherichia coli ED1a] gi|218697428|ref|YP_002405095.1| putative inner membrane protein translocase component YidC [Escherichia coli 55989] gi|218702555|ref|YP_002410184.1| putative inner membrane protein translocase component YidC [Escherichia coli IAI39] gi|218707352|ref|YP_002414871.1| putative inner membrane protein translocase component YidC [Escherichia coli UMN026] gi|227883928|ref|ZP_04001733.1| Oxa1 family cytochrome oxidase biogenesis protein [Escherichia coli 83972] gi|237703507|ref|ZP_04533988.1| inner-membrane protein [Escherichia sp. 3_2_53FAA] gi|254795708|ref|YP_003080545.1| putative inner membrane protein translocase component YidC [Escherichia coli O157:H7 str. TW14359] gi|256021276|ref|ZP_05435141.1| putative inner membrane protein translocase component YidC [Shigella sp. D9] gi|260846510|ref|YP_003224288.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O103:H2 str. 12009] gi|260857884|ref|YP_003231775.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O26:H11 str. 11368] gi|261225859|ref|ZP_05940140.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O157:H7 str. FRIK2000] gi|261258904|ref|ZP_05951437.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O157:H7 str. FRIK966] gi|291285124|ref|YP_003501942.1| Preprotein translocase subunit YidC [Escherichia coli O55:H7 str. CB9615] gi|293407345|ref|ZP_06651267.1| inner membrane protein translocase component YidC [Escherichia coli FVEC1412] gi|293413160|ref|ZP_06655826.1| conserved hypothetical protein [Escherichia coli B354] gi|298383086|ref|ZP_06992681.1| inner membrane protein oxaA [Escherichia coli FVEC1302] gi|300815047|ref|ZP_07095272.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 107-1] gi|300824309|ref|ZP_07104425.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 119-7] gi|300896034|ref|ZP_07114595.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 198-1] gi|300903018|ref|ZP_07120960.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 84-1] gi|300925529|ref|ZP_07141404.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 182-1] gi|300940891|ref|ZP_07155418.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 21-1] gi|300983658|ref|ZP_07176699.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 200-1] gi|300984535|ref|ZP_07177025.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 45-1] gi|301020905|ref|ZP_07184960.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 69-1] gi|301047525|ref|ZP_07194601.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 185-1] gi|301305948|ref|ZP_07212030.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 124-1] gi|301325003|ref|ZP_07218553.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 78-1] gi|306815941|ref|ZP_07450079.1| putative inner membrane protein translocase component YidC [Escherichia coli NC101] gi|307313226|ref|ZP_07592851.1| membrane protein insertase [Escherichia coli W] gi|312967885|ref|ZP_07782097.1| inner membrane protein oxaA [Escherichia coli 2362-75] gi|331649533|ref|ZP_08350619.1| inner membrane protein OxaA [Escherichia coli M605] gi|331660049|ref|ZP_08360987.1| inner membrane protein OxaA [Escherichia coli TA206] gi|331665356|ref|ZP_08366257.1| inner membrane protein OxaA [Escherichia coli TA143] gi|331670550|ref|ZP_08371389.1| inner membrane protein OxaA [Escherichia coli TA271] gi|331675197|ref|ZP_08375950.1| inner membrane protein OxaA [Escherichia coli TA280] gi|331679804|ref|ZP_08380474.1| inner membrane protein OxaA [Escherichia coli H591] gi|331685430|ref|ZP_08386016.1| inner membrane protein OxaA [Escherichia coli H299] gi|332282505|ref|ZP_08394918.1| inner-membrane protein [Shigella sp. D9] gi|54038803|sp|P65625|OXAA_ECO57 RecName: Full=Inner membrane protein oxaA gi|54041692|sp|P65624|OXAA_ECOL6 RecName: Full=Inner membrane protein oxaA gi|122421835|sp|Q1R4M9|OXAA_ECOUT RecName: Full=Inner membrane protein oxaA gi|122957862|sp|Q0TB02|OXAA_ECOL5 RecName: Full=Inner membrane protein oxaA gi|123615901|sp|Q3YWA8|OXAA_SHISS RecName: Full=Inner membrane protein oxaA gi|166975861|sp|A8A6G7|OXAA_ECOHS RecName: Full=Inner membrane protein oxaA gi|166975862|sp|A1AHN9|OXAA_ECOK1 RecName: Full=Inner membrane protein oxaA gi|189036350|sp|B1IX33|OXAA_ECOLC RecName: Full=Inner membrane protein oxaA gi|254772773|sp|B7UMH2|OXAA_ECO27 RecName: Full=Inner membrane protein oxaA gi|254772774|sp|B7MGC7|OXAA_ECO45 RecName: Full=Inner membrane protein oxaA gi|254772775|sp|B7L849|OXAA_ECO55 RecName: Full=Inner membrane protein oxaA gi|254772776|sp|B5YXA9|OXAA_ECO5E RecName: Full=Inner membrane protein oxaA gi|254772777|sp|B7NR08|OXAA_ECO7I RecName: Full=Inner membrane protein oxaA gi|254772778|sp|B7N210|OXAA_ECO81 RecName: Full=Inner membrane protein oxaA gi|254772779|sp|B7M558|OXAA_ECO8A RecName: Full=Inner membrane protein oxaA gi|254772781|sp|B7NF23|OXAA_ECOLU RecName: Full=Inner membrane protein oxaA gi|254772782|sp|B6I3T8|OXAA_ECOSE RecName: Full=Inner membrane protein oxaA gi|254772783|sp|B1LL32|OXAA_ECOSM RecName: Full=Inner membrane protein oxaA gi|12518544|gb|AAG58902.1|AE005601_8 60 KD inner-membrane protein [Escherichia coli O157:H7 str. EDL933] gi|26110876|gb|AAN83060.1|AE016769_175 60 kDa inner-membrane protein [Escherichia coli CFT073] gi|13364115|dbj|BAB38063.1| 60 KD inner-membrane protein [Escherichia coli O157:H7 str. Sakai] gi|73857497|gb|AAZ90204.1| 60 kDa inner-membrane protein [Shigella sonnei Ss046] gi|91074804|gb|ABE09685.1| 60 KD inner-membrane protein [Escherichia coli UTI89] gi|110345640|gb|ABG71877.1| 60 kDa inner-membrane protein [Escherichia coli 536] gi|115515104|gb|ABJ03179.1| inner membrane protein translocase component YidC [Escherichia coli APEC O1] gi|157068866|gb|ABV08121.1| inner membrane protein OxaA [Escherichia coli HS] gi|169757186|gb|ACA79885.1| 60 kDa inner membrane insertion protein [Escherichia coli ATCC 8739] gi|170518086|gb|ACB16264.1| inner membrane protein OxaA [Escherichia coli SMS-3-5] gi|187771700|gb|EDU35544.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4196] gi|188016887|gb|EDU55009.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4113] gi|189002654|gb|EDU71640.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4076] gi|189359277|gb|EDU77696.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4401] gi|189364371|gb|EDU82790.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4486] gi|189369628|gb|EDU88044.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4501] gi|189373378|gb|EDU91794.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC869] gi|189378759|gb|EDU97175.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC508] gi|190909162|gb|EDV68748.1| inner membrane protein OxaA [Escherichia coli F11] gi|208726557|gb|EDZ76158.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4206] gi|208734649|gb|EDZ83336.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4045] gi|208739039|gb|EDZ86721.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4042] gi|209161560|gb|ACI38993.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4115] gi|209754078|gb|ACI75346.1| GTP-binding protein in thiophene and furan oxidation [Escherichia coli] gi|209754080|gb|ACI75347.1| GTP-binding protein in thiophene and furan oxidation [Escherichia coli] gi|209754082|gb|ACI75348.1| GTP-binding protein in thiophene and furan oxidation [Escherichia coli] gi|209754084|gb|ACI75349.1| GTP-binding protein in thiophene and furan oxidation [Escherichia coli] gi|209754086|gb|ACI75350.1| GTP-binding protein in thiophene and furan oxidation [Escherichia coli] gi|209914441|dbj|BAG79515.1| conserved hypothetical protein [Escherichia coli SE11] gi|215267117|emb|CAS11564.1| cytoplasmic insertase into membrane protein, Sec-system [Escherichia coli O127:H6 str. E2348/69] gi|217321710|gb|EEC30134.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. TW14588] gi|218354160|emb|CAV00764.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli 55989] gi|218363041|emb|CAR00680.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli IAI1] gi|218367550|emb|CAR05335.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli S88] gi|218372541|emb|CAR20416.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli IAI39] gi|218429558|emb|CAR10381.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli ED1a] gi|218434449|emb|CAR15377.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli UMN026] gi|222035420|emb|CAP78165.1| Inner membrane protein oxaA [Escherichia coli LF82] gi|226902771|gb|EEH89030.1| inner-membrane protein [Escherichia sp. 3_2_53FAA] gi|227839206|gb|EEJ49672.1| Oxa1 family cytochrome oxidase biogenesis protein [Escherichia coli 83972] gi|254595108|gb|ACT74469.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O157:H7 str. TW14359] gi|257756533|dbj|BAI28035.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O26:H11 str. 11368] gi|257761657|dbj|BAI33154.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O103:H2 str. 12009] gi|281180760|dbj|BAI57090.1| conserved hypothetical protein [Escherichia coli SE15] gi|284923789|emb|CBG36887.1| inner membrane protein [Escherichia coli 042] gi|290764997|gb|ADD58958.1| Preprotein translocase subunit YidC [Escherichia coli O55:H7 str. CB9615] gi|291425636|gb|EFE98672.1| inner membrane protein translocase component YidC [Escherichia coli FVEC1412] gi|291468293|gb|EFF10788.1| conserved hypothetical protein [Escherichia coli B354] gi|294493492|gb|ADE92248.1| inner membrane protein OxaA [Escherichia coli IHE3034] gi|298276922|gb|EFI18440.1| inner membrane protein oxaA [Escherichia coli FVEC1302] gi|300300585|gb|EFJ56970.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 185-1] gi|300306881|gb|EFJ61401.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 200-1] gi|300360094|gb|EFJ75964.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 198-1] gi|300398372|gb|EFJ81910.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 69-1] gi|300404924|gb|EFJ88462.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 84-1] gi|300408368|gb|EFJ91906.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 45-1] gi|300418369|gb|EFK01680.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 182-1] gi|300454372|gb|EFK17865.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 21-1] gi|300523196|gb|EFK44265.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 119-7] gi|300531939|gb|EFK53001.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 107-1] gi|300838799|gb|EFK66559.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 124-1] gi|300848097|gb|EFK75857.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 78-1] gi|305850337|gb|EFM50794.1| putative inner membrane protein translocase component YidC [Escherichia coli NC101] gi|306906909|gb|EFN37418.1| membrane protein insertase [Escherichia coli W] gi|307555846|gb|ADN48621.1| 60 kDa inner-membrane protein [Escherichia coli ABU 83972] gi|307628782|gb|ADN73086.1| putative inner membrane protein translocase component YidC [Escherichia coli UM146] gi|312287446|gb|EFR15354.1| inner membrane protein oxaA [Escherichia coli 2362-75] gi|312948273|gb|ADR29100.1| putative inner membrane protein translocase component YidC [Escherichia coli O83:H1 str. NRG 857C] gi|315063011|gb|ADT77338.1| cytoplasmic insertase into membrane protein, sec system [Escherichia coli W] gi|315254606|gb|EFU34574.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 85-1] gi|315285489|gb|EFU44934.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 110-3] gi|315296905|gb|EFU56193.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 16-3] gi|320201267|gb|EFW75848.1| Inner membrane protein translocase component YidC, long form [Escherichia coli EC4100B] gi|320639431|gb|EFX09046.1| membrane protein insertase [Escherichia coli O157:H7 str. G5101] gi|320644874|gb|EFX13910.1| membrane protein insertase [Escherichia coli O157:H- str. 493-89] gi|320650138|gb|EFX18634.1| membrane protein insertase [Escherichia coli O157:H- str. H 2687] gi|320655486|gb|EFX23421.1| membrane protein insertase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661112|gb|EFX28548.1| membrane protein insertase [Escherichia coli O55:H7 str. USDA 5905] gi|320666238|gb|EFX33244.1| membrane protein insertase [Escherichia coli O157:H7 str. LSU-61] gi|323155382|gb|EFZ41565.1| inner membrane protein oxaA [Escherichia coli EPECa14] gi|323380927|gb|ADX53195.1| membrane protein insertase, YidC/Oxa1 family domain containing [Escherichia coli KO11] gi|323939231|gb|EGB35444.1| membrane protein insertase [Escherichia coli E482] gi|323944178|gb|EGB40258.1| membrane protein insertase [Escherichia coli H120] gi|323949950|gb|EGB45834.1| membrane protein insertase [Escherichia coli H252] gi|323954999|gb|EGB50777.1| membrane protein insertase [Escherichia coli H263] gi|323975227|gb|EGB70331.1| membrane protein insertase [Escherichia coli TW10509] gi|324008042|gb|EGB77261.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 57-2] gi|324012733|gb|EGB81952.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 60-1] gi|324018426|gb|EGB87645.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 117-3] gi|324115942|gb|EGC09868.1| membrane protein insertase [Escherichia coli E1167] gi|330908022|gb|EGH36541.1| inner membrane protein translocase component YidC, long form [Escherichia coli AA86] gi|331042031|gb|EGI14175.1| inner membrane protein OxaA [Escherichia coli M605] gi|331053264|gb|EGI25297.1| inner membrane protein OxaA [Escherichia coli TA206] gi|331057866|gb|EGI29852.1| inner membrane protein OxaA [Escherichia coli TA143] gi|331062612|gb|EGI34532.1| inner membrane protein OxaA [Escherichia coli TA271] gi|331067642|gb|EGI39044.1| inner membrane protein OxaA [Escherichia coli TA280] gi|331072976|gb|EGI44301.1| inner membrane protein OxaA [Escherichia coli H591] gi|331077801|gb|EGI49013.1| inner membrane protein OxaA [Escherichia coli H299] gi|332104857|gb|EGJ08203.1| inner-membrane protein [Shigella sp. D9] Length = 548 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 142/589 (24%), Positives = 262/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 Y A+ + ++N+ + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|82546030|ref|YP_409977.1| inner membrane protein translocase component YidC [Shigella boydii Sb227] gi|187730301|ref|YP_001882461.1| putative inner membrane protein translocase component YidC [Shigella boydii CDC 3083-94] gi|123558282|sp|Q31UV9|OXAA_SHIBS RecName: Full=Inner membrane protein oxaA gi|254778164|sp|B2TUS3|OXAA_SHIB3 RecName: Full=Inner membrane protein oxaA gi|81247441|gb|ABB68149.1| 60 kDa inner-membrane protein [Shigella boydii Sb227] gi|187427293|gb|ACD06567.1| inner membrane protein OxaA [Shigella boydii CDC 3083-94] Length = 548 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 142/589 (24%), Positives = 262/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 Y A+ + ++N+ + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKTQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|324111603|gb|EGC05584.1| membrane protein insertase [Escherichia fergusonii B253] Length = 548 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 144/589 (24%), Positives = 260/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAESQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|288932889|ref|YP_003436948.1| membrane protein insertase, YidC/Oxa1 family domain containing [Klebsiella variicola At-22] gi|288887618|gb|ADC55936.1| membrane protein insertase, YidC/Oxa1 family domain containing [Klebsiella variicola At-22] Length = 548 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 148/588 (25%), Positives = 254/588 (43%), Gaps = 56/588 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN G + L Y + S P L + + Y Sbjct: 50 GVPASGQGKLITVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLL--ETTPQFVY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ N + + I L + + +F +T +L Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYNVDKEAFVLADGQDEIVIPLTYTDKAGNVFTKTFTLK 167 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIM--------RHKPQTATNTFGVQEGFIAVLGD 226 Y + +V N S + S G++ R +T G D Sbjct: 168 RGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTSD 227 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + K+ I + N N W+ + +Y+ + ++P + + F + G+ Sbjct: 228 TKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPQNNGTNN--FYTANLGNGIVA 285 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + + + PG++ + L+ G + P ++ +D+GW +FI++P+ Sbjct: 286 IGYKSQPVLVQPGQTDKLQSVLWVGPAIQDKMAAV-----APHLDLTVDYGWLWFISQPL 340 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 FKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+ Sbjct: 401 K-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLS 459 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A DP I PIIM +MF KMSP D Q I+ +MPV Sbjct: 460 AQDPYYIL-------------------PIIMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 500 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 501 IFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|30065013|ref|NP_839184.1| putative inner membrane protein translocase component YidC [Shigella flexneri 2a str. 2457T] gi|30043274|gb|AAP18995.1| 60 KD inner-membrane protein [Shigella flexneri 2a str. 2457T] Length = 548 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 141/589 (23%), Positives = 261/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 Y A+ + ++N+ + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++M KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMLFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|194435576|ref|ZP_03067679.1| inner membrane protein OxaA [Escherichia coli 101-1] gi|253775660|ref|YP_003038491.1| inner membrane protein translocase component YidC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163657|ref|YP_003046765.1| putative inner membrane protein translocase component YidC [Escherichia coli B str. REL606] gi|300932337|ref|ZP_07147605.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 187-1] gi|194425119|gb|EDX41103.1| inner membrane protein OxaA [Escherichia coli 101-1] gi|242379245|emb|CAQ34050.1| inner-membrane protein insertion factor, subunit of SecD-SecF-YajC-YidC Secretion Complex and Sec Protein Secretion Complex [Escherichia coli BL21(DE3)] gi|253326704|gb|ACT31306.1| 60 kDa inner membrane insertion protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975558|gb|ACT41229.1| inner membrane protein translocase component YidC [Escherichia coli B str. REL606] gi|253979714|gb|ACT45384.1| inner membrane protein translocase component YidC [Escherichia coli BL21(DE3)] gi|300459923|gb|EFK23416.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 187-1] gi|323959771|gb|EGB55421.1| membrane protein insertase [Escherichia coli H489] gi|323971183|gb|EGB66429.1| membrane protein insertase [Escherichia coli TA007] Length = 548 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 144/589 (24%), Positives = 260/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPMYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|170718320|ref|YP_001785332.1| inner membrane protein translocase component YidC [Haemophilus somnus 2336] gi|254772997|sp|B0URU3|OXAA_HAES2 RecName: Full=Inner membrane protein oxaA gi|168826449|gb|ACA31820.1| 60 kDa inner membrane insertion protein [Haemophilus somnus 2336] Length = 541 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 156/583 (26%), Positives = 276/583 (47%), Gaps = 53/583 (9%) Query: 1 ME--RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ R+ + + +S +I WQ Y P+ E + ++V+++ Sbjct: 1 MDSKRSLLFMALLFISFLIYQQWQVDYNTPKPEVTEQAQV--------SEVNSTALTATS 52 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D + + L+N +N G L Y ++ S++P V L +N Sbjct: 53 DIANDTQAKGRVITLENDVFRLKVNTLGGDVIGSELLNYDAELHSSAPFVLL--QNNADK 110 Query: 119 AYFAELDYVST------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ V A V+ L G+ + L+F+ + +++ + Sbjct: 111 VYIAQSGLVGKNGIDSRAGRANYQVEGDVFKLAEGQ---QELKVPLIFE-KDGVIYRKVF 166 Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGDKSLV 230 L Y ++ +TN S I P ++ +++ + G + + Sbjct: 167 VLKPGSYALEVNFEITNQSPKPIELVPYAQLTHTLVESSGSMAMPTYTGGAYSSSETNYK 226 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + D+EK+ + + H W+ + Y+ S +IP+++ + ++ + + + Sbjct: 227 KYSFEDMEKADL-DIHTKAGWVALLQHYFVSAWIPNQDAN-NTLYTLTNTKKHLGSIGYR 284 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I I G + T L+ G K + ++ +D+GW +FIAKP+F L+ Sbjct: 285 SAPIVIENGATETIHTQLWTGPKLQDQMADVAN-----HLDLTVDYGWAWFIAKPLFKLL 339 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + +LV N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F + Q Sbjct: 340 TLIQSLVQNWGLAIIGVTLVVKAVLYPLTKAQYTSMAKMRMLQPKLQEMRERFGED-RQR 398 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GW++DL+A DP Sbjct: 399 MSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFMEAVELRHAPFFGWVQDLSAQDP 458 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PI+M SMF+ KMSP P AD Q ++ +MP++F+ Sbjct: 459 YFIL-------------------PILMGASMFLLQKMSPTPVADPMQQKVMTFMPLIFMV 499 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 FPAGL++YW SN+I+I QQ +I + + GL R++ Sbjct: 500 FFLFFPAGLVLYWLASNLITIAQQWLIYR-GLEKKGLHTRVKK 541 >gi|113460279|ref|YP_718337.1| putative inner membrane protein translocase component YidC [Haemophilus somnus 129PT] gi|123131891|sp|Q0I0Z1|OXAA_HAES1 RecName: Full=Inner membrane protein oxaA gi|112822322|gb|ABI24411.1| protein translocase subunit yidC [Haemophilus somnus 129PT] Length = 541 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 157/583 (26%), Positives = 276/583 (47%), Gaps = 53/583 (9%) Query: 1 ME--RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ R+ + + +S +I WQ Y P+ E + ++V+++ Sbjct: 1 MDSKRSLLFMALLFISFLIYQQWQVDYNTPKPEMTEQAQV--------SEVNSTALTATS 52 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D + + L+N +N G L Y ++ S++P V L +N Sbjct: 53 DIANDTQAKGRVITLENDVFRLKVNTLGGDVIGSELLNYDAELHSSAPFVLL--QNNADK 110 Query: 119 AYFAELDYVST------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ V A V+ L G+ + LVF+ + +++ + Sbjct: 111 VYIAQSGLVGKNGIDSRAGRANYQVEGDVFKLAEGQ---QELKVPLVFE-KDGVIYRKVF 166 Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGDKSLV 230 L Y ++ +TN S I P ++ +++ + G + + Sbjct: 167 VLKPGSYALEVNFEITNQSPKPIEVVPYAQLTHTLVESSGSMAMPTYTGGAYSSSETNYK 226 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + D+EK+ + + H W+ + Y+ S +IP+++ + ++ + + + Sbjct: 227 KYSFEDMEKADL-DIHTKAGWVALLQHYFVSAWIPNQDAN-NTLYTLTNTKKHLGSIGYR 284 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I I G + T L+ G K + ++ +D+GW +FIAKP+F L+ Sbjct: 285 SAPIVIENGATETIHTQLWTGPKLQDQMADVAN-----HLDLTVDYGWAWFIAKPLFKLL 339 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + +LV N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F + Q Sbjct: 340 TLIQSLVQNWGLAIIGVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERFGED-RQR 398 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GW++DL+A DP Sbjct: 399 MSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFMEAVELRHAPFFGWVQDLSAQDP 458 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PI+M SMF+ KMSP P AD Q ++ +MP++F+ Sbjct: 459 YFIL-------------------PILMGASMFLLQKMSPTPVADPMQQKVMTFMPLIFMV 499 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 FPAGL++YW SN+I+I QQ +I + + GL R++ Sbjct: 500 FFLFFPAGLVLYWLASNLITIAQQWLIYR-GLEKKGLHTRVKK 541 >gi|197286946|ref|YP_002152818.1| inner membrane protein translocase component YidC [Proteus mirabilis HI4320] gi|227354814|ref|ZP_03839231.1| Oxa1 family cytochrome oxidase biogenesis protein [Proteus mirabilis ATCC 29906] gi|194684433|emb|CAR46145.1| inner membrane protein [Proteus mirabilis HI4320] gi|227165132|gb|EEI49963.1| Oxa1 family cytochrome oxidase biogenesis protein [Proteus mirabilis ATCC 29906] Length = 546 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 150/584 (25%), Positives = 273/584 (46%), Gaps = 50/584 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + + Q P+ + + Sbjct: 1 MDSQRNL-LFIALLFVSFLIWQQWEGDKVSQNTTTTTQVSQQADMPSSDSLAVTGNSNE- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + +K L IN +G D+ +L Y +++S +P L + + Y Sbjct: 59 ------QAKLITVKTDVLDLRINTQGGTIDEADLLAYPAELNSKTPFRLL--ETTPQFLY 110 Query: 121 FAELDYVSTANNIELP---NSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 A+ + + S T I G+ + + F N + F +T L + Sbjct: 111 QAQSGLIGPDGPDQKSRPVYSATQQEFILGEN-QDELRVPMTFVNEEGVKFVKTFILKKG 169 Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFIAVLGDKSLVE 231 Y I V N + + + G++ + T ++ F + A Sbjct: 170 QYDIGIEYKVENPTDKTLTMNFYGQLKQSVKLPEHRDTGSSNFALHTYRGAAYSSDETNY 229 Query: 232 QKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS DIE ++S +N W+ + +Y+A+ +IP+K++ ++ + D + + Sbjct: 230 KKYSFGDIEDKNLS-ITTNNGWIAMLQQYFATAWIPAKDSQNNNFYSITLDNKSIALIGY 288 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + IT+ P + T+ L+ G + + P ++ +D+GW +FI++P+F L Sbjct: 289 KSAPITVAPNSTQDITSTLWVGPEIQSEMSAI-----APHLDLSVDYGWLWFISQPLFKL 343 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ LRE+ Q Sbjct: 344 LKFLHSFIGNWGFSIIMITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAALRERIGDDK-Q 402 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI+DL+A D Sbjct: 403 RMSQEMMALYKQEKVNPLGGCLPLIIQMPIFLALYYMLMGSVELRHAPFILWIQDLSAQD 462 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I P++M ++MFI K+SP D Q I+ +MPVVF Sbjct: 463 PYYIL-------------------PLLMGVTMFIIQKLSPTAVTDPMQQKIMTFMPVVFT 503 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 504 VFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSRDKK 546 >gi|301154699|emb|CBW14162.1| cytoplasmic insertase into membrane protein, Sec system [Haemophilus parainfluenzae T3T1] Length = 542 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 146/574 (25%), Positives = 267/574 (46%), Gaps = 50/574 (8%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V + +S ++ WQ P ++ + + ++ Sbjct: 1 MDSRRSLLVLALLFISFLVYQQWQLDKNPPVQQQTTE------QTTTASSDVPASSSSSA 54 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + A + + + L+N ++ G L Y ++ S P V L ++ Sbjct: 55 EVVADSQTKGHIITLENDVFRLKVDTLGGDVISSELLKYDAELGSKEPFVLL--KDTNEH 112 Query: 119 AYFAELDYVST------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ + A + S + L G+ + L F+ + + + + Sbjct: 113 VYIAQSGLIGKNGIDTKAGRAQYQVSGDNFKLAEGQ---NELSVPLTFE-KDGVTYRKIF 168 Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLV 230 L + Y + + N S I P G++ +++ N G + + Sbjct: 169 VLKRDSYDVGVNFEIVNQSGSAIEVEPYGQLKHTLVESSGNVAMPTYTGGAYSSSETNYK 228 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + +SD++ ++S W+ + Y+ S +IP+++ + + + + Sbjct: 229 KYSFSDMKDKNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYSITDSKNNVASIGYR 286 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 +++ G + T T+ L+ G K + ++ +D+GW +FIAKP+F L+ Sbjct: 287 GPVVSVPAGATETITSSLWTGPKLQNKMAEVAN-----HLDLTVDYGWAWFIAKPLFWLL 341 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++ ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q Sbjct: 342 TFIQSIVSNWGVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKMQEMRERFGDD-RQR 400 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M++LYK +NPL GC P++LQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 401 MSQEMMKLYKEEKVNPLGGCLPLILQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDP 460 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PI+M SMF+ KMSP P AD Q ++N+MP++F+F Sbjct: 461 YYIL-------------------PILMGGSMFLLQKMSPTPVADPMQQKVMNFMPLIFMF 501 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW SN+I+IVQQ +I + + Sbjct: 502 FFLWFPAGLVLYWLVSNLITIVQQQMIYRGLEKK 535 >gi|260870436|ref|YP_003236838.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O111:H- str. 11128] gi|257766792|dbj|BAI38287.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O111:H- str. 11128] Length = 548 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 142/589 (24%), Positives = 262/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 Y A+ + ++N+ + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QHISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|237747151|ref|ZP_04577631.1| preprotein translocase YidC subunit [Oxalobacter formigenes HOxBLS] gi|229378502|gb|EEO28593.1| preprotein translocase YidC subunit [Oxalobacter formigenes HOxBLS] Length = 557 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 165/582 (28%), Positives = 264/582 (45%), Gaps = 54/582 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY-------PRIEEMNN------ERKNIQTVKQPN 47 M+ + + L++ + W N+ VY + E + T P Sbjct: 1 MDTKKRTTLLLILAISLFMLWDNWQVYRGGTSLIFQHEAKKTDSNVALPEVPVDTAVVPG 60 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + V + + V + L IN +G F +L L Y +V + Sbjct: 61 EAGTPATPVAEVMKEAPKKQAELVTVTTDVLKVQINSEGGVFQNLELLKYPDNVDPEKDM 120 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIKLVFKNA-N 164 + L S Y A+ PN T + + G+ + +KLV + Sbjct: 121 I--LFESVPPRIYLAQTGLTGG----VYPNHATRFTVHPGERSLADGKDEVKLVMDAERD 174 Query: 165 NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFI 221 + +T + Y+ + VTN + + I S +++R +P+ + G Sbjct: 175 GVRLTKTYTFKRGSYVVDVDQKVTNLTNEPIDASLYLQLLRDSSRPEGQSRFISTFTGPA 234 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHES--NSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + K+ DI ++ ++ N W+ I Y+ S FIP + + K + Sbjct: 235 VYTQADKFQKLKFDDITETKGADHATKADNGWIAIVQHYFVSAFIPKDKVERENYTKKV- 293 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G Y TI P S + + L+AG +E + P E++ D+GW Sbjct: 294 -GEDLYAIGTVIPLGTIAPKASASNDSRLYAGPQESIILEQ-----TAPGLELVKDYGWL 347 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 IAKP+F LM++ + VGN+G I+L T +KL+F PL+ Y S A MK P+I EL Sbjct: 348 TIIAKPIFWLMTHIHKEVGNWGWTIILLTCLIKLVFLPLSAASYKSMARMKQFTPRIQEL 407 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 R+++K Q + + ++ LYK INPL GC P+++QIPVF ++Y V+ S+E+R+AP+ Sbjct: 408 RDRYKDDK-QRMNQELMALYKAEKINPLGGCLPVVVQIPVFISLYWVLLASVEIRNAPWL 466 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 GWI++LAA DP I PIIM+ SMFIQ KMSPPP D QA + Sbjct: 467 GWIQNLAAPDPFYIL-------------------PIIMAGSMFIQQKMSPPPPDPLQAKL 507 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + ++P+VF FP+GL++YW +N++SI QQ I K +G Sbjct: 508 MMFLPIVFSITFFFFPSGLVLYWVVNNLLSIAQQYWINKRYG 549 >gi|323965767|gb|EGB61218.1| membrane protein insertase [Escherichia coli M863] Length = 548 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 142/589 (24%), Positives = 261/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ + +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDTNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 Y A+ + ++N+ + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQAGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|322835122|ref|YP_004215149.1| membrane protein insertase, YidC/Oxa1 family domain containing [Rahnella sp. Y9602] gi|321170323|gb|ADW76022.1| membrane protein insertase, YidC/Oxa1 family domain containing [Rahnella sp. Y9602] Length = 544 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 144/587 (24%), Positives = 253/587 (43%), Gaps = 58/587 (9%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ + +S +I AWQ + + + N NQ Sbjct: 1 MDSQRNLFLIALLFVSFMIWQAWQTDHAPQPANQTTQQTANTANGDATNQAVPDS----- 55 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + L +IN +G + L+ Y + S+ P L + N Sbjct: 56 -------GQGKLITVNSDVLSLTINTRGGDIEQALLKAYPTTLGSDQPFQLLETTPNF-- 106 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTIS 173 Y A+ N S T I + + AN ++ +T Sbjct: 107 LYQAQSGLTGKNGPDNPANGERPLFKASSDTFTMAEGQSELRIPMTYTAANGAIYTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227 + Y + + N + + + G++ + T +N F + A Sbjct: 167 IKRGSYAVNVEYNINNTTAAPLELTMFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSSS 226 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 QKY+ +KS N W+ + +Y+A+ +IPS + + + Sbjct: 227 DDKYQKYA-FDKSEALNVTTQGGWVAMLQQYFATAWIPSAKDTNTFFTTTN---NGISTI 282 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F T+ PG + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 283 GFKGTPFTVAPGAQQQVASILWVGPEIQDKMAAI-----APHLDLTVDYGWLWFISQPLF 337 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + VGN+G +I++ T V+ + +PL + QY S A M+ +QPK+ +RE+ Sbjct: 338 KLLKFIQGFVGNWGFSIIVITFIVRGIMYPLTRAQYTSMAKMRMLQPKLAAMRERIGDDK 397 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+A Sbjct: 398 -QRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLSGSIELRHAPFILWIHDLSA 456 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I P++M ++MF KMSP D Q I+ +MPV+ Sbjct: 457 QDPYYIL-------------------PVLMGITMFFIQKMSPTTVTDPMQQKIMTFMPVI 497 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 498 FTVFFLWFPSGLVVYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 543 >gi|58617041|ref|YP_196240.1| putative inner membrane protein translocase component YidC [Ehrlichia ruminantium str. Gardel] gi|58416653|emb|CAI27766.1| 60 kD inner-membrane protein [Ehrlichia ruminantium str. Gardel] Length = 575 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 211/581 (36%), Positives = 336/581 (57%), Gaps = 25/581 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N A+ LSV+I+ W+ Y E+ + ++ + + + Sbjct: 1 MLEIRNLVFAVVLSVLIMMGWRLVY-----EKFFTVQHVVEDEDSSSMIPEIDNVLTYRS 55 Query: 61 RAQALSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R + + + RV+L N + GSI+LKGAQ DDL + YH+ ++S + LLSP NT+ Sbjct: 56 RNEIIDSTQNLRVKLSNKEINGSISLKGAQLDDLVFKNYHITPDNSSDGIILLSPENTEG 115 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YF E ++ + I +PN + W +L+P + L + N ++F+ ++LD++Y Sbjct: 116 VYFIEFGWIDPQHKIVVPNQLSTWTS-DKSVLSPNNTVTLTWNNQQGVIFQIKVTLDDYY 174 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +FKI + NN+ + + P GRI R + T + + EG + G +L E Y +I Sbjct: 175 MFKIEQIIINNTDNVVNLIPYGRINRARHTTEKSYWISHEGAVGSFG-YTLKEWTYKNII 233 Query: 239 KSSISNF----HESNSWLGISDKYWASVFIP---SKETSFHSQFKYLS-DGHARYQAKFS 290 K + N W+GI+DKYW + IP K++ K+ + R+Q FS Sbjct: 234 KERNIKISQQNTDDNQWVGIADKYWFTALIPNILQKKSKLSFHVKHGKYNNEDRFQVDFS 293 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + + P K+ ++T++LFAGAKE + Y+KDL I F+ +D+G YFI KP+F+L+ Sbjct: 294 HDSYSAYPNKTASSTSYLFAGAKELKLLDKYKKDLNISLFDKAVDFGILYFITKPVFLLL 353 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 YFY+L+GNFG+AI+L T+ +KL+ FPL+ K YVS +K +QP+I +++E +K + Sbjct: 354 EYFYDLIGNFGLAILLLTIVIKLIMFPLSYKSYVSMFKLKYLQPEILKIKELYKNDNTK- 412 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + K + L+K ++++P++G PIL+QIPVFFA+YKV+ +++EMRHAPF+ W+KDL+ D Sbjct: 413 MSKEVSLLFKKNDVSPMSGFIPILIQIPVFFALYKVLFVTIEMRHAPFYLWVKDLSNFDT 472 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPADKGQAMILNWMPV 525 N+ TLFG+L F P + +GI P+I+ ++M IQ KM+ DK QA + ++P Sbjct: 473 ANVLTLFGLLNFNPP--ICIGILPVILGITMIIQQKMNTSTHSSQDQDKIQASFIKFLPY 530 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 VF+F SSFP GLIIYW SN I+I+QQ +I G + L Sbjct: 531 VFIFIFSSFPTGLIIYWICSNSITIIQQLIIKAYIGRKFNL 571 >gi|254363130|ref|ZP_04979180.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica PHL213] gi|261491963|ref|ZP_05988540.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496234|ref|ZP_05992639.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153095021|gb|EDN75576.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica PHL213] gi|261308065|gb|EEY09363.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312430|gb|EEY13556.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 541 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 148/572 (25%), Positives = 270/572 (47%), Gaps = 50/572 (8%) Query: 3 RNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 N + +S++I WQ + P I+ + QT + + S A I Sbjct: 2 NNRGLLLMGLFLVSILIFTQWQQDF-DPEIQAQKQAQVAAQTQQAGDLPSASNANNPI-- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A +++ + +++ L +I+ G +L ++ ++ SN+P L + Y Sbjct: 59 -ADSITQGKTITVESDVLRLTIDTLGGDVIGSDLLKHNAELHSNTPFKLL--QQDGDKIY 115 Query: 121 FAELDYVS------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 A+ V A + + + L G+ + L F+ +++ +T +L Sbjct: 116 VAQSGLVGKNGIDTNAGRPQYAVTADSFKLAEGQ---NEISVPLTFE-KEGVVYTKTFTL 171 Query: 175 DE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQ 232 Y + + NN+ I P G++ +++ N T G + + + Sbjct: 172 KRGSYDVGVNFNIKNNTAQAIEVQPYGQLKHSIVESSGNLTMPTYTGGAYSSSETNYKKY 231 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D+EK+++S W+ + Y+ S ++P+++ + + + Sbjct: 232 SFQDMEKANLS-VDTKAGWIAVLQHYFVSAWVPNQDADNSLYSRT---NNGVATIGYRGP 287 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI P + L+ G+K+ + + ++ +D+GW +FIAKP+F L++ Sbjct: 288 LTTIAPNSEANLNSKLWTGSKDQKEM-----GESANHLDLTVDYGWAWFIAKPLFWLLTA 342 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +V N+G+AI+ T+ VK + +PL K QY S A M+ +QP+I E+RE+F Q + Sbjct: 343 IQKIVSNWGLAIIGVTIVVKTILYPLTKAQYTSMAKMRMLQPRITEMRERFGDD-RQRMS 401 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LY+ +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 402 QEMMKLYREEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY 461 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP P AD Q ++ +MPV+F Sbjct: 462 IL-------------------PLLMGGSMFLLQKMSPTPVADPVQQKVMTFMPVIFTVFF 502 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+I+I QQ +I + + Sbjct: 503 LWFPSGLVLYWLTSNLITIAQQWLIYRNLEKK 534 >gi|190150778|ref|YP_001969303.1| inner membrane protein OxaA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250854|ref|ZP_07337047.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253770|ref|ZP_07339905.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248474|ref|ZP_07530494.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|254772740|sp|B3H2D6|OXAA_ACTP7 RecName: Full=Inner membrane protein oxaA gi|189915909|gb|ACE62161.1| inner membrane protein OxaA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302647354|gb|EFL77575.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650269|gb|EFL80432.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306855042|gb|EFM87225.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 542 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 151/572 (26%), Positives = 272/572 (47%), Gaps = 46/572 (8%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M N + V + +S +I WQ + E ++ Q D A+ Sbjct: 1 MNSNRSLLVMGLLLVSFLIFTQWQQDFN---PEIQAQKQAQQQAQVASQSGDVPAASNAN 57 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A+ + V L++ L +I+ G +L ++ +++S +P L + + T Sbjct: 58 TVIAENATQGKTVTLESDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATT-- 115 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISL 174 Y A+ V N I+ + + + + + F+ + +L+ +T L Sbjct: 116 -YVAQSGLVG-KNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFE-KDGVLYTKTFVL 172 Query: 175 DE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQ 232 Y + V N + + P G+I +++ + T G + + + Sbjct: 173 KRGSYDVAVNFNVKNQTAATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKKY 232 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D+EK+++ + + W+ + Y+ S ++P+++ + + + Sbjct: 233 SFQDMEKANL-DINTKAGWVALLQHYFVSAWVPNQDAENTIYSRT---NNGIATIGYRGP 288 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI P T T+ L+ G K+ + +L ++ +D+GW +FIAKP+F L+++ Sbjct: 289 VTTIAPNSEATITSQLWTGPKDQKEMEATAANL-----DLTVDYGWAWFIAKPLFALLTF 343 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+RE+F Q + Sbjct: 344 IQSIVTNWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGDD-RQRMS 402 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 403 QEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY 462 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP P D Q ++ +MPV+F Sbjct: 463 IL-------------------PLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFF 503 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+I+IVQQ +I + + Sbjct: 504 LWFPSGLVLYWLTSNIITIVQQWLIYRNLEKK 535 >gi|194428126|ref|ZP_03060670.1| inner membrane protein OxaA [Escherichia coli B171] gi|194413884|gb|EDX30162.1| inner membrane protein OxaA [Escherichia coli B171] Length = 548 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 142/589 (24%), Positives = 261/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKKLNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 Y A+ + ++N+ + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|218551236|ref|YP_002385028.1| inner membrane protein translocase component YidC [Escherichia fergusonii ATCC 35469] gi|254772785|sp|B7LK48|OXAA_ESCF3 RecName: Full=Inner membrane protein oxaA gi|218358778|emb|CAQ91436.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia fergusonii ATCC 35469] Length = 548 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 144/589 (24%), Positives = 260/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFI 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPYLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|323493773|ref|ZP_08098891.1| membrane protein insertase [Vibrio brasiliensis LMG 20546] gi|323311907|gb|EGA65053.1| membrane protein insertase [Vibrio brasiliensis LMG 20546] Length = 539 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 151/574 (26%), Positives = 259/574 (45%), Gaps = 51/574 (8%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N +A+AL S ++ WQ N + ++ + + + A + Sbjct: 1 MDSQRNILLIALALVSFLLFQQWQV--------AKNPTPQPVEQAQSSSTLPAPSFADEL 52 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D + + + + L SI+ G + +L Y ++ S P V L + + Sbjct: 53 DPAPAQQASAKTITVTTDVLTLSIDTVGGDVINADLNQYSNELDSADPFVLL--KNEPGH 110 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTIS 173 + A+ V I+L ++N +S I + F AN + + +T Sbjct: 111 QFIAQSGLVGPQG-IDLSSTNRPQYAVSADSFVMADGQDELRIPMTF-AANGLEYTKTFI 168 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVE 231 + Y + V N S + F + ++ + T G D + Sbjct: 169 VKRGSYAVDVEYDVVNKSGNNATFGMYAHLRQNLLDAGGSITMPTYRGGAYSTEDTRYKK 228 Query: 232 QKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + D++ ++S N + W + Y+AS +IP E + + + + Sbjct: 229 YSFEDMQDRNLSLNLVDGQGWAAMIQHYFASAWIPRDEPGTNLYTRVIGNLGD---IGVR 285 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 TI G S L+ G K + P ++++D+GW +FIAKP+ L+ Sbjct: 286 MPNKTIADGDSANLKATLWVGPKLQDQMAEV-----APNLDLVVDYGWLWFIAKPLHTLL 340 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 S+ + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 341 SFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQR 399 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 400 MSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWITDLSAQDP 459 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 460 YYIL-------------------PLLMGASMFMIQKMSPTTVTDPMQQKIMTFMPVMFTF 500 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SNV++++QQ++I K + Sbjct: 501 FFLFFPSGLVLYWLVSNVVTLIQQSLIYKALEKK 534 >gi|315292865|gb|EFU52217.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 153-1] Length = 548 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 144/589 (24%), Positives = 260/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APYLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|58578983|ref|YP_197195.1| putative inner membrane protein translocase component YidC [Ehrlichia ruminantium str. Welgevonden] gi|58417609|emb|CAI26813.1| 60 kD inner-membrane protein [Ehrlichia ruminantium str. Welgevonden] Length = 575 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 212/581 (36%), Positives = 335/581 (57%), Gaps = 25/581 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N A+ LSV+I+ W+ Y E+ + ++ + + + Sbjct: 1 MLEIRNLVFAVVLSVLIMMGWRLVY-----EKFFTVQHVVEDEDSSSMIPEIDNVLTYRS 55 Query: 61 RAQALSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R + + + RV+L N + GSI LKGAQ DDL + YH+ S+S + LLSP NT+ Sbjct: 56 RNEIIDSTQNLRVKLSNKEINGSILLKGAQLDDLVFKNYHITPDSSSDGIILLSPENTEG 115 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YF E ++ + I +PN + W +L+P + L + N ++F+ ++LD++Y Sbjct: 116 VYFIEFGWIDPQHKIVVPNQLSTWTS-DKSVLSPNNTVTLTWDNQQGVIFQIKVTLDDYY 174 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +FKI + NN+ + + P GRI R + T + + EG + G +L E Y +I Sbjct: 175 MFKIEQIIINNTDNVVNLIPYGRINRARHTTEKSYWISHEGAVGSFG-YTLKEWTYKNII 233 Query: 239 KSSISNF----HESNSWLGISDKYWASVFIP---SKETSFHSQFKYLS-DGHARYQAKFS 290 K + N W+GI+DKYW + IP K++ K+ + R+Q FS Sbjct: 234 KERNIKISQQNTDDNQWVGIADKYWFTALIPNILQKKSKLSFHVKHGKYNNEDRFQVDFS 293 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + + P K+ ++T++LFAGAKE + Y+KDL I F+ +D+G YFI KP+F+L+ Sbjct: 294 HDSYSAYPNKTASSTSYLFAGAKELKLLDKYKKDLNISLFDKAVDFGILYFITKPVFLLL 353 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 YFY+L+GNFG+AI+L T+ +KL+ FPL+ K YVS +K +QP+I +++E +K + Sbjct: 354 EYFYDLIGNFGLAILLLTIVIKLIMFPLSYKSYVSMFKLKYLQPEILKIKELYKNDNTK- 412 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + K + L+K ++++P++G PIL+QIPVFFA+YKV+ +++EMRHAPF+ W+KDL+ D Sbjct: 413 MSKEVSLLFKKNDVSPMSGFIPILIQIPVFFALYKVLFVTIEMRHAPFYLWVKDLSNFDT 472 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPADKGQAMILNWMPV 525 N+ TLFG+L F P + +GI P+I+ ++M IQ KM+ DK QA + ++P Sbjct: 473 ANVLTLFGLLNFNPP--ICIGILPVILGITMIIQQKMNTSTHSSQDQDKIQASFIKFLPY 530 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 VF+F SSFP GLIIYW SN I+I+QQ +I G + L Sbjct: 531 VFIFIFSSFPTGLIIYWICSNSITIIQQLIIKAYIGRKFNL 571 >gi|86147168|ref|ZP_01065484.1| putative inner membrane protein translocase component YidC [Vibrio sp. MED222] gi|218708091|ref|YP_002415712.1| putative inner membrane protein translocase component YidC [Vibrio splendidus LGP32] gi|254778171|sp|B7VGH7|OXAA_VIBSL RecName: Full=Inner membrane protein oxaA gi|85835052|gb|EAQ53194.1| putative inner membrane protein translocase component YidC [Vibrio sp. MED222] gi|218321110|emb|CAV17060.1| Inner membrane protein oxaA [Vibrio splendidus LGP32] Length = 539 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 151/573 (26%), Positives = 258/573 (45%), Gaps = 49/573 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI-QTVKQPNQVDNSYAAVLID 59 M+ N + IAL+++ +Q + V E+ T+ P+ D+ +D Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWNVAQNPAPQAVEQAQSGSTLPAPSYADD------LD 53 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 ++ + + + L SI+ G NL Y + S V L + + Sbjct: 54 PAPGQVASAKTITVTTDVLTLSIDTVGGDVVTANLNDYSAEFDSEDTFVLL--KNEPGHQ 111 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISL 174 + A+ V I+L ++N +S T I + ++ AN + + +T L Sbjct: 112 FIAQSGLVGPQG-IDLSSTNRPSYTVSADSFTLAEGQDELRIPMTYQ-ANGLDYTKTFVL 169 Query: 175 DE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQ 232 Y + V NNS + F + ++ + T G D + Sbjct: 170 KRGSYAIDVEYDVVNNSGNNATFGMYAHLRQNVMDDGGSLTMPTYRGGAYSTEDTRYKKY 229 Query: 233 KYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D++ ++S N W + Y+AS +IP E + + + + Sbjct: 230 SFDDMQDRNLSLNLANGQGWAAMIQHYFASAWIPRDEAGSNLYTRVIGNLGD---IGVRM 286 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 TI G + L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 287 PNKTIATGDEASFKATLWVGPKLQDQMAAV-----APNLDLVVDYGWLWFIAKPLHTLLS 341 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + +V N+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 342 FIQGIVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGDD-RQRM 400 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + M++LYK +NPL GC PILLQ+P+F ++Y + S+E+RH+PF+GWI DL+A DP Sbjct: 401 SQEMMELYKKEKVNPLGGCLPILLQMPIFISLYWALMESVELRHSPFFGWITDLSAQDPY 460 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 461 YIL-------------------PLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFF 501 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + + Sbjct: 502 FLFFPSGLVLYWLVSNIVTLIQQTLIYRALEKK 534 >gi|160877622|ref|YP_001556938.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS195] gi|189036361|sp|A9KX20|OXAA_SHEB9 RecName: Full=Inner membrane protein oxaA gi|160863144|gb|ABX51678.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS195] gi|315269821|gb|ADT96674.1| membrane protein insertase, YidC/Oxa1 family domain containing [Shewanella baltica OS678] Length = 541 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 149/568 (26%), Positives = 248/568 (43%), Gaps = 47/568 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + + D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSLVANAANSHSADVPEADTGVP- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + S + +K L IN G L + ++ + P V L Y Sbjct: 59 -AAVTATSKLITVKTDQLDVQINPIGGDIVFAALVSHKMEQDKDQPFVLL--EQTKDFTY 115 Query: 121 FAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + + T + L G+ T + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFSTAATEYTLAEGQ---DTLEVPLTYVADNGVTYTKVFV 172 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVE 231 + + + N S ++ G+I + KP ++ G D + Sbjct: 173 FHRGKFNVDVDYKINNTSAAPLQVQMYGQIKQTIKPSESSMVMPTYRGGAFSTQDVRYEK 232 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 K+ D+ KS++ N W + Y+ S +IP S + G A F Sbjct: 233 YKFDDMAKSNL-NQATLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRG 289 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I PG + ++ + G K+ + L +++D+G+ +++A P+ L+ Sbjct: 290 AVYDIAPGATQEISSQFYVGPKDQKALSAISDTLN-----LVVDYGFLWWLAVPIHWLLM 344 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++ + VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + Sbjct: 345 FYQSFVGNWGLAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLTDLKERFGDD-RQKM 403 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM++LYK +NP+ GC PI+LQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 404 GQAMMELYKKEKVNPMGGCLPIILQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPY 463 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVF 529 I P++M +SMF+ KM P P D Q ++ WMPV+F Sbjct: 464 YIL-------------------PLLMGVSMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTV 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 505 FFLWFPAGLVLYWLVGNIVAITQQKIIY 532 >gi|325577779|ref|ZP_08148054.1| YidC/Oxa1 family membrane protein insertase [Haemophilus parainfluenzae ATCC 33392] gi|325160524|gb|EGC72650.1| YidC/Oxa1 family membrane protein insertase [Haemophilus parainfluenzae ATCC 33392] Length = 542 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 144/572 (25%), Positives = 264/572 (46%), Gaps = 46/572 (8%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V + +S ++ WQ P ++ + + ++ Sbjct: 1 MDSRRSLLVLALLFISFLVYQQWQLDKNPPVQQQTTE------QTTTASSDVPASSSSSA 54 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + A + + + L+N ++ G L Y ++ S P V L ++ Sbjct: 55 EVVADSQTKGHIITLENDVFRLKVDTLGGDVISSELLKYDAELGSKEPFVLL--KDTNEH 112 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFERTISL 174 Y A+ + N I+ + + + L + + + + + L Sbjct: 113 VYIAQSGLIG-KNGIDTKAGRAQYQVTGDNFKLAEGQNELSVPLTLE-KDGVTYRKIFVL 170 Query: 175 D-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQ 232 + Y + + N S I P G++ +++ N G + + + Sbjct: 171 KRDSYDVGVNFEIVNQSGSAIEVEPYGQLKHTLVESSGNVAMPTYTGGAYSSSETNYKKY 230 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 +SD++ ++S W+ + Y+ S +IP+++ + + + + Sbjct: 231 SFSDMKDKNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYSITDSKNNVASIGYRGP 288 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 ++I G + T T+ L+ G K + ++ +D+GW +FIAKP+F L+++ Sbjct: 289 VVSIPAGATETITSSLWTGPKLQNKMAEVAN-----HLDLTVDYGWAWFIAKPLFWLLTF 343 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + Sbjct: 344 IQSIVSNWGVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKMQEMRERFGDD-RQRMS 402 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC P++LQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 403 QEMMKLYKEEKVNPLGGCLPLILQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY 462 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I PI+M SMF+ KMSP P AD Q ++N+MP++F+F Sbjct: 463 IL-------------------PILMGGSMFLLQKMSPTPVADPMQQKVMNFMPLIFMFFF 503 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW SN+I+IVQQ +I + + Sbjct: 504 LWFPAGLVLYWLVSNLITIVQQQMIYRGLEKK 535 >gi|320539850|ref|ZP_08039509.1| putative cytoplasmic insertase into membrane protein, Sec system [Serratia symbiotica str. Tucson] gi|320030036|gb|EFW12056.1| putative cytoplasmic insertase into membrane protein, Sec system [Serratia symbiotica str. Tucson] Length = 545 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 141/584 (24%), Positives = 250/584 (42%), Gaps = 55/584 (9%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S +I AWQ + T + Q N+ A Sbjct: 4 QRNLLLIALLFVSFMIWQAWQ------------ADNAPQPTAQTTQQTSNATADDAARQD 51 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + + L +IN +G + L Y + S+ P L + Y Sbjct: 52 GPVSAQGKLITVNTDVLSLTINTRGGDIEQAKLLAYPETLGSSLPFQLL--ETTPSFVYQ 109 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLDE 176 A+ N + T I L F + + ++ +T L Sbjct: 110 AQSGLTGKNGPDNPANGERPLYQAAQDSYTLPEGQDELRIPLSFTSKDGTIYTKTFVLKR 169 Query: 177 H-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLV 230 + Y + + N S + + G++ + T +N F + A Sbjct: 170 NHYAVSVDYYIDNKSTTPLELTLFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSSSEDK 229 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 QKY+ +K N W+ + +Y+A+ ++P+ + S F + G F Sbjct: 230 YQKYA-FDKDEKLNVTTQGGWIAMLQQYFATAWVPATQGSNT--FYTANPGDNLSTIGFK 286 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + + + P L+ G + + ++ +D+GW +FI++P+F L+ Sbjct: 287 STPVVVQPSTQQQLNATLWVGPELQDQMAQL-----AAHLDLTVDYGWLWFISQPLFKLL 341 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 342 KFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKMQAMRERIGDDK-QR 400 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP Sbjct: 401 MSQEMMALYKSEKVNPLGGCLPLIVQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQDP 460 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 461 YYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTV 501 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 502 FFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSRDKKK 544 >gi|284007059|emb|CBA72334.1| inner membrane protein [Arsenophonus nasoniae] Length = 545 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 149/591 (25%), Positives = 273/591 (46%), Gaps = 69/591 (11%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + + +S +I W++ P K Q VKQ + + A L ++ Sbjct: 4 QRNLLFIAWLFVSFLIWQTWESDKTQP--------IKTDQIVKQMDMPSHDDQANLGHEQ 55 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A + +K L IN +G D +L Y ++ S+ P L + + Y Sbjct: 56 A------KFITVKTDVLELRINTRGGDIDGADLLLYPKELHSSDPFRLLETSKDF--IYQ 107 Query: 122 AELDYVSTANNIELPNSN-----------TVWNLISGKILTPTTPIKLVFKNANNILFER 170 A+ + + + P N T + L G+ + L F + +++++ Sbjct: 108 AQSGLIG-QDGPDNPGYNNGLRPLYLSTATSYALQDGQ---DELRVPLTFTGKDGVVYQK 163 Query: 171 TISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVL 224 L Y + + N S + + G++ + + T +N F + A Sbjct: 164 VYVLKRGKYNISVEYNIDNKSAKPLSLAFFGQLKQTVELPKERDTGSNNFALHTYRGAAY 223 Query: 225 GDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + +SDI +++ N + W+ + +Y+A+ +IP + F + Sbjct: 224 SSDETNYKKYSFSDITDNNL-NVNSKGGWIAMLQQYFATAWIP--GYQNQNTFYTIDLDK 280 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 A + ++ IT+ T+ L+ G + + P ++ +D+GW +FI Sbjct: 281 AIAIIGYKSSPITVAANSKENYTSTLWVGPELQAEMAAV-----APHLDLTVDYGWLWFI 335 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 ++P+F L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ ++E+ Sbjct: 336 SQPLFKLLKFIHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMKER 395 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q + + M+ LYK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF GWI Sbjct: 396 IGDDK-QRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFIGWI 454 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521 +DL+A DP I P++M L+M+I KMSP D Q I+ Sbjct: 455 QDLSAQDPYYIL-------------------PLLMGLTMYIIQKMSPTTVTDPMQQKIMT 495 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 +MPV+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 496 YMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQIIYR-GLEKRGLHSRDKK 545 >gi|82779235|ref|YP_405584.1| putative inner membrane protein translocase component YidC [Shigella dysenteriae Sd197] gi|123561063|sp|Q329B2|OXAA_SHIDS RecName: Full=Inner membrane protein oxaA gi|81243383|gb|ABB64093.1| 60 KD inner-membrane protein [Shigella dysenteriae Sd197] Length = 548 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 141/589 (23%), Positives = 261/589 (44%), Gaps = 58/589 (9%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y +++S P L ++ + Sbjct: 49 DQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQF 106 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 Y A+ + ++N+ + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y + V N + S G++ + T ++ F + G Sbjct: 167 LKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ + P + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWSPHNDGTNN--FYTANLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL Sbjct: 400 DK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 547 >gi|46143583|ref|ZP_00134946.2| COG0706: Preprotein translocase subunit YidC [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 542 Score = 468 bits (1205), Expect = e-129, Method: Composition-based stats. Identities = 151/572 (26%), Positives = 272/572 (47%), Gaps = 46/572 (8%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M N + V + +S +I WQ + E ++ Q D A+ Sbjct: 1 MNSNRSLLVMGLLLVSFLIFTQWQQDFN---PEIQAQKQAQQQAQVASQSGDVLAASNAN 57 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A+ + V L++ L +I+ G +L ++ +++S +P L + + T Sbjct: 58 TVIAENATQGKTVTLESDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATT-- 115 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISL 174 Y A+ V N I+ + + + + + F+ + +L+ +T L Sbjct: 116 -YVAQSGLVG-KNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFE-KDGVLYTKTFVL 172 Query: 175 DE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQ 232 Y + V N + + P G+I +++ + T G + + + Sbjct: 173 KRGSYDVAVNFNVKNQTAATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKKY 232 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D+EK+++ + + W+ + Y+ S ++P+++ + + + Sbjct: 233 SFQDMEKANL-DINTKAGWVALLQHYFVSAWVPNQDAENTIYSRT---NNGIATIGYRGP 288 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI P T T+ L+ G K+ + +L ++ +D+GW +FIAKP+F L+++ Sbjct: 289 VTTIAPNSEATITSQLWTGPKDQKEMEATAANL-----DLTVDYGWAWFIAKPLFALLTF 343 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+RE+F Q + Sbjct: 344 IQSIVTNWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGDD-RQRMS 402 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 403 QEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY 462 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP P D Q ++ +MPV+F Sbjct: 463 IL-------------------PLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFF 503 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+I+IVQQ +I + + Sbjct: 504 LWFPSGLVLYWLTSNIITIVQQWLIYRNLEKK 535 >gi|165976859|ref|YP_001652452.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|254772741|sp|B0BR23|OXAA_ACTPJ RecName: Full=Inner membrane protein oxaA gi|165876960|gb|ABY70008.1| 60 kD inner-membrane protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 542 Score = 468 bits (1205), Expect = e-129, Method: Composition-based stats. Identities = 151/572 (26%), Positives = 272/572 (47%), Gaps = 46/572 (8%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M N + V + +S +I WQ + E ++ Q D A+ Sbjct: 1 MNSNRSLLVMGLLLVSFLIFTQWQQDFN---PEIQAQKQAQQQAQVASQSGDVPAASNAN 57 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A+ + V L++ L +I+ G +L ++ +++S +P L + + T Sbjct: 58 TVIAENATQGKTVTLESDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATT-- 115 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISL 174 Y A+ V N I+ + + + + + F+ + +L+ +T L Sbjct: 116 -YVAQSGLVG-KNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFE-KDGVLYTKTFVL 172 Query: 175 DE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQ 232 Y + V N + + P G+I +++ + T G + + + Sbjct: 173 KRGSYDVAVNFNVKNQTAATVEVQPYGQIKYTLLESSGSLTMPTYTGGAYSSAETNYKKY 232 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D+EK+++ + + W+ + Y+ S ++P+++ + + + Sbjct: 233 SFQDMEKANL-DINTKAGWVALLQHYFVSAWVPNQDAENTIYSRT---NNGIATIGYRGP 288 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI P T T+ L+ G K+ + +L ++ +D+GW +FIAKP+F L+++ Sbjct: 289 VTTIAPNSEATITSQLWTGPKDQKEMEATAANL-----DLTVDYGWAWFIAKPLFALLTF 343 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+RE+F Q + Sbjct: 344 IQSIVTNWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGDD-RQRMS 402 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 403 QEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY 462 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP P D Q ++ +MPV+F Sbjct: 463 IL-------------------PLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFF 503 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+I+IVQQ +I + + Sbjct: 504 LWFPSGLVLYWLTSNIITIVQQWLIYRNLEKK 535 >gi|323496920|ref|ZP_08101948.1| membrane protein insertase [Vibrio sinaloensis DSM 21326] gi|323317994|gb|EGA70977.1| membrane protein insertase [Vibrio sinaloensis DSM 21326] Length = 539 Score = 468 bits (1204), Expect = e-129, Method: Composition-based stats. Identities = 151/574 (26%), Positives = 259/574 (45%), Gaps = 51/574 (8%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N +A+AL S ++ WQ N + ++ + + + A + Sbjct: 1 MDSQRNILLIALALVSFLLFQQWQV--------AKNPTPQPVEQAQSSSTLPAPSFADEL 52 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D + + + + +L SI+ G +L Y ++ S V L + + Sbjct: 53 DPAPAQQASAKTITVTTDALTLSIDTVGGDVVHADLNEYSAELDSADSFVLL--KNEPGH 110 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTIS 173 + A+ V I+L ++N +S T + + F +AN + + +T Sbjct: 111 QFIAQSGLVGPQG-IDLSSTNRPAYAVSADSFTLADGQDELRVPMTF-SANGLEYTKTFI 168 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVE 231 L Y + V NNS + F + ++ + T G + + Sbjct: 169 LKRGSYAIDVEYNVVNNSGNNATFGMYAHLRQNLLDAGGSITMPTYRGGAYSTEETRYKK 228 Query: 232 QKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + D++ ++S N + W + Y+AS +IP E + + + + Sbjct: 229 YSFEDMQDRNLSINLPDGQGWAAMIQHYFASAWIPRNEPGTNLYTRVIGNLGD---IGVR 285 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 TI G S + L+ G K + P ++++D+GW +FIAKP+ L+ Sbjct: 286 MPNKTIASGDSAQMSATLWVGPKLQDQMAEV-----APNLDLVVDYGWLWFIAKPLHSLL 340 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 S LV N+GIAI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 341 SLIQGLVSNWGIAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQR 399 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 400 MSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDP 459 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 460 YYIL-------------------PLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTF 500 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 501 FFLFFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 534 >gi|329114454|ref|ZP_08243216.1| Inner membrane protein OxaA [Acetobacter pomorum DM001] gi|326696530|gb|EGE48209.1| Inner membrane protein OxaA [Acetobacter pomorum DM001] Length = 594 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 181/589 (30%), Positives = 323/589 (54%), Gaps = 29/589 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ +A LS ++++ + F+ P+ + + ++ + V P + AA + Sbjct: 12 MDS-KRLILATLLSALVLFGYDYFF--PQHQLVPPAQQGVHAVAPPAPASSGAAAPAENT 68 Query: 61 RAQALSMSP-----RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 +A+A + RV + P++ G++NL+GA+ DDL L+ Y V +SP V +L+ ++ Sbjct: 69 QAEAAAPVKDGPETRVAINAPAVQGTLNLRGARLDDLVLKHYRETVKPDSPDVRVLNSAS 128 Query: 116 TKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 T +A + + + + ++ ++ LP++NT+W SG + P+ L + N + F+ +S+ Sbjct: 129 T-HADYVDFGWRAPSDVSVRLPDANTLWK-ASGTQMDAEHPLTLSWDNGQGLTFDIRLSV 186 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 D++Y+F I V N++ + P R+ R T V EG I+V+ D L E Y Sbjct: 187 DQNYMFTISQQVHNSTGQAVALYPFYRVNRGYTPEETGGMLVHEGPISVI-DGRLNEGSY 245 Query: 235 SDIEKSSIS------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + + + W GI+DKYW +P + + + YQ Sbjct: 246 KTVRTGGVPPDNIAWSHQGTGGWAGITDKYWLMAVLPDQNANVIGTYG-FQAAQGAYQVG 304 Query: 289 FSA-NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F+A + + G++ +T +FAGAKE + YEKDL +P F +D+GW F+ +P+F Sbjct: 305 FTATAPVQVAAGQTASTEAHVFAGAKEVRLLEQYEKDLHVPMFWKAVDFGWLSFLTRPVF 364 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ + +G+FG+A++ TV VK+ F PL KQ T ++P++D +R + K P Sbjct: 365 FVLDWLNEHLGSFGLALLTFTVIVKVAFLPLTIKQMRMTWKTARLKPQVDLIRSRLKDDP 424 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 +Q+ ++ LY+ N+N G P+L+Q PVF+ +YK + +++EMRHAPF GW+KDL+A Sbjct: 425 -MAMQQQIMALYRQENVNLFGGFLPLLIQAPVFWCLYKDLYVTIEMRHAPFVGWVKDLSA 483 Query: 468 ADPTNIFTLFGILPF---YLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNW 522 DPTN+F LFG++PF ++ F+ +G WPI+ ++F+ K+S D Q ++ + Sbjct: 484 PDPTNLFNLFGLIPFDPTHITPFLALGAWPIMYGATLFLMQKVSSSSANMDPSQQKVMMF 543 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM---KMHGAEIGLID 568 +P++F F ++ P GL+IY+ WSN+++ VQQ VI+ K A+ L+ Sbjct: 544 IPLLFTFFMARQPVGLVIYYCWSNILTAVQQVVIISRLKAADAKPQLVK 592 >gi|237749310|ref|ZP_04579790.1| preprotein translocase YidC subunit [Oxalobacter formigenes OXCC13] gi|229380672|gb|EEO30763.1| preprotein translocase YidC subunit [Oxalobacter formigenes OXCC13] Length = 559 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 171/584 (29%), Positives = 265/584 (45%), Gaps = 56/584 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY-------PRIEEMNNERKNIQTVKQPNQVDNSY 53 ME + + L+V + + W N+ VY E+ + P Q + Sbjct: 1 MEAKKRTTLLLILAVSLFFLWDNWQVYRGGKSLIFTQEKAKKSETQTGLPEVPVQTASVT 60 Query: 54 A---AVLIDDRAQALSMSPR------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A A A P+ V + IN G F +L L Y +V S Sbjct: 61 AEENPAADASNAVAKKEEPKKQPVELVSITTDVFKVQINPDGGVFQNLELLKYPDNVDST 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT--TPIKLVFKN 162 +V L S Y A+ PN T +++ G+ +KLV Sbjct: 121 KDMV--LFESAPPRIYLAQTGLTGGL----YPNHATRFHIRPGERTLGENSDEVKLVMDA 174 Query: 163 A-NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQE 218 + + +T + Y+ + VTN S + I S +++R +P+ + Sbjct: 175 EQDGVRLTKTYTFKRGSYVIDVDQKVTNLSHEPINASLYLQLLRDSERPEGQSRFISTFT 234 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 G + + K+ +I + + + N W+G+ Y+ S FIP + + + K Sbjct: 235 GPAVYSEEDKFQKIKFDNIGEGKMDHAIKTDNGWVGMVQHYFVSAFIPQDKVARENYTKK 294 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + G Y TI P S + L+ G +E + P E++ D+G Sbjct: 295 V--GENLYAIGTVIPLGTIAPNASASNDTRLYVGPQESKLLEK-----TAPGLELVKDYG 347 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W IAKP+F LM++ +N VGN+G I+L T +KL+F PL+ Y S A MK P+I Sbjct: 348 WLTIIAKPIFWLMTHIHNEVGNWGWTIILLTCLIKLIFAPLSAASYRSMAKMKQFTPRIT 407 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ELRE++K Q + K ++ LYK INPL GC P+++QIPVF ++Y V+ S+E+R+AP Sbjct: 408 ELRERYKDDK-QRMNKELMGLYKAEKINPLGGCLPVVIQIPVFISLYWVLLASVEIRNAP 466 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + GWI++LAA DP I PIIM+ SMFIQ KMSPPP D QA Sbjct: 467 WLGWIQNLAAPDPYYIL-------------------PIIMAGSMFIQQKMSPPPPDPMQA 507 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ ++P+ F FP+GL++YW +N++SI QQ I K + Sbjct: 508 KMMMFLPIAFSITFFFFPSGLVLYWVVNNLLSIAQQYWITKKYD 551 >gi|114049516|ref|YP_740066.1| protein translocase subunit yidC [Shewanella sp. MR-7] gi|123030126|sp|Q0HPE6|OXAA_SHESR RecName: Full=Inner membrane protein oxaA gi|113890958|gb|ABI45009.1| protein translocase subunit yidC [Shewanella sp. MR-7] Length = 541 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 151/568 (26%), Positives = 248/568 (43%), Gaps = 47/568 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + + D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANATTNHSADVPEADTGVP- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + +K L IN G L + L+ + P V L Y Sbjct: 59 -AAMTATQNLITVKTDQLDVQINPVGGDIVFAALVSHKLEQGKDQPFVLL--EQTKDFTY 115 Query: 121 FAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + S T + L G+ T + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFAASKTEFTLADGQ---DTLEVPLTYVADNGVTYTKVFV 172 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVE 231 + I + N S ++ G+I + KP ++ G D + Sbjct: 173 FHRGKFNVDIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTQDVRYEK 232 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 K+ D+ KS++ N W + Y+ S +IP S + G A F Sbjct: 233 YKFEDMSKSNL-NQPTLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRG 289 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I PG + ++ + G K+ + L +++D+G+ +++A P+ L+ Sbjct: 290 AVYDIAPGATQEISSQFYVGPKDQKALSALSDTLN-----LVVDYGFLWWLAVPIHWLLM 344 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++ + VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + Sbjct: 345 FYQSFVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGDD-RQKM 403 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 404 GQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPY 463 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVF 529 I P++M +SMF+ KM P P D Q ++ WMPV+F Sbjct: 464 YIL-------------------PLLMGVSMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTV 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FP+GL++YW N+++I+QQ +I Sbjct: 505 FFLWFPSGLVLYWLVGNIVAIIQQKIIY 532 >gi|126176561|ref|YP_001052710.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS155] gi|153002875|ref|YP_001368556.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS185] gi|217975463|ref|YP_002360214.1| YidC translocase/secretase [Shewanella baltica OS223] gi|304412702|ref|ZP_07394305.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Shewanella baltica OS183] gi|307305833|ref|ZP_07585579.1| membrane protein insertase [Shewanella baltica BA175] gi|166977414|sp|A3DAS8|OXAA_SHEB5 RecName: Full=Inner membrane protein oxaA gi|166977415|sp|A6WUK4|OXAA_SHEB8 RecName: Full=Inner membrane protein oxaA gi|254778161|sp|B8EDW5|OXAA_SHEB2 RecName: Full=Inner membrane protein oxaA gi|125999766|gb|ABN63841.1| protein translocase subunit yidC [Shewanella baltica OS155] gi|151367493|gb|ABS10493.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS185] gi|217500598|gb|ACK48791.1| YidC translocase/secretase [Shewanella baltica OS223] gi|304348912|gb|EFM13327.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Shewanella baltica OS183] gi|306911326|gb|EFN41752.1| membrane protein insertase [Shewanella baltica BA175] Length = 541 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 149/568 (26%), Positives = 248/568 (43%), Gaps = 47/568 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + + D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSLVANAANSHSADVPEADTGVP- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + S + +K L IN G L + ++ + P V L Y Sbjct: 59 -AAVTATSKLITVKTDQLDVQINPIGGDIVFAALVSHKMEQDKDQPFVLL--EQTKDFTY 115 Query: 121 FAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + + T + L G+ T + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFSTAATEYTLAEGQ---DTLEVPLTYVADNGVTYTKVFV 172 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVE 231 + + + N S ++ G+I + KP ++ G D + Sbjct: 173 FHRGKFNVDVDYKINNTSAAPLQVQMYGQIKQTIKPSESSMVMPTYRGGAFSTQDVRYEK 232 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 K+ D+ KS++ N W + Y+ S +IP S + G A F Sbjct: 233 YKFDDMAKSNL-NQATLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRG 289 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I PG + ++ + G K+ + L +++D+G+ +++A P+ L+ Sbjct: 290 AVYDIAPGATQEISSQFYVGPKDQKALSAISDTLN-----LVVDYGFLWWLAVPIHWLLM 344 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++ + VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + Sbjct: 345 FYQSFVGNWGMAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLTDLKERFGDD-RQKM 403 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM++LYK +NP+ GC PI+LQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 404 GQAMMELYKKEKVNPMGGCLPIILQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPY 463 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVF 529 I P++M +SMF+ KM P P D Q ++ WMPV+F Sbjct: 464 YIL-------------------PLLMGVSMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTV 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 505 FFLWFPAGLVLYWLVGNIVAITQQKIIY 532 >gi|261868618|ref|YP_003256540.1| putative inner membrane protein translocase component YidC [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413950|gb|ACX83321.1| putative inner membrane protein translocase component YidC [Aggregatibacter actinomycetemcomitans D11S-1] Length = 543 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 155/583 (26%), Positives = 271/583 (46%), Gaps = 51/583 (8%) Query: 1 MERNW--NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + +S I+ WQ Y P+ + E+ P + A + Sbjct: 1 MDSRRGLLVIALLFMSFIVYQQWQLDYHTPKP--VTTEQTAASASDVPASSNAGNAVIAT 58 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D +A + L+N IN G L Y ++ SN+P + L + ++ Sbjct: 59 DTQA----KGKIITLENDVFCLKINTLGGDVVSSELLKYDAELDSNTPFMLL--QNTPQH 112 Query: 119 AYFAELDYVSTAN------NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ + + + L G+ + LV+ + + + + Sbjct: 113 VYIAQSGLIGKDGIDTKSGRADYQADGDNFKLADGQ---NELSVPLVYV-KDGVTYRKVF 168 Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLV 230 +L Y + + N S I P G++ +++ N G + + Sbjct: 169 TLKRGEYNIAVNYEINNQSDKTIEVEPYGQLRHTLVESSGNVAMPTYTGGAYSSSETNYK 228 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + +SD+E +++S + W+ + Y+ S +IP+++ + + + + Sbjct: 229 KYSFSDMENANLS-INTKAGWVAVLQHYFVSAWIPNQDADNQ-LYTLIDKANNIGSIGYR 286 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 +I P + T T+ L+ G K + ++ +D+GW +FIAKP+F L+ Sbjct: 287 GPVTSIQPNTTETLTSKLWTGPKLQNEMAQVAN-----HLDLTVDYGWAWFIAKPLFWLL 341 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++ LV N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F + Q Sbjct: 342 TFIQKLVHNWGVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKLREMRERFGED-RQR 400 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M++LYK +NPL GC P+LLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 401 MSQEMMKLYKDEKVNPLGGCLPLLLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDP 460 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PI+M SMF+ KMSP P AD Q ++ +MP++F+ Sbjct: 461 YYIL-------------------PILMGASMFLLQKMSPTPVADPMQQKVMTFMPLIFMV 501 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 FPAGL++YW SN+I+I+QQ +I + + GL R + Sbjct: 502 FFLWFPAGLVLYWLVSNLITIIQQQLIYR-GLEKKGLHTRHKK 543 >gi|113972267|ref|YP_736060.1| protein translocase subunit yidC [Shewanella sp. MR-4] gi|123129963|sp|Q0HD64|OXAA_SHESM RecName: Full=Inner membrane protein oxaA gi|113886951|gb|ABI41003.1| protein translocase subunit yidC [Shewanella sp. MR-4] Length = 541 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 151/568 (26%), Positives = 247/568 (43%), Gaps = 47/568 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + + D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANATTNHSADVPEADTGVP- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + +K L IN G L + L+ + P V L Y Sbjct: 59 -AAMTATQNLITVKTDQLDVQINPVGGDIVFAALVSHKLEQGKDQPFVLL--EQTKDFTY 115 Query: 121 FAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + S T + L G+ T + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFAASKTEFTLADGQ---DTLEVPLTYVADNGVTYTKVFV 172 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVE 231 + I + N S ++ G+I + KP ++ G D + Sbjct: 173 FHRGKFNVDIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTQDVRYEK 232 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 K+ D+ KS++ N W + Y+ S +IP S + G A F Sbjct: 233 YKFEDMSKSNL-NQPTLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRG 289 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I PG + ++ + G K+ + L +++D+G+ +++A P+ L+ Sbjct: 290 AVYDIAPGATQEISSQFYVGPKDQKALSALSDTLN-----LVVDYGFLWWLAVPIHWLLM 344 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++ + VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + Sbjct: 345 FYQSFVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGDD-RQKM 403 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 404 GQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPY 463 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVF 529 I P++M SMF+ KM P P D Q ++ WMPV+F Sbjct: 464 YIL-------------------PLLMGASMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTV 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FP+GL++YW N+++I+QQ +I Sbjct: 505 FFLWFPSGLVLYWLVGNIVAIIQQKIIY 532 >gi|120600874|ref|YP_965448.1| 60 kDa inner membrane insertion protein [Shewanella sp. W3-18-1] gi|146295080|ref|YP_001185504.1| 60 kDa inner membrane insertion protein [Shewanella putrefaciens CN-32] gi|166977417|sp|A4YCM2|OXAA_SHEPC RecName: Full=Inner membrane protein oxaA gi|166977419|sp|A1RQE9|OXAA_SHESW RecName: Full=Inner membrane protein oxaA gi|120560967|gb|ABM26894.1| protein translocase subunit yidC [Shewanella sp. W3-18-1] gi|145566770|gb|ABP77705.1| protein translocase subunit yidC [Shewanella putrefaciens CN-32] gi|319428593|gb|ADV56667.1| inner membrane insertase, YidC [Shewanella putrefaciens 200] Length = 541 Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats. Identities = 148/568 (26%), Positives = 246/568 (43%), Gaps = 47/568 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + V + D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSLVANVASTHSADVPEADTGVP- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + +K L IN G L + ++ P V L Y Sbjct: 59 -AAVAASKNLITVKTDQLDVQINPVGGDIVFAALVSHKMEQGKEQPFVLL--EQTKDYTY 115 Query: 121 FAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + S T + L G+ T + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSANGRAAFTTSATEFTLAEGQ---DTLEVPLTYVADNGVTYTKVFV 172 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVE 231 + + + N S ++ G+I + KP ++ G D + Sbjct: 173 FHRGKFNVDVDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGGAFSTNDVRYEK 232 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D+ KS++ N W + Y+ S ++P S + G A F Sbjct: 233 YNFDDMAKSNL-NQATLGGWAAMLQHYFVSAWVPPATDSNTIFSSVSAGGLAN--IGFRG 289 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I PG S ++ + G K+ + +++D+G+ +++A P+ L+ Sbjct: 290 AVYDIAPGASQEISSQFYVGPKDQAALSAIS-----ETLNLVVDYGFLWWLAVPIHWLLM 344 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++ + VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + Sbjct: 345 FYQSFVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLADLKERFGDD-RQKM 403 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM++LYK +NP+ GC PI+LQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 404 GQAMMELYKKEKVNPMGGCLPIILQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPY 463 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVF 529 I P++M +SMFI KM P P D Q ++ WMPV+F Sbjct: 464 YIL-------------------PLLMGVSMFIMQKMQPIAPTMDPMQVKMMQWMPVIFTV 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FP+GL++YW N+++I+QQ +I Sbjct: 505 FFLWFPSGLVLYWLVGNIVAIIQQKIIY 532 >gi|254000529|ref|YP_003052592.1| 60 kDa inner membrane insertion protein [Methylovorus sp. SIP3-4] gi|253987208|gb|ACT52065.1| 60 kDa inner membrane insertion protein [Methylovorus sp. SIP3-4] Length = 549 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 154/578 (26%), Positives = 262/578 (45%), Gaps = 43/578 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFY--VYPRIEEMNNERKNIQTVKQPNQVDNSYAAV-L 57 M+ + + S I+ W + P E + E +V ++ + AA + Sbjct: 1 MD-TKRLILFVIFSFSILMLWDAWQREHTPPPETVTAEAATDNSVPHAEKLPGAKAAADM 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + L + R++++ I+ G L L + D S+ V LL Sbjct: 60 PKESGFRLQTADRIQVETDVYKAVIDTTGGDLRRLELLKHRADNSTTENFV-LLDDRAAP 118 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 Y A+ + LPN TV+ + + T ++L +A+ + ++ + Sbjct: 119 MVYVAQSGLIGQG----LPNHKTVFTAEASNYQLAAGSDTLEVRLTAASADGVKVDKIYT 174 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVE 231 + Y+ + + N S I + +++ + ++ G + Sbjct: 175 FHRDSYVINLRYEIHNESASPIDPTVYYQVVHDTESNQGSHMMPTFTGGAYFTQADKFKK 234 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D+ K+ +S S+ W+G+ Y+ S +IP + + K L+D Y + Sbjct: 235 LSFKDMGKNDLSK-TTSDGWVGLLQHYFVSAWIPKEGVTRQFYSKKLADN--IYSIGTKS 291 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + I PG S +AG + + P E +D+GW IA P+F ++S Sbjct: 292 DIGVIAPGASAEVDARYYAGPQNQEVMKQV-----APGLEYTVDYGWLTIIASPLFWILS 346 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++V N+G+AI+L TV +KL F+PL+ Y S A+M+ + P++ L+E++ Q + Sbjct: 347 KIESVVHNWGVAIILLTVMIKLAFYPLSAASYRSMAHMRELAPRLQRLKEQYGDD-RQKM 405 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q AM++LYKT INP+ GC PIL+QIPVF ++Y V+ S+EMRHAPF WI DL+A DP Sbjct: 406 QVAMMELYKTEKINPMGGCLPILVQIPVFISLYWVLLGSVEMRHAPFMLWIHDLSAIDPY 465 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 + PI+M +M IQ +++P P D QA ++ MP+VF Sbjct: 466 YVL-------------------PILMGATMIIQTRLNPTPTDPVQAKVMMIMPIVFSVFF 506 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 FPAGL++YW +NV+SI QQ I + L + Sbjct: 507 FFFPAGLVLYWLVNNVLSIAQQWHINRSTERATALKKK 544 >gi|313202488|ref|YP_004041146.1| 60 kda inner membrane insertion protein [Methylovorus sp. MP688] gi|312441804|gb|ADQ85910.1| 60 kDa inner membrane insertion protein [Methylovorus sp. MP688] Length = 549 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 154/578 (26%), Positives = 262/578 (45%), Gaps = 43/578 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFY--VYPRIEEMNNERKNIQTVKQPNQVDNSYAAV-L 57 M+ + + S I+ W + P E + E +V ++ + AA + Sbjct: 1 MD-TKRLILFVIFSFSILMLWDAWQREHTPPPETVTAEAATDNSVPHAEKLPGAKAAADM 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + L + R++++ I+ G L L + D S+ V LL Sbjct: 60 PKESGFRLQTADRIQVETDVYKAVIDTTGGDLRRLELLKHRADNSTTENFV-LLDDRAAP 118 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 Y A+ + LPN TV+ + + T ++L +A+ + ++ + Sbjct: 119 MVYVAQSGLIGQG----LPNHKTVFTAEASNYQLAAGSDTLEVRLTAASADGVKVDKIYT 174 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVE 231 + Y+ + + N S I + +++ + ++ G + Sbjct: 175 FHRDSYVINLRYEIHNESASPIDPTVYYQVVHDTESNQGSHMMPTFTGGAYFTQADKFKK 234 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D+ K+ +S S+ W+G+ Y+ S +IP + + K L+D Y + Sbjct: 235 LSFKDMGKNDLSK-TTSDGWVGLLQHYFVSAWIPKEGVTRQFYSKKLADN--IYSIGTKS 291 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + I PG S +AG + + P E +D+GW IA P+F ++S Sbjct: 292 DIGVIAPGASAEVEARYYAGPQNQEVMKQV-----APGLEYTVDYGWLTIIASPLFWILS 346 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++V N+G+AI+L TV +KL F+PL+ Y S A+M+ + P++ L+E++ Q + Sbjct: 347 KIESVVHNWGVAIILLTVMIKLAFYPLSAASYRSMAHMRELAPRLQRLKEQYGDD-RQKM 405 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q AM++LYKT INP+ GC PIL+QIPVF ++Y V+ S+EMRHAPF WI DL+A DP Sbjct: 406 QVAMMELYKTEKINPMGGCLPILVQIPVFISLYWVLLGSVEMRHAPFMLWIHDLSAIDPY 465 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 + PI+M +M IQ +++P P D QA ++ MP+VF Sbjct: 466 YVL-------------------PILMGATMIIQTRLNPTPTDPVQAKVMMIMPIVFSVFF 506 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 FPAGL++YW +NV+SI QQ I + L + Sbjct: 507 FFFPAGLVLYWLVNNVLSIAQQWHINRSTERATALKKK 544 >gi|117918465|ref|YP_867657.1| protein translocase subunit yidC [Shewanella sp. ANA-3] gi|166977418|sp|A0KR32|OXAA_SHESA RecName: Full=Inner membrane protein oxaA gi|117610797|gb|ABK46251.1| 60 kDa inner membrane insertion protein [Shewanella sp. ANA-3] Length = 541 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 149/568 (26%), Positives = 247/568 (43%), Gaps = 47/568 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + + D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANATTNHSADVPEADTSVP- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + +K L IN G L + L+ + P V L Y Sbjct: 59 -AALTATQNLITVKTDQLDVQINPVGGDIVFAALVSHKLEQGKDQPFVLL--EQTKDFTY 115 Query: 121 FAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + + T + L G+ T + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFAANKTEFTLADGQ---DTLEVPLTYVADNGVTYTKVFV 172 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVE 231 + I + N S ++ G+I + KP ++ G D + Sbjct: 173 FHRGKFNVDIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTQDVRYEK 232 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 K+ D+ KS++ N W + Y+ S +IP S + G A F Sbjct: 233 YKFEDMSKSNL-NQPTLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRG 289 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I PG + ++ + G K+ + L +++D+G+ +++A P+ L+ Sbjct: 290 AVYDIAPGATQEISSQFYVGPKDQKALSALSDTLN-----LVVDYGFLWWLAVPIHWLLM 344 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++ + VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + Sbjct: 345 FYQSFVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGDD-RQKM 403 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 404 GQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPY 463 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVF 529 I P++M SMF+ KM P P D Q ++ WMP++F Sbjct: 464 YIL-------------------PLLMGASMFVMQKMQPIAPTMDPMQVKMMQWMPMIFTV 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FP+GL++YW N+++I+QQ +I Sbjct: 505 FFLWFPSGLVLYWLVGNIVAIIQQKIIY 532 >gi|225630056|ref|YP_002726847.1| putative inner membrane protein translocase component YidC [Wolbachia sp. wRi] gi|225592037|gb|ACN95056.1| putative inner membrane protein translocase component YidC [Wolbachia sp. wRi] Length = 566 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 215/571 (37%), Positives = 337/571 (59%), Gaps = 21/571 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + +A LS++I+ +W+ Y N Q + + + N A ++ + Sbjct: 1 MSEAKSLILAAILSMLIMVSWRIIYDNFFSTNQN------QPLIEHIESFNDLAPIIHQN 54 Query: 61 RAQALSMS--PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R++ ++ + RV L N + GSI+LKGA+FDDL L YHL+ SS+SP V LLSP+ +K+ Sbjct: 55 RSEIINSTREQRVSLTNNMIKGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESKD 114 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YFAE ++ +N I++P+S VW + L + N N ILF I+LD++Y Sbjct: 115 VYFAEFGWLDPSNKIKVPDSKAVWRADK----LNQKEVNLSWDNENGILFRMKINLDDNY 170 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +FK+ V NN+ D + P G+I R + + + EG + D L E Y DI Sbjct: 171 MFKVEQVVENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAF-DNKLEEWTYKDIS 229 Query: 239 KSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGH-ARYQAKFSANEITI 296 K + + S +W G +DKYW +V IP K + K+ + ++Q F + +I Sbjct: 230 KKHLIKANTSEKNWFGFADKYWLTVIIPEKSDKINVSIKHTNANDIDKFQVDFVKSYKSI 289 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 LPG S + N+ FAGAK+ + Y+ L IP F+ +D+G YFI KP+F+L+ YF + Sbjct: 290 LPGASTSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFV 349 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + NFG+AI+L T+ +KLL PL+ + YVS +K++QP++ ++E +K + K I Sbjct: 350 LKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKVKSLQPELTRVKELYKNDSLK-QHKETI 408 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 L+K +N+NP++ +P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL+A DPTNIFTL Sbjct: 409 ALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFFLWIKDLSAPDPTNIFTL 468 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFALSS 533 FG+ + P + +GI PII +M IQ K+S D Q ++ ++P + VF SS Sbjct: 469 FGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFSS 526 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 FPAGL+IYW +SN+I+++QQ++I ++ Sbjct: 527 FPAGLVIYWIFSNIITLIQQSLIKLFLTKKV 557 >gi|311109680|ref|YP_003982533.1| preprotein translocase subunit YidC [Achromobacter xylosoxidans A8] gi|310764369|gb|ADP19818.1| preprotein translocase subunit YidC [Achromobacter xylosoxidans A8] Length = 558 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 147/583 (25%), Positives = 251/583 (43%), Gaps = 47/583 (8%) Query: 5 WNYFVAIALSVIIVYAWQNFYVY--------PRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 + + S ++ W N+ ++ P +E + P+ A Sbjct: 4 RRTVLWMIFSFSLLLLWNNWQIHNGKPSLFGPTPAATTSEPQAAANNATPSVPSAPVPAT 63 Query: 57 LIDDRAQALSM-----SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + S V + L + + GAQ L Y + P V L Sbjct: 64 AAASAVPGAAAPVAARSEEVVITTDVLRLTFDTMGAQLVRAELLKYPATGQPDKPTVLLD 123 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFER 170 + Y + V N P T + ++S + + + F+ + + Sbjct: 124 RAAGLN--YVVQTGVVGAPNGQSFPTHQTPFRIVSSERQLTGDNLVVAFEGESGGVKVTK 181 Query: 171 TISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDK 227 T +L Y + + N + + ++ R P ++ + GF Sbjct: 182 TFTLHRGRYDVDVRHDLANVGAAPVSPALYLQLERDGNDPADTSSFYHTFTGFAVYSEQD 241 Query: 228 SLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + +SDIEK S +S N W+ + Y+A+ ++P + ++ L Y Sbjct: 242 KFQKITFSDIEKKKASYIKQSDNGWIAVVQHYFATAWVPPQGKQRTNEL--LEVQKNLYA 299 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 A+ I PG + + L+ G ++ + P E+++D+GW IAKP+ Sbjct: 300 ARSIEAVGEIAPGAATRVDSHLWVGPQDQKAMAAL-----APGLELVVDYGWLTIIAKPL 354 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F LM++ ++L+GN+G I+ TV +K +F+PLA Y S A MK + P++ L+EK+ Sbjct: 355 FKLMTWLHSLLGNWGWTIVALTVLIKAVFYPLAAASYRSMARMKQVAPRLQALKEKYGDD 414 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q L AM+++Y+T INPL GC P+++QIPVF ++Y V+ S+EMR AP+ W+ DL+ Sbjct: 415 K-QKLNAAMMEMYRTEKINPLGGCLPMVVQIPVFISLYWVLLASVEMRGAPWILWVHDLS 473 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP I P IM +MF+Q+K++P P D QA ++ MP+V Sbjct: 474 IRDPYFIL-------------------PAIMMATMFLQIKLNPTPPDPIQAKVMMIMPLV 514 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 F + FPAGL++YW +N +SI QQ I + + Sbjct: 515 FGGMMFFFPAGLVLYWCVNNTLSIAQQWSITRAMQRKTEAAAN 557 >gi|317401604|gb|EFV82230.1| inner membrane protein oxaA [Achromobacter xylosoxidans C54] Length = 561 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 146/586 (24%), Positives = 255/586 (43%), Gaps = 50/586 (8%) Query: 5 WNYFVAIALSVIIVYAWQNFYV---YPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID-- 59 + + S ++ W N+ + P + + P +N+ +V Sbjct: 4 RRTVLWMIFSFSLLLLWNNWQIHNGKPSLFGAPTPTASTNANGTPAAANNATPSVPNAPP 63 Query: 60 -----------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A + S V + L + + GAQ L Y ++ P V Sbjct: 64 ATAAAPSAVPGAAAPVPTRSEEVVITTDVLRLTFDTLGAQLVRAELLKYPATGQADKPTV 123 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNIL 167 L + Y A+ V AN P T + ++S + + F+ + Sbjct: 124 LLDRTAGLN--YVAQTGVVGAANGQNFPTHQTPFRVVSTDRQMTGDSLAVAFEAESGGVK 181 Query: 168 FERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVL 224 +T +L Y + + N + + ++ R P ++ + G Sbjct: 182 VTKTFTLHRGRYDIDVRHDLANVGAAPVTPALYLQLERDGNDPADTSSFYHTFTGMAVYS 241 Query: 225 GDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + ++DIEK + ++ N W+ + Y+A+ ++P + +++ L Sbjct: 242 EQDKFQKMTFADIEKKKANYIKQADNGWIAVVQHYFATAWVPPQGKPRNNEV--LEVQKN 299 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y A+ I PG + + L+ G ++ + P E+++D+GW IA Sbjct: 300 LYAARTIEAVGEIAPGAAARVDSHLWVGPQDQKAMAAL-----APGLELVVDYGWLTIIA 354 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F LM++ ++++GN+G I+ TV +K LF+PLA Y S A MK + P++ L+EK+ Sbjct: 355 KPLFTLMTWLHSILGNWGWTIVALTVLIKALFYPLAAASYRSMARMKQVAPRLQALKEKY 414 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q L AM+++Y+T INPL GC P+++QIPVF ++Y V+ S+EMR AP+ W+ Sbjct: 415 GDDK-QKLNAAMMEMYRTEKINPLGGCLPMVVQIPVFISLYWVLLASVEMRGAPWILWVH 473 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I P IM +MF+Q+K++P P D QA ++ M Sbjct: 474 DLSIRDPYFIL-------------------PAIMMATMFLQIKLNPTPPDPVQAKVMMIM 514 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P+VF + FPAGL++YW +N +SI QQ I + + Sbjct: 515 PLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWSITRAMQRKTEAAAN 560 >gi|326625577|gb|EGE31922.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 531 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 140/557 (25%), Positives = 248/557 (44%), Gaps = 55/557 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AW+ ++ +Q Q + A D A + +K Sbjct: 1 MIWQAWE------------QDKNPQPQTQQTTQTTTTAAGSAADQGVPASGQGKMITVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS-----TA 130 L +IN +G + L Y ++ SN P L + + Y A+ Sbjct: 49 DVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIYQAQSGLTGRDGPDNP 106 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNN 189 N P N + + + +A F +T Y + +V N Sbjct: 107 ANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFVFKRGDYAVNVNYSVQNT 166 Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSI 242 + S G++ + T ++ F + G D+ + K+ I + Sbjct: 167 GEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNEN 226 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 N W+ + +Y+A+ +IP + + + F + G+ + A + + PG++ Sbjct: 227 LNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAIGYKAQPVLVQPGQTG 284 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 T+ L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G Sbjct: 285 AMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGF 339 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Q + M+ LYK Sbjct: 340 SIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRQSQEMMALYKAE 398 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP I Sbjct: 399 KVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSAQDPYYIL-------- 450 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y Sbjct: 451 -----------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLY 499 Query: 542 WSWSNVISIVQQAVIMK 558 + SN+++I+QQ +I + Sbjct: 500 YIVSNLVTIIQQQLIYR 516 >gi|260771041|ref|ZP_05879969.1| OxaI/YidC membrane insertion protein [Vibrio furnissii CIP 102972] gi|260613930|gb|EEX39121.1| OxaI/YidC membrane insertion protein [Vibrio furnissii CIP 102972] gi|315178632|gb|ADT85546.1| hypothetical inner membrane protein translocase component YidC [Vibrio furnissii NCTC 11218] Length = 540 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 142/571 (24%), Positives = 252/571 (44%), Gaps = 44/571 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + ++ + + Q S A Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQW----QVAKNPAPQAVEQAQTSSAVPAPSLADEFDPA 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +Q + + + + L SI+ G L Y ++ S +P V L + + + Sbjct: 56 PSQNSAAAKVITVTTDVLTLSIDTVGGDVVTAKLNQYSDELDSENPFVLL--KNTQGHQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ + N+ + + + I + ++ AN + + +T L Sbjct: 114 IAQSGLIGPQGIDLSSNNRPTYTVDADSFTLADGQDELRIPMTYQ-ANGLEYTKTFVLKR 172 Query: 177 -HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKY 234 +Y + V N+S + + ++ + + G D + + Sbjct: 173 GNYAVDVEFNVVNHSGNNATLGMYAHLRQNLLDSGGSLAMPTYRGGAYSTEDTRYKKYSF 232 Query: 235 SDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D++ +++ N W + Y+AS +IP E + + + + Sbjct: 233 DDMQDRNLAMNLANGQGWAAMIQHYFASAWIPRNEPGTNLYSRVIGNLGD---IGVRMPN 289 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 TI G+ L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 290 KTIADGQQADFKATLWVGPKLQDQMAA-----TAPNLDLVVDYGWLWFIAKPLHWLLSVI 344 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 345 QSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMSQ 403 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYKT +NPL GC PI LQ+P+F ++Y + S+E+RH+PF+GWI DL+A DP I Sbjct: 404 EMMELYKTEKVNPLGGCLPIFLQMPIFISLYWALMESVELRHSPFFGWIHDLSAQDPYYI 463 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 P++M SMF KMSP D Q I+ +MPV+F F Sbjct: 464 L-------------------PLLMGASMFFIQKMSPTTVTDPMQQKIMTFMPVMFTFFFL 504 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 505 FFPSGLVLYWLVSNIVTLIQQTLIYKGLEKK 535 >gi|24371604|ref|NP_715646.1| inner membrane protein, 60 kDa [Shewanella oneidensis MR-1] gi|38503016|sp|Q8EKT6|OXAA_SHEON RecName: Full=Inner membrane protein oxaA gi|24345354|gb|AAN53091.1|AE015452_4 inner membrane protein, 60 kDa [Shewanella oneidensis MR-1] Length = 541 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 147/568 (25%), Positives = 246/568 (43%), Gaps = 47/568 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + + D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANATTNHSADVPEADTGVP- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + +K L IN G L + L+ + P V L Y Sbjct: 59 -AAVAATQNLITVKTDQLDVQINPVGGDIVYAALVSHKLEQGKDQPFVLL--EQTKDFTY 115 Query: 121 FAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + S T + L G+ + + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSAKGRAIFAASKTEFTLADGQ---DSLEVPLTYVAENGVTYTKVFV 172 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVE 231 + I + N S ++ G+I + KP ++ G + Sbjct: 173 FHRGKFNVNIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTASVRYEK 232 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D+ K+++ N W + Y+ S +IP S + G A F Sbjct: 233 YNFEDMGKNNL-NQPTIGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRG 289 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + PG + ++ + G K+ + L +++D+G+ +++A P+ L+ Sbjct: 290 AVYDVAPGATQEISSQFYVGPKDQKALSALSDTLN-----LVVDYGFLWWLAVPIHWLLM 344 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++ + VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + Sbjct: 345 FYQSFVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGDD-RQKM 403 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 404 GQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPY 463 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVF 529 I P++M +SMFI KM P P D Q ++ WMPV+F Sbjct: 464 YIL-------------------PLLMGVSMFIMQKMQPIAPTMDPMQVKMMQWMPVIFTV 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FP+GL++YW N+++I+QQ +I Sbjct: 505 FFLWFPSGLVLYWLVGNIVAIIQQKIIY 532 >gi|33151313|ref|NP_872666.1| putative inner membrane protein translocase component YidC [Haemophilus ducreyi 35000HP] gi|38502923|sp|Q7VPM2|OXAA_HAEDU RecName: Full=Inner membrane protein oxaA gi|33147533|gb|AAP95055.1| 60 kDa inner-membrane protein [Haemophilus ducreyi 35000HP] Length = 536 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 151/574 (26%), Positives = 267/574 (46%), Gaps = 56/574 (9%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M N + V + +S +I WQ + N Q Q D +A Sbjct: 1 MNSNRSLLVMGLLLVSFLIFTQWQQDF---------NPEIQAQKQAQQQSRDVPHATNTA 51 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + ++ + +++ L I+ G + +L + + S P+ L + Sbjct: 52 NAITEHMTKGKTITVESDVLRLVIDTLGGDVIESDLLAHKASLDSTDPLKLLTTE---GL 108 Query: 119 AYFAELDYVSTAN------NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ V + + L G+ + + F+ + +++ +T Sbjct: 109 IYTAQSGLVGKNGIDTHIGRAPYQVTQDHFTLAKGQ---NEIVVPMTFEQ-DGVMYTKTF 164 Query: 173 SLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLV 230 +L Y + + NNS + I P G+I ++ N G + + Sbjct: 165 TLKRGSYDVAVSFDIQNNSANTIEVQPYGQIKHSLLDSSGNLAMPTYTGGAYSSSETNYK 224 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + ++ K+++ N W+ + Y+ S ++P+++ S + + + Sbjct: 225 KYSFDEMTKANL-NIDTKGGWVALLQHYFVSAWVPNQDASNTLYSRTH---NGVATIGYR 280 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 T+ P T T+ L+ G K+ + A E+ +D+GW +FIAKP+F L+ Sbjct: 281 GPITTVKPNTKTTITSQLWTGPKDQKEMAQ-----AATHLELTVDYGWAWFIAKPLFWLL 335 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + ++++GN+G+AIM T+ VK L +PL K QY S A M+ +QPK+ ELRE++ Q Sbjct: 336 IFIHSIIGNWGLAIMGVTLVVKSLLYPLTKAQYTSMAKMRMLQPKLQELRERYGDDRQQ- 394 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M++LYK +NP+ GC P++LQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 395 MSQEMMKLYKQEKVNPMGGCLPLILQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDP 454 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 IF P++M LSMF+ KMSP AD Q ++ +MPV+F Sbjct: 455 YYIF-------------------PVLMGLSMFLLQKMSPTAVADPTQLKVMTFMPVIFTV 495 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN I+IVQQ +I + + Sbjct: 496 FFLWFPSGLVLYWLTSNCITIVQQWLIYRNLEKK 529 >gi|84394512|ref|ZP_00993222.1| putative inner membrane protein translocase component YidC [Vibrio splendidus 12B01] gi|84374865|gb|EAP91802.1| putative inner membrane protein translocase component YidC [Vibrio splendidus 12B01] Length = 540 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 150/572 (26%), Positives = 255/572 (44%), Gaps = 46/572 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + + + + Q SYA L Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQW----NVAQNPAPQAIEQAQSGSTLPAPSYADDLDPA 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Q ++ + + + L SI+ G NL Y + S V L + + + Sbjct: 56 PGQQVASAKTITVTTDVLTLSIDTVGGDVVQANLNDYSAEFDSEDTFVLL--KNEPGHQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I+L ++N +S T I + ++ AN + + +T L Sbjct: 114 IAQSGLVGPQG-IDLSSTNRPSYTVSADSFTLADGQDELRIPMTYQ-ANGLDYTKTFVLK 171 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y + V NNS F + ++ + T G D + Sbjct: 172 RGSYAMDVEYDVVNNSGTNATFGMYAHLRQNVMDDGGSLTMPTYRGGAYSTEDTRYKKYS 231 Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S N W + Y+AS +IP E + + + + Sbjct: 232 FDDMQDRNLSLNLANGQGWAAMIQHYFASAWIPRDEAGSNLYTRVIGNLGD---IGVRMP 288 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G + L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 289 NKTIATGDEASFKATLWVGPKLQDQMAAV-----APNLDLVVDYGWLWFIAKPLHTLLSF 343 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +V N+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 344 IQGIVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGDD-RQRMS 402 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC PI+LQ+P+F ++Y + S+E+RH+PF+GWI DL+A DP Sbjct: 403 QEMMELYKKEKVNPLGGCLPIILQMPIFISLYWALMESVELRHSPFFGWITDLSAQDPYY 462 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 IL-------------------PLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFF 503 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + + Sbjct: 504 LFFPSGLVLYWLVSNIVTLIQQTLIYRALEKK 535 >gi|238797847|ref|ZP_04641339.1| Inner membrane protein oxaA [Yersinia mollaretii ATCC 43969] gi|238718263|gb|EEQ10087.1| Inner membrane protein oxaA [Yersinia mollaretii ATCC 43969] Length = 531 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 146/575 (25%), Positives = 251/575 (43%), Gaps = 63/575 (10%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AWQ + + N + +Q A + +K Sbjct: 1 MIWQAWQVDNNPQSTAQTTQQTANTAPGDKASQA------------VPASGQGQLITVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 L +IN +G + NL Y + S+ L + Y A+ + Sbjct: 49 DVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFVYQAQSGLTGKSGPDNP 106 Query: 136 PN--------SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTV 186 N T + L G+ I L F + +F +T L + Y + V Sbjct: 107 ANGERPLFEVPQTSFVLADGQ---DELRIPLTFTGKDGSVFTKTFVLKRNDYAIGVDYHV 163 Query: 187 TNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG--DKSLVEQKYSDIEK 239 N S + + G++ + T +N F + A D + +SDIE Sbjct: 164 KNASDAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAFSSDDTKYKKYSFSDIED 223 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 ++ + W+ + +Y+A+ +IP+ + F G+ F + I PG Sbjct: 224 KTL-DITTKGGWVAMLQQYFATAWIPAANE--TNTFYSADLGNGLAAIGFKGMPVVIQPG 280 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN Sbjct: 281 EQKQLGATLWVGPEIQDKMAAI-----APHLDLTVDYGWLWFISQPLFKLLKFIHSFVGN 335 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + + M+ LY Sbjct: 336 WGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMSQEMMALY 394 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP I Sbjct: 395 KAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYYIL----- 449 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538 PI+M ++M+ KMSP D Q I+ +MPV+F FPAGL Sbjct: 450 --------------PILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGL 495 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++Y+ SN+++I+QQ +I + + GL R + Sbjct: 496 VLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 529 >gi|92115431|ref|YP_575359.1| putative inner membrane protein translocase component YidC [Chromohalobacter salexigens DSM 3043] gi|91798521|gb|ABE60660.1| protein translocase subunit yidC [Chromohalobacter salexigens DSM 3043] Length = 575 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 150/585 (25%), Positives = 250/585 (42%), Gaps = 55/585 (9%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ V L+ ++V W Y +E T + + A Sbjct: 13 MDVKRLLLVIPLAVLAYLLVIQWNADYGQNNVEHSAPTSVAQGTTDSDDASEGLSAPSAS 72 Query: 59 DDRAQALSMSP-------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + A S ++++ L I+ +G L + + S+ Sbjct: 73 NAGNNASPDSAGMPGEKSQTDANGLIQVRTDVLDLRIDPRGGDVVYAALPKHKASLDSDQ 132 Query: 106 PIVTLLSPSNTKNAYFAELDYV--STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 P V L N +Y A+ I T + L + + + L + Sbjct: 133 PFVLL--SDNNVRSYVAKSGLQLEGHEGRITYTPEQTEYTLGEDQ---DSLTVDLKAE-V 186 Query: 164 NNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT----FGVQE 218 N + + D + Y + + N S + G++ R + Sbjct: 187 NGVNVIKRFVFDRNAYAVHVEYRLDNESQTPVSARFIGQLARDDSDDPSQGVSMGMKSFL 246 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G + + + + DI +N W+ + Y+ S ++P + + + Sbjct: 247 GATFSTQESNYEKISFEDIRDGEFNNVESEGGWVAMIQHYFTSAWVPEQNQ--ENLYYAN 304 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 D R A F+ I PG++ L+ G K + P E+ +D+GW Sbjct: 305 IDSRDRNVAAFAGPSQQIAPGETTRMAATLYMGPKIQDRLEAI-----APHLELTVDFGW 359 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +FIA P+F L++ ++L+GN+G +I+L TV VK++ FPL+ K Y S A M+ + P++ Sbjct: 360 LWFIANPLFWLLAKIHSLIGNWGWSIVLLTVIVKIVLFPLSAKAYKSMAKMRKMGPEMKR 419 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++E++ Q + + M++ Y+ INPL GC PI++Q+PVF A+Y ++ S+E+RHAPF Sbjct: 420 IKEQYGDD-RQKMSQEMMKFYQKEKINPLGGCLPIVVQMPVFIALYWMLLESVELRHAPF 478 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DL+A DP I PIIM SMF+Q ++P P D QA Sbjct: 479 ILWINDLSAQDPYFIL-------------------PIIMGASMFVQQLLNPTPPDPMQAK 519 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 I+ +PVVF F FPAGL+IYW +NVISI+QQ +I + A+ Sbjct: 520 IMKMLPVVFTFFFLWFPAGLVIYWICNNVISILQQWIITRKIEAD 564 >gi|238753999|ref|ZP_04615358.1| hypothetical protein yruck0001_29200 [Yersinia ruckeri ATCC 29473] gi|238707751|gb|EEQ00110.1| hypothetical protein yruck0001_29200 [Yersinia ruckeri ATCC 29473] Length = 529 Score = 464 bits (1195), Expect = e-128, Method: Composition-based stats. Identities = 144/575 (25%), Positives = 250/575 (43%), Gaps = 63/575 (10%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AWQ + + + N T +Q A + +K Sbjct: 1 MIWQAWQVDNNPQTVAQTTQQTSNAATGDTASQA------------VPASGQGQLITVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS------- 128 L +IN +G + NL Y + S+ L + Y A+ Sbjct: 49 DVLSLTINTRGGDIEQANLLAYPDSLGSDKTFELL--ETTPAFVYQAQSGLTGKNGPDNP 106 Query: 129 -TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTV 186 + + L G+ I L F + +F +T + + Y + V Sbjct: 107 ANGERPLFAAAQNSFVLADGQ---DELRIPLTFTAKDGSVFTKTFIVKRNDYAIGVDYQV 163 Query: 187 TNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG--DKSLVEQKYSDIEK 239 N S + + G++ + T +N F + A + + + + IEK Sbjct: 164 KNASAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDEDNYQKYAFDKIEK 223 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + + N W+ + +Y+A+ +IP E + + F G+ F + + PG Sbjct: 224 NPL-NITTKGGWVAMLQQYFATAWIP--EANETNTFYSADLGNGLAAIGFKGTPVVVQPG 280 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + L+ G + + P ++ +D+GW +FI++P+F L+ + + VGN Sbjct: 281 EQKQLAATLWVGPEIQDKMAAI-----APHLDLTVDYGWLWFISQPLFKLLKFIHGFVGN 335 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + + M+ LY Sbjct: 336 WGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERIGDDK-QRMSQEMMALY 394 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP I Sbjct: 395 KAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYYIL----- 449 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538 PI+M ++MF KMSP D Q I+ +MPV+F FPAGL Sbjct: 450 --------------PILMGITMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGL 495 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++Y+ SN+++I+QQ +I + + GL R + Sbjct: 496 VLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 529 >gi|42520132|ref|NP_966047.1| putative inner membrane protein translocase component YidC [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409869|gb|AAS13981.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 569 Score = 464 bits (1195), Expect = e-128, Method: Composition-based stats. Identities = 213/572 (37%), Positives = 336/572 (58%), Gaps = 20/572 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-RKNIQTVKQPNQVDNSYAAVLID 59 M + +A LS++I+ +W+ Y N +NI+ ++ N A ++ Sbjct: 1 MSEAKSLILAAILSMLIMVSWRIIYDNFFSTSQNQPLIENIEHIESF----NDLAPIIYQ 56 Query: 60 DRAQALSMS--PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 +R++ ++ + RV L N + GSI+LKGA+FDDL L YHL+ SS+SP V LLSP+ +K Sbjct: 57 NRSEIINSTREQRVSLTNNMIKGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESK 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 + YFAE ++ +N I++P+S VW + L + N N ILF I+LD++ Sbjct: 117 DVYFAEFGWLDPSNKIKVPDSKAVWRADK----LNQKEVNLSWDNENGILFRMKINLDDN 172 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+FK+ V NN+ D + P G+I R + + + EG + D L E Y DI Sbjct: 173 YMFKVEQVVENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAF-DNKLEEWTYKDI 231 Query: 238 EKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEIT 295 K + S +W G +DKYW + IP K + K+ + + ++Q F + Sbjct: 232 SKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNTDKFQVDFVKPYKS 291 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 ILPG S++ N+ FAGAK+ + Y+ L IP F+ +D+G YFI KP+F+L+ YF Sbjct: 292 ILPGASVSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNF 351 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++ NFG+AI+L T+ +KLL L + Y+S +K++QP++ ++E +K + K Sbjct: 352 VLKNFGLAILLLTLVIKLLMLSLFNRSYISMFKVKSLQPELTRIKELYKNDSLK-QHKET 410 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 I L+K +N+NP++ +P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL+A DPTNIFT Sbjct: 411 IALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFFLWIKDLSAPDPTNIFT 470 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFALS 532 LFG+ + P + +GI PII +M IQ K+S D Q ++ ++P + VF S Sbjct: 471 LFGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFS 528 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 SFPAGL+IYW +SN+I+++QQ++I ++ Sbjct: 529 SFPAGLVIYWIFSNIITLIQQSLIKLFLTKKV 560 >gi|307253082|ref|ZP_07534965.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307264104|ref|ZP_07545701.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306859451|gb|EFM91481.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306870582|gb|EFN02329.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 533 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 148/561 (26%), Positives = 268/561 (47%), Gaps = 44/561 (7%) Query: 10 AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSP 69 + +S +I WQ + E ++ Q D A+ A+ + Sbjct: 3 LLLVSFLIFTQWQQDFN---PEIQAQKQAQQQAQVASQSGDVPAASNANTVIAENATQGK 59 Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 V L++ L +I+ G +L ++ +++S +P L + + T Y A+ V Sbjct: 60 TVTLESDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATT---YVAQSGLVG- 115 Query: 130 ANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVD 184 N I+ + + + + + F+ + +L+ +T L Y + Sbjct: 116 KNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFE-KDGVLYTKTFVLKRGSYDVAVNF 174 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 V N + + P G+I +++ + T G + + + + D+EK+++ Sbjct: 175 NVKNQTAATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDMEKANL- 233 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + + W+ + Y+ S ++P+++ + + + TI P T Sbjct: 234 DINTKAGWVALLQHYFVSAWVPNQDAENTIYSRT---NNGIATIGYRGPVTTIAPNSEAT 290 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G K+ + +L ++ +D+GW +FIAKP+F L+++ ++V N+G+A Sbjct: 291 ITSQLWTGPKDQKEMEATAANL-----DLTVDYGWAWFIAKPLFALLTFIQSIVTNWGLA 345 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPKI E+RE+F Q + + M++LYK Sbjct: 346 IIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGDD-RQRMSQEMMKLYKEEK 404 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP I Sbjct: 405 VNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIL--------- 455 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P++M SMF+ KMSP P D Q ++ +MPV+F FP+GL++YW Sbjct: 456 ----------PLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSGLVLYW 505 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 SN+I+IVQQ +I + + Sbjct: 506 LTSNIITIVQQWLIYRNLEKK 526 >gi|58584448|ref|YP_198021.1| putative inner membrane protein translocase component YidC [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418764|gb|AAW70779.1| Preprotein translocase subunit YidC [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 572 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 212/574 (36%), Positives = 336/574 (58%), Gaps = 17/574 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFY-VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M N +A LS++I+ +W+ Y + E+ + +NI+ ++ N A V+ Sbjct: 1 MSEARNLILAAILSILIIVSWRIIYDNFLNAEQDHPLIENIEHIESF----NDLAPVIHQ 56 Query: 60 DRAQALSMS--PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 R++ ++ + R+ L N + GSI+LKGA+FDDL L Y L+ +SP V LLSP+ +K Sbjct: 57 SRSEIINSTREQRINLTNNMVKGSISLKGARFDDLILTNYCLEPDPSSPQVVLLSPAESK 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 + YFAE ++ ++P+S T W + LT + L + N N I+F +SLD + Sbjct: 117 DVYFAEFGWLDPNGKTKVPDSKTFWQAEKTE-LTNQKAVNLFWNNENGIVFRMKVSLDNN 175 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+FK+ V NN+ D + P G+I R + + + EG + D L E Y ++ Sbjct: 176 YMFKVEQIVENNTKDNVVLVPYGKINRKRDNINESYWISHEGILGAF-DNKLEEWTYKNV 234 Query: 238 EKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGH-ARYQAKFSANEIT 295 K + S +W G +DKYW + IP K + K+ + + ++Q F Sbjct: 235 AKKHLIKASTSKKNWFGFADKYWLTAIIPEKFDKTNVSIKHTNANNVDKFQVDFVKPYKN 294 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 ILPG S + N+ FAGAK+ + +Y+ L IP F+ +D+G YFI KP+F+L+ YF Sbjct: 295 ILPGTSASNVNYFFAGAKKLNLLDYYKSTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNF 354 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++ NFG+AI+L T+ +KLL PL+ + YVS MK++QP++ ++E +K + K Sbjct: 355 VLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKMKSLQPEVARIKELYKNDSLK-QHKET 413 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 I L+K +N+NP++ PIL+QIPVFFA+YKV+ +++EMRHAPF WIKDL+ +DPTNIFT Sbjct: 414 IALFKKNNVNPMSSILPILVQIPVFFALYKVLFVTIEMRHAPFCLWIKDLSTSDPTNIFT 473 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALS 532 LFG+ + P + +GI PII+ ++M IQ K+ D QA ++ + P + +F S Sbjct: 474 LFGLFNYNFP--ISIGILPIILGITMIIQQKIGEKGQTNKDDIQANVMKFFPYISIFIFS 531 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 SFPAGL+IYW +SNVI+++QQ++I ++G+ Sbjct: 532 SFPAGLVIYWIFSNVITLIQQSLIKLFLTRKLGI 565 >gi|307246347|ref|ZP_07528425.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255333|ref|ZP_07537145.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259783|ref|ZP_07541503.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852757|gb|EFM84984.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861720|gb|EFM93702.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866173|gb|EFM98041.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 533 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 148/561 (26%), Positives = 268/561 (47%), Gaps = 44/561 (7%) Query: 10 AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSP 69 + +S +I WQ + E ++ Q D A+ A+ + Sbjct: 3 LLLVSFLIFTQWQQDFN---PEIQAQKQAQQQAQVASQSGDVPAASNANTVIAENATQGK 59 Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 V L++ L +I+ G +L ++ +++S +P L + + T Y A+ V Sbjct: 60 TVTLQSDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATT---YVAQSGLVG- 115 Query: 130 ANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVD 184 N I+ + + + + + F+ + +L+ +T L Y + Sbjct: 116 KNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFE-KDGVLYTKTFVLKRGSYDVAVNF 174 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 V N + + P G+I +++ + T G + + + + D+EK+++ Sbjct: 175 NVKNQTAATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDMEKANL- 233 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + + W+ + Y+ S ++P+++ + + + TI P T Sbjct: 234 DINTKAGWVALLQHYFVSAWVPNQDAENTIYSRT---NNGIATIGYRGPVTTIAPNSEAT 290 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G K+ + +L ++ +D+GW +FIAKP+F L+++ ++V N+G+A Sbjct: 291 ITSQLWTGPKDQKEMEATAANL-----DLTVDYGWVWFIAKPLFALLTFIQSIVTNWGLA 345 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPKI E+RE+F Q + + M++LYK Sbjct: 346 IIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGDD-RQRMSQEMMKLYKEEK 404 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP I Sbjct: 405 VNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIL--------- 455 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P++M SMF+ KMSP P D Q ++ +MPV+F FP+GL++YW Sbjct: 456 ----------PLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSGLVLYW 505 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 SN+I+IVQQ +I + + Sbjct: 506 LTSNIITIVQQWLIYRNLEKK 526 >gi|187479885|ref|YP_787910.1| putative inner membrane protein translocase component YidC [Bordetella avium 197N] gi|123513533|sp|Q2KTI5|OXAA_BORA1 RecName: Full=Inner membrane protein oxaA gi|115424472|emb|CAJ51026.1| inner-membrane protein insertion factor [Bordetella avium 197N] Length = 559 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 153/587 (26%), Positives = 261/587 (44%), Gaps = 54/587 (9%) Query: 5 WNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQ------- 48 + + S ++ W N+ + P E+ N Q P Sbjct: 4 RRTVLWMIFSFSLLLLWNNWQIHNGQPALFGGPSPEQNAPATANNQAATNPASNTPAVPN 63 Query: 49 --VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 S + + A A + + V + L + + GAQ L Y S+ P Sbjct: 64 APAATSAPSSVPGSTAPAPAQAQEVVITTDVLRLTFSSTGAQIIRAELLKYPATAGSDQP 123 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NN 165 +V L + Y A+ + N P T + + + + + + F+ Sbjct: 124 MVLL--DRSAGLTYTAQTGVIGAGQN--FPTHLTPFAVTTNERELTGDKLVVRFEAESGG 179 Query: 166 ILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIA 222 + +T +LD Y + VTN S ++ R P ++ + G Sbjct: 180 LRVIKTFTLDRGSYDVHVRHDVTNVGTAAQHPSVYLQLERDGNDPAGTSSFYHTFTGVAV 239 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 + +SDI K+ S ++ N W+GI Y+A+ ++P + T + L Sbjct: 240 YSEQDKFQKVTFSDIAKNKASYIKQADNGWIGIVQHYFATAWVPKEGTPRTNDLLQLQPN 299 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + A+ + PG ++++ L+ G ++ + P E+++D+GW Sbjct: 300 --LFAARAIEALGEVAPGATVSSDAQLWVGPQDQQAMAAV-----APGLELVVDYGWLTI 352 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+F LM++ ++L+GN+G I+ TV +K +F+PLA Y S A MK + P++ L+E Sbjct: 353 IAKPLFTLMTWLHSLLGNWGWTIVALTVIIKAVFYPLASASYRSMARMKQVAPRLQALKE 412 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ Q L +AM+++Y+T INPL GC P+++QIPVF A+Y V+ S+EMR AP+ W Sbjct: 413 KYGDD-RQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAPWILW 471 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I DL+ DP I P +M +MF+Q+K++P P D QA ++ Sbjct: 472 IHDLSVRDPYFIL-------------------PAVMMATMFLQIKLNPTPPDPVQAKVMM 512 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 MP+VF + FPAGL++YW +N +SI+QQ I + + Sbjct: 513 VMPLVFGGMMFFFPAGLVLYWCVNNTLSILQQWSITRSITRQTAKRG 559 >gi|223041690|ref|ZP_03611886.1| inner membrane protein OxaA [Actinobacillus minor 202] gi|198246541|gb|ACH82230.1| inner membrane protein OxaA [Actinobacillus minor 202] Length = 554 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 146/561 (26%), Positives = 255/561 (45%), Gaps = 54/561 (9%) Query: 21 WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIG 80 WQ + +K Q Q D A + A++ S + +++ L Sbjct: 23 WQQDFNP-----EIQAQKQAQIQAQQQSGDVPAATSQTQNVAESNSKGKTITIESDVLRL 77 Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 +++ G D +L +H ++ SN+P L N+K Y A+ + N I+ N Sbjct: 78 TVDTLGGDVIDSDLLKHHAELHSNTPFELL--QDNSKVLYIAQSGLIG-KNGIDTNNGRA 134 Query: 141 VWNLISGK----ILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIR 195 + + + L F+ + +++ +T +L Y + + NNS + + Sbjct: 135 QYQTTADSFKLADGQNEISVPLTFE-KDGVVYTKTFTLKRGSYNVGVDFNIKNNSAEAVE 193 Query: 196 FSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN---------- 244 P G++ +++ + T G + + + + ++ Sbjct: 194 VQPYGQLKHTLVESSGSLTMPTYTGGAYSSSETNYKKYSFQEMADEKKRKAEQGIANGGL 253 Query: 245 -FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + W+ I Y+ S ++P ++ + +G A + T+ P T Sbjct: 254 SIESNTGWVAILQHYFVSAWVPQQDKPMTIYTRVSDNGVA--TIGYRGALTTVAPNSDAT 311 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+ G K+ + ++ D+GW +FIAKP+F L++ +V N+G+A Sbjct: 312 ISTHLWTGPKDQKEMAE-----TAAHLDLTADYGWAWFIAKPLFWLLTNIQKVVINWGLA 366 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK L +PL K QY S A M+ +QP+I E+RE+F Q + + M++LYK Sbjct: 367 IICVTIVVKTLLYPLTKAQYTSMAKMRMLQPRIQEMRERFGDD-RQRMSQEMMKLYKEEK 425 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP I Sbjct: 426 VNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIL--------- 476 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P++M SMF+ KMSP P AD Q ++ +MPV+F FP+GL++YW Sbjct: 477 ----------PLLMGGSMFLLQKMSPTPVADPVQQKVMTFMPVMFTVFFLWFPSGLVLYW 526 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 SN I+I QQ I + + Sbjct: 527 LTSNCITIAQQWWIYRQLEKK 547 >gi|224827183|ref|ZP_03700278.1| 60 kDa inner membrane insertion protein [Lutiella nitroferrum 2002] gi|224600576|gb|EEG06764.1| 60 kDa inner membrane insertion protein [Lutiella nitroferrum 2002] Length = 550 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 151/578 (26%), Positives = 254/578 (43%), Gaps = 44/578 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ + I LS+ I+ WQ ++ + + QT + +A Sbjct: 1 MDS-KRLIIFIVLSMSILLLWQEYF---APKPTPQQLAKSQTTAGAPGAPAAPSAAAQPA 56 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A L+ R+ + I+ G L+L ++ ++ P Y Sbjct: 57 DAAKLTSGQRITVSTDLYKAEIDTVGGDLRRLDLLKHNAAEDASKPFELFTDKGG--RVY 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLI--SGKILTPTTPIKLVFKNANNILFERTISLDEH- 177 A+ V+ A+N LP TV+ S ++ +KL AN + + + + Sbjct: 115 VAQTGLVA-ASNPALPTHKTVFTAEKTSYQMNGDKLEVKLTAPEANGVKVSKVYTFKKGA 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + ++N+ + + R++R KP+ G D + + Sbjct: 174 YDIDVRYDISNSGSAPVAPTAYFRLLRDGQKPEGEGRFASTFTGPAVYTTDGKFQKVSFD 233 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFI--PSKETSFHSQFKY----LSDGHARYQAK 288 D+ K + N W+ + Y+ S +I P S + + L + + A Sbjct: 234 DLTKGKGDYVKSADNGWVSMLQHYFMSAWIIKPLGGQSVCAAGQPCRFELKSSNGLFSAA 293 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + I PG S + T L+AG +EF I + E D+GW + A P+F Sbjct: 294 TLVDLPAIAPGASRSITVPLYAGPEEFDIITKVADGM-----EYAKDYGWVHIFASPLFW 348 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L++ + LV N+G AI+L T+ VK LF+PL Y S MK + P+++ L+E++ Sbjct: 349 LLTKLHALVNNWGWAIILLTLTVKALFYPLTAASYRSMGKMKALAPRLERLKEQYGDD-R 407 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +Q+A++++YK+ +NPL GC P+++QIPVF +Y + S+E+R AP+ WI DLA Sbjct: 408 MKMQQAVMEMYKSEKVNPLGGCLPMVIQIPVFIGLYWSLLASVELRQAPWTLWINDLARP 467 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + P IM+++MF+Q ++PPPAD QA ++ MP+ F Sbjct: 468 DPFYVL-------------------PAIMAITMFLQTFLNPPPADPMQAKMMKIMPLAFS 508 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 FPAGL++YW +NV+SI QQ I K L Sbjct: 509 AMFFFFPAGLVLYWVVNNVLSIAQQWYINKQIEKAKKL 546 >gi|107104669|ref|ZP_01368587.1| hypothetical protein PaerPA_01005748 [Pseudomonas aeruginosa PACS2] Length = 578 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 148/607 (24%), Positives = 260/607 (42%), Gaps = 79/607 (13%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + VA+A+ S ++V W Y P + + Q + + + V Sbjct: 1 MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMNTTQGLPDTPSASGTSSDVPT 60 Query: 59 DDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPIV 108 + A S + +++K L +I+ +G L L Y + + P Sbjct: 61 AQSSAAGSEAADKPVAVSGKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFP 120 Query: 109 TLLSPSNTKNAYFAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 L + + Y A+ +A ++ + + L G+ + L F Sbjct: 121 --LFDNGRERTYLAQSGLTGADGPDASSAGRPLFHSAQSSYQLADGQ---NELVVDLSF- 174 Query: 162 NANNILFERTISLDEH----------------------YLFKIVDTVTNNSIDQIRFSPR 199 + + + + + + Y + + N S + Sbjct: 175 SHDGVNYIKRFTFHRGLKADCSDKEKAQKKIECINENAYQVGVSYLIDNQSGKTWSGNLF 234 Query: 200 GRIMRHKPQTATNT----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGIS 255 ++ R ++T G D + D++K W+ Sbjct: 235 AQLKRDGSADPSSTTATGVSTYLGAAVWTPDSPYKKISTKDMDKEQFKE-SVQGGWVAWL 293 Query: 256 DKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315 Y+ + ++P+K + DG Y F+ +++ G + T L+AG K Sbjct: 294 QHYFVTAWVPTKGEQHQVMTR--KDGQGNYIVGFTGPTLSVPAGSKVETDLTLYAGPK-- 349 Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 + + K+L+ P E+ +D+G+ +FIA+P+F L+ + ++L+GN+G +I+ TV +KL F Sbjct: 350 --LQKHLKELS-PGLELTVDYGFLWFIAQPIFWLLQHIHSLIGNWGWSIIALTVLIKLAF 406 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 FPL+ Y S A M+ + PK+ ++E+ Q + +AM++LYK INPL GC PIL+ Sbjct: 407 FPLSAASYRSMARMRAVSPKMQAIKEQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILV 465 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+PVF ++Y V+ S+EMR AP+ GWI DL+ DP I PI Sbjct: 466 QMPVFLSLYWVLLESVEMRQAPWLGWITDLSVKDPFFIL-------------------PI 506 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 +M +M IQ ++P P D QA ++ MP++F F FPAGL++YW +N +SI QQ Sbjct: 507 VMGGTMLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWY 566 Query: 556 IMKMHGA 562 I + A Sbjct: 567 ITRKIEA 573 >gi|116053719|ref|YP_794046.1| putative inner membrane protein translocase component YidC [Pseudomonas aeruginosa UCBPP-PA14] gi|218894670|ref|YP_002443540.1| putative inner membrane protein translocase component YidC [Pseudomonas aeruginosa LESB58] gi|296392435|ref|ZP_06881910.1| putative inner membrane protein translocase component YidC [Pseudomonas aeruginosa PAb1] gi|313111480|ref|ZP_07797281.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa 39016] gi|122256261|sp|Q02DE0|OXAA_PSEAB RecName: Full=Inner membrane protein oxaA gi|254773013|sp|B7V7A5|OXAA_PSEA8 RecName: Full=Inner membrane protein oxaA gi|115588940|gb|ABJ14955.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa UCBPP-PA14] gi|218774899|emb|CAW30718.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa LESB58] gi|310883783|gb|EFQ42377.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa 39016] Length = 578 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 148/607 (24%), Positives = 260/607 (42%), Gaps = 79/607 (13%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + VA+A+ S ++V W Y P + + Q + + + V Sbjct: 1 MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMNTTQGLPDTPSASGTSSDVPT 60 Query: 59 DDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPIV 108 + A S + +++K L +I+ +G L L Y + + P Sbjct: 61 AQSSAAGSEAADKPVAVSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFP 120 Query: 109 TLLSPSNTKNAYFAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 L + + Y A+ +A ++ + + L G+ + L F Sbjct: 121 --LFDNGRERTYLAQSGLTGADGPDASSAGRPLFHSAQSSYQLADGQ---NELVVDLSF- 174 Query: 162 NANNILFERTISLDEH----------------------YLFKIVDTVTNNSIDQIRFSPR 199 + + + + + + Y + + N S + Sbjct: 175 SHDGVNYIKRFTFHRGLKADCSDKEKAQKKIECINENAYQVGVSYLIDNQSGKTWSGNLF 234 Query: 200 GRIMRHKPQTATNT----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGIS 255 ++ R ++T G D + D++K W+ Sbjct: 235 AQLKRDGSADPSSTTATGVSTYLGAAVWTPDSPYKKISTKDMDKEQFKE-SVQGGWVAWL 293 Query: 256 DKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315 Y+ + ++P+K + DG Y F+ +++ G + T L+AG K Sbjct: 294 QHYFVTAWVPTKGEQHQVMTR--KDGQGNYIVGFTGPTLSVPAGSKVETDLTLYAGPK-- 349 Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 + + K+L+ P E+ +D+G+ +FIA+P+F L+ + ++L+GN+G +I+ TV +KL F Sbjct: 350 --LQKHLKELS-PGLELTVDYGFLWFIAQPIFWLLQHIHSLIGNWGWSIIALTVLIKLAF 406 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 FPL+ Y S A M+ + PK+ ++E+ Q + +AM++LYK INPL GC PIL+ Sbjct: 407 FPLSAASYRSMARMRAVSPKMQAIKEQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILV 465 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+PVF ++Y V+ S+EMR AP+ GWI DL+ DP I PI Sbjct: 466 QMPVFLSLYWVLLESVEMRQAPWLGWITDLSVKDPFFIL-------------------PI 506 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 +M +M IQ ++P P D QA ++ MP++F F FPAGL++YW +N +SI QQ Sbjct: 507 VMGGTMLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWY 566 Query: 556 IMKMHGA 562 I + A Sbjct: 567 ITRKIEA 573 >gi|307250692|ref|ZP_07532629.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307257502|ref|ZP_07539268.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306857300|gb|EFM89419.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306864014|gb|EFM95931.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 533 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 148/561 (26%), Positives = 268/561 (47%), Gaps = 44/561 (7%) Query: 10 AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSP 69 + +S +I WQ + E ++ Q D A+ A+ + Sbjct: 3 LLLVSFLIFTQWQQDFN---PEIQAQKQAQQQAQVASQSGDVPAASNANTVIAENATQGK 59 Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 V L++ L +I+ G +L ++ +++S +P L + + T Y A+ V Sbjct: 60 TVTLQSDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATT---YVAQSGLVG- 115 Query: 130 ANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVD 184 N I+ + + + + + F+ + +L+ +T L Y + Sbjct: 116 KNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFE-KDGVLYTKTFVLKRGSYDVAVNF 174 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 V N + + P G+I +++ + T G + + + + D+EK+++ Sbjct: 175 NVKNQTAATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDMEKANL- 233 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + + W+ + Y+ S ++P+++ + + + TI P T Sbjct: 234 DINTKAGWVALLQHYFVSAWVPNQDAENTIYSRT---NNGIATIGYRGPVTTIAPNSEAT 290 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G K+ + +L ++ +D+GW +FIAKP+F L+++ ++V N+G+A Sbjct: 291 ITSQLWTGPKDQKEMEATAANL-----DLTVDYGWAWFIAKPLFALLTFIQSIVTNWGLA 345 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPKI E+RE+F Q + + M++LYK Sbjct: 346 IIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGDD-RQRMSQEMMKLYKEEK 404 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP I Sbjct: 405 VNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIL--------- 455 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P++M SMF+ KMSP P D Q ++ +MPV+F FP+GL++YW Sbjct: 456 ----------PLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSGLVLYW 505 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 SN+I+IVQQ +I + + Sbjct: 506 LTSNIITIVQQWLIYRNLEKK 526 >gi|240949810|ref|ZP_04754139.1| putative inner membrane protein translocase component YidC [Actinobacillus minor NM305] gi|240295727|gb|EER46422.1| putative inner membrane protein translocase component YidC [Actinobacillus minor NM305] Length = 554 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 147/561 (26%), Positives = 257/561 (45%), Gaps = 54/561 (9%) Query: 21 WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIG 80 WQ + +K Q Q D A + A++ S + +++ L Sbjct: 23 WQQDFNP-----EIQAQKQAQIQAQQQSGDVPAATSQTQNVAESNSKGKTITIESDVLRL 77 Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 +++ G D +L +H ++ SN+P L N+K Y A+ + N I+ N Sbjct: 78 TVDTLGGDVIDSDLLKHHAELHSNTPFELL--QDNSKVLYVAQSGLIG-KNGIDTNNGRA 134 Query: 141 VWNLISGK----ILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIR 195 + + + L F+ + +++ +T +L Y + + NNS + + Sbjct: 135 QYQTTADSFKLAEGQNEISVPLTFE-KDGVVYTKTFTLKRGSYNVGVDFNIKNNSAEVVE 193 Query: 196 FSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN---------- 244 P G++ +++ + T G + + + + ++ Sbjct: 194 VQPYGQLKHTLVESSGSLTMPTYTGGAYSSSETNYKKYSFQEMADEKKRKAEQGIANGGL 253 Query: 245 -FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + W+ I Y+ S ++P ++ + +G A + ++ P T Sbjct: 254 SIESNTGWVAILQHYFVSAWVPQQDKPMTIYTRVSDNGVA--TIGYRGALTSVAPNSDAT 311 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+ G K+ + ++ D+GW +FIAKP+F L++ LV N+G+A Sbjct: 312 ISTHLWTGPKDQKEMAE-----TAAHLDLTADYGWAWFIAKPLFWLLTQIQKLVVNWGLA 366 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK L +PL K QY S A M+ +QP+I E+RE+F Q + + M++LYK Sbjct: 367 IICVTIVVKTLLYPLTKAQYTSMAKMRMLQPRIQEMRERFGDD-RQRMSQEMMKLYKEEK 425 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP I Sbjct: 426 VNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIL--------- 476 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P++M SMF+ KMSP P AD Q ++ +MPV+F FP+GL++YW Sbjct: 477 ----------PLLMGGSMFLLQKMSPTPIADPVQQKVMTFMPVMFTVFFLWFPSGLVLYW 526 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 SN I+IVQQ +I + + Sbjct: 527 LTSNCITIVQQWLIYRQLEKK 547 >gi|152983547|ref|YP_001351680.1| putative inner membrane protein translocase component YidC [Pseudomonas aeruginosa PA7] gi|166975880|sp|A6VF45|OXAA_PSEA7 RecName: Full=Inner membrane protein oxaA gi|150958705|gb|ABR80730.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 578 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 149/607 (24%), Positives = 259/607 (42%), Gaps = 79/607 (13%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + VA+A+ S ++V W Y P + + Q + + + V Sbjct: 1 MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMNTTQGLPDTPSAAGTSSDVPT 60 Query: 59 DDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPIV 108 A S + +++K L +I+ +G L L Y + + P Sbjct: 61 AQSGAAGSEAADKPVAVSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFP 120 Query: 109 TLLSPSNTKNAYFAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 L + + Y A+ +A ++ + L G+ + L F Sbjct: 121 --LFDNGRERTYLAQSGLTGADGPDASSAGRPLFHSAQGSYQLADGQ---NELVVDLSF- 174 Query: 162 NANNILFERTISLDEH----------------------YLFKIVDTVTNNSIDQIRFSPR 199 + + + + + + Y + + N S + Sbjct: 175 SRDGVNYIKRFTFHRGLKADCSDKEKAQKKIECINENAYQVGVSYLIDNQSGKTWSGNLF 234 Query: 200 GRIMRHKPQTATNT----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGIS 255 ++ R ++T G D + D++K W+ Sbjct: 235 AQLKRDGSADPSSTTATGVSTYLGAAVWTPDSPYKKISTKDMDKEQFKE-SVQGGWVAWL 293 Query: 256 DKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315 Y+ + ++P+K + DG Y F+ +++ G + T L+AG K Sbjct: 294 QHYFVTAWVPTKGEQHQVMTR--KDGQGNYIVGFTGPTLSVPAGGKVETDLTLYAGPK-- 349 Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 + + K+L+ P E+ +D+G+ +FIA+P+F L+ + ++L+GN+G +I+ TV +KL F Sbjct: 350 --LQKHLKELS-PGLELTVDYGFLWFIAQPIFWLLQHIHSLIGNWGWSIIALTVLIKLAF 406 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 FPL+ Y S A M+ + PK+ ++E+ Q + +AM++LYK INPL GC PIL+ Sbjct: 407 FPLSAASYRSMARMRAVSPKMQAIKEQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILV 465 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+PVF ++Y V+ S+EMR AP+ GWI DL+ DP I PI Sbjct: 466 QMPVFLSLYWVLLESVEMRQAPWLGWITDLSVKDPFFIL-------------------PI 506 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 +M +M IQ ++P P D QA ++ MP++F F FPAGL++YW +NV+SI QQ Sbjct: 507 VMGGTMLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLWFPAGLVLYWVVNNVLSIAQQWY 566 Query: 556 IMKMHGA 562 I + A Sbjct: 567 ITRKIEA 573 >gi|319945014|ref|ZP_08019276.1| YidC/Oxa1 family membrane protein insertase [Lautropia mirabilis ATCC 51599] gi|319741584|gb|EFV94009.1| YidC/Oxa1 family membrane protein insertase [Lautropia mirabilis ATCC 51599] Length = 561 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 156/586 (26%), Positives = 266/586 (45%), Gaps = 53/586 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM-----------------NNERKNIQTV 43 M+++ + + + +++ W N+ Y M + + Sbjct: 1 MQQSHKTVLWVVFILSLLFLWNNWQQYNGQPAMFGGSQQAQTAQQNTASAPQDGADTSIP 60 Query: 44 KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY-HLDVS 102 P+Q N A + D+A+ + LKN + I+ G Q L + H + Sbjct: 61 GAPSQAGNDAPASVPADQAEQAKAGQTITLKNDVIELGIDTVGGQIVSSKLLKHIHDTRN 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 +S + + S + + + V + PN T ++ ++ Sbjct: 121 PDSGNLVIQSDRKG-SFFVGQTGLVGVK---DAPNHTTPMTVVRTIETDGQVTGVVLAAE 176 Query: 163 ANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEG 219 + ERT L Y K+ + VTN + S ++ R H+ + + G Sbjct: 177 GGGLRIERTYQLSPGSYEIKVDNRVTNIGEQPLSPSLYLQLTRDTHEAPGQSGYYKTYVG 236 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYL 278 + + DIEK + +N W+GI Y+ S ++P + + + Sbjct: 237 PAIYTDADKFQKVSFDDIEKGKAKHSGRANDGWVGIIQHYFVSAWVPKQGQPREYYTRRV 296 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 G + Y A I G+S+ + LF G ++ + P ++++D+GW Sbjct: 297 --GPSTYSAGAYEQLGQISAGQSVDASETLFIGPQDQDVLAKV-----APGLDLVVDYGW 349 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IAKP+F L+++ + +VGN+G AI+ T+ VKL FFPL Y S A M+ +QP+++ Sbjct: 350 LTAIAKPLFWLLTFLHGIVGNWGWAIVALTILVKLAFFPLQAASYRSMAKMRKVQPRLNA 409 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +RE++ L +AM++LYKT INPL GC PIL+QIPVF A+Y V+ S+E+R+AP+ Sbjct: 410 IRERYGDD-RMNLNQAMMELYKTEKINPLGGCLPILVQIPVFIALYWVLLASVEIRNAPW 468 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 GWI DL++ DP I PI+M+ +MF+Q ++P PAD QA Sbjct: 469 IGWIHDLSSPDPLYIL-------------------PILMAGTMFLQTHLNPKPADPVQAK 509 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 ++ +MP++F FP+GL++YW SN+ SI QQ VI + + Sbjct: 510 MMTFMPLIFSVMFFFFPSGLVLYWVVSNIFSIAQQWVITRQIEGKP 555 >gi|238765480|ref|ZP_04626399.1| Inner membrane protein oxaA [Yersinia kristensenii ATCC 33638] gi|332163525|ref|YP_004300102.1| putative inner membrane protein translocase component YidC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|238696304|gb|EEP89102.1| Inner membrane protein oxaA [Yersinia kristensenii ATCC 33638] gi|318608031|emb|CBY29529.1| inner membrane protein translocase component YidC, long form [Yersinia enterocolitica subsp. palearctica Y11] gi|325667755|gb|ADZ44399.1| putative inner membrane protein translocase component YidC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 531 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 146/575 (25%), Positives = 251/575 (43%), Gaps = 63/575 (10%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AWQ + + N T + +Q + +K Sbjct: 1 MIWQAWQVDNNPQPAAQTTQQTANTATGDKASQA------------VPGSGQGQLITVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 L +IN +G + NL Y + S+ L + Y A+ + Sbjct: 49 DVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFIYQAQSGLTGKSGPDNP 106 Query: 136 PN--------SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTV 186 N T + L G+ I L F + +F +T L + Y + V Sbjct: 107 ANGERPLFEVPQTSFVLADGQ---DELRIPLTFTGKDGSVFTKTFVLKRNDYAIGVDYHV 163 Query: 187 TNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG--DKSLVEQKYSDIEK 239 N S + + G++ + T +N F + A + + +SDIE Sbjct: 164 KNASAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDETKYKKYSFSDIED 223 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 S+ + W+ + +Y+A+ +IP+ + F G+ F + I PG Sbjct: 224 KSL-DITTKGGWVAMLQQYFATAWIPAANE--TNTFYSADLGNGLAAIGFKGAPVVIQPG 280 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN Sbjct: 281 EQKQLGATLWVGPEIQDKMAAI-----APHLDLTVDYGWLWFISQPLFKLLKFIHSFVGN 335 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + + M+ LY Sbjct: 336 WGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMSQEMMALY 394 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP I Sbjct: 395 KAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYYIL----- 449 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538 PI+M ++M+ KMSP D Q I+ +MPV+F FPAGL Sbjct: 450 --------------PILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGL 495 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++Y+ SN+++I+QQ +I + + GL R + Sbjct: 496 VLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 529 >gi|15600761|ref|NP_254255.1| inner membrane protein translocase component YidC [Pseudomonas aeruginosa PAO1] gi|38503188|sp|Q9HT06|OXAA_PSEAE RecName: Full=Inner membrane protein oxaA gi|9951909|gb|AAG08953.1|AE004968_7 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 578 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 148/607 (24%), Positives = 260/607 (42%), Gaps = 79/607 (13%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + VA+A+ S ++V W Y P + + Q + + + V Sbjct: 1 MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMNTTQGLPDTPSASGTSSDVPT 60 Query: 59 DDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPIV 108 + A S + +++K L +I+ +G L L Y + + P Sbjct: 61 AQSSAAGSEAADKPVAVSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFP 120 Query: 109 TLLSPSNTKNAYFAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 L + + Y A+ +A ++ + + L G+ + L F Sbjct: 121 --LFDNGRERTYLAQSGLTGADGPDASSAGRPLFRSAQSSYQLADGQ---NELVVDLSF- 174 Query: 162 NANNILFERTISLDEH----------------------YLFKIVDTVTNNSIDQIRFSPR 199 + + + + + + Y + + N S + Sbjct: 175 SHDGVNYIKRFTFHRGLKADCSDKEKAQKKIECINENAYQVGVSYLIDNQSGKTWSGNLF 234 Query: 200 GRIMRHKPQTATNT----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGIS 255 ++ R ++T G D + D++K W+ Sbjct: 235 AQLKRDGSADPSSTTATGVSTYLGAAVWTPDSPYKKISTKDMDKEQFKE-SVQGGWVAWL 293 Query: 256 DKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315 Y+ + ++P+K + DG Y F+ +++ G + T L+AG K Sbjct: 294 QHYFVTAWVPTKGEQHQVMTR--KDGQGNYIVGFTGPTLSVPAGSKVETDLTLYAGPK-- 349 Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 + + K+L+ P E+ +D+G+ +FIA+P+F L+ + ++L+GN+G +I+ TV +KL F Sbjct: 350 --LQKHLKELS-PGLELTVDYGFLWFIAQPIFWLLQHIHSLIGNWGWSIIALTVLIKLAF 406 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 FPL+ Y S A M+ + PK+ ++E+ Q + +AM++LYK INPL GC PIL+ Sbjct: 407 FPLSAASYRSMARMRAVSPKMQAIKEQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILV 465 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+PVF ++Y V+ S+EMR AP+ GWI DL+ DP I PI Sbjct: 466 QMPVFLSLYWVLLESVEMRQAPWLGWITDLSVKDPFFIL-------------------PI 506 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 +M +M IQ ++P P D QA ++ MP++F F FPAGL++YW +N +SI QQ Sbjct: 507 VMGGTMLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWY 566 Query: 556 IMKMHGA 562 I + A Sbjct: 567 ITRKIEA 573 >gi|293391845|ref|ZP_06636179.1| putative inner membrane protein translocase component YidC [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952379|gb|EFE02498.1| putative inner membrane protein translocase component YidC [Aggregatibacter actinomycetemcomitans D7S-1] Length = 536 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 153/573 (26%), Positives = 267/573 (46%), Gaps = 45/573 (7%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 + +S I+ WQ Y P+ + V + V N+ A + Sbjct: 2 VIALLFMSFIVYQQWQLDYHTPKPVTTEQTAASASDVPASSNVGNAVIATDTQ------A 55 Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 + L+N IN G L Y ++ SN+P + L + ++ Y A+ Sbjct: 56 KGKIITLENDVFRLKINTLGGDVVSSELLKYDAELDSNTPFMLL--QNTPQHVYIAQSGL 113 Query: 127 VSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFERTISLDEH-YLFK 181 + N I+ + + + LV+ + + + + +L Y Sbjct: 114 IG-KNGIDTKSGRADYQADGDNFKLADGQNELSVPLVYV-KDGVTYRKVFTLKRGEYNIA 171 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + + N S I P G++ +++ N G + + + +SD+E + Sbjct: 172 VNYEINNQSDKTIEVEPYGQLRHTLVESSGNVAMPTYTGGAYSSSETNYKKYSFSDMENA 231 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 ++S + W+ + Y+ S +IP+++ + + + + +I P Sbjct: 232 NLS-INTKAGWVAVLQHYFVSAWIPNQDADNQ-LYTLIDKANNIGSIGYRGPVTSIQPNT 289 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + T T+ L+ G K + ++ +D+GW +FIAKP+F L+++ LV N+ Sbjct: 290 TETLTSKLWTGPKLQNEMAQVAN-----HLDLTVDYGWAWFIAKPLFRLLTFIQKLVHNW 344 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F + Q + + M++LYK Sbjct: 345 GVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERFGED-RQRMSQEMMKLYK 403 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NPL GC P+LLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP I Sbjct: 404 DEKVNPLGGCLPLLLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYYIL------ 457 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539 PI+M SMF+ KMSP P AD Q ++ +MP++F+ FPAGL+ Sbjct: 458 -------------PILMGGSMFLLQKMSPTPVADPIQQKVMTFMPLIFMVFFLWFPAGLV 504 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 +YW SN+I+I+QQ +I + + GL R + Sbjct: 505 LYWLVSNLITIIQQQLIYR-GLEKKGLHTRHKK 536 >gi|167626216|ref|YP_001676510.1| 60 kDa inner membrane insertion protein [Shewanella halifaxensis HAW-EB4] gi|189036362|sp|B0TQH1|OXAA_SHEHH RecName: Full=Inner membrane protein oxaA gi|167356238|gb|ABZ78851.1| 60 kDa inner membrane insertion protein [Shewanella halifaxensis HAW-EB4] Length = 544 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 141/570 (24%), Positives = 249/570 (43%), Gaps = 48/570 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N + I L + WQ + P+ + +I + + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADQAPQPVAAAQTQSSIPASTVADSHSSDVPDADS 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + L I+ G L + L+ + + P V L ++ Sbjct: 60 AVPEAITASKELITVFTDQLEIKIDPVGGDIVYSALLSHKLEENGDDPFVLLEQTNDIY- 118 Query: 119 AYFAELDYVSTAN-------NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 Y A+ + +++ + L G+ T + L + + + + ++ Sbjct: 119 -YIAQSGLIGRDGIDSSVKGRAHFDSASREYKLADGQ---DTLSVPLTYVSDKGVTYTKS 174 Query: 172 ISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSL 229 Y + + N S ++ G+I K ++ G D Sbjct: 175 FVFTRGKYNIAVDYKINNTSDASLQVQMYGQIKHSIKKSESSMMMPTYLGGAFSTDDIRY 234 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + + D+ ++ + W+ + Y+ S ++P T + F + +G A F Sbjct: 235 EKYSFDDMADKNLDD-STLGGWVAMLQHYFVSAWVPPA-TEKNIIFSSMKNGLAN--IGF 290 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 I PG + + G K+ + P +++D+G+ +++A P++ L Sbjct: 291 RGELHDIAPGSEQVIKSEFYVGPKDQKALSVLS-----PSLNLVVDYGFLWWLAVPIYKL 345 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + +F+++VGN+G AI+L T+ V+ L +PL K QY S A M+N+QPK+ EL+E+F Q Sbjct: 346 LMFFHSIVGNWGFAIILITLTVRGLLYPLTKAQYTSMAKMRNLQPKLAELKERFGDD-RQ 404 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI DL+ D Sbjct: 405 KMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQD 464 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVF 527 P + PI+M +SMF+ KM P P D Q ++ WMPV+F Sbjct: 465 PYYVL-------------------PILMGISMFVMQKMQPMAPTMDPMQVKMMQWMPVIF 505 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 506 TVFFLWFPAGLVLYWLVGNLVAITQQKIIY 535 >gi|307261914|ref|ZP_07543574.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868385|gb|EFN00202.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 533 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 148/561 (26%), Positives = 268/561 (47%), Gaps = 44/561 (7%) Query: 10 AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSP 69 + +S +I WQ + E ++ Q D A+ A+ + Sbjct: 3 LLLVSFLIFTQWQQDFN---PEIQAQKQAQQQAQVASQSGDVPAASNANTVIAENATQGK 59 Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST 129 V L++ L +I+ G +L ++ +++S +P L + + T Y A+ V Sbjct: 60 TVTLQSDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATT---YVAQSGLVG- 115 Query: 130 ANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVD 184 N I+ + + + + + F+ + +L+ +T L Y + Sbjct: 116 KNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFE-KDGVLYTKTFVLKRGSYDVAVNF 174 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 V N + + P G+I +++ + T G + + + + D+EK+++ Sbjct: 175 NVKNQTAATVEVQPYGQIKYTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDMEKANL- 233 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + + W+ + Y+ S ++P+++ + + + TI P T Sbjct: 234 DINTKAGWVALLQHYFVSAWVPNQDAENTIYSRT---NNGIATIGYRGPVTTIAPNSEAT 290 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G K+ + +L ++ +D+GW +FIAKP+F L+++ ++V N+G+A Sbjct: 291 ITSQLWTGPKDQKEMEATAANL-----DLTVDYGWAWFIAKPLFALLTFIQSIVTNWGLA 345 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPKI E+RE+F Q + + M++LYK Sbjct: 346 IIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGDD-RQRMSQEMMKLYKEEK 404 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP I Sbjct: 405 VNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIL--------- 455 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P++M SMF+ KMSP P D Q ++ +MPV+F FP+GL++YW Sbjct: 456 ----------PLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSGLVLYW 505 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 SN+I+IVQQ +I + + Sbjct: 506 LTSNIITIVQQWLIYRNLEKK 526 >gi|161610372|ref|NP_886531.2| putative inner membrane protein translocase component YidC [Bordetella parapertussis 12822] gi|38502926|sp|Q7W2K1|OXAA_BORPA RecName: Full=Inner membrane protein oxaA Length = 563 Score = 461 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 153/577 (26%), Positives = 256/577 (44%), Gaps = 52/577 (9%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYP-RIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 + + S ++ W N+ ++ + +QP N AA Sbjct: 4 RRTVLWMIFSFSLLLLWNNWQIHNGKPSLFGGPAPEAAATQQPKADANGTAASSTASIPS 63 Query: 64 ALSMS-----------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + + + +V + L + + GAQ L Y S+ P Sbjct: 64 SPAAAPAAASVPGAAAPAAAKSEQVVITTDVLRLTFDSNGAQLIRAELLKYPSSSQSDKP 123 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NN 165 V + + Y A+ V P T ++L+S + + +VF+ Sbjct: 124 TVLM--DRSADLVYVAQTGVVGAPQGESFPTHQTPFHLVSSERSLTGDTLDVVFEAESGG 181 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIA 222 + +T +L Y + + N + + ++ R P ++ + G Sbjct: 182 LKVTKTYTLHRGRYDVDVRHAMANTGGAPLSPALYLQLERDGTDPAGTSSFYHTFTGVAV 241 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 + +SDIEK + ++ N W+GI Y+A+ +IP++ ++ L Sbjct: 242 YSEQDKFQKVTFSDIEKKKGTYIKQADNGWIGIVQHYFATAWIPAQGKQRTNEL--LQVQ 299 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 Y A+ TI PG S L+ G ++ + P E+++D+GW Sbjct: 300 QNLYAARTIEAVGTIAPGSSANVDAHLWVGPQDQKAMAAV-----APGLELVVDYGWLTI 354 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+F LM++ + L+GN+G I+ TV +K +FFPLA Y S A MK + P++ L+E Sbjct: 355 IAKPLFTLMTWLHGLLGNWGWTIVALTVIIKAVFFPLAAASYRSMARMKQVAPRLQALKE 414 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ Q L +AM+++Y+T INPL GC P+++QIPVF A+Y V+ S+EMR AP+ W Sbjct: 415 KYGDD-RQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAPWILW 473 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + DL+ DP I P IM +MF+Q+K++P P D QA ++ Sbjct: 474 VHDLSVRDPFFIL-------------------PAIMMATMFLQIKLNPTPPDPVQAKVMM 514 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MP+VF + FPAGL++YW +N +SI QQ I + Sbjct: 515 IMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWTITR 551 >gi|238759578|ref|ZP_04620740.1| Inner membrane protein oxaA [Yersinia aldovae ATCC 35236] gi|238702237|gb|EEP94792.1| Inner membrane protein oxaA [Yersinia aldovae ATCC 35236] Length = 531 Score = 461 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 147/575 (25%), Positives = 251/575 (43%), Gaps = 63/575 (10%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AWQ + Q N+ + +K Sbjct: 1 MIWQAWQVD------------NSPQPAAQTTQQTANTATGDKASQAVPGSGQGQLITVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN---- 131 L +IN +G + NL Y + S+ L + Y A+ + Sbjct: 49 DVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFVYQAQSGLTGKSGPDNP 106 Query: 132 -NIELP---NSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTV 186 N E P T + L G+ I L F + +F +T L + Y + V Sbjct: 107 ANGERPLFETPQTSFVLADGQ---DELRIPLTFTGKDGSVFIKTFVLKRNDYAIGVDYHV 163 Query: 187 TNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG--DKSLVEQKYSDIEK 239 N S + + G++ + T +N F + A + + +SDIE Sbjct: 164 KNASAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDETKYKKYSFSDIED 223 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 S+ + W+ + +Y+A+ +IP+ + F G+ F + I PG Sbjct: 224 KSL-DITTKGGWVAMLQQYFATAWIPTANE--TNTFYSADLGNGLAAIGFKGAPVVIQPG 280 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 ++ L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN Sbjct: 281 EAKQLGATLWVGPEIQDKMAAI-----APHLDLTVDYGWLWFISQPLFKLLKFIHSFVGN 335 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + + M+ LY Sbjct: 336 WGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMSQEMMALY 394 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP I Sbjct: 395 KAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYYIL----- 449 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538 PI+M ++M+ KMSP D Q I+ +MPV+F FPAGL Sbjct: 450 --------------PILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGL 495 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++Y+ SN+++I+QQ +I + + GL R + Sbjct: 496 VLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 529 >gi|33591704|ref|NP_879348.1| putative inner membrane protein translocase component YidC [Bordetella pertussis Tohama I] gi|161609254|ref|NP_891527.2| putative inner membrane protein translocase component YidC [Bordetella bronchiseptica RB50] gi|54038802|sp|P65623|OXAA_BORBR RecName: Full=Inner membrane protein oxaA gi|54041691|sp|P65622|OXAA_BORPE RecName: Full=Inner membrane protein oxaA gi|33571347|emb|CAE44824.1| probable inner-membrane protein [Bordetella pertussis Tohama I] gi|332381123|gb|AEE65970.1| putative inner membrane protein translocase component YidC [Bordetella pertussis CS] Length = 563 Score = 461 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 153/577 (26%), Positives = 256/577 (44%), Gaps = 52/577 (9%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYP-RIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 + + S ++ W N+ ++ + +QP N AA Sbjct: 4 RRTVLWMIFSFSLLLLWNNWQIHNGKPSLFGGPAPEAAATQQPKADANGTAASSTASIPS 63 Query: 64 ALSMS-----------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + + + +V + L + + GAQ L Y S+ P Sbjct: 64 SPAAAPAAASVPGAAAPAAAKSEQVVITTDVLRLTFDSNGAQLIRAELLKYPSSSQSDKP 123 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NN 165 V + + Y A+ V P T ++L+S + + +VF+ Sbjct: 124 TVLM--DRSADLVYVAQTGVVGAPQGESFPTHQTPFHLVSSERSLTGDTLDVVFEAESGG 181 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIA 222 + +T +L Y + + N + + ++ R P ++ + G Sbjct: 182 LKVTKTYTLHRGRYDVDVRHAMANTGGAPLNPALYLQLERDGTDPAGTSSFYHTFTGVAV 241 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 + +SDIEK + ++ N W+GI Y+A+ +IP++ ++ L Sbjct: 242 YSEQDKFQKVTFSDIEKKKGTYIKQADNGWIGIVQHYFATAWIPAQGKQRTNEL--LQVQ 299 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 Y A+ TI PG S L+ G ++ + P E+++D+GW Sbjct: 300 QNLYAARTIEAVGTIAPGSSANVDAHLWVGPQDQKAMAAV-----APGLELVVDYGWLTI 354 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+F LM++ + L+GN+G I+ TV +K +FFPLA Y S A MK + P++ L+E Sbjct: 355 IAKPLFTLMTWLHGLLGNWGWTIVALTVIIKAVFFPLAAASYRSMARMKQVAPRLQALKE 414 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ Q L +AM+++Y+T INPL GC P+++QIPVF A+Y V+ S+EMR AP+ W Sbjct: 415 KYGDD-RQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAPWILW 473 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + DL+ DP I P IM +MF+Q+K++P P D QA ++ Sbjct: 474 VHDLSVRDPFFIL-------------------PAIMMATMFLQIKLNPTPPDPVQAKVMM 514 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MP+VF + FPAGL++YW +N +SI QQ I + Sbjct: 515 IMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWTITR 551 >gi|148550509|ref|YP_001270611.1| putative inner membrane protein translocase component YidC [Pseudomonas putida F1] gi|166977400|sp|A5WBB7|OXAA_PSEP1 RecName: Full=Inner membrane protein oxaA gi|148514567|gb|ABQ81427.1| protein translocase subunit yidC [Pseudomonas putida F1] Length = 560 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 150/583 (25%), Positives = 252/583 (43%), Gaps = 51/583 (8%) Query: 1 MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV----------KQPNQ 48 M+ +A +S ++V W + Y + N + Sbjct: 1 MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASAD 60 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPI 107 V ++ A + A + +K L +I+ G LNL Y N P Sbjct: 61 VPSANAESSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPNIPF 120 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NAN 164 L + + Y A+ T + ++ +LV + N Sbjct: 121 Q--LFDNGGERVYLAQSGLTGTDGPDARASGRPLYAAEQKSYQLADGQEQLVVDLKFSDN 178 Query: 165 NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE----G 219 + + + S Y + + N S + ++ R +++ G Sbjct: 179 GVNYIKRFSFKRGEYDLNVSYLIDNQSGQAWSGNMFAQLKRDASGDPSSSTATGTATYLG 238 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + + DI+K S+ + S W+ Y+ + +IP+K + Q + Sbjct: 239 AALWTASEPYKKVSMKDIDKGSLKE-NVSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--K 295 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 D Y ++ I++ G + T+ L+AG K + P E+ +D+G+ Sbjct: 296 DSQGNYIIGYTGPVISVPAGGKVETSALLYAGPKIQSKLKELS-----PGLELTVDYGFL 350 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L Sbjct: 351 WFIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAAL 410 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E+F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ Sbjct: 411 KERFGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWI 469 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+ DP I PIIM +MFIQ +++P P D QA + Sbjct: 470 LWITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKV 510 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 511 MKMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEA 553 >gi|26986751|ref|NP_742176.1| putative inner membrane protein translocase component YidC [Pseudomonas putida KT2440] gi|60392875|sp|P0A140|OXAA_PSEPK RecName: Full=Inner membrane protein oxaA gi|60392876|sp|P0A141|OXAA_PSEPU RecName: Full=Inner membrane protein oxaA gi|24981341|gb|AAN65640.1|AE016190_6 inner membrane protein, 60 kDa [Pseudomonas putida KT2440] gi|45709|emb|CAA44417.1| unnamed protein product [Pseudomonas putida] gi|313496415|gb|ADR57781.1| OxaA [Pseudomonas putida BIRD-1] Length = 560 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 150/583 (25%), Positives = 252/583 (43%), Gaps = 51/583 (8%) Query: 1 MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV----------KQPNQ 48 M+ +A +S ++V W + Y + N + Sbjct: 1 MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASAD 60 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPI 107 V ++ A + A + +K L +I+ G LNL Y N P Sbjct: 61 VPSANAESSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPNIPF 120 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NAN 164 L + + Y A+ T + ++ +LV + N Sbjct: 121 Q--LFDNGGERVYLAQSGLTGTDGPDARASGRPLYAAEQKSYQLADGQEQLVVDLKFSDN 178 Query: 165 NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE----G 219 + + + S Y + + N S + ++ R +++ G Sbjct: 179 GVNYIKRFSFKRGEYDLNVSYLIDNQSGQAWNGNMFAQLKRDASGDPSSSTATGTATYLG 238 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + + DI+K S+ + S W+ Y+ + +IP+K + Q + Sbjct: 239 AALWTASEPYKKVSMKDIDKGSLKE-NVSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--K 295 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 D Y ++ I++ G + T+ L+AG K + P E+ +D+G+ Sbjct: 296 DSQGNYIIGYTGPVISVPAGGKVETSALLYAGPKIQSKLKELS-----PGLELTVDYGFL 350 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L Sbjct: 351 WFIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAAL 410 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E+F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ Sbjct: 411 KERFGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWI 469 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+ DP I PIIM +MFIQ +++P P D QA + Sbjct: 470 LWITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKV 510 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 511 MKMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEA 553 >gi|217970730|ref|YP_002355964.1| hypothetical protein Tmz1t_2331 [Thauera sp. MZ1T] gi|217508057|gb|ACK55068.1| 60 kDa inner membrane insertion protein [Thauera sp. MZ1T] Length = 552 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 152/574 (26%), Positives = 259/574 (45%), Gaps = 48/574 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFY------VYPRIEEMNNERKNIQTVKQPNQVDNSYA 54 M++ + + S +V W + V + + V P Sbjct: 1 MDQ-RRLILFLIFSFSLVMLWDGWIKQNQPPVAQQQAAAGSAAPADGAVPTPTLSATPGQ 59 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 V+ ++A + +PR ++ L ++ +G L L+ + + V LL Sbjct: 60 PVVPGEQAAQAAAAPRAVVETDLLRAEVSAQGGDIVRLELKQHKASGEAGGNFV-LLDDG 118 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT----PTTPIKLVFKNANNILFER 170 T++ Y A+ + LP T++ L +G++ ++L N + + Sbjct: 119 TTRHQYAAQSGLIGEG----LPTHKTLFQLPAGELRLKDGENGVELRLQAPEQNGVQVTK 174 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGV--QEGFIAVLGD 226 + YL + + N S + ++ R P FGV G Sbjct: 175 VMRFARGSYLIDVSYEIRNGSGQALAPHAYFQLTRDGNPAEQVEAFGVTTFTGPAFYTDA 234 Query: 227 KSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + +++DI + + W+ + Y+ ++P + L G+ + Sbjct: 235 NKFQKVQFADITDGDAKFPKTAADGWVAMVQHYFVGAWLPKAGEQREYFARAL--GNNLF 292 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 A +I G + L+AG +E + P ++++D+GW IA P Sbjct: 293 SAGVILPVASIATGAEGAVSTRLYAGPQEQDKLEGI-----APGLDLVVDYGWLTVIAAP 347 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F ++S+F+NL GN+G AI+L TV +K +FFPL+ Y S A M+ + P++ ++E + Sbjct: 348 LFWVLSWFHNLTGNWGWAIILVTVAIKAIFFPLSAASYKSMAKMRVLGPRLQRMKEMYGN 407 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + +Q+ M+ LY+T INPL GC PIL+QIPVF A+Y V+ S+EMRHAP+ GWI+DL Sbjct: 408 DKAK-MQQEMMNLYRTEKINPLGGCLPILVQIPVFIALYWVLLGSVEMRHAPWLGWIQDL 466 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 +A DP I PIIM +SM +QMK++P P D QA ++ MP+ Sbjct: 467 SAKDPYFIL-------------------PIIMGVSMLVQMKLNPTPPDPIQAKVMMAMPI 507 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +F F FP+GL++YW +N +SI QQ I +M Sbjct: 508 IFTFMFLWFPSGLVLYWVVNNCLSIAQQWQITRM 541 >gi|226942148|ref|YP_002797222.1| inner membrane protein translocase component YidC [Laribacter hongkongensis HLHK9] gi|254772999|sp|C1D6H8|OXAA_LARHH RecName: Full=Inner membrane protein oxaA gi|226717075|gb|ACO76213.1| YidC [Laribacter hongkongensis HLHK9] Length = 550 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 142/581 (24%), Positives = 241/581 (41%), Gaps = 52/581 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ V I LS +++ WQ ++ + K + QP+ A D Sbjct: 1 MD-TKRLIVFIVLSFGLLFVWQEYFAP------KPQPKPVAAAVQPDGTPAPATARPADS 53 Query: 61 RAQ-ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A L+ + + + + IN G L L + + P + + Sbjct: 54 PATGKLTSAQTITVTTDLVKAQINTAGGDIRSLELLTQGAIDNPDKPFMLMTEQGG--RT 111 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD 175 Y A+ +S+ + LP T++ T + L N + ++ + Sbjct: 112 YVAQSGLLSS--DASLPTHKTLYAADKTAYTLLPDQNTLTVTLAAAPVNGVEVKKIFTFK 169 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQ 232 + Y+ + + N+S + + R++R P+ ++ G + Sbjct: 170 RDSYVIDVRYDIINHSDKPVDATAYYRLLRDGKAPEGESSMAHTFTGPAVYTETGKFQKV 229 Query: 233 KYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHS-------QFKYLSDGHAR 284 + D+ K N W+ + Y+ S +I QF+ Sbjct: 230 SFEDLAKGKGDYVRQADNGWVAMVQHYFVSAWILKTNDGKSVCSSAEACQFELKPAAGDL 289 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A + G+ + L+AG ++ + P + D+GW IA Sbjct: 290 YSAGVLVKLPVVAAGQQYSIDMPLYAGPEDTRRMATV-----APGLVLTKDYGWVTIIAT 344 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ Y LV N+G AI+L TV VK F+PL+ Y S A MK + P++ L+E++ Sbjct: 345 PLFWLLDKLYGLVHNWGWAIVLLTVLVKAAFYPLSAASYRSMAKMKALAPRMQRLKEQYG 404 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q Q+A +++YKT +NPL GC PI++QIPVF +Y + S+E+R AP+ WI D Sbjct: 405 DD-RQKFQQATMEMYKTEKVNPLGGCLPIVVQIPVFIGLYWALLASVELRQAPWILWIHD 463 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 LA DP I P +M+ +M++Q ++PPPAD QA ++ MP Sbjct: 464 LAKPDPYYIL-------------------PALMAATMYLQTFLNPPPADPLQAKMMKIMP 504 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + F FPAGL++YW +N++SI QQ + K + Sbjct: 505 LAFSVMFFFFPAGLVLYWLVNNILSIAQQWWVNKQIEKDAA 545 >gi|157964068|ref|YP_001504102.1| 60 kDa inner membrane insertion protein [Shewanella pealeana ATCC 700345] gi|189036363|sp|A8HAI0|OXAA_SHEPA RecName: Full=Inner membrane protein oxaA gi|157849068|gb|ABV89567.1| 60 kDa inner membrane insertion protein [Shewanella pealeana ATCC 700345] Length = 545 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 140/570 (24%), Positives = 243/570 (42%), Gaps = 47/570 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N + I L + WQ + P+ + +I + + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPQPVAAAQTQSSIPASTVADAHSSDVPDADS 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + L I+ G L + L+ + P V L ++ Sbjct: 60 AVPEATPASKELITVITDQLEIKIDPVGGDIVYSALLSHKLEEKGDDPFVLLEQTNDIY- 118 Query: 119 AYFAELDYVSTAN-------NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 Y A+ + +++ + L G+ T + L + + + + + Sbjct: 119 -YIAQSGLIGRDGIDSSVKGRAHFDSASREYKLADGQE---TLNVPLTYVSDKGVAYTKV 174 Query: 172 ISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSL 229 Y + + N S Q++ G+I K ++ G D Sbjct: 175 FVFTRGKYNIAVDYKINNTSDAQLQVQMYGQIKHSIKKSESSMMMPTYRGGAFSTADTRY 234 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + + D+ ++ W+ + Y+ S ++P + G A F Sbjct: 235 EKYSFDDMADKNLDK-STLGGWVAMLQHYFVSAWVPPANDKNIIFSSVSAGGLAN--IGF 291 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 I PG + + G K+ + P +++D+G+ +++A P++ L Sbjct: 292 RGALYDIAPGTEQSIKAEFYVGPKDQEALSALS-----PSLNLVVDYGFLWWLAVPIYKL 346 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + +F ++VGN+GIAI+L T+ V+ + +PL K QY S A M+N+QPK+ EL+E+F Q Sbjct: 347 LMFFQSIVGNWGIAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLAELKERFGDD-RQ 405 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI DL+ D Sbjct: 406 KMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQD 465 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVF 527 P + PI+M +SMF+ KM P P D Q ++ WMPV+F Sbjct: 466 PYYV-------------------MPILMGISMFVMQKMQPMAPTMDPMQVKMMQWMPVIF 506 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 507 TVFFLWFPAGLVLYWLVGNLVAITQQKIIY 536 >gi|238793138|ref|ZP_04636766.1| Inner membrane protein oxaA [Yersinia intermedia ATCC 29909] gi|238727511|gb|EEQ19037.1| Inner membrane protein oxaA [Yersinia intermedia ATCC 29909] Length = 529 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 145/575 (25%), Positives = 247/575 (42%), Gaps = 63/575 (10%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AWQ + Q N+ + +K Sbjct: 1 MIWQAWQVD------------NSPQPAAQTTQQTANTATGDKASQAVPGSGQGQLITVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 L +IN +G + NL Y + S+ L + Y A+ + Sbjct: 49 DVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFVYQAQSGLTGKSGPDNP 106 Query: 136 PN--------SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTV 186 N T + L G+ I L F + +F +T L + Y + V Sbjct: 107 ANGERPLFEAPQTSFVLADGQ---DELRIPLTFTGKDGSVFTKTFVLKRNDYAIGVDYHV 163 Query: 187 TNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG--DKSLVEQKYSDIEK 239 N S + + G++ + T +N F + A D + +SDIE Sbjct: 164 KNASAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDDTKYKKYSFSDIED 223 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 ++ + W+ + +Y+A+ +IP + F G+ F + I PG Sbjct: 224 KNM-DITTKGGWVAMLQQYFATAWIPVANE--TNTFYSSDLGNGLAAIGFKGAPVIIQPG 280 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN Sbjct: 281 EQKQLGATLWVGPEIQDKMAVI-----APHLDLTVDYGWLWFISQPLFKLLKFIHSFVGN 335 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + + M+ LY Sbjct: 336 WGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMSQEMMALY 394 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP I Sbjct: 395 KAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYYIL----- 449 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538 PI+M ++M+ KMSP D Q I+ +MPV+F FPAGL Sbjct: 450 --------------PILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGL 495 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++Y+ SN+++I+QQ +I + + GL R + Sbjct: 496 VLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 529 >gi|300692995|ref|YP_003753990.1| cytoplasmic insertase, essential for proper integration of ATPase into the membrane [Ralstonia solanacearum PSI07] gi|299080055|emb|CBJ52730.1| cytoplasmic insertase, essential for proper integration of ATPase into the membrane [Ralstonia solanacearum PSI07] Length = 554 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 156/577 (27%), Positives = 250/577 (43%), Gaps = 55/577 (9%) Query: 5 WNYFVAIALSVIIVYA---WQN-------FYVYPRIEEMNNERKNIQTV-----KQPNQV 49 + + S+ +V WQ F+ P+ + Sbjct: 4 KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTATTSAAAPGGTPAGDVPKSAAAPA 63 Query: 50 DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 A A + ++ + + +++ GA L L + V Sbjct: 64 AAGSQAAPATGAASQTPAAEKIVVTTDVIRATVDTAGAILTKLELLTQK---DHDGNPVV 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG-KILTPTTPIKLVFK-NANNIL 167 L S + Y A + + PN TV+ +G + L + L + Sbjct: 121 LFDRS-LERTYLARSGLIGG----DFPNHTTVFTASAGPRDLGTGGEVSLTLTADKGGAK 175 Query: 168 FERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLG 225 +T Y+ VTN+ I + + R + + G Sbjct: 176 LAKTYVFKRGSYVIDTRFDVTNDGTAPISPTLYMELARDGGSVEQSRFYSTFTGPAVYTD 235 Query: 226 DKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 + +SDI+K + N W+G+ Y+AS +IP+ + Sbjct: 236 ADKFHKINFSDIDKGKAHVPAATDNGWVGMVQHYFASAWIPAASAKREFYVDRVDTN--F 293 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y+ T+ PG +I+ T LFAG +E + P E++ D+GW IAK Sbjct: 294 YRIGIQEPLGTVAPGANISATARLFAGPQEERMLEGIT-----PGLELVKDYGWLTIIAK 348 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + L+GN+G +I+ TV VKL+FFPL+ Y S A MK++QP++ +RE+ K Sbjct: 349 PLFWLLEKIHLLLGNWGWSIVGLTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHK 408 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 P Q + + M+QLY+T +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ GW+ D Sbjct: 409 GDP-QKMNQEMMQLYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWVHD 467 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 LA+ DP I PI+M++SMF+Q +++P P D QA ++ +MP Sbjct: 468 LASPDPFYIL-------------------PILMAVSMFVQTRLNPTPPDPVQAKMMMFMP 508 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + F FPAGL++YW +N +SI QQ I +M G Sbjct: 509 IAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 545 >gi|315634811|ref|ZP_07890093.1| YidC/Oxa1 family membrane protein insertase [Aggregatibacter segnis ATCC 33393] gi|315476363|gb|EFU67113.1| YidC/Oxa1 family membrane protein insertase [Aggregatibacter segnis ATCC 33393] Length = 542 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 158/584 (27%), Positives = 268/584 (45%), Gaps = 54/584 (9%) Query: 1 MERNW--NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + +S I+ WQ Y P+ + E+ T P N+ Sbjct: 1 MDSRRGLLVIALLFMSFIVYQQWQLDYHTPKP--VATEQTVTSTSDVPASSGNNTVIA-- 56 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + L+N IN G L Y ++ SN P V L + ++ Sbjct: 57 ---TDTQVKGKVITLENDVFRLKINTLGGDVISSELLKYDAELDSNMPFVLL--QNTPEH 111 Query: 119 AYFAELDYVST------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ + A + + L G+ + LV++ + + + Sbjct: 112 VYIAQSGLIGKDGIDTKAGRADYQVEGENFKLADGQ---NELIVPLVYQ-KEGVTYRKIF 167 Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT--FGVQEGFIAVLGDKSL 229 L Y + ++N S I P G++ RH ++ + G + + Sbjct: 168 VLKRGEYDIAVNYEISNQSDKTIEVEPYGQL-RHTLVDSSGSVAMPTYTGGAYSSSETNY 226 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + +SD+E +++S + W+ + Y+ S +IP+++ + + + Sbjct: 227 KKYSFSDMENANLS-VNTKAGWVAVLQHYFVSAWIPNQDADNQ-LYTLTDKANNIGSIGY 284 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + I P + T+ L+ G K + ++ +D+GW +FIAKP+F L Sbjct: 285 RGPVVAIQPNTTEKLTSKLWTGPKLQNEMAQVAD-----HLDLTVDYGWAWFIAKPLFWL 339 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +++ LV N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F + Q Sbjct: 340 LTFIQQLVHNWGVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERFGED-RQ 398 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M++LYK +NPL GC P+LLQ+P+F A+Y ++E+RHAPF+GWI+DL+A D Sbjct: 399 RMSQEMMKLYKDEKVNPLGGCLPLLLQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQD 458 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I PI+M SMF+ KMSP P AD Q I+N+MP++F+ Sbjct: 459 PYYIL-------------------PILMGASMFLLQKMSPTPVADPMQQKIMNFMPLIFM 499 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 FPAGL++YW SN+I+I+QQ +I + + GL R + Sbjct: 500 VFFLWFPAGLVLYWLVSNLITIIQQQLIYR-GLEKKGLHTRHKK 542 >gi|121730052|ref|ZP_01682461.1| inner membrane protein, 60 kDa [Vibrio cholerae V52] gi|121628201|gb|EAX60724.1| inner membrane protein, 60 kDa [Vibrio cholerae V52] Length = 510 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 144/537 (26%), Positives = 243/537 (45%), Gaps = 46/537 (8%) Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSM-----SPRVELKNPSLIGSINLKGAQFDDLNLR 95 Q +Q + A D+ + + + + L SI+ G L Sbjct: 1 QATQQAQSTGAAPAPSFSDELDPTPAQNVAAKAKTITVSTDVLTLSIDTLGGDVVSAKLN 60 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT---- 151 Y +++S V L + + + A+ V I++ ++N +S T Sbjct: 61 QYSEELNSPESFVLLQNTQG--HQFIAQSGLVGPQG-IDVTSNNRPAYQVSADSFTLAEG 117 Query: 152 -PTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209 I + ++ AN I + +T L Y +V V NNS + + ++ + Sbjct: 118 QDELRIPMTYQ-ANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDS 176 Query: 210 ATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSK 267 N G D + + D++ ++S ++ + +W+ + Y+AS +IP Sbjct: 177 GGNLAMPTYRGGAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRD 236 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 E + +++ TI G L+ G K + Sbjct: 237 EPQAQLYSRVINNLGD---MGIRTPNKTIANGDKAEFEATLWVGPKLQDQMAA-----TA 288 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P ++++D+GW +FIAKP+ L+S VGN+G+AI+ T V+ +PL K QY S A Sbjct: 289 PNLDLVVDYGWLWFIAKPLHWLLSVIQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMA 348 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ +QPK+ +RE+ Q + + M++LYK +NPL GC PILLQ+P+F A+Y + Sbjct: 349 KMRMLQPKLQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL 407 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+E+RH+PF+GWI DL+A DP I P++M SMF+ KM Sbjct: 408 MESVELRHSPFFGWIHDLSAQDPYYIL-------------------PLLMGASMFVIQKM 448 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 SP D Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K + Sbjct: 449 SPTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 505 >gi|308051501|ref|YP_003915067.1| protein translocase subunit yidC [Ferrimonas balearica DSM 9799] gi|307633691|gb|ADN77993.1| protein translocase subunit yidC [Ferrimonas balearica DSM 9799] Length = 539 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 140/568 (24%), Positives = 251/568 (44%), Gaps = 47/568 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + I L + WQ + + + + + T + N V S A Sbjct: 1 MDSQRNLIL-IGLLFVSFLLWQQWTLDQAPQAETPAAQTVATADKANDVPQSAAKSAAPA 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A ++++ +L +I+ G L + ++ + + L + + Y Sbjct: 60 GATISDR--LIQVQTDTLKLTIDATGGDVVYAALPEHKVEQGGDEALTILENENGF--TY 115 Query: 121 FAELDYVS------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 A+ + + + L G+ T + L+F +AN + FE+ + Sbjct: 116 IAQSGLIGLNGPHASGQRPVYQAQAANYTLQDGQ---DTLVVPLIFTDANGVKFEKRYTF 172 Query: 175 DE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQ 232 HY ++ V N S I+ ++ + + G D + Sbjct: 173 TRGHYDVRVDYLVHNTSDAAIQVQMYSQLKQSIGKSEGSMMMPTYRGGAYSTADTRYEKY 232 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + +EK++++ W+ + Y+ S ++PS +++ +S Sbjct: 233 AFDKMEKNNLAE-ATQGGWIAMLQHYFVSAWVPSADSTNDIYSNVVS---GDAIIGVKQP 288 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + I PG T L+ G K + P +++D+GW +FIA+P+ L+ + Sbjct: 289 AVQIAPGAEQTLGATLYVGPKNQEALSALS-----PTLNLVVDYGWLWFIAQPLHSLLMF 343 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +LV N+G+AI+L T+ ++ +PL K QY S A M+ +QPK+ +L+E+F Q + Sbjct: 344 LQSLVSNWGVAIILMTLIIRGFMYPLTKAQYTSMAKMRKLQPKLADLKERFGDD-RQRMS 402 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 +AM++LY+ +NP+ GC P+LLQ P+F A Y V+ S+E+RHAPF+GWI DL+ DP Sbjct: 403 QAMMELYQKEKVNPMGGCLPLLLQFPIFIAFYWVLLESVELRHAPFFGWITDLSVKDPYY 462 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWMPVVFVFA 530 + P++M +SMF KM P D Q I+ +MPV+F Sbjct: 463 VL-------------------PVLMGISMFAMQKMQPTMATMDPMQQKIMQYMPVMFTVF 503 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++YW N+++I QQ I + Sbjct: 504 FLWFPSGLVLYWLVGNLVAIAQQLFIYR 531 >gi|238750292|ref|ZP_04611794.1| Inner membrane protein oxaA [Yersinia rohdei ATCC 43380] gi|238711525|gb|EEQ03741.1| Inner membrane protein oxaA [Yersinia rohdei ATCC 43380] Length = 531 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 145/575 (25%), Positives = 251/575 (43%), Gaps = 63/575 (10%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AWQ + + N T + +Q + +K Sbjct: 1 MIWQAWQVDNNPQPAAQTTQQTANTATGDKASQA------------VPGSGQGQLITVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 L +IN +G D NL Y + S+ L + Y A+ Sbjct: 49 DVLSLTINTRGGDIDQANLLAYPDALGSDKTFELL--ETTPGFIYQAQSGLTGKNGPDNP 106 Query: 136 PN--------SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTV 186 N T + L G+ I + F + +F +T L + Y + V Sbjct: 107 ANGERPLFEVPQTSFVLADGQ---DELRIPMTFTGKDGSVFIKTFVLKRNDYAIGVDYHV 163 Query: 187 TNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG--DKSLVEQKYSDIEK 239 N S + + G++ + T +N F + A + + +SDIE Sbjct: 164 KNASEAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAFSSDETKYKKYSFSDIED 223 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 ++ + W+ + +Y+A+ +IP+ + F G+ F + I PG Sbjct: 224 KNL-DITTKGGWVAMLQQYFATAWIPTANE--TNTFYSADLGNGLAAIGFKGAPVVIQPG 280 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN Sbjct: 281 EQKQLSATLWVGPEIQDKMAAI-----APHLDLTVDYGWLWFISQPLFKLLKFIHSFVGN 335 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + + M+ LY Sbjct: 336 WGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMSQEMMALY 394 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP I Sbjct: 395 KAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFIWWIHDLSAQDPYYIL----- 449 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538 PI+M ++M+ KMSP D Q I+ +MPV+F FPAGL Sbjct: 450 --------------PILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGL 495 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++Y+ SN+++I+QQ +I + + GL R + Sbjct: 496 VLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 529 >gi|71909810|ref|YP_287397.1| protein translocase subunit yidC [Dechloromonas aromatica RCB] gi|123746663|sp|Q477Q4|OXAA_DECAR RecName: Full=Inner membrane protein oxaA gi|71849431|gb|AAZ48927.1| protein translocase subunit yidC [Dechloromonas aromatica RCB] Length = 547 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 152/570 (26%), Positives = 247/570 (43%), Gaps = 44/570 (7%) Query: 3 RNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 + + + W+N+ Y P+ + P+ + AA Sbjct: 2 DTRRLILVLIFTFSSFMLWENWQKYNQPKPADAVAAAPVSGAAPTPSAALQAKAAPGTPP 61 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A +S + + L +I+ +G L L Y + K+ Y Sbjct: 62 VATPVSTAETFSITTDLLKATISAQGGDLVSLELLNYKEHDDIQKNFDLF----DAKHQY 117 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKI----LTPTTPIKLVFKNANNILFERTISLDE 176 A+ + LP T + + G T ++L + N I + ++ Sbjct: 118 LAQAGLIGEG----LPTHRTTFKHVGGATKLADGTDELKVRLESADQNGIKVAKILTFKR 173 Query: 177 -HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQK 233 YL I V N S I ++ R P T G + Sbjct: 174 GSYLIDIAWEVANGSDKAIAPHAYYQLQRDDLAPAGETKMVSTFTGPAVFTDADKYQKVT 233 Query: 234 YSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + I + + N WL + Y+ S ++P +T + + +G +QA Sbjct: 234 FEHIADNKAKFTKTADNGWLAMVQHYFVSAWVPKDKTQREFYMRKV-EGSNVFQAGVIVP 292 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 I PG + L+AG + + P ++++D+GW +A P+F + Sbjct: 293 VAEIAPGAKGEASVSLYAGPQMQSALKQV-----APGLDLVVDYGWLTVVAAPIFWALEA 347 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + LVGN+G AI++ T+ +K +FFPL+ Y S A MK + P++ +L+E+F Q L Sbjct: 348 IHKLVGNWGWAIVVLTIMIKAVFFPLSAASYKSMAKMKMLTPRLAQLKERFGDDK-QRLN 406 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LY+T +NPL GC PIL+QIPVF A+Y V+ ++EMR AP+ WIKDLA+ADP Sbjct: 407 QEMMKLYQTEKVNPLGGCLPILVQIPVFIALYWVLLGAVEMRGAPWILWIKDLASADPYY 466 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I P+IM +SMF+Q K++P P D QA ++ MP++F F Sbjct: 467 IL-------------------PVIMMVSMFVQTKLNPTPPDPIQAKVMMMMPLIFGFMFF 507 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 FPAGL++YW +NV+SI QQ I ++ A Sbjct: 508 WFPAGLVLYWVVNNVLSIAQQWQITRLIDA 537 >gi|238787832|ref|ZP_04631629.1| Inner membrane protein oxaA [Yersinia frederiksenii ATCC 33641] gi|238724175|gb|EEQ15818.1| Inner membrane protein oxaA [Yersinia frederiksenii ATCC 33641] Length = 531 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 145/575 (25%), Positives = 247/575 (42%), Gaps = 63/575 (10%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AWQ + Q N+ + +K Sbjct: 1 MIWQAWQVD------------NSPQPAAQTTQQTANTATGDKASQAVPGSGQGQLITVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 L +IN +G + NL Y + S+ L + Y A+ + Sbjct: 49 DVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFIYQAQSGLTGKSGPDNP 106 Query: 136 PN--------SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTV 186 N T + L G+ I L F + +F +T L + Y + V Sbjct: 107 ANGERPLFEVPQTSFILADGQ---DELRIPLTFTGKDGSVFTKTFLLKRNDYAIGVDYHV 163 Query: 187 TNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG--DKSLVEQKYSDIEK 239 N S + + G++ + T +N F + A + + +SDIE Sbjct: 164 KNASEAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDETKYKKYSFSDIED 223 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 S+ W+ + +Y+A+ +IP+ + F G+ F + I PG Sbjct: 224 KSL-EITTKGGWVAMLQQYFATAWIPTANE--TNTFYSADLGNGLAAIGFKGTPVVIQPG 280 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN Sbjct: 281 EQKQLGATLWVGPEIQDKMAAI-----APHLDLTVDYGWLWFISQPLFKLLKFIHSFVGN 335 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + + M+ LY Sbjct: 336 WGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMSQEMMALY 394 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP I Sbjct: 395 KAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYYIL----- 449 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538 PI+M ++M+ KMSP D Q I+ +MPV+F FPAGL Sbjct: 450 --------------PILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGL 495 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++Y+ SN+++I+QQ +I + + GL R + Sbjct: 496 VLYYIVSNLVTILQQQLIYR-GLEKRGLHSRDKKK 529 >gi|167036430|ref|YP_001671661.1| putative inner membrane protein translocase component YidC [Pseudomonas putida GB-1] gi|189036357|sp|B0KRC1|OXAA_PSEPG RecName: Full=Inner membrane protein oxaA gi|166862918|gb|ABZ01326.1| 60 kDa inner membrane insertion protein [Pseudomonas putida GB-1] Length = 560 Score = 458 bits (1179), Expect = e-126, Method: Composition-based stats. Identities = 147/583 (25%), Positives = 250/583 (42%), Gaps = 51/583 (8%) Query: 1 MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV----------KQPNQ 48 M+ +A +S ++V W + Y + N + Sbjct: 1 MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASAD 60 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPI 107 V ++ A + A + +K L +I+ G LNL Y + P Sbjct: 61 VPSANAESSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPDIPF 120 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NAN 164 L + + Y A+ + ++ +LV + N Sbjct: 121 Q--LFDNGGERVYLAQSGLTGANGPDARASGRPLYAAEQKSYQLADGQEQLVVDLKFSDN 178 Query: 165 NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE----G 219 + + + S Y + + N S + ++ R +++ G Sbjct: 179 GVNYIKRFSFKRGEYDLNVSYLIDNQSGQAWSGNMFAQLKRDASGDPSSSTATGTATYLG 238 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + + DI+K + + S W+ Y+ + +IP+K + Q + Sbjct: 239 AALWTASEPYKKVSMKDIDKGGLKE-NVSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--K 295 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 D Y ++ I++ G + T+ L+AG K + P E+ +D+G+ Sbjct: 296 DSQGNYIIGYTGPVISVPAGGKVETSAMLYAGPKIQSKLKELS-----PGLELTVDYGFL 350 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L Sbjct: 351 WFIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAAL 410 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E+F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ Sbjct: 411 KERFGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWM 469 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+ DP I PIIM +MFIQ +++P P D QA + Sbjct: 470 LWITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKV 510 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 511 MKMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEA 553 >gi|255320707|ref|ZP_05361884.1| inner membrane protein [Acinetobacter radioresistens SK82] gi|262380663|ref|ZP_06073816.1| membrane protein insertase, YidC/Oxa1 family protein [Acinetobacter radioresistens SH164] gi|255302323|gb|EET81563.1| inner membrane protein [Acinetobacter radioresistens SK82] gi|262297611|gb|EEY85527.1| membrane protein insertase, YidC/Oxa1 family protein [Acinetobacter radioresistens SH164] Length = 584 Score = 458 bits (1179), Expect = e-126, Method: Composition-based stats. Identities = 152/605 (25%), Positives = 259/605 (42%), Gaps = 70/605 (11%) Query: 3 RNWNYFVAIALSVII----VYAWQNFYVYPRIEEMNNER---------KNIQTVKQPNQV 49 + W F + ++ + AWQ Y + N Q + V Sbjct: 2 QQWARFAILGAMFVVAYLLILAWQKDYGHAETAPQQQAVVSHEVSADLPNSQAASASSDV 61 Query: 50 DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + A A + ++ IN KG + L + + S+ P V Sbjct: 62 PQANIATPQATDVTAPVNQQLISVQTDLYHLLINPKGGDIVRIELLNHDKNKDSDQPFVM 121 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI--SGKILTPTTPI----------- 156 L S+ K Y A+ + + V+ + S +L + Sbjct: 122 L--ESDAKRTYVAQSGLIGLNGPDSNRSGRPVYEVEKTSYDLLKDAQTVSKDNGKAVKVL 179 Query: 157 --KLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH------KP 207 +V+K A+ + +T + + Y + V N S + G+I R K Sbjct: 180 TIPMVYKTADGVEIIKTFTFKQGEYPIVVNHKVVNRSQQNWQGQMFGQIKRDNSEDPGKS 239 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 T G G ++ + K+ + + N W+ + Y+ S +IP + Sbjct: 240 DQGIFTLGTFLGGAWGTPEEHYNKLKFDNFNDEKL-NVDAKGGWIAVVQHYFVSAWIPGQ 298 Query: 268 -------ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 + ++ + F++ I + G ++G K I Sbjct: 299 LKLTQANGQPYAAKLESRKSADDMNIISFTSPTINVPAGTVAEVDATFYSGPK----IQS 354 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 KDLA+ +D+GW + IAK +F+ + +F+N+VGN+G +I+L T+ VKL+ +PL+ Sbjct: 355 ELKDLAV-GLNQTVDYGWLWPIAKLLFLGLQFFHNIVGNWGWSIILLTILVKLILWPLSS 413 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 K Y S A M+ I P++ ++E+F + + Q M+ LYK +NPL+GC P+LLQ+P+F Sbjct: 414 KSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPIF 472 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y V+ S+E+RHAP++GWI+DL+A DP I P++M L+ Sbjct: 473 LALYWVLMESVELRHAPWFGWIQDLSAMDPWFIL-------------------PLVMGLT 513 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 MF Q ++P PAD QA + MP++F + FPAGL++YW +N I+I+QQ I + Sbjct: 514 MFTQQSLNPQPADPMQAKVFKIMPIIFTIFMLFFPAGLVLYWIVNNSITILQQWFINRSV 573 Query: 561 GAEIG 565 E Sbjct: 574 KKERE 578 >gi|85060407|ref|YP_456109.1| putative inner membrane protein translocase component YidC [Sodalis glossinidius str. 'morsitans'] gi|84780927|dbj|BAE75704.1| putative preprotein translocase subunit [Sodalis glossinidius str. 'morsitans'] Length = 547 Score = 458 bits (1179), Expect = e-126, Method: Composition-based stats. Identities = 139/588 (23%), Positives = 251/588 (42%), Gaps = 59/588 (10%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AWQ + + + N +Q Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWQTDHAPTPTAQTTQQTANTTAADPNSQ---------- 50 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + +K L IN +G + L Y + S P L ++ + Sbjct: 51 --GVPASGQGQLITVKTDVLSLKINTRGGDIEQAFLLSYPDKLGSPQPFHLL--ETSPEF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N E P T + + L + + +++ + Sbjct: 107 VYQAQSGLTGKNGPDNPANGERPLFTTNQDTYVLADNQSELRVPLTYTTPDGVVYTKAFI 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG-- 225 L + + + N S + + G++ + T ++ F + A Sbjct: 167 LKRGDFALNVNYDINNASAQPLELTLFGQLKQSIDLPKARNTDSSNFALHTYRGAAYSTT 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D + + DI K + W+ + +Y+A+ ++P T + F G+ Sbjct: 227 DDKYQKYSFKDI-KGENLSVSTEGGWVAMLQQYFATAWVPF--TPGKNTFYTSDLGNGLA 283 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 F + +T+ G L+ G + + P ++ +D+GW +FI++P Sbjct: 284 AVGFKSAPVTVAAGGQSELKATLWLGPEIQDKMAAI-----APHLDLAVDYGWLWFISQP 338 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 339 LFKLLKFIHSYIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERLGD 398 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL Sbjct: 399 DK-QRQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSIELRHAPFALWIHDL 457 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I P++M ++MF KMSP D Q I+ +MP Sbjct: 458 SAQDPYYIL-------------------PLLMGITMFFIQKMSPTTVTDLMQQKIMTFMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 V+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 499 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSRDKK 545 >gi|258541762|ref|YP_003187195.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-01] gi|256632840|dbj|BAH98815.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-01] gi|256635897|dbj|BAI01866.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-03] gi|256638952|dbj|BAI04914.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-07] gi|256642006|dbj|BAI07961.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-22] gi|256645061|dbj|BAI11009.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-26] gi|256648116|dbj|BAI14057.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-32] gi|256651169|dbj|BAI17103.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654160|dbj|BAI20087.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-12] Length = 583 Score = 458 bits (1178), Expect = e-126, Method: Composition-based stats. Identities = 176/583 (30%), Positives = 309/583 (53%), Gaps = 24/583 (4%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 +A ALS +++ + + + + P + A A A Sbjct: 4 KRLILATALSALVLIGYDYLFPQHQPVPPPQPGVHAVAPPAPASSGAAAPAENTQAEAAA 63 Query: 65 L---SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 RV + P++ G++NL+GA+ DDL L+ Y V +SP V +L+ ++T +A + Sbjct: 64 PVKDGPETRVAINAPAVQGTLNLRGARLDDLVLKHYRETVKPDSPDVRVLNSAST-HADY 122 Query: 122 AELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 + + + ++ ++ LP++NT+W SG + P+ L + N + F+ +S+D++Y+F Sbjct: 123 VDFGWRAPSDVSVRLPDANTLWK-ASGTQMDAEHPLTLSWDNGQGLTFDIRMSVDQNYMF 181 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 I V N++ + P R+ R T V EG I+V+ D L E Y + Sbjct: 182 TISQQVHNSTGQAVALYPFYRVNRGYTPEGTGGMLVHEGPISVI-DGRLNEGSYKTVRTG 240 Query: 241 SIS------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA-NE 293 + + + W GI+DKYW +P + + + YQ F+A Sbjct: 241 GVPPDNIAWSHQGTGGWAGITDKYWLMAVLPDQNANVIGTYG-FQAAQGAYQVGFTATAP 299 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + + G++ +T +FAGAKE + YEKDL +P F +D+GW F+ +P+F ++ + Sbjct: 300 VQVAAGQTASTEAHVFAGAKEVRLLEQYEKDLHVPMFWKAVDFGWLSFLTRPVFFVLDWL 359 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 +G+FG+A++ TV VK+ F PL KQ T ++P++D +R + K P +Q+ Sbjct: 360 NEHLGSFGLALLTFTVIVKVAFLPLTIKQMRMTWKTARLKPQVDLIRSRLKDDP-MAMQQ 418 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 ++ LY+ N+N G P+L+Q PVF+ +YK + +++EMRHAPF GW+KDL+A DPTN+ Sbjct: 419 QIMALYRQENVNLFGGFLPLLIQAPVFWCLYKDLYVTIEMRHAPFVGWVKDLSAPDPTNL 478 Query: 474 FTLFGILPF---YLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWMPVVFV 528 F LFG++PF ++ F+ +G WPI+ ++F+ K+S D Q ++ ++P++F Sbjct: 479 FNLFGLVPFDPTHITPFLALGAWPIMYGATLFLMQKVSSSSANMDPSQQKVMMFIPLLFT 538 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIM---KMHGAEIGLID 568 F ++ P GL+IY+ WSN+++ VQQ +I+ K A+ L+ Sbjct: 539 FFMARQPVGLVIYYCWSNILTAVQQVIIISRLKAADAKPQLVK 581 >gi|304414291|ref|ZP_07395659.1| Preprotein translocase subunit YidC [Candidatus Regiella insecticola LSR1] gi|304283505|gb|EFL91901.1| Preprotein translocase subunit YidC [Candidatus Regiella insecticola LSR1] Length = 542 Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 149/585 (25%), Positives = 264/585 (45%), Gaps = 60/585 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + +S +I WQ P + + S V + ++ Sbjct: 4 QRNLLLIALLFVSFMIWQTWQVDNNPPSSSQTAQQ---------------STDTVSMANQ 48 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A + ++++ L +IN +G + NL Y + S+ P L + Y Sbjct: 49 TAADTQKQLIKVQTDVLSLTINTRGGDIEQANLLAYPNVLGSDKPFELL--ETTPAFIYQ 106 Query: 122 AELDYVSTAN-NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ + + ++ + I L F + ++F +T L Sbjct: 107 AQSGLTGKNGPDNPANGARPLFTATQDHFVLAENQDELRIPLTFTSQEGVIFTKTFVLKR 166 Query: 177 H-YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFIAVLG--DKS 228 + Y + V N + FS G++ + T ++ F +Q A + Sbjct: 167 NDYAIGVHYQVKNTFATPLEFSLFGQLKQSINLPQYRDTGSSNFALQTYRGAAYSSDETK 226 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + +SDIE++++ N W+ + +Y+A+ +IP+ + + LS+G A Sbjct: 227 YKKYSFSDIEETNL-NTVTQGGWVAMLQQYFATAWIPAAQETHTFYSNKLSNGLA--AIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F + + I PG+ L+ G + + ++ +D+GW +FI++P+F Sbjct: 284 FKSMPVVIPPGEQKDLAATLWIGPEIQDKMAAI-----ATHLDLTVDYGWLWFISQPLFK 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + +GN+G +I++ T V+ + +PL K QY S A M+ IQPK+ E+RE+ Sbjct: 339 LLHFIQGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMIQPKLTEMRERIGDDK- 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M+ LYKT +NPL GC P+L+Q+P+F A+Y ++ S+E+RHA F WI DL+A Sbjct: 398 QRMSQEMMALYKTEQVNPLGGCLPLLIQMPIFLALYYMLMSSVELRHASFILWIHDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M ++M+ KMSP D Q I+ +MPV+F Sbjct: 458 DPYYIL-------------------PILMGITMYFIQKMSPTTITDPMQQKIMTFMPVIF 498 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 FPAGL++Y+ SN+++I+QQ +I + GL R + Sbjct: 499 TVFFLWFPAGLVLYYIVSNLVTILQQYLIYH-GLEKRGLHQREKK 542 >gi|292493917|ref|YP_003529356.1| hypothetical protein Nhal_3959 [Nitrosococcus halophilus Nc4] gi|291582512|gb|ADE16969.1| 60 kDa inner membrane insertion protein [Nitrosococcus halophilus Nc4] Length = 554 Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 156/583 (26%), Positives = 270/583 (46%), Gaps = 53/583 (9%) Query: 3 RNWNYFV---AIALSVIIVYAWQNFYVYPR-------------IEEMNNERKNIQTVKQP 46 N+ F+ I + ++ AWQ Y + + + + P Sbjct: 2 ENYRLFLFSALILVLFLMWDAWQTDYGPIPLMPPPPQQPSASLKDSSPALPEEVPDAQLP 61 Query: 47 NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 V + + D + +E+K L I + ++ L Y + + + Sbjct: 62 EGVPGTTPPEMADMDTTPIQPGQTIEVKTDLLTVKIEMASGDLYEVQLLDYPVSLKKPNE 121 Query: 107 IVTLLSPSN-----TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 V+LL ++ T++ A T + S + L+ G+ + + L ++ Sbjct: 122 PVSLLHQADPDLFVTQSGLRAVSGPSVTHETAQFSASKAYYELVPGE---DSLVVPLTWE 178 Query: 162 NANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + N I +T + Y + + N + P + +R P++ + G Sbjct: 179 DENGIKVTKTYIFHRDSYEVDLKLKIENGTDQVWTGRPYAQFIRTPPKSDSFFVRSYIGA 238 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + + + D+ S H S W + Y+ + +IP +E S + K++ Sbjct: 239 VFSTEENEYQKVDFGDLASQSFER-HSSGGWAAMLQHYFVAAWIPREEGSNYYYGKHVR- 296 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 +RY A ++ T+ PG++ LFAG K + P+ + +D+G Sbjct: 297 -GSRYIAGVMPSQQTVAPGENGEFNLSLFAGPKIQDRLAA-----TAPKLNLTVDYGKLT 350 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 +A+P+F LMS+F++LVGN+G AI+L TV VKL+FF L++ Y S A M+ +QP++ L+ Sbjct: 351 ILAEPLFWLMSWFHSLVGNWGWAIVLLTVVVKLIFFKLSQTSYRSMARMRKLQPQLLALK 410 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ ++ Q AM++LY+ +NP+ GC PIL+QIPVF A+Y ++ S+E+RHAPF Sbjct: 411 ERHGDDRHKMGQ-AMMELYRKEKVNPMGGCLPILVQIPVFIALYWMLIESVELRHAPFVF 469 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI+DL A DP I P++M +SMF+Q K+SP P D QA ++ Sbjct: 470 WIQDLTAKDPYYIL-------------------PLLMGVSMFVQQKLSPAPTDPIQAKVI 510 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + MPV+F FPAGL++YW +N++SI QQ I + E Sbjct: 511 SLMPVMFTIFFVLFPAGLVLYWVVNNILSIAQQWYITRQIEKE 553 >gi|212632922|ref|YP_002309447.1| inner membrane protein, 60 kDa [Shewanella piezotolerans WP3] gi|254778162|sp|B8CH68|OXAA_SHEPW RecName: Full=Inner membrane protein oxaA gi|212554406|gb|ACJ26860.1| Inner membrane protein, 60 kDa, putative [Shewanella piezotolerans WP3] Length = 542 Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 135/568 (23%), Positives = 243/568 (42%), Gaps = 46/568 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + + ++ + + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPQPVAQTQSSVAPSTVADAHSSDVPDADSAL 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + + I+ G L + L+ + P V L ++ Y Sbjct: 60 PETVTASKELITVTTDQFVLKIDPVGGDIVHSALLSHKLEQDGDDPFVLLEQTNDIY--Y 117 Query: 121 FAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + T +++ ++L L + L + AN + + + + Sbjct: 118 IAQSGLIGRDGIDSSTTGRAHFDSASREYDLAGQDTL----EVPLTYLAANGVTYTKLFT 173 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVE 231 + + + N S Q++ G+I K ++ G D + Sbjct: 174 FYRGKHNVDVDYQINNTSDAQLQVQMYGQIKHSIKKSESSMMMPTYRGAAFSTADTRYEK 233 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D+ ++ N W+ + Y+ S ++P + + G A F Sbjct: 234 YSFDDMADKNL-NKSTLGGWVAMLQHYFVSAWVPPENDKNIIFSSVSAGGLAN--IGFRG 290 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I PG + + G K+ + +++D+G+ +++A P+ L+ Sbjct: 291 ALYDIAPGTEQSIKAQFYVGPKDQEALSALS-----ESLNLVVDYGFLWWLAIPIHWLLM 345 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++ + VGN+G+AI+L T+ V+ + +PL K QY S A M+N+QPK+ +++E+F Q + Sbjct: 346 FYQSFVGNWGVAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLADMKERFGDD-RQKM 404 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 405 GQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESYELRHAPFMLWITDLSVQDPY 464 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVF 529 + PI+M +SMFI KM P P D Q ++ WMPV+F Sbjct: 465 YV-------------------MPILMGVSMFIMQKMQPMAPTMDPMQVKMMQWMPVIFTV 505 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 506 FFLWFPAGLVLYWLVGNLVAITQQKIIY 533 >gi|127514791|ref|YP_001095988.1| 60 kDa inner membrane insertion protein [Shewanella loihica PV-4] gi|166977416|sp|A3QJT1|OXAA_SHELP RecName: Full=Inner membrane protein oxaA gi|126640086|gb|ABO25729.1| protein translocase subunit yidC [Shewanella loihica PV-4] Length = 542 Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 139/570 (24%), Positives = 246/570 (43%), Gaps = 50/570 (8%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N + + +S ++ WQ + ++ + T V ++ AA+ Sbjct: 1 MESQRNILLIGLLFVSFLLWQQWQTDKNPQPVATESSVVASTVTDAHSADVPDADAALP- 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + L IN G L G+ L+ P V L + Sbjct: 60 ---EAVAASKELISVTTDQLTLKINPVGGDIVYSALVGHKLEQDKEEPFVLLQQTKDIY- 115 Query: 119 AYFAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 Y ++ + T + + + L G+ T I L + N + + + Sbjct: 116 -YISQSGLIGRNGIDSSTKGRAHFSSQSQAYTLADGQ---DTLEIPLTYVADNGVTYTKV 171 Query: 172 ISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSL 229 +L + + + N S +Q++ G+I K ++ G D Sbjct: 172 FTLHRGKFDVGVEYRINNTSAEQLQVQMYGQIKHSIKKSESSMMMPTYRGAAFSTADTRY 231 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + + D+ ++ W + Y+ S ++P + G A F Sbjct: 232 EKYSFEDMADKNLDK-KTLGGWAAMLQHYFVSAWVPPANDQNTIFSSVSAGGLAN--IGF 288 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + PG T + + G K+ + +++D+G+ +++A P+ L Sbjct: 289 RGAVYDVAPGTQQTISAQFYVGPKDQEALSAIS-----ESLNLVVDYGFLWWLAIPIHWL 343 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + ++ + VGN+G+AI+L T+ V+ + +PL K QY S A M+N+QPK+ +++E+F Q Sbjct: 344 LMFYQSFVGNWGVAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLQDMKERFGDD-RQ 402 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ D Sbjct: 403 KMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESYELRHAPFMLWITDLSVQD 462 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVF 527 P + P++M +SMF+ KM P P D Q ++ WMPV+F Sbjct: 463 PYYVL-------------------PLLMGVSMFLMQKMQPMAPTMDPMQQKMMQWMPVIF 503 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 504 TVFFLWFPAGLVLYWLVGNLVAITQQKIIY 533 >gi|110807605|ref|YP_691125.1| putative inner membrane protein translocase component YidC [Shigella flexneri 5 str. 8401] gi|110617153|gb|ABF05820.1| 60 kDa inner-membrane protein [Shigella flexneri 5 str. 8401] gi|332750697|gb|EGJ81105.1| inner membrane protein oxaA [Shigella flexneri 4343-70] gi|332764076|gb|EGJ94313.1| inner-membrane protein insertion factor [Shigella flexneri 2930-71] gi|332996038|gb|EGK15665.1| inner membrane protein oxaA [Shigella flexneri VA-6] gi|332997270|gb|EGK16886.1| inner membrane protein oxaA [Shigella flexneri K-218] gi|332997871|gb|EGK17479.1| inner membrane protein oxaA [Shigella flexneri K-272] gi|333013180|gb|EGK32553.1| inner membrane protein oxaA [Shigella flexneri K-304] gi|333013666|gb|EGK33031.1| inner membrane protein oxaA [Shigella flexneri K-227] Length = 531 Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 256/572 (44%), Gaps = 56/572 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AW+ ++ +Q Q + A D A + +K Sbjct: 1 MIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIE 134 L +IN +G + L Y +++S P L ++ + Y A+ + Sbjct: 49 DVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNP 106 Query: 135 LPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNN 189 ++N+ + + + + +A F +T L Y + V N Sbjct: 107 ANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNA 166 Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSI 242 + S G++ + T ++ F + G D+ + K+ I + Sbjct: 167 GEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNEN 226 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 N W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 227 LNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIVAIGYKSQPVLVQPGQTG 284 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G Sbjct: 285 AMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGF 339 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK Sbjct: 340 SIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAE 398 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP I Sbjct: 399 KVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYIL-------- 450 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y Sbjct: 451 -----------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLY 499 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + SN+++I+QQ +I + + GL R + Sbjct: 500 YIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 530 >gi|119471654|ref|ZP_01614039.1| preprotein translocase [Alteromonadales bacterium TW-7] gi|119445433|gb|EAW26720.1| preprotein translocase [Alteromonadales bacterium TW-7] Length = 544 Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 137/566 (24%), Positives = 250/566 (44%), Gaps = 35/566 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +R + + + +S ++ W N Y P+++ + + + S + + Sbjct: 4 QRTFLFIGLMLVSFLLFQEWNNDYNQPKVDPSATTQTQQANSTESDDFIPSSSESGLP-A 62 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + L+ +E+ I+ KG + +L Y +P + L N YF Sbjct: 63 STTLAKRSVIEITTDVFKVKIDTKGGDIVESDLLQYEEVKGEETPFMLL--GEFDGNQYF 120 Query: 122 AELDYVSTANNIELPNSNTVW--NLISGKILTPTTPIKLVFKNANNILFERTISLDEH-Y 178 ++ + N + S + + L F ++N + F +T + Y Sbjct: 121 SQSGLIGLNGPDASANGRPTYHSEQTSYTLTGDELRVPLQFTDSNGVSFTKTYVFKKGQY 180 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 + TV N + I+ ++ R + + G ++ + +SD+ Sbjct: 181 DVGLEYTVNNTTSAPIQVQLYTQVKRTVQEKGSLVDQNYLGAAYGTDEEPYEKYSFSDMA 240 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 ++ N ++ Y+ S ++P ++ + S A A + + Sbjct: 241 DKNL-NESTQGGYIAFIQHYFVSAWVPKQDQTNTLYSLITSSNAAI--IGTKAEPVNVQA 297 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G T T+ + G KE + P ++ +D+GW +FI++P+F+L+ + Y+++G Sbjct: 298 GSEQTITSIYYMGPKESDVLEALH-----PDLDLTVDYGWLWFISQPLFVLLKWLYSILG 352 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+ T+ VK L +PL K QY S A M+ +QPK+ L+EK+ Q +A +++ Sbjct: 353 NWGLAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMAALKEKYGDD-RQKFGQATMEM 411 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP+ GC+PILLQ+P+F A++ V S E+RHA F W+ DL+A DP + Sbjct: 412 YKKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFMLWLTDLSAQDPYYVL---- 467 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 PI+ SMFI K+ P D Q ++ +MPV+F FP+G Sbjct: 468 ---------------PILFGASMFITQKLQPMTVTDPMQQKMMTFMPVIFSVFFLWFPSG 512 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563 L++YW SN+ISI Q I + + Sbjct: 513 LVLYWLVSNLISIAQMLYIYRGMEKK 538 >gi|294505626|ref|YP_003569688.1| membrane protein [Yersinia pestis Z176003] gi|262363791|gb|ACY60512.1| membrane protein [Yersinia pestis D106004] gi|262367727|gb|ACY64284.1| membrane protein [Yersinia pestis D182038] gi|294356085|gb|ADE66426.1| membrane protein [Yersinia pestis Z176003] Length = 529 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 146/575 (25%), Positives = 255/575 (44%), Gaps = 63/575 (10%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AWQ + + N T + +Q + +K Sbjct: 1 MIWQAWQVDNNPQPTAQTTQQTTNTATGDKASQA------------VPGSGQGQLITVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS------- 128 L +IN +G + NL Y + S++ L + Y A+ Sbjct: 49 DVLSLTINTRGGDIEQANLLAYPDTLGSSNTFELL--ETTPSFVYQAQSGLTGKNGPDNP 106 Query: 129 -TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTV 186 + T + L G+ I L F + + +F +T L + Y + V Sbjct: 107 ANGDRPLFEVPQTSFVLADGQ---DELRIPLTFTSKDGSVFIKTFVLKRNDYAIGVDYHV 163 Query: 187 TNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLG--DKSLVEQKYSDIEK 239 N S + + G++ + K T +N F +Q A + + +SDIE Sbjct: 164 NNASAAPLELTLFGQLKQSINLPKKRDTGSNNFALQTYRGAAYSSDETKYKKYSFSDIED 223 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 ++ + W+ + +Y+A+ +IP+ + F G+ F + I PG Sbjct: 224 KNL-DITTKGGWVAMLQQYFATAWIPAANE--TNTFYSAELGNGLAAIGFKGAPVVIQPG 280 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN Sbjct: 281 EQKQLSATLWVGPEIQNKMAEI-----APHLDLTVDYGWLWFISQPLFKLLKFIHSFVGN 335 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + + M+ LY Sbjct: 336 WGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMSQEMMALY 394 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP I Sbjct: 395 KAEKVNPLGGCLPLIIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYYIL----- 449 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538 PI+M ++M+ KMSP D Q I+ +MPV+F FPAGL Sbjct: 450 --------------PILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGL 495 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++Y+ SN+++I+QQ +I + + GL R + Sbjct: 496 VLYYIVSNLVTILQQQLIYR-GLEKRGLHSREKKK 529 >gi|300313620|ref|YP_003777712.1| inner-membrane transmembrane protein [Herbaspirillum seropedicae SmR1] gi|300076405|gb|ADJ65804.1| inner-membrane transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 542 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 163/524 (31%), Positives = 257/524 (49%), Gaps = 28/524 (5%) Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 P + AV D A + + + + SI+ G + L L Sbjct: 33 TGSPVPQAGTPAPGAVPGADVAATATKGETIVITTDLVKASIDTVGGELKRLELLKQPDV 92 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG-KILTPTTPIKLV 159 V +V L S + Y AE + PN T++ +G + L I+LV Sbjct: 93 VDPTKNVV--LFDSEPGHMYLAESGLIGGP----FPNHKTIFTAQAGPRTLDNGNEIQLV 146 Query: 160 FK-NANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFG 215 + + +T + + YL + TVTN + I S +++R KP ++ + Sbjct: 147 LVADQGGVKLTKTYTFKRDSYLIDVKHTVTNTTGAAINPSLYLQLVRDGNKPGGESHFYS 206 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQ 274 G + + + I + +++ N W+ + Y+ S FIP + Sbjct: 207 TFTGPAVYSNSEHFEKLDFEKIANGKQQHVNKTDNGWIAMVQHYFVSAFIPPQNAQRDVF 266 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 K + D Y T+ P S+T + L++G T+ P +++ Sbjct: 267 SKKVGDN--LYAVGSILPLGTVAPNASVTMDSQLYSGPTVSKTLQAI-----APGLDLVR 319 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+G IA+P+F LM++ +N+VGN+G I+L TV +KL+FFPL+ Y S A MK + P Sbjct: 320 DYGHLTVIAEPIFWLMTHIHNIVGNWGWTIILLTVLIKLIFFPLSAASYRSMAKMKAVSP 379 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 K+ +RE+ K P Q + + M+ LYKT INPL GC PI +QIPVF A+Y V+ S+EMR Sbjct: 380 KMQAIRERHKGDP-QAMNREMMTLYKTEKINPLGGCLPIAIQIPVFIALYSVLLASVEMR 438 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 AP+ GW+ DL A D LFG +P++ M +G+ PIIM+ SMF+Q K++P P D Sbjct: 439 GAPWLGWVHDLTAPD-----RLFGTIPYF---NMPIGLLPIIMAASMFLQTKLNPTPPDP 490 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 QA ++ +MP+VF F FP+GL++YW +N++SI QQ VI + Sbjct: 491 VQAKVMMFMPLVFSFMFFFFPSGLVLYWVTNNILSIAQQWVITR 534 >gi|325275325|ref|ZP_08141278.1| membrane protein insertase [Pseudomonas sp. TJI-51] gi|324099573|gb|EGB97466.1| membrane protein insertase [Pseudomonas sp. TJI-51] Length = 560 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 145/583 (24%), Positives = 250/583 (42%), Gaps = 51/583 (8%) Query: 1 MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV----------KQPNQ 48 M+ +A +S ++V W + Y + N + Sbjct: 1 MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASAD 60 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPI 107 V ++ A + A + +K L +I+ G LNL Y + P Sbjct: 61 VPSANADSSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPDIPF 120 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NAN 164 L + + Y A+ + ++ +LV + N Sbjct: 121 Q--LFDNGGERVYLAQSGLTGANGPDARASGRPLYAAEQKSYQLADGQQQLVVDLKFSDN 178 Query: 165 NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE----G 219 + + + S Y + + N S + ++ R +++ G Sbjct: 179 GVNYIKRFSFKRGEYDLNVSYLIDNQSSQPWSGNMFAQLKRDASGDPSSSTATGTATYLG 238 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + + D++K ++ + S W+ Y+ + +IP+K + Q + Sbjct: 239 AALWTASEPYKKVSMKDMDKGNLKE-NVSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--K 295 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 D Y ++ + + G + T+ L+AG K + P E+ +D+G+ Sbjct: 296 DSQGNYIIGYTGPALNVPAGGKVETSAMLYAGPKIQSKLKELS-----PGLELTVDYGFL 350 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L Sbjct: 351 WFIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAAL 410 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E+F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ Sbjct: 411 KERFGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWM 469 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+ DP I PIIM +MFIQ +++P P D QA + Sbjct: 470 LWITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKV 510 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 511 MKMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEA 553 >gi|309784245|ref|ZP_07678884.1| inner membrane protein oxaA [Shigella dysenteriae 1617] gi|308927752|gb|EFP73220.1| inner membrane protein oxaA [Shigella dysenteriae 1617] gi|315618589|gb|EFU99175.1| inner membrane protein oxaA [Escherichia coli 3431] gi|320180047|gb|EFW54989.1| Inner membrane protein translocase component YidC, long form [Shigella boydii ATCC 9905] gi|323173324|gb|EFZ58953.1| inner membrane protein oxaA [Escherichia coli LT-68] gi|332084895|gb|EGI90078.1| inner membrane protein oxaA [Shigella boydii 5216-82] gi|332345696|gb|AEE59030.1| inner membrane protein OxaA [Escherichia coli UMNK88] Length = 531 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 256/572 (44%), Gaps = 56/572 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AW+ ++ +Q Q + A D A + +K Sbjct: 1 MIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIE 134 L +IN +G + L Y +++S P L ++ + Y A+ + Sbjct: 49 DVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNP 106 Query: 135 LPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNN 189 ++N+ + + + + +A F +T L Y + V N Sbjct: 107 ANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNA 166 Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSI 242 + S G++ + T ++ F + G D+ + K+ I + Sbjct: 167 GEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNEN 226 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 N W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 227 LNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTG 284 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G Sbjct: 285 AMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGF 339 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK Sbjct: 340 SIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAE 398 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP I Sbjct: 399 KVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYIL-------- 450 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y Sbjct: 451 -----------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLY 499 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + SN+++I+QQ +I + + GL R + Sbjct: 500 YIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 530 >gi|152980131|ref|YP_001355384.1| preprotein translocase YidC subunit [Janthinobacterium sp. Marseille] gi|166975871|sp|A6T4D7|OXAA_JANMA RecName: Full=Inner membrane protein oxaA gi|151280208|gb|ABR88618.1| preprotein translocase YidC subunit [Janthinobacterium sp. Marseille] Length = 564 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 166/580 (28%), Positives = 259/580 (44%), Gaps = 45/580 (7%) Query: 5 WNYFVAIALSVIIVYAWQN----------FYVYPRIEEMNNERKN-------IQTVKQPN 47 + + S ++ W N F+ P + T P Sbjct: 4 KRTVLWVVFSFSLLMLWDNYNRYTGKPSIFFDNPTTQAAKPAAATDDGKTAAAPTADVPT 63 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 ++ A + D A + S V + + I+ G + L L +H S I Sbjct: 64 SSAHAANATGVPDSV-APTKSEIVTITTDLIKADIDTVGGEIRHLELLTHHESSDSTKDI 122 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG-KILTPTTPIKLVFKNA-NN 165 V L S Y + + A PN +++ + G + L ++LV + N Sbjct: 123 V--LFDSTPPRTYLGQTGLIGGA----YPNHKSLFTVRPGPRSLEAGDQVQLVLEAEQNG 176 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKP--QTATNTFGVQEGFIA 222 + +T + Y I V N + I S +++R + + G Sbjct: 177 VKLVKTYTFKRGEYKIDIKHDVINKTAAAINPSLYLQLVRDGSKLNNESMFYSTFTGPAV 236 Query: 223 VLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 + + IEK I + + W+ + Y+ S F+P K L+ Sbjct: 237 YSDSDKFQKVTFESIEKGKIEHVVKAESGWIAMVQHYFVSAFVPPANVPREYFTKKLATN 296 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 Y + PG + + L++G +E + P FE++ D+GW Sbjct: 297 --LYAVGAIMPMGAVAPGATQSMDATLYSGPQESKRLEAV-----APGFELVKDYGWLTI 349 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+F LM + L+GN+G I++ T+ +KL FFPL+ Y S A MK + PK+ E+R Sbjct: 350 IAKPIFWLMIQIHQLLGNWGWTIVVLTIVIKLAFFPLSAASYRSMAKMKLVTPKMTEIRT 409 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K PQ + AM++LYK INPL GC PI++QIPVF ++Y V+ S+EMR+AP W W Sbjct: 410 KYKG-EPQKMNAAMMELYKKEKINPLGGCMPIVIQIPVFISLYWVLLASVEMRNAP-WLW 467 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I DLA+ D TLFG + +GI PI+M++SMFIQ K++P P D QA ++ Sbjct: 468 ISDLASPD-----TLFGSYMI-GSFHLTIGILPILMAISMFIQTKLNPTPPDPIQAKVMM 521 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +MP+ F FPAGL++YW +N++SI QQ I K G Sbjct: 522 FMPIAFSLMFFFFPAGLVLYWVVNNILSIAQQWTISKKMG 561 >gi|170724369|ref|YP_001752057.1| putative inner membrane protein translocase component YidC [Pseudomonas putida W619] gi|254773014|sp|B1JFV4|OXAA_PSEPW RecName: Full=Inner membrane protein oxaA gi|169762372|gb|ACA75688.1| 60 kDa inner membrane insertion protein [Pseudomonas putida W619] Length = 560 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 148/576 (25%), Positives = 248/576 (43%), Gaps = 50/576 (8%) Query: 7 YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTV----------KQPNQVDNSYAA 55 A+A+ S ++V W + Y + N + V ++ A Sbjct: 8 LIAALAIVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAANNGASADVPSANAE 67 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPIVTLLSPS 114 + A + +K L +I+ G LNL Y + P L + Sbjct: 68 SSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPDIPFQ--LFDN 125 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILFERT 171 + Y A+ ++ +LV + N + + + Sbjct: 126 GGERVYLAQSGLTGANGPDARSTGRPLYAAEQKSFQLADGQEQLVVDLKFSDNGVNYIKR 185 Query: 172 ISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE----GFIAVLGD 226 S Y + + N S + ++ R +++ G Sbjct: 186 FSFKRGEYDLSVSYLIDNQSGQAWSGNMFAQLKRDASGDPSSSTATGTATYLGAALWTAG 245 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + + DI+K S+ + S W+ Y+ + +IP+K + Q + D Y Sbjct: 246 EPYKKVSMKDIDKGSLKE-NVSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--KDSQGNYI 302 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 ++ I++ G T+ L+AG K + P E+ +D+G+ +FIA+P+ Sbjct: 303 IGYTGPAISVPAGGKAETSAMLYAGPKIQSKLKELS-----PGLELTVDYGFLWFIAQPI 357 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + ++L+GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+E+F Sbjct: 358 FWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALKERFGDD 417 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ WI DL+ Sbjct: 418 -RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWMLWITDLS 476 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP I PIIM +MFIQ +++P P D QA ++ MP++ Sbjct: 477 IKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKVMKMMPII 517 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F F FPAGL++YW +N +SI QQ I + A Sbjct: 518 FTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEA 553 >gi|297520055|ref|ZP_06938441.1| putative inner membrane protein translocase component YidC [Escherichia coli OP50] Length = 517 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 135/533 (25%), Positives = 242/533 (45%), Gaps = 44/533 (8%) Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 D A + +K L +IN +G + L Y +++S P L + Sbjct: 14 GSAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ET 71 Query: 115 NTKNAYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 + + Y A+ N P N + + + + +A F Sbjct: 72 SPQFIYQAQSGLTGRDGPDNPANGPRPMYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFT 131 Query: 170 RTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFI 221 +T L Y + V N + S G++ + T ++ F + G Sbjct: 132 KTFVLKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAA 191 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G Sbjct: 192 YSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLG 249 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + + + + + PG++ + L+ G + + P ++ +D+GW +F Sbjct: 250 NGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWF 304 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE Sbjct: 305 ISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRE 364 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF W Sbjct: 365 RLGDDK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALW 423 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL 520 I DL+A DP I PI+M ++MF KMSP D Q I+ Sbjct: 424 IHDLSAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIM 464 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +MPV+F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 465 TFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 516 >gi|262377655|ref|ZP_06070875.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter lwoffii SH145] gi|262307414|gb|EEY88557.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter lwoffii SH145] Length = 587 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 154/610 (25%), Positives = 263/610 (43%), Gaps = 70/610 (11%) Query: 3 RNWNYFVAIALSVII----VYAWQNFY----VYPRIEE------MNNERKNIQTVKQPNQ 48 + W + ++ + AWQ Y P+ E ++ + N QT + Sbjct: 2 QQWARIAILGAMFVVAYLLILAWQKDYGNAETKPQQETAVVSHDVSADLPNGQTATVASD 61 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 + + A A + ++ IN KG + L + + S+ P V Sbjct: 62 LPQANVPAQQATDATAPVSQQLISVQTDLYHLWINPKGGDIVRIELLNHDKNKDSDEPFV 121 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNS-------NTVWNLISGKILTPT-------T 154 L S+ K Y A+ + N T + L K + Sbjct: 122 ML--ESDAKRTYVAQSGLIGLNGPDSSRNGRPMYELEKTAYTLADAKTVKSKDGENLKVL 179 Query: 155 PIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH------KP 207 + LVFK A+ I +T + E Y + V N S + G+I R K Sbjct: 180 SVPLVFKTADGIEIIKTFNFTEGEYPVVVNHKVVNRSGQTWQGQMFGQIKRDNSEDPGKS 239 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 T G G D+ + K+ + + +S + W+ + Y+ S ++P + Sbjct: 240 DQGIFTLGTFLGGAWGTPDEQYNKLKFDNFVEEKVST-EATGGWVAMVQHYFVSAWVPGQ 298 Query: 268 -------ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 ++ ++ + F++ + G ++G K + Sbjct: 299 LKLTQGNGEAYSAKLESRKSTDNMNIIGFTSPTFNVPAGTVAEIDATFYSGPKIQSELKD 358 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 L +D+GW + IAK +F+ + +F+ LVGN+G AI+L T+ VKL+ +PL+ Sbjct: 359 LAAGLN-----QTVDYGWLWPIAKLLFVGLEFFHGLVGNWGWAIILLTILVKLILWPLSS 413 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 K Y S A M+ I P++ ++E+F + + Q M+ LYK +NPLAGC P+LLQ+P+F Sbjct: 414 KSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQ-EMMALYKREQVNPLAGCLPLLLQMPIF 472 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y V+ S+E+RHAP+ WI+DL++ DP I P++M L+ Sbjct: 473 LALYWVLMESVELRHAPWMLWIQDLSSMDPWFIL-------------------PLLMGLT 513 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 M+IQ ++P P D QA + +MP++F L FPAGL++YW +N+I+I+QQ +I K Sbjct: 514 MYIQQSLNPQPTDPMQAKVFKFMPIIFTVFLLFFPAGLVLYWIVNNLITILQQTLINKSV 573 Query: 561 GAEIGLIDRL 570 + D + Sbjct: 574 AKDRAKRDEV 583 >gi|33575018|emb|CAE39684.1| probable inner-membrane protein [Bordetella parapertussis] Length = 554 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 153/571 (26%), Positives = 255/571 (44%), Gaps = 52/571 (9%) Query: 11 IALSVIIVYAWQNFYVYP-RIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS- 68 + S ++ W N+ ++ + +QP N AA + + + Sbjct: 1 MIFSFSLLLLWNNWQIHNGKPSLFGGPAPEAAATQQPKADANGTAASSTASIPSSPAAAP 60 Query: 69 ----------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 +V + L + + GAQ L Y S+ P V + Sbjct: 61 AAASVPGAAAPAAAKSEQVVITTDVLRLTFDSNGAQLIRAELLKYPSSSQSDKPTVLM-- 118 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERT 171 + Y A+ V P T ++L+S + + +VF+ + +T Sbjct: 119 DRSADLVYVAQTGVVGAPQGESFPTHQTPFHLVSSERSLTGDTLDVVFEAESGGLKVTKT 178 Query: 172 ISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKS 228 +L Y + + N + + ++ R P ++ + G Sbjct: 179 YTLHRGRYDVDVRHAMANTGGAPLSPALYLQLERDGTDPAGTSSFYHTFTGVAVYSEQDK 238 Query: 229 LVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + +SDIEK + ++ N W+GI Y+A+ +IP++ ++ L Y A Sbjct: 239 FQKVTFSDIEKKKGTYIKQADNGWIGIVQHYFATAWIPAQGKQRTNEL--LQVQQNLYAA 296 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + TI PG S L+ G ++ + P E+++D+GW IAKP+F Sbjct: 297 RTIEAVGTIAPGSSANVDAHLWVGPQDQKAMAAV-----APGLELVVDYGWLTIIAKPLF 351 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 LM++ + L+GN+G I+ TV +K +FFPLA Y S A MK + P++ L+EK+ Sbjct: 352 TLMTWLHGLLGNWGWTIVALTVIIKAVFFPLAAASYRSMARMKQVAPRLQALKEKYGDD- 410 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q L +AM+++Y+T INPL GC P+++QIPVF A+Y V+ S+EMR AP+ W+ DL+ Sbjct: 411 RQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAPWILWVHDLSV 470 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I P IM +MF+Q+K++P P D QA ++ MP+VF Sbjct: 471 RDPFFIL-------------------PAIMMATMFLQIKLNPTPPDPVQAKVMMIMPLVF 511 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FPAGL++YW +N +SI QQ I + Sbjct: 512 GGMMFFFPAGLVLYWCVNNTLSIAQQWTITR 542 >gi|149911783|ref|ZP_01900387.1| Putative inner membrane protein, 60 kDa [Moritella sp. PE36] gi|149805129|gb|EDM65151.1| Putative inner membrane protein, 60 kDa [Moritella sp. PE36] Length = 547 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 148/570 (25%), Positives = 257/570 (45%), Gaps = 46/570 (8%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N V + +S ++ WQN + N T P D+S A Sbjct: 1 MESQRNLLVIGLLFVSFLLFTEWQNKDNPVAVPTTTQAFTNGLTGDVPAGSDSSTDAPNS 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + + L +I+ G +L + ++ + L ++ N Sbjct: 61 KQ------SNNLITISSDVLELTIDTLGGDIVRADLLEHATELDAEERFTLL--QNDATN 112 Query: 119 AYFAELDYVSTANNIELPNSNTVW--NLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 Y A+ + N + S I T I L + +AN + F + +L Sbjct: 113 VYVAQSGLIGANGPDANVNGRPQYSTTATSFTISGDTLSIPLSYTDANGVEFTKIFTLTR 172 Query: 177 -HYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAVLG--DKSLVE 231 +Y + + N S + I G++ + + ++ +Q A LG DK + Sbjct: 173 GNYDVDVSYKINNQSANAISVQMYGQLKQNIDLSEDTGSSMMMQAYRGAALGTTDKRYEK 232 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS--FHSQFKYLSDGHARYQAKF 289 + DI +++S + W+G+ Y+ S +IP + + + F Sbjct: 233 YDFDDISDANLSR-TTTAGWVGMLQHYFVSAWIPGNSQNHFYTLNIGRTDFTQGQAIIGF 291 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 I T + L+ G K + + ++ +D+ W +FIA+P+F L Sbjct: 292 KQPVEAIAANSETTISAKLWLGPKLQDQMGEL-----VEGLDLTVDYSWLWFIAQPLFQL 346 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + +F+ LVGN+GIA+++ T V+ +PL K QY S A M+ +QPK+ LREK Q Sbjct: 347 LQFFHGLVGNWGIAVIMITFTVRGAMYPLTKAQYTSMAKMRLLQPKLTALREKCGDDK-Q 405 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + ++M+ LYK +NPL GC+P+++Q+P+F ++Y + S+E+RHAPF WI DL+A D Sbjct: 406 KMSQSMMALYKEEKVNPLGGCFPMIIQMPIFISLYWALMESVELRHAPFALWINDLSAQD 465 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P + P++M ++M++ KMSP D Q ++ +MPV+F Sbjct: 466 PYYVL-------------------PLLMGVTMYMIQKMSPTQVQDPMQQKVMQFMPVMFT 506 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FPAGL++YW SNV++I+QQ +I + Sbjct: 507 FFFLWFPAGLVLYWLMSNVVTIIQQTIIFR 536 >gi|33568943|emb|CAE35357.1| probable inner-membrane protein [Bordetella bronchiseptica RB50] Length = 554 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 153/571 (26%), Positives = 255/571 (44%), Gaps = 52/571 (9%) Query: 11 IALSVIIVYAWQNFYVYP-RIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS- 68 + S ++ W N+ ++ + +QP N AA + + + Sbjct: 1 MIFSFSLLLLWNNWQIHNGKPSLFGGPAPEAAATQQPKADANGTAASSTASIPSSPAAAP 60 Query: 69 ----------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 +V + L + + GAQ L Y S+ P V + Sbjct: 61 AAASVPGAAAPAAAKSEQVVITTDVLRLTFDSNGAQLIRAELLKYPSSSQSDKPTVLM-- 118 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERT 171 + Y A+ V P T ++L+S + + +VF+ + +T Sbjct: 119 DRSADLVYVAQTGVVGAPQGESFPTHQTPFHLVSSERSLTGDTLDVVFEAESGGLKVTKT 178 Query: 172 ISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKS 228 +L Y + + N + + ++ R P ++ + G Sbjct: 179 YTLHRGRYDVDVRHAMANTGGAPLNPALYLQLERDGTDPAGTSSFYHTFTGVAVYSEQDK 238 Query: 229 LVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + +SDIEK + ++ N W+GI Y+A+ +IP++ ++ L Y A Sbjct: 239 FQKVTFSDIEKKKGTYIKQADNGWIGIVQHYFATAWIPAQGKQRTNEL--LQVQQNLYAA 296 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + TI PG S L+ G ++ + P E+++D+GW IAKP+F Sbjct: 297 RTIEAVGTIAPGSSANVDAHLWVGPQDQKAMAAV-----APGLELVVDYGWLTIIAKPLF 351 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 LM++ + L+GN+G I+ TV +K +FFPLA Y S A MK + P++ L+EK+ Sbjct: 352 TLMTWLHGLLGNWGWTIVALTVIIKAVFFPLAAASYRSMARMKQVAPRLQALKEKYGDD- 410 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q L +AM+++Y+T INPL GC P+++QIPVF A+Y V+ S+EMR AP+ W+ DL+ Sbjct: 411 RQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAPWILWVHDLSV 470 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I P IM +MF+Q+K++P P D QA ++ MP+VF Sbjct: 471 RDPFFIL-------------------PAIMMATMFLQIKLNPTPPDPVQAKVMMIMPLVF 511 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FPAGL++YW +N +SI QQ I + Sbjct: 512 GGMMFFFPAGLVLYWCVNNTLSIAQQWTITR 542 >gi|332084044|gb|EGI89251.1| inner membrane protein oxaA [Shigella dysenteriae 155-74] Length = 531 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 256/572 (44%), Gaps = 56/572 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AW+ ++ +Q Q + A D A + +K Sbjct: 1 MIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIE 134 L +IN +G + L Y +++S P L ++ + Y A+ + Sbjct: 49 DVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNP 106 Query: 135 LPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNN 189 ++N+ + + + + +A F +T L Y + V N Sbjct: 107 ANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNA 166 Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSI 242 + S G++ + T ++ F + G D+ + K+ I + Sbjct: 167 GEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNEN 226 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 N W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 227 LNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTG 284 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G Sbjct: 285 AMNSTLWVGPEIQDKMATV-----APHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGF 339 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK Sbjct: 340 SIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAE 398 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP I Sbjct: 399 KVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYIL-------- 450 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y Sbjct: 451 -----------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLY 499 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + SN+++I+QQ +I + + GL R + Sbjct: 500 YIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 530 >gi|53802852|ref|YP_115424.1| inner membrane protein, 60 kDa [Methylococcus capsulatus str. Bath] gi|81680702|sp|Q602M6|OXAA_METCA RecName: Full=Inner membrane protein oxaA gi|53756613|gb|AAU90904.1| inner membrane protein, 60 kDa [Methylococcus capsulatus str. Bath] Length = 545 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 145/554 (26%), Positives = 254/554 (45%), Gaps = 40/554 (7%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S ++ WQ Y + + P + + + V + A S R+ + Sbjct: 16 SFLLWEQWQIDYGPKPQAVAQTDGASRPAGDLPQRPSDDESDVTVHTEAPTQEGSRRIRV 75 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 L I+ +G L+L Y + V LL+ + + A+ ++ A Sbjct: 76 HTDVLSLEIDTRGGDLRQLDLLNYPVSKEQPDRPVRLLTDQG--DIFVAQSGFIGAAQ-- 131 Query: 134 ELPNSNTVWNLISGKILTPT----TPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTN 188 ++PN +++W +G+ + L + + + +T L YL + T+ N Sbjct: 132 QVPNHHSLWQAEAGEYRLQDGQDILRVPLTWSDGQGVTVTKTYILRRGSYLIDMEQTIDN 191 Query: 189 NSIDQIRFSPRGRIMRHKPQTA---TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 S ++ R +P +A + G + DKS + + D+ ++ + Sbjct: 192 RSNTNWTGRQYMQLQRKEPTSAQEDSQFIRTYTGGVLHTEDKSYEKIAFKDMASGNL-DA 250 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 W+ + Y+ + ++P E K L+D + + + G S T Sbjct: 251 KSRQGWIAMIQHYFLAAWVPPAEDESTFYTKALAD--RVFVIGAYSPPAEVPAGSSQTLK 308 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 LFAG K + P E+ D+G IAKP++ L+ F+ N+G AI+ Sbjct: 309 ARLFAGPKLQHVLEGI-----APGLELTADFGILTVIAKPIYWLLETFHGFFNNWGWAII 363 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 T+ +K LFF L++ Y S ANM+ +QPK+ EL+E++ + Q +AM++LY+ +N Sbjct: 364 FVTLVIKALFFKLSEASYRSMANMRKLQPKLVELKERYGED-RQRYNQAMMELYRKEKVN 422 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC PIL+QIPVF ++Y V+ S+++R APF W+ DL++ DP + Sbjct: 423 PLGGCLPILVQIPVFISLYWVLVESVDLRQAPFLLWLDDLSSKDPYFVL----------- 471 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 P+IM +SMFIQ +++PPP D QA ++ + P+VF FP+GL++YW + Sbjct: 472 --------PLIMGVSMFIQQRLNPPPTDPIQARVMQFFPLVFTVFFLFFPSGLVLYWVVN 523 Query: 546 NVISIVQQAVIMKM 559 N++SI+QQ I + Sbjct: 524 NILSIIQQWYITRQ 537 >gi|293417177|ref|ZP_06659804.1| inner membrane protein oxaA [Escherichia coli B185] gi|293464029|ref|ZP_06664443.1| inner membrane protein oxaA [Escherichia coli B088] gi|312972003|ref|ZP_07786177.1| inner membrane protein oxaA [Escherichia coli 1827-70] gi|291321661|gb|EFE61097.1| inner membrane protein oxaA [Escherichia coli B088] gi|291431208|gb|EFF04201.1| inner membrane protein oxaA [Escherichia coli B185] gi|310334380|gb|EFQ00585.1| inner membrane protein oxaA [Escherichia coli 1827-70] gi|320191195|gb|EFW65845.1| Inner membrane protein translocase component YidC, long form [Escherichia coli O157:H7 str. EC1212] gi|320193748|gb|EFW68381.1| Inner membrane protein translocase component YidC, long form [Escherichia coli WV_060327] gi|323164683|gb|EFZ50478.1| inner membrane protein oxaA [Shigella sonnei 53G] gi|323182500|gb|EFZ67904.1| inner membrane protein oxaA [Escherichia coli 1357] gi|323189560|gb|EFZ74840.1| inner membrane protein oxaA [Escherichia coli RN587/1] gi|325499510|gb|EGC97369.1| putative inner membrane protein translocase component YidC [Escherichia fergusonii ECD227] gi|326337246|gb|EGD61081.1| Inner membrane protein translocase component YidC, long form [Escherichia coli O157:H7 str. 1044] gi|326341617|gb|EGD65406.1| Inner membrane protein translocase component YidC, long form [Escherichia coli O157:H7 str. 1125] Length = 531 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 256/572 (44%), Gaps = 56/572 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AW+ ++ +Q Q + A D A + +K Sbjct: 1 MIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIE 134 L +IN +G + L Y +++S P L ++ + Y A+ + Sbjct: 49 DVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNP 106 Query: 135 LPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNN 189 ++N+ + + + + +A F +T L Y + V N Sbjct: 107 ANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNA 166 Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSI 242 + S G++ + T ++ F + G D+ + K+ I + Sbjct: 167 GEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNEN 226 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 N W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 227 LNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTG 284 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G Sbjct: 285 AMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGF 339 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK Sbjct: 340 SIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAE 398 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP I Sbjct: 399 KVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYIL-------- 450 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y Sbjct: 451 -----------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLY 499 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + SN+++I+QQ +I + + GL R + Sbjct: 500 YIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 530 >gi|332286192|ref|YP_004418103.1| putative inner membrane protein translocase component YidC [Pusillimonas sp. T7-7] gi|330430145|gb|AEC21479.1| putative inner membrane protein translocase component YidC [Pusillimonas sp. T7-7] Length = 565 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 153/534 (28%), Positives = 260/534 (48%), Gaps = 34/534 (6%) Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 P + V D + + S +V + + + GAQ L Y Sbjct: 61 AAPSTPAATPSGNETVPSDSTPEQAAASQKVNVTTDVYDLTFDTVGAQLVKAELVKYTAP 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 S + P+V L +++ + Y A+ + N P T + L+S + + +VF Sbjct: 121 GSKDQPMVLL--DNSSTSTYLAQTGVIGAPNGQSYPTHLTPFKLVSSETSLTGDTLDIVF 178 Query: 161 K-NANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGV 216 + A+ + +T +L + Y + + N + I S +++R P +++ + Sbjct: 179 EAQADGVKVVKTYTLHKGRYDIDVKHDIYNLGTEPITPSLYLQLVRDGNDPSDSSSFYST 238 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQF 275 G + + +SDI+K S ++ N W+G+ Y+AS +IP++ T H++ Sbjct: 239 FTGPALYSAGEKFQKITFSDIDKGKASYTQQADNGWIGMVQHYFASAWIPAQGTVRHNET 298 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 LS+ Y + + I PG++++ L+ G ++ + P E+++D Sbjct: 299 LRLSNN--LYAIRSIESAGAIQPGQNVSVEANLWVGPQDQKAMGEL-----APGLELVVD 351 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW IAKP+F +M++ + L+GN+G I+ T +KL+F+PL+ Y S A MK + P+ Sbjct: 352 YGWLTIIAKPLFKIMTWLHALLGNWGWTIVALTFLIKLVFYPLSAASYRSMAKMKQVTPR 411 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + LREKF + L AM+++Y+T INPL GC P+++QIPVF ++Y V+ S+EMR Sbjct: 412 LQALREKFGDDKAK-LNAAMMEMYRTEKINPLGGCLPMVVQIPVFISLYWVLLGSVEMRG 470 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 AP+ WI+DL+ DP I F M +MF+Q+K++P P D Sbjct: 471 APWILWIQDLSVRDPWFILPAF-------------------MMATMFLQIKLNPTPPDPT 511 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 QA I+ MP+VF + FPAGL++YW +N +SI QQ IM E R Sbjct: 512 QAKIMMIMPLVFGGMMFFFPAGLVLYWCVNNAVSIAQQRYIMHKLDKETAAAKR 565 >gi|320174821|gb|EFW49944.1| Inner membrane protein translocase component YidC, long form [Shigella dysenteriae CDC 74-1112] gi|320185530|gb|EFW60296.1| Inner membrane protein translocase component YidC, long form [Shigella flexneri CDC 796-83] gi|332089380|gb|EGI94484.1| inner membrane protein oxaA [Shigella boydii 3594-74] Length = 531 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 256/572 (44%), Gaps = 56/572 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AW+ ++ +Q Q + A D A + +K Sbjct: 1 MIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIE 134 L +IN +G + L Y +++S P L ++ + Y A+ + Sbjct: 49 DVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNP 106 Query: 135 LPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNN 189 ++N+ + + + + +A F +T L Y + V N Sbjct: 107 ANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNA 166 Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSI 242 + S G++ + T ++ F + G D+ + K+ I + Sbjct: 167 GEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNEN 226 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 N W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 227 LNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTG 284 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G Sbjct: 285 AMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGF 339 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK Sbjct: 340 SIIIITFIVRGIMYPLTKTQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAE 398 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP I Sbjct: 399 KVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYIL-------- 450 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y Sbjct: 451 -----------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLY 499 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + SN+++I+QQ +I + + GL R + Sbjct: 500 YIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 530 >gi|313647713|gb|EFS12161.1| inner membrane protein oxaA [Shigella flexneri 2a str. 2457T] Length = 531 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 138/572 (24%), Positives = 255/572 (44%), Gaps = 56/572 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AW+ ++ +Q Q + A D A + +K Sbjct: 1 MIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIE 134 L +IN +G + L Y +++S P L ++ + Y A+ + Sbjct: 49 DVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNP 106 Query: 135 LPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNN 189 ++N+ + + + + +A F +T L Y + V N Sbjct: 107 ANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNA 166 Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSI 242 + S G++ + T ++ F + G D+ + K+ I + Sbjct: 167 GEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNEN 226 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 N W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 227 LNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIVAIGYKSQPVLVQPGQTG 284 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G Sbjct: 285 AMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGF 339 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK Sbjct: 340 SIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAE 398 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP I Sbjct: 399 KVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYIL-------- 450 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 PI+M ++M KMSP D Q I+ +MPV+F FP+GL++Y Sbjct: 451 -----------PILMGVTMLFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLY 499 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + SN+++I+QQ +I + + GL R + Sbjct: 500 YIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 530 >gi|163859332|ref|YP_001633630.1| putative inner membrane protein translocase component YidC [Bordetella petrii DSM 12804] gi|254772752|sp|A9IJB7|OXAA_BORPD RecName: Full=Inner membrane protein oxaA gi|163263060|emb|CAP45363.1| yidC [Bordetella petrii] Length = 563 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 149/588 (25%), Positives = 260/588 (44%), Gaps = 52/588 (8%) Query: 5 WNYFVAIALSVIIVYAWQNFYVY------------------PRIEEMNNERKNIQTVKQP 46 + + S ++ W N+ ++ ++ + Sbjct: 4 RRTILWMIFSFSLLLLWNNWQIHNGKPSLFGTPPASSAASPAEGQQAAANGQAATPSVPT 63 Query: 47 NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + + V A A + +V + L + + GAQ L Y N P Sbjct: 64 TPAAAAASTVPGATAAPAAAKVEQVVVSTDVLRLTFDTTGAQLIRAELLKYPTSGQPNKP 123 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK-NANN 165 V L + + Y + V N PN T + L+S +++VF+ ++ Sbjct: 124 TVLL--DRSPELTYVVQSGLVGAPNGQSFPNHQTPFRLVSTDHELKGDSLQVVFEADSGG 181 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIA 222 + +T +L Y + ++ N S + S ++ R P ++ + G Sbjct: 182 LKVTKTYTLHRGRYDIDVQHSLANTSDAPLAPSLYLQLERDGNDPADTSSFYHTFTGVAV 241 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 + +SDI K S ++ N WL + Y+A+ ++P + ++ + Sbjct: 242 YSEQDKFQKITFSDIAKGKGSYIKQADNGWLAVVQHYFATAWVPPQGKQRTNELLQVQPN 301 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 Y A+ T+ PG + + L+ G ++ + P E+++D+GW Sbjct: 302 --LYAARSIEAVGTVQPGATAQVDSRLWVGPQDQKAMAAV-----APGLELVVDYGWLTI 354 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+F L+++ ++L+GN+G AI+ TV +K +FFPLA Y S A MK + P++ L+E Sbjct: 355 IAKPLFSLLTWLHSLLGNWGWAIVALTVIIKAVFFPLAAASYRSMARMKQVAPRLQALKE 414 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ Q L +AM+++Y+T INPL GC P+++QIPVF A+Y V+ S+EMR AP+ W Sbjct: 415 KYGDD-RQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAPWILW 473 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + DL+ DP I P +M +MF+Q+K++P P D QA ++ Sbjct: 474 VHDLSVRDPYFIL-------------------PAVMMATMFLQIKLNPTPPDPIQAKVMM 514 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 MP+VF + FPAGL++YW +N +SI QQ I + + Sbjct: 515 IMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWTITRNLQRKAEAAAN 562 >gi|192360367|ref|YP_001984274.1| inner membrane protein, 60 kDa [Cellvibrio japonicus Ueda107] gi|254772765|sp|B3PIU1|OXAA_CELJU RecName: Full=Inner membrane protein oxaA gi|190686532|gb|ACE84210.1| inner membrane protein, 60 kDa [Cellvibrio japonicus Ueda107] Length = 552 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 155/577 (26%), Positives = 270/577 (46%), Gaps = 51/577 (8%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ N +A +VI++ W +F P+ + N + P+ + +AV Sbjct: 1 MDWQKNLLLAAIAAVILMLFIRWNHFQEQLPQHQAGNTPAGSSIAAIAPDSNGDIPSAVP 60 Query: 58 I-DDRAQALSMSPR---VELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPIVTLLS 112 D QA + S + +++K +L+ +IN G ++L + ++ + P V L + Sbjct: 61 TASDTPQATADSSKVELIQVKTDNLLVTINPLGGDIASVSLPRHFAKLNTPDEPFVLLDN 120 Query: 113 PSNTKNAYFAELDYVSTANNIE------LPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 +N + Y ++ + T +S+T + L G + + L + + Sbjct: 121 RNN--HTYVSQSGLIGTNGTDTAQGRPLFNSSSTSYELKEG---SDGLVVDLTLQQGA-V 174 Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT---FGVQEGFIA 222 + S YL + + N + G+I R + G Sbjct: 175 NITKRFSFKRGDYLIGVEYLIDNQAETPWSAQLYGQIKRDSQNFVKVSALEMNPYLGAAI 234 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 +++ + + DI K + W+ + Y+ S +IP + + + + L D Sbjct: 235 TTSEENYKKIHFEDIAKQTFET-SRQGGWVAMVQHYFISAWIPDASSQVNYKLRKLGD-Q 292 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y F+ + + PG +AG K+ + P ++ +D+GW ++I Sbjct: 293 DLYLLGFTTQPVVVEPGSKGVIKASFYAGPKDTERLEEIS-----PYLDLTVDYGWLWWI 347 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+F + + + +GN+G+AI+ T+ VKLLFFPL+ Y S A M+ +QPK+ EL+E+ Sbjct: 348 AKPLFAFLKFIHGFLGNWGLAIIGLTLSVKLLFFPLSAASYRSMAKMRKLQPKLLELKER 407 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + + Q + M++LYKT +NP GC P+L+Q+PVF A+Y V+ S+E+RHAPF+GWI Sbjct: 408 YGED-RQKFSQEMMKLYKTEQVNPFGGCLPLLIQMPVFIALYWVLMESVELRHAPFFGWI 466 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 +DL+ DP + PII +M+I K++P P D QA I+N Sbjct: 467 EDLSRMDPYFVL-------------------PIIYGATMWIMQKLNPQPTDPMQARIMNM 507 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P VF F FPAGL++YW +N++SI QQ VI + Sbjct: 508 LPFVFTFMFLWFPAGLVLYWVTNNLLSIAQQYVITRQ 544 >gi|119773151|ref|YP_925891.1| inner membrane protein, 60 kDa [Shewanella amazonensis SB2B] gi|166977413|sp|A1S1G5|OXAA_SHEAM RecName: Full=Inner membrane protein oxaA gi|119765651|gb|ABL98221.1| inner membrane protein, 60 kDa [Shewanella amazonensis SB2B] Length = 541 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 143/570 (25%), Positives = 248/570 (43%), Gaps = 51/570 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N + I L + WQ + P+ I + V + A V Sbjct: 1 MESQRNLLL-IGLLFVSFLLWQQWESDKAPKPATEVTAAAQIHDQAINSDVPTADAGVP- 58 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + + + L IN G L + L+ + +P V L +N Sbjct: 59 ---ATVAATQNLILVTTDQLEIQINPVGGDIVHAALLTHKLEQNEEAPFVLLEQKNNF-- 113 Query: 119 AYFAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 +Y A+ + + + + + L G+ T + L + F + Sbjct: 114 SYIAQSGLIGRDGIDSAASGRAKFAAAADAYTLADGQ---DTLEVPLTLTTDAGVTFTKV 170 Query: 172 ISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQEGFIAVLGDKSL 229 + + V NNS ++ G+I + + ++ G D Sbjct: 171 FVFKRGQFDVGVDYRVANNSAAPVQVQMYGQIKQTITASESSMMMPTYRGAAFSTADVRY 230 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + + D+ K + W+ + Y+ S ++P+ + G A F Sbjct: 231 EKYSFDDMGKKDLEEP-TLGGWVAMLQHYFVSAWVPAAADKNTLFTSVSAGGLAN--IGF 287 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + + PG + T + + G K+ + L +++D+G+ +++A P+ + Sbjct: 288 KGSVHDVAPGATETISATFYVGPKDQAALSALSDTLN-----LVVDYGFLWWLAVPIHWI 342 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + +F +LV N+G+AI+L T+ V+ L +PL K QYVS A M+N+QPK+ +L+++F Q Sbjct: 343 LMFFQSLVHNWGVAIILVTLTVRGLLYPLTKAQYVSMAKMRNLQPKLQDLKDRFGDD-RQ 401 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI+DL+ D Sbjct: 402 KMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWIQDLSVQD 461 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVF 527 P + P++M SM+ KM P P D Q +L WMP++F Sbjct: 462 PYYVL-------------------PLLMGASMWAMQKMQPMAPNMDPMQQKMLQWMPMIF 502 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 503 TVFFLWFPAGLVLYWLVGNLVAITQQKIIY 532 >gi|89092261|ref|ZP_01165215.1| inner membrane protein, 60 kDa [Oceanospirillum sp. MED92] gi|89083349|gb|EAR62567.1| inner membrane protein, 60 kDa [Oceanospirillum sp. MED92] Length = 545 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 146/574 (25%), Positives = 247/574 (43%), Gaps = 48/574 (8%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD-----NSY 53 M+ + +S ++V W Y + E QP D ++ Sbjct: 1 MDVQRIILIGALCLISYMLVLQWNQDY-GQQPEAQQATTSVSAYDTQPVATDLPKAEDTA 59 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + A+ + + +K L I+ KG L Y + S P V L Sbjct: 60 QTGDVPGTAEQAQQAQLITVKTDVLDIIIDTKGGDIIQAALPQYKAALGSELPFVLL--K 117 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPIKLVFKNANNILFER 170 NT Y ++ V P + + + L T + L F + + + Sbjct: 118 QNTNRTYVSQSGLVGKNGPDASPEGRPTYAVTKNEYLLGDQDTLAVDLTFTDKQGVQITK 177 Query: 171 TISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT--FGVQEGFIAVLG-- 225 + Y + V N S Q + G+I R + T + G+Q V Sbjct: 178 RYTFTKGSYEINLEFIVNNQSEQQWAGNLFGQIKRDRSDDPTQSTDMGMQSYLGGVFSTA 237 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + + D++ + ++ +S Y+ S +IP+ + Q + L + Y Sbjct: 238 EDPYEKIDFDDMDDGQFKK-SSPDGYVAMSQHYFLSAWIPAPGAEYSYQSRKL---NGNY 293 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 F + + + G+ + + G K+ + +LA + +D+GW ++IA P Sbjct: 294 IVGFLSPDFLVNAGEDKKVSATFYVGPKDQEIM-----ELAQENLPLTVDYGWLWWIASP 348 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 ++ML+ + Y LVGN+G+AI+ T+ VK F L K + S A M+ P++ L+E + Sbjct: 349 LYMLLKWIYGLVGNWGLAIIGITIVVKAALFHLNAKAFKSMAKMRKFGPEMTRLKELYGD 408 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M++LY+ INPL GC PIL Q+P+F A+Y V+ S+++RHA + ++ DL Sbjct: 409 D-RQKMSQEMMKLYQKEKINPLGGCLPILAQMPIFIALYWVLMESVDLRHA-EFLYLADL 466 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 + DP I PIIM +SMFIQ ++P P D QA I+ +P+ Sbjct: 467 SVKDPYFIL-------------------PIIMGVSMFIQQMLNPTPPDPMQAKIMKMLPI 507 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +F F FPAGL +YW +N++SI QQ VI K Sbjct: 508 MFTFFFLWFPAGLTLYWVVNNILSIAQQYVINKQ 541 >gi|163803611|ref|ZP_02197477.1| putative inner membrane protein translocase component YidC [Vibrio sp. AND4] gi|159172605|gb|EDP57463.1| putative inner membrane protein translocase component YidC [Vibrio sp. AND4] Length = 540 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 148/572 (25%), Positives = 259/572 (45%), Gaps = 46/572 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + ++ + + Q S+A L Sbjct: 1 MDSQRN-ILLIALALVSFMLFQKW----QVAKNPAPQAIEQAQSSSTLPAPSFADELDPV 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Q + + + + L SI+ G NL Y ++ S+ P V L + + Sbjct: 56 PGQQQASAKTITVTTDVLTLSIDTLGGDVVHANLNKYSAELDSSDPFVLLKDTKG--HQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I+L ++N +S T + + F AN I + +T + Sbjct: 114 IAQSGLVGPQG-IDLSSTNRPSYKVSADSFTLPDGQDELRVPMTFT-ANGIEYIKTYVFE 171 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y + + NNS + + ++ + T G D + Sbjct: 172 RGSYALNVEYDIVNNSGNNATLGMYAHLRQNLMDDGGSITMPTYRGGAYSTEDVRYKKYS 231 Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + D++ ++S N + W + Y+A+ +IP E + + + + Sbjct: 232 FDDMQDRNLSINLADGKGWAAMIQHYFAAAWIPRDEPGTNLYTRVIGNLGD---IGVRIP 288 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI G T L+ G K + P ++++D+GW +F+AKP+ L+++ Sbjct: 289 NKTIATGDQTTFKATLWVGPKLQNEMAAV-----APNLDLVVDYGWLWFLAKPLHSLLAF 343 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + VGN+GIAI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 344 IQSFVGNWGIAIVCLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMS 402 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NPL GC P++LQ+P+F ++Y + S+E+RH+PF+GWI DL+A DP Sbjct: 403 QEMMELYKKEKVNPLGGCLPLVLQMPIFISLYWALMESVELRHSPFFGWIHDLSAQDPYY 462 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M +SMFI KMSP D Q I+ +MP++F F Sbjct: 463 IL-------------------PVLMGVSMFIIQKMSPTTVTDPMQQKIMTFMPLMFTFFF 503 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 504 FMFPSGLVLYWLVSNIVTLIQQTLIYKSLEKK 535 >gi|297539958|ref|YP_003675727.1| membrane protein insertase [Methylotenera sp. 301] gi|297259305|gb|ADI31150.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Methylotenera sp. 301] Length = 542 Score = 456 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 152/562 (27%), Positives = 258/562 (45%), Gaps = 42/562 (7%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + + S+ I+ W + E+ +++ QTV + + + D Sbjct: 2 DTKRLVLFVIFSMSILMLWDAWQRQHAPAEVV--QQSSQTVAGATSSTAAVSGNVAVDSD 59 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 LS R+ + I G L L + + + V LL S Y A Sbjct: 60 FKLSAGQRISVTTDLYKADIETTGGDLRRLELLKHRASDNVKTNFV-LLDDSAKPMTYVA 118 Query: 123 ELDYVSTANNIELPNSNTVWNLISG----KILTPTTPIKLVFKNANNILFERTISLDEH- 177 + + +LP+ V+ + + T ++L + N + ++ + + Sbjct: 119 QTGLIG----ADLPSHKAVFTSAAPTYQMQDGKDTLEVRLSWV-GNGVTVDKVYTFHRNK 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y + + N S I +I+ + + G + + D Sbjct: 174 YAIDVNYEIKNGSAAAITPVVYYQIVHDNESNQGSKLMPTFTGGTYYTEATKFKKLAFKD 233 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + K + ++ W+G+ Y+ S +IP + + L Y+ + TI Sbjct: 234 MAKEPLK-VTSNDGWVGLLQHYFVSAWIPKDGLAREFYTEKL--NEHMYRIGSKSTLSTI 290 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG S+T LF+G + + P E +D+GW +A P+F ++S ++L Sbjct: 291 APGASLTVPARLFSGPQTKKDLVE-----TAPGLEYTVDYGWLKMVASPLFWVLSLIHSL 345 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 V N+G+AI+L T+ +K F+PL+ K Y S A M+ + P+++ +++KF Q +Q+AM+ Sbjct: 346 VHNWGVAIILLTLLIKAAFYPLSAKSYRSMAQMRELAPRLESMKQKFGDD-RQKMQQAMM 404 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYKT INP++GC PIL+QIPVF ++Y ++ S+E+RHAPF+GWI+DL+A DP I Sbjct: 405 ELYKTEKINPMSGCLPILIQIPVFISLYWMLLGSIELRHAPFFGWIQDLSAVDPYYIL-- 462 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 PIIM +SM IQ K++P P D QA ++ WMPV+F FPA Sbjct: 463 -----------------PIIMGISMIIQTKLNPKPTDPIQAKVMTWMPVIFSVFFFFFPA 505 Query: 537 GLIIYWSWSNVISIVQQAVIMK 558 GL++YW +N+ISI QQ + K Sbjct: 506 GLVLYWVVNNIISIWQQWYVNK 527 >gi|121998020|ref|YP_001002807.1| 60 kDa inner membrane insertion protein [Halorhodospira halophila SL1] gi|166975869|sp|A1WWE3|OXAA_HALHL RecName: Full=Inner membrane protein oxaA gi|121589425|gb|ABM62005.1| protein translocase subunit yidC [Halorhodospira halophila SL1] Length = 550 Score = 456 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 150/574 (26%), Positives = 262/574 (45%), Gaps = 46/574 (8%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME + IAL S+++ +AW+ + P E + E+++ + P+ + Sbjct: 1 MENQR-LILLIALAGISLLLYFAWEREQMDP-AEPVVEEQESEVDQEAPDAPSRAEEPDA 58 Query: 58 IDDRAQAL-----SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 D A+ + + RV +K + I+ +G L+L + +P L Sbjct: 59 GDPMAEGVVDPDDEDAKRVRVKTDLIEAEISTQGGDIRQLDLLKHQKASDDPTPYRLLRD 118 Query: 113 PSNTKNAYFAELDYVS----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 + A+ + + L G+ T + L+++ + + Sbjct: 119 EGEP--LFVAQAGLGGDGPAPGRDARYEVDQDEFELAEGE---DTLEVPLIWE-EDGVKV 172 Query: 169 ERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ--EGFIAVLG 225 + + + YL + V NN+ D ++ R T + + G Sbjct: 173 RKVYTFRRDSYLVDVRHEVENNAEDDWAGFQYVQLRRRPDPAGTTPWYIHSFTGGSLYTQ 232 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + +SD+E S +S E + W + Y+ V IP + ++ + L Y Sbjct: 233 EDRFSRISFSDMEDSDLSQ-DERDGWAAMLQHYFLGVMIPERGETYRYYTRALPQE--TY 289 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 S+ + + G+S TN LF G KE + L + + +D+G+ +A P Sbjct: 290 LLGMSSPWLQVAAGESGQKTNHLFVGPKEQDRLTAVGSALDVDDLRLTVDYGFLTILANP 349 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F + NLV N+G+AI++ T+ +K+ F+ L+ Y S A M+ +QPK+ ++RE++ Sbjct: 350 LFWALDQIENLVKNWGVAILILTLLIKIAFYKLSAISYRSMAKMRKVQPKMQQIRERYSD 409 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + +A+++LYK INPL GC PIL+QIPVF A+Y V+ S+E+RHAPF WI+DL Sbjct: 410 DRQQ-MNQALMELYKKEKINPLGGCLPILVQIPVFIALYWVLVESVELRHAPFMLWIQDL 468 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 ++ DP I P++M SM +QMK++PPP D Q ++ +P Sbjct: 469 SSRDPYFIL-------------------PLLMGASMLVQMKLNPPPMDPIQKRVMQVLPF 509 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 VF FPAGL++YW +N++SI QQ I++ Sbjct: 510 VFTGFFMLFPAGLVLYWLTNNILSIAQQWYILRQ 543 >gi|152979764|ref|YP_001345393.1| putative inner membrane protein translocase component YidC [Actinobacillus succinogenes 130Z] gi|171704505|sp|A6VR61|OXAA_ACTSZ RecName: Full=Inner membrane protein oxaA gi|150841487|gb|ABR75458.1| 60 kDa inner membrane insertion protein [Actinobacillus succinogenes 130Z] Length = 537 Score = 456 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 140/559 (25%), Positives = 254/559 (45%), Gaps = 50/559 (8%) Query: 12 ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRV 71 +S ++ W E++ K + +Q D ++ + + + Sbjct: 14 FISFLVYQQW----------EIDKAPKPVVRETAVSQSDTPNSSSASTSAVDSQAKGRVI 63 Query: 72 ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN 131 L+N ++ G + L Y +++ L + T Y A+ V N Sbjct: 64 TLQNDVFRLKVDTLGGDVIESELLNYAQELNGEERFTLLENKDGT--TYVAQSGLVG-KN 120 Query: 132 NIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTV 186 I+ + + + + F+ + +++ + L Y + + Sbjct: 121 GIDSAAGRADYQVNGDNFVLAEGQDELSVPFTFE-KDGVIYRKIFMLKRGSYDIAVNYEI 179 Query: 187 TNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 N S + I P G++ +++ + G + + + + D+ K + + Sbjct: 180 RNQSDETIEVQPYGQLKHTLVESSGSMAMPTYTGGAYSSSETNYKKYSFDDM-KGANLSV 238 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 + W+ + Y+ S +IP+++ Y + + F +T+ G + T Sbjct: 239 NTKAGWVAVLQHYFVSAWIPNQDADNQL---YTTTNNGMGFIGFRGPTVTVPAGATETVK 295 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 L+ G K + ++ +D+GW +FIAKP+F L++ +LV N+G+AI+ Sbjct: 296 TALWTGPKLQNQM-----GEVAEHLDLTVDYGWAWFIAKPLFALLTLIQSLVSNWGLAII 350 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK +N Sbjct: 351 GVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERFGDD-RQRMSQEMMKLYKEEKVN 409 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC P+L+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP I Sbjct: 410 PLGGCLPLLIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIL----------- 458 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 P++M SMF+ K+SP P AD Q ++N+MPV+F FPAGL++YW Sbjct: 459 --------PLLMGGSMFLLQKLSPTPVADPMQQKVMNFMPVIFTVFFLWFPAGLVLYWLV 510 Query: 545 SNVISIVQQAVIMKMHGAE 563 SNVI+I+QQ +I + + Sbjct: 511 SNVITIIQQQLIYRGLEKK 529 >gi|323177717|gb|EFZ63301.1| inner membrane protein oxaA [Escherichia coli 1180] Length = 531 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 256/572 (44%), Gaps = 56/572 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AW+ ++ +Q Q + A D A + +K Sbjct: 1 MIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIE 134 L +IN +G + L Y +++S P L ++ + Y A+ + Sbjct: 49 DVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNP 106 Query: 135 LPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNN 189 ++N+ + + + + +A F +T L Y + V N Sbjct: 107 ANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNA 166 Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSI 242 + S G++ + T ++ F + G D+ + K+ I + Sbjct: 167 GEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNEN 226 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 N W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 227 LNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTG 284 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G Sbjct: 285 AMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGF 339 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK Sbjct: 340 SIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QHISQEMMALYKAE 398 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP I Sbjct: 399 KVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYIL-------- 450 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y Sbjct: 451 -----------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLY 499 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + SN+++I+QQ +I + + GL R + Sbjct: 500 YIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 530 >gi|327250848|gb|EGE62550.1| inner membrane protein oxaA [Escherichia coli STEC_7v] Length = 531 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 255/572 (44%), Gaps = 56/572 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AW+ + +Q Q + A D A + +K Sbjct: 1 MIWQAWE------------QDTNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIE 134 L +IN +G + L Y +++S P L ++ + Y A+ + Sbjct: 49 DVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNP 106 Query: 135 LPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNN 189 ++N+ + + + + +A F +T L Y + V N Sbjct: 107 ANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNA 166 Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSI 242 + S G++ + T ++ F + G D+ + K+ I + Sbjct: 167 GEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNEN 226 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 N W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 227 LNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQAG 284 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G Sbjct: 285 AMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGF 339 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK Sbjct: 340 SIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAE 398 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP I Sbjct: 399 KVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYIL-------- 450 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y Sbjct: 451 -----------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLY 499 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + SN+++I+QQ +I + + GL R + Sbjct: 500 YIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 530 >gi|254490319|ref|ZP_05103508.1| 60Kd inner membrane protein [Methylophaga thiooxidans DMS010] gi|224464452|gb|EEF80712.1| 60Kd inner membrane protein [Methylophaga thiooxydans DMS010] Length = 546 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 150/576 (26%), Positives = 256/576 (44%), Gaps = 45/576 (7%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ-------VDN 51 M+ +F+ + +S+++ AWQN YV P+ + T + P + Sbjct: 1 MDNLRTFFIFGLLIVSLLLWEAWQNDYVRPQQAADVASQTQTTTPQAPVSDELPDMPSAS 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + + + Q + S +V +K + I +G DL L Y + V L Sbjct: 61 AESLPDVPQSQQVSASSGKVHVKTDVMDLHIATQGGDIRDLALLEYAVSSEQPDTPVQFL 120 Query: 112 SPSNTKNAYFAELDYVSTANNI----ELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 + S + + + + + T + L +G+ I L +++ + + Sbjct: 121 NDSAGQ-FFVTQSGLRADGDAPTHYEHYQAEQTEYVLQAGQ---DELKIPLYWQSESGLQ 176 Query: 168 FERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 +T + + Y+ + V NNS + P ++ R++ + G + Sbjct: 177 VVKTYNFKRDSYVVNVDYQVINNSGETFSAYPYAQLNRNRSDDDSMFIYTYTGAVFSSKG 236 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + + D++ + S + W + Y+ + IP + S F S Y Sbjct: 237 NEYEKVDFDDLDDKAFSR-SSIDGWAAMIQHYFVAAIIPPQ-ASEQLGFYGKSINGTNYT 294 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 A I+ G+ T L+ G K+ + ++L + +D+G I++P+ Sbjct: 295 AGVRMPAISASSGEQAATQYQLYLGPKKHERLDKVAENLP-----LTVDYGILTIISEPL 349 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F +M + + L GN+G +I+L TV +KL FF L+ Y S A M+ + PK+ L+E++ Sbjct: 350 FWIMEWLHKLTGNWGWSIILLTVLIKLAFFKLSATSYRSMAAMRKLTPKLATLKERYGDD 409 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q +AM+ LY+T INPL GC PIL+Q+PVF A Y V+ S+E+R A F WI DL Sbjct: 410 K-QKFNQAMMDLYRTEKINPLGGCLPILVQMPVFLAFYWVLVESIELRQADFMLWINDLT 468 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 A DP I P++ LSM+ Q K++P P D QAM++ P+V Sbjct: 469 AMDPYFIL-------------------PVLFGLSMWFQQKLNPAPQDPAQAMMMKIFPLV 509 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F + FPAGL++YW +NV+SI QQ I + GA Sbjct: 510 FTVFFAFFPAGLVLYWVVNNVLSIAQQWYITRKMGA 545 >gi|226947217|ref|YP_002802290.1| putative inner membrane protein translocase component YidC [Azotobacter vinelandii DJ] gi|259515637|sp|C1DNF7|OXAA_AZOVD RecName: Full=Inner membrane protein oxaA gi|226722144|gb|ACO81315.1| inner membrane protein, translocase subunit YidC [Azotobacter vinelandii DJ] Length = 557 Score = 455 bits (1171), Expect = e-125, Method: Composition-based stats. Identities = 142/586 (24%), Positives = 250/586 (42%), Gaps = 57/586 (9%) Query: 5 WNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTV---------KQPNQVDNS 52 + +AL S ++V W Y + N ++ V + Sbjct: 4 KRSILLVALAVVSYLLVLQWNQDYGQAALPPQNAVAQSASPALPETVPGDSSTSADVPTA 63 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 + + D A + + S ++++ L +I+ +G L L + L Sbjct: 64 GSGNQVPDSAASTAGSDLIQVRTDVLEVAIDPRGGDIVQLKLPKFPRRQDHPEIPFQLFD 123 Query: 113 PSNTKNAYFAELDYVSTANNIELPNS-------NTVWNLISGKILTPTTPIKLVFKNANN 165 + ++ Y A+ T + + L G+ + + L F + Sbjct: 124 -NGSERLYLAQSGLTGTNGPDARADGRPLYVSEQRSYQLADGQ---DSLVVDLKFSDG-G 178 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + + + Y ++ + N+S + ++ R G Sbjct: 179 VDYVKRFTFKRGAYDLEVRHQIANHSEQPWSGNLFAQLKRDASADPSSTTATGTATYLGA 238 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 ++ + D++ ++ W+ Y+ + ++P+K+ + + D Sbjct: 239 ALWTSEEPYRKVSMGDMDDKNLRE-TVQGGWVAWLQHYFVTAWVPNKDDTNLVATR--KD 295 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y F+ + + I G + T L+AG K+ + P E+ +D+G+ + Sbjct: 296 SQGNYIIGFTGSTLNIPAGATGETVTRLYAGPKDQNQLEALS-----PGLELTVDYGFLW 350 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + L+GN+G +I++ TV +KL FFPL+ Y S M+ + PK+ L+ Sbjct: 351 FIAQPIFWLLELIHALLGNWGWSIIVLTVIIKLAFFPLSAASYRSMGRMRAVAPKLQALK 410 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ + Q L +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ G Sbjct: 411 EQHGED-RQKLSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWLG 469 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MF Q ++P P D QA ++ Sbjct: 470 WITDLSVKDPYFIL-------------------PIIMGATMFFQQTLNPTPPDPMQARVM 510 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 MP++F F FPAGL++YW +NV+SI QQ I + L Sbjct: 511 KLMPIIFTFFFLWFPAGLVLYWVVNNVLSIGQQWYITRQIEKAAQL 556 >gi|110835614|ref|YP_694473.1| inner membrane protein [Alcanivorax borkumensis SK2] gi|123149157|sp|Q0VKU7|OXAA_ALCBS RecName: Full=Inner membrane protein oxaA gi|110648725|emb|CAL18201.1| inner membrane protein, 60 kDa, putative [Alcanivorax borkumensis SK2] Length = 582 Score = 455 bits (1170), Expect = e-125, Method: Composition-based stats. Identities = 158/607 (26%), Positives = 255/607 (42%), Gaps = 80/607 (13%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVY---PRIEEMNNERKNIQTVKQP--------- 46 ME + +S +++ AWQ Y P E E+ N + Sbjct: 1 MEIQRALVITGIAVVSYLMIQAWQRDYANTASPVPVEQVAEQGNSSSSDSADLPSVQSQT 60 Query: 47 ------NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 Q DN +V D AQ S R+E+ L IN G L L Y Sbjct: 61 DNSIPSAQSDNDLPSVSPADIAQPTPSSQRIEVNTDVLRVEINPVGGDIVRLALPDYPKH 120 Query: 101 VS-SNSPIVTLLSPSNTKNAYFAELDYVS------TANNIELPNSNTVWNLISGKILTPT 153 V + P V + N+ Y A+ V + ++ + L G Sbjct: 121 VDTPDQPFVLM--DQNSNGTYVAQSGLVGKNGTDSSKGRPHWNSAQQSYRLAEGD---NE 175 Query: 154 TPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212 + L + + + YL ++ V NN + G+I R Sbjct: 176 LNVDLTLTQDSGAEIIKRYTFEKGSYLIRVSHIVRNNGSTPWTGALYGQIKRDGRDDPGL 235 Query: 213 T------FGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIP 265 + G DK + + D+ + + + WL + Y+ S +IP Sbjct: 236 SKAGFAPMPTYLGAAYWSADKPYNKLTFDDMSEDDVKLDQTVEGGWLAMVQHYFVSAWIP 295 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + H YL +Y +F + TI PG+ + +AG K+ + Sbjct: 296 DAKQKNHYSSVYLK-SRDQYLLRFVSPNTTIQPGEESVLYSEFYAGPKQQDNLEAIS--- 351 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL--------------VGNFGIAIMLTTVFV 371 P M +D+GW +FI++P+F L+ + + VGN+G+AI+L T+ + Sbjct: 352 --PGLNMTVDYGWLWFISQPIFALLVFLQSGEVSVFGMDIDIGGGVGNWGVAIILLTLII 409 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 K +FF L+ Y S A M+ + P++ ++E+ K Q Q + L+K INPL GC Sbjct: 410 KAIFFKLSATSYRSMAKMRKVAPEMQRIKEQNKNDK-QKQQMETMNLFKREKINPLGGCL 468 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 P+L+Q+PVF A+Y V+ S+E+R APF+ WI DL+ DP + Sbjct: 469 PMLVQMPVFIALYYVLLESVELRQAPFFLWINDLSVMDPYFVL----------------- 511 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 PI+M SMF+Q +++P PAD QA ++ WMP++F + FPAGL++YW +N++SI Sbjct: 512 --PILMGASMFLQTRLNPTPADPTQAQVMKWMPMIFAVFMLWFPAGLVLYWLTNNILSIA 569 Query: 552 QQAVIMK 558 QQ +I + Sbjct: 570 QQWIITR 576 >gi|323161043|gb|EFZ46962.1| inner membrane protein oxaA [Escherichia coli E128010] Length = 531 Score = 455 bits (1170), Expect = e-125, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 255/572 (44%), Gaps = 56/572 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AW+ ++ +Q Q + A D A + +K Sbjct: 1 MIWQAWE------------QDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIE 134 L +IN +G + L Y ++S P L ++ + Y A+ + Sbjct: 49 DVLDLTINTRGGDVEQALLPAYPKKLNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNP 106 Query: 135 LPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNN 189 ++N+ + + + + +A F +T L Y + V N Sbjct: 107 ANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNA 166 Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSI 242 + S G++ + T ++ F + G D+ + K+ I + Sbjct: 167 GEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNEN 226 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 N W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 227 LNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTG 284 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G Sbjct: 285 AMNSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGF 339 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK Sbjct: 340 SIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAE 398 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP I Sbjct: 399 KVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYIL-------- 450 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y Sbjct: 451 -----------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLY 499 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + SN+++I+QQ +I + + GL R + Sbjct: 500 YIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 530 >gi|17544723|ref|NP_518125.1| inner membrane protein translocase component YidC [Ralstonia solanacearum GMI1000] gi|38503108|sp|Q8Y3H6|OXAA_RALSO RecName: Full=Inner membrane protein oxaA gi|17427012|emb|CAD13532.1| putative preprotein translocase subunit yidc transmembrane [Ralstonia solanacearum GMI1000] Length = 553 Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 151/576 (26%), Positives = 249/576 (43%), Gaps = 54/576 (9%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEM--NNERKNIQTVKQPNQVDNSY--------- 53 + + S+ +V + N+ + M + T P Sbjct: 4 KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTVTTTAAAPGGTPAGDVPKAAAPAA 63 Query: 54 ---AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 A S ++ + + +++ GA L L + + Sbjct: 64 AGSQAAPATGAVSQTPASEKIVVTTDVIRATVDTAGAIVTKLELL----TQKDHDGNPMV 119 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG-KILTPTTPIKLVFK-NANNILF 168 L + + Y A + + PN TV+ +G + L + L + Sbjct: 120 LFDRSLERTYLARSGLIGG----DFPNHTTVFTASAGPRDLGTGGEVSLTLTADKGGAKL 175 Query: 169 ERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGD 226 +T Y+ VTN+ I + + R + + G Sbjct: 176 AKTYVFKRGSYVIDTRFDVTNDGAAPINPTLYMELARDGGAVEQSRFYSTFTGPAVYTDT 235 Query: 227 KSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + ++DI+KS ++ W+ + Y+AS +IP+ + Y Sbjct: 236 DHYHKITFADIDKSKAHVPAPTDSGWVAMVQHYFASAWIPAASAKREFYVDRIDTN--FY 293 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + T+ PG S++ T LFAG +E + P E++ D+GW IAKP Sbjct: 294 RVGMQQALGTVAPGASVSATARLFAGPQEERMLEGIT-----PGLELVKDYGWLTIIAKP 348 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + L+GN+G +I+ TV VKL+FFPL+ Y S A MK++QP++ +RE+ K Sbjct: 349 LFWLLEKIHKLLGNWGWSIVALTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKG 408 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 P Q + + M+ LY+T +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ GW+ DL Sbjct: 409 DP-QKMNQEMMTLYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWVHDL 467 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 A+ DP I PI+M++SMF+Q +++P P D QA ++ +MP+ Sbjct: 468 ASPDPFYIL-------------------PILMAVSMFVQTRLNPTPPDPVQAKMMMFMPI 508 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F FPAGL++YW +N +SI QQ I +M G Sbjct: 509 AFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 544 >gi|37678187|ref|NP_932796.1| putative inner membrane protein translocase component YidC [Vibrio vulnificus YJ016] gi|61214266|sp|Q7MQK5|OXAA_VIBVY RecName: Full=Inner membrane protein oxaA gi|37196926|dbj|BAC92767.1| inner membrane protein, 60 kDa [Vibrio vulnificus YJ016] Length = 539 Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 138/539 (25%), Positives = 242/539 (44%), Gaps = 41/539 (7%) Query: 34 NNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 N + ++ + + + A +D + + + + L SI+ G + Sbjct: 28 NPAPQAVEQAQTSSTLPAPSFADELDPAPAQQASAKLITVTTDVLTLSIDTVGGDVVAAD 87 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT-- 151 L Y +++S + L + + A+ V I+L ++N +S T Sbjct: 88 LNQYSAELNSANAFELLRDTQG--HQFIAQSGLVGPQG-IDLSSNNRPSYQVSADSFTLA 144 Query: 152 ---PTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 I + ++ AN + + +T L Y + V N S + + ++ Sbjct: 145 DDQNELRIPMTYQ-ANGLEYTKTFILKRGSYAIDVEFDVINKSGNNATLGMYAHLRQNLM 203 Query: 208 QTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIP 265 + T G D + + D++ ++S W + Y+A+ +IP Sbjct: 204 DAGGSITMPTYRGGAYSTEDTRYKKYSFEDMQDRNLSLTLTNGQGWAAMIQHYFAAAWIP 263 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 E + + + + T+ G S T L+AG K + Sbjct: 264 RNEPGANLYTRVIGNMGD---IGVRMPNKTVADGDSAHFTATLWAGPKLQDQMAEV---- 316 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 P ++++D+GW +FIAKP+ L+S + VGN+G+AI+ T V+ +PL K QY S Sbjct: 317 -APNLDLVVDYGWLWFIAKPLHWLLSVIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTS 375 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A M+ +QPK+ +RE+ Q + + M++LYK +NPL GC P++LQ+P+F A+Y Sbjct: 376 MAKMRMLQPKLQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYW 434 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + S+E+RH+PF WI DL+A DP I P++M SMF+ Sbjct: 435 ALMESVELRHSPFILWIHDLSAQDPYFIL-------------------PLLMGGSMFLIQ 475 Query: 506 KMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 KMSP D Q I+ +MPV+F F FP+GL++YW SN+++++QQ++I K + Sbjct: 476 KMSPTTVTDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQSLIYKALEKK 534 >gi|27364440|ref|NP_759968.1| membrane protein insertase [Vibrio vulnificus CMCP6] gi|38503001|sp|Q8DDI2|OXAA_VIBVU RecName: Full=Inner membrane protein oxaA gi|27360559|gb|AAO09495.1| OxaI/YidC membrane insertion protein [Vibrio vulnificus CMCP6] Length = 539 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 139/539 (25%), Positives = 242/539 (44%), Gaps = 41/539 (7%) Query: 34 NNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 N + ++ + + + A +D + + + + L SI+ G + Sbjct: 28 NPAPQAVEQAQTSSTLPAPSFADELDPAPAQQASAKLITVTTDVLTLSIDTVGGDVVAAD 87 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT-- 151 L Y +++S + L + + A+ V I+L ++N +S T Sbjct: 88 LNQYSAELNSANAFELLRDTQG--HQFIAQSGLVGPQG-IDLSSNNRPSYQVSADSFTLA 144 Query: 152 ---PTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 I + ++ AN + + +T L Y + V N S + + ++ Sbjct: 145 DDQNELRIPMTYQ-ANGLEYTKTFILKRGSYAIDVEFDVINKSGNNATLGMYAHLRQNLM 203 Query: 208 QTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIP 265 + T G D + + D++ ++S W + Y+A+ +IP Sbjct: 204 DAGGSITMPTYRGGAYSTEDTRYKKYSFEDMQDRNLSLTLTNGQGWAAMIQHYFAAAWIP 263 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 E + + + + TI G S T L+AG K + Sbjct: 264 RNEPGANLYTRVIGNMGD---IGVRMPNKTIADGDSAHFTATLWAGPKLQDQMAEV---- 316 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 P ++++D+GW +FIAKP+ L+S + VGN+G+AI+ T V+ +PL K QY S Sbjct: 317 -APNLDLVVDYGWLWFIAKPLHWLLSVIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTS 375 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A M+ +QPK+ +RE+ Q + + M++LYK +NPL GC P++LQ+P+F A+Y Sbjct: 376 MAKMRMLQPKLQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYW 434 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + S+E+RH+PF WI DL+A DP I P++M SMF+ Sbjct: 435 ALMESVELRHSPFILWIHDLSAQDPYFIL-------------------PLLMGGSMFLIQ 475 Query: 506 KMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 KMSP D Q I+ +MPV+F F FP+GL++YW SN+++++QQ++I K + Sbjct: 476 KMSPTTVTDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQSLIYKALEKK 534 >gi|77461960|ref|YP_351467.1| putative inner membrane protein translocase component YidC [Pseudomonas fluorescens Pf0-1] gi|123602665|sp|Q3K428|OXAA_PSEPF RecName: Full=Inner membrane protein oxaA gi|77385963|gb|ABA77476.1| putative inner membrane protein [Pseudomonas fluorescens Pf0-1] Length = 560 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 147/579 (25%), Positives = 247/579 (42%), Gaps = 50/579 (8%) Query: 5 WNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + +AL S ++V W Y + N + N+ AA R Sbjct: 4 KRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVASSTTTSGLPDTATGNNAAASDDIPR 63 Query: 62 AQALSMSP----------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + + +P +++K L SI+ +G L L Y L Sbjct: 64 AASDTSAPAETPVAASKDLIQIKTDVLDLSIDPQGGDVAQLTLPLYPRRQDRPDVPFQLF 123 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILF 168 + + Y A+ + T P +++ KLV + + + + Sbjct: 124 D-NGGERTYLAQSGLIGTNGPDANPAGRPIYSSEKKTYQLADGQDKLVVDLKFSKDGVNY 182 Query: 169 ERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAV 223 + +L Y + + N S S ++ R G Sbjct: 183 IKRFTLKRGLYDVTVTYLIDNQSAQPWSGSMFAQLKRDASADPSSTTATGTATYLGAALW 242 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + + D++K+ + + W+ Y+ + ++ K + Q + D Sbjct: 243 TSSEPYKKVSMKDMDKAQLKE-TVTGGWVAWLQHYFVTAWVAPKGENNIVQTR--KDSKG 299 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y ++ +T PG + T+ L+AG K + P E+ +D+G +FIA Sbjct: 300 NYIIGYTGPSLTAAPGAKVETSAVLYAGPKSQAVLKELS-----PGLELTVDYGILWFIA 354 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +P+F L+ + +++VGN+G +I+ T+ +K +FFPL+ Y S A M+ + PK+ L+E+ Sbjct: 355 QPIFWLLQHIHSIVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAALKEQH 414 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR APF WI Sbjct: 415 GDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFMLWIT 473 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I PIIM +MFIQ +++P P D QA ++ M Sbjct: 474 DLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKVMKMM 514 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P++F F FPAGL++YW +N +SI QQ I + A Sbjct: 515 PIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKIEA 553 >gi|320157824|ref|YP_004190203.1| inner membrane protein translocase component YidC, long form [Vibrio vulnificus MO6-24/O] gi|319933136|gb|ADV88000.1| inner membrane protein translocase component YidC, long form [Vibrio vulnificus MO6-24/O] Length = 539 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 139/539 (25%), Positives = 243/539 (45%), Gaps = 41/539 (7%) Query: 34 NNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 N + ++ + + + A +D + + + + L SI+ G + Sbjct: 28 NPAPQAVEQAQTSSTLPAPSFADELDPAPAQQASAKLITVTTDVLTLSIDTVGGDVVAAD 87 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT-- 151 L Y +++S + L + + A+ V I+L ++N +S T Sbjct: 88 LNQYSAELNSANAFELLRDTQG--HQFIAQSGLVGPQG-IDLSSNNRPSYQVSADSFTLA 144 Query: 152 ---PTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 I + ++ AN + + +T L Y + V N S + + ++ Sbjct: 145 DDQNELRIPMTYQ-ANGLEYTKTFILKRGSYAIDVEFDVINKSGNNATLGMYAHLRQNLM 203 Query: 208 QTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIP 265 + T G D + + D++ ++S W + Y+A+ +IP Sbjct: 204 DAGGSITMPTYRGGAYSTEDTRYKKYSFEDMQDRNLSLTLANGQGWAAMIQHYFAAAWIP 263 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 E + + + + TI G S T L+AG K + Sbjct: 264 RNEPGANLYTRVIGNMGD---IGVRMPNKTIADGDSAHFTATLWAGPKLQDQMAEV---- 316 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 P ++++D+GW +FIAKP+ L+S ++VGN+G+AI+ T V+ +PL K QY S Sbjct: 317 -APNLDLVVDYGWLWFIAKPLHWLLSVIQSVVGNWGVAIICLTFIVRGAMYPLTKAQYTS 375 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A M+ +QPK+ +RE+ Q + + M++LYK +NPL GC P++LQ+P+F A+Y Sbjct: 376 MAKMRMLQPKLQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYW 434 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + S+E+RH+PF WI DL+A DP I P++M SMF+ Sbjct: 435 ALMESVELRHSPFILWIHDLSAQDPYFIL-------------------PLLMGGSMFLIQ 475 Query: 506 KMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 KMSP D Q I+ +MPV+F F FP+GL++YW SN+++++QQ++I K + Sbjct: 476 KMSPTTVTDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQSLIYKALEKK 534 >gi|119900278|ref|YP_935491.1| propable 60 Kd inner-membrane protein [Azoarcus sp. BH72] gi|119672691|emb|CAL96605.1| propable 60 Kd inner-membrane protein [Azoarcus sp. BH72] Length = 538 Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 155/560 (27%), Positives = 252/560 (45%), Gaps = 44/560 (7%) Query: 11 IALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS 68 + ++ +V W+ + + P + E S A A S + Sbjct: 1 MVFTLSLVMLWEGWIKHNRPPVTETPTAAAPEAATGAVPTPSASLGGTPAVPAAAAASSA 60 Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 PRV++ L ++ +G L L + + LL ++ Y AE + Sbjct: 61 PRVKVVTDVLQAEVSAEGGSIVRLELEKHRATTDRSRGF--LLLDDGERHLYAAESGLIG 118 Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFK----NANNILFERTISLDE-HYLFKIV 183 T LP T + L +G + +LV + N + + ++ YL + Sbjct: 119 TG----LPTHRTRFALPAGDQVLKDGEDRLVLRLEAPEQNGVKVTKVMTFHRGSYLVDVN 174 Query: 184 DTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDIEKS 240 + N + ++ + R KP FGV G + K+SDI++ Sbjct: 175 YEIANGGAEPVKAHAYYQFTRDGKPAEQVEAFGVTTFTGPAYYTDAAKFQKVKFSDIDEG 234 Query: 241 SISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 +N W+ + Y+ ++P + + G Y A + + PG Sbjct: 235 KAKFAKTANDGWVAMVQHYFVGAWLPEAGVEREYFARKV--GGDLYSAGAIESVADVQPG 292 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + L+ G +E + + P ++++D+GW IA P+F +S + L GN Sbjct: 293 ATGNAQARLYVGPQEQDKLENI-----APGLDLVVDYGWLTVIAAPLFWALSALHKLTGN 347 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L TV +K LFFPL+ Y S A M+ + P++ ++E + + +Q+ M+ LY Sbjct: 348 WGWAIILVTVALKALFFPLSAASYKSMAKMRVLGPRLQRMKELYGNDKVK-MQQEMMNLY 406 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 +T INPL GC PIL+QIPVF A+Y V+ S+EMR AP+ GWI+DL+A DP I Sbjct: 407 RTEKINPLGGCLPILVQIPVFIALYWVLLGSVEMRQAPWLGWIQDLSAKDPYFIL----- 461 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 PIIM +SM +QMK++P P D QA ++ MP+VF F FP+GL+ Sbjct: 462 --------------PIIMGVSMLVQMKLNPTPPDPIQAKVMMAMPIVFTFMFLWFPSGLV 507 Query: 540 IYWSWSNVISIVQQAVIMKM 559 +YW +NV+SI QQ I +M Sbjct: 508 LYWVVNNVLSIAQQWQITRM 527 >gi|311696590|gb|ADP99463.1| inner membrane protein translocase component YidC [marine bacterium HP15] Length = 571 Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 149/598 (24%), Positives = 255/598 (42%), Gaps = 64/598 (10%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN------- 51 M+ A +S ++V AW Y P E + QT DN Sbjct: 1 MDIQRIVLFAGLAIVSYLMVLAWNEDYHQPPETAQVAESQPSQTAGNMGNSDNMVLPEDS 60 Query: 52 --------------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + AV+ + ++ I+ L Y Sbjct: 61 SAQVDGDGEFTTPETGQAVISSTETTTAVSDQFITVRTDVYDLQIDRVSGNLVKARLLDY 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TP 152 ++S P+ L + N Y E + N + Sbjct: 121 DDTLNSEKPLTLLNNTQN--RLYVLESGLIGRDGPDSRKNGSAPVYSADAASYELAEGDN 178 Query: 153 TTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 + L + + N + + + + Y + V N S ++ + + G+I+R + T Sbjct: 179 QLQVDLTYTSDNGVQITKRYEFERNSYEISVKYLVENQSSEEWQANFTGKIVRDQSPDPT 238 Query: 212 N--TFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 + + G+Q G + + + + D++++ I N +N WL Y+ S ++P + Sbjct: 239 SQTSMGIQAFLGLVISSPEDPYEKFDFGDLQENQI-NQSVTNGWLAFLQHYFLSAWVPER 297 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + Q Y F ++ PG++ + G K + Sbjct: 298 DIPAQYQTTRRGPN---YVMGFVYPATSVAPGETAEIGARAYVGPKIIERLEGM-----A 349 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P + +D+GW +FI+ P+F+++ +F++LVGN+G++I+L TV VK +FF L+ Y S A Sbjct: 350 PNLDRTVDFGWLFFISLPLFIILDWFHSLVGNWGVSIILLTVLVKAVFFHLSATSYKSMA 409 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ + P++ L+E + Q + + M+ LYK INPL GC PIL+Q+PVF ++Y V+ Sbjct: 410 KMRAVAPQLTRLKELYGDD-RQRMSQEMMALYKREKINPLGGCLPILVQMPVFISLYWVL 468 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+++RHAPF WI+DL+ DP I PI+M SMF+QM + Sbjct: 469 FESVQLRHAPFMLWIQDLSVMDPYFIL-------------------PILMGASMFLQMSL 509 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 +P P D QA I+ MP++F FPAGL++YW +N++SI QQ I + AE+ Sbjct: 510 NPTPPDPMQAKIMKMMPLIFTVFFLWFPAGLVLYWLVNNILSIAQQWYITRKIEAEMA 567 >gi|332995877|gb|AEF05932.1| inner membrane protein, 60 kDa [Alteromonas sp. SN2] Length = 550 Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 257/572 (44%), Gaps = 46/572 (8%) Query: 1 MERNWNY-FVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN-------QVDN 51 ME ++ + +AL S ++ WQ Y ++++ E+ + P+ V Sbjct: 1 MESQRSFLIIGLALVSFLLWQQWQKEYGPQPVQQVQTEQAEQVSQGVPSFDDAQSEDVPT 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + A A + + +E+K L I+L G +L + + S P L Sbjct: 61 GDSVPAAKPMASASNANRIIEVKTDGLDLRIDLLGGDVITADLLKFPVTQGSEEPYSLLR 120 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVFKNANNILFE 169 S +N Y A+ + + V+ S ++ T + LV+KN + Sbjct: 121 SGNN---LYVAQSGLIGANGPDASSSGRPVYRTDSNFYEMTGDTLEVPLVWKNDQGLTVT 177 Query: 170 RTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAVLGD 226 +T +HY + TV NNS ++ + G + Sbjct: 178 KTFIFKKDHYNVAVNYTVQNNSGAAANVQQYAQLKQVIDAEDDGNMFMPTYRGAAYSTEE 237 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + + DI + W G+ + Y+ S ++P ++ + +S+ +A Sbjct: 238 DRYQKYTFDDIADDKLRE-TTKAGWAGMLEHYFVSAWVPPQDQVNTIYSRNISNQYAV-- 294 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + G++ T ++ L+ G K+ + + L ++ +D+G ++I++ + Sbjct: 295 IGVLMPAAVVNTGEAKTLSSTLYMGPKDQDKLKEIARGL-----DLTVDYGILWWISQSL 349 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+++ ++LV N+G+AI+L T+ VK + L KKQY S A M+N+ PK+ +L+++F Sbjct: 350 FSLLTFLHSLVNNWGVAIILITIVVKGAMYWLTKKQYESMARMRNLAPKMQQLKDRFGDD 409 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + ++M++LYK +NP+ GC P++LQ+P+F A+Y V+ S+E+RHA F WI DL+ Sbjct: 410 -RQKMSQSMMELYKKEKVNPMGGCLPLVLQMPIFLALYWVLMESVELRHADFALWITDLS 468 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 DP + PI+ SM++ K+ P D Q I+ +MPV Sbjct: 469 VKDPYFVL-------------------PILTGASMYLLQKLQPTTITDPMQQKIMQFMPV 509 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW SN+I++VQ +I Sbjct: 510 AMSVFFLWFPAGLVLYWLVSNIITLVQAKMIY 541 >gi|152998480|ref|YP_001343315.1| 60 kDa inner membrane insertion protein [Marinomonas sp. MWYL1] gi|189036353|sp|A6W3V1|OXAA_MARMS RecName: Full=Inner membrane protein oxaA gi|150839404|gb|ABR73380.1| 60 kDa inner membrane insertion protein [Marinomonas sp. MWYL1] Length = 551 Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 153/581 (26%), Positives = 257/581 (44%), Gaps = 56/581 (9%) Query: 5 WNYFV--AIALSV-IIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-------PNQVDNSYA 54 YF+ A+ +S ++ W Y + + ++ + A Sbjct: 4 RRYFLWGALFISGYLLFLQWSQDYGPQSTQSVAQSTQSQSETNSQMSDDLPMATQSTTEA 63 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 I ++ +E+ +L +IN G + L Y ++ P V L Sbjct: 64 NAEIPQSVTKIAPGKLIEVTTDTLRVAINPVGGDLVEAALLQYKKELGQPDPFVIL--ED 121 Query: 115 NTKNAYFAELDYVSTANNIELP-------NSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 ++ Y + V P + T + L G+ + + L + +A + Sbjct: 122 GSERTYVTQSGLVGQDGPDASPEGRPVYQSEKTAYTLADGE---NSLDVNLYYTDAKGVK 178 Query: 168 FERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN--TFGVQEGFIAVL 224 + +T Y + + TV N S + R + +I R + + G+Q + Sbjct: 179 YTKTFRFMKGKYRIRQLITVDNTSSNTWRGNLFAQIKRDNTPDPSKATSMGLQPYLGGAI 238 Query: 225 GDK--SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 D+ + +SD+++ I + W+ + Y+ S +IP + Q + D + Sbjct: 239 SDEQTKYTKVSFSDMKEDPIKT-TTTKGWVAVLQHYFVSAWIPEQGQKVTLQARTNGDFN 297 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 F+ + I PGK T ++ + G K + ++ +D+GW +++ Sbjct: 298 ---IIGFTGTSVEIAPGKQGTLSSTFYVGPKLQDHLES-----TAENLDLTVDYGWLWWL 349 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+F L++ + V N+GIAI+L V VK +FF L+ Y S A M+ P+I +L+EK Sbjct: 350 AKPLFWLLTLIQSFVINWGIAIILIVVCVKAIFFKLSAASYRSMAKMRKFGPEIAKLKEK 409 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q + + M+ LYK INPL GC PIL+Q+PVF ++Y V+ S+E+RHAPF+ WI Sbjct: 410 YGDD-RQKMSQEMMALYKKEKINPLGGCLPILVQMPVFLSLYWVLMESVELRHAPFFLWI 468 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ DP I PI+M +SMF+Q ++P P D QA I+ Sbjct: 469 HDLSVMDPYFIL-------------------PILMGISMFVQQSLNPTPPDPMQARIMKI 509 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 MPV F FPAGL++YW +N +SI+QQ VI K E Sbjct: 510 MPVAFSIFFLWFPAGLVLYWVTNNTLSILQQYVITKRIENE 550 >gi|146284522|ref|YP_001174675.1| putative inner membrane protein translocase component YidC [Pseudomonas stutzeri A1501] gi|166977401|sp|A4VS82|OXAA_PSEU5 RecName: Full=Inner membrane protein oxaA gi|145572727|gb|ABP81833.1| inner membrane protein, 60 kDa [Pseudomonas stutzeri A1501] Length = 556 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 150/582 (25%), Positives = 261/582 (44%), Gaps = 58/582 (9%) Query: 5 WNYFVAIALSV---IIVYAWQNFYVYPRIEEMNNERKNIQTV--KQPNQV----DNSYAA 55 + +AL+V ++V W Y + + + P+ N A Sbjct: 4 KRSILLVALAVVAYLMVLQWNQDYGQAALPTETAQSQPAAPALPDSPSATTEGNANDVPA 63 Query: 56 VLIDDRAQALSMS----PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPIVTL 110 V +A AL S + ++ L +I+ +G +L+L Y + P Sbjct: 64 VAGQQQASALPTSAPSSQLIRVRTDVLDLAIDPRGGDIVELHLPQYPRRQDRPDVPFQ-- 121 Query: 111 LSPSNTKNAYFAELDYVSTA-----NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 L +++ Y A+ + + + T + L G+ + L + +A+ Sbjct: 122 LFERSSERTYEAQSGLIGDGPDKASGRPQYSSEKTEYQLAEGQ---DALVVDLNY-SADG 177 Query: 166 ILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE----GF 220 + + + +L+ +Y K+ + N S G++ R K +++ G Sbjct: 178 VNYIKRFTLERGNYALKVNYLIDNQSQQPWTGYLFGQLKRDKSGDPSSSTATGTATYLGA 237 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 D+ + S+++ ++ W+ Y+ + +IP + Q + D Sbjct: 238 ALWTKDEPYRKVSMSNMDDKNLRE-TVQGGWIAWLQHYFVTAWIPQAGDTNQVQTR--KD 294 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y F+ +T+ G T L+AG K + P + +D+G + Sbjct: 295 SQGNYIIGFTGPAVTVPAGAQGETGATLYAGPKSQDKLEELS-----PGLRLTVDYGILW 349 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + L+GN+G +I++ T+ +KL FFPL+ Y S A M+ + PK+ L+ Sbjct: 350 FIAQPIFWLLQNIHALLGNWGWSIIVLTIVIKLAFFPLSAASYRSMARMRAVSPKMQALK 409 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ Sbjct: 410 EQFGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWMF 468 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM ++MFIQ +++P P D QA ++ Sbjct: 469 WITDLSIKDPYFIL-------------------PIIMGVTMFIQQQLNPTPPDPMQARVM 509 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +P++F F FPAGL++YW +N++SI QQ I + A Sbjct: 510 KLLPIIFTFFFLWFPAGLVLYWVVNNILSIAQQWYITRQIEA 551 >gi|34499859|ref|NP_904074.1| putative inner membrane protein translocase component YidC [Chromobacterium violaceum ATCC 12472] gi|81711621|sp|Q7NPT8|OXAA_CHRVO RecName: Full=Inner membrane protein oxaA gi|34332914|gb|AAQ62063.2| integral membrane protein, 60 kDa [Chromobacterium violaceum ATCC 12472] Length = 545 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 148/571 (25%), Positives = 251/571 (43%), Gaps = 49/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ + + LSV I++ W +++ + + T N + A Sbjct: 1 MDS-KRLIIFVLLSVGILFGWNEYFMPKHTPQQQAAKTQATTGAANNVAQPADANK---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 L+ R+++K + I+ G L L + P L + K Y Sbjct: 56 ----LTRGQRIQVKTDLVEAEIDTVGGDLRSLKLLKHGAAEDHKQPFQ--LFEDSAKRVY 109 Query: 121 FAELDYVSTANNIELPNSNTVWNLI--SGKILTPTTPIKLVFKNANNILFERTISLDEH- 177 A+ V+ A+N LP TV+ S ++ T +KL +AN + + + ++ Sbjct: 110 VAQTGLVA-ASNPALPTHKTVFTSDKPSYQLTGDTLEVKLTAPDANGVKVSKVYTFKKNS 168 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + + N + + R++R P+ G + + + Sbjct: 169 YEIGVRYDIVNGGAAPLAPTAYYRLLRDSQAPEGEGRMAHTYTGPAVYTSEHKFQKVSFD 228 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFI--PSKETSFHSQFKY----LSDGHARYQAK 288 D+ K + + W+ + Y+ S +I P S + L + A Sbjct: 229 DLAKGKGDYAKTTTDGWVAMLQHYFMSAWILKPLDGASVCKDERSCRFELKETAGLNSAA 288 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + T+ PGKS++ + L+AG +E+ I + E D+G FY A P+F Sbjct: 289 ALVDYATVAPGKSLSVSVPLYAGPEEYNIISKLADGM-----EYAKDFGIFYIFASPLFW 343 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + LV N+G AI+L T+ VK +F+PL Y S A MK + P+++ L+ + Sbjct: 344 LLVKLHGLVSNWGWAIVLLTLTVKAVFYPLTAASYRSMAKMKALAPRLERLKAQHGDD-R 402 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q+A++++YKT +NPL GC P+L+QIPVF +Y + S+E+R AP+ W DLA Sbjct: 403 MKFQQAVMEMYKTEKVNPLGGCLPMLIQIPVFIGLYWALLASVELRGAPWVLWYTDLARP 462 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P+IM+ +MF+Q ++PPPAD QA ++ MP+ F Sbjct: 463 DPYYIL-------------------PVIMAATMFLQTFLNPPPADPMQAKMMKIMPLAFS 503 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 FPAGL++Y+ +NV+S+ QQ I K Sbjct: 504 ALFFFFPAGLVLYYVVNNVLSMAQQWFINKQ 534 >gi|254226943|ref|ZP_04920509.1| inner membrane protein, 60 kDa [Vibrio cholerae V51] gi|125620548|gb|EAZ48916.1| inner membrane protein, 60 kDa [Vibrio cholerae V51] Length = 482 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 141/508 (27%), Positives = 237/508 (46%), Gaps = 41/508 (8%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + + + + L SI+ G L Y +++S V L + + + A+ Sbjct: 2 AAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQFIAQS 59 Query: 125 DYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLDE-HY 178 V I++ ++N +S T I + ++ AN I + +T L Y Sbjct: 60 GLVGPQG-IDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQ-ANGIDYTKTFILKRGSY 117 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDI 237 +V V NNS + + ++ + N G D + + D+ Sbjct: 118 AVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFDDM 177 Query: 238 EKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + ++S ++ + +W+ + Y+AS +IP E + +++ TI Sbjct: 178 KDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNKTI 234 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G L+ G K + P ++++D+GW +FIAKP+ L+S N Sbjct: 235 ANGDKAEFEATLWVGPKLQDQMAA-----TAPNLDLVVDYGWLWFIAKPLHWLLSVIQNF 289 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + M+ Sbjct: 290 VGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMSQEMM 348 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP I Sbjct: 349 ELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYIL-- 406 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 P++M SMF+ KMSP D Q I+ +MPV+F F FP Sbjct: 407 -----------------PLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFP 449 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +GL++YW SN+++++QQ +I K + Sbjct: 450 SGLVLYWLVSNIVTLIQQTLIYKALEKK 477 >gi|83747144|ref|ZP_00944187.1| 60 kDa inner membrane protein YIDC [Ralstonia solanacearum UW551] gi|207741912|ref|YP_002258304.1| preprotein translocase subunit yidc [Ralstonia solanacearum IPO1609] gi|83726119|gb|EAP73254.1| 60 kDa inner membrane protein YIDC [Ralstonia solanacearum UW551] gi|206593298|emb|CAQ60225.1| preprotein translocase subunit yidc [Ralstonia solanacearum IPO1609] Length = 563 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 159/577 (27%), Positives = 251/577 (43%), Gaps = 46/577 (7%) Query: 5 WNYFVAIALSVIIVYA---WQ--------NFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53 + + S+ +V WQ F P Sbjct: 4 KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGGTPAGDVPKSAATPA 63 Query: 54 AAVLI----DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 AA A S ++ + + +++ GA L L + V Sbjct: 64 AAGSQAAPATGGASQTPASEKIVVTTDVIRATVDTAGAILTKLELLTQK---DHDGNPVV 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG-KILTPTTPIKLVFK-NANNIL 167 L S + Y A + + PN TV+ +G + L + L + Sbjct: 121 LFDRS-LERTYLARSGLIGG----DFPNHTTVFTASAGPRDLGTGGEVSLTLTADKGGAK 175 Query: 168 FERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLG 225 +T Y+ VTN+ I + + R + + G Sbjct: 176 LAKTYVFKRGSYVIDTRFDVTNDGAAPISPTLYMELARDGGAVEQSRFYSTFTGPAVYTD 235 Query: 226 DKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 + +SDI+K + N W+G+ Y+AS +IP+ + Sbjct: 236 ADKFHKINFSDIDKGKAHVPAATDNGWVGMVQHYFASAWIPAASAKREFYVDRVDTN--F 293 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y+ T+ PG S++ T LFAG +E + P +++ D+GW IAK Sbjct: 294 YRIGIQEPLGTVAPGASLSATARLFAGPQEESMLEAIT-----PGLDLVKDYGWLTVIAK 348 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + L+GN+G +I+ TV VKL+FFPL+ Y S A MK++QP++ +RE+ K Sbjct: 349 PLFWLLERIHALLGNWGWSIVALTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHK 408 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 P Q + + M+ LY+T +NPL GC PIL+QIPVF ++Y + S+EMR AP+ GW+ D Sbjct: 409 GDP-QKMNQEMMTLYRTEKVNPLGGCLPILIQIPVFMSLYWALLSSVEMRGAPWVGWVHD 467 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 LAA D T FG+ VG+ PI+M++SMF+Q K++P P D QA ++ +MP Sbjct: 468 LAAPD-ALFGTYFGV---------PVGLLPILMAVSMFVQTKLNPTPPDPVQAKMMMFMP 517 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + F FP+GL++YW +N +SI QQ I +M G Sbjct: 518 LAFSVMFFFFPSGLVLYWVVNNCLSIAQQWSINRMLG 554 >gi|300115605|ref|YP_003762180.1| membrane protein insertase [Nitrosococcus watsonii C-113] gi|299541542|gb|ADJ29859.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Nitrosococcus watsonii C-113] Length = 545 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 151/574 (26%), Positives = 263/574 (45%), Gaps = 44/574 (7%) Query: 3 RNWNYFVAIALSVIIVY---AWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 N+ + AL +++ AWQ Y + + P + A L + Sbjct: 2 ENYRLILFSALVLVLFLMWDAWQTDYGPIPLIPPPPQPAASSGESSPAPPEAVPDAPLPE 61 Query: 60 ----DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 D A L +E+K L I + ++ L Y + + + VTLL + Sbjct: 62 VADMDTAPILPDQKTIEVKTDLLAIKIGMASGDLYEVQLLNYPVSLKEPNKPVTLLHKRD 121 Query: 116 -----TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 T++ A T ++ T + LI + + + L +++ N I + Sbjct: 122 PDLFVTQSGLRAASGPSITHEKVQFSAPKTHYELIEDEGI---LKVPLTWEDENGIKVTK 178 Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 T + Y + + N + + R P++ G + ++ Sbjct: 179 TYLFRRDSYQIDLNIKIENGTDQAWMGRAYAQFSRTPPESGGMFARSYVGAVFSTNEQEY 238 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + + D+ S W+ + Y+ + ++P ++ + + K++ + +RY Sbjct: 239 QKVDFGDLASKSFDR-RSPGGWVAMIQHYFVAAWVPREQGTNYYYGKHVQN--SRYIVGV 295 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + TI PG+S LF G K + + P+ + +D+G +A+P+F L Sbjct: 296 MPPQQTIAPGESGQFNLALFTGPKIQDRL-----AVVAPKLNLTVDYGKLTILAEPLFWL 350 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 MS+F+NLVGN+G AI+L T VKL+FF L++ Y S A M+ +QP++ L+E++ Q Sbjct: 351 MSWFHNLVGNWGWAIVLLTFVVKLVFFKLSQTSYRSMARMRKLQPRLLALKERYGDD-RQ 409 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +AM++LY+ +NP+ GC PI++QIPVF A+Y ++ S+E+R APF WI+DL + D Sbjct: 410 KVGQAMMELYRKEKVNPMGGCLPIVVQIPVFIALYWMLLESVELRQAPFIFWIQDLTSKD 469 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I P++M +SMF+Q K+SP P D QA ++ MPV+F Sbjct: 470 PYYIL-------------------PLLMGVSMFVQQKLSPAPTDPIQAKVMALMPVMFTV 510 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW +N++SI QQ I + E Sbjct: 511 FFVMFPAGLVLYWVVNNILSIAQQWYITRQIEQE 544 >gi|327482911|gb|AEA86221.1| putative inner membrane protein translocase component YidC [Pseudomonas stutzeri DSM 4166] Length = 556 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 150/582 (25%), Positives = 261/582 (44%), Gaps = 58/582 (9%) Query: 5 WNYFVAIALSV---IIVYAWQNFYVYPRIEEMNNERKNIQTV--KQPNQV----DNSYAA 55 + +AL+V ++V W Y + + + P+ N A Sbjct: 4 KRSILLVALAVVAYLMVLQWNQDYGQAALPTETAQGQPAAPALPDSPSATTEGNANDVPA 63 Query: 56 VLIDDRAQALSMS----PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPIVTL 110 V +A AL S + ++ L +I+ +G +L+L Y + P Sbjct: 64 VAGQQQASALPTSAPSSQLIRVRTDVLDLAIDPRGGDIVELHLPQYPRRQDRPDVPFQ-- 121 Query: 111 LSPSNTKNAYFAELDYVSTA-----NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 L +++ Y A+ + + + T + L G+ + L + +A+ Sbjct: 122 LFERSSERTYEAQSGLIGDGPDKASGRPQYSSEKTEYQLAEGQ---DALVVDLNY-SADG 177 Query: 166 ILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE----GF 220 + + + +L+ +Y K+ + N S G++ R K +++ G Sbjct: 178 VNYIKRFTLERGNYALKVNYLIDNQSQQPWTGYLFGQLKRDKSGDPSSSTATGTATYLGA 237 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 D+ + S+++ ++ W+ Y+ + +IP + Q + D Sbjct: 238 ALWTKDEPYRKVSMSNMDDKNLRE-TVQGGWIAWLQHYFVTAWIPQAGDTNQVQTR--KD 294 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y F+ +T+ G T L+AG K + P + +D+G + Sbjct: 295 SQGNYIIGFTGPAVTVPAGAQGETGATLYAGPKSQDKLEELS-----PGLRLTVDYGILW 349 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + L+GN+G +I++ T+ +KL FFPL+ Y S A M+ + PK+ L+ Sbjct: 350 FIAQPIFWLLQNIHALLGNWGWSIIVLTIVIKLAFFPLSAASYRSMARMRAVSPKMQALK 409 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ Sbjct: 410 EQFGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWMF 468 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM ++MFIQ +++P P D QA ++ Sbjct: 469 WITDLSIKDPYFIL-------------------PIIMGVTMFIQQQLNPTPPDPMQARVM 509 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +P++F F FPAGL++YW +N++SI QQ I + A Sbjct: 510 KLLPIIFTFFFLWFPAGLVLYWVVNNILSIAQQWYITRQIEA 551 >gi|70733513|ref|YP_263288.1| putative inner membrane protein translocase component YidC [Pseudomonas fluorescens Pf-5] gi|123651831|sp|Q4K395|OXAA_PSEF5 RecName: Full=Inner membrane protein oxaA gi|68347812|gb|AAY95418.1| inner membrane protein, 60 kDa [Pseudomonas fluorescens Pf-5] Length = 566 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 142/584 (24%), Positives = 246/584 (42%), Gaps = 54/584 (9%) Query: 5 WNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQ---------TVKQPNQVDNS 52 + +AL S ++V W Y + N T + + + Sbjct: 4 KRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVASSTTAPGLPDAPTGTSAANDDIPRA 63 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 + A + +++K L +++ +G L L Y L Sbjct: 64 ASDTTAPAEAPVAASKDLIQIKTDVLDLAVDPQGGDIAQLRLPLYPRRQDHPEIPFQLFD 123 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILFE 169 + + Y A+ + + P +++ +LV + + + + Sbjct: 124 -NGNERTYLAQSGLIGSNGPDASPAGRPIYSAEKKSYQLADGQDQLVVDLKFSKDGVNYI 182 Query: 170 RTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE----GFIAVL 224 + +L Y + + N S + ++ R +++ G Sbjct: 183 KRFTLKRGLYDITVSYLIDNESAQPWTGAMFAQLKRDASSDPSSSTATGTATYLGAALWT 242 Query: 225 GDKSLVEQKYSDIEKSSISNFHE------SNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + + D++K + W+ Y+ + +IP K + + Sbjct: 243 SSEPYKKVSMKDMDKVNEDKSKAPITENVQGGWVAWLQHYFVTAWIPPKGENNQVLAR-- 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 D Y ++ +T+ PG T+ L+AG K + P E+ +D+G+ Sbjct: 301 KDSKGNYIIGYTGPSMTVAPGAKAETSAILYAGPKSQAVLKELS-----PGLELTVDYGF 355 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +FIA+P+F L+ + ++LVGN+G +I+ T+ +K +FFPL+ Y S A M+ + PK+ Sbjct: 356 LWFIAQPIFWLLQHIHSLVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAA 415 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+EKF Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR APF Sbjct: 416 LKEKFGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPF 474 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DL+ DP I PIIM +MFIQ +++P P D QA Sbjct: 475 MLWITDLSIKDPFFIL-------------------PIIMGATMFIQQQLNPTPPDPMQAK 515 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 516 VMKMMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKIEA 559 >gi|114565213|ref|YP_752727.1| 60 kDa inner membrane insertion protein [Shewanella frigidimarina NCIMB 400] gi|122298224|sp|Q07VS6|OXAA_SHEFN RecName: Full=Inner membrane protein oxaA gi|114336506|gb|ABI73888.1| protein translocase subunit yidC [Shewanella frigidimarina NCIMB 400] Length = 542 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 138/565 (24%), Positives = 246/565 (43%), Gaps = 40/565 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + + QT + A + Sbjct: 1 MESQRN-ILLIGLLFVSFLMWQQWQTD-KAPKPATAQTVTQTNAASQHSADVPEADISGV 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + +K L I+ G L + ++ S+ P V L +N Y Sbjct: 59 PVELPANKNLISVKTDQLDIKISPIGGDIVYAALVEHKREIDSSDPFVILEQKNNF--TY 116 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ + N +++ + T + + N + + ++ + Sbjct: 117 IAQSGLIGRDGIDSSANGRAAYSVQTNSYSLADGKDTLTVPFTYTADNGVTYVKSFTFTR 176 Query: 177 H-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQEGFIAVLGDKSLVEQKY 234 Y + +++N S ++ G+I + ++ ++ G D + + Sbjct: 177 GQYDVGVDYSISNTSAAPLQVQMYGQIKQTIKESESSMMMPTYRGGAFSAQDTRYEKYNF 236 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D+ +++ W + Y+ S ++P S + G A F Sbjct: 237 DDMADKNLAKV-TLGGWAAMLQHYFVSAWVPPATDSNTIFSSMSAGGMAN--IGFRGAVY 293 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I PG + + + G K + +++D+G+ +++A P+ L+ ++ Sbjct: 294 DIAPGATQEINSQFYVGPKNQKELSAIS-----ETLNLVVDYGFLWWLAIPIHWLLMFYQ 348 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+L T+ V+ +PL KKQY S A M+N+QPK+ E++E+F Q + +A Sbjct: 349 SFVGNWGVAIILITLTVRGGLYPLTKKQYTSMAKMRNLQPKLTEMKERFGDD-RQKMGQA 407 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP + Sbjct: 408 MMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESYELRHAPFMLWITDLSVQDPYYVL 467 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALS 532 P++M LSMF+ KM P P D Q ++ WMPV+F Sbjct: 468 -------------------PLLMGLSMFLMQKMQPVAPTMDPMQVKMMQWMPVIFTVFFL 508 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 509 WFPAGLVLYWLVGNLVAITQQKIIY 533 >gi|94312544|ref|YP_585754.1| putative inner membrane protein translocase component YidC [Cupriavidus metallidurans CH34] gi|166977403|sp|Q1LH91|OXAA_RALME RecName: Full=Inner membrane protein oxaA gi|93356396|gb|ABF10485.1| inner membrane insertion protein YidC/OxaA [Cupriavidus metallidurans CH34] Length = 555 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 156/579 (26%), Positives = 257/579 (44%), Gaps = 57/579 (9%) Query: 5 WNYFVAIALSVIIVYAWQNFY--------VYPRIEEMNNER------KNIQTVKQPNQVD 50 + + S+ +V + N+ +P V + N + Sbjct: 4 KRTILWVIFSMSLVLLYDNWQRANGHASMFFPSANTQQAAPAGAGGATPQADVPKANATN 63 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + V +A A + +V + + I+ G L L H +P+V L Sbjct: 64 AAPGTVPAAPQAAAQPVGEKVTVTTDEVRAEIDTAGGILSRLELLNEHE--KDGAPVVLL 121 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG-KILTPT---TPIKLVFKNANNI 166 N Y A + +LPN TV+ + G + L P + L + N + Sbjct: 122 ERDVN--RTYLARSGLIGG----DLPNHTTVFTVAPGARTLAPGQDKLDVVLTAE-KNGV 174 Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVL 224 F +T + + Y+ VTN + + + R + + + G Sbjct: 175 KFVKTYTFHKGSYVVDTRFDVTNTGTAAVSPTLYLELARDGSKVEKSQFYSTFTGPAIYT 234 Query: 225 GDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + + DI K + + N W+ + Y+AS +IP + + Sbjct: 235 NADKYHKLTFEDIAKGKATVPAATDNGWVAMVQHYFASAWIPQTGKQHSFYAEQIDPN-- 292 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ + PG +++T LFAG +E + P E++ D+GW +A Sbjct: 293 LYRVGIQQPLGQLAPGATVSTDARLFAGPQEERMLEQIT-----PGLELVKDYGWLTILA 347 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ + +GN+G +I+ TV +KL+FFPL+ Y S MK++QP++ +RE+ Sbjct: 348 KPLFWLLEKLHGFLGNWGWSIIGLTVLIKLVFFPLSAASYKSMGKMKDLQPRMTAIRERH 407 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K P Q + + M+ LY+T +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ GWI Sbjct: 408 KGDP-QKMNQEMMALYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIH 466 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I PI+M++SMF+Q +++P P D QA ++ M Sbjct: 467 DLSVPDPFYIL-------------------PIVMAVSMFVQTRLNPTPPDPVQAKVMMIM 507 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P+VF F FPAGL++YW +N++SI QQ I +M G Sbjct: 508 PLVFSFMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGK 546 >gi|330812749|ref|YP_004357211.1| Sec protein secretion system, subunit YidC [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380857|gb|AEA72207.1| Putative Sec protein secretion system, subunit YidC [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 560 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 148/579 (25%), Positives = 251/579 (43%), Gaps = 50/579 (8%) Query: 5 WNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + +AL S ++V W Y + N N V N+ A+ R Sbjct: 4 KRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVAASNTAPSLPDAPVGNNAASNDDIPR 63 Query: 62 AQALSMSP----------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + + +P +++K L +I+ +G L L Y L Sbjct: 64 AASDTSAPAEAPVAVSKDLIQIKTDVLELAIDPQGGDVAQLKLPLYPRRQDHPEIPFQLF 123 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILF 168 + + Y A+ + T P +++ +LV + + + + Sbjct: 124 D-NGNERTYLAQSGLIGTNGPDSNPAGRPIYSAEKKTYQLADGQDQLVVDLKFSKDGVNY 182 Query: 169 ERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE----GFIAV 223 + +L Y + + N S + ++ R +++ G Sbjct: 183 IKRFTLKRGLYDVTVSYLIDNQSAQPWSGAMFAQLKRDASSDPSSSTATGTATYLGAALW 242 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + + D++K + W+ Y+ + +IP K S Q + D Sbjct: 243 TSSEPYKKVSMKDMDKGPLKE-TVQGGWVAWLQHYFVTAWIPQKGDSNVVQTR--KDSKG 299 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 + ++ +T PG T+ L+AG K + P E+ +D+G+ +FIA Sbjct: 300 NFIIGYTGPTLTAAPGAKAETSAILYAGPKSQAVLKELS-----PGLELTVDYGFLWFIA 354 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +P+F L+ + +++VGN+G +I+ T+ +K LFFPL+ Y S A M+ + PK+ L+E+ Sbjct: 355 QPIFWLLQHIHSIVGNWGWSIIFLTMLIKGLFFPLSAASYKSMARMRAVAPKLAALKEQH 414 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q + ++M++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR APF WI Sbjct: 415 GDD-RQKMSQSMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFMLWIT 473 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I PIIM +MFIQ +++P P D QA ++ M Sbjct: 474 DLSIKDPFFIL-------------------PIIMGATMFIQQQLNPTPPDPMQAKVMKMM 514 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P++F F FPAGL++YW +NV+SI QQ I + A Sbjct: 515 PIIFTFFFLWFPAGLVLYWVVNNVLSITQQWYITRKIEA 553 >gi|54307240|ref|YP_128260.1| putative inner membrane protein translocase component YidC [Photobacterium profundum SS9] gi|81697579|sp|Q6LW55|OXAA_PHOPR RecName: Full=Inner membrane protein oxaA gi|46911660|emb|CAG18458.1| Putative inner membrane protein, 60 kDa [Photobacterium profundum SS9] Length = 538 Score = 452 bits (1162), Expect = e-124, Method: Composition-based stats. Identities = 144/574 (25%), Positives = 255/574 (44%), Gaps = 52/574 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + IAL + +Q + + P+ + E++ + P+ + Sbjct: 1 MDSQRN-ILLIALLFVSFLLYQQWNMDNSPQPQGQGTEQQVNNSGDVPSHSGDGQPIP-- 57 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 Q + + + L S++ G + L Y+ ++ S + L Sbjct: 58 ---DQETTSKDLITINTDVLALSVDTLGGDVIEAKLLAYNNELDSADSFILL--KDEPGL 112 Query: 119 AYFAELDYVSTAN------NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 +Y A+ + +L + + L G+ + + + + I + +T Sbjct: 113 SYIAQSGLIGANGIDSANGRAQLAVTAKDFTLADGQ---DELRVPMTYV-KDGITYTKTF 168 Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLV 230 L + Y + T+ N S ++ ++ + T G + Sbjct: 169 VLKRNSYAVDVEYTIDNQSASAASVQMYAQLRQNLMDDGGSLTMPTYRGGAYSTDTTNYK 228 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + D++ S+ N +N W + Y+ S +IP E + + Y + Sbjct: 229 KYSFDDMQDKSL-NMTTTNGWAAMLQHYFVSAWIPRSEEASNL---YTRASNGLGYIGVR 284 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 TI G T T L+ G K + +L + +D+GW +FIA P+ L+ Sbjct: 285 LPTTTIAAGTEQTLTATLWVGPKLQKEMEATAANLN-----LTVDYGWLWFIASPLHKLL 339 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 S+ ++VGN+G+AIM+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 340 SFIQSIVGNWGLAIMMLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERLGDD-RQR 398 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M++LYK +NPL GC PI+LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 399 MSQEMMELYKKEKVNPLGGCLPIVLQMPIFIALYWSLMESVELRHSPFFGWIHDLSAQDP 458 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I P++M +SMF+ KMSP D Q I+ +MPV+F F Sbjct: 459 YYIL-------------------PLLMGVSMFMIQKMSPTTVTDPMQQKIMTFMPVMFTF 499 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SNV++++QQ +I + + Sbjct: 500 FFLFFPSGLVLYWLVSNVVTLLQQTLIYRSLEKK 533 >gi|229520178|ref|ZP_04409605.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TM 11079-80] gi|229342772|gb|EEO07763.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TM 11079-80] Length = 482 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 140/508 (27%), Positives = 237/508 (46%), Gaps = 41/508 (8%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + + + + L SI+ G L Y +++S V L + + + A+ Sbjct: 2 AAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQFIAQS 59 Query: 125 DYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLDE-HY 178 V I++ ++N +S T I + ++ AN I + +T L Y Sbjct: 60 GLVGPQG-IDVTSNNRPAYQVSADSFTLAEGQDELHIPMTYQ-ANGIDYTKTFILKRGSY 117 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDI 237 +V V NNS + + ++ + N G D + + D+ Sbjct: 118 AVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFDDM 177 Query: 238 EKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + ++S ++ + +W+ + Y+AS +IP E + +++ TI Sbjct: 178 KDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNKTI 234 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G L+ G K + P ++++D+GW +FIAKP+ L+S + Sbjct: 235 ANGDKAEFEATLWVGPKLQDQMAA-----TAPNLDLVVDYGWLWFIAKPLHWLLSVIQSF 289 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + M+ Sbjct: 290 VGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMSQEMM 348 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP I Sbjct: 349 ELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYIL-- 406 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 P++M SMF+ KMSP D Q I+ +MPV+F F FP Sbjct: 407 -----------------PLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFP 449 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +GL++YW SN+++++QQ +I K + Sbjct: 450 SGLVLYWLVSNIVTLIQQTLIYKALEKK 477 >gi|222112701|ref|YP_002554965.1| yidc translocase/secretase [Acidovorax ebreus TPSY] gi|221732145|gb|ACM34965.1| YidC translocase/secretase [Acidovorax ebreus TPSY] Length = 569 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 140/588 (23%), Positives = 242/588 (41%), Gaps = 55/588 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-------- 52 M + + +V W + ++ + QT P + Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQIHNGNKATFFPTPPAQTASTPAVAASGAGAADVPV 60 Query: 53 ----------YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 A RV + L S + +G L Y Sbjct: 61 AAASATPGAAPQPPAGASVPPAAIPRERVTVSTDVLRLSFDSEGGSLVHGELLQYPEMED 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVF 160 P LL + Y A+ + P T ++ G ++ + + F Sbjct: 121 KTKPF--LLLDESASRVYVAQTGLIGNGAGGAFPTHKTPMAVVPGPRELQDGQNELTVRF 178 Query: 161 KNAN--NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFG 215 ++A+ + +T +L Y + V N + ++ R KP ++ + Sbjct: 179 ESADMGGVKLVKTWTLKRGAYDVAVKHEVVNTGTAPVSPQLYLQLARDGNKPAGESSFYS 238 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 G K + ++ DIE + SN ++ + Y+A+ ++ + Sbjct: 239 TFTGPAVYTEAKKYHKVEFKDIENGKAEIDKSSSNGYVAMVQHYFATAWLLGDGVQRDNF 298 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 + + Y I PG+S LFAG + + P E++ Sbjct: 299 VRKVDTN--LYSVGMITPLGEIAPGQSKAVDARLFAGPQIETLLEKL-----APGLELVK 351 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GW +AKP++ L+ + ++GN+G +I+ +K+ F+ L K Y S A MK I P Sbjct: 352 DYGWLTILAKPLYWLLDQLHKVLGNWGWSIVALVFLLKIAFYWLNAKAYASMAKMKAINP 411 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +I E+RE+ K PQ +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+EMR Sbjct: 412 RIMEMRERLK-DKPQQMQQEMMRIYREEKVNPMGGCLPIMIQIPVFIALYWVLLSSVEMR 470 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 +AP+ GWIKDL++ DP I P++M+LS +Q ++P P D Sbjct: 471 NAPWIGWIKDLSSPDPFFIL-------------------PLLMTLSSLLQTALNPAPPDP 511 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP++F FPAGL++YW +N++SI QQ +I G Sbjct: 512 MQAKMMWLMPLMFSVMFFFFPAGLVLYWLTNNILSIAQQWIINTRMGV 559 >gi|126208888|ref|YP_001054113.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae L20] gi|126097680|gb|ABN74508.1| inner membrane protein OxaA [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 493 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 141/518 (27%), Positives = 255/518 (49%), Gaps = 41/518 (7%) Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A+ A+ + V L++ L +I+ G +L ++ +++S +P L + Sbjct: 3 AASNANTVIAENATQGKTVTLESDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQT 62 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILF 168 + T Y A+ V N I+ + + + + + F+ + +L+ Sbjct: 63 GATT---YVAQSGLVG-KNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFE-KDGVLY 117 Query: 169 ERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGD 226 +T L Y + V N + + P G+I +++ + T G + Sbjct: 118 TKTFVLKRGSYDVAVNFNVKNQTAATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAE 177 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + + + D+EK+++ + + W+ + Y+ S ++P+++ + + Sbjct: 178 TNYKKYSFQDMEKANL-DINTKAGWVALLQHYFVSAWVPNQDAENTIYSRT---NNGIAT 233 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + TI P T T+ L+ G K+ + +L ++ +D+GW +FIAKP+ Sbjct: 234 IGYRGPVTTIAPNSEATITSQLWTGPKDQKEMEATAANL-----DLTVDYGWAWFIAKPL 288 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+++ ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+RE+F Sbjct: 289 FALLTFIQSIVTNWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGDD 348 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+ Sbjct: 349 -RQRMSQEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLS 407 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A DP I P++M SMF+ KMSP P D Q ++ +MPV Sbjct: 408 AQDPYYIL-------------------PLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPV 448 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +F FP+GL++YW SN+I+IVQQ +I + + Sbjct: 449 MFTVFFLWFPSGLVLYWLTSNIITIVQQWLIYRNLEKK 486 >gi|194291287|ref|YP_002007194.1| inner membrane protein translocase component yidc [Cupriavidus taiwanensis LMG 19424] gi|254772772|sp|B3R883|OXAA_CUPTR RecName: Full=Inner membrane protein oxaA gi|193225122|emb|CAQ71133.1| preprotein translocase, cooperates with SecYEG and SecDFyajC translocon, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 559 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 152/582 (26%), Positives = 254/582 (43%), Gaps = 59/582 (10%) Query: 5 WNYFVAIALSVIIVYAWQNFY--------VYPRIEEMNNERKNI-----------QTVKQ 45 + + S+ +V + N+ +P + + Q Sbjct: 4 KRTILWVIFSMSLVLLYDNWQRANGHASMFFPSTTQQQAASAPAASGAAAQGDVPKANVQ 63 Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 P ++ A +A A ++ + ++ I+ G L L H + Sbjct: 64 PATGTSAAPAAGAAPQAAAQPTGEKIVVTTDTVRAEIDTAGGIVSRLELLKEHE---KDG 120 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG-KILTPTTPIKLVFKNA- 163 V L N + Y A + +LPN TV+ G + L +++V Sbjct: 121 KPVVLFERDNVR-TYMARSGLIGG----DLPNHTTVFTAAPGPRALDGAEQVQVVLTGEK 175 Query: 164 NNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFI 221 N + +T + Y+ VTN + + + R + + + G Sbjct: 176 NGVKLVKTYTFRKGSYVVDSKFDVTNAGTAPVSPTLYLELARDGSKVEQSQFYSTFTGPA 235 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI K + +N W+ + Y+AS +IP + + Sbjct: 236 IYTDADKYHKLSFEDIAKGKATVPAAANNGWVAMVQHYFASAWIPQTGKEHSFYVQQIDP 295 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y+ + PG +++T LFAG +E + P E++ D+GW Sbjct: 296 N--LYRVGIQQPLGELAPGATVSTDARLFAGPQEEHMLEKI-----APGLELVKDYGWLT 348 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 +AKP+F L+ + +GN+G +I+ TV +KL+FFPL+ Y S MK++QP++ +R Sbjct: 349 ILAKPLFWLLEKLHGFLGNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIR 408 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E++K P Q + + M+ LY+T +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ G Sbjct: 409 ERYKNDP-QKMNQEMMALYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLG 467 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PI+M++SMF+Q K++P P D QA ++ Sbjct: 468 WIHDLSVPDPFYIL-------------------PIVMAVSMFVQTKLNPTPPDPVQAKVM 508 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP+VF FPAGL++YW +N++SI QQ I +M G Sbjct: 509 MIMPLVFSVMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGK 550 >gi|207727482|ref|YP_002255876.1| preprotein translocase subunit yidc [Ralstonia solanacearum MolK2] gi|206590719|emb|CAQ56331.1| preprotein translocase subunit yidc [Ralstonia solanacearum MolK2] Length = 563 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 159/577 (27%), Positives = 251/577 (43%), Gaps = 46/577 (7%) Query: 5 WNYFVAIALSVIIVYA---WQ--------NFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53 + + S+ +V WQ F P Sbjct: 4 KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGGTPAGDVPKSAATPA 63 Query: 54 AAVLI----DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 AA A S ++ + + +++ GA L L + V Sbjct: 64 AAGSQAAPATGGASQTPASEKIVVTTDVIRATVDTAGAILTKLELLTQK---DHDGNPVV 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG-KILTPTTPIKLVFK-NANNIL 167 L S + Y A + + PN TV+ +G + L + L + Sbjct: 121 LFDRS-LERTYLARSGLIGG----DFPNHTTVFAASAGPRNLGTGGEVSLTLTADKGGAK 175 Query: 168 FERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLG 225 +T Y+ VTN+ I + + R + + G Sbjct: 176 LAKTYVFKRGSYVIDTRFDVTNDGAAPISPTLYMELARDGGSVEQSRFYSTFTGPAVYTD 235 Query: 226 DKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 + +SDI+K + N W+G+ Y+AS +IP+ + Sbjct: 236 ADKFHKINFSDIDKGKAHVPAATDNGWVGMVQHYFASAWIPAASAKREFYVDRVDTN--F 293 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y+ T+ PG S++ T LFAG +E + P +++ D+GW IAK Sbjct: 294 YRIGIQEPLGTVAPGASLSATARLFAGPQEESMLEAIT-----PGLDLVKDYGWLTVIAK 348 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + L+GN+G +I+ TV VKL+FFPL+ Y S A MK++QP++ +RE+ K Sbjct: 349 PLFWLLERIHALLGNWGWSIVALTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHK 408 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 P Q + + M+ LY+T +NPL GC PIL+QIPVF ++Y + S+EMR AP+ GW+ D Sbjct: 409 GDP-QKMNQEMMTLYRTEKVNPLGGCLPILIQIPVFMSLYWALLSSVEMRGAPWVGWVHD 467 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 LAA D T FG+ VG+ PI+M++SMF+Q K++P P D QA ++ +MP Sbjct: 468 LAAPD-ALFGTYFGV---------PVGLLPILMAVSMFVQTKLNPTPPDPVQAKMMMFMP 517 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + F FP+GL++YW +N +SI QQ I +M G Sbjct: 518 LAFSVMFFFFPSGLVLYWVVNNCLSIAQQWSINRMLG 554 >gi|254237758|ref|ZP_04931081.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126169689|gb|EAZ55200.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 565 Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats. Identities = 141/591 (23%), Positives = 251/591 (42%), Gaps = 77/591 (13%) Query: 15 VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS------ 68 ++++ Y P + + Q + + + V + A S + Sbjct: 4 LLVLIDRNKDYGQPELPAASASMNTTQGLPDTPSASGTSSDVPTAQSSAAGSEAADKPVA 63 Query: 69 ---PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPIVTLLSPSNTKNAYFAEL 124 +++K L +I+ +G L L Y + + P L + + Y A+ Sbjct: 64 VSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFP--LFDNGRERTYLAQS 121 Query: 125 DYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 +A ++ + + L G+ + L F + + + + + + Sbjct: 122 GLTGADGPDASSAGRPLFHSAQSSYQLADGQ---NELVVDLSF-SHDGVNYIKRFTFHRG 177 Query: 178 ----------------------YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-- 213 Y + + N S + ++ R ++T Sbjct: 178 LKADCSDKEKAQKKIECINENAYQVGVSYLIDNQSGKTWSGNLFAQLKRDGSADPSSTTA 237 Query: 214 --FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 G D + D++K W+ Y+ + ++P+K Sbjct: 238 TGVSTYLGAAVWTPDSPYKKISTKDMDKEQFKE-SVQGGWVAWLQHYFVTAWVPTKGEQH 296 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 + DG Y F+ +++ G + T L+AG K + + K+L+ P E Sbjct: 297 QVMTR--KDGQGNYIVGFTGPTLSVPAGSKVETDLTLYAGPK----LQKHLKELS-PGLE 349 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + +D+G+ +FIA+P+F L+ + ++L+GN+G +I+ TV +KL FFPL+ Y S A M+ Sbjct: 350 LTVDYGFLWFIAQPIFWLLQHIHSLIGNWGWSIIALTVLIKLAFFPLSAASYRSMARMRA 409 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + PK+ ++E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+ Sbjct: 410 VSPKMQAIKEQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESV 468 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 EMR AP+ GWI DL+ DP I PI+M +M IQ ++P P Sbjct: 469 EMRQAPWLGWITDLSVKDPFFIL-------------------PIVMGGTMLIQQMLNPTP 509 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 D QA ++ MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 510 PDPMQAKVMKLMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKIEA 560 >gi|104784447|ref|YP_610945.1| putative inner membrane protein translocase component YidC [Pseudomonas entomophila L48] gi|123079038|sp|Q1I2H4|OXAA_PSEE4 RecName: Full=Inner membrane protein oxaA gi|95113434|emb|CAK18162.1| Preprotein translocase subunit YidC [Pseudomonas entomophila L48] Length = 561 Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats. Identities = 147/584 (25%), Positives = 252/584 (43%), Gaps = 59/584 (10%) Query: 5 WNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQT------VKQPNQVDNSYAA 55 + +AL S ++V W Y + N N + + Sbjct: 4 KRTILIVALAIVSYVMVLKWNQDYGQAALPTQNTAASTANASLPDSVPAGNNGANADLPS 63 Query: 56 VLIDDRAQALSMSP------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 V + L+ +P +++K L +I+ G L L + Sbjct: 64 VNAQNGTTGLAPAPVAVSKDLIQVKTDVLNLAIDPVGGDIVQLTLPKFPRRQDHPEIPFQ 123 Query: 110 LLSPSNTKNAYFAELDYVSTANNIE------LPNSNTVWNLISGKILTPTTPIKLVFKNA 163 L + + Y A+ + T + L G+ + L F + Sbjct: 124 LFD-NGGERVYLAQSGLIGTDGPDRASGRPLYATEQKSYQLADGQ---DQLVVDLKF-SE 178 Query: 164 NNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE---- 218 N + + + SL Y + + N S + ++ R +++ Sbjct: 179 NGVNYIKRFSLKRGEYDLTVSYLIDNQSAQAWSGNMFAQLKRDASSDPSSSTATGTATYL 238 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G + + D++K + + + W+ Y+ + +IPSK + Q + Sbjct: 239 GAALWTASEPYKKVSMKDMDKGGLQE-NVAGGWVAWLQHYFVTAWIPSKSDNNAVQTR-- 295 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 D Y ++ + + G + T+ L+AG K + P E+ +D+G+ Sbjct: 296 KDSQGNYIIGYTGPALNVPAGGKVETSAMLYAGPKIQSKLKELS-----PGLELTVDYGF 350 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ + Sbjct: 351 LWFIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAQ 410 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+E+F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ Sbjct: 411 LKERFGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPW 469 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DL+ DP I PIIM +MFIQ +++P P D QA Sbjct: 470 MLWITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAK 510 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 511 VMKMMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRSIEA 554 >gi|213650173|ref|ZP_03380226.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 484 Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats. Identities = 134/513 (26%), Positives = 237/513 (46%), Gaps = 44/513 (8%) Query: 75 NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS-----T 129 L +IN +G + L Y ++ SN P L + + Y A+ Sbjct: 1 TDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIYQAQSGLTGRDGPDN 58 Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTN 188 N P N + + + + +A F +T Y + +V N Sbjct: 59 PANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFKRGDYAVNVNYSVQN 118 Query: 189 NSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSS 241 + S G++ + T ++ F + G D+ + K+ I + Sbjct: 119 TGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNE 178 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 N W+ + +Y+A+ +IP + + + F + G+ + A + + PG++ Sbjct: 179 NLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAIGYKAQPVLVQPGQT 236 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 T+ L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G Sbjct: 237 GAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWG 291 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Q + M+ LYK Sbjct: 292 FSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRQSQEMMALYKA 350 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP I Sbjct: 351 EKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSAQDPYYIL------- 403 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLII 540 PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++ Sbjct: 404 ------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVL 451 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 Y+ SN+++I+QQ +I + + GL R + Sbjct: 452 YYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 483 >gi|50086619|ref|YP_048129.1| putative inner membrane protein translocase component YidC [Acinetobacter sp. ADP1] gi|49532593|emb|CAG70307.1| Inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase [Acinetobacter sp. ADP1] Length = 583 Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 153/596 (25%), Positives = 262/596 (43%), Gaps = 68/596 (11%) Query: 3 RNWNYFVAIALSV----IIVYAWQNFYVYPRIEEMNNERK------------NIQTVKQP 46 + W F + +++ AWQ Y + + T Sbjct: 2 QQWARFAILGAMFVTAYLLILAWQKDYGHANTAVQPQAAAVVSHDVSADLPNSQSTAAAS 61 Query: 47 NQVDNSYAAVLIDDRAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + V + A A + + S + + ++ IN KG + L + +S+ Sbjct: 62 SDVPQANIAAQQTPAATSTAASQQLISIQTDLYHLWINPKGGDIVRIELLNHDQSKNSDQ 121 Query: 106 PIVTLLSPSNTKNAYFAELDYVS-------TANNIELPNSNTVWNLISGK-------ILT 151 P V L S+ K Y A+ + + + L K L Sbjct: 122 PFVML--ESDAKRTYVAQSGLIGLNGPDSSRGGRPVFDVEKSAYTLTDAKETKDKDGKLV 179 Query: 152 PTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH----- 205 T + +V+K + + + + + Y + V N S + G+I R Sbjct: 180 KTLTVPMVYKTTDGVEIIKRFTFKQGDYPIVVSYQVVNRSPQNWQGQMFGQIKRDNSEDP 239 Query: 206 -KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 K T G G ++ + K+++ + N W+ + Y+ S +I Sbjct: 240 GKSDQGIFTLGTFLGGAWGTPEEHYNKLKFANFSDEKL-NVEAKGGWVAMVQHYFVSAWI 298 Query: 265 PS--KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 P + ++ ++ + F++ I + GK++T ++G K I Sbjct: 299 PGHFGDQAYTAKLESRKSADNMNIIGFTSPTINVPAGKTMTVDATFYSGPK----IQSEL 354 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 KDLA+ +D+GW + IAK +F+ + +F+N+VGN+G +I+L TV VKL+ +PL+ K Sbjct: 355 KDLAV-GLNQTVDYGWLWPIAKLLFIGLQFFHNIVGNWGWSIILLTVLVKLILWPLSSKS 413 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y S A M+ I P++ ++E+F + + Q M+ LYK +NPL+GC P+LLQ+P+F A Sbjct: 414 YRSMAKMRVIAPEMQRMKEEFGEDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPIFLA 472 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y V+ S+E+RHAP+ WI+DL+A DP I P++M +MF Sbjct: 473 LYWVLMESVELRHAPWMLWIQDLSAMDPWFIL-------------------PLLMGATMF 513 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 IQ ++P PAD QA + MP++F + FPAGL++YW +N I+I QQ I K Sbjct: 514 IQQMLNPQPADPMQAKVFRIMPIIFTVFMLFFPAGLVLYWIVNNTITITQQWFINK 569 >gi|114322029|ref|YP_743712.1| protein translocase subunit yidC [Alkalilimnicola ehrlichii MLHE-1] gi|122310593|sp|Q0A4L5|OXAA_ALHEH RecName: Full=Inner membrane protein oxaA gi|114228423|gb|ABI58222.1| protein translocase subunit yidC [Alkalilimnicola ehrlichii MLHE-1] Length = 562 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 139/556 (25%), Positives = 250/556 (44%), Gaps = 44/556 (7%) Query: 18 VYAWQNFYVYPRIEEMNNERK---NIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELK 74 +W+ P E E + D + DRA+ + RV + Sbjct: 20 WTSWERDTRAPVATEEVVEAEDDVPAPAETPDEAPDPADGETPARDRAE-VEDERRVRVV 78 Query: 75 NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE 134 + I+ +G ++L + + ++P + + + A+ + ++N Sbjct: 79 TDLMDLEISTRGGDIRRVDLLQHGTTATDDTPFRLMADDRDP--LFIAQTGLIDDSDN-- 134 Query: 135 LPNSNTVWNLISGKILT----PTTPIKLVFKNAN-NILFERTISLD-EHYLFKIVDTVTN 188 P+ ++ + ++L + + N I R ++ + Y+ + V N Sbjct: 135 RPDHRALFRAERDEYRLSEGEDEIQVRLTWADENRGIEVARVYTVQRDSYVIDVRHQVRN 194 Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFG--VQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 ++ R ++ R+ T + G D + + D++ +S+S Sbjct: 195 AGDEEWRGYSYFQLRRNPDPPGTTPWYIYTFTGGSIYSPDDRFEKISFDDMDDTSLSR-D 253 Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTN 306 + W + Y+ +IP + + ++ + Y S+ T+ PG N Sbjct: 254 IRDGWAAMIQHYFLGAWIPPESQAL--RYYTRAQAGNEYVLGMSSGRQTVQPGGEAEFVN 311 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 LF G KE + + + +D+G+ +AKP+F L+ ++VGN+G+AI+L Sbjct: 312 RLFVGPKEQDRLRELHDSMT-----LSVDYGFLTVLAKPLFWLLDNIQDIVGNWGVAIIL 366 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 T+ +KL F+ L+ Y S A M+ +QP++ +L+E+ Q L +AM++LYK INP Sbjct: 367 VTLLIKLAFYKLSATSYRSMAKMRRVQPRMQQLKERHGDDK-QALNQAMMELYKKEKINP 425 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 L GC PIL+QIPVF A+Y V+ S+E+RHAPF WI+DL++ DP + Sbjct: 426 LGGCLPILVQIPVFIALYWVLLESVELRHAPFMLWIQDLSSRDPYFVL------------ 473 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 P++M +MF+Q +++P P D Q I+ +P+VF FPAGL++YW +N Sbjct: 474 -------PLLMGATMFLQQRLNPAPLDPIQQRIMMALPIVFTGFFMLFPAGLVLYWLVNN 526 Query: 547 VISIVQQAVIMKMHGA 562 +SI QQ IM+ A Sbjct: 527 GLSIAQQWYIMRNLEA 542 >gi|120556799|ref|YP_961150.1| putative inner membrane protein translocase component YidC [Marinobacter aquaeolei VT8] gi|166975875|sp|A1U7J4|OXAA_MARAV RecName: Full=Inner membrane protein oxaA gi|120326648|gb|ABM20963.1| protein translocase subunit yidC [Marinobacter aquaeolei VT8] Length = 567 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 148/597 (24%), Positives = 250/597 (41%), Gaps = 66/597 (11%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN----------- 47 M+ A +S ++V AW Y P+ E++ + + + + Sbjct: 1 MDIQRIVLFAGLAIVSYLMVLAWNEDYHQPQTEQVAEAQSSSDSSATNSTDDMILPEDNN 60 Query: 48 ------QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 + + + + + I+ G D +L Y + Sbjct: 61 AGGEEFATPETGSLASTSANSDQDLADRFITVTTDVYELKIDRVGGNVVDSSLLQYDESL 120 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVS--------TANNIELPNSNTVWNLISGKILTPT 153 S P+ L + + Y E + + L G+ Sbjct: 121 DSEQPLKLLTN--TSTRTYLLESGLIGRDGPDGSQAGEAPVFQAETGSYQLAEGE---DE 175 Query: 154 TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212 I LV+ + + + L + Y + + N S + + G+I+R + T+ Sbjct: 176 LTINLVYTTDSGVAITKRYHLARNSYQIDVSYLIDNRSESPWQGNFTGKIVRDQAPDPTS 235 Query: 213 TFGV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 + G + + + + D+ + + N +N WL Y+ + +IP ++ Sbjct: 236 QASMGIRAYLGMVISTPEDPYEKYDFEDLSEKRV-NQSVTNGWLAFLQHYFLTAWIPERD 294 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 Q D H F T+ PG++ + G K + P Sbjct: 295 QKAQFQTTRRGDLHV---MGFVYPATTVAPGETAEVGATAYVGPKIIDRLEAL-----AP 346 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + +D+GW +FI+ P+F ++ +FY LVGN+G+AI+L TV VK +FF L+ Y S A Sbjct: 347 NLDRTVDFGWLFFISLPLFYILEWFYGLVGNWGVAIILLTVLVKAVFFHLSATSYRSMAK 406 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ + P++ L+E + Q + + M+ LYK INPL GC PIL+Q+PVF ++Y V+ Sbjct: 407 MRAVAPQLTRLKELYGDD-RQRMSQEMMALYKREKINPLGGCLPILVQMPVFISLYWVLF 465 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S+++RHAPF WI+DL+ DP I PI+M SMFIQM ++ Sbjct: 466 ESVQLRHAPFMLWIQDLSQMDPYFIL-------------------PILMGASMFIQMSLN 506 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P P D QA I+ MP++F FPAGL++YW +N++SI QQ I + AE Sbjct: 507 PTPPDPMQAKIMKLMPLIFTVFFLWFPAGLVLYWLVNNILSISQQWYITRKIEAETA 563 >gi|77166533|ref|YP_345058.1| 60 kDa inner membrane insertion protein [Nitrosococcus oceani ATCC 19707] gi|254435359|ref|ZP_05048866.1| 60Kd inner membrane protein [Nitrosococcus oceani AFC27] gi|123593186|sp|Q3J6L8|OXAA_NITOC RecName: Full=Inner membrane protein oxaA gi|76884847|gb|ABA59528.1| protein translocase subunit yidC [Nitrosococcus oceani ATCC 19707] gi|207088470|gb|EDZ65742.1| 60Kd inner membrane protein [Nitrosococcus oceani AFC27] Length = 545 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 153/574 (26%), Positives = 265/574 (46%), Gaps = 44/574 (7%) Query: 3 RNWNYFVAIALSVIIVY---AWQNFY---VYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 N+ + AL +++ AWQ Y + P V ++ Sbjct: 2 ENYRLILFSALVLVLFLMWDAWQTDYGPIPLLPPPPQPTASSGESSPVLPEAVPDAPPPE 61 Query: 57 LID-DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + D D A L+ +E+K L I + ++ L Y + + + VTLL + Sbjct: 62 MADMDTAPILTGQKTIEVKTDLLAIKIGMASGDLYEVQLLNYPVSLKKPNEPVTLLHKRD 121 Query: 116 -----TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 T++ A T ++ T + LI + + + L +++ N I + Sbjct: 122 PDLFVTQSGLRAASGPSITHETVQFSAPKTYYELIEDES---SLKVPLTWEDENGIKVTK 178 Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 T + Y + + N + + R P++ G + ++ Sbjct: 179 TYIFQRDSYQIDLNIKIENGTDQAWMGRAYAQFSRTPPESGGMFARSYVGAVFSTQEQEY 238 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + + D+ S S W+ + Y+ + ++P ++ + + K++ + +RY A Sbjct: 239 QKVDFGDLASQSFDR-RSSGGWVAMIQHYFVAAWVPREQGTNYYYGKHVQN--SRYIAGV 295 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + TI PG+S LF G K + P+ + +D+G +A+P+F L Sbjct: 296 MPPQQTIAPGESGQFNLALFTGPKIQDQLAAV-----APKLNLTVDYGKLTILAEPLFWL 350 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 MS+F+NLVGN+G AI+L T VKL+FF L++ Y S A M+ +QP++ L+E++ Q Sbjct: 351 MSWFHNLVGNWGWAIVLLTFVVKLVFFKLSQTSYRSMARMRKLQPRLLALKERYGDD-RQ 409 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +AM++LY+ +NP+ GC PI++QIPVF A+Y ++ S+E+R APF WI+DL + D Sbjct: 410 KVGQAMMELYRKEKVNPMGGCLPIVVQIPVFIALYWMLLESVELRQAPFIFWIQDLTSKD 469 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I P++M +SMF+Q K+SP P D QA ++ MPV+F Sbjct: 470 PYYIL-------------------PLLMGVSMFVQQKLSPAPTDPIQAKVMALMPVMFTV 510 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW +N++SI QQ I + E Sbjct: 511 FFVMFPAGLVLYWVVNNILSIAQQWYITRQIEQE 544 >gi|322515695|ref|ZP_08068668.1| YidC/Oxa1 family membrane protein insertase [Actinobacillus ureae ATCC 25976] gi|322118240|gb|EFX90532.1| YidC/Oxa1 family membrane protein insertase [Actinobacillus ureae ATCC 25976] Length = 542 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 142/553 (25%), Positives = 259/553 (46%), Gaps = 44/553 (7%) Query: 18 VYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPS 77 WQ + E ++ Q D A+ A+ + + +++ Sbjct: 20 FTQWQQDFN---PEIQAQKQAQQQAQVASQSSDVPAASNANTVIAENATQGKTITIQSDV 76 Query: 78 LIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPN 137 L +I+ G +L ++ +++S +P L + + T Y A+ V N I+ Sbjct: 77 LRLTIDTLGGDVIASDLLAHNAELNSETPFKLLQTGATT---YVAQSGLVG-KNGIDTNT 132 Query: 138 SNTVWNLISGKILTPTTP----IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSID 192 + + + + + F+ + +L+ +T L Y + V N S Sbjct: 133 GRPQYQVAQEAFVLADGQNKISVPMTFE-KDGVLYTKTFVLKRGSYDVAVNFNVKNQSAQ 191 Query: 193 QIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251 I P G++ +++ + T G + + + + ++ K ++ N W Sbjct: 192 AIEVQPYGQLKHTLVESSGSLTMPTYTGGAYSSSETNYKKYSFDEMAKENL-NIGTKAGW 250 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 + + Y+ S ++P+++ + + + + P T T+ L+ G Sbjct: 251 VAVLQHYFVSAWVPNQDAQNSLYSRT---NNGIATIGYRGPVTEVAPNSEATITSQLWTG 307 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 K+ + L ++ +D+GW +FIAKP+F L+++ ++V N+G+AI+ T+ V Sbjct: 308 PKDQKEMEATAATL-----DLTVDYGWAWFIAKPLFALLTFIQSIVTNWGLAIIGVTLVV 362 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 K++ +PL K QY S A M+ +QPKI E+RE+F Q + + M++LYK +NP+ GC Sbjct: 363 KMILYPLTKAQYTSMAKMRMLQPKIQEMRERFGDD-RQRMSQEMMKLYKDEKVNPMGGCL 421 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP I Sbjct: 422 PILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIL----------------- 464 Query: 492 IWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 P++M SMF+ KMSP P AD Q ++ +MPV+F FP+GL++YW SN+I+I Sbjct: 465 --PLLMGGSMFLLQKMSPTPVADPVQKKVMTFMPVLFTVFFLWFPSGLVLYWLTSNLITI 522 Query: 551 VQQAVIMKMHGAE 563 QQ +I + + Sbjct: 523 AQQWLIYRNLEKK 535 >gi|120613420|ref|YP_973098.1| protein translocase subunit yidC [Acidovorax citrulli AAC00-1] gi|120591884|gb|ABM35324.1| protein translocase subunit yidC [Acidovorax citrulli AAC00-1] Length = 565 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 138/587 (23%), Positives = 251/587 (42%), Gaps = 57/587 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNERKNIQTVKQPNQVD 50 M + + +V W F+ P ++ + + Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQVHNGHKATFFPEPVPAQVASAPAGGGASAPGSVPT 60 Query: 51 NSYAAVLIDDRAQALSMS-------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 S A + + + RV + L + + +G L GY Sbjct: 61 PSAAPAAGTQQVPGGTAAAAPAAPRERVTVTTDVLRLTFDSEGGTLTHGELLGYPDMADK 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIKLVFK 161 + P L + + Y A+ + AN P T ++ G + I + F+ Sbjct: 121 SRPFTLL--DDSAQRVYVAQTGLIGGAN---YPTHKTPMTVVPGNRTLQDGQNDISIRFE 175 Query: 162 NAN--NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGV 216 + + + +T ++ Y + V N + +++R KP ++ + Sbjct: 176 SPDLGGVKLVKTWTVKRGAYDIAVKHEVVNTGTTPVSPQLYMQLVRDGNKPPGESSFYST 235 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G + + ++ DIE + +N ++ + Y+A+ ++ + Sbjct: 236 FTGPAVYTEARKYHKVEFKDIESGKAEIDKSSTNGYVAMVQHYFATAWLLADGIQRDLFV 295 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + + Y + I PG+S T LFAG + + P E++ D Sbjct: 296 RKVDTN--LYSVGMITSVGEIAPGQSKTLDARLFAGPQIETMLEKLS-----PGLELVKD 348 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +AKP++ L+ + ++ N+G +I+ + +K+ F+ L K Y S A MK I PK Sbjct: 349 YGWLTILAKPLYWLLEQLHKILNNWGWSIVGLVLLLKIAFYWLNAKAYASMAKMKAINPK 408 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I E+RE+ K PQ +Q+ M+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+EMR+ Sbjct: 409 IMEMRERLK-DKPQQMQQEMMRIYREEKVNPMGGCFPIMIQIPVFIALYWVLLSSVEMRN 467 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 AP+ GWI DL++ DP I P++M+ S +Q ++P P D Sbjct: 468 APWIGWIHDLSSPDPFFIL-------------------PLLMTASSLLQTALNPAPPDPM 508 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ +MP++F FPAGL++YW +N++SI QQ +I K G Sbjct: 509 QAKMMWFMPLIFSVMFFFFPAGLVLYWLTNNILSIAQQWIINKRMGV 555 >gi|229593497|ref|YP_002875616.1| putative inner membrane protein translocase component YidC [Pseudomonas fluorescens SBW25] gi|259515713|sp|C3K1G2|OXAA_PSEFS RecName: Full=Inner membrane protein oxaA gi|229365363|emb|CAY53750.1| putative inner membrane protein [Pseudomonas fluorescens SBW25] Length = 560 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 149/580 (25%), Positives = 249/580 (42%), Gaps = 58/580 (10%) Query: 5 WNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + +AL S ++V W Y + N + N+ +A Sbjct: 4 KRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVATNQAAPAIPDTPLGNNASASADVPS 63 Query: 62 AQALSMSPR----------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + +P + +K L +I+ +G L L Y L Sbjct: 64 ANGETSAPLETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLF 123 Query: 112 SPSNTKNAYFAELDYVSTAN-------NIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 + + Y A+ T + L G+ + L F + + Sbjct: 124 D-NGGERTYLAQSGLTGTNGPDARATGRPVYSTEQKTYQLADGQ---NQLNVDLKF-SLD 178 Query: 165 NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE----G 219 + + + S Y K+ + N S + ++ R +++ G Sbjct: 179 GVNYIKRFSFTRGLYDLKVTYLIDNESGKPWSGNLFAQLKRDASSDPSSSTATGTATYLG 238 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 ++ + DI+K S+ W+ Y+ + +IP+K + Q + Sbjct: 239 AALWTSNEPYKKVSMKDIDKGSLKE-TVQGGWVAWLQHYFVTAWIPNKGDANLVQTR--K 295 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 D Y F+ +T+ PG T+ L+AG K + P E+ +D+G+ Sbjct: 296 DSQGNYIIGFTGPALTVAPGAKAETSATLYAGPKSQAVLKELS-----PGLELTVDYGFL 350 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +FIA+P+F L+ + +++VGN+G +I+ T+ +K +FFPL+ Y S A M+ + PK+ L Sbjct: 351 WFIAQPIFWLLQHIHSIVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAAL 410 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR APF Sbjct: 411 KEQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFM 469 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+ DP I PIIM +MFIQ +++P P D QA + Sbjct: 470 LWITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKV 510 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + MP++F F FPAGL++YW +NV+SI QQ I + Sbjct: 511 MKMMPIIFTFFFLWFPAGLVLYWVVNNVLSISQQWYITRK 550 >gi|307825357|ref|ZP_07655576.1| membrane protein insertase, YidC/Oxa1 family domain containing [Methylobacter tundripaludum SV96] gi|307733532|gb|EFO04390.1| membrane protein insertase, YidC/Oxa1 family domain containing [Methylobacter tundripaludum SV96] Length = 585 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 150/593 (25%), Positives = 262/593 (44%), Gaps = 65/593 (10%) Query: 3 RNWNYFVAIALSVIIVY---AWQNFY-VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 N + + + ++++ AWQ Y P + + P+ S Sbjct: 17 DNIRFILIVTFAMLVFMLQQAWQLDYGPKPEVAAITEPVATNTKEDLPSATGASAQTETA 76 Query: 59 DDRAQAL-----SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS----------- 102 + A+ S + + +K L I+LKG +L+L Y ++ S Sbjct: 77 EPNTAAVPLATMSSANIITVKTDVLALQIDLKGGTIQNLDLLTYPIEKSNTVVDKLRAMI 136 Query: 103 ------SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI----LTP 152 N+ V L + S+ + + A+ ++ + P+ +TV+ Sbjct: 137 GLSVAEKNTAPVRLFN-SSQEKLFVAQSGLIADSGFATAPSHHTVFKNEQTNYDLQPGQD 195 Query: 153 TTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 + + L + + N + + + Y + V N+S ++++ T+ Sbjct: 196 SLTVPLTWTDNNGLTITKLFTFKRGSYDITLEQKVKNDSAKPWSGRQYSQLLKAPDTTSK 255 Query: 212 NTFGV-----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 +G + + + + D+ ++ + W + Y+AS +IP Sbjct: 256 GGMLTGGMRAYDGGVIYTEKEKYQKISFDDMSDENL-DVATKGGWTALIQHYFASAWIPP 314 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + H K L+DGH Y + +T+ LFAG K P + Sbjct: 315 ADQENHFYTKVLNDGH--YVIGTYSAPVTVNANSDAQFVAQLFAGPKIQPMMEKI----- 367 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P E+ +D+ + FI KP++ L++ ++ GN+G+AI+ T+ +KLLFFPL++ Y S Sbjct: 368 APGLELTVDYSFLTFIGKPIYWLLNQIHDAAGNWGVAIIGVTLCIKLLFFPLSQSSYKSM 427 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ IQP++ EL+E+F P+ M+ LYK +NPL GC PIL+QIPVF +Y V Sbjct: 428 AKMRKIQPRLKELQERFADDRPR-FNTEMMALYKKEKVNPLGGCLPILVQIPVFMCLYWV 486 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 +S ++E RHAPF WI+DL++ DP + P+IM ++M IQ Sbjct: 487 LSETVEFRHAPFILWIQDLSSQDPFYVL-------------------PVIMGITMKIQQS 527 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++P P D QA ++ P+VF FPAGL++YW +N +SI+QQ+ I K Sbjct: 528 LNPAPIDPIQAKVMKMFPIVFTIFFLFFPAGLVLYWVVNNTLSIIQQSYITKQ 580 >gi|58698973|ref|ZP_00373828.1| 60 kd inner-membrane protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58534513|gb|EAL58657.1| 60 kd inner-membrane protein [Wolbachia endosymbiont of Drosophila ananassae] Length = 549 Score = 448 bits (1153), Expect = e-123, Method: Composition-based stats. Identities = 206/521 (39%), Positives = 318/521 (61%), Gaps = 15/521 (2%) Query: 51 NSYAAVLIDDRAQALSMS--PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 N A ++ +R++ ++ + RV L N + GSI+LKGA+FDDL L YHL+ SS+SP V Sbjct: 28 NDLAPIIHQNRSEIINSTREQRVSLTNNMIKGSISLKGARFDDLILTNYHLEPSSSSPQV 87 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 LLSP+ +K+ YFAE ++ +N I++P+S VW + L + N N ILF Sbjct: 88 VLLSPAESKDVYFAEFGWLDPSNKIKVPDSKAVWRADK----LNQKEVNLSWDNENGILF 143 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 I+LD++Y+FK+ V NN+ D + P G+I R + + + EG + D Sbjct: 144 RMKINLDDNYMFKVEQVVENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAF-DNK 202 Query: 229 LVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGH-ARYQ 286 L E Y DI K + + S +W G +DKYW +V IP K + K+ + ++Q Sbjct: 203 LEEWTYKDISKKHLIKANTSEKNWFGFADKYWLTVIIPEKSDKINVSIKHTNANDIDKFQ 262 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 F + +ILPG S + N+ FAGAK+ + Y+ L IP F+ +D+G YFI KP+ Sbjct: 263 VDFVKSYKSILPGASTSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPV 322 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + YVS +K++QP++ ++E +K Sbjct: 323 FLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKVKSLQPELTRVKELYKND 382 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + K I L+K +N+NP++ +P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL+ Sbjct: 383 SLK-QHKETIALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFFLWIKDLS 441 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWM 523 A DPTNIFTLFG+ + P + +GI PII +M IQ K+S D Q ++ ++ Sbjct: 442 APDPTNIFTLFGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFL 499 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P + VF SSFPAGL+IYW +SN+I+++QQ++I ++ Sbjct: 500 PYISVFIFSSFPAGLVIYWIFSNIITLIQQSLIKLFLTKKV 540 >gi|254427853|ref|ZP_05041560.1| 60Kd inner membrane protein [Alcanivorax sp. DG881] gi|196194022|gb|EDX88981.1| 60Kd inner membrane protein [Alcanivorax sp. DG881] Length = 582 Score = 448 bits (1153), Expect = e-123, Method: Composition-based stats. Identities = 150/612 (24%), Positives = 249/612 (40%), Gaps = 80/612 (13%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYV---YPRIEEMNNERKNIQTVKQP--------- 46 ME + +S +++ AWQ + P E E+ + + Sbjct: 1 MEIQRALVITGIAVVSYLMIQAWQRDHADSATPVPVEQVAEQGSPSSADSADLPAPQPET 60 Query: 47 ------NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 Q D D + S R+E+ L IN G L L Y Sbjct: 61 ENSIPAAQADGDQPVAPQIDTPDTATSSRRIEVSTDVLRVEINPVGGDIVRLALPDYPKH 120 Query: 101 VS-SNSPIVTLLSPSNTKNAYFAELDYVS------TANNIELPNSNTVWNLISGKILTPT 153 + + P V + Y A+ V + ++ + L G + Sbjct: 121 IDTPDQPFV--FMDQSNSGTYVAQSGLVGKNGTDSSKGRPHWSSAQQSYQLAEG---SNE 175 Query: 154 TPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212 + L N + + YL ++ V NN + G+I R Sbjct: 176 LNVDLTLTQDNGAEIIKRYTFEKGSYLVRVSHIVRNNGSSPWTGALYGQIKRDGSDDPGL 235 Query: 213 T------FGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIP 265 + G +K + + D+ + + + WL + Y+ S +IP Sbjct: 236 STTGFAPMPTYLGAAYWNPEKPYNKLTFDDMSEDGVKLDQTVEGGWLAMVQHYFVSAWIP 295 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + H YL +Y +F + T+ PG+ +AG K+ + Sbjct: 296 DAKQKNHYSSVYLQ-SRDQYLLRFVSPNTTVQPGEESVLYAEFYAGPKQQDNLEAIS--- 351 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL--------------VGNFGIAIMLTTVFV 371 P M +D+GW +FI++P+F L+ + + VGN+G+AI+L T + Sbjct: 352 --PGLNMTVDYGWLWFISQPIFALLVFLQSGEVSVFGMDIDIGGGVGNWGVAIILLTFII 409 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 K +FF L+ Y S A M+ + P++ ++E+ K Q Q + L+K INPL GC Sbjct: 410 KAIFFKLSATSYRSMAKMRKVAPEMQRIKEQNKNDK-QKQQMETMNLFKREKINPLGGCL 468 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 P+L+Q+PVF A+Y V+ S+E+R APF+ WI DL+ DP + Sbjct: 469 PMLVQMPVFIALYYVLLESVELRQAPFFLWINDLSVMDPYFVL----------------- 511 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 PI+M SMF+Q +++P PAD QA ++ WMP++F + FPAGL++YW +N++SI Sbjct: 512 --PILMGASMFLQTRLNPTPADPTQAQVMKWMPMIFAVFMLWFPAGLVLYWLTNNILSIA 569 Query: 552 QQAVIMKMHGAE 563 QQ +I + E Sbjct: 570 QQWIITRKIENE 581 >gi|91777106|ref|YP_546862.1| protein translocase subunit yidC [Methylobacillus flagellatus KT] gi|122399286|sp|Q1GXL6|OXAA_METFK RecName: Full=Inner membrane protein oxaA gi|91711093|gb|ABE51021.1| protein translocase subunit yidC [Methylobacillus flagellatus KT] Length = 552 Score = 448 bits (1153), Expect = e-123, Method: Composition-based stats. Identities = 157/593 (26%), Positives = 273/593 (46%), Gaps = 54/593 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV---- 56 M+ + + S I+ W ++ + + + Q+V+ + + ++ Sbjct: 1 MD-TKRLILFVIFSFSILMLWDSWQRDQQPPAASQTQTTAQSVEDGSVPQAAKSSASAAN 59 Query: 57 ---LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + + L + R+ ++ SI+ G L LR + D V L+ Sbjct: 60 QASVPAETGFRLQSAERINVETDLYKASIDTIGGDLRRLELREHKDDEDQTKNFV-LMDD 118 Query: 114 SNTKNAYFAELDYVSTA---NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 + Y A+ + + + +T + L G+ ++L +K N + + Sbjct: 119 QSAPMLYVAQTGLIGNGLPTHKEVFTSESTNYQLAPGE---DKLDVRLTWKGDNGVEVHK 175 Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKS 228 + + Y ++ + NNS + S +I+ + + G Sbjct: 176 IYTFRRDSYAIEVSYEIRNNSDTAVDPSVYYQIVHDNQSHQGSYMMPTFTGGAYYTEADK 235 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + +SD+ K+++S + S+ W+G+ Y+ S +IP K LSD Y Sbjct: 236 YKKLSFSDMAKTNLSK-NASDGWVGLVQHYFVSAWIPEDGLVREFYTKKLSDN--VYSIG 292 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + I PG+S+T + L+AG + + P E +D+GW IA P+F Sbjct: 293 SVSPLGNIAPGQSVTLKSRLYAGPQTQSELKSV-----APGLEYTVDYGWLTVIATPLFW 347 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++S +V N+G+AI+L T+ +KL+F+PL+ Y S ANM+ + P++ L+E++ Sbjct: 348 ILSSIQKVVHNWGVAIILLTILIKLVFYPLSAASYRSMANMRELAPRLQRLKEQYGDD-R 406 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q L +AM+++YKT INP+ GC PIL+QIPVF A+Y V+ S+EMRHAPF WI+DL+A Sbjct: 407 QKLHQAMMEMYKTEKINPMGGCLPILVQIPVFIALYWVLLGSVEMRHAPFMLWIQDLSAV 466 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + PI+M ++M IQ K++P PAD QA ++ MP+VF Sbjct: 467 DPYYVL-------------------PILMGITMIIQTKLNPKPADPIQAKVMTIMPIVFS 507 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 FPAGL++YW +N++SI QQ I + R+ K N++ Sbjct: 508 VFFFFFPAGLVLYWLVNNILSIAQQWYINRSTE---------RAAAKKKGNAR 551 >gi|91795120|ref|YP_564771.1| 60 kDa inner membrane insertion protein [Shewanella denitrificans OS217] gi|123356330|sp|Q12HM8|OXAA_SHEDO RecName: Full=Inner membrane protein oxaA gi|91717122|gb|ABE57048.1| protein translocase subunit yidC [Shewanella denitrificans OS217] Length = 541 Score = 448 bits (1152), Expect = e-123, Method: Composition-based stats. Identities = 137/568 (24%), Positives = 244/568 (42%), Gaps = 47/568 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + + V D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQTDNAPQVAAPQTQVKSHVSAETSSDVPEADGSVST 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ++ + + + L+ IN G L + ++ N P + L ++ Y Sbjct: 60 --AVVASTNLINVTTDQLVIKINPLGGDIVYAALVKHKTEIDKNDPFILL--EQSSDFNY 115 Query: 121 FAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + T + +++ ++L + + L + + + + Sbjct: 116 IAQSGLIGRDGIDSSTKGRAQFTTTSSDFSLADDQ---DKLTVPLTLVTDTGVRYTKVFT 172 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVE 231 + + V N S ++ G+I + KP + G D + Sbjct: 173 FTRGQFDVGVDYQVNNTSDKSLQLQMYGQIKQTIKPTEGSMMMPTYRGAAFSTSDVRYEK 232 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D+ ++S W + Y+ S +IP + + G A F Sbjct: 233 YDFEDMADMNLSK-STLGGWAAMLQHYFVSAWIPPATDANTIFSSVSAGGFAN--IGFRG 289 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + PG + + + G K+ + +++D+G+ +++A P++ L+ Sbjct: 290 AVYDVAPGSEQSISAQFYVGPKDQKALSAIS-----ETLNLVVDYGFLWWLAIPIYKLLM 344 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 F +LV N+GIAI+L T+ V+ L +PL K QY S A M+N+QPK+ +++E+F Q + Sbjct: 345 IFQSLVTNWGIAIILITLTVRGLLYPLTKAQYTSMAKMRNLQPKLADMKERFGDD-RQKM 403 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 404 GQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESYELRHAPFMLWINDLSVQDPY 463 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVF 529 + P++M +SM++ KM P P D Q ++ WMPV+F Sbjct: 464 YVL-------------------PLLMGVSMWLMQKMQPIAPTMDPMQVKMMQWMPVIFTV 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 505 FFLWFPAGLVLYWLVGNLVAITQQKIIY 532 >gi|239993746|ref|ZP_04714270.1| inner membrane protein, 60 kDa [Alteromonas macleodii ATCC 27126] Length = 552 Score = 448 bits (1152), Expect = e-123, Method: Composition-based stats. Identities = 146/572 (25%), Positives = 268/572 (46%), Gaps = 46/572 (8%) Query: 1 MERNWNY-FVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME ++ + +AL S ++ +WQ Y + + ++ + P+ +N V Sbjct: 1 MESQRSFLIIGLALVSFLLWQSWQKDYGPQPVVPVEQQQTQETSQGVPSFNENGSEDVPS 60 Query: 59 DDRAQAL-------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 D A S + +E+K +L I+L G +L + ++ S+ P L Sbjct: 61 SDSVPAAQPIAAAQSSNRIIEVKTDTLDLRIDLLGGDVVSADLLKFPVEQGSDIPYSLLR 120 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVFKNANNILFE 169 S + Y A+ + + V+N S ++ + T I L +KN + Sbjct: 121 SGNG---LYVAQSGLIGAQGPDASSSGRPVYNAQSDYYEMTSDTLVIPLTWKNNQGLSVT 177 Query: 170 RTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAVLGD 226 +T + + Y + +V N + P ++ + G D Sbjct: 178 KTFTFTKGQYDVNVSYSVENGTGSAATVQPYAQLKQVMEFEDDGNMFMPTYRGAAFSTED 237 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + + +IE ++ W+G+ + Y+ S ++PS+E + + L + +A Sbjct: 238 DRYQKYSFDEIEDDNLRE-TTKAGWVGMLEHYFVSAWVPSQEQTNTLYSRNLKNQYAV-- 294 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + ++ PG++ T + L+ G K+ ++ + L ++ +D+G ++I++P+ Sbjct: 295 IGVLSPSESVAPGETKTLASTLYMGPKDQESLAKIARGL-----DLTVDYGILFWISQPL 349 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+++ ++LV N+G+AI+L T+ VK + L KKQY S A M+N+ PK+ +L+++F Sbjct: 350 FALLTFLHSLVNNWGVAIILITIVVKGAMYWLTKKQYESMARMRNLAPKMQQLKDRFGDD 409 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + +AM++LY+ +NP+ GC P+LLQ+P+F A+Y V+ S+E+RHA F WI DL+ Sbjct: 410 -RQKMSQAMMELYRKEKVNPMGGCLPLLLQMPIFLALYWVLMESVELRHADFVLWITDLS 468 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 DP + PI+ SM++ K+ P D Q I+ WMPV Sbjct: 469 TKDPYFVL-------------------PILTGASMYLLQKLQPTTITDPMQQKIMQWMPV 509 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW SNVI++VQ +I Sbjct: 510 AMSVFFLWFPAGLVLYWLVSNVITLVQAKMIY 541 >gi|113869679|ref|YP_728168.1| putative inner membrane protein translocase component YidC [Ralstonia eutropha H16] gi|123133468|sp|Q0K5C1|OXAA_RALEH RecName: Full=Inner membrane protein oxaA gi|113528455|emb|CAJ94800.1| inner membrane protein [Ralstonia eutropha H16] Length = 555 Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 154/579 (26%), Positives = 246/579 (42%), Gaps = 57/579 (9%) Query: 5 WNYFVAIALSVIIVYAWQNFY--------VYPRIEEMNNERKNIQTVKQPNQVDNS---- 52 + + S+ +V + N+ +P + V + Sbjct: 4 KRTILWVIFSMSLVLLYDNWQRSQGHASMFFPSTTQQAASAPAASGAAAQGDVPKANVAP 63 Query: 53 ---YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 A +A A +V + ++ I+ G L L H + V Sbjct: 64 GAAGTAAPAAPQAAAQPTGEKVVVTTDTVRAEIDTAGGIVSRLELLKEHE---KDGKPVV 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT---TPIKLVFKNANNI 166 L N + Y A + +LPN TV+ G + L + N + Sbjct: 121 LFERDNVR-TYMARSGLIGG----DLPNHTTVFTAAPGPRTLDGAEQLEVALTAE-KNGV 174 Query: 167 LFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVL 224 +T Y+ VTN + + + R + + + G Sbjct: 175 KLVKTYVFRKGSYVVDTKFAVTNAGAAPVSPTLYLELARDGSKVEQSQFYSTFTGPAVYT 234 Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + + DI K + +N W+ + Y+AS +IP F Sbjct: 235 DADKYHKIDFEDIAKGKATVPAAANNGWVAMVQHYFASAWIPQTGKEH--SFYVQQIDPH 292 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ + PG ++TT LFAG +E + P E++ D+GW +A Sbjct: 293 LYRVGVQQPLGELAPGATVTTDARLFAGPQEEHMLEKI-----APGLELVKDYGWLTILA 347 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ + +GN+G +I+ TV +KL+FFPL+ Y S MK++QP++ +RE++ Sbjct: 348 KPLFWLLEKLHGFLGNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIRERY 407 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K P Q + + M+ LYKT +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ GWI Sbjct: 408 KNDP-QKMNQEMMGLYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIH 466 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I PI+M++SMF+Q K++P P D QA ++ M Sbjct: 467 DLSVPDPFYIL-------------------PIVMAVSMFVQTKLNPTPPDPVQAKVMMIM 507 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P+VF FPAGL++YW +N++SI QQ I +M G Sbjct: 508 PLVFSVMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGK 546 >gi|28872711|ref|NP_795330.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato str. DC3000] gi|38502973|sp|Q87TS1|OXAA_PSESM RecName: Full=Inner membrane protein oxaA gi|28855967|gb|AAO59025.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato str. DC3000] Length = 562 Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 147/587 (25%), Positives = 252/587 (42%), Gaps = 64/587 (10%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQ--------------TVKQPN 47 + +AL+++ W Y + N N + P+ Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASADVPS 63 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 N+ +A ++ A++ + +K L +I+ G L L Y Sbjct: 64 ATGNTTSAAPLET--PAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVP 121 Query: 108 VTLLSPSNTKNAYFAELDYVST-------ANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 L + + + A+ T + ++ + L G+ + ++L F Sbjct: 122 FQLFD-NGGERTFLAQSGLTGTNGPDARASGRPVYSSAQKSYQLADGQ---DSMVVELKF 177 Query: 161 KNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFG 215 + N + + + + Y + V N S + ++ R Sbjct: 178 -SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTA 236 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G + + DI+K I + W+ Y+ + +IP + Q Sbjct: 237 TYLGAALWTAAEPYKKVSMKDIDKGQIKE-NVQGGWVAWLQHYFVTAWIPDHNVTNAVQT 295 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + D Y F++ +++ PG TT L+AG K + P E+ +D Sbjct: 296 R--KDSQGNYIIGFTSPTLSVAPGAQGETTATLYAGPKSQAVLKELS-----PGLELTVD 348 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK Sbjct: 349 YGFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPK 408 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR Sbjct: 409 LAVLKEQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQ 467 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 AP+ WI DL+ DP I PIIM +MFIQ +++P P D Sbjct: 468 APWILWITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPM 508 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP++F F FPAGL++YW +N +SI QQA I + GA Sbjct: 509 QAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIGA 555 >gi|254788526|ref|YP_003075955.1| preprotein translocase subunit YidC [Teredinibacter turnerae T7901] gi|259515729|sp|C5BKL7|OXAA_TERTT RecName: Full=Inner membrane protein oxaA gi|237685608|gb|ACR12872.1| preprotein translocase subunit YidC [Teredinibacter turnerae T7901] Length = 560 Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 139/583 (23%), Positives = 252/583 (43%), Gaps = 60/583 (10%) Query: 5 WNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N + + +S +++ W F E + + + + + + Sbjct: 5 RNALIGGIVLVSFLLIIRWNEFQERKFEETQLQQSSANNSERVAPSIPSEQPQAPNGEEV 64 Query: 63 QALSMS---------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV-SSNSP 106 S ++ + +L I+ G L L Y+ + ++P Sbjct: 65 PDAPASDSKDAVEFTANADNDRQIHISTDTLDLVIDTNGGDIVRLALPQYYAMLHEKDNP 124 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANN------IELPNSNTVWNLISGKILTPTTPIKLVF 160 V L + N + Y A+ V +++ + L GK T + L + Sbjct: 125 FVLLNN--NDTSTYIAQSGLVGPNGTDGKNGRPRFSAASSDYTLEPGK---DTLVVDLKY 179 Query: 161 KNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN---TFGV 216 + + I + + + YL + + N + G+I R A Sbjct: 180 QQESAI-ITKRFTFHRDSYLIDLEYLIENTGDTNWVGNLYGQIKRDDHNPAQAVGVGMQP 238 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G + + + K+ ++ K + + W+ + Y+ S ++P ++ + Sbjct: 239 FLGAAITTPETNYKKLKFDELAKEKL-EVSNTGGWVAMVQHYFMSAWVPDQDKDQKYVLR 297 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 + + + + + T+ PG + + +AG K + P ++ ID+ Sbjct: 298 KSRNANMYFLSFTTLTSTTVAPGTTGSIKAQYYAGPKHIRVLEKI-----APHLDLTIDY 352 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +FIAKP+F + + + LVGN+G+AI+L T +KL+FF + Y S A M+ +QP + Sbjct: 353 SWLWFIAKPLFYALDFIHGLVGNWGLAIILLTCCIKLVFFYPSAMSYRSMAKMRKVQPLM 412 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EL+E++ Q + +++LYK +NPL GC PILLQ+PVF A+Y +I S+E+RHA Sbjct: 413 NELKERYGDD-RQRMSAELMKLYKKEKVNPLGGCLPILLQMPVFIALYWMIMESVELRHA 471 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 PF+ WI DL+ DP + P+IM ++M+IQ K++P PAD Q Sbjct: 472 PFFLWIHDLSVRDPYFVL-------------------PLIMGVTMWIQQKLNPTPADPMQ 512 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 A ++ MP F FPAGL++YW +N +SI QQ +I + Sbjct: 513 AKVMQLMPFFFTALFMMFPAGLVLYWVVNNTLSITQQYIITRQ 555 >gi|186477842|ref|YP_001859312.1| putative inner membrane protein translocase component YidC [Burkholderia phymatum STM815] gi|254772761|sp|B2JJR8|OXAA_BURP8 RecName: Full=Inner membrane protein oxaA gi|184194301|gb|ACC72266.1| 60 kDa inner membrane insertion protein [Burkholderia phymatum STM815] Length = 550 Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 151/581 (25%), Positives = 253/581 (43%), Gaps = 49/581 (8%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS------ 52 M+ I ++ WQ + P + + + P + Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATQTKTAAPAAPGSSTTASQPTDL 60 Query: 53 --YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 A A + V G I+ +G L L + ++TL Sbjct: 61 PQTTAAAPGSTTPAAQQAQLVSFSTDVYRGQIDTRGGTLSKLTLVK-PGEGKQPDQVITL 119 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT-TPIKLVFKNA--NNIL 167 + + Y A + + PN V+ ++G+ T + L F++ + Sbjct: 120 FDHT-ADHTYLARTGLLGG----DFPNHTDVFTPVAGQATDMTGNTLTLSFQSPEKGGLK 174 Query: 168 FERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLG 225 +T + Y+ + + N ++ + ++R T F G Sbjct: 175 VVKTYTFTRGSYVINVDTKIQNVGTAPVKPTAYMELVRDSQPVETPRFSHTFIGPAVYTE 234 Query: 226 DKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 + + DI+K+ + N W+ + Y+AS +IP + + + + Sbjct: 235 QHHFQKLTFGDIDKNKQDYATSADNGWVAMVQHYFASAWIPQQGAKRDIYVEKIDP--SL 292 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y+ TI PG++I + LFAG +E + P E++ D+GW IAK Sbjct: 293 YRVGVKQPLQTIAPGQTIDVSARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAK 347 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK Sbjct: 348 PLFWLLEKIHGYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFK 407 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI D Sbjct: 408 SDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHD 466 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I P++M++SMF+Q K++P P D QA ++ +MP Sbjct: 467 LSQQDPYFIL-------------------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMP 507 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + F FPAGL++Y+ +NV+SI QQ I +M G + Sbjct: 508 IAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGQKKK 548 >gi|262374715|ref|ZP_06067987.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter junii SH205] gi|262310371|gb|EEY91463.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter junii SH205] Length = 585 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 150/598 (25%), Positives = 257/598 (42%), Gaps = 70/598 (11%) Query: 3 RNWNYFVAIALSV----IIVYAWQNFYVYPRIEEMNNERKNIQ---TVKQPNQVDNSYAA 55 + W F + +++ AWQ Y + + + PN + + A+ Sbjct: 2 QQWARFAILGAMFVTAYLLILAWQKDYGHAQPAPQQQAAAVTTHEVSADLPNAQNATAAS 61 Query: 56 VLIDDRAQALSMSPR-------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 L A + + + +K IN KG + L + S P V Sbjct: 62 DLPQANVTASQTTEKPSVNQQLISVKTDLYHLWINPKGGDIVRVELLSHDESKDSEKPFV 121 Query: 109 TLLSPSNTKNAYFAELDYVS-------TANNIELPNSNTVWNLISGKILTPT-------T 154 L S+ K Y A+ + + T + L K +T Sbjct: 122 ML--ESDAKRTYVAQSGLIGLNGPDSSRSGRPTYDVEKTTYTLADAKSITTQDEKKQQVL 179 Query: 155 PIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT---- 209 + LVFK + ++ + + Y + V N S + G++ R Sbjct: 180 TVPLVFKTPEGVEIIKSFTFTQGDYPITVKHQVINRSQQNWQGQMFGQLKRDNSDDPGKS 239 Query: 210 --ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-- 265 T G G ++ + K+ + + N W+ I Y+ S +IP Sbjct: 240 SQGIFTLGTYLGGAWGTPEEHYNKLKFENFNDEKL-NVEAKGGWVAIVQHYFVSAWIPGN 298 Query: 266 -----SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 + + ++ + F++ I + G S+ L++G K + Sbjct: 299 LKLTQADGQPYTAKLESRQSTDGMNIIGFTSPVINVPAGTSMEVDAKLYSGPKIQSELKD 358 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 L +D+GW + IAK +F+ + +F+NLVGN+G +I+L T+ VKL+ +PL+ Sbjct: 359 LADGLN-----QTVDYGWLWPIAKLLFLGLQFFHNLVGNWGWSIILLTILVKLILWPLSS 413 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 K Y S A M+ I P++ ++E+F + + Q M+ LYK +NPL+GC P+LLQ+P+F Sbjct: 414 KSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPIF 472 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y V+ S+E+RHAP+ GWI+DL+A DP I P+IM ++ Sbjct: 473 LALYWVLMESVELRHAPWLGWIQDLSAMDPWFIL-------------------PLIMGVT 513 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M++Q ++P P D QA + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 514 MYVQQMLNPQPTDPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINK 571 >gi|264680932|ref|YP_003280842.1| inner membrane insertion protein [Comamonas testosteroni CNB-2] gi|262211448|gb|ACY35546.1| inner membrane insertion protein [Comamonas testosteroni CNB-2] Length = 570 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 144/589 (24%), Positives = 259/589 (43%), Gaps = 62/589 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + +V W + ++ + QTV P D A V + Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQIHNGKKPTFFPSP--QTVSAPAAADVKPADVSVPQ 58 Query: 61 RAQALSMS-------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 A A S V + + + + + +G L Y V Sbjct: 59 PAAAASAGDVPGAANAAAQPAAAVTPRQDVIVGSDVMRLTFDSEGGTLKASELLKYSDTV 118 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIKLV 159 + ++ + N K Y + + P T ++ G+ + +++ Sbjct: 119 D-DKKLMQVF-EENAKRVYLGQTGLIGG----NFPTHKTPMTVMPGERELKDGQDSVQVR 172 Query: 160 FKNAN--NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTF 214 F++A+ + +T +L Y + V N + +++R KP+ + + Sbjct: 173 FESADQGGVKLVKTFTLKRGSYAVDVQHDVVNTGSAAVNPQLYMQLVRDGNKPEHESTFY 232 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHS 273 G K + ++ DIE + SN ++ + Y+AS ++ + + Sbjct: 233 STFTGPAVYTEAKKYHKVEFKDIENGKAEVDKASSNGYVAMVQHYFASAWLLADGIQRDN 292 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + + D Y T+ PG++ T ++ LF+G + P + P E++ Sbjct: 293 FVRKVGDN--LYAVGMITPVGTVEPGQTKTVSSRLFSGPQVEPMLEKLS-----PGLELV 345 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 D+GW +AKP++ L+S + +GN+G +I+ V +K+ F+ L K Y S A MK I Sbjct: 346 KDYGWLTILAKPLYWLLSELHKFIGNWGWSIVALVVLLKIAFYWLNAKAYSSMAKMKAIN 405 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P+I E+RE+ K PQ +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+E+ Sbjct: 406 PRIQEMRERLK-DKPQQMQQEMMRIYREEKVNPMGGCLPIVIQIPVFMALYWVLQSSVEI 464 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R+AP+ GWI DL+ DP I P++M+LS +Q ++P P D Sbjct: 465 RNAPWIGWIHDLSVPDPFFIL-------------------PLLMTLSSLLQTALNPAPPD 505 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP++F FP+GL++YW +N++SI QQ +I K G Sbjct: 506 PMQAKMMWIMPLMFSVMFFFFPSGLVLYWLTNNILSIAQQWIINKRMGV 554 >gi|146309633|ref|YP_001190098.1| putative inner membrane protein translocase component YidC [Pseudomonas mendocina ymp] gi|166977399|sp|A4Y1A0|OXAA_PSEMY RecName: Full=Inner membrane protein oxaA gi|145577834|gb|ABP87366.1| protein translocase subunit yidC [Pseudomonas mendocina ymp] Length = 581 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 147/609 (24%), Positives = 251/609 (41%), Gaps = 82/609 (13%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + VA+A+ S ++V W Y + + A+ Sbjct: 1 MDIQRSILIVALAVVSYLMVLQWNEDYG--QAALPAEVSSSTAATPALPDTPADTASTGG 58 Query: 59 DDRAQALSMS-------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 DD A++ + +K L +I+ +G L L Y Sbjct: 59 DDIPTAVAEPTAAAVAPTAAASDELIRVKTDVLDLAIDPRGGDIVQLRLPQYPRRQDRPD 118 Query: 106 PIVTLLSPSNTKNAYFAELDYVS------TANNIELPNSNTVWNLISGKILTPTTPIKLV 159 L + ++ Y A+ + ++ + + + G+ + + L Sbjct: 119 VPFQLFD-NGSERTYLAQSGLIGQNAPDKSSGRALWSSEKQSYEMADGQ---DSLVVDLT 174 Query: 160 FKNANNILFERTISLDEH----------------------YLFKIVDTVTNNSIDQIRFS 197 + + N + + + S Y + + N S + Sbjct: 175 Y-SENGVSYIKRYSFKRGLNPQCSAREQQLKKPGCVDPSAYQVDVRYLIDNQSDQAWSGN 233 Query: 198 PRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 ++ R G D+ + DI+K S W+ Sbjct: 234 LFAQLKRDNSGDPSSTTATGTATYLGAALWTSDEPYKKVSMKDIDKQSFKE-TVQGGWVA 292 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 Y+ + ++PSK+++ Q + D Y F+ + + G T L+AG K Sbjct: 293 WLQHYFVTAWVPSKDSTNLVQTR--KDSQGNYIVGFTGPAVQVAAGAQGETGAILYAGPK 350 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + P E+ +D+G+ +F+A+P+F L+ + L+GN+G +I++ T+ +KL Sbjct: 351 LQEHLGKLS-----PGLELTVDYGFLWFLAQPIFWLLEVIHGLLGNWGWSIIVLTIIIKL 405 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 +FFPL+ Y S A M+ + PK+ L+E+ Q + +AM++LYK INPL GC PI Sbjct: 406 IFFPLSAASYRSMARMRAVSPKLQALKEQHGDD-RQKMSQAMMELYKKEKINPLGGCLPI 464 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+PVF A+Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 465 LVQMPVFLALYWVLLESVEMRQAPWMFWITDLSIKDPFFIL------------------- 505 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 PIIM +MFIQ +++P P D QA +L MP++F F FPAGL++YW +N++SI QQ Sbjct: 506 PIIMGATMFIQQQLNPTPPDPMQARVLKLMPIIFTFFFLWFPAGLVLYWVVNNILSIGQQ 565 Query: 554 AVIMKMHGA 562 I + A Sbjct: 566 WYITRKIEA 574 >gi|312964014|ref|ZP_07778485.1| preprotein translocase YidC subunit [Pseudomonas fluorescens WH6] gi|311282049|gb|EFQ60659.1| preprotein translocase YidC subunit [Pseudomonas fluorescens WH6] Length = 567 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 148/589 (25%), Positives = 252/589 (42%), Gaps = 63/589 (10%) Query: 5 WNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + +AL S ++V W Y + N + T + AA R Sbjct: 4 KRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVAANAVPTGLPDAASGTNTAASDDIPR 63 Query: 62 AQALSMSP----------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + +P +++K L +I+ +G L L Y L Sbjct: 64 AAGETKAPAEVAVATSTDLIQIKTDVLDLAIDPQGGDVAKLTLPLYPRRQDHPEIPFQLF 123 Query: 112 SPSNTKNAYFAELDYVST-------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 + + Y A+ + T A + + L G+ + L F + + Sbjct: 124 D-NGGERVYQAQSGLIGTNGPDASAAGRPIFSSEKKSYQLADGQ---DQLVVDLKF-SKD 178 Query: 165 NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE----G 219 + + + +L Y + + N S + ++ R +++ G Sbjct: 179 GVNYIKRFTLKRGLYDIVVTYLIDNQSAQPWTGAMFAQLKRDASSDPSSSTATGTATYLG 238 Query: 220 FIAVLGDKSLVEQKYSDIEK------SSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + + D++K + ++ + W+ Y+ + +IP + Sbjct: 239 AALWTSSEPYKKVSMKDMDKVAEDKLKAPITYNVNGGWVAWLQHYFVTAWIPQPGQNNAV 298 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + D Y ++ +T+ PG T+ L+AG K + P E+ Sbjct: 299 LAR--KDSKGNYIIGYTGPAMTVAPGAKAETSATLYAGPKSQAVLKELS-----PGLELT 351 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G +FIA+P+F L+ + +++VGN+G +I+ T+ +K LFFPL+ Y S A M+ + Sbjct: 352 VDYGILWFIAQPIFWLLQHIHSIVGNWGWSIIFLTMLIKGLFFPLSAASYKSMARMRAVA 411 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EM Sbjct: 412 PKLAALKEQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEM 470 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R APF WI DL+ DP I PIIM +MFIQ +++P P D Sbjct: 471 RQAPFMLWITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPD 511 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP++F F FPAGL++YW +NV+SI QQ I + A Sbjct: 512 PMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNVLSISQQWYITRKIEA 560 >gi|330964185|gb|EGH64445.1| membrane protein insertase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 562 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 147/587 (25%), Positives = 251/587 (42%), Gaps = 64/587 (10%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQ--------------TVKQPN 47 + +AL+++ W Y + N N + P+ Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASADVPS 63 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 N+ +A ++ AL+ + +K L +I+ G L L Y Sbjct: 64 ATGNTTSAAPLET--PALASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVP 121 Query: 108 VTLLSPSNTKNAYFAELDYVST-------ANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 L + + + A+ T + ++ + L G+ + ++L F Sbjct: 122 FQLFD-NGGERTFLAQSGLTGTNGPDARASGRPVYSSAQKSYQLADGQ---DSMVVELKF 177 Query: 161 KNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFG 215 + N + + + + Y + V N S + ++ R Sbjct: 178 -SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTA 236 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G + + DI+K I + W+ Y+ + +IP + Q Sbjct: 237 TYLGAALWTAAEPYKKVSMKDIDKGQIKE-NVQGGWVAWLQHYFVTAWIPDHNATNAVQT 295 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + D Y F++ +++ PG TT L+AG K + P E+ +D Sbjct: 296 R--KDSQGNYIIGFTSPTLSVAPGAQGETTATLYAGPKSQAVLKELS-----PGLELTVD 348 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK Sbjct: 349 YGFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPK 408 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR Sbjct: 409 LAVLKEQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQ 467 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 AP+ WI DL+ DP I PIIM +MFIQ +++P P D Sbjct: 468 APWILWITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPM 508 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 509 QAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 555 >gi|330961501|gb|EGH61761.1| membrane protein insertase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 562 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 146/587 (24%), Positives = 250/587 (42%), Gaps = 64/587 (10%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQ--------------TVKQPN 47 + +AL+++ W Y + N N + P+ Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASADVPS 63 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 N+ +A ++ A++ + +K L +I+ G L L Y Sbjct: 64 ATANTTSAAPLET--PAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVP 121 Query: 108 VTLLSPSNTKNAYFAELDYVST-------ANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 L + + + A+ T A ++ + L G+ + ++L F Sbjct: 122 FQLFD-NGGERTFLAQSGLTGTNGPDARAAGRPVYSSAQKTYQLADGQ---DSMVVELKF 177 Query: 161 KNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFG 215 + N + + + + Y + V N S + ++ R Sbjct: 178 -SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTA 236 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G + + DI+K I W+ Y+ + +IP + Q Sbjct: 237 TYLGAALWTAAEPYKKVSMKDIDKGQIKE-TVQGGWVAWLQHYFVTAWIPDHNATNQVQT 295 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + D Y F++ +++ PG T+ L+AG K + P E+ +D Sbjct: 296 R--KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVD 348 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK Sbjct: 349 YGFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPK 408 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR Sbjct: 409 LALLKEQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQ 467 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 AP+ WI DL+ DP I PIIM +MFIQ +++P P D Sbjct: 468 APWILWITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPM 508 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 509 QAKVMKLMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 555 >gi|331017731|gb|EGH97787.1| membrane protein insertase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 562 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 146/587 (24%), Positives = 251/587 (42%), Gaps = 64/587 (10%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQ--------------TVKQPN 47 + +AL+++ W Y + N N + P+ Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASADVPS 63 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 N+ +A ++ A++ + +K L +I+ G L L Y Sbjct: 64 ATGNTASAAPLET--PAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVP 121 Query: 108 VTLLSPSNTKNAYFAELDYVST-------ANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 L + + + A+ T + ++ + L G+ + ++L F Sbjct: 122 FQLFD-NGGERTFLAQSGLTGTNGPDARASGRPVYSSAQKSYQLADGQ---DSMVVELKF 177 Query: 161 KNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFG 215 + N + + + + Y + V N S + ++ R Sbjct: 178 -SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTA 236 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G + + DI+K I + W+ Y+ + +IP + Q Sbjct: 237 TYLGAALWTAAEPYKKVSMKDIDKGQIKE-NVQGGWVAWLQHYFVTAWIPDHNVTNAVQT 295 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + D Y F++ +++ PG TT L+AG K + P E+ +D Sbjct: 296 R--KDSQGNYIIGFTSPTLSVAPGAQGETTATLYAGPKSQAVLKELS-----PGLELTVD 348 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK Sbjct: 349 YGFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPK 408 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR Sbjct: 409 LAVLKEQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQ 467 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 AP+ WI DL+ DP I PIIM +MFIQ +++P P D Sbjct: 468 APWILWITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPM 508 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 509 QAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 555 >gi|213968445|ref|ZP_03396588.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato T1] gi|301384267|ref|ZP_07232685.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. tomato Max13] gi|302131966|ref|ZP_07257956.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926733|gb|EEB60285.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato T1] gi|330876349|gb|EGH10498.1| membrane protein insertase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 562 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 146/587 (24%), Positives = 251/587 (42%), Gaps = 64/587 (10%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQ--------------TVKQPN 47 + +AL+++ W Y + N N + P+ Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASADVPS 63 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 N+ +A ++ A++ + +K L +I+ G L L Y Sbjct: 64 ATGNTTSAAPLET--PAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVP 121 Query: 108 VTLLSPSNTKNAYFAELDYVST-------ANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 L + + + A+ T + ++ + L G+ + ++L F Sbjct: 122 FQLFD-NGGERTFLAQSGLTGTNGPDARASGRPVYSSAQKSYQLADGQ---DSMVVELKF 177 Query: 161 KNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFG 215 + N + + + + Y + V N S + ++ R Sbjct: 178 -SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTA 236 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G + + DI+K I + W+ Y+ + +IP + Q Sbjct: 237 TYLGAALWTAAEPYKKVSMKDIDKGQIKE-NVQGGWVAWLQHYFVTAWIPDHNVTNAVQT 295 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + D Y F++ +++ PG TT L+AG K + P E+ +D Sbjct: 296 R--KDSQGNYIIGFTSPTLSVAPGAQGETTATLYAGPKSQAVLKELS-----PGLELTVD 348 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK Sbjct: 349 YGFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPK 408 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR Sbjct: 409 LAVLKEQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQ 467 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 AP+ WI DL+ DP I PIIM +MFIQ +++P P D Sbjct: 468 APWILWITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPM 508 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 509 QAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 555 >gi|299530924|ref|ZP_07044338.1| inner membrane insertion protein [Comamonas testosteroni S44] gi|298721145|gb|EFI62088.1| inner membrane insertion protein [Comamonas testosteroni S44] Length = 570 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 143/589 (24%), Positives = 258/589 (43%), Gaps = 62/589 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + +V W + ++ + QTV P D A V + Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQIHNGKKPTFFPSP--QTVSAPAAADVKPADVSVPQ 58 Query: 61 RAQALSMS-------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 A A S V + + + + + +G L Y V Sbjct: 59 PAAAASAGDVPGAANAAAQPAAAVTPRQDVIVGSDVMRLTFDSEGGTLKASELLKYSDTV 118 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIKLV 159 + ++ + N K Y + + P T ++ G+ + +++ Sbjct: 119 D-DKKLMQVF-EENAKRVYLGQTGLIGG----NFPTHKTPMTVMPGERELKDGQDSVQVR 172 Query: 160 FKNAN--NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTF 214 F++A+ + +T +L Y + V N + +++R KP+ + + Sbjct: 173 FESADQGGVKLVKTFTLKRGSYAVDVQHDVVNTGSAAVNPQLYMQLVRDGNKPEHESTFY 232 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHS 273 G K + ++ DIE + N ++ + Y+AS ++ + + Sbjct: 233 STFTGPAVYTDAKKYHKVEFKDIESGKAEVDKASPNGFVAMVQHYFASAWLLADGIQRDN 292 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + + D Y T+ PG++ T ++ LF+G + P + P E++ Sbjct: 293 FVRKVGDN--LYAVGMITPVGTVEPGQTKTVSSRLFSGPQIEPMLEKLS-----PGLELV 345 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 D+GW +AKP++ L+S + +GN+G +I+ V +K+ F+ L K Y S A MK I Sbjct: 346 KDYGWLTILAKPLYWLLSELHKFIGNWGWSIVALVVLLKIAFYWLNAKAYSSMAKMKAIN 405 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P+I E+RE+ K PQ +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+E+ Sbjct: 406 PRIQEMRERLK-DKPQQMQQEMMRIYREEKVNPMGGCLPIVIQIPVFMALYWVLQSSVEI 464 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R+AP+ GWI DL+ DP I P++M+LS +Q ++P P D Sbjct: 465 RNAPWIGWIHDLSVPDPFFIL-------------------PLLMTLSSLLQTALNPAPPD 505 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP++F FP+GL++YW +N++SI QQ +I K G Sbjct: 506 PMQAKMMWIMPLMFSVMFFFFPSGLVLYWLTNNILSIAQQWIINKRMGV 554 >gi|323516074|gb|ADX90455.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii TCDC-AB0715] Length = 574 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 150/582 (25%), Positives = 255/582 (43%), Gaps = 67/582 (11%) Query: 16 IIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 +++ AWQ Y E++ + N +T + V + A A A Sbjct: 7 LLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVASDVPQANIAQSQTTDATA 66 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + ++ IN KG + L + SN P V L ++ K Y A+ Sbjct: 67 PVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPFVML--ENDAKRTYVAQS 124 Query: 125 DYVS-------TANNIELPNSNTVWNLISGKILTPT-------TPIKLVFKNANNILFER 170 + T + L K + + +VFK + + Sbjct: 125 GLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKVLTVPMVFKTPEGVEIIK 184 Query: 171 TISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT------ATNTFGVQEGFIAV 223 T + + Y + V N S + G++ R + T G G Sbjct: 185 TFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFLGGAWG 244 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSFHSQFK 276 D + K+++ + + N W+ + Y+ S +IP + + ++ + Sbjct: 245 TPDAHYNKLKFANFSEEKL-NTEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQPYVAKLE 303 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 F++ I + G S+ L++G K + KDLA+ +D+ Sbjct: 304 SRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSEL----KDLAV-GLNQTVDY 358 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ I P++ Sbjct: 359 GWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRVIAPEM 418 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++E+F + + Q M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+RHA Sbjct: 419 QRMKEEFGEDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELRHA 477 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ GWI DL+A DP I P+IM +MF Q ++P PAD Q Sbjct: 478 PWLGWIHDLSAMDPWFIL-------------------PLIMGATMFAQQMLNPQPADPMQ 518 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 A + MP++F + FPAGL++YW +N I+I+QQ I K Sbjct: 519 AKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINK 560 >gi|170729247|ref|YP_001763273.1| 60 kDa inner membrane insertion protein [Shewanella woodyi ATCC 51908] gi|254778163|sp|B1KQ65|OXAA_SHEWM RecName: Full=Inner membrane protein oxaA gi|169814594|gb|ACA89178.1| 60 kDa inner membrane insertion protein [Shewanella woodyi ATCC 51908] Length = 544 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 143/569 (25%), Positives = 250/569 (43%), Gaps = 46/569 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + + ++ T + +S Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQTDQAPQPVATQSSSVVTASSASDSHSSDVPDADSA 59 Query: 61 RAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A+ S + + LI IN G L + L++ ++ P V L ++ Sbjct: 60 LPAAVVASKDLITVNTDQLIIKINPVGGDIVYSALVEHKLELENDEPFVLLEQTNDIN-- 117 Query: 120 YFAELDYVSTAN-------NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ + +++ ++L +G+ T + L + N + + Sbjct: 118 YIAQSGLIGRDGIDSSVKGRAHFDSASRNYSLAAGQ---DTLEVPLTYVAENGATYTKMF 174 Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLV 230 + + + N + Q++ G+I K ++ G D Sbjct: 175 IFHRGKFDVDVDYVIDNKTDKQLQVQMYGQIKHSIKKSESSMMMPTYRGAAFSTQDTRYE 234 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + D+ ++ W + Y+ S ++P + G A F Sbjct: 235 KYSFEDMADKNLDK-KTLGGWAAMLQHYFVSAWVPPANDQNIIFSSISAGGQAN--IGFR 291 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + PG + T+ + G K+ + P +++D+G+ +++A P++ L+ Sbjct: 292 GAIFDVAPGATQEITSQFYVGPKDQAALSAIS-----PTLNLVVDYGFLWWLAVPIYKLL 346 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 +F ++VGN+G AI+L T+ V+ L +PL K QY S A M+N+QPK+ E++E+F Q Sbjct: 347 MFFQSIVGNWGAAIILITLTVRGLLYPLTKAQYTSMAKMRNLQPKLAEMKERFGDD-RQK 405 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI DL+ DP Sbjct: 406 MGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQDP 465 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFV 528 + PI+M +SMF+ KM P P D Q ++ WMPVVF Sbjct: 466 YYV-------------------MPILMGVSMFVMQKMQPMAPTMDPMQVKMMQWMPVVFT 506 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ I Sbjct: 507 VFFLWFPAGLVLYWLVGNLVAIAQQKYIY 535 >gi|169634939|ref|YP_001708675.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii SDF] gi|184156329|ref|YP_001844668.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii ACICU] gi|260558089|ref|ZP_05830300.1| membrane protein insertase, YidC/Oxa1 family domain [Acinetobacter baumannii ATCC 19606] gi|332873303|ref|ZP_08441258.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6014059] gi|169153731|emb|CAP02932.1| Inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase [Acinetobacter baumannii] gi|183207923|gb|ACC55321.1| Preprotein translocase subunit YidC [Acinetobacter baumannii ACICU] gi|260408443|gb|EEX01750.1| membrane protein insertase, YidC/Oxa1 family domain [Acinetobacter baumannii ATCC 19606] gi|332738509|gb|EGJ69381.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6014059] Length = 586 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 152/599 (25%), Positives = 260/599 (43%), Gaps = 71/599 (11%) Query: 3 RNWNYFVAIALSV----IIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPN 47 + W F + +++ AWQ Y E++ + N +T + Sbjct: 2 QQWARFAILGAMFVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVAS 61 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 V + A A A + ++ IN KG + L + SN P Sbjct: 62 DVPQANIAQSQTTDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPF 121 Query: 108 VTLLSPSNTKNAYFAELDYVS-------TANNIELPNSNTVWNLISGKILTPT------- 153 V L ++ K Y A+ + T + L K + Sbjct: 122 VML--ENDAKRTYVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKV 179 Query: 154 TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT--- 209 + +VFK + +T + + Y + V N S + G++ R + Sbjct: 180 LTVPMVFKTPEGVEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGK 239 Query: 210 ---ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP- 265 T G G D + K+++ + + N W+ + Y+ S +IP Sbjct: 240 SSQGIFTLGTFLGGAWGTPDAHYNKLKFANFSEEKL-NTEAKGGWVAMVQHYFVSAWIPG 298 Query: 266 ------SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 + + ++ + F++ I + G S+ L++G K + Sbjct: 299 NLKLTQANGQPYVAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSEL- 357 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 KDLA+ +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ Sbjct: 358 ---KDLAV-GLNQTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLS 413 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K Y S A M+ I P++ ++E+F + + Q M+ LYK +NPL+GC P+LLQ+P+ Sbjct: 414 SKSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPI 472 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F A+Y V+ S+E+RHAP+ GWI+DL+A DP I P+IM Sbjct: 473 FLALYWVLMESVELRHAPWLGWIQDLSAMDPWFIL-------------------PLIMGA 513 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MF Q ++P PAD QA + MP++F + FPAGL++YW +N I+I+QQ I K Sbjct: 514 TMFAQQMLNPQPADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINK 572 >gi|88811304|ref|ZP_01126560.1| 60 kDa inner membrane insertion protein [Nitrococcus mobilis Nb-231] gi|88791843|gb|EAR22954.1| 60 kDa inner membrane insertion protein [Nitrococcus mobilis Nb-231] Length = 548 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 148/571 (25%), Positives = 250/571 (43%), Gaps = 46/571 (8%) Query: 1 MERNWNY-FVAI-ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME + F+A+ A+ ++ AWQ Y PR + + +Q + + + Sbjct: 1 MENQRLFLFLALGAVLFLLWDAWQQDY-GPRPPTPQSTEQAVQAPQADGPAE--ELPTEL 57 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 +A + R+ + IN G L + +P L K Sbjct: 58 RQQAGLAAQGMRISVVTDLFAIEINTVGGGIGSAKLLKHATSTDDPAPFTLL--RDQGKP 115 Query: 119 AYFAELDY-----VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + + + + + L SG+ + LV+ N I R Sbjct: 116 LFVVQAGLRAKEGSAPGTQARFQSRQKAYQLASGE---QQLVVPLVWHGPNGITVTRRYI 172 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG--VQEGFIAVLGDKSLV 230 Y I V N S +++R + G G D Sbjct: 173 FQRGKYTIDIEQEVQNASAAPWSAYQYTQLLRGEENKTGGLAGQVAYIGGAIYSPDDKYQ 232 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + ++++ ++ N W+ + Y+ + +P + +F G + S Sbjct: 233 KISFDEMQEQALDR-TVQNGWVAMVQHYFLAAMVPPRG--MTERFYSRIVGGDLFSLGMS 289 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + TI PG+S T L+ G K+ + L E+ +D+G F IAKPMF+++ Sbjct: 290 SPWQTIQPGQSGTFQTQLYLGPKDQERMASVASGL-----ELTVDYGIFTIIAKPMFVVL 344 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 S+F+ +VGN+G AI+ TV +K +FF L++ Y S A M+ +QP++ +L+E+F Q Sbjct: 345 SWFHAVVGNWGWAIVFLTVLIKAVFFKLSETSYRSMARMRKLQPRMQQLKEQFGDD-RQR 403 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + ++ LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF W++DL+A DP Sbjct: 404 MNQELMTLYKREKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFILWLRDLSAPDP 463 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 + PIIM L+M Q +++P P D Q I+ +MPVVF Sbjct: 464 YYVL-------------------PIIMGLTMLAQQRLNPAPMDPIQQKIMLFMPVVFTGF 504 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FP GL++Y++ +N +SI+QQ +I + Sbjct: 505 FLFFPGGLVLYYTVNNSLSILQQWLITRRID 535 >gi|294138798|ref|YP_003554776.1| inner membrane protein oxaA [Shewanella violacea DSS12] gi|293325267|dbj|BAI99997.1| inner membrane protein oxaA [Shewanella violacea DSS12] Length = 544 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 142/569 (24%), Positives = 249/569 (43%), Gaps = 46/569 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N F+ I L + WQ + + + E ++ T +S Sbjct: 1 MESQRNIFL-IGLLFVSFLLWQQWQTDQAPQPVTTELTSVSTASNTTDAHSSDVPDADSA 59 Query: 61 -RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A ++ + + L+ IN G L + L+ S+ P V L + Sbjct: 60 LPAATVASKELITIHTDQLVIKINPVGGDIVYSALVEHKLEQESDEPFVLLEQTKDIN-- 117 Query: 120 YFAELDYVST-------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ + +++ + + + + T + L + N + + Sbjct: 118 YIAQSGLIGRNGIDSSVKGRAHFDSASQDYTMAADQE---TLEVPLTYVAENGAKYTKMF 174 Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQEGFIAVLGDKSLV 230 + + V N + ++ G+I +++++ G D Sbjct: 175 IFHRGQFKIDVDYLVDNTTDKPLQVQMYGQIKHSIKKSSSSMIMPTYLGAAFSTSDIRYE 234 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + K+ D+ + W + Y+ S +IP + + G A F Sbjct: 235 KYKFDDMADKDLDK-KTLGGWAAMLQHYFVSAWIPPENDQNTIFSSISAGGQAN--IGFR 291 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 I PG + T ++ + G K+ + L +++D+G+ +++A P+ L+ Sbjct: 292 GAIYDIAPGATQTISSQFYVGPKDQEALSEISDSLN-----LVVDYGFLWWLAVPINKLL 346 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 +F ++V N+G+AI+L T+ V+ + FPL K QY S A M+N+QPK+ E++E+F Q Sbjct: 347 MFFQSIVSNWGLAIILITLTVRGMLFPLTKAQYTSMAKMRNLQPKLAEMKERFGDD-RQK 405 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + +AM++LYK +NP+ GC PILLQ+P+F ++Y V+ S+E+RHAPF WI DL+ DP Sbjct: 406 MGQAMMELYKKEKVNPMGGCLPILLQMPIFISLYWVLMESVELRHAPFMLWITDLSVQDP 465 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFV 528 + PI+M +SMF+ KM P P D Q ++ WMPVVF Sbjct: 466 YYV-------------------MPILMGISMFVMQKMQPMAPTMDPMQQKMMQWMPVVFT 506 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 507 VFFLWFPAGLVLYWLVGNLVAITQQKIIY 535 >gi|300705597|ref|YP_003747200.1| cytoplasmic insertase, essential for proper integration of ATPase into the membrane [Ralstonia solanacearum CFBP2957] gi|299073261|emb|CBJ44620.1| cytoplasmic insertase, essential for proper integration of ATPase into the membrane [Ralstonia solanacearum CFBP2957] Length = 554 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 153/578 (26%), Positives = 249/578 (43%), Gaps = 57/578 (9%) Query: 5 WNYFVAIALSVIIVYA---WQ--------NFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53 + + S+ +V WQ F P Sbjct: 4 KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGGTPAGDVPKSAATPA 63 Query: 54 AAVL-----IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 AA +QAL+ S ++ + + +++ GA L L + Sbjct: 64 AAGSQAAPATGAASQALA-SEKIVVTTDVIRATVDTAGASLTKLELL----TQKDHDGNP 118 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG-KILTPTTPIKLVFK-NANNI 166 +L + + Y A + + PN TV+ +G + L + L + Sbjct: 119 MVLFDRSLERTYLARSGLIGG----DFPNHTTVFAASTGPRDLGTGGEVSLTLTADKGGA 174 Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVL 224 +T Y+ VTN+ I + + R + + G Sbjct: 175 KLAKTYVFKRGSYVIDTRFDVTNDGTAPINPTLYMELARDGGAVEQSRFYSTFTGPAVYT 234 Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + ++DI+K ++ W+ + Y+AS +IP+ + Sbjct: 235 DTDHYHKITFADIDKGKAQVPGATDSGWVAMVQHYFASAWIPAASVKREYYVDRVDTN-- 292 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ T+ PG S++ T LFAG +E + P +++ D+GW IA Sbjct: 293 FYRIGIQEPLGTVAPGASLSATARLFAGPQEARMLEGIT-----PGLDLVKDYGWLTVIA 347 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ + L+GN+G +I+ TV +KL+FFPL+ Y S A MK++QP++ +RE+ Sbjct: 348 KPLFWLLEKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRERH 407 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K P Q + + M+ LY+T +NPL GC PIL+QIPVF A+Y + S+EMR AP+ GW+ Sbjct: 408 KGDP-QKMNQEMMTLYRTEKVNPLGGCLPILIQIPVFMALYWALLSSVEMRGAPWLGWVH 466 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DLA+ DP I PI+M++SMF+Q K++P P D QA ++ +M Sbjct: 467 DLASPDPFYIL-------------------PILMAVSMFVQTKLNPTPPDPVQAKMMMFM 507 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P+ F FPAGL++YW +N +SI QQ I +M G Sbjct: 508 PLAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 545 >gi|169797810|ref|YP_001715603.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii AYE] gi|213155394|ref|YP_002317439.1| inner membrane protein OxaA [Acinetobacter baumannii AB0057] gi|215485157|ref|YP_002327398.1| Inner membrane protein oxaA [Acinetobacter baumannii AB307-0294] gi|301345949|ref|ZP_07226690.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii AB056] gi|301510086|ref|ZP_07235323.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii AB058] gi|301594676|ref|ZP_07239684.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii AB059] gi|332854709|ref|ZP_08435496.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6013150] gi|332865589|ref|ZP_08436429.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6013113] gi|169150737|emb|CAM88649.1| Inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase [Acinetobacter baumannii AYE] gi|213054554|gb|ACJ39456.1| inner membrane protein OxaA [Acinetobacter baumannii AB0057] gi|213985979|gb|ACJ56278.1| Inner membrane protein oxaA [Acinetobacter baumannii AB307-0294] gi|332727866|gb|EGJ59268.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6013150] gi|332735241|gb|EGJ66318.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6013113] Length = 586 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 152/599 (25%), Positives = 260/599 (43%), Gaps = 71/599 (11%) Query: 3 RNWNYFVAIALSV----IIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPN 47 + W F + +++ AWQ Y E++ + N +T + Sbjct: 2 QQWARFAILGAMFVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVAS 61 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 V + A A A + ++ IN KG + L + SN P Sbjct: 62 DVPQANIAQSQTTDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPF 121 Query: 108 VTLLSPSNTKNAYFAELDYVS-------TANNIELPNSNTVWNLISGKILTPT------- 153 V L ++ K Y A+ + T + L K + Sbjct: 122 VML--ENDAKRTYVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKV 179 Query: 154 TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT--- 209 + +VFK + +T + + Y + V N S + G++ R + Sbjct: 180 LTVPMVFKTPEGVEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGK 239 Query: 210 ---ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP- 265 T G G D + K+++ + + N W+ + Y+ S +IP Sbjct: 240 SSQGIFTLGTFLGGAWGTPDAHYNKLKFANFSEEKL-NTEAKGGWVAMVQHYFVSAWIPG 298 Query: 266 ------SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 + + ++ + F++ I + G S+ L++G K + Sbjct: 299 NLKLTQANGQPYVAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSEL- 357 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 KDLA+ +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ Sbjct: 358 ---KDLAV-GLNQTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLS 413 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K Y S A M+ I P++ ++E+F + + Q M+ LYK +NPL+GC P+LLQ+P+ Sbjct: 414 SKSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPI 472 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F A+Y V+ S+E+RHAP+ GWI+DL+A DP I P+IM Sbjct: 473 FLALYWVLMESVELRHAPWLGWIQDLSAMDPWFIL-------------------PLIMGA 513 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MF Q ++P PAD QA + MP++F + FPAGL++YW +N I+I+QQ I K Sbjct: 514 TMFAQQMLNPQPADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINK 572 >gi|326319557|ref|YP_004237229.1| membrane protein insertase, YidC/Oxa1 family domain-containing [Acidovorax avenae subsp. avenae ATCC 19860] gi|323376393|gb|ADX48662.1| membrane protein insertase, YidC/Oxa1 family domain containing [Acidovorax avenae subsp. avenae ATCC 19860] Length = 566 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 139/588 (23%), Positives = 249/588 (42%), Gaps = 58/588 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNERKNIQTVKQPNQVD 50 M + + +V W F+ P ++ + + Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQVHNGHKATFFPEPVPAQVASAPAGGGASAPGSVPT 60 Query: 51 NSYAAVLIDDRAQALSMS--------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 S A + + RV + L + + +G L GY Sbjct: 61 PSAAPAAGAQQVPPGGTAAAAPAAPRERVTVTTDVLRLTFDSEGGTLTHGELLGYPDMAD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIKLVF 160 + P L + + Y A+ + A P T ++ G + I + F Sbjct: 121 KSRPFTLL--DDSAQRVYVAQTGLIGGAG---YPTHKTPMAVVPGNRTLQDGQNDISIRF 175 Query: 161 KNAN--NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFG 215 ++ + + +T +L Y + V N + +++R KP ++ + Sbjct: 176 ESPDLGGVKLVKTWTLKRGAYDIAVKHEVVNTGTTPVSPQLYMQLVRDGNKPPGESSFYS 235 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 G K + ++ DIE + +N ++ + Y+A+ ++ + Sbjct: 236 TFTGPAVYTEAKKYHKVEFKDIESGKAEIDKSSTNGYVAMVQHYFATAWLLADGIQRDLF 295 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 + + Y + I PG+S T LFAG + + P E++ Sbjct: 296 VRKVDTN--LYSVGMITSVGEIAPGQSKTLDARLFAGPQIETMLEKLS-----PGLELVK 348 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GW +AKP++ L+ + ++ N+G +I+ + +K+ F+ L K Y S A MK I P Sbjct: 349 DYGWLTILAKPLYWLLEQLHKILNNWGWSIVGLVLLLKIAFYWLNAKAYASMAKMKAINP 408 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 KI E+RE+ K PQ +Q+ M+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+EMR Sbjct: 409 KIMEMRERLK-DKPQQMQQEMMRIYREEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMR 467 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 +AP+ GWI DL++ DP I P++M+ S +Q ++P P D Sbjct: 468 NAPWIGWIHDLSSPDPYFIL-------------------PLLMTASSLLQTALNPAPPDP 508 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ +MP++F FPAGL++YW +N++SI QQ +I K G Sbjct: 509 MQAKMMWFMPLIFSVMFFFFPAGLVMYWLTNNILSIAQQWIINKRMGV 556 >gi|262371177|ref|ZP_06064498.1| inner membrane protein oxaA [Acinetobacter johnsonii SH046] gi|262313907|gb|EEY94953.1| inner membrane protein oxaA [Acinetobacter johnsonii SH046] Length = 587 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 150/600 (25%), Positives = 255/600 (42%), Gaps = 72/600 (12%) Query: 3 RNWNYFVAIALSVII----VYAWQNFYVYPRIEEMNNERK-----------NIQTVKQPN 47 + W F + ++ + AWQ Y + + + N QT + Sbjct: 2 QQWARFAILGAMFVVAYLLILAWQKDYGHAETQPQPQQAAAVSHEVSADLPNAQTASAAS 61 Query: 48 QVDNSY-AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + + A A+A + ++ IN KG + L + SN Sbjct: 62 DMPQANIATQQPATEAKASVNQQLISVQTDLYHLWINPKGGDIVRIELLNHDKSKDSNEA 121 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNS-------NTVWNLISGKILTPT------ 153 V L S+ K Y A+ + + + + L K + Sbjct: 122 FVML--ESDAKRTYVAQSGLIGLNGPDSNRSGRPMYEIEKSAYTLNDAKAVQTEDGKSIK 179 Query: 154 -TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH------ 205 + +V K A+ + +T + + Y + V N S + G++ R Sbjct: 180 VLTVPMVLKTADGVEIIKTFTFKQGEYPVVVNHKVVNRSGQNWQGQMFGQLKRDNSDDPG 239 Query: 206 KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP 265 K T G G ++ + K+++ + + N W+ + Y+ S +IP Sbjct: 240 KSDQGIFTLGTFLGGAWGSPEEHYNKLKFANFNEEKL-NVEAKGGWVAMVQHYFVSAWIP 298 Query: 266 -------SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 + + ++ + F++ IT+ G ++G K + Sbjct: 299 GDLKLTQANGQPYVAKLESRKSTDDMNIIGFTSPTITVPAGTVAEIDATFYSGPKVQSEL 358 Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 +D+GW + IAK +F+ + +F+ LVGN+G AI+L TV VKL+ +PL Sbjct: 359 KEL-----ATGLNQTVDYGWLWPIAKLLFLGLEFFHGLVGNWGWAIILLTVLVKLILWPL 413 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 + K Y S A M+ I P++ ++E+F + + Q M+ LYK +NPLAGC P+LLQ+P Sbjct: 414 SSKSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQ-EMMALYKREQVNPLAGCLPLLLQMP 472 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 +F A+Y V+ S+E+RHAP+ WI+DL+A DP I P++M Sbjct: 473 IFLALYWVLMESVELRHAPWLLWIQDLSAMDPWFIL-------------------PLLMG 513 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MFIQ ++P PAD QA + MP+VF + FPAGL++YW +N I+I+QQ +I K Sbjct: 514 ATMFIQQSLNPQPADPMQAKVFKIMPIVFTVFMLFFPAGLVLYWIVNNSITIIQQTLINK 573 >gi|121596421|ref|YP_988317.1| protein translocase subunit yidC [Acidovorax sp. JS42] gi|120608501|gb|ABM44241.1| protein translocase subunit yidC [Acidovorax sp. JS42] Length = 570 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 139/589 (23%), Positives = 243/589 (41%), Gaps = 56/589 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + +V W + ++ + QT P + A + Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQIHNGNKATFFPTPPAQTASTPAVAASGAGAADVPV 60 Query: 61 -------------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 A RV + L S + +G L Y Sbjct: 61 AAASATPGAAAQPPAGASVPPAAAIPRKRVTVSTDVLRLSFDSEGGSLVHGELLQYPEME 120 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLV 159 P LL + Y A+ + P T ++ G ++ + + Sbjct: 121 DKTKPF--LLLDESASRVYVAQTGLIGNGAGGAFPTHKTPMAVVPGPRELQDGQNELTVR 178 Query: 160 FKNAN--NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTF 214 F++A+ + +T +L Y + V N + ++ R KP ++ + Sbjct: 179 FESADMGGVKLVKTWTLKRGAYDVAVKHEVVNTGTAPVSPQLYLQLARDGNKPAGESSFY 238 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHS 273 G K + ++ DIE + S+ ++ + Y+A+ ++ + Sbjct: 239 STFTGPAVYTEAKKYHKVEFKDIENGKAEIDKSSSDGYVAMVQHYFATAWLLGDGVQRDN 298 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + + Y I PG+S LFAG + + P E++ Sbjct: 299 FVRKVDTN--LYSVGMITPLGEIAPGQSKAVDARLFAGPQIETLLEKL-----APGLELV 351 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 D+GW +AKP++ L+ + ++ N+G +I+ +K+ F+ L K Y S A MK I Sbjct: 352 KDYGWLTILAKPLYWLLDQLHKVIANWGWSIVALVFLLKIAFYWLNAKAYASMAKMKAIN 411 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P+I E+RE+ K PQ +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+EM Sbjct: 412 PRIMEMRERLK-DKPQQMQQEMMRIYREEKVNPMGGCLPIMIQIPVFIALYWVLLSSVEM 470 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R+AP+ GWIKDL++ DP I P++M+LS +Q ++P P D Sbjct: 471 RNAPWIGWIKDLSSPDPFFIL-------------------PLLMTLSSLLQTALNPAPPD 511 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP++F FPAGL++YW +N++SI QQ +I G Sbjct: 512 PMQAKMMWLMPLMFSVMFFFFPAGLVLYWLTNNILSIAQQWIINTRMGV 560 >gi|322506198|gb|ADX01652.1| YidC [Acinetobacter baumannii 1656-2] Length = 574 Score = 445 bits (1145), Expect = e-122, Method: Composition-based stats. Identities = 150/582 (25%), Positives = 256/582 (43%), Gaps = 67/582 (11%) Query: 16 IIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 +++ AWQ Y E++ + N +T + V + A A A Sbjct: 7 LLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVASDVPQANIAQSQTTDATA 66 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + ++ IN KG + L + SN P V L ++ K Y A+ Sbjct: 67 PVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPFVML--ENDAKRTYVAQS 124 Query: 125 DYVS-------TANNIELPNSNTVWNLISGKILTPT-------TPIKLVFKNANNILFER 170 + T + L K + + +VFK + + Sbjct: 125 GLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKVLTVPMVFKTPEGVEIIK 184 Query: 171 TISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT------ATNTFGVQEGFIAV 223 T + + Y + V N S + G++ R + T G G Sbjct: 185 TFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFLGGAWG 244 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSFHSQFK 276 D + K+++ + + N W+ + Y+ S +IP + + ++ + Sbjct: 245 TPDAHYNKLKFANFSEEKL-NTEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQPYVAKLE 303 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 F++ I + G S+ L++G K + KDLA+ +D+ Sbjct: 304 SRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSEL----KDLAV-GLNQTVDY 358 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ I P++ Sbjct: 359 GWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRVIAPEM 418 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++E+F + + Q M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+RHA Sbjct: 419 QRMKEEFGEDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELRHA 477 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ GWI+DL+A DP I P+IM +MF Q ++P PAD Q Sbjct: 478 PWLGWIQDLSAMDPWFIL-------------------PLIMGATMFAQQMLNPQPADPMQ 518 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 A + MP++F + FPAGL++YW +N I+I+QQ I K Sbjct: 519 AKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINK 560 >gi|330505869|ref|YP_004382738.1| putative inner membrane protein translocase component YidC [Pseudomonas mendocina NK-01] gi|328920155|gb|AEB60986.1| putative inner membrane protein translocase component YidC [Pseudomonas mendocina NK-01] Length = 592 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 144/619 (23%), Positives = 248/619 (40%), Gaps = 91/619 (14%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + VA+A+ S ++V W Y + + + A+ Sbjct: 1 MDIQRSILIVALAVVSYLMVLQWNEDYG--QAALPAEVSTSTAATPALPDTPAATASTGS 58 Query: 59 DDRAQALSMS-------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 DD A++ + +K L +I+ +G L L Y Sbjct: 59 DDIPTAVAEPTAAAVAPTAATSDELIRVKTDVLELAIDPRGGDIVQLRLPQYPRRQDRPD 118 Query: 106 PIVTLLSPSNTKNAYFAELDYVS------TANNIELPNSNTVWNLISGKILTPTTPIKLV 159 L + + Y A+ + ++ + + + G+ + + L Sbjct: 119 VPFQLFD-NGNERTYLAQSGLIGQNAPDKSSGRALWSSEKQSYEMAEGQ---DSLVVDLT 174 Query: 160 FKNANNILFERTISLDEH----------------------YLFKIVDTVTNNSIDQIRFS 197 + + N + + + S Y + + N S + Sbjct: 175 Y-SENGVSYIKRYSFKRGLNPECSAREQELKKPGCIDPSAYQVDVRYLIDNQSDQAWSGN 233 Query: 198 PRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE------ 247 ++ R G D+ + DI+K Sbjct: 234 LFAQLKRDNSGDPSSTTATGTATYLGAAVWTADEPYKKISIKDIDKQDEKRRQGDANAWF 293 Query: 248 ----SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 W+ Y+ + ++P+K+ + Q + D Y F+ + + G Sbjct: 294 KENVQGGWVAWLQHYFVTAWVPNKDNTNLIQTR--KDSQGNYIVGFTGPSVQVAAGGKGE 351 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T L+AG K + P E+ +D+G+ +F+A+P+F L+ + ++GN+G + Sbjct: 352 TGAILYAGPKLQEHLSTLS-----PGLELTVDYGFLWFLAQPIFWLLQVIHGVLGNWGWS 406 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ +KL+FFPL+ Y S A M+ + PK+ L+E+ Q + +AM++LYK Sbjct: 407 IIVLTIIIKLIFFPLSAASYRSMARMRAVSPKLQALKEQHGDD-RQKMSQAMMELYKKEK 465 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 466 INPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWLLWITDLSIKDPFFIL--------- 516 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 PIIM +MFIQ +++P P D QA +L MP++F F FPAGL++YW Sbjct: 517 ----------PIIMGATMFIQQQLNPTPPDPMQARVLKLMPIIFTFFFLWFPAGLVLYWV 566 Query: 544 WSNVISIVQQAVIMKMHGA 562 +N +SI QQ I + A Sbjct: 567 VNNCLSIAQQWYITRRIEA 585 >gi|239503913|ref|ZP_04663223.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii AB900] Length = 586 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 152/599 (25%), Positives = 260/599 (43%), Gaps = 71/599 (11%) Query: 3 RNWNYFVAIALSV----IIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPN 47 + W F + +++ AWQ Y E++ + N +T + Sbjct: 2 QQWARFAILGAMFVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVAS 61 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 V + A A A + ++ IN KG + L + SN P Sbjct: 62 DVPQANIAQSQTTDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPF 121 Query: 108 VTLLSPSNTKNAYFAELDYVS-------TANNIELPNSNTVWNLISGKILTPT------- 153 V L ++ K Y A+ + T + L K + Sbjct: 122 VML--ENDAKRTYVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKV 179 Query: 154 TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT--- 209 + +VFK + +T + + Y + V N S + G++ R + Sbjct: 180 LTVPMVFKTPEGVEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGK 239 Query: 210 ---ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP- 265 T G G D + K+++ + + N W+ + Y+ S +IP Sbjct: 240 SSQGIFTLGTFLGGAWGTPDAHYNKLKFANFSEEKL-NTEAKGGWVAMVQHYFVSAWIPG 298 Query: 266 ------SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 + + ++ + F++ I + G S+ L++G K + Sbjct: 299 NLKLTQANGQPYVAKLESRQSADNMNIIGFTSPVINVPVGTSMEVDAKLYSGPKVQSEL- 357 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 KDLA+ +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ Sbjct: 358 ---KDLAV-GLNQTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLS 413 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K Y S A M+ I P++ ++E+F + + Q M+ LYK +NPL+GC P+LLQ+P+ Sbjct: 414 SKSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPI 472 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F A+Y V+ S+E+RHAP+ GWI+DL+A DP I P+IM Sbjct: 473 FLALYWVLMESVELRHAPWLGWIQDLSAMDPWFIL-------------------PLIMGA 513 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MF Q ++P PAD QA + MP++F + FPAGL++YW +N I+I+QQ I K Sbjct: 514 TMFAQQMLNPQPADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINK 572 >gi|157373143|ref|YP_001471743.1| 60 kDa inner membrane insertion protein [Shewanella sediminis HAW-EB3] gi|189036364|sp|A8FP42|OXAA_SHESH RecName: Full=Inner membrane protein oxaA gi|157315517|gb|ABV34615.1| 60 kDa inner membrane insertion protein [Shewanella sediminis HAW-EB3] Length = 544 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 142/569 (24%), Positives = 247/569 (43%), Gaps = 46/569 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + + +S Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQTDQAPQPVAMESSSTIPSSSTSDSHSSDVPDADSA 59 Query: 61 RAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A+ S + + LI IN G L + L++ + P V L + Sbjct: 60 LPAAVVASKELITVNTDQLIIKINPIGGDIVYSALVEHKLELDKDEPFVLLEQTKDIN-- 117 Query: 120 YFAELDYVS-------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ + + +++ + L SG+ T + L F N + + Sbjct: 118 YIAQSGLIGRNGIDSSSKGRAHFDSASREYTLASGQ---DTLEVPLTFVADNGATYTKMF 174 Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQEGFIAVLGDKSLV 230 + + + N++ Q++ G+I Q+ ++ G + Sbjct: 175 VFHRGQFKVDVDYVIDNSTDQQLQVQMYGQIKHSIKQSESSMMMPTYRGAAFSTANTRYE 234 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + D+ ++ W + Y+ S ++P + G A F Sbjct: 235 KYSFDDMADKNLDE-KTLGGWAAMLQHYFVSAWVPPANDQNIIFSSISAGGQAN--IGFR 291 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + PG + T + + G K + +++D+G+ +++A P++ L+ Sbjct: 292 GAVYDVAPGATQTINSEFYVGPKNQEALSAIS-----ESLNLVVDYGFLWWLAVPIYKLL 346 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 +F +LV N+G+AI+L T+ V+ + +PL K QY S A M+N+QPK+ E++E+F Q Sbjct: 347 MFFQSLVTNWGLAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLAEMKERFGDD-RQK 405 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI DL+ DP Sbjct: 406 MGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQDP 465 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFV 528 + PI+M +SMF+ KM P P D Q ++ WMPVVF Sbjct: 466 YYV-------------------MPILMGISMFVMQKMQPMAPTMDPMQQKMMQWMPVVFT 506 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 507 VFFLWFPAGLVLYWLVGNLVAITQQKIIY 535 >gi|254515874|ref|ZP_05127934.1| 60 kDa inner membrane insertion protein [gamma proteobacterium NOR5-3] gi|219675596|gb|EED31962.1| 60 kDa inner membrane insertion protein [gamma proteobacterium NOR5-3] Length = 586 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 158/612 (25%), Positives = 275/612 (44%), Gaps = 87/612 (14%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFY----------------VYPRIEEMNNERKNIQT 42 M+ + + LS +++ W NF + + N + Q Sbjct: 1 MDIQRTLLIGAIMLLSFMLLTEWVNFKTVKDEVVVTETRLTASPDFQADSSNADSATTQA 60 Query: 43 V-------------------KQPNQVDNSYAAVLIDDR----AQALSMSPRVELKNPSLI 79 V +D+ A D A S V++ SL Sbjct: 61 VGNSDLPADLPDDTLSNTSISTAADIDDIPAVSASVDAGTSAAAVTSTGNIVQVYTDSLQ 120 Query: 80 GSINLKGAQFDDLNLRGYHLDVS-SNSPIVTLLSPSNTKNAYFAELDYVS-----TANNI 133 +I+L G ++ L + ++ +P V L +N++ Y A+ + + + Sbjct: 121 VAIDLNGGDIVEVALAKFLAEIDDPETPFVLL--ENNSRRVYVAQSGLIGRDGIDSKSRA 178 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192 + T ++L S L + L++ N + + + + Y+ + + N S + Sbjct: 179 TYRTAQTRYDLGSADSL----QVDLLWSNDEGVKVTKRFNFQRDSYVVDVEFIIDNQSGE 234 Query: 193 QIRFSPRGRIMRHKPQTATNT-----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE 247 Q + + G+I R TN G D + + ++ K H Sbjct: 235 QWQGNLFGQIKRDSSAAVTNGGGGMGMQPFLGAATTTADDRFKKFSFDNMRKEPFREQH- 293 Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 S W+ + Y+ S +IP+ E + + + G A F++ I + PG + + Sbjct: 294 SGGWIAMIQHYFLSAWIPAPEQTHTYSTRVTNSGFNI--AGFTSPAINVDPGSTREVSAR 351 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 +AG K+ ++ P E+ +D+GW +++A+P+F L++ Y+LVGN+G AI+L Sbjct: 352 FYAGPKDQYSLQEIS-----PYLELSVDYGWLWWVAQPLFWLLTKIYSLVGNWGAAIILL 406 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 TV +K +FF L+ Y S ANM+ +QPK+ ++RE++ Q +AM++LY+ INP+ Sbjct: 407 TVLIKAVFFKLSATSYKSMANMRRVQPKMADIREQYADDK-QKQSQAMMELYRKEKINPM 465 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC PIL+Q+PVF A+Y ++ S+E+R APF WI DL+ DP + Sbjct: 466 GGCLPILVQMPVFIALYWMLMESVELRQAPFMLWINDLSVMDPYFVL------------- 512 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 P++M SMF K++PPP D QA I+ W+PV+F F FPAGL++YW +N+ Sbjct: 513 ------PLMMGASMFFMQKLNPPPPDPMQAKIMQWLPVIFTFFFLWFPAGLVLYWVVNNL 566 Query: 548 ISIVQQAVIMKM 559 +S+ QQ VI + Sbjct: 567 LSMAQQYVITRQ 578 >gi|124269009|ref|YP_001023013.1| protein translocase subunit yidC [Methylibium petroleiphilum PM1] gi|124261784|gb|ABM96778.1| protein translocase subunit yidC [Methylibium petroleiphilum PM1] Length = 553 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 149/584 (25%), Positives = 248/584 (42%), Gaps = 54/584 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + ++ +V W + + M V ++VL Sbjct: 1 MTDMRRTLLWVVFTMSLVLLWDAWNKHTGQPSMFAPAPRPVAAASAPGVTPPASSVLPSA 60 Query: 61 RAQALSMSP--------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 A A + V + L +++ +G L +D + + Sbjct: 61 TAVAPAAGSGAPPALVAPPATAPTVTVSTDVLKLTLDSRGGDVVHAELLT-QVDQNDRTR 119 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKN 162 V L S + Y A+ V +LPN T + L+ G+ + Sbjct: 120 NVVLFDRS-KERVYLAQTGLVGAP---DLPNHLTAYTLVPGETSLAAGKDALEVVFESPE 175 Query: 163 ANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEG 219 + +T++L +Y ++ V N + +++R P ++ + G Sbjct: 176 QGGVKLRKTLTLQRGNYAVQVRHDVVNTGTAALSPQLYVQLVRDGNAPPGESSFYSTFTG 235 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + + + IEK + + + N W+ + Y+ S ++ + + + + Sbjct: 236 PVVYTDASKFHKVDFKSIEKGNTEHDKTADNGWVAMVQHYFFSAWLHNDKAPREFYTRKI 295 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 Y I PG S + LF G +E + P E++ D+GW Sbjct: 296 DVN--LYAVGQLFPLGEIAPGASKQFDSVLFVGPQEEKKLETL-----APGLELVKDYGW 348 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F IAKP+F L+ + L+GN+G AI+ V +K F+ L K Y S A MK I PKI E Sbjct: 349 FTIIAKPLFWLLDQLHKLIGNWGWAIVALVVLLKAAFYWLNAKAYASMAKMKAINPKIME 408 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +RE+ K PQ +Q+ M+++YK +NPL GC PIL+Q+PVF A+Y V+ S+EMR+AP+ Sbjct: 409 MRERLK-DKPQQMQQEMMRIYKEEKVNPLGGCLPILVQMPVFIALYWVLLSSVEMRNAPW 467 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 GWI DL+ DP I PI+M+ + +Q ++P P D QA Sbjct: 468 LGWITDLSVRDPLFIL-------------------PIVMTGTTLLQTWLNPTPPDPMQAK 508 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP+VF FPAGL++YW +N++SI QQ VI + G Sbjct: 509 MMWIMPLVFSVMFFFFPAGLVLYWITNNLLSIAQQWVINRRLGV 552 >gi|221069751|ref|ZP_03545856.1| YidC translocase/secretase [Comamonas testosteroni KF-1] gi|220714774|gb|EED70142.1| YidC translocase/secretase [Comamonas testosteroni KF-1] Length = 570 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 138/587 (23%), Positives = 259/587 (44%), Gaps = 58/587 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV--------YPRIEEMNNERKNIQTVKQPNQVDNS 52 M + + +V W + + +P + ++ + + Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQIHNGKKPTFFPSPQTVSAPAAADAKPADVSVPQPA 60 Query: 53 YAAVLIDDR---------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 AA D A A++ V + + + + + +G L Y Sbjct: 61 AAASAGDVPGAANAAGQPAAAVTPRQDVTVGSDVMRLTFDSEGGTLKHSELLKYSDTAD- 119 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIKLVFK 161 + ++ + N K Y + + P T ++ G+ + +++ F+ Sbjct: 120 DKKLMQVF-EENAKRVYLGQTGLIGG----NFPTHKTPMTVMPGERELKDGQDSVQVRFE 174 Query: 162 NAN--NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGV 216 +A+ + +T +L Y + V N + +++R KP+ ++ + Sbjct: 175 SADQGGVKLVKTFTLKRGSYAVDVQHDVVNTGSAAVNPQLYMQLVRDGNKPEHESSFYST 234 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G K + ++ DIE + N ++ + Y+AS ++ + + Sbjct: 235 FTGPAVYTDAKKYHKVEFKDIESGKAEVDKASPNGFVAMVQHYFASAWLLADGIQRDNFV 294 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + + D Y T+ PG++ T ++ LF+G + P + P E++ D Sbjct: 295 RKVGDN--LYAVGMITPVGTVEPGQTKTVSSRLFSGPQIEPMLEKLS-----PGLELVKD 347 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +AKP++ L+S + +GN+G +I+ V +K+ F+ L K Y S A MK I P+ Sbjct: 348 YGWLTILAKPLYWLLSELHKFIGNWGWSIVALVVLLKIAFYWLNAKAYSSMAKMKAINPR 407 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I E+RE+ K PQ +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+E+R+ Sbjct: 408 IQEMRERLK-DKPQQMQQEMMRIYREEKVNPMGGCLPIIIQIPVFMALYWVLQSSVEIRN 466 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 AP+ GWI DL+ DP I P++M+LS +Q ++P P D Sbjct: 467 APWIGWIHDLSVPDPFFIL-------------------PLLMTLSSLLQTALNPAPPDPM 507 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP++F FP+GL++YW +N++SI QQ +I K G Sbjct: 508 QAKMMWIMPLMFSVMFFFFPSGLVLYWLTNNILSIAQQWIINKRMGV 554 >gi|121606995|ref|YP_984324.1| 60 kDa inner membrane insertion protein [Polaromonas naphthalenivorans CJ2] gi|120595964|gb|ABM39403.1| protein translocase subunit yidC [Polaromonas naphthalenivorans CJ2] Length = 569 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 135/588 (22%), Positives = 248/588 (42%), Gaps = 55/588 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY--------PRIEEMNNERKNIQTVKQPNQVDNS 52 M + + +V W + V+ P + + + S Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDQWQVFNGHKATFFPSSTQTAKTTGSTAVPSTGSAAVPS 60 Query: 53 YAAVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 +A + A+ ++ + L + + +G Y Sbjct: 61 PSASAMPGSPAAVPAGAPLATPSVAKEQLTVNTDVLSLTFDSEGGTLVHTAFNKYKDMTH 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKL 158 + V L +T Y A+ ++ +N P T+ ++ G+ L +K Sbjct: 121 KDQGFVLL--DQSTNRVYVAQTGLIAGSNGGTFPTHKTLMTVVPGERLLKDGQNELQVKF 178 Query: 159 VFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFG 215 + + +T ++ Y + + N + +++R KP ++ + Sbjct: 179 ESADMGGVKLLKTYTIKRGAYDLAVRHEIINTGTTPVAPQLYLQLVRDGNKPPGESSFYS 238 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 G K + ++ DIE + + +N ++ + Y+AS +I Sbjct: 239 TFTGPAIYTEAKKYQKVEFKDIENNKVDVEKQATNGYVAMVQHYFASAWILPDGLKRDLF 298 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 + + Y I PG + T + F G +E + P E++ Sbjct: 299 LRKVDTN--LYAVGMITPLDPIAPGATKTVDSKFFVGPQEEKVLEAL-----APGLELVK 351 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GW +AKP++ L+ ++ + N+G +I+ + +K+ F+ L K Y S A MK I P Sbjct: 352 DYGWLTILAKPLYWLLDKLHSFIQNWGWSIVALVLLLKIAFYWLNAKAYASMAKMKAINP 411 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 KI E+RE+ K PQ +Q+AM+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+EMR Sbjct: 412 KITEMRERLK-DKPQEMQQAMMKIYREEKVNPMGGCFPIMIQIPVFIALYWVLLSSVEMR 470 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 AP+ WI+DL++ DP I P++M+L+ +Q ++P P D Sbjct: 471 GAPWILWIRDLSSPDPYFIL-------------------PVVMALTTMLQTALNPAPPDP 511 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ +MP++F FPAGL++YW +N++SI QQ VI G Sbjct: 512 MQAKLMWFMPLIFSVMFFFFPAGLVLYWITNNILSITQQWVINTRMGV 559 >gi|85712624|ref|ZP_01043671.1| Preprotein translocase subunit YidC [Idiomarina baltica OS145] gi|85693615|gb|EAQ31566.1| Preprotein translocase subunit YidC [Idiomarina baltica OS145] Length = 554 Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 138/570 (24%), Positives = 244/570 (42%), Gaps = 44/570 (7%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNN-------ERKNIQTVKQPNQVDNSYAAVLID 59 I +S + W E +N TV Q A + Sbjct: 9 LVAFIVVSFFLFQQWTIDTAPGTKAPQQTQQTTQQTEDQNSSTVPQSGSNTADTAVPESN 68 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 S + + L I+L G L + + S L N+ + Sbjct: 69 SPNAITSNGRLITVVTDELELKIDLNGGDIVSAKLLEFAATLDSEERFQLL--KRNSNHI 126 Query: 120 YFAELDYVSTANNIELPNSNTVWNLIS--GKILTPTTPIKLVFKNANNILFERTISLDE- 176 Y A+ + I+ N + ++ T + L + + + +T + Sbjct: 127 YIAQSGLIGPQG-IDSNNGRAQYQAAQERYRLTGDTLEVPLTTQTESGLNVTKTFVIKRG 185 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG--DKSLVEQKY 234 HY + + N S + + G++ + + + + F A + + + Sbjct: 186 HYDIGVNYAIENQSSEAAQLQFYGQLQQTMTAGESGSMIMPTYFGAAYSQDEDKFEKYPF 245 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D+ + +S W+ + Y+ + ++P++ + A + Sbjct: 246 DDMREKKLS-VTTQTGWVSMLQHYFVAAWVPTQTQQNKFYSQVTPSNQAVIGVLY--PST 302 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 T+ PG S T +F G K+ + P ++ +D+G+ +++A+P+F L+ + Sbjct: 303 TVQPGASKTIDATIFVGPKDQDAMAKV-----APYLDLTVDYGFLWWLAQPIFKLLQFLQ 357 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + V N+G+AI+L TV +K L FPL K QYVS A M+ +QPK+ LRE++ Q + +A Sbjct: 358 SFVINWGLAIILITVIIKALLFPLTKAQYVSMAKMRLLQPKMKSLRERYGDD-RQKMGQA 416 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC P+LLQ+P+F ++Y V+ S+E+RH+ F WI+DL+ DP I Sbjct: 417 MMKLYKEEKVNPLGGCLPMLLQLPIFLSLYWVLLESVELRHSSFVFWIQDLSTKDPYYIL 476 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSS 533 PI+M +SMF+ ++ P PA D Q + +MPV+F Sbjct: 477 -------------------PILMGISMFVMQRLQPTPATDPMQQKLFQYMPVIFTVFFLW 517 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+I+I Q +I K + Sbjct: 518 FPSGLVLYWLVSNLITITQMLIIYKGLEKK 547 >gi|170697750|ref|ZP_02888837.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria IOP40-10] gi|170137365|gb|EDT05606.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria IOP40-10] Length = 553 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 153/580 (26%), Positives = 252/580 (43%), Gaps = 53/580 (9%) Query: 1 MERNWNYFVAIALSVIIVY--AWQNFYVYPRIEEMNNERKNIQ---------TVKQPNQV 49 M+ I ++ WQ + P + + + +V Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAVAGGASGTGATTTAGEV 60 Query: 50 DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + A A A + + V+ G I+ +G L L+ D +T Sbjct: 61 PAAAAGTAPSTTAPA-AQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK-QGDGKQPDLYIT 118 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI---SGKILTPTTPIKLVFKNA--N 164 L + + Y A + + PN N V+ + + +KL F++ Sbjct: 119 LFDHT-AGHTYLARTGLLGG----DFPNHNDVYTQVNAGPTSLTGDQNALKLSFESPVKG 173 Query: 165 NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIA 222 + +T + Y+ + + N + + ++R T F G Sbjct: 174 GVKVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAV 233 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 K + +SD++K+ + + N W+ + Y+AS +IP + + + Sbjct: 234 YTDAKHFQKIDFSDLDKNKANFEKTADNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDP- 292 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 A Y+ I PG+S LFAG +E + P E++ D+GW Sbjct: 293 -ALYRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGI-----APGLELVKDYGWVTI 346 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+F L+ + VGN+G AI+L TV +K +FFPL+ Y S A MK I P++ LRE Sbjct: 347 IAKPLFWLLEKIHGFVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRE 406 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 +FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ W Sbjct: 407 RFKSDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILW 465 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I DL+ DP I P++M++SMF+Q ++P P D QA ++ Sbjct: 466 IHDLSQRDPFFIL-------------------PVLMAVSMFVQTSLNPTPPDPVQAKMMK 506 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 507 FMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 546 >gi|261856984|ref|YP_003264267.1| membrane protein insertase, YidC/Oxa1 family domain containing [Halothiobacillus neapolitanus c2] gi|261837453|gb|ACX97220.1| membrane protein insertase, YidC/Oxa1 family domain containing [Halothiobacillus neapolitanus c2] Length = 570 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 160/596 (26%), Positives = 264/596 (44%), Gaps = 59/596 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNF-----------------YVYPRIEEMNNERKNIQTVKQ 45 N + +AL +++ WQ + P K+I Sbjct: 2 DNRRLILVVALGFVLISLWQAWTHDQSQSAQQTAATLQNAASPDSPAQPTAAKDIPATSA 61 Query: 46 PNQVDNSYAAVLIDDRAQALS-MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 P+ +AV A+ S + + +K L I+L+G D+ +L Y + Sbjct: 62 PSASGQDQSAVPGGSAAKPTSKAAQTITVKTDVLALKISLQGGVIDEADLLKYPQEQDKA 121 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK-ILTP---TTPIKLVF 160 P V LL+ SN Y A+ + P+ + + LTP I L + Sbjct: 122 DP-VRLLTDSNG-FVYVAQSGLIGEKG-APAPDHYAQYTAPQMEYTLTPGENELRIPLTW 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + + + I Y ++ + N S S ++ R T G Sbjct: 179 EKDGIKITKLIIIKRGDYTVQVEYKIDNTSQSPWAASQYRQLTRLGTTPGTQLVHTYTGT 238 Query: 221 IAVL---GDKS---LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 + G K + + ++ K+ +S S+ W+ I Y+ S ++PS + Sbjct: 239 VYAGDVPGTKDRLAYEKIPFEEMLKTKLSK-DLSSGWVAIIQHYFMSAWVPSDRQQVNHF 297 Query: 275 FKYLSDGHAR--YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + +SD + + Y S+ TI G S ++ L+ G K + + L + Sbjct: 298 YTLVSDKNNQTLYTIGMSSPVTTIPAGGSGELSSTLYVGPKIQANLAPLAQGLN-----L 352 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 ID+G F IA P+F L+ +F+ VGN+G +I+L T+ +KL F + Y S A M+ + Sbjct: 353 TIDFGIFTVIADPIFWLLKHFHEWVGNWGWSIVLVTLVIKLFFLWPSAISYRSMAKMRAV 412 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PK+ L+EKF + Q L + M++LY+ INPL GC PI++QIPVF ++Y V++ S+E Sbjct: 413 TPKMKALKEKFGED-RQKLSQEMMKLYQREKINPLGGCLPIVIQIPVFISLYWVLAESVE 471 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +R AP+ WI DL+ DP + P++M +SMFIQ K++P P Sbjct: 472 LRQAPWILWIHDLSQKDPYFVL-------------------PLLMGISMFIQQKLNPAPV 512 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 D Q I W+PV+F S FPAGL++YW +N++SI QQ +I + ++ LI Sbjct: 513 DPMQQKIFAWLPVIFTIFFSFFPAGLVLYWFVNNLLSIAQQYMITRKIEKQMALIK 568 >gi|307547061|ref|YP_003899540.1| preprotein translocase subunit YidC [Halomonas elongata DSM 2581] gi|307219085|emb|CBV44355.1| K03217 preprotein translocase YidC subunit [Halomonas elongata DSM 2581] Length = 566 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 139/575 (24%), Positives = 232/575 (40%), Gaps = 57/575 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD-----------------NSYAAVLI 58 +IV W Y + + D N+ + Sbjct: 18 LIVVQWNQDYGQATQAPEAPAITSDSPASSQDAADTDSSDLSVPSSGTANAGNADMGSAM 77 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + V + L I+ +G L + ++ P V L N Sbjct: 78 PGDKAASNSRDLVAVATDVLDIRIDPQGGDIVYAALPQHKYAEDTDQPFVLL--SDNATR 135 Query: 119 AYFAELDYV--STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD- 175 +Y A I T + L G + L N + + + D Sbjct: 136 SYVARSGLQLEGHQGRIAFTPEKTEYRLNEGD---DQLQVDLSAT-VNGVDVIKRFTFDR 191 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT----FGVQEGFIAVLGDKSLVE 231 + Y + + N S + G+++R ++ G + ++ Sbjct: 192 DSYAVNVAYLLDNPSETPVTARFVGQLVRDNSSDPSSGPKMGMRSFLGAAFSTPEDRYLK 251 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + DI N W+ + Y+ S + P ++ + F +D R A F+ Sbjct: 252 VDFDDIRDGKFENRDVEGGWVAMIQHYFTSAWAPPQDQK--NLFYTATDSQNRNVAAFAG 309 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 T+ T L+ G K + P E+ +D+GW +FIA P+F L+ Sbjct: 310 PTRTLGAESKATLAATLYVGPKIQDRLEAV-----APNLELTVDFGWLWFIANPLFWLLD 364 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + +++GN+G +I++ T+ VK PL+ K Y S A M+ + P++ L+E++ Q + Sbjct: 365 HIQDVIGNWGWSIVILTLLVKTALLPLSAKAYKSMARMRKLGPEMQRLKEQYGDD-RQKM 423 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + M++ Y+ INPL GC PI++Q+PVF A+Y ++ S+E+RHAPF WI DL+ DP Sbjct: 424 SQEMMKFYQKEKINPLGGCLPIVVQMPVFIALYWMLLESVELRHAPFMFWITDLSVKDPY 483 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 + PI+M SMF+Q ++P P D QA I+ +PVVF F Sbjct: 484 FVL-------------------PILMGASMFVQQLLNPTPPDPTQAKIMKLLPVVFTFFF 524 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 FPAGL+IYW +N+ SI QQ I + A+ + Sbjct: 525 LWFPAGLVIYWVVNNITSIAQQYFITRKVEADPNV 559 >gi|260774544|ref|ZP_05883457.1| OxaI/YidC membrane insertion protein [Vibrio metschnikovii CIP 69.14] gi|260610450|gb|EEX35656.1| OxaI/YidC membrane insertion protein [Vibrio metschnikovii CIP 69.14] Length = 540 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 144/571 (25%), Positives = 251/571 (43%), Gaps = 44/571 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + E+ T + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQAAKNPAPQVIEQAQTSTTAPAPSFADEFDPAPEQH 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 RA A +++ + L SI+ G L Y +++S++P L ++ + + Sbjct: 60 RAAAQTVTVTTD----VLTLSIDTVGGDIIHALLNQYADELNSSTPFTLL--RNDPNHLF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT----PTTPIKLVFKNANNILFERTISLDE 176 A+ + N V+++ I + ++ AN I + +T + Sbjct: 114 IAQSGLIGPQGIDLSSNHRPVYHVDGDHFALADGEQELRIPMTYQ-ANGIEYVKTFIVRR 172 Query: 177 -HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKY 234 Y + V N S + + + + + G D + + Sbjct: 173 GDYAVDVTFDVINRSGNNATLGMYAHLRQTLLDSGGSLAMPTYRGGAYSTEDTRYKKFSF 232 Query: 235 SDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D++ ++S W + Y+AS +IP E + + + + Sbjct: 233 KDMQDRNLSLPLPNGQGWAAMIQHYFASAWIPRNEPGTNLYSRVIGNVGD---IGVRMPN 289 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 TI G + T L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 290 KTIADGDATQFTATLWVGPKLQNDMAA-----TAPNLDLVVDYGWLWFIAKPLHTLLSFI 344 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 345 QSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMSQ 403 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP I Sbjct: 404 EMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYI 463 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 L-------------------PLLMGASMFLIQKMSPNTITDPMQQKIMTFMPVMFTFFFL 504 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + Sbjct: 505 FFPSGLVLYWLVSNIVTLIQQTLIYRSLEKR 535 >gi|241665033|ref|YP_002983393.1| inner membrane protein translocase component YidC [Ralstonia pickettii 12D] gi|240867060|gb|ACS64721.1| 60 kDa inner membrane insertion protein [Ralstonia pickettii 12D] Length = 554 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 148/577 (25%), Positives = 246/577 (42%), Gaps = 55/577 (9%) Query: 5 WNYFVAIALSVIIVYA---WQ--------NFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53 + + S+ +V WQ F + P + Sbjct: 4 KRTILWVIFSLAVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGSTPAGDVPKSASATA 63 Query: 54 AAVLI----DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 AA A S ++ + L +I+ GA L L + + Sbjct: 64 AAGSQAAPATGAASQAPASEKIVISTDLLRATIDTDGAIVTKLELLDQK---DHDGNPMV 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG-KILTPTTPIKLVFK-NANNIL 167 L S + Y A + + PN TV+ +G + L + + + Sbjct: 121 LFDRS-VERTYLARSGLIGG----DFPNHTTVFTASAGPRDLGTGNDVSITLTADKGGAK 175 Query: 168 FERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLG 225 +T Y+ VTN+ I + + R + + G Sbjct: 176 LAKTYVFKRGSYVIDTRFDVTNDGTAPINPTLYMELARDGGAVEQSRFYSTFTGPAVYTD 235 Query: 226 DKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 + ++DI+K ++ W+ + Y+AS +IP+ + Sbjct: 236 GDKFHKITFADIDKGKAQVPAPTDSGWVAMVQHYFASAWIPADNVKREYYVNRVDTN--F 293 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y+ T+ PG S++ T LFAG ++ + P +++ D+GW +AK Sbjct: 294 YRIGIQEPLGTVAPGASVSATARLFAGPQQARMLESIT-----PGLDLVKDYGWLTIVAK 348 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + L+GN+G +I+ TV +KL+FFPL+ Y S A MK++QP++ +RE+ K Sbjct: 349 PLFWLLEKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHK 408 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 P Q + + M+ LY+T +NPL GC PI++QIPVF A+Y + S+EMR AP+ GW+ D Sbjct: 409 GDP-QKMNQEMMTLYRTEKVNPLGGCLPIVIQIPVFMALYWALLSSVEMRGAPWIGWVHD 467 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I P++M++SMF+Q K++P P D QA ++ +MP Sbjct: 468 LSTPDPFYIL-------------------PVLMAVSMFVQTKLNPTPPDPVQAKVMMFMP 508 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + F FPAGL++YW +N +SI QQ I +M G Sbjct: 509 IAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 545 >gi|260553776|ref|ZP_05826046.1| preprotein translocase subunit YidC [Acinetobacter sp. RUH2624] gi|260405080|gb|EEW98580.1| preprotein translocase subunit YidC [Acinetobacter sp. RUH2624] Length = 586 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 153/599 (25%), Positives = 260/599 (43%), Gaps = 71/599 (11%) Query: 3 RNWNYFVAIALSV----IIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPN 47 + W F + +++ AWQ Y E++ + N +T + Sbjct: 2 QQWARFAILGAMFVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEISADLPNAKTATVAS 61 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 V + A A A + ++ IN KG + L + SN P Sbjct: 62 DVPQANIAQSQTTDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPF 121 Query: 108 VTLLSPSNTKNAYFAELDYVS-------TANNIELPNSNTVWNLISGKILTPT------- 153 V L ++ K Y A+ + T + L K + Sbjct: 122 VML--ENDAKRTYVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQKGQSEKV 179 Query: 154 TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT--- 209 + +VFK + +T + + Y + V N S + G++ R + Sbjct: 180 LSVPMVFKTPEGVEIIKTFTFTQGQYPIVVSHQVINRSQQNWQGQMFGQLKRDNSEDPGK 239 Query: 210 ---ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP- 265 T G G D + K+++ + + N W+ I Y+ S +IP Sbjct: 240 SSQGIFTLGTFLGGAWGTPDSHYNKLKFANFSEEKL-NADAKGGWVAIVQHYFVSAWIPG 298 Query: 266 ------SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 + + ++ + F++ I + G S+ L++G K + Sbjct: 299 NLKLTQANGQPYVAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSEL- 357 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 KDLA+ +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ Sbjct: 358 ---KDLAV-GLNQTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLS 413 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K Y S A M+ I P++ ++E+F + + Q M+ LYK +NPL+GC P+LLQ+P+ Sbjct: 414 SKSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPI 472 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F A+Y V+ S+E+RHAP+ GWI+DL+A DP I P+IM Sbjct: 473 FLALYWVLMESVELRHAPWLGWIQDLSAMDPWFIL-------------------PLIMGA 513 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MF Q ++P PAD QA + MP++F + FPAGL++YW +N I+I+QQ I K Sbjct: 514 TMFAQQMLNPQPADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINK 572 >gi|237801668|ref|ZP_04590129.1| membrane protein insertase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024527|gb|EGI04583.1| membrane protein insertase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 562 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 144/585 (24%), Positives = 243/585 (41%), Gaps = 60/585 (10%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL---- 57 + +AL+++ W Y + N + +A Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTPAPGIPDTAAGTNGSASADVPS 63 Query: 58 --------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 A++ + +K L +I+ G L L Y Sbjct: 64 ATANTTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVPFQ 123 Query: 110 LLSPSNTKNAYFAELDYVST-------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 L + + + A+ T A ++ + L G+ + ++L F + Sbjct: 124 LFD-NGGERTFLAQSGLTGTNGPDARAAGRPVYSSAQKTYQLADGQ---DSMVVELKF-S 178 Query: 163 ANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQ 217 N + + + + Y + V N S + ++ R Sbjct: 179 ENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATY 238 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 G + + DI+K I W+ Y+ + +IP + Q + Sbjct: 239 LGAALWTAAEPYKKVSMKDIDKGQIKE-TVQGGWVAWLQHYFVTAWIPDHNATNSVQTR- 296 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 D Y F++ +T+ PG T+ L+AG K + P E+ +D+G Sbjct: 297 -KDSQGNYIIGFTSPTLTVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDYG 350 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 FLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLA 410 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP Sbjct: 411 VLKEQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAP 469 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DL+ DP I PIIM +MFIQ +++P P D QA Sbjct: 470 WILWITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQA 510 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 KVMKLMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 555 >gi|319796643|ref|YP_004158283.1| membrane protein insertase, yidc/oxa1 family domain containing [Variovorax paradoxus EPS] gi|315599106|gb|ADU40172.1| membrane protein insertase, YidC/Oxa1 family domain containing [Variovorax paradoxus EPS] Length = 563 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 157/587 (26%), Positives = 258/587 (43%), Gaps = 52/587 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY--------PRIEEMNNERKNIQTVKQ-----PN 47 M + + +V W + V+ P + T P Sbjct: 1 MNDIRRTILWVIFGFSLVLLWDQWQVFNGNKPTFLPSSKPAAVATAPAGTTPASSNGVPT 60 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 S A + +A A + +V + +I+ +G + L L+ Y + + Sbjct: 61 ASGTSGNAGAVPTQAAAAAPREQVVVTTDLFKATIDSEGGTVNHLELQKYDE--ADRTKR 118 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISG--KILTPTTPIKLVFKNA- 163 V L + Y A+ ++T + + PN T +G ++ +++ F++A Sbjct: 119 VVLFENGSPATRYVAQTGLLNTVDTGDRFPNHLTPMTPKAGPREMAAGQNTLEVSFESAP 178 Query: 164 -NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEG 219 + + +T Y + V N S +++RH A FG G Sbjct: 179 VGGLKYTKTYVFHRGDYAIGVRHEVANVSDQPRDAQLYMQLLRHGTVAAGTMFGTNTFTG 238 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKE---TSFHSQF 275 A +K + + DI K I +N W+ + Y+AS ++ + +F Sbjct: 239 PAAYTNEKKFHKLDFKDIAKGKIEPPPPANDGWIAMVQHYFASAWLLKGDPASEQLRREF 298 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + G + A I PG + T ++ LFAG +E + P +++ D Sbjct: 299 RVKDLGDNLFTVAMVATLPKIAPGTTQTVSSVLFAGPQEEKKLEAL-----APGLDLVKD 353 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G F I+KP++ L+ + +GN+G AI+ V +K F+ L K Y S A MK I PK Sbjct: 354 YGIFAIISKPLYWLLIQLHGFLGNWGWAIVALVVLLKAAFYWLNAKAYASMAKMKAINPK 413 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I E+RE+ K PQ +Q+ M+++YKT +NP+ GC+PI++QIPVF A+Y V+ S+EMRH Sbjct: 414 IMEMRERLK-DKPQEMQQEMMRIYKTEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMRH 472 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 AP+ GWI DL+A DP I P++M+ + Q ++P P D Sbjct: 473 APWIGWITDLSAPDPWYIL-------------------PVVMTATSLFQTWLNPTPPDPM 513 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP+ F FPAGL++YW +NV+SI QQ I K G Sbjct: 514 QAKLMWIMPLAFSVMFIFFPAGLVLYWITNNVLSIAQQWFINKRLGV 560 >gi|326797441|ref|YP_004315261.1| membrane protein oxaA [Marinomonas mediterranea MMB-1] gi|326548205|gb|ADZ93425.1| Membrane protein oxaA [Marinomonas mediterranea MMB-1] Length = 553 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 156/583 (26%), Positives = 263/583 (45%), Gaps = 60/583 (10%) Query: 5 WNYFV--AIALSV-IIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------PNQVDNSY 53 YF+ A+ +S ++ W Y P+ + +N TV PN V N+ Sbjct: 4 RRYFLWGALFVSGYLLFLQWNQDY-GPQSQTSQPVAQNQTTVNTATNAESDLPNSVSNTT 62 Query: 54 AAVL---IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + A+AL+ +++K +L SI+ G +L Y + ++ P V L Sbjct: 63 LPASDTDVPANAKALASGQLIDVKTDTLDISIDPVGGDLVGASLLQYKKTLDASDPFVIL 122 Query: 111 LSPSNTKNAYFAELDYVS------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +NT Y ++ + + T + L G+ T + L F + Sbjct: 123 --ENNTTRTYVSQSGLIGQDGIDNSKGRPTYHADKTQYVLADGE---NTLDVNLYFTDEK 177 Query: 165 NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFI 221 + + +T Y + TV N S D R +I R + + + G+Q Sbjct: 178 GVEYTKTYRFTRGVYSVEQSITVNNTSADDWRGKQFAQIKRDSTEDPSTATSLGLQPYLG 237 Query: 222 AVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + + +SD+E+ ++ W+ + Y+ S +IP + + Q + Sbjct: 238 GAISTDEVRYEKVSFSDMEEKPAK-ITTNSGWIALLQHYFVSAWIPKQGETVTLQTRS-- 294 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 + F+ E+ + G+ T + + G K + +L + +D+G Sbjct: 295 -NNGINFIGFTGPEVEVPAGQKGTLSATFYVGPKLQDQLAATAANL-----DKTVDYGML 348 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +++A+P+F L++ ++V N+G+AI+L V VK +FF L+ Y S A M+ P++ L Sbjct: 349 WWLAEPLFWLLTAIQSVVINWGVAIILIVVCVKAVFFKLSAASYRSMAKMRKFGPELTRL 408 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE++ Q + +AM+ LYK INPL GC PIL+Q+PVF ++Y V+ S+E+RHAPF Sbjct: 409 REQYGDD-RQKMSQAMMTLYKKEKINPLGGCLPILVQMPVFLSLYWVLMESVELRHAPFM 467 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+ DP + PI+M LSM Q ++P P D QA I Sbjct: 468 LWINDLSYMDPYYVL-------------------PILMGLSMLGQQMLNPTPPDPMQARI 508 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + MP+ F F FP+GL++YW +N +SI+QQ VI K A Sbjct: 509 MKIMPIAFTFFFLWFPSGLVLYWVVNNTLSIIQQYVITKRIEA 551 >gi|254796769|ref|YP_003081605.1| inner membrane protein, 60 kDa [Neorickettsia risticii str. Illinois] gi|254590012|gb|ACT69374.1| inner membrane protein, 60 kDa [Neorickettsia risticii str. Illinois] Length = 585 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 191/571 (33%), Positives = 314/571 (54%), Gaps = 26/571 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M++ +N F+A LS +++ W + P E +E ++VK ++++ + Sbjct: 20 MQQTYNVFIATLLSFLVIIGWNLVFYNPAQRESLHEVPKRESVKVYESLESTLS------ 73 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + R+++ + L GSI L G DDL L+ Y D LL P+ TK AY Sbjct: 74 -------TERIKISSSKLEGSIQLTGLALDDLILKDYKSDDLKGQ--YRLLYPNKTKGAY 124 Query: 121 FAELDY-VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 F + + + P+S T W S ++LTP P+ + N + +LF+ +S+D++Y+ Sbjct: 125 FINPGWTIPGDAGLRTPSSKTKWQADS-ELLTPGNPVTFSWDNRSGLLFKVVVSVDDNYM 183 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F V N S + + I + P+T + + EG + V+ D+ L+E KYS I K Sbjct: 184 FTFKQIVENKSQNDLSVGSHFTITKRLPETNKSMLIMHEGPVGVIKDQ-LIELKYSKIAK 242 Query: 240 SSIS-----NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG-HARYQAKFSANE 293 + S + + W G SDKYW I + ++ D ++ + Sbjct: 243 KNKSIAFDEDAQNQHGWFGFSDKYWFVSQIFENSSDGKLYISHVDDKSDDIFRITNFNAQ 302 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + G IT LFAG K+ + Y +++ I F+ +D+G YFI KP+ L+ F Sbjct: 303 KIVRGGGFITKETMLFAGPKKLSLLEEYAQNMRIYLFDRAVDFGVLYFITKPISKLLQVF 362 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y+LVGNFG+AI+L T F+++L PL+ K +S +K +QP+I +++ ++ L + Sbjct: 363 YHLVGNFGVAIILLTFFIRVLMLPLSIKSGISMFKIKELQPEILKIKSIYQNDKD-ALNR 421 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A ++L++ H + P++GC P LLQ+PVFFA+YKVI I++EMR APF+ WI DL+ DPTN+ Sbjct: 422 ASVELFRKHRVTPMSGCLPTLLQVPVFFALYKVIFITIEMRQAPFFLWISDLSLPDPTNL 481 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-PADKGQAMILNWMPVVFVFALS 532 FTLFG++ + P F+ +GI PII+ L+M IQ K+SP D QA ++ MP VF+ + Sbjct: 482 FTLFGLINWNCPDFLSIGILPIILGLTMVIQQKLSPSHYEDGTQAFMIKAMPYVFMILFA 541 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 SFP+GL++YW ++N++S+VQQ +I + + Sbjct: 542 SFPSGLVLYWVFNNILSLVQQFMIGRYLFTK 572 >gi|315128186|ref|YP_004070189.1| preprotein translocase; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase [Pseudoalteromonas sp. SM9913] gi|315016699|gb|ADT70037.1| preprotein translocase; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase [Pseudoalteromonas sp. SM9913] Length = 544 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 137/569 (24%), Positives = 251/569 (44%), Gaps = 41/569 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +R + + + +S ++ W N Y P+ + QT+K + + Y D Sbjct: 4 QRTFLFIGLMLVSFLLFQEWNNDYNTPKAD----PSATTQTLKANSPESDDYVPASSDSG 59 Query: 62 AQA---LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A L+ +++ I+ KG + +L Y S+ P + L + Sbjct: 60 LPASTTLAKRSVIDITTDVFKVKIDTKGGDIVETDLINYKETKGSDVPYMLLGEFDGKQ- 118 Query: 119 AYFAELDYVSTANNIELPNSNTVWN--LISGKILTPTTPIKLVFKNANNILFERTISLDE 176 YF++ + N + S + + L F ++N + F +T + Sbjct: 119 -YFSQSGLIGLNGPDASANGRPTYQSEQTSYTLTGDELRVPLQFTDSNGVSFTKTYVFKK 177 Query: 177 H-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + V N + ++ +I R + + G ++ + +S Sbjct: 178 GQYDVGLEYKVNNTTSAPVQVQLYTQIKRTVQEKGSMVDQNYLGAAYGTDEEPYEKYSFS 237 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D+ ++ N + ++ Y+ S ++P ++ + L + Sbjct: 238 DMADKNL-NINTQGGYVAFIQHYFVSAWVPMQDQANT--LYSLITKSNAAIIGVKDEAVN 294 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G T + G KE + DL ++ +D+GW +FI++P+F+L+ + ++ Sbjct: 295 VQAGSEQVLTATYYMGPKESDKLEAIHTDL-----DLTVDYGWLWFISQPLFVLLKWLHS 349 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G+AI+ T+ VK L +PL K QY S A M+ +QPK+ L+EK+ Q +A Sbjct: 350 ILGNWGVAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMKALKEKYGDD-RQKFGQAT 408 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++Y+ +NP+ GC+PILLQ+P+F A++ V S E+RHA F W+ DL+A DP + Sbjct: 409 MEMYRKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFVLWLTDLSAKDPYYVL- 467 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534 PI+ SMFI K+ P D Q ++ +MPV+F F Sbjct: 468 ------------------PILFGASMFITQKLQPMTVTDPMQQKMMTFMPVIFSVFFLWF 509 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+GL++YW SN+ISIVQ +I + + Sbjct: 510 PSGLVLYWLVSNLISIVQMLIIYRGMEKK 538 >gi|289677544|ref|ZP_06498434.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. syringae FF5] gi|302185836|ref|ZP_07262509.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. syringae 642] gi|330898611|gb|EGH30030.1| membrane protein insertase [Pseudomonas syringae pv. japonica str. M301072PT] gi|330937304|gb|EGH41312.1| membrane protein insertase [Pseudomonas syringae pv. pisi str. 1704B] gi|330976398|gb|EGH76455.1| membrane protein insertase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 563 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 139/582 (23%), Positives = 235/582 (40%), Gaps = 53/582 (9%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL---- 57 + +AL+++ W Y + N + +A Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASADVPS 63 Query: 58 ---------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A++ + +K L +I+ G L L Y Sbjct: 64 ANATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVPF 123 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANN 165 L + + + A+ T V+ +V + N Sbjct: 124 QLFD-NGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKFSENG 182 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + + + Y + V N S + ++ R G Sbjct: 183 VNYIKRFTFKRGLYDLVMTYVVDNQSAQPWSGNLFAQLKRDASSDPSSTTATGTATYLGA 242 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI+K + W+ Y+ + +IP + Q + D Sbjct: 243 ALWTAAEPYKKVSMKDIDKGQVKE-TVQGGWVAWLQHYFVTAWIPDHNATNAVQTR--KD 299 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y F++ +++ PG T+ L+AG K + P E+ +D+G+ + Sbjct: 300 SQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDYGFLW 354 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 355 FIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLK 414 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ Sbjct: 415 EQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWIL 473 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 474 WITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKVM 514 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 515 KMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|66048358|ref|YP_238199.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. syringae B728a] gi|81307749|sp|Q4ZL11|OXAA_PSEU2 RecName: Full=Inner membrane protein oxaA gi|63259065|gb|AAY40161.1| 60 kDa inner membrane protein [Pseudomonas syringae pv. syringae B728a] gi|330970321|gb|EGH70387.1| membrane protein insertase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 563 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 139/582 (23%), Positives = 235/582 (40%), Gaps = 53/582 (9%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL---- 57 + +AL+++ W Y + N + +A Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASADVPS 63 Query: 58 ---------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A++ + +K L +I+ G L L Y Sbjct: 64 ANATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVPF 123 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANN 165 L + + + A+ T V+ +V + N Sbjct: 124 QLFD-NGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKFSENG 182 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + + + Y + V N S + ++ R G Sbjct: 183 VNYIKRFTFKRGLYDLVMTYVVDNQSAQPWSGNLFAQLKRDASSDPSSTTATGTATYLGA 242 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI+K + W+ Y+ + +IP + Q + D Sbjct: 243 ALWTAAEPYKKVSMKDIDKGQVKE-TVQGGWVAWLQHYFVTAWIPDHNATNAVQTR--KD 299 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y F++ +++ PG T+ L+AG K + P E+ +D+G+ + Sbjct: 300 SQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDYGFLW 354 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 355 FIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLK 414 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ Sbjct: 415 EQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWIL 473 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 474 WITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKVM 514 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 515 KMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|330952338|gb|EGH52598.1| membrane protein insertase [Pseudomonas syringae Cit 7] Length = 563 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 139/582 (23%), Positives = 236/582 (40%), Gaps = 53/582 (9%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL---- 57 + +AL+++ W Y + N + + +A Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASSTAPGIPDTAAGTNGSASADVPS 63 Query: 58 ---------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A++ + +K L +I+ G L L Y Sbjct: 64 ASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVPF 123 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANN 165 L + + + A+ T V+ +V + N Sbjct: 124 QLFD-NGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKFSENG 182 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + + + Y + V N S + ++ R G Sbjct: 183 VNYIKRFTFKRGLYDLVMTYVVDNQSAQPWSGNLFAQLKRDASSDPSSTTATGTATYLGA 242 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI+K + W+ Y+ + +IP + Q + D Sbjct: 243 ALWTAAEPYKKVSMKDIDKGQVKE-TVQGGWVAWLQHYFVTAWIPDHNATNAVQTR--KD 299 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y F++ +++ PG T+ L+AG K + P E+ +D+G+ + Sbjct: 300 SQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDYGFLW 354 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 355 FIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLK 414 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ Sbjct: 415 EQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWIL 473 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 474 WITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKVM 514 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 515 KMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|119947213|ref|YP_944893.1| 60 kDa inner membrane insertion protein [Psychromonas ingrahamii 37] gi|166977402|sp|A1T0M9|OXAA_PSYIN RecName: Full=Inner membrane protein oxaA gi|119865817|gb|ABM05294.1| protein translocase subunit yidC [Psychromonas ingrahamii 37] Length = 566 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 158/535 (29%), Positives = 248/535 (46%), Gaps = 43/535 (8%) Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 V NS D + L S V + N L +I+L G +L + + S++P Sbjct: 61 VPNSPQQSSTDATSTELPASQSVTIANDELRLTISLVGGDIIKADLLQHDATLDSDTPYR 120 Query: 109 TLLSPSNTKNAYFAELDYVSTA------NNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 L S Y A+ + ++T L G+ T L F + Sbjct: 121 LL--DSGNGFTYIAQSGLIGQGPDANKNGRPLYDTTDTESVLADGQAEVSTM---LHFVD 175 Query: 163 ANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGF 220 A+ +F +T +L Y+ + + N + + ++ + + V G Sbjct: 176 ADGNIFIKTFTLKRGEYVTNVAYQIENKTDSPLNVQLYAQLRETLSDDSGSMVMPVYRGG 235 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + +SD++ + E W+ + Y+ S +IPS + D Sbjct: 236 AFSTTETRYEKYSFSDMQDGPLQKTTE-GGWVAMLQHYFVSAWIPSPTDQNVLYSNIIQD 294 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 A F A TI P L+ G K + K+L ++ +D+GW + Sbjct: 295 KEA--AIGFKAPSKTIAPQSVAELETNLWVGPKIQEEMALVAKNL-----DLTVDYGWLW 347 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ +F +VGN+G+AI+L T VK +PL K QY S A M+ +QPKI ELR Sbjct: 348 FIAQPLFKLLLFFQGIVGNWGVAIILITFTVKGALYPLTKAQYTSMAKMRLLQPKIKELR 407 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F + Q + KAM++LYK +NPL GC+PILLQ+P+F A+Y + S+E+RHAPF Sbjct: 408 EQFGED-RQKVSKAMMELYKKEKVNPLGGCFPILLQMPIFIALYWSLMESVELRHAPFML 466 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMI 519 WI+DL+ DP I PI+M +SMF KMSP D Q + Sbjct: 467 WIQDLSVQDPYYIL-------------------PILMGVSMFFIQKMSPTTVQDPMQQKV 507 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 + +MPV+F F FPAGL++YW SNV++++QQ +I + + GL + + Sbjct: 508 MQFMPVIFTFFFLWFPAGLVLYWLMSNVVTLIQQTLIYRSFEKK-GLHQKEKEPV 561 >gi|88705404|ref|ZP_01103115.1| Inner membrane protein oxaA [Congregibacter litoralis KT71] gi|88700494|gb|EAQ97602.1| Inner membrane protein oxaA [Congregibacter litoralis KT71] Length = 580 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 150/602 (24%), Positives = 268/602 (44%), Gaps = 73/602 (12%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYP----RIEEMNNERKNIQTVKQP-------- 46 M+ + + LS +++ W NF E + Q+ +P Sbjct: 1 MDIQRTLLIGAIMLLSFMLLTEWVNFKAVKDDVISTETRLTAGPDTQSSNKPITGMTDTG 60 Query: 47 ---------------------NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLK 85 V + D + + + +++ SL +I+LK Sbjct: 61 DLPSAAAAPAVAEPTIGIEDIPAVGAAVDTSTEDTGSGSGNNGNIIQVYTDSLQLAIDLK 120 Query: 86 GAQFDDLNLRGYHLDVS-SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNL 144 G ++ L + D+ ++P V L +N++ Y A+ + +N Sbjct: 121 GGDIVEVALPKFLADIDDPDTPFVLL--ENNSRRVYVAQSGLIGKNGIDSKARANYQSTA 178 Query: 145 ISGKI-LTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRI 202 ++ T + L + N I + + Y+ + + N S + + + G+I Sbjct: 179 SRYEMGAADTLEVDLTWSNDAGIEVTKRFRFLRDSYVVDVDFIINNQSSEAWQGNLFGQI 238 Query: 203 MRHKPQTATNTFGV-----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257 R + G G + D + + D++ W+ + Sbjct: 239 KRDSSAADSGGGGSMGMQPFLGAATTMPDDRFKKFSFEDMQDDPFRE-QNIGGWIAMIQH 297 Query: 258 YWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317 Y+ S +IP+ E + + + G A F++ + + PG + +AG K+ + Sbjct: 298 YFLSAWIPNPEKTHTYSTRVTNSGFNI--AGFTSPAVVVAPGAQQEVSARFYAGPKDQYS 355 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + P E+ +D+GW +++A+P+F L++ + +VGN+G+AI+L TV +K +FF Sbjct: 356 LQEIS-----PFLELSVDYGWLWWVAQPLFWLLTKIFAVVGNWGVAIILLTVLIKAVFFK 410 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 L+ Y S ANM+ +QPK+ ++RE++ Q +AM++LYK INP+ GC PIL+Q+ Sbjct: 411 LSATSYKSMANMRRVQPKMADIREQYADDK-QKQSQAMMELYKKEKINPMGGCLPILVQM 469 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 PVF A+Y ++ S+E+RHAPF WI DL+ DP + P++M Sbjct: 470 PVFIALYWMLMESVELRHAPFMLWIDDLSVMDPYFVL-------------------PLMM 510 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 SMF K++PPP D QA I+ W+PV+F F FPAGL++YW +N++S+ QQ VI Sbjct: 511 GASMFFMQKLNPPPPDPMQAKIMQWLPVIFTFFFLWFPAGLVLYWVVNNLLSMAQQYVIT 570 Query: 558 KM 559 + Sbjct: 571 RQ 572 >gi|187930818|ref|YP_001901305.1| putative inner membrane protein translocase component YidC [Ralstonia pickettii 12J] gi|309780186|ref|ZP_07674937.1| membrane protein insertase, YidC/Oxa1 family [Ralstonia sp. 5_7_47FAA] gi|254773015|sp|B2U820|OXAA_RALPJ RecName: Full=Inner membrane protein oxaA gi|187727708|gb|ACD28873.1| 60 kDa inner membrane insertion protein [Ralstonia pickettii 12J] gi|308920889|gb|EFP66535.1| membrane protein insertase, YidC/Oxa1 family [Ralstonia sp. 5_7_47FAA] Length = 554 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 150/577 (25%), Positives = 247/577 (42%), Gaps = 55/577 (9%) Query: 5 WNYFVAIALSVIIVYA---WQ--------NFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53 + + S+ +V WQ F + P+ + Sbjct: 4 KRTILWVIFSLAVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGSTPAGDVPSNASTAA 63 Query: 54 AAVLI----DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 AA A S ++ + L +I+ GA L L + + Sbjct: 64 AAGSQAAPATGAASQAPASEKIVISTDLLRATIDTDGAIVTKLELLDQK---DHDGNPMV 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG-KILTPTTPIKLVFK-NANNIL 167 L S + Y A + + PN TV+ G + L + + + Sbjct: 121 LFDRS-VERTYLARSGLIGG----DFPNHTTVFAASPGPRDLGTGNDVSITLTADKGGAK 175 Query: 168 FERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLG 225 +T Y+ VTN+ I + + R + + G Sbjct: 176 LAKTYVFKRGSYVIDSRFDVTNDGTAPINPTLYLELARDGGAVEQSRFYSTFTGPAVYTD 235 Query: 226 DKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 + ++DI+K +N W+ + Y+AS +IP+ + Sbjct: 236 GDKFHKITFADIDKGKAQVPAPTNSGWVAMVQHYFASAWIPADNVKREYYVNRVDTN--F 293 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y+ T+ PG S++TT LFAG ++ + P +++ D+GW +AK Sbjct: 294 YRIGIQEPLGTVAPGASVSTTARLFAGPQQARMLEAIT-----PGLDLVKDYGWLTIVAK 348 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + L+GN+G +I+ TV +KL+FFPL+ Y S A MK++QP++ +RE+ K Sbjct: 349 PLFWLLEKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHK 408 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 P Q + + M+ LY+T +NPL GC PI++QIPVF A+Y + S+EMR AP+ GW+ D Sbjct: 409 GDP-QKMNQEMMTLYRTEKVNPLGGCLPIVIQIPVFMALYWALLSSVEMRGAPWIGWVHD 467 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I P++M++SMF+Q K++P P D QA ++ +MP Sbjct: 468 LSTPDPFYIL-------------------PVLMAVSMFVQTKLNPTPPDPVQAKVMMFMP 508 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + F FPAGL++YW +N +SI QQ I +M G Sbjct: 509 IAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 545 >gi|262281558|ref|ZP_06059337.1| preprotein translocase subunit YidC [Acinetobacter calcoaceticus RUH2202] gi|262257017|gb|EEY75756.1| preprotein translocase subunit YidC [Acinetobacter calcoaceticus RUH2202] Length = 586 Score = 442 bits (1136), Expect = e-121, Method: Composition-based stats. Identities = 150/599 (25%), Positives = 258/599 (43%), Gaps = 71/599 (11%) Query: 3 RNWNYFVAIALSV----IIVYAWQNFYVYPRIEEMNNERK-----------NIQTVKQPN 47 + W F + +++ AWQ Y N + + Sbjct: 2 QQWARFAILGAMFVTAYLLILAWQKDYGNAATAPQKQAAAVSSHEVSADLPNAKNATVAS 61 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 V + A A A + ++ IN KG + L + S+ P Sbjct: 62 DVPQANIAQSQTTDATAPVNQQLISVQTDLYHIWINPKGGDIVRIELLSHDKSKDSDQPF 121 Query: 108 VTLLSPSNTKNAYFAELDYVS-------TANNIELPNSNTVWNLISGKILTPT------- 153 V L +++K Y A+ + T + L K + Sbjct: 122 VML--ENDSKRTYVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQKGQSEKV 179 Query: 154 TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT--- 209 + +VFK + +T + + Y + V N S + G++ R Sbjct: 180 LNVPMVFKTPEGVEIIKTFTFTQGQYPIVVRHQVINRSQQSWQGQMFGQLKRDNSDDPGK 239 Query: 210 ---ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP- 265 T G G + + K+++ + +S W+ I Y+ S +IP Sbjct: 240 SSQGIFTLGTFLGGAWGTPESHYNKLKFANFSEEKVST-EAKGGWVAIVQHYFVSAWIPG 298 Query: 266 ------SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 + + ++ + F++ I + G S+ L++G K + Sbjct: 299 NLKLTQANGQPYVAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQAEL- 357 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 KDLA+ +D+GW + IAK +F+ + +F+++VGN+G +I+L TV VK++ +PL+ Sbjct: 358 ---KDLAV-GLNQTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTVMVKMILWPLS 413 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K Y S A M+ I P++ ++E+F + + Q M+ LYK +NPL+GC P+LLQ+P+ Sbjct: 414 SKSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPI 472 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F A+Y V+ S+E+RHAP+ GWI+DL+A DP I P+IM + Sbjct: 473 FLALYWVLMESVELRHAPWLGWIQDLSAMDPWFIL-------------------PLIMGV 513 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MF+Q ++P PAD QA + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 514 TMFVQQMLNPQPADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINK 572 >gi|299772121|ref|YP_003734147.1| putative inner membrane protein translocase component YidC [Acinetobacter sp. DR1] gi|298702209|gb|ADI92774.1| putative inner membrane protein translocase component YidC [Acinetobacter sp. DR1] Length = 586 Score = 442 bits (1136), Expect = e-121, Method: Composition-based stats. Identities = 152/599 (25%), Positives = 256/599 (42%), Gaps = 71/599 (11%) Query: 3 RNWNYFVAIALSV----IIVYAWQNFYVYPRIEEMNNERK-----------NIQTVKQPN 47 + W F + +++ AWQ Y N + + Sbjct: 2 QQWARFAILGAMFVTAYLLILAWQKDYGNAATAPQKQAAAVSSHEVSADLPNAKNATVAS 61 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 V + A A A + ++ IN KG + L + S+ P Sbjct: 62 DVPQANIAQSQTTDATAPVNQQLISVQTDLYHIWINPKGGDIVRIELLSHDKSKDSDQPF 121 Query: 108 VTLLSPSNTKNAYFAELDYVS-------TANNIELPNSNTVWNLISGKILTPT------- 153 V L ++TK Y A+ + T + L K + Sbjct: 122 VML--ENDTKRTYVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQNQKGQSEKV 179 Query: 154 TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT--- 209 + +VFK + +T + + Y + V N S + G++ R Sbjct: 180 LNVPMVFKTPEGVEIIKTFTFTQGQYPIVVRHQVINRSQQSWQGQMFGQLKRDNSDDPGK 239 Query: 210 ---ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP- 265 T G G D + K+++ + + N W+ I Y+ S +IP Sbjct: 240 SSQGIFTLGTFLGGAWGTPDSHYNKLKFANFSEEKV-NTEAKGGWVAIVQHYFVSAWIPG 298 Query: 266 ------SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 + + ++ + F++ I + G S+ L++G K + Sbjct: 299 NLKLTQANGQPYVAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSEL- 357 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 KDLA+ +D+GW + IAK +F+ + +F+++VGN+G +I+L TV VK++ +PL+ Sbjct: 358 ---KDLAV-GLNQTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTVMVKMILWPLS 413 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K Y S A M+ I P++ ++E+F + + Q M+ LYK +NPL+GC P+LLQ+P+ Sbjct: 414 SKSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPI 472 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F A+Y V+ S+E+RHAP+ GWI+DL+A DP I P+IM Sbjct: 473 FLALYWVLMESVELRHAPWLGWIQDLSAMDPWFIL-------------------PLIMGA 513 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MF Q ++P PAD QA + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 514 TMFAQQMLNPQPADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINK 572 >gi|289628218|ref|ZP_06461172.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649108|ref|ZP_06480451.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. aesculi str. 2250] gi|298484605|ref|ZP_07002710.1| integral membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160862|gb|EFI01878.1| integral membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330870071|gb|EGH04780.1| membrane protein insertase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 563 Score = 442 bits (1136), Expect = e-121, Method: Composition-based stats. Identities = 139/582 (23%), Positives = 235/582 (40%), Gaps = 53/582 (9%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL---- 57 + +AL+++ W Y + N + +A Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASADVPS 63 Query: 58 ---------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A++ + +K L +I+ G L L Y Sbjct: 64 ASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVPF 123 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANN 165 L + + + A+ T V+ +V + N Sbjct: 124 QLFD-NGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKFSENG 182 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + + + Y + V N S + ++ R G Sbjct: 183 VNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATYLGA 242 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI+K + W+ Y+ + +IP + Q + D Sbjct: 243 ALWTAAEPYKKVSMKDIDKGQVKE-TVQGGWVAWLQHYFVTAWIPDHNATNAVQTR--KD 299 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y F++ +++ PG T+ L+AG K + P E+ +D+G+ + Sbjct: 300 SQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDYGFLW 354 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 355 FIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLK 414 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ Sbjct: 415 EQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWIL 473 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 474 WITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKVM 514 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 515 KMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|238028969|ref|YP_002913200.1| putative inner membrane protein translocase component YidC [Burkholderia glumae BGR1] gi|237878163|gb|ACR30496.1| Putative inner membrane protein translocase component YidC [Burkholderia glumae BGR1] Length = 553 Score = 441 bits (1135), Expect = e-121, Method: Composition-based stats. Identities = 154/586 (26%), Positives = 253/586 (43%), Gaps = 56/586 (9%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDN------- 51 M+ I ++ WQ + + N + N+ K Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRAHGRQSMFFPNVTQTNVAASKGGADTGASAASGAT 60 Query: 52 ---SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP-- 106 A+ ++ + V G I+ +G L L+ + P Sbjct: 61 AALPAASTQAPAATTPIAQAQLVPFSTDVYDGEIDTRGGTLTKLTLKK---EGDGKQPDL 117 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVFKN-- 162 VTL + + Y A PN N ++ +SG + +KL F++ Sbjct: 118 FVTLFDHT-KDHTYLARTGVTGG----NFPNHNDLFTPLSGPRSLAAGQDTLKLSFESQE 172 Query: 163 ANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGF 220 + +T + Y+ + + N + + I+R T F G Sbjct: 173 KGGVKVVKTYTFTRGSYVIGVDTKIENVGTAPVTPTVYMEIVRDSTPVETPLFSHTFLGP 232 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 K + +SDI+K+ + N W+ + Y+AS +IP + + Sbjct: 233 AVYTDQKHFQKITFSDIDKNKAEYVTSADNGWVAMVQHYFASAWIPQAGVKRDIYVEKID 292 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 + Y+ TI PG+S + LFAG +E + P +++ D+GW Sbjct: 293 P--SLYRIGVKEPVKTIEPGQSADVSARLFAGPEEERVLEGI-----APGLDLVKDYGWV 345 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 IAKP+F L+ + VGN+G +I+L TV +K +FFPL+ Y S A MK I P++ +L Sbjct: 346 TIIAKPLFWLLQKIHGYVGNWGWSIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQQL 405 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ Sbjct: 406 RERFKSDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWI 464 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+ DP I P++M+ SMF+Q +++P P D QA + Sbjct: 465 LWIHDLSQRDPYFIL-------------------PVLMAGSMFLQTRLNPTPPDPVQAKM 505 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + +MP+ F FPAGL++Y+ +NV+SI QQ I + G + Sbjct: 506 MMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRAIGNKKK 551 >gi|90023654|ref|YP_529481.1| protein translocase subunit yidC [Saccharophagus degradans 2-40] gi|122995696|sp|Q21DG0|OXAA_SACD2 RecName: Full=Inner membrane protein oxaA gi|89953254|gb|ABD83269.1| protein translocase subunit yidC [Saccharophagus degradans 2-40] Length = 557 Score = 441 bits (1135), Expect = e-121, Method: Composition-based stats. Identities = 141/578 (24%), Positives = 248/578 (42%), Gaps = 55/578 (9%) Query: 5 WNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N +A L + ++ W F ++ + N+ + T + A + + Sbjct: 5 RNSLIAAILVITYVLFIRWNEFSERQQVPTIANQPAAVTTPAYEAVPSDDAVASSATEES 64 Query: 63 Q---------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV-SSNSP 106 A+ V +K L I+ G + L + D N P Sbjct: 65 DVPEVSVSAEPVAAPKAVYQPKLVTVKTDVLEVQIDTNGGDVLQVVLLKHLADKADDNQP 124 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPIKLVFKNA 163 V + N+ + Y A +++ + L Sbjct: 125 FVLMT--QNSAHTYVARSGLAGGNGPDGAKKGRAKYSVAKTNYSLNSDDQVVVDLTLDQE 182 Query: 164 NNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 N + + + YL + +TN + G+I+R + + G++ A Sbjct: 183 N-AQITKRFTFTKSSYLIDVEYIITNRADTPWAAKLYGQIIRDGSEPSYGYMGMRPYLGA 241 Query: 223 V--LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + + + D++ + W+ + Y+ S +IP K+ + + S Sbjct: 242 AITTPEVNYEKVSFDDMDDGPFK-VEQKGGWVSLIQHYFISAWIPPKDATNSYELSKSSK 300 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G+ Y +F + T+ P T +AG K + P ++ ID+ + + Sbjct: 301 GN--YVLRFISETTTVAPHSVGTVKAGFYAGPKNIRRLEEIS-----PHLDLTIDYSFLW 353 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIAKP+F + + + LVGN+G+AI+L TV +K +FF + Y S A M+ +QP + EL+ Sbjct: 354 FIAKPLFFALDFIHGLVGNWGVAIILLTVLIKAVFFYPSAMSYRSMAKMRKLQPMMAELK 413 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E++ + Q + +++LYK +NP GC PILLQ+PVF ++Y +I S+E+RH PF+ Sbjct: 414 ERYGEDK-QKMSGELMKLYKKEKVNPFGGCLPILLQMPVFISLYWMIMESVELRHQPFFL 472 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI+DL+ DP I P++M ++M+IQ K++P P D QA ++ Sbjct: 473 WIQDLSVKDPLFIL-------------------PLLMGVTMYIQQKLNPTPPDPMQAKVM 513 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MP+ F F FPAGL++YW +N +SI QQ VI + Sbjct: 514 QMMPIGFTFLFMFFPAGLVLYWVVNNTLSISQQYVITR 551 >gi|71736510|ref|YP_277293.1| inner membrane protein translocase component YidC [Pseudomonas syringae pv. phaseolicola 1448A] gi|123634467|sp|Q48BF2|OXAA_PSE14 RecName: Full=Inner membrane protein oxaA gi|71557063|gb|AAZ36274.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. phaseolicola 1448A] Length = 563 Score = 441 bits (1135), Expect = e-121, Method: Composition-based stats. Identities = 140/582 (24%), Positives = 235/582 (40%), Gaps = 53/582 (9%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL---- 57 + +AL+++ W Y + N + +A Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASADVPS 63 Query: 58 ---------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A++ + +K L +I+ G L L Y Sbjct: 64 ASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVPF 123 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANN 165 L + + + A+ T V+ +V + N Sbjct: 124 QLFD-NGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKFSENG 182 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + + + Y + V N S + ++ R G Sbjct: 183 VNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATYLGA 242 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI+K I W+ Y+ + +IP + Q + D Sbjct: 243 ALWTAAEPYKKVSMKDIDKGQIKE-TVQGGWVAWLQHYFVTAWIPDHNATNAVQTR--KD 299 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y F++ +++ PG T+ L+AG K + P E+ +D+G+ + Sbjct: 300 SQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDYGFLW 354 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 355 FIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLK 414 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ Sbjct: 415 EQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWIL 473 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 474 WITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKVM 514 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 515 KMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|88860620|ref|ZP_01135257.1| preprotein translocase [Pseudoalteromonas tunicata D2] gi|88817215|gb|EAR27033.1| preprotein translocase [Pseudoalteromonas tunicata D2] Length = 545 Score = 441 bits (1135), Expect = e-121, Method: Composition-based stats. Identities = 143/570 (25%), Positives = 246/570 (43%), Gaps = 38/570 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME F+ I L ++ +Q + ++ + + Q +++ D Sbjct: 1 MESQR-TFLFIGLLLVSFLLFQEWNNDYNPQQQAVQSASTQVKDATQSTGDTFIPSSSDS 59 Query: 61 RAQALSMSPR---VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 P + + L ++ KG + +L Y + P + L T Sbjct: 60 SVPGQIQRPSQSYISVTTDVLKVKLDTKGGDIVEADLIQYPEKQHGDVPFMLL--GEFTG 117 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLI--SGKILTPTTPIKLVFKNANNILFERTISLD 175 N YF++ + V++ S + I L + + I F +T Sbjct: 118 NQYFSQSGLIGIDGPDASQQGRPVYSAEQQSYTLANDELRIPLTYVSDAGIEFVKTYVFK 177 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 + Y + T+ N S + ++ R + GF +K + + Sbjct: 178 KGDYAVDVEYTINNKSANPATVQLFTQVKRTIQAKGSMVDQSYLGFAYGAFEKPYEKYSF 237 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 SDIE ++S ++ Y+ S ++P ++ + LSD A Sbjct: 238 SDIEDKNLS-IDTQGGYISFIQHYFVSAWVPKQDEQNTIYSRKLSDNSAMM--GIKGPLT 294 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G+ + + G K+ + DL + +D+G +FI++P+F L+ + Y Sbjct: 295 TIEAGQQQQLASTYYMGPKDQEALKALHDDLH-----LTVDYGILWFISQPLFALLKWLY 349 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 L+GN+G+AI+ T+ VK +PL K QY S A M+N+QPKI L+EK + Q +A Sbjct: 350 ALLGNWGLAIISITIIVKTFLYPLTKAQYTSMAKMRNLQPKIMALKEKHGEDK-QKFGQA 408 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M+++Y+ +NP+ GC+P+LLQ+P+F A++ V S+E+RHA F WI DL+A DP I Sbjct: 409 MMEMYRKEKVNPMGGCFPLLLQMPIFLALFYVFLESVELRHAEFGLWIMDLSAKDPYYIL 468 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 PI+ SMF+ K+ P D Q ++ +MPV+F Sbjct: 469 -------------------PILFGASMFLTQKLQPMTVTDPMQQKMMTYMPVIFSVFFLW 509 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+ISI Q +I + + Sbjct: 510 FPSGLVLYWLVSNLISIAQMLIIYRGMEKK 539 >gi|332533704|ref|ZP_08409563.1| OxaI/YidC membrane insertion protein [Pseudoalteromonas haloplanktis ANT/505] gi|332036868|gb|EGI73329.1| OxaI/YidC membrane insertion protein [Pseudoalteromonas haloplanktis ANT/505] Length = 545 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 256/572 (44%), Gaps = 42/572 (7%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME + + + +S ++ W N Y P+ + QT++ + + Y Sbjct: 1 MESQRTFLLIGLMLVSFLLFQEWDNDYNKPKAD----PSATTQTLQANSPESDDYIPSSS 56 Query: 59 DDRAQA---LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 D A L+ +E+ I+ KG + +L Y S +P + LL + Sbjct: 57 DSGLPASATLAKRSVIEITTDVFKVKIDTKGGDIVETDLLQYEKTKGSETPYM-LLGQLD 115 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLI--SGKILTPTTPIKLVFKNANNILFERTIS 173 + YF++ + N ++ S + + L F ++N + F +T Sbjct: 116 SGKQYFSQSGLIGLNGPDASANGRPTYSTEQKSYTLTGDELRVPLQFTDSNGVSFTKTYV 175 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 + Y + + N + ++ +I R + + G ++ + Sbjct: 176 FKKGQYDVGLEYKINNTTSAPLQVQLYTQIKRTVQEKGSMVDQNYLGAAYGTDEEPYEKY 235 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 +SD+ ++ N + ++ Y+ S ++P ++ + A AK Sbjct: 236 SFSDMADKNL-NKNTQGGYVAFIQHYFVSAWVPMQDQTNTIYSLITKSNAAIIGAK--DP 292 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + I G T T + G KE + P ++ +D+GW +FI++P+F+L+ + Sbjct: 293 AVNIQAGSEQTLTATYYMGPKESDILEAIH-----PDLDLTVDYGWLWFISQPLFVLLKW 347 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++++GN+G+AI+ T+ VK L +PL K QY S A M+ +QPK+ L+EKF Q Sbjct: 348 LHSILGNWGVAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMAALKEKFGDD-RQKFG 406 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 +A +++YK +NP+ GC+PILLQ+P+F A++ V S E+RHA F W+ DL+A DP Sbjct: 407 QATMEMYKKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFIFWLTDLSAQDPYY 466 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 + PI+ SMF+ K+ P D Q ++ +MPV+F Sbjct: 467 VL-------------------PILFGASMFVTQKLQPMTVTDPMQQKMMTFMPVIFSVFF 507 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+ISIVQ +I + + Sbjct: 508 LWFPSGLVLYWLVSNLISIVQMLIIYRGMEKK 539 >gi|257485603|ref|ZP_05639644.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011891|gb|EGH91947.1| membrane protein insertase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 563 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 140/582 (24%), Positives = 235/582 (40%), Gaps = 53/582 (9%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL---- 57 + +AL+++ W Y + N + +A Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASADVPS 63 Query: 58 ---------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A++ + +K L +I+ G L L Y Sbjct: 64 ASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVPF 123 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANN 165 L + + + A+ T V+ +V + N Sbjct: 124 QLFD-NGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKFSENG 182 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 I + + + Y + V N S + ++ R G Sbjct: 183 INYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATYLGA 242 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI+K + W+ Y+ + +IP + Q + D Sbjct: 243 ALWTAAEPYKKVSMKDIDKGQVKE-TVQGGWVAWLQHYFVTAWIPDHNATNAVQTR--KD 299 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y F++ +++ PG T+ L+AG K + P E+ +D+G+ + Sbjct: 300 SQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDYGFLW 354 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 355 FIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLK 414 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ Sbjct: 415 EQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWIL 473 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 474 WITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKVM 514 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 515 KMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|56461737|ref|YP_157018.1| preprotein translocase subunit YidC [Idiomarina loihiensis L2TR] gi|56180747|gb|AAV83469.1| Preprotein translocase subunit YidC [Idiomarina loihiensis L2TR] Length = 530 Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 137/542 (25%), Positives = 242/542 (44%), Gaps = 36/542 (6%) Query: 28 PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPR-VELKNPSLIGSINLKG 86 P N + P+ A V D+ + V ++ L I+ +G Sbjct: 11 PENVTSTQSSNNAENSDVPSGSSAVSADVPESDQPVVAQRAETTVHVRTDVLDVEIDTRG 70 Query: 87 AQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLI 145 +L + S L + SN N Y A+ + + + + + Sbjct: 71 GDVVSTHLLKFAKTQGSEERFQLLQNSSN--NVYVAQSGLIGPDGIDGKDGRPSYNYEQE 128 Query: 146 SGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR 204 S + + + L + N ++ + + Y + V NN+ + G++ R Sbjct: 129 SYESTSEVIEVPLTYTAENGAVYRKVFTFTPGKYTVDVRYEVENNTSKTLETQFYGQLKR 188 Query: 205 HKPQTATNTFGVQEGFIAVLG--DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASV 262 + + + F A + + + ++ + N W+G+ + Y+ S Sbjct: 189 SVHSGESGSMIMPTYFGAAYSYDEDKFEKYDFDSMQDKKL-NVTSQTGWVGMLEHYFVSA 247 Query: 263 FIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 ++P + + + A + I PG S T + +F G K+ + Sbjct: 248 WVPKQGQQNRLYSRVANGSQAIIGVIY--PMTDIQPGSSKTIESQVFLGPKDQDAMAEV- 304 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 + ++ +D+G+ +++A+P+F L+ + ++V N+G+AI+LTTV VK L FPL K Q Sbjct: 305 ----VEYLDLTVDYGFLWWLAQPIFKLLQFLQSIVINWGLAIILTTVIVKALLFPLTKAQ 360 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 YVS A M+ +QPK+ LRE++ Q + AM++LYK +NPL GC P+LLQ+P+F A Sbjct: 361 YVSMAKMRMLQPKMTALRERYGDD-RQKMSGAMMKLYKEEKVNPLGGCLPMLLQLPIFLA 419 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y V+ S+E+RH+ F WI+DL+ DP I PI+M SMF Sbjct: 420 LYWVLLESVELRHSAFVFWIQDLSTKDPYYIL-------------------PILMGASMF 460 Query: 503 IQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + ++ P P AD Q + +MPV+F FP+GL++YW SN+I+I Q +I + Sbjct: 461 LMQRLQPTPTADPMQQKLFQYMPVIFTVFFLWFPSGLVLYWLVSNLITIAQMLIIYRGLE 520 Query: 562 AE 563 + Sbjct: 521 KK 522 >gi|319940691|ref|ZP_08015033.1| inner membrane protein oxaA [Sutterella wadsworthensis 3_1_45B] gi|319805842|gb|EFW02609.1| inner membrane protein oxaA [Sutterella wadsworthensis 3_1_45B] Length = 565 Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 148/586 (25%), Positives = 257/586 (43%), Gaps = 57/586 (9%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEE---MNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + L + W N+ V+ E + V + A Sbjct: 6 QRALLWVILFGSLFMLWDNYQVWKGGESFFGSVKQEAIEADRSAAAGVPTATVAKTAPAL 65 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL----------------DVSSNS 105 A ++ + + + + + GA+ + + + S N Sbjct: 66 DDATAVKEPIVVTTDRMKVTFDRMGARIVGSEMLLFPQQADWTEVGLAGMVLGREPSPNL 125 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI-LTPTTPIKLVFK-NA 163 V L +AY A+ V + P N + L+S + L +K+VF+ + Sbjct: 126 GNVKLFDVEGG-HAYLAQTGLVGG----DYPTHNDEFKLVSQDLALGDKESMKVVFEADK 180 Query: 164 NNILFERTISLDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGF 220 + +T + Y + VTN + + ++ R KP ++ + G Sbjct: 181 GGLKVTKTFTFKRGYYGIDVDTAVTNTTDKAVTPQIYYQLTRDSSKPAGESSMYSTFTGP 240 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 +++ + +S+I ++ N WL + ++ S ++P + H+ + L Sbjct: 241 AFYTDEENFQKLSFSEIRDKDAKYVEDTNNGWLAMVQHHFVSAWVPPQGEVRHNYTRAL- 299 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 GH + + I PG + T L++G +E + P E+++D+GW Sbjct: 300 -GHDLFAVGTLISLKEIAPGATQTNHAVLYSGPQEQARLEQL-----APGLELVVDYGWL 353 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 F+AKP++ L+ + Y +VGN+G AI+L T VK + +P++ Y S A MK + P++ L Sbjct: 354 TFLAKPIYWLLDFLYGIVGNWGWAIVLLTCIVKAVLYPISAAGYRSMARMKEVTPRLKAL 413 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +EK+K Q L +AM++LYKT INP+ GC PI+LQIPVF A+Y V+ S+E+R A + Sbjct: 414 QEKYKDDK-QRLNQAMMELYKTEKINPVGGCLPIMLQIPVFLALYWVLQGSVELRGAEWI 472 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 W+ DLA DP + P +M+ +MF+Q+ ++P P D QA + Sbjct: 473 LWVHDLAMPDPWFVL-------------------PALMAATMFLQILLNPKPTDPMQAKV 513 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + MPVVF F AGL++YW +N++SI QQ I K E Sbjct: 514 MYIMPVVFSVMFFIFAAGLVLYWLTNNILSIAQQWWINKTIAEERA 559 >gi|330987015|gb|EGH85118.1| membrane protein insertase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 563 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 139/582 (23%), Positives = 236/582 (40%), Gaps = 53/582 (9%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL---- 57 + +AL+++ W Y + N + +A Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASADVPS 63 Query: 58 ---------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A++ + +K L +I+ G L L Y Sbjct: 64 ASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVPF 123 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANN 165 L + + + A+ T V+ +V + N Sbjct: 124 QLFD-NGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKFSENG 182 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + + + Y + V N S + + ++ R G Sbjct: 183 VNYIKRFTFKRGLYDLVMTYVVDNQSAQRWAGNLFAQLKRDASSDPSSTTATGTATYLGA 242 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI+K + W+ Y+ + +IP + Q + D Sbjct: 243 ALWTAAEPYKKVSMKDIDKGQVKE-TVQGGWVAWLQHYFVTAWIPDHNATNAVQTR--KD 299 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y F++ +++ PG T+ L+AG K + P E+ +D+G+ + Sbjct: 300 SQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDYGFLW 354 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 355 FIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLK 414 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ Sbjct: 415 EQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWIL 473 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 474 WITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKVM 514 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 515 KMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|319765065|ref|YP_004129002.1| membrane protein insertase, yidc/oxa1 family domain containing [Alicycliphilus denitrificans BC] gi|330827257|ref|YP_004390560.1| membrane protein insertase, YidC/Oxa1 family domain-containing [Alicycliphilus denitrificans K601] gi|317119626|gb|ADV02115.1| membrane protein insertase, YidC/Oxa1 family domain containing [Alicycliphilus denitrificans BC] gi|329312629|gb|AEB87044.1| membrane protein insertase, YidC/Oxa1 family domain containing [Alicycliphilus denitrificans K601] Length = 564 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 139/587 (23%), Positives = 243/587 (41%), Gaps = 58/587 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNERKNIQT-------V 43 M + + +V W F+ P + + V Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQIHNGNKATFFPTPPAQTASAPAVAASAAGAASVPV 60 Query: 44 KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 + A + RV + L + + G L Y Sbjct: 61 ASSAAPGAAAQPPAGSPVQPAATPRERVTVSTDVLRLAFDTDGGSLVQGELLKYPEMGDK 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVFK 161 P LL + Y A+ + A P T L+ G ++ +++ F+ Sbjct: 121 AKPF--LLLDESADRVYVAQTGLIGGA----FPTHKTPMALVPGPRELKDGENELQVRFE 174 Query: 162 NAN--NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGV 216 + + + +T L Y + V N + +++R KP ++ + Sbjct: 175 SPDLGGVKLVKTWMLKRGAYDIAVRHEVVNTGTAPVSPQLYLQLVRDGNKPAGESSFYST 234 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G K + ++ DIE + +N ++ + Y+A+ ++ + + Sbjct: 235 FTGPAVYTEAKKYHKVEFKDIESGKAEIDKSSTNGYVAMVQHYFATAWLLADGVQRDNFV 294 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + + Y A I PG+S + LFAG + + P E++ D Sbjct: 295 RKVDAN--LYSVGMIAQLGEIAPGQSKSMDARLFAGPQIETLLEKL-----APGLELVKD 347 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +AKP++ L+ + ++ N+G +I+ V +K+ F+ L K Y S A MK I P+ Sbjct: 348 YGWLTILAKPLYWLLDQLHKVIANWGWSIVALVVLLKIAFYWLNAKAYASMAKMKAINPR 407 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I E+RE+ K PQ +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+EMR Sbjct: 408 IQEMRERLK-DKPQQMQQEMMRIYREEKVNPMGGCLPIMIQIPVFIALYWVLLSSVEMRG 466 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 AP+ GWI DL++ DP I P++M+ S +Q ++P P D Sbjct: 467 APWIGWIHDLSSPDPFFIL-------------------PLLMTASSLLQTALNPAPPDPM 507 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP++F FPAGL++YW +N++SI QQ +I K G Sbjct: 508 QAKMMWLMPLMFSVMFFFFPAGLVLYWLTNNILSIAQQWIINKRMGV 554 >gi|254483195|ref|ZP_05096428.1| 60Kd inner membrane protein [marine gamma proteobacterium HTCC2148] gi|214036566|gb|EEB77240.1| 60Kd inner membrane protein [marine gamma proteobacterium HTCC2148] Length = 565 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 163/590 (27%), Positives = 274/590 (46%), Gaps = 63/590 (10%) Query: 1 MERNWNYFV-AIA-LSVIIVYAWQNFYVYPRIEEMNNER-----KNIQTVKQPNQVDNSY 53 M+ + + AIA LS +++ W F E + T + P + + Sbjct: 1 MDLQRSLLIGAIAVLSFMLLTEWVAFKDDKAAIETAQATRLIANTDSNTAELPQVSEPTL 60 Query: 54 AAVLIDDRAQA----LSMSPRVE---------LKNPSLIGSINLKGAQFDDLNLRGYHLD 100 A D + P++ ++ SL +I+L G +L L Y + Sbjct: 61 FATDDDVPSTPELIEAEAPPQITQKNSGRIILVRTDSLQLAIDLNGGDIIELALPRYLEE 120 Query: 101 VS-SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTP 155 + + P V L N Y A+ + + N ++ + T Sbjct: 121 IDNPDIPFVLL--EQNDSRTYIAQSGLIGS--NGIDSKGRALFTASADNFELSESDDTLV 176 Query: 156 IKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTAT 211 + L A+NI + + YL +I V NNS + + + G+I R P + Sbjct: 177 VDLNLTTADNIKVTKRFTFTRGEYLVEIDYIVVNNSNARWQANLFGQIKRDSTPAPSASQ 236 Query: 212 NTFGVQEGFIAVL--GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 + G+Q A + D + + D+ W+ + Y+ S +IP+ + Sbjct: 237 SGMGMQPFLGAAITQPDVRFTKFTFEDMLDDPFK-AQLPGGWIAMFQHYFLSAWIPNSDQ 295 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 S + + G A F++ +T+ PG+S TT +AG K+ + P Sbjct: 296 SHNYSTRVTQAGFNI--AGFTSPALTLDPGQSGTTGAQFYAGPKDQYRLAEIS-----PY 348 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 ++++D+GW ++IAKP+F L++ ++ VGN+G AI+L TV VK FF L+ Y S A M Sbjct: 349 LDLVVDYGWLWWIAKPLFWLLTNIHSFVGNWGTAIILLTVVVKAAFFKLSATSYRSMARM 408 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ ++RE++ Q +AM++LY+ +NP+ GC PIL+Q+PVF A+Y V+ Sbjct: 409 RKVQPQMLDIREQYADDK-QKQSQAMMELYRKEKVNPMGGCLPILVQMPVFIALYWVLME 467 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+E+RHAPF WIKD++ DP + PI+M SM+ +++P Sbjct: 468 SVELRHAPFALWIKDMSVMDPYFVL-------------------PILMGASMWFMQRLNP 508 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 PP D QA I+ W+P+VF F FPAGL++YW +N++S+ QQ VI K Sbjct: 509 PPTDPMQAKIMQWLPIVFTFFFLWFPAGLVLYWVVNNLLSMAQQYVITKQ 558 >gi|261400585|ref|ZP_05986710.1| membrane protein insertase, YidC/Oxa1 family [Neisseria lactamica ATCC 23970] gi|269209662|gb|EEZ76117.1| membrane protein insertase, YidC/Oxa1 family [Neisseria lactamica ATCC 23970] Length = 548 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 143/582 (24%), Positives = 239/582 (41%), Gaps = 57/582 (9%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL+++I W+ + P+ + Q + A Sbjct: 1 MDFKRLTAFFAIALAIMI--GWEKMFPAPQTAPAPGQAAQQQRQTVATASAEAALAPATP 58 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + ++ I+ K L L Y + P V L + Sbjct: 59 -----------ITVTTDAVQAVIDEKSGDLRRLTLLKYKATGDEHKPFV--LFGDGKEYT 105 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + ++L N + ++ + Y Sbjct: 106 YVAQSELLDAQGNNVLKGIGFTAPQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKGSY 165 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S RI+R + Q + + G + + + +SD Sbjct: 166 LVNVRFDIANTGGKPANLSADYRIVRDRSQPEGQGYFTRSYLGPVVYTPEGGFQKVSFSD 225 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHA 283 ++ + S WLG+ + ++ S +I P S + + D Sbjct: 226 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCAAGECGIDIKRRNDK 285 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y A I G T L+AG + I + ++ D+G ++ A Sbjct: 286 LYSASVGVPLAAIPAGAKAETAVNLYAGPQTTSVIAGIAD-----KLQLAKDYGKVHWFA 340 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 341 SPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKY 400 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 401 GDD-RMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 459 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ +DP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 460 DLSRSDPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 500 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 501 PLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 542 >gi|187925954|ref|YP_001897596.1| inner membrane protein translocase component YidC [Burkholderia phytofirmans PsJN] gi|254772762|sp|B2T7U1|OXAA_BURPP RecName: Full=Inner membrane protein oxaA gi|187717148|gb|ACD18372.1| 60 kDa inner membrane insertion protein [Burkholderia phytofirmans PsJN] Length = 552 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 150/579 (25%), Positives = 250/579 (43%), Gaps = 52/579 (8%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + + P + Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTVGSAAPGTTTPGTQPADL 60 Query: 59 DDRAQAL-------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP-IVTL 110 A + S V+ G I+ +G L+L P +V Sbjct: 61 PATNAAAPGNAPAATQSQLVKFNTDVYSGEIDTRGGTLSKLSLVN---KGDGKQPDLVIT 117 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVFKNA--NN 165 L + Y A + + PN N ++ + + + +L F++ Sbjct: 118 LFDRTANHTYLARTGLLGG----DFPNHNDIYTPLPNQQHDLTGDEKSFQLSFESPVKGG 173 Query: 166 ILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAV 223 + +T + Y+ + + N + S ++R T F G Sbjct: 174 VKVIKTYTFTRGSYVIGVDTKIQNVGTAPVTPSVYMELVRDDQPVETPRFSHTFIGPAVY 233 Query: 224 LGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + DI+K+ + N W+ + Y+AS +IP + + + Sbjct: 234 TDQHHFQKMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQGVKRDIYVEKIDP-- 291 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 A Y+ TI PG+++ + LFAG +E + P E++ D+GW I Sbjct: 292 ALYRVGVKEPVPTIAPGQTVDVSARLFAGPEEERMLEGI-----APGLELVKDYGWVTII 346 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+F L+ ++ VGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+ Sbjct: 347 AKPLFWLLEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRER 406 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI Sbjct: 407 FKGDP-QKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWI 465 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ DP I P++M++SMF+Q K++P P D QA ++ + Sbjct: 466 HDLSQQDPFFIL-------------------PVLMAVSMFLQTKLNPTPPDPVQAKMMMF 506 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 MP+ F FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 507 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|88798542|ref|ZP_01114126.1| putative inner membrane protein translocase component YidC [Reinekea sp. MED297] gi|88778642|gb|EAR09833.1| putative inner membrane protein translocase component YidC [Reinekea sp. MED297] Length = 559 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 149/580 (25%), Positives = 255/580 (43%), Gaps = 56/580 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMN--------NERKNIQTVKQPNQVD 50 M+ +A +S I++ W N Y N + + D Sbjct: 1 MDVRRIALIAGLAIVSYIMILQWSNDYSQTNPVNTADAVIAGDLNSDNAVASEVPTGNPD 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPIVT 109 + A + + ++ +L I+L G L Y + N P Sbjct: 61 VANDTQAGQAPATSQVNGDVISVRTDTLDVRISLDGGDVIYTALPEYPYSLETPNIPFR- 119 Query: 110 LLSPSNTKNAYFAELDYVSTAN-----NIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 + +NT Y A+ V + + L L + L + N Sbjct: 120 -MFENNTTRTYIAQSGLVGEDGIDRQSRARFSAEQSTYELGDADQL----EVVLTHEADN 174 Query: 165 NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT----FGVQEG 219 ++ + + + Y+ + +TN D +R + G++ R + Q + G Sbjct: 175 GLVVNKVYTFNRGAYVMDVRFDLTNQGSDTLRTNLFGQLRRDRSQDPSAGSGIGMRSYLG 234 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 D + + K+ +++ N + W+ + Y+ S +IPS + + S Sbjct: 235 ATFSTEDSAYEKVKFGELDDGRF-NGSKVGGWVAMLQHYFLSAWIPSANDNNAFYGQKGS 293 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G Y F A + + PG+S++T L+ G K+ + +L E +D+GW Sbjct: 294 TGD--YYVGFQAPTVVVGPGESVSTGAQLYVGPKDQDQLDELADNL-----EKTVDYGWL 346 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 ++IA+P+F LM + + L+GN+G +I+L T+ VK++ +PL Y S M+ P I EL Sbjct: 347 WWIAQPLFWLMQFIHGLIGNWGWSIVLMTLTVKMVLYPLTASSYRSMGKMRKFAPVISEL 406 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE++ Q + + M++LY+ +NPL GC P+L+Q+PVF A+Y V+ S+E+R +PF Sbjct: 407 REQYGDD-RQKMSQEMMKLYQKEKLNPLGGCLPMLVQMPVFIALYWVLMESVELRQSPFI 465 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAM 518 WI+DL+ DP + P++M SMF+QM+M P D Q Sbjct: 466 FWIQDLSLKDPFFVL-------------------PLLMGASMFLQMRMQQQPTMDPMQQK 506 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ +MPV+F F FPAGL +YW +NVI+IVQQ ++ K Sbjct: 507 IMQFMPVMFTFMFLWFPAGLTLYWFTNNVITIVQQYIVNK 546 >gi|320321684|gb|EFW77783.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. glycinea str. B076] Length = 563 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 140/582 (24%), Positives = 235/582 (40%), Gaps = 53/582 (9%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL---- 57 + +AL+++ W Y + N + +A Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASADVPS 63 Query: 58 ---------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A++ + +K L +I+ G L L Y Sbjct: 64 ASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVPF 123 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANN 165 L + + + A+ T V+ +V + N Sbjct: 124 QLFD-NGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKFSENG 182 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + + + Y + V N S + ++ R G Sbjct: 183 VNYIKRFTFKRDLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATYLGA 242 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI+K I W+ Y+ + +IP + Q + D Sbjct: 243 ALWTAAEPYKKVSMKDIDKGQIKE-TVQGGWVAWLQHYFVTAWIPDHNATNAVQTR--KD 299 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y F++ +++ PG T+ L+AG K + P E+ +D+G+ + Sbjct: 300 SQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDYGFLW 354 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 355 FIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLK 414 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ Sbjct: 415 EQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWIL 473 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 474 WITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKVM 514 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 515 KMMPIIFTFFFLWFPAGLVLYWVLNNTLSIAQQAYITRKIEA 556 >gi|320331114|gb|EFW87085.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. glycinea str. race 4] gi|330881912|gb|EGH16061.1| membrane protein insertase [Pseudomonas syringae pv. glycinea str. race 4] Length = 563 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 140/582 (24%), Positives = 235/582 (40%), Gaps = 53/582 (9%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL---- 57 + +AL+++ W Y + N + +A Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASADVPS 63 Query: 58 ---------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A++ + +K L +I+ G L L Y Sbjct: 64 ASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVPF 123 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANN 165 L + + + A+ T V+ +V + N Sbjct: 124 QLFD-NGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKFSENG 182 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + + + Y + V N S + ++ R G Sbjct: 183 VNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATYLGA 242 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI+K I W+ Y+ + +IP + Q + D Sbjct: 243 ALWTAAEPYKKVSMKDIDKGQIKE-TVQGGWVAWLQHYFVTAWIPDHNATNAVQTR--KD 299 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y F++ +++ PG T+ L+AG K + P E+ +D+G+ + Sbjct: 300 SQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDYGFLW 354 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 355 FIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLK 414 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ Sbjct: 415 EQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWIL 473 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 474 WITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKVM 514 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 515 KMMPIIFTFFFLWFPAGLVLYWVLNNTLSIAQQAYITRKIEA 556 >gi|332308616|ref|YP_004436467.1| membrane protein insertase, YidC/Oxa1 family domain containing [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175945|gb|AEE25199.1| membrane protein insertase, YidC/Oxa1 family domain containing [Glaciecola agarilytica 4H-3-7+YE-5] Length = 543 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 141/563 (25%), Positives = 257/563 (45%), Gaps = 37/563 (6%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME + F+ I L S ++ WQ Y ++ + +++ N Sbjct: 1 MESQRS-FLLIGLAMVSFLLWQQWQVDYGPQPVQPVESQQTTGSDAPSGNGDVPIATPNN 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + +L SIN G NL Y L+ S +LL PS Sbjct: 60 QNALPSQSVAGKVISVTTDTLQLSINTVGGDVISANLLKYPLEQGSEGTY-SLLRPSG-P 117 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 + A+ V T + S + T + L + + ++ + +++ Sbjct: 118 TIFVAQSGLVGTNGIDKTARPTYSVAQDSYIMQGDTLTVPLTYTAKSGLIVTKEFIFNKN 177 Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQEGFIAVLGDKSLVEQKYS 235 + K+ V N S D G++ + + F G D+ + + Sbjct: 178 SHDVKVNYHVENTSSDVKSVKQFGQLKQSTADQGGSMFMPTYRGGAFSTEDERYEKYSFD 237 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D++ ++ N W + + Y+ S ++P ++ + K +G+A + Sbjct: 238 DMQDKNL-NQTTPAGWAAMIEHYFVSAWVPPQDQTNSLYSKMTQNGNAI--IGVVGQSVD 294 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I PG+S+ + L+ G K+ T+ + L ++ +D+G+ ++I++P+F + + ++ Sbjct: 295 IEPGQSVDIQSSLYLGPKDQDTLKQIARGL-----DLTVDYGFLWWISQPLFTFLQFIHS 349 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 LVGN+G +I+L T+ VK +PL K QY S A M+ ++PK+D L+E++ Q +Q+AM Sbjct: 350 LVGNWGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDK-QKMQQAM 408 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++YK +NP+ GC+P+LLQ+P+F A+Y V+ S+E+RHA F WI DL+ DP + Sbjct: 409 MEMYKKDKVNPMGGCFPLLLQMPIFLALYWVLLESVELRHADFIFWITDLSVKDPYFVL- 467 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSF 534 PI+ LSM++ K+ P D Q I+ +MPV F Sbjct: 468 ------------------PILTGLSMYLLQKLQPMTMTDPMQQKIMQFMPVAMSLFFFIF 509 Query: 535 PAGLIIYWSWSNVISIVQQAVIM 557 PAGL++YW SN+I+++Q +I Sbjct: 510 PAGLVLYWLISNIITLIQAKIIY 532 >gi|296157622|ref|ZP_06840457.1| membrane protein insertase [Burkholderia sp. Ch1-1] gi|295892394|gb|EFG72177.1| membrane protein insertase [Burkholderia sp. Ch1-1] Length = 552 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 149/579 (25%), Positives = 250/579 (43%), Gaps = 52/579 (8%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + + P + Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTVGGAAPGTTTPGTQPADL 60 Query: 59 DDRAQAL-------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP-IVTL 110 A + S ++ G I+ +G L+L P +V Sbjct: 61 PATNAAAPGNAPAATQSQLIKFNTDVYSGEIDTRGGTLSKLSLVN---KGDGKQPDLVIT 117 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVFKNA--NN 165 L + Y A + + PN N ++ + + + +L F++ Sbjct: 118 LFDRTANHTYLARTGLLGG----DFPNHNDIYTPLPNQPHDLTGDEKSFQLSFESPVKGG 173 Query: 166 ILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAV 223 + +T + Y+ + + N + S ++R T F G Sbjct: 174 LKVIKTYTFTRGSYVIGVDTKIQNVGATPVSPSVYMELVRDDQPVETPRFSHTFIGPAVY 233 Query: 224 LGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + DI+K+ + N W+ + Y+AS +IP + + + Sbjct: 234 TDQHHFQKMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQGVKRDIYVEKIDP-- 291 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 A Y+ TI PG+++ + LFAG +E + P E++ D+GW I Sbjct: 292 ALYRVGVKEPVPTIAPGQTVDVSARLFAGPEEERMLEGI-----APGLELVKDYGWVTII 346 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+F L+ ++ VGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+ Sbjct: 347 AKPLFWLLEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRER 406 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI Sbjct: 407 FKGDP-QKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWI 465 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ DP I P++M++SMF+Q K++P P D QA ++ + Sbjct: 466 HDLSQQDPFFIL-------------------PVLMAVSMFLQTKLNPTPPDPVQAKMMMF 506 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 MP+ F FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 507 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|299068432|emb|CBJ39656.1| cytoplasmic insertase, essential for proper integration of ATPase into the membrane [Ralstonia solanacearum CMR15] Length = 553 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 138/506 (27%), Positives = 232/506 (45%), Gaps = 40/506 (7%) Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 S ++ + + +++ GA L L + +L + + Y Sbjct: 74 AVSQTPASEKIVVTTDVIRATVDTAGAVVTKLELL----TQKDHDGNPMVLFDHSLERTY 129 Query: 121 FAELDYVSTANNIELPNSNTVWNLISG-KILTPTTPIKLVFK-NANNILFERTISLDE-H 177 A + + PN TV+ +G + L + L + +T Sbjct: 130 LARSGLIGG----DFPNHTTVFTASAGPRDLGTGGEVSLTLTADKGGAKLAKTYVFKRGS 185 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSD 236 Y+ V N+ I + + R + + G + ++D Sbjct: 186 YVIDTRFDVANDGAAPINPTLYMELARDGGAVEQSRFYSTFTGPAVYTDGDKFHKITFAD 245 Query: 237 IEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 I+K ++ W+ + Y+AS +IP+ + Y+ T Sbjct: 246 IDKGKAQVPAPTDSGWVAMVQHYFASAWIPAANVKREYYVNRVDTN--FYRIGLQEPLGT 303 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG S++TT LFAG ++ + P +++ D+GW +AKP+F L+ + Sbjct: 304 VAPGASVSTTARLFAGPQQARMLEAIT-----PGLDLVKDYGWLTIVAKPLFWLLEKIHA 358 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 L+GN+G +I+ TV +KL+FFPL+ Y S A MK++QP++ +RE+ K P Q + + M Sbjct: 359 LLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGDP-QKMNQEM 417 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY+T +NPL GC PI++QIPVF A+Y + S+EMR AP+ GW+ DLA+ DP I Sbjct: 418 MTLYRTEKVNPLGGCLPIMIQIPVFMALYWALLSSVEMRGAPWLGWVHDLASPDPFYIL- 476 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 PI+M++SMF+Q +++P P D QA ++ +MP+ F FP Sbjct: 477 ------------------PILMAVSMFVQTRLNPTPPDPVQAKMMMFMPIAFSVMFFFFP 518 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHG 561 AGL++YW +N +SI QQ I +M G Sbjct: 519 AGLVLYWVVNNCLSIAQQWSINRMLG 544 >gi|73543142|ref|YP_297662.1| putative inner membrane protein translocase component YidC [Ralstonia eutropha JMP134] gi|123623711|sp|Q46VL6|OXAA_RALEJ RecName: Full=Inner membrane protein oxaA gi|72120555|gb|AAZ62818.1| protein translocase subunit yidC [Ralstonia eutropha JMP134] Length = 555 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 151/579 (26%), Positives = 243/579 (41%), Gaps = 57/579 (9%) Query: 5 WNYFVAIALSVIIVYAWQNFY-------VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 + + S+ +V + N+ ++ V + A Sbjct: 4 KRTILWVIFSMSLVLLYDNWQRANGHASMFFPSATQQQAASAPAASAAQGDVPKANATAG 63 Query: 58 IDDRAQALS--------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 A ++ + + I+ G L L H + V Sbjct: 64 AAAPAAPGGAPQAAAQPTGEKIIVTTDEVRAEIDTAGGILSRLELLNEHE---KDGKPVV 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT---TPIKLVFKNANNI 166 L +T Y A + +LPN TV+ G + L N + Sbjct: 121 LF-ERDTTRTYMARSGLIGG----DLPNHTTVFTATPGPRTLDGADKLEVTLTAD-KNGV 174 Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVL 224 F +T + Y+ VTN+ + + + R + + + G Sbjct: 175 KFVKTYVFHKGSYVVDARFAVTNDGTAPVSPTLYMELARDGSKVEQSQFYSTFTGPAIYT 234 Query: 225 GDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + + DI K S ++ W+ + Y+AS +IP + + Sbjct: 235 DADKYHKITFDDIAKGKASTPAATTSGWVAMVQHYFASAWIPQAGKEHSFYVQQIDPN-- 292 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ I PG ++TT LFAG +E + P E++ D+GW +A Sbjct: 293 LYRVGIQQPLGQIAPGATVTTDARLFAGPQEERMLEKIT-----PGLELVKDYGWLTILA 347 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ + + N+G +I+ TV +KL+FFPL+ Y S MK++QP++ +RE+ Sbjct: 348 KPLFWLLEKLHGFLNNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIRERH 407 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K P Q + M+ LYKT +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ GWI Sbjct: 408 KGDP-QKMNAEMMALYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIH 466 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I PI+M++SMF+Q +++P P D QA ++ M Sbjct: 467 DLSVPDPFYIL-------------------PIVMAVSMFVQTRLNPTPPDPVQAKVMMIM 507 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P+VF F FPAGL++YW +N++SI QQ I +M G Sbjct: 508 PLVFSFMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGK 546 >gi|254447604|ref|ZP_05061070.1| inner membrane protein, 60 kDa [gamma proteobacterium HTCC5015] gi|198262947|gb|EDY87226.1| inner membrane protein, 60 kDa [gamma proteobacterium HTCC5015] Length = 553 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 149/580 (25%), Positives = 271/580 (46%), Gaps = 48/580 (8%) Query: 1 MERNWNYFVAIALSVI---IVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ N F+ I+L+++ I WQ+ Y + E + Q + Sbjct: 1 MD-NLRIFLLISLALVGAMIYGQWQDDYADQKAAVTQTESASSSVTTPNPQAAKDLPSRP 59 Query: 58 I--------DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + D A+ + + +K L +IN +G + L Y ++ + +V Sbjct: 60 VSENSSTTADTAAETQVENQSIRVKTDVLDIAINTRGGNVVESQLLQYSTELGEET-LVK 118 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI---LTPTTPIKLVFKNANNI 166 L S S + + + + A + P+ + V+ + T + LV++ + + Sbjct: 119 LQS-SQPQRFFSVQSGLLGNAG-VPAPDHHAVYRSEKTEYQLGAKDTVTVPLVWEQ-DGL 175 Query: 167 LFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVL 224 + + YLF + + N + ++ R + +++ F G + Sbjct: 176 RVTKRYTFYKGSYLFDLSFEIDNQTPQNWSGHQYRQLQRAEFDDSSSPFLVTYTGGVIYN 235 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA- 283 + + Y ++E+S +S + W + Y+ + +P KET+ H + +S Sbjct: 236 QEDRYQKLDYDELEESPLSQSFDH-GWAAMIQHYFLTALVPPKETANHYYSRGVSKAEGK 294 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 RY ++ EI + G+S + T +F G K + ++ +D+G+ ++ Sbjct: 295 RYILGMTSPEIAVPAGESASRTTQVFVGPKLQDRLEEV-----AEGLDLTVDYGFLTVLS 349 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+S+ + +GN+G +I++ T +KLLFFPL++ Y S A M+ + PK+ ++RE++ Sbjct: 350 KPLFHLLSWLHGFIGNWGWSIIVLTAIIKLLFFPLSQASYRSMAKMRQVTPKLQQIRERY 409 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q L + M++LYKT INP+ C P+L+QIPVF A+Y + S+E+R APF WI Sbjct: 410 SDD-RQRLSQEMMKLYKTEKINPVGSCLPMLIQIPVFIALYWALLESVELRQAPFILWIN 468 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP + P+IM L+M++Q K++P P D QA + M Sbjct: 469 DLSTKDPFYVL-------------------PLIMGLTMYLQQKLNPTPPDPMQAKVFMMM 509 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 PVVF + FP+GL++YW +N +SI+QQ I + AE Sbjct: 510 PVVFTAFFAFFPSGLVLYWVTNNTLSIIQQWWITRQLEAE 549 >gi|330890254|gb|EGH22915.1| membrane protein insertase [Pseudomonas syringae pv. mori str. 301020] Length = 563 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 138/582 (23%), Positives = 234/582 (40%), Gaps = 53/582 (9%) Query: 5 WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL---- 57 + +AL+++ W Y + N + +A Sbjct: 4 KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASADVPS 63 Query: 58 ---------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A++ + +K L +I+ G L L Y Sbjct: 64 ASATANTAAAPLETLAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVPF 123 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANN 165 L + + + A+ T V+ +V + N Sbjct: 124 QLFD-NGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKFSENG 182 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + + + Y + V N S + ++ R G Sbjct: 183 VNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATYLGA 242 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI+K + W+ Y+ + +IP + Q + D Sbjct: 243 ALWTAAEPYKKVSMKDIDKGQVKE-TVQGGWVAWLQHYFVTAWIPDHNATNAVQTR--KD 299 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y F++ +++ P T+ L+AG K + P E+ +D+G+ + Sbjct: 300 SQGNYIIGFTSPTLSVAPAAQGETSATLYAGPKSQAVLKELS-----PGLELTVDYGFLW 354 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 355 FIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLALLK 414 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP+ Sbjct: 415 EQHGDD-RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWIL 473 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 474 WITDLSIKDPFFIL-------------------PIIMGATMFIQQRLNPTPPDPMQAKVM 514 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 515 KMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|323527919|ref|YP_004230072.1| membrane protein insertase, YidC/Oxa1 family domain containing [Burkholderia sp. CCGE1001] gi|323384921|gb|ADX57012.1| membrane protein insertase, YidC/Oxa1 family domain containing [Burkholderia sp. CCGE1001] Length = 552 Score = 438 bits (1127), Expect = e-120, Method: Composition-based stats. Identities = 151/578 (26%), Positives = 247/578 (42%), Gaps = 50/578 (8%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV-- 56 M+ I ++ WQ + P + + P Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTAGSAAPGTTTPGTQPADL 60 Query: 57 -----LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + S V+ G I+ +G L+L +V L Sbjct: 61 PATNAAAPANTPAAAQSQLVKFSTDVYSGEIDTRGGTLSKLSLVK--QGDGKQPDLVITL 118 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNL---ISGKILTPTTPIKLVFKNA--NNI 166 + Y A + + PN N V+ L ++ L F++ + Sbjct: 119 FDRTGNHTYLARTGLLGG----DFPNHNDVYTLMPNQQTELKGDQKSFSLSFESPVKGGV 174 Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVL 224 +T + Y+ + + N + S ++R T F G Sbjct: 175 KVIKTYTFTRGSYVIGVDTKIQNVGTAPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYT 234 Query: 225 GDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + + DI+K+ ++ N W+ + Y+AS +IP + + + A Sbjct: 235 DQHHFQKMTFGDIDKNKEDYAKQADNGWIAMVQHYFASAWIPQQGVKRDIYVEKIDP--A 292 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ I PG+++ + LFAG +E + P E++ D+GW IA Sbjct: 293 LYRVGVKEPVAAIAPGQTVDVSARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIA 347 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ ++ VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+F Sbjct: 348 KPLFWLLEKIHSYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERF 407 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI Sbjct: 408 KGDP-QKMNAALMELYKTEKVNPFGGCLPVVVQIPVFISLYWVLLSSVEMRGAPWILWIH 466 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I P++M++SMF+Q K++P P D QA ++ +M Sbjct: 467 DLSQQDPYFIL-------------------PVLMAVSMFLQTKLNPTPPDPVQAKMMMFM 507 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P+ F FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 508 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|167560996|ref|ZP_02353912.1| putative inner membrane protein translocase component YidC [Burkholderia oklahomensis EO147] Length = 483 Score = 438 bits (1127), Expect = e-120, Method: Composition-based stats. Identities = 145/509 (28%), Positives = 235/509 (46%), Gaps = 44/509 (8%) Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP--IVTLLSPSNTKNA 119 + + V G I+ +G L L+ + P VTL + + Sbjct: 1 TAPAAQAQLVRFSTDVYDGEIDTRGGTLAKLTLKK---EGDGKQPDLFVTLFDHAE-NHT 56 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNA--NNILFERTISLD 175 Y A + + PN N V+ ++G +KL F++ + +T + Sbjct: 57 YLARTGLLGG----DFPNHNDVYAQVAGPTSLSGDQNTLKLSFESPVKGGVKVVKTYTFT 112 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQK 233 Y+ + + N + + ++R T F G K + Sbjct: 113 RGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTPVETPLFSHTFLGPAVYTDQKHFQKIN 172 Query: 234 YSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 +SD++K+ + N W+ + Y+AS +IP + + + Y+ Sbjct: 173 FSDVDKNKADYVASADNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDP--TLYRVGVKQP 230 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 I PG+S + LFAG +E + P E++ D+GW IAKP+F L+ Sbjct: 231 VAAIAPGQSADVSARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEK 285 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK P Q + Sbjct: 286 IHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDP-QKMN 344 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 345 AALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYF 404 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I P++M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 405 IL-------------------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFF 445 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++Y+ +NV+SI QQ I + G Sbjct: 446 FFPAGLVLYYVVNNVLSIAQQYYITRTLG 474 >gi|160901487|ref|YP_001567069.1| 60 kDa inner membrane insertion protein [Delftia acidovorans SPH-1] gi|160367071|gb|ABX38684.1| 60 kDa inner membrane insertion protein [Delftia acidovorans SPH-1] Length = 570 Score = 438 bits (1126), Expect = e-120, Method: Composition-based stats. Identities = 140/587 (23%), Positives = 247/587 (42%), Gaps = 58/587 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM------NNERKNIQTVKQPNQVDNSYA 54 M + + +V W + V+ + +T K P A Sbjct: 1 MNDIRRTILWVIFGFSLVLLWDKWQVHSGKKATFFPAPAVATAPAPETGKAPGDASVPSA 60 Query: 55 AVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A A + V + L + + +G L Y V + Sbjct: 61 AAAATAGAGEVPGGAAAAPEAAPRQNVTISTDVLRLTFDSQGGTLRHAELLKYADSVHKD 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVFKN 162 P+V L + Y + + P T + G ++ ++L F++ Sbjct: 121 KPVV--LFDESVHRVYLGQSGLIGGG----FPTHKTTMTALPGARELKDGEDQMELRFES 174 Query: 163 AN--NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA---TNTFGV 216 + + + +L Y + V N + +++R + + + Sbjct: 175 PDMGGVKLVKIWTLKRGAYDIGVRHEVVNTGTAAVSPQLYLQLVRDGNKPEGEQSTMYST 234 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G +K + ++ DIE S S ++ + Y+AS ++ ++ + Sbjct: 235 FTGPAVYTDEKKYQKVEFKDIESGKASVEKSSSGGYVAMVQHYFASAWLLAEGIQRDNFL 294 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + + + Y TI PG+S + LFAG + + P E++ D Sbjct: 295 RKVDNN--LYAVGMITPVGTIEPGQSKSVEARLFAGPQIEKRLESL-----APGLELVKD 347 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW +AKP++ L+ + +GN+G +I+ + +K+ F+ L K Y S A MK I P+ Sbjct: 348 YGWLTILAKPLYWLLDKLHGFLGNWGWSIVALVLLLKIAFYWLNAKAYSSMAKMKAINPR 407 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I E+RE+ K PQ +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+E+R+ Sbjct: 408 IMEMRERLK-DKPQQMQQEMMRIYREEKVNPMGGCLPIIIQIPVFIALYWVLLSSVEIRN 466 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 AP+ GWI DL+A DP I P++M+LS +Q ++P P D Sbjct: 467 APWIGWITDLSAKDPLFIL-------------------PVLMTLSSLLQTALNPAPPDPM 507 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP+VF FPAGL++YW +N++SI QQ +I G Sbjct: 508 QAKMMWIMPLVFSVMFFFFPAGLVLYWLTNNILSIAQQWIINTRMGV 554 >gi|312797629|ref|YP_004030551.1| 60 kDa inner membrane protein YIDC [Burkholderia rhizoxinica HKI 454] gi|312169404|emb|CBW76407.1| 60 kDa inner membrane protein YIDC [Burkholderia rhizoxinica HKI 454] Length = 554 Score = 438 bits (1126), Expect = e-120, Method: Composition-based stats. Identities = 157/588 (26%), Positives = 255/588 (43%), Gaps = 58/588 (9%) Query: 1 MERNWNYFVAIALSVIIVY--AWQNFY-----VYPRIEEMNNERKNI--------QTVKQ 45 M+ I +++ WQ + +P Q Sbjct: 1 MDIKRTVLWVIFFMSVVMLYDNWQRDHGRLSLFFPNTTPTQTAASATPGTTTPGTQLADL 60 Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 P ++S A Q + ++ K G I+ G L+L + Sbjct: 61 PQTTESSSAPGTAPAM-QPVVKGQQIHFKTDVYDGDISTVGGTLSRLSLVK---EGDGKQ 116 Query: 106 PIVTL-LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI-LTP---TTPIKLVF 160 P + + L + Y A + + PN N V+ ++ G LT T I L Sbjct: 117 PNLYITLFDQTANHTYLARTGLIGG----DFPNHNDVFTVVPGPTSLTDGANTVSISLES 172 Query: 161 KNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQE 218 + +T + Y+ + + N ++ + ++R T F Sbjct: 173 PVKAGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVKPTVYMELVRDDTPVETPRFSHTFI 232 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKY 277 G + +SD++K + N W+ + Y+AS +IP + QF Sbjct: 233 GPAVYTEQHKFQKMSFSDLDKGKQDYAPSADNGWVAMVQHYFASAWIPKEGAQR--QFYA 290 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 A Y+ +I PG+S+ LFAG +E + P E++ D+G Sbjct: 291 DKFSQALYRVGMKEPVQSIAPGQSVNVAARLFAGPQEERKLEKI-----APGLELVKDYG 345 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W IAKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ Sbjct: 346 WVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQ 405 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ++RE+FK P Q + A+++LYK+ +NP GC PI++QIPVF ++Y V+ S+EMR AP Sbjct: 406 QIRERFKSDP-QKMNAALMELYKSEKVNPFGGCLPIVIQIPVFISLYWVLLSSVEMRGAP 464 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DL+ DP I P++M++SMF+Q K++P P D QA Sbjct: 465 WVLWIHDLSQQDPYFIL-------------------PVLMAVSMFVQTKLNPTPPDPVQA 505 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 ++ +MP+ F FPAGL++Y+ +NV+SI QQ I +M G + Sbjct: 506 KMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGKDKK 553 >gi|294648708|ref|ZP_06726168.1| Oxa1 family cytochrome oxidase biogenesis protein [Acinetobacter haemolyticus ATCC 19194] gi|292825383|gb|EFF84126.1| Oxa1 family cytochrome oxidase biogenesis protein [Acinetobacter haemolyticus ATCC 19194] Length = 586 Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 150/613 (24%), Positives = 265/613 (43%), Gaps = 73/613 (11%) Query: 3 RNWNYFVAIALSV----IIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPN 47 + W F + +++ AWQ Y + +++ + N Q + Sbjct: 2 QQWARFAILGAMFVTAYLLILAWQKDYGHAAPAPQQQAAVVSAHDVSADLPNAQNATAAS 61 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + + + ++ IN KG + L + + + P Sbjct: 62 DLPQANVTASQQATETTSVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDQSKNGDQPF 121 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNS-------NTVWNLISGKILTPT------- 153 V L + +N Y A+ + N T + + K + T Sbjct: 122 VMLENDAN--RTYVAQSGLIGLNGPDSSRNGRPMYDVEKTAYTMEDAKKMATTDGASSQV 179 Query: 154 TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH------K 206 + LVFK + +T + + Y + V N S + G++ R K Sbjct: 180 LTVPLVFKTPEGVEVIKTFTFTQGEYPITVKHQVVNRSQQNWQGQMFGQLKRDNSDDPGK 239 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP- 265 T G G D + K+S+ + N N+W+ + Y+ S +IP Sbjct: 240 SDQGIFTLGTFLGGAWGTPDAHYNKLKFSNFSDEKL-NLDAKNAWVAMVQHYFVSAWIPG 298 Query: 266 ------SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 + + ++ + F++ I + G S+ ++G K I Sbjct: 299 NLKLTQADGQPYTAKLESRQSADKMNIIGFTSPTINVPAGTSMEVDAKFYSGPK----IQ 354 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 KDLA+ +D+GW + IAK +F+ + +F+N+VGN+G +I+L T+ VKL+ +PL+ Sbjct: 355 SELKDLAV-GLNQTVDYGWLWPIAKLLFLGLQFFHNIVGNWGWSIILLTILVKLILWPLS 413 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K Y S A M+ I P++ ++E+F + Q M+ LYK +NPL+GC P+LLQ+P+ Sbjct: 414 SKSYRSMAKMRVIAPEMQRMKEEFGDDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPI 472 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F A+Y V+ S+E+RHAP+ WI+DL+A DP I P++M + Sbjct: 473 FLALYWVLMESVELRHAPWLLWIQDLSAMDPWFIL-------------------PLLMGV 513 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +M++Q ++P P D QA + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 514 TMYVQQMLNPQPTDPMQAKVFRLMPIIFTVFMLFFPAGLVLYWIVNNAITILQQSFINK- 572 Query: 560 HGAEIGLIDRLRS 572 E ++++ S Sbjct: 573 -SVEKDRLNKIES 584 >gi|307731536|ref|YP_003908760.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Burkholderia sp. CCGE1003] gi|307586071|gb|ADN59469.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Burkholderia sp. CCGE1003] Length = 552 Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 152/579 (26%), Positives = 249/579 (43%), Gaps = 52/579 (8%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV-- 56 M+ I ++ WQ + P + + P Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTAGSAAPGTTTPGTQPADL 60 Query: 57 -----LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP-IVTL 110 A + S V+ G I+ +G L+L + P +V Sbjct: 61 PATNAAAPANTPAATQSQLVKFSTDVYSGEIDTRGGTLSKLSLVK---EGDGKQPDLVIT 117 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPIKLVFKNA--NN 165 L + Y A + + PN N V+ L+ + L F++ Sbjct: 118 LFDRTGNHTYLARTGLLGG----DFPNHNDVYTLMPNQQTDLKGDQKSFSLSFESPVKGG 173 Query: 166 ILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAV 223 + +T + Y+ + + N + S ++R T F G Sbjct: 174 LKVIKTYTFTRGSYVIGVDTKIQNVGTTPVSPSVYMELVRDDQPVETPRFSHTFIGPAVY 233 Query: 224 LGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + DI+K+ ++ N W+ + Y+AS +IP + + + Sbjct: 234 TDQHHFQKMTFGDIDKNKEDYAKQADNGWIAMVQHYFASAWIPQQGVKRDIYVEKIDP-- 291 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 A Y+ I PG+++ + LFAG +E + P E++ D+GW I Sbjct: 292 ALYRVGVKQPVAAIAPGQTVDVSARLFAGPEEERMLEGI-----APGLELVKDYGWVTII 346 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+F L+ ++ VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+ Sbjct: 347 AKPLFWLLEKIHSYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRER 406 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI Sbjct: 407 FKGDP-QKMNAALMELYKTEKVNPFGGCLPVVVQIPVFISLYWVLLSSVEMRGAPWILWI 465 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ DP I P++M++SMF+Q K++P P D QA ++ + Sbjct: 466 HDLSQQDPYFIL-------------------PVLMAVSMFLQTKLNPTPPDPVQAKMMMF 506 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 MP+ F FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 507 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|91785811|ref|YP_561017.1| putative inner membrane protein translocase component YidC [Burkholderia xenovorans LB400] gi|123167872|sp|Q13SH4|OXAA_BURXL RecName: Full=Inner membrane protein oxaA gi|91689765|gb|ABE32965.1| protein translocase subunit yidC [Burkholderia xenovorans LB400] Length = 552 Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 147/578 (25%), Positives = 249/578 (43%), Gaps = 50/578 (8%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + + P + Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTRTVGSAAPGTTTPGTQPADL 60 Query: 59 DDRAQAL-------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + S ++ G I+ +G L+L +V L Sbjct: 61 PATNAAAPGNAPAATQSQLIKFNTDVYSGEIDTRGGTLSKLSLVK--QGDGKQPDLVITL 118 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVFKNA--NNI 166 + Y A + + PN N ++ + + + ++ F++ + Sbjct: 119 FDRTANHTYLARTGLLGG----DFPNHNDIYTPLPNQPHDLTGDEKSFQISFESPVKGGV 174 Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVL 224 +T + Y+ + + N + S ++R T F G Sbjct: 175 KVIKTYTFTRGSYVIGVDTKIQNVGTTPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYT 234 Query: 225 GDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + + DI+K+ + N W+ + Y+AS +IP + + + A Sbjct: 235 DQHHFQKMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDP--A 292 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ TI PG+++ + LFAG +E + P E++ D+GW IA Sbjct: 293 LYRVGVKEPVPTIAPGQTVDVSARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIA 347 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ ++ VGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+F Sbjct: 348 KPLFWLLEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERF 407 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI Sbjct: 408 KGDP-QKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIH 466 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I P++M++SMF+Q K++P P D QA ++ +M Sbjct: 467 DLSQQDPFFIL-------------------PVLMAVSMFLQTKLNPTPPDPVQAKMMMFM 507 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P+ F FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 508 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|77361918|ref|YP_341493.1| preprotein translocase; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase [Pseudoalteromonas haloplanktis TAC125] gi|123589158|sp|Q3IK55|OXAA_PSEHT RecName: Full=Inner membrane protein oxaA gi|76876829|emb|CAI88051.1| preprotein translocase ; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase [Pseudoalteromonas haloplanktis TAC125] Length = 544 Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 134/566 (23%), Positives = 246/566 (43%), Gaps = 35/566 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +R + + + +S ++ W Y P+ + + T + + + + Sbjct: 4 QRTFLFIGLMLVSFLLFQEWNTDYNTPKADPSATTQTLNPTSSESEDYVPTSSDSALPAS 63 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A L+ +E+ I+ +G + L Y S +P + L + YF Sbjct: 64 AT-LAKRSVIEITTDVFKVKIDTRGGDIVETYLLQYEETKGSETPYMLLGEFDGKQ--YF 120 Query: 122 AELDYVSTANNIELPNSNTVWNLI--SGKILTPTTPIKLVFKNANNILFERTISLDEH-Y 178 ++ + +++ S + + L F ++N + F +T + Y Sbjct: 121 SQSGLIGLNGPDASAQGRPTYHVEQKSYTLTGDELRVPLQFTDSNGVNFTKTYVFKKGQY 180 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 + T+ N + ++ ++ R + G D + +SD+ Sbjct: 181 DVALEYTINNTTSTPLQVQLYTQVKRTVQDKGSMVDQNYLGAAYGTDDDPYEKYSFSDMA 240 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 +++ ++ Y+ S ++P ++ S L + I Sbjct: 241 DKNLNKI-TLGGYVAFIQHYFVSAWVPMQDQSNT--LYSLITKSNAAIIGVKDEAVNIQA 297 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G T T + G KE + P ++ +D+GW +FI++P+F+L+ + ++++G Sbjct: 298 GSEQTLTATYYMGPKESDVLEAIH-----PDLDLTVDYGWLWFISQPLFVLLKWLHSILG 352 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+ T+ VK L +PL K QY S A M+ +QPK+ L+EKF Q +A +++ Sbjct: 353 NWGVAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMAALKEKFGDD-RQKFGQATMEM 411 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP+ GC+PILLQ+P+F A++ V S E+RHA F W+ DL+A DP + Sbjct: 412 YKKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFIFWLTDLSAKDPYYVL---- 467 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 PI+ SMFI K+ P D Q ++ +MPV+F FP+G Sbjct: 468 ---------------PILFGASMFITQKLQPMTVTDPMQQKMMTFMPVIFSVFFLWFPSG 512 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563 L++YW SN+ISIVQ +I + + Sbjct: 513 LVLYWLVSNLISIVQMLIIYRGMEKK 538 >gi|332976008|gb|EGK12879.1| YidC/Oxa1 family membrane protein insertase [Psychrobacter sp. 1501(2011)] Length = 572 Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 135/595 (22%), Positives = 245/595 (41%), Gaps = 65/595 (10%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + ++V AWQ Y + ++ T + S Sbjct: 1 MQKILRVLIIIAMLITAYLLVLAWQKDYANVPATSADAVTPSVSTSTTGADIPTSTGTGT 60 Query: 58 IDDRAQALS------------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 D A S + + I+ G LR Y+ Sbjct: 61 SDIPAATASATTDVPSSEVGGENTNAKQGALINVTTDRYQIKIDPVGGDVVYAALRNYNA 120 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTP 155 + S +P V L ++ + Y A+ + N I+ P ++ S + Sbjct: 121 TLDSKNPFVLL--ENSGQRVYVAQSGLIGP-NGIDTPAGRAKYSYQSDNYVMQPGQKKLE 177 Query: 156 IKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----- 209 + L +K + + +T + E Y + + N S ++ R + Sbjct: 178 VPLTYKQEDGVTITKTFTFTEGKYPISVNYNINNTSGKAWNGQLFAQLKRDSSKDPGMAD 237 Query: 210 -ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 + G D + K+ D + + W+GI Y+ S + P Sbjct: 238 KGAISMATYLGGAWGTPDDDYNKLKFKDFNDGDLKAASDK-GWVGIVQHYFVSAWTP--- 293 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 +F QF + ++ + + K T L+AG K+ ++ P Sbjct: 294 QNFTGQFFSREKAGDHF-IGMNSEQFMVPAAKQKDITATLYAGPKDQDSLLEV-----AP 347 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 +D+G+ + I+K +F ++ + ++GN+G +I+ T+ VKL + K Y S A Sbjct: 348 GLNKTVDYGFLWPISKVLFAVLEGIHKVIGNWGWSIIALTLLVKLALMWFSNKSYYSMAK 407 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ I P++ L+E+ + + M+ +YK +NP+AGC PILLQ+P+F A+Y V+ Sbjct: 408 MRAIAPRLQALKEEHGDD-RMKMSQEMMAIYKEEQVNPMAGCLPILLQMPIFLALYWVLV 466 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S+E+RHAP+ WI+DL++ DP I P++M SMF Q S Sbjct: 467 ESIELRHAPWILWIQDLSSMDPWFIL-------------------PMLMGASMFAQQMFS 507 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P P D QA ++ ++P++F + FPAGL++YW+ +N+ ++ QQ ++ K E Sbjct: 508 PQPTDPMQAKVMRFLPIIFTLFMLFFPAGLVLYWTVNNLFTMAQQYIVNKKVERE 562 >gi|261380787|ref|ZP_05985360.1| membrane protein insertase, YidC/Oxa1 family [Neisseria subflava NJ9703] gi|284796252|gb|EFC51599.1| membrane protein insertase, YidC/Oxa1 family [Neisseria subflava NJ9703] Length = 548 Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 140/577 (24%), Positives = 237/577 (41%), Gaps = 54/577 (9%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 A+SV I W++F+ P+ + A Sbjct: 4 KRLMAFFAISVAIFAGWEHFFPSPKPNPAQQAAQQQTAATPAKVA-----------AEAA 52 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 L+ + + + ++ I+ K L L Y + P V L + Y A+ Sbjct: 53 LTPASPITVTTDTVKAVIDEKSGDLRQLTLLQYKATGDEHKPFV--LFNDGKEYIYVAQS 110 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIV 183 + + N L + + ++L N + ++ + YL + Sbjct: 111 ELLDAQGNNVLKGISFTAPQKQYSLKGDKVEVRLSAPETNGLKIDKVYTFTKGSYLVNVR 170 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDIEKSS 241 +TN+ + S RI+R + + G + + + +SD++ + Sbjct: 171 FDITNSKGQPVNLSADYRIVRDHSEPEGQGYFTRSYVGPVVYTPEGGFQKVSFSDLDDDA 230 Query: 242 ISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHARYQAK 288 S WLG+ + ++ S +I P S S + D Y A Sbjct: 231 KSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKDGQSVCSAGECNIDIKRRNDNLYSAS 290 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 S I G T L+AG + I + + ++ D+G ++ A P+F Sbjct: 291 VSVPLAAIQAGAKAETAINLYAGPQTTSVIANIAD-----KLQLAKDYGKVHWFASPLFW 345 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 346 LLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDD-R 404 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI DL+ Sbjct: 405 MAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRP 464 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P IM+ +MF Q ++PP D QA ++ MP++F Sbjct: 465 DPFYIL-------------------PFIMAATMFAQTYLNPPSTDPMQAKMMKVMPLIFS 505 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 FPAGL++YW +N+++I QQ I + + Sbjct: 506 IMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 542 >gi|332525676|ref|ZP_08401825.1| yidc translocase/secretase [Rubrivivax benzoatilyticus JA2] gi|332109235|gb|EGJ10158.1| yidc translocase/secretase [Rubrivivax benzoatilyticus JA2] Length = 552 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 139/581 (23%), Positives = 236/581 (40%), Gaps = 49/581 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF-----------YVYPRIEEMNNERKNIQTVKQPNQV 49 M + + + W + + + + P Sbjct: 1 MTDIRRTILWVVFVTSLFLLWDAWNKHNGQPSLFGGPARPAATAASAPGSAASAGVPTAS 60 Query: 50 DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 A + A A + +V + + + + G Q L L Y + +V Sbjct: 61 AVQTPAGAVPQPA-APAGGEQVVVTTDLVKATFDSIGGQLVRLELLNYRDANHPDQNVVL 119 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIKLVFKNA--NN 165 L Y A+ ++ + LP T + G + + L F+ A + Sbjct: 120 L--DRVAAREYVAQTGLITGQAGVALPTHLTPMTVAPGARTLADGQDSLTLRFETAPLDG 177 Query: 166 ILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIA 222 +T + Y + N + ++ R P+ ++ + G Sbjct: 178 RRLVKTYTFKRGDYAVGVRHEFVNEGSTPVTPQLYLQLARDGNAPEGESHFYSTFTGPAM 237 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 + + DI K+ + +N W+ + Y+AS +I + E F+ G Sbjct: 238 FTSTSKYKKIDFKDIAKNDAGHDKTANDGWIAMVQHYFASAWIVNAEGQRE--FRTAKIG 295 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 Y + PG S + LF G + ++ P E L D+GW Sbjct: 296 DNLYTIAMVLPMGEVAPGASKALESQLFVGPQLETSLAAL-----APGLEYLKDYGWLMP 350 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 ++KP+F L+ + +GN+G AI+ V +K+ F+ L Y S A M+ I P++ E+RE Sbjct: 351 LSKPLFWLLDKLNSAIGNWGWAIVALVVLLKIAFYWLNASAYKSMAKMRAINPRVMEMRE 410 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 ++K PQ +Q+ M+++Y+ +NPL GC PIL+Q+P F A+Y V+ S+EMR+AP+ GW Sbjct: 411 RYK-DKPQQMQQEMMRIYREEKVNPLGGCLPILIQMPFFIALYWVLLSSVEMRNAPWIGW 469 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I DL+A DP I PI+M+ S +Q+ + P D QA ++ Sbjct: 470 ITDLSAKDPWFIL-------------------PILMTASSLVQVALGAKPPDPMQARLMW 510 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +MP+ F FPAGL++YW +NV+SI QQ I K G Sbjct: 511 FMPLAFGVMFFFFPAGLVLYWLTNNVLSIAQQWYINKKLGV 551 >gi|149375641|ref|ZP_01893410.1| Preprotein translocase subunit YidC [Marinobacter algicola DG893] gi|149360043|gb|EDM48498.1| Preprotein translocase subunit YidC [Marinobacter algicola DG893] Length = 570 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 150/603 (24%), Positives = 260/603 (43%), Gaps = 75/603 (12%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN------- 51 M+ A +S ++V AW Y P+ + T QP D+ Sbjct: 1 MDIQRIVLFAGLAIVSYMMVLAWNEDYHQPQ---TQPATEQASTTTQPASTDDMTLPGES 57 Query: 52 ----------------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 + + + + + ++ I+ G + +L Sbjct: 58 ATGPDTSSEEFTTPEGDGQTLSASETSSVSASDQLITVRTDVYELKIDRVGGNLIESSLL 117 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS--------TANNIELPNSNTVWNLISG 147 + + S + L + +K Y E + N S + + L G Sbjct: 118 QHDRSLDSEESLRLLTN--TSKRTYIMESGLIGRDGIDSKRNGNAPVYNASASEYELQEG 175 Query: 148 KILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK 206 + T + L F NN+ + + Y + + N S + + G+I+R + Sbjct: 176 E---NTLTVDLTFTTDNNVEVTKQYLFSRDSYEIDVRYQINNQSDSVWQANMTGKIVRDQ 232 Query: 207 --PQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASV 262 TA N+ G++ G + + + + D+ ++ I N +N WL Y+ + Sbjct: 233 APDPTAQNSLGIRAFLGMVVSSPEDPYEKFDFDDLSENPI-NQSVTNGWLAFLQHYFLAA 291 Query: 263 FIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 ++P ++ Q Y F + PG++ + + G K + + Sbjct: 292 WVPERDQPAQFQSTRRGP---LYVMGFVYPATVVEPGQTSEVSAKAYVGPKIIERLENV- 347 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 P + +D+G+ +FIA P+F+++ +F+ LVGN+G+AI+L TV VK +FF L+ Sbjct: 348 ----APNLDRTVDFGFLFFIALPLFIILDWFHGLVGNWGVAIILLTVLVKAVFFKLSATS 403 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y S A M+ + P++ L+E + Q + + M+ LYK INPL GC PIL+Q+PVF + Sbjct: 404 YRSMARMRAVAPQLTRLKELYGDD-RQRMSQEMMALYKREKINPLGGCLPILVQMPVFIS 462 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y V+ S+++RHAPF WI+DL+ DP I PI+M SM Sbjct: 463 LYWVLFESVQLRHAPFMLWIQDLSVMDPYFIL-------------------PILMGASMM 503 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +QM ++P P D QA I+ MP++F FPAGL++YW +N++SI QQ I + A Sbjct: 504 LQMSLNPTPPDPMQAKIMKLMPLIFTVFFLWFPAGLVLYWLVNNILSISQQWYITRKIEA 563 Query: 563 EIG 565 E+ Sbjct: 564 EVA 566 >gi|293611389|ref|ZP_06693685.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826261|gb|EFF84630.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 586 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 151/599 (25%), Positives = 260/599 (43%), Gaps = 71/599 (11%) Query: 3 RNWNYFVAIALSV----IIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPN 47 + W F + +++ AWQ Y E++ + N + + Sbjct: 2 QQWARFAILGAMFVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKNATVAS 61 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 V + A A A + ++ IN KG + L + S+ P Sbjct: 62 DVPQANIAQSQTTDATAPVNQQLISVQTDLYHIWINPKGGDIVRIELLSHDKSKDSDQPF 121 Query: 108 VTLLSPSNTKNAYFAELDYVS-------TANNIELPNSNTVWNLISGKILTPT------- 153 V L ++ K Y A+ + T + L K + Sbjct: 122 VML--ENDAKRTYVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQKGQSEKV 179 Query: 154 TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT--- 209 + +VFK + +T + + Y + V N S + G++ R + Sbjct: 180 LNVPMVFKTPEGVEIIKTFTFTQGQYPIVVKHQVINRSQQSWQGQMFGQLKRDNSEDPGK 239 Query: 210 ---ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP- 265 T G G D + K+++ + + N W+ I Y+ S +IP Sbjct: 240 SSQGIFTLGTFLGGAWGTPDAHYNKLKFANFSEEKV-NTEAKGGWVAIVQHYFVSAWIPG 298 Query: 266 ------SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 + + ++ + F++ I + G S+ L++G K + Sbjct: 299 NLKLTQANGQPYVAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSEL- 357 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 KDLA+ +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ Sbjct: 358 ---KDLAV-GLNQTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLS 413 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K Y S A M+ I P++ ++E+F + + Q M+ LYK +NPL+GC P+LLQ+P+ Sbjct: 414 SKSYRSMAKMRVIAPEMQRMKEEFGEDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPI 472 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F A+Y V+ S+E+RHAP+ GWI+DL+A DP I P+IM Sbjct: 473 FLALYWVLMESVELRHAPWLGWIQDLSAMDPWFIL-------------------PLIMGA 513 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MF Q ++P PAD QA + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 514 TMFAQQMLNPQPADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINK 572 >gi|226952826|ref|ZP_03823290.1| inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase [Acinetobacter sp. ATCC 27244] gi|226836447|gb|EEH68830.1| inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase [Acinetobacter sp. ATCC 27244] Length = 586 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 150/613 (24%), Positives = 265/613 (43%), Gaps = 73/613 (11%) Query: 3 RNWNYFVAIALSV----IIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPN 47 + W F + +++ AWQ Y + +++ + N Q + Sbjct: 2 QQWARFAILGAMFVTAYLLILAWQKDYGHAAPAPQQQAAVVSAHDVSADLPNAQNATAAS 61 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + + + ++ IN KG + L + + + P Sbjct: 62 DLPQANVTASQQATETTSVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDQSKNGDQPF 121 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNS-------NTVWNLISGKILTPT------- 153 V L + +N Y A+ + N T + + K + T Sbjct: 122 VMLENDAN--RTYVAQSGLIGLNGPDSSRNGRPMYDVEKTAYTMEDAKKMATTDGASSQV 179 Query: 154 TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH------K 206 + LVFK + +T + + Y + V N S + G++ R K Sbjct: 180 LTVPLVFKTPEGVEVIKTFTFTQGEYPITVKHQVVNRSQQNWQGQMFGQLKRDNSDDPGK 239 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP- 265 T G G D + K+S+ + N N+W+ + Y+ S +IP Sbjct: 240 SDQGIFTLGTFLGGAWGTPDAHYNKLKFSNFSDEKL-NLDAKNAWVAMVQHYFVSAWIPG 298 Query: 266 ------SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 + + ++ + F++ I + G S+ ++G K I Sbjct: 299 NLKLTQADGQPYTAKLESRQSADKMNIIGFTSPTINVPAGTSMEVDAKFYSGPK----IQ 354 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 KDLA+ +D+GW + IAK +F+ + +F+N+VGN+G +I+L T+ VKL+ +PL+ Sbjct: 355 SELKDLAV-GLNQTVDYGWLWPIAKLLFLGLQFFHNIVGNWGWSIILLTILVKLILWPLS 413 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K Y S A M+ I P++ ++E+F + Q M+ LYK +NPL+GC P+LLQ+P+ Sbjct: 414 SKSYRSMAKMRVIAPEMQRMKEEFGDDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPI 472 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F A+Y V+ S+E+RHAP+ WI+DL+A DP I P++M + Sbjct: 473 FLALYWVLMESVELRHAPWLLWIQDLSAMDPWFIL-------------------PLLMGV 513 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +M++Q ++P P D QA + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 514 TMYVQQMLNPQPTDPMQAKVFRLMPIIFTVFMLFFPAGLVLYWIVNNAITILQQSFINK- 572 Query: 560 HGAEIGLIDRLRS 572 E ++++ S Sbjct: 573 -SVEKDRLNKVES 584 >gi|71066698|ref|YP_265425.1| putative inner membrane protein translocase component YidC [Psychrobacter arcticus 273-4] gi|71039683|gb|AAZ19991.1| protein translocase subunit yidC [Psychrobacter arcticus 273-4] Length = 565 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 136/593 (22%), Positives = 254/593 (42%), Gaps = 60/593 (10%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY---- 53 M++ + + IA+ + +++ AW++ Y + E P+ + Sbjct: 1 MQKIFRVMIIIAMLITAYLLILAWRDDYADAPAVDTVPETATSVGADIPSTSGAAGDIPV 60 Query: 54 --------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A + + + + IN +G L+ Y + S+ Sbjct: 61 QTLPVDNGTVDNSAVTATPATDAGLITVTTDRYDIKINPEGGDIVYAALKQYDATLDSDK 120 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFK 161 P V L +N+ Y A+ + N I+ ++ + + T + L +K Sbjct: 121 PFVLL--ENNSNRVYVAQSGLIG-QNGIDTAEGRAKYSHTANNYVMEKGQQTLSVPLTYK 177 Query: 162 NANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT------ATNTF 214 + + +T S + Y I + N S + ++ R + + Sbjct: 178 -KDGVTITKTFSFTHDKYPIDISYKIQNASTAAWQGQMFAQLKRDDSKDPGMSDKGALSM 236 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 G D + K+ + ++ + W+GI Y+ S + P +F + Sbjct: 237 ATYLGGAWGTPDDPYNKLKFGNFNDGELTTTSDK-GWVGIVQHYFVSAWTPE---NFTGK 292 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 F G Y F++ + + P K +T L+AG K + L + Sbjct: 293 FFSRETGDD-YFIGFNSQPVNVAPDKQVTLNATLYAGPKVQSELKDVAAGLN-----QTV 346 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+G + I+K +F L+ + ++GN+G +I+L T+ VK + K Y S A M+ I P Sbjct: 347 DYGLLWPISKILFALLDGIHKIIGNWGWSIILLTILVKFALMWFSNKSYYSMAKMRAIAP 406 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 ++ L+E+ + + M+ +YK +NP+AGC PIL+Q+P+F A+Y V+ S+E+R Sbjct: 407 RLAALKEEHGDD-RMKMSQEMMAMYKEEKVNPMAGCLPILMQMPIFLALYWVLVESIELR 465 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 HAP+ WI+DL+A DP I P++M +SMF+Q +++P PAD Sbjct: 466 HAPWVLWIQDLSAMDPWFIL-------------------PLLMGVSMFVQQQLNPQPADP 506 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 QA ++ ++P++F + FPAGL++YW+ +N+ S+ Q ++ K E L Sbjct: 507 MQAKVMKFLPIIFTAFMLFFPAGLVLYWTVNNLFSMTHQYIVNKKVEEEQKLR 559 >gi|325123490|gb|ADY83013.1| putative inner membrane protein translocase component [Acinetobacter calcoaceticus PHEA-2] Length = 574 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 149/582 (25%), Positives = 256/582 (43%), Gaps = 67/582 (11%) Query: 16 IIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 +++ AWQ Y E++ + N + + V + A A A Sbjct: 7 LLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKNATVASDVPQANIAQSQTTDATA 66 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + ++ IN KG + L + S+ P V L ++ K Y A+ Sbjct: 67 PVNQQLISVQTDLYHIWINPKGGDIVRIELLSHDKSKDSDQPFVML--ENDAKRTYVAQS 124 Query: 125 DYVS-------TANNIELPNSNTVWNLISGKILTPT-------TPIKLVFKNANNILFER 170 + T + L K + + +VFK + + Sbjct: 125 GLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQKGQSEKVLNVPMVFKTPEGVEIIK 184 Query: 171 TISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT------ATNTFGVQEGFIAV 223 T + + Y + V N S + G++ R + T G G Sbjct: 185 TFTFTQGQYPIVVKHQVINRSQQSWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFLGGAWG 244 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSFHSQFK 276 D + K+++ + + N W+ I Y+ S +IP + + ++ + Sbjct: 245 TPDAHYNKLKFANFSEEKV-NTEAKGGWVAIVQHYFVSAWIPGNLKLTQANGQPYVAKLE 303 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 F++ I + G S+ L++G K + KDLA+ +D+ Sbjct: 304 SRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSEL----KDLAV-GLNQTVDY 358 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ I P++ Sbjct: 359 GWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRVIAPEM 418 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++E+F + + Q M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+RHA Sbjct: 419 QRMKEEFGEDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELRHA 477 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ GWI+DL+A DP I P+IM +MF Q ++P PAD Q Sbjct: 478 PWLGWIQDLSAMDPWFIL-------------------PLIMGATMFAQQMLNPQPADPMQ 518 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 A + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 519 AKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINK 560 >gi|88608477|ref|YP_506289.1| inner membrane protein, 60 kDa [Neorickettsia sennetsu str. Miyayama] gi|88600646|gb|ABD46114.1| inner membrane protein, 60 kDa [Neorickettsia sennetsu str. Miyayama] Length = 566 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 192/571 (33%), Positives = 315/571 (55%), Gaps = 26/571 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M++ +N F+A LS +++ W + P E +E + ++VK ++++ + Sbjct: 1 MQQTYNVFIATLLSFLVIIGWNLVFYNPTQRESFHEVQKKESVKVYESLESTLS------ 54 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + R+++ + L GSI L G DDL L+ Y D + LL P+ TK AY Sbjct: 55 -------TERIKISSSKLEGSIQLTGLALDDLILKDYKSDDLKDQ--YRLLYPNKTKGAY 105 Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 F + + + P+S T W S ++LTP +P+ + N +LF+ +S+D++Y+ Sbjct: 106 FINPGWTIPGDPGLRTPSSKTKWQADS-ELLTPGSPVTFSWDNGFGLLFKVVVSIDDNYM 164 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F V N S + + I + P+T + + EG + V+ D+ L+E KYS I K Sbjct: 165 FTFKQIVENKSQNDLSVGSHFTITKSLPETNKSMLIMHEGPVGVVKDQ-LMELKYSKIAK 223 Query: 240 SSIS-----NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG-HARYQAKFSANE 293 + S + W G SDKYW I + ++ D ++ + Sbjct: 224 KNKSIAFDEDTQNQRGWFGFSDKYWFVSQIFENSSDGKVYISHIDDKSDDIFRITNFNAQ 283 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + G I LFAG K+ + Y +++ I F+ +D+G YFI KP+ L+ F Sbjct: 284 KIVRGGGLIVKETMLFAGPKKLSLLEEYAQNMRIYLFDRAVDFGVLYFITKPISKLLQVF 343 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 ++LVGNFG+AI+L T F+++L PL+ K +S +K +QP+I +++ ++ L + Sbjct: 344 HHLVGNFGVAIILLTFFIRVLMLPLSIKSGISMFKIKELQPEILKIKSMYQNDKD-ALNR 402 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A ++L++ H + P++GC P LLQ+PVFFA+YKVI I++EMR APF+ WI DL+ DPTN+ Sbjct: 403 ASVELFRKHRVTPMSGCLPTLLQVPVFFALYKVIFITVEMRQAPFFLWISDLSLPDPTNL 462 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMILNWMPVVFVFALS 532 FTLFG++ + P F+ +GI PII+ L+M IQ K+SP D G QA ++ MP VF+ + Sbjct: 463 FTLFGLIDWNCPDFLSIGILPIILGLTMVIQQKLSPSHYDDGTQAFMIKAMPYVFMILFA 522 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 SFP+GL++YW ++NV+S++QQ VI K + Sbjct: 523 SFPSGLVLYWVFNNVLSLLQQFVIGKYLFTK 553 >gi|312882242|ref|ZP_07741988.1| putative inner membrane protein translocase component YidC [Vibrio caribbenthicus ATCC BAA-2122] gi|309370086|gb|EFP97592.1| putative inner membrane protein translocase component YidC [Vibrio caribbenthicus ATCC BAA-2122] Length = 551 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 150/582 (25%), Positives = 254/582 (43%), Gaps = 57/582 (9%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ N + I L S ++ WQ F P + I+ V+ + + +A Sbjct: 1 MDSQRN-ILLIGLAMVSFLLFTKWQQFQDKPS--------QPIEQVQSSSALPVQNSADE 51 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 +D S + + +K L SI+ G +L Y + P V L Sbjct: 52 LDAAPVQTSSAKTISVKTDVLTLSIDTVGGDVVHADLNQYAEQMDKPDPFVLL--KDKPS 109 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTIS 173 + + A+ + ++L + + + + + +K AN + + +T Sbjct: 110 HIFIAQSGLIGPQG-VDLKTQRPAYLVNGDSFVLADGQDELSVPMTYK-ANGLEYTKTFI 167 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVE 231 Y + V N+S + + + T G D + Sbjct: 168 FKRGSYAIDVKYDVVNHSGSNATIGAYAHLRQTLLDDGGSITMPTYRGGAYSDQDTRYKK 227 Query: 232 QKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA--- 287 + D++ S+S + W+ + Y+A+ +IP E + +S+ + A Sbjct: 228 YSFDDMQDKSLSITLPDGKGWVAMIQHYFATAWIPRNEPDTKIYTRVVSNDNTFDPAQDN 287 Query: 288 -----KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 TI G L+ G K + +L ++++D+GW +FI Sbjct: 288 TVGDIGIRMPNKTIADGDKAQFLATLWVGPKLQDQMAEVADNL-----DLVVDYGWLWFI 342 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+ L+SY +N VGN+G AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Sbjct: 343 AKPLHSLLSYIHNFVGNWGFAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRER 402 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q + + M++LYK +NPL GC P+LLQ+P+F A+Y + S+E+RH+PF+GWI Sbjct: 403 IGDD-RQRMSQEMMELYKKEKVNPLGGCLPLLLQMPIFIALYWALMESVELRHSPFFGWI 461 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521 DL+A DP I P++M SMF+ KMSP D Q I+ Sbjct: 462 TDLSAKDPYFIL-------------------PLLMGASMFMIQKMSPTTVTDPMQQKIMT 502 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +MPV+F F FP+GL++YW SN+++++QQ +I K + Sbjct: 503 FMPVMFTFFFIFFPSGLVLYWLVSNIVTLIQQTLIYKSLEKK 544 >gi|323143418|ref|ZP_08078103.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain [Succinatimonas hippei YIT 12066] gi|322416823|gb|EFY07472.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain [Succinatimonas hippei YIT 12066] Length = 548 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 135/550 (24%), Positives = 247/550 (44%), Gaps = 53/550 (9%) Query: 47 NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + + A + + A + +++K+ +L +++LKG D L ++ + P Sbjct: 33 SAEQAAQAEIFNNSIAASEGAGKLIKIKSDALELTVDLKGGDIVDAKLCKVKQELGKDDP 92 Query: 107 IVTLLSPSNTKNAYFAELDYVSTAN-----NIELPNSNTVWNLISGKILTPTTPIKLVFK 161 L+S N Y A+ + L G+ T + L F+ Sbjct: 93 FHLLMSEPNF--VYLAQSGLTGKDGPDSKVRPTFTTDANEYVLADGE---DTLSVNLTFE 147 Query: 162 NANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH---KPQTATNTFGV- 216 + + + +T +L+ + Y+ + V NNS + + G++ + Q + FG+ Sbjct: 148 Q-DGVTYVKTYTLNRDSYVVDVSYKVVNNSGKDLSMAFYGQLKQTVDVSQQQNSGAFGMV 206 Query: 217 ---QEGFIAVLGDKSLVEQKYSDI----EKSSISNFHESNSWLGISDKYWASVFIPSKET 269 G ++ + D+ ++ N W+ + Y+ + +I + Sbjct: 207 AGAYRGSAYSTDSTRYEKETFDDLVDLSKEKQNLNVQTKGGWVAMIQHYFVASWIGDTDE 266 Query: 270 SFHSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + + S R I G + ++ G K + +L P Sbjct: 267 NVENVIYSNSSNADRDAIIGIRTEPTVIQNGSEHDFKSKMWIGPKNQDNM-----ELVAP 321 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 ++ +D+GW +FI+ P+F ++ + ++ +GN+G +I++ T+ V+ + FPL K QY S A Sbjct: 322 NLDLTVDYGWLWFISIPLFKILEFIHSYIGNWGFSIIVLTLVVRSVLFPLTKAQYTSMAK 381 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ + PK+ ELRE++K Q L + ++LYKT +NPL GC+P+L+Q+P+F A+Y + Sbjct: 382 MRLLTPKMQELRERYKDD-RQKLGQETMRLYKTEKVNPLGGCFPLLIQMPIFIALYWTLM 440 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S E+RHAPF GWI DL+ DP + P++ ++M+ KMS Sbjct: 441 ESTELRHAPFIGWIADLSVHDPYFVT-------------------PLLYGVTMYFIQKMS 481 Query: 509 PPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P P D Q ++ MP VF F +FPAGL +YW SN +I QQ +I K + Sbjct: 482 PTPITDPMQRKVMMAMPFVFTFMFCTFPAGLTLYWLVSNCFTIFQQIIIYKSLEKKG--- 538 Query: 568 DRLRSTFSKN 577 ++++ K Sbjct: 539 LQIKAEKVKK 548 >gi|313669125|ref|YP_004049409.1| integral membrane protein [Neisseria lactamica ST-640] gi|313006587|emb|CBN88052.1| putative integral membrane protein [Neisseria lactamica 020-06] Length = 545 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 145/582 (24%), Positives = 242/582 (41%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ P + + Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKP--------------VPTPQQAAQQQAVTA 44 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 AL+ + + + ++ I+ K L L Y + P V L + Sbjct: 45 SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDEHKPFV--LFGDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + ++L N + ++ + Y Sbjct: 103 YVAQSELLDAQGNNVLKGIGFTAAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKGSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + +TN S RI+R + Q + + G + + + +SD Sbjct: 163 LVNVRFDITNTGGKPANLSADYRIVRDRSQPEGQGYFTRSYLGPVVYTPEGGFQKVGFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHA 283 ++ + S WLG+ + ++ S +I P S + + D Sbjct: 223 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCAAGECNIDIKRRNDK 282 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y A I G T L+AG + I + ++ D+G ++ A Sbjct: 283 LYSASVGVPLAAIPAGAKAETAVNLYAGPQTTSVIAGIAD-----KLQLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ +DP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 457 DLSRSDPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 539 >gi|89902989|ref|YP_525460.1| 60 kDa inner membrane insertion protein [Rhodoferax ferrireducens T118] gi|89347726|gb|ABD71929.1| protein translocase subunit yidC [Rhodoferax ferrireducens T118] Length = 571 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 136/593 (22%), Positives = 245/593 (41%), Gaps = 57/593 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M + + +V W + + + + T P + A V Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDQWQVFNGHKATFFPSASNTAATAHPPVPASSVPAGVPT 60 Query: 59 DDRA------------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 + + + R+ + L + + +GA + Sbjct: 61 ANTVAAAAQMTGAAAGLTSTTDASAAAHERLVVTTDVLKLTFDTEGASVVQTEFVRHADM 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV- 159 + V L SN + Y A+ ++ A P TV + G+ +LV Sbjct: 121 ADKSKHFVLL--ESNKDHTYMAQTGLIAGAAGGTFPTHKTVMTVAPGERTLQEGSNQLVI 178 Query: 160 -FKNA--NNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNT 213 F++ + +T +L Y + V N + +++R KP + Sbjct: 179 RFESPELGGVKLVKTFTLTRGTYAVAVKHEVVNVGTAAVSPQLYLQLVRDGTKPLGESKF 238 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFH 272 + G K + + DIE + + + + ++ + Y+AS ++ Sbjct: 239 YSTFTGPAIYTEAKKYQKVDFKDIENNKVDVEKTAESGYVAMVQHYFASAWLLGDGIKRD 298 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + + Y I PG S + FAG +E + P E+ Sbjct: 299 LFLRKVDTN--LYAVGMITPMDNIAPGASKSVEARFFAGPQEEKVLEAL-----APGLEL 351 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + D+GW +AKP++ L+ + +GN+G +I+ + +K F+ L K Y S A MK + Sbjct: 352 VKDYGWLTILAKPLYWLLHAIESFLGNWGWSIVALVLLLKAAFYWLNAKAYASMAKMKAV 411 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PK+ E+RE+ K +P Q +Q+ M+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+E Sbjct: 412 NPKVTEMRERLKDNPQQ-MQQEMMRIYREEKVNPMGGCFPIMIQIPVFIALYWVLLASVE 470 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MR+AP+ WI DL++ DP I P++M+L+ +Q ++P P Sbjct: 471 MRNAPWILWIHDLSSPDPFYIL-------------------PLVMTLTTVLQTSLNPAPP 511 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 D QA ++ +MP+ F FPAGL++YW +N++SI QQ +I G Sbjct: 512 DPMQAKMMWFMPLAFSVMFFFFPAGLVLYWITNNILSIAQQWLINTRMGVPPK 564 >gi|209519687|ref|ZP_03268476.1| 60 kDa inner membrane insertion protein [Burkholderia sp. H160] gi|209499904|gb|EDZ99970.1| 60 kDa inner membrane insertion protein [Burkholderia sp. H160] Length = 552 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 153/579 (26%), Positives = 259/579 (44%), Gaps = 50/579 (8%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + N P + Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPNTTPTQTAGSAAPGTTTPGTQPADL 60 Query: 59 DDRAQALS-------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + A S V+ G I+ +G L+L D ++TL Sbjct: 61 PATSAAAPGNAPAAAQSQLVKFSTDVYSGEIDTRGGTVSRLSLVK-QGDGKQPDLVITLF 119 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNL---ISGKILTPTTPIKLVFKNA--NNI 166 +N + Y A + + PN N V+ L +++ ++ F++ + Sbjct: 120 DRTN-NHTYLARTGLLGG----DFPNHNDVFTLMPNQPTQLVDGQNSFQMSFESPEKGGL 174 Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVL 224 +T + Y+ + V N + ++R T F G Sbjct: 175 KVIKTYTFTRGSYVIGVETKVQNVGTTAVTPQVYMELVRDDQPVETPRFSHTFIGPAVYT 234 Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + + +SD++K+ +N W+ + Y+AS +IP + + + + Sbjct: 235 NEHHFQKMTFSDLDKNKQDFATSANDGWVAMVQHYFASAWIPQEGVKREFYAEKIDP--S 292 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ TI PG++++ + LFAG +E + P +++ D+GW IA Sbjct: 293 LYRVGMKQALPTIQPGQTVSVSARLFAGPEEEKMLAGI-----APGLDLVKDYGWVTIIA 347 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+S + LVGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+F Sbjct: 348 KPLFWLLSKIHGLVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERF 407 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI+ Sbjct: 408 KGDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIQ 466 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I PI+M++SMF+Q +++P P D QA ++ +M Sbjct: 467 DLSQQDPYFIL-------------------PILMAVSMFLQTRLNPTPPDPVQAKMMMFM 507 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P+ F FPAGL++Y+ +NV+SI QQ I +M G+ Sbjct: 508 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGS 546 >gi|115353266|ref|YP_775105.1| putative inner membrane protein translocase component YidC [Burkholderia ambifaria AMMD] gi|122321904|sp|Q0BAQ2|OXAA_BURCM RecName: Full=Inner membrane protein oxaA gi|115283254|gb|ABI88771.1| protein translocase subunit yidC [Burkholderia ambifaria AMMD] Length = 554 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 151/580 (26%), Positives = 249/580 (42%), Gaps = 52/580 (8%) Query: 1 MERNWNYFVAIALSVIIVY--AWQNFYVYPRIEEMNNERKNIQTVKQPNQVD-------- 50 M+ I ++ WQ + P + + + + Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGTGATTTTAGE 60 Query: 51 -NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + AA + + V+ G I+ +G L L+ D +T Sbjct: 61 VPAAAAGTAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK-QGDGKQPDLYIT 119 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI---SGKILTPTTPIKLVFKNA--N 164 L + + Y A + + PN N V+ + + +KL F++ Sbjct: 120 LFDHT-AGHTYLARTGLLGG----DFPNHNDVYTQVNAGPTSLTGDQNALKLSFESPVKG 174 Query: 165 NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIA 222 + +T + Y+ + + N + + ++R T F G Sbjct: 175 GVKVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAV 234 Query: 223 VLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 K + +SD++K+ + N W+ + Y+AS +IP + + + Sbjct: 235 YTDAKHFQKIDFSDLDKNKANFEKAADNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDP- 293 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 A Y+ I PG+S LFAG +E + P E++ D+GW Sbjct: 294 -ALYRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGI-----APGLELVKDYGWVTI 347 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+F L+ + VGN+G AI+L TV +K +FFPL+ Y S A MK I P++ LRE Sbjct: 348 IAKPLFWLLEKIHGFVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRE 407 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 +FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ W Sbjct: 408 RFKSDP-QKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILW 466 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I DL+ DP I P++M++SMF+Q ++P P D QA ++ Sbjct: 467 IHDLSQRDPFFIL-------------------PVLMAVSMFVQTSLNPTPPDPVQAKMMK 507 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 508 FMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 547 >gi|225025482|ref|ZP_03714674.1| hypothetical protein EIKCOROL_02382 [Eikenella corrodens ATCC 23834] gi|224941766|gb|EEG22975.1| hypothetical protein EIKCOROL_02382 [Eikenella corrodens ATCC 23834] Length = 543 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 145/584 (24%), Positives = 257/584 (44%), Gaps = 61/584 (10%) Query: 1 MERN---WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME N V ++++ + W F P+ E + Q A V Sbjct: 1 MESNNELKRTAVFAIIAILTLMVWNYFNPQPQQPEQAAVQTEQQAA----------APVA 50 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 D L + + + +L I+ L+L ++ ++ L N + Sbjct: 51 GSD----LPPTKPITVSTDTLKAVIDENSGDLRGLDLLKHNSAGDASKTFTLL--SDNNE 104 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DE 176 + Y + + N L +S+ S + T ++L N + ++ + Sbjct: 105 HKYLVQSLLIDQKGNYLLQDSSFKAPQNSYTLNGDTLEVRLSAPETNGVQVDKVYTFRKG 164 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG--VQEGFIAVLGDKSLVEQKY 234 YL + + N++ ++ R++R + + G +A D + + + Sbjct: 165 SYLIDVRFDIANHTDAPLKLDGVYRVLRDSSTPEGSGYFNQTYVGPVAYTPDGNFQKVPF 224 Query: 235 SDIEKSSISNFH-------ESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR- 284 D++ S ++ W+G + Y+ +V++ P S L D R Sbjct: 225 KDLDDDFESKRDRADYQRTATSGWVGFTQHYFTTVWVLQPKDGNSICQNGNCLLDIKRRS 284 Query: 285 ---YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 Y A I G+ ++ L+AG +E+ I R E++ D+G + Sbjct: 285 DNLYSAGVRVPLPAIAAGQKLSVPAELYAGPQEYAVISKVAD-----RLELVKDYGRTHV 339 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +A P+F L+++ ++L+GN+G +I+L T+ VK L PL Y S A M+ + PK++ L++ Sbjct: 340 VAAPLFGLLNWLHSLIGNWGWSIVLLTIIVKTLLLPLTNASYRSMAKMRAVAPKLEMLKK 399 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + LQ+AM+++YK INPL GC P+LLQ PVF +Y V+ S+E+R A WGW Sbjct: 400 QHGDD-RMALQQAMMKMYKDEKINPLGGCLPMLLQFPVFIGLYWVLLASVELRQAS-WGW 457 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + DLA DP I PI+M+L+M+IQ K+SPPP+D QA ++ Sbjct: 458 VADLARPDPLYIL-------------------PILMALTMYIQTKLSPPPSDPMQAKMMK 498 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 MP+ F FPAGL++Y+ +N++S+ QQ +I + + Sbjct: 499 IMPLAFSVMFFFFPAGLVLYYVVNNLLSMGQQWLINRKINGAVK 542 >gi|172062138|ref|YP_001809790.1| putative inner membrane protein translocase component YidC [Burkholderia ambifaria MC40-6] gi|254772757|sp|B1YQJ7|OXAA_BURA4 RecName: Full=Inner membrane protein oxaA gi|171994655|gb|ACB65574.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria MC40-6] Length = 554 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 151/580 (26%), Positives = 249/580 (42%), Gaps = 52/580 (8%) Query: 1 MERNWNYFVAIALSVIIVY--AWQNFYVYPRIEEMNNERKNIQTVKQPNQVD-------- 50 M+ I ++ WQ + P + + + + Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGTGATTTTAGE 60 Query: 51 -NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + AA + + V+ G I+ +G L L+ D +T Sbjct: 61 VPAAAAGTAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK-QGDGKQPDLYIT 119 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI---SGKILTPTTPIKLVFKNA--N 164 L + + Y A + + PN N V+ + + +KL F++ Sbjct: 120 LFDHT-AGHTYLARTGLLGG----DFPNHNDVYTQVNAGPTSLTGDQNALKLSFESPVKG 174 Query: 165 NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIA 222 + +T + Y+ + + N + + ++R T F G Sbjct: 175 GVKVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAV 234 Query: 223 VLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 K + +SD++K+ + N W+ + Y+AS +IP + + + Sbjct: 235 YTDAKHFQKIDFSDLDKNKANFEKAADNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDP- 293 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 A Y+ I PG+S LFAG +E + P E++ D+GW Sbjct: 294 -ALYRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGI-----APGLELVKDYGWVTI 347 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+F L+ + VGN+G AI+L TV +K +FFPL+ Y S A MK I P++ LRE Sbjct: 348 IAKPLFWLLEKIHGFVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRE 407 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 +FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ W Sbjct: 408 RFKSDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILW 466 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I DL+ DP I P++M++SMF+Q ++P P D QA ++ Sbjct: 467 IHDLSQRDPFFIL-------------------PVLMAVSMFVQTSLNPTPPDPVQAKMMK 507 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 508 FMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 547 >gi|171316349|ref|ZP_02905569.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria MEX-5] gi|171098478|gb|EDT43280.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria MEX-5] Length = 554 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 150/580 (25%), Positives = 249/580 (42%), Gaps = 52/580 (8%) Query: 1 MERNWNYFVAIALSVIIVY--AWQNFYVYPRIEEMNNERKNIQTVKQPNQVD-------- 50 M+ I ++ WQ + P + + + + Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGTGATTTTAGE 60 Query: 51 -NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + AA + + V+ G I+ +G L L+ D +T Sbjct: 61 VPAAAAGTAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK-QGDGKQPDLYIT 119 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI---SGKILTPTTPIKLVFKNA--N 164 L + + Y A + + PN N V+ + + +KL F++ Sbjct: 120 LFDHT-AGHTYLARTGLLGG----DFPNHNDVYTQVNAGPTSLTGDQNALKLSFESPVKG 174 Query: 165 NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIA 222 + +T + Y+ + + N + + ++R T F G Sbjct: 175 GVKVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAV 234 Query: 223 VLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 K + +SD++K+ + N W+ + Y+AS +IP + + + Sbjct: 235 YTDAKHFQKIDFSDLDKNKANFEKAADNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDP- 293 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 Y+ I PG+S LFAG +E + P E++ D+GW Sbjct: 294 -TLYRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGI-----APGLELVKDYGWVTI 347 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+F L+ ++ VGN+G AI+L TV +K +FFPL+ Y S A MK I P++ LRE Sbjct: 348 IAKPLFWLLEKIHSYVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRE 407 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 +FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ W Sbjct: 408 RFKSDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILW 466 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I DL+ DP I P++M++SMF+Q ++P P D QA ++ Sbjct: 467 IHDLSQRDPFFIL-------------------PVLMAVSMFVQTSLNPTPPDPVQAKMMK 507 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 508 FMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 547 >gi|109900610|ref|YP_663865.1| 60 kDa inner membrane insertion protein [Pseudoalteromonas atlantica T6c] gi|123360110|sp|Q15MS7|OXAA_PSEA6 RecName: Full=Inner membrane protein oxaA gi|109702891|gb|ABG42811.1| protein translocase subunit yidC [Pseudoalteromonas atlantica T6c] Length = 543 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 140/563 (24%), Positives = 254/563 (45%), Gaps = 37/563 (6%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME + F+ I L S ++ WQ Y + + +++ N Sbjct: 1 MESQRS-FLLIGLAMVSFLLWQQWQVDYGPQPAQPVESQQTTGSDAPNSNGDVPIATPTN 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + +L SIN G NL Y L+ S +LL PS Sbjct: 60 KSALPTQSVVGKVISVTTDTLQLSINTVGGDVISANLLKYPLEQGS-QGTYSLLRPSG-P 117 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DE 176 + A+ V T + + S + + + L + + +L + Sbjct: 118 TIFVAQSGLVGTNGIDKGSRPTYSVSQDSFVMEGDSLTVPLTYTAKSGLLVTKEFIFSKN 177 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQEGFIAVLGDKSLVEQKYS 235 + K+ V N S D G++ + + F G D+ + + Sbjct: 178 SHEVKVNYHVENTSSDVKSVKQFGQLKQSTADQGGSMFMPTYRGGAFSTEDERYEKYSFD 237 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D++ +++ W + + Y+ S ++P ++ + K +G+A F + Sbjct: 238 DMQDKNLNQV-TPAGWTAMIEHYFVSAWVPPQDQTNSLYSKMTQNGNAI--IGFIGQSVD 294 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I PG+S+ + L+ G K+ T+ + L ++ +D+G+ ++I+K +F + + ++ Sbjct: 295 IEPGQSVDIQSSLYLGPKDQDTLEKIARGL-----DLTVDYGFLWWISKYLFAFLQFIHS 349 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 L+GN+G +I+L T+ VK +PL K QY S A M+ ++PK+D L+E++ Q +Q+AM Sbjct: 350 LIGNWGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDK-QKMQQAM 408 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++YK +NP+ GC+P+LLQ+P+F A+Y V+ S+E+RHA F WI DL+ DP + Sbjct: 409 MEMYKKDKVNPMGGCFPLLLQMPIFLALYWVLLESVELRHANFIFWITDLSVKDPYFVL- 467 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSF 534 PI+ LSM++ K+ P D Q I+ +MPV F Sbjct: 468 ------------------PILTGLSMYLLQKLQPMTMTDPMQQKIMQFMPVAMSLFFFIF 509 Query: 535 PAGLIIYWSWSNVISIVQQAVIM 557 PAGL++YW SN+I+++Q +I Sbjct: 510 PAGLVLYWLISNIITLIQAKIIY 532 >gi|30248404|ref|NP_840474.1| 60Kd inner membrane protein [Nitrosomonas europaea ATCC 19718] gi|34098399|sp|P59810|OXAA_NITEU RecName: Full=Inner membrane protein oxaA gi|30138290|emb|CAD84298.1| 60Kd inner membrane protein [Nitrosomonas europaea ATCC 19718] Length = 614 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 160/614 (26%), Positives = 266/614 (43%), Gaps = 69/614 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF------YVYPRIEEMN------NERKNIQTVKQPNQ 48 M+ N + I S +++ W + + P + +N ++ P Sbjct: 1 MD-NKKIVLLIIFSTSLLFLWDAWIKEQEKFNNPPAITQADSSAGSTQSRNDDSLPVPGS 59 Query: 49 VDNSYAAVLIDDRAQA------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 S A + A L ++ + +I I+ G L L Sbjct: 60 ELTSSQASPDTNGIPASGGNGDSVTPRLLPSGEQIRVVTDKVIAEIDTIGGDLRRLELLQ 119 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG------KIL 150 ++P L S + Y A+ V LPN T + S Sbjct: 120 QPSSEDKDTPYALLYSEA--ARTYIAQSGLVGEG----LPNHKTTFRAESDIRNYELSSG 173 Query: 151 TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--P 207 I+L+ A + +T + + Y+ + V N +R +++R P Sbjct: 174 EDKIVIRLLAPEAQGVQVIKTYTFHRDSYVIDVGFEVENKGDATVRPFAYFQMLRDGNPP 233 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPS 266 T G + + +SD++K+ +N W+ + + Y+ + ++P Sbjct: 234 PAKTMMIPTFLGAAVYTEEGKYQKIPFSDLDKNKADYPANANNGWIAMLEHYFLTAWLPQ 293 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 ++T K SD Y A I PG+ TT +AG +E + Sbjct: 294 QQTPREFFAKRQSDN--LYSAGVIVPAGVIAPGEIAATTMPFYAGPEEQDNLEGL----- 346 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++ +D+GW IAKP+F L+S++++ N+G+AI+L T+ VKLLFFPL+ Y S Sbjct: 347 APGLDLTVDYGWLTVIAKPLFRLLSFYHSWTDNWGVAIILLTMTVKLLFFPLSAAGYRSM 406 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A ++ + PK+ +++++K Q + +AM++ YK INP+ GC+PIL+QIPVF A+Y Sbjct: 407 AKLRLVTPKLKRIQDQYKGD-RQRMHQAMMEFYKEEKINPMGGCFPILVQIPVFIALYWT 465 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 I ++E+R+AP WI DL++ DP + P++M +SMF+Q K Sbjct: 466 ILAAVELRYAPLALWIDDLSSPDPFYML-------------------PLLMGISMFVQTK 506 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 ++P P D QA I+ MPV F FPAGL++Y +N++SI QQ I KM+G Sbjct: 507 LNPTPTDPLQAKIMQIMPVAFSAIFFFFPAGLVLYSLVNNILSIAQQWKITKMYGTAPS- 565 Query: 567 IDRLRSTFSKNYNS 580 D SK NS Sbjct: 566 KDTPEPPVSKQVNS 579 >gi|295678214|ref|YP_003606738.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Burkholderia sp. CCGE1002] gi|295438057|gb|ADG17227.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Burkholderia sp. CCGE1002] Length = 552 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 151/579 (26%), Positives = 258/579 (44%), Gaps = 50/579 (8%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + + P + Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSTTPTQTAGTAAPGTTTPGTQPADL 60 Query: 59 DDRAQAL-------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A S V+ G I+ +G L+L D ++TL Sbjct: 61 PATNAAAPGNAPAAEQSQLVKFGTDVYTGEIDTRGGTLSRLSLIK-QGDGKQPDLVITLF 119 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVFKNA--NNI 166 +N+ + Y A + + PN N V+ L+ + + ++ F++ + Sbjct: 120 DKTNS-HTYLARTGLLGG----DFPNHNDVFTLMPNQPTHLADGQNSFQMSFESPEKGGL 174 Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVL 224 +T + Y+ + V N + ++R T F G Sbjct: 175 RVIKTYTFTRGSYVIGVETKVQNVGTAPVTPQVYMELVRDDQPVETPRFSHTFIGPAVYT 234 Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + + + D++K+ +N W+ + Y+AS +IP + + + + Sbjct: 235 NEHHFQKMTFGDLDKNKQDFATSANDGWVAMVQHYFASAWIPQEGVKRDFYAEKIDP--S 292 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ TI PG++++ + LFAG +E + P +++ D+GW IA Sbjct: 293 LYRVGMKQAMPTIQPGQTVSVSARLFAGPEEEQMLAGI-----APGLDLVKDYGWVTIIA 347 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+S ++ VGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+F Sbjct: 348 KPLFWLLSKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERF 407 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI+ Sbjct: 408 KGDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWIWWIQ 466 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I P++M++SMF+Q K++P P D QA ++ +M Sbjct: 467 DLSQQDPYFIL-------------------PVLMAVSMFLQTKLNPTPPDPVQAKMMMFM 507 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P+ F FPAGL++Y+ +NV+SI QQ I +M GA Sbjct: 508 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGA 546 >gi|253997709|ref|YP_003049773.1| 60 kDa inner membrane insertion protein [Methylotenera mobilis JLW8] gi|253984388|gb|ACT49246.1| 60 kDa inner membrane insertion protein [Methylotenera mobilis JLW8] Length = 554 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 155/574 (27%), Positives = 258/574 (44%), Gaps = 47/574 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER-----KNIQTVKQPNQVDNSYAA 55 M+ + + S+ I+ W + + + + + + A Sbjct: 1 MD-TRRLVLFVIFSMSILMLWDAWQTKHAPVPVAPVASVGSVPSTEAGAEVGAEVGAAAI 59 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 D A AL + + +IN G L LR + + N LL + Sbjct: 60 DAPVDTAYALKSGQNIAVTTDLYKININTMGGDLRKLELRKHRA--NDNLSNFLLLDDAA 117 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISG----KILTPTTPIKLVFKNANNILFERT 171 Y A+ + +LP NTV++ + + ++L + N + ++ Sbjct: 118 KPMLYVAQTGLIGQ----DLPTHNTVFSSTAPSYQMQDGQDKLEVRLSAVS-NGVAVDKV 172 Query: 172 ISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSL 229 + + Y + + NN+ I +I+ + + G Sbjct: 173 YTFHRNRYEIDVNYEIKNNTSVAITPVVYYQIVHDSESNQGSALMPTFTGGTYYTEAGKF 232 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + + D+ K + N ++ W+GI Y+ S +IP + + LS ++ Sbjct: 233 KKLAFKDMAKEPL-NITTNDGWVGILQHYFVSAWIPKDGLARKFYTEKLSSN--IFRIGT 289 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + TI PG ++T L++G + + A P E +D+GW IA P+F L Sbjct: 290 KSTLSTIQPGATLTVPARLYSGPQTKNDLIA-----AAPGLEYSVDYGWLTVIASPLFWL 344 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S ++LV N+G+AI+L T+ +K FF L+ Y S A M+ + P++ ++EKF Q Sbjct: 345 LSKIHSLVQNWGVAIILLTILIKAAFFKLSASGYRSMAQMRELAPRLQSMKEKFGDD-RQ 403 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 +Q AM+ LYK INP+ GC+PIL+Q+PVF A+Y V+ S+E+RHAPF+GWI+DL+A D Sbjct: 404 KMQMAMMDLYKKEKINPMGGCFPILIQVPVFIALYWVLLGSIELRHAPFFGWIQDLSAID 463 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P + PI+M +M +Q K++P P D QA ++ WMPVVF Sbjct: 464 PFYVL-------------------PILMGATMIVQTKLNPKPTDPMQAKVMTWMPVVFSV 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW +NV+SI QQ + KM AE Sbjct: 505 FFFFFPAGLVLYWLVNNVLSIAQQWYVNKMIHAE 538 >gi|90415380|ref|ZP_01223314.1| inner membrane protein, 60 kDa [marine gamma proteobacterium HTCC2207] gi|90332703|gb|EAS47873.1| inner membrane protein, 60 kDa [marine gamma proteobacterium HTCC2207] Length = 560 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 139/583 (23%), Positives = 261/583 (44%), Gaps = 56/583 (9%) Query: 1 MERNWNY-FVAI-ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD-------- 50 M+ + AI ++ +++ W NF + ++++ T+ QP+Q+ Sbjct: 1 MDWKKSLNIAAIGFVAWLLIIEWSNF--QDDVASQIPQQESELTIPQPSQLPTLETQQVN 58 Query: 51 --NSYAAVLIDDRAQALSM---SPRVELKNPSLIGSINLKGAQFDDLNLRGY--HLDVSS 103 + +LID A + + V + ++ +I+ G + L + + Sbjct: 59 QFSDELPLLIDTPAAVVETRVDARLVTVTTDAVEVTIDTLGGDIVQVKLLKHLTKMSEDG 118 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP---IKLVF 160 P L ++KN Y A+ + S L P + L Sbjct: 119 GEPFTLLTR--SSKNEYIAQSGLIGKNGTDTREGRGAYSTSASQFSLEPNQSALNVDLTL 176 Query: 161 KNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ---TATNTFGV 216 N N + + S Y+ + + N+ + + G+I R + ++ Sbjct: 177 -NQNGVRLVKRFSFSRSGYVIGVSYLINNSGYEPWEATFYGQIKRDSHEPLVESSGGIQP 235 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G DK+ + +SDI+ ++ + E W+ + Y+ S +IP + + + Sbjct: 236 YLGAALREADKNFAKHDFSDIQDETVKSSIE-GGWVAMVQHYFVSAWIPPGDQKNNFSLR 294 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 LS G Y F+ +I + G + G K+ + ++ +D+ Sbjct: 295 KLS-GQDVYLMGFTGEKINVASGSYGEYMAQFYVGPKDQAKLEEL-----AEYLDLTVDY 348 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G+ + +AKP+F M + + +VGN+G +I+L T+ +K+L +PL+ S A M+++QPK+ Sbjct: 349 GFLWMLAKPIFAAMKFIHEVVGNWGWSIILLTIGIKILLYPLSAASLRSMAKMRSLQPKM 408 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 + L+E + Q + + ++ LYK +NP GC+P+LLQ+PVF A+Y V+ S+E+RH+ Sbjct: 409 ERLKETYGDD-RQKMSQELMGLYKKEKVNPAGGCFPMLLQMPVFLALYWVLLESVEIRHS 467 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ WI DL+A DP I P++M SM + K+ P P D Q Sbjct: 468 PWIFWIDDLSAKDPYFIL-------------------PLVMGASMLLMQKLQPMPTDPTQ 508 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 AM++ MP+ F F FP+GL++YW+ +N++S+ QQ + + Sbjct: 509 AMVMKIMPIAFTFFFMIFPSGLVLYWTVNNLLSMFQQWYVNRQ 551 >gi|171061052|ref|YP_001793401.1| 60 kDa inner membrane insertion protein [Leptothrix cholodnii SP-6] gi|170778497|gb|ACB36636.1| 60 kDa inner membrane insertion protein [Leptothrix cholodnii SP-6] Length = 559 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 143/585 (24%), Positives = 246/585 (42%), Gaps = 53/585 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF--------YVYPRIEEMNNERKNIQTVKQPNQVDNS 52 M + S+ +V W + P+ + T P ++ Sbjct: 1 MTDLRRALLWGVFSISLVMLWDGWSRHTGQPSMFDPKPAARSVPLAANGTSSVPVPAASA 60 Query: 53 YAAVLIDDRAQALSMSPRVE----LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A + + A + + L + + + +G + L Y D SS S V Sbjct: 61 AAGAALPVASSASAAAVSAAEKVVLTTDVVKATFDSRGGTLVSIELLKY-ADPSSASGHV 119 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK-ILTP---TTPIKLVFKNAN 164 L S + Y AE + T LP+ T+ N+++G L + A+ Sbjct: 120 MLFDQS-PQRHYMAESGLIGTGQPGTLPDHTTLMNVVAGDRTLGDGKSELQARFESTAAD 178 Query: 165 NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFI 221 + +T +L Y+ + V N + +++R A++ + G Sbjct: 179 GVKLVKTYTLRRGDYVIDVQHEVLNQGAAAVSPQLYLQLVRDGNPLPDASSFYSTFTGPA 238 Query: 222 AVLGDKSLVEQKYSDIEKSSISN-----FHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 + ++SDIEK + + W+ + Y+A+ ++P + + Sbjct: 239 VYSEAGKFQKIEFSDIEKRKAGDKVDHVTSAEDGWVAMVQHYFAAAWLPGDKVQREFFSR 298 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 +SD Y + P S LF G +E I P +++ D+ Sbjct: 299 KVSDN--LYAVGMLLPVGEVAPAASRKIDARLFVGPQEEKRIEAL-----APGLDLVKDY 351 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW ++KP+F L+ ++ +GN+G AI+ V +K F+ L Y S MK I PK+ Sbjct: 352 GWLTILSKPLFWLLHKLHSYIGNWGWAIVALVVLLKAAFYWLNASAYRSMGKMKAINPKV 411 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ELRE+ K PQ +Q+ M+++Y+ +NPL GC PI +Q+P F A+Y V+ S+EMR A Sbjct: 412 QELRERLK-DKPQQMQQEMMRIYREEKVNPLGGCLPIFVQMPFFIALYWVLLSSVEMRGA 470 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ GW+ DL+ DP I P++M+ + +Q ++P P D Q Sbjct: 471 PWVGWVHDLSVKDPYFIL-------------------PLLMTATTVLQTWLNPTPPDPIQ 511 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 A ++ MP+ F FPAGL++YW +N++SI QQ +I + G Sbjct: 512 AKMMWIMPLAFSVMFFFFPAGLVLYWFTNNLLSIAQQWMINRQLG 556 >gi|170694073|ref|ZP_02885229.1| 60 kDa inner membrane insertion protein [Burkholderia graminis C4D1M] gi|170141145|gb|EDT09317.1| 60 kDa inner membrane insertion protein [Burkholderia graminis C4D1M] Length = 552 Score = 435 bits (1119), Expect = e-119, Method: Composition-based stats. Identities = 150/578 (25%), Positives = 247/578 (42%), Gaps = 50/578 (8%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV-- 56 M+ I ++ WQ + P + + P Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTAGSAAPGTTTPGTQPADL 60 Query: 57 -----LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + S V+ G I+ +G L+L +V L Sbjct: 61 PATNAAAPANTPAATQSQLVKFSTDVYSGEIDTRGGTLSKLSLVK--QGDGKQPDLVITL 118 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPIKLVFKNA--NNI 166 + Y A + + PN N ++ L+ + L F++ + Sbjct: 119 FDRAGNHTYLARTGLLGG----DFPNHNDIYTLMPNQQTELKGDQKSFSLSFESPVKGGL 174 Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVL 224 +T + Y+ + + N + S ++R T F G Sbjct: 175 KVIKTYTFTRGSYVIGVDTKIQNVGTAPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYT 234 Query: 225 GDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + + DI+K+ ++ N W+ + Y+AS +IP + + + A Sbjct: 235 EQNHFQKMTFGDIDKNKEDYAKQADNGWIAMVQHYFASAWIPQQGVKRDIYVEKIDP--A 292 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ I PG+++ + LFAG +E + P E++ D+GW IA Sbjct: 293 LYRVGVKQPVAAIAPGQTVDVSARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIA 347 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ ++ VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+F Sbjct: 348 KPLFWLLEKIHSYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERF 407 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI Sbjct: 408 KGDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWVLWIH 466 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I P++M++SMF+Q K++P P D QA ++ +M Sbjct: 467 DLSQQDPYFIL-------------------PVLMAVSMFLQTKLNPTPPDPVQAKMMMFM 507 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P+ F FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 508 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|167843727|ref|ZP_02469235.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei B7210] Length = 499 Score = 435 bits (1118), Expect = e-119, Method: Composition-based stats. Identities = 146/500 (29%), Positives = 229/500 (45%), Gaps = 44/500 (8%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI--VTLLSPSNTKNAYFAELDYVS 128 V G I+ +G L L P VTL + + Y A + Sbjct: 26 VRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPDLSVTLFDHT-ANHTYLARTGLLG 81 Query: 129 TANNIELPNSNTVWNLISGKI--LTPTTPIKLVFKNA--NNILFERTISLDE-HYLFKIV 183 + PN N V+ ++G +KL F++ + +T + Y+ + Sbjct: 82 G----DFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVD 137 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 + N + S ++R T F G K + + DI+K+ Sbjct: 138 TKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKA 197 Query: 243 SNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 + N W+ + Y+AS +IP + + Y+ I PG+S Sbjct: 198 DYVTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPGQS 255 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G Sbjct: 256 ADVSARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWG 310 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK P Q + A+++LYKT Sbjct: 311 WAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDP-QKMNAALMELYKT 369 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 370 EKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFIL------- 422 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y Sbjct: 423 ------------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLY 470 Query: 542 WSWSNVISIVQQAVIMKMHG 561 + +NV+SI QQ I + G Sbjct: 471 YVVNNVLSIAQQYYITRTLG 490 >gi|74318843|ref|YP_316583.1| protein translocase subunit yidC [Thiobacillus denitrificans ATCC 25259] gi|123611090|sp|Q3SF38|OXAA_THIDA RecName: Full=Inner membrane protein oxaA gi|74058338|gb|AAZ98778.1| preprotein translocase subunit YidC [Thiobacillus denitrificans ATCC 25259] Length = 546 Score = 435 bits (1118), Expect = e-119, Method: Composition-based stats. Identities = 154/568 (27%), Positives = 245/568 (43%), Gaps = 43/568 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ + I S ++ W+ + + A Sbjct: 1 MDNQR-LILFIVFSFSLLLLWEAWQDKQAPAPATRPVAGAPAGSAAPTPSTALNAPAAAP 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + R ++ L +I+ G +L L GY N TL S T+ Y Sbjct: 60 AQTGFAKGARAVVETDVLRATIDANGGDLRELQLLGYRETEDKNRVF-TLFEDSRTR-PY 117 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKI-LTPT---TPIKLVFKNAN-NILFERTISLD 175 A+ +V LP + + L G LT + LV+ +A + E+T Sbjct: 118 LAQSGFVGGG----LPTHRSTFELTPGTYRLTGGAARLEVPLVWNDAARGVRVEKTFIFT 173 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQ 232 + + V N + + +P + RH P+ + G K + Sbjct: 174 RGSHEVAVRTRVVNRGKEPLDLTPYYQFTRHGEAPRGESFFLYTYTGPAFYTDAKKFQKV 233 Query: 233 KYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 ++DI+ S +N W+G+ ++ + ++P + + L G Y A Sbjct: 234 PFTDIQDGSAEFEKTATNGWVGLVQHHFVAAWLPEESVKREYYARSL--GEGLYSAGVIL 291 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 E + PG+ T T L+AG + + A P ++ D+GW +A P+F + Sbjct: 292 AEGQLAPGQQKTFTVPLYAGPQSQAVLEK-----AAPGLDLARDYGWLTPLAYPIFWSLE 346 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 LVGN+G AI++ T+ +KL +PL+ Y S A MK + P++ +L+E + + L Sbjct: 347 KIERLVGNWGWAIIILTILIKLALYPLSAAGYKSMAKMKKLTPRLQQLKETYGDDRAK-L 405 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM ++YKT INPL GC PIL+QIPVF A+Y V+ ++EMR AP+ GWI DL A DP Sbjct: 406 HQAMAEMYKTEKINPLGGCLPILIQIPVFIALYWVLLAAVEMRGAPWLGWITDLTAPDPW 465 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 I PIIM ++ +Q+K++P P D QA I+ MPV F Sbjct: 466 YIL-------------------PIIMGVTSILQVKLNPQPMDPMQAKIMMIMPVAFTVMF 506 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKM 559 FPAGL++YW +N++SI QQ I K Sbjct: 507 VFFPAGLVLYWVVNNILSIAQQWAINKQ 534 >gi|167568260|ref|ZP_02361134.1| putative inner membrane protein translocase component YidC [Burkholderia oklahomensis C6786] Length = 497 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 145/502 (28%), Positives = 233/502 (46%), Gaps = 44/502 (8%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP--IVTLLSPSNTKNAYFAELDY 126 V G I+ +G L L+ + P VTL + + Y A Sbjct: 22 QLVRFSTDVYDGEIDTRGGTLAKLTLKK---EGDGKQPDLFVTLFDHA-ANHTYLARTGL 77 Query: 127 VSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNA--NNILFERTISLDE-HYLFK 181 + + PN N V+ ++G +KL F++ + +T + Y+ Sbjct: 78 LGG----DFPNHNDVYAQVAGPTSLSGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIG 133 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKS 240 + + N + + ++R T F G K + +SD++K+ Sbjct: 134 VDTKIDNVGTAPVTPTVYMELVRDNTPVETPLFSHTFLGPAVYTDQKHFQKINFSDVDKN 193 Query: 241 SISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + N W+ + Y+AS +IP + + + Y+ I PG Sbjct: 194 KADYVTSADNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPG 251 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 +S + LFAG +E + P E++ D+GW IAKP+F L+ + VGN Sbjct: 252 QSADVSARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEKIHGFVGN 306 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK P Q + A+++LY Sbjct: 307 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDP-QKMNAALMELY 365 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 KT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 366 KTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFIL----- 420 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL+ Sbjct: 421 --------------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLV 466 Query: 540 IYWSWSNVISIVQQAVIMKMHG 561 +Y+ +NV+SI QQ I + G Sbjct: 467 LYYVVNNVLSIAQQYYITRTLG 488 >gi|258544268|ref|ZP_05704502.1| YidC/Oxa1 family membrane protein insertase [Cardiobacterium hominis ATCC 15826] gi|258520506|gb|EEV89365.1| YidC/Oxa1 family membrane protein insertase [Cardiobacterium hominis ATCC 15826] Length = 557 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 141/580 (24%), Positives = 245/580 (42%), Gaps = 54/580 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT--------VKQPNQVDNS 52 M+ N + IA + I WQ + + T P + Sbjct: 1 MKNNPKLLLYIAAAFIAFLLWQKWQIANLPPTPTTASVPAATDVPQGTPGSDVPAATSGT 60 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 + + D +A + + +K L I KG L Y + + + P+ L Sbjct: 61 RSDIPGDTQADTTANGAVIHVKTDVLELDIANKGGTIVHTTLPAYPENKNGDKPLALLH- 119 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNT------VWNLISGKILTPTTPIKLVFKNANNI 166 + + + + + +T + L G+ + + L ++ N I Sbjct: 120 -QDNPGRFLLQSGLTAADGGKAPSHHDTFSAAATTYTLADGQ---DSLVVPLSWQ-ENGI 174 Query: 167 LFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGR--IMRHKPQTATNTFGVQEGFIAV 223 +T + Y F + V N+S R + + + P G + Sbjct: 175 TVHKTYTFKRGAYDFTLEQKVENHSDKAWRGNAYQQWVFGQPLPSKGLGQVATFTGAVMS 234 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 D Y I+ S N + W+ + Y+ IP++ + F + Sbjct: 235 YDDDP-----YEKIKLGSKFNTNTETGWVAMIQHYFLGAIIPAQGQP-QAFFTNTNASSG 288 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 A + PG S + T+ ++ G K + P + +D+G+ + I Sbjct: 289 DNFAGVVGASSEVAPGGSTSFTSQIYIGPKIQKDLKAV-----APNLDKTVDYGFLFMIG 343 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +PMF ++++ + ++ N+G AI++TT+ +KLLFF + Y S A M+ + P++ ++E++ Sbjct: 344 QPMFYVINFIHGILHNWGWAIIVTTLLIKLLFFTPSAWAYKSMAKMRRLGPEMQRIKERY 403 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q AM++LYK +NP +GC P+LLQIP F A Y V+ S+E+RHAP+ GWI+ Sbjct: 404 GDD-RQAASMAMMKLYKDEKVNPASGCLPMLLQIPFFIAFYWVLVESVELRHAPWLGWIQ 462 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+A DP I PII + MF+Q K++PPP D QA ++ + Sbjct: 463 DLSAMDPYYIL-------------------PIINAALMFLQQKLNPPPPDPTQAKVMMML 503 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+VF FP+GL++YW+ SN IVQQ ++ K +G Sbjct: 504 PLVFGIMFMWFPSGLVLYWTVSNAFGIVQQYIMNKRYGER 543 >gi|301064543|ref|ZP_07204939.1| putative membrane protein [delta proteobacterium NaphS2] gi|300441291|gb|EFK05660.1| putative membrane protein [delta proteobacterium NaphS2] Length = 551 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 159/569 (27%), Positives = 267/569 (46%), Gaps = 30/569 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE--RKNIQTVKQPNQVDNSYAAV-- 56 M+ +A ALS +I+ W F+ +E E +++Q + + V S AA Sbjct: 1 MD--KKTILAFALSFVILVGWSLFFAPQPKKEPPKESSPESVQPEHEKSSVTISPAAPSK 58 Query: 57 --LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 ++ R+++ P + G L+ Y V+ SP V +++ Sbjct: 59 TIAAVEQPTVQQEEKRIKIDTPLYSAVFSNVGPTIKSFKLKKYRQTVNPESPFVEMVTLE 118 Query: 115 NTKNAYFA---ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 Y + ++ NI L G + I N N I +T Sbjct: 119 EGMGDYLTILFDDSIDASTQNIAFSADKESLTLQQG---SEPATIVFRGTNRNGIAITQT 175 Query: 172 ISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 + Y + T N + + R + R P + GF L D L Sbjct: 176 YRFHPDRYGIDLAVTAVNPNTVTVNGVFRTTL-RALPPKDKGGYYAYVGFALFL-DDKLD 233 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 E + D + + W+ D Y+ S +P K+LS G ++ + Sbjct: 234 ELEVED--PGETKSATGTIGWICYEDNYFISAVVPEVPAKGSFTGKHLSSG--VFEGVYL 289 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 +++ P T+ L+ G ++ + + K+L + I++GW IAKP+ ++ Sbjct: 290 PAAVSLPPSAQATSEYELYLGPRDLSILKKFGKNL-----DKAINFGWTDIIAKPLLYVL 344 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 +F + N+G++I+L T+ VK+LF+PL K Y S M+ +QP++ +LREK+K Q Sbjct: 345 KFFDAYLHNYGVSIILLTILVKILFWPLTHKSYKSMKEMQKLQPRMAKLREKYKGDK-QK 403 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 L + M+ LYKT+ +NP+ GC P+++QIPVFFA+++V+ +E+RHAPF WI DL+A D Sbjct: 404 LNQEMMALYKTYKVNPMGGCLPMVVQIPVFFALFRVLGACIELRHAPFIFWINDLSAPD- 462 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 +F +PF P + + + ++M SMFIQ KM+P P D QA I+ ++PV+F F Sbjct: 463 -RLFHFSFQIPFMAPPY-GIPVLTLLMGASMFIQQKMTPSPGDPAQAKIMMFLPVIFTFM 520 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +FP+GL++YW +N++SI QQ I K Sbjct: 521 FINFPSGLVLYWLVNNLLSIGQQYRIYKK 549 >gi|319778792|ref|YP_004129705.1| Inner membrane protein translocase component YidC, long form [Taylorella equigenitalis MCE9] gi|317108816|gb|ADU91562.1| Inner membrane protein translocase component YidC, long form [Taylorella equigenitalis MCE9] Length = 549 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 165/564 (29%), Positives = 264/564 (46%), Gaps = 38/564 (6%) Query: 5 WNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNER-KNIQTVKQPNQVDNSYAAVLIDDR 61 + + + W N+ Y P E+ ++ T P+ NS A I Sbjct: 4 KRTLLWMIFVFSLFTLWSNWKSYNNPAPLNTVTEQNQSPATPSVPSADTNSPATAPIKTN 63 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + S ++ +K+ L + + GAQ +L +H P L K+ + Sbjct: 64 SVVSEDSEKITVKSDVLNLTFDTVGAQLIKADLLKHHSAEDKALPTTLL---DFKKDIFT 120 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISL-DEHYL 179 + +S N + P T + +S ++F+ + I RT +L Y Sbjct: 121 VQSGVLSQTPNKQFPIQTTQFKYVSTDENLSGDKKDIIFEAESDGIKVRRTYTLNKGSYD 180 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 D ++N S + I +I R KP+ +T+ G+ + + + DI Sbjct: 181 ITFKDEISNLSSEAISPIHYVQITRDGAKPKDSTSMTNSYWGYAVYSEKEKFEKVPFKDI 240 Query: 238 EKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + S S+ W+ Y+ + ++ K H +F+ G Y A S I Sbjct: 241 DDRSAEYVSKTSDGWISFIQHYFVTAWVLEKGKEHHIEFR--KAGQNLYAASASQVLGAI 298 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 P +++T ++ L+ G ++ + P ++++GW FIAKPMF LMS+ L Sbjct: 299 APQQTVTVSSHLWVGPQDQKALVKLH-----PNLNTVVNYGWLTFIAKPMFALMSWINTL 353 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GN+G I++ TV +KLL +PL+ Y S A MKNI P++ L+E++ Q L AM+ Sbjct: 354 IGNWGWTIVVLTVIIKLLLYPLSATSYKSMARMKNISPRMKLLKEQYGDDK-QKLNAAMM 412 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 QLYKT INPL GC PILLQIP+F +Y+VI S+E+R A + GWI DL+A DP I Sbjct: 413 QLYKTEKINPLGGCLPILLQIPIFLTLYRVILSSVELRGASWIGWITDLSAQDPYYIL-- 470 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 P +M L+MF+QM+M+P P D QA I+ MP+VF + FPA Sbjct: 471 -----------------PTLMILTMFLQMRMNPTPPDPTQAKIMMIMPLVFGAMMFFFPA 513 Query: 537 GLIIYWSWSNVISIVQQAVIMKMH 560 GL++YW+ ++++SI+QQ K Sbjct: 514 GLVLYWTVNSLLSILQQWYNTKRF 537 >gi|289209759|ref|YP_003461825.1| membrane protein insertase, YidC/Oxa1 family [Thioalkalivibrio sp. K90mix] gi|288945390|gb|ADC73089.1| membrane protein insertase, YidC/Oxa1 family [Thioalkalivibrio sp. K90mix] Length = 567 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 150/585 (25%), Positives = 258/585 (44%), Gaps = 56/585 (9%) Query: 1 MERNWNYF---VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ +A L ++ AW Y P E E++ +P V ++ Sbjct: 1 MDNLRPLLWLSLAFVL-FLMWQAWNQDYGTPAQPETA-EQEAEDPDARPEDVPDAPQFED 58 Query: 58 IDDRAQALSMSP----------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 DD A +S + ++ I+ +G +L Y D+ + P+ Sbjct: 59 EDDPRAAADVSEISPIQEPDRRQFTVRTDKHELLIDTRGGTILRADLLQYPRDL-QDDPL 117 Query: 108 VTLLSPSNTKNAYFAELDYV-----STANNIELPNSNTVWNLISG----KILTPTTPIKL 158 V + + Y A+ A P+ + + + T + + Sbjct: 118 VPVRLFDHRVRGYVAQSGLTHDRVNDRAMEGRAPSHHANFEVDGDHFEMAEGDDTLQVPM 177 Query: 159 VFKNANN-ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 + + + I +T + +L ++ V N ++ RH P ++ + Sbjct: 178 RWVSDDGEIEVIKTYTFTRGTHLIEVGYEVRNQGDSTWSGRQYRQL-RHGPTPDRESWWL 236 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE--TSFHSQ 274 A D S +++ + I W+ + Y+ S ++P + + +++ Sbjct: 237 YTFTGAAYFDGSYQRERFESLADDPIQQRL-HGGWVAMIQHYFVSAWVPGDDEVNALYAR 295 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 G SA +T+ PG+S L+ G K + + L E+ + Sbjct: 296 SVPGEVGEEYLIGLHSAEPLTVRPGESGQLQTRLWVGPKLQDELSQIAQGL-----ELTV 350 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+G F F+AKP+F L+ +++VGN+G +I+L T+ +KL FF L+ Y S A M+ + P Sbjct: 351 DYGMFTFLAKPLFWLLDLIHSVVGNWGWSIVLLTILIKLAFFKLSATSYRSMARMRKVAP 410 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 K+ L+E++K Q + +A+++LYK INPL GC PIL+QIPVF A+Y V+ S+E+R Sbjct: 411 KLQALKERYKDDK-QRMNQALMELYKKEKINPLGGCLPILVQIPVFIALYWVLLESVELR 469 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 AP+W WI+DL++ DP I PI+M +SMF+Q K++PPP D Sbjct: 470 QAPWWLWIQDLSSRDPYFIL-------------------PILMGVSMFVQYKLNPPPMDP 510 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q I +P VF + FPAGL++YW +N+ SI QQ I + Sbjct: 511 VQQKIFMALPFVFTIFFAFFPAGLVLYWFTNNLFSIAQQWYITRK 555 >gi|59802471|ref|YP_209183.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae FA 1090] gi|240015755|ref|ZP_04722295.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae FA6140] gi|240112100|ref|ZP_04726590.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae MS11] gi|240114846|ref|ZP_04728908.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae PID18] gi|240124874|ref|ZP_04737760.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae SK-92-679] gi|254492908|ref|ZP_05106079.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae 1291] gi|268598157|ref|ZP_06132324.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae MS11] gi|268600501|ref|ZP_06134668.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID18] gi|268683454|ref|ZP_06150316.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae SK-92-679] gi|293397800|ref|ZP_06642006.1| inner membrane protein oxaA [Neisseria gonorrhoeae F62] gi|75507262|sp|Q5F4W6|OXAA_NEIG1 RecName: Full=Inner membrane protein oxaA gi|59719366|gb|AAW90771.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|226511948|gb|EEH61293.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae 1291] gi|268582288|gb|EEZ46964.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae MS11] gi|268584632|gb|EEZ49308.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID18] gi|268623738|gb|EEZ56138.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae SK-92-679] gi|291611746|gb|EFF40815.1| inner membrane protein oxaA [Neisseria gonorrhoeae F62] Length = 545 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 150/582 (25%), Positives = 245/582 (42%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ P + Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKP--------------VPAPQQAAQKQAATA 44 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 AL+ + + + ++ I+ K L L Y N P V L + Sbjct: 45 SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFV--LFGDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + T ++L N + ++ + + Y Sbjct: 103 YVAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKDSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S S RI+R + + G + + + + +SD Sbjct: 163 LVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR--- 284 ++ + S WLG+ + ++ S +I P S + D R Sbjct: 223 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRSDK 282 Query: 285 -YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y A S I G T L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ ADP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 457 DLSRADPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 539 >gi|330818731|ref|YP_004362436.1| Putative inner membrane protein translocase component YidC [Burkholderia gladioli BSR3] gi|327371124|gb|AEA62480.1| Putative inner membrane protein translocase component YidC [Burkholderia gladioli BSR3] Length = 553 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 145/519 (27%), Positives = 238/519 (45%), Gaps = 45/519 (8%) Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP--IVTLLSPS 114 D ++ + V+ G I+ +G L L+ + P VTL + Sbjct: 68 TAPDSTAPIAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---EGDGKQPDLFVTLFDHT 124 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVFKN--ANNILFE 169 + Y A PN N ++ +G + +KL F++ + Sbjct: 125 -KDHTYLARTGVTGG----NFPNHNDLYTPAAGNPSALAAGQDSMKLSFESQEKGGVKVV 179 Query: 170 RTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDK 227 +T + Y+ + + N + + I+R T F G K Sbjct: 180 KTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMEIVRDSTPVETPLFSHTFLGPAVYTDQK 239 Query: 228 SLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + +SDI+K+ + N W+ + Y+AS +IP + + + + Y+ Sbjct: 240 HFQKITFSDIDKNKAEYISSADNGWVAMVQHYFASAWIPQQGVKRDIYVEKIDP--SLYR 297 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 TI PG+S + LFAG +E + P +++ D+GW IAKP+ Sbjct: 298 VGVKEQVKTIEPGQSADVSARLFAGPEEERVLEGI-----APGLDLVKDYGWVTIIAKPL 352 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + VGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK Sbjct: 353 FWLLQKIHGYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSD 412 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ Sbjct: 413 P-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLS 471 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP I P++M+ SMF+Q +++P P D QA ++ +MP+ Sbjct: 472 QRDPFFIL-------------------PVLMAGSMFLQTRLNPTPPDPVQAKMMMFMPIA 512 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 F FPAGL++Y+ +NV+SI QQ I + G + Sbjct: 513 FSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTIGKKKA 551 >gi|288942814|ref|YP_003445054.1| membrane protein insertase, YidC/Oxa1 family domain-containing [Allochromatium vinosum DSM 180] gi|288898186|gb|ADC64022.1| membrane protein insertase, YidC/Oxa1 family domain containing [Allochromatium vinosum DSM 180] Length = 554 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 149/584 (25%), Positives = 263/584 (45%), Gaps = 45/584 (7%) Query: 1 MERNWNY-FVAIA-LSVIIVYAWQNFYVYPRIEEMNNERKN------IQTVKQPNQVDNS 52 M+ + F+A+A + +I +W Y P + E+ + + + V + Sbjct: 1 MDNQRLFLFLALAAVLFLIYESWMQDYGRPAQLPVAQEQAQGAPGVPVPSANEIPTVSTT 60 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 AV A + ++ L I+ +GA L Y + LL Sbjct: 61 PGAVPDGATLSAALDETPIRVETDVLRLEISPRGATIASAWLLDYAVVPERPDDKFQLLK 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILF 168 P N + + + ++ LP ++ + T + L + N + Sbjct: 121 PV-PPNMFVVQSGLLGEKPDL-LPTHEAIFTSAQSQYALQPGTDRLDVTLEWTNDAGVRV 178 Query: 169 ERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLG 225 ++ + YL + V N + + ++ R + T G + Sbjct: 179 KKIYTFTRGSYLIESRQVVENQTGAPLVARAYNQLQRTELYDPNETRFISTFTGGVYYSP 238 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 ++ + DI K + + ++ W+ + Y+ + ++P + + F + +RY Sbjct: 239 EEKYKKVSLEDIAKGKL-DLTVTDGWIAMMQHYFLAAWVPPR--AVAETFYTNALNGSRY 295 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + ++I G + N LF G K T+ P E+ +D+GW IAKP Sbjct: 296 IIGKYSPPVSIASGATHAFENQLFVGPKLLSTLEDI-----APGLELAVDYGWLTVIAKP 350 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 ++ ++S+ + +VGN+G AI++ T+ +KL F+ L++ Y S A+M+ I P++ L++++ Sbjct: 351 IYWMLSWIHAVVGNWGWAIIVLTILIKLAFYKLSETSYRSMAHMRQITPRLQALKDRYGD 410 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q L +AM++LYKT INPL GC PIL+QIPVF A+Y V+ S+EMR APF W+ +L Sbjct: 411 DK-QRLNQAMMELYKTEKINPLGGCLPILVQIPVFIALYWVLLESVEMRQAPFVLWLNNL 469 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 +A DP I P+IM +SMF+Q K++P P D QA I+ +P Sbjct: 470 SAPDPYFIL-------------------PLIMGVSMFVQQKLNPAPPDPLQAKIMMSLPF 510 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 VF + FP+GL++YW+ +N++SI QQ I + E R Sbjct: 511 VFTVFFAFFPSGLVLYWTVNNLLSIAQQWKITRDLELETAKRRR 554 >gi|240122686|ref|ZP_04735642.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae PID332] gi|240127387|ref|ZP_04740048.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae SK-93-1035] gi|260441339|ref|ZP_05795155.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae DGI2] gi|268681283|ref|ZP_06148145.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID332] gi|268685760|ref|ZP_06152622.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae SK-93-1035] gi|291044698|ref|ZP_06570407.1| inner membrane protein oxaA [Neisseria gonorrhoeae DGI2] gi|268621567|gb|EEZ53967.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID332] gi|268626044|gb|EEZ58444.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae SK-93-1035] gi|291011592|gb|EFE03588.1| inner membrane protein oxaA [Neisseria gonorrhoeae DGI2] Length = 545 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 150/582 (25%), Positives = 245/582 (42%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ P + Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKP--------------VPAPQQAAQKQAATA 44 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 AL+ + + + ++ I+ K L L Y N P V L + Sbjct: 45 SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFV--LFGDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + T ++L N + ++ + + Y Sbjct: 103 YVAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKDSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S S RI+R + + G + + + + +SD Sbjct: 163 LVNVRFDIANGSAQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR--- 284 ++ + S WLG+ + ++ S +I P S + D R Sbjct: 223 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRSDK 282 Query: 285 -YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y A S I G T L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ ADP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 457 DLSRADPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 539 >gi|239998129|ref|ZP_04718053.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae 35/02] gi|268593980|ref|ZP_06128147.1| inner membrane protein oxaA [Neisseria gonorrhoeae 35/02] gi|268547369|gb|EEZ42787.1| inner membrane protein oxaA [Neisseria gonorrhoeae 35/02] Length = 545 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 150/582 (25%), Positives = 245/582 (42%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ P + Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKP--------------VPAPQQAAQKQAATA 44 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 AL+ + + + ++ I+ K L L Y N P V L + Sbjct: 45 SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFV--LFGDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + T ++L N + ++ + + Y Sbjct: 103 YVAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKDSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S S RI+R + + G + + + + +SD Sbjct: 163 LVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYAGPVVYTPEGNFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR--- 284 ++ + S WLG+ + ++ S +I P S + D R Sbjct: 223 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCHIDIKRRSDK 282 Query: 285 -YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y A S I G T L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ ADP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 457 DLSRADPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 539 >gi|194100143|ref|YP_002003283.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae NCCP11945] gi|240013310|ref|ZP_04720223.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae DGI18] gi|240117048|ref|ZP_04731110.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae PID1] gi|240120382|ref|ZP_04733344.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae PID24-1] gi|268602734|ref|ZP_06136901.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID1] gi|254773007|sp|B4RJJ2|OXAA_NEIG2 RecName: Full=Inner membrane protein oxaA gi|193935433|gb|ACF31257.1| Inner membrane protein oxaA [Neisseria gonorrhoeae NCCP11945] gi|268586865|gb|EEZ51541.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID1] Length = 545 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 150/582 (25%), Positives = 245/582 (42%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ P + Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKP--------------VPAPQQAAQKQAATA 44 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 AL+ + + + ++ I+ K L L Y N P V L + Sbjct: 45 SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFV--LFGDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + T ++L N + ++ + + Y Sbjct: 103 YVAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKDSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S S RI+R + + G + + + + +SD Sbjct: 163 LVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR--- 284 ++ + S WLG+ + ++ S +I P S + D R Sbjct: 223 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCHIDIKRRSDK 282 Query: 285 -YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y A S I G T L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ ADP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 457 DLSRADPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 539 >gi|114798266|ref|YP_759144.1| inner membrane protein, 60 kDa [Hyphomonas neptunium ATCC 15444] gi|114738440|gb|ABI76565.1| inner membrane protein, 60 kDa [Hyphomonas neptunium ATCC 15444] Length = 606 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 201/595 (33%), Positives = 303/595 (50%), Gaps = 38/595 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL-IDD 60 + N+ +A+A + V+ +Q F + P + E+ +Q D A +L Sbjct: 4 QEQRNFLIAMAAMIAFVFLYQYFVMEPAQKRYEAEQAVAVAAEQAAVTDTGVAEILGPKS 63 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AL+ RV+ ++ G+I L GA+ DDL+L+ ++ V + + LL P T+ AY Sbjct: 64 LEDALAEDGRVKFDANAVDGTIRLAGARIDDLSLKQFYTTVEREA-EIRLLRPEATEGAY 122 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 F + N + N+VW + G LT TP+ L + + +R IS+D +Y+F Sbjct: 123 FGTYYW--ADGNALVAGRNSVWTQVGGDTLTTATPVTLRLETE-GMTIDREISIDANYMF 179 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHK----------PQTATNTFGVQEGFIAVLGDKSLV 230 DT+TN S G RH P +AT+ G + V D L Sbjct: 180 SFRDTLTNTSGAARTVRAIGSFERHGDWKRFLEITDPASATSGGPAHLGLMGV-ADGELR 238 Query: 231 EQKYSDI--------EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 QKY + E + F + W G++D YW +P + F + S Sbjct: 239 LQKYKPLMQSKKISGESGEGTFFSDEGGWWGLTDMYWMGALVPEQARPFTASVNRASLAR 298 Query: 283 AR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + + I + PG S+T N LFAGAK+F + YEK +PRF IDWGW YF Sbjct: 299 GGPLEVRTEGAAIEVAPGASVTVENGLFAGAKQFEVLQGYEKS-GLPRFVDAIDWGWAYF 357 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP F ++ + +G+FG +I+ TV VKL PL + S A +K +Q + +L E Sbjct: 358 LTKPFFYVLHWLNGYLGSFGWSILAFTVLVKLPLVPLYNASFKSMAKLKKLQEPMKQLNE 417 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 +F P Q Q+ +++LYK NP+ GC PIL IP+F+A+YK + +SLEMRHAP + + Sbjct: 418 RFAADP-QRKQQELMKLYKEEGANPIGGCLPILFTIPIFYALYKTLYVSLEMRHAP-FAY 475 Query: 462 IKDLAAADPTNIFTLFGILPFYLPG----------FMHVGIWPIIMSLSMFIQMKMSPPP 511 +KDL+A DPT I LFG++PF+ + +GI PI+ +M +SPPP Sbjct: 476 LKDLSAPDPTAIGNLFGLIPFWSGADVKSIPIIGIIIGIGILPILYGATMAALQSLSPPP 535 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 DK QA I+ MP+VF+F F AGL++YW WSNV++ +QQ +IM+M+G E L Sbjct: 536 PDKMQARIIMAMPIVFMFVFGGFAAGLVMYWVWSNVLTFIQQYIIMRMNGVETEL 590 >gi|237809901|ref|YP_002894341.1| 60 kDa inner membrane insertion protein [Tolumonas auensis DSM 9187] gi|259515732|sp|C4LDZ4|OXAA_TOLAT RecName: Full=Inner membrane protein oxaA gi|237502162|gb|ACQ94755.1| 60 kDa inner membrane insertion protein [Tolumonas auensis DSM 9187] Length = 549 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 135/583 (23%), Positives = 243/583 (41%), Gaps = 61/583 (10%) Query: 1 MERNWNYFVAIA--LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S ++ +W K + V S + Sbjct: 1 MQPQRNLLLIGLLLVSFMLWQSWMVD----------KAPKTATPATAESSVPASSGGDVP 50 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + + L++ L +++ G + L S+ P V L + Sbjct: 51 NQNDASNAKHALLTLRSDVLELTVDTLGGDIVEAKLLKQTEAQGSDKPFVLL--EKKPQR 108 Query: 119 AYFAELDYVS------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ + A + T + L+ GK + + F +A +F + Sbjct: 109 QYIAQSGLIGRDGVDNQAERPVYTANGTEFALVEGK---DELVVPMTFTDAKGNVFTKRF 165 Query: 173 SLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGD 226 L Y + V N S + G++ + T G + Sbjct: 166 VLKRESYAVGVDYQVKNVSAQPLEIQFYGQLKQTIAAPEGSSTPGMMASAFHGAAYSSAE 225 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG----- 281 + + +SDI ++ + + W G+ Y+ + + + H K +S Sbjct: 226 QRYEKVNFSDIGETKL-DVATQAGWAGMLQHYFVTAWTGKADAQNHIYGKAVSVNADVKD 284 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 TI L+ G K + ++ +D+G+ +F Sbjct: 285 SGEAIIGIKLPLTTIAANSEAVVGTSLWIGPKLQDQMAAV-----AQHLDLTVDYGYLWF 339 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA+P+F L+ + + LVGN+G+AI+L T+ V+ + +PL+K QY S A M+ +QPK+ LRE Sbjct: 340 IAQPLFQLLQFLHGLVGNWGVAIILITMIVRGVMYPLSKAQYTSMAKMRLLQPKLTALRE 399 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + Q + +AM++LYK +NPL GC+P+L+Q+P+F A+Y + S+E+RHAPF W Sbjct: 400 RLGDD-RQKMSQAMMELYKEEKVNPLGGCFPLLIQMPIFIALYWTLMESVELRHAPFALW 458 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL 520 + DL+ DP + P++M +M+ KMSP D Q ++ Sbjct: 459 LTDLSVKDPYYVL-------------------PLLMGATMWYIQKMSPTTVTDPMQQKVM 499 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +MP+VF F FP+GL +YW SN+++I+QQ +I + + Sbjct: 500 QFMPIVFTFMFLWFPSGLTLYWVVSNIVTIIQQTLIFRQLEKK 542 >gi|77920733|ref|YP_358548.1| inner-membrane protein [Pelobacter carbinolicus DSM 2380] gi|77546816|gb|ABA90378.1| protein translocase subunit yidC [Pelobacter carbinolicus DSM 2380] Length = 542 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 154/574 (26%), Positives = 269/574 (46%), Gaps = 46/574 (8%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N N +A+ L V+I + F+V P +N+E ++ V D Sbjct: 2 ENKNVIIALLLMVLIWTGYTTFFVKPAPAPVNDEPAVAESFPAVTPEVVGERVVPSVDHV 61 Query: 63 QALSMSPRVE-----LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A + S + + G + L L+ Y + +S +VTL+ N Sbjct: 62 MAAAASSDIAPRDFVVDTEDFRAVFTNVGGRLKKLELKNYRETLKEDSGLVTLVDADNAL 121 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILT----PTTPIKLVFKNANNILFERTIS 173 + + + +I L + + + LT ++ +N ++ E+ S Sbjct: 122 STF-----GILGQGDIALAENTVYATDVPAEGLTLGSDDKKDLRFTAVLSNGVVVEKVFS 176 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 L+ + Y F + V N I+ S +++ + + G A+ D L Sbjct: 177 LNGKGYDFNLQVRVVNPGDRPIQGSLELLMVQPWSEDREGSRYSFVGP-AIYADDELNTY 235 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 K ++E +I S W DKY+ + +P + + + + S+ Sbjct: 236 KVKELEDGAI-RHDNSGIWTAFEDKYFMTAAVPLRSEQHAFVLEKVGNAVKNI---VSSG 291 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 +++ +S+T L+AG ++ + L + ID+G+F +A+P+ ++ + Sbjct: 292 NLSVGGQQSVTLDYLLYAGPRDLDVLEQVNHGL-----DKAIDFGFFDMLARPLLSVLKF 346 Query: 353 FY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + NL+ N+G+AI+L TVF+K+LF+PL K Y S +M+ +QP++ LREK+K+ + + Sbjct: 347 CHKNLISNYGVAIILLTVFIKVLFWPLTHKSYKSMRDMQKLQPEMQRLREKYKKDK-ERM 405 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + +++LY+ + +NP+ GC P+ QIPVFFA+YKV+ S+ +RH PF WI+DLAA DP Sbjct: 406 NREIMELYRKNRVNPMGGCLPMFAQIPVFFALYKVLLGSIALRHEPFIFWIQDLAAKDPY 465 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 I P+IM ++MF Q KMSP D QA I+ +MPV+F F Sbjct: 466 YIT-------------------PLIMGVTMFFQQKMSPTTMDSQQAKIMLFMPVIFTFMF 506 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 +FP+GL+IYW +NV++I QQ I + G + Sbjct: 507 LNFPSGLVIYWLVNNVLTIAQQWFINREGGQPVK 540 >gi|255066611|ref|ZP_05318466.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sicca ATCC 29256] gi|255049195|gb|EET44659.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sicca ATCC 29256] Length = 548 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 140/575 (24%), Positives = 244/575 (42%), Gaps = 54/575 (9%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 + A+S+ I W++F+ P+ Q A Sbjct: 4 KRFIAFFAISLAIYAGWEHFFPSPKP-----------NPAQQAAQQQQQQTATTAAAEAA 52 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 L+ + + + ++ I+ K + L Y + N P L + + Y A+ Sbjct: 53 LAPATPITVTTDTVKAVIDEKSGDLRQMTLLKYKANGDENKPFT--LFNDSKEYTYVAQS 110 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIV 183 + + N L N + ++L N + ++ + + YL + Sbjct: 111 ELLDAQGNNILKGVNFTAAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYLVNVR 170 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSS 241 +TN S S RI+R + + + + G + + + +SD++ + Sbjct: 171 FDITNTSGKPANLSADYRIVRDRSEPEGQGYFTRSFVGPVVYTPEGKFQKVNFSDLDDDA 230 Query: 242 ISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHARYQAK 288 S WLG+ + ++ S +I P S + D Y Sbjct: 231 KSGKNEAEYARKTQTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDNLYSTS 290 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 S I G + L+AG + I + +L ++ D+G ++ A P+F Sbjct: 291 VSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFASPLFW 345 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 346 LLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDD-R 404 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI DL+ + Sbjct: 405 MAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRS 464 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P+IM+++MF Q ++PPP D QA ++ MP++F Sbjct: 465 DPYYIL-------------------PVIMAVTMFAQTFLNPPPTDPMQAKMMKVMPLIFS 505 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW +N+++I QQ I + + Sbjct: 506 AMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIDKQ 540 >gi|114332119|ref|YP_748341.1| 60 kDa inner membrane insertion protein [Nitrosomonas eutropha C91] gi|122313199|sp|Q0AE56|OXAA_NITEC RecName: Full=Inner membrane protein oxaA gi|114309133|gb|ABI60376.1| protein translocase subunit yidC [Nitrosomonas eutropha C91] Length = 622 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 160/596 (26%), Positives = 266/596 (44%), Gaps = 69/596 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFY-------VYPRIEEMNNERKNIQTVKQPNQVD--- 50 M+ N + I S +++ W + P + N + K + + Sbjct: 1 MD-NKKIVLLIIFSTSLLFLWDAWVKEQEKFNAPPSVVAQANSAAGVTQSKNNDGLPIPG 59 Query: 51 ---------------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 S + L ++ + +I I+ G L L Sbjct: 60 SELTASQTGSDLNGIPSSGDTADSVTPRLLPSGEQIRVVTDKVIAEIDTMGGDLRRLELL 119 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG------KI 149 N P L S ++ Y A+ V LPN TV+ + SG Sbjct: 120 QQPSPEDENVPYSLLHSEAS--RTYVAQSGLVGEG----LPNHKTVYQVESGIRNYELTA 173 Query: 150 LTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208 I+L+ + +T + Y+ I + N S IR +++R Sbjct: 174 GEDKVVIRLLAPETQGVQVIKTYTFHRDSYVIDIGFEIANKSDATIRPFAYFQMLRDDTP 233 Query: 209 TATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIP 265 +T ++ G ++ + + D++K +N W+ + + Y+ + ++P Sbjct: 234 PPAHTMMIRSFLGAAVYTDEEKYQKIPFDDLDKGKTDYPANANNGWIAMLEHYFLTAWLP 293 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 ++T K SD Y A I G+++TTT L+AG +E + Sbjct: 294 PQQTPREYFAKRQSDN--LYTAGVIVPAGVITAGETVTTTMPLYAGPEEQDRLAEL---- 347 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 P E+ +D+GW IAKP+F L+S++++ GN+GIAI+L T+ VKLLFFPL+ Y S Sbjct: 348 -APGLELTVDYGWLTMIAKPLFRLLSFYHSWTGNWGIAIILLTITVKLLFFPLSAAGYRS 406 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A ++ + PK+ +++++K Q + +AM+ YKT INP+ GC+PIL+QIPVF A+Y Sbjct: 407 MAKLRLVTPKLKRIQDQYKGD-RQRMHQAMMDFYKTEKINPMGGCFPILVQIPVFIALYW 465 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I ++E+R+APF WI DL++ DP + P+++ +SMFIQ Sbjct: 466 TILAAVELRYAPFALWITDLSSPDPKYLL-------------------PVLLGISMFIQT 506 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +++P P D QA I+ MPV F FPAGL++Y +N++SI QQ I KM+G Sbjct: 507 RLNPTPTDPIQAKIMQIMPVAFSAIFFFFPAGLVLYSLVNNILSIAQQWKITKMYG 562 >gi|82703889|ref|YP_413455.1| 60 kDa inner membrane insertion protein [Nitrosospira multiformis ATCC 25196] gi|123543756|sp|Q2Y5A8|OXAA_NITMU RecName: Full=Inner membrane protein oxaA gi|82411954|gb|ABB76063.1| protein translocase subunit yidC [Nitrosospira multiformis ATCC 25196] Length = 569 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 157/588 (26%), Positives = 256/588 (43%), Gaps = 63/588 (10%) Query: 1 MERNWN-YFVAIALSVIIVY-AWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ F+ A S++ ++ AWQ YP + + +T + V Sbjct: 1 MDTQRFVLFLIFATSLLFLWDAWQKEQ-YPATQGPKTAVQGTETQANTGTAGTAETPVPG 59 Query: 59 DDRAQA-------------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 D A + L ++ +K ++ I+ G L L Sbjct: 60 DQLASSVPQRGSTAENGAPVRAAGKLESGDKITIKTDMVLAEIDTAGGDIRRLELLHQPS 119 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTP 155 N P L S+ + Y A+ + LP T + G Sbjct: 120 KEDKNKPFALL--ESDPERVYIAQSGLIGEG----LPTHKTRFTAEPGAYELAAGQDKIQ 173 Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 I+L + + + + YL + V N I+ +++R + F Sbjct: 174 IRLSAPEVDGVQVTKIYTFHRGSYLIDVSFEVANQRNAAIQPFSYFQMLRDSRPPVGSFF 233 Query: 215 GV--QEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSF 271 V G ++ + ++S ++K + S + N W+ + +Y+ + ++P + Sbjct: 234 MVPTYTGAALYTEEEKFRKIEFSALDKGNASYPKNADNGWIAMLQQYFLAAWLPKDKLPR 293 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 K L G Y A I PG S T T L+AG +E + P + Sbjct: 294 EYYAKRL--GENEYTAGVIVPVGQIEPGSSATVTVPLYAGPEEQSKLASI-----APGLD 346 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +++D+GW I P+F L+S F++ GN+G+AI+L T+ VKL FFPL+ Y S A ++ Sbjct: 347 LVVDYGWLTVIGAPLFWLLSLFHSWTGNWGVAIILLTMSVKLAFFPLSAAGYRSMAKLRL 406 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + PK+ LRE+ Q + +AM+ YKT INP+ GC PIL+QIPVF ++Y V+ S+ Sbjct: 407 VTPKLQRLREQHGND-RQRMHQAMMDFYKTEKINPMGGCLPILVQIPVFISLYWVLLSSV 465 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+R+A F WI+DL+A DP + P+IM +SMF+Q ++SPP Sbjct: 466 ELRYASFALWIEDLSAPDPYYVL-------------------PVIMGISMFLQQRLSPPA 506 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 D QA ++ MP+ F FPAGL++Y +NV+SI QQ I +M Sbjct: 507 TDPIQARVMQIMPLAFSVFFFFFPAGLVLYSLVNNVLSIAQQWQITRM 554 >gi|254282101|ref|ZP_04957069.1| inner membrane protein, 60 kDa [gamma proteobacterium NOR51-B] gi|219678304|gb|EED34653.1| inner membrane protein, 60 kDa [gamma proteobacterium NOR51-B] Length = 572 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 145/546 (26%), Positives = 250/546 (45%), Gaps = 41/546 (7%) Query: 28 PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGA 87 + T + + + + S + +K +L I+L G Sbjct: 54 QTPAANSGPVPETPTPAVTVEDLPTLTDAVPAPSQDIAADSTLIAVKTETLELVIDLNGG 113 Query: 88 QFDDLNLRGYHLDVS-SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLIS 146 ++ L + + N P + L N + Y A+ V + + I+ P + S Sbjct: 114 DIIEVALPRFPEQIDDPNQPFMLL--EQNDRRTYIAQSGLVGS-DGIDHPQRAHYVSAQS 170 Query: 147 GKILTPTTP--IKLVFK-NANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRI 202 TP P I+L + N++ + + +LD E Y+ + +VTNN + + P ++ Sbjct: 171 EYTATPGQPLSIELAWAGNSSELAITKRFTLDPESYVVDVEYSVTNNRGSRWQAVPFAQL 230 Query: 203 MRHKPQ-----TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257 R T+ G D + + DI W+ + Sbjct: 231 KRDNTPPPNADTSGLGMKPFLGAALTQPDDRFTKFDFGDIADEPFRK-TLPGGWIALMQH 289 Query: 258 YWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317 Y+ S +I + S + + + G F++ + + G + + L+ G K+ Sbjct: 290 YFVSAWIANPNQSHNYSTRQTTSGFNI--VGFTSPALAVDSGNTGSAGYRLYVGPKDQYQ 347 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + ++ +D+GW ++IA+P+F L++ ++VGN+G+AI+L TV VK FF Sbjct: 348 LAELSD-----HLDLTVDYGWLWWIAQPLFWLLTKIQSVVGNWGVAIILLTVLVKGAFFK 402 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 L+ Y S A M+ +QPK+ ++RE++ + Q M++LY+ +NP+ GC PIL+Q+ Sbjct: 403 LSATSYRSMARMRKLQPKMVDIREQYADDKSKQSQM-MMELYRKEKVNPMGGCLPILIQM 461 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 PVF A+Y V+ S+E+RHAPF WIKDL+ DP + P++M Sbjct: 462 PVFIALYWVLMESVELRHAPFVLWIKDLSVMDPYFVL-------------------PLMM 502 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 SMF K++PPP D QA I+ W+PV+F F FPAGL++YW +N++S+ QQ VI Sbjct: 503 GASMFFMQKLNPPPPDPMQAKIMQWLPVIFTFFFLWFPAGLVLYWVVNNLLSMTQQYVIT 562 Query: 558 KMHGAE 563 + E Sbjct: 563 RAIERE 568 >gi|261363929|ref|ZP_05976812.1| membrane protein insertase, YidC/Oxa1 family [Neisseria mucosa ATCC 25996] gi|288567942|gb|EFC89502.1| membrane protein insertase, YidC/Oxa1 family [Neisseria mucosa ATCC 25996] Length = 547 Score = 432 bits (1110), Expect = e-118, Method: Composition-based stats. Identities = 141/577 (24%), Positives = 243/577 (42%), Gaps = 55/577 (9%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 A+S+ I W++F+ P+ A Sbjct: 4 KRLVAFFAISLAIFAGWEHFFPSPKPNPAQQ------------AAQQQQQTAATAAAEAA 51 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 L+ + + + ++ I+ K + L Y + N TL + S + Y A+ Sbjct: 52 LAPATPITVTTDTVKAVIDEKSGDLRQMTLLKYKANGDENKAF-TLFNDS-KEYTYVAQS 109 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIV 183 + + N L N + ++L N + ++ + + YL + Sbjct: 110 ELLDAQGNNILKGVNFTAAQKEYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYLVNVR 169 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSS 241 +TN+S + S RI+R + + G + + + +SD++ + Sbjct: 170 FDITNSSGKPVNLSADYRIVRDHSEPEGQGYFTHSYLGPVVYTPEDKFQKVSFSDLDDDA 229 Query: 242 ISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHARYQAK 288 S WLG+ + ++ S +I P S + D Y Sbjct: 230 KSGKNEAEYARKTQTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDNLYSTS 289 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 S I G + L+AG + I + +L ++ D+G ++ A P+F Sbjct: 290 VSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFASPLFW 344 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 345 LLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDD-R 403 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI DL+ + Sbjct: 404 MAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRS 463 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P+IM+++MF Q ++PPP D QA ++ MP+VF Sbjct: 464 DPYYIL-------------------PVIMAVTMFAQTFLNPPPTDPMQAKMMKVMPLVFS 504 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 FPAGL++YW +N+++I QQ I + + Sbjct: 505 AMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIDKQRA 541 >gi|240079892|ref|ZP_04724435.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae FA19] gi|268596034|ref|ZP_06130201.1| inner membrane protein oxaA [Neisseria gonorrhoeae FA19] gi|268549822|gb|EEZ44841.1| inner membrane protein oxaA [Neisseria gonorrhoeae FA19] Length = 545 Score = 432 bits (1110), Expect = e-118, Method: Composition-based stats. Identities = 150/582 (25%), Positives = 245/582 (42%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ P + Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKP--------------VPAPQQAAQKQAATA 44 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 AL+ + + + ++ I+ K L L Y N P V L + Sbjct: 45 SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFV--LFGDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + T ++L N + ++ + + Y Sbjct: 103 YVAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKDSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S S RI+R + + G + + + + +SD Sbjct: 163 LVNVRFDIANGSAQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR--- 284 ++ + S WLG+ + ++ S +I P S + D R Sbjct: 223 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRSDK 282 Query: 285 -YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y A S I G T L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ ADP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 457 DLSRADPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVVNNLLTISQQWHINRSIEKQRA 539 >gi|167834935|ref|ZP_02461818.1| putative inner membrane protein translocase component YidC [Burkholderia thailandensis MSMB43] Length = 489 Score = 432 bits (1110), Expect = e-118, Method: Composition-based stats. Identities = 146/508 (28%), Positives = 232/508 (45%), Gaps = 44/508 (8%) Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI--VTLLSPSNTKNAY 120 + + V G I+ +G L L P VTL + + Y Sbjct: 8 APAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPDLSVTLFD-NAANHTY 63 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNA--NNILFERTISLDE 176 A + + PN N ++ ++G +KL F++ + +T + Sbjct: 64 LARTGLLGG----DFPNHNDIYAQVAGPTSLSAGQNALKLSFESPVKGGVKVVKTYTFTR 119 Query: 177 -HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKY 234 Y+ + + N + S ++R T F G K + + Sbjct: 120 GSYVIGVDTKIENVGTTPVTPSVYMELVRDNTSVETPMFSHTFLGPAVYTDQKHFQKITF 179 Query: 235 SDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 SDI+K+ + N W+ + Y+AS +IP + + Y+ Sbjct: 180 SDIDKNKADYVPSADNGWIAMVQHYFASAWIPQAGAKRDIYVEKIDP--TLYRVGVKQPV 237 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 I PG+S + LFAG +E + P E++ D+GW IAKP+F L+ Sbjct: 238 AAIAPGQSADVSARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEKI 292 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK P Q + Sbjct: 293 HGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDP-QKMNA 351 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 352 ALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFI 411 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 P++M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 412 L-------------------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFF 452 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++Y+ +NV+SI QQ I + G Sbjct: 453 FPAGLVLYYVVNNVLSIAQQYYITRTLG 480 >gi|241759451|ref|ZP_04757555.1| inner membrane protein, 60 kDa [Neisseria flavescens SK114] gi|241320233|gb|EER56566.1| inner membrane protein, 60 kDa [Neisseria flavescens SK114] Length = 548 Score = 431 bits (1109), Expect = e-118, Method: Composition-based stats. Identities = 143/577 (24%), Positives = 240/577 (41%), Gaps = 54/577 (9%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 A+SV I W++F+ P+ + + A Sbjct: 4 KRLMAFFAISVAIFAGWEHFFPSPKPNPAQQAAQQQTAAAPAKAAAEAALAPASP----- 58 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + + ++ I+ K L L Y + P V L + Y A+ Sbjct: 59 ------ITVTTDTVKAVIDEKSGDLRQLTLLQYKATGDEHKPFV--LFNDGKEYTYVAQS 110 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIV 183 + + N L + + ++L N + ++ + YL I Sbjct: 111 ELLDAQGNNVLKGISFTAPQKQYSLEGDKVEVRLSAPETNGLKIDKVYTFTKGSYLVNIR 170 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDIEKSS 241 +TN++ + S RI+R + + G + + + +SD++ + Sbjct: 171 FDITNSNGQPVNLSADYRIVRDNSEPEGQGYFTRSYVGPVVYTPEGGFQKVSFSDLDDDA 230 Query: 242 ISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHARYQAK 288 S WLG+ + ++ S +I P S S + D Y A Sbjct: 231 KSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKDGQSVCSAGECNIDIKRRNDNLYSAS 290 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 S TI G T L+AG + I + + ++ D+G ++ A P+F Sbjct: 291 VSVPLATIQAGTKAETAINLYAGPQATSVIANIAD-----KLQLAKDYGKVHWFASPLFW 345 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 346 LLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDD-R 404 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 V Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI DL+ Sbjct: 405 MVQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRP 464 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P+IM+++MF Q ++PP D QA ++ MP+VF Sbjct: 465 DPFYIL-------------------PLIMAVTMFAQTYLNPPSTDPMQAKMMKIMPLVFS 505 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 FPAGL++YW +N+++I QQ I + + Sbjct: 506 IMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 542 >gi|167587875|ref|ZP_02380263.1| putative inner membrane protein translocase component YidC [Burkholderia ubonensis Bu] Length = 504 Score = 431 bits (1109), Expect = e-118, Method: Composition-based stats. Identities = 144/503 (28%), Positives = 236/503 (46%), Gaps = 41/503 (8%) Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 + V+ G I+ +G L L+ D +TL + + + Y A Sbjct: 28 QAQLVKFSTDVYDGEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFDHTAS-HTYLARTGL 85 Query: 127 VSTANNIELPNSNTVWNLI---SGKILTPTTPIKLVFKNA--NNILFERTISLDE-HYLF 180 + + PN N V++ + + +KL F++ + +T + Y+ Sbjct: 86 LGG----DFPNHNDVYSQVNAGPTTLSGDQNALKLSFESPVKGGVKVVKTYTFTRGSYVI 141 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEK 239 + + N + + ++R T F G K + +SD++K Sbjct: 142 DVDTKIDNVGTAPVSPTVYMELVRDNTAVETPMFSHTFLGPAVYTDSKHFQKIDFSDLDK 201 Query: 240 SSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + + + N W+ + Y+AS +IP + + A Y+ I P Sbjct: 202 NKANFEKSADNGWVAMVQHYFASAWIPKQGVKRDIYAEKFDP--ALYRVGVKQPVGAIAP 259 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G+S + LFAG +E + P E++ D+GW IAKP+F L+ + VG Sbjct: 260 GQSADVSARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEKIHGFVG 314 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK P Q + A+++L Sbjct: 315 NWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDP-QKMNAALMEL 373 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 374 YKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFFIL---- 429 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL Sbjct: 430 ---------------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGL 474 Query: 539 IIYWSWSNVISIVQQAVIMKMHG 561 ++Y+ +NV+SI QQ I + G Sbjct: 475 VLYYVVNNVLSIAQQYYITRKLG 497 >gi|257095987|ref|YP_003169628.1| 60 kDa inner membrane insertion protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048511|gb|ACV37699.1| 60 kDa inner membrane insertion protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 560 Score = 431 bits (1109), Expect = e-118, Method: Composition-based stats. Identities = 142/559 (25%), Positives = 237/559 (42%), Gaps = 44/559 (7%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ-ALSMSPRVELK 74 ++ AWQ Y P+ Q + ++ VL D A A + +K Sbjct: 18 MLWDAWQK-YNQPKPAATAAVSTPQAPAPQLSTNLHAPLPVLPDTAAVRAPDKAETFTVK 76 Query: 75 NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE 134 + I+ G L L Y + K+ Y A+ + Sbjct: 77 TDLFVAHISRIGGDIVRLELNDYKDSTNKQKDFALF----EAKHQYVAQSGLIGEG---- 128 Query: 135 LPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNN 189 LPN T ++ ++G T ++L + +T + YL + + N Sbjct: 129 LPNHKTSFSAVAGSAELGADAKTVVLRLEAPAGGGLKVAKTYTFTRGSYLIDVAHEIDNG 188 Query: 190 SIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH- 246 S ++ ++ R P ++ G + ++DIEK Sbjct: 189 SDKEVLAHAYYQLQRDTKAPDGESSMVSTYTGPAVYTNQDKYQKVDFADIEKGKAKFATR 248 Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG-HARYQAKFSANEITILPGKSITTT 305 + W+ + Y+ + +IP+ + L G + PG +T + Sbjct: 249 ADDGWIAMVQHYFVAAWIPATGLPREFYMRKLEGGVNPAVAVGVIVPAPVAAPGAKVTFS 308 Query: 306 NFLFAGAKEFPTIHHYEK-----DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 ++AG + T+ K + +++D+GW +A P+F + + +VGN+ Sbjct: 309 VPVYAGPQIQATLEQLAKPEADGGIGAQGLPLVVDYGWLTIVAAPIFWCLEAIHTVVGNW 368 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+L T+ +KLLFFPL+ Y S A M+ + P++ L+E++ Q L + M+ LYK Sbjct: 369 GWAIVLLTIGIKLLFFPLSAASYKSMAKMRTVTPRLMALKERYGDD-RQKLNQEMMALYK 427 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 INPL GC PI +QIPVF A+Y + ++E+R AP+ WI DL+A DP + Sbjct: 428 REKINPLGGCLPIAVQIPVFIALYWALLGAVEIRDAPWILWITDLSAQDPYYVL------ 481 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 P+IM ++M IQ K++P P D QA ++ MP +F FPAGL++ Sbjct: 482 -------------PVIMVVTMLIQTKLNPTPPDPIQAKVMMMMPFIFGAMFFFFPAGLVL 528 Query: 541 YWSWSNVISIVQQAVIMKM 559 YW +NV+SI QQ I +M Sbjct: 529 YWVVNNVLSIAQQWQITRM 547 >gi|262273127|ref|ZP_06050944.1| OxaI/YidC membrane insertion protein [Grimontia hollisae CIP 101886] gi|262222883|gb|EEY74191.1| OxaI/YidC membrane insertion protein [Grimontia hollisae CIP 101886] Length = 522 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 137/543 (25%), Positives = 243/543 (44%), Gaps = 41/543 (7%) Query: 30 IEEMNNERKNIQTVKQPNQVDNSYAAV--LIDDRAQALSMSPRVELKNPSLIGSINLKGA 87 E N + Q V Q Q A Q + + L++ L +++ +G Sbjct: 6 WTEATNPQPQGQGVTQQAQHSGDVPASSDASQPLTQDAVSNKLITLQSDVLTLTVDTQGG 65 Query: 88 QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147 L Y + S++ V L + + + A+ + A+ I+ N + Sbjct: 66 DIIHAELNQYDAEFDSDNKFVLL--KNQPDHVFVAQSGLIG-ADGIDTLNGRAKFTANGT 122 Query: 148 KIL----TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRI 202 + + L + + I + +T L +Y + T+ N S + ++ Sbjct: 123 DFVMADGQDELRVPLTLE-KDGITYTKTFVLKRNNYAVDVDYTIDNQSGKEANVQMYAQL 181 Query: 203 MRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWAS 261 ++ + T G + D + + D++ +++ W G+ Y+ + Sbjct: 182 KQNLLDDGGSLTMPTYRGGVYSADDAKYEKYSFDDMKDRNLNLTIAEQGWAGMMQHYFVA 241 Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 +IP + + + S+G ++ T+ G + L+ G K + Sbjct: 242 AWIPHSDGEANLYTR-TSNGQGFIGVRY--PTTTVAAGSTAQLDATLWVGPKLQDQMEQ- 297 Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 P + +D+GW +FIA P+ L+S VGN+G+AI++ T V+ + +PL K Sbjct: 298 ----TAPNLNLTVDYGWLWFIASPLHWLLSTIQGFVGNWGVAIIILTFIVRGVMYPLTKA 353 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 QY S A M+ +QPK+ E+RE+ Q + + M++LYK +NPL GC P+LLQ+P+F Sbjct: 354 QYTSMAKMRMLQPKLQEMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPLLLQMPIFI 412 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A+Y + S+E+RHAPF WI+DL+A DP + P++M SM Sbjct: 413 ALYWALMESVELRHAPFMLWIQDLSAPDPFYVL-------------------PLLMGASM 453 Query: 502 FIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 F+ KMSP D Q I+N+MPV+F FPAGL++YW SN+++++QQ +I + Sbjct: 454 FLIQKMSPSTVTDPMQQKIMNFMPVMFTVFFLWFPAGLVLYWLVSNIVTLLQQTLIYRAL 513 Query: 561 GAE 563 + Sbjct: 514 EKK 516 >gi|153873748|ref|ZP_02002226.1| 60Kd inner membrane protein [Beggiatoa sp. PS] gi|152069784|gb|EDN67772.1| 60Kd inner membrane protein [Beggiatoa sp. PS] Length = 495 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 142/504 (28%), Positives = 234/504 (46%), Gaps = 39/504 (7%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 LS R+ ++ I+ G ++L Y + L++ N + A+ Sbjct: 12 LSSDSRLYVETDVFKLEIDTSGGDIRRVDLLQYPVAADKPDEPFRLMN-EELPNLFVAQS 70 Query: 125 DYVSTANNIE----LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYL 179 + N + + + L G + IKL ++N I + + Y+ Sbjct: 71 GLLPAQNAPTHLALYQSEQSSYRLEPGN---DSLDIKLHWQNDKGIKVTKIYTFHRGSYV 127 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQEGFIAVLGDKSLVEQKYSDIE 238 + V N S++ G+ R + + F G + + + DIE Sbjct: 128 IDVKYLVDNQSVEPWAGQLYGQFQRTQADLGGSRFIYTYMGGAISSPETLYEKIPFDDIE 187 Query: 239 KSSISNFHE---SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 SS + + + W+ + Y+ S ++P E K L DG+ RY F + Sbjct: 188 DSSFNQENRPAWAEGWIAMLQHYFVSAWVPKPEQIHKYYTKMLKDGN-RYVLGFYGPKQV 246 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG LF G K + P ++ +D+GW +FIA+P+F ++ + ++ Sbjct: 247 VAPGTQEIFNIALFVGPKLQNKLLEL-----APGLDLTVDYGWLWFIAQPLFWVLDWLHD 301 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 GN+G +I+L T+ +KL FF L+ Y S ANM+ +QP++ L+E+F + L +AM Sbjct: 302 WTGNWGWSIILLTIMIKLAFFHLSATSYKSMANMRRLQPRMITLKERFGDDKTK-LNQAM 360 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK INPL GC PIL+QIPVF A+Y V+ S+E+R A F WIKDL++ DP + Sbjct: 361 MELYKKEKINPLGGCLPILVQIPVFIALYWVLLESVELRQADFMWWIKDLSSPDPFFVL- 419 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 P+IM +M +Q ++P P D Q ++ +P+VF + FP Sbjct: 420 ------------------PLIMGATMLVQHFLNPAPIDPIQQKMMMMLPIVFTVFFAFFP 461 Query: 536 AGLIIYWSWSNVISIVQQAVIMKM 559 AGL++YW +NV+SI QQ VI K Sbjct: 462 AGLVLYWVANNVLSITQQWVITKK 485 >gi|304313414|ref|YP_003813012.1| Preprotein translocase subunit [gamma proteobacterium HdN1] gi|301799147|emb|CBL47390.1| Preprotein translocase subunit [gamma proteobacterium HdN1] Length = 568 Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 140/590 (23%), Positives = 249/590 (42%), Gaps = 54/590 (9%) Query: 1 MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA---- 54 M+ + + +S ++Y W Y + + + + S Sbjct: 1 MDWQRTLLIGLLAIVSYAMIYTWNQDYGSKQHAASETKLPQSYSQGDTPVITESPKGSED 60 Query: 55 ------------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 L+ D A + ++ L I+ G + L+ Y + + Sbjct: 61 LPSVTNSEKQSLPALVSDAQSAKKAGGLIRVETDVLSVEISTLGGDVVSVRLKAYPISIE 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIKLVF 160 +++L+ + Y A+ + + + + L F Sbjct: 121 DKGTPISILA-ETAQTTYVAQSGLAGINGPDSNAAGRPQYTTDQTEYELKGDHLVVPLHF 179 Query: 161 KNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFG 215 + N + +T Y+ K V N S + +I R T FG Sbjct: 180 VDENGVKVTKTFEFAKGSYVIKNRYDVHNTSSQPWTAAFFAQIKRDNSPDPGVQHTTGFG 239 Query: 216 VQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + G +K ++K+ + K+ + + W+ I Y+ + +IP + + Sbjct: 240 LPTFLGVAYWSPEKPYNKEKFDALVKTPLDLKGVTGGWMAIIQHYFLAAWIPDQNQQYDY 299 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + A+ + +T+ PG S L+ G K T+ +++ Sbjct: 300 STAAVKGNT---IARIVGHSVTVAPGASQDYQASLYVGPKIQKTLEALVPG---KGLDLV 353 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G +FI+K +F L+S F+ L N+G++I+L TV +K LFF + Y S A M+ +Q Sbjct: 354 VDYGPLFFISKILFWLLSTFHALTANWGVSIILLTVTIKALFFYPSAISYRSMAKMRTVQ 413 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P + LRE++ Q L + M++LY+ + INPL GC PIL+Q+PVF A+Y + S+E+ Sbjct: 414 PALLRLREQYADD-RQKLSQEMMKLYRDNKINPLGGCLPILIQMPVFLALYWALLESVEL 472 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R APF+GW+ DL+ DP I P+IM +M+IQ ++P P D Sbjct: 473 RQAPFFGWLTDLSVMDPYFIL-------------------PLIMGGTMYIQTALNPAPPD 513 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 QA ++ +MP++F FPAGL++YW +N +SI+QQ +I + AE Sbjct: 514 PMQAKLMKFMPIIFTVMFLWFPAGLVVYWITNNSLSILQQWIITRKIEAE 563 >gi|134096616|ref|YP_001101691.1| preprotein translocase membrane subunit [Herminiimonas arsenicoxydans] gi|166975870|sp|A4GAN3|OXAA_HERAR RecName: Full=Inner membrane protein oxaA gi|133740519|emb|CAL63570.1| Inner membrane protein OxaA [Herminiimonas arsenicoxydans] Length = 569 Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 158/586 (26%), Positives = 261/586 (44%), Gaps = 46/586 (7%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEM-----------------NNERKNIQTVKQPN 47 + + S ++ W N+ Y + NN K Sbjct: 4 KRTVLWVIFSFSLLMLWDNYNRYTGKPSIFFDSTTTQQAAAPAATGNNAAKTADAPTAAT 63 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 S A A S + + + I+ G + L L +H S Sbjct: 64 TAATSGANTPGVPDGAAAVKSEVITITTDLMKIGIDTAGGEVRHLELLKHHESGDE-SKN 122 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG-KILTPTTPIKLVFKNAN-N 165 V L N ++ Y + + A PN +++ + G + L ++LV ++ Sbjct: 123 VVLFD-ENGQHTYLGQTGLIGGA----YPNHKSMFAAVPGPRTLDSANQVQLVLQSEQQG 177 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV---QEGFI 221 + +T + Y I V NN+ I S +++ + + G Sbjct: 178 VKLIKTFTFKRGEYKVDIKHDVVNNTSTAITPSLYLQLVHDGSALGGGSMFMASAFTGPA 237 Query: 222 AVLGDKSLVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + IEK + + W+ + Y+ S F+P T K L+ Sbjct: 238 IYTEADKFQKVTFESIEKGKAEHAMKGESGWIALVQHYFVSAFVPPANTPREYFTKKLAT 297 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y T+ PG + + +++G +E + P FE++ D+GW Sbjct: 298 N--LYAVGTILPMGTVAPGATASMDTTMYSGPQESKRLEAV-----APGFELVKDYGWLT 350 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 IAKP+F LM + ++GN+G I++ T+ +KL FFPL+ Y S A MK + PK+ ++R Sbjct: 351 IIAKPIFWLMMQIHQILGNWGWTIIVLTIVIKLAFFPLSAAGYRSMAKMKLVTPKMTDIR 410 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 ++K PQ + AM++LYK INP+ GC+P+L+QIPVF ++Y V+ S+E+R+A W Sbjct: 411 TRYKG-EPQKMNAAMMELYKKEKINPIGGCFPMLVQIPVFISLYWVLLASVEIRNAS-WL 468 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DLAA D +F + I F+L +GI PI+M++SMFIQ K++P P D QA ++ Sbjct: 469 WIHDLAAPD--ILFGSYHIGTFHLT----IGILPILMAISMFIQTKLNPTPPDPIQAKVM 522 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM-KMHGAEIG 565 +MP+ F FPAGL++YW +N++SI QQ I K+ G + Sbjct: 523 MFMPIAFSVMFFFFPAGLVLYWVVNNILSIAQQWFINEKLLGGKAK 568 >gi|225077258|ref|ZP_03720457.1| hypothetical protein NEIFLAOT_02313 [Neisseria flavescens NRL30031/H210] gi|224951402|gb|EEG32611.1| hypothetical protein NEIFLAOT_02313 [Neisseria flavescens NRL30031/H210] Length = 548 Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 140/575 (24%), Positives = 238/575 (41%), Gaps = 54/575 (9%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 A+SV I W++F+ P+ + + A Sbjct: 4 KRLMAFFAISVAIFAGWEHFFPSPKPNPAQQAAQQQTAAAPAKAAAEAALAPASP----- 58 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + + ++ I+ K L L Y + P V L + + Y A+ Sbjct: 59 ------ITVTTDTVKAVIDEKSGDLRQLTLLQYKATGDEHKPFV--LFNDSKEYTYVAQS 110 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIV 183 + + N L + ++L N + ++ + YL + Sbjct: 111 ELLDAQGNNILKGIGFSAPQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKGSYLVNVR 170 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDIEKSS 241 +TN++ + S RI+R + + G + + + +SD++ + Sbjct: 171 FDITNSNGQPVNLSADYRIVRDHSEPEGQGYFTRSYVGPVVYTPEGDFQKVSFSDLDDDA 230 Query: 242 ISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHARYQAK 288 S WLG+ + ++ S +I P S + + D Y A Sbjct: 231 KSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCAAGECSIDIKRRNDNLYSAS 290 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 S I G T L+AG + I + + ++ D+G ++ A P+F Sbjct: 291 VSVPLAAIPAGAKAETAINLYAGPQTTSVIANIAD-----KLQLAKDYGKVHWFASPLFW 345 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 346 LLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDD-R 404 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI DL+ Sbjct: 405 MAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRP 464 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P+IM+ +MF Q ++PPP D QA ++ MP+VF Sbjct: 465 DPFYIL-------------------PLIMAATMFAQTFLNPPPTDPMQAKMMKIMPLVFS 505 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW +N+++I QQ I + + Sbjct: 506 VMFFFFPAGLVLYWVVNNLLTITQQWHINRSIEKQ 540 >gi|296314151|ref|ZP_06864092.1| membrane protein insertase, YidC/Oxa1 family [Neisseria polysaccharea ATCC 43768] gi|296839184|gb|EFH23122.1| membrane protein insertase, YidC/Oxa1 family [Neisseria polysaccharea ATCC 43768] Length = 545 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 146/582 (25%), Positives = 245/582 (42%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ + Q V + + A Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP--- 55 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + ++ I+ K L L Y + + N P L + + Sbjct: 56 -----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKANGNENKPFS--LFDDSKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L N + ++L N + ++ + + Y Sbjct: 103 YVAQSELLDAQGNNILKGVNFTAAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + +TN S S RI+R Q + + G + + + +SD Sbjct: 163 LVNVRFDITNTSGKPANLSADYRIVRDHSQPEGQGYFTRSYLGPVVYTPEDKFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHA 283 ++ + S WLG+ + ++ S +I P S + D Sbjct: 223 LDDDAKSGKNEAEYARKTQTGWLGMIEHHFMSAWILQPKGGQSVCAAGDCRIDIKRRNDN 282 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y S I G + L+AG + I + + ++ D+G ++ A Sbjct: 283 LYSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIAD-----KLQLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ ADP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 457 DLSRADPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P++F FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLIFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 539 >gi|325267553|ref|ZP_08134205.1| inner membrane protein OxaA [Kingella denitrificans ATCC 33394] gi|324980903|gb|EGC16563.1| inner membrane protein OxaA [Kingella denitrificans ATCC 33394] Length = 556 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 140/596 (23%), Positives = 258/596 (43%), Gaps = 63/596 (10%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 F+A ALS++I++ + Y P QPN + A A Sbjct: 4 KRLFIATALSMLILWGYGQMYPSP----------------QPNTAATATAQQAQVQAASP 47 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 L + + + ++ I+ K + L Y+ V L Y A+ Sbjct: 48 LGATSPITVNTDTVQAVIDEKSGDLRGMTLNQYNSAADEQQKFVLL--ADGKPLTYIAQS 105 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIV 183 + V L + + T +KL + AN + ++ + YL + Sbjct: 106 ELVDANGKNWLEGLTFSSAQKNYTLSGDTLEVKLSAQAANGVNIDKVYTFRKNSYLVNVR 165 Query: 184 DTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLGD-KSLVEQKYSDIEKS 240 V N I+ +++R KP+ G + D + KYSD++ Sbjct: 166 FDVKNTGSAPIQVGTNYQVVRDNSKPEGEGWFMSSYNGPVVYTPDSDEFQKVKYSDLDDD 225 Query: 241 -------SISNFHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHARYQA 287 + + ++G+ Y+ S +I P + ++ + + Y + Sbjct: 226 FQTGKDTAEYQRKATGGYVGMIQHYFVSAWIMQPQEGSNICEKAACTVNMKKRSDNLYSS 285 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + G S + L+AG + + P+FE+ D+G + A P+F Sbjct: 286 GVNVAPVQVAAGSSQSFGAQLYAGPQITSILKTVS-----PKFELTKDYGRVHIFAAPLF 340 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+++ ++L+ N+G AI++ T+ VK + +PL K Y S A M+ + PK++ L++++ Sbjct: 341 ALLNWLHSLINNWGWAIIVLTIIVKAILYPLNNKAYRSMAKMRTVAPKMEALKKQYGDDK 400 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 LQ+AM++LY+ INPL GC P+L+Q+P+F +Y +I +S+E+R AP+ GWI DL+ Sbjct: 401 -MGLQQAMMKLYRDEKINPLGGCLPMLVQMPIFIGLYWMIFLSVELRQAPWLGWITDLSR 459 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I PI+M+ +M+ Q ++PPP+D QA ++ MP++F Sbjct: 460 PDPFFIL-------------------PILMAATMWFQTTLNPPPSDPTQAQMMKIMPLMF 500 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK---MHGAEIGLIDRLRSTFSKNYNS 580 FPAGL++Y+ +N+++I QQ I + E ++D+ + Sbjct: 501 SVMFFFFPAGLVLYYVVNNLLTIAQQWHINRQSEKLATEPQVLDKEPAPGKGKGKK 556 >gi|121611909|ref|YP_999716.1| 60 kDa inner membrane insertion protein [Verminephrobacter eiseniae EF01-2] gi|121556549|gb|ABM60698.1| protein translocase subunit yidC [Verminephrobacter eiseniae EF01-2] Length = 567 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 134/590 (22%), Positives = 240/590 (40%), Gaps = 61/590 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY----------------PRIEEMNNERKNIQTVK 44 M + + ++ W + V+ + V Sbjct: 1 MNDIRRSVLWVIFGFSMILLWDKWQVHNGNRALFFPAPAPTAPAASAGARPASADAAHVP 60 Query: 45 QPNQVDNSYA----AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 P + A + A RV+++ + + +G L + Sbjct: 61 APAAGASPDAVPGQPAVSGQPAAVPVARERVQVQTDLYRLTFDSQGGSLTHAELLEHADM 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG----KILTPTTPI 156 LL + + Y A+ + + P T + G I Sbjct: 121 ADKTRRF--LLLDESAQRVYVAQTGLIGGS----FPTHKTPMTALPGPRELAEGANELAI 174 Query: 157 KLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNT 213 + + + +T +L Y + V N + +++R KP ++ Sbjct: 175 RFESPSQGGLKLVKTWTLRRGSYAIAVRHEVVNTGSATVSPQLYLQLVRDGNKPPGESSF 234 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFH 272 + G K + ++ DIE + E+ + ++ + Y+A+ ++ + Sbjct: 235 YSTFTGPAVYTDAKKYQKIEFKDIENDKVDIPKEAPDGYVAMVQHYFATAWLLADGVQRQ 294 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + + Y +I PG S T LFAG + + P E+ Sbjct: 295 PFTRKVDTN--LYSVGMLTPLGSIAPGASRTLDARLFAGPQVETMLETLS-----PGLEL 347 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + D+GW +AKP++ L+ + L+ N+G +I+ + +K+ F+ L K Y S A MK I Sbjct: 348 VKDYGWLTILAKPLYWLLEQLHKLLRNWGWSIVGLVLLLKIAFYWLNAKAYASMAKMKAI 407 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PKI E+RE+ K PQ +Q+ M+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+E Sbjct: 408 NPKIMEMRERLK-DKPQQMQQEMMRIYREEKVNPMGGCFPIVIQIPVFIALYWVLLSSVE 466 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MR+AP+ GWI DL+ DP I P++M+ S +Q ++P P Sbjct: 467 MRNAPWIGWIHDLSTPDPLFIL-------------------PLLMTASSLLQTALNPAPP 507 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 D QA ++ +MP++F FPAGL++YW +N++SI QQ +I G Sbjct: 508 DPMQAKMMWFMPLIFSVMFFFFPAGLVLYWLTNNILSIAQQWIINTRMGV 557 >gi|319639364|ref|ZP_07994115.1| inner membrane protein oxaA [Neisseria mucosa C102] gi|317399548|gb|EFV80218.1| inner membrane protein oxaA [Neisseria mucosa C102] Length = 548 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 138/577 (23%), Positives = 235/577 (40%), Gaps = 54/577 (9%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 A+SV I W++F+ P+ + + A Sbjct: 4 KRLMAFFAISVAIFAGWEHFFPSPKPNPAQQAAQQQTAAAPAKAAAEAALAPASP----- 58 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + + ++ I+ K L L Y + P V L + Y A+ Sbjct: 59 ------ITVTTDTVKAVIDEKSGDLRQLTLLQYKATGDEHKPFV--LFNDGKEYTYVAQS 110 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIV 183 + + N L + + ++L N + ++ + YL + Sbjct: 111 ELLDAQGNNVLKGISFSAPQKQYSLEGDKVEVRLSAPETNGLKIDKVYTFTKGSYLVNVR 170 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDIEKSS 241 +TN+ + S RI+R + + G + + + +SD++ + Sbjct: 171 FDITNSKGQPVNLSADYRIVRDHSEPEGQGYFTRSYVGPVVYSPEGGFQKVSFSDLDDDA 230 Query: 242 ISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHARYQAK 288 S WLG+ + ++ S +I P S + D Y A Sbjct: 231 KSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKDGQSVCAAGDCRIDIKRRNDNLYSAS 290 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 S I G T L+AG + I + + ++ D+G ++ A P+F Sbjct: 291 VSVPLAAIQAGAKAETAINLYAGPQTTSVIANIAD-----KLQLAKDYGKVHWFASPLFW 345 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 346 LLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDD-R 404 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI DL+ Sbjct: 405 MAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRP 464 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P+IM+ +MF Q ++PP D QA ++ MP++F Sbjct: 465 DPFYIL-------------------PLIMAATMFAQTYLNPPSTDPMQAKMMKVMPLIFS 505 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 FPAGL++YW +N+++I QQ I + + Sbjct: 506 IMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 542 >gi|146328851|ref|YP_001209838.1| preprotein translocase subunit YidC [Dichelobacter nodosus VCS1703A] gi|146232321|gb|ABQ13299.1| preprotein translocase subunit YidC [Dichelobacter nodosus VCS1703A] Length = 544 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 149/574 (25%), Positives = 260/574 (45%), Gaps = 45/574 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-RKNIQTVKQPNQVDNSYAAVLID 59 M+ N + + + WQ + V R E++ QTVK+ +D + Sbjct: 1 MKGNLRVVLYTLAAGLFFILWQRWQVANRPVEVSPTLPVASQTVKKTETLDQQPPISASE 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 RV +K L + + +GA + L Y + + SP+ L + + ++ Sbjct: 61 TSEAP----DRVRVKTDVLDIAFSTQGASIVEAKLLNYAFTIDNKSPLTLLHAENPSRMV 116 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTT----PIKLVFKNANNILFERTISLD 175 + + VS + PN + W + + P + +++ + + F +T + Sbjct: 117 F--QSGLVSQSGTTA-PNHFSQWKSAQKEYVLPDDAEHISVPFTWEDEHGVRFTKTFTFH 173 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIM--RHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 Y F+I +TV N S + +I G + + + Sbjct: 174 RGTYRFEIEETVENQSERPWQGFAYRQIAFGEAAKMGGLGQVATFTGAVTSSEENRYNKI 233 Query: 233 KYSDIE--KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + DI K + N W+ + Y+ + +P +Y + + Sbjct: 234 ELKDIASAKKAKLNEVTQTGWVAMMQHYFLAAVVPQSGVENRLYTQY---DNGDHIVGTH 290 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 E+TI P + + + G K + P + ID+G+ + I++ MF +M Sbjct: 291 DKEVTIAPRDTHHFKSTGYIGPKISKNLSAI-----APYLDKTIDYGYLFMISQLMFHVM 345 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++ Y ++GN+G AI++ T+ +K LFF + Y S A M+ +QP+I+ L+ ++ + Q Sbjct: 346 TFIYTVIGNWGGAIIVMTLLIKCLFFVPSAWAYKSMAKMRALQPEINRLKAQYGEDK-QA 404 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 +AM+QLY+ +NP +GC P+LLQIP F A Y V++ S+E+RHAP+ GWI+DL++ DP Sbjct: 405 FSQAMMQLYRDRKVNPASGCLPMLLQIPFFIAFYWVLAESVELRHAPWIGWIQDLSSMDP 464 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I PII + MF+Q K++PPP D QA ++ MP+VF F Sbjct: 465 LYIL-------------------PIINAALMFLQQKLNPPPPDPTQAKVMMMMPLVFGFM 505 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 FP+GL++YW+ SN SIVQQ V+ K +G + Sbjct: 506 FMWFPSGLVLYWTMSNAFSIVQQYVMNKRYGQRV 539 >gi|148654185|ref|YP_001281278.1| putative inner membrane protein translocase component YidC [Psychrobacter sp. PRwf-1] gi|148573269|gb|ABQ95328.1| protein translocase subunit yidC [Psychrobacter sp. PRwf-1] Length = 566 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 130/590 (22%), Positives = 246/590 (41%), Gaps = 61/590 (10%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ------------ 45 M++ + IA+ + ++V AWQ Y + ++ T Sbjct: 1 MQKILRVLIIIAMLITAYLLVLAWQKDYANVPATSADAVTPSVSTSTTGADIPTTAGASD 60 Query: 46 -PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 P + D + + + I+ G LR Y+ + S+ Sbjct: 61 IPAATATDIPSSKADSESTEAKAGTLINVTTDRYQVKIDPVGGDVVYAALRDYNAKLHSD 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVF 160 + V L + + Y A+ + N I+ + ++ S + T + L + Sbjct: 121 NSFVLL--EDSGQRVYVAQSGLIGP-NGIDTASGRAKYSYQSDNYVMQPGQKTLTVPLTY 177 Query: 161 KNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT------ATNT 213 K + + ++ + + Y ++ + N ++ R + + Sbjct: 178 KQ-DGVTITKSFTFTQGKYPIRVNYNINNTGTQPWNGQVFAQLKRDSSKDPGMSDKGALS 236 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 G D + K+ D ++ + W+GI Y+ S + P+ +F Sbjct: 237 MATYLGGAWGTPDDDYNKLKFKDFNDGELTAASDK-GWVGIVQHYFVSAWTPN---NFTG 292 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 QF + ++ I + K T L+AG K+ ++ P Sbjct: 293 QFFSREKAGDHF-IGMNSEPIVVPANKQKDVTATLYAGPKDQESLIEV-----APGLNKT 346 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G+ + I+K +F ++ + ++GN+G +I+ T+ VK+ + K Y S A M+ I Sbjct: 347 VDYGFLWPISKVLFAILEGIHKVIGNWGWSIIALTLLVKIALMWFSNKSYYSMAKMRAIA 406 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ L+E+ + + M+ +YK +NP+AGC PILLQ+P+F A+Y V+ S+E+ Sbjct: 407 PRLQALKEEHGDD-RMKMSQEMMAIYKEEQVNPMAGCLPILLQMPIFLALYWVLVESVEL 465 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 RHAP+ WI+DL+A DP I P++M SMF Q SP P D Sbjct: 466 RHAPWILWIQDLSAMDPWFIL-------------------PMLMGASMFAQQMFSPQPTD 506 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 QA ++ ++P++F + FPAGL++YW+ +N+ ++ QQ ++ K E Sbjct: 507 PMQAKVMKFLPIIFTLFMLFFPAGLVLYWTVNNLFTMGQQYIVNKKVERE 556 >gi|303256374|ref|ZP_07342388.1| inner membrane protein OxaA [Burkholderiales bacterium 1_1_47] gi|331001500|ref|ZP_08325118.1| membrane protein insertase, YidC/Oxa1 family domain protein [Parasutterella excrementihominis YIT 11859] gi|302859865|gb|EFL82942.1| inner membrane protein OxaA [Burkholderiales bacterium 1_1_47] gi|329568229|gb|EGG50046.1| membrane protein insertase, YidC/Oxa1 family domain protein [Parasutterella excrementihominis YIT 11859] Length = 565 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 149/588 (25%), Positives = 256/588 (43%), Gaps = 59/588 (10%) Query: 9 VAIALS-VIIVYAWQNFYVYPRIEEMNNER-KNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 + LS ++ W+ + P ++ + K + + + A+ Sbjct: 12 ILFGLSAFMLYDRWEVYNGRPSFFGAETQQVATTEAPKNEAALPSQSQTASLPAEAKTAV 71 Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV--------------SSNSPIVTLLS 112 + ++++ L S + +GA LR + + +P +L Sbjct: 72 KAEPIQVETDLLKLSFDPEGAVIIGSELRKEKQTIPWTDTGLVGMILGNKAETPADVVLF 131 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILFE 169 Y A+ + P T + L+ G + L K + + Sbjct: 132 TEQKGRTYLAQTGLIGGP----YPTHKTQFKLVPGPLKMADGQDNLTVKFEGESGGVKVI 187 Query: 170 RTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLGD 226 ++ + + HY K+ V NN+ +I+ S ++ R KP+ + G Sbjct: 188 KSFTFERGHYGIKVSHEVVNNTASEIKPSVYYQLTRDGEKPEGESTMVNAYTGAAVYTDK 247 Query: 227 KSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + +SDI N W+ + Y+ S ++P++ + + G Y Sbjct: 248 DKFQKVSFSDIADGDKDFQAKADNGWIAMIQHYFVSAWVPTQGVERENYTNTV--GEKLY 305 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 TI P S T L++G ++ + P +++D+GW F+AKP Sbjct: 306 AVGSIQQMDTIAPNSSKTIEATLYSGPQDQTRLDAI-----APGLSLVVDYGWLTFLAKP 360 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 ++ L+S+ Y +VGN+G AI+L T VK + +PL+ Y S A MK++ P++ L+EK+ Sbjct: 361 IYWLLSFLYGIVGNWGWAIVLLTCIVKAILYPLSLAGYRSMAKMKDLGPRMKALKEKYGD 420 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q L AM+++YKT INP+ GC PI LQ+PVF A+Y V+ S+E+R AP+ W+ DL Sbjct: 421 DK-QRLNMAMMEMYKTEKINPVGGCLPIALQLPVFLALYWVLLASVELRDAPWIFWVTDL 479 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 AA DP I PI+M ++M IQ K++P P D QA ++ MP Sbjct: 480 AAPDPWFIL-------------------PILMIITMVIQFKLNPTPPDPVQAKMMAIMPF 520 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 VF F +GL++YW +N++SI+QQ V+ K A DR++ Sbjct: 521 VFGIMFIFFASGLVLYWLVNNILSIIQQYVVNKQIEA-----DRIKRQ 563 >gi|317165572|gb|ADV09113.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae TCDC-NG08107] Length = 545 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 146/582 (25%), Positives = 240/582 (41%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ + Q V + + A Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP--- 55 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + ++ I+ K L L Y + P V L + Sbjct: 56 -----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDEHKPFV--LFGDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + ++L N + ++ + Y Sbjct: 103 YVAQSELLDAQGNNVLKGIGFTAPQKQYSLEGDKVEVRLSAPETNGLKIDKVYTFTKGSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S S RI+R + + G + + + + +SD Sbjct: 163 LVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHA 283 ++ + S WLG+ + ++ S +I P S D Sbjct: 223 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCVAGDCSIDIKRRNDK 282 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y A S I G T L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ ADP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 457 DLSRADPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 539 >gi|167582766|ref|ZP_02375640.1| putative inner membrane protein translocase component YidC [Burkholderia thailandensis TXDOH] Length = 557 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 156/583 (26%), Positives = 251/583 (43%), Gaps = 57/583 (9%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + N + N + + +A Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA 60 Query: 59 DDRAQALSMS-----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + A + + V G I+ +G L L P Sbjct: 61 NALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPD 117 Query: 108 --VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVFKNA 163 VTL + + Y A + + PN N V+ +G +KL F++ Sbjct: 118 LSVTLFD-NAANHTYLARTGLLGG----DFPNHNDVYTQAAGPTSLAADQNTLKLAFESP 172 Query: 164 --NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEG 219 + +T + Y+ + + N + S ++R T F G Sbjct: 173 VKGGVKVVKTYTFTRGSYVIGVDTKIENVGTAPVTPSVYMELVRDNTSVETPMFSHTFLG 232 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYL 278 K + +SDI+K+ + N W+ + Y+AS +IP + + + Sbjct: 233 PAVYTDQKHFQKITFSDIDKNKADYVTSADNGWIAMVQHYFASAWIPQQGAKRDIYVEKI 292 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 Y+ I PG+S + LFAG +E + P E++ D+GW Sbjct: 293 DP--TLYRVGVKQPVAAIAPGQSADVSARLFAGPEEERMLEGI-----APGLELVKDYGW 345 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IAKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ Sbjct: 346 VTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQA 405 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 LRE+FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ Sbjct: 406 LRERFKSDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPW 464 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DL+ DP I P++M++SMF+Q K++P P D QA Sbjct: 465 ILWIHDLSQRDPYFIL-------------------PVLMAVSMFVQTKLNPTPPDPVQAK 505 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 506 MMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 548 >gi|167908935|ref|ZP_02496026.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 112] Length = 486 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 146/500 (29%), Positives = 229/500 (45%), Gaps = 44/500 (8%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI--VTLLSPSNTKNAYFAELDYVS 128 V G I+ +G L L P VTL + + Y A + Sbjct: 13 VRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPDLSVTLFDHT-ANHTYLARTGLLG 68 Query: 129 TANNIELPNSNTVWNLISGKI--LTPTTPIKLVFKNA--NNILFERTISLDE-HYLFKIV 183 + PN N V+ ++G +KL F++ + +T + Y+ + Sbjct: 69 G----DFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVD 124 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 + N + S ++R T F G K + + DI+K+ Sbjct: 125 TKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKA 184 Query: 243 SNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 + N W+ + Y+AS +IP + + Y+ I PG+S Sbjct: 185 DYVTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPGQS 242 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G Sbjct: 243 ADVSARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWG 297 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK P Q + A+++LYKT Sbjct: 298 WAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDP-QKMNAALMELYKT 356 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 357 EKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFIL------- 409 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y Sbjct: 410 ------------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLY 457 Query: 542 WSWSNVISIVQQAVIMKMHG 561 + +NV+SI QQ I + G Sbjct: 458 YVVNNVLSIAQQYYITRTLG 477 >gi|167822122|ref|ZP_02453593.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 9] Length = 492 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 146/500 (29%), Positives = 229/500 (45%), Gaps = 44/500 (8%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI--VTLLSPSNTKNAYFAELDYVS 128 V G I+ +G L L P VTL + + Y A + Sbjct: 19 VRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPDLSVTLFDHT-ANHTYLARTGLLG 74 Query: 129 TANNIELPNSNTVWNLISGKI--LTPTTPIKLVFKNA--NNILFERTISLDE-HYLFKIV 183 + PN N V+ ++G +KL F++ + +T + Y+ + Sbjct: 75 G----DFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVD 130 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 + N + S ++R T F G K + + DI+K+ Sbjct: 131 TKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKA 190 Query: 243 SNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 + N W+ + Y+AS +IP + + Y+ I PG+S Sbjct: 191 DYVTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPGQS 248 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G Sbjct: 249 ADVSARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWG 303 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK P Q + A+++LYKT Sbjct: 304 WAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDP-QKMNAALMELYKT 362 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 363 EKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFIL------- 415 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y Sbjct: 416 ------------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLY 463 Query: 542 WSWSNVISIVQQAVIMKMHG 561 + +NV+SI QQ I + G Sbjct: 464 YVVNNVLSIAQQYYITRTLG 483 >gi|167736503|ref|ZP_02409277.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 14] Length = 496 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 146/502 (29%), Positives = 229/502 (45%), Gaps = 44/502 (8%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI--VTLLSPSNTKNAYFAELDY 126 V G I+ +G L L P VTL + + Y A Sbjct: 21 QLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPDLSVTLFDHT-ANHTYLARTGL 76 Query: 127 VSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVFKNA--NNILFERTISLDE-HYLFK 181 + + PN N V+ ++G +KL F++ + +T + Y+ Sbjct: 77 LGG----DFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIG 132 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKS 240 + + N + S ++R T F G K + + DI+K+ Sbjct: 133 VDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKN 192 Query: 241 SISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + N W+ + Y+AS +IP + + Y+ I PG Sbjct: 193 KADYVTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDP--TLYRVGVKQPVAAIAPG 250 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 +S + LFAG +E + P E++ D+GW IAKP+F L+ + VGN Sbjct: 251 QSADVSARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEKIHGFVGN 305 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK P Q + A+++LY Sbjct: 306 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDP-QKMNAALMELY 364 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 KT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 365 KTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFIL----- 419 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL+ Sbjct: 420 --------------PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLV 465 Query: 540 IYWSWSNVISIVQQAVIMKMHG 561 +Y+ +NV+SI QQ I + G Sbjct: 466 LYYVVNNVLSIAQQYYITRTLG 487 >gi|107024094|ref|YP_622421.1| inner membrane protein translocase component YidC [Burkholderia cenocepacia AU 1054] gi|116691180|ref|YP_836803.1| putative inner membrane protein translocase component YidC [Burkholderia cenocepacia HI2424] gi|123071851|sp|Q1BSF7|OXAA_BURCA RecName: Full=Inner membrane protein oxaA gi|166975851|sp|A0KBN3|OXAA_BURCH RecName: Full=Inner membrane protein oxaA gi|105894283|gb|ABF77448.1| protein translocase subunit yidC [Burkholderia cenocepacia AU 1054] gi|116649269|gb|ABK09910.1| protein translocase subunit yidC [Burkholderia cenocepacia HI2424] Length = 552 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 145/503 (28%), Positives = 233/503 (46%), Gaps = 41/503 (8%) Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 + V+ G I+ +G L L+ D +TL + + Y A Sbjct: 76 QAQLVKFSTDVYDGEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFDHT-AGHTYLARTGL 133 Query: 127 VSTANNIELPNSNTVWNLI---SGKILTPTTPIKLVFKNA--NNILFERTISLDE-HYLF 180 + + PN N V+ + S + +KL F++ + +T + Y+ Sbjct: 134 LGG----DFPNHNDVYTQLNPGSTSLTGDENTLKLSFESPVKGGVKVVKTYTFTRGSYVI 189 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEK 239 + + N + + ++R T F G K + +SD++K Sbjct: 190 GVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKIDFSDLDK 249 Query: 240 SSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + + S N W+ + Y+AS +IP + + + Y+ I P Sbjct: 250 NKANFEKSSDNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDP--TLYRVGVKQPVAAIAP 307 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G+S LFAG +E + P E++ D+GW IAKP+F L+ + VG Sbjct: 308 GQSADVQARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEKIHGYVG 362 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G AI+L TV +K +FFPL+ Y S A MK I P++ LRE+FK P Q + A+++L Sbjct: 363 NWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDP-QKMNAALMEL 421 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 422 YKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFFIL---- 477 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 P++M++SMF+Q ++P P D QA ++ +MP+ F FPAGL Sbjct: 478 ---------------PVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGL 522 Query: 539 IIYWSWSNVISIVQQAVIMKMHG 561 ++Y+ +NV+SI QQ I + G Sbjct: 523 VLYYVVNNVLSIAQQYYITRKLG 545 >gi|149925381|ref|ZP_01913645.1| 60 kDa inner membrane insertion protein [Limnobacter sp. MED105] gi|149825498|gb|EDM84706.1| 60 kDa inner membrane insertion protein [Limnobacter sp. MED105] Length = 558 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 144/532 (27%), Positives = 250/532 (46%), Gaps = 40/532 (7%) Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 Q V + + A+A + + +K L + +GAQ L + Sbjct: 57 QAVAPTAGDVPADPNAIAPSIAEAAPAAQTITVKTDVLELQFSSQGAQLITSKLLNHPAA 116 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKL 158 + + P+ L + Y + V + PN T++ L+SG +KL Sbjct: 117 ENPDLPVQ--LFEQTSNRTYVGQAGLVGVP---DAPNHRTLFELVSGSTEFAPGQDQLKL 171 Query: 159 VFK-NANNILFERTIS-LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT--F 214 VFK + I T + Y +V N ++ + S +I R +++ + Sbjct: 172 VFKATSGGIENTTTYTIFKNRYDIDLVINARNTGVEPVSPSAYVQITRDGNPLESDSSLY 231 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHS 273 G +K + + DI S ++ WL + Y+ S + ++ + Sbjct: 232 ATFTGPAVYTPEKKYQKIDFEDIADRSADYVKTADSGWLAMIQHYFVSAIV-GQDGPREN 290 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + + Y ++ T+ P ++ T T L+ G ++ + P +++ Sbjct: 291 YTRQVDSN--LYSIGLVSSLGTLAPEQTATYTAKLYTGPQDQSVLEALS-----PGLDLV 343 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+GW IA+P++ L+ ++ +GN+G AI++ T+ +KL+FFPL+ Y S A M+ + Sbjct: 344 VDYGWLTVIAQPIYWLLEKIHSYIGNWGWAIVVLTILIKLVFFPLSAASYKSMAKMRKVG 403 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ +L+E++ Q+AM+++YK INPL GC PIL+QIPVF A+Y V+ S+EM Sbjct: 404 PRMQKLKEQYGDDK-MGFQRAMMEMYKREKINPLGGCMPILIQIPVFIALYWVLLASVEM 462 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R+AP+ GW+ DLAA DP I P+IM+++MFIQ +++P P D Sbjct: 463 RNAPWLGWVTDLAAPDPFYIL-------------------PVIMAVTMFIQTRLNPTPPD 503 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 QA I+ MP+VF FPAGL++YW +N++SI QQ VI + + Sbjct: 504 PVQAKIMMIMPLVFSVMFIFFPAGLVLYWVVNNILSIAQQWVITRQIESAPA 555 >gi|254251055|ref|ZP_04944373.1| Preprotein translocase subunit YidC [Burkholderia dolosa AUO158] gi|124893664|gb|EAY67544.1| Preprotein translocase subunit YidC [Burkholderia dolosa AUO158] Length = 554 Score = 429 bits (1102), Expect = e-117, Method: Composition-based stats. Identities = 151/579 (26%), Positives = 251/579 (43%), Gaps = 51/579 (8%) Query: 1 MERNWNYFVAIALSVIIVY--AWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + + + + + A + Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGTGATPTAGNV 60 Query: 59 DDRAQALSMSP--------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 A + + V+ G I+ +G L L+ D +TL Sbjct: 61 PAAAPGAAPTTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK-QGDGKQPDLYITL 119 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNA--NN 165 + + Y A + + PN N V+ + + +KL F++ Sbjct: 120 FDHT-AGHTYLARTGLLGG----DFPNHNDVYTEVGNGPTSLSGDQNTLKLSFESPVKGG 174 Query: 166 ILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAV 223 + +T + Y+ + + N + + ++R T F G Sbjct: 175 VKVVKTYTFTRGSYVIGVDTKIENVGTTPVTPTVYMELVRDNTAVETPMFSHTFLGPAVY 234 Query: 224 LGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 K + +SD++K+ + N W+ + Y+AS +IP + + + Sbjct: 235 TDAKHFQKINFSDLDKNKADYVTSADNGWVAMVQHYFASAWIPQQGVKRDIYAEKIDP-- 292 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y+ TI PG+S LFAG +E + P E++ D+GW I Sbjct: 293 TLYRVGVKQPVATIAPGQSADVQARLFAGPEEERMLEGI-----APGLELVKDYGWVTII 347 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+ Sbjct: 348 AKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRER 407 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI Sbjct: 408 FKSDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWI 466 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ DP I P++M++SMF+Q K++P P D QA ++ + Sbjct: 467 HDLSQRDPYFIL-------------------PVLMAVSMFVQTKLNPTPPDPVQAKMMMF 507 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 508 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 546 >gi|83719666|ref|YP_443729.1| inner membrane protein translocase component YidC [Burkholderia thailandensis E264] gi|167620894|ref|ZP_02389525.1| putative inner membrane protein translocase component YidC [Burkholderia thailandensis Bt4] gi|123536100|sp|Q2STM0|OXAA_BURTA RecName: Full=Inner membrane protein oxaA gi|83653491|gb|ABC37554.1| inner membrane protein, 60 kDa [Burkholderia thailandensis E264] Length = 557 Score = 428 bits (1101), Expect = e-117, Method: Composition-based stats. Identities = 156/583 (26%), Positives = 251/583 (43%), Gaps = 57/583 (9%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + N + N + + +A Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA 60 Query: 59 DDRAQALSMS-----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + A + + V G I+ +G L L P Sbjct: 61 NALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPD 117 Query: 108 --VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVFKNA 163 VTL + + Y A + + PN N V+ +G +KL F++ Sbjct: 118 LSVTLFD-NAANHTYLARTGLLGG----DFPNHNDVYTQAAGPTSLAAGQNTLKLAFESP 172 Query: 164 --NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEG 219 + +T + Y+ + + N + S ++R T F G Sbjct: 173 VKGGVKVVKTYTFTRGSYVIGVDTKIENVGTAPVTPSVYMELVRDNTSVETPMFSHTFLG 232 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYL 278 K + +SDI+K+ + N W+ + Y+AS +IP + + + Sbjct: 233 PAVYTDQKHFQKITFSDIDKNKADYVTSADNGWIAMVQHYFASAWIPQQGAKRDIYVEKI 292 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 Y+ I PG+S + LFAG +E + P E++ D+GW Sbjct: 293 DP--TLYRVGVKQPVAAIAPGQSADVSARLFAGPEEERMLEGI-----APGLELVKDYGW 345 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IAKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ Sbjct: 346 VTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQA 405 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 LRE+FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ Sbjct: 406 LRERFKSDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPW 464 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DL+ DP I P++M++SMF+Q K++P P D QA Sbjct: 465 ILWIHDLSQRDPYFIL-------------------PVLMAVSMFVQTKLNPTPPDPVQAK 505 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 506 MMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 548 >gi|119503568|ref|ZP_01625651.1| putative inner membrane protein translocase component YidC [marine gamma proteobacterium HTCC2080] gi|119460630|gb|EAW41722.1| putative inner membrane protein translocase component YidC [marine gamma proteobacterium HTCC2080] Length = 571 Score = 428 bits (1101), Expect = e-117, Method: Composition-based stats. Identities = 150/601 (24%), Positives = 262/601 (43%), Gaps = 66/601 (10%) Query: 1 MERNWNYFVAIA--LSVIIVYAWQNF------------------YVYPRIEEMNNERKNI 40 M+ +A A LS +++ W F + P Sbjct: 1 MDIQRYLLIAAAAVLSFMLLTEWNVFKDQRVAATQDTSPRIANSFSSPAASPQEQPTGIA 60 Query: 41 ------QTVKQPNQVDNSYAAVLIDDRAQALSMSPR--VELKNPSLIGSINLKGAQFDDL 92 T + V A+ S P+ + +KN L ++L+G + Sbjct: 61 NRSDIYDTAANSDDVPTILPALAPQTNTPLASSEPKNIIVIKNDVLEFVVDLRGGDIIET 120 Query: 93 NLRGYHLDV-SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151 +L Y + ++P+V L +++ Y + V + + Sbjct: 121 SLTKYPERIEDPDTPLVLL--ERSSERTYIMQSGLVGPDGIDTNGRAIYDAAKNRYDATS 178 Query: 152 PTTPIKLVF-KNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHK--- 206 + I L + E+ ++ + Y ++ + NN + + P ++ R Sbjct: 179 GSKTIVLSARDTPPGVAVEKHFTVAPNTYTIEVSYHIVNNGTEIWQSIPFAQLKRDSSPA 238 Query: 207 PQTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 P T+ FG+Q G + + ++DI ++ W+ + Y+ + + Sbjct: 239 PSADTSGFGMQPFLGAATTTPENRYEKFTFADIADDPWKT-QQTGGWIAMLQHYFTAALV 297 Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 P E + + DG A F++ + I PG++ + +AG K+ T+ Sbjct: 298 PDAEATHTYSTRRTRDGFNI--AGFTSEPLRIAPGQTGSWNTQFYAGPKDQYTLAEL--- 352 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 P E+++D+GW ++I KP+F L++ ++V N+G+AI+L T+ +K FF L+ Y Sbjct: 353 --APHLELVVDYGWLWWIGKPLFWLLTQIQSVVINWGVAIILLTLLIKTAFFKLSAASYR 410 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A M+ QPK+ ++E+ Q +AM++LYK INP+ GC PIL+Q+PVF A+Y Sbjct: 411 SMAKMRKAQPKMVAIKEQHANDK-QKQSQAMMELYKKEKINPMGGCLPILVQMPVFIALY 469 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 V+ S+E+R APF WIKDLA DP + P++M SMF Sbjct: 470 WVLMESVELRQAPFALWIKDLAVMDPYFVL-------------------PLMMGASMFFM 510 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 K++PPP D QA ++ W+PVVF F FPAGL++YW +N++S+ QQ I + ++ Sbjct: 511 QKLNPPPPDPMQAKLMQWLPVVFTFFFLWFPAGLVLYWVVNNLLSMAQQYYITRQIERDM 570 Query: 565 G 565 Sbjct: 571 S 571 >gi|325519717|gb|EGC99037.1| membrane protein insertase [Burkholderia sp. TJI49] Length = 553 Score = 428 bits (1100), Expect = e-117, Method: Composition-based stats. Identities = 145/499 (29%), Positives = 233/499 (46%), Gaps = 41/499 (8%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 V+ G I+ +G L L+ D +TL + + Y A + Sbjct: 81 VKFSTDVYDGEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFDHT-AGHTYLARSGLLGG- 137 Query: 131 NNIELPNSNTVWNLISG---KILTPTTPIKLVFKNA--NNILFERTISLDE-HYLFKIVD 184 + PN N V+ +S + +KL F++ + +T + Y+ + Sbjct: 138 ---DFPNHNDVYTQVSTGPTSLTGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDT 194 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 + N + + ++R T F G K + +SD++K+ Sbjct: 195 KIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKINFSDLDKNKAD 254 Query: 244 NFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 + N W+ + Y+AS +IP + + + + Y+ I PG+S Sbjct: 255 YVTSADNGWVAMVQHYFASAWIPQQGVKRDIYAEKIDP--SLYRVGVKQPVAAIAPGQSA 312 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 LFAG +E + P E++ D+GW IAKP+F L+ + LVGN+G Sbjct: 313 DVQARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEKIHGLVGNWGW 367 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L TV +K +FFPL+ Y S A MK I P++ LRE+FK P Q + A+++LYKT Sbjct: 368 AIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDP-QKMNAALMELYKTE 426 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 427 KVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFFIL-------- 478 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P++M++SMF+Q ++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 479 -----------PVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYY 527 Query: 543 SWSNVISIVQQAVIMKMHG 561 +NV+SI QQ I + G Sbjct: 528 VVNNVLSIAQQYYITRKLG 546 >gi|206558829|ref|YP_002229589.1| putative inner membrane protein translocase component YidC [Burkholderia cenocepacia J2315] gi|254772759|sp|B4E7D5|OXAA_BURCJ RecName: Full=Inner membrane protein oxaA gi|198034866|emb|CAR50738.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 552 Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 145/503 (28%), Positives = 234/503 (46%), Gaps = 41/503 (8%) Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 + V+ G I+ +G L L+ D +TL + + Y A Sbjct: 76 QAQLVKFSTDVYDGEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFDHT-AGHTYLARTGL 133 Query: 127 VSTANNIELPNSNTVWNLI---SGKILTPTTPIKLVFKNA--NNILFERTISLDE-HYLF 180 + + PN N V+ + S + +KL F++ + +T + Y+ Sbjct: 134 LGG----DFPNHNDVYTQLNPGSTSLTGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVI 189 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEK 239 + + N + + ++R T F G K + +SD++K Sbjct: 190 GVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKIDFSDLDK 249 Query: 240 SSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + + + N W+ + Y+AS +IP + + + A Y+ I P Sbjct: 250 NKANFEKSADNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDP--ALYRVGVKQPVAAIAP 307 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G+S LFAG +E + P E++ D+GW IAKP+F L+ + VG Sbjct: 308 GQSADVQARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEKIHGYVG 362 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G AI+L TV +K +FFPL+ Y S A MK I P++ LRE+FK P Q + A+++L Sbjct: 363 NWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDP-QKMNAALMEL 421 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 422 YKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFFIL---- 477 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 P++M++SMF+Q ++P P D QA ++ +MP+ F FPAGL Sbjct: 478 ---------------PVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGL 522 Query: 539 IIYWSWSNVISIVQQAVIMKMHG 561 ++Y+ +NV+SI QQ I + G Sbjct: 523 VLYYVVNNVLSIAQQYYITRKLG 545 >gi|170734513|ref|YP_001766460.1| putative inner membrane protein translocase component YidC [Burkholderia cenocepacia MC0-3] gi|254772758|sp|B1K0Y4|OXAA_BURCC RecName: Full=Inner membrane protein oxaA gi|169817755|gb|ACA92338.1| 60 kDa inner membrane insertion protein [Burkholderia cenocepacia MC0-3] Length = 553 Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 145/503 (28%), Positives = 234/503 (46%), Gaps = 41/503 (8%) Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 + V+ G I+ +G L L+ D +TL + + Y A Sbjct: 77 QAQLVKFSTDVYDGEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFDHT-AGHTYLARTGL 134 Query: 127 VSTANNIELPNSNTVWNLI---SGKILTPTTPIKLVFKNA--NNILFERTISLDE-HYLF 180 + + PN N V+ + S + +KL F++ + +T + Y+ Sbjct: 135 LGG----DFPNHNDVYTQLNPGSTSLTGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVI 190 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEK 239 + + N + + ++R T F G K + +SD++K Sbjct: 191 GVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKIDFSDLDK 250 Query: 240 SSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + + + N W+ + Y+AS +IP + + + A Y+ I P Sbjct: 251 NKANFEKSADNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDP--ALYRVGVKQPVAAIAP 308 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G+S LFAG +E + P E++ D+GW IAKP+F L+ + VG Sbjct: 309 GQSADVQARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEKIHGYVG 363 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G AI+L TV +K +FFPL+ Y S A MK I P++ LRE+FK P Q + A+++L Sbjct: 364 NWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDP-QKMNAALMEL 422 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 423 YKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFFIL---- 478 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 P++M++SMF+Q ++P P D QA ++ +MP+ F FPAGL Sbjct: 479 ---------------PVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGL 523 Query: 539 IIYWSWSNVISIVQQAVIMKMHG 561 ++Y+ +NV+SI QQ I + G Sbjct: 524 VLYYVVNNVLSIAQQYYITRKLG 546 >gi|53724898|ref|YP_104854.1| inner membrane protein translocase component YidC [Burkholderia mallei ATCC 23344] gi|67639597|ref|ZP_00438442.1| inner membrane protein, 60 kDa [Burkholderia mallei GB8 horse 4] gi|121600195|ref|YP_994138.1| putative inner membrane protein translocase component YidC [Burkholderia mallei SAVP1] gi|124386283|ref|YP_001028205.1| putative inner membrane protein translocase component YidC [Burkholderia mallei NCTC 10229] gi|126451415|ref|YP_001083056.1| putative inner membrane protein translocase component YidC [Burkholderia mallei NCTC 10247] gi|167001176|ref|ZP_02266975.1| membrane protein OxaA [Burkholderia mallei PRL-20] gi|254174811|ref|ZP_04881472.1| inner membrane protein, 60 kDa [Burkholderia mallei ATCC 10399] gi|254201964|ref|ZP_04908328.1| membrane protein OxaA [Burkholderia mallei FMH] gi|254207296|ref|ZP_04913647.1| membrane protein OxaA [Burkholderia mallei JHU] gi|254359605|ref|ZP_04975876.1| membrane protein OxaA [Burkholderia mallei 2002721280] gi|81684886|sp|Q62EM4|OXAA_BURMA RecName: Full=Inner membrane protein oxaA gi|166975852|sp|A3MS20|OXAA_BURM7 RecName: Full=Inner membrane protein oxaA gi|166975853|sp|A2S8D6|OXAA_BURM9 RecName: Full=Inner membrane protein oxaA gi|166975854|sp|A1V7D5|OXAA_BURMS RecName: Full=Inner membrane protein oxaA gi|52428321|gb|AAU48914.1| inner membrane protein, 60 kDa [Burkholderia mallei ATCC 23344] gi|121229005|gb|ABM51523.1| inner membrane protein, 60 kDa [Burkholderia mallei SAVP1] gi|124294303|gb|ABN03572.1| inner membrane protein, 60 kDa [Burkholderia mallei NCTC 10229] gi|126244285|gb|ABO07378.1| inner membrane protein, 60 kDa [Burkholderia mallei NCTC 10247] gi|147747858|gb|EDK54934.1| membrane protein OxaA [Burkholderia mallei FMH] gi|147752838|gb|EDK59904.1| membrane protein OxaA [Burkholderia mallei JHU] gi|148028819|gb|EDK86751.1| membrane protein OxaA [Burkholderia mallei 2002721280] gi|160695856|gb|EDP85826.1| inner membrane protein, 60 kDa [Burkholderia mallei ATCC 10399] gi|238520165|gb|EEP83627.1| inner membrane protein, 60 kDa [Burkholderia mallei GB8 horse 4] gi|243063003|gb|EES45189.1| membrane protein OxaA [Burkholderia mallei PRL-20] Length = 558 Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 155/584 (26%), Positives = 249/584 (42%), Gaps = 58/584 (9%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + N + N + + +A Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA 60 Query: 59 DDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + A + V G I+ +G L L P Sbjct: 61 ANALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQP 117 Query: 107 I--VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVFKN 162 VTL + + Y A + + PN N V+ ++G +KL F++ Sbjct: 118 DLSVTLFDHT-ANHTYLARTGLLGG----DFPNHNDVYAQVAGPTSLAADQNTLKLSFES 172 Query: 163 A--NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQE 218 + +T + Y+ + + N + S ++R T F Sbjct: 173 PVKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFL 232 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKY 277 G K + + DI+K+ + N W+ + Y+AS +IP + Sbjct: 233 GPAVYTDQKHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEK 292 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + Y+ I PG+S + LFAG +E + P E++ D+G Sbjct: 293 IDP--TLYRVGVKQPVEAIAPGQSADVSARLFAGPEEERMLEGI-----APGLELVKDYG 345 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W IAKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ Sbjct: 346 WVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQ 405 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 LRE+FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP Sbjct: 406 ALRERFKSDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAP 464 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DL+ DP I P++M++SMF+Q K++P P D QA Sbjct: 465 WVLWIHDLSQRDPYFIL-------------------PVLMAVSMFVQTKLNPTPPDPVQA 505 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 506 KMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 549 >gi|126439633|ref|YP_001057148.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 668] gi|166975856|sp|A3N477|OXAA_BURP6 RecName: Full=Inner membrane protein oxaA gi|126219126|gb|ABN82632.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 668] Length = 558 Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 154/584 (26%), Positives = 247/584 (42%), Gaps = 58/584 (9%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQT------------VKQP 46 M+ I ++ WQ + P + N + N + Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGANAAAA 60 Query: 47 NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + A + + V G I+ +G L L P Sbjct: 61 ANALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQP 117 Query: 107 I--VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVFKN 162 VTL + + Y A + + PN N V+ ++G +KL F++ Sbjct: 118 DLSVTLFDHT-ANHTYLARTGLLGG----DFPNHNDVYAQVAGPTSLAADQNTLKLSFES 172 Query: 163 A--NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQE 218 + +T + Y+ + + N + S ++R T F Sbjct: 173 PVKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFL 232 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKY 277 G K + + DI+K+ + N W+ + Y+AS +IP + Sbjct: 233 GPAVYTDQKHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEK 292 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + Y+ I PG+S + LFAG +E + P E++ D+G Sbjct: 293 IDP--TLYRVGVKQPVAAIAPGQSADVSARLFAGPEEERMLEGI-----APGLELVKDYG 345 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W IAKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ Sbjct: 346 WVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQ 405 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 LRE+FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP Sbjct: 406 ALRERFKSDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAP 464 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DL+ DP I P++M++SMF+Q K++P P D QA Sbjct: 465 WVLWIHDLSQRDPYFIL-------------------PVLMAVSMFVQTKLNPTPPDPVQA 505 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 506 KMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 549 >gi|53717718|ref|YP_106704.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei K96243] gi|76811170|ref|YP_331720.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 1710b] gi|126453447|ref|YP_001064392.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 1106a] gi|167813580|ref|ZP_02445260.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 91] gi|167892205|ref|ZP_02479607.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 7894] gi|167900716|ref|ZP_02487921.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei NCTC 13177] gi|167916975|ref|ZP_02504066.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei BCC215] gi|217423939|ref|ZP_03455439.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 576] gi|226193291|ref|ZP_03788901.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei Pakistan 9] gi|237810283|ref|YP_002894734.1| inner membrane protein OxaA [Burkholderia pseudomallei MSHR346] gi|242316035|ref|ZP_04815051.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 1106b] gi|254184152|ref|ZP_04890743.1| membrane protein OxaA [Burkholderia pseudomallei 1655] gi|254186623|ref|ZP_04893140.1| membrane protein OxaA [Burkholderia pseudomallei Pasteur 52237] gi|254194722|ref|ZP_04901153.1| membrane protein OxaA [Burkholderia pseudomallei S13] gi|254262072|ref|ZP_04953126.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 1710a] gi|254298582|ref|ZP_04966033.1| membrane protein OxaA [Burkholderia pseudomallei 406e] gi|81690513|sp|Q63YW1|OXAA_BURPS RecName: Full=Inner membrane protein oxaA gi|123600731|sp|Q3JXI3|OXAA_BURP1 RecName: Full=Inner membrane protein oxaA gi|166975855|sp|A3NPX1|OXAA_BURP0 RecName: Full=Inner membrane protein oxaA gi|52208132|emb|CAH34062.1| putative membrane protein [Burkholderia pseudomallei K96243] gi|76580623|gb|ABA50098.1| inner membrane protein, 60 kDa [Burkholderia pseudomallei 1710b] gi|126227089|gb|ABN90629.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 1106a] gi|157808712|gb|EDO85882.1| membrane protein OxaA [Burkholderia pseudomallei 406e] gi|157934308|gb|EDO89978.1| membrane protein OxaA [Burkholderia pseudomallei Pasteur 52237] gi|169651472|gb|EDS84165.1| membrane protein OxaA [Burkholderia pseudomallei S13] gi|184214684|gb|EDU11727.1| membrane protein OxaA [Burkholderia pseudomallei 1655] gi|217393002|gb|EEC33024.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 576] gi|225934891|gb|EEH30868.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei Pakistan 9] gi|237503961|gb|ACQ96279.1| inner membrane protein OxaA [Burkholderia pseudomallei MSHR346] gi|242139274|gb|EES25676.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 1106b] gi|254220761|gb|EET10145.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 1710a] Length = 558 Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 154/584 (26%), Positives = 247/584 (42%), Gaps = 58/584 (9%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQT------------VKQP 46 M+ I ++ WQ + P + N + N + Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA 60 Query: 47 NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + A + + V G I+ +G L L P Sbjct: 61 ANALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQP 117 Query: 107 I--VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVFKN 162 VTL + + Y A + + PN N V+ ++G +KL F++ Sbjct: 118 DLSVTLFDHT-ANHTYLARTGLLGG----DFPNHNDVYAQVAGPTSLAADQNTLKLSFES 172 Query: 163 A--NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQE 218 + +T + Y+ + + N + S ++R T F Sbjct: 173 PVKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFL 232 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKY 277 G K + + DI+K+ + N W+ + Y+AS +IP + Sbjct: 233 GPAVYTDQKHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEK 292 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + Y+ I PG+S + LFAG +E + P E++ D+G Sbjct: 293 IDP--TLYRVGVKQPVAAIAPGQSADVSARLFAGPEEERMLEGI-----APGLELVKDYG 345 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W IAKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ Sbjct: 346 WVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQ 405 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 LRE+FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP Sbjct: 406 ALRERFKSDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAP 464 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DL+ DP I P++M++SMF+Q K++P P D QA Sbjct: 465 WVLWIHDLSQRDPYFIL-------------------PVLMAVSMFVQTKLNPTPPDPVQA 505 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 506 KMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 549 >gi|119475233|ref|ZP_01615586.1| putative inner membrane protein translocase component YidC [marine gamma proteobacterium HTCC2143] gi|119451436|gb|EAW32669.1| putative inner membrane protein translocase component YidC [marine gamma proteobacterium HTCC2143] Length = 569 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 163/598 (27%), Positives = 265/598 (44%), Gaps = 67/598 (11%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNF---------------YVYPRIEEMNNERKNIQTV 43 M+ + ALS +++ W F P + + + Sbjct: 1 MDFQRYLLIGSIAALSFMLLTEWVQFKEQNSGNNVVAAYQLQQGPVTGDNASRSSEMPNA 60 Query: 44 KQPNQVD-------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 + PN ++ + A + R+++K L IN G Sbjct: 61 QTPNGTQIDSNVDIPTFEQESSGNEIAASNTISRIKVKTDMLEIDINTLGGDIIFAAFPK 120 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS------TANNIELPNSNTVWNLISGKIL 150 ++ + + TLL SN + Y A+ + ++ T + L + Sbjct: 121 HYAKLDTPEIPFTLLEQSN-RLTYIAQSGLIGVNGIDTAKGRARFTSAKTEYVLSDSE-- 177 Query: 151 TPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHK--- 206 + LVF++ + + + YL + V NNS G++ R Sbjct: 178 -DEMAVDLVFQSNDPVSITKRFHFTRGEYLIGVEYIVKNNSEMPWSGGMFGQLKRDNSPD 236 Query: 207 PQTATNTFGVQEGFIAVLG--DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 P T+ G+ A + D+ + + DIE++S + W+ I Y+ S ++ Sbjct: 237 PSADTSGMGLAPYLGAAINLPDEPYKKVSFDDIEENSFPKQNIEGGWVAIIQHYFTSAWV 296 Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 P+ + + + DG F++ +IT+ G + + L+ G K+ + Sbjct: 297 PNAKQTHAYSMRKTKDGANI--VGFTSPQITVAAGATGDVKSELYIGPKDQYRLEEIS-- 352 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 P E+ +D+G ++IA+P+F L++ + +GN+G AI+ T+ VK FF L K Y Sbjct: 353 ---PGLELTVDYGILWWIAQPLFWLLTKLHGYLGNWGFAIIAVTILVKAAFFQLNAKAYT 409 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S ANM+ +QPK+ LRE++ Q + M+ LYK INPL GC PIL+Q+PVF A+Y Sbjct: 410 SMANMRKVQPKLTALRERYADDK-QKQSQEMMALYKREKINPLGGCLPILVQMPVFMALY 468 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 V+ S+E+RHAPF G+IKDL+ DP I P+IM +SMFIQ Sbjct: 469 WVLMESVELRHAPFIGYIKDLSVMDPYFIL-------------------PLIMGVSMFIQ 509 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + +PPP D QA I+ WMPV+F F FPAGL++YW +N +SI QQ +I K A Sbjct: 510 QRFNPPPPDPMQAKIMQWMPVMFTFFFLFFPAGLVLYWVVNNTLSIAQQYLITKRIEA 567 >gi|93007297|ref|YP_581734.1| putative inner membrane protein translocase component YidC [Psychrobacter cryohalolentis K5] gi|92394975|gb|ABE76250.1| protein translocase subunit yidC [Psychrobacter cryohalolentis K5] Length = 564 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 135/591 (22%), Positives = 250/591 (42%), Gaps = 57/591 (9%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY---- 53 M++ + + IA+ + +++ AW++ Y + E P+ + Sbjct: 1 MQKIFRVMIIIAMLITAYLLILAWRDDYADAPAVDTVPETAASVGADIPSTSGAAGDIPV 60 Query: 54 -------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 V A + + + + IN +G L+ Y + S+ P Sbjct: 61 QTLPVDNGTVDSAVTATPATDAGLITVTTDRYDIKINPEGGDIVYAALKQYDATLDSDKP 120 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKN 162 V L +N+ Y A+ + N I+ ++ + + T + L +K Sbjct: 121 FVLL--ENNSNRVYVAQSGLIG-QNGIDTAEGRAKYSHTANNYVMEKGQQTLSVPLTYKK 177 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT------ATNTFGV 216 + + + Y I + N S + ++ R + + Sbjct: 178 DGVTVTKTFTFTHDKYPIDISYKIQNASTAAWQGQMFAQLKRDDSKDPGMSDKGALSMAT 237 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G D + K+ ++ + W+GI Y+ S + P +F +F Sbjct: 238 YLGGAWGTPDDPYNKLKFGKFNDGELTTTSDK-GWVGIVQHYFVSAWTPE---NFTGKFF 293 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 G Y F++ + + P K +T L+AG K + +D+ Sbjct: 294 SRETGDD-YFIGFNSQPVNVAPNKQVTLNATLYAGPKVQSELKDV-----AVGLNQTVDY 347 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G + I+K +F ++ + ++GN+G +I+L T+ VKL + K Y S A M+ I P++ Sbjct: 348 GLLWPISKILFGILDGIHKVIGNWGWSIILLTILVKLALMWFSNKSYYSMAKMRAIAPRL 407 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 L+E+ + + M+ +YK +NP+AGC PIL+Q+P+F A+Y V+ S+E+RHA Sbjct: 408 AALKEEHGDD-RMKMSQEMMAMYKEEKVNPMAGCLPILMQMPIFLALYWVLVESVELRHA 466 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ WI+DL+A DP I P++M SMFIQ +++P PAD Q Sbjct: 467 PWILWIQDLSAMDPWFIL-------------------PLLMGASMFIQQQLNPQPADPMQ 507 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 A ++ ++P++F + FPAGL++YW+ +N+ S+ Q ++ K E L Sbjct: 508 AKVMKFLPIIFTAFMLFFPAGLVLYWTVNNLFSMTHQYIVNKKVEEEQKLR 558 >gi|291615449|ref|YP_003525606.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Sideroxydans lithotrophicus ES-1] gi|291585561|gb|ADE13219.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Sideroxydans lithotrophicus ES-1] Length = 545 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 146/568 (25%), Positives = 251/568 (44%), Gaps = 44/568 (7%) Query: 5 WNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 F+ + S +V W + P + + + +V + + A Sbjct: 4 RRLFLFLTFSFSLVLLWSAWTRQNEPSAQAESAVIQKDPSVPLEPARVSEQQVMSSSLEA 63 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 Q S ++++ IN G L+L + + + P+ + Y A Sbjct: 64 QKTSAGKKIDVTTDIFKVVINTTGGNIQHLDLLKHKDAIDKSKPLTLM--QQQGDRIYIA 121 Query: 123 ELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFERTISLDE-H 177 + + LP N +++ + ++L +++ + + Sbjct: 122 QSGLLGKG----LPTHNAEFSVTGDQFHLSEGKDDLEVRLTALDSDEARVTKVYTFHRGS 177 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ--TATNTFGVQEGFIAVLGDKSLVEQKYS 235 YL + + N S + S +++R A+ G + + ++S Sbjct: 178 YLIDVTYEIENKSQSALLPSAYFQLVRDSTPVAGASRFVPTFTGPAIYTEQEKFRKIQFS 237 Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 DIEK+ + N W+G+ Y+ S ++P + K L + A Sbjct: 238 DIEKNKAKLPLNPDNGWIGMLQHYFVSAWLPEAKGKREFYAKKLDGNE--FSAGVILPVA 295 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I PG++ + L+AG + D P + +D+GW IA P+F L+S+ Sbjct: 296 KIEPGQTGKISAELYAGPAQSKL------DKIAPGLGLTVDYGWLTIIATPLFWLLSHID 349 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + N+G++I+L TV +KL FFPL+ Y S A M+ + PK++++++++ + L A Sbjct: 350 EWIHNWGVSIILLTVLIKLAFFPLSAASYRSMAKMRLVAPKLEKIKQQYSDD-REKLNHA 408 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M+ LYKT INPL GC P+++QIPVF A+Y I S+E+RHAPF+GWI DL+AADP + Sbjct: 409 MMDLYKTEKINPLGGCLPMIIQIPVFIALYWAILSSVELRHAPFFGWITDLSAADPYYVL 468 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 P+IM LSM +Q K++P P D QA ++ MP+VF F Sbjct: 469 -------------------PLIMGLSMLVQSKLNPVPPDPMQAKLMQIMPIVFSVVFFFF 509 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGA 562 PAGL++Y +N++SI QQ I + A Sbjct: 510 PAGLVLYSVVNNILSIAQQWYITRGTKA 537 >gi|91790727|ref|YP_551679.1| protein translocase subunit yidC [Polaromonas sp. JS666] gi|91699952|gb|ABE46781.1| protein translocase subunit yidC [Polaromonas sp. JS666] Length = 580 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 137/599 (22%), Positives = 248/599 (41%), Gaps = 66/599 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM--------------------------- 33 M + + +V W + VY + Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDQWQVYNGQKATFFPATTQSAKAPAAATSAPAASASSVP 60 Query: 34 --NNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDD 91 + + V A A + RV + L + + +G Sbjct: 61 VSPSTASAVPAVPGSAPGAAPGAVPAGAPSPAAAATRERVVVNTDVLALTFDSEGGTLVH 120 Query: 92 LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL- 150 + ++++ V L +T Y A+ +++ P T+ ++ G+ Sbjct: 121 SAFTRFKDMANTDAGFVLL--DESTNRVYVAQTGLIASGTGGTFPTHKTLMTVVPGERSL 178 Query: 151 ---TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH- 205 +K + + +T +L Y + V N + +++R Sbjct: 179 KDGQNELQVKFESADLGGVKLVKTYTLKRGSYDIAVRHDVINTGSAPVAPQLYMQLVRDG 238 Query: 206 -KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVF 263 KP ++ + G K + ++ DIE + + +N ++ + Y+A+ + Sbjct: 239 NKPPGESSFYSTFTGPAIYTEAKKYQKVEFKDIENNKVDVEKQATNGYVAMVQHYFAAAW 298 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 I + + + Y +I PG + T + LF G +E + Sbjct: 299 ILADGLKRDLFLRKVDAN--LYAVGLITPLDSIAPGATKTIDSRLFVGPQEEKKLEAL-- 354 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 P E++ D+GW +AKP++ L+ + + N+G +I+ + +K+ F+ L K Y Sbjct: 355 ---APGLELVKDYGWLTILAKPLYWLLDKLHGFLLNWGWSIVALVLLLKIAFYWLNAKAY 411 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S A MK I PKI E+RE+ K PQ +Q+AM+++Y+ +NP+ GC+PI++QIPVF A+ Sbjct: 412 ASMAKMKAINPKIMEMRERLK-DKPQEMQQAMMKIYREEKVNPMGGCFPIMVQIPVFIAL 470 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y V+ S+EMR+AP+ WI DL+A DP I P++M+L+ + Sbjct: 471 YWVLLSSVEMRNAPWVLWIHDLSAPDPFFIL-------------------PVLMTLTTML 511 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 Q ++P P D QA ++ +MP++F FPAGL++YW +N++SI QQ VI G Sbjct: 512 QTALNPAPPDPMQAKLMWFMPLIFSVMFFFFPAGLVLYWITNNILSIAQQWVINTRMGV 570 >gi|254670910|emb|CBA07484.1| probable inner-membrane protein [Neisseria meningitidis alpha153] Length = 545 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 144/582 (24%), Positives = 239/582 (41%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ + Q V + + A Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKPVPAPQQTAQQQAVTASAEAALAPATP--- 55 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + ++ I+ K L L Y N P + L + Sbjct: 56 -----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + ++L + ++ + Y Sbjct: 103 YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S S RI+R + + G + + + + +SD Sbjct: 163 LVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHA 283 ++ + S WLG+ + ++ S +I P S + D Sbjct: 223 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDK 282 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y S I G T L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSTSVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ ADP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 457 DLSRADPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 539 >gi|296137608|ref|YP_003644850.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Thiomonas intermedia K12] gi|295797730|gb|ADG32520.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Thiomonas intermedia K12] Length = 565 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 147/584 (25%), Positives = 243/584 (41%), Gaps = 59/584 (10%) Query: 5 WNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 + + ++ +++ + ++ + P V Q + Sbjct: 4 RRSVLWVVFTMSMIFLYNSWLRYNGETDLFGTPPAHPAQVASAPTSAVPQAAPTTATPPN 63 Query: 56 VLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + LS ++ + I+ +G L Y + Sbjct: 64 IAGAAATAPLSAPVAAASAAPAAQLTTIRTDLMDVKISSRGGNLVYAKLLKY-ESRTEPG 122 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI---LTPTTPIKLVFKN 162 V L N Y A+ + + PN T ++ G T +KLV + Sbjct: 123 KNVVLFD-DTPSNKYMAQSGLIGG----DFPNHETEMTVLPGPRDMGNAKTLQVKLVSPD 177 Query: 163 ANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN---TFGVQE 218 I ERT + + Y+ + +T+TN + +++R A + + Sbjct: 178 LGGIKLERTYTFTRDSYVVNVQNTITNTGSVAVAPQMYMQLVRDGNTPAGDESHFYHTYT 237 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G + ++ D+ K++ + + W+ + Y+ S ++P Sbjct: 238 GPAYYDNANKFQKFEFKDL-KTNEAPKKADSGWVAMIQHYFVSAWVPEPYEG-SRDLYTR 295 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 G Y I PGKSITT LF G + T+ P E++ D+GW Sbjct: 296 KLGDNLYAVGVIQPLPQIAPGKSITTDAKLFVGPELESTLGAL-----APGLELVKDYGW 350 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +AKP+F L+ + +V N+G +I++ T+ +KL FFPL Y S A MK + P+I+ Sbjct: 351 VTILAKPIFWLLEMIHKVVQNWGWSIIVLTLLIKLAFFPLTAASYKSMARMKAVGPRINA 410 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 LRE +K + + +AM++LY+ INPL GC PI++QIPVF A+Y V+ S+E+R AP+ Sbjct: 411 LRESYKGDQAK-MNQAMVELYRKEKINPLGGCLPIVIQIPVFIALYWVLLSSVELRGAPW 469 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DL+A DP I P IM+ + F+Q+K++P P D QA Sbjct: 470 ILWIHDLSAKDPYYIL-------------------PAIMTATSFLQVKLNPTPPDPMQAR 510 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP F FPAGL++YW +N SI QQ I K G Sbjct: 511 LMWIMPAAFSIMFFFFPAGLVLYWLTNNTTSIAQQWFINKKMGV 554 >gi|270158408|ref|ZP_06187065.1| inner membrane protein OxaA [Legionella longbeachae D-4968] gi|289166753|ref|YP_003456891.1| cytoplasmic insertase into membrane protein, Sec system [Legionella longbeachae NSW150] gi|269990433|gb|EEZ96687.1| inner membrane protein OxaA [Legionella longbeachae D-4968] gi|288859926|emb|CBJ13912.1| cytoplasmic insertase into membrane protein, Sec system [Legionella longbeachae NSW150] Length = 555 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 146/574 (25%), Positives = 258/574 (44%), Gaps = 47/574 (8%) Query: 5 WNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNN--ERKNIQTVKQPNQVDNSYAAVLID 59 + +AL S+ + AWQ Y + ++N + + + A + Sbjct: 4 RRVILYMALALISLSLWNAWQIDYPTKPAPTDSAITNQQNSEPLLPQMAPSTAVATSITP 63 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPIVTLLSPSN--- 115 S +P + +K L I+L+ L Y + N P + L + N Sbjct: 64 ANDVKTSNAPIIHVKTDVLDIGIDLQQGDIVSSQLLAYPQSIEEKNKPFLLLQNQPNERY 123 Query: 116 -TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 + F A N + + L + + L KN + + ++ + Sbjct: 124 IASSNLFVASGQNIQALNFNFTSPQQQYELDPNQK---QLVVTLNGKNGDGLDVKKEFTF 180 Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGD---KSL 229 Y+ + + N + +++R P+ ++ F V A + Sbjct: 181 TKGSYVIDVEYKIVNQGNGEWTGYMNTQLIRSSPKEDKSSVFHVGSYTGASYSEPGKHRY 240 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + +SD+ K+++ + W+ + Y+ S +IP ++ + +++ Y Sbjct: 241 QKVSFSDMNKTNL-DVDSKGGWVAMQQHYFLSAWIPDVNSTNKFYTRAVNN---DYTIGA 296 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + IT+ P + T + L+ G + T+ P ++ +D+G +F++ +F L Sbjct: 297 VSQPITLQPSQEKTLGSKLYVGPEITSTLKGI-----APSLDLTVDYGILWFLSSLLFSL 351 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M N+VGN+G +I+L TV +KL F+ L+ Y S A M+ +QPK+ LRE++ + Sbjct: 352 MKIINNVVGNWGWSIVLVTVLIKLAFYRLSAASYKSMAGMRKLQPKLQALRERYGDDKAK 411 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + Q A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WIKDL+ AD Sbjct: 412 ISQ-ATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFILWIKDLSDAD 470 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P ++ P+IM +M IQ K++P P D QA ++ ++PV+F Sbjct: 471 PYHVL-------------------PLIMGATMLIQQKLNPAPPDPMQAKVMMFLPVLFTG 511 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 SFPAGL++YW +N +SI+QQ I + E Sbjct: 512 LFWSFPAGLVLYWIVNNTLSILQQWYITRKFSDE 545 >gi|326571816|gb|EGE21822.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis BC7] Length = 547 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 133/578 (23%), Positives = 249/578 (43%), Gaps = 48/578 (8%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + P L Sbjct: 1 MQKILRILIIIAMLITAYLLILAWRDDYAR-KPVVTQPVATQTTHADVPTTQVVGDIPSL 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 L+ + + + IN G L+ ++ S P V L + S Sbjct: 60 TAGSVADLADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLLETNS--- 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT---TPIKLVFKNANNILFERTISL 174 Y A+ + + S +L P+ + L + + + +T + Sbjct: 117 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYH-KDGLTITKTYTF 175 Query: 175 D-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT------ATNTFGVQEGFIAVLGDK 227 + Y + + NNS + ++ R + G + Sbjct: 176 NAGQYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSD 235 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+S+ + + N + W+ I Y+ S + PS SF + F + G+ Y Sbjct: 236 PYNKLKFSNFDDN--INISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGNDFY-I 290 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +++ I + GK IT + L+AG K + +D+G + I+K +F Sbjct: 291 GYNSPVINVASGKQITLNSTLYAGPKVQSEMASV-----AEGLNQTVDYGLLWPISKVLF 345 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 346 AILDNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDD- 404 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A Sbjct: 405 RMAMSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSA 464 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I PI M ++MF+Q ++P P D QA ++ +P++F Sbjct: 465 MDPWFIL-------------------PIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIF 505 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 V + FPAGL++YW+ +N+ S+ Q ++ K ++ Sbjct: 506 VVFMLWFPAGLVLYWTVNNLFSMTHQHLVNKRVERQMK 543 >gi|257455161|ref|ZP_05620399.1| inner membrane protein OxaA [Enhydrobacter aerosaccus SK60] gi|257447494|gb|EEV22499.1| inner membrane protein OxaA [Enhydrobacter aerosaccus SK60] Length = 563 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 132/595 (22%), Positives = 255/595 (42%), Gaps = 59/595 (9%) Query: 1 MERNWNYFVAIALSV---IIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAA- 55 M++ + IA+ + +++ AW++ Y + + + + P +S Sbjct: 1 MQKILRTLIIIAMLITGYLLILAWRDDYTNVNKPVAITPTTTAVSSNDVPVAGTSSTPTG 60 Query: 56 --------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + + + + IN G LR + S P Sbjct: 61 DVPTATATTPTAAPTTQKTGAQLISVMTDKYDIRINPVGGDVVYAALREQTQTLDSKQPF 120 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNA 163 V L SN Y A+ + AN I+ N + S + + + L ++ Sbjct: 121 VLLEEDSN--RVYVAQSGLIG-ANGIDNSNGRATFTAPSNQFVMQPNQAELVVPLTYQ-K 176 Query: 164 NNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGV 216 + + ++ + Y + +TNN + ++ R + + Sbjct: 177 DGVTIIKSYKFTKGQYPINVSYNITNNGTQPWQGQMYAQLKRDNSEDPGKGDKGAISLST 236 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G D+ + K+ + W+G+ Y+ + ++P + + F Sbjct: 237 YLGGAWGTPDQPYNKLKFGNFNDG--LKASSDKGWIGMVQHYFVTAWMPKD---YTAYFY 291 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 G F++N +++ P K +T T+ L+AG K + + +D+ Sbjct: 292 SREAGKDHI-IGFTSNPVSVAPNKQVTLTSALYAGPKIQTNLKPL-----AEGLDKTVDY 345 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G + I+K +F ++ + ++GN+G +I++ T+ VK+ P+A K Y S A M+ + P++ Sbjct: 346 GILWPISKVLFWILDNVHKVLGNWGWSIIVLTLLVKIALMPIANKSYHSMAKMRAVAPRL 405 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 L+E++ + + M+++YK +NP+AGC P+LLQ+P+F A+Y V+ S+++RHA Sbjct: 406 QALKEEYGDD-RMRMSQEMMRIYKEEKVNPMAGCLPVLLQMPIFLALYWVLVESVQLRHA 464 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ GWI+DL++ DP I P+IM +MF Q ++P P D Q Sbjct: 465 PWIGWIRDLSSMDPLFIL-------------------PLIMGAAMFFQQMLNPQPQDPMQ 505 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 A ++ +MP++F + FPAGL++YW+ +N+ S+ QQ I K E + R Sbjct: 506 ARVMKFMPIIFTVFMLFFPAGLVLYWTVNNLFSMAQQYFINKKVEREQAAKEAAR 560 >gi|254804276|ref|YP_003082497.1| inner membrane protein OxaA [Neisseria meningitidis alpha14] gi|254667818|emb|CBA03804.1| inner membrane protein OxaA [Neisseria meningitidis alpha14] Length = 545 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 145/582 (24%), Positives = 241/582 (41%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ + Q V + + A Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP--- 55 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + ++ I+ K L L Y N P + L + Sbjct: 56 -----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + ++L + ++ + Y Sbjct: 103 YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S S RI+R + + G + + + + +SD Sbjct: 163 LVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHA 283 ++ + S WLG+ + ++ S +I P S + + D Sbjct: 223 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGECSIDIKRRNDK 282 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y A S I G T L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ ADP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 457 DLSRADPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 539 >gi|221214579|ref|ZP_03587549.1| inner membrane protein OxaA [Burkholderia multivorans CGD1] gi|221165469|gb|EED97945.1| inner membrane protein OxaA [Burkholderia multivorans CGD1] Length = 544 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 141/499 (28%), Positives = 233/499 (46%), Gaps = 41/499 (8%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 V+ G I+ +G L L+ D +TL + + Y A + Sbjct: 72 VKFSTDVYDGEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFDHT-AGHTYLARTGLLGG- 128 Query: 131 NNIELPNSNTVWNLI---SGKILTPTTPIKLVFKNA--NNILFERTISLDE-HYLFKIVD 184 + PN N V+ + + +KL F++ + +T + Y+ + Sbjct: 129 ---DFPNHNDVYTQVNAGPTSLSGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDT 185 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 + N + + ++R T F G K + +SD++K+ Sbjct: 186 KIDNVGTTPVTPTLYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKINFSDLDKNKAD 245 Query: 244 NFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 + N W+ + Y+AS +IP + + + + Y+ I PG+S+ Sbjct: 246 YVTSADNGWIAMVQHYFASAWIPQQGVKRDIYAEKIDP--SLYRVGVKQPVAAIAPGQSV 303 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 LFAG +E + P E++ D+GW IAKP+F L+ ++ VGN+G Sbjct: 304 DVQARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGW 358 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK P Q + A+++LYKT Sbjct: 359 AIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKNDP-QKMNAALMELYKTE 417 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 418 KVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFIL-------- 469 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P++M++SM++Q ++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 470 -----------PVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYY 518 Query: 543 SWSNVISIVQQAVIMKMHG 561 +NV+SI QQ I + G Sbjct: 519 VVNNVLSIAQQYYITRKLG 537 >gi|302880138|ref|YP_003848702.1| membrane protein insertase, YidC/Oxa1 family domain containing [Gallionella capsiferriformans ES-2] gi|302582927|gb|ADL56938.1| membrane protein insertase, YidC/Oxa1 family domain containing [Gallionella capsiferriformans ES-2] Length = 541 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 153/565 (27%), Positives = 251/565 (44%), Gaps = 41/565 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-YAAVLID 59 M+ F+ + S ++ W + Y + + A I Sbjct: 1 MDFQR-LFLFLIFSFSLMMVWDGWQRYQNPPVVQQAATTKSDLPVATTKPTDLAAQAAII 59 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 +A + +++K L IN G L+ + V L + + Sbjct: 60 QQAAKVETGKIIKVKTDFLEAEINSVGGDIQRLDFIKHLDGQDKTKQFV-LFEKGSGTHN 118 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVFKNANNILFERTISLDEH 177 Y A+ + T +PN TV++ ++ +KL AN + + ++ + Sbjct: 119 YIAQSGLLGTG----MPNHTTVFSAEQDSYQLTGDKLEVKLAAVAANGMKVVKLLTFHKS 174 Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 Y+ + + N + I S +++R P + G + + + Sbjct: 175 SYVVDVAYEIENTTAAPITTSAYFQLIRDSIDPAGGSKMVPTYTGMAVYTDKEKFQKIAF 234 Query: 235 SDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 SD+EK I E N W+GI Y+ + ++P +TS + L Y A Sbjct: 235 SDVEKGKIDYPKEGDNGWIGILQHYFVAAWLPKDKTSREFFTRKLE--GDAYSAGVIVPV 292 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 I PG+ + L+AG + D P + +D+GW +A P+F +++ Sbjct: 293 AAIAPGQKAVVSMPLYAGPAQSTL------DSIAPGLGLTVDYGWLTVVATPIFWTLTFI 346 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 +V N+G+AI+L TV +KLLFFPL+ Y S A M+ + PK+++++ + + L + Sbjct: 347 QGMVQNWGVAIILLTVLIKLLFFPLSAASYRSMAKMRVVAPKLEKIKLQHADD-REKLNR 405 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 AM+ LYKT INPL GC P+L+QIPVF A+Y I S+EMR+APF+GWI DL+AADP + Sbjct: 406 AMMDLYKTEKINPLGGCLPVLIQIPVFIALYWSILASVEMRNAPFFGWITDLSAADPFFV 465 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 P++M SMF+Q K++P P D QA I+ MP+ F Sbjct: 466 L-------------------PVLMGASMFLQSKLNPVPPDPIQAKIMKIMPIAFSVVFFW 506 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++Y +N +SI QQ I + Sbjct: 507 FPAGLVLYSIVNNALSIAQQWYITR 531 >gi|294341966|emb|CAZ90395.1| Inner membrane protein oxaA [Thiomonas sp. 3As] Length = 565 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 147/584 (25%), Positives = 243/584 (41%), Gaps = 59/584 (10%) Query: 5 WNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 + + ++ +++ + ++ + P V Q + Sbjct: 4 RRSVLWVVFTMSMIFLYNSWLRYNGETDLFGTPPAHPAQVASAPTSAVPQAAPTAATPPN 63 Query: 56 VLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + LS ++ + I+ +G L Y + Sbjct: 64 IAGAAATAPLSAPVAAASAAPAAQLTTIRTDLMDVKISSRGGNLVYAKLLKY-ESRTEPG 122 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI---LTPTTPIKLVFKN 162 V L N Y A+ + + PN T ++ G T +KLV + Sbjct: 123 KNVILFD-DTPSNIYMAQSGLIGG----DFPNHETEMTVLPGPRDMGNAKTLQVKLVSPD 177 Query: 163 ANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN---TFGVQE 218 I ERT + + Y+ + +T+TN + +++R A + + Sbjct: 178 LGGIKLERTYTFTRDSYVVNVQNTITNTGSVAVAPQMYMQLVRDGNTPAGDESHFYHTYT 237 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G + ++ D+ K++ + + W+ + Y+ S ++P Sbjct: 238 GPAYYDNANKFQKFEFKDL-KTNEAPKKADSGWVAMIQHYFVSAWVPEPYEG-SRDLYTR 295 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 G Y I PGKSITT LF G + T+ P E++ D+GW Sbjct: 296 KLGDNLYAVGVIQPLSQIAPGKSITTDAKLFVGPELESTLGAL-----APGLELVKDYGW 350 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +AKP+F L+ + +V N+G +I++ T+ +KL FFPL Y S A MK + P+I+ Sbjct: 351 VTILAKPIFWLLEMIHKVVQNWGWSIIVLTLLIKLAFFPLTAASYKSMARMKAVGPRINA 410 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 LRE +K + + +AM++LY+ INPL GC PI++QIPVF A+Y V+ S+E+R AP+ Sbjct: 411 LRESYKGDQAK-MNQAMVELYRKEKINPLGGCLPIVIQIPVFIALYWVLLSSVELRGAPW 469 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DL+A DP I P IM+ + F+Q+K++P P D QA Sbjct: 470 ILWIHDLSAKDPYYIL-------------------PAIMTATSFLQVKLNPTPPDPMQAR 510 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP F FPAGL++YW +N SI QQ I K G Sbjct: 511 LMWIMPAAFSIMFFFFPAGLVLYWLTNNTTSIAQQWFINKKMGV 554 >gi|296114113|ref|YP_003628051.1| protein translocase insertase subunit YidC [Moraxella catarrhalis RH4] gi|295921807|gb|ADG62158.1| protein translocase insertase subunit YidC [Moraxella catarrhalis RH4] Length = 556 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 133/578 (23%), Positives = 249/578 (43%), Gaps = 48/578 (8%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + P L Sbjct: 10 MQKILRILIIIAMLITAYLLILAWRDDYAR-KPVVTQPVATQTTHADVPTTQVVGDIPSL 68 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 L+ + + + IN G L+ ++ S P V L + S Sbjct: 69 TAGSVADLADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLLETNS--- 125 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT---TPIKLVFKNANNILFERTISL 174 Y A+ + + S +L P+ + L + + + +T + Sbjct: 126 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYH-KDGLTITKTYTF 184 Query: 175 D-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT------ATNTFGVQEGFIAVLGDK 227 + Y + + NNS + ++ R + G + Sbjct: 185 NAGQYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSD 244 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+S+ + + N + W+ I Y+ S + PS SF + F + G+ Y Sbjct: 245 PYNKLKFSNFDDN--INISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGNDFY-I 299 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +++ I + GK IT + L+AG K + +D+G + I+K +F Sbjct: 300 GYNSPVINVASGKQITLNSTLYAGPKVQSEMASV-----AEGLNQTVDYGLLWPISKVLF 354 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 355 AILDNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDD- 413 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A Sbjct: 414 RMAMSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSA 473 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I PI M ++MF+Q ++P P D QA ++ +P++F Sbjct: 474 MDPWFIL-------------------PIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIF 514 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 V + FPAGL++YW+ +N+ S+ Q ++ K ++ Sbjct: 515 VVFMLWFPAGLVLYWTVNNLFSMTHQHLVNKRVERQMK 552 >gi|326571729|gb|EGE21742.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis BC8] gi|326574357|gb|EGE24300.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis CO72] Length = 547 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 132/578 (22%), Positives = 247/578 (42%), Gaps = 48/578 (8%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + P L Sbjct: 1 MQKILRILIIIAMLITAYLLILAWRDDYAR-KPVVTQPVATQTTHADVPTTQVVGDIPSL 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 L+ + + + IN G L+ ++ S P V L + Sbjct: 60 TAGSVADLADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLLETD---L 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT---TPIKLVFKNANNILFERTISL 174 Y A+ + + S +L P+ + L + + + +T + Sbjct: 117 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYH-KDGLTITKTYTF 175 Query: 175 DEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT------ATNTFGVQEGFIAVLGDK 227 + Y + + NNS + ++ R + G + Sbjct: 176 NAGKYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSD 235 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+S+ + + N + W+ I Y+ S + PS SF + F + G Y Sbjct: 236 PYNKLKFSNFDDN--INISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGKDFY-I 290 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +++ I + GK IT + L+AG K + +D+G + I+K +F Sbjct: 291 GYNSPVINVASGKQITLNSTLYAGPKVQSEMASV-----AEGLNQTVDYGLLWPISKVLF 345 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 346 AILDNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDD- 404 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A Sbjct: 405 RMAMSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSA 464 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I PI M ++MF+Q ++P P D QA ++ +P++F Sbjct: 465 MDPWFIL-------------------PIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIF 505 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 V + FPAGL++YW+ +N+ S+ Q ++ K ++ Sbjct: 506 VVFMLWFPAGLVLYWTVNNLFSMTHQHLVNKRVERQMK 543 >gi|325204858|gb|ADZ00312.1| inner membrane protein OxaA [Neisseria meningitidis M01-240355] Length = 545 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 144/582 (24%), Positives = 239/582 (41%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ + Q V + + A Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKPVPAPQQTAQQQAVTASAEAALAPATP--- 55 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + ++ I+ K L L Y N P + L + Sbjct: 56 -----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + ++L + ++ + Y Sbjct: 103 YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S S RI+R + + G + + + + +SD Sbjct: 163 LVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHA 283 ++ + S WLG+ + ++ S +I P S S D Sbjct: 223 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCSAGDCRIDIKRRNDK 282 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y A S I G T L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ ADP I PIIM+ +M Q ++PPP D QA ++ M Sbjct: 457 DLSRADPYYIL-------------------PIIMAATMVAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P++F FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLIFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 539 >gi|134297399|ref|YP_001121134.1| putative inner membrane protein translocase component YidC [Burkholderia vietnamiensis G4] gi|166975857|sp|A4JJ46|OXAA_BURVG RecName: Full=Inner membrane protein oxaA gi|134140556|gb|ABO56299.1| protein translocase subunit yidC [Burkholderia vietnamiensis G4] Length = 554 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 149/580 (25%), Positives = 252/580 (43%), Gaps = 52/580 (8%) Query: 1 MERNWNYFVAIALSVIIVY--AWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + + + + + A Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATQTAPAAASGASGTGATTTAGEA 60 Query: 59 DDRAQALSMSP---------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 A A + V+ G I+ +G L L+ D +T Sbjct: 61 PAAAAAGAAPATTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK-QGDGKQPDLYIT 119 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI---SGKILTPTTPIKLVFKNA--N 164 L + + Y A + + PN N V+ + + + +KL F++ Sbjct: 120 LFDHT-AGHTYLARTGLLGG----DFPNHNDVYTQLNPGATSLTGDQNTLKLSFESPVKG 174 Query: 165 NILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIA 222 + +T + Y+ + + N + + ++R T F G Sbjct: 175 GVKVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAV 234 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 K + +SD++K+ + + N W+ + Y+AS +IP + + + Sbjct: 235 YTDAKHFQKINFSDLDKNKADYVNSADNGWVAMVQHYFASAWIPQQGVKRDIYAEKIDP- 293 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + Y+ I PG+S LFAG +E + P E++ D+GW Sbjct: 294 -SLYRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGI-----APGLELVKDYGWVTI 347 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+F L+ + +VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE Sbjct: 348 IAKPLFWLLEKIHGVVGNWGWAIVLLTILIKAVFFPLSAASYKSMARMKEITPRMQALRE 407 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 +FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ W Sbjct: 408 RFKSDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILW 466 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I DL+ DP I P++M++SM++Q ++P P D QA ++ Sbjct: 467 IHDLSQRDPFFIL-------------------PVLMAVSMYVQTSLNPTPPDPVQAKMMK 507 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 508 FMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 547 >gi|332968628|gb|EGK07682.1| YidC/Oxa1 family membrane protein insertase [Kingella kingae ATCC 23330] Length = 556 Score = 425 bits (1093), Expect = e-116, Method: Composition-based stats. Identities = 140/594 (23%), Positives = 259/594 (43%), Gaps = 63/594 (10%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 F+A ALS +I+ W+ + P+++ V+ A A Sbjct: 4 KRMFIAFALSFLILMGWEQMFPRPQVQTTGANATATSQVQA----------------ASA 47 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 LS + + ++ ++ I+ K L L Y+ N V Y A+ Sbjct: 48 LSETVPITVQTDTVQAIIDEKSGDLRGLTLNQYNAAADENQKFVLF-----ADGKYLAQS 102 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIV 183 + L + S + ++L + A+ + ++ + ++ YL + Sbjct: 103 HLLDANGKNLLDGVSFSSPQKSYTLNGDKLEVRLTAQAASGVQVDKVYTFHKNSYLINVR 162 Query: 184 DTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLGD-KSLVEQKYSDIEKS 240 V N ++ +++R KP+ G + D + +SD++ Sbjct: 163 FDVKNTGSSAVKVGTSYQVVRDNSKPEGEGWFMQSYHGPVVYTPDADEFQKVTFSDLDDD 222 Query: 241 SISNFHE-------SNSWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR----YQA 287 S + ++G+ Y+ S +I P++ + +Q D R YQA Sbjct: 223 FASGKDTAEYQRKATGGYVGMIQHYFVSAWIMQPAQGDNVCAQAACTVDIKKRSEQLYQA 282 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + G + + L+AG + + P F++ D+G + A P+F Sbjct: 283 GVNVAAADVAAGATQSFGANLYAGPQVTSVLKTV-----APEFDLTKDYGRVHIFAAPLF 337 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+++ + L+GN+G AI+ T+ VK + +PL K Y S A M+ + PK++ L++++ + Sbjct: 338 ALLNWLHGLIGNWGWAIVFLTMIVKAVLYPLNDKAYKSMAKMRAVAPKMEALKKQYGED- 396 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 LQ+AM++LY+ INPL GC P+LLQ+P+F +Y +I +S+E+R AP+ GWI DL+ Sbjct: 397 RMGLQQAMMKLYRDEKINPLGGCLPMLLQMPIFIGLYWMIFLSVELRQAPWLGWITDLSR 456 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I PI+M+ +M+ Q ++PPP+D QA ++ MP++F Sbjct: 457 PDPWFIL-------------------PILMAATMWFQTTLNPPPSDPMQAQMIKIMPLIF 497 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 FPAGL++Y+ +N+++I QQ I + L + N + Sbjct: 498 SIMFFFFPAGLVLYYVINNLLTIAQQWHINRQTEMVATAPQVLDKEPNGKKNKK 551 >gi|326561739|gb|EGE12074.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis 7169] gi|326569040|gb|EGE19109.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis BC1] Length = 547 Score = 425 bits (1093), Expect = e-116, Method: Composition-based stats. Identities = 132/578 (22%), Positives = 247/578 (42%), Gaps = 48/578 (8%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + P L Sbjct: 1 MQKILRILIIIAMLITAYLLILAWRDDYAR-KPVVTQPVATQTTHADVPTTQVVGDIPSL 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 L+ + + + IN G L+ ++ S P V L + Sbjct: 60 TAGSVADLADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLLETD---L 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT---TPIKLVFKNANNILFERTISL 174 Y A+ + + S +L P+ + L + + + +T + Sbjct: 117 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYH-KDGLTITKTYTF 175 Query: 175 DEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT------ATNTFGVQEGFIAVLGDK 227 + Y + + NNS + ++ R + G + Sbjct: 176 NAGKYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSD 235 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+S+ + + N + W+ I Y+ S + PS SF + F + G Y Sbjct: 236 PYNKLKFSNFDDN--INISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGKDFY-I 290 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +++ I + GK IT + L+AG K + +D+G + I+K +F Sbjct: 291 GYNSPVINVASGKQITLNSTLYAGPKVQSEMASV-----AEGLNQTVDYGLLWPISKVLF 345 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 346 AILDNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDD- 404 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A Sbjct: 405 RMAMSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWIADLSA 464 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I PI M ++MF+Q ++P P D QA ++ +P++F Sbjct: 465 MDPWFIL-------------------PIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIF 505 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 V + FPAGL++YW+ +N+ S+ Q ++ K ++ Sbjct: 506 VVFMLWFPAGLVLYWTVNNLFSMTHQHLVNKRVERQMK 543 >gi|326575524|gb|EGE25449.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis 101P30B1] Length = 547 Score = 425 bits (1093), Expect = e-116, Method: Composition-based stats. Identities = 134/578 (23%), Positives = 248/578 (42%), Gaps = 48/578 (8%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + P L Sbjct: 1 MQKILRILIIIAMLITAYLLILAWRDDYAR-KPVVTQPVATQTTHADVPTTQVVGDIPSL 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 L+ + + + IN G L+ ++ S P V L + S Sbjct: 60 TAGSVADLADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLLETNS--- 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT---TPIKLVFKNANNILFERTISL 174 Y A+ + + S +L P+ + L + + + +T + Sbjct: 117 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYH-KDGLTITKTYTF 175 Query: 175 D-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT------ATNTFGVQEGFIAVLGDK 227 + Y + + NNS + ++ R + G + Sbjct: 176 NAGQYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSD 235 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+S+ + + N + W+ I Y+ S + PS SF + F + G Y Sbjct: 236 PYNKLKFSNFDDN--INISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGKDFY-I 290 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +++ I + GK IT + L+AG K + +D+G + I+K +F Sbjct: 291 GYNSPVINVASGKQITLNSTLYAGPKVQSEMASV-----AEGLNQTVDYGLLWPISKVLF 345 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 346 AVLDNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDD- 404 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y V+ S+E+RHAP+ GWI DL+A Sbjct: 405 RMAMSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWVLVESVELRHAPWIGWITDLSA 464 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I PI M ++MF+Q ++P P D QA ++ +P++F Sbjct: 465 MDPWFIL-------------------PIFMGMTMFVQQMLNPQPTDPMQAKMMKILPMIF 505 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 V + FPAGL++YW+ +N+ S+ Q ++ K ++ Sbjct: 506 VVFMLWFPAGLVLYWTVNNLFSMTHQHLVNKRVERQMK 543 >gi|326573504|gb|EGE23470.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis O35E] Length = 547 Score = 425 bits (1093), Expect = e-116, Method: Composition-based stats. Identities = 132/578 (22%), Positives = 247/578 (42%), Gaps = 48/578 (8%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + P L Sbjct: 1 MQKILRILIIIAMLITAYLLILAWRDDYAR-KPVVTQPVATQTTRADVPTTQVVGDIPSL 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 L+ + + + IN G L+ ++ S P V L + Sbjct: 60 TAGSVADLADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLLETD---L 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT---TPIKLVFKNANNILFERTISL 174 Y A+ + + S +L P+ + L + + + +T + Sbjct: 117 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYH-KDGLTITKTYTF 175 Query: 175 D-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT------ATNTFGVQEGFIAVLGDK 227 + Y + + NNS + ++ R + G + Sbjct: 176 NAGQYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSD 235 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+S+ + + N + W+ I Y+ S + PS SF + F + G Y Sbjct: 236 PYNKLKFSNFDDN--INISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGKDFY-I 290 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +++ I + GK IT + L+AG K + +D+G + I+K +F Sbjct: 291 GYNSPVINVASGKQITLNSTLYAGPKVQSEMASV-----AEGLNQTVDYGLLWPISKVLF 345 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 346 AILDNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDD- 404 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A Sbjct: 405 RMAMSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSA 464 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I PI M ++MF+Q ++P P D QA ++ +P++F Sbjct: 465 MDPWFIL-------------------PIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIF 505 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 V + FPAGL++YW+ +N+ S+ Q ++ K ++ Sbjct: 506 VVFMLWFPAGLVLYWTVNNLFSMTHQHLVNKRVERQMK 543 >gi|161526323|ref|YP_001581335.1| putative inner membrane protein translocase component YidC [Burkholderia multivorans ATCC 17616] gi|189348962|ref|YP_001944590.1| putative inner membrane protein translocase component YidC [Burkholderia multivorans ATCC 17616] gi|254772760|sp|A9ACA0|OXAA_BURM1 RecName: Full=Inner membrane protein oxaA gi|160343752|gb|ABX16838.1| 60 kDa inner membrane insertion protein [Burkholderia multivorans ATCC 17616] gi|189332984|dbj|BAG42054.1| preprotein translocase YidC subunit [Burkholderia multivorans ATCC 17616] Length = 553 Score = 425 bits (1093), Expect = e-116, Method: Composition-based stats. Identities = 141/499 (28%), Positives = 231/499 (46%), Gaps = 41/499 (8%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 V+ G I+ +G L L+ D +TL + + Y A + Sbjct: 81 VKFSTDVYDGEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFDHT-AGHTYLARTGLLGG- 137 Query: 131 NNIELPNSNTVWNLI---SGKILTPTTPIKLVFKNA--NNILFERTISLDE-HYLFKIVD 184 + PN N V+ + + +KL F++ + +T + Y+ + Sbjct: 138 ---DFPNHNDVYTQVNAGPTSLSGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDT 194 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 + N + + ++R T F G K + +SD++K+ Sbjct: 195 KIDNVGTTPVTPTLYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKINFSDLDKNKAD 254 Query: 244 NFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 + N W+ + Y+AS +IP + + + Y+ I PG+S Sbjct: 255 YVTSADNGWVAMVQHYFASAWIPQHGVKRDIYAEKIDP--SLYRVGVKQPVAAIAPGQSA 312 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 LFAG +E + P E++ D+GW IAKP+F L+ ++ VGN+G Sbjct: 313 DVQARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGW 367 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK P Q + A+++LYKT Sbjct: 368 AIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKNDP-QKMNAALMELYKTE 426 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 427 KVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFIL-------- 478 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P++M++SM++Q ++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 479 -----------PVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYY 527 Query: 543 SWSNVISIVQQAVIMKMHG 561 +NV+SI QQ I + G Sbjct: 528 VVNNVLSIAQQYYITRKLG 546 >gi|221201819|ref|ZP_03574856.1| inner membrane protein OxaA [Burkholderia multivorans CGD2M] gi|221207675|ref|ZP_03580683.1| inner membrane protein OxaA [Burkholderia multivorans CGD2] gi|221172521|gb|EEE04960.1| inner membrane protein OxaA [Burkholderia multivorans CGD2] gi|221178239|gb|EEE10649.1| inner membrane protein OxaA [Burkholderia multivorans CGD2M] Length = 543 Score = 425 bits (1092), Expect = e-116, Method: Composition-based stats. Identities = 141/499 (28%), Positives = 233/499 (46%), Gaps = 42/499 (8%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 V+ G I+ +G L L+ D +TL + + Y A + Sbjct: 72 VKFSTDVYDGEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFDHT-AGHTYLARTGLLG-- 127 Query: 131 NNIELPNSNTVWNLI---SGKILTPTTPIKLVFKNA--NNILFERTISLDE-HYLFKIVD 184 + PN N V+ + + +KL F++ + +T + Y+ + Sbjct: 128 ---DFPNHNDVYTQVNAGPTSLSGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDT 184 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 + N + + ++R T F G K + +SD++K+ Sbjct: 185 KIDNVGTTPVTPTLYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKINFSDLDKNKAD 244 Query: 244 NFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 + N W+ + Y+AS +IP + + + + Y+ I PG+S+ Sbjct: 245 YVTSADNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDP--SLYRVGVKQPVAAIAPGQSV 302 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 LFAG +E + P E++ D+GW IAKP+F L+ ++ VGN+G Sbjct: 303 DVQARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGW 357 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK P Q + A+++LYKT Sbjct: 358 AIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKNDP-QKMNAALMELYKTE 416 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 417 KVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYFIL-------- 468 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P++M++SM++Q ++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 469 -----------PVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYY 517 Query: 543 SWSNVISIVQQAVIMKMHG 561 +NV+SI QQ I + G Sbjct: 518 VVNNVLSIAQQYYITRKLG 536 >gi|326560696|gb|EGE11064.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis 46P47B1] Length = 557 Score = 425 bits (1092), Expect = e-116, Method: Composition-based stats. Identities = 132/578 (22%), Positives = 247/578 (42%), Gaps = 48/578 (8%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + P L Sbjct: 11 MQKILRILIIIAMLITAYLLILAWRDDYAR-KPVVTQPVATQTTHADVPTTQVVGDIPSL 69 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 L+ + + + IN G L+ ++ S P V L + Sbjct: 70 TAGSVADLADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLLETD---L 126 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT---TPIKLVFKNANNILFERTISL 174 Y A+ + + S +L P+ + L + + + +T + Sbjct: 127 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYH-KDGLTITKTYTF 185 Query: 175 DEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT------ATNTFGVQEGFIAVLGDK 227 + Y + + NNS + ++ R + G + Sbjct: 186 NAGKYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSD 245 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+S+ + + N + W+ I Y+ S + PS SF + F + G Y Sbjct: 246 PYNKLKFSNFDDN--INISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGKDFY-I 300 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +++ I + GK IT + L+AG K + +D+G + I+K +F Sbjct: 301 GYNSPVINVASGKQITLNSTLYAGPKVQSEMASV-----AEGLNQTVDYGLLWPISKVLF 355 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 356 AILDNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDD- 414 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A Sbjct: 415 RMAMSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSA 474 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I PI M ++MF+Q ++P P D QA ++ +P++F Sbjct: 475 MDPWFIL-------------------PIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIF 515 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 V + FPAGL++YW+ +N+ S+ Q ++ K ++ Sbjct: 516 VVFMLWFPAGLVLYWTVNNLFSMTHQHLVNKRVERQMK 553 >gi|94501616|ref|ZP_01308133.1| putative inner membrane protein translocase component YidC [Oceanobacter sp. RED65] gi|94426299|gb|EAT11290.1| putative inner membrane protein translocase component YidC [Oceanobacter sp. RED65] Length = 538 Score = 425 bits (1092), Expect = e-116, Method: Composition-based stats. Identities = 149/569 (26%), Positives = 251/569 (44%), Gaps = 53/569 (9%) Query: 16 IIVYAWQNFY---VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD------RAQALS 66 ++V W Y E + +Q V P ++ + + + Q + Sbjct: 1 MLVLQWNEDYGKRPTQVAEPITRLTSPVQEVDIPTDTSDADSDAPVVQDNMDAPQTQTQA 60 Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 + ++++ L I+ G L+ Y L V LL SN + Y A+ Sbjct: 61 TTEWIKVETDVLDIRIDPVGGDIVYAALKQYPLSVDQQDVPFVLLEQSNIR-TYIAQSGL 119 Query: 127 VST-----ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLF 180 V + T +NL G+ + L NN+ E+ +++ YL Sbjct: 120 VGKNGIDKKGRAQYSVEKTEYNLADGQ---DQIQVVL-ATTQNNVKIEKVFTINRGEYLI 175 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT----FGVQEGFIAVLGDKSLVEQKYSD 236 + + N S + + + + R + ++ G + + + D Sbjct: 176 DVGFRIDNQSQEPWQANFYAQFKRDRSVDPSSMESMGMASFLGAAVTRPSERYFKMDFDD 235 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 IE+ W+ Y+ ++PSK+ + Y + + + + Sbjct: 236 IEEDPFKE-KIEGGWIAFLQHYFLGAWVPSKD---EAHVYNTRKASGHYLVGYYDSALQV 291 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG T+ L+ G K+ + ++ ID+GW +++A+P+F L+ +++ Sbjct: 292 EPGTQGGTSTQLYLGPKDQDRLAEI-----AEHLDLTIDYGWLWWVAQPLFWLLQLMHDI 346 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 GN+G AI++ T+ VKL FFPL+ Y S ANM+ + PK+ ++E++ + Q L K M+ Sbjct: 347 AGNWGWAIIMLTILVKLAFFPLSAASYRSMANMRRVAPKLTAIKEQYADNREQ-LSKEMM 405 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYK INPL GC PIL+Q+PVF A+Y V+ S+E+R APF WI+DL+ DP I Sbjct: 406 NLYKKEKINPLGGCLPILVQMPVFIALYWVLMESVELRQAPFMLWIEDLSLKDPYFIL-- 463 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 P+IM SMF+QM+++P P D QA ++ MPVVF FPA Sbjct: 464 -----------------PLIMGASMFVQMQLNPTPPDPMQAKVMKLMPVVFTVFFLFFPA 506 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 GL++YW +N++SI QQ I + AE Sbjct: 507 GLVLYWVVNNLLSIAQQYYITRKIEAEAA 535 >gi|261378187|ref|ZP_05982760.1| membrane protein insertase, YidC/Oxa1 family [Neisseria cinerea ATCC 14685] gi|269145655|gb|EEZ72073.1| membrane protein insertase, YidC/Oxa1 family [Neisseria cinerea ATCC 14685] Length = 545 Score = 425 bits (1092), Expect = e-116, Method: Composition-based stats. Identities = 144/582 (24%), Positives = 247/582 (42%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ + Q V + + A Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP--- 55 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + ++ I+ K + L Y + N P L + + Sbjct: 56 -----------ITVTTDTVKAVIDEKSGDLRQMTLLKYKANGDENKPFT--LFNDSKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L N + ++L N + ++ + + Y Sbjct: 103 YVAQSELLDAQGNNILKGVNFTAAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + +TN S S RI+R + + + + G + + + +SD Sbjct: 163 LVNVRFDITNTSGKPANLSADYRIVRDRSEPEGQGYFTRSFVGPVVYTPEGKFQKVNFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHA 283 ++ + S WLG+ + ++ S +I P S + D Sbjct: 223 LDDDAKSGKNEAEYARKTQTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDN 282 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y S I G + L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ +DP I P+IM+++MF Q ++PPP D QA ++ M Sbjct: 457 DLSRSDPYYIL-------------------PVIMAVTMFAQTFLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSAMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 539 >gi|326562320|gb|EGE12646.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis 103P14B1] Length = 557 Score = 425 bits (1092), Expect = e-116, Method: Composition-based stats. Identities = 134/578 (23%), Positives = 248/578 (42%), Gaps = 48/578 (8%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + P L Sbjct: 11 MQKILRILIIIAMLITAYLLILAWRDDYAR-KPVVTQPVATQTTHADVPTTQVVGDIPSL 69 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 L+ + + + IN G L+ ++ S P V L + S Sbjct: 70 TAGSVADLADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLLETNS--- 126 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT---TPIKLVFKNANNILFERTISL 174 Y A+ + + S +L P+ + L + + + +T + Sbjct: 127 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYH-KDGLTITKTYTF 185 Query: 175 D-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT------ATNTFGVQEGFIAVLGDK 227 + Y + + NNS + ++ R + G + Sbjct: 186 NAGQYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSD 245 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+S+ + + N + W+ I Y+ S + PS SF + F + G Y Sbjct: 246 PYNKLKFSNFDDN--INISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGKDFY-I 300 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +++ I + GK IT + L+AG K + +D+G + I+K +F Sbjct: 301 GYNSPVINVASGKQITLNSTLYAGPKVQSEMASV-----AEGLNQTVDYGLLWPISKVLF 355 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 356 AVLDNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDD- 414 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y V+ S+E+RHAP+ GWI DL+A Sbjct: 415 RMAMSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWVLVESVELRHAPWIGWITDLSA 474 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I PI M ++MF+Q ++P P D QA ++ +P++F Sbjct: 475 MDPWFIL-------------------PIFMGMTMFVQQMLNPQPTDPMQAKMMKILPMIF 515 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 V + FPAGL++YW+ +N+ S+ Q ++ K ++ Sbjct: 516 VVFMLWFPAGLVLYWTVNNLFSMTHQHLVNKRVERQMK 553 >gi|161869308|ref|YP_001598475.1| putative inner membrane protein translocase component YidC [Neisseria meningitidis 053442] gi|189036354|sp|A9M152|OXAA_NEIM0 RecName: Full=Inner membrane protein oxaA gi|161594861|gb|ABX72521.1| preprotein translocase YidC subunit [Neisseria meningitidis 053442] gi|308390001|gb|ADO32321.1| putative inner membrane protein translocase component YidC [Neisseria meningitidis alpha710] gi|319409783|emb|CBY90091.1| inner-membrane protein OxaA [Neisseria meningitidis WUE 2594] gi|325129442|gb|EGC52272.1| inner membrane protein OxaA [Neisseria meningitidis OX99.30304] gi|325135498|gb|EGC58116.1| inner membrane protein OxaA [Neisseria meningitidis M0579] gi|325201458|gb|ADY96912.1| inner membrane protein OxaA [Neisseria meningitidis M01-240149] gi|325207439|gb|ADZ02891.1| inner membrane protein OxaA [Neisseria meningitidis NZ-05/33] Length = 545 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 143/582 (24%), Positives = 239/582 (41%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ + Q V + + A Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKPVPAPQQTAQQQAVTASAEAALAPATP--- 55 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + ++ I+ K L L Y N P + L + Sbjct: 56 -----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + ++L + ++ + Y Sbjct: 103 YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S S RI+R + + G + + + + +SD Sbjct: 163 LVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHA 283 ++ + S WLG+ + ++ S +I P S + D Sbjct: 223 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDK 282 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y S I G + L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ ADP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 457 DLSRADPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 539 >gi|326563097|gb|EGE13370.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis 12P80B1] Length = 557 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 133/578 (23%), Positives = 248/578 (42%), Gaps = 48/578 (8%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + M P L Sbjct: 11 MQKILRILIIIAMLITAYLLILAWRDDYAR-KPVVMQPVATQTTHADVPTTQVVGDIPSL 69 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 L+ + + + IN G L+ ++ S P V L + Sbjct: 70 TAGSVADLADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLLETD---L 126 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT---TPIKLVFKNANNILFERTISL 174 Y A+ + + S +L P+ + L + + + +T + Sbjct: 127 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYH-KDGLTITKTYTF 185 Query: 175 DEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT------ATNTFGVQEGFIAVLGDK 227 + Y + + NNS + ++ R + G + Sbjct: 186 NAGKYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSD 245 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+S+ + + N + W+ I Y+ S + PS SF + F + G Y Sbjct: 246 PYNKLKFSNFDDN--INISSKDGWVAIVQHYFVSAWTPSN--SFEADFFARTTGKDFY-I 300 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +++ I + GK IT + L+AG K + +D+G + I+K +F Sbjct: 301 GYNSPVINVASGKQITLNSTLYAGPKVQSEMASV-----AEGLNQAVDYGLLWPISKVLF 355 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 356 AILDNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGDD- 414 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A Sbjct: 415 RMAMSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSA 474 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I PI M ++MF+Q ++P P D QA ++ +P++F Sbjct: 475 MDPWFIL-------------------PIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIF 515 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 V + FPAGL++YW+ +N+ S+ Q ++ K ++ Sbjct: 516 VVFMLWFPAGLVLYWTVNNLFSMTHQHLVNKRVERQMK 553 >gi|325127482|gb|EGC50411.1| inner membrane protein OxaA [Neisseria meningitidis N1568] Length = 545 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 143/580 (24%), Positives = 240/580 (41%), Gaps = 60/580 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ + Q V + + A Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKPVPAPQQATQQQAVTASAEAALAPATP--- 55 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + ++ I+ K L L Y + P V L + Sbjct: 56 -----------ITVTTDTVQAVIDEKSGDLRQLTLLQYKATGDEHKPFV--LFNDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + ++L + ++ + Y Sbjct: 103 YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S S RI+R + + G + + + + +SD Sbjct: 163 LVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHA 283 ++ + S WLG+ + ++ S +I P S + D Sbjct: 223 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDK 282 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y S I G + L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ +DP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 457 DLSRSDPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQ 537 >gi|78067989|ref|YP_370758.1| putative inner membrane protein translocase component YidC [Burkholderia sp. 383] gi|123567331|sp|Q39BQ2|OXAA_BURS3 RecName: Full=Inner membrane protein oxaA gi|77968734|gb|ABB10114.1| protein translocase subunit yidC [Burkholderia sp. 383] Length = 555 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 139/503 (27%), Positives = 233/503 (46%), Gaps = 41/503 (8%) Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 + V+ G I+ +G L L+ D +TL + + Y A Sbjct: 79 QAQLVKFSTDVYDGEIDTRGGTLAKLTLKK-QGDGKQPDLYITLFDHT-AGHTYLARSGL 136 Query: 127 VSTANNIELPNSNTVWNLI---SGKILTPTTPIKLVFKNA--NNILFERTISLDE-HYLF 180 + + PN N V+ + + + +KL F++ + +T + Y+ Sbjct: 137 LGG----DFPNHNDVYTQLNPGTTSLTGDQNALKLSFESPVKGGVKVVKTYTFTRGSYVI 192 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEK 239 + + N + + ++R T F G K + +SD++K Sbjct: 193 GVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKINFSDLDK 252 Query: 240 SSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + + N W+ + Y+AS +IP + + + Y+ I P Sbjct: 253 NKADYVTSADNGWVAMVQHYFASAWIPQQGVKRDIYAEKIDP--TLYRVGVKQPVAAIAP 310 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G+S LFAG +E + P E++ D+GW IAKP+F L+ ++ +G Sbjct: 311 GQSADVQARLFAGPEEERMLEGI-----APGLELVKDYGWVTIIAKPLFWLLEKIHSYIG 365 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK P Q + A+++L Sbjct: 366 NWGWSIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDP-QKMNSALMEL 424 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP I Sbjct: 425 YKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPFFIL---- 480 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 P++M++SM++Q ++P P D QA ++ +MP+ F FPAGL Sbjct: 481 ---------------PVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGL 525 Query: 539 IIYWSWSNVISIVQQAVIMKMHG 561 ++Y+ +NV+SI QQ I + G Sbjct: 526 VLYYVVNNVLSIAQQYYITRKLG 548 >gi|332531205|ref|ZP_08407118.1| membrane protein insertase, yidc/oxa1 family domain containing [Hylemonella gracilis ATCC 19624] gi|332039312|gb|EGI75725.1| membrane protein insertase, yidc/oxa1 family domain containing [Hylemonella gracilis ATCC 19624] Length = 571 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 145/593 (24%), Positives = 250/593 (42%), Gaps = 63/593 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY---PRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M + + IV W + ++ P + + V Q S Sbjct: 1 MNDIRRTILWVIFGFSIVLLWDQWQIHNGRPATFFPSPTAAVAKPVAPAEQTPVSAQNPE 60 Query: 58 IDDRAQALSMS--------------------PRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + Q + RV + L + + +G + Sbjct: 61 VPQARQLATTGVDGGVAAIQAAAQAVSSLPRERVTVSTDVLKLTFDTEGGSLVRSEFLRH 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPT 153 H +P+V L + Y ++ + A +LP TV L+S + T Sbjct: 121 HESHDVQTPVV--LFDESKDRVYLSQTGLIGGA---DLPTHKTVMKLVSSERELRDGADT 175 Query: 154 TPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTA 210 ++ + + +T +L Y + V N + + +++R K Sbjct: 176 LKVQFESPVSGGVQLLKTYTLQRGSYAVDVKHEVRNVGQESVTPQVYLQLVRDGNKIPGG 235 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKET 269 ++ + G K + + DIEK + +N ++ + Y+AS ++ + Sbjct: 236 SSFYSTFTGPAVYTEAKKYHKVDFGDIEKGKADFDKESTNGYVAMVQHYFASAWLLADGV 295 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + +S+ Y A + PG + LF G +E + P Sbjct: 296 QREIFVRKVSNN--LYAVGMIAPLQALAPGATRVLDARLFVGPQEEKQLEAL-----APG 348 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E++ D+GW +AKP++ L+ ++L+ N+G +I+ V +K+ F+ L K Y S A M Sbjct: 349 LELVKDYGWLTILAKPLYWLLDKLHDLLHNWGWSIVALVVLLKIAFYWLNAKAYASMAKM 408 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K I P+I E+R++ K PQ +Q+ M+++Y+ +NPL GC PI++QIPVF A+Y V+ Sbjct: 409 KAIAPRITEMRDRLK-DKPQQMQQEMMRIYRDEKVNPLGGCLPIMIQIPVFIALYWVLLS 467 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+EMR+AP+ WIKDL+ DP I P++M+L+ +Q ++P Sbjct: 468 SVEMRNAPWILWIKDLSTQDPYYIL-------------------PLLMTLTTMLQTALNP 508 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P D QA ++ MP+VF FPAGL++YW +NV+SI QQ VI K G Sbjct: 509 APPDPMQAKLMWIMPLVFSVMFFFFPAGLVLYWVTNNVLSIAQQWVINKRMGV 561 >gi|218767519|ref|YP_002342031.1| putative inner membrane protein translocase component YidC [Neisseria meningitidis Z2491] gi|38503190|sp|Q9JW48|OXAA_NEIMA RecName: Full=Inner membrane protein oxaA gi|121051527|emb|CAM07824.1| putative integral membrane protein [Neisseria meningitidis Z2491] Length = 545 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 143/582 (24%), Positives = 239/582 (41%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ + Q V + + A Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKPVPAPQQTAQQQAVTASAEAALAPATP--- 55 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + ++ I+ K L L Y N P + L + Sbjct: 56 -----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + ++L + ++ + Y Sbjct: 103 YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S S RI+R + + G + + + + +SD Sbjct: 163 LVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHA 283 ++ + S WLG+ + ++ S +I P S + D Sbjct: 223 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDK 282 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y S I G + L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ ADP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 457 DLSRADPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVINNLLTIAQQWHINRSIEKQRA 539 >gi|239818257|ref|YP_002947167.1| 60 kDa inner membrane insertion protein [Variovorax paradoxus S110] gi|239804834|gb|ACS21901.1| 60 kDa inner membrane insertion protein [Variovorax paradoxus S110] Length = 565 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 156/588 (26%), Positives = 258/588 (43%), Gaps = 53/588 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY--------------PRIEEMNNERKNIQTVKQP 46 M + + +V W + V+ P Sbjct: 1 MNDIRRTILWVIFGFSLVLLWDQWQVFNGNKPTFLPSSKPAAVASAPAGAAAPAAGNGVP 60 Query: 47 NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + + +A + +A A + +V + I+ +GA + L L Y + + Sbjct: 61 SASAATGSAGAVPTQAAAAAPREQVNVTTDLFKAVIDSEGATVNYLELLKYDE--ADRTK 118 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISG--KILTPTTPIKLVFKNA 163 V L ++ Y A+ ++ ++ E PN T +G ++ +++ F++A Sbjct: 119 HVVLFENASPATRYVAQTGLLNPVDSGERFPNHLTPMAPKAGPREMAEGQNTLEVSFESA 178 Query: 164 --NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QE 218 + + +T Y + V N S +++RH A FG Sbjct: 179 PVGGLKYVKTYVFKRGDYAIGVRHEVVNVSDQPRDAQLYMQLLRHGTVAAGTMFGTNTFT 238 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKE---TSFHSQ 274 G A +K + + DI K I +N W+ + Y+AS ++ + + Sbjct: 239 GPAAYTNEKKFHKLDFKDIAKGKIEPPPPANDGWIAMVQHYFASAWLLKGDPASEQLRRE 298 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 F+ G Y A I PG + + LFAG +E + P +++ Sbjct: 299 FRVKDLGDNLYTVAMVATLPKIAPGATQVVNSALFAGPEEEKKLEAI-----APGLDLVK 353 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+G F I+KP++ L++ + ++GN+G AI+ V +K F+ L K Y S A MK I P Sbjct: 354 DYGIFAIISKPLYWLLTQLHGILGNWGWAIVALVVLLKAAFYWLNAKAYASMAKMKAINP 413 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 KI E+RE+ K PQ +Q+ M+++YKT +NP+ GC+PI++QIPVF A+Y V+ S+EMR Sbjct: 414 KIMEMRERLK-DKPQEMQQEMMRIYKTEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMR 472 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 HAP+ GWI DL+A DP I P++M+L+ Q ++P P D Sbjct: 473 HAPWIGWITDLSAPDPWYIL-------------------PVVMTLTSLFQTWLNPTPPDP 513 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP+ F FPAGL++YW +NV+SI QQ I K G Sbjct: 514 MQAKLMWIMPLAFSVMFIFFPAGLVLYWITNNVLSIAQQWFINKRLGV 561 >gi|15677738|ref|NP_274901.1| putative inner membrane protein translocase component YidC [Neisseria meningitidis MC58] gi|121634185|ref|YP_974430.1| putative inner membrane protein translocase component YidC [Neisseria meningitidis FAM18] gi|38503191|sp|Q9JXS4|OXAA_NEIMB RecName: Full=Inner membrane protein oxaA gi|166975876|sp|A1KRZ8|OXAA_NEIMF RecName: Full=Inner membrane protein oxaA gi|7227164|gb|AAF42237.1| 60 kd inner-membrane protein [Neisseria meningitidis MC58] gi|120865891|emb|CAM09627.1| putative integral membrane protein [Neisseria meningitidis FAM18] gi|316985524|gb|EFV64471.1| 60Kd inner membrane family protein [Neisseria meningitidis H44/76] gi|325131545|gb|EGC54252.1| inner membrane protein OxaA [Neisseria meningitidis M6190] gi|325133546|gb|EGC56209.1| inner membrane protein OxaA [Neisseria meningitidis M13399] gi|325139200|gb|EGC61746.1| inner membrane protein OxaA [Neisseria meningitidis ES14902] gi|325141536|gb|EGC64005.1| inner membrane protein OxaA [Neisseria meningitidis 961-5945] gi|325143618|gb|EGC65937.1| inner membrane protein OxaA [Neisseria meningitidis M01-240013] gi|325197597|gb|ADY93053.1| inner membrane protein OxaA [Neisseria meningitidis G2136] gi|325200959|gb|ADY96414.1| inner membrane protein OxaA [Neisseria meningitidis H44/76] gi|325206814|gb|ADZ02267.1| inner membrane protein OxaA [Neisseria meningitidis M04-240196] Length = 545 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 143/582 (24%), Positives = 240/582 (41%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ + Q V + + A Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP--- 55 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + ++ I+ K L L Y N P + L + Sbjct: 56 -----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + ++L + ++ + Y Sbjct: 103 YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S S RI+R + + G + + + + +SD Sbjct: 163 LVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHA 283 ++ + S WLG+ + ++ S +I P S + + D Sbjct: 223 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGRQSVCAAGECNIDIKRRNDK 282 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y S I G + L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ ADP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 457 DLSRADPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 539 >gi|261393238|emb|CAX50861.1| inner-membrane protein OxaA [Neisseria meningitidis 8013] Length = 545 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 144/580 (24%), Positives = 240/580 (41%), Gaps = 60/580 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ + Q V + + A Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP--- 55 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + ++ I+ K L L Y N P + L + Sbjct: 56 -----------ITVTTDTVQAVIDEKSGDLRQLTLLKYKATGDENKPFI--LFGDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + ++L + ++ + Y Sbjct: 103 YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S S RI+R + + G + + + + +SD Sbjct: 163 LVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHA 283 ++ + S WLG+ + ++ S +I P S + + D Sbjct: 223 LDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGECSIDIKRRNDK 282 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y A S I G T L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRVAAPKLQAIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ ADP I PIIM+ +M Q ++PPP D QA ++ M Sbjct: 457 DLSRADPYYIL-------------------PIIMAATMVAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQ 537 >gi|325139560|gb|EGC62100.1| inner membrane protein OxaA [Neisseria meningitidis CU385] Length = 545 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 146/582 (25%), Positives = 247/582 (42%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ + Q V + + A Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP--- 55 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + ++ I+ K + L Y + + N P L + + Sbjct: 56 -----------ITVTTDTVKAVIDEKSGDLRQMTLLKYKANGNENKPFS--LFDDSKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L N + ++L N + ++ + + Y Sbjct: 103 YVAQSELLDAQGNNILKGVNFTAAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + +TN S S RI+R Q + + G + + + +SD Sbjct: 163 LVNVRFDITNTSGKPANLSADYRIVRDHSQPEGQGYFTRSYLGPVVYTPEDKFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHA 283 ++ + S WLG+ + ++ S +I P S + D Sbjct: 223 LDDDAKSGKNEAEYARKTQTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDN 282 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y S I G + L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSTSVSVPLAAIQNGTKSEASINLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ +DP I PIIM+++MF Q ++PPP D QA ++ M Sbjct: 457 DLSRSDPYYIL-------------------PIIMAVTMFAQTFLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVVNNLLTITQQWHINRSIEKQRA 539 >gi|329894825|ref|ZP_08270625.1| OxaI/YidC membrane insertion protein [gamma proteobacterium IMCC3088] gi|328922719|gb|EGG30053.1| OxaI/YidC membrane insertion protein [gamma proteobacterium IMCC3088] Length = 554 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 156/582 (26%), Positives = 266/582 (45%), Gaps = 59/582 (10%) Query: 1 MERNW-NYFVAIA-LSVIIVYAW---------QNFYVYPRIEEMNNERKNIQTVKQPNQV 49 M+ AIA LS +++ W Q + P + + + P+ + Sbjct: 1 MDIQRYALIGAIAVLSWMLLTEWVIFKDKATEQQAVMTPAFAPSESVSLDDSSSDIPSII 60 Query: 50 DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS-PIV 108 D S + L A + + + +L+ +I+L+G LR Y + S P V Sbjct: 61 DASDESSLGLSNATNQGV---INVTTDTLVATIDLQGGDIVYAGLRDYLAKIDDPSNPFV 117 Query: 109 TLLSPSNTKNAYFAELDYVSTAN-----NIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 L N + Y A+ + + + + L + T +KL + Sbjct: 118 LL--EQNARRVYVAQSGLIGPDGVDSKARAQYRSEEANYALADDQA---TLSVKLYHTDN 172 Query: 164 NNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH---KPQTATNTFGVQEG 219 + + + +L + ++N+ + G++ R P + + G+ Sbjct: 173 AGLSVVKEFVFNRGTHLIDVNYQLSNSDVKSKTVYLFGQLKRDSSADPSSENSGMGLAPF 232 Query: 220 FIAVLG--DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 A D + + D+ + SW+ + Y+ S +IP+ + + Sbjct: 233 LGAATSNADDRFKKFNFKDMLEEPYK-AQTQGSWIALIQHYFLSAWIPNPDKIHTYTTRV 291 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 DG A F + + PG + TT+ L+ G K+ T+ P E+ +D+G Sbjct: 292 TKDGFNI--AGFLSPATVVAPGATATTSAQLYVGPKDQYTLEKIS-----PFLELSVDYG 344 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++IA+P+F L++ + LVGN+G+AI+L TV +K FF L+ Y S ANM+ +QPK+ Sbjct: 345 WLWWIAQPLFWLLTKIHGLVGNWGVAIILLTVLIKGAFFKLSAASYRSMANMRRVQPKMA 404 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ++RE++ Q +AM++LYK INP+ GC PIL+Q+PVF A+Y + S+E+RHAP Sbjct: 405 DIREQYADDK-QKQSQAMMELYKKEKINPMGGCLPILVQMPVFIALYWTLMESVELRHAP 463 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F WI DL+ DP + PI+M SM+ K++PPP D QA Sbjct: 464 FALWINDLSVMDPYFVL-------------------PILMGASMWFMQKLNPPPPDPMQA 504 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ W+P+VF F FPAGL++YW +N++S+ QQ +I K Sbjct: 505 KLMQWLPIVFTFFFLWFPAGLVLYWVVNNLLSMTQQYIITKQ 546 >gi|254496743|ref|ZP_05109602.1| inner membrane protein, 60 kDa [Legionella drancourtii LLAP12] gi|254354038|gb|EET12714.1| inner membrane protein, 60 kDa [Legionella drancourtii LLAP12] Length = 558 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 151/584 (25%), Positives = 265/584 (45%), Gaps = 55/584 (9%) Query: 5 WNYFVAIALSVIIVYAWQNFYV-YPRIEEMNNERKNIQTVKQP-----NQVDNSYAAVLI 58 +AL+++ + W + V YP + N Q +P NS A L+ Sbjct: 4 RRIISYMALALVSLSLWNAWQVDYPPQQTTVANSSNQQRTDEPLLPEMGTSGNSAGATLV 63 Query: 59 DDRAQAL--SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS-SNSPIVTLLSPSN 115 + A+ +P V++K L +I+L+ L Y L V N P L +N Sbjct: 64 NPVAEQTRTQSAPLVQVKTDVLNVAIDLQQGDIVSGQLLDYPLSVDEKNKPFPLLQDDAN 123 Query: 116 TKNAYFAELDYVSTAN------NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 + Y A + A + + L + + + L K + + Sbjct: 124 ER--YVANSNLFIAAGQAVKALDFAFTTEQPQYELAANQ---NQLVVTLNGKEDD-LAVS 177 Query: 170 RTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGD- 226 + YL + + N + + +++R P+ ++ F V A + Sbjct: 178 KEFIFTKGSYLIDVNYKIVNKGSSEWKGYMNTQLLRSSPKEDKSSVFHVGSYTGASYSEP 237 Query: 227 --KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 + +SD+ K+++ + + W+ + Y+ S +IP + + + + Sbjct: 238 GKHHYQKVSFSDMGKANL-DVDSNGGWIAMQQHYFLSAWIPDAQGRNKFYTRSI---NGD 293 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y + I + P + T L+ G + + P ++ +D+G +F++ Sbjct: 294 YTIGAVSQPIVVQPQEQKTVGAKLYVGPEITSVLKGI-----APSLDLTVDYGILWFVSS 348 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F LM + YN+VGN+G +I+L TV +KL F+ L+ Y S A M+ +QPK+ LRE++ Sbjct: 349 LLFSLMKWIYNVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMAGMRKLQPKLQALRERYG 408 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 ++ Q A ++LYK +NPL GC PI++QIPVF A+Y V+ S+E+R APF WIKD Sbjct: 409 DDKAKISQ-ATMELYKQEKVNPLGGCLPIVIQIPVFIALYWVLLESVELRQAPFIFWIKD 467 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 LA+ADP ++ P+IM +M IQ K++P P D QA ++ ++P Sbjct: 468 LASADPFHVL-------------------PLIMGATMLIQQKLNPAPPDPMQAKVMMFLP 508 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 V+F +FPAGL++YW +N +SI+QQ I + + E + Sbjct: 509 VLFTGLFWNFPAGLVLYWIVNNTLSILQQWYITRKYADEKPVKK 552 >gi|78486534|ref|YP_392459.1| 60 kDa inner membrane insertion protein [Thiomicrospira crunogena XCL-2] gi|78364820|gb|ABB42785.1| protein translocase subunit yidC [Thiomicrospira crunogena XCL-2] Length = 551 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 137/576 (23%), Positives = 249/576 (43%), Gaps = 47/576 (8%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK---------QPNQVDNSYA 54 N F +AL+ +++ W + + + + + P+ Sbjct: 2 NMRSFWWLALAFTLLWIWMQWTQFQHKASLPPQTAAVTQQTDKGMETPEINPDVPTAHQT 61 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + + + R+ +K L I+ +G D+ L Y + P + Sbjct: 62 MEDVPTAKAKIKQAQRISVKTDVLDIVIDTQGGDIRDVKLLKYAATDDRSQPFRLM--GD 119 Query: 115 NTKNAYFAELDYVSTANNI-ELPNSNTVWNLISG--KILTPTTPIKLVFKNANNILFERT 171 + Y A+ + + P +++ ++ T + L ++ + + +T Sbjct: 120 TGQMMYVAQNGIALQSKAVLPAPTHKSLYQASQTHYEMTGDTLTVPLTWEQ-DGVKVTKT 178 Query: 172 ISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLG--DK 227 + Y+ + + N + + +++R+ N G + G + Sbjct: 179 YVFTKGKYVIGLNYKIDNTTQKEWAGGLYSQLVRNTYDPDHNAMMYTYTGPVLYDGHAES 238 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + D+ K I + W + Y+ S IP +E+ K L+DG Y A Sbjct: 239 KYNKHSFDDLSKQPIQGIQTTGGWAAMIQHYFMSAVIPDQESQNRYYAKPLNDGE--YVA 296 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 T+ G+S T ++ L+ G + P E+ +D+G IA+P+F Sbjct: 297 GVVEPMETVAAGQSQTLSSELYIGPIIQDNLEKI-----APGLELTVDYGVLTIIAEPIF 351 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ + LVGN+G +I+L TV +KLLF+ L++ Y S A +K QPK+ +L+E + Sbjct: 352 WVLEKIHALVGNWGWSIILLTVLIKLLFYKLSETSYRSMARLKKFQPKLKQLKENYGDDK 411 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + Q+ M++LYK INPL GC PIL+Q+PVF A+Y V+ S EMR AP+ WI DL+ Sbjct: 412 V-IFQQKMMKLYKEEKINPLGGCLPILVQMPVFIALYWVLLYSAEMRQAPWILWIDDLSV 470 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-PADKGQAMILNWMPVV 526 DP I P++M +SM++Q K++P D+ Q ++ +P + Sbjct: 471 KDPYFIL-------------------PVLMGISMWVQQKLNPSAMMDEMQQKVMKALPFI 511 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F FPAGL++YW +N++S+ QQ I + A Sbjct: 512 FTIFFMFFPAGLVLYWVVNNILSVSQQWYITRKIEA 547 >gi|87122922|ref|ZP_01078787.1| inner membrane protein, 60 kDa [Marinomonas sp. MED121] gi|86161795|gb|EAQ63095.1| inner membrane protein, 60 kDa [Marinomonas sp. MED121] Length = 547 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 150/574 (26%), Positives = 256/574 (44%), Gaps = 46/574 (8%) Query: 5 WNYFVAIALSVI---IVYAWQNFY---VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 YF+ AL V+ + W Y + + ++ P+ A+ I Sbjct: 4 RRYFLWGALFVVGYMLFLQWNQDYGSVATSNVAQTTQTQEASNNTDLPSTAAAPVASNDI 63 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A+ + + + +LI SI+ G +L Y +SN P V L + + Sbjct: 64 VVDAKLPASDTLIRVVTDALIVSIDPVGGDIVKASLPEYKKAQASNEPFVLL--DNGIER 121 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFERTISL 174 Y + V + V+ + + + + L F + + + + +T + Sbjct: 122 IYVTQSGLVGPNGPDASKDGRPVYRVEQSEFKLGDGEDSLAVNLYFTDVHGVQYTKTFTF 181 Query: 175 DEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKP--QTATNTFGVQEGFIAVLGDKS--L 229 + + TV NNS + + +I R +A++ G+Q + + Sbjct: 182 QRGEFAVRQQITVDNNSNAAWQGNLFAQIKRDNTEDPSASSGMGLQPYLGGAISTEENPY 241 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + +SD+ +S + + W+ + Y+ S ++P + + + F Sbjct: 242 TKVSFSDMAESP-TKITTTGGWIALLQHYFVSAWVPDSNQKATLYTRQKGEFN---IIGF 297 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + + I G T ++ L+ G K + + P E+ +D+GW +++A+P+F L Sbjct: 298 TGPSVEIAAGTQGTLSSTLYIGPKLQDQLS-----VTAPNLELTVDYGWLWWLAQPLFWL 352 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 ++ + V N+G+AI+L V VK LFF L+ Y S A M+ P++ LRE+ Q Sbjct: 353 LTAIQSFVINWGVAIILVVVVVKALFFKLSAASYRSMAKMRKFGPELTRLREQHGDD-RQ 411 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+E+RHAPF WI DL+A D Sbjct: 412 KMSAAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLMESVELRHAPFMLWINDLSAMD 471 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P + PI+M +SM Q ++P P D QA I+ MP+ F F Sbjct: 472 PYFVL-------------------PILMGISMLGQQMLNPTPPDPMQARIMKIMPIAFTF 512 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW +N +SI+QQ VI K E Sbjct: 513 FFLWFPSGLVLYWVVNNTLSILQQYVITKRIERE 546 >gi|304388454|ref|ZP_07370560.1| YidC/Oxa1 family membrane protein insertase [Neisseria meningitidis ATCC 13091] gi|304337571|gb|EFM03734.1| YidC/Oxa1 family membrane protein insertase [Neisseria meningitidis ATCC 13091] Length = 545 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 143/582 (24%), Positives = 239/582 (41%), Gaps = 60/582 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL +I+ W+ + P+ + Q V + + A Sbjct: 1 MDFKRLTAFFAIAL--VIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP--- 55 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + ++ I+ K L L Y N P + L + Sbjct: 56 -----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYT 102 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + ++L + ++ + Y Sbjct: 103 YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSY 162 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSD 236 L + + N S S RI+R + + G + + + + +SD Sbjct: 163 LVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSD 222 Query: 237 IEKSSISN-------FHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHA 283 ++ + S WLG+ + ++ S +I P S + D Sbjct: 223 LDNDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDK 282 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y S I G + L+AG + I + +L ++ D+G ++ A Sbjct: 283 LYSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 338 SPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKY 397 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI Sbjct: 398 GDD-RMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWIT 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ ADP I PIIM+ +MF Q ++PPP D QA ++ M Sbjct: 457 DLSRADPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIM 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+VF FPAGL++YW +N+++I QQ I + + Sbjct: 498 PLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 539 >gi|241767065|ref|ZP_04764844.1| YidC translocase/secretase [Acidovorax delafieldii 2AN] gi|241362388|gb|EER58355.1| YidC translocase/secretase [Acidovorax delafieldii 2AN] Length = 495 Score = 421 bits (1083), Expect = e-115, Method: Composition-based stats. Identities = 133/502 (26%), Positives = 225/502 (44%), Gaps = 41/502 (8%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 RVE+ S + +G L + + LL + + Y A+ + Sbjct: 17 ERVEVTTDVYRLSFDSEGGSLTHAELLKHVDMADKSRNF--LLFDESAERVYVAQTGLIG 74 Query: 129 TANNIELPNSNTVWNLISG----KILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIV 183 + P TV ++ G K I+ + + +T +L Y + Sbjct: 75 GS----YPTHKTVMKVVPGPRALKDGENELSIRFESPDLGGVKLVKTWTLKRGSYDMAVA 130 Query: 184 DTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 V N + +++R KP ++ + G K + ++ IE+ Sbjct: 131 HEVVNTGSSPVSPQLYLQLVRDGNKPPGESSFYSTFTGPAVYTDAKKYQKVEFKKIEEGK 190 Query: 242 IS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 +N ++ + Y+AS ++ + + Y I PG Sbjct: 191 AEIEKSATNGYVAMVQHYFASAWLLGDGVQRELFMRKVDTN--LYSVGMITPVGEIAPGA 248 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 S T LFAG + T+ P E++ D+GW +AKP++ L+ + L+GN+ Sbjct: 249 SKTVQAQLFAGPQVEKTLEALT-----PGLELVKDYGWLTILAKPLYWLLDQLHKLLGNW 303 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G +I+ + +K+ F+ L K Y S A MK I PKI E+RE+ K PQ +Q+ M+++Y+ Sbjct: 304 GWSIVGLVLLLKIAFYWLNAKAYASMAKMKAINPKITEMRERLK-DKPQQMQQEMMRIYR 362 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP+ GC+PI++QIPVF A+Y V+ S+EMR+AP+ GWI DL+ DP I Sbjct: 363 EEKVNPMGGCFPIMIQIPVFIALYWVLLSSVEMRNAPWIGWIHDLSTPDPYFIL------ 416 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 P++M+ S +Q ++P P D QA ++ +MP++F FPAGL++ Sbjct: 417 -------------PLLMTASSLLQTALNPAPPDPMQAKMMWFMPLIFSVMFFFFPAGLVM 463 Query: 541 YWSWSNVISIVQQAVIMKMHGA 562 YW +N++SI QQ +I G Sbjct: 464 YWLTNNILSIAQQWIINTRMGV 485 >gi|260221779|emb|CBA30684.1| Inner membrane protein oxaA [Curvibacter putative symbiont of Hydra magnipapillata] Length = 565 Score = 421 bits (1083), Expect = e-115, Method: Composition-based stats. Identities = 139/584 (23%), Positives = 246/584 (42%), Gaps = 51/584 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNERKNIQTVKQPNQVD 50 M + + +V W F+ P + + + Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDQWQIHNGKQATFFPNPAQKAASAPAPAVSASAGVPVAP 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + + A AL+ S R E+ L + + G Y + V L Sbjct: 61 VAAGQAPVSTSAPALA-SERFEVSTDVLKLTFDTLGGSLVRSEFLQYLDSNDKSRNFVLL 119 Query: 111 LSPSNTKNAYF-AELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPIKLVFKNANNI 166 +TK+ Y+ A+ + A P +V + K L I ++ I Sbjct: 120 ---DDTKDRYYQAQTGLIGGAAPDSFPTHKSVMAVSGDKSLKDGQDELKIVFTSQDTGGI 176 Query: 167 LFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAV 223 +T +L Y + V N + +++R KP ++ + G Sbjct: 177 KLVKTYTLRRGAYDIAVKHEVVNTGATALNPQLYLQLVRDGNKPAGESSFYSTFTGPAVY 236 Query: 224 LGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 K + ++S I+K + SN ++ + Y+AS +I + G Sbjct: 237 TDLKKYQKVEFSAIKKGNADFEKESSNGYIAMVQHYFASAWILPADEKRTFSLDAKDVGA 296 Query: 283 AR----YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 Y+A + PG++ LF G +E + P E++ D+GW Sbjct: 297 TVADCCYRATMITPLEAVAPGQTKAVEAKLFVGPQEEKKLEAL-----APGMELVKDYGW 351 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +AKP++ L+ ++ + N+G +I+ + +K+ F+ L K Y S A MK + P+I E Sbjct: 352 LTILAKPLYWLLDKLHSFIQNWGWSIVALVLLLKIAFYWLNAKAYASMAKMKAVNPRIME 411 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +RE+ K +P Q +Q+ M+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+EMR+AP+ Sbjct: 412 MRERLKDNPQQ-MQQEMMKIYREEKVNPMGGCFPIMIQIPVFIALYWVLLSSVEMRNAPW 470 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DL++ DP I P++M+L+ +Q ++P P D QA Sbjct: 471 VMWIHDLSSPDPYFIL-------------------PVVMTLTTLLQTALNPAPPDPLQAK 511 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP+ F FP+GL++YW +N++SI QQ +I G Sbjct: 512 MMWIMPLAFSVMFFFFPSGLVLYWITNNILSIAQQWIINTRMGV 555 >gi|220936473|ref|YP_002515372.1| protein translocase subunit YidC [Thioalkalivibrio sp. HL-EbGR7] gi|254778168|sp|B8GRD1|OXAA_THISH RecName: Full=Inner membrane protein oxaA gi|219997783|gb|ACL74385.1| protein translocase subunit YidC [Thioalkalivibrio sp. HL-EbGR7] Length = 557 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 134/565 (23%), Positives = 245/565 (43%), Gaps = 46/565 (8%) Query: 11 IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN------SYAAVLIDDRAQA 64 + + +I AW Y + + + + P + S A + A A Sbjct: 13 LLVLFLIWQAWNRDYGPQPVAAPGAQEQVMDRDGVPAPPQDVPDAPVSEAVDAPTEVAPA 72 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 R+ + L I+ +G +L Y + + + + LL Y A+ Sbjct: 73 EPDRRRIRVVTDVLDIEIDTRGGDLVRADLPTYPVSLRTPDQPIRLLDERF--RQYVAQS 130 Query: 125 DYV-----STANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD 175 + + P+ + ++ + + L + + + + +T + Sbjct: 131 GLIHDRVPGVSGEGRAPSHHAIFQAERDEFRLADGQDELRVPLTWTSEDGVQVTKTYTFR 190 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 +L + V NNS +I RH + ++ + D + Sbjct: 191 RGDFLINVDHAVRNNSDQPWVGRQYRQI-RHGSTPSRESWFLYTFTGVAYHDGRYEKLSL 249 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANE 293 D+ + W+ I Y+ + ++P + + L + + Sbjct: 250 EDMAGKPLDK-DVQGGWISIIQHYFLTAWVPFEHEINQFYTRVLGTPARPEHIIGMRSEA 308 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 T PG+ T+ + G KE + + P E+ +D+G F+AKP+F ++ + Sbjct: 309 QTAAPGEETVFTSRFWVGPKEQAALKAIQ-----PGLELTVDYGMLSFLAKPLFWVLDWI 363 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 +N+VGN+G AI++ T+ +KL+F+ L++ Y S A M+ +QPK+ +L++++ Q + + Sbjct: 364 HNVVGNWGWAIIILTILIKLVFYKLSETSYRSMAKMRAVQPKMMQLKDRYGDDK-QRMNQ 422 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A+++LYK INPL GC PIL+QIPVF A+Y V+ S+EMR AP+ WI+DL+ DP I Sbjct: 423 ALMELYKKEKINPLGGCLPILVQIPVFIALYWVLLESVEMRQAPWILWIQDLSVRDPYFI 482 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 PI+M ++M Q K++P P D Q ++ +P VF + Sbjct: 483 L-------------------PILMGVTMIAQYKLNPAPMDPIQQKLMMALPFVFTVFFAF 523 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N++SI QQ I + Sbjct: 524 FPAGLVLYWFVNNLLSIAQQWYITR 548 >gi|117927031|ref|YP_867648.1| protein translocase subunit yidC [Magnetococcus sp. MC-1] gi|166975874|sp|A0LE49|OXAA_MAGSM RecName: Full=Inner membrane protein oxaA gi|117610787|gb|ABK46242.1| protein translocase subunit yidC [Magnetococcus sp. MC-1] Length = 556 Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 182/591 (30%), Positives = 292/591 (49%), Gaps = 61/591 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ AI LS +++ A+Q + + YP E + ++ ++ + A + Sbjct: 1 MD--RRTLTAIVLSFVLLTAFQFYMAWKYPPAELTGEQVQSGESSAPAPLASTAPVADAL 58 Query: 59 DDRAQALSMSP----------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + ++ S + KN + GS++L+G + ++ H DV Sbjct: 59 PPPVEGMAGSAPQQAMSQPLINTDAKSLLHFKNDLVEGSLSLQGGRLVGMDFLQ-HTDVL 117 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 PI + +++ E ++ + I+ P++NT W LI + L KLV+ Sbjct: 118 GGKPIS--FMGISQVESFYQESGFLPVAGSAIKAPDANTQWQLIGKESLQGAGEFKLVWD 175 Query: 162 NANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QE 218 N I+FE+ S YLFK+ D + NNS + + R + + + + Sbjct: 176 NGEGIVFEKLFSFAQGSYLFKVEDRLINNSAAALGVYHYSQFKRIPVINSQSMLAMSDFQ 235 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI----PSKETSFHSQ 274 G +A L + Y D+ + W G SDKY+ + + P + Sbjct: 236 GPMAYLNGERYQ-HSYEDLTAQDLRE-KGHGGWTGFSDKYFLAAMVAKPLPPEAQPRRYY 293 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 F Y Y+ N + I G+S+ LF G KE T+ + E I Sbjct: 294 FDY---DRPNYRVGMVENSVIIPAGQSLAVDYDLFIGPKEISTLER-----SNLSLERSI 345 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GWF+F+A+P+ ++++F ++V N+G+AI+L T+ +KLLFFPLA K Y S MK +QP Sbjct: 346 DYGWFHFLAEPLVKVLNFFNSVVHNYGVAIILLTLAIKLLFFPLANKSYRSMNAMKKLQP 405 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 KI+EL++ + + +AM++LY+TH +NPL GC PIL+QIPVFFA+YKV+ +S+EMR Sbjct: 406 KIEELKKLHGSDRNK-MNEAMMKLYQTHKVNPLGGCLPILVQIPVFFALYKVLFLSVEMR 464 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 HAPF WI DL+A DP + P++M SMF+Q K++P P+D Sbjct: 465 HAPFMLWIPDLSAMDPFYVL-------------------PLLMGGSMFLQSKLNPTPSDP 505 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 QA I+ ++PV+F SFP+GL++YW +NV+SI QQ IMK E Sbjct: 506 MQAKIMMFLPVIFTVMFLSFPSGLVLYWLVNNVLSISQQYYIMKKMEHEPS 556 >gi|71281074|ref|YP_271688.1| inner membrane protein, 60 kDa [Colwellia psychrerythraea 34H] gi|71146814|gb|AAZ27287.1| inner membrane protein, 60 kDa [Colwellia psychrerythraea 34H] Length = 543 Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 140/568 (24%), Positives = 267/568 (47%), Gaps = 50/568 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME + + IAL V+ + + ++ N ++ Q V+N+ A + + Sbjct: 1 MESQRSL-LFIALMVVTYLLFSQW------QQQNAVVPEQTSISQNQSVENADADFVPES 53 Query: 61 RAQALSM-------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 +S + + + +LI IN +G + LR + + ++ P L Sbjct: 54 SDAQVSSIKSTNTSAKLITVTTDTLILKINSQGGDIVEAKLRKFDTEQGNDIPFTIL--- 110 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLI--SGKILTPTTPIKLVFKNANNILFERT 171 N Y A+ ++ S +++ + LVF + + + + Sbjct: 111 QNGNQKYIAQSGLTGANGIDRTIKGRPIYTSAKNSYELVNDNLIVDLVFHDVSGMSVTKR 170 Query: 172 ISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAVLGDKSL 229 + +++ Y + + NN+ + + G++ + +T G ++ Sbjct: 171 FTFNKNSYSVNVDYLIDNNTANSVSVQMYGQLKQSTVVETGGGMLPTYRGAAYSTTEERY 230 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + + DIE++++ N + W+ + + Y+ S ++P+ + S Y ++ A F Sbjct: 231 EKYDFDDIEEANL-NAVTAGGWIAMLEHYFVSAWVPNAKDSNQLYTTYSNNFEAV--IGF 287 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 A + I GK +T+ +AG K+ + P ++ ID+G+ + I++P+F L Sbjct: 288 KAPAVIIDAGKQGSTSAIFYAGPKDQEVLEKI-----APNLDLTIDYGFLWMISQPLFWL 342 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + V N+G+AI++ T+ VK +PL K QY S A M+++ PK+ +L+E+F Q Sbjct: 343 LLTIQSFVTNWGVAIIIITLIVKGGMYPLTKAQYTSMAKMRDLAPKMAQLKERFGDD-RQ 401 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +A +++Y+ +NP GC P++LQ+P+F A+Y V S+E+RHAPF WI+DL+A D Sbjct: 402 KMSQATMEMYRKEKVNPAGGCLPLILQMPIFLALYWVFLESVELRHAPFVFWIQDLSAMD 461 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P + P++M +SM++ KM P D Q I+ +MPVVF Sbjct: 462 PFFVL-------------------PVLMGISMYVMQKMQPMTIQDPMQQKIMQYMPVVFS 502 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ FP+GL++YW SN+ISI Q +I Sbjct: 503 IFMAWFPSGLVLYWLVSNLISITQMKII 530 >gi|83649689|ref|YP_438124.1| putative inner membrane protein translocase component YidC [Hahella chejuensis KCTC 2396] gi|123529916|sp|Q2S6M5|OXAA_HAHCH RecName: Full=Inner membrane protein oxaA gi|83637732|gb|ABC33699.1| Preprotein translocase subunit YidC [Hahella chejuensis KCTC 2396] Length = 570 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 140/569 (24%), Positives = 247/569 (43%), Gaps = 64/569 (11%) Query: 21 WQNFYVYPRIEEMNNERKNIQTVKQPNQV---------------DNSYAAVLIDDRAQAL 65 W + I + + + A + + Sbjct: 23 WNEDMSPQQQPVAQTPSVTIDSNGADSSALLNSPNTGELDTPETASKPATAEDSNISSTA 82 Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD 125 S + + L I+L G + +L Y + + + +P+ + N Y A Sbjct: 83 SSGKIITVITDVLRVEIDLNGGNVVEASLLQYPISLKNPTPLDLM--QKNNGVYYVAASS 140 Query: 126 YVS--------TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DE 176 + N ++L G+ + L + + + Sbjct: 141 LIGANGFDDSKNGGNPIYIAEKNSYSLQEGQ---DKLSVDLR-TERDGVTIVKRYEFEKS 196 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGFIAVLGDKSLVEQ 232 Y + + N S + + +++R K T + G G + +K + Sbjct: 197 SYSINVNFQINNQSDAPWKANFSAKLVRDKSPDPTFSGGFGAASFLGAVVSTPEKPYEKI 256 Query: 233 KYSDIEKSSIS--NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 +SD+E+S S + SN W+ Y+ S +IP + Q + + Y F Sbjct: 257 DFSDMEESGPSGVKVNSSNGWIAFIQHYFVSAWIPLSNDTHTYQTRLR---NGLYLMGFV 313 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 E T+ PG++ L+AG K T+ P ++ +D+GW + IAKP+++++ Sbjct: 314 DPEFTVEPGQTHNVGAKLYAGPKIMETLKEV-----APNLDLTVDFGWLWLIAKPLYLVL 368 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + ++ VGN+GIAI+L TV +K LFF L+ Y S ANM+ + P++ +RE++ Q Sbjct: 369 EFIHDYVGNWGIAIILLTVLIKALFFHLSATSYRSMANMRRVTPEMQRIREQYGDD-RQR 427 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + +AM++LYK INPL GC P+L+Q+PVF ++Y V+ S+++R APF+ WI+DL+ DP Sbjct: 428 MSQAMMELYKKEKINPLGGCLPMLVQMPVFISLYWVLLESVQLRQAPFFFWIQDLSIKDP 487 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 + P++M +MF+Q ++P P D QA ++ MP++F Sbjct: 488 YFVL-------------------PLLMGAAMFLQTSLNPTPPDPIQARVMKMMPIIFTVF 528 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 FPAGL++YW +N++SI QQ I K Sbjct: 529 FLWFPAGLVLYWLVNNILSIAQQWYITKK 557 >gi|212211697|ref|YP_002302633.1| 60 kDa inner membrane protein [Coxiella burnetii CbuG_Q212] gi|254772771|sp|B6J2B4|OXAA_COXB2 RecName: Full=Inner membrane protein oxaA gi|212010107|gb|ACJ17488.1| 60 kDa inner membrane protein [Coxiella burnetii CbuG_Q212] Length = 566 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 138/571 (24%), Positives = 249/571 (43%), Gaps = 48/571 (8%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA-- 64 VA+ L++ + AWQ Y E+ ++ + +A Sbjct: 10 VIVAL-LAIALFNAWQRDYPPTPKPTPTVEQPTANGDHPTAYTPPAFTPGAAEKTKKAGT 68 Query: 65 ------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 +S + + ++ L I+ +G L Y + + V +LS Sbjct: 69 IALTSKVSEARLITVRTDVLDVEIDTQGGNIVSAKLPKYPVSLEEKQTPVQILSGE-PNE 127 Query: 119 AYFAELDYV---STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 Y A+ ++ + + L +G+ ++L + + +L +T + Sbjct: 128 LYVAQSGLTNGNGQPTTVQFESEKKQYVLENGQ---NQLIVQLTGRAPDGLLVTKTYTFH 184 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD--KSLVEQ 232 + Y + V NN+ + S +I R +P T + F V+ A +G + Sbjct: 185 RDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHFYVRSYNGASMGSPQTPYEKL 244 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHARYQAKF 289 Y ++K +I + W+ + Y+ S ++P + + ++ SD Y F Sbjct: 245 SYESLDKQNIDR-TSQSGWIAMQQHYFLSAWVPGNPELTYHYYSHVIPASDEPNVYVVGF 303 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + ++ + G T L+ G + + P E ID+GW + I+ +F + Sbjct: 304 VSPQMNVAAGSEAATHATLYVGPEIAKRLKGL-----APGLERTIDYGWLWPISMLLFWI 358 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S + + N+G +I++TT+ +K++F+ + K + S A M+ +QP+I L+E+ Q Sbjct: 359 LSAVHAVFKNWGWSIIITTILIKIVFYWFSAKSFRSMARMREMQPRIQALKERHGDD-RQ 417 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L +A ++LY+ INPL GC P+L+Q+PVF A Y VI S+++R APF WI DL+ D Sbjct: 418 ALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIESVQLRQAPFIFWIHDLSVKD 477 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I PIIM LSM Q +SP D Q ++ +PV+F Sbjct: 478 PYYIL-------------------PIIMGLSMLAQQWLSPTSPDPTQQKMMWILPVIFTV 518 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +FPAGL++YW +NV+ +QQ + K + Sbjct: 519 FFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549 >gi|145590263|ref|YP_001156860.1| 60 kDa inner membrane insertion protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189036355|sp|A4T0N2|OXAA_POLSQ RecName: Full=Membrane protein oxaA gi|145048669|gb|ABP35296.1| protein translocase subunit yidC [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 557 Score = 419 bits (1076), Expect = e-114, Method: Composition-based stats. Identities = 156/588 (26%), Positives = 263/588 (44%), Gaps = 55/588 (9%) Query: 1 MERNWNYFVAIA-LSVIIVYA-WQNFYVYPRIE--EMNNERKNIQTVKQPNQVDNSYAAV 56 M+ A+ LS +++Y WQ P + P ++D A Sbjct: 1 MDFKKTILWAVFSLSGLMLYNNWQVHEGKPSMFGGAPATTASAPNKSGAPAKLDTPVAIS 60 Query: 57 LIDDRAQALSM-------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 I Q + + + L+N L I+ GA D L +++++ V Sbjct: 61 GIPSVTQTPTANSAPVESTQKFVLENELLSVEISAAGANVVDAKLLK---ELTADQKPVE 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 + + Y A V+ N +LPN +++ L P ++ N + E Sbjct: 118 IF-QHTPTHTYVARSGLVAVGNT-DLPNHTSLFKLDRSGKDGSGRPFLVLSSERNGVKLE 175 Query: 170 RTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT-------ATNTFGVQEGFI 221 +T L+ Y + VT + + I+R + + G Sbjct: 176 KTFLLNPGSYDIYVGHRVTQVTPNGAPLILYTEIVRDGSEEKKIGPFGGAFSASTFTGPA 235 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFH----ESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 + ++DIEK+ + W+ + Y+AS +IP + Sbjct: 236 IYTDGGKYKKVSFADIEKNKFTAPSQIAAGQPGWVAMVQHYFASAWIPDDKLPRDIYSGK 295 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + + Y+ TI G ++ LF G +E + P E+L D+G Sbjct: 296 IDN--DLYRVGMQTQLGTIATGTTVMANAQLFVGPQEERMLETI-----APGLELLKDYG 348 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +AKP+F L+ + +N+VGN+G +I+L TV +KL FFPL+ Y S A MK +QP++ Sbjct: 349 YLTILAKPIFWLLEHIHNIVGNWGWSIILLTVLIKLAFFPLSAASYKSMARMKEVQPRLA 408 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ++E++K PQ L +AM+++Y+ INPL GC P+++QIPVF ++Y V+ S+EMR AP Sbjct: 409 AMKEQYKG-EPQKLNQAMMEMYRKEKINPLGGCLPVVIQIPVFISLYWVLLSSVEMRGAP 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DL+ DP I P++M++SMF+Q K++P P D QA Sbjct: 468 WILWIHDLSVPDPYYIL-------------------PVVMAVSMFVQTKLNPTPPDPVQA 508 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 ++ +MP+VF FPAGL++YW +N++SI QQ I ++ G + Sbjct: 509 KVMMYMPIVFSIMFFFFPAGLVLYWVTNNLLSIAQQWQINRLFGKKPA 556 >gi|52843195|ref|YP_096994.1| inner membrane protein, 60 kDa [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81680366|sp|Q5ZR81|OXAA_LEGPH RecName: Full=Inner membrane protein oxaA gi|52630306|gb|AAU29047.1| inner membrane protein, 60 kDa [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 556 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 140/574 (24%), Positives = 261/574 (45%), Gaps = 47/574 (8%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK-----QPNQVDNSYAAVLID 59 + +AL++I + W + + ++ E+ Q N+ V + Sbjct: 4 RRIVLYMALALIGLSLWNAWQIDYPAKQPVEEKTASQLTSDGHLLPQIIPSNAEQPVTLK 63 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV-SSNSPIVTLLSPSNTK- 117 +A S +++K L I+LK L Y L V N P L + ++ + Sbjct: 64 AEEKASSGKQLIQVKTDVLDVDIDLKNGDIVKGLLLDYPLSVEDKNKPFPLLQNQASQRY 123 Query: 118 ---NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 ++ F + + + + + L + + L K+ + + ++ Sbjct: 124 VANSSLFVLDGQTPQSLDFDFTSEKEYYELKPDQ---NQLIVTLNGKSEDGLDVKKEFVF 180 Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGD---KSL 229 YL ++ + N + +++R P+ ++ F + A + Sbjct: 181 TKGSYLIEVNYKIANTGNSLWKGYFNTQLLRSSPKEDKSSIFHIGSYTGASFSNPGKNRY 240 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + +SD+ KS++ + W+ + Y+ S ++P+ ++ Y Sbjct: 241 QKVSFSDMSKSNL-DVDAKGGWIAMQQHYFLSAWVPNADSENKFYTLATD---KDYTIGA 296 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + IT+ P + + L+ G + + P ++ +D+G +F++ +F L Sbjct: 297 VSQPITVKPKEDKIVGSKLYIGPEITSVLKGIS-----PSLDLTVDYGILWFLSSLLFSL 351 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M Y +VGN+G +I+L TV +KL F+ L+ Y S A+M+ +QPK+ LRE++ + Sbjct: 352 MKAIYTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAK 411 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + Q A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WI DLA+AD Sbjct: 412 ISQ-ATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASAD 470 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P ++ P+IM +M IQ K++P PAD QA ++ ++P++F Sbjct: 471 PYHVL-------------------PLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTG 511 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +FP+GL++YW +N +SI+QQ I + + E Sbjct: 512 LFWNFPSGLVLYWIVNNTLSILQQWYITRKYSDE 545 >gi|294789683|ref|ZP_06754916.1| inner membrane protein OxaA [Simonsiella muelleri ATCC 29453] gi|294482395|gb|EFG30089.1| inner membrane protein OxaA [Simonsiella muelleri ATCC 29453] Length = 555 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 133/570 (23%), Positives = 242/570 (42%), Gaps = 61/570 (10%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 A+ LS+ I+ WQ+F+ P+ + + + + A Sbjct: 4 KRMLWAMILSLAIMMTWQHFFPTPQPNQ------------------PTKSPIATTHPIAA 45 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 LS + + ++ ++ I+ K L L Y V L ++ Y A+ Sbjct: 46 LSETSPITVQTDTVQAVIDEKSGDLRGLTLLKYDATEDKTKNFV--LFDDKPQHTYIAQS 103 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIV 183 + N L N S + + L N + + + + YL + Sbjct: 104 QLIDANGNNLLKNVTFTAAQKSYMLNGDKVEVHLTAPMQNGLQISKIYTFTQGSYLVNVR 163 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGD-KSLVEQKYSDIEKS- 240 V N S + + F G + D + +SD++ Sbjct: 164 FDVQNQGAATKLGSNYAIVRDNHTPEGQGFFMHSYTGPVVYTPDADEFQKVTFSDLDDDF 223 Query: 241 ------SISNFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHARYQAK 288 + + + G+ Y+A+ ++ + + Y Sbjct: 224 KTGKDTAEYQRKATGGYAGMIQHYFAATWLAQTHDTGSNICETGCNINIKKQSDTLYSVV 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + + G + + + L+AG + ++ P+ ++L D+G + A P+F Sbjct: 284 LNTPMKDVAAGSTQSFSANLYAGPQTTSILNKV-----APKLDLLKDYGRVHIFAAPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L++ +N +GN+G AI+ T+ VK + FPL +K Y S A M+ + PK++ L++++ Sbjct: 339 LLNKLHNFIGNWGWAIIFLTLIVKAVLFPLNQKAYKSMAKMRTVAPKMEALKKQYAND-Q 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +Q+AMI+LYK INPL GC P+L+Q+P+F +Y +I +S+E+R AP+ GWI DL+ A Sbjct: 398 MGMQQAMIKLYKDEQINPLGGCLPMLIQMPIFIGLYWMIFLSVELRQAPWLGWITDLSRA 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I PI+M+ +M+ Q K+SPPP+D QA ++ MP++F Sbjct: 458 DPFYIL-------------------PILMAATMWFQTKLSPPPSDPMQAQMMKIMPLMFS 498 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++Y+ +N+++I QQ I + Sbjct: 499 IMFFFFPAGLVLYYVVNNLLTIAQQWYINR 528 >gi|145628056|ref|ZP_01783857.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 22.1-21] gi|144979831|gb|EDJ89490.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 22.1-21] Length = 514 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 136/544 (25%), Positives = 246/544 (45%), Gaps = 55/544 (10%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + V I +S ++ WQ P +QT + + S Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPP-----------VQTEQTTSITATSDVPASS 49 Query: 59 DDRAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +QA++ S + L+N I+ G L Y ++ S +P L Sbjct: 50 PSNSQAIADSQTRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KD 107 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFER 170 ++ Y A+ + N I+ + + + + + L+F+ + + +++ Sbjct: 108 TKEHIYIAQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFE-KDGVTYQK 165 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKS 228 L Y + + N S I P G++ +++ N G D + Sbjct: 166 IFVLKRGSYDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSDTN 225 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + ++D++ +++S W+ + Y+ S +IP+++ + + + Sbjct: 226 YKKYSFADMQDNNLS-IDTKAGWVAVLQHYFVSAWIPNQDVNNQ-LYTITDSKNNVASIG 283 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + +TI G T T+ L+ G K + +L ++ +D+GW +FIAKP+F Sbjct: 284 YRGPVVTIPSGSQETITSSLWTGPKLQNQMATVANNL-----DLTVDYGWAWFIAKPLFW 338 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ +V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Sbjct: 339 LLTFIQGIVSNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGDD-R 397 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A Sbjct: 398 QRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQ 457 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ KMSP P D Q ++N+ + F Sbjct: 458 DPYYIL-------------------PILMGISMFLLQKMSPTPVTDPTQQKVMNFYAISF 498 Query: 528 VFAL 531 + + Sbjct: 499 LCSF 502 >gi|54299007|ref|YP_125376.1| hypothetical protein lpp3074 [Legionella pneumophila str. Paris] gi|81679354|sp|Q5X0M2|OXAA_LEGPA RecName: Full=Inner membrane protein oxaA gi|53752792|emb|CAH14227.1| hypothetical protein lpp3074 [Legionella pneumophila str. Paris] Length = 556 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 140/574 (24%), Positives = 262/574 (45%), Gaps = 47/574 (8%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK-----QPNQVDNSYAAVLID 59 + +AL++I + W + + ++ E+ Q N+ + + Sbjct: 4 RRIVLYMALALIGLSLWNAWQIDYPAKQPVEEKTASQLTSDGHLLPQIIPSNAEQPITLK 63 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV-SSNSPIVTLLSPSNTK- 117 +A S +++K L I+LK L Y L V N P L + ++ + Sbjct: 64 AEEKASSSKQLIQVKTDVLDVDIDLKNGDIVKGLLLDYPLSVEDKNKPFPLLQNQASQRY 123 Query: 118 ---NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 ++ F + + + + + L S + + L K+ + + ++ Sbjct: 124 VANSSLFILDGQTPQSLDFDFTSEKEYYELKSDQ---NQLIVTLNGKSEDGLDVKKEFVF 180 Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGD---KSL 229 YL ++ + N + +++R P+ ++ F + A + Sbjct: 181 TKGSYLIEVNYKIANTGNSLWKGYFNTQLLRSSPKEDKSSIFHIGSYTGASFSNPGKNRY 240 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + +SD+ KS++ + W+ + Y+ S ++P+ ++ Y Sbjct: 241 QKVSFSDMSKSNL-DVDAKGGWIAMQQHYFLSAWVPNADSENKFYTLATD---KDYTIGA 296 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + IT+ P + + L+ G + + P ++ +D+G +F++ +F L Sbjct: 297 VSQPITVKPKEDKIVGSKLYIGPEITSVLKGIS-----PSLDLTVDYGILWFLSSLLFSL 351 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M Y +VGN+G +I+L TV +KL F+ L+ Y S A+M+ +QPK+ LRE++ + Sbjct: 352 MKAIYTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAK 411 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + Q A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WI DLA+AD Sbjct: 412 ISQ-ATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASAD 470 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P ++ P+IM +M IQ K++P PAD QA ++ ++P++F Sbjct: 471 PYHVL-------------------PLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTG 511 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +FP+GL++YW +N +SI+QQ I + + E Sbjct: 512 LFWNFPSGLVLYWIVNNTLSILQQWYITRKYSDE 545 >gi|148361343|ref|YP_001252550.1| preprotein translocase subunit YidC [Legionella pneumophila str. Corby] gi|296108684|ref|YP_003620385.1| preprotein translocase YidC subunit [Legionella pneumophila 2300/99 Alcoy] gi|166975873|sp|A5IIK4|OXAA_LEGPC RecName: Full=Inner membrane protein oxaA gi|148283116|gb|ABQ57204.1| Preprotein translocase subunit YidC [Legionella pneumophila str. Corby] gi|295650586|gb|ADG26433.1| preprotein translocase YidC subunit [Legionella pneumophila 2300/99 Alcoy] Length = 556 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 143/568 (25%), Positives = 257/568 (45%), Gaps = 46/568 (8%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ--VDNSYAAVLIDDRAQAL 65 I LS+ AWQ Y + E + Q N+ V + +A Sbjct: 12 LALIGLSL--WNAWQIDYPAAQPVEDKTASQLTSDGHLLPQIIPSNAEQPVTLKAEEKAS 69 Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV-SSNSPIVTLLSPSNTK----NAY 120 S +++K L I+LK L Y L V N P L + ++ + ++ Sbjct: 70 SGKQLIQVKTDVLDVGIDLKNGDIVKGLLLDYPLSVEDKNKPFPLLQNQASQRYVANSSL 129 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 F + + + + + L + + L K+ + + ++ YL Sbjct: 130 FVLDGQTPQSLDFDFTSEKEYYELKPDQ---NQLIVTLNGKSEDGLDVKKEFVFTKGSYL 186 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGD---KSLVEQKYS 235 ++ + N + +++R P+ ++ F + A + + +S Sbjct: 187 IEVNYKIANTGNSLWKGYFNTQLLRSSPKEDKSSIFHIGSYTGASFSNPGKNRYQKVSFS 246 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D+ KS++ + W+ + Y+ S ++P+ ++ Y + IT Sbjct: 247 DMSKSNL-DVDAKGGWIAMQQHYFLSAWVPNADSENKFYTLATD---KDYTIGAVSQPIT 302 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + P + + L+ G + + P ++ +D+G +F++ +F LM Y Sbjct: 303 VKPKEDKIVGSKLYIGPEITSVLKGIS-----PSLDLTVDYGILWFLSSLLFSLMKAIYT 357 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +VGN+G +I+L TV +KL F+ L+ Y S A+M+ +QPK+ LRE++ ++ Q A Sbjct: 358 VVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAKISQ-AT 416 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WI DLA+ADP ++ Sbjct: 417 MELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASADPYHVL- 475 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 P+IM +M IQ K++P PAD QA ++ ++P++F +FP Sbjct: 476 ------------------PLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTGLFWNFP 517 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +GL++YW +N +SI+QQ I + + E Sbjct: 518 SGLVLYWIVNNTLSILQQWYITRKYSDE 545 >gi|126668973|ref|ZP_01739912.1| putative inner membrane protein translocase component YidC [Marinobacter sp. ELB17] gi|126626557|gb|EAZ97215.1| putative inner membrane protein translocase component YidC [Marinobacter sp. ELB17] Length = 593 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 144/594 (24%), Positives = 251/594 (42%), Gaps = 60/594 (10%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ A +S ++V AW Y P +E + + + A Sbjct: 26 MDIKRIVLFAGLAVVSYLMVLAWNEDYHQPVPVAQTSEPVDFSAAGNNDTMTLPEAGDAN 85 Query: 59 DDRAQALSMSPR-----------------VELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 D + V + +I+ +L Y ++ Sbjct: 86 TDSTGEFATPESETSLSNTNNVNNVSNQYVHVITDVFDITIDQVSGNLVSSSLLQYDREL 145 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTAN-----NIELPNSNTVWNLISGKILTPTTPI 156 + + P+ L + N Y E + N + P ++ N + Sbjct: 146 NGDEPLKLLSNTQN--RLYVLESGLIGRDGPDNSRNGDAPVYSSTQNSYQMAEGENQLAV 203 Query: 157 KLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNT 213 L + + + + + + + Y I + N S ++ + + G+I+R QT+ N+ Sbjct: 204 DLNYTTNSGVNIIKRFTFNRDDYQIDIRYLIDNRSENEWQANFTGKIVRDQAGDQTSQNS 263 Query: 214 FGV--QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 G+ G + + + + D++ I N +N W+ Y+ + ++P + Sbjct: 264 MGIKAFLGLVVSTPEDPYEKYDFDDLKDKPI-NQSVTNGWMAFLQHYFLTAWVPEPDQQA 322 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 Q F + G+++ + G K + P + Sbjct: 323 QFQTTRRGP---LAVMGFVYPATNVPVGETVEVGASAYVGPKIIDRLETV-----APNLD 374 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW +FI+ P+F+++++F+ ++GN+G++I+L TV VK LFF L+ Y S A M+ Sbjct: 375 RTVDFGWLFFISLPLFVVLNWFHGIIGNWGVSIILLTVLVKGLFFHLSATSYRSMARMRA 434 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + PK+ ++E + Q + M+ LYK INPL GC PIL+Q+PVF ++Y V+ S+ Sbjct: 435 VAPKLARMKELYGDD-RQRMSTEMMALYKREKINPLGGCLPILVQMPVFISLYWVLFESV 493 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 ++RHAPF WI DL+ DP I PIIM SM +QM ++P P Sbjct: 494 QLRHAPFALWIHDLSVMDPYFIL-------------------PIIMGASMMLQMHLNPTP 534 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 D QA I+ MPVVF FPAGL++YW +NV+SI QQ I + A++ Sbjct: 535 PDPMQAKIMKLMPVVFTIFFLWFPAGLVLYWVVNNVLSISQQWYITRKIEAQMA 588 >gi|221135461|ref|ZP_03561764.1| 60 kDa inner membrane insertion protein [Glaciecola sp. HTCC2999] Length = 571 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 151/590 (25%), Positives = 269/590 (45%), Gaps = 63/590 (10%) Query: 1 MERNWNY-FVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNI-----------------Q 41 ME ++ +A+AL S ++ WQ Y + + + Q Sbjct: 1 MESQRSFMLIALALVSFLLWQEWQTAYGPKAVTPVEQTEQKASLTEAKFVASNVPSDLAQ 60 Query: 42 TVKQPNQVDNSYAAVLIDDRAQ--------ALSMSPR-VELKNPSLIGSINLKGAQFDDL 92 T N V N+ A V + + L S R VE+ +L +I+L G Sbjct: 61 TGTNTNSVQNTAADVPANMANEPTVPVVRNQLGQSERFVEVTTDTLQVTIDLLGGDVVKA 120 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWN--LISGKIL 150 NL Y + SN +LL P N Y A+ + P+ ++ ++ + Sbjct: 121 NLIKYPITEGSNDAY-SLLRP-NAAALYVAQSGLIGANGPDANPDGRPLYTSPIMQYTLN 178 Query: 151 TPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209 + + L + +N + +T ++ ++ T+TN S D I P ++ + Sbjct: 179 NDSLSVPLSWVGSNGMRITKTFVFTRGNHAVELQQTITNGSNDTIIVQPYAQLKQTFTLP 238 Query: 210 ATNTFG-VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 N F G + + + DIE S+ W+ + + Y+ S ++P ++ Sbjct: 239 EGNMFMPTYRGAAYGTEQEQYQKYSFGDIEDESL-RIATPAGWIAMIEHYFLSAWVPPQD 297 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + + + G +++ ++I+ G + L+ G K+ T+ Y K L Sbjct: 298 KTNTIYTRAI--GTEYATIGYTSEPVSIVSGAETRLDSLLYLGPKDQDTLKQYAKGLN-- 353 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + +D+G+ +FI++ +F L+ +V N+G+AI++ T+ VK + +PL KKQY S A Sbjct: 354 ---LTVDYGFLWFISEWLFWLLQMIQGVVVNWGVAIIIITIIVKGIMYPLTKKQYESMAK 410 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ + PK+ +L+E+F Q + +AM++LYK +NP+ GC+P+LLQ+P+F A+Y V Sbjct: 411 MRVLGPKMTQLKERFGDD-RQKMSQAMMELYKKEKVNPMGGCFPLLLQMPIFLALYWVFL 469 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S+E+RHA F WI DL+ DP + PI+ +SM+ K+ Sbjct: 470 ESVELRHADFVFWITDLSTKDPYFVL-------------------PILTGISMWALQKLQ 510 Query: 509 PPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P D+ Q I+ +MP++ FP+GL++YW SNVI++VQ +I Sbjct: 511 PMTVTDEMQKKIMQFMPIMMTIFFMWFPSGLVLYWLISNVITLVQAKLIY 560 >gi|29655205|ref|NP_820897.1| inner membrane protein oxaA [Coxiella burnetii RSA 493] gi|161830140|ref|YP_001597736.1| inner membrane protein oxaA [Coxiella burnetii RSA 331] gi|30581048|sp|P45650|OXAA_COXBU RecName: Full=Inner membrane protein oxaA gi|189036348|sp|A9NBA5|OXAA_COXBR RecName: Full=Inner membrane protein oxaA gi|29542477|gb|AAO91411.1| 60 kDa inner membrane protein [Coxiella burnetii RSA 493] gi|161762007|gb|ABX77649.1| Inner membrane protein oxaA [Coxiella burnetii RSA 331] Length = 566 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 138/571 (24%), Positives = 249/571 (43%), Gaps = 48/571 (8%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA-- 64 VA+ L++ + AWQ Y E+ ++ + +A Sbjct: 10 VIVAL-LAIALFNAWQRDYPPTPKPTPTVEQPTANGDHPTAYTPPAFTPGAAEKTKKAGT 68 Query: 65 ------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + ++ L I+ +G L Y + + V +LS Sbjct: 69 IAFTSKVPEARLITVRTDVLDVEIDTQGGNIVSAKLPKYPVSLEEKQTPVQILSGE-PNE 127 Query: 119 AYFAELDYV---STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 Y A+ ++ + + L +G+ ++L + + +L +T + Sbjct: 128 LYIAQSGLTNGNGQPTTVQFESEKKQYVLENGQ---NQLIVQLTGRAPDGLLVTKTYTFH 184 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD--KSLVEQ 232 + Y + V NN+ + S +I R +P T + F V+ A +G + Sbjct: 185 RDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHFYVRSYNGASMGSPQTPYEKL 244 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHARYQAKF 289 Y ++K +I + W+ + Y+ S ++P + + ++ SD Y F Sbjct: 245 SYESLDKQNIDR-TSQSGWIAMQQHYFLSAWVPGNPELTYHYYSHVIPASDEPNVYVVGF 303 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + ++ + G T L+ G + + P E ID+GW + I+ +F + Sbjct: 304 VSPQMNVAAGSEAATHATLYVGPEIAKRLKGL-----APGLERTIDYGWLWPISMLLFWI 358 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S + +V N+G +I++TT+ +K++F+ + K + S A M+ +QP+I L+E+ Q Sbjct: 359 LSAVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARMREMQPRIQALKERHGDD-RQ 417 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L +A ++LY+ INPL GC P+L+Q+PVF A Y VI S+++R APF WI DL+ D Sbjct: 418 ALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIESVQLRQAPFIFWIHDLSVKD 477 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I PIIM LSM Q +SP D Q ++ +PV+F Sbjct: 478 PYYIL-------------------PIIMGLSMLAQQWVSPTSPDPTQQKMMWILPVIFTV 518 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +FPAGL++YW +NV+ +QQ + K + Sbjct: 519 FFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549 >gi|153209754|ref|ZP_01947492.1| Inner membrane protein oxaA [Coxiella burnetii 'MSU Goat Q177'] gi|212217713|ref|YP_002304500.1| 60 kDa inner membrane protein [Coxiella burnetii CbuK_Q154] gi|254772770|sp|B6J8U7|OXAA_COXB1 RecName: Full=Inner membrane protein oxaA gi|120575257|gb|EAX31881.1| Inner membrane protein oxaA [Coxiella burnetii 'MSU Goat Q177'] gi|212011975|gb|ACJ19355.1| 60 kDa inner membrane protein [Coxiella burnetii CbuK_Q154] Length = 566 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 137/571 (23%), Positives = 249/571 (43%), Gaps = 48/571 (8%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA-- 64 VA+ L++ + AWQ Y E+ ++ + +A Sbjct: 10 VIVAL-LAIALFNAWQRDYPPTPKPTPTVEQPTANGDHPTAYTPPAFTPGAAEKTKKAGT 68 Query: 65 ------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + ++ L I+ +G L Y + + V +LS Sbjct: 69 IALTSKVPEARLITVRTDVLDVEIDTQGGNIVSAKLPKYPVSLEEKQTPVQILSGE-PNE 127 Query: 119 AYFAELDYV---STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 Y A+ ++ ++ + L +G+ ++L + + +L +T + Sbjct: 128 LYVAQSGLTNGNGQPTTVQFESAKKQYVLENGQ---NQLIVQLTGRAPDGLLVTKTYTFH 184 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD--KSLVEQ 232 + Y + V NN+ + S +I R +P T + F V+ A +G + Sbjct: 185 RDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHFYVRSYNGASMGSPQTPYEKL 244 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHARYQAKF 289 Y ++K +I + W+ + Y+ S ++P + + ++ S Y F Sbjct: 245 SYESLDKQNIDR-TSQSGWIAMQQHYFLSAWVPGNPELTYHYYSHVIPASGEPNVYVVGF 303 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + ++ + G T L+ G + + P E ID+GW + I+ +F + Sbjct: 304 VSPQMNVAAGSEAATHATLYVGPEIAKRLKGL-----APGLERTIDYGWLWPISMLLFWI 358 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S + +V N+G +I++TT+ +K++F+ + K + S A M+ +QP+I L+E+ Q Sbjct: 359 LSAVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARMREMQPRIQALKERHGDD-RQ 417 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L +A ++LY+ INPL GC P+L+Q+PVF A Y VI S+++R APF WI DL+ D Sbjct: 418 ALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIESVQLRQAPFIFWIHDLSVKD 477 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I PIIM LSM Q +SP D Q ++ +PV+F Sbjct: 478 PYYIL-------------------PIIMGLSMLAQQWLSPTSPDPTQQKMMWILPVIFTV 518 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +FPAGL++YW +NV+ +QQ + K + Sbjct: 519 FFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549 >gi|256823857|ref|YP_003147820.1| 60 kDa inner membrane insertion protein [Kangiella koreensis DSM 16069] gi|256797396|gb|ACV28052.1| 60 kDa inner membrane insertion protein [Kangiella koreensis DSM 16069] Length = 536 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 140/579 (24%), Positives = 249/579 (43%), Gaps = 65/579 (11%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME +F+ + ++ AWQ Y ++ NE+ + ++ Sbjct: 1 MESMRGFFILGFAICTFLLYQAWQKDYGPQSQQQEVNEQFGQKDAVVDSE---------- 50 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + S +E+ I+ G L Y+ ++ S V L + Sbjct: 51 ------IKSSNLIEVVTDVFKVKIDRVGGDVVYAELNDYNRELDSEKEKVVLFDYRD--R 102 Query: 119 AYFAELDYVSTAN------NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ + + L GK I L + N + + F +T Sbjct: 103 LYQAKSALLGNGAPDNQLPRATYQVKQNAYQLADGK---NELEIPLTWVNEDGVEFTKTF 159 Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA---TNTFGVQEGFIAVLG--D 226 + Y + V N S + ++ ++R + T ++FG+ + Sbjct: 160 KFKRDDYEIGVEYKVKNQSSNDRTYNFVAELIRDQKPTGLEEKSSFGMSPFIGVAYSPEE 219 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + + D+ + I N W+G Y+ S +IP ++ S+ Sbjct: 220 RKYEKMSVEDLVEEPI-NVTRQGGWIGYLQHYFISAWIPEQQEQIKVTTTVKSNQDTV-- 276 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 +F +++ L+ G K + A P E +D W ++I P+ Sbjct: 277 IRFIQPTVSVPAQSESVINATLYVGPKILKRLEA-----AAPGLEKSLDLSWVWWIGLPL 331 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 + LM +F++ VGN+G+AI+L T+ VK L +PL+ QY S ANM+ + PK+ +L+E++ + Sbjct: 332 YKLMQFFFSFVGNWGLAIILVTLVVKALLYPLSAAQYRSMANMRKLAPKMQQLKERYGED 391 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q +Q+ M+++YK NP GC P++LQ P+F A+Y V+ ++E+RHAPF WI+DL+ Sbjct: 392 K-QRMQQEMMKMYKDEGANPFGGCLPMILQFPIFIALYYVLFEAVELRHAPFVAWIQDLS 450 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMP 524 ADP + P++M SM++ K+ P P D Q I++++P Sbjct: 451 VADPYFVL-------------------PLLMGGSMWLMQKLQPQSPTMDPMQQKIMSYLP 491 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +VF + FPAGL++YW +N+IS+ QQ I K + Sbjct: 492 IVFTVFMLFFPAGLVLYWLCNNLISVAQQQYITKKIEKQ 530 >gi|154706390|ref|YP_001423626.1| 60 kDa inner membrane protein [Coxiella burnetii Dugway 5J108-111] gi|189036347|sp|A9KBT1|OXAA_COXBN RecName: Full=Inner membrane protein oxaA gi|154355676|gb|ABS77138.1| 60 kDa inner membrane protein [Coxiella burnetii Dugway 5J108-111] Length = 566 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 137/571 (23%), Positives = 249/571 (43%), Gaps = 48/571 (8%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA-- 64 VA+ L++ + AWQ Y E+ ++ + +A Sbjct: 10 VIVAL-LAIALFNAWQRDYPPTPKPTPTVEQPTANGDHPTAYTPPAFTPGAAEKTKKAGT 68 Query: 65 ------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + ++ L I+ +G L Y + + V +LS Sbjct: 69 IALTSKVPEARLITVRTDVLDVEIDTQGGNIVSAKLPKYPVSLEEKQTPVQILSGE-PNE 127 Query: 119 AYFAELDYV---STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 Y A+ ++ ++ + L +G+ ++L + + +L +T + Sbjct: 128 LYVAQSGLTNGNGQPTTVQFESAKKQYVLENGQ---NQLIVQLTGRAPDGLLVTKTYTFH 184 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD--KSLVEQ 232 + Y + V NN+ + S +I R +P T + F V+ A +G + Sbjct: 185 RDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHFYVRSYNGASMGSPQTPYEKL 244 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHARYQAKF 289 Y ++K +I + W+ + Y+ S ++P + + ++ S Y F Sbjct: 245 SYESLDKQNIDR-TSQSGWIAMQQHYFLSAWVPGNPELTYHYYSHVIPASGEPNVYVVGF 303 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + ++ + G T L+ G + + P E ID+GW + I+ +F + Sbjct: 304 VSPQMNVAAGSEAATHATLYVGPEIAKRLKGL-----APGLERTIDYGWLWPISMLLFWI 358 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S + +V N+G +I++TT+ +K++F+ + K + S A M+ +QP+I L+E+ Q Sbjct: 359 LSSVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARMREMQPRIQALKERHGDD-RQ 417 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L +A ++LY+ INPL GC P+L+Q+PVF A Y VI S+++R APF WI DL+ D Sbjct: 418 ALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIESVQLRQAPFIFWIHDLSVKD 477 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I PIIM LSM Q +SP D Q ++ +PV+F Sbjct: 478 PYYIL-------------------PIIMGLSMLAQQWLSPTSPDPTQQKMMWILPVIFTV 518 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +FPAGL++YW +NV+ +QQ + K + Sbjct: 519 FFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549 >gi|307611885|emb|CBX01601.1| hypothetical protein LPW_32881 [Legionella pneumophila 130b] Length = 556 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 140/574 (24%), Positives = 261/574 (45%), Gaps = 47/574 (8%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK-----QPNQVDNSYAAVLID 59 + +AL++I + W + + ++ E+ Q N+ V + Sbjct: 4 RRIVLYMALALIGLSLWNAWQIDYPAKQPVEEKTASQLTSDGHLLPQIIPSNAEQPVTLK 63 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV-SSNSPIVTLLSPSNTK- 117 +A S +++K L I+LK L Y L V N P L + ++ + Sbjct: 64 AEEKASSGKQLIQVKTDVLDVDIDLKNGDIVKGLLLDYPLSVEDKNKPFPLLQNQASQRY 123 Query: 118 ---NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 ++ F + + + + + L + + L K+ + + ++ Sbjct: 124 VANSSLFVLDGQTPQSLDFDFTSEKEYYELKPDQ---NQLIVTLNGKSEDGLDVKKEFVF 180 Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGD---KSL 229 YL ++ + N + +++R P+ ++ F + A + Sbjct: 181 TKGSYLIEVNYKIANIGNSLWKGYFNTQLLRSSPKEDKSSIFHIGSYTGASFSNPGKTRY 240 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + +SD+ KS++ + W+ + Y+ S ++P+ ++ Y Sbjct: 241 QKVSFSDMSKSNL-DVDAKGGWIAMQQHYFLSAWVPNADSENKFYTLATD---KDYTIGA 296 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + IT+ P + + L+ G + + P ++ +D+G +F++ +F L Sbjct: 297 VSQPITVKPKEDKIVGSKLYIGPEITSVLKGIS-----PSLDLTVDYGILWFLSSLLFSL 351 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M Y +VGN+G +I+L TV +KL F+ L+ Y S A+M+ +QPK+ LRE++ + Sbjct: 352 MKAIYTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAK 411 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + Q A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WI DLA+AD Sbjct: 412 ISQ-ATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASAD 470 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P ++ P+IM +M IQ K++P PAD QA ++ ++P++F Sbjct: 471 PYHVL-------------------PLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTG 511 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +FP+GL++YW +N +SI+QQ I + + E Sbjct: 512 LFWNFPSGLVLYWIVNNTLSILQQWYITRKYSDE 545 >gi|325983266|ref|YP_004295668.1| membrane protein insertase, YidC/Oxa1 family domain containing [Nitrosomonas sp. AL212] gi|325532785|gb|ADZ27506.1| membrane protein insertase, YidC/Oxa1 family domain containing [Nitrosomonas sp. AL212] Length = 642 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 149/607 (24%), Positives = 263/607 (43%), Gaps = 62/607 (10%) Query: 3 RNWNYFVAIALSVIIVYAWQNFY--VYPRIEEMNNERKNIQTVKQ---PNQVDNSY---- 53 + I S +++ W + +YP ++ + ++ Q P V Sbjct: 2 ETKKLLLIIIFSTSLLFLWDAWQKELYPPSSQVMPGATSTESSNQRHDPLPVPGDELAAS 61 Query: 54 ----------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 V + ++++K +I I+ G L L + Sbjct: 62 AAESSAVLGIEGVSPSVTPNLFPIGEKIQVKTDMVIAEIDTAGGDIRQLGLIEHPSREDI 121 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP------IK 157 N P LL T A+ + LPN T + + K P ++ Sbjct: 122 NKPYELLLDK--TARFQVAQSGLIGDG----LPNHKTKYTVEDNKYSYQLEPGQEKVVVR 175 Query: 158 LVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTF 214 LV A+ I + + Y+ + + N+S I +++R +P A Sbjct: 176 LVAPEADGIQVTKIYTFHRGSYVIDVEFEIANHSEAAIIPFSYFQMLRDPNEPVGAGALV 235 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHS 273 G D+ ++ K+SD++K+ + N W+ + + Y+ + ++P + Sbjct: 236 HSYTGAAMYTDDEKFLKIKFSDLDKNKAEYPTNADNGWIAMLEHYFLTAWLPEPGSPREY 295 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 K L+ Y A A T+ P + + +AG +E + P E+ Sbjct: 296 FAKRLAPNQ--YTAGVIAPVGTVEPDRVKNISMPFYAGPQEQNKLAEL-----APGLELT 348 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+GW +AKP+F L+S++++ N+GIAI+L T+ VKL+FFPL+ Y S A ++ + Sbjct: 349 VDYGWLTVLAKPLFWLLSFYHSWTDNWGIAIILLTLTVKLIFFPLSAAGYRSMAKLRVVT 408 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ +RE++ Q + +AM++ YK INP+ GC PIL+QIPVF A++ + ++E+ Sbjct: 409 PKLQRIREQYASD-RQRMHQAMMEFYKEEKINPMGGCLPILVQIPVFIALFWTLLAAVEL 467 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R+AP WI D++ DP + P+IM +SM++Q K+SP PAD Sbjct: 468 RYAPLALWITDMSVPDPYYVL-------------------PVIMGVSMWVQSKLSPTPAD 508 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 QA ++ MP+ F FP+GL++Y +N++SI QQ I +M+ + Sbjct: 509 PIQAKVMQIMPIAFSIFFFFFPSGLVLYSLCNNILSIAQQWQITRMYENKAEEEANKDRN 568 Query: 574 FSKNYNS 580 K N Sbjct: 569 KKKTKNG 575 >gi|238021627|ref|ZP_04602053.1| hypothetical protein GCWU000324_01529 [Kingella oralis ATCC 51147] gi|237866241|gb|EEP67283.1| hypothetical protein GCWU000324_01529 [Kingella oralis ATCC 51147] Length = 568 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 139/583 (23%), Positives = 257/583 (44%), Gaps = 64/583 (10%) Query: 1 MERN-----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 M++ A++++ + AWQ+F+ + Q Sbjct: 1 MQQQNPSDFKRMLTTAAVAIVFMMAWQHFFPA---------------AQPQQQQAAQQQQ 45 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 +A L + V ++ ++ +I+ K L L+ Y + L Sbjct: 46 TAAQPQAAPLGATVPVSVETDTVKATIDEKSGDLRGLTLQHYDATHDTAQSFT--LFADG 103 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL- 174 Y A+ + V N L N+N S + ++L N + ++ + Sbjct: 104 KPLTYVAQSNLVDANGNNILANANFQAASKSQTLNGDKLEVRLTAPAQNGVQVDKIYTFT 163 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKS---- 228 YL + V N S ++ +I+R + A + G + D Sbjct: 164 KGSYLVNVRFEVKNTSSQAVKLGTSYQIVRDNSKPAGEGWFTSSYVGPVLYTPDADAFQK 223 Query: 229 ----LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSDGH 282 +++ + + ++ S ++G+ Y+AS +I P + + Sbjct: 224 VQFATLDKDFEAGKDTAEYQRKASGGYVGMIQHYFASAWIMQPENGENLCTGGSCTIGIK 283 Query: 283 ----ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 Y A + + I G S T L+AG + + P+FE+ D+G Sbjct: 284 RLPSNLYSAGVNTAAVDIPAGGSKTFAANLYAGPQVTSILKTI-----APKFELTKDYGR 338 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + A P+F L+++ + ++GN+G AI++ T+ VK + FPL +K Y S A M++IQPK++ Sbjct: 339 VHIFASPLFALLNWLHGIIGNWGWAIIVLTLIVKAILFPLNQKAYKSMAKMRSIQPKMEA 398 Query: 399 LREKFKQ-SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L++K+ +Q+ +++LY+ INPL GC P+L+Q+P+F +Y +I +S+E+R AP Sbjct: 399 LKKKYPNPEDRMAMQQELMKLYRDEKINPLGGCLPMLIQMPIFIGLYWMIFLSVELRQAP 458 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + GWI DL+ DP I PI+M+++M++Q KMSPPP+D QA Sbjct: 459 WLGWIHDLSRPDPFYIL-------------------PILMAVTMYLQTKMSPPPSDPTQA 499 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ MP++F FPA L++Y+ +N+++I QQ +I + Sbjct: 500 QMMKIMPLMFSVMFFFFPAALVLYYVVNNLLTIAQQWLINRQT 542 >gi|54295839|ref|YP_128254.1| hypothetical protein lpl2930 [Legionella pneumophila str. Lens] gi|81679103|sp|Q5WSE9|OXAA_LEGPL RecName: Full=Inner membrane protein oxaA gi|53755671|emb|CAH17174.1| hypothetical protein lpl2930 [Legionella pneumophila str. Lens] Length = 556 Score = 415 bits (1066), Expect = e-113, Method: Composition-based stats. Identities = 140/574 (24%), Positives = 261/574 (45%), Gaps = 47/574 (8%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK-----QPNQVDNSYAAVLID 59 + +AL++I + W + + ++ E+ Q N+ V + Sbjct: 4 RRIVLYMALALIGLSLWNAWQIDYPAKQPVEEKTASQLTSDGHLLPQIIPSNAEQPVTLK 63 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV-SSNSPIVTLLSPSNTK- 117 +A S +++K L I+LK L Y L V N P L + ++ + Sbjct: 64 AEEKASSGKQLIQVKTDILDVDIDLKNGDIVKGLLLDYPLSVEDKNKPFPLLQNQASQRY 123 Query: 118 ---NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 ++ F + + + + + L + + L K+ + + ++ Sbjct: 124 VANSSLFVLDGQTPQSLDFDFTSEKEYYELKPDQ---NQLIVTLNGKSEDGLDVKKEFVF 180 Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGD---KSL 229 YL ++ + N + +++R P+ ++ F + A + Sbjct: 181 TKGSYLIEVNYKIANIGNSLWKGYFNTQLLRSSPKEDKSSIFHIGSYTGASFSNPGKNRY 240 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + +SD+ KS++ + W+ + Y+ S ++P+ ++ Y Sbjct: 241 QKVSFSDMSKSNL-DVDAKGGWIAMQQHYFLSAWVPNADSENKFYTLATD---KDYTIGA 296 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + IT+ P + + L+ G + + P ++ +D+G +F++ +F L Sbjct: 297 VSQPITVKPKEDKIVGSKLYIGPEITSVLKGIS-----PSLDLTVDYGILWFLSSLLFSL 351 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M Y +VGN+G +I+L TV +KL F+ L+ Y S A+M+ +QPK+ LRE++ + Sbjct: 352 MKAIYTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAK 411 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + Q A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WI DLA+AD Sbjct: 412 ISQ-ATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASAD 470 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P ++ P+IM +M IQ K++P PAD QA ++ ++P++F Sbjct: 471 PYHVL-------------------PLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTG 511 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +FP+GL++YW +N +SI+QQ I + + E Sbjct: 512 LFWNFPSGLVLYWIVNNTLSILQQWYITRKYSDE 545 >gi|94263631|ref|ZP_01287440.1| 60 kDa inner membrane insertion protein [delta proteobacterium MLMS-1] gi|93455936|gb|EAT06091.1| 60 kDa inner membrane insertion protein [delta proteobacterium MLMS-1] Length = 559 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 159/579 (27%), Positives = 285/579 (49%), Gaps = 41/579 (7%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN-----------IQTVKQPNQVDN 51 N+ +AI LS+ I+ +Q F++ P E E + +P D Sbjct: 2 NNYRALLAIVLSMAILLVYQFFFMPPPPESTAPEPEAPVAERATAPTAAPERPRPGTTDP 61 Query: 52 SYAAVLIDDRA--QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + A +D + + ++ I+ G L+ + V +SP Sbjct: 62 TGAPAPVDVSSLLAQEVEGREIVVETDLYEAVISEAGGALRSFRLKEFRETVDPDSPAKE 121 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP---TTPIKLVFKNANNI 166 L+ ++ N + + +L + + G+++ P + L ++ + Sbjct: 122 LVR-TDHDNGLPLRFSWGVEPHQADLLHYQSERQ---GRLVVPAGREQTLTLRAQSPLGL 177 Query: 167 LFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF--GVQEGFIAV 223 F RT + D +L ++ + V N ++ +P + + + + +G +A+ Sbjct: 178 EFIRTYTFRDSDHLLELREEVRNTGEVPLQGAPYLALTSRPFEAEDDPLKRFLFDGPVAL 237 Query: 224 LGDKSLVEQKYSDI-EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + D + E + D+ E+ S +F SW G D Y+ + IP ++ + F ++ Sbjct: 238 V-DGEVHEVRPRDLVEERSGRSFTGEVSWAGYHDSYFLAAIIPREQGQATAHFS--ANRE 294 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 ++ + PG++ + ++ G K+ ++ DL +++GWF F+ Sbjct: 295 ETATTVLASAAEVLNPGEARSYEYMVYYGPKKLAELNAIGYDLG-----RSVNFGWFDFL 349 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A+P F ++S+F+ +VGN+G+AI++ T+ +K+LF+PL K S M+ IQP++ +LREK Sbjct: 350 ARPAFYVLSFFHGMVGNYGLAIIMVTILIKILFWPLTHKGLKSMKVMQKIQPRMAKLREK 409 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 FK Q Q+ M++LY+T+ +NPL GC P+LLQIPVFFA+YKV+ S+E+RHAPF WI Sbjct: 410 FKDDK-QRQQQEMLKLYQTYKVNPLGGCLPMLLQIPVFFALYKVLLQSVELRHAPFMLWI 468 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+A D I F +P + + ++M+ SMFIQ KM+P AD QA I+ + Sbjct: 469 NDLSAPDRLYI-------GFDIPWLGGIPVLTLLMAASMFIQQKMTPI-ADPMQARIMLF 520 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +P+VF F +F +GL++YW +NV++I QQ I + Sbjct: 521 LPLVFFFLFLNFASGLVLYWFINNVLTIAQQYTIYRQKD 559 >gi|269468577|gb|EEZ80226.1| Preprotein translocase subunit YidC [uncultured SUP05 cluster bacterium] Length = 546 Score = 408 bits (1049), Expect = e-111, Method: Composition-based stats. Identities = 143/581 (24%), Positives = 251/581 (43%), Gaps = 60/581 (10%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNN-----------ERKNIQTVKQPNQ 48 M+ + VAI LS I W + + ++ N +QT Q Sbjct: 1 MDNQKFFLIVAIFLS--IFLLWDKWEITHTVDTNGNLVRQTKTIEFDTPTPVQTQSQTPT 58 Query: 49 VDNSYAAVLIDDR------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 D ++ A A+ P + L I+ KG + L Y ++ Sbjct: 59 QDQDVPSITHTKARVDLPIAPAIQQHPHTTVSTDLLTVEISHKGGTVQNALLNAYPEELD 118 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVF 160 L + + + A+ + ++P ++++ + ++ T + + Sbjct: 119 GIKKFQLLSNKAGG--LFQAQSGLLPQE---QMPTHHSIFTSSNNNYQLNGETLTVPFKW 173 Query: 161 KNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 K+ N I + Y+ + VTNNS ++ S +++R+ + G Sbjct: 174 KSDNGIEVVKNFHFKRGSYVITVDYVVTNNSNKELTLSSYTQLVRNALDESNMMMPTFTG 233 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + ++ D W + Y+ + +IP + ++ S Sbjct: 234 GAKFDDQDVYEKIEFDDFSSEP--KTTSKGGWTAMIQHYFFAAWIPDSD---NTHSYSSS 288 Query: 280 DGHARYQAKFSANEITILPGKSITTT-NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + Y ++I PG + + L+ G KE I P + +D+G Sbjct: 289 ARNNNYLLTVVNPNVSIAPGATTVLPGSDLYIGPKEQARIDSV-----APGLDKTVDYGV 343 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + IAKP+ LM + Y++V ++G +I++ T+ +KL F+ L++K Y S A M+ + P++ + Sbjct: 344 LFIIAKPLSELMHWIYSIVNSWGWSIIILTILIKLAFYKLSEKSYRSMAGMRKLSPRLTK 403 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+E + Q L + ++LYK INP +GC PIL+QIPVF ++Y V+ +E+R PF Sbjct: 404 LKETYGDDK-QKLGQKTMELYKKEKINPASGCLPILVQIPVFISLYWVLLEMVELRQTPF 462 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 W ++ DL+A DP I PIIM +SMF+Q K++PPP D QA Sbjct: 463 W-YLADLSAQDPYYIL-------------------PIIMGVSMFVQQKLNPPPPDPMQAK 502 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 I+ +P VF FP+GL++YW +N++SI QQ VI K Sbjct: 503 IMMSLPFVFTIFFLWFPSGLVLYWVVNNILSITQQWVINKR 543 >gi|320354720|ref|YP_004196059.1| protein translocase subunit YidC [Desulfobulbus propionicus DSM 2032] gi|320123222|gb|ADW18768.1| protein translocase subunit yidC [Desulfobulbus propionicus DSM 2032] Length = 549 Score = 408 bits (1049), Expect = e-111, Method: Composition-based stats. Identities = 159/563 (28%), Positives = 272/563 (48%), Gaps = 28/563 (4%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ------VDNSYAAVLIDDR 61 F+AI LS +I+ +Q F+V P + + Q NQ + Sbjct: 7 FLAIVLSFLILIGYQYFFVKPVPPQPQAPGQATQAASSANQQTAGGAPAAATGIAATPST 66 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 ++ V + P IN +G L+ Y + ++ + L+ +A Sbjct: 67 VAVDPLAHDVTVDTPLYTAVINEQGGGVKGFVLKSYRSTNAEDAGPMQLIIGKGPADAPV 126 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLF 180 + LP N ++ T + + A+ I RT++ + YL Sbjct: 127 LFS--LDNGAGTVLPTYTADKNAVTLTNQGDTGTLTMTAALADGIAIVRTLTFRGDSYLI 184 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEK 239 + V+N + ++ SP ++ A+ T + G A + +K LVE K + + Sbjct: 185 NVEYKVSNTTDRPVQVSPALTMVNEPFAHASETSKYLFAGPAAYVNEK-LVETKAKKLTE 243 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + + SW G D Y+ + P+ + + L + + S TI P Sbjct: 244 APVV-LQGKVSWTGYVDNYFMTTVAPAVG---NGRTITLQGSEQQVRTVLSEGIQTIGPH 299 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + + L+ G K+ + DLA +D+GWF +AKPM L+++F+ N Sbjct: 300 EGKSFAYTLYFGPKKLQVLQTAGSDLA-----KAVDFGWFDVLAKPMLWLLNFFHQFSHN 354 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G+AI+L T+ +KL+F+P+ +K S NM+ +QPKI +LRE+FK P + + + M+ LY Sbjct: 355 YGVAIILLTILIKLIFWPITQKGMKSMKNMQKLQPKIAKLRERFKDDPAK-MNQEMMTLY 413 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 KT+ +NP+ GC P+L+QIP FFA+Y+V+ ++E+RHAPF WI DL+A D I Sbjct: 414 KTYKVNPVGGCLPMLIQIPFFFALYRVLMAAIELRHAPFMLWINDLSAPDRLWI------ 467 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 F +P + I ++M SM++Q KM+P AD QA I+ ++P+VF F +F +GL+ Sbjct: 468 -GFDIPYLHGIPILTLLMGASMYLQQKMTPTTADPTQARIMQFLPIVFTFMFINFASGLV 526 Query: 540 IYWSWSNVISIVQQAVIMKMHGA 562 +YW +N++SI+QQ +I + + A Sbjct: 527 LYWFVNNLLSILQQYLINRQNKA 549 >gi|224367782|ref|YP_002601945.1| OxaA [Desulfobacterium autotrophicum HRM2] gi|223690498|gb|ACN13781.1| OxaA [Desulfobacterium autotrophicum HRM2] Length = 557 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 166/578 (28%), Positives = 275/578 (47%), Gaps = 40/578 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV--YPRIEEMNNE----------RKNIQTVKQPNQ 48 M+ F AI LS++++ W F+V P E+ + + +I + P Sbjct: 1 MDDQKRLFTAIILSIVVIVGWNFFFVDSKPVPEKPDQAIVSNEQPMAGKGDIAPITDPAP 60 Query: 49 VDNSYAAVLIDDRAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + + + R +++ N +I+ GA+ + L L Y +SP+ Sbjct: 61 SQQTEIDAAQPPATAIPTRNARTIQVSNQFYNIAISETGAKVNSLTLNAYRETSEKDSPL 120 Query: 108 VTLLSPSNTKNAYFAELDYVSTANN----IELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 ++SP+ T + LD S + NL GK + + +A Sbjct: 121 KEMVSPNLTGGLFGVSLDGKSIPGLETALFTAQTPSDQLNLDQGK-----KSLTFTWTSA 175 Query: 164 NNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 ++ E+ + + YL + N+S ++ S I N EG Sbjct: 176 QGVVVEKIFTFSADSYLIGFDLVLKNSSGMPMKDSFMVEIP--GIIDEKNARFSFEGPTT 233 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 ++ DK L E K I + + W G +D+Y+ S IP T + + S Sbjct: 234 LINDK-LEEIKAKKIAEK--DTYEGQIQWAGYTDRYFMSCLIPQAPTEAKVKLSFDSP-- 288 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 ++ + + PGK +T + LF G K + Y +L I++GWF + Sbjct: 289 -VVTTRYVQSMERLDPGKQVTYSFSLFMGPKSLKLLSSYGNNLK-----KAINFGWFDIL 342 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP M M+ + L+ N+GIAIML T+ +KL+F+PL K Y S +MK +QP + E+REK Sbjct: 343 AKPCLMGMNLIHGLIPNYGIAIMLLTLLIKLIFWPLGTKSYRSMNDMKKLQPLMMEMREK 402 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +K Q + + ++ LYKT+ +NP++GC P+++Q+P+FFA+Y+++ ++E+RHAPF WI Sbjct: 403 YKGDK-QRMNQEVMGLYKTYKVNPMSGCLPMIVQMPIFFALYRMLYQAIELRHAPFMWWI 461 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+A D +F +PF + + + IIM +MF+Q KMSP D QA ++ Sbjct: 462 NDLSAPD--RLFHFDFAIPF-MQAPYGIPVLTIIMGATMFLQQKMSPSTGDPTQAKMMML 518 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 MP+ F +FPAGL++YW +NV+SI QQ I K Sbjct: 519 MPLFMTFIFINFPAGLVLYWLVNNVLSIGQQYYIQKKF 556 >gi|308273509|emb|CBX30111.1| hypothetical protein N47_D29200 [uncultured Desulfobacterium sp.] Length = 551 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 166/567 (29%), Positives = 279/567 (49%), Gaps = 24/567 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA---VL 57 ME+ + +A+ALS I+ W FY + + E +NI + P N Sbjct: 1 MEQAR-FIIAVALSFIVFLGWDYFYNDKKPAKQITEVQNIDKRQSPVDNKNINPPEKSSQ 59 Query: 58 IDDRAQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 DD + RV E+ P IN K A L+ Y+ + +SP L+ Sbjct: 60 SDDTVFQENKPLRVFEINTPLYSVKINEKNAAITSFKLKKYNETIDVDSPKKELIPKDLN 119 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT-PIKLVFKNANNILFERTISLD 175 D + + IE N + +L + IK +K+ ++ E+ Sbjct: 120 TGTVIVGFD-EKSVHGIENATYTADSNAAANLVLDQGSKEIKFYWKSPEGVIIEKKYKFS 178 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVEQK 233 + YL + V N S I+ I + +TN+F EG A++ SL + K Sbjct: 179 ADTYLIGLKLNVLNQSSQSIKDRLFVSIESYNMSNKSTNSF---EGPSALIN-GSLEQIK 234 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 +IE+ + ++ + W+ I D+Y+ S IP + + + ++ +++ E Sbjct: 235 LKNIEEKN--SYPGNIKWVAIQDRYFMSAIIPVTPVEANMRLYMKAKDKGYFEEQYTLPE 292 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 I PG+ L+ G K + DL +++GWF F+AKP+ M++ Sbjct: 293 KEIRPGEQEEKEFKLYFGPKSLKLLGSLGYDLN-----KAVNFGWFDFLAKPVLYAMNFL 347 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y+ + N+G+ I+L T+F K++F+PL K Y S MK IQP + EL+EK+ + + + Sbjct: 348 YSFIPNYGVVIILLTIFFKIIFWPLGSKSYKSMNEMKKIQPLLAELKEKYGNDK-KRMNE 406 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 ++ LYKT+ INP+ GC P++ Q+PVFFA Y+++ ++E+RHAPF WIKDL+A D + Sbjct: 407 ELMGLYKTYKINPMGGCLPMVAQLPVFFAFYRMLYETIELRHAPFVFWIKDLSAPD--RL 464 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 F +PF P + + + I+M +MFIQ KM+P D QA ++ ++P+VF + Sbjct: 465 FHFAFTIPFMEPPY-GIPVLTIVMGATMFIQQKMAPAVGDPAQAKMMMFLPLVFTVIFIN 523 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMH 560 F AGL++YW +NV+SI+QQ +I + + Sbjct: 524 FSAGLVLYWLVNNVLSILQQNIISRKN 550 >gi|160872739|ref|ZP_02062871.1| inner membrane protein OxaA [Rickettsiella grylli] gi|159121538|gb|EDP46876.1| inner membrane protein OxaA [Rickettsiella grylli] Length = 538 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 261/572 (45%), Gaps = 46/572 (8%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD-NSYAAVLIDDRAQA 64 F+ AL ++ W + N+ T + N+++ + + +++R Sbjct: 5 RVFLLGALFLVAFMLWNAWQNEYPSHHQEIGSANVITEQPDNKINLPAMKTIPVENR--- 61 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL--DVSSNSPIVTLLSPSNTKNAYFA 122 + + + +K L I+ G NL Y + ++P L + + + Y A Sbjct: 62 -NKNRFIHVKTDVLDVWIDTVGGNIVKANLLHYPQYPNQPRSTPFQLLNNDN--AHYYVA 118 Query: 123 ELDYVST--ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YL 179 + +ST ++ + L + + + LV I ++ + + YL Sbjct: 119 QNGLISTEKKQVFHYQSNKNNYTLNPEESV---LKVSLVCNTCGKIKVQKQFTFKRNDYL 175 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237 + ++N + + + K A + F + G +K + + + Sbjct: 176 IPVRYQISNVAPSIFEGRFYVQFQQRKIDKAHSLFNISSYTGGAISTQNKPYQKISFDKM 235 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 ++ ++S + W+ + Y+ S +IP FH D Y I Sbjct: 236 KQGTLS-LATQDGWVAMLQHYFLSAWIPPAGQEFHFYSYAKDD---IYTLGMLGAPFQIQ 291 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PG + + L+ G + + P ++ +D+G +FI+ +F L+ + ++ V Sbjct: 292 PGMEFVSESKLYLGPESMDRLKAV-----APHLDLTVDYGILWFISMALFSLLKFIHHYV 346 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G +I++ TV +KL F+ L+ K Y S A+M+++QP++ LRE++ Q L +A + Sbjct: 347 GNWGWSIVIVTVLIKLAFYHLSAKSYRSMASMRSLQPRLQALRERYGDDK-QKLTQATMA 405 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYKT +NPL GC PIL+QIPVF A+Y ++ S+E+R APF WI DL+A DP I Sbjct: 406 LYKTEKVNPLGGCLPILVQIPVFIALYWMLLESVELRQAPFILWIHDLSAKDPYYIL--- 462 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 P++M ++MF+Q +++PPP D QA ++ ++P+ F +FP+G Sbjct: 463 ----------------PVLMGITMFVQQRLNPPPPDPTQAKVMQFLPIFFTALFLNFPSG 506 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 L++YW +N +SI+QQ IM+ E+ + Sbjct: 507 LVLYWIVNNTLSILQQWFIMRRLSVELSKKKQ 538 >gi|328675234|gb|AEB27909.1| OxaI/YidC membrane insertion protein [Francisella cf. novicida 3523] Length = 551 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 150/575 (26%), Positives = 264/575 (45%), Gaps = 56/575 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ + ++ +E +N + N+ + A Sbjct: 10 LLVTIAIMFISLMGKWEQTFPADNTKQQTSETQNNSHYDNADATTNTNITAADAKSSLAK 69 Query: 66 SM-------SPRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + ++L +L+ Y + + +P+ L S ++ Sbjct: 70 ETNFSKYDNAKSITINTGVFKDLKVSLLDGAIISASLKDYTISLDDKTPMSLLTDKSGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE- 176 Y A+ V I + + +GK + + L N + + RT + D+ Sbjct: 130 --YIAKSTIVVNKQPISINFESQGIKTENGKQI-----LTLTA-NTDGLQIIRTYTFDDT 181 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF------GVQEGFIAVLGDKSLV 230 Y + ++ N + + R + G S Sbjct: 182 KYNITVSQSIKNTTSAPVNLIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFR 241 Query: 231 EQKYSDIEKSSISNF---HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 ++ + DI K++ + W+ Y+ S +IP S +++ Y + ++A Sbjct: 242 KESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIP---QSTNAKIYYKNLNGDVFEA 298 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +TI P +S ++ L+ G I DLA P E +D+G F ++ +F Sbjct: 299 GAFTG-VTIAPNQSENISSILYTGP----IIKANLVDLA-PNLEKTLDYGMLSFFSEIIF 352 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 353 WVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKDD- 411 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 412 RQALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSM 471 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP + P++M LSMF+Q K+SP PAD QA ++ ++PV+F Sbjct: 472 KDPYFVL-------------------PVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIF 512 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 513 TFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|167717468|ref|ZP_02400704.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei DM98] Length = 454 Score = 405 bits (1041), Expect = e-110, Method: Composition-based stats. Identities = 140/469 (29%), Positives = 221/469 (47%), Gaps = 41/469 (8%) Query: 102 SSNSPI--VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIK 157 P VTL + + Y A + + PN N V+ ++G +K Sbjct: 9 DGKQPDLSVTLFDHT-ANHTYLARTGLLGG----DFPNHNDVYAQVAGPTSLAADQNTLK 63 Query: 158 LVFKNA--NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 L F++ + +T + Y+ + + N + S ++R T F Sbjct: 64 LSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMF 123 Query: 215 -GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFH 272 G K + + DI+K+ + N W+ + Y+AS +IP Sbjct: 124 SHTFLGPAVYTDQKHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGAKRD 183 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + + Y+ I PG+S + LFAG +E + P E+ Sbjct: 184 IYVEKIDP--TLYRVGVKQPVAAIAPGQSADVSARLFAGPEEERMLEGI-----APGLEL 236 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + D+GW IAKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I Sbjct: 237 VKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEI 296 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 P++ LRE+FK P Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+E Sbjct: 297 TPRMQALRERFKSDP-QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVE 355 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MR AP+ WI DL+ DP I P++M++SMF+Q K++P P Sbjct: 356 MRGAPWVLWIHDLSQRDPYFIL-------------------PVLMAVSMFVQTKLNPTPP 396 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 D QA ++ +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 397 DPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 445 >gi|329118137|ref|ZP_08246849.1| YidC/Oxa1 family membrane protein insertase [Neisseria bacilliformis ATCC BAA-1200] gi|327465797|gb|EGF12070.1| YidC/Oxa1 family membrane protein insertase [Neisseria bacilliformis ATCC BAA-1200] Length = 544 Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats. Identities = 133/570 (23%), Positives = 234/570 (41%), Gaps = 58/570 (10%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 + +S +I++ W + P+ + +++ Q N Sbjct: 4 KRTTLFFIVSALILFGWGWLFPAPQPVQNPAQQQAAQPAAAVQAALNPTVP--------- 54 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + + ++ I+ L L Y+ P L +N Y A+ Sbjct: 55 ------ITVATDTVSAVIDEASGDLRGLTLLKYNSADDEGKPFA--LFENNQNGVYIAQS 106 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIV 183 D + + + ++L A+ + +T + + YL + Sbjct: 107 DLIDETGRSLTQGLSFKSAKKQYALENGKAQVRLTATTASGLEIAKTYTFTQGSYLIDVR 166 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDIEKS- 240 V N S ++ + R++R A + + G + + + +SD++ Sbjct: 167 FDVANRSGKPLKAAAAYRVVRDSKTPAGQGYFMSSYTGPVLYTPEGKFQKVSFSDLDDDF 226 Query: 241 ------SISNFHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD----GHARYQAK 288 + + W+GIS Y+ S +I P S + D Y A Sbjct: 227 QKGRDQAEYERQTQSGWVGISQHYFFSAWILQPKDGASICAAAGCRIDIKRRDGGLYTAG 286 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 SA E + G S + L+AG + + E++ D+G ++ A +F Sbjct: 287 VSAAEPELPAGASQSYAAKLYAGPQTTAELGKIAD-----HLELVKDYGRVHWPATALFW 341 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 LM + L GN+G AI+L TV VK++ +PL Y S A M+ + PK++ L++++ Sbjct: 342 LMDKLHGLTGNWGWAIVLLTVIVKIILYPLNNASYKSMAKMRAVAPKLEALKKQYGDDRM 401 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + Q M YK INPL GC P+LLQIP+F +Y I S+E+R AP+ GWI DL+ Sbjct: 402 AMQQAMMQM-YKDEKINPLGGCLPMLLQIPIFIGLYWAIFSSVELRQAPWLGWITDLSRH 460 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P++M+ +M Q ++PPP+D QA ++ MP+VF Sbjct: 461 DPWFIL-------------------PVLMTATMMFQTTLNPPPSDPMQAKMMKIMPLVFS 501 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++Y+ +N+++I QQ + + Sbjct: 502 VMFFFFPAGLVLYYVVNNILTIAQQMHVNR 531 >gi|254468017|ref|ZP_05081423.1| inner membrane protein, 60 kDa [beta proteobacterium KB13] gi|207086827|gb|EDZ64110.1| inner membrane protein, 60 kDa [beta proteobacterium KB13] Length = 535 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 149/564 (26%), Positives = 262/564 (46%), Gaps = 43/564 (7%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + + S ++ W ++ ++ + + + Y + I++ A Sbjct: 2 ETKRLILFVVFSFSLLLLWDSW-----QQKQLQTELAVNNAELSDLQPGDYDSSNIENPA 56 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 L+ ++ +K IN G L L + + + +L+ Y A Sbjct: 57 YQLADDQKIVVKTSLYEAEINTVGGDIRKLKLANFQN--DNKDGLYEILNDEMNPLLYIA 114 Query: 123 ELDYVSTANNIELPNSNTVWN--LISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 + + LP V+ + + + ++F+N + +T +++Y Sbjct: 115 QSGLIG----KNLPTHKDVFKSDQLQYESNDQEVSVPIIFENEE-VKVVKTYIFSNDNYQ 169 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 K+V ++TN S ++ +++ HK + G + + DI+ Sbjct: 170 IKLVTSITNKSDAALQPQIYYQLLHDHKSAEKSGMMPTFTGVSYFTEASKFKKMDFDDID 229 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + ++ W+GI +Y+AS +I + K L+DG + A A + Sbjct: 230 NQKPFTQNANDGWIGIIQRYFASAWIIPGNSPRQFYTKRLTDGIS--SAGVRAKLAMVEA 287 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G S ++ L++G + + A P E +D+GW FIA P+F L+S LV Sbjct: 288 GSSAEVSSVLYSGPQLKKQLIK-----AAPGMEYTVDYGWLTFIASPLFSLLSGIQKLVH 342 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G++I+L T+ +K+ F+PL+ Y S A +K + P++ ++EKF Q +Q+AM++L Sbjct: 343 NWGVSIILLTLVIKIFFYPLSASSYRSMAQLKEVAPRLQSMKEKFGDDK-QKMQQAMMEL 401 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YKT INPL GC PIL+QIPVF A+Y V+ ++E+R APF+GWI DL+ DP I Sbjct: 402 YKTEKINPLGGCLPILIQIPVFIALYWVLLGAVELRQAPFFGWITDLSVKDPLYIL---- 457 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 PI+M+ SMF+Q K++P P D QA ++ MP++F FPAGL Sbjct: 458 ---------------PILMAASMFLQQKLNPKPTDPTQARLMMMMPIIFSIFFFFFPAGL 502 Query: 539 IIYWSWSNVISIVQQAVIMKMHGA 562 ++YW +NV+S++QQ + K A Sbjct: 503 VLYWFINNVLSMMQQWYVNKQIHA 526 >gi|51244707|ref|YP_064591.1| hypothetical protein DP0855 [Desulfotalea psychrophila LSv54] gi|50875744|emb|CAG35584.1| conserved hypothetical membrane protein [Desulfotalea psychrophila LSv54] Length = 553 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 160/566 (28%), Positives = 267/566 (47%), Gaps = 33/566 (5%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT------VKQPNQVDNSYAAV 56 +AI +S I++ +Q F+ P +++ QT KQ + A V Sbjct: 2 ETKRALLAIVISFAILFGYQYFF--PGLDQPVQTTSETQTTVNGTSAKQAGAIQEITAPV 59 Query: 57 LIDDRAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + + PR + + +I+ G L+ + +SP + L++ S Sbjct: 60 IPVVASAKYDRVPRDIVVDTDLYTATISEAGGALKSFVLKEQKETNAEDSPGMQLVNNSK 119 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 T + Y + A + L S + + K++ ++ ER + D Sbjct: 120 T-DGYPLTFSWGGAAPSNLLYTSQDSEVRFGSN---GKARLIMTAKSSTGLVIERVYTFD 175 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA--VLGDKSLVEQ 232 + YLF + V N S ++ S + + ++ + + F+ V D L E Sbjct: 176 KKTYLFDLDVRVVNQSGQALQGSAQLHQVSVPYESTEDNPAARFLFMGPVVYADGELTEI 235 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 D+E S F WLG +Y+ S+ +P Q S G ++ + Sbjct: 236 DPKDLEDGPQS-FMGDIQWLGYESRYFMSMIVP---YGLDGQTFTTSGGADLTKSFIAGG 291 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 T+ G + G K+ + DL + +++GWF IAKP L+++ Sbjct: 292 LDTLAAGAEKEYKYHVLYGPKKVEMLKSAGYDL-----DKAVNFGWFDIIAKPTLWLLNF 346 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F++ N+GIAI+L T+ K +F+P+ +K S NM+ +QPK+ L+EK K P + + Sbjct: 347 FHSFTHNYGIAIILVTIMFKGIFWPITQKGMKSMKNMQKLQPKMAALKEKHKDDPTR-MN 405 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 K ++ LYK + +NPL GC P++LQIPVFFA+YKV+ +S+E+RHAPF WI DL+A D Sbjct: 406 KEVMSLYKAYKVNPLGGCLPMVLQIPVFFALYKVLLLSIELRHAPFMFWITDLSAPDRLW 465 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I F LP + + ++M SMF+Q K SP AD QA I+ ++PVVF F Sbjct: 466 I-------GFNLPYLGGLPVLTLLMGASMFLQQKFSPTTADPTQAKIMMFLPVVFTFMFL 518 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558 +F +GL++YW +N++SI+QQ +I + Sbjct: 519 NFASGLVLYWFVNNLLSILQQVLINR 544 >gi|323700637|ref|ZP_08112549.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp. ND132] gi|323460569|gb|EGB16434.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio desulfuricans ND132] Length = 555 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 159/579 (27%), Positives = 250/579 (43%), Gaps = 42/579 (7%) Query: 1 ME--RNWNYFVAIALSVIIVYAWQNFYVYPRIEE-------MNNERKNIQTVKQPNQVDN 51 ME +A+ LS I+++ WQ P E+ + + Q Q Sbjct: 1 MEKKEQIRLVIALVLSFIVLFGWQYL-TGPSAEQKAEMARKAAEAEQKTAALTQKTQDAA 59 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + V + P +G + L+ Y + +SP V L+ Sbjct: 60 ELAKEAAPVADFVPTDGVSVTVDTPLYTAVFTSQGGVLEKFILKNYRETIQKDSPFVDLV 119 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT---PTTPIKLVFKNA-NNIL 167 P+ L + T N+ E SG LT L F + Sbjct: 120 GPNAFAKG---PLGLILTLNDKEYHTWKRGKWAFSGSDLTLAEGDGTKTLTFTGQVDGYR 176 Query: 168 FERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 ER ++ + YL TVTN + + + + + IA L Sbjct: 177 IERVLTFHPDTYLIDESATVTNLTGTGAEGALSFTAAAKSMSDEDDRYNPTK--IAYLTK 234 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + E D K W I Y+ IP E + S + D R Sbjct: 235 DTRKEMTDRDDLKKDGITAPADLKWGAIESNYFLFAVIPGGENA--SLSGGVQDDIFRMA 292 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 ++ T +P + T F G + ++ DLA +++GWF F+AKP+ Sbjct: 293 V---TDKATFMPNVAKTLKTSYFVGPTDRKMLNAMPNDLA-----DAVNFGWFDFLAKPL 344 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 + +++FY VGN+G+AI++ TV +KL+F+PL++K Y S MK +QP + +LREK+ Sbjct: 345 LVGLNFFYGFVGNYGVAIIILTVIIKLIFWPLSQKSYGSMEKMKKLQPMVAKLREKYGDD 404 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q L + + LYKT+ +NP+ GC P+++QIPVFF +YK + ++E+RHAP +I L Sbjct: 405 K-QRLNQETMALYKTYKVNPMGGCLPMVVQIPVFFGLYKALLGAVELRHAP---FIAHLP 460 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 D + L P+Y+ PIIM SMF+Q KM+P D Q I+ MP+V Sbjct: 461 FTDLPWLADLSAKDPYYIS--------PIIMGASMFLQQKMTPSAGDPTQQKIMLIMPLV 512 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 F F FP+GL+IYW ++N++SI QQ +I + + Sbjct: 513 FTFMFLQFPSGLVIYWLFNNLLSIGQQLMIARKSRVKTA 551 >gi|56707390|ref|YP_169286.1| inner-membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110669861|ref|YP_666418.1| inner-membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134302668|ref|YP_001122637.1| inner-membrane protein of unknown function [Francisella tularensis subsp. tularensis WY96-3418] gi|224456465|ref|ZP_03664938.1| hypothetical protein FtultM_01268 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370910|ref|ZP_04986915.1| inner-membrane protein [Francisella tularensis subsp. tularensis FSC033] gi|254874228|ref|ZP_05246938.1| inner-membrane protein [Francisella tularensis subsp. tularensis MA00-2987] gi|81677123|sp|Q5NI56|OXAA_FRATT RecName: Full=Inner membrane protein oxaA gi|122971083|sp|Q14JK8|OXAA_FRAT1 RecName: Full=Inner membrane protein oxaA gi|166975867|sp|A4J015|OXAA_FRATW RecName: Full=Inner membrane protein oxaA gi|56603882|emb|CAG44866.1| Inner-membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320194|emb|CAL08249.1| Inner-membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134050445|gb|ABO47516.1| inner-membrane protein of unknown function [Francisella tularensis subsp. tularensis WY96-3418] gi|151569153|gb|EDN34807.1| inner-membrane protein [Francisella tularensis subsp. tularensis FSC033] gi|254840227|gb|EET18663.1| inner-membrane protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282158529|gb|ADA77920.1| hypothetical protein NE061598_01330 [Francisella tularensis subsp. tularensis NE061598] Length = 551 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 149/575 (25%), Positives = 263/575 (45%), Gaps = 56/575 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ + ++ + +N + N+ + A Sbjct: 10 LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69 Query: 66 SM-------SPRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + ++L +L+ Y + + +P+ L S ++ Sbjct: 70 ETNFSKYDNAKSITINTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE- 176 Y A+ V I + + + +GK + + L +A+ + RT + D+ Sbjct: 130 --YIAKSTIVVNKQPISVNFEDQGIKIENGKQI-----LTLT-GSADGLQITRTYTFDDT 181 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF------GVQEGFIAVLGDKSLV 230 Y + + N + + R + G S Sbjct: 182 KYNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFR 241 Query: 231 EQKYSDIEKSSISNF---HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 ++ + DI K++ + W+ Y+ S +IP S +++ Y + ++A Sbjct: 242 KESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIP---QSTNAKIYYKNLNGDVFEA 298 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 TI P +S ++ L+ G I DLA P E +D+G F ++ +F Sbjct: 299 GAFTGA-TIAPNQSENISSILYTGP----IIKANLVDLA-PNLEKTLDYGMLSFFSEIIF 352 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 353 WVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKDD- 411 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 412 RQALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSM 471 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP + P++M LSMF+Q K+SP PAD QA ++ ++PV+F Sbjct: 472 KDPYFVL-------------------PVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIF 512 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 513 TFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|118496688|ref|YP_897738.1| membrane protein of unknown function [Francisella tularensis subsp. novicida U112] gi|194323997|ref|ZP_03057772.1| 60Kd inner membrane protein [Francisella tularensis subsp. novicida FTE] gi|166975866|sp|A0Q419|OXAA_FRATN RecName: Full=Inner membrane protein oxaA gi|118422594|gb|ABK88984.1| conserved membrane protein of unknown function [Francisella novicida U112] gi|194321894|gb|EDX19377.1| 60Kd inner membrane protein [Francisella tularensis subsp. novicida FTE] Length = 551 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 149/575 (25%), Positives = 262/575 (45%), Gaps = 56/575 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ + ++ + +N + N+ + A Sbjct: 10 LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69 Query: 66 SM-------SPRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + ++L +L+ Y + + +P+ L S ++ Sbjct: 70 ETNFSKYDNAKSITINTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE- 176 Y A+ V I + + +GK + + L +A+ + RT + D+ Sbjct: 130 --YIAKSTIVVNKQPISVNFEDQGIKTENGKQI-----LTLT-GSADGLQITRTYTFDDT 181 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF------GVQEGFIAVLGDKSLV 230 Y + + N + + R + G S Sbjct: 182 KYNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFR 241 Query: 231 EQKYSDIEKSSISNF---HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 ++ + DI K++ + W+ Y+ S +IP S +++ Y + ++A Sbjct: 242 KESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIP---QSTNAKIYYKNLNGDVFEA 298 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 TI P +S ++ L+ G I DLA P E +D+G F ++ +F Sbjct: 299 GAFTGA-TIAPNQSENISSILYTGP----IIKANLVDLA-PNLEKTLDYGMLSFFSEIIF 352 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 353 WVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKDD- 411 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 412 RQALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSM 471 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP + P++M LSMF+Q K+SP PAD QA ++ ++PV+F Sbjct: 472 KDPYFVL-------------------PVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIF 512 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 513 TFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|254372056|ref|ZP_04987549.1| hypothetical protein FTCG_01195 [Francisella tularensis subsp. novicida GA99-3549] gi|151569787|gb|EDN35441.1| hypothetical protein FTCG_01195 [Francisella novicida GA99-3549] gi|328676141|gb|AEB27011.1| OxaI/YidC membrane insertion protein [Francisella cf. novicida Fx1] Length = 551 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 149/575 (25%), Positives = 262/575 (45%), Gaps = 56/575 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ + ++ + +N + N+ + A Sbjct: 10 LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69 Query: 66 SM-------SPRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + ++L +L+ Y + + +P+ L S ++ Sbjct: 70 ETNFSKYDNAKSITINTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE- 176 Y A+ V I + + +GK + + L +A+ + RT + D+ Sbjct: 130 --YIAKSTIVVNKQPISVNFEDQGIKTENGKQI-----LTLT-GSADGLQITRTYTFDDT 181 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF------GVQEGFIAVLGDKSLV 230 Y + + N + + R + G S Sbjct: 182 KYNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFR 241 Query: 231 EQKYSDIEKSSISNF---HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 ++ + DI K++ + W+ Y+ S +IP S +++ Y + ++A Sbjct: 242 KESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIP---QSTNAKIYYKNLNGNVFEA 298 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 TI P +S ++ L+ G I DLA P E +D+G F ++ +F Sbjct: 299 GAFTGA-TIAPNQSENISSILYTGP----IIKANLVDLA-PNLEKTLDYGMLSFFSEIIF 352 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 353 WVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKDD- 411 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 412 RQALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSM 471 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP + P++M LSMF+Q K+SP PAD QA ++ ++PV+F Sbjct: 472 KDPYFVL-------------------PVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIF 512 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 513 TFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|254521534|ref|ZP_05133589.1| inner membrane protein OxaA [Stenotrophomonas sp. SKA14] gi|219719125|gb|EED37650.1| inner membrane protein OxaA [Stenotrophomonas sp. SKA14] Length = 571 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 144/590 (24%), Positives = 254/590 (43%), Gaps = 58/590 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF-----------YVYPRIEEMNNERKNIQTVKQPNQV 49 M + + + L V ++ W + + + QV Sbjct: 1 MNQTRVFLIFAWLMVAVLL-WMEWSREKAAPTPAPTTTSAPAAAQSVPGSSPGAIPSAQV 59 Query: 50 DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + + +A A S RV + L ++ G + D L + SP V Sbjct: 60 PGAPGQAAVQAQASATPASQRVTVTTDVLRLVLD--GGRVLDAELLQFPQTKDEGSPPVR 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNAN 164 LL+ + + Y A + S N +P ++ + I V+ N Sbjct: 118 LLT-EDPAHPYSAISGWASEDKNTPVPGADGFKLVGDTNDFVLAKGQNELQIPFVWTADN 176 Query: 165 NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE 218 + +RT+++ + Y + D V+N + R + T ++F Sbjct: 177 GVTIKRTLTVSRNEYAVRFKDEVSNTGTAPWNGYVYRTLDRTPTILSRSMTNPDSFS-FN 235 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G DK + + D + N + + WL + ++ + +IP K+ + H + Sbjct: 236 GATWYDNDKKYQRRAFKDYLEDGTLNQNITGGWLAMLQHHFFTAWIPQKDQTAHYVLSQV 295 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + R + T+ PG+S +T L+ G K I +P + ++D+ Sbjct: 296 A---GRDLIEARGPAFTVAPGQSTSTEARLWVGPKLVNLIAK----EDVPGLDRVVDYSR 348 Query: 339 FY---FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 F I + +F +++ + LVGN+G AI+ V +KL+ +PL+ QY S A M+ QP+ Sbjct: 349 FSMMAVIGQGLFWVLNQVHKLVGNWGWAIVGLVVLLKLVLYPLSATQYKSGAKMRRFQPR 408 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I +L+E++ Q Q AM++LYK INP+ GC PIL+Q+P+FFA+Y V+ S+E+R Sbjct: 409 IAQLKERYGDD-RQKFQTAMMELYKKEKINPMGGCLPILIQMPIFFALYWVLVESVELRQ 467 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 AP++GWI+DL A DP I P+I M+ K++P P D Sbjct: 468 APWFGWIQDLTARDPYFIL-------------------PVINVAVMWFTQKLTPAPGMDP 508 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q ++ +MP+VF ++ P+GL++YW + + ++QQ + K HG E Sbjct: 509 MQQKMMQFMPLVFGVMMAFMPSGLVLYWVVNGGLGLLQQWWMTKRHGGEP 558 >gi|171464337|ref|YP_001798450.1| 60 kDa inner membrane insertion protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|254773010|sp|B1XSN7|OXAA_POLNS RecName: Full=Inner membrane protein oxaA gi|171193875|gb|ACB44836.1| 60 kDa inner membrane insertion protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 557 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 161/588 (27%), Positives = 274/588 (46%), Gaps = 55/588 (9%) Query: 1 MERNWNYF-VAIALSVIIVYA-WQNFYVYPR--------IEEMNNERKNIQTVKQPNQVD 50 M+ F A ++S +++Y WQ P + ++ V P Q+ Sbjct: 1 MDFKKTIFWAAFSMSGLMLYNNWQVHEGKPSLFGGAPASAPAVADKATTNNKVDVPTQIS 60 Query: 51 NSYAAVLIDD-RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + + A+ + + L+N L+ I+ GA D L +++ + V Sbjct: 61 GAPSVAATPIINGGAIESAEKFTLQNDVLVLEISASGANVIDAKLLK---SLTAENKPVE 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 L + YFA VS NN +LPN + + L+ P + N + E Sbjct: 118 LF-QYTPTHKYFARSGLVS-LNNNDLPNHTSTFKLVQSGKDGSGRPFAVFASERNGVRLE 175 Query: 170 RTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFI 221 +T L+ Y+ + VT ++ + I+R P + G + Sbjct: 176 KTFILNPGSYVVDVGHRVTQSTSNPNPLVLYTEIVRDASQEQKIGPFGGAFSANTFTGPV 235 Query: 222 AVLGDKSLVEQKYSDIEKSSIS----NFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 A + + ++S I+K+ I+ +W+ + Y+AS +IP + + Sbjct: 236 AYTDKEKFNKLEFSAIDKNKITIPTLVAAGEPAWIAMVQHYFASAWIPGDKVARDIYTGR 295 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + +G Y+ + PG ++ LF G +E + P FE+L D+G Sbjct: 296 IDNG--LYRIGMQTPLGMVGPGSTVVEKAKLFVGPQEERVLETI-----APGFELLKDYG 348 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +AKP+F L+ + VGN+G +I+L T+ +KL+FFPL+ Y S A MK +QP++ Sbjct: 349 YLTILAKPIFWLLDNIHFYVGNWGWSIILLTILIKLVFFPLSAASYKSMARMKEVQPRLV 408 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ++E++K PQ L +AM+++Y+ INPL GC P+++QIPVF ++Y V+ S+E R AP Sbjct: 409 AMKEQYKG-EPQKLNQAMMEMYRKEKINPLGGCLPVVIQIPVFISLYWVLLSSVETRGAP 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DL+ DP I P+IM++SMF+Q K++P P D QA Sbjct: 468 WILWIHDLSVPDPYYIL-------------------PVIMAVSMFVQTKLNPTPPDPIQA 508 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 ++ +MP+VF FPAGL++YW +N++SI QQ I +M G + Sbjct: 509 KVMMYMPIVFSVMFFFFPAGLVLYWVVNNLLSIAQQWQINQMFGKKPA 556 >gi|194367815|ref|YP_002030425.1| putative inner membrane protein translocase component YidC [Stenotrophomonas maltophilia R551-3] gi|254778165|sp|B4SPG0|OXAA_STRM5 RecName: Full=Inner membrane protein oxaA gi|194350619|gb|ACF53742.1| 60 kDa inner membrane insertion protein [Stenotrophomonas maltophilia R551-3] Length = 571 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 144/590 (24%), Positives = 254/590 (43%), Gaps = 58/590 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF-----------YVYPRIEEMNNERKNIQTVKQPNQV 49 M + + + L V ++ W + + QV Sbjct: 1 MNQTRVFLIFAWLMVAVLL-WMEWSREKAAPTPAPTTTSAPAAAQSVPGATPGSVPNAQV 59 Query: 50 DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + + +A A S RV + L ++ G + D L + SP V Sbjct: 60 PGAPGQAAVQAQASATPASQRVTVTTDVLRLVLD--GGRVLDAELLQFPQTKDEGSPPVR 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNAN 164 LL+ + + Y A + S N +P ++ + K I V+ + Sbjct: 118 LLT-EDPAHPYSAISGWASEDKNTPVPGADGFKLVGDTKDFVLAKGQNELQIPFVWTADS 176 Query: 165 NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE 218 + +RT+++ + Y + D V+N + R + T ++F Sbjct: 177 GVTIKRTLTVSRNEYAVRFKDEVSNTGAAPWNGYVYRTLDRTPTILSRSMTNPDSFS-FN 235 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G DK + + D + N + + WL + ++ + +IP K+ + H + Sbjct: 236 GATWYDNDKKYQRRAFKDYLEDGTLNQNITGGWLAMLQHHFFTAWIPQKDQTAHYVLSQV 295 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + R + T+ PG+S +T L+ G K I +P + ++D+ Sbjct: 296 A---GRDLIEARGPAFTVAPGQSTSTEARLWVGPKLVNLIAK----EDVPGLDRVVDYSR 348 Query: 339 FY---FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 F I + +F +++ + LVGN+G AI+ V +KL+ +PL+ QY S A M+ QP+ Sbjct: 349 FSMMAVIGQGLFWVLNQVHKLVGNWGWAIVGLVVLLKLVLYPLSATQYKSGAKMRRFQPR 408 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I +L+E++ Q Q AM++LYK INP+ GC PIL+Q+P+FFA+Y V+ S+E+R Sbjct: 409 IAQLKERYGDD-RQKFQTAMMELYKKEKINPMGGCLPILIQMPIFFALYWVLVESVELRQ 467 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 AP++GWI+DL A DP I P+I M+ K++P P D Sbjct: 468 APWFGWIQDLTARDPYFIL-------------------PVINVAVMWFTQKLTPAPGMDP 508 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q ++ +MP+VF ++ P+GL++YW + + ++QQ + K HG E Sbjct: 509 MQQKMMQFMPLVFGVMMAFMPSGLVLYWVVNGGLGLLQQWWMTKRHGGEP 558 >gi|254375202|ref|ZP_04990682.1| inner-membrane protein [Francisella novicida GA99-3548] gi|151572920|gb|EDN38574.1| inner-membrane protein [Francisella novicida GA99-3548] Length = 551 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 148/575 (25%), Positives = 262/575 (45%), Gaps = 56/575 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ + ++ + +N + N+ + A Sbjct: 10 LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69 Query: 66 SM-------SPRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + ++L +L+ Y + + +P+ L S ++ Sbjct: 70 ETNFSKYDNAKSITINTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE- 176 Y A+ V I + + +GK + + L +A+ + RT + D+ Sbjct: 130 --YIAKSTIVVNKQPISVNFEDQGIKTENGKQI-----LTLT-GSADGLQITRTYTFDDT 181 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF------GVQEGFIAVLGDKSLV 230 Y + + N + + R + G S Sbjct: 182 KYNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFR 241 Query: 231 EQKYSDIEKSSISNF---HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 ++ + DI K++ + W+ Y+ S +IP S +++ Y + ++A Sbjct: 242 KESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIP---QSTNAKIYYKNLNGNVFEA 298 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 TI P +S ++ L+ G I DLA P E +D+G F ++ +F Sbjct: 299 GAFTGA-TIAPNQSENISSILYTGP----IIKANLVDLA-PNLEKTLDYGMLSFFSEIIF 352 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 353 WVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKDD- 411 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R +PF WI DL+ Sbjct: 412 RQALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQSPFIFWIHDLSM 471 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP + P++M LSMF+Q K+SP PAD QA ++ ++PV+F Sbjct: 472 KDPYFVL-------------------PVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIF 512 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 513 TFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|187932218|ref|YP_001892203.1| hypothetical membrane protein [Francisella tularensis subsp. mediasiatica FSC147] gi|254772786|sp|B2SE60|OXAA_FRATM RecName: Full=Inner membrane protein oxaA gi|187713127|gb|ACD31424.1| hypothetical membrane protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 551 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 149/575 (25%), Positives = 263/575 (45%), Gaps = 56/575 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ + ++ + +N + N+ + A Sbjct: 10 LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69 Query: 66 SM-------SPRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + ++L +L+ Y + + +P+ L S ++ Sbjct: 70 ETNFSKYDNAKSITINTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE- 176 Y A+ V I + + + +GK + + L +A+ + RT + D+ Sbjct: 130 --YIAKSTIVVNKQPISVNFEDQGIKIENGKQI-----LTLT-GSADGLQITRTYTFDDT 181 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF------GVQEGFIAVLGDKSLV 230 Y + + N + + R + G S Sbjct: 182 KYNISVSQNIKNTTSAPVNVIVDDSFARGFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFR 241 Query: 231 EQKYSDIEKSSISNF---HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 ++ + DI K++ + W+ Y+ S +IP S +++ Y + ++A Sbjct: 242 KESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIP---QSTNAKIYYKNLNGDVFEA 298 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 TI P +S ++ L+ G I DLA P E +D+G F ++ +F Sbjct: 299 GAFTGA-TIAPNQSENISSILYTGP----IIKANLVDLA-PNLEKTLDYGMLSFFSEIIF 352 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 353 WVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKDD- 411 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 412 RQALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSM 471 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP + P++M LSMF+Q K+SP PAD QA ++ ++PV+F Sbjct: 472 KDPYFVL-------------------PVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIF 512 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 513 TFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|254509058|ref|ZP_05121161.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus 16] gi|219547991|gb|EED25013.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus 16] Length = 448 Score = 402 bits (1032), Expect = e-109, Method: Composition-based stats. Identities = 134/474 (28%), Positives = 224/474 (47%), Gaps = 41/474 (8%) Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PT 153 ++ S V L + + + A+ V I+L ++N +S T Sbjct: 2 AEMDSADAFVLL--KNEPGHQFIAQSGLVGPQG-IDLSSTNRPAYAVSTDSFTLADGQDE 58 Query: 154 TPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212 + + + AN + + +T L Y + V NNS + F + ++ + Sbjct: 59 LRVPMTY-AANGLEYTKTFILKRGSYAIDVEYNVVNNSGNNATFGMYAHLRQNLLDAGGS 117 Query: 213 -TFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETS 270 T G D + + D++ ++S N + W + Y+AS +IP E Sbjct: 118 ITMPTYRGGAYSTEDTRYKKYSFEDMQDRNLSLNLPDGQGWAAMIQHYFASAWIPRNEPG 177 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + + + + TI G S T L+ G K + P Sbjct: 178 TNLYTRVIGNLGD---IGVRMPNKTIATGDSAQMTATLWVGPKLQDQMAEV-----APNL 229 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++++D+GW +FIAKP+ L+S+ + VGN+G+AI+ T V+ +PL K QY S A M+ Sbjct: 230 DLVVDYGWLWFIAKPLHSLLSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 289 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QPK+ +RE+ Q + + M++LYK +NPL GC P++LQ+P+F A+Y + S Sbjct: 290 MLQPKLQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMES 348 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+RH+PF+GWI DL+A DP I P++M SMF+ KMSP Sbjct: 349 VELRHSPFFGWIHDLSAQDPYYIL-------------------PLLMGASMFLIQKMSPT 389 Query: 511 P-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K + Sbjct: 390 TVTDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 443 >gi|283851181|ref|ZP_06368464.1| 60 kDa inner membrane insertion protein [Desulfovibrio sp. FW1012B] gi|283573350|gb|EFC21327.1| 60 kDa inner membrane insertion protein [Desulfovibrio sp. FW1012B] Length = 530 Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats. Identities = 159/566 (28%), Positives = 252/566 (44%), Gaps = 54/566 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N +A+ LS+ ++ W + P + QT Q A A Sbjct: 2 ENKRVILAVVLSLAVLVGWNFLF--PAKPQAPKTDTPTQTEAPTAQAPAPAAQRAETLPA 59 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 A + +V + P N G + +L+GY ++ +SP+V L+ N K A Sbjct: 60 FAPTPGRKVTVNTPLYTAVFNSAGGVLEQFSLKGYRQTIAPDSPLVDLV---NAKAQLKA 116 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKI-LTPTTPIKLVFKNANN-ILFERTISLDE-HYL 179 L + N W++ G + L L F L RT++ YL Sbjct: 117 PLGLIVNGTPT---WQNVEWSVEGGDLKLDAAGAGSLSFTGRLGDTLIRRTLTFSGASYL 173 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 +++N ++ + + A +++ + A D L + +S+ +K Sbjct: 174 IDEKLSLSNTGAAPVKDRLSLTVAVDRLSAADDSYNPTQ---AAFYDTGL--ELFSNEKK 228 Query: 240 -SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + + W + Y+ IP E ++ + I I Sbjct: 229 LAEGMTDEKPVQWGAVMSNYFLVGIIPEAEGLR----GKAKFEDEIFRVALDKDGIEIPA 284 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G + G K+ + +LA ID+GWF FIAKP+ L+ +FY+ VG Sbjct: 285 GGRTDLDVRYYLGPKDPKFLAQAPHNLAA-----AIDYGWFDFIAKPLLKLLHFFYDYVG 339 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+L TV +K LF+PL+ K Y S MK +QP + +LREK K Q + + M+QL Sbjct: 340 NYGVAIILLTVLIKGLFWPLSHKSYKSMEQMKRLQPLLTQLREKHKDD-RQKMNEEMMQL 398 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIKDLAAADP 470 YKT+ +NP GC P+++QIPVFF +Y+ + S+E+RHAPF W+ DL+A DP Sbjct: 399 YKTYKVNPAGGCLPMIVQIPVFFGLYQALLHSIELRHAPFIAHLPFTNMIWLADLSAKDP 458 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I P++M +MF+Q KM+P P D QA ++ MPV+F F Sbjct: 459 YYIT-------------------PLVMGATMFLQQKMTPAPGDPTQAKVMLLMPVIFTFM 499 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVI 556 +FP+GL++YW +NVISI QQ + Sbjct: 500 FLNFPSGLVVYWLVNNVISIAQQYWM 525 >gi|89255612|ref|YP_512973.1| inner-membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115314117|ref|YP_762840.1| inner membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|156501560|ref|YP_001427625.1| inner-membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010123|ref|ZP_02275054.1| inner-membrane protein [Francisella tularensis subsp. holarctica FSC200] gi|254367007|ref|ZP_04983043.1| conserved inner-membrane protein [Francisella tularensis subsp. holarctica 257] gi|290953728|ref|ZP_06558349.1| inner membrane protein oxaA [Francisella tularensis subsp. holarctica URFT1] gi|295312914|ref|ZP_06803635.1| inner membrane protein oxaA [Francisella tularensis subsp. holarctica URFT1] gi|122325838|sp|Q0BNY1|OXAA_FRATO RecName: Full=Inner membrane protein oxaA gi|122501296|sp|Q2A5M8|OXAA_FRATH RecName: Full=Inner membrane protein oxaA gi|166975865|sp|A7N9L6|OXAA_FRATF RecName: Full=Inner membrane protein oxaA gi|89143443|emb|CAJ78619.1| Inner-membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115129016|gb|ABI82203.1| inner membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|134252833|gb|EBA51927.1| conserved inner-membrane protein [Francisella tularensis subsp. holarctica 257] gi|156252163|gb|ABU60669.1| inner-membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 551 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 148/575 (25%), Positives = 263/575 (45%), Gaps = 56/575 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ + ++ + +N + N+ + + A Sbjct: 10 LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTITDAKSSLAK 69 Query: 66 SM-------SPRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + ++L +L+ Y + + +P+ L S ++ Sbjct: 70 ETNFSKYDNAKSITINTVVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE- 176 Y A+ V I + + + + K + + L +A+ + RT + D+ Sbjct: 130 --YIAKSTIVVNKQPISVNFEDQGIKIENSKQI-----LTLT-GSADGLQITRTYTFDDT 181 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF------GVQEGFIAVLGDKSLV 230 Y + + N + + R + G S Sbjct: 182 KYNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFR 241 Query: 231 EQKYSDIEKSSISNF---HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 ++ + DI K++ + W+ Y+ S +IP S +++ Y + ++A Sbjct: 242 KESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIP---QSTNAKIYYKNLNGDVFEA 298 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 TI P +S ++ L+ G I DLA P E +D+G F ++ +F Sbjct: 299 GAFTGA-TIAPNQSENISSILYTGP----IIKANLVDLA-PNLEKTLDYGMLSFFSEIIF 352 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 353 WVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKDD- 411 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 412 RQALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSM 471 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP + P++M LSMF+Q K+SP PAD QA ++ ++PV+F Sbjct: 472 KDPYFVL-------------------PVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIF 512 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 513 TFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|254368609|ref|ZP_04984625.1| inner-membrane protein [Francisella tularensis subsp. holarctica FSC022] gi|157121512|gb|EDO65703.1| inner-membrane protein [Francisella tularensis subsp. holarctica FSC022] Length = 551 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 151/577 (26%), Positives = 261/577 (45%), Gaps = 60/577 (10%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ P N ++ V D +L Sbjct: 10 LLVTIAIMFISLMGKWEQ--TSPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSL 67 Query: 66 SM---------SPRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + + + + ++L +L+ Y + + +P+ L S Sbjct: 68 AKETNFSKYDNAKSITINTVVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSG 127 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 ++ Y A+ V I + + + +GK + + L +A+ + RT + D Sbjct: 128 SE--YIAKSTIVVNKQPISVNFEDQGIKIENGKQI-----LTLT-GSADGLQITRTYTFD 179 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF------GVQEGFIAVLGDKS 228 + Y + + N + + R + G S Sbjct: 180 DTKYNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDS 239 Query: 229 LVEQKYSDIEKSSISNF---HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 ++ + DI K++ + W+ Y+ S +IP S +++ Y + + Sbjct: 240 FRKESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIP---QSTNAKIYYKNLNGDVF 296 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 +A TI P +S ++ L+ G I DLA P E +D+G F ++ Sbjct: 297 EAGAFTGA-TIAPNQSENISSILYTGP----IIKANLVDLA-PNLEKTLDYGMLSFFSEI 350 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 351 IFWVMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD 410 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL Sbjct: 411 D-RQALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDL 469 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 + DP + P++M LSMF+Q K+SP PAD QA ++ ++PV Sbjct: 470 SMKDPYFVL-------------------PVLMGLSMFLQQKLSPAPADPMQAKVMMFLPV 510 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +F F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 511 IFTFLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|255020154|ref|ZP_05292223.1| OxaI/YidC membrane insertion protein [Acidithiobacillus caldus ATCC 51756] gi|254970296|gb|EET27789.1| OxaI/YidC membrane insertion protein [Acidithiobacillus caldus ATCC 51756] Length = 538 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 153/582 (26%), Positives = 259/582 (44%), Gaps = 62/582 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 M+ +A+ LS+I++ ++ + Q+ Sbjct: 1 MDTQR-TLLAVVLSIIVLVLYEQWMAPKPTHPAAAPTAVTQSATAKPAPAPTSATATAPS 59 Query: 52 -------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 S L+ +P V GS++L G L L+ Y S Sbjct: 60 TSAAATLSGTVTSGLASPAELAAAPSVPFATQVYQGSVSLLGGDIVHLGLKHYPTSSSDK 119 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +P L S + + + I L L T L+F+ Sbjct: 120 APYPILTPES--ARLTLQQSGFRALDGQI----------LQGRYRLLQDTGHTLIFQGEA 167 Query: 165 N-ILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 + E+T+ + YL VTN S +I+R+ + + G + Sbjct: 168 GPLRIEKTLEFAPDSYLIHETVRVTNGGSSDWNGSYLDQILRNDRSESHWFMSIFTGAV- 226 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 ++ + S E+ +SD+ + W G++D Y+ +P + + + Sbjct: 227 LMHNGSFSEKSFSDLRSHPEDW--SGSGWAGMTDHYFLEAILPEPKATGQIYARAEGPNS 284 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 A + + PG+S T L+ G KE T+ + L E +D+GWF I Sbjct: 285 V---AGVAVALPRLAPGQSTTIEQDLYLGPKEQKTLSSLGRGL-----EQTVDYGWFAII 336 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A+PM ++S+F++ GN+G+AI+L + VK+LFF + Y S ANM+ +QPK+++++++ Sbjct: 337 AEPMHGVLSWFHSWTGNWGLAIVLLVLAVKILFFYPSAISYRSMANMRKLQPKLEQIKKQ 396 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + + Q + AM++LY++ +NP+AGC PI++Q+PVF A+Y V+ S+ +R APF WI Sbjct: 397 YGED-RQKMGAAMMELYRSEKVNPMAGCLPIVIQMPVFIALYWVLVESVSLRMAPFVLWI 455 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DLAA DP I P++M +SMFIQ +++P P D Q IL+ Sbjct: 456 HDLAAPDPYYIL-------------------PLLMGVSMFIQQRLNPAPMDPMQKKILSA 496 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +PV+F S FPAGL++YW +NV+SI QQ +I + E+ Sbjct: 497 LPVIFAIFFSFFPAGLVLYWLTNNVVSIAQQYLITRHVMKEV 538 >gi|289826408|ref|ZP_06545520.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 485 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 116/495 (23%), Positives = 214/495 (43%), Gaps = 43/495 (8%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTMQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVSTANNIELPNS--------NTVWNLISGKILTPTTPIKLVFKNANNILFER 170 Y A+ N + L G+ + + + +A F + Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQ---NELQVPMTYTDAAGNTFTK 163 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIA 222 T Y + +V N + S G++ + T ++ F + G Sbjct: 164 TFVFKRGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAY 223 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 224 STPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGN 281 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI Sbjct: 282 GIVAIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFI 336 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 ++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 337 SQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRER 396 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI Sbjct: 397 LGDDK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWI 455 Query: 463 KDLAAADPTNIFTLF 477 DL+A DP I + Sbjct: 456 HDLSAQDPYYILPIL 470 >gi|190576475|ref|YP_001974320.1| putative inner membrane protein translocase component YidC [Stenotrophomonas maltophilia K279a] gi|254778166|sp|B2FPA5|OXAA_STRMK RecName: Full=Membrane protein oxaA gi|190014397|emb|CAQ48045.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a] Length = 571 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 146/590 (24%), Positives = 253/590 (42%), Gaps = 58/590 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID- 59 M + + + L V ++ W + + Q N A Sbjct: 1 MNQTRVFLIFAWLMVAVLL-WMEWSREKAAPTPAPTTTSAPAAAQSVPGANPGAIPSAQV 59 Query: 60 ----------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 +A A S RV + L ++ G + D L + SP V Sbjct: 60 PGAPGQAAAQAQASATPASQRVTVTTDVLRLVLD--GGRVLDAELLQFPQTKDEGSPPVR 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNAN 164 LL+ + + Y A + S N +P ++ + K I V+ N Sbjct: 118 LLT-EDPAHPYSAISGWASEDRNTPVPGADGFKLVGDTKDFVLAKGQNELQIPFVWTADN 176 Query: 165 NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE 218 + +RT+++ + Y + D V+N + R + T ++F Sbjct: 177 GVTIKRTLTVSRNEYAVRFKDEVSNAGAAPWNGYVYRTLDRTPTILSRSMTNPDSFS-FN 235 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G DK + + D + N + + WL + ++ + +IP K+ + H + Sbjct: 236 GATWYDNDKKYQRRAFKDYLEDGTLNQNITGGWLAMLQHHFFTAWIPQKDQTAHYVLSQV 295 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + R + T+ PG+S +T L+ G K I +P + ++D+ Sbjct: 296 A---GRDLIEARGPAFTVAPGQSTSTEARLWVGPKLVNLIAK----EDVPGLDRVVDYSR 348 Query: 339 FY---FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 F I + +F +++ + LVGN+G AI+ V +KL+ +PL+ QY S A M+ QP+ Sbjct: 349 FSMMAVIGQGLFWVLNQVHKLVGNWGWAIVGLVVLLKLVLYPLSATQYKSGAKMRRFQPR 408 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I +L+E++ Q Q AM++LYK INP+ GC PIL+Q+P+FFA+Y V+ S+E+R Sbjct: 409 IAQLKERYGDD-RQKFQTAMMELYKKEKINPMGGCLPILIQMPIFFALYWVLVESVELRQ 467 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 AP++GWI+DL A DP I P+I M+ K++P P D Sbjct: 468 APWFGWIQDLTARDPYFIL-------------------PVINVAVMWFTQKLTPAPGMDP 508 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q ++ +MP+VF ++ P+GL++YW + + ++QQ + K HG E Sbjct: 509 MQQKMMQFMPLVFGVMMAFMPSGLVLYWVVNGGLGLLQQWWMTKRHGGEP 558 >gi|303325515|ref|ZP_07355958.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp. 3_1_syn3] gi|302863431|gb|EFL86362.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp. 3_1_syn3] Length = 551 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 149/582 (25%), Positives = 255/582 (43%), Gaps = 57/582 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQN------FYVYPRIEEMNNERKNIQTVKQPNQVDNSYA 54 M+ + N +AI L ++I++ W + P + +++ ++ + A Sbjct: 1 MQDSKNLILAIVLCLVILFGWGRLAEYMGWVQTPDPAAVAQQQEAVRQEAVKAEQRKEEA 60 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 A A + + + +P G L+ + ++ +SP+V ++ Sbjct: 61 AKAATLPAFTPAPGRDLTVDSPLYEAVFYTGGGPLRSFKLKKFQTGLAPDSPLVNMVDER 120 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI-----LTPTTPIKLVFKNANNILFE 169 A L V N + S W+L SG+ ++LV N + Sbjct: 121 TAA---VAPLGLVI---NSQPSWSTGQWSLDSGEQNLKLDAGQQGALRLVGVVDN-LRVI 173 Query: 170 RTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 R ++ + + YL K + N + A + +A D S Sbjct: 174 RELTFNADSYLIKEKIRLINAGDQPRSVRVSYTVASDASNAAGGRYDSMR--VAWDNDGS 231 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 L E+ S +S+ W G Y+ S +P + + + Y+ Sbjct: 232 LSEESSSKTLESTGVQATGKIYWAGAMSTYFLSAVLPGETNNVTVKGLLQK---TVYRTA 288 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 E + PG+ T + G K+ + LA ID G F IAK + Sbjct: 289 VEEPENLLAPGQEKELTVSYWLGPKDRTQLLAVSDQLA-----KSIDLGMFSIIAKGLLW 343 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ +F+ V N+G+AI+L T+ +K +F+PL K Y S MK +QP + +REK+K + Sbjct: 344 LLEFFHKYVHNWGVAIILLTIVIKAVFWPLTAKSYASMEKMKKLQPMMTAIREKYKDNK- 402 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------G 460 +++ K ++ LYKT+ +NP +GC PIL+Q+PVFF +Y+ + S+E+RHAPF Sbjct: 403 ELMNKEVMALYKTYGVNPASGCVPILIQLPVFFGLYQALLTSIELRHAPFIMYLPFTDKL 462 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 W+ DL+A DP I P+IM L+MF+Q +MSPP D Q I+ Sbjct: 463 WLADLSAKDPYYIT-------------------PVIMGLTMFLQQRMSPPATDPTQQKIM 503 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++P++F FP+GL+IYW +N++SI QQ ++M+ + A Sbjct: 504 MFLPLIFTVLFLGFPSGLVIYWLVNNILSIFQQWLMMRKNKA 545 >gi|39998555|ref|NP_954506.1| hypothetical protein GSU3466 [Geobacter sulfurreducens PCA] gi|81700814|sp|Q746Q2|OXAA_GEOSL RecName: Full=Inner membrane protein oxaA gi|39985502|gb|AAR36856.1| membrane protein, putative [Geobacter sulfurreducens PCA] gi|298507497|gb|ADI86220.1| preprotein translocase subunit YidC [Geobacter sulfurreducens KN400] Length = 531 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 159/561 (28%), Positives = 269/561 (47%), Gaps = 41/561 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME +A+ LS++ Y + + P E Q+ QV + V + Sbjct: 1 ME--KRALIAVVLSILFFYGYTALFSPPPKETPKPVATATQSQPA-QQVTAAPVPVAVPA 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + Q + V + P+ + + +G L+L+ YH VTL+S N N Sbjct: 58 QPQPAVAARDVSVDTPAYSVTFSTQGGSIKRLDLKRYHETAGPGGKNVTLVSEDNPSNYT 117 Query: 121 FAE--LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EH 177 + N + +P+++ + + G+ + + + + +T + + Sbjct: 118 IGLRAPGFGLDQNAVFVPSADAL-TVGPGEK----KQLSFTWVSPAGVTVTKTYNFSGDG 172 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y +I VTN+ ++ SP + + + A L E K D+ Sbjct: 173 YGLEIQYQVTNSGSARVS-SPVQTVQTYPLVPKVKESRFETFGPATFAQDKLFEDKVKDL 231 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 E + H + W G +DKY+ S + + + + + + G+ + S+ E+++ Sbjct: 232 ESG--AKTHAAPLWSGFADKYFLSAVLAHEGSMAAATIRKTASGY--LENTISSPELSLN 287 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PG+ T LF G K+ + L E I+ GWF +AKP+ + +F+N Sbjct: 288 PGEGRALTYRLFFGPKDIDVLKAQGNSL-----ERAINLGWFAMLAKPLLHSLKFFHNYT 342 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+GIAI++ TV +K++F+PL Y S M+ +QPK+ +LREK+K + + +AM++ Sbjct: 343 GNYGIAIIIITVIIKVIFYPLTHSSYKSMKEMQKLQPKMQQLREKYKND-REAMNRAMME 401 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LY+TH +NP+ GC P+L+QIPVFFA+YK + S+E+RHAPF WI DLAA DP + Sbjct: 402 LYQTHKVNPVGGCLPMLVQIPVFFALYKALMFSIELRHAPFMLWITDLAAKDPYYVT--- 458 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 PIIM ++M IQ KM+P D Q ++ +PVVF F +FP+G Sbjct: 459 ----------------PIIMGVTMVIQQKMTPSQMDPVQQKMMMALPVVFTFMFLNFPSG 502 Query: 538 LIIYWSWSNVISIVQQAVIMK 558 L++YW +NV++I+QQ I + Sbjct: 503 LVLYWLVNNVLTIIQQYYINR 523 >gi|167626982|ref|YP_001677482.1| hypothetical protein Fphi_0760 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189036351|sp|B0TW73|OXAA_FRAP2 RecName: Full=Inner membrane protein oxaA gi|167596983|gb|ABZ86981.1| conserved membrane protein of unknown function [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 551 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 154/576 (26%), Positives = 268/576 (46%), Gaps = 58/576 (10%) Query: 7 YFVAIALSVIIVYA-WQNFYV------YPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 V IA+ +I + W+ + + +N N T N + A L Sbjct: 10 LLVTIAIMLISLMGRWEQTFPSNSSQSQTTQTQQDNSHYNSDTPATTNVSTSDAKASLTK 69 Query: 60 DRA-QALSMSPRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + V + I+L +L Y + + +P+ L ++ Sbjct: 70 TTSFSKYDDAKSVTINTDVFKNLKISLLDGAIISASLEDYSVSLDDKTPMALLTDEQGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG-KILTPTTPIKLVFKNANNILFERTISLDE 176 Y A+ V +++ + +G ++LT T + + + RT + D+ Sbjct: 130 --YIAKSTIVINKKPVDVNFESQGIKKENGKQVLTLTGSV-------DGLEITRTYTFDD 180 Query: 177 -HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF------GVQEGFIAVLGDKSL 229 Y + + N + + + + R + G + S Sbjct: 181 AKYNISVSQNIKNTTSEPVSVIIDDSLARDFNPAGDSFSLLNAHSYTFTGVAYSTANDSF 240 Query: 230 VEQKYSDIEKSSISNF---HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 ++ + DI K++ + W+ Y+ S +IP S S+ Y + + ++ Sbjct: 241 RKESFKDISKTNGQPTVINSQGLGWVAFIQHYFVSAWIP---QSNDSKIYYKNLNNDVFE 297 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 A I+I P +S + + L++G I DLA P E +D+G F ++ + Sbjct: 298 AGAYTG-ISIAPNQSESIDSVLYSGP----IIKANLVDLA-PNLEKTLDYGMLSFFSEII 351 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F +M+ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP++ L+E +K Sbjct: 352 FWVMNQIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRVKRLQETYKDD 411 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 QVL K M+++YK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 412 -RQVLGKKMMEMYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLS 470 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP + PI+M +SMF+Q K+SP PAD QA I+ ++PV+ Sbjct: 471 MKDPYFVL-------------------PILMGISMFLQQKLSPAPADPMQAKIMMFLPVI 511 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F F +SFP+GL++YW +NVISI+QQ +I + + A Sbjct: 512 FTFLFASFPSGLVLYWLTNNVISILQQWIITRHYQA 547 >gi|298369729|ref|ZP_06981046.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sp. oral taxon 014 str. F0314] gi|298282286|gb|EFI23774.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sp. oral taxon 014 str. F0314] Length = 544 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 137/574 (23%), Positives = 245/574 (42%), Gaps = 59/574 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A ++ I++ WQ + P+ + + + Q V + + A Sbjct: 1 MDSKRLVTFA-VIAFAILFGWQKLFPAPKPAQTQHAVQQQQAVAAKAEAALTAAVP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y +N V L + Y Sbjct: 56 ----------ITVTTDTVKAVIDEKSGDLRRLTLLKYKASGDANKDFV--LFDDGKDHTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L N + T ++L + A+ + ++ + YL Sbjct: 104 VAQAELLDAQGNNVLKNVGFTAPQKQYTLNGDKTEVRLSAE-ADGLKIDKVYTFTKGSYL 162 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDI 237 + VT+ I + R++R + + Q G + + + +SD+ Sbjct: 163 INVRFDVTDAGGKPINLTANYRVVRDSSKPEGQGYFTQSYVGPVVYTPEGQFEKVTFSDL 222 Query: 238 E------KSSISNFHESN-SWLGISDKYWASVFI--PSKETSFHS----QFKYLSDGHAR 284 + K+ H++N WLG+ + ++ + +I P + + Q G Sbjct: 223 DDDFKSGKNKAEYVHKTNSGWLGMIEHHFMATWILQPKDGQTVCAAGDCQIDIKRRGDNL 282 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A S + G + + L+AG + + + ++ D+G ++ A Sbjct: 283 YSAGVSVPMAAVAAGGKASVSMNLYAGPQTTSVLAGIAD-----KLQLAKDYGKVHWFAS 337 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ + L+GN+G +I+ T+ VK + +PL Y S A M+ + PK+ ++EK+ Sbjct: 338 PLFWLLNKLHELIGNWGWSIIALTIIVKAVLYPLTNASYRSMAKMRAVAPKLQAIKEKYG 397 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q +Q+YK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 398 DDRMAQQQAM-MQMYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 456 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I P+IM+ +MF Q ++PPP D QA ++ MP Sbjct: 457 LSRPDPFYIL-------------------PLIMAGTMFAQTFLNPPPTDPMQAKMMKIMP 497 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +VF FPAGL++YW +N+++I QQ I + Sbjct: 498 MVFSVMFFFFPAGLVLYWVVNNLLTIAQQWYINR 531 >gi|319788688|ref|YP_004148163.1| membrane protein insertase, YidC/Oxa1 family [Pseudoxanthomonas suwonensis 11-1] gi|317467200|gb|ADV28932.1| membrane protein insertase, YidC/Oxa1 family [Pseudoxanthomonas suwonensis 11-1] Length = 567 Score = 398 bits (1023), Expect = e-108, Method: Composition-based stats. Identities = 139/510 (27%), Positives = 230/510 (45%), Gaps = 49/510 (9%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 R+ + L ++ G +L + D + + V L + + Y A+ +VS Sbjct: 83 QRIVASSDVLQLVLD--GGSVVQADLLQFPRDRNGDGTAVRLFDTA-PASFYAAQSGWVS 139 Query: 129 TANNIELP-------NSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLF 180 + + L G + + V++ N + RT L Y Sbjct: 140 ASGAAPTHLSGFVPAEPQREYVLAEGA---DSVEVPFVWQGDNGVQIRRTYVLSRGAYAV 196 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF---IAVLGDKSLVEQKYS-D 236 + D V N + +++R KP + E F A D S +K+ D Sbjct: 197 TVRDEVVNAGSAPWQGQVYRQLVR-KPPVIERGYTSPESFSFNGAAWYDGSYDRRKFDED 255 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + N SN W+ + ++ + ++P+ + L R + AN + + Sbjct: 256 YIEDGKLNLQTSNGWVAMLQHHFFTAWLPAGTQ--QAGTISLDQVGDRALVREVANPLVV 313 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA---KPMFMLMSYF 353 PG + T+ L+ G K I +P E +D+ F +A + +F ++S+ Sbjct: 314 APGSTATSEARLYVGPKLVSEIRAQ----GVPGLERAVDYSQFTILAVLGEGLFWVLSHM 369 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y+L GN+G AI+ V VK L +PL+ QY S A M+ QP+I +L+E++ + Q Q Sbjct: 370 YDLFGNWGWAIIGLVVVVKALMYPLSAAQYKSFAKMRKFQPRIQQLKERYGED-RQKFQM 428 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 AM++LYK INP+ GC PIL+Q+PVF A+Y V+ S+E+RHAP+ WI+DL A DP I Sbjct: 429 AMMELYKKEKINPMGGCLPILVQMPVFLALYWVLVESVELRHAPWILWIQDLTARDPFFI 488 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 P+I M+ K+ P P D Q ++ +MP+VF ++ Sbjct: 489 L-------------------PVINVAVMWFTQKLQPAPGMDPMQQKMMQFMPLVFGVMMA 529 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 FPAGL++YW + + ++QQ +MK HG Sbjct: 530 FFPAGLVLYWVTNGALGLLQQWWMMKRHGE 559 >gi|241667555|ref|ZP_04755133.1| hypothetical protein FphipA2_02215 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876100|ref|ZP_05248810.1| inner-membrane protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842121|gb|EET20535.1| inner-membrane protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 551 Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats. Identities = 154/576 (26%), Positives = 269/576 (46%), Gaps = 58/576 (10%) Query: 7 YFVAIALSVIIVYA-WQNFYV------YPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 V IA+ +I + W+ + + +N N T N + A L Sbjct: 10 LLVTIAIMLISLMGRWEQTFPSNSSQSQTTQTQQDNSHYNSDTTATTNVSTSDAKASLTK 69 Query: 60 DRA-QALSMSPRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + V + I+L +L Y + + + +P+ L + ++ Sbjct: 70 TTSFSKYDDAKSVTINTDVFKNLKISLLDGAIISASLEDYSVSLDNKTPMALLTNEQGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG-KILTPTTPIKLVFKNANNILFERTISLDE 176 Y A+ V +++ + +G ++LT T + + + RT + D+ Sbjct: 130 --YIAKSTIVINKKPVDVNFESQGIKKENGKQVLTLTGSV-------DGLEITRTYTFDD 180 Query: 177 -HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF------GVQEGFIAVLGDKSL 229 Y I + N + + + + R + G + S Sbjct: 181 AKYNISISQNIKNTTSEPVNVIIDDSLARDFNPAGDSFSLLNAHSYTFTGVAYSTANDSF 240 Query: 230 VEQKYSDIEKSSISNF---HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 ++ + DI K++ + W+ Y+ S +IP S S+ Y + + ++ Sbjct: 241 RKESFKDISKTNGQPTVINSQGLGWVAFIQHYFVSAWIP---QSNDSKIYYKNLNNDVFE 297 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 A I+I P +S + + L++G I DLA P E +D+G F ++ + Sbjct: 298 AGAYTG-ISIAPNQSESIDSVLYSGP----IIKANLVDLA-PNLEKTLDYGMLSFFSEII 351 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F +M+ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP++ L+E +K Sbjct: 352 FWVMNQIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRVKRLQETYKDD 411 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q L K M+++YK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 412 -RQALGKKMMEMYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLS 470 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP + PI+M +SMF+Q K+SP PAD QA I+ ++PV+ Sbjct: 471 MKDPYFVL-------------------PILMGISMFLQQKLSPAPADPMQAKIMMFLPVI 511 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F F +SFP+GL++YW +NVISI+QQ +I + + A Sbjct: 512 FTFLFASFPSGLVLYWLTNNVISILQQWIITRHYQA 547 >gi|94676570|ref|YP_588605.1| putative inner membrane protein translocase component YidC [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219720|gb|ABF13879.1| inner membrane protein oxaA [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 533 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 142/576 (24%), Positives = 252/576 (43%), Gaps = 54/576 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + W+ + + E ++ + + Sbjct: 1 MDSQRNLLV-IALLFVSYIIWEIW----QKEHFPQNNIQNTLIEIKDNLPQQNIPY---- 51 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K + +IN G + L Y + S+ P L Y Sbjct: 52 ----YKKGKHIIVKTDVFLLTINTSGGDIEQAYLLTYPTKLGSSKPFSLL--EKKPTFVY 105 Query: 121 FAELDYVS--TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH- 177 A+ + + E P + L + + N I++ +T Sbjct: 106 LAQSGIIGKHGIDQKERPLYKAKHKQYFLNNNENILYVPLTYTSTNGIVYTKTFVFKRGE 165 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 + + + NNS + G+ + N+F +Q A + Sbjct: 166 FAINVNYNIQNNSNKPLEIKLFGQFKQSFNSSEFSDIYRNSFSLQTYRGAAYSTTKYKYK 225 Query: 233 K--YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 K + DI+++++ N W+ + +Y+ + ++P T + F + + F Sbjct: 226 KYSFKDIQQTNL-NVSSKKGWIAMLQQYFVTAWVPI--TQGYKNFYTTNLENGEVAIGFQ 282 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + E+ I P K L+ G K + + P ++ +D+G +FI+KP+F L+ Sbjct: 283 SEEVNIAPHKQDNLNAILWLGPKIQDKMAEID-----PYLDLAVDYGLLWFISKPLFKLL 337 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + Y+++GN+G AI++ T V+ L +PL K QY S A M +QPK+ +RE+F +P Q Sbjct: 338 KFIYSIIGNWGFAIIIITFIVRGLMYPLTKAQYTSIAKMMILQPKLAVIRERFSDNP-QR 396 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + ++ LYK INPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI+DL+A DP Sbjct: 397 QNQELMALYKAEKINPLGGCLPLIIQMPIFLALYYMLSGSIELRHAPFALWIQDLSAQDP 456 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PIIM ++M I K+SP D Q I+N+MP++F Sbjct: 457 YYIL-------------------PIIMGITMLIIQKISPTTITDPIQQKIMNFMPIIFTV 497 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 FP+GL++Y+ SN+ +I+QQ +I + ++ Sbjct: 498 FFLWFPSGLVLYYIVSNLFTIIQQELIYREFKKQVK 533 >gi|208780038|ref|ZP_03247381.1| 60Kd inner membrane protein [Francisella novicida FTG] gi|208744042|gb|EDZ90343.1| 60Kd inner membrane protein [Francisella novicida FTG] Length = 530 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 145/560 (25%), Positives = 256/560 (45%), Gaps = 55/560 (9%) Query: 21 WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM-------SPRVEL 73 W+ + ++ + +N + N+ + A + + + Sbjct: 4 WEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAKETNFSKYDNAKSITI 63 Query: 74 KNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANN 132 ++L +L+ Y + + +P+ L S ++ Y A+ V Sbjct: 64 NTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE--YIAKSTIVVNKQP 121 Query: 133 IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSI 191 I + + +GK + + L +A+ + RT + D+ Y + + N + Sbjct: 122 ISVNFEDQGIKTENGKQI-----LTLT-GSADGLQITRTYTFDDTKYNISVSQNIKNTTS 175 Query: 192 DQIRFSPRGRIMRHKPQTATNTF------GVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 + R + G S ++ + DI K++ Sbjct: 176 APVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRKESFKDISKTNGQPT 235 Query: 246 ---HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 + W+ Y+ S +IP S +++ Y + ++A TI P +S Sbjct: 236 VINSDGQGWVAFLQHYFVSAWIP---QSTNAKIYYKNLNGDVFEAGAFTGA-TIAPNQSE 291 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 ++ L+ G I DLA P E +D+G F ++ +F +M++ ++LVGN+G+ Sbjct: 292 NISSILYTGP----IIKANLVDLA-PNLEKTLDYGMLSFFSEIIFWVMNHIHSLVGNWGL 346 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Q L K M++LYK Sbjct: 347 AIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKDD-RQALGKKMMELYKEE 405 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ DP + Sbjct: 406 KVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMKDPYFVL-------- 457 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P++M LSMF+Q K+SP PAD QA ++ ++PV+F F +SFP+GL++YW Sbjct: 458 -----------PVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFTFLFASFPSGLVLYW 506 Query: 543 SWSNVISIVQQAVIMKMHGA 562 +N+ISI QQ +I + + A Sbjct: 507 LTNNLISISQQWIITRHYQA 526 >gi|213622860|ref|ZP_03375643.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 470 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 116/492 (23%), Positives = 213/492 (43%), Gaps = 37/492 (7%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTMQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + +V N + S G++ + T ++ F + G Sbjct: 167 FKRGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLF 477 +A DP I + Sbjct: 459 SAQDPYYILPIL 470 >gi|325922758|ref|ZP_08184492.1| protein translocase subunit yidC [Xanthomonas gardneri ATCC 19865] gi|325546754|gb|EGD17874.1| protein translocase subunit yidC [Xanthomonas gardneri ATCC 19865] Length = 573 Score = 395 bits (1014), Expect = e-107, Method: Composition-based stats. Identities = 134/608 (22%), Positives = 247/608 (40%), Gaps = 82/608 (13%) Query: 1 MERNWNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M + + + L V ++ W + N T P D AA Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKD------KTAANAPAVATTQSVPAARDLDAAATPA 54 Query: 59 D-DRAQALSMSPR----------------------VELKNPSLIGSINLKGAQFDDLNLR 95 + AQA+ + V L + L ++ G D L Sbjct: 55 NVPAAQAIPQAGVPGTVSATSTTAAPPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELL 112 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDY------VSTANNIELPNSNTVWNLISGKI 149 + +P+ L + + Y A + V + L G+ Sbjct: 113 QFPQTKDGTAPVSLLT--EDAAHPYNATSGWASEHSPVPGVGGFRAEQPGAAFELARGQ- 169 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR---- 204 + + V+ N + RT +L+ Y I D V N S ++ R Sbjct: 170 --NSLVVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTI 227 Query: 205 -HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVF 263 + T ++F G + + + D N + W+ + ++ + + Sbjct: 228 LSRGMTNPDSFS-FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAW 286 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 IP K+ + L+ R A+ T+ PG++ +T L+ G K I Sbjct: 287 IPQKDQ---ASLYVLNQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVSLIAK--- 340 Query: 324 DLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 + + ++D+ F I + +F ++S+ ++ + N+G AI+ V ++L +PL+ Sbjct: 341 -EDVKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSA 399 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 QY S A M+ QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+F Sbjct: 400 AQYKSGAKMRRFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIF 458 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 FA+Y V+ S+E+R AP+ GWI+DL A DP I P++ Sbjct: 459 FALYWVLVESVELRQAPWLGWIQDLTARDPYFIL-------------------PVLNIAI 499 Query: 501 MFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 M+ K++P P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ Sbjct: 500 MWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQ 559 Query: 560 HGAEIGLI 567 HG + I Sbjct: 560 HGEKPSKI 567 >gi|71891805|ref|YP_277534.1| hypothetical protein BPEN_012 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795911|gb|AAZ40662.1| putative protein [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 638 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 150/576 (26%), Positives = 264/576 (45%), Gaps = 58/576 (10%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N+FV L S I+ WQ Y ++R NIQ + + Sbjct: 89 MDSQRNFFVIAFLIMSFILWQIWQTEY---------HQRTNIQKINIHENTYPLIRSEDN 139 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D + + +K L+ IN G ++ L Y ++ S P L ++ Sbjct: 140 DAIKYVHHTNHVITVKTDVLLLKINTYGGDIEEAYLVNYLENLHSKEPFHLL--STSQAF 197 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL------TPTTPIKLVFKNANNILFERTI 172 Y ++ N ++ + K L + L ++ I + + Sbjct: 198 TYQTNSGLITENIPGRSYNKKFIYTTATDKSLYIIPKNENKLQLTLTHYASDGITYTKNY 257 Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-------HKPQTATNTFGVQEGFIAVL 224 + Y + TV N S ++ G I++ H + F + + Sbjct: 258 IFHRNDYSIYVFYTVNNMSTYPLKIKLFGNIVQSEHYPKSHNNSDNGDNFPLYSYRGSAY 317 Query: 225 GD--KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 K + + DI+ ++ + S W+ +S KY+A+ +IP + + Y ++ Sbjct: 318 STDKKKYQKYSFKDIKNMNLK-INTSKGWIAMSQKYFATAWIPLTQGNNTFYTTYHNNNS 376 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 A F +N I + G++ T + L+ G K + P ++L+D+GW +FI Sbjct: 377 A--SIGFQSNSIDLPIGETGTFQSILWIGPKIQEKMKAI-----APNLDLLVDYGWLWFI 429 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 ++P+F L+S+ Y+ + N+GI+I++ T+ ++L+ +PL K QY S A ++ +QPK+ ++E+ Sbjct: 430 SQPLFKLLSFIYSYIENWGISIIIITLIIRLIMYPLTKAQYTSMAKIRMLQPKLSIIQEE 489 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +K Q QK I+LYK +NPL GC P+L+Q+P+F A+Y ++S S+E+RHA F WI Sbjct: 490 YKHDKYQYHQK-TIELYKLEKVNPLGGCLPLLIQMPIFLALYYMLSGSVELRHAAFAFWI 548 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521 DL+A DP I PI+M ++MF KMSP D Q ++ Sbjct: 549 HDLSAQDPYYIL-------------------PILMGITMFFIQKMSPTTITDAIQKKMMT 589 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M ++F FP+GL++Y+ SN+I+I+QQ +I Sbjct: 590 IMLIIFTIFFLWFPSGLVLYYIASNIITIIQQYMIY 625 >gi|297570495|ref|YP_003691839.1| membrane protein insertase, YidC/Oxa1 family [Desulfurivibrio alkaliphilus AHT2] gi|296926410|gb|ADH87220.1| membrane protein insertase, YidC/Oxa1 family [Desulfurivibrio alkaliphilus AHT2] Length = 560 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 163/581 (28%), Positives = 269/581 (46%), Gaps = 41/581 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRI---------EEMNNERKNIQTVKQPNQ--- 48 M+ N+ +AI LS+ ++ +Q ++ P E + ER P Sbjct: 1 MD-NYRALIAIVLSMAVLLIYQFLFMPPPAPVTDAPGEAERVAAERSPAAEALSPADLAD 59 Query: 49 ---VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 V+ + V + + + +K I+ G L + V S Sbjct: 60 PALVEEAQRPVDVASLLDPADRAREIRVKTGLYTAVISEAGGVLQSFTLNEFRETVDPGS 119 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 P L+ + + + E L + L+ G+ + L ++ Sbjct: 120 PPKDLIR-VEPDDGLPLLFSWGVEPSRAEMLHYTADRERLVVGQ--GQERTLTLRAQSPL 176 Query: 165 NILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA- 222 + F RT + D YL + V N ++ +P ++ ++P AT F Sbjct: 177 GLEFIRTYTFRDGDYLIDVAVEVVNRGEVPLQGAPYLTLV-NRPFVATGDPLEHFLFTGP 235 Query: 223 -VLGDKSLVEQKYSDIE-KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 L D + + K D+ + + +F W G D Y+ + IP + F D Sbjct: 236 AALVDNEVQQVKVKDLAGERAGRSFTGRVRWAGYHDSYFLTSIIPLATDQATAHFSSRRD 295 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 ++ I G + ++ G K+ ++ DLA +++GWF Sbjct: 296 E--LVTTVLASAADIIPAGGAHRYDYMVYFGPKKLTLLNELGHDLA-----RAVNFGWFD 348 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+A+P F L+ + Y LVGN+G+AI+L T+ +K F+PL +K S M+ IQPK+ +LR Sbjct: 349 FLARPTFYLLHFLYGLVGNYGVAIILVTIIIKAAFWPLTQKGLKSMKVMQKIQPKMTKLR 408 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K Q Q+ M++LY+T+ +NPL GC P+LLQIPVFFA+YKV+ S+E+RHAPF Sbjct: 409 EKYKDD-RQRQQQEMLKLYQTYKVNPLGGCLPMLLQIPVFFALYKVLLQSIELRHAPFML 467 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+A D I F +P + + ++M+LSMF+Q KM+P +D QA I+ Sbjct: 468 WINDLSAPDRLYI-------GFDIPWLGGIPVLTLLMALSMFVQQKMTPI-SDPMQARIM 519 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++PVVF F +F +GL++YW +NV++I QQ +I + Sbjct: 520 LFLPVVFFFLFLNFASGLVLYWFINNVLTIAQQYMIYRQKD 560 >gi|66770623|ref|YP_245385.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. campestris str. 8004] gi|81303430|sp|Q4UNK8|OXAA_XANC8 RecName: Full=Inner membrane protein oxaA gi|66575955|gb|AAY51365.1| 60 kDa inner-membrane protein [Xanthomonas campestris pv. campestris str. 8004] Length = 573 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 130/602 (21%), Positives = 240/602 (39%), Gaps = 70/602 (11%) Query: 1 MERNWNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERK-----------------NIQ 41 M + + + L V ++ W + + Q Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKDKAPANAPTPIASQAVPAARDPDAAAPAANVPSAQ 60 Query: 42 TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 + Q A +P + L + L ++ G D L + Sbjct: 61 AIPQAGSPAAVPATSTTTATPATTGAAPAITLTSDVLRLKLD--GRSVLDAELLQFPQTK 118 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDY------VSTANNIELPNSNTVWNLISGKILTPTTP 155 P+ L + + Y A + V T + L G+ T Sbjct: 119 DGTEPVKLLT--EDAAHPYNATSGWASERSPVPGVGGFRAEQPGTTFELAKGQ---NTLV 173 Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQT 209 + V+ N + R +L Y I D V N S ++ R + T Sbjct: 174 VPFVWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNGYVFRKLSRVPTILSRGMT 233 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 ++F G + + + D N + W+ + ++ + +IP K+ Sbjct: 234 NPDSFS-FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ 292 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + L+ R A+ T+ PG+S +T L+ G K + + Sbjct: 293 ---ASLYVLAQDGPRDVAELRGPAFTVAPGQSASTEARLWVGPKLVSLLAK----EDVKG 345 Query: 330 FEMLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 + ++D+ F I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY S Sbjct: 346 LDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSG 405 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ QP++ +L+E++ Q Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V Sbjct: 406 AKMRRFQPRLAQLKERYGDD-RQKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWV 464 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + S+E+R AP+ GWI+DL A DP I P++ M+ K Sbjct: 465 LVESVELRQAPWLGWIQDLTARDPYFIL-------------------PVLNIAIMWATQK 505 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 ++P P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 506 LTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKPS 565 Query: 566 LI 567 I Sbjct: 566 KI 567 >gi|253702733|ref|YP_003023922.1| hypothetical protein GM21_4149 [Geobacter sp. M21] gi|259515695|sp|C6DYS1|OXAA_GEOSM RecName: Full=Inner membrane protein oxaA gi|251777583|gb|ACT20164.1| 60 kDa inner membrane insertion protein [Geobacter sp. M21] Length = 536 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 151/569 (26%), Positives = 256/569 (44%), Gaps = 47/569 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM---NNERKNIQTVKQPNQVDNSYAAVL 57 ME +A+ LS+ ++YA+ + P+ + T P+ A Sbjct: 1 ME--KRLIIAVVLSIGVLYAYSFIFPTPKPVPTPGGKQAAMSSATAPAPSVAALPIAGTT 58 Query: 58 I-----DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 QA +++ V + + +G L+ Y + L++ Sbjct: 59 PVAAPAPQAGQAPAVAKDVTVDTDLYTAVFSTQGGGLKKFVLKKYKETAGPQGKDIVLVN 118 Query: 113 PSNT-KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + + A ++ + N S + G ++L + I F + Sbjct: 119 ETAANRYALLSDSREFGISPNALYSASTGEVKVTDG----GKGSLELTTTTSQGITFRKV 174 Query: 172 ISLD-EHYLFKIVDTVTNNSIDQIRFSPRG-RIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 + + Y + + V N + + + R + V + L + + Sbjct: 175 YTFSGDAYRIGLTEEVQNVGNVALTGAVHLLQTSRVVDAKKEGRYEVYS--PSTLAEGKV 232 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 D++K+ + + +W +DKY+ I K + SQ + + Sbjct: 233 KLDDLEDLQKTPVQYGKD-IAWSAFADKYFVDGIIADKGSI--SQVRITRPANDAILRDV 289 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 ++ +++ PG+ ++ G K+ + L RFE +ID+GWF IAKP+ Sbjct: 290 ASPTVSVAPGQRSAINYAIYYGPKDLDILK-----LQGSRFEEVIDYGWFGPIAKPLIYS 344 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + Y GN+GIAI++ T +KL+FFPL K Y S +M+ +QPK+ EL+EKFK Sbjct: 345 LKFLYKYTGNYGIAIIIITFILKLVFFPLTHKSYKSMKDMQKLQPKMTELKEKFKNDRD- 403 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +A+++LYKTH +NPL GC P+L+QIPVFF +Y+ + S+E+RHAPF+ WI DL+A D Sbjct: 404 AMNRAVMELYKTHKVNPLGGCLPMLVQIPVFFGLYRALMYSIELRHAPFYLWITDLSAKD 463 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P + PIIM +MFIQ KM+P D QA ++ +P+VF F Sbjct: 464 PYYVT-------------------PIIMGATMFIQQKMTPTNMDPVQAKMMLMLPIVFTF 504 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +FP+GL+IYW +NV++I QQ I K Sbjct: 505 MFLNFPSGLVIYWLVNNVLTIAQQMYINK 533 >gi|21233657|ref|NP_639574.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|38503060|sp|Q8P338|OXAA_XANCP RecName: Full=Inner membrane protein oxaA gi|21115530|gb|AAM43456.1| 60kDa inner-membrane protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 573 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 130/602 (21%), Positives = 240/602 (39%), Gaps = 70/602 (11%) Query: 1 MERNWNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERK-----------------NIQ 41 M + + + L V ++ W + + Q Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKDKAAANAPTPIASQAVPAARDPDAAAPAANVPSAQ 60 Query: 42 TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 + Q A +P + L + L ++ G D L + Sbjct: 61 AIPQAGSPAAVPATSTTTATPATTGAAPAITLTSDVLRLKLD--GRSVLDAELLQFPQTK 118 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDY------VSTANNIELPNSNTVWNLISGKILTPTTP 155 P+ L + + Y A + V T + L G+ T Sbjct: 119 DGTEPVKLLT--EDAAHPYNATSGWASERSPVPGVGGFRAEQPGTTFELAKGQ---NTLV 173 Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQT 209 + V+ N + R +L Y I D V N S ++ R + T Sbjct: 174 VPFVWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNGYVFRKLSRVPTILSRGMT 233 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 ++F G + + + D N + W+ + ++ + +IP K+ Sbjct: 234 NPDSFS-FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ 292 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + L+ R A+ T+ PG+S +T L+ G K + + Sbjct: 293 ---ASLYVLAQDGPRDVAELRGPAFTVAPGQSASTEARLWVGPKLVSLLAK----EDVKG 345 Query: 330 FEMLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 + ++D+ F I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY S Sbjct: 346 LDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSG 405 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ QP++ +L+E++ Q Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V Sbjct: 406 AKMRRFQPRLAQLKERYGDD-RQKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWV 464 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + S+E+R AP+ GWI+DL A DP I P++ M+ K Sbjct: 465 LVESVELRQAPWLGWIQDLTARDPYFIL-------------------PVLNIAIMWATQK 505 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 ++P P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 506 LTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKPS 565 Query: 566 LI 567 I Sbjct: 566 KI 567 >gi|21326646|gb|AAL30086.1| 60Kd inner-membrane protein [Xanthomonas campestris pv. campestris] Length = 573 Score = 392 bits (1006), Expect = e-106, Method: Composition-based stats. Identities = 130/602 (21%), Positives = 241/602 (40%), Gaps = 70/602 (11%) Query: 1 MERNWNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERK-----------------NIQ 41 M + + + L V ++ W + + Q Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKDKAAANAPTPIASQAVPAARDPDAAAPAANVPSAQ 60 Query: 42 TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 + Q A +P + L + L ++ G D L + Sbjct: 61 AIPQAGSPAAVPATSTTTATPATTGAAPAITLTSDVLRLKLD--GRSVLDAELLQFPQTK 118 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDY------VSTANNIELPNSNTVWNLISGKILTPTTP 155 P+ L + ++Y A + V T + L G+ T Sbjct: 119 DGTEPVKLLT--EDAAHSYNATSGWASERSPVPGVGGFRAEQPGTTFELAKGQ---NTLV 173 Query: 156 IKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQT 209 + V+ N + R +L Y I D V N S ++ R + T Sbjct: 174 VPFVWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNGYVFRKLSRVPTILSRGMT 233 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 ++F G + + + D N + W+ + ++ + +IP K+ Sbjct: 234 NPDSFS-FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ 292 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + L+ R A+ T+ PG+S +T L+ G K + + Sbjct: 293 ---ASLYVLAQDGPRDVAELRGPAFTVAPGQSASTEARLWVGPKLVSLLAK----EDVKG 345 Query: 330 FEMLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 + ++D+ F I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY S Sbjct: 346 LDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSG 405 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ QP++ +L+E++ Q Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V Sbjct: 406 AKMRRFQPRLAQLKERYGDD-RQKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWV 464 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + S+E+R AP+ GWI+DL A DP I P++ M+ K Sbjct: 465 LVESVELRQAPWLGWIQDLTARDPYFIL-------------------PVLNIAIMWATQK 505 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 ++P P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 506 LTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKPS 565 Query: 566 LI 567 I Sbjct: 566 KI 567 >gi|238783045|ref|ZP_04627072.1| Inner membrane protein oxaA [Yersinia bercovieri ATCC 43970] gi|238716046|gb|EEQ08031.1| Inner membrane protein oxaA [Yersinia bercovieri ATCC 43970] Length = 398 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 122/425 (28%), Positives = 210/425 (49%), Gaps = 38/425 (8%) Query: 158 LVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTAT 211 + F + +F +T L + Y + V N S + + G++ + T + Sbjct: 1 MTFTGKDGSVFTKTFVLKRNDYAIGVDYHVKNASDAPLELTLFGQLKQSINLPKHRDTGS 60 Query: 212 NTFGVQEGFIAVLG--DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 N F + A D + +SDIE S+ + W+ + +Y+A+ +IP+ Sbjct: 61 NNFALHTYRGAAYSSDDTKYKKYSFSDIEDKSL-DITTKGGWVAMLQQYFATAWIPAANE 119 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + F G+ F + I PG+ L+ G + + P Sbjct: 120 --TNTFYSADLGNGLAAIGFKGMPVVIQPGEQKQLGATLWVGPEIQDKMAAI-----APH 172 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 ++ +D+GW +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M Sbjct: 173 LDLTVDYGWLWFISQPLFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKM 232 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ +RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ Sbjct: 233 RLLQPKLAAMRERIGDDK-QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMS 291 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+E+RHAPF WI DL+A DP I PI+M ++M+ KMSP Sbjct: 292 SVELRHAPFILWIHDLSAQDPYYIL-------------------PILMGITMYFIQKMSP 332 Query: 510 PP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 D Q I+ +MPV+F FPAGL++Y+ SN+++I+QQ +I + + GL Sbjct: 333 TTVTDPMQQKIMTFMPVIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR-GLEKRGLHS 391 Query: 569 RLRST 573 R + Sbjct: 392 RDKKK 396 >gi|222056914|ref|YP_002539276.1| YidC translocase/secretase [Geobacter sp. FRC-32] gi|254772789|sp|B9M7R9|OXAA_GEOSF RecName: Full=Inner membrane protein oxaA gi|221566203|gb|ACM22175.1| YidC translocase/secretase [Geobacter sp. FRC-32] Length = 530 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 155/560 (27%), Positives = 261/560 (46%), Gaps = 36/560 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME +A+ LS++++YA+ + P + QP+ S + Sbjct: 1 ME--KRVVIAVILSIVVLYAFSYMFPPPVANQKEKAGPVAAVQSQPSSAKLSAIDSVPAA 58 Query: 61 RAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 ++ R + + I + KG L+ Y + + L + S+ Sbjct: 59 ATPQAGLAARNIVVDTDLFIAVFSTKGGGLQSFQLKHYKDKAGAVGRDIVLKNESDGDKL 118 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-Y 178 + S+ ++G T + I+ + ++ ++ S + Y Sbjct: 119 SLLSEGKSFGLEPSLVFQSSAKDTKLAG---TEKSSIEFTVTSQTGVILKKVYSFSGNGY 175 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 + + N ++ + I ++ T + + ++ K SDI Sbjct: 176 GINLHQELINTGSSRVEGAI-SLINYNRLVAETGDGRYEVYGPVTMAGDKVITDKVSDIA 234 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 K F + SW +DKY+ I K + ++ +SD + Q +++ +++ P Sbjct: 235 KGP-KQFDNNVSWSAFADKYFMDAVIAVKNSIASARVAKISDNY--VQTNVTSSPLSLNP 291 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G+S + LF G K+ + R E ID+GWF +AKP+ + +FY+ Sbjct: 292 GQSASMDYRLFYGPKDLDILKAQGS-----RLEEAIDFGWFSALAKPLLRSIKFFYSYTH 346 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI++ T+ +K+LFFPL K Y S M+ +QPK+ EL+EKFK + +A++ L Sbjct: 347 NYGLAIIIITIILKVLFFPLTHKSYKSMKEMQKLQPKMVELKEKFKNDRD-AMNRAVMDL 405 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YKTH +NP+ GC P+L+QIPVFFA+YK + S+E+RHAPF WI DL+A DP + Sbjct: 406 YKTHKVNPMGGCLPMLVQIPVFFALYKALMFSIELRHAPFVLWITDLSAKDPYYVT---- 461 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 PIIM ++MFIQ KM+P D QA ++ +PVVF F +FPAGL Sbjct: 462 ---------------PIIMGVTMFIQQKMTPTNMDPIQAKMMLALPVVFTFMFLNFPAGL 506 Query: 539 IIYWSWSNVISIVQQAVIMK 558 ++YW +N+++I QQA I K Sbjct: 507 VLYWLINNILTIAQQAYINK 526 >gi|325915704|ref|ZP_08178009.1| protein translocase subunit yidC [Xanthomonas vesicatoria ATCC 35937] gi|325538121|gb|EGD09812.1| protein translocase subunit yidC [Xanthomonas vesicatoria ATCC 35937] Length = 574 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 132/608 (21%), Positives = 248/608 (40%), Gaps = 81/608 (13%) Query: 1 MERNWNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M + + + L V ++ W + Q+V D S A + Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKD----KAAANAPAVVATQSVPAARDPDASAPAANV 56 Query: 59 DDRAQALSMSPR-----------------------VELKNPSLIGSINLKGAQFDDLNLR 95 AQA+ + + L + L ++ G D L Sbjct: 57 P-AAQAIPQAGVPGAAPAATSTTTATPAAAGAAPVITLTSDVLRLKLD--GRSVLDAELL 113 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDY------VSTANNIELPNSNTVWNLISGKI 149 + +P+ L + + Y A + V + + L G+ Sbjct: 114 QFPQTKDGTAPVSLLT--EDAVHPYNATSGWASEHSPVPGVGGFRAEQPGSTFELAKGQ- 170 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR---- 204 T + V+ N + RT +L+ Y I D V N S ++ R Sbjct: 171 --NTLVVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTI 228 Query: 205 -HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVF 263 + T ++F G + + + D N + W+ + ++ + + Sbjct: 229 LSRGMTNPDSFS-FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAW 287 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 IP K+ + L+ R A+ T+ PG++ +T L+ G K I Sbjct: 288 IPQKDQ---ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVSLIAK--- 341 Query: 324 DLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 + + ++D+ F I + +F ++S+ ++ + N+G +I+ V ++L +PL+ Sbjct: 342 -EDVKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWSIIGLVVLLRLALYPLSA 400 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 QY S A M+ QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+F Sbjct: 401 AQYKSGAKMRRFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIF 459 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 FA+Y V+ S+E+R AP+ GWI+DL A DP I P++ Sbjct: 460 FALYWVLVESVELRQAPWLGWIQDLTARDPYFIL-------------------PVLNIAI 500 Query: 501 MFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 M+ K++P P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ Sbjct: 501 MWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQ 560 Query: 560 HGAEIGLI 567 HG + I Sbjct: 561 HGEKPSKI 568 >gi|95929982|ref|ZP_01312722.1| 60 kDa inner membrane insertion protein [Desulfuromonas acetoxidans DSM 684] gi|95133951|gb|EAT15610.1| 60 kDa inner membrane insertion protein [Desulfuromonas acetoxidans DSM 684] Length = 527 Score = 388 bits (996), Expect = e-105, Method: Composition-based stats. Identities = 155/562 (27%), Positives = 267/562 (47%), Gaps = 43/562 (7%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVY---PRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 N N VA+ L +I+ + + + + +++KQ VD + + Sbjct: 2 ENKNTLVALILMLIVWTGFTFLFPPSENQSPDSEVTAKAEDKSLKQDISVDAQTVVDIQN 61 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + + + +N +I++ + DL L+ Y D+ ++S +V+LL S+ + Sbjct: 62 NISNVKTSDRFITFENDVFEATISVSTSTLVDLKLKDYKRDIDNDSDLVSLLDKSDDIKS 121 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILT--PTTPIKLVFKNANNILFERTISLDEH 177 Y + +L N+ + + + + N + +R I Sbjct: 122 LV----YYGNNDFSQLSNALFNTKITDDHVFVSQDSLQVDFYSTVDNFEINKRYIFYKNK 177 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y F IV ++ N S D + + + G + D L DI Sbjct: 178 YDFDIVYSLKNISSDSRNGNVVLSLSNFWSEDIKGNRLEFVGPV-YFSDDELNTIDVEDI 236 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 SN W G +KY+ S I + + S + + Q + ++TI Sbjct: 237 NNDVYSNIA----WSGFENKYFFSALIGNDKFSNL----LVKHQNNYVQTNLISTDLTIS 288 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G+ + +F G K+ + + +L ++D+G+F +AKP+ ++++FY + Sbjct: 289 NGQQLDFKTKVFYGPKDVQILKGVDDNLV-----RVVDYGFFKILAKPLHTVLNFFYGYI 343 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G +I+L TV +K+LF+PL +K YVS M+ IQP++ +LREK+ + L + M++ Sbjct: 344 GNYGFSIILLTVIIKMLFWPLTQKSYVSMKAMQKIQPEMKKLREKYGND-RESLNRKMME 402 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LY+ H +NPL GC P+L+QIPVFFA+YKV+ ++E+RHAPF WI DL+ DP I Sbjct: 403 LYREHRVNPLGGCLPMLVQIPVFFALYKVLLGTIELRHAPFIFWITDLSVKDPYYIT--- 459 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 P++M L+MFIQ K++P D QA ++ MPVVF F +FPAG Sbjct: 460 ----------------PLVMGLTMFIQQKLTPNTMDPMQAKMMLAMPVVFTFLFLNFPAG 503 Query: 538 LIIYWSWSNVISIVQQAVIMKM 559 L++YW +N+++I QQ +I K Sbjct: 504 LVVYWLVNNLLTIFQQYLIYKK 525 >gi|46579490|ref|YP_010298.1| inner membrane protein, 60 kDa [Desulfovibrio vulgaris str. Hildenborough] gi|120602960|ref|YP_967360.1| 60 kDa inner membrane insertion protein [Desulfovibrio vulgaris DP4] gi|81699125|sp|Q72D53|OXAA_DESVH RecName: Full=Inner membrane protein oxaA gi|259515685|sp|A1VER7|OXAA_DESVV RecName: Full=Inner membrane protein oxaA gi|46448904|gb|AAS95557.1| inner membrane protein, 60 kDa [Desulfovibrio vulgaris str. Hildenborough] gi|120563189|gb|ABM28933.1| protein translocase subunit yidC [Desulfovibrio vulgaris DP4] gi|311233305|gb|ADP86159.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio vulgaris RCH1] Length = 534 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 151/565 (26%), Positives = 247/565 (43%), Gaps = 41/565 (7%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVY---PRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 N +A+ LS I++ W Y E+K + P+ V ++ AV Sbjct: 2 ENKRAIIAVVLSFIVLVGWGYLSEYMGWTPKSVPATEQKTAASAPAPSVVTSAPEAV-TP 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A + S V + P ++ G L YH+ + ++ V L+ S + Sbjct: 61 APAFSPSTGHEVTVTTPLYKAVLHSGGGVLRQFMLSRYHMGIDRDAAPVNLIESSAIR-- 118 Query: 120 YFAELDYVSTANNIELPNSNT-VWNLISGKI-LTPTTPIKLVFKNA-NNILFERTISLD- 175 A L + P+ NT W G + L L F + + + R + Sbjct: 119 -VAPLGLLVNGQ----PSWNTGQWAFEGGDLNLADGQTGTLRFVGSVDGLRVVRELEFHA 173 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY- 234 + YL + + + + + +A D S E+ Sbjct: 174 DSYLVTEKLHLAPEGDAPRTARVGFTLGTTSLTPGESQYNLTR--VAWFADGSFSEKSST 231 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D+EK + S W G+ Y+ + P Y+ + Sbjct: 232 GDLEKGVL--IDGSIDWAGVMSNYFLAAVAPKD----TRAVLKGKLEGGVYRVAVERPDQ 285 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 + PG S + G KE ++ +L ID GWF FIA+P+ L+ +FY Sbjct: 286 MVNPGNSDVIVCNYWFGPKERDLLNAAPNNLG-----KAIDLGWFGFIARPLVTLLDFFY 340 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 VGN+G AI+L T+ +KL+F+PL+ K Y S MK +QP + ++REK + + + Sbjct: 341 KYVGNYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQPMLAKVREKHADD-REKMNEE 399 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYKT+ +NP GC P+L+QIPVFF +Y+ + ++E+RHAPF + D + Sbjct: 400 MMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHAPFIAHVP---FTDIVWLA 456 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 L PFY+ P++M +MF+Q K++PP D QA ++ +MPVVF F +F Sbjct: 457 DLSAKDPFYVT--------PLVMGATMFLQQKLTPPAGDPTQAKVMMFMPVVFTFLFLNF 508 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKM 559 P+GL++YW +NV+SI QQ I++ Sbjct: 509 PSGLVVYWLCNNVLSIAQQWWILRK 533 >gi|148245070|ref|YP_001219764.1| hypothetical protein COSY_0941 [Candidatus Vesicomyosocius okutanii HA] gi|166977423|sp|A5CVI2|OXAA_VESOH RecName: Full=Inner membrane protein oxaA gi|146326897|dbj|BAF62040.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 541 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 144/574 (25%), Positives = 270/574 (47%), Gaps = 54/574 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID--- 59 N +F+ IA+ + I W + + I++ NN + +K + ++NS +D Sbjct: 2 NNQKFFLIIAIFLSIFLLWDKWEITHTIDKNNNLISQTK-IKNTSTINNSLTNQNLDIPS 60 Query: 60 ----------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + P +K L I+ KG + L Y +++ S Sbjct: 61 VTNRNNKLDLPNTDTKNQIPFTTVKTDLLTLEISHKGGTIQNAWLNDYPIEIDSEQKFQL 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLIS--GKILTPTTPIKLVFKNANNIL 167 L T + A+ + ++P +++++ + ++ + +K+ N I+ Sbjct: 121 L--SDRTGKIFQAQSGLLPQG---KMPTHHSIFSSKNIYYQMDGNNLVVPFTWKSENGII 175 Query: 168 FERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 + +++ Y+ I +TN + + + + +++R+ P G Sbjct: 176 VNKRYHFNKNSYVVGIDYQITNTTNNTLHITSYTQLIRNIPDQDNMIMPTYTGGARFNDQ 235 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + ++ D + +++ W+ + + Y+ IP+ K ++D +Y Sbjct: 236 DVYEKIEFEDFDDQPKTSYK--GGWMAMIEHYFFVAVIPNLNQIHTYSSKIIND---KYL 290 Query: 287 AKFSANEITILPGKSITT-TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 E++I PG + T + L+ G KE I + P + +D+G + IAKP Sbjct: 291 LTVVNPELSIAPGATKTIINSNLYIGPKEQSHIDNV-----APGLDKTVDYGILFIIAKP 345 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + L+++ Y+++ ++G +I++ T+ +KL F+ L++K Y S A M+ + P++ +L+E + Sbjct: 346 LSELLNWIYSIIHSWGYSIIILTLLIKLAFYKLSEKSYRSMAGMRQLAPRLKKLKETYGD 405 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + Q L K ++LYK INP +GC PIL+QIPVF ++Y V+ +E+R APFW ++ DL Sbjct: 406 NK-QKLGKKTMELYKKEKINPASGCLPILVQIPVFISLYWVLLEMVELRQAPFW-YLTDL 463 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 +A DP I P+IM +SMFIQ K++PPP D QA I+ +P Sbjct: 464 SAPDPYYIL-------------------PLIMGISMFIQQKLNPPPPDPIQAKIMMALPF 504 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 VF FP+GL++YW +N++SI QQ VI K Sbjct: 505 VFTIFFLWFPSGLVLYWMINNILSITQQWVINKR 538 >gi|118603000|ref|YP_904215.1| protein translocase subunit yidC [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166977411|sp|A1AXT7|OXAA_RUTMC RecName: Full=Inner membrane protein oxaA gi|118567939|gb|ABL02744.1| protein translocase subunit yidC [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 541 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 140/576 (24%), Positives = 261/576 (45%), Gaps = 55/576 (9%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEM-----NNERKNIQTVKQPNQVDNSYA 54 M N+ VAI LS + W + V + + K+ T+ N A Sbjct: 1 MNNQKNFLIVAIFLS--VFLLWDKWGVTHVVGANGNLISQTKIKDASTINNSLTNKNLNA 58 Query: 55 AVLIDDRAQ-------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + +I A+ + +P + L I+ KG + L Y ++++S Sbjct: 59 SSIIHRNAELDLPNTITKNQAPFTTVVTDLLTLEISHKGGTIQNAWLNDYPIEINSEQKF 118 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVFKNANN 165 L + ++ + A+ + + P +++++ + ++ + + +K+ N Sbjct: 119 QLLSNKAD--EIFQAQSGLLPQG---QTPTHHSIFSSKNSHYQMDGNSLVVPFTWKSENG 173 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 I + +++ Y+ I +TN + + + + +++R+ + G Sbjct: 174 IKVIKRYHFNKNSYVIGIDYQITNTTNNTLNITSYTQLVRNALDQSNMIIPTYTGGARFD 233 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 + ++ D W+ + + Y+ IP K + + Sbjct: 234 DQDVYEKIEFEDFNDQP--KTTSKGGWIAMIEHYFFVAAIPDVNQIHTYSSKII---NGE 288 Query: 285 YQAKFSANEITILPGKSITT-TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y E+ I PG +T ++ L+ G KE I++ P + +D+G + IA Sbjct: 289 YLLTVVNPELVIAPGAIVTLPSSSLYIGPKEQKQINNV-----APGLDKTVDYGVLFIIA 343 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+ L+++ Y+++ ++G +I+ T+ +KL F+ L++K Y S A M+ + P++ +L+E + Sbjct: 344 KPLSELLNWIYSIIHSWGYSIITLTLLIKLAFYKLSEKSYRSMAGMRQLAPRLTKLKETY 403 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q L + ++LYK INP +GC PIL+QIPVF ++Y V+ +E+R APFW ++ Sbjct: 404 GDDK-QKLGQKTMELYKKEKINPASGCLPILVQIPVFISLYWVLLEMVELRQAPFW-YLT 461 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+A DP I P+IM +SMF Q K++PPP D QA I+ + Sbjct: 462 DLSAQDPYYIL-------------------PLIMGVSMFAQQKLNPPPPDPMQAKIMMAL 502 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 P VF FP+GL++YW +N++SI QQ VI K Sbjct: 503 PFVFTIFFLWFPSGLVLYWVVNNILSITQQWVINKR 538 >gi|317154269|ref|YP_004122317.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio aespoeensis Aspo-2] gi|316944520|gb|ADU63571.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio aespoeensis Aspo-2] Length = 554 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 154/571 (26%), Positives = 249/571 (43%), Gaps = 40/571 (7%) Query: 1 ME--RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV------KQPNQVDNS 52 ME +A+ALS I+++ WQ E+ RK ++ + Sbjct: 1 MEKKEQIRLVIALALSFIVIFGWQYLMAPSAEEQAEVARKAVEAERRAVALSSQSDAAGV 60 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A + + V + P N +G + L+ Y + +SP V L+ Sbjct: 61 TQAHGVPAGDFIATAGVAVTVDTPLYTAVFNSQGGILEKFILKNYRETIKPDSPNVDLIG 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT---PTTPIKLVFKNANN-ILF 168 + L + TA + E +G L L F + Sbjct: 121 ANAFAKG---PLGLILTAGDKEFHTWQRGEWAFAGSNLALGEGDGVKTLTFSGQSGDFRI 177 Query: 169 ERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 ERT++ D Y VT + + +++ + +A L Sbjct: 178 ERTLTFDPATYHITESAMVTTLGNTGVEGAVSFTAAAKSMSAEDDSYNPTK--VAYLSAD 235 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 E D K + W + Y+ IP+ E++ S + D R Sbjct: 236 GREEMSDRDDLKETGITSPSGLKWGAVESNYFLFAIIPASESATLSAG--VQDDIFRMAV 293 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 A T LP + T F G + + L E +D+GWF F+AKP+ Sbjct: 294 NEDA---TFLPNVTKTVKASYFLGPTDRDMLATMPNQL-----EKAVDFGWFDFLAKPLL 345 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 + +++FY+ V N+GIAI+L T+ +KL+F+PL+++ Y S MK +QP + +LREK+ Sbjct: 346 IGLNFFYDYVHNYGIAIILLTIVIKLIFWPLSQRSYASMEQMKKLQPMVQKLREKYGDDK 405 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q L + + LYKT+ +NP+ GC P+++QIPVFF +YK + ++E+RHAP +I ++ Sbjct: 406 -QRLNQETMALYKTYKVNPMGGCLPMVVQIPVFFGLYKALLGAVELRHAP---FIANVPF 461 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 D + L P+Y+ P+IM +MF+Q KM+P D Q I+ MPVVF Sbjct: 462 TDLPWLADLSAKDPYYVT--------PLIMGATMFLQQKMTPSAGDPTQQKIMMLMPVVF 513 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL+IYW +NV+SI QQ +I++ Sbjct: 514 TFMFLQFPSGLVIYWLLNNVLSIGQQLLIVR 544 >gi|21245084|ref|NP_644666.1| inner membrane protein translocase component YidC [Xanthomonas axonopodis pv. citri str. 306] gi|38503062|sp|Q8PEH7|OXAA_XANAC RecName: Full=Inner membrane protein oxaA gi|21110818|gb|AAM39202.1| 60 kDa inner-membrane protein [Xanthomonas axonopodis pv. citri str. 306] Length = 574 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 131/607 (21%), Positives = 249/607 (41%), Gaps = 79/607 (13%) Query: 1 MERNWNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M + + + L V ++ W + Q+V +D + + Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKD----KAAANAPVVAATQSVPAARDLDAATPSAAN 56 Query: 59 DDRAQALSMSP----------------------RVELKNPSLIGSINLKGAQFDDLNLRG 96 AQA+ + V L + L ++ G D L Sbjct: 57 VPAAQAIPQAGAPGAVPATSTTAATPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELLQ 114 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDY------VSTANNIELPNSNTVWNLISGKIL 150 + +P+ L + + Y A + V T +++ G+ Sbjct: 115 FPQTKDGTAPVSLLT--EDPAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFDMAKGQ-- 170 Query: 151 TPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR----- 204 T + V+ + + RT +L+ Y I D V N S ++ R Sbjct: 171 -NTLVVPFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTIL 229 Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 + T ++F G + + + D N + W+ + ++ + +I Sbjct: 230 SRGMTNPDSFS-FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWI 288 Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 P K+ + L+ R A+ T+ PG++ +T L+ G K I Sbjct: 289 PQKDQ---ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVSLIAK---- 341 Query: 325 LAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 + + ++D+ F I + +F ++S+ ++ + N+G AI+ V ++L +PL+ Sbjct: 342 EDVKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAA 401 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 QY S A M+ QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FF Sbjct: 402 QYKSGAKMRRFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFF 460 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A+Y V+ S+E+R AP+ GWI+DL A DP I P++ M Sbjct: 461 ALYWVLVESVELRQAPWLGWIQDLTARDPYFIL-------------------PLLNISIM 501 Query: 502 FIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + K++P P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ H Sbjct: 502 WATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQH 561 Query: 561 GAEIGLI 567 G + I Sbjct: 562 GEKPSKI 568 >gi|118582022|ref|YP_903272.1| 60 kDa inner membrane insertion protein [Pelobacter propionicus DSM 2379] gi|166975879|sp|A1AV44|OXAA_PELPD RecName: Full=Inner membrane protein oxaA gi|118504732|gb|ABL01215.1| protein translocase subunit yidC [Pelobacter propionicus DSM 2379] Length = 542 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 157/565 (27%), Positives = 260/565 (46%), Gaps = 32/565 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA----AV 56 ME +A+ LS+ + Y + + ++ Q V P A Sbjct: 1 ME--KRTLLAVILSITVFYVFSLLFA--PEKKPVQPESTGQAVSAPVSAGQPVAGGVQPS 56 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 A + V ++ +G L L+ Y ++ V L S ++ Sbjct: 57 ASAPSLPATAQQQDVTVRTGLYTAVFCSRGGALKSLTLKNYREKNLPDAQAVVLGSDADP 116 Query: 117 KNAYFA-ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 F+ + T + G+ + + + + Sbjct: 117 SALTFSTRASGFNLPEGAPFVADATAVTMAGGEK----KQLVFTHNSGQGFTVRKIYTFS 172 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 + Y K+ V NN + + + ++M + + + D SL K Sbjct: 173 GDSYGIKLDTQVFNNMAVPLVGTVQ-QVMTYPGLVKAKDSRFETAGSYLFSDNSLESDKL 231 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D+ S+ + ++ W G +DKY+ + + E + + +G ++ S+ I Sbjct: 232 KDVS-SASKLYDKNLQWSGFADKYFLTAIL--SEGGSIASVELRKNGAGFLESTVSSPRI 288 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 T+ PG+S+T + LF G K+ + L E +D GWF IAKP+ + YFY Sbjct: 289 TVTPGQSVTVVHRLFVGPKDIDILKAQGNSL-----EQSLDLGWFTVIAKPLLYTLKYFY 343 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 VGN+G+AI++ T+ +K LFFPL K Y S +M+ IQP + L+EK+K + + KA Sbjct: 344 RYVGNYGVAIIIITIILKALFFPLTHKSYKSMKDMQKIQPMMAALKEKYKDD-REGMNKA 402 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +++LY+ H +NPL GC P+L+QIPVFFA+YK + S+E+RHAPF+ WI DL+ D N+F Sbjct: 403 VMELYRDHKVNPLGGCLPMLVQIPVFFALYKALMFSIELRHAPFYFWITDLSGPD--NLF 460 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 LPF +G P++M +MFIQ KM+P D QA ++ +PVVF F +F Sbjct: 461 GQMLGLPF------VIGPLPLLMGATMFIQQKMTPSTMDPMQAKMMLALPVVFTFMFLNF 514 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKM 559 P+GL++YW +N+++I QQ I K+ Sbjct: 515 PSGLVLYWLLNNILTIGQQMYINKL 539 >gi|198282181|ref|YP_002218502.1| 60 kDa inner membrane insertion protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665291|ref|YP_002424546.1| inner membrane protein, 60 kDa [Acidithiobacillus ferrooxidans ATCC 23270] gi|198246702|gb|ACH82295.1| 60 kDa inner membrane insertion protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517504|gb|ACK78090.1| inner membrane protein, 60 kDa [Acidithiobacillus ferrooxidans ATCC 23270] Length = 528 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 159/561 (28%), Positives = 258/561 (45%), Gaps = 43/561 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ +A+AL+V++ +Q + P+ +++ V Sbjct: 1 MDNQK-TILAVALAVVVFLLFQAWQEQNAPKPAAGPAVSRSVTAPGATATSPAPVDVVPA 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + V + G I+L G +L LR Y V +P L Sbjct: 60 SAGGLPPATGAAVSFQTQVFTGRISLNGGDIQNLGLRHYPQAVDDTAPYPLL--DGAPAR 117 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EH 177 + +VS+ + +G+ T PI L K A + E+T + + Sbjct: 118 LTIQQSGFVSSDG----QTLTARFAAPAGQT-TAGQPIVLTGK-AGPLTVEKTWTFQPDS 171 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+ + T+TN+ S +I+R+ + G + ++ + E +SDI Sbjct: 172 YVAEEHVTITNSGSAPWNGSYFDQILRNDRTETHMFMSIFTGAV-LMHQGNFSEVSFSDI 230 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + W G+ D Y+ + +PS Y Y A S T+ Sbjct: 231 HDHPV--LKSGPGWAGMMDHYFLTAILPSAHAQVQV---YARPSGTNYVAGVSTPLPTLA 285 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PG+S T T LF G K T+ + L E +D+GWF IA+PM +++++F+ LV Sbjct: 286 PGQSTTITQQLFLGPKRQQTLAAMGRGL-----EQTVDYGWFAIIAEPMHVVLTWFHGLV 340 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G+AI+L + VK +FF + Y S ANM+ +QPK+++L+++ Q L AM++ Sbjct: 341 GNWGLAIILLVIVVKSIFFYPSAISYRSMANMRKLQPKLEKLKQEVGDD-RQKLGAAMME 399 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LY++ +NP+AGC PI+LQ+P F A+Y V+ S+ +R APF WI DLA DP I Sbjct: 400 LYRSEKVNPMAGCLPIILQMPFFIALYWVLVESVSLRQAPFILWIHDLAIPDPYFIL--- 456 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 P++M +SMF Q +++P P D Q I++ +PVVF S FPAG Sbjct: 457 ----------------PLLMGISMFFQQRLNPAPVDPMQKRIMSALPVVFAVFFSFFPAG 500 Query: 538 LIIYWSWSNVISIVQQAVIMK 558 L++YW +NV+SI QQ +I + Sbjct: 501 LVLYWLTNNVVSIGQQYLITR 521 >gi|118594210|ref|ZP_01551557.1| preprotein translocase subunit yidC [Methylophilales bacterium HTCC2181] gi|118439988|gb|EAV46615.1| preprotein translocase subunit yidC [Methylophilales bacterium HTCC2181] Length = 546 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 154/565 (27%), Positives = 265/565 (46%), Gaps = 32/565 (5%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + + S ++ W ++ E + I P+ + + Sbjct: 2 ETKRLILFVVFSFSLLLLWDSWQKEQTPIETVGVTEKISDSSIPSSSAQLTNNMPASNLG 61 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 L+ +P + + SI+ G L L + ++S + Y A Sbjct: 62 FQLAQTPYITVTTDLYNISISNVGGDIRSLELLKHK---DGEGAPYLMMSDNANPLLYVA 118 Query: 123 ELDYVSTANNIELPNSNTVWNL--ISGKILTPTTPIKLVFKNANNILFERTISLDEH-YL 179 + + +LP+ +++ S ++ + LVF+N+ + +T ++ Y+ Sbjct: 119 QTGLLGG----DLPSHKDIYSAMRASYQMNDNELVVPLVFENSA-VKVTKTYRFTKNSYV 173 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQ-TATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 ++ ++ N S++ I+ S + + + G + + D++ Sbjct: 174 IQVTYSLLNKSLNTIKSSVYLQFIHDGTTHQGSAMMPSFTGTAYFNNKDKFTKLAFDDVD 233 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 K S S+ W+GI +Y+A +I ETS K ++D Y + A I P Sbjct: 234 KKPFS-LVTSDGWIGIIQRYFAGAWILPSETSRELYSKKVADN--IYASGTLAFLGEIDP 290 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G + T+ LF G + + A +D+GW FIA P+F ++S V Sbjct: 291 GSTKLFTSELFVGPQSKDDLAA-----AAEGLSYAVDYGWLTFIASPLFSVLSGIQKAVI 345 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+L T+ +KLLF+PL+ Y S A M+ + P++ ++EKF Q +Q+AM++L Sbjct: 346 NWGVAIILLTILIKLLFYPLSAASYRSMAQMREVAPRLQSMKEKFGDDK-QKMQQAMMEL 404 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YKT INPL GC PIL+QIPVF A+Y V+ S+E+R AP + +I DL+ D +LFG Sbjct: 405 YKTEKINPLGGCLPILVQIPVFIALYWVLLGSVELRGAP-FLYISDLSVPD-----SLFG 458 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 L F + +G P++M+ SMF+QMK++P P D QA ++ MP++F FPAGL Sbjct: 459 TLWF-----VPLGPLPLLMAASMFLQMKLNPKPTDPMQARLMMMMPIIFSIFFFFFPAGL 513 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAE 563 ++YW +N++SI QQ + AE Sbjct: 514 VLYWLVNNILSIGQQWYVNNKIHAE 538 >gi|239906118|ref|YP_002952857.1| inner membrane protein OxaA [Desulfovibrio magneticus RS-1] gi|259515664|sp|C4XNJ6|OXAA_DESMR RecName: Full=Inner membrane protein oxaA gi|239795982|dbj|BAH74971.1| inner membrane protein OxaA [Desulfovibrio magneticus RS-1] Length = 532 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 147/560 (26%), Positives = 258/560 (46%), Gaps = 33/560 (5%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N +A+ALS+ ++ W + P + + Q + AA A Sbjct: 2 ENKRVILAVALSLAVLVGWNFLF-PPAKQAPKPDAAVSQQDAPAQSSPAAPAAKAETLAA 60 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 A + R+ + P +N G + L+ Y + +SP+V L+ A Sbjct: 61 FAPTPGKRITIDTPLYTAVLNSTGGVLEQFALKNYRETIKPDSPLVNLIDDKAKAKAPLG 120 Query: 123 E-LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLF 180 L+ T N++ L +G T + L + + ++ +R ++ + Y+ Sbjct: 121 IILNGSPTWQNVDWSAEGGDLKLEAGAAGT----VVLAGRMGD-VVVKRELTFSGDSYII 175 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 +++NN +R + + A +++ + A G L + D + + Sbjct: 176 DEKFSLSNNGGAPLRNRLSLTVAVDRLSAADDSYNPTQ--AAFYGASGLDLES-GDKKLA 232 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 + W + Y+ +P ++ + + + G Sbjct: 233 EGVAPEKPMEWGAVMSNYFLVGIVPEAADLR----GKAKLEDGVFRVALDKDGLEVPAGG 288 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + F G K + ++A + ID+GWF F+AKP+ L+ +FY+ VGN+ Sbjct: 289 RSDLSIAYFLGPKVPKYL-----EMAPHKLVASIDYGWFDFVAKPLIKLLHFFYDYVGNY 343 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI+L T+ +KL+F+PL++K Y S MK +QP + +LREK+K Q + + M+QLYK Sbjct: 344 GVAIILLTILIKLIFWPLSQKSYKSMDQMKKLQPLLTQLREKYKDD-RQKMNEEMMQLYK 402 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 T+ +NP GC P+++QIPVFF +Y+ + S+E+RHA +I L + + L Sbjct: 403 TYKVNPAGGCLPMIVQIPVFFGLYQALLHSIELRHAS---FITHLPFTNMIWLADLSAKD 459 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 PFY+ P+IM +MF+Q KM+P P D QA ++ +MPV+F F +FP+GL++ Sbjct: 460 PFYIT--------PLIMGATMFLQQKMTPAPGDPTQAKVMLFMPVIFTFMFLNFPSGLVV 511 Query: 541 YWSWSNVISIVQQ-AVIMKM 559 YW +NVISI QQ ++ K Sbjct: 512 YWLVNNVISIAQQGWMLNKK 531 >gi|78357437|ref|YP_388886.1| protein translocase subunit yidC [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552065|sp|Q30YQ5|OXAA_DESDG RecName: Full=Inner membrane protein oxaA gi|78219842|gb|ABB39191.1| protein translocase subunit yidC [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 536 Score = 385 bits (989), Expect = e-104, Method: Composition-based stats. Identities = 147/564 (26%), Positives = 256/564 (45%), Gaps = 37/564 (6%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVY----PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 N +A+ LS+ ++ W + P + +Q A Sbjct: 2 ENKRPIIAVVLSLFVLIGWSYLSEFMGWTPAPAPVEQNATAVQQKASEPVAQPVQTASAP 61 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + A + V++ P +G L+ Y + +P+V L++P Sbjct: 62 AASSFAPTEGREVKVDTPLYTAVFQSQGGVLKHFRLKKYTESIEEGAPLVELVTPEAAGK 121 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKI-LTPTTPIKLVFKNA-NNILFERTISLD- 175 A L N + W + L + +LVF + + FERT+S D Sbjct: 122 APMGLLL------NGQPTWKLAAWQFEGDDLKLDGSGKGELVFVGEMDGVRFERTLSFDP 175 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 E YL +T+ + + + + +A D E Sbjct: 176 ETYLISEKVRLTDTAGVSRDVRLGMTLSTTSLSPEGGAYNLTR--MAWYQDGFHQETSAD 233 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D+ ++ + E +W G+ Y+ +V P++ FK + +G Y++ + ++ Sbjct: 234 DLRETGVK-VDEGVNWGGVMCNYFMAVMAPAEGA---LPFKGVLEG-GVYRSVVENSSLS 288 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I G S + G KE + + +++GWF F+AKP+ + +FY+ Sbjct: 289 IASGSSAEFGIGYYIGPKESDRLAAMPY-----HLDEALNYGWFTFLAKPLVSGLKFFYS 343 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 GN+G+AI++ T+ VKLLF+PL++K Y S MK +QP + +++EK+ Q + + + Sbjct: 344 YAGNYGVAIIILTILVKLLFWPLSQKSYKSMEQMKKLQPMVQKIKEKYGDD-RQRMNQEV 402 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYKT+ +NP GC P+LLQIPVF +Y+ + ++E+RHAP +I L D + Sbjct: 403 MELYKTYKVNPAGGCLPMLLQIPVFLGLYQGLLNAIELRHAP---FIAHLPFTDIVWLAD 459 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 L PFY+ P++M +M +Q +++P PAD QA I+ +MPVVF F +FP Sbjct: 460 LSAKDPFYIT--------PVVMGATMLLQQRLTPAPADPTQAKIMMFMPVVFTFMFLNFP 511 Query: 536 AGLIIYWSWSNVISIVQQAVIMKM 559 AGL++YW +NV+SI QQ +++ Sbjct: 512 AGLVVYWLVNNVLSIGQQWWMLRK 535 >gi|319760162|ref|YP_004124100.1| inner membrane protein [Candidatus Blochmannia vafer str. BVAF] gi|318038876|gb|ADV33426.1| inner membrane protein [Candidatus Blochmannia vafer str. BVAF] Length = 650 Score = 385 bits (989), Expect = e-104, Method: Composition-based stats. Identities = 153/582 (26%), Positives = 270/582 (46%), Gaps = 47/582 (8%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N+F+ I L S I+ W+ + Y + +NN + N +++ +S I Sbjct: 89 MDSQRNFFIGIFLIISFILWQTWEIEHYYQK-THLNNLKDNYTNSYLNSKISSSTPPNNI 147 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + ++ + IN G +D L Y +++S P+ L S + Sbjct: 148 QKNIVHSENKDIITVQTDVFLLKINKYGGNIEDAYLLKYLDNLNSQQPLRLLNSSKKYQY 207 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKI------LTPTTPIKLVFKNANNILFERTI 172 ++EL + +N E ++ I+ + T L+ + N I++ + Sbjct: 208 QTYSELTTNTNLSNEENQCKKFLYTDINNQNKYILKNNKNTLQFTLMHYDPNGIIYTKQY 267 Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR---HKPQTATNT------FGVQEGFIA 222 + Y I T+ N SI I G +++ + P N EG Sbjct: 268 LFHRNNYFITINHTIDNTSIHSIYTRILGNLVQSQYYLPIPLKNNKNKIYLSSEYEGSAY 327 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + ++D++ +++ N H W+ + KY+ ++P + Y+ D + Sbjct: 328 STNKEKYQKYSFNDMKHNNL-NIHSIGGWVALLQKYFVVAWLPITPVNNVFHTTYIDDHY 386 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 F ++ I I PG+ L+ G K I + K P ++ID+GWF+FI Sbjct: 387 --MSIGFQSDLIQIPPGQKKEFQTILWIGPK----IQDHIKSTIAPNLNLVIDYGWFWFI 440 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 ++P+F L+ +N + N+G++I+L T+ ++++ +PL K QY S A M+ +QPK+ ++EK Sbjct: 441 SQPLFKLLQLIHNYINNWGVSIILITIIIRIIMYPLTKAQYTSMAKMRMLQPKLVLIQEK 500 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +K + Q QK I+LYK +NPL GC P+L+Q+P+F A+Y ++S S+E+RHA F WI Sbjct: 501 YKHNKYQCHQK-TIELYKKEKVNPLGGCLPLLIQMPIFLALYYMLSNSVELRHAKFMLWI 559 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521 DL+ DP I PIIM ++M + K++P D Q I+ Sbjct: 560 NDLSTQDPYYIL-------------------PIIMGITMLLIQKLAPTTITDPTQKKIMT 600 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M F FP+GL++Y+ SNVI+I+QQ +I + Sbjct: 601 IMLTAFTVFFLWFPSGLVLYYIISNVITIIQQHIIYHGLSKK 642 >gi|294665120|ref|ZP_06730423.1| inner membrane protein translocase component YidC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605121|gb|EFF48469.1| inner membrane protein translocase component YidC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 574 Score = 385 bits (989), Expect = e-104, Method: Composition-based stats. Identities = 127/604 (21%), Positives = 243/604 (40%), Gaps = 73/604 (12%) Query: 1 MERNWNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M + + + L V ++ W + +++ + + S A V Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKDKAA-ANAPVAAATQSVPAARDLDAAPPSAANVPA 59 Query: 59 DDRAQALSMSPRVEL-------------------KNPSLIGSINLKGAQFDDLNLRGYHL 99 V + L ++ G D L + Sbjct: 60 AQSIPQAGAPGTVPATSSTAATPAAAGAAPVVTVTSDVLRLKLD--GRSVLDAELLQFPQ 117 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDY------VSTANNIELPNSNTVWNLISGKILTPT 153 +P+ L + + Y A + V T + + G+ T Sbjct: 118 TKDGTAPVSLLT--EDPAHPYNATSGWASERSPVPGVAGFRAEQPGTTFEMAKGQ---NT 172 Query: 154 TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKP 207 + V+ + + RT +L+ Y I D V N S ++ R + Sbjct: 173 LVVPFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRG 232 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 T ++F G + + + D N + W+ + ++ + +IP K Sbjct: 233 MTNPDSFS-FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQK 291 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + + L+ R A+ T+ PG++ +T L+ G K I + Sbjct: 292 DQ---ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVSLIAK----EDV 344 Query: 328 PRFEMLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 + ++D+ F I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY Sbjct: 345 KGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYK 404 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A M+ QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y Sbjct: 405 SGAKMRRFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALY 463 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 V+ S+E+R AP+ GWI+DL A DP I P++ M+ Sbjct: 464 WVLVESVELRQAPWLGWIQDLTARDPYFIL-------------------PLLNISIMWAT 504 Query: 505 MKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K++P P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 505 QKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEK 564 Query: 564 IGLI 567 I Sbjct: 565 PSKI 568 >gi|289662287|ref|ZP_06483868.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667652|ref|ZP_06488727.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 574 Score = 385 bits (988), Expect = e-104, Method: Composition-based stats. Identities = 130/604 (21%), Positives = 244/604 (40%), Gaps = 73/604 (12%) Query: 1 MERNWNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M + + + L V ++ W + +++ + + S A V Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKEKAA-ANAPVAAATQSVPAARDLDATTPSAANVPA 59 Query: 59 DDRAQALSMSPRVE-------------------LKNPSLIGSINLKGAQFDDLNLRGYHL 99 V L + L ++ G D L + Sbjct: 60 AQAIPQAGAPGTVPATSTTGATPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELLQFPQ 117 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDY------VSTANNIELPNSNTVWNLISGKILTPT 153 +P+ L + + Y A + V T + L G+ T Sbjct: 118 TKDGTAPVSLLT--EDAAHPYNATSGWASEHSPVPGVGGFRAEQPGTAFELAKGQ---DT 172 Query: 154 TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKP 207 + V+ N + RT +L+ Y I D V N S ++ R + Sbjct: 173 LVVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRG 232 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 T ++F G + + + D N + W+ + ++ + +IP K Sbjct: 233 MTNPDSFS-FNGATWYSPQEGYERRAFKDYMNDGGLNRQITGGWMALLQHHFFTAWIPQK 291 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + + L+ R A+ T+ PG++ +T L+ G K I + Sbjct: 292 DQ---ASLYVLNQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVGLIAK----EDV 344 Query: 328 PRFEMLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 + ++D+ F I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY Sbjct: 345 KGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYK 404 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A M+ QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y Sbjct: 405 SGAKMRRFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALY 463 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 V+ S+E+R AP+ GWI+DL A DP I P++ M+ Sbjct: 464 WVLVESVELRQAPWLGWIQDLTARDPYFIL-------------------PLLNISIMWAT 504 Query: 505 MKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K++P P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 505 QKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEK 564 Query: 564 IGLI 567 I Sbjct: 565 PSKI 568 >gi|78050041|ref|YP_366216.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123583682|sp|Q3BLZ7|OXAA_XANC5 RecName: Full=Inner membrane protein oxaA gi|78038471|emb|CAJ26216.1| preprotein translocase subunit YidC [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 574 Score = 384 bits (987), Expect = e-104, Method: Composition-based stats. Identities = 126/546 (23%), Positives = 233/546 (42%), Gaps = 51/546 (9%) Query: 38 KNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + Q + Q A A +P V L + L ++ G D L + Sbjct: 58 PSAQPIPQAGAPGTVPATSSTAATPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELLQF 115 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDY------VSTANNIELPNSNTVWNLISGKILT 151 P+ L + + Y A + V T + + G+ Sbjct: 116 PQTKDGTEPVSLLT--EDPAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFEMAKGQ--- 170 Query: 152 PTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-----H 205 T + V+ + + RT +L+ Y I D V N S ++ R Sbjct: 171 NTLVVPFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILS 230 Query: 206 KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP 265 + T ++F G + + + D N + W+ + ++ + +IP Sbjct: 231 RGMTNPDSFS-FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIP 289 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 K+ + L+ R A+ T+ PG++ +T L+ G K I Sbjct: 290 QKDQ---ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVNLIAK----E 342 Query: 326 AIPRFEMLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 + + ++D+ F I + +F ++S+ ++ + N+G AI+ V ++L +PL+ Q Sbjct: 343 DVKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQ 402 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y S A M+ QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA Sbjct: 403 YKSGAKMRRFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFA 461 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y V+ S+E+R AP+ GWI+DL A DP I P++ M+ Sbjct: 462 LYWVLVESVELRQAPWLGWIQDLTARDPYFIL-------------------PLLNISIMW 502 Query: 503 IQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 K++P P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG Sbjct: 503 ATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHG 562 Query: 562 AEIGLI 567 + I Sbjct: 563 EKPSKI 568 >gi|325926222|ref|ZP_08187580.1| Preprotein translocase subunit YidC [Xanthomonas perforans 91-118] gi|325543404|gb|EGD14829.1| Preprotein translocase subunit YidC [Xanthomonas perforans 91-118] Length = 574 Score = 384 bits (987), Expect = e-104, Method: Composition-based stats. Identities = 126/546 (23%), Positives = 234/546 (42%), Gaps = 51/546 (9%) Query: 38 KNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + Q + Q A A +P V L + L ++ G D L + Sbjct: 58 PSAQPIPQAGAPGTVPATSSTAATPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELLQF 115 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDY------VSTANNIELPNSNTVWNLISGKILT 151 +P+ L + + Y A + V T + + G+ Sbjct: 116 PQTKDGTAPVSLLT--EDPAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFEMAKGQ--- 170 Query: 152 PTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-----H 205 T + V+ + + RT +L+ Y I D V N S ++ R Sbjct: 171 NTLVVPFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILS 230 Query: 206 KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP 265 + T ++F G + + + D N + W+ + ++ + +IP Sbjct: 231 RGMTNPDSFS-FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIP 289 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 K+ + L+ R A+ T+ PG++ +T L+ G K I Sbjct: 290 QKDQ---ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVSLIAK----E 342 Query: 326 AIPRFEMLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 + + ++D+ F I + +F ++S+ ++ + N+G AI+ V ++L +PL+ Q Sbjct: 343 DVKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQ 402 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y S A M+ QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA Sbjct: 403 YKSGAKMRRFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFA 461 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y V+ S+E+R AP+ GWI+DL A DP I P++ M+ Sbjct: 462 LYWVLVESVELRQAPWLGWIQDLTARDPYFIL-------------------PLLNISIMW 502 Query: 503 IQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 K++P P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG Sbjct: 503 ATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHG 562 Query: 562 AEIGLI 567 + I Sbjct: 563 EKPSKI 568 >gi|242278540|ref|YP_002990669.1| hypothetical protein Desal_1066 [Desulfovibrio salexigens DSM 2638] gi|259515640|sp|C6C0J6|OXAA_DESAD RecName: Full=Inner membrane protein oxaA gi|242121434|gb|ACS79130.1| 60 kDa inner membrane insertion protein [Desulfovibrio salexigens DSM 2638] Length = 539 Score = 384 bits (987), Expect = e-104, Method: Composition-based stats. Identities = 154/576 (26%), Positives = 251/576 (43%), Gaps = 59/576 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV---- 56 M+ N +A+ALS ++ WQ + + + QT + VD+S A Sbjct: 1 MD-NKRVILAVALSFAVLLGWQFLFPP--QPQQPAPAQQEQTAQPNQAVDSSVAGPVSNQ 57 Query: 57 ---LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A + R+ ++ P IN +G + L+ + + ++SP V ++ Sbjct: 58 LPDPASTSAIVSAKGTRLTVETPLYSAVINSQGGLLESFKLKKFKATIDADSPDVDMVGT 117 Query: 114 SNTKNAYFAE-LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERT 171 + A L+ ++T N NL K+ T L+F+ ER Sbjct: 118 NALDKAPMGLILNGIATWANGVWGYEGANLNLEGDKLGT------LIFRGDVEGFRIERR 171 Query: 172 ISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 ++ ++YL V N S A + + IA + LV Sbjct: 172 LTFHADNYLIDEDVRVINKSNPSGMGRIAFTTATKSLTAADDRYNPTR--IAWFNAEGLV 229 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 E+ D + W I Y+ +P ++ + L D R A+ Sbjct: 230 EESDRDTLSETGVTESGKVEWAAIDSNYFILALVPGADS--VTMKGKLQDDIFRIAAE-- 285 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 ++ + G + + +L+ ID+GWF IAKP+ + + Sbjct: 286 -QNVSFDKDIERKLACSYYFGPMDAQLMAKVPGELS-----KAIDFGWFDIIAKPLVVAL 339 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 +F+ N+GIAI+L T+ +K+LF+PL+ K Y S MK +QP + +LREK + Sbjct: 340 EWFHQYTNNYGIAIILLTIVIKILFWPLSHKSYKSMEQMKRLQPMMAKLREKHGDD-REA 398 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA--------PFWGWI 462 L K M+QLYKT+N+NP GC P+LLQIPVFF +YK + ++ +RHA W+ Sbjct: 399 LNKEMMQLYKTYNVNPAGGCLPMLLQIPVFFGLYKALMGTVALRHADFVHFLPFTDIVWL 458 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+A DP I PI+M +MF+Q KM+P D Q I+ + Sbjct: 459 ADLSAKDPLYIT-------------------PIVMGATMFLQQKMTPSAGDPTQQKIMMF 499 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +P+VF F +FP+GL++YW +NV+SI QQ ++M+ Sbjct: 500 LPLVFTFMFLNFPSGLVVYWMVNNVLSIAQQWMMMR 535 >gi|219681403|ref|YP_002467788.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471077|ref|ZP_05635076.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254772755|sp|B8D8H9|OXAA_BUCA5 RecName: Full=Membrane protein oxaA gi|219624246|gb|ACL30401.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 532 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 143/573 (24%), Positives = 259/573 (45%), Gaps = 66/573 (11%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N+F+ L S ++ AWQ+ ++ + I + V + + I Sbjct: 1 MEVQRNFFIFAFLFVSFLLWQAWQS-----QMFLNKKTNEKIDPIFHFIDVKKNKKKIFI 55 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + +N+ G ++ +L Y + S+ P L + + Sbjct: 56 KN---------------DVISLVVNMYGGDVEEASLLAYKDTLYSSRPFKLL--ETGSDF 98 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGK--ILTP---TTPIKLVFKNANNILFERTIS 173 Y A+ + N + + +L P + + + + N +++++T Sbjct: 99 IYQAQSGLIGKDGPDSSINDSRPLYSANKNFFVLGPNEKELRVPIKWVSKNGVIYKKTFI 158 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L + Y +I V N S + + + G+I + K + F +Q G Sbjct: 159 LKPNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKRNVYSGNFALQTFRGAAYSSD 218 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D + K+ I + + + W+ + +Y+A +IP L H Sbjct: 219 DNKYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIPDNLGKNTIYTSSLD--HDTA 276 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + I I P + L+ G + + L P ++ +D+GW +F+++P Sbjct: 277 VIGYKSPIINIPPNSRSIIKSKLWIGPEIQKEMK-----LVAPNLDLTVDYGWLWFLSQP 331 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L++ Y+++GN+G +I+L T ++ L +PL K QY+S A M+ +QPKI E++EKF + Sbjct: 332 LFKLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQYISMAKMRALQPKIQEIKEKFSK 391 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + MI LYK INPL G PI +Q+P+F ++Y ++ S+E+RHAPF WI DL Sbjct: 392 DK-QRISQEMILLYKKEKINPLGGFLPIFIQMPIFLSLYYMLIGSVELRHAPFLLWIHDL 450 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWM 523 ++ DP + P+IM L+MF K+S +D Q I+N+M Sbjct: 451 SSQDPYYVL-------------------PVIMGLTMFFIQKISSTNHISDPLQKKIMNFM 491 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 PV+F FP+GL++Y+ SN+++I+QQ I Sbjct: 492 PVIFTAFFLWFPSGLVLYYIISNLVTIIQQKFI 524 >gi|15616645|ref|NP_239857.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11131221|sp|P57131|OXAA_BUCAI RecName: Full=Membrane protein oxaA gi|25299099|pir||G84931 60 kD inner-membrane protein [imported] - Buchnera sp. (strain APS) gi|10038708|dbj|BAB12743.1| 60 kD inner-membrane protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 532 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 144/573 (25%), Positives = 259/573 (45%), Gaps = 66/573 (11%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N+F+ L S ++ AWQ+ ++ + I + V + + I Sbjct: 1 MEVQRNFFIFAFLFVSFLLWQAWQS-----QMFLNKKTNEKIDPIFHFIDVKKNKKKIFI 55 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + +N+ G ++ +L Y + S+ P L + + Sbjct: 56 KN---------------DVISLVVNMYGGDVEEASLLAYKDTLYSSRPFKLL--ETGSDF 98 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGK--ILTP---TTPIKLVFKNANNILFERTIS 173 Y A+ + N + + +L P + + + + N +++++T Sbjct: 99 IYQAQSGLIGKDGPDSSINDSRPLYSANKNFFVLGPNEKELRVPIKWLSKNGVIYKKTFI 158 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L + Y +I V N S + + + G+I + K + F +Q G Sbjct: 159 LKPNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKRNVYSGNFALQTFRGAAYSSD 218 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D + K+ I + + + W+ + +Y+A +IP L H Sbjct: 219 DNKYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIPDNLGKNTIYTSSLD--HDTA 276 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + I I P + L+ G K + L P ++ +D+GW +F+++P Sbjct: 277 VIGYKSPIINIPPNSRSIIKSKLWIGPKIQKEMK-----LVAPNLDLTVDYGWLWFLSQP 331 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L++ Y+++GN+G +I+L T ++ L +PL K QY+S A M+ +QPKI E++EKF + Sbjct: 332 LFKLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQYISMAKMRALQPKIQEIKEKFSK 391 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + MI LYK INPL G PI +Q+P+F ++Y ++ S+E+RHAPF WI DL Sbjct: 392 DK-QRISQEMILLYKKEKINPLGGFLPIFIQMPIFLSLYYMLIGSVELRHAPFLLWIHDL 450 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWM 523 ++ DP + P+IM L+MF K+S +D Q I+N+M Sbjct: 451 SSQDPYYVL-------------------PVIMGLTMFFIQKISSTNHISDPLQKKIMNFM 491 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 PV+F FP+GL++Y+ SN+++I+QQ I Sbjct: 492 PVIFTAFFLWFPSGLVLYYIISNLVTIIQQKFI 524 >gi|256548861|gb|ACU82912.1| 60 kD inner-membrane protein [Buchnera aphidicola (Acyrthosiphon kondoi)] Length = 537 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 137/514 (26%), Positives = 240/514 (46%), Gaps = 44/514 (8%) Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 I+ A + ++ +KN + +N+ G ++ +L Y + S+ P L + Sbjct: 45 INTNKNAKKNTQQIFIKNNVINLVVNMYGGDIEEASLLSYKDKLYSSKPFKLL--ETAPD 102 Query: 118 NAYFAELDYVSTANNIE-----LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y A+ + P ++ N K + + + + N + + +T Sbjct: 103 FIYQAQSGLIGKDGPDSSEKNSRPLYSSEKNFFELKREKKELRVPIKWVSQNGVTYTKTF 162 Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVL 224 L Y +I + N S + ++ + G+I + K + F +Q G Sbjct: 163 ILKPNSYDIQIEYDIYNPSKEILKMNMFGQIKQTVNLPKKRNIYSGNFALQTFRGAAYSS 222 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 D + K+ I + + N W+ + +Y+A +IP L H Sbjct: 223 SDNKYEKYKFDMISDNKNLHVITENGWIAMLQQYFAVAWIPQNLGQNIIYTSNLD--HGI 280 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + ++ I +LP + L+ G + + +L P ++ +D+GW +F+++ Sbjct: 281 VAIGYKSSLINVLPHSRSIIKSKLWIGPEIQKEM-----NLVAPNLDLTVDYGWLWFLSQ 335 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N+VGN+G +I+L T +K + +PL K QYVS M+ +QPKI E++EKF Sbjct: 336 PLFKLLTILHNVVGNWGFSIILITFIMKAVTYPLTKAQYVSMLKMRALQPKIKEIKEKFS 395 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + + MI LYK INPL G PI +Q+P+F ++Y ++ S+E+RHAPF WI D Sbjct: 396 NDK-QRISQEMIVLYKKEKINPLTGFLPIFIQMPIFLSLYYMLIGSVELRHAPFLLWIHD 454 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNW 522 L++ DP + PIIM L+MF K S +D Q I+N+ Sbjct: 455 LSSQDPYYVL-------------------PIIMGLTMFFIQKTSSANHVSDPFQKKIMNF 495 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 MPV+F FP+GL++Y+ SN+++I+QQ I Sbjct: 496 MPVIFTAFFLWFPSGLVLYYIISNLVTIIQQKFI 529 >gi|219681959|ref|YP_002468343.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254772756|sp|B8D6T3|OXAA_BUCAT RecName: Full=Membrane protein oxaA gi|219621692|gb|ACL29848.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085765|gb|ADP65847.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086342|gb|ADP66423.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 532 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 143/573 (24%), Positives = 259/573 (45%), Gaps = 66/573 (11%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N+F+ L S ++ AWQ+ ++ + I + V + + I Sbjct: 1 MEVQRNFFIFAFLFVSFLLWQAWQS-----QMFLNKKTNEKIDPIFHFIDVKKNKKKIFI 55 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + +N+ G ++ +L Y + S+ P L + + Sbjct: 56 KN---------------DVISLVVNMYGGDVEEASLLAYKDTLYSSRPFKLL--ETGSDF 98 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGK--ILTP---TTPIKLVFKNANNILFERTIS 173 Y A+ + N + + +L P + + + + N +++++T Sbjct: 99 IYQAQSGLIGKDGPDSSINDSRPLYSANKNFFVLGPNEKELRVPIKWLSKNGVIYKKTFI 158 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L + Y +I V N S + + + G+I + K + F +Q G Sbjct: 159 LKPNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKRNVYSGNFALQTFRGAAYSSD 218 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D + K+ I + + + W+ + +Y+A +IP L H Sbjct: 219 DNKYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIPDNLGKNTIYTSSLD--HDTA 276 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + I I P + L+ G + + L P ++ +D+GW +F+++P Sbjct: 277 VIGYKSPIINIPPNSRSIIKSKLWIGPEIQKEMK-----LVAPNLDLTVDYGWLWFLSQP 331 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L++ Y+++GN+G +I+L T ++ L +PL K QY+S A M+ +QPKI E++EKF + Sbjct: 332 LFKLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQYISMAKMRALQPKIQEIKEKFSK 391 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + MI LYK INPL G PI +Q+P+F ++Y ++ S+E+RHAPF WI DL Sbjct: 392 DK-QRISQEMILLYKKEKINPLGGFLPIFIQMPIFLSLYYMLIGSVELRHAPFLLWIHDL 450 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWM 523 ++ DP + P+IM L+MF K+S +D Q I+N+M Sbjct: 451 SSQDPYYVL-------------------PVIMGLTMFFIQKISSTNHISDPLQKKIMNFM 491 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 PV+F FP+GL++Y+ SN+++I+QQ I Sbjct: 492 PVIFTAFFLWFPSGLVLYYIISNLVTIIQQKFI 524 >gi|32490762|ref|NP_871016.1| hypothetical protein WGLp013 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|38502995|sp|Q8D3I8|OXAA_WIGBR RecName: Full=Membrane protein oxaA gi|25165968|dbj|BAC24159.1| yidC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 540 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 146/572 (25%), Positives = 267/572 (46%), Gaps = 59/572 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN--ERKNIQTVKQPNQVDNSYAAVLID 59 + N+ + I ++ +++ AWQ+ + + N+ E+KNI+ + Sbjct: 4 QNNFLFIAFIFVTFMMLDAWQSESYDYKSLDKNHIIEKKNIE---------------NKN 48 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + S + + I IN G ++ +LR Y + +N P+ L +KN Sbjct: 49 INKEVFSRENYITVITDLFILKINTYGGDIEEASLRTYLSNTKNNLPLKIL---DRSKNF 105 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKIL------TPTTPIKLVFKNANNILFERTIS 173 + T N+ ++ N + N IS K L + + L + N + + + Sbjct: 106 IYKLKSGFITKNDHDINNLIHIPNFISDKKLYILEDNSDYLQVPLFYNGENGLKYVKNFI 165 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-----FGVQEGFIAVLGDK 227 ++ + KI ++ N + D++ G++ + N F G + Sbjct: 166 FKKNSFSLKINYSIKNTNKDKMEMMFFGQLEQSIKDQEINNGYNFNFHTYRGAAYSSDNN 225 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + +S+I N SN W+ + +Y+ +IP E + K + + Sbjct: 226 KYKKYDFSEISNDKNLNVITSNGWIAMLQQYFIVAWIPKIENKYKFYTKNI-PKDEKVSI 284 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F + +I + + L+ G K ++ + +L + +D+GW +FIA+P+ Sbjct: 285 GFQSELFSIDQEEEKNIESTLWIGPKLQDKMYEVDANLG-----LTVDYGWLWFIAQPLL 339 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + Y + N+GI+I++ T V+ + FPL K QY S A M+ +QPKI E++ KF Sbjct: 340 QLLKFIYKYINNWGISIIIITFMVRGIMFPLTKAQYTSMAKMRILQPKIIEIKNKFSNDK 399 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + K M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHA F WI DL++ Sbjct: 400 -KRQSKEMMSLYKKQKVNPLGGCMPLIIQMPIFLALYYMLSGSVELRHAHFVLWINDLSS 458 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PIIM ++MF+ K+SP +D Q I+++MP++ Sbjct: 459 KDPYYIL-------------------PIIMGITMFLIQKISPSSISDPVQKKIVSFMPLI 499 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I K Sbjct: 500 FTIFFLWFPSGLVLYYIISNLVTIIQQYIIYK 531 >gi|294627440|ref|ZP_06706024.1| inner membrane protein translocase component YidC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598261|gb|EFF42414.1| inner membrane protein translocase component YidC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 574 Score = 382 bits (980), Expect = e-103, Method: Composition-based stats. Identities = 127/604 (21%), Positives = 244/604 (40%), Gaps = 73/604 (12%) Query: 1 MERNWNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M + + + L V ++ W + +++ + + S A V Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKDKAA-ANAPVAAATQSVPAARDLDAAAPSAANVPA 59 Query: 59 DDRAQALSMSPRVEL-------------------KNPSLIGSINLKGAQFDDLNLRGYHL 99 V + L ++ G D L + Sbjct: 60 AQSIPQAGAPGTVPATSSTAATPAAAGAAPVVTVTSDVLRLKLD--GRSVLDAELLQFPQ 117 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDY------VSTANNIELPNSNTVWNLISGKILTPT 153 +P+ L + + Y A + V T + + G+ T Sbjct: 118 TKDGTAPVSLLT--EDPAHPYNATSGWASERSPVPGVAGFRAEQPGTTFEMAKGQ---NT 172 Query: 154 TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKP 207 + V+ +++ RT +L+ Y I D V N S ++ R + Sbjct: 173 LVVPFVWNGPDDVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRG 232 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 T ++F G + + + D N + W+ + ++ + +IP K Sbjct: 233 MTNPDSFS-FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQK 291 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + + L+ R A+ T+ PG++ +T L+ G K I + Sbjct: 292 DQ---ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVSLIAK----EDV 344 Query: 328 PRFEMLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 + ++D+ F I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY Sbjct: 345 KGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYK 404 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A M+ QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y Sbjct: 405 SGAKMRRFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALY 463 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 V+ S+E+R AP+ GWI+DL A DP I P++ M+ Sbjct: 464 WVLVESVELRQAPWLGWIQDLTARDPYFIL-------------------PLLNISIMWAT 504 Query: 505 MKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K++P P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 505 QKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEK 564 Query: 564 IGLI 567 I Sbjct: 565 PSKI 568 >gi|189426685|ref|YP_001953862.1| hypothetical protein Glov_3642 [Geobacter lovleyi SZ] gi|254772788|sp|B3E3S0|OXAA_GEOLS RecName: Full=Inner membrane protein oxaA gi|189422944|gb|ACD97342.1| 60 kDa inner membrane insertion protein [Geobacter lovleyi SZ] Length = 530 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 159/564 (28%), Positives = 267/564 (47%), Gaps = 42/564 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-YAAVLID 59 ME +A+ LS+ + Y + FY + ++T S AA + Sbjct: 1 ME--KRTILAVVLSIGVFYLFSFFYGPEKKPAPAAVSVPVKTENVGAAPAVSVQAAAIAP 58 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + V ++ + GA L L+G+ + V LL+ ++ Sbjct: 59 VVVPKIVSAADVTVETERYTAVFSGVGASLKSLTLKGFRETNKPGAAQVKLLANADPALP 118 Query: 120 YFAE--LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE- 176 F+ + + +A PN +++ L+SG+ + + +A + +T + D Sbjct: 119 SFSTRGVGFALSAQAAYSPNVSSL-KLLSGEK----KQLVFTYVDAQGFVVRKTYTFDGT 173 Query: 177 HYLFKIVDTVTNNSIDQIRFS-PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + + NNS I + P + + ++ D SL Sbjct: 174 GYGIALETQLVNNSAAPIAGAFQYLFTSPFDPPQKDGRY--ETYGSSLYADGSLHTDAPK 231 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 ++ S+ + + +W I+DKY+ S + + + K + G+ ++ S + Sbjct: 232 NVA-SATKKYDKGITWAAINDKYFLSALLSVNNSIASVELKKSAAGY--LESDISTPAFS 288 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG+++T + LF G KE + L E +D GWF IAKPM + +FY Sbjct: 289 VAPGQAVTVAHKLFIGPKEIDILKAQGSSL-----EQSLDLGWFSAIAKPMLYSLKFFYR 343 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+GIAI++ TV +K+ FFPL K Y S M +QPK+ L+EK+K + +A+ Sbjct: 344 YVGNYGIAIIIITVILKIFFFPLTHKSYKSMKEMGKLQPKMAALKEKYKNDKD-AMNRAV 402 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LY+ H +NPL GC P+++QIPVFFA+YK + S+E+RHAPF WI DL+ DP + Sbjct: 403 MELYRDHKVNPLGGCLPMIVQIPVFFALYKALMYSIELRHAPFMFWITDLSDKDPFYVT- 461 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 P+IM ++MFIQ KM+P D+ Q I+ +PV+F F SFP Sbjct: 462 ------------------PVIMGVTMFIQQKMTPSNMDEMQQKIMLGLPVIFTFMFLSFP 503 Query: 536 AGLIIYWSWSNVISIVQQAVIMKM 559 +GL++YW +N+++I QQA I K+ Sbjct: 504 SGLVLYWLINNILTIGQQAYINKL 527 >gi|303247340|ref|ZP_07333613.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio fructosovorans JJ] gi|302491254|gb|EFL51143.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio fructosovorans JJ] Length = 537 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 149/558 (26%), Positives = 244/558 (43%), Gaps = 57/558 (10%) Query: 20 AWQNFYVY----PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 W + P+ E + P + + + A A A + + + Sbjct: 19 GWNFLFPTKPPVPKTETTTQTQAPAPDKPAPGKTE-AQAPKAETLAAFAPTPGKTLTVDT 77 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 P N G +L+ Y ++++SP+V L++ A L + Sbjct: 78 PLYTAVFNSTGGLLSRFSLKQYRQTIAADSPLVDLINEKAHAK---APLGLILNGTPT-- 132 Query: 136 PNSNTVWNLISGKILTP---TTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSI 191 N W++ G + T + V + + I +R ++ +YL +++N Sbjct: 133 -WQNVEWSVQGGDVTLDASGTASVTFVGRMGDTI-IKRVLTFSGSNYLIDEKLSLSNTGA 190 Query: 192 DQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251 + R + + +++ + A D S +E +S+ + + + W Sbjct: 191 NPARERLSMTVAVDRLSAEGDSYNPTQ---AAFYDTSGLELFHSEKKLAEGIADEKPVEW 247 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 I Y+ IP ++ + + I G T + G Sbjct: 248 GAIMSNYFLVGVIPDTTDLR----GKAKIEDGLFRLAVDKDGLEIPAGGRQDLTISYYLG 303 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 K + +A ID+GWF FIAKP+ L+ +FYN VGN+G+AI+L TV + Sbjct: 304 PKAPKFL-----AMAPHHLSAAIDYGWFDFIAKPLVKLLHFFYNYVGNYGVAIILLTVLI 358 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 K +F+PL+ K Y S MK +QP + +LREK+K Q + + M+QLYKT+ +NP GC Sbjct: 359 KAIFWPLSHKSYKSMEQMKKLQPLLSQLREKYKDD-RQKMNEEMMQLYKTYKVNPAGGCL 417 Query: 432 PILLQIPVFFAIYKVISISLEMRHA--------PFWGWIKDLAAADPTNIFTLFGILPFY 483 P+++QIPVFF +Y+ + S+E+RHA W+ DL+A DP I Sbjct: 418 PMVVQIPVFFGLYQALLHSIELRHAAFITYFPFTHHIWLADLSAKDPYYIT--------- 468 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 P+IM +MF+Q KM+P P D QA I+ MPV+F F +FP+GL++YW Sbjct: 469 ----------PLIMGATMFLQQKMTPAPGDPTQAKIMLLMPVIFTFMFLNFPSGLVVYWL 518 Query: 544 WSNVISIVQQAVI-MKMH 560 +NVISI QQ + K H Sbjct: 519 VNNVISIAQQYWMLNKKH 536 >gi|311086918|gb|ADP66998.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 532 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 142/573 (24%), Positives = 258/573 (45%), Gaps = 66/573 (11%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N+F+ L S ++ AWQ+ ++ + I + V + + I Sbjct: 1 MEVQRNFFIFAFLFVSFLLWQAWQS-----QMFLNKKTNEKIDPIFHFIDVKKNKKKIFI 55 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + +N+ G ++ +L Y + S+ P L + + Sbjct: 56 KN---------------DVISLVVNMYGGDVEEASLLAYKDTLYSSRPFKLL--ETGSDF 98 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGK--ILTP---TTPIKLVFKNANNILFERTIS 173 Y A+ + N + + +L P + + + + N +++++ Sbjct: 99 IYQAQSGLIGKDGPDSSINDSRPLYSANKNFFVLGPNEKELRVPIKWLSKNGVIYKKIFI 158 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L + Y +I V N S + + + G+I + K + F +Q G Sbjct: 159 LKPNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKRNVYSRNFALQTFRGAAYSSD 218 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D + K+ I + + + W+ + +Y+A +IP L H Sbjct: 219 DNKYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIPDNLGKNTIYTSSLD--HDTA 276 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + I I P + L+ G + + L P ++ +D+GW +F+++P Sbjct: 277 VIGYKSPIINIPPNSRSIIKSKLWIGPEIQKEMK-----LVAPNLDLTVDYGWLWFLSQP 331 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L++ Y+++GN+G +I+L T ++ L +PL K QY+S A M+ +QPKI E++EKF + Sbjct: 332 LFKLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQYISMAKMRALQPKIQEIKEKFSK 391 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + MI LYK INPL G PI +Q+P+F ++Y ++ S+E+RHAPF WI DL Sbjct: 392 DK-QRISQEMILLYKKEKINPLGGFLPIFIQMPIFLSLYYMLIGSVELRHAPFLLWIHDL 450 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWM 523 ++ DP + P+IM L+MF K+S +D Q I+N+M Sbjct: 451 SSQDPYYVL-------------------PVIMGLTMFFIQKISSTNHISDPLQKKIMNFM 491 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 PV+F FP+GL++Y+ SN+++I+QQ I Sbjct: 492 PVIFTAFFLWFPSGLVLYYIISNLVTIIQQKFI 524 >gi|158520119|ref|YP_001527989.1| 60 kDa inner membrane insertion protein [Desulfococcus oleovorans Hxd3] gi|158508945|gb|ABW65912.1| 60 kDa inner membrane insertion protein [Desulfococcus oleovorans Hxd3] Length = 559 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 159/558 (28%), Positives = 262/558 (46%), Gaps = 37/558 (6%) Query: 21 WQNFYVYPRIEEMNNERKNIQT--------------VKQPNQVDNSYAAVLIDDR-AQAL 65 WQ F++ + + + V P + D Sbjct: 20 WQVFFIGSPEAPVRPDGAPVAPAQEAAAPPNPAAGDVALPRENAPPEQVTPADSALVPTE 79 Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD 125 + + V ++ ++N GA D L+ Y SP LLS +N + + L+ Sbjct: 80 APAAPVVVETGLYTVTLNGNGAHISDFVLKNYRETNDPASPAKRLLSDNNPQGSLRVNLE 139 Query: 126 YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN--ANNILFERTISLD-EHYLFKI 182 + A P S ++ G ++ P +VF + E+ + + Y+ + Sbjct: 140 GDTLAGMANGPYS---ADVADGPVVVSDQPRSVVFTRQFPGGRVVEKRYTFTPDSYMIDL 196 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 T+ N S + + + R+ + V EG A++G L E K DI+K Sbjct: 197 AVTLKNGSETPLSGNLAVTLARYFTDDGSRF--VFEGPSALVG-HDLEEIKLGDIQKK-- 251 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 ++ S +W+ I ++Y+ S IP ET + + A + A T+ + Sbjct: 252 ASLTGSLAWISIQNRYFMSALIP--ETPTEAAMRLSRTPEQVVTATYLAPARTVGANSTE 309 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 T +F G K + A + +++G+F FIA+P LM++ Y + N+GI Sbjct: 310 TYRFSVFMGPKSVQIL-----GRAGHALDRAVNFGFFDFIARPCLWLMNFLYRYIPNYGI 364 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI++ T+ KL+F+PL K Y S A MK + P + E+REK+K + + + ++ LY+T+ Sbjct: 365 AIIIITLLFKLVFWPLGNKSYKSMAEMKRLAPLMAEIREKYKDD-RKKMNEEVMNLYRTY 423 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 INPL GC PIL+QIPVFFA Y+++ ++E+RHAPF+GWI DL+A D F + LP Sbjct: 424 KINPLGGCLPILVQIPVFFAFYRMLYQAIELRHAPFFGWINDLSAPDRLFNFDVS--LPL 481 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 P + + + I+M +M IQ K+ PP D QA I+ MP+ F F +FP+GL++YW Sbjct: 482 IAPP-VGIPVLTIVMGATMIIQQKLQPPMGDPTQAKIMMLMPIFFTFIFINFPSGLVLYW 540 Query: 543 SWSNVISIVQQAVIMKMH 560 +N ISI QQ I + + Sbjct: 541 LVNNTISIFQQYYITRKN 558 >gi|197120418|ref|YP_002140845.1| preprotein translocase subunit YidC [Geobacter bemidjiensis Bem] gi|254772787|sp|B5EGX9|OXAA_GEOBB RecName: Full=Inner membrane protein oxaA gi|197089778|gb|ACH41049.1| preprotein translocase subunit YidC [Geobacter bemidjiensis Bem] Length = 537 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 147/571 (25%), Positives = 258/571 (45%), Gaps = 51/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN--------NERKNIQTVKQPNQVDNS 52 ME +A+ LS+ ++YA+ + P+ + + Sbjct: 1 ME--KRLIIAVLLSIGVLYAYSFIFPTPKPLTAPGAKQAAMSSASAPALPAAVAPTAGTA 58 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A QA +++ V + + +G L+ Y V + L++ Sbjct: 59 PLAAPAPQAGQAPAVAKDVTVDTDLYTAVFSTQGGGLKKFVLKKYKETVGPQGKDIVLVN 118 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVFKNANNILFE 169 + +A L + + + + +++ +G+ ++ + I F Sbjct: 119 ETAANR--YALL----SDSREFGLSPDALYSASTGEVKVTNGGKGSLEFTTTTSQGITFR 172 Query: 170 RTISLD-EHYLFKIVDTVTNNSIDQIRFSPRG-RIMRHKPQTATNTFGVQEGFIAVLGDK 227 + + + Y + + V N + + + R + V + L + Sbjct: 173 KVYTFSGDAYRIGLTEEVQNAGNVALTGAVHLLQTSRVVEAKKEGRYEVH--APSTLSEG 230 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K ++ K+ + + +W +DKY+ I K + SQ + + Q Sbjct: 231 KVKVDKLDNLLKNPVQYGKD-IAWSAFADKYFMDGIIADKGSI--SQVRITRPANDAIQR 287 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + +T+ PG+ ++ G K+ + L R + +ID+GWF IAKP+ Sbjct: 288 DIVSPTVTVAPGQRSAVNYAVYYGPKDLDILK-----LQGNRLDEVIDYGWFGPIAKPLV 342 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 + + Y GN+GIAI++ T +KL+FFPL K Y S +M+ +QPK+ EL+EKFK Sbjct: 343 HSLKFLYKYTGNYGIAIIIITFILKLVFFPLTHKSYKSMKDMQKLQPKMTELKEKFKNDR 402 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + +A+++LYKTH +NPL GC P+++QIPVFF +Y+ + S+E+RHAPF+ WI DL+A Sbjct: 403 D-AMNRAVMELYKTHKVNPLGGCLPMVVQIPVFFGLYRALMYSIELRHAPFYLWITDLSA 461 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP + PIIM ++MFIQ KM+P D QA ++ +P+VF Sbjct: 462 KDPYYVT-------------------PIIMGVTMFIQQKMTPTNMDPVQAKMMLMLPIVF 502 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F +FP+GL+IYW +NV++I QQ I K Sbjct: 503 TFMFLNFPSGLVIYWLVNNVLTIAQQMYINK 533 >gi|22654213|sp|P29431|OXAA_BUCAP RecName: Full=Membrane protein oxaA Length = 536 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 135/573 (23%), Positives = 257/573 (44%), Gaps = 64/573 (11%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N+F+ L S ++ AWQ Q++K+ + + + + + Sbjct: 1 MELQRNFFIFAFLFVSFLLWQAWQ-----------------SQSLKKNKKNEETNSFFHL 43 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + ++ +KN L IN+ G ++ +L Y ++S + L + S+ Sbjct: 44 NHKKE---DKNQIIIKNDVLRLVINMYGGDIEEASLLDYKTQLNSPENLKLLETKSDF-- 98 Query: 119 AYFAELDYVSTAN-----NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ + N P + N + + F N I + + Sbjct: 99 VYQAQSGLIGKDGLDNSINKIRPLYSAKKNFFELGHNEKELRVPITFIAKNGITYIKNFI 158 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y ++ + N S ++ + G++ + + F +Q G Sbjct: 159 LKPGKYNVEVEYDINNLSNKKLELNIFGQLKQTVKLPKNRDIYSGNFALQTFRGAAYSSS 218 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE-TSFHSQFKYLSDGHAR 284 D + K+ +I + + W+ + +Y+ ++P +S + + D Sbjct: 219 DAKYEKYKFDNIANHEHLHIITHHGWIAMLQQYFVVAWVPDTNISSSNIIYTSYLDNDGI 278 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + ++ I I + L+ G ++ + L P ++ +D+G+ +F+++ Sbjct: 279 AIIGYKSSLINIPSNSRYIIKSKLWIGPEKQQEM-----ALVAPNLDLTVDYGFLWFLSQ 333 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+S +N +GN+G +I+L T +K + +PL K QY S + M+ +QPKI+EL++ F Sbjct: 334 PLFKLLSTIHNFIGNWGFSIILITFMMKAITYPLTKAQYTSMSKMRELQPKINELKKNFG 393 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + K ++ LYK INPL GC P+ +Q+P+F ++Y ++ S+E+RHAPF WIKD Sbjct: 394 HDK-QRMSKEIMALYKKEKINPLGGCLPVFIQMPIFLSLYYMLIGSVELRHAPFLFWIKD 452 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+ DP + PI M L+MF + S +D Q I+++M Sbjct: 453 LSDQDPYYVL-------------------PIFMGLTMFFIQRTSSNNISDPFQQKIMHFM 493 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P +F FP+GL++Y+ SN+++I+QQ I Sbjct: 494 PFIFTVFFLWFPSGLVLYYIVSNLVTIIQQKYI 526 >gi|21672310|ref|NP_660377.1| inner membrane protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|21622909|gb|AAM67588.1| inner membrane protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 537 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 135/573 (23%), Positives = 257/573 (44%), Gaps = 64/573 (11%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N+F+ L S ++ AWQ Q++K+ + + + + + Sbjct: 2 MELQRNFFIFAFLFVSFLLWQAWQ-----------------SQSLKKNKKNEETNSFFHL 44 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + ++ +KN L IN+ G ++ +L Y ++S + L + S+ Sbjct: 45 NHKKE---DKNQIIIKNDVLRLVINMYGGDIEEASLLDYKTQLNSPENLKLLETKSDF-- 99 Query: 119 AYFAELDYVSTAN-----NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ + N P + N + + F N I + + Sbjct: 100 VYQAQSGLIGKDGLDNSINKIRPLYSAKKNFFELGHNEKELRVPITFIAKNGITYIKNFI 159 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y ++ + N S ++ + G++ + + F +Q G Sbjct: 160 LKPGKYNVEVEYDINNLSNKKLELNIFGQLKQTVKLPKNRDIYSGNFALQTFRGAAYSSS 219 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE-TSFHSQFKYLSDGHAR 284 D + K+ +I + + W+ + +Y+ ++P +S + + D Sbjct: 220 DAKYEKYKFDNIANHEHLHIITHHGWIAMLQQYFVVAWVPDTNISSSNIIYTSYLDNDGI 279 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + ++ I I + L+ G ++ + L P ++ +D+G+ +F+++ Sbjct: 280 AIIGYKSSLINIPSNSRYIIKSKLWIGPEKQQEM-----ALVAPNLDLTVDYGFLWFLSQ 334 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+S +N +GN+G +I+L T +K + +PL K QY S + M+ +QPKI+EL++ F Sbjct: 335 PLFKLLSTIHNFIGNWGFSIILITFMMKAITYPLTKAQYTSMSKMRELQPKINELKKNFG 394 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + K ++ LYK INPL GC P+ +Q+P+F ++Y ++ S+E+RHAPF WIKD Sbjct: 395 HDK-QRMSKEIMALYKKEKINPLGGCLPVFIQMPIFLSLYYMLIGSVELRHAPFLFWIKD 453 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+ DP + PI M L+MF + S +D Q I+++M Sbjct: 454 LSDQDPYYVL-------------------PIFMGLTMFFIQRTSSNNISDPFQQKIMHFM 494 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P +F FP+GL++Y+ SN+++I+QQ I Sbjct: 495 PFIFTVFFLWFPSGLVLYYIVSNLVTIIQQKYI 527 >gi|1369897|dbj|BAA12844.1| inner membrane protein [Buchnera aphidicola] gi|2827010|gb|AAC38102.1| 60-kDa protein [Buchnera aphidicola] Length = 536 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 134/573 (23%), Positives = 257/573 (44%), Gaps = 64/573 (11%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N+F+ L S ++ AWQ Q++K+ + + + + + Sbjct: 1 MELQRNFFIFAFLFVSFLLWQAWQ-----------------SQSLKKNKKNEETNSFFHL 43 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + ++ +KN L IN+ G ++ +L Y ++S + L + S+ Sbjct: 44 NHKKE---DKNQIIIKNDVLRLVINMYGGDIEEASLLDYKTQLNSPENLKLLETKSDF-- 98 Query: 119 AYFAELDYVSTAN-----NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ + N P + N + + F N I + + Sbjct: 99 VYQAQSGLIGKDGLDNSINKIRPLYSAKKNFFELGHNEKELRVPITFIAKNGITYIKNFI 158 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y ++ + N S ++ + G++ + + F +Q G Sbjct: 159 LKPGKYNVEVEYDINNLSNKKLELNIFGQLKQTVKLPKNRDIYSGNFALQTFRGAAYSSS 218 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE-TSFHSQFKYLSDGHAR 284 D + K+ +I + + W+ + +Y+ ++P +S + + D Sbjct: 219 DAKYEKYKFDNIANHEHLHIITHHGWIAMLQQYFVVAWVPDTNISSSNIIYTSYLDNDGI 278 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + ++ I I + L+ G ++ + L P ++ +D+G+ +F+++ Sbjct: 279 AIIGYKSSLINIPSNSRYIIKSKLWIGPEKQQEM-----ALVAPNLDLTVDYGFLWFLSQ 333 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+S +N +GN+G +I+L T +K + +P+ K QY S + M+ +QPKI+EL++ F Sbjct: 334 PLFKLLSTIHNFIGNWGFSIILITFMMKAITYPVTKAQYTSMSKMRELQPKINELKKNFG 393 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + K ++ LYK INPL GC P+ +Q+P+F ++Y ++ S+E+RHAPF WIKD Sbjct: 394 HDK-QRMSKEIMALYKKEKINPLGGCLPVFIQMPIFLSLYYMLIGSVELRHAPFLFWIKD 452 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+ DP + PI M L+MF + S +D Q I+++M Sbjct: 453 LSDQDPYYVL-------------------PIFMGLTMFFIQRTSSNNISDPFQQKIMHFM 493 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P +F FP+GL++Y+ SN+++I+QQ I Sbjct: 494 PFIFTVFFLWFPSGLVLYYIVSNLVTIIQQKYI 526 >gi|148266439|ref|YP_001233145.1| 60 kDa inner membrane insertion protein [Geobacter uraniireducens Rf4] gi|189036352|sp|A5G9V4|OXAA_GEOUR RecName: Full=Inner membrane protein oxaA gi|146399939|gb|ABQ28572.1| protein translocase subunit yidC [Geobacter uraniireducens Rf4] Length = 528 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 152/559 (27%), Positives = 260/559 (46%), Gaps = 36/559 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME +A+ LS+ ++YA+ + P+ +++ Q+ P Q +S + VL Sbjct: 1 ME--KRVVIAVILSIAVLYAYSMIFPPPQKKDVVKPGPVPQSQTAPVQAVSSTS-VLPAI 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Q + ++ + +GA L L+ Y V L++ + Sbjct: 58 MQQGNVSVRDLVVETDLFTAVFSTRGAGLKKLVLKRYKETSGPGGREVVLVNEEAAEKFS 117 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YL 179 + NS + ++G ++ + I+F+++ + Y Sbjct: 118 LLTEGKSFGIEPTVVYNSISNGLKLAGNE---KGTLEFTSTSPTGIVFKKSYIFTGNDYR 174 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + + NNS + S I ++ + + L D + +K +D K Sbjct: 175 IDLHQELLNNSPTKFDGSLH-LIGNNRIEAKPGDGRFEVYGPVTLADDKINTEKVADFSK 233 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + ++ W +DKY+ + + + + + + Q S+ + + PG Sbjct: 234 GP-KQYDKNILWTAFADKYFMNAIL--SDNNSIAAVRLAKVNTNYLQDDVSSPPLALNPG 290 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 +S +F G K+ + R E ID+GWF +AKP+ + +FY+ N Sbjct: 291 QSAAVNYRIFYGPKDLEILKGQGS-----RLEEAIDFGWFSALAKPLLRTLKFFYSYTHN 345 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +GIAI++ TV +KLLFFPL K Y S M+ +QPK+ EL+EKFK + +A++ LY Sbjct: 346 YGIAIIIITVILKLLFFPLTHKSYKSMKEMQKLQPKMAELKEKFKNDRD-AMNRAVMDLY 404 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 KTH +NP+ GC P+++QIPVFFA+YK + S+E+RHAPF WI DL+A DP + Sbjct: 405 KTHKVNPMGGCLPMIVQIPVFFALYKALMFSIELRHAPFMLWIMDLSAKDPYYVT----- 459 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 P+IM ++MF+Q KM+P D QA ++ +PVVF F +FP+GL+ Sbjct: 460 --------------PVIMGVTMFVQQKMTPSNMDPVQAKMMLALPVVFTFMFLNFPSGLV 505 Query: 540 IYWSWSNVISIVQQAVIMK 558 +YW +N+++I QQ I K Sbjct: 506 LYWLVNNILTIAQQTYINK 524 >gi|163751385|ref|ZP_02158610.1| inner membrane protein, 60 kDa [Shewanella benthica KT99] gi|161328688|gb|EDP99836.1| inner membrane protein, 60 kDa [Shewanella benthica KT99] Length = 437 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 123/459 (26%), Positives = 213/459 (46%), Gaps = 42/459 (9%) Query: 110 LLSPSNTKNAYFAELDYVSTAN-------NIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 +L Y A+ + +++ + + +G+ T + L + Sbjct: 1 MLLEQTQDINYIAQSGLIGRDGIDSSVKGRAHFDSASRDYTMAAGQE---TLEVALTYVA 57 Query: 163 ANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQEGF 220 N + + + + + N + Q++ G+I ++ ++ G Sbjct: 58 DNGANYTKMFIFHRGKFNIDVDYVIDNTTDKQLQVQMYGQIKHSIKESESSMMMPTYRGA 117 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 D + + D+ ++ N W + Y+ S +IP + + Sbjct: 118 AFSTADIRYEKYSFDDMADKNLDN-KTLGGWAAMLQHYFVSAWIPPADDQNIIFSSLSAG 176 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G A F I PG + T + G K+ + L +++D+G+ + Sbjct: 177 GQAN--IGFRGAIYDIAPGATQTIKAQFYVGPKDQKELSAISDSLN-----LVVDYGFLW 229 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 +IA P+ L+ +FY++VGN+G AI+L T+ V+ + FPL K QY S A M+++QPK+ E++ Sbjct: 230 WIAVPISKLLMFFYSIVGNWGGAIILITLTVRGMLFPLTKAQYTSMAKMRSLQPKLAEMK 289 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF Sbjct: 290 ERFGDD-RQKMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLMESVELRHAPFML 348 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAM 518 WI DL+ DP + P++M +SMF+ +M P P D Q Sbjct: 349 WIIDLSVQDPYYV-------------------MPVLMGISMFVMQRMQPMAPTMDPMQQK 389 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ WMPVVF FPAGL++YW N+++I QQ +I Sbjct: 390 MMQWMPVVFTVFFLWFPAGLVLYWLVGNIVAITQQKIIY 428 >gi|220905229|ref|YP_002480541.1| YidC translocase/secretase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869528|gb|ACL49863.1| YidC translocase/secretase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 548 Score = 375 bits (962), Expect = e-101, Method: Composition-based stats. Identities = 148/571 (25%), Positives = 254/571 (44%), Gaps = 37/571 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY----PRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N +AI L +I++ W Y R + + ++ Q Q A Sbjct: 1 MQDGKNLLIAIVLCLIVIVGWGYLAEYMGWATRPAPVAQQSQDQQAAHPQPQAQTQAAPA 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + + + P + G L+ Y + ++++SP V ++ P Sbjct: 61 QASLPVFTPAPGRDLTVDTPLYEAVVYSGGGALRSFKLKKYQVGLAADSPQVNMVDP--- 117 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVFKNA-NNILFERTI 172 K+A A L V N + S W++ +G+ L L +N+ R + Sbjct: 118 KSAQVAPLGLVI---NSQPSWSTGQWSMDTGENGLALEQGQQGTLRLVGEVDNLRVVREM 174 Query: 173 SLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 + +YL + V N + + A + + +A D SL E Sbjct: 175 TFSATNYLIREKIRVVNQTQQARSVRVSYTVAADASNAAGDRYDAMR--VAWDNDGSLKE 232 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + + +S+ W G Y+ + +P + + + Y+ Sbjct: 233 ESSASTLESTGVQAVGKIYWAGAMSTYFLAAVLPGDVNNVTVKGVMQQN---VYRTAVEE 289 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 E + PG+ + + G K + P+ +D G+F+ IAK + L+ Sbjct: 290 QETLLGPGQEKELSVSYWVGPKVRSELQAVS-----PQLAKSVDLGFFHIIAKGLLWLLE 344 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 +F+ V N+G+AI+L TV +K F+PL K Y S MK +QP + E+REKFK + Q + Sbjct: 345 FFHKYVHNWGLAIILLTVLIKAAFWPLTAKSYASMEKMKKLQPHMMEIREKFKDNKEQ-M 403 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 K ++ LYKT+ +NP +GC PIL+Q+PVFF +Y+ + S+E+RHAP +I L D Sbjct: 404 NKEVMALYKTYGVNPASGCVPILIQLPVFFGLYQALLTSIELRHAP---FITYLPGTDIL 460 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 + L P Y+ P+IM L+MF+Q +MSPP D Q I+ ++P++F Sbjct: 461 WLADLSTKDPLYIT--------PVIMGLTMFLQQRMSPPATDPTQQKIMMFLPLIFTALF 512 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +FP+GL++YW +NV+SI QQ ++++ A Sbjct: 513 LNFPSGLVLYWLVNNVLSIAQQQMMIRKFKA 543 >gi|258406259|ref|YP_003199001.1| membrane protein insertase, YidC/Oxa1 family [Desulfohalobium retbaense DSM 5692] gi|257798486|gb|ACV69423.1| membrane protein insertase, YidC/Oxa1 family [Desulfohalobium retbaense DSM 5692] Length = 550 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 151/581 (25%), Positives = 260/581 (44%), Gaps = 55/581 (9%) Query: 1 MERN-WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL-- 57 M+ N VA+ LS I++ W + + +N+ N + P ++S + V Sbjct: 1 MDDNTKRVIVAVVLSFIVIVGWNFLFPPQQPPTQSNQAANQTQQETPTVAEDSSSQVPGA 60 Query: 58 -------IDDRAQAL---------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 + RAQ RV ++ P +IN G + L L+ Y + Sbjct: 61 SQTGDGVVAGRAQQSLSGSTYSPEGSGKRVTVETPLYKATINAAGGVLEHLVLKQYQEAI 120 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI-LTPTTPIKLVF 160 + + V L++ + A + + S W L + L L Sbjct: 121 NPGAKNVDLITRGTVQK---APMGLIWQQ---RPTWSEADWELQGNDLQLGQGESGSLTL 174 Query: 161 KNA-NNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 + + ERT+ E YL V N + + + + + + Sbjct: 175 VGTIDGVRLERTLHFSAETYLIDETLNVANARDHSLTGTVSFTMASEQLAEESRYNRTE- 233 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + + L ++ +D E + E+ SW GI+ Y+ +P+ Sbjct: 234 ---LIYFNGGLNKESDTD-ELQIGIHPAETVSWGGIASNYFLLAAVPTSGN-----MDLR 284 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 +++ + P +S + + G KE + ++L I +GW Sbjct: 285 GKYEDEIYRVALGSQVAVAPEQSAELSCSYYVGPKESEQLAQAPQNLLA-----AIQYGW 339 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F FIAKP+ ++ +FY+ VGN+G+AI+L T+ +K++F+PL++K Y S MK +QP + + Sbjct: 340 FDFIAKPLIKVLKFFYSYVGNYGVAIILLTILIKIVFWPLSQKSYKSMEKMKKLQPMMTQ 399 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+EK+ Q L + M++LYKT+ +NP GC P+LLQIPVF A+Y+ + ++E+RHA F Sbjct: 400 LKEKYGDD-RQKLNEEMMRLYKTYKVNPAGGCLPMLLQIPVFIALYQALLGAIELRHAAF 458 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + D + L P Y+ PI+M +MF+Q KM+P P D QA Sbjct: 459 ITHVP---FTDIIWLADLSAKDPLYVT--------PIVMGATMFLQQKMTPTPGDSTQAK 507 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ +MP++F F SFPAGL++YW +NV+SI QQ ++ + Sbjct: 508 VMMFMPLIFTFIFLSFPAGLVVYWLVNNVLSIAQQWMLTRK 548 >gi|78224744|ref|YP_386491.1| protein translocase subunit yidC [Geobacter metallireducens GS-15] gi|123570635|sp|Q39PQ8|OXAA_GEOMG RecName: Full=Inner membrane protein oxaA gi|78195999|gb|ABB33766.1| protein translocase subunit yidC [Geobacter metallireducens GS-15] Length = 536 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 151/567 (26%), Positives = 256/567 (45%), Gaps = 40/567 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME +A+ LS++ Y + + P+ E + T QP S AAV Sbjct: 1 ME--KRALIAVILSIVFFYGYSALFPPPKKEAPAPSAQQAVTGSQPGAPQASVAAVPAPS 58 Query: 61 RAQAL---SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN-T 116 A + + ++ P + +G L L+ Y VTL+ + + Sbjct: 59 PVPAAAVKAQQKEIAVETPDYTAVFSTQGGSLTRLVLKKYRETADLTGKHVTLVDERDPS 118 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 + + +S + +G+ + + + + + + Sbjct: 119 AYTLSTRAAGIGLDPSALFVSSADSLTVEAGEE---KKELAFTWISPAGVTVRKIYTFQG 175 Query: 177 -HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 +Y +V N+ ++ + +M + ++ L E+K Sbjct: 176 GNYGIDMVYQTANSGTARV-GAAFQTVMTYPAVPRVKESRLETFGPVTFAQDKLTEEKVK 234 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D+ S + + W G +DKY+ S + + + + G + +A E + Sbjct: 235 DLVGQGKS--YSAPLWSGFADKYFLSAVVGQGGSIATAAVRSTPRG--MLEDTITAPETS 290 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG+S + L+ G K+ + L E ID GWF +AKP+ + +FY Sbjct: 291 LNPGESKSVAYRLYFGPKDLDILKAQGNSL-----ERAIDLGWFAMLAKPLLHSLKFFYK 345 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 V N+GIAI++ TV +K++F+PL Y S M+ +QPK+ E+REK+K + KA+ Sbjct: 346 YVHNYGIAIIIITVILKIIFYPLTHSSYKSMKQMQKLQPKMQEVREKYKNDRD-AMNKAI 404 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LY+TH +NP+ GC P+L+QIPVFFA+YK + S+E+RHAPF WI+DLA DP + Sbjct: 405 MELYQTHKVNPVGGCLPMLVQIPVFFALYKALMFSIELRHAPFMLWIQDLAGKDPYYVT- 463 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 PIIM ++M IQ KM+P D Q ++ +PVVF F +FP Sbjct: 464 ------------------PIIMGITMVIQQKMTPSQMDPMQQKMMMALPVVFTFMFLNFP 505 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGA 562 +GL++YW +NV++I+QQ+ I K A Sbjct: 506 SGLVLYWLVNNVLTIIQQSYINKSIAA 532 >gi|332702558|ref|ZP_08422646.1| Membrane protein oxaA [Desulfovibrio africanus str. Walvis Bay] gi|332552707|gb|EGJ49751.1| Membrane protein oxaA [Desulfovibrio africanus str. Walvis Bay] Length = 530 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 139/569 (24%), Positives = 237/569 (41%), Gaps = 53/569 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N +A LS+ I+ W F+ + E Q A+ A Sbjct: 2 ENKRLLLATVLSLAILVGWSYFFAPEQPVEQAQAPAPQAQPAPQPQSAQPLEAIP--GAA 59 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 + V ++ P + G L+ Y + + + L+S + A Sbjct: 60 FTSASGKIVTVETPLYTAKLFADGGVLQHFILKNYKTGIEPGAANIDLVSRQAQEK---A 116 Query: 123 ELDYVSTANNIELPNSNTVWNLISGK-ILTPTTPIKLVFK-NANNILFERTISLD-EHYL 179 L + + W+ L+ +L F + RT++ ++Y Sbjct: 117 PLGLIWNGAPT---WNRGSWSFEGSDLTLSDDQTGQLSFVCDIAGARLVRTLTFRADNYT 173 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV-EQKYSDIE 238 + V N + Q+ + +++ + L + L E D+ Sbjct: 174 VQDSVRVANQTQAQLSGRLAFTLAGTTLSAEGDSYNPTR--VEYLAEGGLESESDTDDLA 231 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 K F W G+ Y+ P E + Y+ ++I + P Sbjct: 232 KG--LTFTGQVRWGGLLSNYFLLAIAPQTEPATFKALYS----DQLYRIAVEKSDILLDP 285 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G + F G K + +L+ I +GWF IAKP+ + + + Y+ Sbjct: 286 GSEASVAADYFLGPKVRELLAAAPAELS-----RSISYGWFSVIAKPLVLALDWLYSFTH 340 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+L TVF+KL+F+PL++K Y S MK +QP + ++REK Q + + M+QL Sbjct: 341 NWGVAIILLTVFIKLVFWPLSQKSYKSMNQMKKLQPMMAKIREKHADDRVQ-MNQEMMQL 399 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA--------PFWGWIKDLAAADP 470 Y+T+ +NP+ GC P++LQIPVF +Y + ++E+RHA + W+ DL+A DP Sbjct: 400 YRTYKVNPMGGCLPMVLQIPVFLGLYNALMGAIELRHAAFIEHLPFTNYIWLADLSAKDP 459 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I P+IM +MF+Q K++P D Q I+ +MP++F F Sbjct: 460 FYIT-------------------PLIMGATMFLQQKLTPAAGDPTQQKIMMFMPLIFTFM 500 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +FPAGL++YW +NV+SI QQ +M+ Sbjct: 501 FLNFPAGLVLYWLVNNVLSIAQQWWLMRK 529 >gi|218885990|ref|YP_002435311.1| hypothetical protein DvMF_0888 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|259515682|sp|B8DP11|OXAA_DESVM RecName: Full=Inner membrane protein oxaA gi|218756944|gb|ACL07843.1| 60 kDa inner membrane insertion protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 539 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 154/576 (26%), Positives = 257/576 (44%), Gaps = 58/576 (10%) Query: 3 RNWNYFVAIALSVIIVYAWQN------FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 + +AIALS +++ W + P + E + P + A Sbjct: 2 ESKRAIIAIALSFVVLVGWSYLADHMGWNGQPAPQAQQEETAPSASQAAPQSASQAAAPA 61 Query: 57 LIDDRAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + L + R V + P ++ G +L Y +++ +P V ++ + Sbjct: 62 PRAETPVFLPSAGREVTVVTPLYKAVLHSGGGVLKHFSLTRYRTAITAGAPAVDMV---D 118 Query: 116 TKNAYFAELDYVSTANNIELPNSNT-VWNLISGKI-LTPTTPIKLVFKNA-NNILFERTI 172 T + + L + P+ NT W+ G + L L F + + R + Sbjct: 119 TASTVMSPLGLLINGQ----PSWNTGQWSFDGGDLSLGAGQSGVLTFTGEVDGVRVVREL 174 Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRG--RIMRHKPQTATNTFGVQEG-----FIAVL 224 + + YL +++R +P R +R T G +A L Sbjct: 175 TFSADTYLI----------SEKVRLAPLADARTVRLGFTVGTGNLSPNGGQYDHTRVAWL 224 Query: 225 GDKSLVEQ-KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 D S E+ SD+EK + + SW + Y+ P T + K Sbjct: 225 HDGSFSEKTSASDLEKGVLE--TGALSWGAVMSNYFLVAAAPVDTTGVTLKGKLQ---EG 279 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ +++I G T + G K+ + LA I+ GWF IA Sbjct: 280 VYRVAMERGDVSIPAGGETTVACNYWFGPKDRGLLKEAPNQLA-----EAINLGWFSIIA 334 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +P+ ++ +F+ VGN+G+AI+L TV +KL+F+PL+ K Y S MK +QP + +LREK Sbjct: 335 RPLVDMLEFFHKYVGNYGVAIILLTVVIKLVFWPLSHKSYKSMEQMKKLQPMLQKLREKH 394 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 + + + M++LYKT+ +NP GC P+L+QIPVFF +Y+ + ++E+RHA F I Sbjct: 395 GDD-REKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHASF---IT 450 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 L D + L P+Y+ PI+M +M +Q K++P P D QA I+ +M Sbjct: 451 HLPFTDMVWLADLSAKDPYYIT--------PIVMGATMLLQQKLTPAPGDPTQAKIMMFM 502 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 PVVF F SFP+GL++YW +NV+SI QQ +++ Sbjct: 503 PVVFTFMFLSFPSGLVVYWLCNNVLSIAQQWWMLRK 538 >gi|15839369|ref|NP_300057.1| putative inner membrane protein translocase component YidC [Xylella fastidiosa 9a5c] gi|38503220|sp|Q9P9U1|OXAA_XYLFA RecName: Full=Inner membrane protein oxaA gi|9108026|gb|AAF85565.1|AE004083_4 60kDa inner-membrane protein [Xylella fastidiosa 9a5c] Length = 565 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 129/584 (22%), Positives = 253/584 (43%), Gaps = 56/584 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA-AVL 57 M + + + ++ ++ W + ++ + V A AV Sbjct: 1 MNQTRVLLIFSWLTVATLLWMDWGKNKNETLEISASQNLGVDSNLELEHAVPQINAGAVP 60 Query: 58 IDDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + +Q ++++P+V + K L ++ G +L + + + LL+ Sbjct: 61 VQKDSQLIAVAPKVPVINVKTDVLQLKLD--GFSVLAADLLRFPQSKDRGAKPIKLLT-D 117 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISG-----KILTPTTPIKLVFKNANNILFE 169 + Y A +VS +N+ +PN +T G + V+ AN + Sbjct: 118 DPNYPYSATTGWVSQSNSP-VPNLSTFLPEQPGVSYKLANDQDRLVVPFVWTAANGVSIR 176 Query: 170 RTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-------HKPQTATNTFGVQEGFI 221 RT + + Y I D + N ++ R ++ T ++F G + Sbjct: 177 RTFTFERGRYAILIRDEIRNGGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFS-FNGAV 235 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 + + D N W+ + ++ + +IP K+ + L+ Sbjct: 236 WYSEKGGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQ---ASLYLLAQN 292 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF-- 339 +R A+ T+ PG+S TT L+ G K I + + ++D+ F Sbjct: 293 GSRDIAELRGPAFTVAPGQSTTTEARLWVGPKLVEQITKEH----VKGLDRVVDYSRFQL 348 Query: 340 -YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 I + +F ++S+ +L+ N+G AI+ V +++ +PL+ QY S A M+ QP++ + Sbjct: 349 MALIGQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSAAQYKSAAKMRKFQPRLQQ 408 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+E++ + Q Q+AM++LYK INP+ GC+PIL+Q+P+FFA+Y V+ S+E+R AP+ Sbjct: 409 LKERYGED-RQKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPW 467 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQ 516 GWI+DL DP I P++ + M+ K++P P D Sbjct: 468 LGWIQDLTTRDPYFIL-------------------PLLNIVIMWATQKLTPTPAGMDPIA 508 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ MP++F ++ P+GL +YW + ++++ Q +++ H Sbjct: 509 GKMMQVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIRQH 552 >gi|218781967|ref|YP_002433285.1| YidC translocase/secretase [Desulfatibacillum alkenivorans AK-01] gi|218763351|gb|ACL05817.1| YidC translocase/secretase [Desulfatibacillum alkenivorans AK-01] Length = 559 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 157/574 (27%), Positives = 270/574 (47%), Gaps = 37/574 (6%) Query: 3 RNWNYFVAIALSVIIVYAWQNFY-VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + +A+ALS+++ A+Q F+ P E E + I V+Q + AA I Sbjct: 2 EQFRLILAVALSLMVFIAYQYFFGPKPPQGETPVESQEIAQVQQSTEAHAQEAAAAITPA 61 Query: 62 AQALSM----------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + + + + P KGA DL L+ Y + +S ++ Sbjct: 62 PAAAPIPEIAASPGRPARDITVDTPLYHAVFTEKGAGLSDLTLKEYWETQAKDSAPKRVV 121 Query: 112 S--PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 P + + +T + + + + I+ Sbjct: 122 DLPPGGATLLTTMARGSLGNLESAVFSAQST----EDLNVQEQPQSLIFTYTAPSGIIVT 177 Query: 170 RTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT----FGVQEGFIAVL 224 +T + + Y +V NN++ I + + + ++ + V G +A + Sbjct: 178 KTYTFQPDSYAMDCQLSVANNTLGPINDNLSVILNNYYTPSSKPSDKSDRIVFSGPMAFV 237 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 S+ E K S EK W+ ++ +Y+ S + + + L+ + Sbjct: 238 N-NSMEEFKVS--EKKPEKTIQGPTGWVALTWRYFMSAVVFDQTQEGVIKAS-LNSANNV 293 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Q F+ + I PG++ TT+ F G K+ ++ E +D+G+F+ IAK Sbjct: 294 AQTLFTGKPMAIPPGQTFTTSYKAFFGPKQGDILNK-------AGLENALDFGFFHVIAK 346 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P +LM+ +N V N+G+ I+L T+ +K++ +PL K Y S MK +QP + ELREK+K Sbjct: 347 PCLLLMNIMHNYVPNYGVVIILLTLLIKIVLWPLGSKSYRSMEKMKKLQPLMQELREKYK 406 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + + + LYKT +NP+ GCWP+L+QIP+F A YK++ +++E+RH+PF WI D Sbjct: 407 DDK-QKMNQEVFALYKTFKVNPMGGCWPMLIQIPIFIAFYKMLYVAIELRHSPFIWWITD 465 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A D +F L +PF + + + +IM SM +Q KMSPPP D QA ++ +P Sbjct: 466 LSAPD--RLFHLPFPVPF-MAEPYGIPVLTLIMGASMLLQQKMSPPPGDPTQAKMMMLLP 522 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +VF+F +FP+GL++YW +NV+SI QQ I K Sbjct: 523 LVFLFIFINFPSGLVLYWLVNNVVSIAQQYYIGK 556 >gi|285019933|ref|YP_003377644.1| inner-membrane protein oxaa [Xanthomonas albilineans GPE PC73] gi|283475151|emb|CBA17650.1| probable inner-membrane protein oxaa [Xanthomonas albilineans] Length = 575 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 129/592 (21%), Positives = 246/592 (41%), Gaps = 62/592 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + + L V + W + + + A + Sbjct: 1 MNQTRLFLIFAWLMVAALL-WMEWSKEHSPAASATSSAATTALPPASATSAGTAGMPPIP 59 Query: 61 RAQALSMSP----------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 RA RV + L +++ G+ D +L Y + Sbjct: 60 RANVPGAGSGAGTTAETAAPAAGATRVTVTTDVLRLTMD--GSSVLDADLLMYPQTQQPS 117 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVF 160 SP V LL+ + + Y A ++ N+ + + + + V+ Sbjct: 118 SPPVQLLT-EDALHPYNAISGWIGERNSPSPSLGGFRPEQPGKEYVLAKGQDSLEVPFVW 176 Query: 161 KNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTF 214 + I R +L HY ++ D + N+ + ++ R + T ++F Sbjct: 177 NGPSGISIRRVYTLQPGHYAVQVRDEIVNHGSKPWQGYVFRKLSRVPTIVSRGMTNPDSF 236 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 G + + D N S W+ + ++ + +IP + Sbjct: 237 S-FNGATWFSPQDGYQRRAFKDYLADGPLNQTISGGWIAVLQHHFFTSWIPQADQQ---S 292 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 LS+ + + ++PG +T L+ G K I + + + ++ Sbjct: 293 VYLLSNEGPLHVIEARGPAFVVVPGGHASTEARLWVGPKLVNQIAKEQ----VKGLDRVV 348 Query: 335 DWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 D+ F + + +F ++S+ + L+GN+G +I+ + +KLL +PL+ QY S+A ++ Sbjct: 349 DYSRFSLMALLGQGLFWILSHLHALLGNWGWSIVGLVLLLKLLLYPLSSAQYKSSAKLRK 408 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 QP++ +L+E++ Q LQ AM++LYK INP+ GC P+L+Q+P+FFA+Y V+ S+ Sbjct: 409 FQPRMQQLKERYGDDK-QKLQTAMMELYKKEKINPMGGCLPVLIQMPIFFALYWVLVESV 467 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+R AP++ WI+DL A DP I P+I + M + K++P P Sbjct: 468 ELRQAPWFAWIQDLTARDPYFIL-------------------PVINAAVMLLTQKLTPTP 508 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 D QA ++ +MP+VF ++ P+GL++YW + + ++QQ + K HG Sbjct: 509 GMDPAQAKMMQFMPLVFGVMMAFVPSGLVLYWVTNGSLGLLQQWWMNKRHGE 560 >gi|302341714|ref|YP_003806243.1| membrane protein insertase, YidC/Oxa1 family [Desulfarculus baarsii DSM 2075] gi|301638327|gb|ADK83649.1| membrane protein insertase, YidC/Oxa1 family [Desulfarculus baarsii DSM 2075] Length = 546 Score = 372 bits (954), Expect = e-100, Method: Composition-based stats. Identities = 151/567 (26%), Positives = 267/567 (47%), Gaps = 27/567 (4%) Query: 1 ME-RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ +A+ +SV +++AW F + P ++ Q + AA+ Sbjct: 1 MDSDAKRVVLALVISVAVLFAWTTFVMPPEPKQAPAPTATPAQTAQATAAAPAPAAMPAP 60 Query: 60 DRAQALSMS-PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + + V ++ P + + + KG + L+ Y + LL ++++ Sbjct: 61 APAPQVMPAYQDVVVETPLMRATFSTKGGALRKVVLKDYFAKPGQQGGEMVLLDLADSE- 119 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EH 177 Y L + L + ++ + ++A + +T + + Sbjct: 120 PY--ALGLALVKLDPHLAQRPFQASAQRLEVTAAGQSLSFSAESA-GVRVVKTYTFRPDS 176 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 + F++ ++ N + +I +P + + + N++ V+ SL E + D+ Sbjct: 177 HAFQLSVSLQNKNAGRIELTPELILAEYVSKMHANSYAFT--GSQVVAGGSLEELDHGDL 234 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR---YQAKFSANEI 294 E S + L +S Y+ P + +Q K + G A A + + Sbjct: 235 EDSPV--VAGPIDCLTLSIPYFMGAVAPESWPAV-AQGKPSARGWADAKLMTATLVSPLL 291 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 + G+S+ ++ G KE + LA M +D+GWF IAKPM +++F+ Sbjct: 292 PMDAGQSLDLKFLVYYGPKELHVLEPLGHSLA-----MAVDFGWFDVIAKPMLAGLNFFH 346 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + V N+G+AI++ TV +KLLF+PL K Y S M+ +QP+I ++REK+K Q + + Sbjct: 347 DYVNNYGVAIIIITVLIKLLFWPLQNKSYESMKKMQKLQPQIAKIREKYKDDK-QEMNQQ 405 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 ++QLYKT+ +NPL GC P+L Q+PVF A YKV+ S+E+RHAPFW WI DL+A D Sbjct: 406 VMQLYKTYKVNPLGGCLPMLAQVPVFIAFYKVLGSSIELRHAPFWLWINDLSAPDR---L 462 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + +PF G + + ++M SMFI KMSP D Q ++ MPV+F +F Sbjct: 463 PIGFEIPFVGDG---IPVLTLLMGASMFITQKMSPATGDPTQQKMMMLMPVIFTVMFINF 519 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHG 561 P+GL++YW N++ I QQ ++ + Sbjct: 520 PSGLVLYWFVQNLLGIGQQWLVNRRKD 546 >gi|322421977|ref|YP_004201200.1| membrane protein insertase, YidC/Oxa1 family [Geobacter sp. M18] gi|320128364|gb|ADW15924.1| membrane protein insertase, YidC/Oxa1 family [Geobacter sp. M18] Length = 537 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 152/571 (26%), Positives = 264/571 (46%), Gaps = 51/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME +AI LS+ I+YA+ +++P + + Q V V + A Sbjct: 1 ME--KRLVIAILLSIGILYAYS--FIFPPAKPVPPAGGAKQGVVSSATVAPALQAAATAA 56 Query: 61 RAQAL---------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + + V + + +GA L+ Y + L+ Sbjct: 57 APSAAAPVAIPPQATTAKDVTVDTDLYSAVFSSQGAGLKKFVLKKYKDVAGPKGQDIVLV 116 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI---LTPTTPIKLVFKNANNILF 168 + + ++ + L N ++N+ + ++ ++ ++F Sbjct: 117 NETAANR-----FGLLTDSREFGL-NPTALYNVSANELKLSNGSKGTLEFTTTTPQGVVF 170 Query: 169 ERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 ++ S + Y + + V N+ Q+ + + + L + Sbjct: 171 KKIYSFSGDAYRIGLTEQVQNSGAAQVAGALHLLQNSRVIDQKAGGGRYEVYGPSTLTED 230 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 ++ +K +++ K+ + + +S +W +DKY+ I K + +Q G Sbjct: 231 AVKSEKLNNLLKAPV-QYDKSIAWSSFADKYFTESVIAEKGSI--AQLHMTRPGTDAMLR 287 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + +T+ PG++ + + L+ G K+ + L E +ID+GWF IAKP+ Sbjct: 288 DIVSPAVTVAPGQTASVSYALYYGPKDLDILKAQGSSL-----EKVIDYGWFAPIAKPLV 342 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 + + + Y GN+GIAI++ T +KL+FFPL K Y S +M+ +QPK+ L+EK+K Sbjct: 343 VFLKFLYKYTGNYGIAIIIITCILKLVFFPLTHKSYKSMKDMQKLQPKMTALKEKYKNDR 402 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + KA+++LYKTH +NPL GC P+L+QIPVFF +Y+ + S+E+RHAPF+ WI DL+A Sbjct: 403 D-AMNKAVMELYKTHKVNPLGGCLPMLVQIPVFFGLYRALMYSIELRHAPFYLWITDLSA 461 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP + PIIM +MFIQ KM+P D QA ++ +PVVF Sbjct: 462 KDPYYVT-------------------PIIMGATMFIQQKMTPSNMDPVQAKMMLMLPVVF 502 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F +FP+GL+IYW +NV++I QQ I K Sbjct: 503 TFMFLNFPSGLVIYWLVNNVLTIAQQMYINK 533 >gi|71901965|ref|ZP_00684016.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1] gi|71728270|gb|EAO30450.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1] Length = 565 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 127/583 (21%), Positives = 253/583 (43%), Gaps = 54/583 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA-AVL 57 M + + + ++ ++ W ++ ++ + V A AV Sbjct: 1 MNQTRVLLIFSWLTVATLLWMDWGKNKNETLEISASHNLGVDSNLELEHAVPQINAGAVP 60 Query: 58 IDDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + +Q ++ +P+V + L ++ G +L + + + LL+ Sbjct: 61 LQKDSQLIAAAPKVPVINVTTDVLQLKLD--GFSILAADLLRFPQSKDRGAKPIKLLT-D 117 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNL--ISGKILTPTTP--IKLVFKNANNILFER 170 + Y A +VS +N+ S + +S K+ + V+ AN + R Sbjct: 118 DPNYPYSATTGWVSQSNSPVPNLSTFLPEQPDVSYKLANDQNRLVVPFVWTAANGVSIRR 177 Query: 171 TISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-------HKPQTATNTFGVQEGFIA 222 T + + Y I D + N+ ++ R ++ T ++F G + Sbjct: 178 TFTFERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFS-FNGAVW 236 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + D N W+ + ++ + +IP K+ + L+ Sbjct: 237 YSEKGGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQ---ASLYLLAQNG 293 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF--- 339 +R A+ T+ PG+S TT L+ G K I + + ++D+ F Sbjct: 294 SRDIAELRGPAFTVAPGQSTTTEARLWVGPKLVEQITKEH----VKGLDRVVDYSRFQLM 349 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 I + +F ++S+ +L+ N+G AI+ V +++ +PL+ QY S A M+ QP++ +L Sbjct: 350 ALIGQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSAAQYKSAAKMRKFQPRLQQL 409 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E++ + Q Q+AM++LYK INP+ GC+PIL+Q+P+FFA+Y V+ S+E+R AP+ Sbjct: 410 KERYGED-RQKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWL 468 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQA 517 GWI+DL DP I P++ + M+ K++P P D Sbjct: 469 GWIQDLTTRDPYFIL-------------------PLLNIVIMWATQKLTPTPAGMDPIAG 509 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ MP++F ++ P+GL +YW + ++++ Q +++ H Sbjct: 510 KMMQVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIRQH 552 >gi|28199977|ref|NP_780291.1| putative inner membrane protein translocase component YidC [Xylella fastidiosa Temecula1] gi|182682731|ref|YP_001830891.1| putative inner membrane protein translocase component YidC [Xylella fastidiosa M23] gi|38502965|sp|Q879S3|OXAA_XYLFT RecName: Full=Inner membrane protein oxaA gi|254778174|sp|B2IAR7|OXAA_XYLF2 RecName: Full=Inner membrane protein oxaA gi|28058108|gb|AAO29940.1| 60 kDa inner-membrane protein [Xylella fastidiosa Temecula1] gi|182632841|gb|ACB93617.1| 60 kDa inner membrane insertion protein [Xylella fastidiosa M23] Length = 565 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 125/583 (21%), Positives = 254/583 (43%), Gaps = 54/583 (9%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA-AVL 57 M + + + ++ ++ W ++ ++ + V +A AV Sbjct: 1 MNQTRVLLIFSWLTVATLLWMDWSKNKNETLEISASHNLGVDSNLELEHAVPQIHAGAVP 60 Query: 58 IDDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + +Q ++ +P+V + L ++ G +L + + + LL+ Sbjct: 61 LQKDSQLIAAAPKVPVINVTTDVLQLKLD--GFSILAADLLRFPQSKDRGAKPIKLLT-D 117 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNL--ISGKILTPTTP--IKLVFKNANNILFER 170 + Y A +VS +N+ S + +S K+ + ++ AN + R Sbjct: 118 DPNYPYSATTGWVSQSNSPVPNLSTFLPEQPDVSYKLANDQNRLVVPFIWTAANGVSIRR 177 Query: 171 TISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-------HKPQTATNTFGVQEGFIA 222 T + + Y I D + N+ ++ R ++ T ++F G + Sbjct: 178 TFTFERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFS-FNGAVW 236 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + D N W+ + ++ + +IP K+ + L+ Sbjct: 237 YSEKGGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQ---ASLYLLAQNG 293 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF--- 339 +R A+ T+ PG++ TT L+ G K I + + ++D+ F Sbjct: 294 SRDIAELRGPAFTVAPGQTTTTEARLWVGPKLVEQITKEH----VKGLDRVVDYSRFQLM 349 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 I + +F ++S+ +L+ N+G AI+ V +++ +PL+ QY S A M+ QP++ +L Sbjct: 350 ALIGQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSASQYKSAAKMRKFQPRLQQL 409 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E++ + Q Q+AM++LYK INP+ GC+PIL+Q+P+FFA+Y V+ S+E+R AP+ Sbjct: 410 KERYGED-RQKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWL 468 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQA 517 GWI+DL DP I P++ + M+ K++P P D Sbjct: 469 GWIQDLTTRDPYFIL-------------------PLLNIVIMWATQKLTPTPAGMDPIAG 509 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ MP++F ++ P+GL +YW + ++++ Q +++ H Sbjct: 510 KMMQVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIRQH 552 >gi|188993861|ref|YP_001905871.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. campestris str. B100] gi|254778172|sp|B0RMM6|OXAA_XANCB RecName: Full=Inner membrane protein oxaA gi|167735621|emb|CAP53839.1| inner membrane insertion protein [Xanthomonas campestris pv. campestris] Length = 575 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 130/604 (21%), Positives = 243/604 (40%), Gaps = 72/604 (11%) Query: 1 MERNWNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERK--------------NIQTVK 44 M + + + L V ++ W + N+ + + Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKDKAAANAPTPIASQAVPAARDPDAAAPAANVPSAQ 60 Query: 45 QPNQVDNSYA-----AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 Q + A A +P + L + L ++ G D L + Sbjct: 61 AIPQAGSPAAVPGTSTTTATATPVAAGAAPAITLTSDVLRLKLD--GRSVLDAELLQFPQ 118 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDY------VSTANNIELPNSNTVWNLISGKILTPT 153 P+ L + + Y A + V T + L G+ T Sbjct: 119 TKDGTEPVKLLT--EDAAHPYNATSGWASERSPVPGVGGFRAEQPGTTFELAKGQ---NT 173 Query: 154 TPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKP 207 + V+ N + R +L Y I D V N S ++ R + Sbjct: 174 LVVPFVWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNGYVFRKLSRVPTILSRG 233 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 T ++F G + + + D N + W+ + ++ + +IP K Sbjct: 234 MTNPDSFS-FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQK 292 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + + L+ R A+ T+ PG+S +T L+ G K + + Sbjct: 293 DQ---ASLYVLAQDGPRDVAELRGPAFTVAPGQSASTEARLWVGPKLVSLLAK----EDV 345 Query: 328 PRFEMLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 + ++D+ F I + +F ++S+ ++ + N+G AI+ + ++L +PL+ QY Sbjct: 346 KGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVLLLRLALYPLSAAQYK 405 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A M+ QP++ +L+E++ Q Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y Sbjct: 406 SGAKMRRFQPRLAQLKERYGDD-RQKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALY 464 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 V+ S+E+R AP+ GWI+DL A DP I P++ M+ Sbjct: 465 WVLVESVELRQAPWLGWIQDLTARDPYFIL-------------------PVLNIAIMWAT 505 Query: 505 MKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K++P P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 506 QKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEK 565 Query: 564 IGLI 567 I Sbjct: 566 PSKI 569 >gi|188579256|ref|YP_001916185.1| putative inner membrane protein translocase component YidC [Xanthomonas oryzae pv. oryzae PXO99A] gi|254778173|sp|B2SUW0|OXAA_XANOP RecName: Full=Inner membrane protein oxaA gi|188523708|gb|ACD61653.1| 60 kDa inner-membrane protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 574 Score = 368 bits (946), Expect = e-99, Method: Composition-based stats. Identities = 130/609 (21%), Positives = 243/609 (39%), Gaps = 71/609 (11%) Query: 1 MERNWNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M + + + L V ++ W + ++ Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKEKAAANAPGAAATQSVPAARDLDAATPSAANVPAA 60 Query: 59 DDRAQALSMSPR------------------VELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 QA + V L + L ++ G D L + Sbjct: 61 QAIPQAGAPGKVPATSTTTATPAAAGTAPVVTLTSDVLRLKLD--GRSVLDAELLQFPQT 118 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDY------VSTANNIELPNSNTVWNLISGKILTPTT 154 +P+ L + + Y A + V T + L G+ T Sbjct: 119 KDGTAPVSLLT--EDAAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFELAKGQ---NTL 173 Query: 155 PIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQ 208 + V+ N + RT +L+ Y I D V N S ++ R + Sbjct: 174 VVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNGYVFRKLSRVPTILSRGM 233 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 T ++F G + + D N + W+ + ++ + +IP + Sbjct: 234 TNPDSFS-FNGATWYSPQAGYERRAFKDYMDDGGLNRQITGGWIALLQHHFFTAWIPQND 292 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + L+ R A+ T+ PG++ TT L+ G K I + Sbjct: 293 Q---ASLYVLNKDGPRDVAELRGPAFTVAPGQTATTEARLWVGPKLVSLIAK----EDVK 345 Query: 329 RFEMLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 + +ID+ F I + +F ++S+ ++ + N+G AI+ V ++L+ +PL+ QY S Sbjct: 346 GLDRVIDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLVVLLRLVLYPLSSAQYKS 405 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 +A M+ QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y Sbjct: 406 SAKMRKFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYW 464 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 V+ S+E+R AP+ GWI+DL A DP I P + M+ Sbjct: 465 VLVESVELRQAPWLGWIQDLTARDPHFIL-------------------PALNIAIMWATQ 505 Query: 506 KMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 K++P P D QA ++ +MP+VF ++ P+GL++YW + ++++ Q +++ HG + Sbjct: 506 KLTPTPGIDPMQAKMMQFMPLVFGAMMAFVPSGLVLYWVVNGGLNLLIQWWMIRQHGEKP 565 Query: 565 GLIDRLRST 573 I R + Sbjct: 566 SKIIRANAK 574 >gi|58584259|ref|YP_203275.1| putative inner membrane protein translocase component YidC [Xanthomonas oryzae pv. oryzae KACC10331] gi|166714253|ref|ZP_02245460.1| putative inner membrane protein translocase component YidC [Xanthomonas oryzae pv. oryzicola BLS256] gi|75508023|sp|Q5GTT3|OXAA_XANOR RecName: Full=Inner membrane protein oxaA gi|58428853|gb|AAW77890.1| 60 kDa inner-membrane protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 574 Score = 368 bits (946), Expect = e-99, Method: Composition-based stats. Identities = 130/609 (21%), Positives = 243/609 (39%), Gaps = 71/609 (11%) Query: 1 MERNWNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M + + + L V ++ W + ++ Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKEKAAANAPVAAATQSVPAARDLDAATPSAANVPAA 60 Query: 59 DDRAQALSMSPR------------------VELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 QA + V L + L ++ G D L + Sbjct: 61 QAIPQAGAPGKVPATSTTTATPAAAGTAPVVTLTSDVLRLKLD--GRSVLDAELLQFPQT 118 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDY------VSTANNIELPNSNTVWNLISGKILTPTT 154 +P+ L + + Y A + V T + L G+ T Sbjct: 119 KDGTAPVSLLT--EDAAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFELAKGQ---NTL 173 Query: 155 PIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQ 208 + V+ N + RT +L+ Y I D V N S ++ R + Sbjct: 174 VVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNGYVFRKLSRVPTILSRGM 233 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 T ++F G + + D N + W+ + ++ + +IP + Sbjct: 234 TNPDSFS-FNGATWYSPQAGYERRAFKDYMDDGGLNRQITGGWIALLQHHFFTAWIPQND 292 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + L+ R A+ T+ PG++ TT L+ G K I + Sbjct: 293 Q---ASLYVLNKDGPRDVAELRGPAFTVAPGQTATTEARLWVGPKLVSLIAK----EDVK 345 Query: 329 RFEMLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 + +ID+ F I + +F ++S+ ++ + N+G AI+ V ++L+ +PL+ QY S Sbjct: 346 GLDRVIDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLVVLLRLVLYPLSSAQYKS 405 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 +A M+ QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y Sbjct: 406 SAKMRKFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYW 464 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 V+ S+E+R AP+ GWI+DL A DP I P + M+ Sbjct: 465 VLVESVELRQAPWLGWIQDLTARDPHFIL-------------------PALNIAIMWATQ 505 Query: 506 KMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 K++P P D QA ++ +MP+VF ++ P+GL++YW + ++++ Q +++ HG + Sbjct: 506 KLTPTPGIDPMQAKMMQFMPLVFGAMMAFVPSGLVLYWVVNGGLNLLIQWWMIRQHGEKP 565 Query: 565 GLIDRLRST 573 I R + Sbjct: 566 SKIIRANAK 574 >gi|71275537|ref|ZP_00651823.1| 60 kDa inner membrane protein [Xylella fastidiosa Dixon] gi|71900184|ref|ZP_00682324.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1] gi|170731353|ref|YP_001776786.1| putative inner membrane protein translocase component YidC [Xylella fastidiosa M12] gi|254778175|sp|B0U6I1|OXAA_XYLFM RecName: Full=Inner membrane protein oxaA gi|71163837|gb|EAO13553.1| 60 kDa inner membrane protein [Xylella fastidiosa Dixon] gi|71730073|gb|EAO32164.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1] gi|167966146|gb|ACA13156.1| 60kDa inner-membrane protein [Xylella fastidiosa M12] Length = 565 Score = 368 bits (944), Expect = 2e-99, Method: Composition-based stats. Identities = 123/529 (23%), Positives = 236/529 (44%), Gaps = 53/529 (10%) Query: 53 YAAVLIDDRAQALSMSPRVEL---KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 AV + +Q ++ +P+V + L ++ G +L + + + Sbjct: 56 AGAVPVQKDSQLIAAAPKVPVINVTTDVLQLKLD--GFSILAADLLRFPQSKDRGAKPIK 113 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG-----KILTPTTPIKLVFKNAN 164 LL+ + Y A +VS +N+ +PN +T SG + V+ AN Sbjct: 114 LLT-DDPNYPYSATTGWVSQSNSP-VPNLSTFLPEQSGVSYKLANDQDRLVVPFVWTAAN 171 Query: 165 NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR-------HKPQTATNTFGV 216 + RT + + Y I D + N+ ++ R ++ T ++F Sbjct: 172 GVSIRRTFTFERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFS- 230 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G + + + D N W+ + ++ + +IP K+ + Sbjct: 231 FNGAVWYSEKGGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQ---ASLY 287 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 L+ +R A+ T+ PG+S T L+ G K I + + ++D+ Sbjct: 288 LLAQNGSRDIAELRGPAFTVAPGQSTMTEARLWVGPKLVEQITKEH----VKGLDRVVDY 343 Query: 337 GWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F I + +F ++S+ +L+ N+G AI+ V +++ +PL+ QY S A M+ Q Sbjct: 344 SRFQLMALIGQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSAAQYKSAAKMRKFQ 403 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ +L+E++ + Q Q+AM++LYK INP+ GC+PIL+Q+P+FFA+Y V+ S+E+ Sbjct: 404 PRLQQLKERYGED-RQKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVEL 462 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-- 511 R AP+ GWI+DL DP I P++ + M+ K++P P Sbjct: 463 RQAPWLGWIQDLTTRDPYFIL-------------------PLLNIVIMWATQKLTPTPAG 503 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 D ++ MP++F ++ P+GL +YW + ++++ Q ++ + Sbjct: 504 MDPIAGKMMQVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIHQY 552 >gi|295698381|ref|YP_003603036.1| inner membrane protein OxaA [Candidatus Riesia pediculicola USDA] gi|291157428|gb|ADD79873.1| inner membrane protein OxaA [Candidatus Riesia pediculicola USDA] Length = 547 Score = 366 bits (939), Expect = 6e-99, Method: Composition-based stats. Identities = 126/579 (21%), Positives = 261/579 (45%), Gaps = 60/579 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 ++N + + S +I W+N V E+ I +D S + Sbjct: 4 QKNLLFIALLFFSSLIWQIWKNDKV--------QEKTLINAESNDIPLDRSS-----KYQ 50 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 Q + +++K ++ KG ++L Y ++S+ P + + + Y Sbjct: 51 IQKGEYNSFIKVKTNVFEILLDKKGGDIHRVDLIQYKKKLNSDEPFRIIDTKEDF--VYQ 108 Query: 122 AELDYVSTANNIELPNSNTVWNLISG-------KILTPTTPIKLVFKNANNILFERTISL 174 + ++ + +N + S + L+F + NN+++E+ Sbjct: 109 VQSGFIGKNGPDNISYNNGIRPTYSSRRDYFIIDNEKEYIKVPLIFVSKNNVIYEKIYVF 168 Query: 175 DEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-----TFGVQEGFIAVLGDKS 228 Y ++ +TNNS + I S G++ ++ ++ N F V+ A Sbjct: 169 KRDQYDIEVEYRITNNSAENIEISIFGQLKQNVEESYDNRLENRNFSVRSYRGAAYSSDQ 228 Query: 229 LVEQK--YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 +K + D+ K + H + W+ + +Y+AS +I + + + ++ Sbjct: 229 TKYKKCTFKDLMKKKL-EIHTKSGWIAMLQQYFASAWILND--QYINSVYSINFQGKSAI 285 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + +I I + + L+ G + + ++ +D+GW +FI++P+ Sbjct: 286 IGYRTPKILIKSNERFQYISKLWIGPELQTEMSKVAN-----YLDLTVDYGWLWFISQPL 340 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + Y VGN+G +I++ T V+ L +PL K QY+S A ++ +QPK++E++ + + Sbjct: 341 FQLLQFIYRFVGNWGFSIVIITFIVRGLMYPLTKAQYISMAKIRLLQPKLEEIKNRIGED 400 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + + + +++LY+ +NPL GC P+++Q+P+F A+Y ++ S+E+R APF WI+DL+ Sbjct: 401 KNK-MSQEVVELYRKEKVNPLGGCLPLIIQMPIFLALYYMLIGSVELRQAPFIYWIQDLS 459 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK--GQAMILNWMP 524 + DP P++M +M+ KMSP + I+N++P Sbjct: 460 SKDPYYFL-------------------PLLMGCTMYFIQKMSPNTNTSELSREKIINYIP 500 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + F FP+GL++Y+ SN+++I+QQ I + + Sbjct: 501 IFFTIFFLWFPSGLVLYYIISNLVTIIQQKAIYRFLKKK 539 >gi|94987512|ref|YP_595445.1| preprotein translocase subunit YidC [Lawsonia intracellularis PHE/MN1-00] gi|259515698|sp|Q1MPF3|OXAA_LAWIP RecName: Full=Membrane protein oxaA gi|94731761|emb|CAJ55124.1| Preprotein translocase subunit YidC [Lawsonia intracellularis PHE/MN1-00] Length = 532 Score = 364 bits (934), Expect = 3e-98, Method: Composition-based stats. Identities = 153/575 (26%), Positives = 262/575 (45%), Gaps = 60/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF-----YVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 ME +AI LS+++ W +F ++ P+++ + NER + +Q S A Sbjct: 1 MED-KRIVLAIILSLVVFLGWHSFAEYMGWISPKVQHVANERHSSV-----DQTATSNIA 54 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + + V ++ P I I+ G L+ Y +++ + SP+V L+SP Sbjct: 55 LDSVQSVFSPPTGKDVYIETPLYIAKIHSSGGILSSFILKKYKVNLDNTSPLVNLVSPEA 114 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKI-LTPTTPIKLVFKN-ANNILFERTIS 173 ++ N + SN W+ + G + L P +L F N + R + Sbjct: 115 SQAMPL------GITLNGQPSWSNGNWSFLGGDLYLKPGETKELTFVGIVNGVKIIRIFT 168 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 + + YL + S Q + ++ T + +A S E+ Sbjct: 169 FNADSYLIHEKLQLA--SEKQNSCPTKVGLLVAATPFGTGQYDPTR--MAWSIKDSFKEE 224 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 D K +W G+ Y+ +V S + + +D ++ + Sbjct: 225 TSIDTLKEKGIQESGEFNWGGVMSNYFMNVVALSDPLYLTIKGRIQND---VWRVALERS 281 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + I + + T + G K+ + A + E ID+G F IAKP+ +++ Sbjct: 282 NVLIPAEGTTSITVNWWFGPKDRELLSR-----APDKLENAIDFGMFSIIAKPLLTALTF 336 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 FY GN+G+AI++ T+ +K++F+PL++K Y S MK +QP + +LREK+ L Sbjct: 337 FYEYTGNWGVAIIVLTLCIKIVFWPLSQKSYNSMEQMKKLQPMMQKLREKYANDRD-TLN 395 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIKD 464 + ++QLYKT+ +NP GC PILLQIPVF +Y+ + S+E+RHA F W+ D Sbjct: 396 REIMQLYKTYKVNPAGGCLPILLQIPVFIGLYQALLNSIELRHATFIYYLPFTHLVWLAD 455 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+AADP I P++M SMF+Q K++P D Q I+ MP Sbjct: 456 LSAADPFYIT-------------------PLLMGASMFLQQKLTPASGDPTQQKIMMVMP 496 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++F +FPAGL+IYW ++N++SI QQ +++ Sbjct: 497 IIFTVMFLNFPAGLVIYWLFNNLLSIGQQWWMLRK 531 >gi|84626027|ref|YP_453399.1| putative inner membrane protein translocase component YidC [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|123520412|sp|Q2NX52|OXAA_XANOM RecName: Full=Inner membrane protein oxaA gi|84369967|dbj|BAE71125.1| 60 kDa inner-membrane protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 578 Score = 363 bits (932), Expect = 4e-98, Method: Composition-based stats. Identities = 130/613 (21%), Positives = 243/613 (39%), Gaps = 75/613 (12%) Query: 1 MERNWNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M + + + L V ++ W + ++ Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKEKAAANAPGAAATQSVPAARDLDAATPSAANVPAA 60 Query: 59 DDRAQALSMSPRVE----------------------LKNPSLIGSINLKGAQFDDLNLRG 96 AQA + L + L ++ G D L Sbjct: 61 QPIAQAGAPGTVPATSTTTATATATPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELLQ 118 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDY------VSTANNIELPNSNTVWNLISGKIL 150 + +P+ L + + Y A + V T + L G+ Sbjct: 119 FPQTKDGTAPVSLLT--EDAAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFELAKGQ-- 174 Query: 151 TPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMR----- 204 T + V+ N + RT +L+ Y I D V N S ++ R Sbjct: 175 -NTLVVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNGYVFRKLSRVPTIL 233 Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 + T ++F G + + D N + W+ + ++ + +I Sbjct: 234 SRGMTNPDSFS-FNGATWYSPQAGYERRAFKDYMDDGGLNRQITGGWIALLQHHFFTAWI 292 Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 P + + L+ R A+ T+ PG++ TT L+ G K I Sbjct: 293 PQNDQ---ASLYVLNKDGPRDVAELRGPAFTVAPGQTATTEARLWVGPKLVSLIAK---- 345 Query: 325 LAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 + + +ID+ F I + +F ++S+ ++ + N+G AI+ V ++L+ +PL+ Sbjct: 346 EDVKGLDRVIDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLVVLLRLVLYPLSSA 405 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 QY S+A M+ QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FF Sbjct: 406 QYKSSAKMRKFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFF 464 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A+Y V+ S+E+R AP+ GWI+DL A DP I P + M Sbjct: 465 ALYWVLVESVELRQAPWLGWIQDLTARDPHFIL-------------------PALNIAIM 505 Query: 502 FIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + K++P P D QA ++ +MP+VF ++ P+GL++YW + ++++ Q +++ H Sbjct: 506 WATQKLTPTPGIDPMQAKMMQFMPLVFGAMMAFVPSGLVLYWVVNGGLNLLIQWWMIRQH 565 Query: 561 GAEIGLIDRLRST 573 G + I R + Sbjct: 566 GEKPSKIIRANAK 578 >gi|298528960|ref|ZP_07016363.1| membrane protein insertase, YidC/Oxa1 family [Desulfonatronospira thiodismutans ASO3-1] gi|298510396|gb|EFI34299.1| membrane protein insertase, YidC/Oxa1 family [Desulfonatronospira thiodismutans ASO3-1] Length = 598 Score = 361 bits (927), Expect = 2e-97, Method: Composition-based stats. Identities = 137/575 (23%), Positives = 246/575 (42%), Gaps = 51/575 (8%) Query: 21 WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ------------ALSMS 68 W + + + P + D + ++ Sbjct: 20 WNLLFPPQTPDREEVREEERLEETVPEERDLAPEPDPREEAEDTWDPHEAQIPGFEPEEG 79 Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 ++++ P + N G + L+ Y D+ ++P+V L++P + + + Sbjct: 80 EQIKVDTPLYQATFNSAGGILEHFVLKEYKQDIEPDAPMVDLVTPRSLARGPMG-ITW-- 136 Query: 129 TANNIELPNSNTVWNLISGKI-LTPTTPIKLVFKNA-NNILFERTISL-DEHYLFKIVDT 185 N W L + L P L F + F R ++ + Y + Sbjct: 137 ---NRAPTWIEGEWALNGEDLDLEPGDEKTLTFTGRMGGVKFIREMTFVADTYKIQENLQ 193 Query: 186 VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 V N + Q G I A + + + L ++ ++ N Sbjct: 194 VVNTTEAQAS----GEIANILAGPAFSDSRLNPTRLGYYDQDGLSHEREGNLSDGISRN- 248 Query: 246 HESNSWLGISDKYWASVFIPSK-ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 W GI D Y+ +P+ + + G +Q S + + P S T Sbjct: 249 -TGIQWAGIVDHYFMLTLVPASPDVQLQAHH-----GDDLFQISLSKSMY-LEPETSQTM 301 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 + G K+ + A E I +GWF +A+P+ ++ +FY N+G+AI Sbjct: 302 DQIYYLGPKDREYLEG-----APNHLEESIYYGWFNLLAQPLMKVLHFFYQYTANYGVAI 356 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 +L T+ +K++F+PL+ K Y S MK +QP + ++REK K + + + +++LYKT+ + Sbjct: 357 LLLTLVIKIIFWPLSHKSYKSMNQMKKLQPMMTKIREKHKDD-RKAMNEEIMRLYKTYKV 415 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NPL GC PIL+QIPVF A+Y+ + S+E+RHAPF I D + L PFY+ Sbjct: 416 NPLGGCLPILVQIPVFIALYQGLLGSVELRHAPFISHIP---FTDIVWLADLSARDPFYI 472 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 P++M +MF+Q +M+P P D QA I+ ++P+VF+F +FP+GL+IYW Sbjct: 473 T--------PLLMGATMFLQQRMAPAPGDPLQARIMQFLPLVFIFIFITFPSGLVIYWLA 524 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 +NV+SI QQ +++ + ++ + + + Sbjct: 525 NNVLSIGQQWYMLRSADVPLQKAEQKAAEKAGKSS 559 >gi|317484430|ref|ZP_07943344.1| YidC/Oxa1 family membrane protein insertase [Bilophila wadsworthia 3_1_6] gi|316924318|gb|EFV45490.1| YidC/Oxa1 family membrane protein insertase [Bilophila wadsworthia 3_1_6] Length = 534 Score = 359 bits (921), Expect = 9e-97, Method: Composition-based stats. Identities = 140/563 (24%), Positives = 243/563 (43%), Gaps = 34/563 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ F+AIAL++ ++ AW + + Q A Sbjct: 1 MDD-KRTFLAIALAIAVLLAWTPLAEHMGWIQPQQRPAATQEATPAPAPAAQTAVAPASS 59 Query: 61 -RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 S V+++ P I G L+ Y + ++SP V L+SP ++ Sbjct: 60 LPVFTPSAGTDVKVETPLYSAVIYSGGGILRSFTLKHYDETIKADSPKVNLISPEASQT- 118 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKI-LTPTTPIKLVFKN-ANNILFERTISLD-E 176 A L N + S W+ + L L F + + R IS + + Sbjct: 119 --APLGLTV---NGQPSWSTGQWSFQGSDLNLKAGEQGSLTFTGIVDGVRVTRVISFNAD 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 +YL V + + +N + E S Sbjct: 174 NYLLSENILVGSADQAPRTVRLGFTVA---ATPFSNGKYDPTRLAWDANESFKEETSAST 230 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + + I +W G+ Y+ +V P+ + + + G A + +T Sbjct: 231 LAEKGIIE-QGVFNWAGVMSNYFMNVTAPADPNNLTLKGRV--QGDVWRLALERPDLLTP 287 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G + + G K+ + A +++G F IA+P+ ++++F++ Sbjct: 288 SNGGEVPVAVNWWFGPKDRTMLAT-----APDHLSQAVNFGMFSIIARPLLTILAFFHSF 342 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+GIAI++ T ++++F+PL++K + S MK +QP + +LREK K + L K M+ Sbjct: 343 VGNWGIAILMLTFCIRVVFWPLSQKSFKSMEQMKKLQPMMKKLREKHKDDK-EALNKEMM 401 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 QLYKT+ +NP GC PI++QIPVF +Y+ + S+E+RHA F I+ L T + L Sbjct: 402 QLYKTYKVNPAGGCLPIVVQIPVFIGLYQALLNSIELRHASF---IEYLPFTHITWLADL 458 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 PFY+ P++M SMF+Q +++P D Q ++ +MPV+F +FPA Sbjct: 459 SAADPFYIT--------PLLMGASMFLQQRLTPAAGDPTQQKVMMFMPVIFTVMFINFPA 510 Query: 537 GLIIYWSWSNVISIVQQAVIMKM 559 GL+IYW +N++SI QQ +++ Sbjct: 511 GLVIYWLCNNILSIGQQWWMLRK 533 >gi|332143491|ref|YP_004429229.1| inner membrane protein, 60 kDa [Alteromonas macleodii str. 'Deep ecotype'] gi|327553513|gb|AEB00232.1| inner membrane protein, 60 kDa [Alteromonas macleodii str. 'Deep ecotype'] Length = 441 Score = 358 bits (920), Expect = 1e-96, Method: Composition-based stats. Identities = 101/449 (22%), Positives = 197/449 (43%), Gaps = 25/449 (5%) Query: 1 MERNWNY-FVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTV------KQPNQVDNS 52 ME ++ + +AL S ++ WQ Y +E + + + V +S Sbjct: 1 MESQRSFLIIGLALVSFLLWQQWQKDYGPQPVEPVEQQAQQTTQGVPSFNDTGNEDVPSS 60 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 + A S + +E+K +L I+L G +L + ++ S+ P L S Sbjct: 61 DSVPAAQPAVTAQSTNRIIEVKTDTLDLRIDLLGGDVISADLLKFPVEQGSDIPYSLLRS 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLIS--GKILTPTTPIKLVFKNANNILFER 170 + Y A+ + N V+ S ++ T I L +KN + + Sbjct: 121 GNG---LYVAQSGLIGAQGPDASANGRPVYTAQSEFYEMTGDTLVIPLTWKNNQGLSITK 177 Query: 171 TISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAVLGDK 227 T + HY + + N + P ++ + G D Sbjct: 178 TFTFTKNHYDVNVSYDINNGTGSAATVQPYAQLKQVMEFEDDGNMFMPTYRGAAYSTEDD 237 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + +IE ++ W+G+ + Y+ S ++PS+E + + L + +A Sbjct: 238 RYQKYSFDEIEDDNLRE-TTKAGWVGMLEHYFVSAWVPSQEQTNTVYSRNLKNQYAV--I 294 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + T+ G + T + L+ G K+ + + L ++ +D+G ++I++P+F Sbjct: 295 GVLSPSETVASGDTKTIASTLYMGPKDQDKLAKIARGL-----DLTVDYGILFWISQPLF 349 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+++ ++LV N+G+AI+L T+ VK + L KKQY S A M+N+ PK+ +L+++F Sbjct: 350 ALLTFLHSLVNNWGVAIILITIVVKGAMYWLTKKQYESMARMRNLAPKMQQLKDRFGDD- 408 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 Q + +AM++LY+ +NP+ GC P+LLQ Sbjct: 409 RQKMSQAMMELYRKEKVNPMGGCLPLLLQ 437 >gi|218461068|ref|ZP_03501159.1| putative inner membrane protein translocase component YidC [Rhizobium etli Kim 5] Length = 341 Score = 352 bits (903), Expect = 1e-94, Method: Composition-based stats. Identities = 135/341 (39%), Positives = 189/341 (55%), Gaps = 16/341 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----------------ERKNIQTVK 44 ME N NYF+AIALSV+IV WQ Y+ PRIE T Sbjct: 1 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGTTPA 60 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + S A QAL+ +PRV + P+L GSINL GA+ DDL L+GYH V + Sbjct: 61 PTSGTAPSGQAAATATLEQALAKNPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDS 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SPI+TL SP+ TK+ YF EL Y+ + +P ++T+W G LT TP+ L + N Sbjct: 121 SPIITLFSPAETKDGYFTELGYIGSDATGAVPGASTLWTAPEGAKLTEKTPVTLSYTNDK 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F + D + N + S GR+ R+ T + + + EGFI V+ Sbjct: 181 GLTFTRTISVDERYMFTVADKIENTGQAPVSLSSYGRVTRYNKPTTPSVYVLHEGFIGVI 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD LVE KYS +EK ++ + WLGI+DKYWA+ +P + +++ ++F + +DG R Sbjct: 241 GDDGLVETKYSAVEKEAVMPAKSTGGWLGITDKYWAATIVPPQTSAYEARFSHFADGQPR 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 YQA + + T+ PG+SI N +FAGAKE P I YE Sbjct: 301 YQADYKDDAFTVAPGQSIELKNLVFAGAKEVPVIDGYEASY 341 >gi|85858985|ref|YP_461187.1| 60 kDa inner membrane protein [Syntrophus aciditrophicus SB] gi|123516274|sp|Q2LSF9|OXAA_SYNAS RecName: Full=Inner membrane protein oxaA gi|85722076|gb|ABC77019.1| 60 kDa inner membrane protein [Syntrophus aciditrophicus SB] Length = 544 Score = 351 bits (901), Expect = 2e-94, Method: Composition-based stats. Identities = 137/529 (25%), Positives = 225/529 (42%), Gaps = 32/529 (6%) Query: 33 MNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 +P+ + + + P KG Sbjct: 45 PAAPVSPQTPADEPSSGSAANPETAAALPVDGTEKEQEITVDTPLYQAVFTTKGGALKSF 104 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L+ Y ++ NS + L+ S+ + I K + Sbjct: 105 ALKNYRETLAVNSKPIELVDVKEAMPYPLGISFPASSVDVSPASFFKADVPAIDLKSTSE 164 Query: 153 TTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 + + V I E+ + + Y + N S + ++ +A Sbjct: 165 SRRLTFVQTWPGKIKIEKIYTFNPGKYAIDLEIRTYNLSEVPLSQEIALFWNQYVDPSAK 224 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 G ++ + K + +K + +E S W G KY+ + IP + Sbjct: 225 EDSYGHTGPVSYVA-KDVEREKVTKMETPKSLGPDVS--WGGFESKYFIAAMIPQNPS-- 279 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 + D + I PG++ T LF G K++ + E Sbjct: 280 LTSLSLSKDSSNMVSTSLKGPKNIIPPGQAGFFTYKLFLGPKDYNILKAQG-----VGLE 334 Query: 332 MLIDWG-WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ID+G W ++A P+ + + + YN V N+GIAI++ T+ +K+LF+PL K Y S M+ Sbjct: 335 NAIDFGSWLKWLAMPLLLSLKFLYNYVHNYGIAIIILTILIKILFWPLGNKSYKSMKEMQ 394 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QPK+ ELREK+K + L + + LYK + +NP+ GC P+++QIPVFF +YK + + Sbjct: 395 KLQPKMLELREKYKNDKAR-LSQETMALYKAYKVNPMGGCLPMIIQIPVFFGLYKALLYA 453 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+RH+PF+ WI+DL+A DP I PIIM +MF+Q KM+P Sbjct: 454 IELRHSPFFLWIQDLSAKDPYYIT-------------------PIIMGATMFLQQKMTPV 494 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 D QA I+ WMPV+F F +FP+GL+IYW ++N++SI QQ I K Sbjct: 495 SGDPTQAKIMLWMPVIFTFMFLNFPSGLVIYWLFNNILSIGQQYYINKQ 543 >gi|327398260|ref|YP_004339129.1| Membrane protein oxaA [Hippea maritima DSM 10411] gi|327180889|gb|AEA33070.1| Membrane protein oxaA [Hippea maritima DSM 10411] Length = 522 Score = 349 bits (895), Expect = 9e-94, Method: Composition-based stats. Identities = 150/576 (26%), Positives = 260/576 (45%), Gaps = 69/576 (11%) Query: 1 MERN--WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN-IQTVKQPNQVDNSYAAVL 57 M+ N +AI + I++ A+ F++ + N + V Q+ A Sbjct: 1 MKENNEKRILMAILVVTILITAYTYFFLPKQQPTPKNSNATKAKQVDHKQQLLQQTAKTT 60 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + ++ + I I+ +L L+ Y + N V L+ S Sbjct: 61 AKKQTDL--KEKLITVETDNYILKISSLNGSIKELTLKKYSI----NKANVELVKSSG-- 112 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF---KNANNILFERTISL 174 Y+ L+ V +E NT + S ++ K+ +N +T S Sbjct: 113 --YYNTLETVFENRQLEDMEENTPYKPNSYRVELSKLNKNFKLILKKSNDNYTIIKTFSF 170 Query: 175 DE-HYLFKIVDTV-TNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 + Y F V NN + + S Q A + G +A++ + Sbjct: 171 KDGDYAFDFNVRVLKNNQPVKAKLSVYAGPDLGDLQKAKYS---HLGAVALVDN------ 221 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 I E W+ + KY+ F+P S + + L+DG+ Y S Sbjct: 222 --DKIRTDKKIKPDEDIHWIALESKYFCFAFLPQNSNSLLAGYTKLNDGNYVYVNLESPA 279 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 ++TI +AG K TI + + + +I +G F FI KP+ ++++ Sbjct: 280 KLTI------------YAGPKSKETIAAVDH-----KLDKIIRFGMFGFIGKPLLYVLNW 322 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 Y++ GN+G+AI++ T ++L+F+PL+ K + S M +QPK+ EL+ K+K P Q L Sbjct: 323 LYSIFGNYGVAIIVLTFLIRLIFYPLSFKSFKSMKEMAKLQPKLKELQAKYKGKPDQ-LN 381 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 KA ++LYK H +NP GC P+++QIPVFFA+Y V+ ++E+R APF WI DL++ DP Sbjct: 382 KATMELYKKHKVNPFGGCLPVVIQIPVFFALYNVLLNAIELRGAPFMLWITDLSSKDPYY 441 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 + PI+M L+M++Q K++P D Q I+ +MP++F F Sbjct: 442 VL-------------------PILMGLTMYVQQKLTPATGDPTQQKIMMFMPLIFTFMFM 482 Query: 533 SFPAGLIIYWSWSNVISIVQQAV---IMKMHGAEIG 565 FP+GL++YW+ +N+++I QQ + I+K + Sbjct: 483 GFPSGLVLYWATNNLLTIAQQFIDSQILKAQEKKQK 518 >gi|116750023|ref|YP_846710.1| 60 kDa inner membrane insertion protein [Syntrophobacter fumaroxidans MPOB] gi|166977422|sp|A0LLH3|OXAA_SYNFM RecName: Full=Inner membrane protein oxaA gi|116699087|gb|ABK18275.1| protein translocase subunit yidC [Syntrophobacter fumaroxidans MPOB] Length = 553 Score = 348 bits (894), Expect = 1e-93, Method: Composition-based stats. Identities = 139/553 (25%), Positives = 251/553 (45%), Gaps = 35/553 (6%) Query: 21 WQNFY-----VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRV---E 72 W+ ++ P + P V A + + Sbjct: 19 WEMYFGLFRMPAPPPNKTEQAAPTTTQPATPQTVPPQAATPQALPQDHVFRPDQQFQSWA 78 Query: 73 LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANN 132 +++P +I GA+ L+ + V +SP + +++ A + ++ Sbjct: 79 IEDPLYRMNIIAPGARLSSFELKKHRKAVQPDSPPMQMVTSQTGGYLPMA----IDLLHH 134 Query: 133 IELPNSNTVWNLISG--KILTPTTPIKLVFKNA--NNILFERTIS-LDEHYLFKIVDTVT 187 + S + +G +L P L F + ++ + E YL + + Sbjct: 135 QDWQLSTRPFFSEAGPKTVLEDKKPRVLSFSTEVPGKVRVTKSFTCSPESYLLDLEVQIG 194 Query: 188 NNSIDQIRFSP--RGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 N S +++ + P +++ + + L SL D+ KS + Sbjct: 195 NLSSERLVDQMGISFYFLPFSPPEEESSYNPSQ--LTTLEKGSLKNFTTKDLSKSDLV-L 251 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 +W+ + ++ + IP E + + L Q + + + ++ + Sbjct: 252 KPPMTWVAYENNFFINAIIPVAEGGYQFVPRILDATKGLLQLVYLTDPFQLEGNETKSFK 311 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + G KE T+ E LA +D+GWF FIAKP+ ++ +FY N+G+AI+ Sbjct: 312 LRFYIGPKELSTLARAEHQLA-----SAVDYGWFTFIAKPLVYVLDWFYRYTHNWGVAII 366 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 L T+ +K+LF+PL +K Y S MK IQPK+ ++REK+K + + + ++ LY+T+ +N Sbjct: 367 LLTIVIKILFWPLTQKSYQSMQKMKKIQPKMTQIREKYKGD-REKMNQELMGLYRTYKVN 425 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P+ GC P+LLQIPVFFA+Y++++ ++E+RH PF WI DL A D I F +P Sbjct: 426 PMGGCLPMLLQIPVFFALYRMLNGAVELRHEPFMLWIDDLTAPDRLPI-------GFDIP 478 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + + ++M ++MFIQ KM+P D Q I+ MPV+F +FP+GL++YW + Sbjct: 479 YLGGLPVLTLLMGITMFIQQKMTPSAGDPRQDQIMMIMPVMFTVFFVNFPSGLVLYWLVN 538 Query: 546 NVISIVQQAVIMK 558 NV+SI QQ + + Sbjct: 539 NVLSIAQQYWVNR 551 >gi|27904529|ref|NP_777655.1| hypothetical protein bbp016 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38502982|sp|Q89B34|OXAA_BUCBP RecName: Full=Membrane protein oxaA gi|27903926|gb|AAO26760.1| putative membrane protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 536 Score = 348 bits (894), Expect = 1e-93, Method: Composition-based stats. Identities = 122/499 (24%), Positives = 241/499 (48%), Gaps = 44/499 (8%) Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD 125 ++ + +K L +NL G + L + ++S+ +V L +N Y A+ Sbjct: 51 KLASNIIIKTDVLKIQVNLYGGDIEKAELLHFKSKLNSSQSLVLL--DTNENFVYQAQCG 108 Query: 126 YVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEH-YL 179 L + K + L + + + I++++ L Y Sbjct: 109 ITGKDGADNLQKHIRPLYIAKRKYYELSRHNKKIEVPLQWISKDGIIYKKIFVLKSGEYD 168 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 + + N + ++ S G++ + T TN F +Q A + KY Sbjct: 169 VSVKYKINNITNKHLKVSMFGQLKQTINLPEDKNTYTNNFALQTFRGAAYSSDNDKYVKY 228 Query: 235 SD---IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 S + K + + W+ + KY+A+ +IP S+ + S G + + + Sbjct: 229 SFDSIVNKEKKNIVVTHSGWVAMLQKYFATSWIPDN--SYLNTMYIGSSGDNLAEIGYYS 286 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I I P +I+ ++ L+ G + + +L ++ +D+GW +F+++P+F L++ Sbjct: 287 RPIDIFPHSTISLSSKLWIGPEIQNKMAVIASNL-----DLTVDYGWLWFLSQPLFKLLN 341 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + YN+ GN+G++I+L T +K + FPL K Q+ + A ++ +QPKI+ +++K ++ Q + Sbjct: 342 FLYNICGNWGVSIILITFIIKGITFPLTKSQFKTMAKIRKLQPKINYIKKK-FKNNNQKI 400 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + ++ LYKT +NPL GC+P+ +Q+P+F A+Y ++ S+E+RHAPF+ WI DL+ DP Sbjct: 401 SEEIMSLYKTEKVNPLGGCFPLFIQMPIFLALYYMLISSVELRHAPFFLWIHDLSDQDPF 460 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 + PI+M ++MF +++P D Q I+N++P++F Sbjct: 461 YVL-------------------PILMGVTMFFIQRVTPSNVTDPVQKKIMNYIPILFTVF 501 Query: 531 LSSFPAGLIIYWSWSNVIS 549 FP+GL++Y+ SN+++ Sbjct: 502 FLWFPSGLVLYYLISNLVT 520 >gi|258593684|emb|CBE70025.1| putative Inner membrane protein oxaA [NC10 bacterium 'Dutch sediment'] Length = 557 Score = 348 bits (894), Expect = 1e-93, Method: Composition-based stats. Identities = 135/577 (23%), Positives = 244/577 (42%), Gaps = 45/577 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA--AVLI 58 M +A+AL+ +I++ Q P+ + ++E + V + S A A Sbjct: 1 MSSQVRALLAVALATVILFGAQFLLPGPKESKESSEPSKQEAVGTATKSPTSPASKAPGP 60 Query: 59 DDRAQALSMSPRVE-----LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 +R Q + PR ++ + + +G L+ Y +V L Sbjct: 61 LERPQVREVVPRAPEREAIVETDVVRAVLTSRGGALKSWRLKSYRAADGQGVDLVAL-QQ 119 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 ++ +L S + T I + + + + ++ Sbjct: 120 GELPGPLLVSSGNPEEPAPLDFDIDKAEVSLRS---PSETGSITFSSRGSGPLQLSKRLT 176 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG----FIAVLG--D 226 + Y ++ + N I +P + + +G ++ D Sbjct: 177 FKGNSYRVEVEFSWKNTGKKPITIAP-------EIAWGPGFYSGVDGERAQVVSATSWVD 229 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 V ++ SW + + Y+A+ +P + S + K + Sbjct: 230 GRRVTDDLGSLK--GAVTHSGQVSWTALQNLYFAAALLPEGKGSTATIRKGPEEQPV--- 284 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 ++ PG +T +++G K+ ++ DL+ ++D GWF +A+P Sbjct: 285 IALVTPTQSLEPGGGLTQRVAVYSGPKDLDHLNAAGSDLS-----KIVDLGWFDALARPA 339 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 L+ + + GN+G+AI+L +V K++ PL K S MK +QPKI + E+ K + Sbjct: 340 LHLLRFLNRISGNYGVAIILVSVLQKIVLHPLTAKSLRSMQAMKALQPKIAAISERNKNN 399 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 P Q Q+ ++ LYK H +NPL GC P+L+Q+P+F A+Y +S S+EM AP + WIKDL+ Sbjct: 400 P-QKKQQEVMGLYKKHGVNPLGGCLPMLIQLPIFVALYNALSSSVEMWRAP-FLWIKDLS 457 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-PADKGQAM-ILNWMP 524 D F ++G+ + + ++M SMF Q KMSPP +D QA +L MP Sbjct: 458 QPDALFAFDVWGLKDY------PFNLLALLMGASMFFQQKMSPPSSSDPQQAKLMLWMMP 511 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +F F +FP+GL++YW SN++ + QQ + K Sbjct: 512 TMFTFMFWTFPSGLVLYWLVSNILQMGQQQWLQKRGK 548 >gi|291285982|ref|YP_003502798.1| membrane protein insertase, YidC/Oxa1 family [Denitrovibrio acetiphilus DSM 12809] gi|290883142|gb|ADD66842.1| membrane protein insertase, YidC/Oxa1 family [Denitrovibrio acetiphilus DSM 12809] Length = 509 Score = 348 bits (894), Expect = 1e-93, Method: Composition-based stats. Identities = 150/561 (26%), Positives = 251/561 (44%), Gaps = 60/561 (10%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N N +AI LS +++ A+Q F+ P+ N +++ QT Q+ A I Q Sbjct: 2 NKNTVLAIGLSALVILAFQVFFA-PKPTVQNQVQQSAQTEDNKGQIVPVEDAQPITIEEQ 60 Query: 64 ALSMSPRV----ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 P + ++ ++ N + + YH + + + S + Sbjct: 61 TAQTEPMILETFDVLTDNVRYVFNANTGNIREAVINSYH-----SRDLTNVGFKSVNGDV 115 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 FA++ ++S + + TT + + ++ ++ + D+ YL Sbjct: 116 VFADVPFISAYTSDV-------------QKTNGTTTVTFSGSQGDIVVTKKYVINDDSYL 162 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 K + N + I + + +G + + K L ++K ++K Sbjct: 163 VKGELVLNNTGDRTVNVPLTSGIGANAVDGFESDRYSFQGPL-MFDGKRLKKEKAEKVDK 221 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 S + + + W+G KY+ K + ++ + P Sbjct: 222 SIVVDHPK---WVGYMSKYFMIGV-------AQDYSKGTISPAGGSAKITGSADMKLNPD 271 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 T LFAG KE+ + Y+ + E ID+G F FIA PM + Y+ V N Sbjct: 272 ARETVEFSLFAGPKEYDLLKSYD-----LKLEKSIDFGIFSFIAIPMLKFLKIIYSYVHN 326 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G+AI+L T+ +K+L FPL +K VS M ++QPK+ E++EKFK + A ++LY Sbjct: 327 YGVAIILLTLVIKILTFPLTQKSMVSMKKMSSLQPKMLEIKEKFKGDKEKT-NAATMELY 385 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NPL GC P++LQIP+FFA+YK + +++E++ APF WI DL+ DP I Sbjct: 386 KNEGVNPLGGCLPMVLQIPIFFALYKTLLLAIELQGAPFMLWITDLSLKDPYYIS----- 440 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSFPAGL 538 PI+M SMF+Q KM+P D Q I +MP++F F +FPAGL Sbjct: 441 --------------PILMGASMFLQQKMTPSTAQDPLQQKIFTFMPLIFTFLFLTFPAGL 486 Query: 539 IIYWSWSNVISIVQQAVIMKM 559 ++YW +NV+SI QQ I K Sbjct: 487 VVYWLTNNVLSIAQQYFINKK 507 >gi|206890197|ref|YP_002249042.1| inner membrane protein OxaA [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742135|gb|ACI21192.1| inner membrane protein OxaA [Thermodesulfovibrio yellowstonii DSM 11347] Length = 513 Score = 342 bits (878), Expect = 9e-92, Method: Composition-based stats. Identities = 148/574 (25%), Positives = 261/574 (45%), Gaps = 71/574 (12%) Query: 1 MERN-WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 ME+ F+A+ LS+ I++ Q Y ++ + Q+ S + Sbjct: 1 MEKTGLRAFLAVILSMAILFGSQYLYTKYYKPSEVQQQPVEVKKEDKKQIPQSVQPEPLK 60 Query: 60 DRAQALSMS----PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 V ++N ++ +GA + L+ Y ++ + L S Sbjct: 61 KEEPKQISKDIKYREVSIENDVFKVILSNEGATIKSVELKKYK---DNSGKPIILTS--- 114 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKI---LTPTTPIKLVFKNANNILFERTI 172 +++ +S + + + S ++N+ + + + + N +NI +RT Sbjct: 115 ------SDILPLSISKDGKFNYSKVMFNIDDSNVSFKNSNQAVVVFTY-NDSNIFLKRTF 167 Query: 173 SLDE-HYLFKIVDTVTNNSIDQIRFSP-RGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 ++ Y+ I + V + G + G + +L + + Sbjct: 168 FFNKTDYVIDIKEEVKGFGSYYVTLGKDFGIFEKEDSP--------HWGPV-ILKEADRI 218 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 E S I++++ + E W+ DKY+ S +P + + Y D Sbjct: 219 ELNPSKIKETN--TYKEGVKWIAQEDKYFFSAIVPVTKANQFVVLPYNGD---------- 266 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 +T + + +FA KE+ + + E ++D+G+F IA+P+F + Sbjct: 267 --ALTGVEFNDGINSYRVFAAPKEYDYLKKFN-----VGLEHIVDFGFFSIIARPLFWFL 319 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 Y+L+GN+GIAI++ T+ V++ F P+ + S + +QPK+ +L+E++K P Q Sbjct: 320 KLLYSLIGNYGIAIIILTILVRIPFIPIVNRGQKSMQKLSELQPKLMQLKEQYKNDP-QR 378 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 LQK M++LYK + INP++GC P+LLQIPVFFA+YK+++I++E+R APF WI DL+A DP Sbjct: 379 LQKEMMELYKKYKINPMSGCLPMLLQIPVFFALYKILTIAIELRQAPFMFWIHDLSAKDP 438 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 + PIIM +M IQ KM+P AD Q I+ +PVVF F Sbjct: 439 YYVL-------------------PIIMGATMLIQQKMTPSTADPTQQKIMLLLPVVFTFL 479 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 SFP+GL++YW +N+ I QQ I K + Sbjct: 480 FLSFPSGLVLYWLINNLFGIAQQFYINKKIKKSV 513 >gi|256830920|ref|YP_003159648.1| 60 kDa inner membrane insertion protein [Desulfomicrobium baculatum DSM 4028] gi|256580096|gb|ACU91232.1| 60 kDa inner membrane insertion protein [Desulfomicrobium baculatum DSM 4028] Length = 534 Score = 342 bits (877), Expect = 1e-91, Method: Composition-based stats. Identities = 146/564 (25%), Positives = 256/564 (45%), Gaps = 37/564 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ N +A++LS++++ W + P +E P D + Sbjct: 1 MDSNKRVILAVSLSLLVLLGWNYIFPPAPPLETAPQNLSAPNQTAAPASQDAAQVMPSSP 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 S ++ + P IN G + L+ Y + S + L++ ++ Sbjct: 61 TVQFIPSKGEKLSVDTPLYRAVINSSGGVLESFELKEYKETIDPGSKNIDLVT---AQSV 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKI---LTPTTPIKLVFKNANNILFERTISLDE 176 A + + N + W + G + + I+L + +R ++ Sbjct: 118 TKAPMGLIW---NSLPTWAQGEWTVQGGDLDLAAGQSGTIQLSGVVG-GVQMDRVLTFTG 173 Query: 177 H-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y K VTN + Q++ + ++ + + + IA + SL E+ Sbjct: 174 GTYEVKEEVKVTNVTAAQVQGHLAFSVSSVPLTAESDKYNMTK--IAYMAAGSLTEEDSQ 231 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 + W GI Y+ +P+ F L D R A+++ Sbjct: 232 K-DLQIGVESTAPAQWGGIESNYFLLAMVPTSSDMFARA--KLEDNVYRMTV---ADQVL 285 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG + T + G K + KDL + +G+F+ IA+P+ +++ Y Sbjct: 286 LDPGITQLRTVSYYFGPKTEKDLSLMPKDLKGS-----MHYGFFHIIAQPLNQFLNFLYG 340 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+GIAI++ T+ +KLLF+PL+ K Y S MK +QP + ++REK+ + + + Sbjct: 341 YVGNYGIAIIILTIIIKLLFWPLSHKSYKSMEQMKKLQPMMAKIREKYADD-REKMNSEI 399 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +QLYKT+ +NP GC P+LLQIPVFFA+Y+ + ++E+RHA +I L D + Sbjct: 400 MQLYKTYKVNPAGGCVPMLLQIPVFFALYQALLGAIELRHA---AFIPTLPFTDLVWLAD 456 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 L P+Y+ P+IM +MF+Q ++SPP D QA I+ +MPV+F F +FP Sbjct: 457 LSAKDPYYIT--------PLIMGATMFLQQRLSPPMGDPMQAKIMMFMPVIFTFLFLNFP 508 Query: 536 AGLIIYWSWSNVISIVQQAVIMKM 559 +GL++YW +NV+SI QQ+ ++K Sbjct: 509 SGLVVYWLVNNVLSIAQQSYMIKK 532 >gi|213865390|ref|ZP_03387509.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 425 Score = 341 bits (876), Expect = 1e-91, Method: Composition-based stats. Identities = 93/443 (20%), Positives = 177/443 (39%), Gaps = 37/443 (8%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTMQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVS-----TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ N P N + + + + +A F +T Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFV 166 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 Y + +V N + S G++ + T ++ F + G Sbjct: 167 FKRGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTP 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+ + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 227 DEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIV 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLA 428 Q + M+ LYK +NP A Sbjct: 400 DK-QRQSQEMMALYKAEKVNPWA 421 >gi|313672991|ref|YP_004051102.1| membrane protein insertase, yidc/oxa1 family [Calditerrivibrio nitroreducens DSM 19672] gi|312939747|gb|ADR18939.1| membrane protein insertase, YidC/Oxa1 family [Calditerrivibrio nitroreducens DSM 19672] Length = 504 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 155/563 (27%), Positives = 258/563 (45%), Gaps = 65/563 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ +A+A+S++I+ A+Q F+ + + + K DN + + Sbjct: 1 MD--KRTLLAVAISIMILIAYQFFFAPAPMPVAQDNSATLSKDK-----DNVASKSEVKT 53 Query: 61 RAQALSMSPRVELK---NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + S +E++ N + + + +++ Y P+VT + ++ Sbjct: 54 ISNLTTKSKSIEVEKVSNGFVEIYFDKHSGNINKVSVIKYR---DKKLPMVTFKTDNDN- 109 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DE 176 Y LD ++++ K L I NNI +T ++ E Sbjct: 110 --YMKVLDGYGDNYSMDI------------KELDGKKIITFSA-LQNNIGITKTYTIGKE 154 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 YL + V+NNS ++ I + + + EG + G+K E Sbjct: 155 GYLIDLNLKVSNNSDQTVKLEGNIDIGPGFGEGFEKSSYIFEGPMIYNGEKK-EEVAPEK 213 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 I+ + + + W+G + KY+ I K G + +I + Sbjct: 214 IKDTIKLDAPK---WIGYTTKYYLIAAI----DGNLELGKIEKVGESAIVKGVK--QIIL 264 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 P + ++ G KE+ + + L E ID+GWF F+A PM M + Y+ Sbjct: 265 NPKSTSNIKFNIYVGPKEYDLLKSFNLGL-----EHSIDFGWFKFLAVPMLKFMIFIYSF 319 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 N+G+AI++ T+ VKLL +PL K S M+ IQPK+ E++EKFK P Q + AM+ Sbjct: 320 TKNYGVAIIILTIIVKLLTYPLTIKSMTSMKKMQQIQPKLMEIKEKFKNDP-QKMNTAMM 378 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY+ H +NP+ GC P+++QIP+FFA+YK + +S+E++ +PF WI DL+ DP I Sbjct: 379 ELYRKHGVNPMGGCLPMIIQIPIFFALYKALLVSVELKGSPFILWITDLSEKDPYYIT-- 436 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 PIIM ++MFIQ KM+P D Q I MPV+F F SFP+ Sbjct: 437 -----------------PIIMGITMFIQQKMTPSTMDPMQQKIFLMMPVIFTFLFLSFPS 479 Query: 537 GLIIYWSWSNVISIVQQAVIMKM 559 GL+IYW +N++SI+QQ I K Sbjct: 480 GLVIYWLTNNILSIIQQYYINKK 502 >gi|315638576|ref|ZP_07893750.1| inner membrane protein [Campylobacter upsaliensis JV21] gi|315481200|gb|EFU71830.1| inner membrane protein [Campylobacter upsaliensis JV21] Length = 537 Score = 340 bits (873), Expect = 3e-91, Method: Composition-based stats. Identities = 145/584 (24%), Positives = 268/584 (45%), Gaps = 70/584 (11%) Query: 3 RNWNYFVAIALSVIIVYAWQNFY-VYPRIEEMNNERKNIQTVK------QPNQVDNSYAA 55 + +A+ LS I A+ F+ P + E N + N + P ++ + Sbjct: 11 QQKRILLAVVLSFIFFVAYDYFFLPKPNLNEQNITQNNTTKTQNLEANAAPKLQEDLAKS 70 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 V + ++ +++P I+ G + L+ ++ + + L++ Sbjct: 71 VETNGALSSVKSGVLASVESPHFKAEIDTLG-RISSFYLKD-KKYLNEDKSQINLIAKEQ 128 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK--LVFKNANNILFERTIS 173 L+ + ++I T + + ++ T K ++ +N +N+ E+ I+ Sbjct: 129 NPRP----LELRFSNSSINEEAFKTDYKASANELFLDTNESKKLILTQNLSNLKVEKIIT 184 Query: 174 LD--EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 D +Y ++ N + P +P A +++ V G + + + + Sbjct: 185 FDPRGNYEIEVR---LNQNA------PFFITPGFRPSIAVDSYTVH-GALVLDSENTTHT 234 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D++ DK FI S +++ F Y D Sbjct: 235 FEDGDMDMEER------------IDK----AFIASAFDRYYASFFYNFDKPLNLTISKDT 278 Query: 292 NEITILPGKSI-TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 N+ IL + + GAKE + +K R E ++++GWF FIAKPM++ + Sbjct: 279 NDNPILFAYADREFKAGGYIGAKEHEALRAIDK-----RLEDVVEFGWFTFIAKPMYVGL 333 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + + +GN+G AI++ T+ V+++ FPL K +S +K++ PK+ E+RE++K P Q Sbjct: 334 DFLFKHIGNWGWAIVVLTLIVRVILFPLTYKSMISMNKLKDLAPKMKEIRERYKGDP-QK 392 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + M++LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI+DL+A DP Sbjct: 393 MNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLFNAIELKDAPWIFWIQDLSAMDP 452 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PI+M +MF+Q ++P D QA I+ ++PV+F Sbjct: 453 YFIL-------------------PILMGATMFLQQLITPMTIQDPLQAKIMKFLPVIFTI 493 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +FPAGL +YW +N+ S++QQ +I KM E + ++ Sbjct: 494 FFITFPAGLTLYWFINNLCSLLQQWIINKMFEKEHHKRESEKAK 537 >gi|291333888|gb|ADD93569.1| putative inner membrane protein translocase component YidC [uncultured marine bacterium MedDCM-OCT-S04-C293] Length = 526 Score = 340 bits (871), Expect = 5e-91, Method: Composition-based stats. Identities = 134/560 (23%), Positives = 249/560 (44%), Gaps = 58/560 (10%) Query: 25 YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS---------PRVELKN 75 + P EE +E + P + + + + + A S + VE+ N Sbjct: 5 WNPPAQEEAISENTLNNSEYLPTNPISKPNSFVDESSSFAESSNITSLICGAEETVEVSN 64 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 + I+L Q L Y L+++ + TLL K YF + +V + + Sbjct: 65 ENQKLEISLSSGQIIKSELLNYPLEINGQAN--TLLFNKCGKENYFLDGGFVVSGMS-NA 121 Query: 136 PNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIR 195 P N L + ++++ + N + ISL E++ + N ++ Sbjct: 122 PEGNYFSVLSKSE-----DSVEIIRRLPNGSTHSKKISLGENFRINFEEEFFNGEEVEVS 176 Query: 196 FSPRGRIMRHKPQTATNTFGVQE--------GFIAVLGDKSLVEQKYSDIEKSSISNFHE 247 +P +I R +T + + G+ G ++ ++ +S+IE+ Sbjct: 177 VAPYAKINRSSEKTISGSGGIFTQPSSWAYLGPAFSYDGENYDKRSFSEIEEVEFRT-ST 235 Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 S W+ + Y+ + +P++ ++ Q K + + + F + P SI Sbjct: 236 SGGWISMIQHYFLTSLLPNQSSNSLLQGKKNKNDGS-FSVGFVEETKKVAPRNSIKNEYS 294 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 ++G K + DL P+ + ID+G+ Y+I +P+F +M+ + ++G +I+L Sbjct: 295 AYSGPKIKGNL-----DLMHPKLGLAIDYGFLYWIGQPIFWVMNLINQAISSWGWSIVLV 349 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 TV +K+ +PL+ Y + M+ +QPK+ EL+E++ Q + + M+ LY +NP Sbjct: 350 TVLIKIFLWPLSYVAYKNMGKMRQLQPKLKELQERYGDD-RQAMSREMMALYSKEKVNPA 408 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+LLQ+P F A Y V+ ++E+RHAPF WI DL+ DP I Sbjct: 409 LGCLPMLLQMPFFLAFYWVLIETVELRHAPFMFWIVDLSVRDPLFIL------------- 455 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 P++ +M++ + P PA D QA I +MP++F + FPAGL++YW + Sbjct: 456 ------PLLNMGAMYLMQLLQPQPAGVDPMQARIFKFMPIIFGVLFAFFPAGLVLYWLVN 509 Query: 546 NVISIVQQAVIMKMHGAEIG 565 +++S +Q MHG + Sbjct: 510 SLVSALQML----MHGPKKA 525 >gi|114778885|ref|ZP_01453682.1| 60 kDa inner membrane insertion protein [Mariprofundus ferrooxydans PV-1] gi|114550854|gb|EAU53420.1| 60 kDa inner membrane insertion protein [Mariprofundus ferrooxydans PV-1] Length = 435 Score = 340 bits (871), Expect = 5e-91, Method: Composition-based stats. Identities = 145/478 (30%), Positives = 237/478 (49%), Gaps = 48/478 (10%) Query: 87 AQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLIS 146 F + L+ YH+ + + V++LS ++ + + N + TV N + Sbjct: 5 GWFTEAELKQYHVSIEPGAANVSVLSMTDEGRSVYVNSGV----MNRSIQKPFTVLNKSA 60 Query: 147 GKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH 205 + L N ++++R I+L + Y+ I D + + +I +++ Sbjct: 61 N-------TMTLQATLDNGLIWQRKITLAQDSYIVDIEDRILGGAGQKI----YRQVVER 109 Query: 206 KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP 265 P NTF G A+L L E Y D++ SS+ W I ++Y+ + I Sbjct: 110 DPDKKLNTFYEHMGPTALLN-GKLQEPDYKDLDSSSV-RMMAVGGWTAIMNRYFIAALIS 167 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + E + FK DG + YQA + L GK + +F G K + Sbjct: 168 NPEQDYPYYFK--GDGRS-YQAGVIDSGT--LDGKDNLFHSRMFLGPKSLTVLKK----- 217 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 A + I++GWF FI+KPM + + Y VGNFG I+L + +K+LFF +K Y S Sbjct: 218 AGEGLDRSINYGWFAFISKPMHSFLLWLYTYVGNFGFCIILLVLSIKILFFWPTQKSYES 277 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A M+ +QP++ ++E + Q + + M+ LYK H +NP+ GC PI++QIPVFFA+YK Sbjct: 278 MAAMRKLQPEMARMKELYGDD-RQKMSQEMMALYKKHKVNPMGGCLPIIIQIPVFFALYK 336 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 V+ +S+EMR APF GWI D++ DP + P++M +SMF+Q Sbjct: 337 VLLMSIEMRQAPFIGWIHDMSVQDPYFVL-------------------PVLMGISMFVQQ 377 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +++P P D QA ++ ++P VF FPAGL++YW +N +SI+QQ ++MK E Sbjct: 378 RLNPTPPDPMQAKVMQFLPPVFTVLFLFFPAGLVLYWVVNNTLSILQQKLVMKRMNVE 435 >gi|302035743|ref|YP_003796065.1| inner-membrane protein insertion factor OxaA [Candidatus Nitrospira defluvii] gi|300603807|emb|CBK40139.1| Inner-membrane protein insertion factor OxaA [Candidatus Nitrospira defluvii] Length = 580 Score = 339 bits (869), Expect = 9e-91, Method: Composition-based stats. Identities = 154/599 (25%), Positives = 253/599 (42%), Gaps = 86/599 (14%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFY----VYPRIEEMNNERKNIQTVKQ------PNQVD 50 ME V + +S+ ++ + + P E + + Sbjct: 1 ME--KRVIVFLIVSLAVIIGYDYLLKGMGLLPPSEPVQVATNPSPAAETGKPGGGAGDSA 58 Query: 51 NSYAAVLIDD----------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 S +A + A S VE+ + +GA L+ Y Sbjct: 59 KSVSAAPVSSVNGVPASPGNATGAASEEQTVEVDTELFRAKFSNRGAVLKSWELKRYSAA 118 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG-KILTPTTPI-KL 158 V +S V L+ + + L V+ ++ + ++ + L P+ L Sbjct: 119 VEQSSTPVQLVY---SGGRFKGPLSLVTGDQSVTSDLGSALYQVTQDLSHLDSAHPVGHL 175 Query: 159 VF---KNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 F + N+ E+ ++ Y+ I +G TN Sbjct: 176 TFRYHDSQKNVDVEKELTFHHGSYVVDI------------AIRTQGLTTPVDVTLGTNFG 223 Query: 215 GVQ--EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 V+ EGFI ++G SLV+ K + W I DKY+ SV +P K ++ Sbjct: 224 IVEWGEGFIGLMGSASLVDDKVLKETPDGEAERKGDVKWSAIQDKYFLSVLMPQKASA-- 281 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + K D +F+ P T L+AG KE+ T+ E Sbjct: 282 ALAKKEGDKLVSAGVRFAT------PVNGATMAMQLYAGPKEYDTLKRLN-----VGLED 330 Query: 333 LIDWGWFYF--------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 ID+GWF F +AKP+F ++ + Y N+G+ I+L T+ +KL+F PL K Y Sbjct: 331 TIDFGWFVFGSWGLVKAVAKPIFYVLRFLYEFTHNYGVTIILLTMLIKLMFVPLQYKSYK 390 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S M+ IQPK+ L+ KFK + L K +I+LYK H +NP+ GC P++LQ+PVF A++ Sbjct: 391 SMKQMQVIQPKVLALQTKFKDD-RERLNKELIKLYKDHRVNPVGGCLPMVLQMPVFVALF 449 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 ++ +++++R APF WIKDL+ DP + PI+M +M IQ Sbjct: 450 NILYMTIDLRQAPFMLWIKDLSVQDPYYVL-------------------PIVMGATMVIQ 490 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K++P D QA I+ ++PV F +FPAGL++YW +N ++I QQ V ++ G + Sbjct: 491 QKITPTTMDPTQAKIMLFLPVFMTFLFVNFPAGLVLYWLTNNTLTITQQVVTERLFGKK 549 >gi|57242374|ref|ZP_00370313.1| 60 kDa inner-membrane protein [Campylobacter upsaliensis RM3195] gi|57017054|gb|EAL53836.1| 60 kDa inner-membrane protein [Campylobacter upsaliensis RM3195] Length = 537 Score = 339 bits (869), Expect = 1e-90, Method: Composition-based stats. Identities = 144/585 (24%), Positives = 267/585 (45%), Gaps = 72/585 (12%) Query: 3 RNWNYFVAIALSVIIVYAWQNFY-VYPRIEEMNNERKNIQTVK------QPNQVDNSYAA 55 + +A+ LS I A+ F+ P + E N + N + P ++ + Sbjct: 11 QQKRILLAVVLSFIFFVAYDYFFLPKPNLNEQNITQNNTTKTQNLEANAAPKLQEDLAKS 70 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 V + ++ +++P I+ G + L+ ++ + + L++ Sbjct: 71 VETNGALSSVKSGVLASVESPHFKAEIDTLG-RISSFYLKD-KKYLNEDKNQINLIAKDQ 128 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP---TTPIKLVFKNANNILFERTI 172 L+ + ++I T + + ++ + + L +N +N+ E+ I Sbjct: 129 NPRP----LELRFSNSSINEEAFKTDYKTSTNELFLDINESKKLILT-QNLSNLKVEKII 183 Query: 173 SLD--EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 + D +Y ++ N + P +P A +++ V G + + + + Sbjct: 184 TFDPRGNYEIEVR---LNQNA------PFFITPGFRPSIAVDSYTVH-GALVLDSENTTH 233 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + D++ DK FI S +++ F Y D Sbjct: 234 TFEDGDMDMEER------------IDK----AFIASAFDRYYASFFYNFDKPLNLTISKD 277 Query: 291 ANEITILPGKSI-TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 N+ IL + + GAKE + +K R E ++++GWF FIAKPM++ Sbjct: 278 TNDNPILFAYADREFKAGGYIGAKEHEALRAIDK-----RLEDVVEFGWFTFIAKPMYVG 332 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + + +GN+G AI++ T+ V+++ FPL K +S +K++ PK+ E+RE++K P Q Sbjct: 333 LDFLFKHIGNWGWAIVVLTLIVRVILFPLTYKSMISMNKLKDLAPKMKEIRERYKGDP-Q 391 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + M++LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI+DL+A D Sbjct: 392 KMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLFNAIELKDAPWIFWIQDLSAMD 451 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I PI+M +MF+Q ++P D QA I+ ++PV+F Sbjct: 452 PYFIL-------------------PILMGATMFLQQLITPMTIQDPLQAKIMKFLPVIFT 492 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +FPAGL +YW +N+ S++QQ +I KM E + ++ Sbjct: 493 IFFITFPAGLTLYWFINNLCSLLQQWIINKMFEKEHHKRESEKAK 537 >gi|511459|gb|AAA56919.1| 60 kDa inner membrane protein [Coxiella burnetii] Length = 487 Score = 338 bits (868), Expect = 1e-90, Method: Composition-based stats. Identities = 112/490 (22%), Positives = 210/490 (42%), Gaps = 29/490 (5%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA-- 64 VA+ L++ + AWQ Y E+ ++ + +A Sbjct: 10 VIVAL-LAIALFNAWQRDYPPTPKPTPTVEQPTANGDHPTAYTPPAFTPGAAEKTKKAGT 68 Query: 65 ------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + ++ L I+ +G L Y + + V +LS Sbjct: 69 IAFTSKVPEARLITVRTDVLDVEIDTQGGNIVSAKLPKYPVSLEEKQTPVQILSGE-PNE 127 Query: 119 AYFAELDYV---STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 Y A+ ++ + + L +G+ ++L + + +L +T + Sbjct: 128 LYIAQSGLTNGNGQPTTVQFESEKKQYVLENGQ---NQLIVQLTGRAPDGLLVTKTYTFH 184 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD--KSLVEQ 232 Y + V NN+ + S +I R +P T + F V+ A +G + Sbjct: 185 RDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHFYVRSYNGASMGSPQTPYEKL 244 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHARYQAKF 289 Y ++K +I + W+ + Y+ S ++P + + ++ SD Y F Sbjct: 245 SYESLDKQNIDR-TSQSGWIAMQQHYFLSAWVPGNPELTYHYYSHVIPASDEPNVYVVGF 303 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + ++ + G T L+ G + + P E ID+GW + I+ +F + Sbjct: 304 VSPQMNVAAGSEAATHATLYVGPEIAKRLKGL-----APGLERTIDYGWLWPISMLLFWI 358 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S + +V N+G +I++TT+ +K++F+ + K + S A M+ +QP+I L+E+ Q Sbjct: 359 LSAVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARMREMQPRIQALKERHGDD-RQ 417 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L +A ++LY+ INPL GC P+L+Q+PVF A Y VI S+++R APF WI DL+ D Sbjct: 418 ALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIESVQLRQAPFIFWIHDLSVKD 477 Query: 470 PTNIFTLFGI 479 P I L + Sbjct: 478 PYYICPLSWV 487 >gi|33519495|ref|NP_878327.1| putative preprotein translocase subunit YidC [Candidatus Blochmannia floridanus] gi|38502910|sp|Q7U351|OXAA_BLOFL RecName: Full=Inner membrane protein oxaA gi|33517158|emb|CAD83540.1| Preprotein translocase subunit YidC [Candidatus Blochmannia floridanus] Length = 558 Score = 336 bits (863), Expect = 4e-90, Method: Composition-based stats. Identities = 140/560 (25%), Positives = 247/560 (44%), Gaps = 51/560 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME ++F+ + L ++ W+ + I +N E N + QP + + + Sbjct: 1 MESQRSFFIIVFL-IVSFILWKIWDDEHHINLLNIE--NNHSTLQPYSIQSHESNQNTPI 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 S + +K + IN ++ L Y +++S P+ L + K Sbjct: 58 THTNNPYSHIITIKTDVFLLKINTYSGNIEEAYLNNYQENLNSQKPLKLLHTSKENKYQA 117 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTP----------TTPIKLVFKNANNILFER 170 + +++ ++ +L N L L ++ NNI++ + Sbjct: 118 YIDIETLNEYFTNDLNQKNKKHYLYYSNTTNQCEYILKNNENKLQFDLTYQGPNNIIYTK 177 Query: 171 TISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-------FGVQEGFIA 222 L+ + Y I + N S I G +++ + + Sbjct: 178 RYLLNRNDYSIYITYIIDNQSTYPIHIKLYGNLIQSIHSDVIQSKHNDHCPLYTYQEAAY 237 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + DI+ +++ N H +N W+ + KY+ +P YL++ Sbjct: 238 STDTEKYQKYNLKDIKHTNL-NIHSTNGWIALLQKYFIIALLPITPKDNTFYTTYLNN-- 294 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 F ++ I I PGK + L+ G K + L P +++ID+GW +FI Sbjct: 295 HDISIGFKSDFIHIPPGKKNELQSILWMGPKIQDNMK-----LVAPNLDLVIDYGWLWFI 349 Query: 343 AKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + P+F L+ + + + N+GI+I+L TV ++L+ +PL K QY S A ++ +QPK+ ++E Sbjct: 350 SHPLFKLLQFIHTYTIDNWGISIILITVIIRLIMYPLTKAQYTSMAKIRMLQPKLISIQE 409 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 ++K Q QK I+LYK +NPL GC P+L+Q+P+F A+Y ++S S+E+RHA F W Sbjct: 410 EYKHDKYQYHQK-TIELYKKEKVNPLGGCLPLLIQMPIFLALYYMLSESVELRHAKFAFW 468 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL 520 IKDL+ DP I PIIM ++MF K+SP D Q I+ Sbjct: 469 IKDLSDQDPYYIL-------------------PIIMGITMFFIQKLSPTTITDPIQKKIM 509 Query: 521 NWMPVVFVFALSSFPAGLII 540 N M V+F FP+GL++ Sbjct: 510 NIMLVIFTIFFLWFPSGLVL 529 >gi|330721634|gb|EGG99650.1| Inner membrane protein translocase component YidC2C long form [gamma proteobacterium IMCC2047] Length = 345 Score = 332 bits (852), Expect = 8e-89, Method: Composition-based stats. Identities = 116/355 (32%), Positives = 186/355 (52%), Gaps = 28/355 (7%) Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 QT + G + + V+ + DI + W+ I Y+ SV++ Sbjct: 8 DPSQTTSMGMASFLGAATQTVEDNYVKVDFDDIADEPFKE-KNTGGWVAILQHYFVSVWV 66 Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 P+K+ + + S G A + + PG+ T L+AG K + Sbjct: 67 PNKDQQHLYEVRKNSQGENI--AGLVSPATIVHPGQQATVGAQLYAGPKIQDRLEQIS-- 122 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 P E+ ID+G+ +FI +P+F L+S+F++ +GN+G AI+ TT+ +KL FF L+ Y Sbjct: 123 ---PSLELTIDYGFLFFIGQPLFWLLSFFHSFLGNWGWAIIFTTLVIKLAFFHLSATSYK 179 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S ANM+ + P++ ++E+ Q + AM++LYK INPL GC PIL+Q+PVF A+Y Sbjct: 180 SMANMRRVGPEMARIKEQHGSD-RQKMSAAMMELYKKEKINPLGGCLPILVQMPVFIALY 238 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 V+ S+E+R APF WI+DLA DP I PI+M ++M+ Q Sbjct: 239 WVLMESVELRQAPFMFWIEDLAVKDPLFIL-------------------PILMGITMYGQ 279 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++P P D QA ++ +P++F F FP+GL++YW +N++SI QQ VI + Sbjct: 280 QLLNPTPPDPTQAKVMKMLPIMFTFFFLWFPSGLVLYWVANNILSIAQQWVITRK 334 >gi|213580793|ref|ZP_03362619.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 317 Score = 332 bits (851), Expect = 1e-88, Method: Composition-based stats. Identities = 107/344 (31%), Positives = 186/344 (54%), Gaps = 29/344 (8%) Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ + Sbjct: 1 KYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAIGYK 58 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F L+ Sbjct: 59 AQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV-----APHLDLTVDYGWLWFISQPLFKLL 113 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Q Sbjct: 114 KWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QR 172 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP Sbjct: 173 QSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSAQDP 232 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 233 YYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTV 273 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 274 FFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSREKKK 316 >gi|223039678|ref|ZP_03609964.1| inner membrane protein OxaA [Campylobacter rectus RM3267] gi|222879061|gb|EEF14156.1| inner membrane protein OxaA [Campylobacter rectus RM3267] Length = 520 Score = 331 bits (850), Expect = 2e-88, Method: Composition-based stats. Identities = 136/570 (23%), Positives = 246/570 (43%), Gaps = 62/570 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M +A LS I A+ F++ + N+ Q Q N ++ A Sbjct: 5 MSVQKRVILATVLSFIFFIAYDYFFIPKNLPLDQNQTVAAQQTSQANAAPSANTASGASA 64 Query: 61 RAQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTK 117 + S + + K I+ G + L Y +++ + L Sbjct: 65 PQAVATQSREIAVIKGEHFEARIDELG-RISKFYLNDEKYK---NADGERIEL----AGA 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 E+ + A N + ++ + + I L +N + I+ + Sbjct: 117 QPLPLEVRFSDKALNEQAFKVAYASDVSEINLTSEPKSIVLT-QNLEGSSVTKKITFYPN 175 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 + + +V +P + +++ V G + D L + D+ Sbjct: 176 GSYDLDLSV--------SAGEYYVTPGFRPNVSIDSYTVH-GALLKHNDGKLTIIEDGDV 226 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + N SD+Y+ ++F FK+ + + N + + Sbjct: 227 DATESFNNVNI---AAASDRYYTALF-----------FKFDGLLNPVVSKDGAGNAVIFV 272 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G + GAK+ T+ ++L +I++GWF FIAKPMF ++ Y + Sbjct: 273 KG-EQNFKAKGYIGAKDHATLSQINEELV-----DVIEYGWFTFIAKPMFAFLNLLYGYI 326 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G AI++ T+ ++++ FPL K +S +K++ PK+ EL+ K+K P Q L M++ Sbjct: 327 GNWGWAIVVLTLVIRIVLFPLTYKGMLSMNKLKDLAPKVKELQAKYKGDP-QKLNMHMME 385 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK + NP+ GC PIL+QIP+FFAIY+V+ ++E++ AP+ WI DL+ DP + Sbjct: 386 LYKKNGANPMGGCLPILMQIPIFFAIYRVLLNAIELKAAPWILWIHDLSVMDPYFVL--- 442 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 PI+M +MF+Q K++P +D Q I+ ++P++F F +FPA Sbjct: 443 ----------------PILMGATMFLQQKLTPTTFSDPMQEKIMKFLPLIFTFFFVTFPA 486 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 GL +YW +NV S++QQ + K+ + Sbjct: 487 GLTLYWFVNNVCSVIQQIFVNKLFEKHKKV 516 >gi|328952575|ref|YP_004369909.1| Membrane protein oxaA [Desulfobacca acetoxidans DSM 11109] gi|328452899|gb|AEB08728.1| Membrane protein oxaA [Desulfobacca acetoxidans DSM 11109] Length = 566 Score = 330 bits (847), Expect = 3e-88, Method: Composition-based stats. Identities = 134/594 (22%), Positives = 239/594 (40%), Gaps = 63/594 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFY--VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME +A+ +S +I + YP + + Q V+QP + + + Sbjct: 1 ME--KRALLALVISFVIFIGFGYIQQKFYPPSPQKPATQPVEQPVEQPAAPKPAISPSPV 58 Query: 59 DDRAQA------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY--HLDVSSNSPIVTL 110 + + + + P +GA+ L+ Y HL + Sbjct: 59 ATPTTPSTPPTGVQKARDIVVDTPLYQAIFTEQGARLKSFRLKKYWGHLPFQKIADFNLW 118 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI-------------------LT 151 + + ++ + + ++ + LT Sbjct: 119 FFGIDIQRYKRVGNQITDPKELVQATTPDALPLALAWETKAASVGAAEVYQADQKAISLT 178 Query: 152 PTTPIKLVFK--NANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208 KL F N + +T + +++ Y + TV N S + + + + Sbjct: 179 DQDKAKLSFTCVRPNGLTLVKTFTFEQNSYRLDLTATVKNQSSNPLEGDLALSLTDDFSE 238 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH--ESNSWLGISDKYWASVFIPS 266 F GF ++ + S+ W + Y+ +P Sbjct: 239 VKDAGF---TGFAWSA------KKSRDTVASGSLKESKMIGQLDWGSLESSYFMMAVVPP 289 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + F A F ++ PG+ I+ L+ G K+ + L Sbjct: 290 -PSDFKFTATVQDVASKIMTATFRTQVASLPPGQEISLPYTLYFGPKDLDILKSLGLGL- 347 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 E +D+GWF +A P+ ++ +F+ + N+G AI++ T +++LF K Y S Sbjct: 348 ----EQTVDFGWFQILALPLLYVLQFFFKYLHNYGWAIIVMTFLIRVLFLYPNHKSYQSM 403 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 +M+ +QPKI +LREK+K + L K ++ LY+T+ +NP+ GC P++LQ+PVF A+Y + Sbjct: 404 KDMQKLQPKIAKLREKYKDD-REALNKELMGLYRTYKVNPMGGCLPMILQLPVFIALYNI 462 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + ++E+RHAPF I L D + L P + PIIM +MFIQ K Sbjct: 463 LGYAIELRHAPF---ISTLPFTDIVWLADLSAKDPLLIT--------PIIMGATMFIQQK 511 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 M+P P D QA ++ MP++F F +F +GL++YW +NV+SI+QQ K Sbjct: 512 MTPSPGDPTQAKLMLMMPIIFTFMFLNFASGLVLYWLLNNVLSIIQQYYTNKYM 565 >gi|226326926|ref|ZP_03802444.1| hypothetical protein PROPEN_00786 [Proteus penneri ATCC 35198] gi|225204763|gb|EEG87117.1| hypothetical protein PROPEN_00786 [Proteus penneri ATCC 35198] Length = 322 Score = 329 bits (843), Expect = 1e-87, Method: Composition-based stats. Identities = 106/346 (30%), Positives = 194/346 (56%), Gaps = 28/346 (8%) Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 ++ + + DIE ++S +N W+ + +Y+A+ ++PSK++ + + + + Sbjct: 4 TIKKYSFGDIEDKNLS-LTTNNGWVAMLQQYFATAWVPSKDSQNNQFYTITLENKSIALI 62 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + +TI P + ++ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 63 GYKSAPVTIAPNSTADISSTLWVGPEIQSEMSAI-----APHLDLSVDYGWLWFISQPLF 117 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ LRE+ Sbjct: 118 KLLKFLHSFIGNWGFSIIMITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAALRERIGDDK 177 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI+DL+A Sbjct: 178 -QRMSQEMMALYKQEKVNPLGGCLPLIIQMPIFLALYYMLMGSVELRHAPFMLWIQDLSA 236 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I P++M ++MFI K+SP D Q I+ +MPVV Sbjct: 237 QDPYYIL-------------------PLLMGVTMFIIQKLSPTAVTDPMQQKIMTFMPVV 277 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 F FP+GL++Y+ SN+++I+QQ +I + + GL R + Sbjct: 278 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKRGLHSRDKK 322 >gi|90408841|ref|ZP_01216983.1| tRNA modification GTPase [Psychromonas sp. CNPT3] gi|90310068|gb|EAS38211.1| tRNA modification GTPase [Psychromonas sp. CNPT3] Length = 331 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 113/352 (32%), Positives = 183/352 (51%), Gaps = 29/352 (8%) Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 G + + K+ D++ +++ W+ + Y+ + +IPS + + Sbjct: 2 MMSAYRGGAFSTTETRYGKYKFDDMQDAALKE-TTKGGWVAMLQHYFVAAWIPSVDDTNV 60 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + F A T+ T + L+ G K + ++ Sbjct: 61 LYSNVIR--GTDAAIGFKAPVQTVEAHSEKTISADLWVGPKLQDEMAEV-----ASHLDL 113 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +D+GW +FIA+P+F L+ +F +VGN+G+AI+L T VK +PL K QY S A M+ + Sbjct: 114 TVDYGWLWFIAQPLFKLLLFFQGIVGNWGVAIILITFTVKGALYPLTKAQYTSMAKMRLL 173 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPKI ELRE++K Q + K+M++LYK +NPL GC+PILLQ+P+F A+Y + +++ Sbjct: 174 QPKIKELRERYKDD-RQKISKSMMELYKKEKVNPLGGCFPILLQMPIFIALYWSLMEAVQ 232 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511 +RHAPF WI+DL+ DP I PI+M +SMF KMSP Sbjct: 233 LRHAPFVLWIQDLSVQDPYYI-------------------MPILMGVSMFFIQKMSPTQV 273 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D Q I+ +MP++F F FPAGL++YW SN+++++QQ +I + + Sbjct: 274 EDPMQQKIMKFMPIIFTFFFLWFPAGLVLYWLMSNIVTLIQQTIIFRQFEKQ 325 >gi|317051002|ref|YP_004112118.1| membrane protein insertase, YidC/Oxa1 family [Desulfurispirillum indicum S5] gi|316946086|gb|ADU65562.1| membrane protein insertase, YidC/Oxa1 family [Desulfurispirillum indicum S5] Length = 519 Score = 327 bits (839), Expect = 3e-87, Method: Composition-based stats. Identities = 164/578 (28%), Positives = 261/578 (45%), Gaps = 76/578 (13%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV----YPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ +AI LS I+++++Q F++ P + + T++ P Q D A Sbjct: 1 MDN--KMVLAIVLSAIVLFSYQIFFIEMDEPPLPVDGAPAKVAEPTLQAPAQNDAVPALP 58 Query: 57 LID------------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 D++ + V L+N +I + + G L L+ + D Sbjct: 59 ATQFSSSPSLDQGLSDQSLRIVDGRDVVLENDLIIATFSTSGGHLQSLRLKEHQED-GRG 117 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +V ++ + Y A ++T NI+L + +T T + Sbjct: 118 GAMVEMI-----RAGYPAFTSVIATPTGNIDLAGLPFTVEQQTDNSVTFHTLLP------ 166 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + + +L Y F I + + + EG + Sbjct: 167 DGRDVRKQYTLSGAYEFSIRYDME---CAPGACAAVTTLPVEIVANVKGDTFSFEGIVHG 223 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 D L + KYSD+ S + + G+ DKY+ F+PS + + F+ D Sbjct: 224 SADAGLDKIKYSDV---SAVRDIRNIGYGGVMDKYFLIAFLPSPQDT----FRLFPDIPQ 276 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 R A S ++ +FAG K + Y+ L+ ID+G+ +A Sbjct: 277 RGAALVSPLGTSV----------TVFAGPKLKGILDTYDVGLS-----QAIDYGFLSILA 321 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+ + +FY+L GN+G+AI+L TV +K++FFPL+ K Y S + + P++ +L+EKF Sbjct: 322 APLMQAIRWFYSLTGNYGVAIILLTVCIKIIFFPLSHKSYKSMKKISVLAPELKKLKEKF 381 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K P Q L A ++LYKTH NPL+GC PIL+QIPVFFA+YK + ++E+RHAPF WI Sbjct: 382 KNDP-QKLNTATMELYKTHKANPLSGCLPILVQIPVFFALYKTLMNAIELRHAPFALWIN 440 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+A DP I P+IM +MF+Q KM+P D Q I+ + Sbjct: 441 DLSALDPYYIT-------------------PVIMGATMFLQQKMTPTAMDPLQRKIMLSL 481 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P+VF F +FP+GLI+YW +NV+SI QQ I K Sbjct: 482 PIVFTFLFMTFPSGLILYWIVNNVLSIAQQYYINKRPD 519 >gi|255321601|ref|ZP_05362759.1| inner membrane protein OxaA [Campylobacter showae RM3277] gi|255301457|gb|EET80716.1| inner membrane protein OxaA [Campylobacter showae RM3277] Length = 520 Score = 326 bits (837), Expect = 5e-87, Method: Composition-based stats. Identities = 134/564 (23%), Positives = 240/564 (42%), Gaps = 58/564 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M +A LS I A+ F++ + N+ +Q Q N ++ A Sbjct: 5 MSVQKRVLLATVLSFIFFIAYDYFFIPKNLPTDQNQTVAVQQSSQANAAPSANTASATGA 64 Query: 61 RAQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + S + + K I+ G + L + + I Sbjct: 65 PQAVTTQSREIAVIKGEHFEARIDELG-RISKFYLNDEKYKNAEGNRIEL-----AGAQP 118 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 E+ + A N + ++ + + I L +N + I+ + Sbjct: 119 LPLEVRFSDKALNEQAFKVAYTSDVGEINLASEPKSIVLT-QNLEGSSVTKKITFYPNGS 177 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + + +V +P A +++ V G + D L + D++ Sbjct: 178 YDLDLSV--------SAGEYYVTPGFRPSVAIDSYTVH-GALLKHNDGKLTIIEDGDVDA 228 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + N SD+Y+ ++F FK+ + + N + + G Sbjct: 229 TESFNNVNI---AAASDRYYTALF-----------FKFDGLLNPVVSKDGAGNAVIFVKG 274 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + GAK+ T+ ++L +I++GWF FIAKPMF +++ Y +GN Sbjct: 275 -EQNFKAKGYIGAKDHATLSQINEELV-----DVIEYGWFTFIAKPMFAFLNWLYGYIGN 328 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI++ T+ V++ K +S +K++ PK+ EL+ K+K P Q L M++LY Sbjct: 329 WGWAIVVLTLTVRIALSWFTYKGMLSMNKLKDLAPKVKELQAKYKGDP-QKLNMHMMELY 387 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K + NP+ GC PIL+QIP+FFAIY+V+ ++E++ AP+ WI DL+ DP + Sbjct: 388 KKNGANPMGGCLPILMQIPIFFAIYRVLLNAIELKAAPWILWIHDLSVMDPYFVL----- 442 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538 PI+M +MF+Q K++P +D Q I+ ++P++F F +FPAGL Sbjct: 443 --------------PILMGATMFLQQKLTPTTFSDPMQEKIMKFLPLIFTFFFVTFPAGL 488 Query: 539 IIYWSWSNVISIVQQAVIMKMHGA 562 +YW +NV S++QQ + K+ Sbjct: 489 TLYWFVNNVCSVIQQVFVNKLFEK 512 >gi|154174780|ref|YP_001408435.1| putative inner membrane protein translocase component YidC [Campylobacter curvus 525.92] gi|112802923|gb|EAU00267.1| inner membrane protein OxaA [Campylobacter curvus 525.92] Length = 518 Score = 326 bits (835), Expect = 9e-87, Method: Composition-based stats. Identities = 133/573 (23%), Positives = 245/573 (42%), Gaps = 66/573 (11%) Query: 1 MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ +A LS + A+ F++ P+ + R N +S +A + Sbjct: 1 MDKLSTQKRVLIATLLSFLFFIAYDYFFI-PKSMPIEQNRSVNVAQNSSNATPSSQSANV 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL--RGYHLDVSSNSPIVTLLSPSN 115 + + + ++K + I+ G + L + Y N +T +SP Sbjct: 60 TANTDPSQNTKILAKIKGQNYEAQIDELG-RISKFYLTEKKY-ETADGNKTELTGISPLP 117 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + + D + + + L + + I L +N + + + I+ Sbjct: 118 LEMRF---SDAAINDQAFRVSYTADISELDAS---SGAKTINLT-QNLDGLSVTKKITF- 169 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 V N + +P + +++ + G + + D L + Sbjct: 170 ---YPDGRYEVEVNLSKNVE---YFITPGFRPNISVDSYTIH-GALLMHADDKLSILEDD 222 Query: 236 DIE-KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ S+ SD+Y + + F + + Sbjct: 223 DLDGTEKFSDITV----AAASDRY------------YTALFYSFGKPLDVVMSTDAKKNA 266 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I ++ + G K+ + + PR +I++GWF FIAKPMF + + + Sbjct: 267 IIFVKQNGNFKTSGYIGPKDHKILSSMD-----PRLTDIIEYGWFTFIAKPMFAFLDFLH 321 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +GN+G AI++ T+ ++++ FPL K +S +K + PK+ E++ K+K P Q L Sbjct: 322 KYIGNWGWAIVVLTLVIRIILFPLTYKGMLSMNKLKELAPKVKEIQAKYKGDP-QKLNTH 380 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK + NP+ GC PILLQIPVFFAIY+V+ ++E++ AP+ WI DL+A DP I Sbjct: 381 MMELYKKNGANPMGGCLPILLQIPVFFAIYRVLLNAIELKGAPWILWIHDLSAMDPFFIL 440 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 PI+M +MF+Q +++P D Q I+ ++P++F F + Sbjct: 441 -------------------PILMGATMFLQQRLTPTTFTDPMQEKIMKYLPLIFTFFFVT 481 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 FPAGL +YW +NV S++QQ + K+ + Sbjct: 482 FPAGLTLYWFVNNVCSVIQQIFVNKLFEKHKKV 514 >gi|157164729|ref|YP_001466647.1| putative inner membrane protein translocase component YidC [Campylobacter concisus 13826] gi|157101469|gb|EAT97433.2| inner membrane protein OxaA [Campylobacter concisus 13826] Length = 517 Score = 325 bits (832), Expect = 2e-86, Method: Composition-based stats. Identities = 141/566 (24%), Positives = 249/566 (43%), Gaps = 65/566 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M +A LS++ + F P+ + + I + +Q +A Sbjct: 4 MSMQKRLLLAALLSIVFFIVYDFF--MPKRAPLEQNQTTIS--QTMDQSKAPASANDTPK 59 Query: 61 RAQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTK 117 + L+ + + +K S I+ G + L Y + + +V ++ Sbjct: 60 SNENLASNEIIATIKGQSYEAKIDKLG-RIAKFYLTEDKYKTEDGNKIELV-------SQ 111 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 N EL + + N + ++ + IKL +N + + + I + Sbjct: 112 NPLPLELRFNDSTLNADAFKVAYSSDVSEIDASSEPKTIKLT-QNLDGVTVTKNIKFYPN 170 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 V N + +P A +++ V G + D SL + D Sbjct: 171 G----RYEVEVNLSKSVD---YFITPGFRPNIAIDSYTVH-GVMLRNTDDSLNIIEDGDA 222 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 ++ SD+Y+ ++F SF+ F+ + D A N + Sbjct: 223 KEVKNYANTTI---AAASDRYYTALFY-----SFNKPFEAVVDKDAN-------NNPIVF 267 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 + + + G KE + + R +I++GWF FIAKPMF +++ +N + Sbjct: 268 VKTNDSLKLGAYIGPKEHKILSSMD-----ERLNDVIEYGWFTFIAKPMFAFLNFLHNYI 322 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G AI++ T+ ++++ FPL K +S +K + PK+ E++ K+K Q +Q M++ Sbjct: 323 GNWGWAIVVLTLVIRIVLFPLTYKGMLSMNKLKELAPKVKEIQTKYKDDK-QKMQVHMME 381 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK H NP+ GC PILLQIPVFFAIY+V+ ++E++ AP+ WI DL+ DP + Sbjct: 382 LYKKHGANPMGGCLPILLQIPVFFAIYRVLLNAIELKGAPWILWIHDLSVMDPYFVL--- 438 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 PI+M L+MF+Q K++P D Q ++ ++P++F F +FPA Sbjct: 439 ----------------PILMGLTMFLQQKLTPTTFTDPMQEKVMKFLPLIFTFFFVTFPA 482 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGA 562 GL +YW +NV S+VQQ + K+ Sbjct: 483 GLTLYWFVNNVCSVVQQVFVNKLFEK 508 >gi|222823561|ref|YP_002575135.1| 60 kDa inner-membrane protein [Campylobacter lari RM2100] gi|222538783|gb|ACM63884.1| 60 kDa inner-membrane protein [Campylobacter lari RM2100] Length = 526 Score = 325 bits (832), Expect = 2e-86, Method: Composition-based stats. Identities = 139/567 (24%), Positives = 252/567 (44%), Gaps = 67/567 (11%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + +A+ LS + + F++ + +NI ++Q N S Sbjct: 6 SQQKRILIAVVLSFLFFVVYDYFFIP----KAPQTEQNITQIEQNNSAPQSTINANTQAP 61 Query: 62 AQALSMSPRVE---LKNPSLIGSINLKGAQFDDLNL--RGYHLDVSSNSPIVTLLSPSNT 116 LS++ + E +K+ I+ G + L Y N + L+ S + Sbjct: 62 KTELSVNQKEEIAVVKSEHFEAHIDSLG-RIAKFYLSDEKYK---DENGKSINLVDTSLS 117 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK-NANNILFERTISLD 175 + I NT + I L+ N NN++ + I+ Sbjct: 118 PLPLEIRF----SDTKINQEAFNTPYTTSQKTINVSDENTTLILTQNLNNLVVTKKITFH 173 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++ + + N S D ++P A +++ V G + + D + + Sbjct: 174 KYGNYDLE---VNLSKDAA----YFITPGYRPNIAVDSYTVH-GVLILDKDDKITMLEDG 225 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D+E + + SD+Y+++ F + K + Sbjct: 226 DVENDESFSNVTL---MAASDRYYSA------------FFYNFEKPLSAVVTKDNHENSI 270 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + S T + G+KE + + + PR + ++++GWF FIAKPM+ + + + Sbjct: 271 VFASASNTFKASGYIGSKEHDILRNID-----PRLDNVVEYGWFTFIAKPMYEFLDFLHG 325 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +GN+G AI++ T+ V+++ FPL K +S +K++ PK+ E+RE++K P Q + M Sbjct: 326 YLGNWGWAIVIMTLIVRIILFPLTYKSMISMNKLKDLAPKMKEIRERYKGDP-QKMNLHM 384 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK H NP++GC PIL+QIP+FFAIY+V+ ++E++ AP+ WI DL+ DP I Sbjct: 385 MELYKKHGANPMSGCLPILIQIPIFFAIYRVLLNAIELKAAPWAFWITDLSVMDPWFIL- 443 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534 PI M L+MFIQ ++P D Q I+ ++P++F F +F Sbjct: 444 ------------------PIFMGLTMFIQQLITPMAIQDPMQEKIMKFLPLIFTFFFLTF 485 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHG 561 PAGL +YW +N+ S++QQ ++ K+ Sbjct: 486 PAGLTLYWCVNNICSLIQQVIVNKLFK 512 >gi|152990628|ref|YP_001356350.1| inner membrane protein translocase component YidC [Nitratiruptor sp. SB155-2] gi|151422489|dbj|BAF69993.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 528 Score = 324 bits (831), Expect = 2e-86, Method: Composition-based stats. Identities = 145/574 (25%), Positives = 252/574 (43%), Gaps = 69/574 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A +S+++ +A+ F++ + ++ + +TV Q + Sbjct: 5 MSTNQRVLLATIISLVVFFAYDFFFMPQQPKQPLENNASTKTVAQATTAAAPMQNSGQNM 64 Query: 61 RAQALSMS-----PRVELKNPSLIGSINLKGAQFDDLNL--RGYHLDVSSNSPIVTLLSP 113 +A S V++ + I+ G + + L + Y + S + L Sbjct: 65 KAPLGKESDKPSQQLVKITSAKFDLFIDNLG-RVSQVILEEKKYKNESGSQ---IKLFDQ 120 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL-FERTI 172 + + N + T + K ++ + P + K + + I Sbjct: 121 NRLPKPLEIRF----SDNALNEKAFKTPYRYDGPKEISLSGPTTITLKQDLGVTEVTKKI 176 Query: 173 SL--DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 ++ D HY I T + SP ++P + + + I D + Sbjct: 177 TVYPDGHYEASITLT---------KSSPYYISPGYRPDVRVDGYTLHGALIKEADDTITI 227 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 D + F ++ D+Y+A+ F L +G +K S Sbjct: 228 ---IEDGDAKGTEVFKKAKIAAAF-DRYYAT------------LFYDLKNGLNVVVSKDS 271 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + S + G KE+ T+ P +I++G+F FIAKPMF + Sbjct: 272 EENPILFVQGSQNFHVDGYFGPKEYETLKAIN-----PELTDVIEYGFFTFIAKPMFKAL 326 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 Y+L+GN+G AI++ T+ ++++ FPL K +S +K++ PKI EL++K+K P Q Sbjct: 327 LALYHLIGNWGWAIVVLTIIIRIILFPLTLKGMLSMQKLKDLAPKIKELQQKYKGDP-QK 385 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 L M+QLYK H NP+ GC P+LLQIPVFFAIY+V+ ++E++ AP+ WI DL++ DP Sbjct: 386 LNAHMMQLYKKHGANPMGGCLPMLLQIPVFFAIYRVLLNAIELKGAPWILWITDLSSKDP 445 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I P++M +M+I K++P D Q I W+P+VF F Sbjct: 446 YFIL-------------------PVLMGATMYIHQKITPTTITDPMQKKIFEWLPIVFTF 486 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +FPAGL +YW +N++SI+QQ ++ K+ A Sbjct: 487 FFLTFPAGLTLYWFVNNILSIIQQLIVNKIFEAR 520 >gi|118474690|ref|YP_891743.1| putative inner membrane protein translocase component YidC [Campylobacter fetus subsp. fetus 82-40] gi|118413916|gb|ABK82336.1| inner membrane protein, 60 kDa [Campylobacter fetus subsp. fetus 82-40] Length = 531 Score = 321 bits (823), Expect = 2e-85, Method: Composition-based stats. Identities = 133/567 (23%), Positives = 244/567 (43%), Gaps = 58/567 (10%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 +A +S++ + F++ R ++N + + + + Sbjct: 8 QKRLLIATVISILFFITYDYFFIPKRTVDINQTASYAEQNSSSANSAPASQDSINASDSA 67 Query: 64 ALSMSP----RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A S V++ + +I+ G + L N ++L+S +++ Sbjct: 68 APVTSNASKNIVQISGKTYNATIDELG-RISSFVLNESKF-KDENDKQISLVSLNHSPLP 125 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 E+ + + N E + + + + L + N + +TI+ Sbjct: 126 L--EIRFSNKDLNEEAFKVAYTSSAETIDVTKSPANVVLT-QALNGVTLTKTITFYPDGA 182 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + + ++ N +P + + V G + D SL + K Sbjct: 183 YDLKVKLSKNED-------YFITPGFRPNVVVDGYTVH-GTLMRKSDGSLEIIEDK---K 231 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + L SD+Y+ + F + Y SA Sbjct: 232 AKGDERFTGVDILANSDRYYTT------------LFYEVDKTLDVYIQNDSAENTLSFVK 279 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 S + + + G K+ + + P +I++GWF FIAKPMF+L+S+ +N +GN Sbjct: 280 SSGSFSTKGYIGPKDHKILKSID-----PNLVDVIEYGWFTFIAKPMFLLLSWLHNYIGN 334 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+ T+ ++++ FPL K VS +K++ PK+ E++ K+K P + L +++LY Sbjct: 335 WGFAIVALTIVIRIVLFPLTYKGMVSMNKLKDLAPKMKEIQAKYKGDPSK-LNAHVMELY 393 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K + NP+ GC PIL+QIP+FFAIY+V+ ++E++ AP+ WIKDLA DP I Sbjct: 394 KKNGANPMGGCLPILIQIPIFFAIYRVLLNAIELKGAPWIFWIKDLAIMDPYFIL----- 448 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538 P++M +MFIQ K++P D Q I+ ++P++F F +FPAGL Sbjct: 449 --------------PVLMGATMFIQQKITPANFTDPMQEKIMKFLPLIFTFFFVTFPAGL 494 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIG 565 +YW +N+ S+ QQ V+ K+ + Sbjct: 495 TLYWFINNLCSVAQQLVVNKIFKKQKE 521 >gi|86150679|ref|ZP_01068900.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596386|ref|ZP_01099623.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 84-25] gi|218562577|ref|YP_002344356.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|38503224|sp|Q9PNX7|OXAA_CAMJE RecName: Full=Inner membrane protein oxaA gi|85838860|gb|EAQ56128.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191227|gb|EAQ95199.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 84-25] gi|112360283|emb|CAL35078.1| putative membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926191|gb|ADC28543.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. jejuni IA3902] gi|315928512|gb|EFV07816.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp. jejuni 305] Length = 528 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 147/568 (25%), Positives = 258/568 (45%), Gaps = 63/568 (11%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 + +A+ +S + + F++ P E N +KN Q N + A Sbjct: 9 QQKRILLAVVISFLFFVIYDYFFIPKQPLKIEQNITQKNQQNTSINNTPNIQNATTNTPS 68 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A S ++++ I+ G + L+ + + L+S N+ Sbjct: 69 AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKD-RKYQNEKGEFINLVSKENSPYPL 126 Query: 121 FAEL-DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DEH 177 D + ++P NL + + + +N + + E+ I+ + Sbjct: 127 EMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLT---QNLSGLKIEKDITFYPKGN 183 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y ++ + N ++P A +++ V G + + +++ K D+ Sbjct: 184 YEIEVKLSKNAN---------YFISPGYRPNIAVDSYTVH-GALVMDNKETIETYKDGDV 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 EK +N S D+Y+A+ F Y D AN+ I+ Sbjct: 234 EKDESANNVVMTS--AF-DRYYAT-------------FFYNFDKPLNVAISKDANQNPIV 277 Query: 298 PGKS-ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 S + G+KE + + PR E ++++GWF FIAKPMF +++ + Sbjct: 278 FAYSDNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHQY 332 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GN+G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K P Q + M+ Sbjct: 333 IGNWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDP-QKMNMHMM 391 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP I Sbjct: 392 ELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFIL-- 449 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 PI+M +MF+Q ++P D QA I+ ++PV+F F +FP Sbjct: 450 -----------------PILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFP 492 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 AGL +YW +N+ S+VQQ VI K+ E Sbjct: 493 AGLTLYWFVNNLCSLVQQWVINKIFAKE 520 >gi|319957040|ref|YP_004168303.1| membrane protein insertase, yidc/oxa1 family [Nitratifractor salsuginis DSM 16511] gi|319419444|gb|ADV46554.1| membrane protein insertase, YidC/Oxa1 family [Nitratifractor salsuginis DSM 16511] Length = 535 Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats. Identities = 143/580 (24%), Positives = 243/580 (41%), Gaps = 81/580 (13%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N +A+ LS +I+ + Y+ P+ + ++ Q Q + A Sbjct: 2 NKRLMIALVLSFVILIGFS--YLMPQHKATVDQNGTAAPSAQAAQHSQAPQAPAPAASGT 59 Query: 64 ALSMSPRV-----------------ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSN 104 A S ++ + + + L+ Y D + Sbjct: 60 APEASAGTAPAAQTAAPVSVDKVISTVETKKYTLKFD-QFGRIVSAVLKEPKYRQD---D 115 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 + L+ P T+ D E+P S + L + + L K Sbjct: 116 GKPLDLIDPKRTRPLEVRFKDPAINKAAFEVPYSASAGTL---DARSGKAVLTLTQKLPQ 172 Query: 165 NILFERTISL--DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 + +T++ + HY K+ + R P H+P+ + + + G + Sbjct: 173 -LTLTKTLTFYPEGHYDLKVELS---------RKVPYFITTGHRPEADHSRYMIVRGVLV 222 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + +++ S D+Y+AS+F F + Sbjct: 223 RNSKGVITTVEDGKADQTVKIPDATILS---SFDRYYASLF-----------FDFKKPFS 268 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 + + + S + + G KE+ + PR I++GWF F+ Sbjct: 269 VIITPDEKKDPLPFVVTDS-SLQLHGYVGPKEWKLFESLD-----PRLTDAIEFGWFTFL 322 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP F +M YN VGN+G AI+L T+ VKL+ FPL+ K +S +K++ PK+ E++EK Sbjct: 323 AKPFFRIMLAIYNFVGNWGWAIVLFTLLVKLVLFPLSYKGLLSMQKLKDLAPKMKEIKEK 382 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +K P ++ Q+ M+ LYK H NP+ GC P+LLQIPVFFA+Y+V+ + E++ AP+ WI Sbjct: 383 YKSDPAKMNQQ-MMALYKKHGANPMGGCLPMLLQIPVFFALYRVLLNADELQGAPWILWI 441 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILN 521 DL+ DP I PI+M ++MFIQ ++P D Q I Sbjct: 442 HDLSRQDPYFIL-------------------PILMGVTMFIQQHITPNTMTDPMQQKIFK 482 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 W PV+ F +FPAGL++YW +N++SI QQ I +++ Sbjct: 483 WFPVIMTFFFLTFPAGLVLYWLTNNILSIAQQYYINRVYD 522 >gi|224418480|ref|ZP_03656486.1| putative inner membrane protein translocase component YidC [Helicobacter canadensis MIT 98-5491] gi|253827793|ref|ZP_04870678.1| putative inner membrane protein translocase component YidC [Helicobacter canadensis MIT 98-5491] gi|313142010|ref|ZP_07804203.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253511199|gb|EES89858.1| putative inner membrane protein translocase component YidC [Helicobacter canadensis MIT 98-5491] gi|313131041|gb|EFR48658.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 536 Score = 317 bits (813), Expect = 3e-84, Method: Composition-based stats. Identities = 137/568 (24%), Positives = 248/568 (43%), Gaps = 61/568 (10%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 +A+ L++ + FY E +IQT + + + Sbjct: 11 QTRIIIAVVLALAFFVPYSYFYAPKPQENNATATSSIQTTQNLPITQEAKPNPTQESAQL 70 Query: 64 ALSMSPRVELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPS--NTKNA 119 + + + + I+ G + + L+ YH ++ + L S N N Sbjct: 71 STTQEIITTINGENFEYQIDRLG-RITQVTLKEEKYH----KDAKNLELFSNDIANQNNP 125 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHY 178 E+ + + N + NT + + I P L N +TI+ + Sbjct: 126 KILEIRFADSMLNQQ--AFNTPYQTSATNIELKDKPQSLTLTQKLENFTLTKTITFHPNG 183 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 L+++ + N I +P +++ V +G I D ++ D + Sbjct: 184 LYEVKVEIPQNYTYFISPGM-------RPSAENDSY-VFKGVIIKEQDGTIT--TIEDGD 233 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 S SNF S S L D+Y+ ++F F ++ +A + N + L Sbjct: 234 SSGQSNFTNS-SILAAVDRYYTTLF-----------FSQSNNLNAIVLSNAEENPMPFLS 281 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 + G K++ + P ++++G F AKP+F+L+ Y+ G Sbjct: 282 AN-GNIELSGYIGPKDYRLLESIN-----PNLTEVVEYGIITFFAKPLFLLLETLYDWCG 335 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G AI+L T+ V+++ +PL K VS +K + PK+ E+++K+K PQ LQ M++L Sbjct: 336 NWGWAIILLTLIVRVVLYPLTYKGMVSMQKLKELAPKMKEIQQKYKG-EPQKLQVHMMEL 394 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK H NP+ GC P+LLQ+PVFFAIY+V+ ++E++ A + WI+DL+ DP + Sbjct: 395 YKKHGANPMGGCLPLLLQMPVFFAIYRVLYNAIELKGAAWLLWIQDLSVMDPYFVL---- 450 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 PI+M ++M++Q ++P D Q I ++P++F +FP+G Sbjct: 451 ---------------PILMGITMYLQQHLTPTTFNDPIQEKIFKFLPLIFTIFFVTFPSG 495 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIG 565 L++YW +N+ SI+QQ +I K + Sbjct: 496 LVLYWFVNNIFSILQQLLINKALERKKA 523 >gi|291278771|ref|YP_003495606.1| preprotein translocase YidC subunit [Deferribacter desulfuricans SSM1] gi|290753473|dbj|BAI79850.1| preprotein translocase YidC subunit [Deferribacter desulfuricans SSM1] Length = 504 Score = 317 bits (813), Expect = 3e-84, Method: Composition-based stats. Identities = 142/561 (25%), Positives = 248/561 (44%), Gaps = 59/561 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ +A+ LS++++ +Q Y P + +E K ++ N+ + Sbjct: 1 MD--KRTLIAVLLSILVLMIFQFMYT-PSQAPVVSENKTAESTPNVNKEPEKIDLNIAQK 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + E+ + S + + Y N I ++ KN Sbjct: 58 SNEKSFKPDVFEVSTDYVSISFDKNSGDVYSAAILKYR-----NKDIGKVVFKDGEKNYL 112 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 + L +NL GK T V ++ ++ + ++ YL Sbjct: 113 SID----------NLNYDKVEYNLEKGKDNTIVNFNCFVGD----VVITKSYRISNKKYL 158 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 ++N ++ I + + EG I G K E+ Sbjct: 159 IDYYLKISNTGDKTVKLPLTITIGPDFGEGFEKSKYAFEGPIIFDGKKVYKERPDK---- 214 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 W+G + KY+ T+ + + ++ N I + P Sbjct: 215 VKKDVVVNKPLWIGYTTKYFLF------STATNFEKGFIKKYKDSAIVGGEINYI-LNPR 267 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 ++ LF G KE+ + + +FE I++G F F+A PM +L++ FY+ + N Sbjct: 268 ETKQLKLALFTGPKEYKLLKS-----SGYKFEKSINFGIFSFLAIPMLLLLNMFYSFLHN 322 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G+AI+L T+ +K++ +PL K S M+ IQP+I ++REKFK P Q + AM++LY Sbjct: 323 YGVAIILLTIIIKIVTYPLTLKSMTSMKKMQLIQPEIQKIREKFKGDP-QKMNAAMMELY 381 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K + +NP+ GC P+L+QIP+FFA+YK + +S+E++ +PF+GWI DL+ DP I Sbjct: 382 KKYGVNPMGGCLPMLIQIPIFFALYKALLVSIELKGSPFFGWITDLSMKDPYYIT----- 436 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 PI+M ++MFIQ KM+P D Q + +MP++F F +FP+GL+ Sbjct: 437 --------------PILMGITMFIQQKMTPQAGDPTQQKLFMFMPIIFTFLFLNFPSGLV 482 Query: 540 IYWSWSNVISIVQQAVIMKMH 560 IYW +N+++I+QQ I K Sbjct: 483 IYWLTNNILTIIQQYFINKKT 503 >gi|34557650|ref|NP_907465.1| putative inner membrane protein translocase component YidC [Wolinella succinogenes DSM 1740] gi|38502880|sp|P60037|OXAA_WOLSU RecName: Full=Inner membrane protein oxaA gi|34483367|emb|CAE10365.1| 60 KDA INNER-MEMBRANE PROTEIN [Wolinella succinogenes] Length = 536 Score = 315 bits (808), Expect = 1e-83, Method: Composition-based stats. Identities = 132/565 (23%), Positives = 234/565 (41%), Gaps = 67/565 (11%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVY----PRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 +A A+S++ + F+ P E + ER Q Q + + Sbjct: 11 QMRILIATAISLLFFIPYSYFFAPVKEAPLKESTSMERAEQQAAPQTSSSPKEGQVSSVA 70 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + S ++ I+ G + + L+ ++ + Sbjct: 71 MAETSPSKDIIATVQGSHFRLEIDSLG-RIAQVYLK--------DAKFLKEQKELPLLAP 121 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTP--TTPIKLVFKNA-NNILFERTISL-- 174 + ++ + S + L TP L + ++ Sbjct: 122 LSSLRPLEVRFSDATTNKEAFAKSYYSDRDLVEIRNTPETLTLTQELEGFKLTKKLTFYP 181 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 D +Y ++ T+ S + SP R A + G + ++ + Sbjct: 182 DGNYDLEVE---TSGSQKRFFLSPGAR------PIAESDKFAFNGVVLKESGGTIHTTED 232 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D +K I E ++ D+Y+ ++F + ++ + + Sbjct: 233 GDAKKDEI---FEGARFVASVDRYYTTLFFVKEPQGLRVVISKNAEKNPE-------PFV 282 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 L ++ + GAK+F + P ++++G+ F AKP+F+L+ + Y Sbjct: 283 EALDHLKLSG----YIGAKDFRLLESIY-----PSLTDVVEYGFITFFAKPLFLLLDWLY 333 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 GN+G AI+L T+ V+++ FPL K VS +K+I PK+ E++EK+K P Q LQ Sbjct: 334 KFCGNWGWAIVLLTLVVRIILFPLTYKGMVSMQKLKDIAPKMKEIQEKYKGDP-QKLQVH 392 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK H NP+ GC P+LLQ+P+FFAIY+V+ ++E++ A + WI DL+ DP I Sbjct: 393 MMELYKKHGANPMGGCLPLLLQMPIFFAIYRVLYNAIELKGADWILWINDLSVMDPYFIL 452 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 PI+M SMF+Q ++P D Q + ++P++F F + Sbjct: 453 -------------------PILMGASMFLQQHLTPTTFTDPMQEKVFKFLPLIFTFFFVT 493 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++YW SNV SI QQ I K Sbjct: 494 FPSGLVLYWFVSNVFSIAQQLFINK 518 >gi|157415220|ref|YP_001482476.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. jejuni 81116] gi|157386184|gb|ABV52499.1| 60 kDa inner-membrane protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747862|gb|ADN91132.1| Inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni M1] gi|315932545|gb|EFV11478.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp. jejuni 327] Length = 530 Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats. Identities = 141/570 (24%), Positives = 257/570 (45%), Gaps = 67/570 (11%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + +A+ +S + + F++ + ++ + + + Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPS 68 Query: 63 QALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTKN 118 AL V ++++ I+ G + L+ Y + + L+S N+ Sbjct: 69 AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKDKKYQNEKGE---FINLVSKENSPY 124 Query: 119 AYFAEL-DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--D 175 D + ++P NL + + + +N + + E+ I+ Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLT---QNLSGLKIEKDITFYPK 181 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 +Y ++ + N ++P A +++ V G + + +++ K Sbjct: 182 GNYEIEVKLSKNAN---------YFISPGYRPNIAVDSYTVH-GALVMDNKETIETYKDG 231 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D+EK +N S D+Y+A+ F Y D AN+ Sbjct: 232 DVEKDESANNVVMTS--AF-DRYYAT-------------FFYNFDKPLNVAISKDANKNP 275 Query: 296 ILPGKS-ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I+ S + G+KE + + PR E ++++GWF FIAKPMF +++ + Sbjct: 276 IVFAYSDNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLH 330 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +GN+G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K P Q + Sbjct: 331 QYIGNWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDP-QKMNMH 389 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP I Sbjct: 390 MMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFIL 449 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 PI+M ++MF+Q ++P D QA I+ ++PV+F F + Sbjct: 450 -------------------PILMGVTMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFIT 490 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL +YW +N+ S+VQQ VI K+ E Sbjct: 491 FPAGLTLYWFVNNLCSLVQQWVINKIFAKE 520 >gi|57237786|ref|YP_179034.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni RM1221] gi|57166590|gb|AAW35369.1| inner membrane protein, 60 kDa [Campylobacter jejuni RM1221] gi|315058399|gb|ADT72728.1| OxaI/YidC membrane insertion protein [Campylobacter jejuni subsp. jejuni S3] Length = 530 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 141/570 (24%), Positives = 256/570 (44%), Gaps = 67/570 (11%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + +A+ +S + + F++ + ++ + + + Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPS 68 Query: 63 QALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTKN 118 AL V ++++ I+ G + L+ Y + + L+S N+ Sbjct: 69 AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKDKKYQNEKGE---FINLVSKENSPY 124 Query: 119 AYFAEL-DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--D 175 D + ++P NL + + + +N + + E+ I+ Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLT---QNLSGLKIEKDITFYPK 181 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 +Y ++ + N ++P A +++ V G + + +++ K Sbjct: 182 GNYEIEVKLSKNAN---------YFISPGYRPNIAVDSYTVH-GALVMDNKETIETYKDG 231 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D+EK +N S D+Y+A+ F Y D AN+ Sbjct: 232 DVEKDESANNVVMTS--AF-DRYYAT-------------FFYNFDKPLNVAISKDANQNP 275 Query: 296 ILPGKS-ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I+ S + G+KE + + PR E ++++GWF FIAKPMF +++ + Sbjct: 276 IVFAYSDNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLH 330 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +GN+G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K P Q + Sbjct: 331 QYIGNWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDP-QKMNMH 389 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP I Sbjct: 390 MMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFIL 449 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 PI+M +MF+Q ++P D QA I+ ++PV+F F + Sbjct: 450 -------------------PILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFIT 490 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL +YW +N+ S+VQQ VI K+ E Sbjct: 491 FPAGLTLYWFVNNLCSLVQQWVINKIFAKE 520 >gi|86150951|ref|ZP_01069167.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 260.94] gi|86152990|ref|ZP_01071195.1| inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613009|ref|YP_001000640.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. jejuni 81-176] gi|167005567|ref|ZP_02271325.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. jejuni 81-176] gi|85842121|gb|EAQ59367.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 260.94] gi|85843875|gb|EAQ61085.1| inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni HB93-13] gi|87248917|gb|EAQ71880.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 81-176] Length = 528 Score = 314 bits (805), Expect = 3e-83, Method: Composition-based stats. Identities = 141/570 (24%), Positives = 256/570 (44%), Gaps = 67/570 (11%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + +A+ +S + + F++ + ++ + + + Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPS 68 Query: 63 QALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTKN 118 AL V ++++ I+ G + L+ Y + + L+S N+ Sbjct: 69 AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKDKKYQNEKGE---FINLVSKENSPY 124 Query: 119 AYFAEL-DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--D 175 D + ++P NL + + + +N + + E+ I+ Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLT---QNLSGLKIEKDITFYPK 181 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 +Y ++ + N ++P A +++ V G + + +++ K Sbjct: 182 GNYEIEVKLSKNAN---------YFISPGYRPNIAVDSYTVH-GALVMDNKETIETYKDG 231 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D+EK +N S D+Y+A+ F Y D AN+ Sbjct: 232 DVEKDESANNVVMTS--AF-DRYYAT-------------FFYNFDKPLNVAISKDANKNP 275 Query: 296 ILPGKS-ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I+ S + G+KE + + PR E ++++GWF FIAKPMF +++ + Sbjct: 276 IVFAYSDNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLH 330 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +GN+G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K P Q + Sbjct: 331 QYIGNWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDP-QKMNMH 389 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP I Sbjct: 390 MMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFIL 449 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 PI+M +MF+Q ++P D QA I+ ++PV+F F + Sbjct: 450 -------------------PILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFIT 490 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL +YW +N+ S+VQQ VI K+ E Sbjct: 491 FPAGLTLYWFVNNLCSLVQQWVINKIFAKE 520 >gi|57167877|ref|ZP_00367017.1| 60 kDa inner-membrane protein [Campylobacter coli RM2228] gi|57020999|gb|EAL57663.1| 60 kDa inner-membrane protein [Campylobacter coli RM2228] Length = 531 Score = 314 bits (804), Expect = 3e-83, Method: Composition-based stats. Identities = 136/574 (23%), Positives = 252/574 (43%), Gaps = 71/574 (12%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ-----VDNSYAAVL 57 + +A+ +S + + F++ + ++ Q Q N A + Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQQIKLEQNITTTQADSQNATNINAPQQNPQANLN 68 Query: 58 IDDRAQALSMSPRVE-LKNPSLIGSINLKGAQFDDLNL--RGYHLDVSSNSPIVTLLSPS 114 + + + + +K+ I+ G + + L + Y + + L+S Sbjct: 69 VAATSNTIPQDKIIADIKSEHFEAQIDSLG-RIVNFYLQDKKYQNEKGE---AINLISKG 124 Query: 115 NTKNAYFAEL-DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 N D +P + + + + + T + + ++++ E+ I+ Sbjct: 125 NLPYPLEMRFSDPAINTQAFSVPYAADMSEVFIDENGSKTLKLT---QQLSDLIVEKKIT 181 Query: 174 L--DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 +Y ++ + N ++P A +++ V V+ D+ + Sbjct: 182 FYSKGNYDIEVKLSKNIN---------YFISPGYRPSIAVDSYTVH--GALVMDDQETI- 229 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 Y D + N ++ S +++ F Y + A Sbjct: 230 HTYEDGDMDKDENIKN--------------AWMTSAFDRYYAAFFYNFEKPLNVTISKDA 275 Query: 292 NEITILPGKS-ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 ++ S + G KE + + PR E ++++GWF FIAKPMF + Sbjct: 276 QNNPLVFAMSDNEFKAGGYMGPKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFL 330 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++ +N +GN+G AI++ + ++++ FPL K +S +K++ PK+ ELRE++K P Q Sbjct: 331 NFLHNHIGNWGWAIVIMVLIIRIILFPLTYKSMISMNKLKDLAPKMKELRERYKGDP-QK 389 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + M++LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 390 MNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDP 449 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PI+M ++MFIQ ++P D QA I+ ++P++F F Sbjct: 450 YFIL-------------------PILMGVTMFIQQLITPMTIQDPMQAKIMKFLPIIFTF 490 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +FPAGL +YW +N+ S+VQQ VI KM E Sbjct: 491 FFITFPAGLTLYWFVNNLCSLVQQWVINKMFAKE 524 >gi|305432097|ref|ZP_07401264.1| inner membrane protein [Campylobacter coli JV20] gi|304445181|gb|EFM37827.1| inner membrane protein [Campylobacter coli JV20] Length = 531 Score = 313 bits (803), Expect = 4e-83, Method: Composition-based stats. Identities = 136/574 (23%), Positives = 252/574 (43%), Gaps = 71/574 (12%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ-----VDNSYAAVL 57 + +A+ +S + + F++ + ++ Q Q N A + Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQQIKLEQNITTTQADSQNATNINAPQQNPQANLN 68 Query: 58 IDDRAQALSMSPRVE-LKNPSLIGSINLKGAQFDDLNL--RGYHLDVSSNSPIVTLLSPS 114 + + + + +K+ I+ G + + L + Y + + L+S Sbjct: 69 VAATSNTIPQDKIIADIKSEHFEAQIDSLG-RIVNFYLQDKKYQNEKGE---AINLISKG 124 Query: 115 NTKNAYFAEL-DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 N D +P + + + + + T + + ++++ E+ I+ Sbjct: 125 NLPYPLEMRFSDPAINTQAFSVPYAADMSEVFIDENGSKTLKLT---QQLSDLIVEKKIT 181 Query: 174 L--DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 +Y ++ + N ++P A +++ V V+ D+ + Sbjct: 182 FYSKGNYDIEVKLSKNIN---------YFISPGYRPSIAVDSYTVH--GALVMDDQETI- 229 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 Y D + N ++ S +++ F Y + A Sbjct: 230 HTYEDGDMDKDENIKN--------------AWMTSAFDRYYAAFFYNFEKPLNVTISKDA 275 Query: 292 NEITILPGKS-ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 ++ S + G KE + + PR E ++++GWF FIAKPMF + Sbjct: 276 QNNPLVFVMSDNEFKAGGYMGPKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFL 330 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++ +N +GN+G AI++ + ++++ FPL K +S +K++ PK+ ELRE++K P Q Sbjct: 331 NFLHNHIGNWGWAIVIMVLIIRIILFPLTYKSMISMNKLKDLAPKMKELRERYKGDP-QK 389 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + M++LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 390 MNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDP 449 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PI+M ++MFIQ ++P D QA I+ ++P++F F Sbjct: 450 YFIL-------------------PILMGVTMFIQQLITPMTIQDPMQAKIMKFLPIIFTF 490 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +FPAGL +YW +N+ S+VQQ VI KM E Sbjct: 491 FFITFPAGLTLYWFVNNLCSLVQQWVINKMFAKE 524 >gi|317010178|gb|ADU80758.1| putative inner membrane protein translocase component YidC [Helicobacter pylori India7] Length = 546 Score = 313 bits (802), Expect = 5e-83, Method: Composition-based stats. Identities = 146/601 (24%), Positives = 253/601 (42%), Gaps = 84/601 (13%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNER---KNIQTVKQPNQVDNSY 53 M++N N +AIALS + + + F+ P + N T PN + Sbjct: 1 MDKNNNTNTRLILAIALSFLFITLYSYFFQKPNKTTTQTTKQETANNHTTTSPNTPNAFN 60 Query: 54 AAVLIDDRAQALSMS---PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT- 109 A I ++S R+E+ + + + L+ + Sbjct: 61 ATQTIPQENLLSTISFEHARIEIDSL----------GRIKQVYLKDKKYLTPKEKGFLEH 110 Query: 110 ---LLSPSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTP 155 L SP EL ++ L NT ++ S L P Sbjct: 111 VGHLFSPKANPQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQ 169 Query: 156 IKLVFKNANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + L + +T++ + HY +I +NN ++P ++ Sbjct: 170 LVLTQDLGA-LTIIKTLTFYDDLHYDLQIAFKSSNN-----IIPSYVITNGYRPVADLDS 223 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + G + DK + + + D ++ I F + +L D+Y+ ++ F + Sbjct: 224 Y-TFSGVLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTENPQGFEA 279 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 S+ + F + + G K++ ++ P + Sbjct: 280 LID--SEIGTKNPLGFIS--------FKNEANLHGYIGPKDYRSLKAIS-----PMLTDV 324 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I++G F AK +F L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K + Sbjct: 325 IEYGLITFFAKGVFALLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELT 384 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E+ Sbjct: 385 PKMKELQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVEL 443 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512 + + + WI DL+ DP I P++M SM+ ++P Sbjct: 444 KSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPNTMT 484 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 485 DPMQAKIFKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQNKK 544 Query: 573 T 573 Sbjct: 545 E 545 >gi|331007812|ref|ZP_08330917.1| OxaI/YidC membrane insertion protein [gamma proteobacterium IMCC1989] gi|330418379|gb|EGG92940.1| OxaI/YidC membrane insertion protein [gamma proteobacterium IMCC1989] Length = 285 Score = 313 bits (802), Expect = 6e-83, Method: Composition-based stats. Identities = 111/310 (35%), Positives = 180/310 (58%), Gaps = 26/310 (8%) Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 + Y+ S ++P+ ET+ + LS G Y FS +T+ G+ + + + G K Sbjct: 1 MIQHYFVSAWVPNSETNNSYSLRKLS-GKDIYLLGFSTPALTVAAGQQGSVSAGFYVGPK 59 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + + P ++ ID+G+ ++IAKP+F L+ +++VGN+G +I++ T+F+K+ Sbjct: 60 DIDRLEAI-----APYLDLTIDFGFLWWIAKPIFHLLIMIHDVVGNWGWSIIVLTLFIKI 114 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 +FF + Y S A M+ + PK+ L+E+F Q + + M+++YKT +NP+ GC PI Sbjct: 115 VFFYPSAVSYRSMARMRKLSPKMALLKERFGDDK-QKMSQEMMKMYKTEKVNPMGGCLPI 173 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+PVF ++Y V+ S+E+RHAPF WI DL+ DP +F Sbjct: 174 LIQMPVFISLYWVLMESVELRHAPFALWITDLSVKDPYFVF------------------- 214 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P+IM ++M+IQ K++P P D QA I+ WMPV F F FPAGL+IYW +N +SI+QQ Sbjct: 215 PLIMGVTMYIQQKLNPTPPDPMQAKIMQWMPVAFTFMFLWFPAGLVIYWVTNNTLSIIQQ 274 Query: 554 AVIMKMHGAE 563 +I + AE Sbjct: 275 YIITRRIEAE 284 >gi|153951835|ref|YP_001397950.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. doylei 269.97] gi|152939281|gb|ABS44022.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. doylei 269.97] Length = 530 Score = 313 bits (801), Expect = 7e-83, Method: Composition-based stats. Identities = 144/570 (25%), Positives = 258/570 (45%), Gaps = 67/570 (11%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP-NQVDNSYAAVLIDDR 61 + +A+ +S + + F++ + ++ N + N Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNIPNIQNTTTNTPS 68 Query: 62 AQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTKN 118 A +S + ++++ I+ G + L+ Y + + L+S N+ Sbjct: 69 AALVSQDSMISKVQSKHFEAQIDSFG-RISAFYLKDKKYQNEKGE---FINLVSKENSPY 124 Query: 119 AYFAEL-DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--D 175 D + ++P + NL + + + +N + + E+ I+ Sbjct: 125 PLEMRFSDPSINSEAFKIPYAANANNLFVDENGSQVLKLT---QNLSGLKIEKDITFYAK 181 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 +Y ++ + N ++P A +++ V G + V +++ K Sbjct: 182 GNYEIEVKLSKNAN---------YFISPGYRPNIAVDSYTVH-GALVVDNKETIETYKDG 231 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D+EK +N S D+Y+A F Y D AN+ Sbjct: 232 DVEKDESANNVVMTS--AF-DRYYA-------------NFFYNFDKPLNVAISKDANKNP 275 Query: 296 ILPGKS-ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I+ S + G+KE + + PR E ++++GWF FIAKPMF +++F+ Sbjct: 276 IVFAYSDNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFFH 330 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +GN+G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K P Q + Sbjct: 331 QYIGNWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDP-QKMNMH 389 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP I Sbjct: 390 MMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFIL 449 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 PI+M +MF+Q ++P D QA I+ ++PV+F F + Sbjct: 450 -------------------PILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFIT 490 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL +YW +N+ S+VQQ VI K+ E Sbjct: 491 FPAGLTLYWFVNNLCSLVQQWVINKIFAKE 520 >gi|283956364|ref|ZP_06373844.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 1336] gi|283792084|gb|EFC30873.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 1336] Length = 528 Score = 312 bits (799), Expect = 1e-82, Method: Composition-based stats. Identities = 141/570 (24%), Positives = 255/570 (44%), Gaps = 67/570 (11%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + +A+ +S + + F++ + ++ + + + Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPS 68 Query: 63 QALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTKN 118 AL V ++++ I+ G + L+ Y + + L+S N+ Sbjct: 69 AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKDKKYQNEKGE---FINLVSKENSPY 124 Query: 119 AYFAEL-DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--D 175 D + + P NL + + + +N + + E+ I+ Sbjct: 125 PLEMRFSDPSINSEAFKFPYIANSSNLFVDENGSQVLKLT---QNLSGLKIEKDITFYPK 181 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 +Y ++ + N ++P A +++ V G + + +++ K Sbjct: 182 GNYEIEVKLSKNAN---------YFISPGYRPNIAVDSYTVH-GALVMDNKETIETYKDG 231 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D+EK +N S D+Y+A+ F Y D AN+ Sbjct: 232 DVEKDESANNVVMTS--AF-DRYYAT-------------FFYNFDKPLNVAISKDANKNP 275 Query: 296 ILPGKS-ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I+ S + G+KE + + PR E ++++GWF FIAKPMF +++ + Sbjct: 276 IVFAYSDNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLH 330 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +GN+G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K P Q + Sbjct: 331 QYIGNWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDP-QKMNMH 389 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP I Sbjct: 390 MMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFIL 449 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 PI+M +MF+Q ++P D QA I+ ++PV+F F + Sbjct: 450 -------------------PILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFIT 490 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL +YW +N+ S+VQQ VI K+ E Sbjct: 491 FPAGLTLYWFANNLCSLVQQWVINKIFAKE 520 >gi|148926121|ref|ZP_01809807.1| putative membrane protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845600|gb|EDK22692.1| putative membrane protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 530 Score = 312 bits (799), Expect = 1e-82, Method: Composition-based stats. Identities = 142/570 (24%), Positives = 256/570 (44%), Gaps = 67/570 (11%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + +A+ +S + + F++ + ++ + + + Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPS 68 Query: 63 QALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTKN 118 AL V ++++ I+ G + L+ Y + + L+S N+ Sbjct: 69 AALVSQDSVISKVQSKHFEVQIDSFG-RISAFYLKDKKYQNEKGE---FINLVSKENSPY 124 Query: 119 AYFAEL-DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--D 175 D + ++P NL + + + +N + + E+ I+ Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLT---QNLSGLKIEKDITFYPK 181 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 +Y ++ + N ++P A +++ V G + + +++ K Sbjct: 182 GNYEIEVKLSKNAN---------YFISPGYRPNIAVDSYTVH-GALVMDNKETIETYKDG 231 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D+EK +N S D+Y+A+ F Y D AN+ Sbjct: 232 DVEKDESANNVVMTS--AF-DRYYAT-------------FFYNFDKPLNVAISKDANQNP 275 Query: 296 ILPGKS-ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I+ S + G+KE + + PR E ++++GWF FIAKPMF +++ Y Sbjct: 276 IVFAYSDNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLY 330 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +GN+G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K P Q + Sbjct: 331 QYIGNWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDP-QKMNMH 389 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP I Sbjct: 390 MMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFIL 449 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 PI+M +MF+Q ++P D QA I+ ++PV+F F + Sbjct: 450 -------------------PILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFIT 490 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL +YW +N+ S+VQQ VI K+ E Sbjct: 491 FPAGLTLYWFVNNLCSLVQQWVINKIFAKE 520 >gi|317013216|gb|ADU83824.1| putative inner membrane protein translocase component YidC [Helicobacter pylori Lithuania75] Length = 546 Score = 311 bits (797), Expect = 2e-82, Method: Composition-based stats. Identities = 144/596 (24%), Positives = 252/596 (42%), Gaps = 80/596 (13%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N N +AIALS + + + F+ P + +N A A Sbjct: 5 NNTNLILAIALSFLFIALYSYFFQKPNKTTTQ--------TTKQETTNNHTATSPNAPNA 56 Query: 63 QALSMSPRVELKNPSLIGS-------INLKGAQFDDLNLRGYHLDVSSNSPIVT----LL 111 Q + + +N S I+ G + + L+ + L Sbjct: 57 QNFGTTQAISQENLLSTISFEHARIEIDSLG-RIKQVYLKDKKYLTPKQKGFLEHVSHLF 115 Query: 112 SPSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVF 160 +P EL ++ L NT ++ S L P + L Sbjct: 116 NPKANPQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLT- 173 Query: 161 KNANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 ++ N + +T++ + HY KI +NN ++P +++ Sbjct: 174 QDLNTLTIIKTLTFYDDLHYDLKIAFKSSNN-----IIPSYVITNGYRPVADLDSY-TFS 227 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G + DK + + + D ++ I F + +L D+Y+ ++ F + Sbjct: 228 GVLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDSQGFEALID-- 282 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 S+ + F + + G K++ ++ P +I++G Sbjct: 283 SEIGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGL 329 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F AK +F+L+ Y Y GN+G AI+L T+ V+L+ +PL+ K VS +K + PK+ E Sbjct: 330 ITFFAKGVFVLLDYLYQFAGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKE 389 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + Sbjct: 390 LQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEW 448 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQA 517 WI DL+ DP I P++M SM+ ++P D QA Sbjct: 449 ILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPNTMTDPMQA 489 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 490 KIFKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545 >gi|261840125|gb|ACX99890.1| putative inner membrane protein translocase component YidC [Helicobacter pylori 52] Length = 544 Score = 310 bits (795), Expect = 3e-82, Method: Composition-based stats. Identities = 143/595 (24%), Positives = 252/595 (42%), Gaps = 74/595 (12%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N +AIALS + + + F+ P + + N+++A Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNQTTTTKQETTNNHTATNSNTLNAFSAT 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLS 112 + LS + I+ G + + L+ + L + Sbjct: 61 QAIPQENLLS-----TISFEHARIEIDSLG-RIKQVYLKDKKYLTPKQKGFLEHVSHLFN 114 Query: 113 PSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVFK 161 P EL ++ L NT ++ S L P + L Sbjct: 115 PKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLTQD 173 Query: 162 NANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + +T++ + HY +I NN ++P +++ G Sbjct: 174 LGA-LTIIKTLTFYDDLHYDLQIAFKSPNN-----IIPSYVITNGYRPVADLDSY-TFSG 226 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + DK + + + D ++ I F + +L D+Y+ ++ F + S Sbjct: 227 VLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDSQGFEALID--S 281 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 + + F + + G K++ ++ P +I++G Sbjct: 282 EIGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLI 328 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL Sbjct: 329 TFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKEL 388 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + Sbjct: 389 QEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWI 447 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAM 518 WI DL+ DP I P++M SM+ ++P D QA Sbjct: 448 LWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPNTMTDPMQAK 488 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 489 IFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQNKKE 543 >gi|298735584|ref|YP_003728107.1| preprotein translocase subunit YidC [Helicobacter pylori B8] gi|298354771|emb|CBI65643.1| preprotein translocase YidC subunit [Helicobacter pylori B8] Length = 544 Score = 310 bits (795), Expect = 4e-82, Method: Composition-based stats. Identities = 143/595 (24%), Positives = 250/595 (42%), Gaps = 80/595 (13%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK---NIQTVKQPNQVDNSYAAVLID 59 N N +AIALS + + + F+ P ++ N T PN + A I Sbjct: 5 NNTNLILAIALSFLFIALYSYFFQKPNKPTTQTTKQETTNNHTATSPNAPNAFSATQTIP 64 Query: 60 DRAQALSMS---PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLS 112 ++S R+E+ + + + L+ + L S Sbjct: 65 QENLLSAISFEHARIEIDSL----------GRIKQVYLKDKKYLTPKQKGFLEHVGHLFS 114 Query: 113 PSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVFK 161 EL ++ L NT ++ S L P + L Sbjct: 115 SKENMQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLTQD 173 Query: 162 NANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 +T++ + HY KI NN ++P +++ G Sbjct: 174 LGA-FTIIKTLTFYDDLHYDLKIAFKSPNN-----LIPSYVITNGYRPVADLDSY-TFSG 226 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + DK + + + D ++ I F + +L D+Y+ ++ F + S Sbjct: 227 VLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEALID--S 281 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 + + F + + G K++ ++ P +I++G Sbjct: 282 EIGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLI 328 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 F AK +F+L+ Y Y VGN+G AI+ T+ V+++ +PL+ K VS +K + PK+ EL Sbjct: 329 TFFAKGVFVLLDYLYQFVGNWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKEL 388 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + Sbjct: 389 QEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWI 447 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAM 518 WI DL+ DP I P++M SM+ ++P D QA Sbjct: 448 LWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPNTMTDPMQAK 488 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 489 IFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRMHAQNKKE 543 >gi|308064207|gb|ADO06094.1| putative inner membrane protein translocase component YidC [Helicobacter pylori Sat464] Length = 547 Score = 310 bits (794), Expect = 5e-82, Method: Composition-based stats. Identities = 146/598 (24%), Positives = 258/598 (43%), Gaps = 77/598 (12%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERK---NIQTVKQPNQVDNSY 53 M++N N +AIALS + + + F+ P ++ N T PN N++ Sbjct: 1 MDKNNNANIRLILAIALSFLFIAIYSYFFQKPNKTTTPTTKQETTNNHTATSPNNTPNAF 60 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT---- 109 +A + LS + I+ G + + L+ + Sbjct: 61 SATQAIPQENLLS-----TISFEHARIEIDSLG-RIKQVYLKDKKYLTPKQKGFLEHVSH 114 Query: 110 LLSPSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKL 158 L +P EL ++ L NT ++ S L P + L Sbjct: 115 LFNPKANPQISLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVL 173 Query: 159 VFKNANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 ++ + + +T++ + HY +I N +KP +++ Sbjct: 174 T-QDLDALTIIKTLTFYDDLHYDLQIAFKSPNK-----IIPSYVITNGYKPVADLDSY-T 226 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G + DK + + + D ++ I F + +L D+Y+ ++ F + Sbjct: 227 FSGVLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEALID 283 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 S+ + F + + G K++ ++ P +I++ Sbjct: 284 --SEIGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEY 328 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ Sbjct: 329 GLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKM 388 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + Sbjct: 389 KELQEKYK-DEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSS 447 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKG 515 + WI DL+ DP I P++M SM+ ++P D Sbjct: 448 EWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPSSVTDPM 488 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 QA + ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 489 QAKLFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQSKKE 546 >gi|154148946|ref|YP_001406234.1| putative inner membrane protein translocase component YidC [Campylobacter hominis ATCC BAA-381] gi|153804955|gb|ABS51962.1| inner membrane protein, 60 kDa [Campylobacter hominis ATCC BAA-381] Length = 532 Score = 310 bits (794), Expect = 5e-82, Method: Composition-based stats. Identities = 148/589 (25%), Positives = 257/589 (43%), Gaps = 76/589 (12%) Query: 1 MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME+ F+A+ L+ A+ FY+ + N Q N+ A V Sbjct: 1 MEQLSVQKRIFIAVLLTFAFFIAYDYFYL----SKFQVPENNATGALIDKQSRNTEALVN 56 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKG----------AQFDDLNLR--GYHLDVSSNS 105 A+ ++P + ++I I KG + + L Y D Sbjct: 57 EAPNAKNDKVAPAKAVNKRNVITQI--KGKIANFSIDDLGRINSYVLNESKYKNDDKMQI 114 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 +V L +K+ E+ + + N + V + + I + L +N + Sbjct: 115 DLVDL-----SKSPLPLEMRFSNPDLNELAFKTPYVASASNLDITKNEQNLVLT-QNLGD 168 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 +L + I+ + +KI + N+ I +P + + V G + Sbjct: 169 VLVTKNITFYPNGSYKISVQLNKNAEFFISPGS-------RPSIVVDGYTVH-GVLIRKD 220 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D+SL + D++ + SD+Y+ + F ++ Sbjct: 221 DESLKMFEDGDVDSNENIQNANI---AAASDRYYTT------------FFYDFTNKLNLV 265 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + S I T F G K + + +K R +I++GWF FI+KP Sbjct: 266 ISSDSDKVSQIFAKADKTFEAGGFIGPKHYDLLTGIDK-----RLSDVIEYGWFTFISKP 320 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 MF + + +N GN+G AI++ T+ V+ + +PL+ K +S MK++ PK+ EL+ ++K Sbjct: 321 MFGFLKWLHNYTGNWGWAIVIMTLIVRAILYPLSYKGMLSMNKMKDLAPKMKELQARYKG 380 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 P + LQ +M++LYK +N+NP+ GC PILLQ+P+FFAIY+V+ ++E++ A + WI DL Sbjct: 381 DP-KKLQTSMMELYKKNNVNPMGGCLPILLQVPIFFAIYRVLLNAIELKGAEWAFWIHDL 439 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 + DP I PI M + MF+Q K++P D Q I+ ++P Sbjct: 440 SVKDPYFIL-------------------PITMGILMFLQQKITPTNFTDPMQEKIMKFLP 480 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++F F +FPAGL +YW+ +N+ SI+QQ I KM I ++ Sbjct: 481 LIFTFFFMAFPAGLTLYWTVNNLASIIQQYTINKMFAKHKAAIKEEKNE 529 >gi|308062713|gb|ADO04601.1| putative inner membrane protein translocase component YidC [Helicobacter pylori Cuz20] Length = 547 Score = 309 bits (792), Expect = 8e-82, Method: Composition-based stats. Identities = 145/598 (24%), Positives = 256/598 (42%), Gaps = 77/598 (12%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERK---NIQTVKQPNQVDNSY 53 M++N N +AIALS + + + F+ P ++ N T PN N++ Sbjct: 1 MDKNNNANIRLILAIALSFLFIAIYSYFFQKPNKTTTPTTKQETTNNHTATSPNNTPNAF 60 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT---- 109 +A + LS + I+ G + + L+ + Sbjct: 61 SATQAIPQENLLS-----TISFEHARIEIDSLG-RIKQVYLKDKKYLTPKEKGFLEHVSH 114 Query: 110 LLSPSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKL 158 L +P EL ++ L NT ++ S L P + L Sbjct: 115 LFNPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVL 173 Query: 159 VFKNANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 + +T++ + HY +I N ++P +++ Sbjct: 174 TQDLGA-LTIIKTLTFYDDLHYDLQIAFKSPNK-----IIPSYVITNGYRPVADLDSY-T 226 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G + DK + + + D ++ I F + +L D+Y+ ++ F + Sbjct: 227 FSGVLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEALID 283 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 S+ + F + + G K++ ++ +P +I++ Sbjct: 284 --SEIGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAI-----LPMLTDVIEY 328 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ Sbjct: 329 GLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKM 388 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + Sbjct: 389 KELQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSS 447 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKG 515 + WI DL+ DP I P++M SM+ ++P D Sbjct: 448 EWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPSSVTDPM 488 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 QA + ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 489 QAKLFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQFIINKVLENKKRTHVQSKKE 546 >gi|322379151|ref|ZP_08053547.1| 60 kDa inner-membrane protein [Helicobacter suis HS1] gi|322381048|ref|ZP_08055076.1| inner membrane protein translocase component YidC [Helicobacter suis HS5] gi|321146518|gb|EFX41390.1| inner membrane protein translocase component YidC [Helicobacter suis HS5] gi|321148414|gb|EFX42918.1| 60 kDa inner-membrane protein [Helicobacter suis HS1] Length = 547 Score = 309 bits (791), Expect = 9e-82, Method: Composition-based stats. Identities = 141/584 (24%), Positives = 250/584 (42%), Gaps = 71/584 (12%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 E N + +AI LS + + + F+ + + T + +NS LI Sbjct: 17 ENNLRFILAIVLSFLFLTIYGYFF----------QTEKPHTALPTSTTNNSAPTTLIKQA 66 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI----VTLLSPSNTK 117 AQ S + + + + I+ G + + L+ LL S K Sbjct: 67 AQTPKSSIILTVLSKDMEIEIDSLG-RIAQVYLKDKKFTAHRQEDFLEHIKQLLGLSKPK 125 Query: 118 NAYFAELDYVSTA----------NNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNI 166 +A S A + + NT + + + P +V + N+ Sbjct: 126 SALEKLPLLGSNALKPLELRFVDSTLNQEAFNTPYIASTQTLQIDKAPKTVVLTQSLKNL 185 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 ++ ++ + + + + + + +P + + +LG Sbjct: 186 NVKKILTFYPNLTYDLRVELKPT--HPMNLA-YVLSNGSRPIADADGYAFH---GVLLGT 239 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + +K D + F + ++ D+Y+ S+F F S A + Sbjct: 240 QDHKLEKIEDGKAKQTQTFKSTT-FIASVDRYYTSLF-----------FTKDSPLDAIIE 287 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 A+ S + + + + G K+ + P +I++G F A+P+ Sbjct: 288 AQPSKDPLPFVS-LKGNAILHGYIGPKDHRLLEQIS-----PMLTKVIEYGVITFFARPV 341 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F+L+ Y + N+G AI+L T+ V+++ +PL+ K VS +K++ PK+ EL+EK+K Sbjct: 342 FLLLDYLHTYTHNWGWAIILLTLIVRIILYPLSYKGMVSMQKIKDLAPKMKELQEKYKSD 401 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 P Q LQ M+QLYK H NPL GC PILLQIPVFFAIY+V+ ++E++ A + WI DL+ Sbjct: 402 P-QKLQMHMMQLYKKHGANPLGGCLPILLQIPVFFAIYRVLYNAVELKSAGWMLWIHDLS 460 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 DP I P++M +SM+ Q ++P D QA I +P+ Sbjct: 461 LMDPYFIL-------------------PLLMGISMYAQQALTPSTITDPTQAKIFKMLPL 501 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 F L +FPAGL++YW+ +N+ SI+QQ +I +M + + + Sbjct: 502 FFTIFLITFPAGLVLYWTTNNIFSIIQQWLINQMLSKKKSEMQK 545 >gi|317179626|dbj|BAJ57414.1| putative inner membrane protein translocase component YidC [Helicobacter pylori F30] Length = 546 Score = 309 bits (791), Expect = 1e-81, Method: Composition-based stats. Identities = 147/601 (24%), Positives = 256/601 (42%), Gaps = 84/601 (13%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERK---NIQTVKQPNQVDNSY 53 M++N N +AIALS + + + F+ P ++ N T N + Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNQTTTQTTKQETTNNHTATNSNTPNAFS 60 Query: 54 AAVLIDDRAQALSMS---PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT- 109 AA I ++S R+E+ + + + L+ + Sbjct: 61 AAQTIPQENLLSAISFEHARIEIDSL----------GRIKQVYLKDKKYLTPKQKGFLEH 110 Query: 110 ---LLSPSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTP 155 L +P EL ++ L NT ++ S L P Sbjct: 111 VSHLFNPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQ 169 Query: 156 IKLVFKNANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + L + +T++ + HY +I NN +KP ++ Sbjct: 170 LVLTQDLGA-LTIIKTLTFYDDLHYDLQIAFKSPNN-----IIPSYVITNGYKPVADLDS 223 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + G + DK + + + D ++ I F + +L D+Y+ ++ F + Sbjct: 224 Y-TFSGVLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEA 279 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 S+ + F + + G K++ ++ P + Sbjct: 280 LID--SEIGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDV 324 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I Sbjct: 325 IEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIA 384 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E+ Sbjct: 385 PKMKELQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVEL 443 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512 + + + WI DL+ DP I P++M SM+ ++P Sbjct: 444 KSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPSSVT 484 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 485 DPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKK 544 Query: 573 T 573 Sbjct: 545 E 545 >gi|317182655|dbj|BAJ60439.1| putative inner membrane protein translocase component YidC [Helicobacter pylori F57] Length = 546 Score = 308 bits (789), Expect = 2e-81, Method: Composition-based stats. Identities = 142/601 (23%), Positives = 250/601 (41%), Gaps = 84/601 (13%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERK------NIQTVKQPNQVD 50 M++N N +AIALS + + + F+ P ++ PN Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNKTTTPTTKQETTNNHTATNSNTPNAFS 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT- 109 + + + R+E+ + + + L+ + Sbjct: 61 ATQTIPQENLLSAISFEHARIEIDSL----------GRIKQVYLKDKKYLTPKQKGFLEH 110 Query: 110 ---LLSPSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTP 155 L +P EL ++ L NT ++ S L P Sbjct: 111 VSHLFNPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQ 169 Query: 156 IKLVFKNANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + L + +T++ + HY +I NN +KP ++ Sbjct: 170 LVLTQDLGA-LTIIKTLTFYDDLHYDLQIAFKSPNN-----IIPSYVITNGYKPVADLDS 223 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + G + DK + + + D ++ I F + +L D+Y+ ++ F + Sbjct: 224 Y-TFSGVLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEA 279 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 S+ + F + + G K++ ++ P + Sbjct: 280 LID--SEIGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDV 324 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I Sbjct: 325 IEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIA 384 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E+ Sbjct: 385 PKMKELQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVEL 443 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512 + + + WI DL+ DP I P++M SM+ ++P Sbjct: 444 KSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPSSVT 484 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 485 DPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRAHAQNKK 544 Query: 573 T 573 Sbjct: 545 E 545 >gi|207091817|ref|ZP_03239604.1| putative inner membrane protein translocase component YidC [Helicobacter pylori HPKX_438_AG0C1] Length = 546 Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats. Identities = 142/593 (23%), Positives = 251/593 (42%), Gaps = 80/593 (13%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK---NIQTVKQPNQVDNSYAAVLIDDR 61 +AIALS + + + F+ P ++ N T PN + A I Sbjct: 9 LRLILAIALSFLFIALYSYFFQKPNKTTTQTTKQETTNNHTATSPNAPNAFSATQTIPQE 68 Query: 62 AQALSMS---PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSPS 114 ++S R+E+ + + + L+ + L S Sbjct: 69 NLLSAISFEHARIEIDSL----------GRIKQVYLKDKKYLTPKQKGFLEHVGHLFSSK 118 Query: 115 NTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVFKNA 163 EL ++ L NT ++ S L P + L ++ Sbjct: 119 ENAQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLT-QDL 176 Query: 164 NNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 + +T++ + HY KI NN ++P +++ G + Sbjct: 177 GTLTIIKTLTFYDDLHYDLKIAFKSPNN-----LIPSYVITNGYRPVADLDSY-TFSGVL 230 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 DK + + + D ++ I F + +L D+Y+ ++ F + S+ Sbjct: 231 LENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDSQGFEALID--SEI 285 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + F + + G K++ ++ P +I++G F Sbjct: 286 GTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITF 332 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS +K + PK+ EL+E Sbjct: 333 FAKGVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQE 392 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + W Sbjct: 393 KYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILW 451 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMIL 520 I DL+ DP I P++M SM+ ++P D QA I Sbjct: 452 IHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPNTMTDPMQAKIF 492 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 493 KLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545 >gi|15646059|ref|NP_208241.1| putative inner membrane protein translocase component YidC [Helicobacter pylori 26695] gi|38502836|sp|O25989|OXAA_HELPY RecName: Full=Inner membrane protein oxaA gi|2314626|gb|AAD08491.1| 60 kDa inner-membrane protein [Helicobacter pylori 26695] Length = 547 Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats. Identities = 145/601 (24%), Positives = 253/601 (42%), Gaps = 83/601 (13%) Query: 1 MERNWN---YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++N N +AIALS + + + F+ P + +N A Sbjct: 1 MDKNNNNLRLILAIALSFLFIALYSYFFQKPNKTTTQ--------TTKQETTNNHTATSP 52 Query: 58 IDDRAQALSMSPRVELKNPSLIGS-------INLKGAQFDDLNLRGYHLDVSSNSPIVT- 109 AQ S + +N S I+ G + + L+ + Sbjct: 53 NAPNAQHFSTTQTTPQENLLSTISFEHARIEIDSLG-RIKQVYLKDKKYLTPKQKGFLEH 111 Query: 110 ---LLSPSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTP 155 L S EL ++ L NT ++ S L P Sbjct: 112 VGHLFSSKENAQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQ 170 Query: 156 IKLVFKNANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + L ++ + +T++ + HY KI NN ++P ++ Sbjct: 171 LVLT-QDLGTLSIIKTLTFYDDLHYDLKIAFKSPNN-----LIPSYVITNGYRPVADLDS 224 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + G + DK + + + D ++ I F + +L D+Y+ ++ F + Sbjct: 225 Y-TFSGVLLENSDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEA 280 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 S+ + F + + G K++ ++ P + Sbjct: 281 LID--SEIGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDV 325 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS +K + Sbjct: 326 IEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELA 385 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E+ Sbjct: 386 PKMKELQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVEL 444 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512 + + + WI DL+ DP I P++M SM+ ++P Sbjct: 445 KSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPNTMT 485 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 486 DPMQAKIFKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKK 545 Query: 573 T 573 Sbjct: 546 E 546 >gi|291277160|ref|YP_003516932.1| inner membrane protein OxaA [Helicobacter mustelae 12198] gi|290964354|emb|CBG40204.1| putative inner-membrane protein, OxaA [Helicobacter mustelae 12198] Length = 546 Score = 307 bits (787), Expect = 3e-81, Method: Composition-based stats. Identities = 142/583 (24%), Positives = 248/583 (42%), Gaps = 70/583 (12%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N N +A+A S I + + ++V P+ + N KN ++ Q + A Sbjct: 1 MKNNSNLRIILAVAFSFIFIAIYSRYFVTPQ-QNAKNSAKNSTSIAQNQAPVKTENASSP 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN----SPIVTLLSPS 114 +A S + ++ I+ G + + L+ LL Sbjct: 60 APILEAESKNIIARIQAKEFDLEIDSLG-RIAQVYLKNKKYTGEQELGFFEHFKILLGMM 118 Query: 115 NTKNAYFAELDYVST----------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA- 163 + + + L T + I P LV Sbjct: 119 QKPKPLSKLPLFHPSELKPLEIRFANQELNLQAFKTSYEASKDFISLDKGPEVLVLTQKL 178 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + ++T++ E+ + I ++N S + +P T + G I Sbjct: 179 PGLTVKKTLTFYENLKYDIQVELSNPSEN------YFITNGARPMTDKENYA-FNGVILE 231 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 D + + + D ++ + ++ D+Y+ ++F Y + Sbjct: 232 KVDGKIEKIEDKDAKE---LKTFDGAKFVASVDRYFTTLF-------------YAKNSQL 275 Query: 284 RYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + +P + F G K++ + + P ++++G F Sbjct: 276 DVIIDSNPKNKDPMPYVHATGNLGMGGFIGPKDYQELKSVD-----PALRNVVEYGLITF 330 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 AKP+F+L+ Y + +GN+G AI+ TV VKL+ +PL+ K VS +K++ PK+ E++E Sbjct: 331 FAKPVFLLLEYLHQYIGNWGWAIITLTVIVKLVLYPLSYKGMVSMQKLKDLTPKMKEIQE 390 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K P Q LQ M+QLYK H NP+ GC P+L+QIP+F+AIY+V+ S+E++ APF W Sbjct: 391 KYKGDP-QKLQMHMMQLYKKHGANPMGGCLPLLIQIPIFYAIYRVLYNSVELKSAPFILW 449 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL 520 I+DL+ DP + PI+M +SM++Q ++P D QA + Sbjct: 450 IQDLSVMDPYFVL-------------------PILMGVSMYVQQALTPNTFTDPIQAKVF 490 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +PVVF L FPAGL++YW+ +N++SI QQ I KM + Sbjct: 491 KMLPVVFTIFLIFFPAGLVLYWTINNILSIFQQLSINKMLKRQ 533 >gi|254779961|ref|YP_003058068.1| putative inner membrane protein translocase component YidC [Helicobacter pylori B38] gi|254001874|emb|CAX30124.1| Putative inner membrane insertion protein; putative membrane protein; putative signal peptide [Helicobacter pylori B38] Length = 546 Score = 307 bits (787), Expect = 3e-81, Method: Composition-based stats. Identities = 143/596 (23%), Positives = 249/596 (41%), Gaps = 80/596 (13%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N N +AIALS + + + F+ P + +N A A Sbjct: 5 NNTNLILAIALSFLFIAIYSYFFQKPNKTTTQ--------TTKQETTNNHTATNPNAPNA 56 Query: 63 QALSMSPRVELKNPSLIGS-------INLKGAQFDDLNLRGYHLDVSSNSPIVT----LL 111 Q + + +N S I+ G + + L+ + L Sbjct: 57 QNFGTTQTIPQENLLSTISFEHARIEIDSLG-RIKQVYLKDKKYLTPKQKGFLEHVGHLF 115 Query: 112 SPSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVF 160 S EL ++ L NT ++ S L P + L Sbjct: 116 SSKENAQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLT- 173 Query: 161 KNANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 ++ + +T++ + HY KI NN ++P +++ Sbjct: 174 QDLGTLSIIKTLTFYDDLHYDLKIAFKSPNN-----LIPSYVITNGYRPVADLDSY-TFS 227 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G + DK + + + D ++ I F + +L D+Y+ ++ F + Sbjct: 228 GVLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEALID-- 282 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 S+ + F + + G K++ ++ P I++G Sbjct: 283 SEIGTKNPLGFIS--------LKNEADLHGYIGPKDYRSLKAIS-----PMLTDAIEYGL 329 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS +K + PK+ E Sbjct: 330 ITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKE 389 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + Sbjct: 390 LQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEW 448 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQA 517 WI DL+ DP I P++M SM+ ++P D QA Sbjct: 449 ILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPNTMTDPMQA 489 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 490 KIFKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545 >gi|332674216|gb|AEE71033.1| inner membrane protein OxaA [Helicobacter pylori 83] Length = 546 Score = 307 bits (787), Expect = 3e-81, Method: Composition-based stats. Identities = 144/601 (23%), Positives = 254/601 (42%), Gaps = 84/601 (13%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN-----IQTVKQPNQVDN 51 M++N N +AIALS + + + F+ P ++ T N Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNKTTTPTTKQETTNNHTATNSNTPNAFN 60 Query: 52 SYAAVLIDDRAQALS-MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT- 109 + + ++ A+S R+E+ + + + L+ + Sbjct: 61 TTQTIPQENLLSAISFEHARIEIDSL----------GRIKQVYLKDKKYLTPKQKGFLEH 110 Query: 110 ---LLSPSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTP 155 L +P EL ++ L NT ++ S L P Sbjct: 111 VSHLFNPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQ 169 Query: 156 IKLVFKNANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + L + +T++ + HY +I NN +KP ++ Sbjct: 170 LVLTQDLGA-LTIIKTLTFYDDLHYDLQIAFKSPNN-----IIPSYVITNGYKPVADLDS 223 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + G + DK + + + D ++ I F + +L D+Y+ ++ F + Sbjct: 224 Y-TFSGVLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDSQGFEA 279 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 S+ + F + + G K++ ++ P + Sbjct: 280 LID--SEIGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDV 324 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I Sbjct: 325 IEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIA 384 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E+ Sbjct: 385 PKMKELQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVEL 443 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512 + + + WI DL+ DP I P++M SM+ ++P Sbjct: 444 KSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPSSVT 484 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 485 DPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRTHAQNKK 544 Query: 573 T 573 Sbjct: 545 E 545 >gi|261838725|gb|ACX98491.1| inner membrane protein [Helicobacter pylori 51] Length = 546 Score = 307 bits (786), Expect = 3e-81, Method: Composition-based stats. Identities = 141/601 (23%), Positives = 250/601 (41%), Gaps = 84/601 (13%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERK------NIQTVKQPNQVD 50 M++N N +AIALS + + + F+ P ++ PN Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNKTTTPTTKQETTNNHTATNSNTPNAFS 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT- 109 + + + R+E+ + + + L+ + Sbjct: 61 ATQTIPQENLLSAISFEHARIEIDSL----------GRIKQVYLKDKKYLTPKQKGFLEH 110 Query: 110 ---LLSPSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTP 155 L +P EL ++ L NT ++ S L P Sbjct: 111 VSHLFNPKANPQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQ 169 Query: 156 IKLVFKNANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + L + +T++ + HY +I NN ++P ++ Sbjct: 170 LVLTQDLGA-LAIIKTLTFYDDLHYDLQIAFKSPNN-----IIPSYVITNGYRPVADLDS 223 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + G + DK + + + D ++ I F + +L D+Y+ ++ F + Sbjct: 224 Y-TFSGVLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEA 279 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 S+ + F + + G K++ ++ P + Sbjct: 280 LID--SEIGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDV 324 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I Sbjct: 325 IEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIA 384 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E+ Sbjct: 385 PKMKELQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVEL 443 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512 + + + WI DL+ DP I P++M SM+ ++P Sbjct: 444 KSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPSSVT 484 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 485 DPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRTHAQNKK 544 Query: 573 T 573 Sbjct: 545 E 545 >gi|189485052|ref|YP_001955993.1| protein translocase subunit YidC [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|254778169|sp|B1GZ50|OXAA_UNCTG RecName: Full=Inner membrane protein oxaA gi|170287011|dbj|BAG13532.1| protein translocase subunit YidC [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 519 Score = 307 bits (786), Expect = 4e-81, Method: Composition-based stats. Identities = 128/560 (22%), Positives = 246/560 (43%), Gaps = 54/560 (9%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID--DR 61 N + + LS V+ W F+ P + + TV N + ++ Sbjct: 2 QKNSILFVTLSAFTVFIWYFFFAQPSEQSYRQMMQLQNTVAVSESGVNKFKNADLNEFQI 61 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + ++ + KG +++ N V L+ P + Sbjct: 62 DDIYAKEEHINIETEQYKAVLTNKGGGVLSWSVK------EKNGQWVDLVFPESAP---- 111 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 + N + ++S I + + + +L + Y+ Sbjct: 112 -----------VMANFPNLTYKVVSKS----AEKIVFEYASKEGWKITKIYNLSDLYMHN 156 Query: 182 IVDTVTNNSIDQIRFSPRGRI-MRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + +V N+ +P +I ++ P T++ ++E I++ K + ++K Sbjct: 157 LNISVEKNAK-----TPFPQIDLKWGPGLGTDSKELKEN-ISLTRALVYTAVKPNKLKKL 210 Query: 241 SISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + S W + ++Y+ FIP F + A E + Sbjct: 211 KDNFEPASLCKWTAVDNRYFLVAFIPKNSMDFDKILFSRLEKKHPCSVILKAAEPKDVDK 270 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 K + + G K++ + Y+ L E +D+G+F F+ K F ++ +FY L N Sbjct: 271 KDYSVN--FYLGPKDYKYLKTYDLGL-----EKTVDFGFFGFLGKIAFSILVFFYKLTHN 323 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI++ T +++L PL K + S+A MK +QP I +++ K+K +P Q L+ M+ +Y Sbjct: 324 YGWAIIMLTTIIQILVLPLTLKSFKSSAAMKRVQPVIKDIQTKYKDNP-QRLKAEMLNIY 382 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 ++ +NPL GC P+LLQ+P+F+A + ++ + E+R+ + W+KDL+AAD F F Sbjct: 383 QSQKVNPLGGCLPMLLQLPIFWAFFTMLRNAYELRNEGWILWVKDLSAADQFMQFGSF-- 440 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 ++ + P++M + MF Q +M+ +D Q I+ MPV+F F SFP+GL+ Sbjct: 441 ---------NLNLLPLMMGIGMFFQQRMTTVTSDPTQRKIMYIMPVIFTFMFWSFPSGLV 491 Query: 540 IYWSWSNVISIVQQAVIMKM 559 +YW +++IS+++Q IMK Sbjct: 492 LYWLTNSLISMIEQYFIMKK 511 >gi|317178154|dbj|BAJ55943.1| putative inner membrane protein translocase component YidC [Helicobacter pylori F16] Length = 546 Score = 306 bits (785), Expect = 5e-81, Method: Composition-based stats. Identities = 143/601 (23%), Positives = 252/601 (41%), Gaps = 84/601 (13%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERK------NIQTVKQPNQVD 50 M++N N +AIALS + + + F+ P ++ PN Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNKTTTPTTKQETTNNHTATNSNTPNTFS 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT- 109 + A + + R+E+ + + + L+ + Sbjct: 61 PTQAIPQENLLSTISFEHARIEIDSL----------GRIKQVYLKDKKYLTPKQKGFLEH 110 Query: 110 ---LLSPSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTP 155 L +P EL ++T L NT ++ S L P Sbjct: 111 VSHLFNPKANVQPLLKELPLLATDKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQ 169 Query: 156 IKLVFKNANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + L + +T++ + HY +I NN ++P ++ Sbjct: 170 LVLTQDLGA-LTIIKTLTFYDDLHYDLQIAFKSPNN-----IIPSYVITNGYRPVADLDS 223 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + G + DK + + + D ++ I F + +L D+Y+ ++ F + Sbjct: 224 Y-TFSGVLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEA 279 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 S+ + F + + G K++ ++ P + Sbjct: 280 LID--SEIGTKNPLGFIS--------LKSEANLHGYIGPKDYLSLKAIS-----PMLTDV 324 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I Sbjct: 325 IEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIA 384 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E+ Sbjct: 385 PKMKELQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVEL 443 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512 + + + WI DL+ DP I P++M SM+ ++P Sbjct: 444 KSSEWILWIHDLSIMDPYFIL-------------------PLLMGTSMYWHQSVTPSSVT 484 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 485 DPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQNKK 544 Query: 573 T 573 Sbjct: 545 E 545 >gi|297380697|gb|ADI35584.1| inner membrane protein translocase component YidC [Helicobacter pylori v225d] Length = 546 Score = 306 bits (784), Expect = 6e-81, Method: Composition-based stats. Identities = 140/601 (23%), Positives = 252/601 (41%), Gaps = 84/601 (13%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERK------NIQTVKQPNQVD 50 M++N N +AIALS + + + F+ P ++ PN + Sbjct: 1 MDKNNNANIRLILAIALSFLFIAIYSYFFQKPNKTTTPTTKQETTNNHTATNSNTPNAFN 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT- 109 + A + + R+E+ + + + L+ + Sbjct: 61 ATQAIPQENLLSTISFEHARIEIDSL----------GRIKQVYLKDKKYLTPKQKGFLEH 110 Query: 110 ---LLSPSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTP 155 L +P EL ++ L NT ++ S L P Sbjct: 111 VSHLFNPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQ 169 Query: 156 IKLVFKNANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + L ++ + +T++ + HY +I N ++P ++ Sbjct: 170 LVLT-QDLGTLTIIKTLTFYDDLHYDLQIAFKSPNK-----IIPSYVITNGYRPVADLDS 223 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + G + DK + + + D ++ I F + +L D+Y+ ++ F + Sbjct: 224 Y-TFSGVLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEA 279 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + + F + + G K++ ++ P + Sbjct: 280 LID--PEIGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDV 324 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I Sbjct: 325 IEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIA 384 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E+ Sbjct: 385 PKMKELQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVEL 443 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512 + + + WI DL+ DP I P++M SM+ ++P Sbjct: 444 KSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPSSVT 484 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 485 DPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQSKK 544 Query: 573 T 573 Sbjct: 545 E 545 >gi|108563801|ref|YP_628117.1| putative inner membrane protein translocase component YidC [Helicobacter pylori HPAG1] gi|107837574|gb|ABF85443.1| 60 kDa inner-membrane protein [Helicobacter pylori HPAG1] Length = 548 Score = 306 bits (783), Expect = 8e-81, Method: Composition-based stats. Identities = 142/594 (23%), Positives = 250/594 (42%), Gaps = 80/594 (13%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 +AIALS + + + F+ P + +N A AQ Sbjct: 9 LRLILAIALSFLFIAIYSYFFQKPNKTTTQ--------TTKQETTNNHTATSPNAPNAQH 60 Query: 65 LSMSPRVELKNPSLIGS-------INLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSP 113 S++ + +N S I+ G + + L+ + L SP Sbjct: 61 FSVTQTIPQENLLSTISFEHARIEIDSLG-RIKQVYLKDKKYLTPKQKGFLEHVGHLFSP 119 Query: 114 SNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVFKN 162 EL ++ L NT ++ S L P + L ++ Sbjct: 120 KANPQNLLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLT-QD 177 Query: 163 ANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + +T++ + HY +I NN ++P +++ G Sbjct: 178 LGTLTIIKTLTFYDDLHYDLQIAFKSPNN-----IIPSYVITNGYRPVADLDSY-TFSGV 231 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + DK + + + D ++ I F + +L D+Y+ ++ F + S+ Sbjct: 232 LLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEALID--SE 286 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 + F + + G K++ ++ P +I++G Sbjct: 287 IGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLIT 333 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F AK +F+L+ Y Y VGN+G AI+ T+ V+L+ +PL+ K VS +K + PK+ EL+ Sbjct: 334 FFAKGVFVLLDYLYQFVGNWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELSPKMKELQ 393 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + Sbjct: 394 EKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWIL 452 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI 519 WI DL+ DP I P++M SM+ ++P D QA I Sbjct: 453 WIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPNTMTDPMQAKI 493 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 494 FKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 547 >gi|217033919|ref|ZP_03439343.1| hypothetical protein HP9810_870g51 [Helicobacter pylori 98-10] gi|216943682|gb|EEC23127.1| hypothetical protein HP9810_870g51 [Helicobacter pylori 98-10] Length = 546 Score = 306 bits (783), Expect = 9e-81, Method: Composition-based stats. Identities = 144/595 (24%), Positives = 252/595 (42%), Gaps = 72/595 (12%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N +AIALS + + + F+ + Q + NS A Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFF---QKPNQTTTPTTKQETTNNHTATNSNAPN 57 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLS 112 + + + I+ G + + L+ + L + Sbjct: 58 AFNTTQTIPQENLLSTISFEHARIEIDSLG-RIKQVYLKDKKYLTPKQKGFLEHVSHLFN 116 Query: 113 PSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVFK 161 P EL ++ L NT ++ S L P + L + Sbjct: 117 PKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLT-Q 174 Query: 162 NANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N + +T++ + HY +I NN +KP +++ G Sbjct: 175 DLNTLTIIKTLTFYDDLHYDLQIAFKSPNN-----IIPSYVITNGYKPVADLDSY-TFSG 228 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + DK + + + D ++ I F + +L D+Y+ ++ F + S Sbjct: 229 VLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEALID--S 283 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 + + F + + G K++ ++ P +I++G Sbjct: 284 EIGTKNPLGFIS--------FKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLI 330 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL Sbjct: 331 TFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKEL 390 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + Sbjct: 391 QEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWI 449 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAM 518 WI DL+ DP I P++M SM+ ++P D QA Sbjct: 450 LWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPSSVTDPMQAK 490 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 491 IFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRAHAQSKKE 545 >gi|317181133|dbj|BAJ58919.1| putative inner membrane protein translocase component YidC [Helicobacter pylori F32] Length = 546 Score = 306 bits (783), Expect = 9e-81, Method: Composition-based stats. Identities = 141/601 (23%), Positives = 250/601 (41%), Gaps = 84/601 (13%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERK------NIQTVKQPNQVD 50 M++N N +AIALS + + + F+ P ++ PN Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNQTTTPTTKQETTNNHTATNSNTPNAFS 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT- 109 + + + R+E+ + + + L+ + Sbjct: 61 ATQTIPQENLLSAISFEHARIEIDSL----------GRIKQVYLKDKKYLTPKQKGFLEH 110 Query: 110 ---LLSPSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTP 155 L +P EL ++ L NT ++ S L P Sbjct: 111 VSHLFNPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQ 169 Query: 156 IKLVFKNANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + L + +T++ + HY +I NN ++P ++ Sbjct: 170 LVLTQDLGA-LTIIKTLTFYDDLHYDLQIAFKSPNN-----IIPSYVITNGYRPVADLDS 223 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + G + DK + + + D ++ I F + +L D+Y+ ++ F + Sbjct: 224 Y-TFSGVLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEA 279 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 S+ + F + + G K++ ++ P + Sbjct: 280 LID--SEIGTKNPLGFIS--------LKSEANLHGYIGPKDYRSLKAIS-----PMLTDV 324 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I Sbjct: 325 IEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIA 384 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E+ Sbjct: 385 PKMKELQEKYK-DEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVEL 443 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512 + + + WI DL+ DP I P++M SM+ ++P Sbjct: 444 KSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPSSVT 484 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 485 DPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRAHAQNKK 544 Query: 573 T 573 Sbjct: 545 E 545 >gi|315637646|ref|ZP_07892852.1| inner membrane protein [Arcobacter butzleri JV22] gi|315478100|gb|EFU68827.1| inner membrane protein [Arcobacter butzleri JV22] Length = 533 Score = 306 bits (783), Expect = 9e-81, Method: Composition-based stats. Identities = 152/579 (26%), Positives = 246/579 (42%), Gaps = 76/579 (13%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR-- 61 + + + A++ + P+ E + K Q KQ + + S + V+ ++ Sbjct: 11 QKRMIIMTIVVFVFFIAYEFLVLKPQQEAKMAQAKIEQEQKQNSAPEVSTSQVVAENSVN 70 Query: 62 --------AQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTL 110 ++ +S S V +K + I+ G + + L Y N + L Sbjct: 71 TPNVDTISSKNVSNSQIVSVIKTAKNVIEIDNLG-RVAQVTLTEEKYK---DENGAQIKL 126 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 + K E+ + N E N V + + + L N +L ++ Sbjct: 127 FEVNQLKPL---EVRFADININEEAFKVNVVPSSSNIDATQNKQELVLTQTLTNTVLTKK 183 Query: 171 -TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 TI D HY + ++ D+ F G +P + + V GFI L D SL Sbjct: 184 FTIYPDGHYDLTVS-----STNDKPFFVSNGF----RPNVLVDMYAVH-GFITKLNDNSL 233 Query: 230 VEQKYSDIEKSSISNFHESNS--WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 IE S ++ D+Y+A+V Q + D Q+ Sbjct: 234 TT-----IEDGSSKKNETFVGSKFVSNFDRYYATVIY---NFEKSLQVTVMPDSSNNPQS 285 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 S + + G K + P +ID+GWF FIAKPMF Sbjct: 286 FI---------HSSGNISFSGYMGPKNHRVLESLN-----PELIDVIDYGWFTFIAKPMF 331 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +L+ + +GN+G I+ T+ VKL+ +PL+ K VS +K++ PK+ E++ K+K Sbjct: 332 VLLQFLQGYIGNWGWTIVALTILVKLVLYPLSYKGMVSMQKLKDLAPKMKEIQLKYKDDK 391 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q M++LYK H NP+ GC P+LLQIP+FFAIY+V+ ++E++ A + WI DLAA Sbjct: 392 -QKQSMHMMELYKKHGANPMGGCLPLLLQIPIFFAIYRVLINAIELKGAEWIFWIHDLAA 450 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP + PI+M +M+IQ K++P D+ Q I +P+V Sbjct: 451 MDPFFVL-------------------PILMGATMYIQQKITPTTVQDELQKKIFQLLPIV 491 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 F F FPAGL +YW +N+ +I QQ VI K + Sbjct: 492 FTFFFLWFPAGLTLYWFVNNLFTIGQQYVINKTFERKRA 530 >gi|308183546|ref|YP_003927673.1| putative inner membrane protein translocase component YidC [Helicobacter pylori PeCan4] gi|308065731|gb|ADO07623.1| putative inner membrane protein translocase component YidC [Helicobacter pylori PeCan4] Length = 548 Score = 305 bits (782), Expect = 1e-80, Method: Composition-based stats. Identities = 143/594 (24%), Positives = 248/594 (41%), Gaps = 80/594 (13%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 +AIALS + + + F+ P + +N AQ Sbjct: 9 LRLILAIALSFLFIALYSYFFQKPNKTTTQ--------TTKQETTNNHTTTSPNAPNAQH 60 Query: 65 LSMSPRVELKNPSLIGS-------INLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSP 113 S++ + +N S I+ G + + L+ + L S Sbjct: 61 FSVTQTIPQENLLSTISFEHARIEIDSLG-RIKQVYLKDKKYLTPKEKGFLEHVGHLFSS 119 Query: 114 SNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVFKN 162 EL ++ L NT ++ S L P + L Sbjct: 120 KENAQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLTQDL 178 Query: 163 ANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + +T++ + HY KI NN ++P +++ G Sbjct: 179 GA-LTIIKTLTFYDDLHYDLKIAFKSPNN-----LIPSYVITNGYRPVADLDSY-TFSGV 231 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + DK + + + D ++ I F + +L D+Y+ ++ F + S+ Sbjct: 232 LLENTDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDSQGFEALID--SE 286 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 + F + T + G K++ ++ P +I++G Sbjct: 287 IGTKNPLGFIS--------LKNEATLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLIT 333 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K + PK+ EL+ Sbjct: 334 FFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQ 393 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + Sbjct: 394 EKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWIL 452 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI 519 WI DL+ DP I P++M SM+ ++P D QA I Sbjct: 453 WIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPNTMTDPMQAKI 493 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 494 FKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 547 >gi|325294818|ref|YP_004281332.1| Membrane protein oxaA [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065266|gb|ADY73273.1| Membrane protein oxaA [Desulfurobacterium thermolithotrophum DSM 11699] Length = 490 Score = 305 bits (780), Expect = 2e-80, Method: Composition-based stats. Identities = 134/570 (23%), Positives = 238/570 (41%), Gaps = 89/570 (15%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME+N + A L+ I+V +Q F+ + EE N ++ ++ V+ Sbjct: 1 MEKNKLLSIVQAALLAFILVLGFQFFFG--KNEERKNVKEALKQEH-----------VVK 47 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D ++ + V++K P I+ + L ++ Y+ L+S + K Sbjct: 48 VDIPESREIGKVVKVKTPLYSAEISTVNGKLLSLTVKKYNA---------QLVSEFSKKM 98 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA--NNILFERTISL-D 175 F + +ST + +N K+L + L + + + F + ++ Sbjct: 99 GIFPLMT-ISTDEKLSKELANISLTPSMKKVLVKDKAVILKLEGSLQDGRKFVKELTFYP 157 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + Y + I P N + +G E+ Sbjct: 158 DSYRIDVKTE----------LKGEKLITLIGPDIRVN--EAHTSRMGHIGPVVETEKGIE 205 Query: 236 DIEKSSISNF--HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 +E I ++ W G DKY+ K+T F + + F + Sbjct: 206 RLEPQEIKTPISFKNVKWAGEEDKYFLMAI---KDTDFPVSIENI--NSHTVIKGFIGSG 260 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 I + G KE + + ID+G F F+AKP + Sbjct: 261 I-------------FYGGPKELNQLESL-------GMDKAIDFGIFGFLAKPFLKFFLFL 300 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + + N+G+ I++ T+ +K++ PL K + S M+ + PK++E++ K+K +P Q L + Sbjct: 301 HQFIPNWGLVIIVLTILIKIILHPLTHKSFESMKKMQELAPKLEEIKNKYKDNP-QKLNE 359 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYK +NP+ GC PILLQIP+FFA+Y++ ++E++ A + W+ DL+ D T I Sbjct: 360 EMMKLYKEAGVNPMGGCLPILLQIPIFFALYEIFLNAVELKGAS-FLWVPDLSMPDSTFI 418 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 PI+M SM +Q K++P + Q I M VVF F +S Sbjct: 419 -------------------MPILMGASMILQQKLTPT-TNPQQEKIFMIMAVVFTFMFAS 458 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW +N+I+ +Q +I +M E Sbjct: 459 FPAGLVLYWLTNNIITAIQNFIINRMLHRE 488 >gi|268318300|ref|YP_003292019.1| 60 kDa inner membrane insertion protein [Rhodothermus marinus DSM 4252] gi|262335834|gb|ACY49631.1| 60 kDa inner membrane insertion protein [Rhodothermus marinus DSM 4252] Length = 607 Score = 305 bits (780), Expect = 2e-80, Method: Composition-based stats. Identities = 127/599 (21%), Positives = 242/599 (40%), Gaps = 63/599 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPR-----------IEEMNNERKNIQTVKQPNQV 49 M+ N +A L+ +I++ W + P +E ++ I + P Sbjct: 1 MD--RNVVIATILTALIMFVWLWWLAPPPPPPTTAARDSLQQEDTAAQEVIAQEEAPTAP 58 Query: 50 DNSYAAVLIDDRAQALSMSPR---VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 A ++D A + + R + ++ ++ KGA L L+ Y +P Sbjct: 59 GAPLLAGPLNDTLLAAARNGRARTITIETDLYEAQLSTKGATLVSLKLKKYKQ-YDFETP 117 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN- 165 + + TK + + T + ++ + I P+++ F+ Sbjct: 118 VQLV---DTTKPGALSLVFTTPTNHLVDTRALYFRTATTADTIRVADEPVEVAFEVPVGD 174 Query: 166 ILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIM---------RHKPQTATNTFG 215 + + Y ++ V ++ R + A Sbjct: 175 GRIRQVYTFLPGDY--EVRLRVEQEGAATFSTIEGYELVWNGGVPFAERDRDDEAR---- 228 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G A G L + D +++ W+ + +K++ +V IPS ET Sbjct: 229 -HSGAFARSG-GELEKITL-DGQRTEEKRLAGQVDWVAVKNKFFTAVMIPSGETRGAELV 285 Query: 276 --KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + Y ++A + P L+ G E+ + Y+ L + Sbjct: 286 GERLGEPEDPSYWEDYAARLLMPRPEDGQVDEFRLYLGPMEYFRLARYDLGLY-----DM 340 Query: 334 IDWGW--FYFIAKPM-----FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 +D+GW F ++ +P+ L + L+GN+G+AI++ + VK+ +PL + + + Sbjct: 341 VDYGWDAFEWMTRPLAKFVFIPLFTLLGRLLGNYGLAIIVFALLVKIALYPLTRASFRNM 400 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QP+++ +REK+ +P Q Q+A+++LY+ INPL GC P+LLQ PV A+++ Sbjct: 401 AKMRELQPELEAIREKYADNP-QKQQEALMKLYREKKINPLGGCLPMLLQWPVLIALWQY 459 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 SL +R + W KDL+A DP I L +P Y V + ++M LSM IQM+ Sbjct: 460 FQQSLIVRQ-QAFLWAKDLSAPDP--ILHLPFKIPLYGD---FVAGFTLLMGLSMIIQMR 513 Query: 507 MS--PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + P++ ++ PV + + L +Y+ N+ S +QQ I + E Sbjct: 514 IQSASTPSNPQTKILTYVFPVFIFAIFNRLSSALNLYYLCYNIFSAIQQFWINRSLEKE 572 >gi|116620215|ref|YP_822371.1| protein translocase subunit yidC [Candidatus Solibacter usitatus Ellin6076] gi|116223377|gb|ABJ82086.1| protein translocase subunit yidC [Candidatus Solibacter usitatus Ellin6076] Length = 579 Score = 305 bits (780), Expect = 2e-80, Method: Composition-based stats. Identities = 135/575 (23%), Positives = 236/575 (41%), Gaps = 62/575 (10%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP------------NQVDNSY 53 +A L +++ + P+ + P Sbjct: 25 RLLLAFILMGAVMFLTPYIFPTPKPPAKKDAATTAAVTPSPAAADASNPAATAPSGPAVV 84 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A + A P + ++ +GA L+ Y ++S + L++ Sbjct: 85 EAGSLPADATQQKPEPAFVINTDLYRVVLSNQGATVRSWQLKRYK---GNDSKPLDLVNS 141 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + + F+ N N W +G + + + + ++ + + Sbjct: 142 VSGLDFPFSLY----FPGQKPASNVNWTWYKQTGD--ADGLGVTYEYSDGH-VVVRKVVR 194 Query: 174 L-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAVLGDKSLV 230 + YL + VT + + P R T TN Q L LV Sbjct: 195 FQKDSYLSMVSCEVTLDG----KPIPHLLQWRGGFGDLTLTNAAAGQRTLYFDLTTNKLV 250 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 EQ K I++ + S+ GI+D Y+A+VF+P +D ++ Sbjct: 251 EQNPKAAAKGPITS-EGTFSFAGIADTYFAAVFLPEGNGRMQQV--TFADTVRTPTSETP 307 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + G LF G K+ + P+ E ++D+GW +AKP+F+++ Sbjct: 308 LPLSGVAVGDGPPIRFELFVGPKDVDMLRKIN-----PKLEQVVDFGWLSVLAKPLFLIV 362 Query: 351 SYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ---- 405 +Y + LV NFG AI+L T+ + + FPL S M+ ++P++D + K+K Sbjct: 363 NYVNDTLVHNFGWAIVLVTIAINFILFPLKLSNMKSMRKMQALKPQVDAINAKYKNVGLR 422 Query: 406 SPPQV-LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 P + + LYK H +NP+ GC P++LQIP FFA YKV ++S+EMR AP W W+ D Sbjct: 423 DPRAADKNQETMDLYKKHGVNPMGGCLPMVLQIPFFFAFYKVFTVSVEMRGAP-WLWVSD 481 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWM 523 L+ + + + I P++M S F+ +M+P PA D Q ++ +M Sbjct: 482 LSQPET-----------------LPIKILPLVMIASQFVMQRMTPQPAGDPAQQKMMMFM 524 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P+VF F +FP+GL++Y+ SN++S+ QQ K Sbjct: 525 PLVFGFMFYNFPSGLVLYYLTSNLVSMGQQWFFNK 559 >gi|157737856|ref|YP_001490540.1| putative inner membrane protein translocase component YidC [Arcobacter butzleri RM4018] gi|157699710|gb|ABV67870.1| inner membrane protein, 60 kDa [Arcobacter butzleri RM4018] Length = 533 Score = 304 bits (779), Expect = 2e-80, Method: Composition-based stats. Identities = 150/579 (25%), Positives = 247/579 (42%), Gaps = 76/579 (13%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR-- 61 + + + A++ + P+ E + K Q KQ + + S + V+ ++ Sbjct: 11 QKRMIIMTIVVFVFFIAYEFLVLKPQQEAKMAQAKIEQEQKQNSAPEVSTSQVVAENSVN 70 Query: 62 --------AQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTL 110 ++ +S S V +K I I+ G + + L Y N + L Sbjct: 71 TPNVDAISSKNVSNSQIVSVIKTAKNIIEIDNLG-RVAQVTLTEEKYK---DENGAQIKL 126 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 + K E+ + N E N V + + + L N +L ++ Sbjct: 127 FEANQLKPL---EVRFADININEEAFKVNVVPSSSNIDATQNKQELVLTQTLTNTVLTKK 183 Query: 171 -TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 TI D HY + ++ D+ F G +P + + V GFI L D SL Sbjct: 184 FTIYPDGHYDLTVS-----STNDKPFFVSNGF----RPNVLVDMYAVH-GFITKLNDNSL 233 Query: 230 VEQKYSDIEKSSISNFHESNS--WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 IE S ++ D+Y+A+V Q + D Q+ Sbjct: 234 TT-----IEDGSSKKNETFVGSKFVSNFDRYYATVIY---NFEKSLQVTVMPDSSNNPQS 285 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 S + + G K + P +ID+GWF FIAKPMF Sbjct: 286 FI---------HSSGDISFSGYMGPKNHRVLESLN-----PELIDVIDYGWFTFIAKPMF 331 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +L+ + + +GN+G I+ T+ VK++ +PL+ K VS +K++ PK+ E++ K+K Sbjct: 332 VLLQFLQSYIGNWGWTIVALTILVKVVLYPLSYKGMVSMQKLKDLAPKMKEIQLKYKDDK 391 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q M++LYK H NP+ GC P++LQIP+FFAIY+V+ ++E++ A + WI DLAA Sbjct: 392 -QKQSMHMMELYKKHGANPMGGCLPLILQIPIFFAIYRVLINAIELKGAEWIFWIHDLAA 450 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP + PI+M +M+IQ +++P D+ Q I +P+V Sbjct: 451 MDPFFVL-------------------PILMGATMYIQQRITPTTVQDELQKKIFQLLPIV 491 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 F F FPAGL +YW +N+ +I QQ VI K + Sbjct: 492 FTFFFLWFPAGLTLYWFVNNLFTIGQQYVINKTFERKRA 530 >gi|210135616|ref|YP_002302055.1| putative inner membrane protein translocase component YidC [Helicobacter pylori P12] gi|210133584|gb|ACJ08575.1| inner membrane protein translocase component [Helicobacter pylori P12] Length = 546 Score = 304 bits (779), Expect = 2e-80, Method: Composition-based stats. Identities = 138/590 (23%), Positives = 249/590 (42%), Gaps = 80/590 (13%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERK------NIQTVKQPNQVDNSYAAVLIDDR 61 +AIALS + + + F+ P ++ + PN + + + Sbjct: 12 ILAIALSFLFIAIYSYFFQKPNKSTTQTTKQETTNNHTATSSNAPNAFNATQTIPQENLL 71 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSPSNTK 117 + R+E+ + + + L+ + L +P Sbjct: 72 STISFEHARIEIDSL----------GRIKQVYLKDKKYLTPKQKGFLEHVGHLFNPKANP 121 Query: 118 NAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 EL ++ L NT ++ S L P + L ++ N + Sbjct: 122 QTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLT-QDLNTL 179 Query: 167 LFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 +T++ + HY KI NN ++P +++ G + Sbjct: 180 TIIKTLTFYDDLHYDLKIAFKSPNN-----IIPSYVITNGYRPVADLDSY-TFSGVLLEN 233 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 DK + + + D ++ I F + +L D+Y+ ++ F + S+ + Sbjct: 234 NDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEALID--SEIGTK 288 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 F + + G K++ ++ P +I++G F AK Sbjct: 289 NPLGFIS--------LKNEADLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAK 335 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F+L+ Y Y VGN+G AI+ T+ V+L+ +PL+ K VS +K + PK+ EL+EK+K Sbjct: 336 GVFVLLDYLYQFVGNWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYK 395 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI D Sbjct: 396 G-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHD 454 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWM 523 L+ DP I P++M SM+ ++P D QA I + Sbjct: 455 LSIMDPYFIL-------------------PLLMGASMYWHQSVTPNTMTDPMQAKIFKLL 495 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545 >gi|319789453|ref|YP_004151086.1| membrane protein insertase, YidC/Oxa1 family [Thermovibrio ammonificans HB-1] gi|317113955|gb|ADU96445.1| membrane protein insertase, YidC/Oxa1 family [Thermovibrio ammonificans HB-1] Length = 490 Score = 304 bits (779), Expect = 3e-80, Method: Composition-based stats. Identities = 128/569 (22%), Positives = 237/569 (41%), Gaps = 86/569 (15%) Query: 1 MERNWN--YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME ++ L+++IV +Q F+ E+K +Q S + Sbjct: 1 MEEGKFGTLIQSLILALLIVIGFQFFF------HRGEEKKELQK-------PTSAKTYSL 47 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D + + V ++ P + + L ++ Y+ L+SP + + Sbjct: 48 QDVPSSKRLGELVTVETPLYTAQFSTVNGKLVKLTVKKYNA---------QLVSPISKEL 98 Query: 119 AYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DE 176 + + + L + NT + K+ + K + +F++ + Sbjct: 99 GVYPLTTVAANPELSKVLVDLNTTPSAKELKVTKAPAKLTFTGKLPDGRVFKKVFTFYPN 158 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y Q++ + I+ P N + +G ++K Sbjct: 159 SYRIDFK--------AQLKGARLQTIV--GPDIKVN--EAHTSRMGHIGPVIETQEKVIR 206 Query: 237 IEKSSISNFHESNS--WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 ++ I F N+ W G DKY+ K+T F + + + + + Sbjct: 207 LKPEEIKGFMSFNNVLWAGEEDKYFLMAV---KDTDFTATVEKVGPKDTLVRNFVGSGI- 262 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 + G KE + + ID+G F F+AKP+ + + Sbjct: 263 -------------FYGGPKELHQLEPL-------GMDSAIDFGIFGFLAKPLLKFFLFLH 302 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 V N+G+ I+L + +K+L PLA K YVS M+ + PK++EL++++ P Q LQ+ Sbjct: 303 KFVPNWGLDIILFVLIIKILLHPLAHKSYVSMKKMQELAPKLEELKKRYGNDP-QKLQEE 361 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 ++LY+ +NP +GC P+LLQIP+FFA+Y++ ++E++ A + WI DL+ D T I Sbjct: 362 TMKLYQEMGVNPASGCLPMLLQIPIFFALYEIFLNAVELKGAS-FLWIPDLSQPDHTYIL 420 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 P++M LSM +Q ++P +K Q I M V+F ++F Sbjct: 421 -------------------PVLMGLSMIVQQLLTPT-TNKQQQKIFILMAVIFTVMFATF 460 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 PAGL++YW +NVI+ +Q +I+K+ + Sbjct: 461 PAGLVLYWFTNNVITAIQNFIILKILEKK 489 >gi|296273897|ref|YP_003656528.1| membrane protein insertase [Arcobacter nitrofigilis DSM 7299] gi|296098071|gb|ADG94021.1| membrane protein insertase, YidC/Oxa1 family [Arcobacter nitrofigilis DSM 7299] Length = 548 Score = 304 bits (778), Expect = 3e-80, Method: Composition-based stats. Identities = 146/594 (24%), Positives = 257/594 (43%), Gaps = 76/594 (12%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEM------------NNERKNIQTVKQPNQVD- 50 + + + A++ + P+ E NN + Q P Sbjct: 11 QKRMLIMTLIVFVFFVAYEYLVLKPQKEAQAAKIAQEKMVKANNAPQVAQDSTNPASAPV 70 Query: 51 ---NSYAAVLIDDRAQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 ++ + V ++ ++ S V + I I+ G + + L ++ ++ Sbjct: 71 SNMSTPSNVADAISSKTIAPSDIVSTITTGKNIIQIDKLG-RIAQVTLLQ-RQYINEDNS 128 Query: 107 IVTLLSPSN--TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 + L P+ FA+ + + A N+E+ S ++ T T I K Sbjct: 129 HIKLFEPNQLRPLEVRFADKNINNEAFNVEVTVSAP---VVDATKQTQTLIITQTLKET- 184 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + +T+++ + + TNN ++P + + G I L Sbjct: 185 --VLTKTLTIYADGHYDLDVKATNN-------KQFFITPGYRPNVLADMYADH-GAIVKL 234 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 D +L + KS + +++ +L D+Y+ +V + + Q + D + Sbjct: 235 ADNTL---DVTVDGKSKETQTYKAVKFLAFFDRYYTTV---AYNFKKNFQVSIMPDKNND 288 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Q + I + G KE T+ P+ +I++GWF FIA Sbjct: 289 PQGFIHSENSFI--------DFSGYMGPKEHKTLKALN-----PQLTGVIEYGWFTFIAN 335 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF+ + + + +GN+G I+ T+ +KL+ FPL+ K +S +K++ PKI EL+EK+K Sbjct: 336 PMFLFLQFLQSYIGNWGWTIVFATIIIKLILFPLSYKGMMSMQKLKDLAPKIKELQEKYK 395 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q M++LYK H NP+ GC P+++QIPVFFA+Y+VI ++E++ +P+ WI D Sbjct: 396 GDK-QKQSAHMMELYKKHGANPMGGCLPLIMQIPVFFALYRVILNAIELKGSPWILWIHD 454 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWM 523 LA DP + PI+M +SMF+Q +++P D+ Q I ++ Sbjct: 455 LALMDPYYVL-------------------PILMGISMFLQQRITPNTMQDETQKKIFQFL 495 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 PVVF F FPAGL +YW +N+ +I QQ I KM + LI+ SK Sbjct: 496 PVVFTFFFLWFPAGLTLYWFINNLFTISQQLFINKMFEKK-KLIEIEEKKASKK 548 >gi|268680016|ref|YP_003304447.1| membrane protein insertase, YidC/Oxa1 family [Sulfurospirillum deleyianum DSM 6946] gi|268618047|gb|ACZ12412.1| membrane protein insertase, YidC/Oxa1 family [Sulfurospirillum deleyianum DSM 6946] Length = 532 Score = 303 bits (777), Expect = 4e-80, Method: Composition-based stats. Identities = 132/574 (22%), Positives = 241/574 (41%), Gaps = 71/574 (12%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 +A LS + + +F++ P+ + +I P S +Q + Sbjct: 10 RVIIATVLSFLFFAFYDHFFI-PKNTPLAETNSSITEQATPASSATSAPEFKEATSSQEI 68 Query: 66 SMSPRV----------ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSP 113 + +P V ++K S I+ G + L Y D + L+ Sbjct: 69 AQTPLVGKESQNEVIVKIKAASYEMHIDRLG-RISKFYLNESKYKDDKGE---RIQLIDA 124 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 S + ++ L + + +++ ++ + + L K I ++I+ Sbjct: 125 SQGVLPLEIRFSDKAVNSDAFLMSYSADKSVV--EVSETGSTVDLTQKLGE-ITLTKSIT 181 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 + + ++N +P A +++ G + D ++ Sbjct: 182 FFPSGKYDLHVKLSNAKD-------YFISPGFRPGAAIDSYTFH-GALIKKADDTVQTIA 233 Query: 234 YSDIE-KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 D + SN +DKY+ + F LS G + Sbjct: 234 DGDAKGDEKFSNARI----AAAADKYYTT------------FFYELSSGLETVILPSKES 277 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + + + G KE+ + P ++++G+F FIAKP+F L+S+ Sbjct: 278 NPLLFVKGNDDFKLSGYVGPKEYVKLKEIH-----PGLTDVVEYGFFTFIAKPLFTLLSF 332 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + + GN+G AI+ T+ V+L+ +PL K VS +K + PK+ EL++K+ Q L Sbjct: 333 LHGIFGNWGWAIVAMTIIVRLVLYPLTYKGMVSMNKLKELAPKVKELQKKYGDDK-QKLN 391 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 M++LYK H NP+ GC PILLQIPVFFA+Y+V+ ++E++ A + W++DLA DP Sbjct: 392 IHMMELYKKHGANPMGGCLPILLQIPVFFAVYRVLQNAIELKGAAWILWVQDLAVMDPYF 451 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M L+MF+ +++P D Q I+ ++P++F F Sbjct: 452 IL-------------------PVLMGLTMFLHQRITPTTFNDPMQEKIMKYLPLIFTFFF 492 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 +FPAGL +YW +N+ SIVQQ + K+ + Sbjct: 493 VTFPAGLTLYWFTNNLASIVQQFYVNKLFAKKQE 526 >gi|242310495|ref|ZP_04809650.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239522893|gb|EEQ62759.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 538 Score = 303 bits (777), Expect = 4e-80, Method: Composition-based stats. Identities = 133/581 (22%), Positives = 252/581 (43%), Gaps = 59/581 (10%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 +A+ L++ + FY P+ +NIQT Q + + + + Sbjct: 11 QTRIIIAVVLALAFFVPYSYFY-SPKENATAKPSQNIQTPSQEQTTPQASIQNVSNTQNS 69 Query: 64 ALSMSPRVELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTKNAYF 121 S +K + I+ G + + L+ YH ++ + L S Sbjct: 70 TDSQEIIATIKAKNFEYKIDRLG-RITQVLLKEEKYH----KDAKDLELFSTDIANQNNP 124 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHYLF 180 L+ + + + +T + I P + NI E+ ++ + + Sbjct: 125 KTLEIRFSDSMLNQQAFSTPYKASQSDITIQDKPQSITLTQKLQNITIEKILTFYPNGYY 184 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 +I V N +P + + V +G I D ++ + D + Sbjct: 185 EIKINVPQN-------YTYFLSPGMRPSVENDAY-VFKGVIIKEQDNTITTIEDGD---A 233 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 S N ++S + D+Y+ ++F F ++ + N + + Sbjct: 234 STQNNFTNSSIIAAVDRYYTTLF-----------FSKTNNLNISILNNAQENPMPFISAN 282 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 F + G K++ + + +L ++++G F AKP+F+L+ Y+L GN+ Sbjct: 283 -GNIELFGYIGPKDYRLLESIDTNLT-----DVVEYGMITFFAKPLFLLLETLYDLCGNW 336 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+L T+ V+++ +PL K VS +K++ PK+ E+++K+K PQ LQ M+ LYK Sbjct: 337 GWAIILLTLIVRIILYPLTYKGMVSMQKLKDLAPKMKEIQQKYKG-EPQKLQAHMMDLYK 395 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 H NP+ GC P+LLQ+PVFFAIY+V+ ++E++ A + WI+DL+ DP + Sbjct: 396 KHGANPMGGCLPLLLQMPVFFAIYRVLYNAIELKGAAWLLWIQDLSVMDPYFVL------ 449 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539 PI+M ++M++Q ++P D Q I ++P++F +FP+GL+ Sbjct: 450 -------------PILMGITMYLQQHLTPATFNDPIQEKIFKFLPLIFTIFFVTFPSGLV 496 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 +YW +N+ SI+QQ +I K + + K+ + Sbjct: 497 LYWFVNNIFSILQQLIINKAMERKKA-REIAEHKEHKHQKA 536 >gi|308185213|ref|YP_003929346.1| putative inner membrane protein translocase component YidC [Helicobacter pylori SJM180] gi|308061133|gb|ADO03029.1| putative inner membrane protein translocase component YidC [Helicobacter pylori SJM180] Length = 548 Score = 303 bits (777), Expect = 4e-80, Method: Composition-based stats. Identities = 140/594 (23%), Positives = 247/594 (41%), Gaps = 80/594 (13%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 +AIALS + + + F+ P + +N AQ Sbjct: 9 LRLILAIALSFLFITLYSYFFQKPNKTTTE--------TTKQETTNNHTTTSPNAPNAQH 60 Query: 65 LSMSPRVELKNPSLIGS-------INLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSP 113 S++ + +N S I+ G + + L+ + L S Sbjct: 61 FSVTQTIPQENLLSTISFEHARIEIDFLG-RIKQVYLKDKKYLTPKQKGFLEHVGHLFSS 119 Query: 114 SNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVFKN 162 EL ++ L NT ++ S L P + L Sbjct: 120 KENAQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLTQDL 178 Query: 163 ANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + +T++ + HY KI NN ++P +++ G Sbjct: 179 GA-LSIIKTLTFYDDLHYDLKIAFKSPNN-----LIPSYVITNGYRPVADLDSY-TFSGV 231 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + DK + + + D ++ I F + +L D+Y+ ++ F + S+ Sbjct: 232 LLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDSQGFEALID--SE 286 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 + F + + G K++ ++ P +I++G Sbjct: 287 IGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLIT 333 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F AK +F+L+ Y Y VGN+G AI+ T+ V+++ +PL+ K VS +K + PK+ EL+ Sbjct: 334 FFAKGVFVLLDYLYQFVGNWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQ 393 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + Sbjct: 394 EKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWIL 452 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI 519 WI DL+ DP I P++M SM+ ++P D QA I Sbjct: 453 WIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPNTMTDPMQAKI 493 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 494 FKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 547 >gi|193213717|ref|YP_001999670.1| 60 kDa inner membrane insertion protein [Chlorobaculum parvum NCIB 8327] gi|254772767|sp|B3QLY4|OXAA_CHLP8 RecName: Full=Inner membrane protein oxaA gi|193087194|gb|ACF12470.1| 60 kDa inner membrane insertion protein [Chlorobaculum parvum NCIB 8327] Length = 587 Score = 303 bits (776), Expect = 5e-80, Method: Composition-based stats. Identities = 121/578 (20%), Positives = 233/578 (40%), Gaps = 44/578 (7%) Query: 1 MERNWNY-FVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 M+RN F IA+ +I+ + Q + P +K+ + + A Sbjct: 1 MDRNSVIGFSLIAVIMIVWLQFMKPEQKTMLDPVPPSREMVQKDAAENAPASAAPETAAE 60 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 L + + + N ++ KGA + L+ + + N L+S N Sbjct: 61 SLGSFAKASTGTEQIITVDNDLFTAELSSKGATLKSMVLKKH---LDVNGKPFNLISEKN 117 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGK-----ILTPTTPIKLVFKNANNILFER 170 A + + + + + + K + V + + Sbjct: 118 KG----ALSMLFLSNDGKRIDTRDLYFRSLDTKKSETVTGKEKLSVSFVLDVDASRSMQV 173 Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPR-----GRIMRHKPQTATNTFGVQEGFIAVL 224 T + + Y+ + N + + G ++ + TA + + Sbjct: 174 TYTFTGDSYVIDYDLKL-NGFGSTLAGNEYQLDWDGGLVYSEKDTADES---HNAISSAY 229 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 L++ D +K W+ + +KY+ + IP +ET DG Sbjct: 230 LGGGLLKLDAKDSKKRYQEEESGKAEWVAVRNKYFVAAMIPERETEGVFLQGTKKDGVDF 289 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY---- 340 + + S+T L+ G ++ T+ DL E ++D+GW + Sbjct: 290 ENYTAALKMMIPAGQNSVTDRYRLYVGPLDYNTVRSLHVDL-----EKIMDFGWDWLTRP 344 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F + + ++ V N+G+ I++ +K + +PL+ S M +QP + E++ Sbjct: 345 FAEYLILPIFNWMNKYVTNYGLIIIIFAFLIKTVTWPLSLASTKSMKKMSALQPMMKEIQ 404 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K P + LQ + ++YK +NPL GC P ++Q+P+ FA++ V S+++R + Sbjct: 405 EKYKNDPAK-LQSELGRIYKEAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQLRQHG-FL 462 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 W+KDL+ D +I LP Y H+ + PI+M++++F Q K++P Q I+ Sbjct: 463 WVKDLSVPD--SILDFGFKLPLYGD---HIALMPILMAVTVFFQQKITPTTQTNDQMKIM 517 Query: 521 NWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 WM P + + ++ P+GL +Y+ NV SI QQA I Sbjct: 518 IWMFPAMMLLFFNNMPSGLALYYLMFNVFSIAQQAYIN 555 >gi|194335113|ref|YP_002016973.1| 60 kDa inner membrane insertion protein [Prosthecochloris aestuarii DSM 271] gi|254773012|sp|B4S6X1|OXAA_PROA2 RecName: Full=Inner membrane protein oxaA gi|194312931|gb|ACF47326.1| 60 kDa inner membrane insertion protein [Prosthecochloris aestuarii DSM 271] Length = 584 Score = 302 bits (774), Expect = 9e-80, Method: Composition-based stats. Identities = 119/580 (20%), Positives = 242/580 (41%), Gaps = 48/580 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + + L +I+ W F + + ++ + ++ + V + AA + Sbjct: 1 MD--RNSVIGLVLISLIMIVWMQFMAPEKKPLQDIDKPAVSLQEEVSPVSDIPAAAATPE 58 Query: 61 R-----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 A + + + N ++ +GA + L+ + + S+ L+ ++ Sbjct: 59 SYGEFSAMSDGEEKLLTVDNEYFTAVLSSRGATLKSMMLKKH---LDSSREQFNLIRKND 115 Query: 116 TKNA---YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 + + + ++ + T + G + +L NI+ T Sbjct: 116 SGALSLFFLTQAGKQIDTRDLYFSTAVTESQVTVGADNQFSVTYRLDVAPEKNIVITYTF 175 Query: 173 SLDEHYLFKIVDTVTNNS------IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 S + Y ++ N ++ + G ++ + + + A Sbjct: 176 S-GDSYAIG--YDISMNGFASEIAGNEFQLQWDGGLVHSEKNDDDE---LHNSWAAAYMG 229 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 SL++ SD K+ W+ KY+ + IPS ET G Sbjct: 230 GSLLKLDASDQSKTYREEQSGVAGWVAARTKYFVAAMIPSSETEGVYLAGKRLAGEPFEN 289 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY------ 340 + S + L+ G ++ ++ +L E ++D+GW + Sbjct: 290 YTTALKFRVPSDESSFKESLRLYVGPIDYNVLNALGVNL-----EKIMDFGWDWLTRPFA 344 Query: 341 -FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +I P+F L++ F +GN+G+ I++ +KL+ +PL S M +QP + E+ Sbjct: 345 EYIILPIFDLLNKF---IGNYGLIIIIFAFLIKLVTYPLTMASTKSMKKMSALQPMMKEI 401 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +EK+K +P + LQ + ++YK +NPL GC P++LQ+P+ FA++ V S+++R + Sbjct: 402 QEKYKDNPAK-LQSELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQLRQHG-F 459 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM- 518 W DL+ D +I +P Y H+ ++PI+M++++F+Q K++P Q Sbjct: 460 LWANDLSVPD--SILDFGFSIPLYGD---HIALFPILMAVAVFLQQKITPTAQTNDQMKA 514 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ PV+ + ++ PAGL +Y+ NV SI Q I K Sbjct: 515 MIYIFPVMMLLFFNNMPAGLGLYYLMFNVFSIAQTWYINK 554 >gi|317014863|gb|ADU82299.1| membrane protein insertase [Helicobacter pylori Gambia94/24] Length = 547 Score = 302 bits (774), Expect = 1e-79, Method: Composition-based stats. Identities = 141/584 (24%), Positives = 245/584 (41%), Gaps = 80/584 (13%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 +AIALS + + + F+ P K + +N AQ Sbjct: 9 LRLILAIALSFLFIALYSYFFQKPN--------KPTTETTKQETTNNHATTSPNAPNAQH 60 Query: 65 LSMSPRVELKNPSLIGS-------INLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSP 113 S++ + ++ S I+ G + + L+ + L S Sbjct: 61 FSVTQTIPQESLLSTISFEHARIEIDSLG-RIKQVYLKDKKYLTPKQKGFLEHVGHLFSS 119 Query: 114 SNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVFKN 162 EL ++ L NT ++ S L P + L Sbjct: 120 KENAQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLTQDL 178 Query: 163 ANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + + +T++ + HY KI NN ++P +++ G Sbjct: 179 GD-LSIIKTLTFYDDLHYDLKIAFKSPNN-----LIPSYVITNGYRPVADLDSY-TFSGV 231 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + DK + + + D ++ I F + +L D+Y+ ++ F + S+ Sbjct: 232 LLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDSQGFEALID--SE 286 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 + F + + G K++ ++ P +I++G Sbjct: 287 IGTKNPLGFIS--------LKNEADLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLIT 333 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F AK +F+L+ Y Y VGN+G AI+ T+ V+L+ +PL+ K VS +K + PK+ EL+ Sbjct: 334 FFAKGVFVLLDYLYQFVGNWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQ 393 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + Sbjct: 394 EKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWVL 452 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI 519 WI DL+ DP I P++M SM+ ++P D QA I Sbjct: 453 WIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPNTMTDPMQAKI 493 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P++F L +FPAGL++YW+ +N++S++QQ +I K+ + Sbjct: 494 FKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENK 537 >gi|262200044|ref|YP_003271253.1| membrane protein insertase, YidC/Oxa1 family [Haliangium ochraceum DSM 14365] gi|262083391|gb|ACY19360.1| membrane protein insertase, YidC/Oxa1 family [Haliangium ochraceum DSM 14365] Length = 672 Score = 302 bits (773), Expect = 1e-79, Method: Composition-based stats. Identities = 137/624 (21%), Positives = 243/624 (38%), Gaps = 77/624 (12%) Query: 1 MERN-WNYFVAIALSVIIVYAWQNFYV-------------------YPRIEEMNNERKNI 40 ME +A+ L+ +++ W + P + N Sbjct: 1 MEEQSKRLLLAVGLAFVVMMGWTYLFPPEPPPEEVPSAEQSAGSEETPDKPALPKPTLNR 60 Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR--GYH 98 + D + A L + + E + GA L Y Sbjct: 61 ADQTGDSAGDGTGAIGLAEAQPAQRGEEQLYEFRFDKFRAVFTSHGATLKSWELLGDKYR 120 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 ++ + L+ P ++ +L + ++L + T W + T I Sbjct: 121 GGEGEDAKPLDLV-PLKDESLLPFQLGF----EGVDLLPAQTEWRVE----RQDETTIDF 171 Query: 159 VF-----KNANNIL---FERTISL-DEHYLFKIVDTVTNNSIDQ----IRFSPRGRIMRH 205 ++ +N ++ ++ L E +L ++ +V N + + + S G Sbjct: 172 LWSYTAEQNGEEVVLFDIVKSYRLYPEQFLVELNVSVENRNASEQDLELVLSMFGY---Q 228 Query: 206 KPQTATNTFGVQ---EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASV 262 P A+ + L D+ L Q D+E+ + +W G++ Y+ Sbjct: 229 DPNAASGGWFASIDLTWKGGCLIDEELETQTVEDLEEGAF-FQKGDLAWTGLTHNYFLFA 287 Query: 263 FIPSKETSFHS--QFKYLSDGHARYQAKFSANEITILPGKSITTTNFL-FAGAKEFPTIH 319 P +T + + +A + G + + + G K + Sbjct: 288 ASPKNDTDARIGCRLSTVEGETGVMRADILFPAFRVRAGDPRMLRSVVAYIGPKYVDKLE 347 Query: 320 HYEKDLA-IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 +A P FE +D GWF F A P+ L+ F +LVGN+G+AI+L TV VKL P Sbjct: 348 AIPGVIAHNPHFEKSVDLGWFGFFAAPLLWLLRMFESLVGNWGVAIVLLTVLVKLTLLPF 407 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 K S M ++PKI+ L++K+K Q Q+ M+ LY+TH +NP+AGC P+LLQ+P Sbjct: 408 TTKSMRSMKQMSKLRPKIEALQKKYKDD-RQRQQEEMMALYRTHGVNPVAGCLPMLLQMP 466 Query: 439 VFFAIYKVISISLEMRHAP-FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 ++FA+Y+++ + E+ HAP GWI DL A DP I PI++ Sbjct: 467 IWFALYRMLMTAGELYHAPLVPGWIDDLTAVDPYYIL-------------------PILL 507 Query: 498 SLSMFIQMKMSPPPAD-KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + MF+Q K+SP D Q M++ +P+ F P+GL +Y + ++ V I Sbjct: 508 VVMMFLQAKLSPTQPDSPQQKMMMYGLPLSFGVFSFFLPSGLTLYILTNTFLTAVHHIWI 567 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580 + + +S ++ Sbjct: 568 NHSDPVAKPVSEVKKSGEDAKPSA 591 >gi|208435316|ref|YP_002266982.1| 60 kDa inner-membrane protein [Helicobacter pylori G27] gi|208433245|gb|ACI28116.1| 60 kDa inner-membrane protein [Helicobacter pylori G27] Length = 548 Score = 302 bits (773), Expect = 1e-79, Method: Composition-based stats. Identities = 142/592 (23%), Positives = 251/592 (42%), Gaps = 82/592 (13%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERK---NIQTVKQPNQVDN----SYAAVLIDD 60 +AIALS + + + F+ P ++ N T PN + + + + Sbjct: 12 ILAIALSFLFIALYSYFFQKPNKTTTQTTKQETTNNHTATSPNAPNAQNFGTTQTIPQES 71 Query: 61 RAQALS-MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSPSN 115 A+S R+E+ + + + L+ + L S Sbjct: 72 LLSAISFEHARIEIDSL----------GRIKQVYLKDKKYLTPKQKGFLEHVGHLFSSKE 121 Query: 116 TKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVFKNAN 164 EL ++ L NT ++ S L P + L Sbjct: 122 NAQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLTQDLGA 180 Query: 165 NILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 ++ +T++ + HY KI NN ++P +++ G + Sbjct: 181 -LIIIKTLTFYDDLHYDLKIAFKSPNN-----LIPSYVITNGYRPVADLDSY-TFSGVLL 233 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 DK + + + D ++ I F + +L D+Y+ ++ F + S+ Sbjct: 234 ENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEALID--SEIG 288 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 + F + + G K++ ++ P +I++G F Sbjct: 289 TKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFF 335 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K + PK+ EL+EK Sbjct: 336 AKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEK 395 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI Sbjct: 396 YKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWI 454 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILN 521 DL+ DP I P++M SM+ ++P D QA I Sbjct: 455 HDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPNTMTDPMQAKIFK 495 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 496 LLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRMHAQNKKE 547 >gi|212704368|ref|ZP_03312496.1| hypothetical protein DESPIG_02423 [Desulfovibrio piger ATCC 29098] gi|212672206|gb|EEB32689.1| hypothetical protein DESPIG_02423 [Desulfovibrio piger ATCC 29098] Length = 423 Score = 302 bits (773), Expect = 1e-79, Method: Composition-based stats. Identities = 123/433 (28%), Positives = 201/433 (46%), Gaps = 28/433 (6%) Query: 132 NIELPNSNTVWNLISGKILT----PTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTV 186 N + S W L S ++ ++LV + N + R ++ + E+YL ++ Sbjct: 8 NGQPSWSTGKWALESDSGVSVAEGGKGVVRLVGEVDN-LRVTRELTFNSENYLISEKVSL 66 Query: 187 TNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 D R + A + +A SL E+ +D Sbjct: 67 ATLGTDTRSVRVRYTVAADTSNAANTNYDAMR--VAWDNGGSLGEETSTDKLTKEGVEAS 124 Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTN 306 W G Y+ S +P + + Y+ E+ + PG+ T Sbjct: 125 GKLYWAGPMSTYFLSAVMPGDADEARMVGRMQG---SVYRVALEPKEVVVAPGQETTLEV 181 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 + G KE + LA + +D G F IAK + L+ +F N+G++I++ Sbjct: 182 SYWMGPKERKMLAAVSDQLA-----LSVDLGMFSIIAKGLLWLLEFFQQYTHNWGLSIIM 236 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 T+ +K +F+PL K Y S MK +QP + +REK+K + + K ++ LYKT+ +NP Sbjct: 237 LTIVIKAVFWPLTAKSYSSMEKMKKLQPMMANIREKYKDDK-EAMNKEVMALYKTYGVNP 295 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 +GC PIL+Q+PVFF +Y+ + S+E+RHAPF I L D + L P+Y+ Sbjct: 296 ASGCVPILVQLPVFFGLYQALLTSIELRHAPF---ITYLPGTDLIWLADLSSKDPYYIT- 351 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 PIIM ++MF+Q KMSPP D Q I+ ++P+VF SFP+GL++YW +N Sbjct: 352 -------PIIMGITMFLQQKMSPPATDPTQQKIMMFLPIVFTALFLSFPSGLVVYWLVNN 404 Query: 547 VISIVQQAVIMKM 559 ++SI QQ + + Sbjct: 405 ILSIAQQWRMGRR 417 >gi|188528220|ref|YP_001910907.1| putative inner membrane protein translocase component YidC [Helicobacter pylori Shi470] gi|188144460|gb|ACD48877.1| putative inner membrane protein translocase component YidC [Helicobacter pylori Shi470] Length = 546 Score = 301 bits (772), Expect = 2e-79, Method: Composition-based stats. Identities = 141/595 (23%), Positives = 249/595 (41%), Gaps = 72/595 (12%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N +AIALS + + + F+ P ++ + A Sbjct: 1 MDKNNNANIRLILAIALSFLFIAIYSYFFQKPNKTTTPTTKQETTNNHTTTNPNTPNAFN 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLS 112 Q +S + I+ G + + L+ + L + Sbjct: 61 ATQAIPQENLLS---TISFEHARIEIDSLG-RIKQVYLKDKKYLTPKQKGFLEHVSHLFN 116 Query: 113 PSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVFK 161 P EL ++ L NT ++ S L P + L Sbjct: 117 PKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLTQD 175 Query: 162 NANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + +T++ + HY +I N +KP +++ G Sbjct: 176 LGA-LTIIKTLTFYDDLHYDLQIAFKSPNK-----IIPSYVITNGYKPVADLDSY-TFSG 228 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + DK + + + D ++ I F + +L D+Y+ ++ F + S Sbjct: 229 VLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEALID--S 283 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 + + F + + G K++ ++ P +I++G Sbjct: 284 EIGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLI 330 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL Sbjct: 331 TFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKEL 390 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + Sbjct: 391 QEKYK-DEPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWI 449 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAM 518 WI DL+ DP I P++M SM+ ++P D QA Sbjct: 450 LWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPSSVTDPMQAK 490 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 491 LFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545 >gi|307638101|gb|ADN80551.1| Inner membrane protein translocase component [Helicobacter pylori 908] gi|325996702|gb|ADZ52107.1| Inner membrane protein translocase component [Helicobacter pylori 2018] gi|325998294|gb|ADZ50502.1| putative inner membrane protein translocase component [Helicobacter pylori 2017] Length = 547 Score = 301 bits (772), Expect = 2e-79, Method: Composition-based stats. Identities = 140/594 (23%), Positives = 249/594 (41%), Gaps = 80/594 (13%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 +AIALS + + + F+ P K + +N AQ Sbjct: 9 LRLILAIALSFLFIALYSYFFQKPN--------KPTTETTKQETTNNHTTISPNAPNAQH 60 Query: 65 LSMSPRVELKNPSLIGS-------INLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSP 113 S++ + ++ S I+ G + + L+ + L S Sbjct: 61 FSVTQTIPQESLLSTISFEHARIEIDSLG-RIKQVYLKDKKYLTPKEKGFLEHVGHLFSS 119 Query: 114 SNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVFKN 162 EL ++ L NT ++ S L P + L ++ Sbjct: 120 KENSQPSLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLT-QD 177 Query: 163 ANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + +T++ + HY KI +NN ++P +++ G Sbjct: 178 LGVLSIIKTLTFYDDLHYDLKIAFKSSNN-----LIPSYVITNGYRPVADLDSY-TFSGV 231 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + DK + + + D ++ I F + +L D+Y+ ++ F + S+ Sbjct: 232 LLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEALID--SE 286 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 + F + + G K++ ++ P +I++G Sbjct: 287 IGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLIT 333 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F AK +F+L+ Y Y VGN+G AI+ T+ V+++ +PL+ K VS +K + PK+ EL+ Sbjct: 334 FFAKGVFVLLDYLYQFVGNWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQ 393 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + Sbjct: 394 EKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWVL 452 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI 519 WI DL+ DP I P++M SM+ ++P D QA I Sbjct: 453 WIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPNTMTDPMQAKI 493 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 494 FKLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRVHAQNIKE 547 >gi|225848362|ref|YP_002728525.1| 60 kDa inner-membrane protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225643468|gb|ACN98518.1| 60 kDa inner-membrane protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 514 Score = 301 bits (772), Expect = 2e-79, Method: Composition-based stats. Identities = 148/574 (25%), Positives = 262/574 (45%), Gaps = 77/574 (13%) Query: 1 MERNWNYFVAIALSVIIV---YAWQNFYVYPRIE-EMNNERKNIQTVKQPNQVDNSYAAV 56 M++ F A+ S + + Q F+ + E +++++ I P Q ++ + Sbjct: 6 MQKRMLIFFAVV-SFLFISFTVISQFFFPENKKESPQSSQKQEINNQNIPIQTSGNFDLI 64 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 L ++R L S +++K G + + + Y+ D+ S+ S N Sbjct: 65 LTNERVN-LDTSKNIKVKTKFGYIEFTPFGGRITSVYVEKYNHDMISD------FSKKN- 116 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 + EL PN + N + I + N + E+T ++ + Sbjct: 117 -KIFIGEL-------ITSNPNLTRILNFSEYTVSQNNKEITFKLEKEN-VSIEKTYTIQD 167 Query: 177 HYLFKIVDT---VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 + I + N S+ ++ + +FG EG I DK L+ Sbjct: 168 DGVISIAVKTKGIENTSVA---------LLSGVSLNSEGSFG-HEGAIIKT-DKDLIRI- 215 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D E ++ W G +KY+ +F P T+ + D Sbjct: 216 --DKELKQPQIIRDNILWAGEENKYFLQIFAPKNGTNTVNVIPVAKD------------T 261 Query: 294 ITILPGKSITTTNFLFAGAKEFPTI---HHYEKDLAIPRFEM--LIDWGWFYFIAKPMFM 348 +L S F+++GAK + + Y KDL ++ ID+G+F + KP+F+ Sbjct: 262 TAVLVNVSPDFEGFIYSGAKLYSILGQITDYYKDLWKVDLDLRSSIDFGFFGILGKPLFL 321 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ +FY + N+G+AI++ TV +++LFFPL K + M ++ P+I++L++K+ + P Sbjct: 322 LLHFFYTYIPNWGVAIIILTVLIRILFFPLNHKSLKAMRKMADLAPEIEKLKKKYAKDP- 380 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q LQ+ +++LY NP++GC PIL+QIPVF A+Y V+ +++E+++APF WIKDL+ Sbjct: 381 QKLQEEIMKLYAEAGANPMSGCLPILVQIPVFIALYNVLMVTVELKNAPFILWIKDLSDK 440 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I PI+M LSM Q ++P +DK Q MI+ M VF Sbjct: 441 DPYYIL-------------------PILMGLSMIAQQWITPS-SDKNQKMIMYIMAGVFT 480 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +FPAGL++YW +N++ ++Q ++ K Sbjct: 481 FMFMNFPAGLVLYWLTNNILGLLQSFIVNKTMKK 514 >gi|189218938|ref|YP_001939579.1| preprotein translocase subunit YidC [Methylacidiphilum infernorum V4] gi|189185796|gb|ACD82981.1| Preprotein translocase subunit YidC [Methylacidiphilum infernorum V4] Length = 592 Score = 301 bits (772), Expect = 2e-79, Method: Composition-based stats. Identities = 114/606 (18%), Positives = 244/606 (40%), Gaps = 74/606 (12%) Query: 9 VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS 68 + +S++++ AWQ + Y + + + + + + + + ++++ + ++ Sbjct: 9 IGFGISLVLLLAWQIYVEYRYVRQQPSPVEQTPSALPNSSEETASGQQPLNNQQENQTLG 68 Query: 69 PRVE--------------LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 P L+N + + G ++ L+ + + L Sbjct: 69 PLESFEKSPDLGKEIVHYLENDKIRVAFTSWGGAIQNIELKEHFFRGPKGKENILLNRFD 128 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 + L ++ +NL + + I + ER SL Sbjct: 129 EEP--------------LLNLSGWDSKYNLSGYQSESKEGKIFFRRDLPGGVTVERIFSL 174 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRG---------RIMRHKPQTATNTFGV---QEGFIA 222 + Y + + N S + I A N + + G I Sbjct: 175 GQDYQVIMEQRLINRSSLPVTLPSYRVNMGLASPIHIKEAIQNLAVNWLTLKGSRFGRIG 234 Query: 223 V--LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF--------- 271 + + Y ++ IS+ +E W+ + ++Y+A V P Sbjct: 235 LPDFNAAGFLGLFYWRGPRTVISSPNEPLRWVAVKNQYFAIVVSPPSTLPPIQIEAVPVE 294 Query: 272 HSQFKYLSDGHARYQAKFSA----NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 SQF A+ A E+++ P ++ + G KE+ + Sbjct: 295 LSQFPLEQSSQAQVPVGIKAWAYFPELSLQPNSILSVQFKTYGGPKEYARLKKLGD---- 350 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + ++++G + ++ KP+ M +F++ + N+G+ I+L T+ +K +F+PL K + Sbjct: 351 -HIDRVMEYGMWGWVVKPLVWCMVHFHSFIPNYGLDIILFTLLLKGIFWPLQSKANRNMK 409 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ + PK+ EL+ ++K P +Q M++LY+ + +NPL GC P+L+QIP+F Y ++ Sbjct: 410 AMQALSPKLKELQARYK-DQPDKMQAEMMKLYREYGVNPLGGCLPMLVQIPIFIGFYTML 468 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+E+R+ + WI+DL D G+ + P+IM + + +M Sbjct: 469 QGSVELRNQS-FLWIRDLTKPDTIFHIPTLGLD---------INPLPLIMVGTQILLSRM 518 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 +P +D Q + WMPV F+ +F + L +YW+ +N+++IVQ + + ++ Sbjct: 519 TPQASDNPQLKVFQWMPVFFLVFFYNFASALSLYWTVNNLVTIVQTY---RNLKKPLPVL 575 Query: 568 DRLRST 573 R++ Sbjct: 576 HRVKKQ 581 >gi|315585837|gb|ADU40218.1| inner membrane protein OxaA [Helicobacter pylori 35A] Length = 546 Score = 301 bits (771), Expect = 2e-79, Method: Composition-based stats. Identities = 142/595 (23%), Positives = 248/595 (41%), Gaps = 72/595 (12%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N +AIALS + + + F+ + Q + NS Sbjct: 1 MDKNNNTNIRLILAIALSFLFIAIYSYFF---QKPNQTTTPTTKQETTNNHTATNSNTPN 57 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLS 112 + + + I+ G + + L+ + L + Sbjct: 58 AFNTTQTIPQENLLSTISFEHARIEIDSLG-RIKQVYLKDKKYLTPKQKGFLEHVSHLFN 116 Query: 113 PSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVFK 161 P EL ++ L NT ++ S L P + L Sbjct: 117 PKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLTQD 175 Query: 162 NANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + +T++ + HY +I NN +KP +++ G Sbjct: 176 LGA-LTIIKTLTFYDDLHYDLQIAFKSPNN-----IIPSYVITNGYKPVADLDSY-TFSG 228 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + DK + + + D ++ I F + +L D+Y+ ++ F + S Sbjct: 229 VLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEALID--S 283 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 + + F + + G K++ ++ P +I++G Sbjct: 284 EIGTKNPLGFIS--------LKNGANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLI 330 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 F AK +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL Sbjct: 331 TFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKEL 390 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + Sbjct: 391 QEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWI 449 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAM 518 WI DL+ DP I P++M SM+ ++P D QA Sbjct: 450 LWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPSSVTDPMQAK 490 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 491 IFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQNKKE 545 >gi|145220572|ref|YP_001131281.1| protein translocase subunit yidC [Prosthecochloris vibrioformis DSM 265] gi|189036356|sp|A4SH20|OXAA_PROVI RecName: Full=Inner membrane protein oxaA gi|145206736|gb|ABP37779.1| protein translocase subunit yidC [Chlorobium phaeovibrioides DSM 265] Length = 580 Score = 300 bits (767), Expect = 6e-79, Method: Composition-based stats. Identities = 122/581 (20%), Positives = 234/581 (40%), Gaps = 53/581 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N +AL +I+ W F + + K +V+Q N D Sbjct: 1 MD--RNSVTGLALIALIMIVWLQFMSPDKKPVIRESAKKAASVEQVNVPLKPAPVSASDA 58 Query: 61 ----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + A + ++ ++N +I+ KGA L L+ + + V L+S Sbjct: 59 FGAFASAANGKARKMVVENDLFRATISSKGATLTSLVLKKH---LDGALQPVQLVSNRAD 115 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT-----PIKLVFKNANNILFERT 171 A T ++ + + S L T ++ + N T Sbjct: 116 G----ALSLLFLTREGRKIDTRDLYFTGGSVDTLHTVTGKESYSVRYRLNVSKNRNILIT 171 Query: 172 ISLD-EHYLFKIVDTVT-NNSIDQIRFSPR--------GRIMRHKPQTATNTFGVQEGFI 221 S + Y ++ V N + + G +++ A Sbjct: 172 YSFTGDSY--RVGYDVQLNGFSSALAGNEYQLQWDGGLGYTEKNREDEA------HNALA 223 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 SLV+ + ++ W+ + +KY+ + IP+ T G Sbjct: 224 GAYLGGSLVKLDAAKDNQAYREEQSGEAKWVAVRNKYFVAALIPAGPTGGFYLDGSKKAG 283 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY- 340 + S + G S+ + L+ G ++ + + +L E ++D+GW + Sbjct: 284 NEFENYLASLKMEVPVSGASLDNSFSLYMGPLDYDIVRAQKAEL-----EKIMDFGWDWL 338 Query: 341 ---FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F + + S+ + N+G+ I++ +KL+ +PL+ S M +QP + Sbjct: 339 TRPFAEYIILPVFSWMNKFIHNYGLIIIIFAFLIKLVTYPLSLASTKSMKKMAALQPMLK 398 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 EL++K+K +P + LQ + ++YK +NPL GC P++LQ+P+ FA++ V S+E+R Sbjct: 399 ELQDKYKDNPAK-LQSELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIELRQHG 457 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W DL+ D +I L +P Y H+ + PI+M+ ++F+Q K++P Q Sbjct: 458 -FLWAHDLSVPD--SILNLGFTIPMYGD---HIALMPILMAGTVFVQQKITPTAQTNDQM 511 Query: 518 MIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 I+ P + + ++ P+GL +Y+ NV S+ QQ I Sbjct: 512 KIMLYMFPAMMLLFFNNMPSGLGLYYLMFNVFSVAQQFYIN 552 >gi|193216427|ref|YP_001997626.1| 60 kDa inner membrane insertion protein [Chloroherpeton thalassium ATCC 35110] gi|254772769|sp|B3QYV6|OXAA_CHLT3 RecName: Full=Inner membrane protein oxaA gi|193089904|gb|ACF15179.1| 60 kDa inner membrane insertion protein [Chloroherpeton thalassium ATCC 35110] Length = 586 Score = 299 bits (765), Expect = 9e-79, Method: Composition-based stats. Identities = 121/610 (19%), Positives = 249/610 (40%), Gaps = 54/610 (8%) Query: 1 MERNWNYFVAIALSVIIVYAW-QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ N + + L +I+ AW Q + E +++ ++ V + + N + Sbjct: 1 MD--RNTLIGLVLIALIMMAWFQLMAPKKPLPEEKAQQERLEAVAESIDIKNQLVQDSLQ 58 Query: 60 DRAQ----------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 A+ +++++ +++ KGA + Y + P Sbjct: 59 KANPTQKFGELGQFAVGEEKKIQIETDLFTATLSTKGATLRSFIQKDYLN--YKHEPFNL 116 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNL--ISGKILTPTTPIKLVFKNANNIL 167 + + T + +FA D + T ISG I + Sbjct: 117 ISNEDGTLSLFFATRDGKVVNTGELYFDPKTDQKNFRISGD---NKVRIPFEISTEDGRR 173 Query: 168 FERTISLDEH-YLFKIVDT-------VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 E T + Y F V+ N + ++ ATN++ Sbjct: 174 IEITYIFSGNSYEFGYETNLAGFGKFVSGNEYQVVWTGGLSNAEKNVNDEATNSYAE--- 230 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS--FHSQFKY 277 A LG +L S ++++ + W+ + KY+ + I +ET F + Sbjct: 231 --AYLGGSTLR-LDASHVDETYKEQPSGNAKWVAVRSKYFVAGLISKEETEGVFMEGSRN 287 Query: 278 LSDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 +D + ++ A ++ + ++ + ++ G ++ + +L E +ID+ Sbjct: 288 TNDEKSVFEDYMVALKLKLPSDQTTVNSRFSVYIGPLKYDLVKATGSEL-----EKIIDF 342 Query: 337 GWFY----FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 GW + F + + ++ N V ++G+ I+L +F+KL+ +PL S M + Sbjct: 343 GWEWVTRPFAEYLIIPIFNFLNNHVDSYGVIIILFALFIKLVTYPLTMASTKSMKKMAAL 402 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP++ ++E++K +P + LQ + +Y+ +NPL GC P ++Q+P+ FA++ V S++ Sbjct: 403 QPQLKAIQEQYKDNP-EKLQAEISGIYREAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQ 461 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +R + W DL+ D +I L +P Y HV + PI+M +++F Q K++P Sbjct: 462 LRQEG-FLWSNDLSVPD--SILDLPFSIPLYGD---HVSVIPILMGVAVFFQQKLTPSTQ 515 Query: 513 DKGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 Q ++ P + + ++ P+GL +Y+ NV SI QQ I + E ++ Sbjct: 516 TNDQMKFMMYLFPGMMLIFFNNMPSGLGLYYLMFNVFSIAQQFYINQTTETEPVVLKDKS 575 Query: 572 STFSKNYNSQ 581 +K + Sbjct: 576 KQKAKPARKK 585 >gi|302336556|ref|YP_003801762.1| membrane protein insertase, YidC/Oxa1 family [Spirochaeta smaragdinae DSM 11293] gi|301633741|gb|ADK79168.1| membrane protein insertase, YidC/Oxa1 family [Spirochaeta smaragdinae DSM 11293] Length = 585 Score = 298 bits (764), Expect = 1e-78, Method: Composition-based stats. Identities = 127/610 (20%), Positives = 248/610 (40%), Gaps = 71/610 (11%) Query: 1 MERNWNYFVAIALSVIIV-YAW--QNFYVYPRIEEMNNERKNIQTVKQPNQVDNS----- 52 M+ +A+ LS I++ + QN + P + E + + N D S Sbjct: 1 MD--KRTLLAVILSTIVISVGFMIQNTFFAPPLPESPAVTEQAEASGNTNASDGSVSSND 58 Query: 53 ---YAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 +AQ + V L + + +GA + L+ + + Sbjct: 59 NSQQQPTAPVLQAQGIIPFGDEPGEKMVSLDTKVFKATFSSRGALLTSMKLKEHFENGE- 117 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELP------NSNTVWNLISGKILTPTTPIK 157 P+ + ++ + A+ +P + NT+ + T + P+ Sbjct: 118 --PLEMIWRGNDAEGAFGISFGG-PEREIAHVPFFVRNIDENTLEFYREFAVQTSSGPVP 174 Query: 158 LVFKNANNILFERTISLD-EHYLFKIVDTVTN--NSIDQIRFSPRGRIMRHKPQTAT--- 211 + + YLF+++ + N N+ + + PQ Sbjct: 175 FT--------LTKRFRFNPSDYLFEVLVKIENSVNAYPALDEDGYAYTLSFGPQIGPQVE 226 Query: 212 ---NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 + + F G + K+ + SW + KY+A + +P Sbjct: 227 KMDGRYAYRRYFTYENGKQKNYR------MKNGSVSVDNRVSWAAVLGKYFAVIGVPDA- 279 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK----- 323 T + F S+ ++ + + S + G K + Y Sbjct: 280 TDYDLLFTEGSEPGLPTTSRLFFSRPPLKSSVS-EDVFRFYMGPKISRVLTQYNDPDKNG 338 Query: 324 -DLAIPRFEMLIDWGWF-YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 E ++D G ++ M L+ +FY+++ N+G+AI+L T+ VK++ FP+ K Sbjct: 339 FGTRDLHLEEVMDQGRLLGWLEVIMKKLLVFFYSIIPNWGVAIILLTILVKVVLFPITHK 398 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Y ST+ M+ +QPK+ E+++K++ +P + + + M +LYK +NP+ GC P+LLQ+P+F Sbjct: 399 SYESTSKMQMLQPKMKEIQDKYRDNPNK-MNQEMAELYKREKVNPMGGCLPMLLQMPMFI 457 Query: 442 AIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y + + ++R + F GWI DL++ + F F I + G+ + + P+ + Sbjct: 458 AMYGLFNKYFDLRGSSFIPGWITDLSSPESVYSFAPFKIP---ILGWSDIRLLPMFFVAT 514 Query: 501 MFIQMKMSPPP-----ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 M + KM+ P + M+ MP+ F F L + P+GL++YW +NV++I QQ Sbjct: 515 MILSSKMTQSPSSAGSQNSSMKMMTYMMPIFFFFFLYNAPSGLLVYWIVTNVLTIGQQKA 574 Query: 556 IMKMHGAEIG 565 I K+ + Sbjct: 575 ISKIQKRKEE 584 >gi|284097721|ref|ZP_06385731.1| 60 kDa inner membrane insertion protein [Candidatus Poribacteria sp. WGA-A3] gi|283830767|gb|EFC34867.1| 60 kDa inner membrane insertion protein [Candidatus Poribacteria sp. WGA-A3] Length = 485 Score = 298 bits (764), Expect = 1e-78, Method: Composition-based stats. Identities = 138/495 (27%), Positives = 222/495 (44%), Gaps = 72/495 (14%) Query: 86 GAQFDDLNLRGYHLDVSSNSP-IVTLLSPSNTKNAYFA----ELDYVSTANNIELPNSNT 140 GAQ L+ Y L + P + + P A + D + N+ S Sbjct: 1 GAQIQSWKLKQY-LTQDEDDPEPIEFVYPEGHFAGPLALQVEDSDVNAMLNDGLFEVSRD 59 Query: 141 VWNLISGKILTPTTPIKLVFKN-ANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSP 198 L + PT + L ++N NNIL E+ + + YL + V +D Sbjct: 60 FDTLDD---VHPTGHLTLSYRNDENNILVEKEFTFTHDSYLVDVAIRVA--GLDDAVGVL 114 Query: 199 RGRIMRHKPQTATNTFGVQE---GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGIS 255 G FG+ E G I LG +++ + W + Sbjct: 115 LGT-----------NFGMVEWGQGLIGALGPAWMIDGELEKETPDPEIRRSGDIRWAALQ 163 Query: 256 DKYWASVFIPS--KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 DKY+ SV IP + ++ Y+ + + + + L+AG K Sbjct: 164 DKYFISVMIPQGAQGVFAKAETDYVVTSGVEFPVEAEGSRLRFQ----------LYAGPK 213 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYF--------IAKPMFMLMSYFYNLVGNFGIAIM 365 +F + L E ID+GWF + +AKP+F ++ + Y N+G+AI+ Sbjct: 214 QFDLMRSLGHSL-----EDTIDFGWFIYGSWSVVKAVAKPLFYVLRFLYEYTQNYGVAII 268 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 L T +KLLF PL K Y S M+ IQPKI ++ KFK+ + L + +++LYK H +N Sbjct: 269 LLTCGIKLLFVPLQYKSYKSMQGMQKIQPKIQAVQAKFKED-RERLNRELMKLYKEHKVN 327 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P+ GC P++LQ+PVF +++ ++ +++++R+APF WI DL+ DP +F Sbjct: 328 PVGGCLPMVLQMPVFISLFNILYMTVDLRNAPFALWITDLSIPDPFYVF----------- 376 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 PI+M SM +Q K+ P D QA ++ +PV F +FPAGL+IYW + Sbjct: 377 --------PILMGASMVLQQKIMPTTMDPTQAKMMLLLPVFLTFLFLNFPAGLVIYWLTN 428 Query: 546 NVISIVQQAVIMKMH 560 NV++I QQ V + Sbjct: 429 NVLTIGQQVVTDRFF 443 >gi|109946792|ref|YP_664020.1| putative inner membrane protein translocase component YidC [Helicobacter acinonychis str. Sheeba] gi|109714013|emb|CAJ99021.1| inner-membrane protein [Helicobacter acinonychis str. Sheeba] Length = 546 Score = 298 bits (763), Expect = 2e-78, Method: Composition-based stats. Identities = 151/605 (24%), Positives = 257/605 (42%), Gaps = 92/605 (15%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYP----RIEEMNNERKNIQTVKQPNQ--VD 50 M++N N +AIALS + + + F+ P E E N T PN Sbjct: 1 MDKNNNTNLRLILAIALSFLFITLYSYFFQKPDKTTPKETAKQEAANNNTALNPNAPTTQ 60 Query: 51 NSYAAVLIDDRAQALSMS---PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 NS AA I + ++S ++E+ + + + L+ Sbjct: 61 NSSAAQAIPQESLLSTISFEHAKIEIDSL----------GRIKQVYLKNKKYLTPKEKGF 110 Query: 108 VT----LLSPSNTKNAYFAELDYVS-------------TANNIELPNSNTVWNLISGKIL 150 + L S EL + T NN S + S L Sbjct: 111 LEHVSHLFSSKENTQPLLKELPLLGDNLKPLEVRFLDPTLNNKAFNTSYS----ASKTTL 166 Query: 151 TPTTPIKLVFKNANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208 P + L + + +T++ + HY +I NN I ++P Sbjct: 167 GPNEQLILTQDLGD-LTIIKTLTFYDDLHYDLQIAFKSPNNIIPN-----YVITNGYRPV 220 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 +++ G + DK + + + D ++ + +L D+Y+ ++ Sbjct: 221 ADLDSY-TFSGVLLENNDKKIEKIEDKDAKE---IKRFSNIRFLSSVDRYFTTLLFTDNP 276 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 F + S+ + F + T + G K++ ++ P Sbjct: 277 QGFEALID--SETGTKNPLGFIS--------LKNEATLHGYIGPKDYRSLKAIS-----P 321 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS Sbjct: 322 MLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIVVRIILYPLSYKGMVSMQK 381 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 382 LKELAPKMKELQEKYKG-EPQKLQANMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLY 440 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 ++E++ + + WI DL+ DP I LF M SM+ ++ Sbjct: 441 NAVELKSSEWILWIHDLSIMDPYFILPLF-------------------MGASMYWHQSVT 481 Query: 509 PPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P D QA I ++P++F L +FPAGL++YW +NV+S++QQ +I K+ + + Sbjct: 482 PNTMTDPMQAKIFKFLPLLFTLFLITFPAGLVLYWITNNVLSVLQQLIINKVLENKKHMH 541 Query: 568 DRLRS 572 ++ + Sbjct: 542 EQTKK 546 >gi|15612408|ref|NP_224061.1| putative inner membrane protein translocase component YidC [Helicobacter pylori J99] gi|38503266|sp|Q9ZJG8|OXAA_HELPJ RecName: Full=Inner membrane protein oxaA gi|4155955|gb|AAD06920.1| putative Inner membrane protein [Helicobacter pylori J99] Length = 549 Score = 297 bits (761), Expect = 3e-78, Method: Composition-based stats. Identities = 139/580 (23%), Positives = 246/580 (42%), Gaps = 70/580 (12%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK---NIQTVKQPNQVDNSYAAVLIDDR 61 +AIALS + + + F+ P ++ N T P + + Sbjct: 9 LRLILAIALSFLFIALYSYFFQEPNKTTTETTKQETTNNHTATSPTASNTITQDFSVTQT 68 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSPSNTK 117 S+ + ++ + I+ G + + L+ + L S Sbjct: 69 IPQESLLSTISFEHAKIE--IDSLG-RIKQVYLKDKKYLTPKEKGFLEHVSHLFSSKENS 125 Query: 118 NAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 EL ++ L NT ++ S L P + L ++ + Sbjct: 126 QPSLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLT-QDLGTL 183 Query: 167 LFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 +T++ + HY KI NN ++P +++ G + Sbjct: 184 SIIKTLTFYDDLHYDLKIAFKSPNN-----LIPSYVITNGYRPVADLDSY-TFSGVLLEN 237 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 DK + + + D ++ I F + +L D+Y+ ++ F + S+ + Sbjct: 238 TDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEALID--SEIGTK 292 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 F + + G K++ ++ P +I++G F AK Sbjct: 293 NPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAK 339 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS +K + PK+ EL+EK+K Sbjct: 340 GVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYK 399 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI D Sbjct: 400 G-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWVLWIHD 458 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWM 523 L+ DP I P++M SM+ ++P D QA I + Sbjct: 459 LSIMDPYFIL-------------------PLLMGASMYWHQSVTPNTMTDPMQAKIFKLL 499 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P++F L +FPAGL++YW+ N++S++QQ +I K+ + Sbjct: 500 PLLFTIFLITFPAGLVLYWTTHNILSVLQQLIINKVLENK 539 >gi|189501466|ref|YP_001960936.1| 60 kDa inner membrane insertion protein [Chlorobium phaeobacteroides BS1] gi|254772768|sp|B3EQF7|OXAA_CHLPB RecName: Full=Inner membrane protein oxaA gi|189496907|gb|ACE05455.1| 60 kDa inner membrane insertion protein [Chlorobium phaeobacteroides BS1] Length = 587 Score = 295 bits (756), Expect = 1e-77, Method: Composition-based stats. Identities = 127/594 (21%), Positives = 239/594 (40%), Gaps = 62/594 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY---PRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ N + + L +I+ W F P E M + ++ + + AV Sbjct: 1 MD--KNSVIGLVLIGLIMIVWMQFMAPENKPVPERMTADVTGVEETSAKSGTGSPAVAVS 58 Query: 58 IDDR------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + + N ++ +GA + L+ + +++N L+ Sbjct: 59 AVPETFGEFSAATEGEEKLLTIDNELFTAVLSSRGATLKSMVLKKH---LNANRERFDLI 115 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVF--KNANNI 166 S++ A + T++ + + + + LT + + A Sbjct: 116 KNSDSG----ALSLFFQTSDGKNIDTRDLYFEPSDTQKTVSLTGEESYTVTYRLDVAPEK 171 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM---------RHKPQTATNTFGVQ 217 + ++ I V D + ++ ++ N++ Sbjct: 172 SITIVYTFTGD-VYGINYDVQFTGFDGVLPGNEYQLEWDGGLLYSEKNIDDELQNSW--- 227 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 + SL++ SD K W+ + KY+ + IPS T Sbjct: 228 ---ASAYMGGSLLKLDASDPSKEYREEQSGVAGWIAVRSKYFVASLIPSSPTDGVYLKGS 284 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 G + K+ + + LF G ++ +H +L E ++D+G Sbjct: 285 GKPGEKFEDYTAALKFTLPQNEKTHSESLVLFVGPVDYNVLHSLNVNL-----EKIMDFG 339 Query: 338 WFY-------FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 W + +I P+F L+S L N+G+ I++ + +KL+ +PL S M Sbjct: 340 WDWLTRPFAEYIILPIFDLLS---KLTSNYGLIIIIFALLIKLVTYPLTMASTKSMKKMA 396 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QP + EL+EK+K +P Q +Q + ++YK +NPL GC P+LLQ+P+ FA++ V S Sbjct: 397 ALQPMMKELQEKYKDNP-QKMQSELGRIYKEAGVNPLGGCLPVLLQMPLLFAMFYVFRSS 455 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+R + W KDL+ D +I L +P Y H+ ++PI+M ++++Q K++P Sbjct: 456 IELRQQS-FLWAKDLSLPD--SILDLGFSIPLYGD---HIALFPILMGGAVYLQQKITPT 509 Query: 511 PADKGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q +L PV+ + ++ PAGL +Y+ NV SI Q I K A+ Sbjct: 510 AQSNDQMKAMLYIFPVMMLLFFNNLPAGLGLYYLMFNVFSIAQTFYINKTSSAD 563 >gi|21672847|ref|NP_660912.1| Oxa1/60 kDa IMP family protein [Chlorobium tepidum TLS] gi|38503043|sp|Q8KGG2|OXAA_CHLTE RecName: Full=Inner membrane protein oxaA gi|21645895|gb|AAM71254.1| oxa1/60kDa IMP family protein [Chlorobium tepidum TLS] Length = 590 Score = 295 bits (755), Expect = 1e-77, Method: Composition-based stats. Identities = 121/584 (20%), Positives = 234/584 (40%), Gaps = 53/584 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRI----EEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N + AL I+ W F + P E+ R+ +Q S A Sbjct: 1 MD--RNSVIGFALIAAIMIVWLQF-MKPEQKLGLEKAAASREAVQKTPAAALPAPSAAVA 57 Query: 57 LIDD-------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 ++ + + N +++ KGA L L+ + + N Sbjct: 58 AAARADSLGSFAQASVGTEKTITVSNDLFTATLSSKGATLKSLVLKKH---LDGNRKPFN 114 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNAN 164 L+S S+ A +++ ++ + + + K + V Sbjct: 115 LISASDKG----ALSMLFLSSDGKKIDTRDLYFRSLDAKTTETVTGKEKLSVSYVLDVDA 170 Query: 165 NILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPR-----GRIMRHKPQTATNTFGVQE 218 + T + + Y+ + N I + G + + + Sbjct: 171 TRSIQITYTFTGDSYVVDYDLKL-NGFGSSIAGNEYQLDWDGGLNYSEKDQVDES---HN 226 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + S+V+ D +K+ W+ + +KY+ + +P + T Sbjct: 227 AIASAYLGGSVVKLDAKDAKKTWQDEESGKAQWVAVRNKYFVAAIMPQRTTDGIYLHGTK 286 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 DG + +S+ L+ G ++ T+ DL E ++D+GW Sbjct: 287 KDGSDFKNYVAALKMSFPAGQQSVDDHYRLYVGPLDYNTVKSLNADL-----EKIMDFGW 341 Query: 339 FY----FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 + F + + ++ V N+G+ I++ +KL+ +PL+ S M +QP Sbjct: 342 DWLTRPFAEYLILPIFNWMNKYVTNYGLIIIIFAFLIKLVTWPLSLASTKSMKKMSALQP 401 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 + EL+EK+K +P + LQ + ++YK +NPL GC P ++Q+P+ FA++ V S+++R Sbjct: 402 VMKELQEKYKDNPAK-LQSELGRIYKEAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQLR 460 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + W+KDL+ D F LP Y H+ I PI+M++++F Q K++P Sbjct: 461 QHG-FLWVKDLSVPDSVYHFAF--KLPLYGD---HIAIMPILMAVTVFFQQKITPNAQSN 514 Query: 515 GQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q I+ W+ P + +F ++ PAGL +Y+ N+ S+ QQA + Sbjct: 515 EQTKIMMWLFPAMMLFFFNNMPAGLALYYLMFNIFSVAQQAYMN 558 >gi|149919109|ref|ZP_01907593.1| 60 kDa inner membrane insertion protein [Plesiocystis pacifica SIR-1] gi|149820039|gb|EDM79460.1| 60 kDa inner membrane insertion protein [Plesiocystis pacifica SIR-1] Length = 580 Score = 294 bits (754), Expect = 2e-77, Method: Composition-based stats. Identities = 132/601 (21%), Positives = 237/601 (39%), Gaps = 71/601 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN---------------------NERKN 39 ME +A+ALS++I++ + P + ++ Sbjct: 1 MEMKHRIALAMALSILILFGYTYLVPSPEPTDDALAEQEGGSETGGETGDETGGSDDGAG 60 Query: 40 IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLK-GAQFDDLNLRG-- 96 +P Q A Q R+ N L +++ + G + + L Sbjct: 61 APEAGEPAQPGQPVEASPAVPDTQIEKSEHRIA--NELLAVTVDSEPGGLINHIELLDDQ 118 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 + ++ L + + E +++ + + +G + Sbjct: 119 FRNRETNEGEDFLLFDEAAGSDKTL-EFGFLADETDFGWGRGARAQLVEAGD-----DRV 172 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 + V + + + T++L + Y K V N + + R ++++ + V Sbjct: 173 RYVRRKGD-VEVVETLTLLDGYEAKYEVLVRNFGKESVAHRVE-LTTRMGLGSSSSRYDV 230 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275 SL E + D+E + W G+ KY+ IPS+ +F Sbjct: 231 HRALCRAT--DSLEEFTFDDVEDEEDVEKVKGGLHWFGVDSKYFLQAVIPSE--TFSGCV 286 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE---- 331 + +IT+ PG+ + L+ GAK + + + + E Sbjct: 287 VDSDGAGSGMVNTAIGRQITLEPGQQKSYEFGLYLGAKIDSMLGAFPESEGLEAAEGIAL 346 Query: 332 -MLIDWGWFY----FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 IDWGWF ++ M L+ YFY L G +G+AI++ TV +KL PL KQY S Sbjct: 347 TDAIDWGWFGALSEYLGGMMLALLRYFYGLTGVWGVAIIMLTVVIKLTLLPLTIKQYRSM 406 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 MK I P++ LREK+K + + + M L+ H +PL+GC P+LLQ P++ A+Y + Sbjct: 407 RKMKEINPEMQALREKYKDDQVK-MNQEMQALFSRHGTSPLSGCTPMLLQFPIWIALYAM 465 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + +++ H + W+ DL DP I PI M MF+Q Sbjct: 466 LGAVVDLYHES-FLWLPDLTQPDPYYIL-------------------PIGMGALMFLQTS 505 Query: 507 MSPPP-ADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M+P P D+ QA ++ W MP VFV + P+GL +Y + +S++Q + +K+ + Sbjct: 506 MNPNPGGDEMQAKMMKWMMPGVFVVMMLFLPSGLGVYIFANITLSLIQSFIQLKIPSKDK 565 Query: 565 G 565 Sbjct: 566 D 566 >gi|99034074|ref|ZP_01314196.1| hypothetical protein Wendoof_01001014 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 341 Score = 294 bits (753), Expect = 3e-77, Method: Composition-based stats. Identities = 139/345 (40%), Positives = 213/345 (61%), Gaps = 9/345 (2%) Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSF 271 + EG + D L E Y DI K + S +W G +DKYW + IP K Sbjct: 1 YWISHEGVLGAF-DNKLEEWTYKDISKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKI 59 Query: 272 HSQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + K+ + + ++Q F +ILPG S++ N+ FAGAK+ + Y+ L IP F Sbjct: 60 NVSIKHTNVNNTDKFQVDFVKPYKSILPGASVSNVNYFFAGAKKLNLLDSYKDTLNIPLF 119 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + +D+G YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL L + Y+S +K Sbjct: 120 DKAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLSLFNRSYISMFKVK 179 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++QP++ ++E +K + K I L+K +N+NP++ +P+L+QIPVFFA+YKV+ ++ Sbjct: 180 SLQPELTRIKELYKNDSLK-QHKETIALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVT 238 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-- 508 +EMRHAPF+ WIKDL+A DPTNIFTLFG+ + P + +GI PII +M IQ K+S Sbjct: 239 IEMRHAPFFLWIKDLSAPDPTNIFTLFGLFNYNFP--ISIGILPIIFGATMIIQQKLSEK 296 Query: 509 -PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 D Q ++ ++P + VF SSFPAGL+IYW +SN+I+++Q Sbjct: 297 DQTSKDDIQVNVMKFLPYISVFIFSSFPAGLVIYWIFSNIITLIQ 341 >gi|78189983|ref|YP_380321.1| Oxa1/60 kDa IMP family protein [Chlorobium chlorochromatii CaD3] gi|123579125|sp|Q3ANZ7|OXAA_CHLCH RecName: Full=Inner membrane protein oxaA gi|78172182|gb|ABB29278.1| protein translocase subunit yidC [Chlorobium chlorochromatii CaD3] Length = 584 Score = 294 bits (752), Expect = 3e-77, Method: Composition-based stats. Identities = 115/578 (19%), Positives = 227/578 (39%), Gaps = 34/578 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N +AL +I+ W F + + + + + A D Sbjct: 1 MD--KNSVTGLALIAVIMLVWLQFMTPAQKVQPPQQVATTEQQVASASLPLPAALSPSTD 58 Query: 61 R----AQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 A A S +V + +N +++ KGA L L+ + P L N Sbjct: 59 TFGLFATASQGSEQVTVVENDLFRATLSSKGATLKSLVLKKHLD--GHLQPFDLLGKQKN 116 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + + +L N ++ A E Sbjct: 117 GHLSLLFLTKDGKRIDTRDLYFRNVTLETKRTISGQERYTVRYRLDVAPQKAIEIAYLFS 176 Query: 176 -EHYLFKIVDTVT----NNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 E Y + + + ++ + G + + + Q SLV Sbjct: 177 GESYAIDYDVKLIGFGNDIAGNEYQVQWDGGLAYTEKNREEES---QNALAGAYLGGSLV 233 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + ++ +W+G+ +KY+ + IP +++ G+ + Sbjct: 234 KLDAAKEKEVFREEQSGEATWVGVRNKYFTAALIPQSKSNGIYLEGKREAGNHFENYLAA 293 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPM 346 + T ++ G ++ T+ E ++D+GW + F + Sbjct: 294 LKMSLPASATEVHNTFTMYVGPLDYNTVKAQG-----VGLEKIMDFGWDWLTRPFAEWMI 348 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 + ++ + N+GI I++ VKL+ +PL+ S M +QP + EL+ K+K + Sbjct: 349 LPVFNWLNGFISNYGIIIIIFAFLVKLVTYPLSMASTKSMKKMAALQPVLQELQVKYKDN 408 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 P + +Q + ++Y+ +NP+ GC P LLQ+P+ FA++ V S+++R + W KDL+ Sbjct: 409 PAK-MQSELSRIYREAGVNPVGGCLPTLLQMPLLFAMFYVFRSSIQLRQHG-FLWAKDLS 466 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PV 525 D +IF +P Y H+ +PI+M+ ++++Q K++P Q I+ + PV Sbjct: 467 VPD--SIFDFGFAIPLYGD---HIAFFPILMAGTVYLQQKITPTAQPNEQMKIMLVLFPV 521 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + +F ++ PAGL +Y+ N+ S+ QQ I K A+ Sbjct: 522 MMLFFFNNMPAGLGLYYLMFNIFSVAQQFYINKTTTAD 559 >gi|187735748|ref|YP_001877860.1| 60 kDa inner membrane insertion protein [Akkermansia muciniphila ATCC BAA-835] gi|187425800|gb|ACD05079.1| 60 kDa inner membrane insertion protein [Akkermansia muciniphila ATCC BAA-835] Length = 628 Score = 294 bits (752), Expect = 3e-77, Method: Composition-based stats. Identities = 130/574 (22%), Positives = 251/574 (43%), Gaps = 59/574 (10%) Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIG--------SINLKGAQFDDLNLRGY 97 P ++ ++ + +P + + G + N G + L + Sbjct: 52 PGAGTSAPEQASVNKALEEDKTAPITLVATQEVNGRQEPFITYTFNRIGGSIGTVTL--H 109 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 + V S ++ + + EL + + NTV+ + + Sbjct: 110 NDIVDSQKVADHNITINEAQQRGIGEL-VFNMDATQDPSYDNTVYK----EAKRTADSVT 164 Query: 158 LV-FKNANNILFERTISLD------------EHYLFKIVDTVTNNSIDQIRFSPRGRIMR 204 L + A + +T +L YL ++ ++ N S + G Sbjct: 165 LEGYDPARQLFISKTYTLHPVKNLEGEVLPGSKYLIRLTVSLLNKSPNVQDLRYMGIFGG 224 Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQK--------YSDIEKSSISNFHESNSWLGISD 256 A + D SL ++ +S + + + ++ G+ Sbjct: 225 SAYPIAKSEPKDTYTHFFYHADGSLEQEVPSYFTGGFFSSAKARVLEGPLQDLTYAGVMS 284 Query: 257 KYWASVFIPSKET------SFHSQFKYLSDGHARYQ---AKFSANEITILPGKSITTTNF 307 +Y+A++ +P ++ + +F +G+ +T+ P + T T Sbjct: 285 QYYATILLPQDQSRGSTVYATRQEFPLTHEGNTLVPGVTVAMGIPNLTMAPNEIKTLTYD 344 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 ++ G K + +L+ P ++ +GW F++ PM L++ F+ GN+G+AI+ Sbjct: 345 IYTGPKFNAYLRDL--NLSYPAISDIMAYGWLVFLSVPMNWLLNLFHGWFGNWGVAIICM 402 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 T+ V+ L +PL KK Y++ M +QP++ +L+EK+ P Q + M++LY+ + INP Sbjct: 403 TIVVRALIWPLHKKSYMAMKRMSLVQPEMVKLKEKYPDDP-QKVNMEMMKLYQKYGINPA 461 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 +GC P+L+QIP+FFA Y+V+ S E+R PF W+ DL+ D + LFG+ Sbjct: 462 SGCVPMLIQIPIFFAFYRVLQYSAELRGQPFCLWMTDLSLPD--TVGHLFGV-------- 511 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + I P+IM+++M IQM+M+P ++ Q +I+N MPV+F +F + L +YW+ N+ Sbjct: 512 -PINILPLIMAVTMIIQMRMTPQAGERSQRIIMNLMPVMFFLFCYNFASALALYWTTQNL 570 Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 ISI Q A+I ++ + + +S F + Q Sbjct: 571 ISIGQTALIRRLPMPVLSPAKKKKSGFFQKMMEQ 604 >gi|257461375|ref|ZP_05626471.1| inner membrane protein, 60 kDa [Campylobacter gracilis RM3268] gi|257441098|gb|EEV16245.1| inner membrane protein, 60 kDa [Campylobacter gracilis RM3268] Length = 547 Score = 294 bits (752), Expect = 3e-77, Method: Composition-based stats. Identities = 131/580 (22%), Positives = 240/580 (41%), Gaps = 78/580 (13%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYV------YPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 ++ +AIA ++I A+ +FY+ + P +A Sbjct: 7 QSKRLAIAIATALIFFVAYDHFYLSKIRAAMEANATAAQIAQKNTAKSAPQTSAAGVSAQ 66 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + +P V + +I+ G + L + N + L+ P + Sbjct: 67 GANLNTANSISAPLVRVVGKEANFTIDGLG-RISSYALNDAKF-RNENGDAINLIDPKSH 124 Query: 117 KNAYFAEL-DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 D A + P S + L + + L ++ + + ++ Sbjct: 125 SKPLEMRFEDAALNAMAFDTPYSASSNEL---DVRNGEASVTLS-QSLGAVSINKILTFY 180 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE---- 231 + +K+ + N + +P +++ V + G+ + + Sbjct: 181 PNGSYKLDLKLGGN-------ARYFISPGSRPNVEVDSYTVHGVIVGKPGEAGISDKIAS 233 Query: 232 ------------QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + + D + +N SD+Y+ ++F + + +S Sbjct: 234 FFTGSQAISESVEIFKDGDVDKNERISGAN-IAASSDRYYTTLFYGESLNATVTDADKIS 292 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 + G + + GAK+ T+ P +I++GWF Sbjct: 293 Q---------------VFIGSDGDLSLTGYIGAKDHATLSSIN-----PALTHIIEYGWF 332 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 FIA+PMF +++ + +GN+G +I++ T+ ++L+ FPL+ K +S +K++ PK+ EL Sbjct: 333 TFIARPMFKFLNWLHGYIGNWGWSIVVLTLIIRLILFPLSYKGMLSMNKLKDLAPKMKEL 392 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +EK+K Q LQ M+ LYK + NP+ GC PILLQIPVFFAIY+V+ ++E++ A + Sbjct: 393 QEKYKDDK-QKLQMHMMDLYKKNGANPMGGCLPILLQIPVFFAIYRVLLNAIELKGAEWA 451 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAM 518 WI DL+ DP I PI M + MF+Q K++P D Q Sbjct: 452 LWIHDLSLKDPYYIL-------------------PITMGILMFLQQKITPTTFTDPMQEK 492 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ ++P++F FPAGL +YW+ +N SI+QQ VI K Sbjct: 493 MMKFLPLIFTVFFVMFPAGLTLYWTVNNFCSIIQQYVINK 532 >gi|83816022|ref|YP_444208.1| inner membrane protein oxaA [Salinibacter ruber DSM 13855] gi|83757416|gb|ABC45529.1| inner membrane protein oxaA [Salinibacter ruber DSM 13855] Length = 665 Score = 293 bits (749), Expect = 8e-77, Method: Composition-based stats. Identities = 118/639 (18%), Positives = 241/639 (37%), Gaps = 97/639 (15%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY---------------------PRIEEMNNERKNI 40 E N +A L +I++AW ++ P + + Sbjct: 23 EDQRNVIIATILVAVIMFAWIFWFSPSPQQQQSQQAAGPADTTEQTDPSAPAADTGADDA 82 Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSP-------------RVELKNPSLIGSINLKGA 87 + P ++ A + Q + +P R+ +++ ++ KG Sbjct: 83 PSDAAPPSTADAGADASQPEADQPEAPAPDSVTAAALEGTQRRIVVESDLYTVVLSTKGG 142 Query: 88 QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147 + L+ Y + P+ + T + T ++ + + + Sbjct: 143 TIERFTLKEYKQ-FNQEDPVQIV---DTTAGGTLSLSFTTPTRRRVDTRSLYFSADTEAD 198 Query: 148 KILTPTTPIKLVFKN--ANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMR 204 + L F+ + ++ + + Y + PR + Sbjct: 199 TVRIEDESKTLTFEAQLGDG-ALRQSYTFHPDDYDLGLAIEQE---------RPRSFLTS 248 Query: 205 HKPQ-TATNTFGVQEGF---------IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGI 254 + T EG + + + SD + SW+ + Sbjct: 249 DGYELTWHGGMPYSEGGEEDELRYTGLFARNGEQIQSLTLSD-ADQNQKRIEGDVSWMAV 307 Query: 255 SDKYWASVFIPSKE-TSFHSQFKYLSDGHARYQAKF---SANEITILPGKSITTT-NFLF 309 +KY+ + +P + T+ + +G A +A F + LP ++ L+ Sbjct: 308 KNKYFTAAVMPDRPATALGASLTGRKEGRATSEAAFKDLTGRLQMPLPRETTHVDKFHLY 367 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF----------IAKPMFMLM-----SYFY 354 AG ++ ++ Y ++L ++++GW +F + PM + S+ + Sbjct: 368 AGPIDYYSLADYGRNLYG-----MVNYGWDWFEWMTKPLAEYLYIPMLTYLGGGLPSWLF 422 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +G+ ++L V +K + +PL K Y S A M+ +QPK+ E+++K+ P+ Q+ Sbjct: 423 GGGLPYGVIVILMAVLIKTVVYPLTKSSYRSMAQMRELQPKMQEIKDKY-DDEPEKQQEE 481 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M+QLY+ +NPL GC P+ LQ P+ ++Y+ I S+++R + W DL+A D I Sbjct: 482 MMQLYRETGVNPLGGCLPMFLQYPILISLYQFIPKSIQLRQES-FLWAADLSAPD--KIL 538 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFAL 531 L +PFY +V + ++M L+M + M++ A + + MP V F Sbjct: 539 QLPFEIPFYGD---YVAGFTLLMGLAMIVTMRVQSTGGGAAGGQAKIFMYAMPGVIFFIF 595 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + F +GL +Y+ + N+++ QQ I E L Sbjct: 596 NRFASGLSLYYLFYNIVTAAQQKWINMQLEKEKDDDGNL 634 >gi|237750081|ref|ZP_04580561.1| inner-membrane protein [Helicobacter bilis ATCC 43879] gi|229374268|gb|EEO24659.1| inner-membrane protein [Helicobacter bilis ATCC 43879] Length = 577 Score = 291 bits (745), Expect = 2e-76, Method: Composition-based stats. Identities = 137/602 (22%), Positives = 255/602 (42%), Gaps = 89/602 (14%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQ-----PNQVDNSYA 54 + N +A+A+S ++ W F+ P E + +VK P N+ A Sbjct: 4 QSNLRLILAVAISFAVIVIWSKFFAPEPPVKEPQAANQVTDSSVKSENEVIPQSAINTNA 63 Query: 55 AVLIDDRAQALSMSPR-------------VELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 ++ + S + + V +++ I++ GA + L+ Sbjct: 64 NIIAPPSSTNASNTMKGIPTSVPQIKENLVRIESQDFDMDIDVSGA-ITQVYLKADKYTQ 122 Query: 102 ------------------SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWN 143 N + L P N L + T N +S ++ Sbjct: 123 PHQEGIFTHIGRLFGMVSGENKKLDRL--PLLADNVPLYPLQMIFTDENYRKKSSQIKYS 180 Query: 144 LISGKILTPTTPIKLVFKNANN-ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRI 202 I+ L ++ ++ I+++ + +K+ ++ + Sbjct: 181 TDRSHIVLTDKAETLTLTQDLGDLVVKKIITIEPNMTYKVQIELSKQT-------QYLIS 233 Query: 203 MRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASV 262 +P + ++ G + + S+ + + D K+ NF ++ ++ D+Y+ S+ Sbjct: 234 NGMRPNADSESYVFH-GVVLQKNNGSIEKIEDGD-AKNEGENFDDAL-YVASVDRYYTSL 290 Query: 263 FIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 F A + S + G K++ + Sbjct: 291 L-----------FNIDKPLSLSIGAFSKGLPTPFINVSSANEVLHGYIGPKDYRVLESIN 339 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 P ++++G F AK +F L+ + Y +GN+G+AI++ T+ ++++ FPL+ K Sbjct: 340 -----PHLTSVVEYGRITFFAKYIFALLDFLYQYIGNWGVAIIVLTIIIRIILFPLSFKG 394 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 V +K + PK+ +L+ K+K P Q LQ +M++LYK H NPL GC P++LQIPVFFA Sbjct: 395 MVGMQKLKELAPKMKDLQAKYKGDP-QKLQASMMELYKKHGANPLGGCLPLVLQIPVFFA 453 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 IY+V+ ++E+++AP WI DL+ DP + P++M SM+ Sbjct: 454 IYRVLYNAVELKNAPLMWWIHDLSVMDPYFVL-------------------PLLMGFSMY 494 Query: 503 IQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +Q ++P D Q + W+PV+F F L +FPAGLI+YW+ +N+ISI+QQ I KM Sbjct: 495 LQQALTPTTFTDPMQEKVFKWLPVIFTFFLITFPAGLILYWTINNLISIIQQLAINKMLE 554 Query: 562 AE 563 ++ Sbjct: 555 SK 556 >gi|94967248|ref|YP_589296.1| protein translocase subunit yidC [Candidatus Koribacter versatilis Ellin345] gi|94549298|gb|ABF39222.1| protein translocase subunit yidC [Candidatus Koribacter versatilis Ellin345] Length = 583 Score = 291 bits (745), Expect = 2e-76, Method: Composition-based stats. Identities = 120/607 (19%), Positives = 243/607 (40%), Gaps = 68/607 (11%) Query: 5 WNYFVAIALSVI-IVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 + AL+ I IV F+ ++ + +K+ Q +Q S AV A+ Sbjct: 15 RKLLLIFALTFIMIVIGQTVFFKNIPKKQDDKNQKSAPVAAQTSQPAASAPAVATPAVAK 74 Query: 64 ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE 123 ++N +GAQ L+ Y +P+ + + + Y Sbjct: 75 QAQAETETVVENAVSRIVFTNRGAQVKSWVLKNYKD--DHGNPLELVNREAAKQFGY--P 130 Query: 124 LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIV 183 L + + + ++ ++ + + + F + + + ++T+ Y+ + Sbjct: 131 LSFFTYDQGLTTKLNDAMYVASATGRIEVPGELTFEFSDGD-LSAKKTLRFTNGYVVGVE 189 Query: 184 DTVT----NNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 +VT N + S G ++ +Q IA + Q I Sbjct: 190 TSVTRGGSNVTALPAWPSGFG------DDVQPTSYALQ--AIAYENSGEVERQTGKKI-- 239 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS----------DGHARYQAKF 289 + +W G D+Y+A++F+P + + + D + Sbjct: 240 VGGATLRGPFNWAGAQDQYFAALFLPDNPPAASMVTLHNTLKIPADLDKPDPNKTQPVDV 299 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI-----PRFEMLIDWG-WFYFIA 343 + + L G ++T LF G K + + + A P ++D+G + FIA Sbjct: 300 IGSAVGDLSGPTVT---RLFVGPKALHILESVKSNAAPGQPNGPDLSKVVDFGKYLGFIA 356 Query: 344 KPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F+ + + ++ V N+G +I++ TV + L+ PL S M+ IQP++ ++EK Sbjct: 357 KPLFLWLRWTHDHWVPNWGWSIIILTVIINLVLLPLRLSSMKSALKMQKIQPQMKAIQEK 416 Query: 403 FK----QSPPQV-LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +K P + + M LYK H++NP+ GC P+++Q+P A Y ++++++E+R A Sbjct: 417 YKKYKMNDPKRADMNTEMAALYKQHSVNPVGGCLPLVIQMPFLIAFYGMLAVAIELRQAN 476 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQ 516 ++ W+ DL+ D I P+++ S + +M+P D Q Sbjct: 477 WF-WLHDLSGPDHLYII-------------------PVLIVASTILMQRMTPQAGIDPAQ 516 Query: 517 AMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM-HGAEIGLIDRLRSTF 574 ++ MP + + +GL +YW N+I QQ ++ K G EI + ++ Sbjct: 517 QKMMTIMMPAFLGWISLRYASGLGLYWIVGNIIGFAQQFIMNKTELGREIAAVRAKQANK 576 Query: 575 SKNYNSQ 581 + + Sbjct: 577 RRLKGKE 583 >gi|237756916|ref|ZP_04585388.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237690917|gb|EEP60053.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 515 Score = 290 bits (743), Expect = 3e-76, Method: Composition-based stats. Identities = 128/575 (22%), Positives = 252/575 (43%), Gaps = 73/575 (12%) Query: 1 MERN---WNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQP-NQVDNS 52 ME+ + A + +++ ++ Q F+ E N ++ + P QV S Sbjct: 1 MEQQDMQKRLMIFFAAAALLLISFSLVSQYFFKDNAQNEKNQTQQTEKEAAAPIKQVGGS 60 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 Y VL +R A S+ V +K + G + Y++D+ Sbjct: 61 YDLVLSGERVNADSLKDIVRIKTKEGYVEFSNIGGRIVSAFDNRYNIDI----------V 110 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 P +K+ + ++T NI + N + I KN N + E+T Sbjct: 111 PEFSKSNKIFPGEIITTDTNI-----TKLLNFSKYESKIKDNKISFYLKNEN-VEVEKTY 164 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 ++++ + + ++ + S + ++ + +G I D+ ++ Sbjct: 165 TINDDNTITVD--IKTKGLENVGLS---YLTGVTLKSEGDFG--HDGPIIKT-DREIIRI 216 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 D + ++I + W G +KY+ + + Y + + Sbjct: 217 ---DNDINTIQTIRDKILWAGQENKYFMQIL------------SVKGGINTVYIVPVAKD 261 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA-----IPRFEMLIDWGWFYFIAKPMF 347 +L + F + G K + + ID+G+F + KP+F Sbjct: 262 TTVVLSEIPASFEGFNYLGPKLYSLLGEITDKYQKLWNVDLDLRSSIDFGFFGILGKPLF 321 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +L+ + Y+ V N+G+AI++ TV ++++ FPL K + M ++ P++++L++K+ + P Sbjct: 322 LLLHFIYDFVHNWGLAIIVLTVLLRIVLFPLNHKSLKAMKKMADLAPEMEKLKKKYAKDP 381 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q L++ +++LY NP++GC PIL QIP+F A+Y V+ +++E+++APF WIKDL+ Sbjct: 382 -QKLREEIMKLYAEAGANPMSGCLPILAQIPIFIALYNVLMVTVELKNAPFMLWIKDLSD 440 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP + PI+M LSM +Q ++P +DK Q MI+ + VF Sbjct: 441 KDPYYVL-------------------PILMGLSMVVQQFITPI-SDKNQRMIMYILAGVF 480 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +FP+GL++YW +N++ ++Q ++ K Sbjct: 481 TFMFMNFPSGLVLYWLTNNILGLIQSVIVNKSMKK 515 >gi|110598560|ref|ZP_01386828.1| 60 kDa inner membrane insertion protein [Chlorobium ferrooxidans DSM 13031] gi|110339794|gb|EAT58301.1| 60 kDa inner membrane insertion protein [Chlorobium ferrooxidans DSM 13031] Length = 583 Score = 290 bits (742), Expect = 4e-76, Method: Composition-based stats. Identities = 117/583 (20%), Positives = 240/583 (41%), Gaps = 47/583 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+R +A+ +I++ W F + P + + + P + + AA D Sbjct: 1 MDRKSLTGLALI--GLIMFVWLQF-MSPEKKLLKSPEAVKTEQASPQALSSPVAAAPSAD 57 Query: 61 -----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 A V++ N +++ KGA L L+ + P + + N Sbjct: 58 TFGVFATAAGGREQLVKVDNDLFRATLSSKGATLKSLVLKKHLN--GERKPFDLVSNTRN 115 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + + +L S + + + ++ A + T Sbjct: 116 GALSLLFLTREGKKIDTRDLYFSTVTLDSVRAISGKQSYAVRYHLDIAPAQAIDITYLFS 175 Query: 176 -EHYLFKIVDTVTNNS-IDQIRFSPR--------GRIMRHKPQTATNTFGVQEGFIAVLG 225 + Y K+ V ++ + G + + + + Sbjct: 176 GDSY--KVGYDVKLTGFASELAGNEYQLQWDGGLGYSEKDRKDESQSV------LAGAYL 227 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 SLV+ + ++ W+ + +KY+ + IPS+ T + G+ + Sbjct: 228 GGSLVKLDAAKENETYREEQSGEAKWVAVRNKYFVAALIPSRRTEGIHLDGKRTAGN-EF 286 Query: 286 QAKFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY---- 340 + +A ++ + +++ F L+ G ++ + L E ++D+GW + Sbjct: 287 ENYTAALKMGVPSTGTVSDDKFSLYLGPLDYNIVKSQHAGL-----EKIMDFGWDWLTRP 341 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F + + S+ V N+G+ I++ +KL+ +PL+ S M +QP + EL+ Sbjct: 342 FAEFIILPVFSWMNTFVSNYGLIIIIFAFLIKLVTYPLSMASTKSMKKMSALQPVLKELQ 401 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K +P + LQ + ++YK +NP+ GC P++LQ+P+ FA++ V S+E+R + Sbjct: 402 EKYKDNPAK-LQSELGRIYKEAGVNPIGGCLPVVLQMPLLFAMFYVFRSSIELRQHS-FL 459 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-I 519 W KDL+ D +I +P Y H+ ++PI+M++++F+Q K++P Q + Sbjct: 460 WAKDLSVPD--SILDFGFSIPMYG---NHIAVFPILMAVTVFMQQKITPTTQSNDQMKVM 514 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + P + + ++ PAGL +Y+ N+ S+ QQ I K A Sbjct: 515 MYMFPAMMLLFFNNMPAGLGLYYLMFNIFSVAQQFYINKTTTA 557 >gi|294505868|ref|YP_003569926.1| Inner membrane protein oxaA [Salinibacter ruber M8] gi|294342196|emb|CBH22974.1| Inner membrane protein oxaA [Salinibacter ruber M8] Length = 654 Score = 290 bits (742), Expect = 5e-76, Method: Composition-based stats. Identities = 118/639 (18%), Positives = 241/639 (37%), Gaps = 97/639 (15%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY---------------------PRIEEMNNERKNI 40 E N +A L +I++AW ++ P + + Sbjct: 12 EDQRNVIIATILVAVIMFAWIFWFSPSPQQQQSQQAAGPADTTEQTDPSAPAADTGADDA 71 Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSP-------------RVELKNPSLIGSINLKGA 87 + P ++ A D Q + +P R+ +++ ++ KG Sbjct: 72 PSDAAPPSTADAGADASQPDADQPEAPAPDSVTAAALQGTQRRIVVESDLYTVVLSTKGG 131 Query: 88 QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147 + L+ Y + P+ + T + + ++ + + + Sbjct: 132 TIERFTLKEYKQ-FNQEDPVQIV---DTTAGGTLSLSFTTPSRRRVDTRSLYFSADTKAD 187 Query: 148 KILTPTTPIKLVFKN--ANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMR 204 + L F+ + ++ + + Y + PR + Sbjct: 188 TVRIEDESKTLTFEAQLGDG-ALRQSYTFHPDDYDLGLAIEQE---------RPRSFLTS 237 Query: 205 HKPQ-TATNTFGVQEGF---------IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGI 254 + T EG + + + SD + SW+ + Sbjct: 238 DGYELTWHGGMPYSEGGEEDELRYTGLFARNGEQIQSLTLSD-ADQNQKRIEGDVSWMAV 296 Query: 255 SDKYWASVFIPSKE-TSFHSQFKYLSDGHARYQAKF---SANEITILPGKSITTT-NFLF 309 +KY+ + +P + T+ + +G A +A F + LP ++ L+ Sbjct: 297 KNKYFTAAVMPDRPATALGASLTGRKEGRATSEAAFKDLTGRLQMPLPRETTHVDKFHLY 356 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF----------IAKPMFMLM-----SYFY 354 AG ++ ++ Y ++L ++++GW +F + PM + S+ + Sbjct: 357 AGPIDYYSLADYGRNLYG-----MVNYGWDWFEWMTKPLAEYLYIPMLTYLGTGLPSWLF 411 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +G+ ++L V +K + +PL K Y S A M+ +QPK+ E+++K+ P+ Q+ Sbjct: 412 GGGLPYGVIVILMAVLIKTVVYPLTKSSYRSMAQMRELQPKMQEIKDKY-DDEPEKQQEE 470 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M+QLY+ +NPL GC P+ LQ P+ ++Y+ I S+++R + W DL+A D I Sbjct: 471 MMQLYRETGVNPLGGCLPMFLQYPILISLYQFIPKSIQLRQES-FLWAADLSAPD--KIL 527 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFAL 531 L +PFY +V + ++M L+M + M++ A + + MP V F Sbjct: 528 QLPFEIPFYGD---YVAGFTLLMGLAMIVTMRVQSTGGGAAGGQAKIFMYAMPGVIFFIF 584 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + F +GL +Y+ + N+++ QQ I E L Sbjct: 585 NRFASGLSLYYLFYNIVTAAQQKWINMQLEKEKDDDGNL 623 >gi|224372873|ref|YP_002607245.1| putative inner membrane protein translocase component YidC [Nautilia profundicola AmH] gi|223589049|gb|ACM92785.1| inner membrane protein OxaA [Nautilia profundicola AmH] Length = 513 Score = 290 bits (742), Expect = 5e-76, Method: Composition-based stats. Identities = 138/569 (24%), Positives = 250/569 (43%), Gaps = 61/569 (10%) Query: 1 MERN---WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME N +A +S A+ F + P+ + + + +T + N AA Sbjct: 1 MENNGQLRRILIATVISFAFFVAYDYFVLTPQQKAASQLVEQNKTTVKTVSNTN-NAADK 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 I +A +++ + + I+ G + L+ + N + L++ K Sbjct: 60 ISKKANNENVTTIATVSAKNFQIKIDSLG-RISSFKLKQTKFNT-ENGKHLELVNDKLPK 117 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 + V E P + + L + + + I+ Sbjct: 118 PLEIRFENKVLNKLAFEKPVKADKTEITLNDK---PQTLTLTQNLNDKEIVTKIITFYPD 174 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 + + +TN + ++P+ A + + G + D +L + D Sbjct: 175 GHYDVKVKLTN-------PAIYYITPGYRPKVAVDKLTIH-GLVVKKSDGTLSIIEDGDA 226 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 +I N + + D+Y+ ++ K + D A A++ Sbjct: 227 VNETIDNAIITAGF----DRYYTTLLFSKKP----YSVIVVPDNEENPVAFIKADDNREF 278 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G + G K T+ +K+L ++ +G F AK +F L+ +FY LV Sbjct: 279 IG---------YIGPKFVDTLAAIDKELV-----DVVQYGVGTFFAKNLFFLLDWFYKLV 324 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G+AI+L V V+L+ FPL K VS +K + PK+ E+++K+K+ P Q LQ M++ Sbjct: 325 GNWGVAIILLVVLVRLVLFPLTYKGMVSMYKLKELAPKMKEIQQKYKKDP-QKLQMHMMK 383 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK H NPL GC P++LQIPVF+ IYK++ ++E++ A + WIKDL+ DP I Sbjct: 384 LYKEHGANPLGGCLPLILQIPVFYGIYKLLLYAIELKGAS-FLWIKDLSVMDPYFIL--- 439 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 P++M +SM+I K++P D Q I ++P++F F +++FPA Sbjct: 440 ----------------PVLMGVSMYIHQKLTPTNFQDPMQEKIFKFLPLIFTFMMATFPA 483 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 GL++YW+ +N++SI QQ +I ++ ++ Sbjct: 484 GLVLYWTVNNILSIAQQWLINRIMASKAK 512 >gi|187251668|ref|YP_001876150.1| preprotein translocase subunit [Elusimicrobium minutum Pei191] gi|186971828|gb|ACC98813.1| Pre-protein translocase subunit [Elusimicrobium minutum Pei191] Length = 531 Score = 289 bits (741), Expect = 6e-76, Method: Composition-based stats. Identities = 122/583 (20%), Positives = 234/583 (40%), Gaps = 77/583 (13%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV--DNSYAAVLIDD 60 N + +A + I + +Q FY P+ +E +++ +Q NS Sbjct: 2 ENKKFLMAFLVFFIALLMYQQFYALPKAQEAKAKQEASLVAEQAVTATKSNSSITKTALT 61 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + KGA D + DV+ L+P + Y Sbjct: 62 PSDKQVEEKFYDFSTKVADIKFTSKGAGIKDYIFKDCVGDVN--------LTPYTEEGFY 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 T L + I + I +T + ++ + Sbjct: 114 ------------------TTFPRLTFKEAGRTENSITFTVEEG-YIRINKTYTFNDDGIN 154 Query: 181 KIVDTVTNNSIDQIRFSPRGR-----IMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + ++ N S + I + + + N+ ++ + + ++ + Sbjct: 155 NLSLSIENRSTKEQTLDQFYFNFGPGIGTVESEKSDNSREMK--AVYITQEEGKKFPTFH 212 Query: 236 DIEKSSISNFHESNSWL--GISDKYWASVFIPSK-ETSFHSQFKYLSDGHARY------- 285 + K I + + +W+ G++++Y+ +V IP ++ K + D H R+ Sbjct: 213 NRSKEKIEDSVKDGNWIWAGLNNRYFLAVLIPQNWKSGLLETEKVIVDSHPRFFGLLGKA 272 Query: 286 -----QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 K + +++ P + + G K++ T L + I++G+F Sbjct: 273 KVEGPMLKITVPAMSLPPKSKTVLQSDFYFGPKDYKTFQTMPYSL-----DKSIEFGFFG 327 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + K + ++ Y GN+G+AI++ V ++ L Q+ S+ M+ IQP++ ++ Sbjct: 328 ALGKMVRWVLETLYRFTGNYGVAIIILAVLFQITMLRLTIMQHKSSMVMQKIQPEMKSIQ 387 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E++K Q+AM+ LYK H NP GC P+L+Q+P+F A++ S E+ A F Sbjct: 388 ERYKNDQT-AQQQAMLALYKKHKFNPFMGCLPLLIQLPIFIALFNAFRTSWELHGAGFVW 446 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAMI 519 WI DL+A DP + PI+M MFIQ +++ P +D Q + Sbjct: 447 WITDLSAKDPFYVL-------------------PIVMGGVMFIQQRITAPVGSDPTQTAM 487 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 L WMPV+F F +FPAGL++YW +++IS+ Q + + Sbjct: 488 LKWMPVIFTFVFINFPAGLVLYWLTNSIISLGIQLYMKRKMAK 530 >gi|206603435|gb|EDZ39915.1| Putative inner-membrane protein [Leptospirillum sp. Group II '5-way CG'] Length = 511 Score = 289 bits (740), Expect = 8e-76, Method: Composition-based stats. Identities = 145/573 (25%), Positives = 253/573 (44%), Gaps = 91/573 (15%) Query: 1 MERNWNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M + I +S II Y W + + P Q ++ + ++ Sbjct: 1 MWKRLLPIALIVISFNLIIYYFWG-------------PQNRQKPSTTPKQAISALSVPMV 47 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 +D + + ++N + S++++ Q L YH SN ++LL Sbjct: 48 ND-----TYDQSLSIQNKDVRWSVSMRTGQIYQWTLLHYHHS--SNHKYLSLLDTEKG-- 98 Query: 119 AYFAELDYVSTANNIELP--NSNTVW---NLISGKILTPTTPIKL--VFKNANNILFERT 171 +A + S + +P + VW + G ++ + L +K N++ R Sbjct: 99 --YAGMGLFSRDSGTLVPVLPESIVWDNAQIRPGLVVVSSAGGNLVETYKMNGNVVILRF 156 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV-QEGFIAVLGDKSLV 230 L YL + N S + G + T+G +G + Sbjct: 157 HFLPSGYLI--SSHLENPSHANVV---FGSGLNFGVSALKQTYGTEFQGPVYEATG---- 207 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 K+ +++K F W+G DKY+ +I S + K +G + + S Sbjct: 208 --KFQEMKKDGSLFFDSGLKWVGNEDKYFIG-YIASSTPGPSVEIK--KNGSSSWFQLLS 262 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF--------YFI 342 N + ++ K + + + L ID+GWF F+ Sbjct: 263 KN----------SMDFKIYGEPKRYKLLKEQDSGLI-----DTIDFGWFMFGRILLISFL 307 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+F+LMSY +V N+G+AI+L T+ +K++F PLA Y S M+++QP+I +L+ K Sbjct: 308 AKPIFLLMSYLVGIVHNYGVAIILVTILIKIIFSPLAYMSYKSIYEMQSLQPEIKKLQTK 367 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 FK L +A+++LYK +NPL GC P+L+QIPVF A+Y +++ ++E+R APF WI Sbjct: 368 FKDDKA-ALNQALMELYKERRVNPLGGCLPMLVQIPVFVALYNILNNTVELRQAPFILWI 426 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ DP + PI+M ++M +Q K++P D Q ++ + Sbjct: 427 HDLSLKDPYYVL-------------------PIVMGITMILQYKLNPSSPDPVQQKVMMF 467 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 +PV+ F +FPAGL++YW +NV++I QQ + Sbjct: 468 VPVIMTFFFLNFPAGLVLYWLVNNVLTIGQQYL 500 >gi|295134749|ref|YP_003585425.1| inner hypothetical protein translocase component YidC [Zunongwangia profunda SM-A87] gi|294982764|gb|ADF53229.1| putative inner membrane protein translocase component YidC [Zunongwangia profunda SM-A87] Length = 621 Score = 289 bits (739), Expect = 1e-75, Method: Composition-based stats. Identities = 118/577 (20%), Positives = 240/577 (41%), Gaps = 47/577 (8%) Query: 25 YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID----DRAQALSMSPRVELKNPSLIG 80 P + +N T + + A + + L+N L Sbjct: 46 VTTPANADQQLANQNNTTAPATDSAAIAQAQSRLGAFGYSATLPSAEDKTTVLENDVLRL 105 Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 + KG ++ L+ Y +S V L+ N K L++ +T + Sbjct: 106 EVANKGGYIEEAVLKNYKT---YDSIPVYLVKDGNAK----FNLNFTTTDGRTLDTENLY 158 Query: 141 VWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIV---DTVTN--NSIDQIR 195 IS +KL + + + I Y+ + N N+ I Sbjct: 159 FEPSISKNGEDQVLSMKLKISDNEFLEYRYAIK-PGDYMMDFNIRSQGLANTFNASQPIN 217 Query: 196 FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGIS 255 + + RH + G+ KY D+ + S++ Sbjct: 218 LDWQLKGYRHSKSISYENKYTVLGY-------EYEGDKYDDLGHGEDEETEKDVSYIAYK 270 Query: 256 DKYWASVFI---PSKETSFHSQ-FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 +++S+ + P K + SQ + Y F+AN L + + G Sbjct: 271 QHFFSSILLTDTPFKTSKLTSQNLVEDEEIDTVYTKAFTANIPLELQAGELNYNMNWYYG 330 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF-MLMSYFYNLVGNFGIAIMLTTVF 370 ++ + Y+++L + + WG F +I K +F ++ +++ ++GIAI++ T+ Sbjct: 331 PTDYKILKDYDRNLDEI---VPLGWGIFGWINKYVFIPFFAFLSSVLPSYGIAIIVMTIV 387 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 V+++ P+ K Y+S A MK ++P+I+E+ EK+K + + Q+ ++LY +P++GC Sbjct: 388 VRIVLSPVTYKSYLSQAKMKVLRPEINEINEKYKDNAMKK-QQETMKLYSKAGASPMSGC 446 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 P L+QIP+F+A+++ + ++R + W DL++ D I L +PFY HV Sbjct: 447 LPALMQIPIFYALFQFFPSAFQLRQKS-FLWADDLSSYD--VIAELPFHIPFYG---EHV 500 Query: 491 GIWPIIMSLSMFIQMKM--------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 ++PI+ S+++FI M+M + P ++ P++ +F +++ +GL +Y+ Sbjct: 501 SLFPILASVAIFIYMQMTTGQSMQANQQPGMPNMKFLMYLSPIMMLFFFNNYASGLSLYY 560 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 SN+I+I VI + E + ++++ +K Sbjct: 561 FTSNLITIGIMLVIKHVIVDEDKIHAKIQANKAKPKK 597 >gi|189347989|ref|YP_001944518.1| 60 kDa inner membrane insertion protein [Chlorobium limicola DSM 245] gi|254772766|sp|B3EIM7|OXAA_CHLL2 RecName: Full=Inner membrane protein oxaA gi|189342136|gb|ACD91539.1| 60 kDa inner membrane insertion protein [Chlorobium limicola DSM 245] Length = 583 Score = 289 bits (739), Expect = 1e-75, Method: Composition-based stats. Identities = 118/576 (20%), Positives = 237/576 (41%), Gaps = 43/576 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N +AL +I+ W F + + R QT +Q A L D Sbjct: 1 MD--RNSVTGLALIALIMIVWLQFMSPDKKSVQPDNRPKAQTTATVSQEKTEAPAALRSD 58 Query: 61 -----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + V + N +++ KGA + L+ + + L+S + Sbjct: 59 TFGVFAEASTGAEELVTVDNELFTMTLSSKGATIKSVVLKNH---LDGQLKPFDLVSSHD 115 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLIS---GKILTPTTPIKLVFKNANN--ILFER 170 A ++ + L+S + L+ + ++ N + Sbjct: 116 KG----ALSLLFLNVEGKKIDTRELYFRLVSQEKKQTLSGKKIAVVRYRLDINPQQAIDI 171 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG---VQEGFIAVLGDK 227 + K+ V D ++ + Sbjct: 172 VYRFSGNSY-KVDYDVKLTGFDNALAGNEYQLQWDGGLAYSEKNREDESHNALAGAFLGG 230 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 SLV+ S ++ W+ + +KY+ + IP +T + G ++ Sbjct: 231 SLVKIDASKENQTYREEQSGEAGWVAVRNKYFVAALIPGSKT--EGIYLEGKKGSGHFEE 288 Query: 288 KFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FI 342 ++ ++++ + + + +F L+ G ++ T+ + +L E ++D+GW + F Sbjct: 289 YLASLKMSVPSTEKVASNHFSLYIGPLDYNTVKTLDANL-----EKIMDFGWDWLTRPFA 343 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 + + ++ + N+G+ I++ + +KL+ +PL+ S M +QP + EL+EK Sbjct: 344 EYVILPVFTWMNGFISNYGLIIIIFALLIKLVTYPLSMASTKSMKKMAALQPMLKELQEK 403 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +K +P + LQ + ++YK +NPL GC P++LQ+P+ FA++ V S+++RH + W Sbjct: 404 YKDNPAK-LQSELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQLRHHG-FLWA 461 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-N 521 KDL+ D +I +P Y H+ ++PI+M +++FIQ K++P Q ++ Sbjct: 462 KDLSVPD--SILDFGFSIPVYGD---HIAVFPILMGVTVFIQQKITPTTQSNDQMKMMLY 516 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 PV + ++ PAGL +Y+ NV S+ QQ I Sbjct: 517 IFPVTMLLFFNNLPAGLGLYYLMFNVFSVAQQFYIN 552 >gi|322437354|ref|YP_004219566.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX9] gi|321165081|gb|ADW70786.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX9] Length = 607 Score = 289 bits (739), Expect = 1e-75, Method: Composition-based stats. Identities = 143/623 (22%), Positives = 240/623 (38%), Gaps = 81/623 (13%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN------ERKNIQTVKQPNQVDNSYAA 55 + N + F +A+ +++ Q + + + ++ N T V Sbjct: 14 QDNRSLFTIMAIMILVFAGLQFWRAKHNPQTASPNGQTQQQQANQPTPTVAASVAGQTIQ 73 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 V A + S V ++N + + KGAQ L+ Y P+ + + + Sbjct: 74 VPAVQPVVAAAESTTV-VENELYKITFSNKGAQATSWILKKYKDSYG--QPLDLVHTLAA 130 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN-ILFERTISL 174 Y L + L N+ + + T P L FK + +T S Sbjct: 131 QTVGYPLSLYTYDPSLTASLNNALYLPSATGN----ITAPQTLTFKYVSGEYQVTKTFSF 186 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD--KSLVEQ 232 D+ Y+ V N IR FG QE + G EQ Sbjct: 187 DDTYILHADTQVLRNGS-PIRA----------LVAWPGGFGDQEDAKSYGGSQVDYSQEQ 235 Query: 233 KYSDIEKSSISNFHESNS---WLGISDKYWASVFIPSKETSFH-------------SQFK 276 K + ++ + N W G SD Y+A++F+P S ++ Sbjct: 236 KEKHLAVGKVTGGNTLNGSFDWAGASDLYFAAIFLPDAPDSATVATLDSSIIVPKANRHN 295 Query: 277 YLSDGHARYQAKFSANEITILP-------GKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 L G + +P S T LFAG K + + Sbjct: 296 GLGHGVPVAPKGEPGKDEIKVPIIGAAVGDLSGHTQTRLFAGPKAVAVLRNVHSAGNKTS 355 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 E L+D+G+F I K +F+ + + V N+G I++ TV + LL PL K S Sbjct: 356 LEPLLDFGFFGIIGKYLFLALFAIHQYVTPNWGWCIVILTVLINLLILPLRIKTMQSGLK 415 Query: 389 MKNIQPKIDELREKFK-----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 M+ IQP++D ++ ++K + ++QL K + +N GC P L+Q+P+ FA Sbjct: 416 MQRIQPQMDAVKARYKNLKVTDPKRNEMNAEIMQLQKDNGVNMFGGCVPTLIQMPLLFAF 475 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + ++ +E+R A W W+ DL++ADP +I PI+M +S F+ Sbjct: 476 FGMLPKVVELRQA-HWFWLPDLSSADPYHIL-------------------PILMVISQFL 515 Query: 504 QMKMSPPPA-DKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM-H 560 +P P D Q ++ MPV + ++ +GL +YWS N+ISI Q ++ K Sbjct: 516 VQFYTPSPGVDPQQQKMMAFMMPVFSGYMTWNYSSGLALYWSVGNLISIATQFIMNKTSI 575 Query: 561 GAEIGLI--DRLRSTFSKNYNSQ 581 G E+ I R R + NS+ Sbjct: 576 GQEMREIAAKRARRKAGEGVNSK 598 >gi|320536044|ref|ZP_08036102.1| membrane protein insertase, YidC/Oxa1 family protein [Treponema phagedenis F0421] gi|320147094|gb|EFW38652.1| membrane protein insertase, YidC/Oxa1 family protein [Treponema phagedenis F0421] Length = 609 Score = 288 bits (738), Expect = 1e-75, Method: Composition-based stats. Identities = 142/613 (23%), Positives = 267/613 (43%), Gaps = 43/613 (7%) Query: 5 WNYFVAIALSVIIVYAWQNF----YVYPRIEEMNNER-----KNIQTVKQPNQVDNSYAA 55 N +AI LS +++ Y P EE + ++ +TV Q V + Sbjct: 3 KNTLIAIILSTLVIIGSTYLQLKLYPPPAQEEQQPAQSEKSVQSTETVPQNTFVAETELG 62 Query: 56 VLIDDRAQALSM--------SPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + LS + ++ +K + S KG L H S Sbjct: 63 SKSAGGVEFLSNPDSDDQNLTEKIYTVKTSLVEASFTNKGGDIISYKLLE-HYGADSTEN 121 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 + + + + + A+ L + +L + + + I + ++A+ Sbjct: 122 VEMIKNLTESNRAFSIALGNQTAPIVDQLFHVKEEKLSGGAQAIGFYKTISIRNQDASIS 181 Query: 167 LF---ERTISLDEHYLFKIVDTVT-NNSIDQIRFSPRGRIMRHKPQTAT--NTFGVQEGF 220 F +R I ++Y+F++ ++ + S+ + F+ G ++ PQ NT E Sbjct: 182 SFILAKRYIFYPDNYMFELQVSINGDESLKGLNFNSAGYTLKTPPQIGPDWNTADKYEYR 241 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-S 279 + K + K ++ S+ + W+ IS KY+ ++ IP + S F Sbjct: 242 TFMSFSKEKEKTKSYTLKTDSVQEITDPVGWVSISGKYFTTIVIPQDSNTIQSTFLLAPK 301 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID---- 335 + + Q A I+ G +I ++ G + Y P I Sbjct: 302 NAQSPIQDNQIALIRKIIAGSAIIDIYHVYIGPCTENYLSPYNIPSKNPFQLDNIRIDSV 361 Query: 336 ---WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 G Y + + ++ +FY ++ N+G+AI+L T+ +KLLF+PL KK +V++ M+ + Sbjct: 362 AASGGLLYPLEVGLKWVLQFFYKIIPNWGVAIILVTLLIKLLFYPLTKKSFVASQRMQEL 421 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP++ ++ K+K +P Q L + M + YK NPL+GC +L+Q+P FA+Y++ + E Sbjct: 422 QPQMQTIQAKYKNNP-QKLNEEMAKFYKEAGYNPLSGCLTLLVQMPFLFAMYRLFNNYFE 480 Query: 453 MRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 R A F WI DL+ D +I+ L +PF+ G+ + + PI+ +S + K++ PP Sbjct: 481 FRGAMFIPHWIPDLSIGD--SIWKLPFTVPFF--GWTDLRLLPILYVVSQIVFSKITQPP 536 Query: 512 ADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 A + Q M+L +MPV F F + P+GL++YW+ N++++VQQ I + Sbjct: 537 ATEQQNSSMKMMLYFMPVFFFFLFYNAPSGLLVYWTAMNLMTLVQQLFIKQTMHHTSDAK 596 Query: 568 DRLRSTFSKNYNS 580 ++ + K Sbjct: 597 NKKEVKYGKGAKK 609 >gi|284036928|ref|YP_003386858.1| membrane protein insertase [Spirosoma linguale DSM 74] gi|283816221|gb|ADB38059.1| membrane protein insertase, YidC/Oxa1 family [Spirosoma linguale DSM 74] Length = 621 Score = 288 bits (738), Expect = 1e-75, Method: Composition-based stats. Identities = 122/611 (19%), Positives = 246/611 (40%), Gaps = 62/611 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN-----IQTVKQPNQVDNSYAA 55 M+RN + I L + ++ +Q P E+ ++ + + +A Sbjct: 1 MDRNQ--LIGIVLILAMLVGYQLLVPKPAPEKQAAQQTQPTKPTTASGVAATDTGAANSA 58 Query: 56 VLIDDRAQ-----------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 D A A + + ++N + + +G + ++ L+ Y + Sbjct: 59 QQTPDSAALTAKFGDFATVATGQARDIVVENNDIKVTFTTQGGRVKEVVLKKYKT---FD 115 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 + L+ +++ L+ + ++L G + + + A Sbjct: 116 QKPLVLIDEKSSQT----LLELPTNQGKVDLHKLYYQTTAQGGTVSGQAQQLVFRAEVAP 171 Query: 165 NILFERTISLD-EHYLFKIVDTVTNNSID----QIRFSPRGRIMRHKPQTATNTFGVQEG 219 E+ ++ E Y+ + S IRF + ++ +++ + N Sbjct: 172 GQSVEQVYTIPAEGYVLDYDLKLNGLSNAIGTGDIRFFWQDKMRQYENDLSNNRRAAT-- 229 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 I L E K ++ E + + E W I KY+ S F+ + FK L Sbjct: 230 -INYLTADEDFE-KLTEGESNQEATVEEPVQWFTIKHKYFLSGFVARNSPLTKANFKALV 287 Query: 280 DGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + K + ++T I K+ LF G +F + P F+ + G Sbjct: 288 NPADSSVVKTAIADVTLPIADVKAGKGQYKLFYGPNDFQLL-----GSVAPEFDQNVYLG 342 Query: 338 --WFYFIAKPMF-MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 I K F + ++ + N+G+ I+ VFVKL+ PL K Y+S A M+ +QP Sbjct: 343 YSILKPINKYFFVPVFNFLEKFIANYGLLIIALVVFVKLILTPLTYKSYISMAKMRVLQP 402 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++E++E+ Q ++LY+ ++PL+GC P+L +P+ F+++ + +E+R Sbjct: 403 ELNEMKERVGDD-MAKQQSEQMKLYQEVGVSPLSGCVPVLATMPILFSLFMLFPNLIELR 461 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPP 510 + W DL+ D F F LPF H+ ++ ++M++S + + +P Sbjct: 462 QKS-FLWANDLSTYD---AFITFPTLPFIGS---HLSLFTVLMTISSIAYAYYNNQTTPT 514 Query: 511 PADK-GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + P++F+F L+S+PAGL Y+ SNV++I QQ +I + D+ Sbjct: 515 QPGPVNMKAMSYVFPLMFMFVLNSYPAGLTFYYFVSNVVTIAQQQLIRRFVDE-----DK 569 Query: 570 LRSTFSKNYNS 580 +++ +N Sbjct: 570 IKAVLDENRRK 580 >gi|124516563|gb|EAY58071.1| putative inner-membrane protein [Leptospirillum rubarum] Length = 511 Score = 288 bits (738), Expect = 1e-75, Method: Composition-based stats. Identities = 149/572 (26%), Positives = 254/572 (44%), Gaps = 89/572 (15%) Query: 1 MERNWNYFVAIALSV--IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M + I +S II Y W + ++ P Q ++ + ++ Sbjct: 1 MWKRLLPIALIVISFNLIIYYFWG-------------PQNRQKSSTTPKQAISALSLPMV 47 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 +D + ++N + S++L+ Q L YH S+ ++LL +T+ Sbjct: 48 NDIYD-----QSLSIQNKDVRWSVSLRTGQIYKWTLLHYHHS--SDHKYLSLL---DTQK 97 Query: 119 AYFAELDYVSTANNIELP--NSNTVW---NLISGKILTPTTPIKL--VFKNANNILFERT 171 Y A + S + +P + VW + G ++ +T L ++ N++ R Sbjct: 98 GY-AGMGLFSRDSGTLVPVLPESIVWENNQIHPGLVVVSSTGGNLVETYRIKGNVVTLRM 156 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 L YL + N S + G + T+G + G E Sbjct: 157 HFLPSGYLVSA--HLENPSHVNVV---FGSGLNFGVSALKQTYGTEFQGPVYEGAGKFQE 211 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 K K F W+G DKY+ +I S F + K +G + + S Sbjct: 212 VK-----KDGSLFFDSGLKWVGNEDKYFIG-YIASSTPGFSVEIK--KNGSSSWFQLLSK 263 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF--------YFIA 343 N + ++ K + + + L ID+GWF F+A Sbjct: 264 N----------SIDFKIYGEPKRYKLLKEQDSGLI-----DTIDFGWFMFGRILLISFLA 308 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F+LMSY +V N+G+AI+L T+ +K++F PLA Y S M+++QP+I +L+ KF Sbjct: 309 KPIFLLMSYLVGIVHNYGVAIILVTILIKIIFSPLAYMSYKSIYEMQSLQPEIKKLQTKF 368 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K L +A+++LYK +NPL GC P+L+QIPVF A+Y +++ ++E+R APF WI Sbjct: 369 KDDKA-ALNQALMELYKERRVNPLGGCLPMLVQIPVFVALYNILNNTVELRQAPFILWIH 427 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP + PI+M ++M +Q K++P D Q ++ ++ Sbjct: 428 DLSLKDPYYVL-------------------PIVMGITMILQYKLNPSSPDPVQQKVMMFV 468 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 PV+ F +FPAGL++YW +NV++I QQ + Sbjct: 469 PVIMTFFFLNFPAGLVLYWLVNNVLTIGQQYL 500 >gi|167751879|ref|ZP_02424006.1| hypothetical protein ALIPUT_00121 [Alistipes putredinis DSM 17216] gi|167660120|gb|EDS04250.1| hypothetical protein ALIPUT_00121 [Alistipes putredinis DSM 17216] Length = 653 Score = 288 bits (737), Expect = 2e-75, Method: Composition-based stats. Identities = 133/642 (20%), Positives = 257/642 (40%), Gaps = 76/642 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY-----AA 55 M+ I + +I + FY + ++ + + Q + A Sbjct: 1 MD--KKSIAGIVIVALIFLGF-TFYNSHQQKKYQEQLMAYNAEQARIQAEQDSLLALNAP 57 Query: 56 VLIDDRAQALSMSPRV-----------------------------ELKNPSLIGSINLKG 86 + D A + R+ ++N L + +G Sbjct: 58 LPTADSAAIAAAGERLSGDSLQAQRRIMQFGELLAAAQQAEAEEFTVENEVLKIDFSTRG 117 Query: 87 AQFDDLNLRGY--HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWN 143 Q D+ L+ Y + + V L P+ A FA YV NN+ + ++ +N Sbjct: 118 GQVKDVTLKDYTKYAPRDERNQPVRLFDPA---TANFALTFYVKNGHNNVLVNTADYTFN 174 Query: 144 LISGKILTPTTP-IKLVFKNANNILFERTISL------DEHYLFKIVDTVTNNSIDQIRF 196 L+S + I + A + + + YL + + N + Sbjct: 175 LVSMEKDADGAQRITMDLPVARDAVLRYEYVVYNIQSPARDYLVDLNVYLKNMAPQMASQ 234 Query: 197 SPRGRIMRHKP-QTATNTFGVQEGFIAVL---GDKSLVEQKYSDIEKSSISNFHESNSWL 252 + G ++ Q G+ S + SD EK S +W+ Sbjct: 235 TTIGIDWSNRSYQNEKGFQNENTYTTIYYRAPGESSADDLGISDGEKQK--TVSSSLNWV 292 Query: 253 GISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 ++++SV I + S+ ++ + Y FSA ++ + G Sbjct: 293 AFKQQFFSSVMIAPENFSYADMKFTTAEKGSGYIKDFSAKLTVPYTAQTDHYNFAFYFGP 352 Query: 313 KEFPTIHHYEKDLAIP--RFEMLIDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLT 367 ++ + H E LI GW F + ++ + + +FG+ I++ Sbjct: 353 NKYAILKHVATTEGDDELHLERLIPLGWGIFGWVNRWFVIPVFDFLRQFIPSFGLIILIL 412 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINP 426 V VK++ PL K Y+STA M+ I+P++DEL +K+ +Q Q+A ++LYK INP Sbjct: 413 AVLVKVIISPLTYKSYISTAKMRVIKPEVDELAKKYPRQEDAMKRQQATMELYKKAGINP 472 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 + GC P+L+Q+P+ A+++ S+E+R + W DL++ D ++ +L +PFY Sbjct: 473 MGGCIPLLIQMPIIIAMFRFFPASIELR-GQHFLWADDLSSYD--SVLSLPFNIPFYGD- 528 Query: 487 FMHVGIWPIIMSLSMFI------QMKMSPPPADKGQAMIL-NWMPVVFVFALSSFPAGLI 539 HV ++ ++M++++F Q S P G ++ MPV+ + +S+ +GL Sbjct: 529 --HVSLFALLMTVALFAFSYINYQQTASSQPQMAGMKFMMVYLMPVMMLLWFNSYSSGLT 586 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 Y+ +N+++I Q VI +M E + +++ +KN N + Sbjct: 587 YYYFLANILTIGQTLVIRRMIDDE-KIHAVMQANAAKNKNRK 627 >gi|283954517|ref|ZP_06372036.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 414] gi|283793921|gb|EFC32671.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 414] Length = 454 Score = 287 bits (734), Expect = 4e-75, Method: Composition-based stats. Identities = 133/499 (26%), Positives = 234/499 (46%), Gaps = 65/499 (13%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN 131 ++++ I+ G + L+ + L++ N+ Y E+ + + Sbjct: 4 KVQSKHFEAQIDSFG-RISAFYLKDKKYQNDKGE-FINLINKENSP--YPLEMRFSDPSV 59 Query: 132 NIELPNSNTVWNLISGKILTPTT---PIKLVFKNANNILFERTISL--DEHYLFKIVDTV 186 N E T + + +KL +N + + E+ I+ Y ++ + Sbjct: 60 NSE--AFKTPYVANINNLFVDENGSQVLKLT-QNLSGLKIEKNITFYAKGSYEIEVKLSK 116 Query: 187 TNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 N ++P A +++ V G + + +++ + D+EK N Sbjct: 117 NAN---------YFISPGYRPNIAVDSYTVH-GALVMDSKETIETYEDGDVEKDESVNNV 166 Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS-ITTT 305 S D+Y+A+ F Y D +N+ I+ S Sbjct: 167 VMTS--AF-DRYYAT-------------FFYNFDKPLNVVISKDSNKNPIVFAYSDNEFK 210 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + G+KE + + PR E ++++GWF FIAKPMF + + + +GN+G AI+ Sbjct: 211 AGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLDFLHQYIGNWGWAIV 265 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T+ V+++ FPL K +S +K++ PK+ ++RE++K P Q + M++LYK H N Sbjct: 266 VMTLIVRIVLFPLTYKSMISMNKLKDLAPKMKDIRERYKGDP-QKMNMHMMELYKKHGAN 324 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P++GC PILLQIP+FFAIY+V+ ++E++ AP+ W+ DL+ DP I Sbjct: 325 PMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWVHDLSVMDPYFIL----------- 373 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 PI+M +MF+Q ++P D QA I+ ++PV+F F +FPAGL +YW Sbjct: 374 --------PILMGATMFLQQLITPMAIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFI 425 Query: 545 SNVISIVQQAVIMKMHGAE 563 +N+ S+VQQ VI K+ E Sbjct: 426 NNLCSLVQQWVINKIFAKE 444 >gi|119358504|ref|YP_913148.1| protein translocase subunit yidC [Chlorobium phaeobacteroides DSM 266] gi|166975858|sp|A1BJZ7|OXAA_CHLPD RecName: Full=Inner membrane protein oxaA gi|119355853|gb|ABL66724.1| protein translocase subunit yidC [Chlorobium phaeobacteroides DSM 266] Length = 579 Score = 287 bits (734), Expect = 4e-75, Method: Composition-based stats. Identities = 122/578 (21%), Positives = 245/578 (42%), Gaps = 47/578 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N +AL +I+ W F ++ E + + AA + D+ Sbjct: 1 MD--RNSVTGLALIAMIMIVWLQFMSPENKPKLRTEPVKKELATSAAVTPGAPAAPVGDN 58 Query: 61 R---AQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 A A + + ++ ++N +++ KGA + L+ + + + L+S + Sbjct: 59 LGIFATASAGAEQLQTVENDLFKVTLSSKGATIKSVVLKQH---LDGHLKQFNLVSTPDK 115 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERT 171 A + + ++ + + +S L T I+ V T Sbjct: 116 G----ALSLLFLSNDGKKIDTRDLYFRSVSLDTLKTLSGTERYVIRYVLDVTPEKAIAIT 171 Query: 172 ISLDEH-YLFKIVDTVT--NNS--IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 + Y +T NN+ ++ + G ++ + + Sbjct: 172 YGFSGNSYRIDYDVKLTGFNNALVGNEYQVQWDGGLVYSEKNREDES---HNALAGSYLG 228 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS--FHSQFKYLSDGHAR 284 S V+ S ++S W+ + +KY+ + IP T F K + Sbjct: 229 GSFVKLDASKDKESYREEQSGLAKWVALRNKYFVAAIIPRGATEGIFLEGRKTAATHFED 288 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY---- 340 Y A + P S + + L+ G ++ T+ DL E ++D+GW + Sbjct: 289 YLAALKMSVSATEPVSSNSYS--LYVGPLDYNTVKSLGVDL-----EKIMDFGWDWLTRP 341 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F + ++ V N+G+ I++ + +KL+ +PL+ S M +QP + EL+ Sbjct: 342 FAEYIILPAFTWMNRFVSNYGLIIIIFALLIKLVTYPLSMASTKSMKKMSALQPALKELQ 401 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K +P + LQ + ++YK +NPL GC P++LQ+P+ FA++ V S+++RH + Sbjct: 402 EKYKDNPAK-LQSELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQLRHHG-FL 459 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI 519 W KDL+ D +I +P Y H+ ++PI+M++++F+Q K++P ++ ++ Sbjct: 460 WAKDLSVPD--SILDFGFAIPMYGD---HIAVFPILMAITVFVQQKITPTAQSNEQMKIM 514 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + P + + ++ PAGL +Y+ N+ S+ QQ I Sbjct: 515 MYMFPAMMLLFFNNLPAGLGLYYLMFNIFSVAQQFYIN 552 >gi|150007175|ref|YP_001301918.1| putative inner membrane protein translocase component YidC [Parabacteroides distasonis ATCC 8503] gi|166975877|sp|A6L9D2|OXAA_PARD8 RecName: Full=Inner membrane protein oxaA gi|149935599|gb|ABR42296.1| membrane protein, putative [Parabacteroides distasonis ATCC 8503] Length = 633 Score = 286 bits (733), Expect = 5e-75, Method: Composition-based stats. Identities = 131/635 (20%), Positives = 259/635 (40%), Gaps = 93/635 (14%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYA 54 M+ N + L ++++A+ ++ P E++ +R I+ +Q Sbjct: 1 MD--KNTLIGFLLIGVVLFAFS-WFNRPTPEQLEAQRRYQDSIAKIEYAQQLELQKQENK 57 Query: 55 AVLIDDRAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLN 93 + L++D + L S R L+N + I+ KG + Sbjct: 58 SALVEDSLENLPDSVRAQRLQQSFGVFGDAMVGTEDYTTLQNDVVELRISNKGGRICYAR 117 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ Y D ++ P+V L + + + TA N + S+ + + G Sbjct: 118 LKEY--DTYNDEPLV-LFDEKESNFNF-----TLVTATNRVVNTSDLYFTPVKGN---DP 166 Query: 154 TPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNS----------------IDQIRF 196 + + + T +L + Y+ + + IR Sbjct: 167 NSVIMRLNTGEGSHLDFTYTLKPDDYM--VQYQILGTGLNGVLAPSTNALDLLWEQDIRQ 224 Query: 197 SPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISD 256 +GR + T F D + + SD W+G D Sbjct: 225 QEKGRKFEDRYVTLNYKFMA--------DDVEHLSESKSD-----SKQIPNRLKWIGYKD 271 Query: 257 KYWASVFIPSKETSFHSQ-FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315 ++++V I + + K + +G Q K +A+ L GK T +F + G +F Sbjct: 272 MFFSTVLISQEGFEATTLDSKAIPEGDVLKQFKTTASVPFDLQGKEATNLSF-YFGPNKF 330 Query: 316 PTIHHYEKDLAIPR---FEMLIDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTV 369 + ++K ++ + E L+ GW F + ++ + + N+GI I+L T+ Sbjct: 331 ALLKSFDKGVSAEQQLDLEKLVPLGWGIFRWVNQYFVIPLFDFLGKFIHNYGILILLMTI 390 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLA 428 VK++ FPL K Y+S+A M+ ++P+++E+ K+ Q QKA ++LY +P++ Sbjct: 391 IVKIILFPLTYKSYMSSAKMRVLRPQVEEINAKYPGQDKAMERQKATMELYSRAGASPMS 450 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF- 487 GC P+LLQ+P+ A++ ++E+RH + W DL+ D IF+ +P P F Sbjct: 451 GCLPMLLQMPILIALFMFFPSAIELRHQS-FLWAHDLSTYD--AIFSWNKYIPIITPYFG 507 Query: 488 MHVGIWPIIMSLSMFIQMKMSP------PPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 H+ ++ ++M+++ K + G ++ MP++F+ + + +GL Y Sbjct: 508 NHISLFCLLMTITNIFYTKYNMEMTNTGQQQMPGMKAMMYMMPLMFLVFFNQYASGLTYY 567 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + S +I+IVQ +I + E L+ +L + K Sbjct: 568 YFISTLITIVQT-LIFRYTINEDKLLAKLEANKRK 601 >gi|298377600|ref|ZP_06987552.1| inner membrane protein OxaA [Bacteroides sp. 3_1_19] gi|298265619|gb|EFI07280.1| inner membrane protein OxaA [Bacteroides sp. 3_1_19] Length = 633 Score = 286 bits (733), Expect = 5e-75, Method: Composition-based stats. Identities = 131/635 (20%), Positives = 258/635 (40%), Gaps = 93/635 (14%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYA 54 M+ N + L ++++A+ ++ P E++ +R I+ +Q Sbjct: 1 MD--KNTLIGFLLIGVVLFAFS-WFNRPTPEQLEAQRRYQDSIAKIEYAQQLELQKQENK 57 Query: 55 AVLIDDRAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLN 93 + L++D + L S R L+N + I+ KG + Sbjct: 58 SALVEDSLENLPDSVRAQRLQQSFGVFGDAMVGTEDYTTLQNDVVELRISNKGGRICYAR 117 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ Y D ++ P+V L + + + TA N + S+ + + G Sbjct: 118 LKEY--DTYNDEPLV-LFDEKESNFNF-----TLVTATNRVVNTSDLYFTPVKGN---DP 166 Query: 154 TPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNS----------------IDQIRF 196 + + + T +L + Y+ + + IR Sbjct: 167 NSVIMRLNTGEGSHLDFTYTLKPDDYM--VQYQILGTGLNGVLAPSTNALDLLWEQDIRQ 224 Query: 197 SPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISD 256 +GR + T F D + + SD W+G D Sbjct: 225 QEKGRKFEDRYVTLNYKFMA--------DDVEHLSESKSD-----SKQIPNRLKWIGYKD 271 Query: 257 KYWASVFIPSKETSFHSQ-FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315 ++++V I + + K + +G Q K +A+ L GK TT + G +F Sbjct: 272 MFFSTVLISQEGFEATTLDSKAIPEGDVLKQFKTTASVPFDLQGKE-TTNLSFYFGPNKF 330 Query: 316 PTIHHYEKDLAIPR---FEMLIDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTV 369 + ++K ++ + E L+ GW F + ++ + + N+GI I+L T+ Sbjct: 331 ALLKSFDKGVSAEQQLDLEKLVPLGWGIFRWVNQYFVIPLFDFLGKFIHNYGILILLMTI 390 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLA 428 VK++ FPL K Y+S+A M+ ++P+++E+ K+ Q QKA ++LY +P++ Sbjct: 391 IVKIILFPLTYKSYMSSAKMRVLRPQVEEINAKYPGQDKAMERQKATMELYSRAGASPMS 450 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF- 487 GC P+LLQ+P+ A++ ++E+RH + W DL+ D IF+ +P P F Sbjct: 451 GCLPMLLQMPILIALFMFFPSAIELRHQS-FLWAHDLSTYD--AIFSWNKYIPIITPYFG 507 Query: 488 MHVGIWPIIMSLSMFIQMKMSP------PPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 H+ ++ ++M+++ K + G ++ MP++F+ + + +GL Y Sbjct: 508 NHISLFCLLMTITNIFYTKYNMEMTNTGQQQMPGMKAMMYMMPLMFLVFFNQYASGLTYY 567 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + S +I+IVQ +I + E L+ +L + K Sbjct: 568 YFISTLITIVQT-LIFRYTINEDKLLAKLEANKRK 601 >gi|255015211|ref|ZP_05287337.1| putative inner membrane protein translocase component YidC [Bacteroides sp. 2_1_7] Length = 633 Score = 286 bits (733), Expect = 5e-75, Method: Composition-based stats. Identities = 131/635 (20%), Positives = 259/635 (40%), Gaps = 93/635 (14%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYA 54 M+ N + L ++++A+ ++ P E++ +R I+ +Q Sbjct: 1 MD--KNTLIGFLLIGVVLFAFS-WFNRPTPEQLEAQRRYQDSIAKIEYAQQLELQKQENK 57 Query: 55 AVLIDDRAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLN 93 + L++D + L S R L+N + I+ KG + Sbjct: 58 SALVEDSLENLPDSVRAQRLQQSFGVFGDAMVGTEDYTTLQNDVVELRISNKGGRICYAR 117 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ Y D ++ P+V L + + + TA N + S+ + + G Sbjct: 118 LKEY--DTYNDEPLV-LFDEKESNFNF-----TLVTATNRVVNTSDLYFTPVKGN---DP 166 Query: 154 TPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNS----------------IDQIRF 196 + + + T +L + Y+ + + IR Sbjct: 167 NSVIMRLNTGEGSHLDFTYTLKPDDYM--VQYQILGTGLNGVLAPSTNALDLLWEQDIRQ 224 Query: 197 SPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISD 256 +GR + T F D + + SD W+G D Sbjct: 225 QEKGRKFEDRYVTLNYKFMA--------DDVEHLSESKSD-----SKQIPNRLKWIGYKD 271 Query: 257 KYWASVFIPSKETSFHSQ-FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315 ++++V I + + K + +G Q K +A+ L GK T +F + G +F Sbjct: 272 MFFSTVLISQEGFEATTLDSKAIPEGDVLKQFKTTASVPFDLQGKEATNLSF-YFGPNKF 330 Query: 316 PTIHHYEKDLAIPR---FEMLIDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTV 369 + ++K ++ + E L+ GW F + ++ + + N+GI I+L T+ Sbjct: 331 ALLKSFDKGVSAEQQLDLEKLVPLGWGIFRWVNQYFVIPLFDFLGKFIHNYGILILLMTI 390 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLA 428 VK++ FPL K Y+S+A M+ ++P+++E+ K+ Q QKA ++LY +P++ Sbjct: 391 IVKIILFPLTYKSYMSSAKMRVLRPQVEEINAKYPGQDKAMERQKATMELYSRAGASPMS 450 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF- 487 GC P+LLQ+P+ A++ ++E+RH + W DL+ D IF+ +P P F Sbjct: 451 GCLPMLLQMPILIALFMFFPSAIELRHQS-FLWAHDLSTYD--AIFSWNKYIPIITPYFG 507 Query: 488 MHVGIWPIIMSLSMFIQMKMSP------PPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 H+ ++ ++M+++ K + G ++ MP++F+ + + +GL Y Sbjct: 508 NHISLFCLLMTITNIFYTKYNMEMTNTGQQQMPGMKAMMYMMPLMFLVFFNQYASGLTYY 567 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + S +I+IVQ +I + E L+ +L + K Sbjct: 568 YFISTLITIVQT-LIFRYTINEDKLLAKLEANKRK 601 >gi|78187971|ref|YP_376014.1| Oxa1/60 kDa IMP family protein [Chlorobium luteolum DSM 273] gi|123582400|sp|Q3B110|OXAA_PELLD RecName: Full=Inner membrane protein oxaA gi|78167873|gb|ABB24971.1| protein translocase subunit yidC [Chlorobium luteolum DSM 273] Length = 585 Score = 286 bits (733), Expect = 5e-75, Method: Composition-based stats. Identities = 129/594 (21%), Positives = 250/594 (42%), Gaps = 74/594 (12%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+RN IAL +I+ + + P + + + + V D AAV Sbjct: 1 MDRNSVTGLALIALIMIVWLQFMSPEKKPLQQVTDAGKARTEQVAAEINSDMQPAAVPAT 60 Query: 60 DR-----AQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + A A S + R+ + N ++ KGA L L+ + + N L+S Sbjct: 61 EDSFGMFAPAASGTERLTVIDNDLFHAVVSSKGATLKSLVLKKH---LDGNLKPFDLVSD 117 Query: 114 S-----------------NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 + +T++ YFA + + + L L+P I Sbjct: 118 AKNGALSMLFLTREGRRIDTRDLYFAGSSL----DTLHTIKGKETYALSYRLALSPRQSI 173 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSI----DQIRFSPRGRIMRHKPQTATN 212 ++ + T + + Y +T S ++ + G + + Sbjct: 174 EVSY----------TFT-GDSYRIGYDVKLTGLSGSLAGNEYQVQWDGGLPYTEKNRDDE 222 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS---WLGISDKYWASVFIPSKET 269 Q + SLV+ D EK S E + W+ + +KY+ + IP T Sbjct: 223 ARSAQ---ASAYLGGSLVKL---DAEKDGRSYREEQSGDARWVAVRNKYFIAALIPEDRT 276 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIP 328 + + Y+ ++ ++ + + + + F L+ G ++ T+ D+ Sbjct: 277 A-GFYLDGQKERGNAYENYLASLKMEVPASEEVVDSRFSLYLGPLDYNTVKAQHADI--- 332 Query: 329 RFEMLIDWGWFY----FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 E ++D+GW + F + ++ V N+G+ I++ +KL+ +PL+ Sbjct: 333 --EKIMDFGWDWLTRPFAEFVILPAFTWMNRFVSNYGLIIIIFAFLIKLVTYPLSTASTK 390 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S M +QP + EL++K+K +P + LQ + ++YK +NPL GC P++LQ+P+ FA++ Sbjct: 391 SMKKMAALQPMLKELQDKYKDNPAK-LQSELGRIYKEAGVNPLGGCLPVVLQMPLLFAMF 449 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 V S+++R + W+KDL+ D +I +P Y H+ + PI+M++++F+Q Sbjct: 450 YVFRSSIQLRQHG-FLWVKDLSVPD--SILDFGFTIPMYGS---HIALLPILMAVTVFLQ 503 Query: 505 MKMSPPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 K++P Q I+ P + + ++ P+GL +Y+ NV S+ QQ I Sbjct: 504 QKITPTAQSNDQMKIMLYMFPAMMLLFFNNMPSGLALYYLMFNVFSVAQQFYIN 557 >gi|301311160|ref|ZP_07217088.1| inner membrane protein OxaA [Bacteroides sp. 20_3] gi|300830734|gb|EFK61376.1| inner membrane protein OxaA [Bacteroides sp. 20_3] Length = 633 Score = 286 bits (731), Expect = 1e-74, Method: Composition-based stats. Identities = 129/635 (20%), Positives = 255/635 (40%), Gaps = 93/635 (14%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYA 54 M+ N + L ++++A+ ++ P E++ +R I+ +Q Sbjct: 1 MD--KNTLIGFLLIGVVLFAFS-WFNRPTPEQLEAQRRYQDSIAKIEYAQQLELQKQENK 57 Query: 55 AVLIDDRAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLN 93 + L++D + L S R L+N + I+ KG + Sbjct: 58 SALVEDSLENLPDSVRAQRLQQSFGVFGEAMVGTEDYTTLQNDVVELRISNKGGRICYAR 117 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ Y D ++ P+V L + + + TA N + + + + G Sbjct: 118 LKEY--DTYNDEPLV-LFDEKESNFNF-----TLVTATNRVVNTGDLYFTPVKGN---DP 166 Query: 154 TPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNS----------------IDQIRF 196 + + + T +L + Y+ + + IR Sbjct: 167 NSVIMRLNTGEGSHLDFTYTLKPDDYM--VQYQILGTGLNGVLAPSTNALDLLWEQDIRQ 224 Query: 197 SPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISD 256 +GR + T F D + + SD W+G D Sbjct: 225 QEKGRKFEDRYVTLNYKFMA--------DDVEHLSESKSD-----SKQIPNRLKWIGYKD 271 Query: 257 KYWASVFIPSKETSFHSQ-FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315 ++++V I + + K + +G Q K + + L GK T L+ G +F Sbjct: 272 MFFSTVLISQEGFEATTLDSKAIPEGDVLKQFKTTTSVPFDLQGKEAT-NLSLYFGPNKF 330 Query: 316 PTIHHYEKDLAIPR---FEMLIDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTV 369 + ++K + + E L+ GW F + ++ + + N+GI I+L T+ Sbjct: 331 ALLKSFDKGVVAEQQLDLEKLVPLGWGIFRWVNQYFVIPLFDFLGKFIHNYGILILLMTI 390 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLA 428 VK++ FPL K Y+S+A M+ ++P+++E+ K+ Q QKA ++LY +P++ Sbjct: 391 IVKIILFPLTYKSYMSSAKMRVLRPQVEEINAKYPGQDKAMERQKATMELYSRAGASPMS 450 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF- 487 GC P+LLQ+P+ A++ ++E+RH + W DL+ D IF+ +P P F Sbjct: 451 GCLPMLLQMPILIALFMFFPSAIELRHQS-FLWAHDLSTYD--AIFSWNKYIPIITPYFG 507 Query: 488 MHVGIWPIIMSLSMFIQMKMSP------PPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 H+ ++ ++M+++ K + G ++ MP++F+ + + +GL Y Sbjct: 508 NHISLFCLLMTITNIFYTKYNMEMTNTGQQQMPGMKAMMYMMPLMFLVFFNQYASGLTYY 567 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + S +I+IVQ +I + E L+ +L + K Sbjct: 568 YFISTLITIVQT-LIFRYTINEDKLLAKLEANKRK 601 >gi|237709873|ref|ZP_04540354.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|265753525|ref|ZP_06088880.1| inner membrane protein oxaA [Bacteroides sp. 3_1_33FAA] gi|229455966|gb|EEO61687.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263235239|gb|EEZ20763.1| inner membrane protein oxaA [Bacteroides sp. 3_1_33FAA] Length = 622 Score = 285 bits (730), Expect = 1e-74, Method: Composition-based stats. Identities = 118/612 (19%), Positives = 242/612 (39%), Gaps = 56/612 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE---RKNIQTVKQPNQVDNSYAAVL 57 M+ N V AL +V + Y P EEM + + +IQ + Q + AA Sbjct: 1 MD--KNTLVGFALIGAVVIGFS-IYNRPSQEEMAHAKHYQDSIQAIAQKEAERQAQAATT 57 Query: 58 IDDRA------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A + L+N + + KG + L+ Y+ + Sbjct: 58 QSQNATLHLDSTSMFYGASQGAEQLTTLENNVVKLTFTNKGGRVCAAILKDYN---GQDG 114 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 + L ++ + E NI + ++ +T ++L N Sbjct: 115 KPLMLFDEKDSGMNFAFE----GKNENILTEDMYFQPTNVTDSTVT----MRLAANNGGY 166 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM---RHKPQTATNTFGVQEGFIA 222 I F+ + L + Y+ + T+ N + + R + + F ++ + + Sbjct: 167 IDFDYKL-LPDAYM--VNFTIRANGMQNFFPPALNTVNINWRQRARQLEKGFSFEQRYTS 223 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + Y + K + + + W+ +++++SV I ++ S Sbjct: 224 LTYKPVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTSTPQQEG 283 Query: 283 ARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTI---HHYEKDLAIPRFEMLIDWGW 338 + Y ++A+ T P +T + G F T+ + E L+ GW Sbjct: 284 SGYMKNYTADMTTFFDPTGKQSTNMQFYFGPNHFKTLLNSNDLSLSQKDLELEDLVYLGW 343 Query: 339 FYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + ++ F L G + G+ ++L T+ VK+L +P K Y+S+A M+ ++P Sbjct: 344 PIIRWVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSAKMRVLKPY 403 Query: 396 IDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 I+E+ K+ K+ Q+ + LY + ++P+ GC P+L+Q+PVF A++ + ++E+R Sbjct: 404 INEINAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFFVPNAIELR 463 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ------MKMS 508 + W DL+ D +I +P H+ ++ ++ S++ + + Sbjct: 464 QQS-FLWAPDLSTYD--DIINWGTNIPLLG---NHLSLFCLLFSITNILNTMYTMKQQDM 517 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 G +++ MPV+F+F + + +GL Y+ S +I I+ VI++ E L+ Sbjct: 518 GQQQMPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGIL-TMVILRKTTDEKKLLA 576 Query: 569 RLRSTFSKNYNS 580 L + K Sbjct: 577 MLEARKEKKSQK 588 >gi|212693128|ref|ZP_03301256.1| hypothetical protein BACDOR_02635 [Bacteroides dorei DSM 17855] gi|212664233|gb|EEB24805.1| hypothetical protein BACDOR_02635 [Bacteroides dorei DSM 17855] Length = 622 Score = 285 bits (730), Expect = 1e-74, Method: Composition-based stats. Identities = 118/612 (19%), Positives = 241/612 (39%), Gaps = 56/612 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE---RKNIQTVKQPNQVDNSYAAVL 57 M+ N V AL +V + Y P EEM + +IQ + Q + AA Sbjct: 1 MD--KNTLVGFALIGAVVIGFS-IYNRPSQEEMARAKHYQDSIQAIAQKEAERQAQAATT 57 Query: 58 IDDRA------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A + L+N + + KG + L+ Y+ + Sbjct: 58 QSQNATLHLDSTSMFYGASQGAEQLTTLENNVVKLTFTNKGGRVCAAILKDYN---GQDG 114 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 + L ++ + E NI + ++ +T ++L N Sbjct: 115 KPLMLFDEKDSGMNFAFE----GKNENILTEDMYFQPTNVTDSTVT----MRLAANNGGY 166 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM---RHKPQTATNTFGVQEGFIA 222 I F+ + L + Y+ + T+ N + + R + + F ++ + + Sbjct: 167 IDFDYKL-LPDAYM--VNFTIRANGMQNFFPPALNTVNINWRQRARQLEKGFSFEQRYTS 223 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + Y + K + + + W+ +++++SV I ++ S Sbjct: 224 LTYKPVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTSTPQQEG 283 Query: 283 ARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTI---HHYEKDLAIPRFEMLIDWGW 338 + Y ++A+ T P +T + G F T+ + E L+ GW Sbjct: 284 SGYMKNYTADMTTFFDPTGKQSTNMQFYFGPNHFKTLLNSNDLSLSQKDLELEDLVYLGW 343 Query: 339 FYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + ++ F L G + G+ ++L T+ VK+L +P K Y+S+A M+ ++P Sbjct: 344 PIIRWVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSAKMRVLKPY 403 Query: 396 IDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 I+E+ K+ K+ Q+ + LY + ++P+ GC P+L+Q+PVF A++ + ++E+R Sbjct: 404 INEINAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFFVPNAIELR 463 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ------MKMS 508 + W DL+ D +I +P H+ ++ ++ S++ + + Sbjct: 464 QQS-FLWAPDLSTYD--DIINWGTNIPLLG---NHLSLFCLLFSITNILNTMYTMKQQDM 517 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 G +++ MPV+F+F + + +GL Y+ S +I I+ VI++ E L+ Sbjct: 518 GQQQMPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGIL-TMVILRKTTDEKKLLA 576 Query: 569 RLRSTFSKNYNS 580 L + K Sbjct: 577 MLEARKEKKSQK 588 >gi|260062422|ref|YP_003195502.1| putative inner membrane protein translocase component YidC [Robiginitalea biformata HTCC2501] gi|88783985|gb|EAR15156.1| putative inner membrane protein translocase component YidC [Robiginitalea biformata HTCC2501] Length = 616 Score = 284 bits (728), Expect = 2e-74, Method: Composition-based stats. Identities = 128/629 (20%), Positives = 243/629 (38%), Gaps = 82/629 (13%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP----------- 46 ME N + L I+ W P EE+ +++ + V+ Sbjct: 1 MEEKKLDINSIIGFVLIFGILIYWFYT-NQPTPEEVEAQKQATEQVQDSIRRAEAAAAPQ 59 Query: 47 ---------NQVDNSYAAVLIDDRAQALSMSPRVE----LKNPSLIGSINLKGAQFDDLN 93 + ++S A R A S +P VE L+N L I+ KG + + Sbjct: 60 QAATPAATVPEGNDSLARAAYASRIGAFSYTPAVEGTTLLENDVLSLEISNKGGEIVEAR 119 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 ++ + V+ +S V L+ N A+ T ++ + N+ ++ + Sbjct: 120 MKQF---VNHDSLPVYLVREGN------AQFSLEITTSDNRVLNTRDLFFEPTLSREGEN 170 Query: 154 TPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNS---IDQIRFSPRGRIMRHKPQT 209 + + + E ++ YL S + R +RH P Sbjct: 171 SVLSMKAMAGPRQFLEYRYTIRPGEYLLDFDIRSQGLSLSASKGVPLRWSLRAIRHDPS- 229 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKY----SDIEK----SSISNFHESNSWLGISDKYWAS 261 V+ + Y DI K W+ +++S Sbjct: 230 -------------VMYENRYTRLTYRHEGDDISKLSASGEDDETESEVRWMSFRQHFFSS 276 Query: 262 VFIPSKETSFHSQFKYL----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317 + + + + +FS + G ++ + + G + Sbjct: 277 ILAVDEPLDTVTLTSNDLVEEESSETAFTKEFSIASELPVTGGELSRSMQWYFGPTDIDV 336 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + YE + WG F +I + +F F FGIAI++ T+ V++L P Sbjct: 337 LEQYEDLALADS--IPFGWGIFGWINRYIFTPFYGFLASFLPFGIAIVVMTIIVRILMSP 394 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 + K Y+S A M+ ++P+I E+ EK+K + + Q+A ++LY ++PL+GC P LLQ+ Sbjct: 395 VTYKSYLSQAKMRVLKPEITEINEKYKDNAMKK-QQATMKLYNKAGVSPLSGCIPALLQL 453 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 P+F+A++ S +R + W +DL++ D I L +PFY HV ++PI+ Sbjct: 454 PIFYALFMFFPTSFALRQKS-FLWAEDLSSYD--TIAQLPFSIPFYGD---HVSLFPILA 507 Query: 498 SLSMFIQM------KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 S+++F M +M P I+ P++ +F +++ +GL +Y+ SN+I+I Sbjct: 508 SVAIFFYMMMTTGQQMQTQPGMPNMKFIMYLSPLMMLFFFNNYASGLSLYYFVSNLITIG 567 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 VI + E + +++ K Sbjct: 568 IMLVIKNVILDEEKIHAQIQEQKKKPRKE 596 >gi|237725457|ref|ZP_04555938.1| inner membrane protein oxaA [Bacteroides sp. D4] gi|229436144|gb|EEO46221.1| inner membrane protein oxaA [Bacteroides dorei 5_1_36/D4] Length = 622 Score = 284 bits (727), Expect = 3e-74, Method: Composition-based stats. Identities = 117/612 (19%), Positives = 240/612 (39%), Gaps = 56/612 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE---RKNIQTVKQPNQVDNSYAAVL 57 M+ N V AL +V + Y P EEM + +IQ + Q + A Sbjct: 1 MD--KNTLVGFALIGAVVIGFS-IYNRPSQEEMARAKHYQDSIQAIAQKEAERQAQATTT 57 Query: 58 IDDRA------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A + L+N + + KG + L+ Y+ + Sbjct: 58 QSQNATLHLDSTSMFYGASQGAEQLTTLENNVVKLTFTNKGGRVCAAILKDYN---GQDG 114 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 + L ++ + E NI + ++ +T ++L N Sbjct: 115 KPLMLFDEKDSGMNFAFE----GKNENILTEDMYFQPTNVTDSTVT----MRLAANNGGY 166 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM---RHKPQTATNTFGVQEGFIA 222 I F+ + L + Y+ + T+ N + + R + + F ++ + + Sbjct: 167 IDFDYKL-LPDAYM--VNFTIRANGMQNFFPPALNTVNINWRQRARQLEKGFSFEQRYTS 223 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + Y + K + + + W+ +++++SV I ++ S Sbjct: 224 LTYKPVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTSTPQQEG 283 Query: 283 ARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTI---HHYEKDLAIPRFEMLIDWGW 338 + Y ++A+ T P +T + G F T+ + E L+ GW Sbjct: 284 SGYMKNYTADMTTFFDPTGKQSTNMQFYFGPNHFKTLLNSNDLSLSQKDLELEDLVYLGW 343 Query: 339 FYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + ++ F L G + G+ ++L T+ VK+L +P K Y+S+A M+ ++P Sbjct: 344 PIIRWVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSAKMRVLKPY 403 Query: 396 IDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 I+E+ K+ K+ Q+ + LY + ++P+ GC P+L+Q+PVF A++ + ++E+R Sbjct: 404 INEINAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFFVPNAIELR 463 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ------MKMS 508 + W DL+ D +I +P H+ ++ ++ S++ + + Sbjct: 464 QQS-FLWAPDLSTYD--DIINWGTNIPLLG---NHLSLFCLLFSITNILNTMYTMKQQDM 517 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 G +++ MPV+F+F + + +GL Y+ S +I I+ VI++ E L+ Sbjct: 518 GQQQMPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGIL-TMVILRKTTDEKKLLA 576 Query: 569 RLRSTFSKNYNS 580 L + K Sbjct: 577 MLEARKEKKSQK 588 >gi|315928320|gb|EFV07635.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 500 Score = 283 bits (725), Expect = 4e-74, Method: Composition-based stats. Identities = 132/536 (24%), Positives = 238/536 (44%), Gaps = 63/536 (11%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 + +A+ +S + + F++ P E N +KN Q N + A Sbjct: 9 QQKRILLAVVISFLFFVIYDYFFIPKQPLKIEQNITQKNQQNTSINNTPNIQNATTNTPS 68 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A S ++++ I+ G + L+ + + L+S N+ Sbjct: 69 AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKD-RKYQNEKGEFINLVSKENSPYPL 126 Query: 121 FAEL-DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DEH 177 D + ++P NL + + + +N + + E+ I+ + Sbjct: 127 EMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLT---QNLSGLKIEKDITFYPKGN 183 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y ++ + N ++P A +++ V G + + +++ K D+ Sbjct: 184 YEIEVKLSKNAN---------YFISPGYRPNIAVDSYTVH-GALVMDNKETIETYKDGDV 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 EK +N S D+Y+A+ F Y D AN+ I+ Sbjct: 234 EKDESANNVVMTS--AF-DRYYAT-------------FFYNFDKPLNVAISKDANQNPIV 277 Query: 298 PGKS-ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 S + G+KE + + PR E ++++GWF FIAKPMF +++ + Sbjct: 278 FAYSDNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHQY 332 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GN+G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K P Q + M+ Sbjct: 333 IGNWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDP-QKMNMHMM 391 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP I Sbjct: 392 ELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFIL-- 449 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 PI+M +MF+Q ++P D QA I+ ++PV+F F+L Sbjct: 450 -----------------PILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFSL 488 >gi|281423172|ref|ZP_06254085.1| inner membrane protein OxaA [Prevotella oris F0302] gi|281402508|gb|EFB33339.1| inner membrane protein OxaA [Prevotella oris F0302] Length = 644 Score = 283 bits (725), Expect = 4e-74, Method: Composition-based stats. Identities = 130/622 (20%), Positives = 256/622 (41%), Gaps = 59/622 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------------RKNIQTVKQPNQ 48 M+ N + L +++ + +Y P EE + T + + Sbjct: 1 MD--KNNIIGFLLIAVVLIGFS-WYNRPSAEEQRAAFVKDSIEHVNKSQSLKATQQAEKR 57 Query: 49 VDNSYAAVLIDDRAQAL-----SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH----- 98 + ++DD + ++ LKN + ++N KGA + ++GY Sbjct: 58 KQQAERQKVLDDTTSLFHKTLTGNAEQIVLKNKKVELTLNTKGATVEKAVIKGYVGHNLK 117 Query: 99 -LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 D S++ V L + ++ +Y A+ ++T++ +P+ T + Sbjct: 118 VKDGSADQNDVILFNGADQSLSYMLSAKETNINTSDLYFVPSQVTDSTVTFTANAGEGKT 177 Query: 156 IKLVFKNANNILFERTISLDE-HYLFK-IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + L + + + +S LF T+ N D++R RG ++ AT T Sbjct: 178 LTLKYVLGKDYMLHMQLSAQGMSGLFSPGTQTMDVNWKDKVRQQERGFTFENR--YATLT 235 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + EG L + E IE W+ ++++++V I + ++ Sbjct: 236 YHKSEGGTDYLNEGK--EITDEAIEDK--------IDWIAFKNQFFSAVMIAKNDFKSNA 285 Query: 274 QFKYL-SDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKD---LAIP 328 + + + Y ++ A T P + + G +F + E++ Sbjct: 286 LMTSIPQEKGSGYLKQYEAKMKTFFDPTGRQASEFDFYYGPNDFRLLQKMERECHFAKDL 345 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVS 385 + + L+ GW F + + F L G N GI ++L T+ +KLL +P+ KK Y+S Sbjct: 346 QMQRLVYLGWPLFRIINRWFTLYVFDFLTGMNINMGIVLILITLLLKLLTYPMVKKSYMS 405 Query: 386 TANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +A M+ ++PK+DE ++F + Q+ Q+AM+ Y + ++PL+GC P+L+Q P++ A++ Sbjct: 406 SAKMRVLKPKLDEATKQFNKPEDQMQKQQAMMSEYAKYGVSPLSGCLPMLIQAPIWIAMF 465 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSL 499 + ++++R + WIKDL+ DP NI+ + L F + +M++ Sbjct: 466 NFVPNAIQLRGES-FLWIKDLSTFDPIWEWNHNIWLIGDHLSLTCILFCVANVLYTVMTM 524 Query: 500 SMFI-QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 QM K ++ MPV+F F + + AGL Y+ S S + K Sbjct: 525 RQQKDQMVGQQADQMKMMQWMMFLMPVMFFFMFNDYSAGLNFYYFVSLFFSAAIMWALRK 584 Query: 559 MHGAEIGLIDRLRSTFSKNYNS 580 E L+ L + +N + Sbjct: 585 TTNDE-KLLAILEQRYQENKAN 605 >gi|254457731|ref|ZP_05071159.1| 60 kDa inner membrane insertion protein [Campylobacterales bacterium GD 1] gi|207086523|gb|EDZ63807.1| 60 kDa inner membrane insertion protein [Campylobacterales bacterium GD 1] Length = 541 Score = 283 bits (725), Expect = 4e-74, Method: Composition-based stats. Identities = 138/567 (24%), Positives = 241/567 (42%), Gaps = 74/567 (13%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 +A+A+SVI A+ + E + +K Q + D S ++ S+ Sbjct: 1 MLAVAMSVIFFVAYTAIFPPAEPENLAANKKVEQVKNVGSNQDASLQVSSNLEQTTGHSI 60 Query: 68 SP-----------RVELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPS 114 S + + N I ++ G + L + ++ ++ PS Sbjct: 61 SEVEKYGSSDANTILTVTNKDFILKVDTLG-RISSKELLQDKFKTKEDKHAQLI----PS 115 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTIS 173 F + ++ ++ I TP K+ ++++ + ++ Sbjct: 116 TGMKPLFIRF----LDEILNNESTRVAYSASINNIALDGTPQKVTLTQKLSSLVVTKELT 171 Query: 174 L--DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 D HY KI S D+ F G+ R K V G + D+ + Sbjct: 172 FYADGHYDAKIS-----LSQDKRYFIYLGQ--RPKVNETEQMMTV-TGAMVYTDDELVTI 223 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D E + E S D+Y A++ + + + D Y Sbjct: 224 VEDGDAEGRKTFSGVELIS--AF-DQYSATMMYGFPKEANIIIERDRDDNPVLY------ 274 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + T + G KE+ + + P I++GWF F +KP+F L+S Sbjct: 275 ------FDATQNMTFNGYVGQKEYKVLKNIN-----PVLTNAIEYGWFTFASKPLFQLLS 323 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + + GN+G +I+ T+ ++ + +PL K +S MK+I PKI EL+ K+K P Q + Sbjct: 324 WLHGIFGNWGWSIIALTIMIRAVLYPLTYKGMMSMQRMKDISPKIKELQAKYKSDP-QRM 382 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 A++ +YK HN NPL GC P++LQIPVFFAIY+V+ ++E++ AP+ W+ DL+ D Sbjct: 383 NAAVMDMYKKHNANPLGGCLPMILQIPVFFAIYRVLLNAVELQGAPWMLWVTDLSRMDDY 442 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 I PI+M SMF Q +++P D Q + ++PV+F F Sbjct: 443 YIL-------------------PILMGASMFYQQRLTPNNFTDPMQEKVFKYLPVIFTFF 483 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIM 557 +FP+GL++YW +N+ SI QQ ++ Sbjct: 484 FLTFPSGLVLYWFVNNLFSIGQQFIVN 510 >gi|150005858|ref|YP_001300602.1| putative inner membrane protein translocase component YidC [Bacteroides vulgatus ATCC 8482] gi|254881961|ref|ZP_05254671.1| inner membrane protein oxaA [Bacteroides sp. 4_3_47FAA] gi|294775570|ref|ZP_06741080.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides vulgatus PC510] gi|319641034|ref|ZP_07995739.1| inner membrane protein oxaA [Bacteroides sp. 3_1_40A] gi|166975850|sp|A6L5L6|OXAA_BACV8 RecName: Full=Inner membrane protein oxaA gi|149934282|gb|ABR40980.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|254834754|gb|EET15063.1| inner membrane protein oxaA [Bacteroides sp. 4_3_47FAA] gi|294450620|gb|EFG19110.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides vulgatus PC510] gi|317387344|gb|EFV68218.1| inner membrane protein oxaA [Bacteroides sp. 3_1_40A] Length = 621 Score = 283 bits (725), Expect = 5e-74, Method: Composition-based stats. Identities = 118/612 (19%), Positives = 239/612 (39%), Gaps = 56/612 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE---RKNIQTVKQPNQVDNSYAAVL 57 M+ N V AL +V + Y P EEM + +IQ + Q + AA Sbjct: 1 MD--KNTLVGFALIGAVVIGFS-IYNRPSQEEMARAKHYQDSIQAIAQKEAERLAQAATA 57 Query: 58 IDDRA------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A L+N + + KG + L+ Y+ + Sbjct: 58 QSQNATLHLDSTSMFYGANQGTEQLTTLENNVVKLTFTNKGGRVCAAILKDYN---GQDG 114 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 + L ++ + E NI + ++ +T ++L N Sbjct: 115 KPLMLFDEKDSGMNFAFE----GKNENILTEDMYFQPTNVTDSTVT----MRLAANNGGY 166 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM---RHKPQTATNTFGVQEGFIA 222 I F+ + L + Y+ + T+ N + + R + + F ++ + + Sbjct: 167 IDFDYKL-LPDAYM--VNFTIRANGMQNFFPPALNTVNINWRQRARQLEKGFSFEQRYTS 223 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + Y + K + + + W+ +++++SV I ++ S Sbjct: 224 LTYKPVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTSTPQQEG 283 Query: 283 ARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTI---HHYEKDLAIPRFEMLIDWGW 338 + Y ++A+ T P T + G F T+ + E L+ GW Sbjct: 284 SGYMKNYTADMTTFFDPTGKQPTDMQFYFGPNHFKTLLNSNDLSLSQKDLELEDLVYLGW 343 Query: 339 FYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + ++ F L G + G+ ++L T+ VK+L +P K Y+S+A M+ ++P Sbjct: 344 PIIRWVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSAKMRVLKPY 403 Query: 396 IDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 I+E+ K+ K+ Q+ + LY + ++P+ GC P+L+Q+PVF A++ + ++E+R Sbjct: 404 INEINAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFFVPNAIELR 463 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ------MKMS 508 + W DL+ D +I +P H+ ++ ++ S++ + + Sbjct: 464 QQS-FLWAPDLSTYD--DIINWGTNIPLLG---NHLSLFCLLFSITNILNTMYTMKQQDM 517 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 G +++ MPV+F+F + + +GL Y+ S +I I+ VI++ E L+ Sbjct: 518 GQQQMPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGIL-TMVILRKTTDEKKLLA 576 Query: 569 RLRSTFSKNYNS 580 L + K Sbjct: 577 MLEARKEKKSQK 588 >gi|325969856|ref|YP_004246047.1| membrane protein oxaA [Spirochaeta sp. Buddy] gi|324025094|gb|ADY11853.1| Membrane protein oxaA [Spirochaeta sp. Buddy] Length = 604 Score = 283 bits (725), Expect = 5e-74, Method: Composition-based stats. Identities = 135/604 (22%), Positives = 241/604 (39%), Gaps = 62/604 (10%) Query: 1 MERNWNYFVAIALSVIIV---YAWQNFYVYPRI-------------EEMNNERKNIQTVK 44 M+ N +AI LSV+++ Q + P + Q + Sbjct: 1 MD--KNTILAIVLSVLVITVGMTIQTTFFAPDPVVQSSQQEVQQASTPSATTLEPAQYSQ 58 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 P+ + + S I N GA L+ + + Sbjct: 59 IPSNMAWNSKLPGSLVSVGNQGSSTPFTFSTEYFIIEFNPNGASVSSFKLKEH---LDDG 115 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-- 162 P+ L N+ +A+ + + ++N + + K++ L Sbjct: 116 EPVELLFKSQNSNDAFL----LYAGKDKANPIDANFRYQISGNKVIFTQEFALLSEDGKS 171 Query: 163 -ANNILFERTISLD-EHYLFKIVDTVTN--NSIDQIRFSPRGRIMRHKPQTAT------N 212 ++ +T + + YLF+I N N + F + +PQ N Sbjct: 172 VGDSFSLTKTYTFGAKDYLFQIDVDTKNSVNKAVPLSFENSAYTLAFEPQIGPSFAKLDN 231 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + +I G + K S + + SW+ + KY++ + IP T++ Sbjct: 232 NYNYRRFYIKEDGSSKKNQVKLS----NGAYTTTKPLSWVALVGKYFSLIAIPDA-TNYT 286 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK------DLA 326 S+ Q+ I S T T +AG + + Y+ +A Sbjct: 287 VSLSETSEEGLPLQSSIYITRPAIRSA-SQTDTFRFYAGPQLKGDMTIYDDASSNSFGVA 345 Query: 327 IPRFEMLIDWG-WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 + E +D W ++ + +++ Y ++ N+G+ I++ T +KL+ +P++KK S Sbjct: 346 NLQLEQALDSSSWLGWLETILKTILNLLYKVIPNYGVGIIILTFLLKLVLYPISKKGMES 405 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 TA M ++ PK+ E++EK+ +P + + M LYK INP+ GC P+LLQ P+ A Y Sbjct: 406 TAKMSSLSPKMAEIKEKYPDNPTK-QNEEMATLYKKEKINPMGGCLPMLLQFPILIAFYG 464 Query: 446 VISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 +++ E+R A F GWI DL+ D +FT LPF + + PI+ ++SM Sbjct: 465 LLNKHFELRGAMFIPGWIPDLSMPD--TVFTFGFNLPFLG---NQLHLLPIVYTVSMIYS 519 Query: 505 MKMSPPP-----ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 MK++ + MP++F F L + P+GLI+YWS N +SI QQ K Sbjct: 520 MKITQNASTAGSQQGMMKFMTYGMPLMFFFVLYNAPSGLILYWSVMNALSIFQQLYTNKK 579 Query: 560 HGAE 563 E Sbjct: 580 KSKE 583 >gi|194337886|ref|YP_002019680.1| 60 kDa inner membrane insertion protein [Pelodictyon phaeoclathratiforme BU-1] gi|254773008|sp|B4SHH0|OXAA_PELPB RecName: Full=Inner membrane protein oxaA gi|194310363|gb|ACF45063.1| 60 kDa inner membrane insertion protein [Pelodictyon phaeoclathratiforme BU-1] Length = 583 Score = 283 bits (723), Expect = 7e-74, Method: Composition-based stats. Identities = 118/583 (20%), Positives = 247/583 (42%), Gaps = 47/583 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+RN +AI +I+ W F + + ++ +TV Q + + + D+ Sbjct: 1 MDRNSVTGLAII--AVIMIVWLQFMSPEKKPLLPSKTVKTETVVQSDVQVPAVSIPAADN 58 Query: 61 ----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS-PIVTLLSPSN 115 + + ++++N +++ KGA L L+ + + N P + + N Sbjct: 59 FGVFASSSGGQEKLLKVENDLFRATLSSKGATLKSLVLKKH---LDGNRLPFDLVSNGKN 115 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + + +L SN + + + ++ A + Sbjct: 116 GALSLLFLTREGKKIDTRDLYFSNVTLDTLRTIKGKESYAVRYHLDVAPQQAIDIIFGFT 175 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIM---------RHKPQTATNTFGVQEGFIAVLG 225 + Y K+ V ++ +++P A + + Sbjct: 176 GDSY--KVDYDVKLTGFASELAGNEYQVQWDGGVPFSEKNRPDEAQSA------LASAYL 227 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 SLV+ S ++S W+ + +KY+ + IP +++ G+ + Sbjct: 228 GGSLVKLDASKEKQSYREEQSGEAQWVAVRNKYFVAALIPHGKSAGIYLDGKRETGND-F 286 Query: 286 QAKFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY---- 340 ++ +A +I + + F L+ G ++ + + E ++D+GW + Sbjct: 287 ESYLAALKIAVPSTAGVVDDKFSLYLGPLDYNIVKAQK-----VGLEKIMDFGWDWLTRP 341 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F + + S+ V N+G+ I++ +KL+ +PL+ S M +QP + EL+ Sbjct: 342 FAEFIILPVFSWMNGFVSNYGLIIIIFAFLIKLVTYPLSMASTKSMKKMSALQPALKELQ 401 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K +P + LQ + ++YK +NP+ GC P++LQ+P+ FA++ V S+E+R + Sbjct: 402 EKYKDNPAK-LQSELGRIYKEAGVNPIGGCLPVVLQMPLLFAMFYVFRSSIELRQHS-FL 459 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-I 519 W KDL+ D +IF +P Y H+ ++PI+M++++++Q K++P Q + Sbjct: 460 WAKDLSVPD--SIFDFGFAIPMYGS---HIAVFPILMAVTVYLQQKITPTTQSNEQMKVM 514 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + P + + ++ PAGL +Y+ N+ S+ QQ I K A Sbjct: 515 MYMFPAMMLLFFNNMPAGLGLYYLMFNIFSVAQQFYINKTTTA 557 >gi|315608951|ref|ZP_07883923.1| inner membrane protein OxaA [Prevotella buccae ATCC 33574] gi|315249331|gb|EFU29348.1| inner membrane protein OxaA [Prevotella buccae ATCC 33574] Length = 632 Score = 283 bits (723), Expect = 7e-74, Method: Composition-based stats. Identities = 123/622 (19%), Positives = 260/622 (41%), Gaps = 60/622 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-------RKNIQTVKQPNQVDNSY 53 M+ N + + L +++ + +Y P EE + + +++ + D + Sbjct: 1 MD--KNTIIGMVLIAALLFGYS-WYSQPSAEEQRAAFVQDSIAQAKKRELEKAQKADAAA 57 Query: 54 AAVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYH----- 98 +A A + + RV LKN + ++N KGA + ++ Y Sbjct: 58 RKQTEQQQAAADTTALFHAAMQGEEQRVVLKNNKVELTLNSKGATVERAVVKNYVGHDIN 117 Query: 99 -LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 D S + VTL + + A+ ++TA+ P++ T + Sbjct: 118 VKDGSKDRKDVTLFEGKDQSLKFMLAAKEANINTADLYFTPSAQTDSTVTFTASAGAGRS 177 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVD--TVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + L + + L +S++ D T+ N D+++ RG ++ AT T Sbjct: 178 LSLKYTLGRDYLLHMQLSVEGMGGLFAPDMKTLDINWQDRVKQQERGFTFENR--YATLT 235 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + G L + S + ES W+ ++++++V I + ++ Sbjct: 236 YHETAGGTDYLSETS----------EKVDEPCKESIDWVAFKNQFFSAVMIVKDDFQKNA 285 Query: 274 QFKYL-SDGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR-- 329 + + + Y ++ A T P + + G +F + E + + Sbjct: 286 LLTSIPQEKGSGYLKQYQARLKTAFDPNGRQPSEFEFYFGPNDFRLLQKVEHESRFGKSL 345 Query: 330 -FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVS 385 E L+ GW F F + F + + N+ GI ++L T+ +K+L +P+ KK Y+S Sbjct: 346 EMERLVYLGWPLFRWINRFFTIYVF-DFLRNYFPMGIVLILITLLLKVLTYPMVKKSYMS 404 Query: 386 TANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +A M+ ++PK++E +++ + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ Sbjct: 405 SAKMRVLKPKLEEATKQYDKPEDQMQKQQAMMAEYSKYGVSPLSGCLPMLIQMPIWIAMF 464 Query: 445 KVISISLEMRHAPFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 + ++++R + W+KDL+ DP N++ + L F + M++ Sbjct: 465 NFVPNAIQLRGQS-FLWMKDLSTFDPLFEWNHNLWLIGDHLSLTCILFCVAQVLYSWMTM 523 Query: 500 SMFI-QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 QM K ++ MP++F F + + +GL Y+ S S + K Sbjct: 524 RQQRDQMVGQQAEQMKMMQWMMYLMPLMFFFMFNDYSSGLNFYYFVSLFFSAAIMWTLRK 583 Query: 559 MHGAEIGLIDRLRSTFSKNYNS 580 + L++ L + + +N N+ Sbjct: 584 TTNDK-KLLEILEARYRENKNN 604 >gi|298208263|ref|YP_003716442.1| putative inner membrane protein translocase component YidC [Croceibacter atlanticus HTCC2559] gi|83848184|gb|EAP86054.1| putative inner membrane protein translocase component YidC [Croceibacter atlanticus HTCC2559] Length = 622 Score = 283 bits (723), Expect = 8e-74, Method: Composition-based stats. Identities = 123/628 (19%), Positives = 251/628 (39%), Gaps = 78/628 (12%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME N + L I+ W + P EE+ E+ + V++ N+ + Sbjct: 1 MENKKFDLNSLIGFILIGGILI-WMLYRNAPTEEEL-QEKATTEQVEKANETNEVATPTT 58 Query: 58 IDDRAQALSMSPRV------------------------ELKNPSLIGSINLKGAQFDDLN 93 +D A + + + +N L + KG Q + Sbjct: 59 VDSTQVATTETDSIKQARANAQLGSFGYSNQYDNGTVTTFENDVLFLKVANKGGQIVEAK 118 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 ++ + +S V L+ +N + T N L T+ ++L+ Sbjct: 119 MKNFKT---YDSIPVHLIKDNNASFNINFKTSDNRTLNTENLAFEPTLSKSGDNQVLS-- 173 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIV------DTVTNNSIDQIRFSPRGRIMRHKP 207 +KL N+ + + + Y+ + V N S + ++ ++ Sbjct: 174 --MKLKVSNSEYLEYRYELK-PGEYMLDFSINSKGLENVLNTSEAAV---LNWKLKGYRH 227 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI--- 264 + + I D D + ++ ++ S+ + Sbjct: 228 AKSISYENRYTEAIYEYEDGKDDYLGQQDFTDDEEEDVT----YVAFKQHFFTSILLTDT 283 Query: 265 PSKETSFHSQ-FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 P K F S+ D Y +F+A G I + G ++ ++ Y++ Sbjct: 284 PFKTGKFTSKNLVEDEDIDTVYTKEFTAQFPLETKGGEIDYNMNWYYGPSDYKILNDYDR 343 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG----NFGIAIMLTTVFVKLLFFPLA 379 +L + +I GW F ++ + +F + ++G+AI++ T+ V+++ P+ Sbjct: 344 NL-----DEVIPLGWGIFGWINRYVFIPFFAFITSFGVVSYGVAIIIMTIVVRIVLSPVT 398 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K Y+S A MK ++P+I+EL EK+K +P + Q+ ++LY +P++GC P L+Q+PV Sbjct: 399 YKSYLSQAKMKVLKPEINELNEKYKDNPMKK-QQETMKLYSKAGASPMSGCLPALMQLPV 457 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F+A+++ + ++R + W DL++ D I L +PFY HV ++PI+ S+ Sbjct: 458 FYALFQFFPSAFQLRQKS-FLWADDLSSYD--TIAELPFSIPFYGD---HVSLFPILASV 511 Query: 500 SMFIQMKM--------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++F M M + P I+ P++ +F +++ +GL +Y+ SN+I+I Sbjct: 512 AIFFYMTMTTGQTMQQNSQPGMPNMKFIMYLSPLLMLFFFNNYASGLSLYYFISNLITIG 571 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 VI + E + ++ + K Sbjct: 572 IMLVIKNVIIDEDKIHAKIEANKKKPKK 599 >gi|152993157|ref|YP_001358878.1| inner membrane protein translocase component YidC [Sulfurovum sp. NBC37-1] gi|151425018|dbj|BAF72521.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 539 Score = 282 bits (722), Expect = 9e-74, Method: Composition-based stats. Identities = 135/581 (23%), Positives = 242/581 (41%), Gaps = 81/581 (13%) Query: 1 MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME+ N +A+ALS + + + P +++ +NI + P V Sbjct: 1 MEQQDLNKRLLLALALSFFVFVGYSYLF--PPQKQVAQTEQNISNTQTPKAVTTQSTPKS 58 Query: 58 ID------DRAQALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPI 107 A + S +V + + + +I+ G + L Y N Sbjct: 59 TPVNMDKAQNAPKNTASEKVLATVTSNTFKITIDEFG-RIAQYELLEAKYKDAEGHN--- 114 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNANN 165 L T E+ + N E T + L + + I ++ + + Sbjct: 115 ---LQILGTNEVKPLEVRFSDAKINDE--AFKTPYTLDGSASVDVSSNAQILILTQKLSA 169 Query: 166 ILFERTISL--DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + + I++ D Y + + +P H+P ++ + + G + Sbjct: 170 LTVTKKITIKPDGSYDIDVTTS---------APAPYFITPGHRPMADSSRYMLVRGALVE 220 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 D + D K + + + AS F + + F G Sbjct: 221 GADGVITTIPDGD-AKGTETFKNAKI----------ASAF----DRYVATMFYDFKKGMN 265 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 K ++ I + G KE+ + + P I++GWF F++ Sbjct: 266 VSILKVGNDDPLIFVEGGQNLHLGGYIGPKEYNILKNIN-----PELTNTIEFGWFTFLS 320 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP F ++ + + L+GN+G AI+L T+ VKL FPL+ K +S +K++ PK+ +L+ K+ Sbjct: 321 KPFFKVLLWIHGLIGNWGWAIILFTLLVKLTLFPLSYKGMMSMQKLKDLAPKMKDLKAKY 380 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWI 462 K P + L M++LYK + NP+ GC P++LQIPVFFA+Y+V+ + E++ A + GWI Sbjct: 381 KGDPAK-LNAQMMELYKKNGANPMGGCLPMILQIPVFFALYRVLLNADELQGAAWIPGWI 439 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521 +LA ADP + P++M +SM+ Q +++P D Q I Sbjct: 440 NNLAVADPYYVL-------------------PVLMGISMWFQQRITPNNFTDPLQEKIFK 480 Query: 522 WMPVVF--VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 W PV+ +F + FP+GL++YW +N +I QQ VI + + Sbjct: 481 WFPVLMAGMFIIMPFPSGLVLYWVVNNTFTIGQQYVINRAY 521 >gi|256840550|ref|ZP_05546058.1| inner membrane protein oxaA [Parabacteroides sp. D13] gi|262381171|ref|ZP_06074309.1| inner membrane protein oxaA [Bacteroides sp. 2_1_33B] gi|256737822|gb|EEU51148.1| inner membrane protein oxaA [Parabacteroides sp. D13] gi|262296348|gb|EEY84278.1| inner membrane protein oxaA [Bacteroides sp. 2_1_33B] Length = 633 Score = 282 bits (722), Expect = 1e-73, Method: Composition-based stats. Identities = 133/635 (20%), Positives = 260/635 (40%), Gaps = 93/635 (14%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------------RKNIQTVKQPNQ 48 M+ N + L ++++A+ ++ P E++ + + ++ KQ N+ Sbjct: 1 MD--KNTLIGFLLIGVVLFAFS-WFNRPTPEQLEAQRRYQDSIAKIEYAQQLELQKQENK 57 Query: 49 ---VDNSYAAVLIDDRAQALSMSPRV------------ELKNPSLIGSINLKGAQFDDLN 93 V++S V RAQ L S V L+N + I+ KG + Sbjct: 58 SALVEDSLENVPDSVRAQRLQQSFGVFGEAMVGTEDYTTLQNNLVELRISNKGGRICYAR 117 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ Y D ++ P+V L + + + TA N + + + + G Sbjct: 118 LKEY--DTYNDEPLV-LFDEKESNFNF-----TLVTATNRVVNTGDLYFTPVKGN---DP 166 Query: 154 TPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNS----------------IDQIRF 196 + + + T +L + Y+ + + IR Sbjct: 167 NSVIMRLNTGEGSHLDFTYTLKPDDYM--VQYQILGTGLNGVLAPSTNALDLLWEQDIRQ 224 Query: 197 SPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISD 256 +GR + T F D + + SD W+G D Sbjct: 225 QEKGRKFEDRYVTLNYKFMA--------DDVEHLSESKSD-----SKQIPNRLKWIGYKD 271 Query: 257 KYWASVFIPSKETSFHSQ-FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315 ++++V I + + K + +G Q K + + L GK T +F + G +F Sbjct: 272 MFFSTVLISQEGFEATTLDSKAIPEGDVLKQFKTTTSVPFDLQGKEATNLSF-YFGPNKF 330 Query: 316 PTIHHYEKDLAIPR---FEMLIDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTV 369 + ++K + + E L+ GW F + ++ + + N+GI I+L T+ Sbjct: 331 ALLKSFDKGVVAEQQLDLEKLVPLGWGIFRWVNQYFVIPLFDFLGKFIHNYGILILLMTI 390 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLA 428 VK++ FPL K Y+S+A M+ ++P+++E+ K+ Q QKA ++LY +P++ Sbjct: 391 IVKIILFPLTYKSYMSSAKMRVLRPQVEEINAKYPGQDKAMERQKATMELYSRAGASPMS 450 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF- 487 GC P+LLQ+P+ A++ ++E+RH + W DL+ D IF+ +P P F Sbjct: 451 GCLPMLLQMPILIALFMFFPSAIELRHQS-FLWAHDLSTYD--AIFSWNKYIPIITPYFG 507 Query: 488 MHVGIWPIIMSLSMFIQMKMSP------PPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 H+ ++ ++M+++ K + G ++ MP++F+ + + +GL Y Sbjct: 508 NHISLFCLLMTITNIFYTKYNMEMTNTGQQQMPGMKAMMYMMPLMFLVFFNQYASGLTYY 567 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + S +I+IVQ +I + E L+ +L + K Sbjct: 568 YFISTLITIVQT-LIFRYTINEDKLLAKLEANKRK 601 >gi|297171723|gb|ADI22715.1| preprotein translocase subunit YidC [uncultured verrucomicrobium HF0500_27H16] Length = 653 Score = 282 bits (721), Expect = 1e-73, Method: Composition-based stats. Identities = 121/442 (27%), Positives = 214/442 (48%), Gaps = 34/442 (7%) Query: 151 TPTTPIKLVFKNANN-ILFERTISLDEHYLFKIVDT--VTNNSIDQIRF--SPRGRIMRH 205 T T + F+ + ++ R L + FKI T + N I +I + Sbjct: 211 TDETENSITFRAQHGDLIITRRYELAKG-TFKIRHTTTLQNTGIQKIDLGSQVFYGLGTS 269 Query: 206 KPQTAT-----NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS--WLGISDKY 258 P + G G G + K ++K S + W+ + +++ Sbjct: 270 LPTVSDTRKEFQNVGYFSGQRGWTGRRKPPIFKLQKMQKQGGSMMENAGGIHWVAVRNQF 329 Query: 259 WASVFIPSKETSFHSQFKYLS------DGHARYQA--KFSANEITILPGKSITTTNFLFA 310 +A P K T+ + K G + Y +F N + PG+S+T L+A Sbjct: 330 FAVSLAPDKPTTGVVKGKVFDLGTLDHRGESEYGVHGQFGLNTDMLTPGQSLTHEFNLYA 389 Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 G KE + + K + ++++ +G+F +K + MLM + V N+G AI++ T+ Sbjct: 390 GPKELKRLSNLSKA-GMKHQDLVMQFGFFGLFSKLLLMLMQMLHGFVHNWGWAIIIMTIL 448 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 +KLLF+PL K S M+ IQP + E++ K+K PQ +Q+ + +L++ + +NP AGC Sbjct: 449 IKLLFWPLTAKSASSMKRMQTIQPLMKEIQAKYK-DKPQKMQQEVAKLFRENKVNPAAGC 507 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 PIL+Q+P+F ++ ++ + E+R A + W+ DL+ P +F +P F Sbjct: 508 LPILIQMPIFLGLFFMLRSAAELRFA-EFFWVSDLSQ--PERMFHWGVQIPILGEYF--- 561 Query: 491 GIWPIIMSLSMFIQMKMSPPP-----ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + PI+M ++MF QM+M+P P K QA + ++P +F+F L F +GL++YW+ Sbjct: 562 NLLPILMGITMFYQMRMTPIPPGADDMQKMQAKMFRFLPFIFLFMLYGFSSGLVLYWTVQ 621 Query: 546 NVISIVQQAVIMKMHGAEIGLI 567 N++SIVQQ + K E ++ Sbjct: 622 NILSIVQQTITNKRKDTEPVVL 643 >gi|86160773|ref|YP_467558.1| protein translocase subunit yidC [Anaeromyxobacter dehalogenans 2CP-C] gi|123750290|sp|Q2IHR0|OXAA_ANADE RecName: Full=Inner membrane protein oxaA gi|85777284|gb|ABC84121.1| protein translocase subunit yidC [Anaeromyxobacter dehalogenans 2CP-C] Length = 545 Score = 282 bits (721), Expect = 1e-73, Method: Composition-based stats. Identities = 130/573 (22%), Positives = 230/573 (40%), Gaps = 48/573 (8%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N +A LSV I+ WQ + + AA Sbjct: 4 DNRRILLATVLSVGILILWQVIFPKKTPPKPAPTPAAEVAKPAAPAAPAPGAAAPAVPAP 63 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNL-----RGYHLDVSSNSPIVTLLSPSNTK 117 + V+L ++ G L L R D +V + + Sbjct: 64 PPDAPEETVKLAGKGFEATLTTYGGALKSLQLEGDKFRKQEKDREVQIDLVHVTAGQPYP 123 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 + A + A+ P + +++ + T ++ N+ +T + Sbjct: 124 LSLSASPELGGAADVTADPGARAPMRIVAKDASSVTFEGRV-----GNLAARKTFRVTGK 178 Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y + +T + + M ++ G F+ + +++ Sbjct: 179 PYELALDVELTGGAGNGTVGVLYPAFMPPDTKSGGIFSGPPLDFVRPVCRAGTTTERFDL 238 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 ++ + SW G+ Y+ + +P++ + + G A Sbjct: 239 AKEGAPEKLEGQVSWAGVDQHYFVAAVLPAEPVGTCTFARGPVKGAG------VAALAIP 292 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG----WFYFIAKPMFMLMSY 352 + G + + ++AG K+ T+ Y + FE ID+G +F A+ + +M + Sbjct: 293 VEGGARKLSLTVYAGPKDLDTLRGYGR-----GFESAIDYGAVAKFFALFARGLLYVMRW 347 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +V N+G+AI+L TV V+L+ FPL K S M+ +QP+I++L+ KF + + Sbjct: 348 LEAIVRNWGVAIILLTVLVRLVLFPLTYKSMQSMNEMRKLQPEIEKLKAKFGDD-REKMN 406 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 A++QLY+ H +NPL GC P+LLQ+PV+FA+Y + S+E+ P + W+KDL A DP Sbjct: 407 LAVMQLYQKHKVNPLGGCLPMLLQMPVWFALYAALQTSVELYREP-FLWMKDLTAHDPYF 465 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMPVVFVFAL 531 I PI M +S F+ K+SP PAD QA ++ + P F + Sbjct: 466 IL-------------------PIAMGISSFVMQKLSPQPADNAQAKMMLYFFPGFFTVIM 506 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P GL +Y +N++SIVQQ ++MK A Sbjct: 507 LFVPGGLTLYIFVNNLLSIVQQQLMMKHQRAAP 539 >gi|288927879|ref|ZP_06421726.1| inner membrane protein OxaA [Prevotella sp. oral taxon 317 str. F0108] gi|288330713|gb|EFC69297.1| inner membrane protein OxaA [Prevotella sp. oral taxon 317 str. F0108] Length = 627 Score = 282 bits (721), Expect = 1e-73, Method: Composition-based stats. Identities = 127/624 (20%), Positives = 244/624 (39%), Gaps = 76/624 (12%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY---------- 53 N N + L +++ + + P EE+ +++ K+ + Sbjct: 2 NKNNLIGFILIGLVLIGFSLW-NRPSEEELAKQQQKELIEKKNKEEQTKAKAKADAARAQ 60 Query: 54 --AAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 D A + + + LKN L +N KG D + + + + Sbjct: 61 ALEQATTDTAALFHKALIGEAKPIVLKNSKLTLQLNTKGGVVDKVIISNF--TDRNGHKD 118 Query: 108 VTLLSPSNTKNAYFAEL--DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 +TL + Y YVSTA+ P+ T T + + A Sbjct: 119 LTLFQGKDQSLNYTFSTKDGYVSTADLFFTPSEVT------------DTTVTFTAEAAAG 166 Query: 166 ILFERTISLDEHYLFKI--------------VDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 LD Y+ V+TV N ++ +G ++ A+ Sbjct: 167 KTLTIKYVLDNEYMLHTSISATGMGGILNPSVNTVDINWQERCAQQEKGFTFENR--YAS 224 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 T+ EG L + S +K ++ + W+ ++++++V I + Sbjct: 225 LTYHKTEGGTDYLSESS---EKIDEV-------IEDKIDWVAFKNQFFSAVMIAKTDFGT 274 Query: 272 HSQFKYL-SDGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 ++ + + + Y ++ A T P S T + G +F + E + Sbjct: 275 NATLTSIPQEKGSGYLKQYQAKLKTAFDPTGSQPTQLDFYYGPNDFRLLQKMESKSHFGK 334 Query: 330 ---FEMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQY 383 E L+ GW F + + F L G N G+ ++L T+ +K + FPL KK Y Sbjct: 335 DLELERLVYLGWPLFRIINRWFTLYVFDWLTGLNINMGVVLILITLLLKFITFPLVKKSY 394 Query: 384 VSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 +S+A M+ ++PK++E ++F K Q+AM+ Y + ++PL+GC P+L+Q+P++ A Sbjct: 395 LSSAKMRVLKPKLEEATKEFNKPEDQMKKQQAMMSEYAKYGVSPLSGCLPMLIQMPIWIA 454 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIM 497 ++ + ++++R + WIKDL+ DP NI+ + L F + +M Sbjct: 455 MFNFVPNAIQLRGES-FLWIKDLSTYDPVLEWGHNIWLIGDHLSLTCILFCLSNVLYSMM 513 Query: 498 SLSMFI-QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ QM K ++ MPV+F F + + +GL Y+ S S ++ Sbjct: 514 TMRQQRDQMVGQQAEQMKMMQWMMYLMPVMFFFMFNDYSSGLNFYYFVSLFFSAAIMWLL 573 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580 K E L+ L + + + N+ Sbjct: 574 RKTTNDE-KLLSILEANYKEAQNN 596 >gi|224437877|ref|ZP_03658824.1| putative inner membrane protein translocase component YidC [Helicobacter cinaedi CCUG 18818] gi|313144326|ref|ZP_07806519.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129357|gb|EFR46974.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 599 Score = 282 bits (721), Expect = 1e-73, Method: Composition-based stats. Identities = 129/616 (20%), Positives = 256/616 (41%), Gaps = 85/616 (13%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI---DDRA 62 +A+ LS+ + F + + +T + Q + + D + Sbjct: 15 RVLIAVGLSIAFFAVYAYFVPQKPKTHTSQAQNTQKTTESQAQTAPQTSQPTLENLQDSS 74 Query: 63 QALSMSPRVE---------------LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 A+ + + +++ I+ G + + L+ + Sbjct: 75 PAIESADSISPTTTPQSLKQRIIAHIESDEFEIEIDALG-RIKQVYLKDEKFTRHEQQSL 133 Query: 108 VTLLSPS-NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP----------- 155 ++ K+ AE D +S + +L + TP Sbjct: 134 FGMIGEVLGFKSQAKAERDKLSLFGDSQLHTMEVRFTDTELNKKAFETPYVASVSHFKLG 193 Query: 156 -----IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210 + L +N +++ ++ +++ + + + + N + S R P Sbjct: 194 NTPYELTLT-QNLGDVVLKKILTIHPNLRYDVRVEL-NKPDIEYFVSNGMR-----PTAD 246 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH---ESNSWLGISDKYWASVFIPSK 267 +T+ + + D L + + SD ++ +S++ D+Y+ S+F Sbjct: 247 PDTYAFRGVVTRNVNDGVLTKIEDSDATADYLAKQAMDMRESSFVASVDRYYTSLFFTQA 306 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + + + + +F N + GAK + + +++L Sbjct: 307 QKGLYVVVSGDNAHNPMPYVRFVGNA-----------EFSGYIGAKFYKVLQGIDENLTG 355 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ++++G F AKP+F+L+ Y Y+L GN+G AI+L T+ V+++ +PL + VS Sbjct: 356 -----VVEYGRITFFAKPLFLLLEYLYDLCGNWGWAIVLLTLIVRVVLYPLTYRGMVSMQ 410 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K++ PK+ EL+ ++K P Q LQ M+ LYK H NP+ GC P++LQIPVFFAIY+V+ Sbjct: 411 KLKDLAPKMKELQARYKDDP-QKLQIHMMDLYKKHGANPIGGCLPLILQIPVFFAIYRVL 469 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E++ + + WI DL+A DP + P++M LSM++ ++ Sbjct: 470 HNAVELKSSAWILWIDDLSAIDPYFVL-------------------PVLMGLSMYVSQRL 510 Query: 508 SPPP-ADKGQAMILNWMPVV--FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +P D Q I +P V F + FPAGL++YW+ +N+ SI+QQ +I K+ ++ Sbjct: 511 TPSNFTDPMQEKIFKMLPWVFTIFFIIFPFPAGLVLYWTVNNIFSIIQQMLINKVMESKK 570 Query: 565 GLIDRLRSTFSKNYNS 580 L ++ Sbjct: 571 AKEIALHHEKHEHNKE 586 >gi|299140577|ref|ZP_07033715.1| inner membrane protein OxaA [Prevotella oris C735] gi|298577543|gb|EFI49411.1| inner membrane protein OxaA [Prevotella oris C735] Length = 644 Score = 281 bits (719), Expect = 2e-73, Method: Composition-based stats. Identities = 130/622 (20%), Positives = 254/622 (40%), Gaps = 59/622 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------------RKNIQTVKQPNQ 48 M+ N + L +++ + +Y P EE + T + Sbjct: 1 MD--KNNIIGFLLIAVVLIGFS-WYNQPSAEEQRAAFVKDSIKHVNKSQSLKATQLAEKR 57 Query: 49 VDNSYAAVLIDDRAQAL-----SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH----- 98 + ++DD + ++ LKN + ++N KGA + ++GY Sbjct: 58 KQQAERQKILDDTTSLFHKTLTGNAEQIVLKNKKVELTLNTKGATVEKAVIKGYVGHNLK 117 Query: 99 -LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 D S++ V L + ++ +Y A+ ++T++ +P+ T + Sbjct: 118 VKDGSADQKDVILFNGADQSLSYMLSAKETNINTSDLYFVPSQVTDSTVTFTANAGEGKT 177 Query: 156 IKLVFKNANNILFERTISLDEH-YLFK-IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + L + + + +S LF T+ N D++R RG ++ AT T Sbjct: 178 LTLKYVLGKDYMLHMQLSAQGMAGLFSPGTQTMDVNWKDKVRQQERGFTFENR--YATLT 235 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + EG L + E IE W+ ++++++V I + ++ Sbjct: 236 YHKSEGGTDYLNEGK--EITDEAIEDK--------IDWIAFKNQFFSAVMIAKNDFQNNA 285 Query: 274 QFKYL-SDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR-- 329 + + + Y ++ A T P + + G +F + E + + Sbjct: 286 LMTSIPQEKGSGYLKQYEAKMKTFFDPTGKQASEFDFYYGPNDFRLLQKMEGECHFGKDL 345 Query: 330 -FEMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVS 385 + L+ GW F + + F L G N GI ++L T+ +KLL +P+ KK Y+S Sbjct: 346 QMQRLVYLGWPLFRIINRWFTLYVFDFLTGMNINMGIVLILITLLLKLLTYPMVKKSYMS 405 Query: 386 TANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +A M+ ++PK+DE ++F + Q+ Q+AM+ Y + ++PL+GC P+L+Q P++ A++ Sbjct: 406 SAKMRVLKPKLDEATKQFNKPEDQMQKQQAMMSEYAKYGVSPLSGCLPMLIQAPIWIAMF 465 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSL 499 + ++++R + WIKDL+ DP NI+ + L F + +M++ Sbjct: 466 NFVPNAIQLRGES-FLWIKDLSTFDPIWEWNHNIWLIGDHLSLTCILFCVANVLYTVMTM 524 Query: 500 SMFI-QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 QM K ++ MPV+F F + + AGL Y+ S S + K Sbjct: 525 RQQKDQMVGQQADQMKMMQWMMFLMPVMFFFMFNDYSAGLNFYYFVSLFFSAAIMWALRK 584 Query: 559 MHGAEIGLIDRLRSTFSKNYNS 580 E L+ L + +N + Sbjct: 585 TTNDE-KLLAILEQRYQENKAN 605 >gi|307717725|ref|YP_003873257.1| hypothetical protein STHERM_c00080 [Spirochaeta thermophila DSM 6192] gi|306531450|gb|ADN00984.1| hypothetical protein STHERM_c00080 [Spirochaeta thermophila DSM 6192] Length = 573 Score = 281 bits (719), Expect = 2e-73, Method: Composition-based stats. Identities = 132/598 (22%), Positives = 240/598 (40%), Gaps = 59/598 (9%) Query: 1 MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA-- 54 ME N +A+ LS +++ Q ++ + + + + Q +S Sbjct: 1 ME--RNVVIAVILSAVVIIVSAVINQMLFMSQVPQVPAPVEEEVLSETPTPQATSSQEGS 58 Query: 55 -------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + A + V ++P + + +G L L + + Sbjct: 59 SLLSEGLPSGLSVEALLPAEDREVVYRSPLMEVVFSSRGGTVRSLKLLTHR---DGEESV 115 Query: 108 VTLLSPSNTKNAYFAELD----YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 + P +NA+ + + + P+ TV L+ P + Sbjct: 116 EMVYRPEGGRNAFSLSIGKGDLLLDVPFQVRRPDERTV-EFFQDVRLSGLPPFR------ 168 Query: 164 NNILFERTISL-DEHYLFKIVDTVTN--NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + E YLF + + N NS + F + PQ + Sbjct: 169 ----VTKRYRFYPEEYLFDLEVELVNSENSSLPLNFEGVMYTLDTGPQIGPPFAALDRYG 224 Query: 221 IA----VLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275 + E + ++ IS E + +W+ IS KY+ + IP + F Sbjct: 225 EYRKFFYFLNGKRKEVR---LDPGKISELEEGDPTWVAISGKYFTLIAIPLLPQ-YDVAF 280 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPR 329 + +G IT + G K + Y K L+ Sbjct: 281 STVVEG-DLPLGSTVYLYRPAARSARITDLYRFYVGPKISGELSKYNKKNENSAGLSELH 339 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E ++D ++ + + F+ ++ N+G+AI+L T+FVK+L FPL K Y S + M Sbjct: 340 LEKVVDTSLLGWLEGILKFFLQIFFRIIPNYGVAIILLTLFVKILLFPLTHKSYESASKM 399 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + + PK++E+R ++K P Q + + + LY+ +NPL GC P+LLQIP+FFA+Y + S Sbjct: 400 QQLAPKMEEVRNRYKDDP-QRMNQELALLYQKEGVNPLGGCLPLLLQIPIFFAMYGLFSS 458 Query: 450 SLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 ++R A F GWI DL+ + F P L G+ + + P+I+ ++ I K++ Sbjct: 459 HFDLRGATFIPGWIDDLSVPESVFHFD----TPLPLLGWTDIRLLPLILVVTQIISTKIT 514 Query: 509 PPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + Q + + +PVVF+F L + PAGL++YW N+ +I QQ I ++ + Sbjct: 515 QGASSSSQNQVFMYVLPVVFLFILYNAPAGLLVYWVAMNIFTIAQQLYINRVMKRKTS 572 >gi|309379512|emb|CBX21878.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 299 Score = 281 bits (719), Expect = 2e-73, Method: Composition-based stats. Identities = 98/285 (34%), Positives = 148/285 (51%), Gaps = 25/285 (8%) Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y A I G T L+AG + I + ++ D+G + Sbjct: 34 NDKLYSASVGVPLAAIPAGAKAETAVNLYAGPQTTSVIAGIAD-----KLQLAKDYGKVH 88 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + A P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++ Sbjct: 89 WFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIK 148 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+ Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ G Sbjct: 149 EKYGDD-RMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLG 207 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ +DP I PIIM+ +MF Q ++PPP D QA ++ Sbjct: 208 WITDLSRSDPYYIL-------------------PIIMAATMFAQTYLNPPPTDPMQAKMM 248 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 MP+VF FPAGL++YW +N+++I QQ I + + Sbjct: 249 KIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRA 293 >gi|304382921|ref|ZP_07365403.1| inner membrane protein OxaA [Prevotella marshii DSM 16973] gi|304335946|gb|EFM02194.1| inner membrane protein OxaA [Prevotella marshii DSM 16973] Length = 631 Score = 281 bits (719), Expect = 2e-73, Method: Composition-based stats. Identities = 116/626 (18%), Positives = 241/626 (38%), Gaps = 75/626 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + L ++ + +Y P EE+ + Q D Sbjct: 1 MD--KNTIIGFVLIAAVLIGFS-WYSQPSAEEIAAQHTQDSLTLVAKQRAEKQQKAAEDA 57 Query: 61 RAQALS-----------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 R + L+ + + LKN + +++ KG ++ + + Sbjct: 58 RKKTLTSVAKEDTTVLFYASMKGTAQNIVLKNSKVELTLSTKGGTVAKAVIKNFKDHNGN 117 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 VTL + + + L+++ N + + + + + + Sbjct: 118 KD--VTLFTEKDQR------LNFLLAGKNSNIITEDLFFTPSQ----VTDSTVTMTATTG 165 Query: 164 NNILFERTISLDEHYLFKIVDTVTN--------------NSIDQIRFSPRGRIMRHKPQT 209 L + Y+ V D+ R RG ++ T Sbjct: 166 RGQAIVLHYLLGKDYMLHASMQVNGMADLFAPTYRSMDVEWTDKARQQERGFTFENRYST 225 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 T + + +G L S + E+ W+ ++++++V I + Sbjct: 226 LT--YHLTKGGTDYLNATS----------EKKDEPVEETIDWIAFKNQFFSAVMIAKNDF 273 Query: 270 SFHSQFKYL-SDGHARYQAKFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAI 327 + +S + + + Y ++A T T T F + G +F + E+ Sbjct: 274 APNSLMTSIPQEKGSGYLKDYAAKAKTFFDPTGKTPTEFEFYFGPNDFRLLQSIEQQSKF 333 Query: 328 PR---FEMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKK 381 + + L+ GW F + + F L N GI ++L T+ +KL+ FPL KK Sbjct: 334 GKDLELQRLVYLGWPLFRIINRWFTLYVFDGLTAMNINMGIVLILITLLLKLITFPLVKK 393 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVF 440 Y+S+A M+ ++PK+DE +++ + Q+ Q+AM+ +Y + ++PL+GC P+L+Q+P++ Sbjct: 394 SYMSSAKMRVLKPKLDEATKQYDKPEDQMQKQQAMMTMYSKYGVSPLSGCLPMLIQMPIW 453 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPI 495 A++ + ++++R + WI+DL+ DP +++ + L F + Sbjct: 454 IAMFNFVPNAIQLRGES-FLWIQDLSTYDPIWEWHDSLWLIGDHLSLTCILFCVANVLYS 512 Query: 496 IMSLSMFI-QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 IM++ QM K ++ MPV+F F + + +GL Y+ S S Sbjct: 513 IMTMRQQRDQMVGQQAEQMKVMQYMMYVMPVMFFFMFNDYSSGLNFYYFVSLFFSAAIMW 572 Query: 555 VIMKMHGAEIGLIDRLRSTFSKNYNS 580 + + E L+ L + + +N N+ Sbjct: 573 ALRRTTNDE-KLLAILEANYQENKNN 597 >gi|315187341|gb|EFU21097.1| membrane protein insertase, YidC/Oxa1 family [Spirochaeta thermophila DSM 6578] Length = 573 Score = 281 bits (719), Expect = 2e-73, Method: Composition-based stats. Identities = 133/598 (22%), Positives = 240/598 (40%), Gaps = 59/598 (9%) Query: 1 MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA-- 54 ME N +A+ LS +++ A Q ++ + + + + Q +S Sbjct: 1 ME--RNVVIAVILSAVVIIASAVINQMLFMSQVPQVPTPVEEEVLSETPTPQATSSQEGS 58 Query: 55 -------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + A + V ++P + + +G L L + + Sbjct: 59 SLLSEGLPSGLSVEALLPAEDREVVYRSPLMEVVFSSRGGTVRSLKLLTHR---DGEESV 115 Query: 108 VTLLSPSNTKNAYFAELD----YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 + P +NA+ + + + P+ TV L P + Sbjct: 116 EMVYRPEGGRNAFSLSIGKGDLLLHVPFQVRRPDERTV-EFFQDVRLGGLPPFR------ 168 Query: 164 NNILFERTISL-DEHYLFKIVDTVTN--NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + YLF + + N NS + F + PQ + Sbjct: 169 ----VTKRYRFYPGEYLFDLEVELVNSENSSLPLNFEGVMYTLDTGPQIGPPFAALDRYG 224 Query: 221 IA----VLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275 + E + ++ IS E + +W+ IS KY+ + IP + F Sbjct: 225 EYRKFFYFLNGKRKEVR---LDPGKISELEEGDPTWVAISGKYFTLIAIPLLPQ-YDVAF 280 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPR 329 +++G IT + G K + Y K L+ Sbjct: 281 STVAEG-DLPLGSTVYLYRPAARSARITDLYRFYVGPKISGELSKYNKKNENSAGLSELH 339 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E ++D ++ + + F+ L+ N+G+AI+L T+FVK+L FPL K Y S + M Sbjct: 340 LEKVVDTSLLGWLEGILKFFLQIFFRLIPNYGVAIILLTLFVKILLFPLTHKSYESASKM 399 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + + PK++E+R ++K P Q + + + LY+ +NPL GC P+LLQIP+FFA+Y + S Sbjct: 400 QQLAPKMEEVRNRYKDDP-QRMNQELALLYQKEGVNPLGGCLPLLLQIPIFFAMYGLFSS 458 Query: 450 SLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 ++R A F GWI DL+ + F P L G+ + + P+I+ ++ I K++ Sbjct: 459 HFDLRGATFIPGWIDDLSVPESVFHFD----TPLPLLGWTDIRLLPLILVVTQIISTKIT 514 Query: 509 PPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + Q + + +PVVF+F L + PAGL++YW N+ +I QQ I ++ + Sbjct: 515 QGASSSSQNQLFMYVLPVVFLFILYNAPAGLLVYWVAMNIFTIAQQLYINRVMKRKTS 572 >gi|288926777|ref|ZP_06420687.1| inner membrane protein OxaA [Prevotella buccae D17] gi|288336458|gb|EFC74834.1| inner membrane protein OxaA [Prevotella buccae D17] Length = 632 Score = 281 bits (719), Expect = 2e-73, Method: Composition-based stats. Identities = 122/622 (19%), Positives = 260/622 (41%), Gaps = 60/622 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-------RKNIQTVKQPNQVDNSY 53 M+ N + + L +++ + +Y P EE + + +++ + D + Sbjct: 1 MD--KNTIIGMVLIAALLFGYS-WYSQPSAEEQRAAFVQDSIAQAKKRELEKAQKADAAA 57 Query: 54 AAVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYH----- 98 +A A + + RV LKN + ++N KGA + ++ Y Sbjct: 58 RKQTEQQQAAADTTALFHAAMQGEEQRVVLKNNKVELTLNSKGATVERAVVKNYVGHDIN 117 Query: 99 -LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 D S + VTL + + A+ ++TA+ P++ T + Sbjct: 118 VKDGSKDRKDVTLFEGKDQSLKFMLAAKEANINTADLYFTPSAQTDSTVTFTASAGAGRS 177 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVD--TVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + L + + L +S++ D T+ + D+++ RG ++ AT T Sbjct: 178 LSLKYTLGRDYLLHMQLSVEGMGGLFAPDMKTLDIDWQDRVKQQERGFTFENR--YATLT 235 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + G L + S + ES W+ ++++++V I + ++ Sbjct: 236 YHETAGGTDYLSETS----------EKVDEPCKESIDWVAFKNQFFSAVMIVKDDFQKNA 285 Query: 274 QFKYL-SDGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR-- 329 + + + Y ++ A T P + + G +F + E + + Sbjct: 286 LLTSIPQEKGSGYLKQYQARLKTAFDPNGRQPSEFEFYFGPNDFRLLQKVEHESRFGKSL 345 Query: 330 -FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVS 385 E L+ GW F F + F + + N+ GI ++L T+ +K+L +P+ KK Y+S Sbjct: 346 EMERLVYLGWPLFRWINRFFTIYVF-DFLRNYFPMGIVLILITLLLKVLTYPMVKKSYMS 404 Query: 386 TANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +A M+ ++PK++E +++ + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ Sbjct: 405 SAKMRVLKPKLEEATKQYDKPEDQMQKQQAMMAEYSKYGVSPLSGCLPMLIQMPIWIAMF 464 Query: 445 KVISISLEMRHAPFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 + ++++R + W+KDL+ DP N++ + L F + M++ Sbjct: 465 NFVPNAIQLRGQS-FLWMKDLSTFDPLFEWNHNLWLIGDHLSLTCILFCVAQVLYSWMTM 523 Query: 500 SMFI-QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 QM K ++ MP++F F + + +GL Y+ S S + K Sbjct: 524 RQQRDQMVGQQAEQMKMMQWMMYLMPLMFFFMFNDYSSGLNFYYFVSLFFSAAIMWTLRK 583 Query: 559 MHGAEIGLIDRLRSTFSKNYNS 580 + L++ L + + +N N+ Sbjct: 584 TTNDK-KLLEILEARYRENKNN 604 >gi|317011581|gb|ADU85328.1| putative inner membrane protein translocase component YidC [Helicobacter pylori SouthAfrica7] Length = 548 Score = 281 bits (719), Expect = 2e-73, Method: Composition-based stats. Identities = 140/603 (23%), Positives = 248/603 (41%), Gaps = 86/603 (14%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERK------NIQTVKQPNQVD 50 M++N N +A+ALS + + + F+ P ++ P Sbjct: 1 MDKNNNTNLRLILAVALSFLFITLYSYFFQKPNKTTTETTKQEVTHNNTALNPNAPTATQ 60 Query: 51 NSYAAVLIDDRAQALSMS---PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 N A I ++S R+E+ L + + L+ Sbjct: 61 NFSATQTIPQENLLSAISFEHARIEI--DFL--------GRIKQVYLKDKKYLTPKQKGF 110 Query: 108 VT----LLSPSNTKNAYFAELDYVST----------ANNIELPNSNTVWNLISGKILTPT 153 L S + EL + + NT ++ S L P Sbjct: 111 FEHVSHLFSSKESVQPPLKELPLLGDNLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPN 169 Query: 154 TPIKLVFKNANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 + L + ++ +T++ + HY +I NN ++P Sbjct: 170 EQLVLTQDLGD-LVIIKTLTFYDDLHYDLQIAFKSPNN-----IIPSYVITNGYRPVADL 223 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 +++ G + DK + + + D ++ I F +L D+Y+ ++ F Sbjct: 224 DSY-TFSGVLLENNDKKIEKIEDKDAKE--IKRFSNIL-FLSSVDRYFTTLLFTDNPQGF 279 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 + + F + T + G K++ ++ P Sbjct: 280 EVLIN--PETGTKNPLGFIS--------LKNEATLHGYIGPKDYRSLKAIS-----PMLT 324 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS +K Sbjct: 325 DAIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQKLKE 384 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + PK+ EL+E++K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++ Sbjct: 385 LAPKMKELQEEYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAV 443 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E++ + + WI DL+ DP I P++M SM+ ++P Sbjct: 444 ELKSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMYWHQSVTPNT 484 Query: 512 A-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 D QA I +P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + Sbjct: 485 MTDPMQAKIFKLLPLLFTLFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHVQN 544 Query: 571 RST 573 + Sbjct: 545 KKE 547 >gi|213022847|ref|ZP_03337294.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 346 Score = 281 bits (718), Expect = 3e-73, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 146/267 (54%), Gaps = 10/267 (3%) Query: 208 QTATNTFGVQE--GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP 265 T ++ F + G D+ + K+ I + N W+ + +Y+A+ +IP Sbjct: 13 DTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIP 72 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + + + F + G+ + A + + PG++ T+ L+ G + + Sbjct: 73 RNDGTNN--FYTANLGNGIVAIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAV---- 126 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S Sbjct: 127 -APHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTS 185 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A M+ +QPKI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F A+Y Sbjct: 186 MAKMRMLQPKIQAMRERLGDDK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYY 244 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTN 472 ++ S+E+RHAPF WI DL+A DP + Sbjct: 245 MLMGSIELRHAPFALWIHDLSAQDPIH 271 >gi|260911838|ref|ZP_05918405.1| inner membrane protein OxaA [Prevotella sp. oral taxon 472 str. F0295] gi|260634049|gb|EEX52172.1| inner membrane protein OxaA [Prevotella sp. oral taxon 472 str. F0295] Length = 627 Score = 280 bits (716), Expect = 4e-73, Method: Composition-based stats. Identities = 124/612 (20%), Positives = 247/612 (40%), Gaps = 52/612 (8%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N N + L +++ + + P EE+ +++ Q K+ + A +RAQ Sbjct: 2 NKNNLIGFILIGLVLVGFSLW-NRPSEEELAKQQQKEQIEKKNKEEQTKAKAKTDAERAQ 60 Query: 64 ALSMS----------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 AL + + LKN L ++ KG D + + + + Sbjct: 61 ALQQATTDTSALFHKALTGEAKSIVLKNSKLQLQLSTKGGVVDKAVISNF--TDRNGNKD 118 Query: 108 VTLLSPSNTKNAYFAEL--DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 +TL + Y YVSTA+ + T + + + + N Sbjct: 119 LTLFQGKDQSLTYTFATKDGYVSTADLFFTASDVTDTTVTFTAEAAAGKTLTIKYVLGNE 178 Query: 166 ILFERTISLDEHYLFKI--VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + +IS ++TV N ++ +G + A+ T+ EG Sbjct: 179 YMLHTSISATGMGGILNPSINTVDINWQERCAQQEKGFTFESR--YASLTYHNTEGGTDY 236 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDGH 282 L + S +K ++ + W+ ++++++V I + ++ + + Sbjct: 237 LSETS---EKIDEV-------IEDKIDWVAFKNQFFSAVMIAKTDFGTNATLTSIPQEKG 286 Query: 283 ARYQAKFSAN-EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGW 338 + Y ++ A + T P + T + G +F + E + E L+ GW Sbjct: 287 SGYLKQYQAKLKTTFDPTGAQPTQLDFYYGPNDFRLLQKMESQSHFGKDLELERLVYLGW 346 Query: 339 FYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 F + + F L G N G+ ++L T+ +K + FPL KK Y+S+A M+ ++PK Sbjct: 347 PLFRIINRWFTLYVFDWLTGLDINMGVVLILITLLLKFITFPLVKKSYLSSAKMRVLKPK 406 Query: 396 IDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 ++E ++F K Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + ++++R Sbjct: 407 LEEATKEFNKPEDQMKKQQAMMSEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLR 466 Query: 455 HAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-QMKMS 508 + WI DL+ DP NI+ + L F + +M++ QM Sbjct: 467 GES-FLWIDDLSTYDPVLEWGHNIWLIGDHLSLTCILFCLSNVLYSMMTMRQQRDQMVGQ 525 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 K ++ MPV+F F + + +GL Y+ S S + K E L+ Sbjct: 526 QAEQMKMMQWMMYLMPVMFFFMFNDYSSGLNFYYFVSLFFSAAIMWFLRKTTNDE-KLLS 584 Query: 569 RLRSTFSKNYNS 580 L + + + ++ Sbjct: 585 SLEANYKEAQSN 596 >gi|294056003|ref|YP_003549661.1| membrane protein insertase, YidC/Oxa1 family [Coraliomargarita akajimensis DSM 45221] gi|293615336|gb|ADE55491.1| membrane protein insertase, YidC/Oxa1 family [Coraliomargarita akajimensis DSM 45221] Length = 604 Score = 280 bits (716), Expect = 5e-73, Method: Composition-based stats. Identities = 131/622 (21%), Positives = 238/622 (38%), Gaps = 97/622 (15%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN--------NERKNIQTVKQPNQVDNS 52 M++ N F+ I L + + + E+ E +++ T + S Sbjct: 1 MDK-KNTFLGI-LFLAAGLGFMFWQSAQVQEQQQQEAYEQAIAEEESLATTPSDVAISAS 58 Query: 53 YAAVLIDDRAQAL-----------------SMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 A A L + V L N + + G ++ Sbjct: 59 NAGEGAAPVADLLVKEVAQAPVEQVPVVDPAEVKTVVLANDFIEVEFSSLGGAIKEVRFL 118 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAY-FAELDYVSTAN-NIELPNSNTVWNLISGKILTPT 153 + ++ Y F E + + +++ L + Sbjct: 119 Q---------------TKRGGRDDYVFNESGLLPALSLGLDVNGELQELTLNYAIEVQDE 163 Query: 154 TPIKLVFKNANNILFERTISLDEH------YLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 I N ++ R S+ YL K TV N S I + + Sbjct: 164 YSITFALDAGNGLILRRNYSIRNGEGDFDPYLVKHTTTVANQSEAPIALNNIYLNLGTVR 223 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK----------------SSISNFHESNSW 251 GDK+ K++ I K I + W Sbjct: 224 PIVEKALPNYLNVGFYNGDKA----KFTPINKLSGGSGFLGIGASSPKDEIVFDNTRVEW 279 Query: 252 LGISDKYWASVF----IPSKETSFHSQFKYLSD---GHARYQAKFSANEITILPGKSITT 304 + ++++ V + + + + D TI G + Sbjct: 280 ASVKNQFFTGVLSSEEVAKELYIYPVEMPKTGDTKPERPGITGSVGYELGTIAAGSAKAL 339 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 + G KEF + + ++ +G+F FI+K + M ++LV N+G++I Sbjct: 340 DFEYYVGPKEFKRLQSLGN-----YQDKIMQFGFFSFISKLLLSFMYLIHSLVPNWGLSI 394 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 ++ T+ +K++F+PL K S M IQ + EL+EKFK +P Q +Q+ ++L++ H + Sbjct: 395 VIMTICIKMIFWPLTAKASKSQKRMAKIQGPMAELKEKFKDNP-QKMQQETLKLFREHRV 453 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NPLAGC P+ +Q+P+F ++ ++ + E+R + W+ DL+ D F++ Sbjct: 454 NPLAGCLPLFVQMPIFLGLFYMLRTASELRFES-FLWVSDLSQPD----------TMFHI 502 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 GF V I P+IM ++MF+QM M P P AD Q I ++P VF+ L +F +GL++YW Sbjct: 503 AGFP-VNILPLIMGVTMFLQMSMMPVSPTADPAQQKIFKFLPFVFLIFLYNFSSGLVLYW 561 Query: 543 SWSNVISIVQQAVIMKMHGAEI 564 + N+++IVQQ + M + Sbjct: 562 TVQNILTIVQQKITNAMPDEPV 583 >gi|332877632|ref|ZP_08445375.1| membrane protein insertase, YidC/Oxa1 family domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684381|gb|EGJ57235.1| membrane protein insertase, YidC/Oxa1 family domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 606 Score = 279 bits (715), Expect = 6e-73, Method: Composition-based stats. Identities = 125/607 (20%), Positives = 233/607 (38%), Gaps = 52/607 (8%) Query: 1 MERNWN---YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME + L I+ W P EE+ + + + N N+ A Sbjct: 1 MEEKKFDLKSIIGFVLIF-ILLLWVMNNNRPTQEELAKRKAEQEQAAKANNPQNNAATAA 59 Query: 58 IDD-------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 D AQ + ++N + +IN KG ++ L+ + S V L Sbjct: 60 TADLGAFAYSNAQPTAKDGVTVIENKDVKLTINNKGGDLKEVLLKQFKT---YESMPVYL 116 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 + N A + N +L ++ ++L+ + K N E Sbjct: 117 IKDKNAIFALNFKTTQGQELNTQQLYFEPSLSQKDGKQLLS------MKVKTGENSYLEY 170 Query: 171 TISLD-EHYLFKIVDTVTN-----NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 +L E Y+ + NS + I + R + Q Sbjct: 171 VYTLPAEGYMVDVAVRSQGLSGVLNSQNPIELVWGLKARRMEKSVTYENRYTQS--AIRY 228 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 D + + + E SW+ + SV I + Y Sbjct: 229 ADDKINRMS----QGGNSGTKEEQVSWVAYKQHLFTSVLISDSAFANGDFLSYNIANEES 284 Query: 285 YQAKFSANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 K++ N + P G ++ + + G ++ + Y + + + WG F Sbjct: 285 KDVKYTKNLKSTFPLKTKGGELSESLHFYFGPSDYNVLKQYNDKYELTEL-IPLGWGIFG 343 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 ++ K +F+ + F + G+ I+L T+ V+LL P+ K YVS A MK ++P+I+E+ Sbjct: 344 WLNKWLFIPLYNFLADYFSVGLVIILMTIIVRLLLSPIVYKSYVSQAKMKVLRPEIEEIN 403 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 +K+ P Q+ + LY +NP++GC P LLQ+PVF A++ +R + Sbjct: 404 KKY--EEPMKRQQETMALYSKAGVNPMSGCIPALLQLPVFLALFNFFPTEFGLRQKS-FL 460 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-------PPAD 513 W +DL++ D IF L +PFY HV ++P++ S+++FI M+ P Sbjct: 461 WAEDLSSYD--AIFELPFSIPFYGS---HVSLFPLLASVAIFIYSMMTMAQTVQPQQPGM 515 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++ PV+ +F +++ +GL +Y+ SN+++I+ I E + +++ Sbjct: 516 PNMKFLIYLSPVMMLFFFNNYASGLSLYYFVSNLLTILIMLAIKHWILDEKKIHAQIQEN 575 Query: 574 FSKNYNS 580 K Sbjct: 576 KMKPKKE 582 >gi|328946937|ref|YP_004364274.1| Membrane protein oxaA [Treponema succinifaciens DSM 2489] gi|328447261|gb|AEB12977.1| Membrane protein oxaA [Treponema succinifaciens DSM 2489] Length = 602 Score = 279 bits (715), Expect = 7e-73, Method: Composition-based stats. Identities = 140/615 (22%), Positives = 254/615 (41%), Gaps = 61/615 (9%) Query: 1 MERNWNYFVAIALSVIIVYAW---QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA--- 54 ME N +AIALS I++ Q YV PR +E E+ K+ Q A Sbjct: 1 ME--KNTILAIALSTIVLVVSLFIQTKYVMPRQQERAREQAAEFEAKKEEQEAQIKAEKE 58 Query: 55 ---AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + Q + + +G L + + + V ++ Sbjct: 59 MISASFSEATVQNSEDVQEFVISTNKAKVTFTNRGGDITSYKLLEHKDKETGSG--VEMV 116 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN----IL 167 + + N F+ + T N P N ++N+ T K++ Sbjct: 117 NNVTSSNRAFSLS-FCGTEN----PALNDIFNVTKKDDYTILFYRDYEIKDSEGNPKKFT 171 Query: 168 FERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA-----TNTFGVQEGFI 221 + + + Y FK+ ++ + + +R PQ N + V++ F+ Sbjct: 172 LGKRYTFSPDDYAFKLDVSIISKEGGEFGIGGAAYTLRTAPQIGPKYDKKNRYEVRQ-FL 230 Query: 222 AVLGDKSLVE---QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 A+ G K + K+ D+ S W G+ KY+ + PS + + K Sbjct: 231 ALNGGKKFRKNISDKFYDL---------NSVDWAGVGGKYFTMLVKPSSPSDMLGKIKVS 281 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEM 332 + + +L S T +++ G ++ + Y +L+ +F Sbjct: 282 TKSENEDGCQIFIPRKPVLDETS-NDTYYIYVGPRQERELIKYNDQTKNAWNLSNAKFNE 340 Query: 333 LIDW-GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + G+ +I + + + N+GI+I++ T+ +K++ FPL K V + M+ Sbjct: 341 ALQTTGFLSWIEIILKWCLEKINLIAHNWGISIIILTILLKIVLFPLNKNAAVGSLKMQK 400 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 IQPK+ L+EK+K Q L M +LYK NP++GC P+++Q+ + FA+Y V + Sbjct: 401 IQPKMKVLQEKYKND-QQKLSMEMQKLYKEAGYNPMSGCLPMVVQMFILFALYNVFNNYF 459 Query: 452 EMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMKMSP 509 E R A F GWI+DL+A D +I+T +PF M+ + + P I + S + K++ Sbjct: 460 EFRGASFVKGWIEDLSAGD--SIWTWKRNIPFISAFTMNNLRLLPFIYTASQLLNGKITQ 517 Query: 510 ------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ MP++F F + P+GL++YW+ SN+I I QQ VI + + Sbjct: 518 YGNPGTGANQSQMKFMMYGMPLMFFFLFYNVPSGLLLYWAVSNIIQIGQQLVINSVMNKK 577 Query: 564 IGLIDRLRSTFSKNY 578 ++ T +KN Sbjct: 578 RSELEN-EKTVNKNV 591 >gi|220919593|ref|YP_002494897.1| YidC translocase/secretase [Anaeromyxobacter dehalogenans 2CP-1] gi|254772745|sp|B8JDK5|OXAA_ANAD2 RecName: Full=Inner membrane protein oxaA gi|219957447|gb|ACL67831.1| YidC translocase/secretase [Anaeromyxobacter dehalogenans 2CP-1] Length = 546 Score = 279 bits (713), Expect = 1e-72, Method: Composition-based stats. Identities = 127/568 (22%), Positives = 225/568 (39%), Gaps = 49/568 (8%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ-TVKQPNQVDNSYAAVLIDDR 61 N +A LSV I+ WQ + + + AA Sbjct: 4 DNRRILLATVLSVGILILWQVIFPTKKAPPKPAHPPAAEVAKPAAPASPAPGAAAPAVPA 63 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNL-----RGYHLDVSSNSPIVTLLSPSNT 116 + V L ++ G L L R D +V + S Sbjct: 64 PPPDAPEETVTLAGKGFEATLTTYGGALKSLRLEGDKFRKQEKDREVQIDLVHVTSGQPY 123 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 + A + + P + +++ + T ++ N+ +T + Sbjct: 124 PLSLSASPELGGAVDVAADPGARAPMRIVANDASSVTFEGRV-----GNLAARKTFRVTG 178 Query: 177 H-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + ++ + M ++ G F+ + +++ Sbjct: 179 KPYELALDVELSGGAGSGTVGVLYPAFMPPDTKSGGIFSGPPLDFVRPVCRAGTTTERFD 238 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 ++ + SW G+ Y+ + +P++ + + G Sbjct: 239 LAKEGAPEKLEGQVSWAGVDQHYFVAAVLPAEPIGTCTFVRGPVKGAGLAAVAVPVE--- 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG----WFYFIAKPMFMLMS 351 G + + ++AG K+ T+ Y + FE ID+G +F A+ + +M Sbjct: 296 ---GGARKLSLTVYAGPKDLDTLRGYGR-----GFESAIDYGAVAKFFALFARGLLYVMR 347 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + +V N+G+AI+L TV V+L+ FPL K S M+ +QP+I++L+ KF + + Sbjct: 348 WLEAIVRNWGVAIILLTVLVRLVLFPLTYKSMQSMNEMRKLQPEIEKLKAKFGDD-REKM 406 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 A++QLY+ H +NPL GC P+LLQ+PV+FA+Y + S+E+ P + W+KDL A DP Sbjct: 407 NLAVMQLYQKHKVNPLGGCLPMLLQMPVWFALYAALQTSVELYREP-FLWMKDLTAHDPY 465 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMPVVFVFA 530 I PI M +S F+ K+SP PAD QA ++ + P F Sbjct: 466 FIL-------------------PIAMGISSFVMQKLSPQPADNAQAKMMLYFFPGFFTVI 506 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + P GL +Y +N++SIVQQ ++MK Sbjct: 507 MLFVPGGLTLYIFVNNLLSIVQQQLMMK 534 >gi|323345690|ref|ZP_08085913.1| inner membrane protein OxaA [Prevotella oralis ATCC 33269] gi|323093804|gb|EFZ36382.1| inner membrane protein OxaA [Prevotella oralis ATCC 33269] Length = 629 Score = 279 bits (713), Expect = 1e-72, Method: Composition-based stats. Identities = 122/616 (19%), Positives = 253/616 (41%), Gaps = 56/616 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + L ++++ + + E RK+ + + + + Sbjct: 1 MD--KNNIIGFVLIAVVLFGYTWWSQPSAEERAAAVRKDSVAAAEKEKAEILKKQKTLQM 58 Query: 61 RAQA----------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 +A++ S ++ LKN L ++N KGA + +RG+ + Sbjct: 59 QAESKEKELEDTSALFHAALQGQSEKIILKNNKLELTLNSKGATVEKAVIRGFKDRNGN- 117 Query: 105 SPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 VTL ++ Y A+ +STA+ +P+ T + I L ++ Sbjct: 118 -ANVTLFDAADQYMNYTLTAKETNISTADLFFVPSDVTDSTVTFTAQAGNGKNITLAYRL 176 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNN----SIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 + L +S+ + + + TN D+ R +G ++ AT T+ E Sbjct: 177 GTDYLLSMKMSV--NGMAGLFAPNTNTMDVDWKDKCRQQEKGFTFENR--YATLTYHNVE 232 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G L + +++ + W+ ++++++V I S +S + Sbjct: 233 GGTDYLNET----------KENVDETIEDKIDWVAFKNQFFSAVMIAKNNFSANSMMTSI 282 Query: 279 -SDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEML 333 + + Y ++ A T P + + + G +F + E + + + L Sbjct: 283 PQEKGSGYLKQYEAKMKTFFDPSGKMPSEFEFYYGPNDFRLLQRIETESTFGKDLQLQRL 342 Query: 334 IDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + GW F + + F L V G+ +++ T+ +KL+ +P+ KK Y+S+A M+ Sbjct: 343 VYLGWPLFRIINRWFTIYVFDWLSKVFPMGVVLIMITLLLKLITYPMVKKSYMSSAKMRV 402 Query: 392 IQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++PK+D +F + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + + Sbjct: 403 LKPKLDAATAQFNKPEDQMQKQQAMMSEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNA 462 Query: 451 LEMRHAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-Q 504 +++R + WIKDL+ DP NI+ + L F + M++ Q Sbjct: 463 IQLRGQS-FLWIKDLSTYDPIWEWGHNIWLIGDHLSLTCILFCVANLLYSWMTMRQQRDQ 521 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M + K ++ MPV F F + + +GL Y+ S S + K E Sbjct: 522 MVGAQAEQMKMMQWMMYLMPVFFFFMFNDYSSGLNFYYFISLFFSAAIMWALRKTTNDE- 580 Query: 565 GLIDRLRSTFSKNYNS 580 L+ L + + +N ++ Sbjct: 581 KLLATLEARYKENKDN 596 >gi|78776724|ref|YP_393039.1| putative inner membrane protein translocase component YidC [Sulfurimonas denitrificans DSM 1251] gi|78497264|gb|ABB43804.1| protein translocase subunit yidC [Sulfurimonas denitrificans DSM 1251] Length = 536 Score = 278 bits (712), Expect = 1e-72, Method: Composition-based stats. Identities = 141/587 (24%), Positives = 243/587 (41%), Gaps = 67/587 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV----KQPNQVDNSYAAV 56 M N +A+ LS + A+ Y + E + + + + P D + Sbjct: 5 MTPNQRLIIAVLLSFVFFIAYTAIYPTEQPTETAQVQNSTEQKVELKEAPKVEDIVGHKI 64 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG--YHLDVSSNSPIVTLLSPS 114 + A +S LK+ I I+ G + L Y+ + + ++ L+ S Sbjct: 65 SAQEATIANDLSTLTTLKSNDFILKIDTLG-RISSKVLLQEMYNTNDNVHA---QLIPQS 120 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTIS 173 TK + LD ++P + +I TP K+V +N+ + I+ Sbjct: 121 GTKPLFIRFLDPALNEEATKIP-----YTADISEINLQDTPQKVVLTQKLSNLTVTKEIT 175 Query: 174 L--DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 D HY + T + + G + ++ L Sbjct: 176 FYADGHYDVDVSLTQDK--------RYFIYLGQRPKVNEKEQMMAAVGALIYNDEELLTI 227 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D + + E D+Y AS+ S + D + F A Sbjct: 228 IEDGDANERKSYSHIEL---AAAFDQYSASIMY---GFSKDTNIIIDRDRDSNPIVYFEA 281 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + G + G K + T+H + P I++GWF F +KP+F L+ Sbjct: 282 VQNMKFSG---------YIGQKRYKTLHAIK-----PILTNAIEYGWFTFASKPLFQLLM 327 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + L+GN+G +I+ TV ++++ +PL K VS MK+I P++ L+ K+K P Q + Sbjct: 328 WLHGLIGNWGWSIVALTVLIRVVLYPLTYKGMVSMQKMKDIAPQVKALQAKYKGDP-QRM 386 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 A++ +YK H NPL GC P+LLQIPVFFAIY+V+ ++E++ AP+ W+ DL+ D T Sbjct: 387 NAAVMDMYKKHGANPLGGCLPMLLQIPVFFAIYRVLLNAVELQGAPWMLWVNDLSRMDST 446 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 + PI+M SM+ Q K++P D Q I ++P++F F Sbjct: 447 FVL-------------------PILMGASMYYQQKLTPSNFTDPLQEKIFKFLPIIFTFF 487 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +FP+GL++YW +N+ SI QQ ++ + K Sbjct: 488 FITFPSGLVLYWFVNNMFSIGQQFIVNQQFKNAKDAQIAAHKNVEKK 534 >gi|320109423|ref|YP_004185013.1| membrane protein insertase, YidC/Oxa1 family [Terriglobus saanensis SP1PR4] gi|319927944|gb|ADV85019.1| membrane protein insertase, YidC/Oxa1 family [Terriglobus saanensis SP1PR4] Length = 597 Score = 278 bits (712), Expect = 2e-72, Method: Composition-based stats. Identities = 117/590 (19%), Positives = 223/590 (37%), Gaps = 73/590 (12%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN-----------QVDNSY 53 + V + L ++ Q FY + + QT +QP+ Q Sbjct: 17 KSMLVPMLLIAGVLGGLQ-FYRSKHTQPLQAPSAQTQTAQQPSAVAPAAPGAAPQTTAQT 75 Query: 54 AAVLIDDRAQALSMS--PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A V A ++ + ++N +GA+ L+ Y + +V Sbjct: 76 ATVGATQAAPVVTAAAEQTTTIENELYRIEFTNRGAEVKSWILKRYKDNKGVPLDLVH-- 133 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + + A L + + + ++ LT + + +AN + +T Sbjct: 134 --AGAAREFGAPLSLYTYDSGLTAQLRQALYVPSVTGKLTAPQTLSFTY-SANGLDVTKT 190 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRF---SPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 DE YL D V + +R P G + + + + + Sbjct: 191 FRFDESYLLH-ADVVASRDGSPVRALIAWPGGFGDQDQVLDYNGS------QLESSSEGK 243 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS----------QFKYL 278 ++ + S ++G+ D+++ +VFIP + + + K Sbjct: 244 TDHVNFAKV--SGGKTLDGPLDYVGVVDQFFGAVFIPDNPQTATAVSLHQTIDVEKLKRS 301 Query: 279 SDGHARYQAKFSANEI---TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + + A T L S T ++AG K + + H ++D Sbjct: 302 TAITSTTPTGKIATVPIIGTALGDVSGHTQARIYAGPKSYTIL-HTVSTTGGETLAPIVD 360 Query: 336 WGWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 +G+F + KP+F + + V N+G AI++ T+ + L+ PL S M+ +QP Sbjct: 361 FGFFGIVGKPLFFALHFVQEHVASNWGWAIVVFTILINLVLLPLRILSMKSALKMQRLQP 420 Query: 395 KIDELREKFK-----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++D ++ ++ + ++QL K + +N GC P L+Q+P+ A++ ++ Sbjct: 421 QMDAIKARYAKYKVTDPKRADMNAEIMQLQKDNGVNMFGGCIPTLIQLPLLIAMFSMLQK 480 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 +E+R A W W+ DL AADP +I PI+M +S F+ P Sbjct: 481 VVELRQA-HWFWLHDLTAADPYHIL-------------------PIVMVVSQFLVQFYMP 520 Query: 510 PPA-DKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P D Q ++ MP + ++ +GL +YW N+I IVQQ V+ Sbjct: 521 SPGVDPQQQKMMAFMMPAFSGYMTWNYSSGLALYWCIGNLIMIVQQYVMN 570 >gi|153007343|ref|YP_001381668.1| 60 kDa inner membrane insertion protein [Anaeromyxobacter sp. Fw109-5] gi|166975849|sp|A7HIY8|OXAA_ANADF RecName: Full=Inner membrane protein oxaA gi|152030916|gb|ABS28684.1| 60 kDa inner membrane insertion protein [Anaeromyxobacter sp. Fw109-5] Length = 549 Score = 278 bits (711), Expect = 2e-72, Method: Composition-based stats. Identities = 133/583 (22%), Positives = 226/583 (38%), Gaps = 69/583 (11%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N +A LSV ++ WQ + P+ + + + Sbjct: 4 ENRRVLLATVLSVAVLIVWQFVFPSPKPKPQPPKPPEAAQRAEAPAAPAPGQPAAQAPAP 63 Query: 63 QALSMSPR--VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNA 119 +P V+L ++ G ++ L+G V + L + Sbjct: 64 AVPQDAPEQLVKLVGDGFEATLTSHGGAVKEIVLQGEKFRRDREGKPVQIDLVRVAKEQP 123 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF---------ER 170 Y + E +G + P+++V ++A + F + Sbjct: 124 YPLAVVATPELGGAE----------DAGNDVAARAPMRVVAQDARSATFEGRAGKATVRK 173 Query: 171 TISLDEH-YLFKIVDTVTN---NSIDQIRFSPRGRIMRHKPQTATNTF--GVQEGFIAVL 224 T L E Y + V + P P T F G F+ + Sbjct: 174 TYRLTEKAYELALDLEVQAPATQGGGIVVLYPGY----MPPDTKKGGFFSGPPVEFVRPV 229 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 +++ K + + +W G+ Y+ S P++ K G Sbjct: 230 CRAGEETERFDVDGKEAQEKLQGTVAWAGMDQGYFVSAVFPAQPAGTCLFAKGPVQGSGL 289 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG----WFY 340 L G S +++G K+ + Y ++ FE ID+G F Sbjct: 290 ------TALRLPLDGGSAKFGFTVYSGPKDLDHLRTYGRE-----FESAIDYGAMARPFA 338 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F A+ + +M + LV N+G+AI+L TV VK+L +PL K S M+ +QP+I++L+ Sbjct: 339 FFARLLLFVMRWLERLVANWGLAIILLTVLVKVLLYPLTAKSMQSMNEMRKLQPEIEKLK 398 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 K + L A +QLY+ H +NPL GC P+L+Q+P++FA+Y + S+E+ P + Sbjct: 399 AKHGND-REKLNLATMQLYQQHKVNPLGGCLPMLIQLPIWFALYATLQTSVELYREP-FL 456 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL DP + PI M +S ++ + SP PAD QA ++ Sbjct: 457 WIHDLTVKDPLYVL-------------------PIAMGVSQYVMQRFSPQPADNAQAKMM 497 Query: 521 -NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +MP F + S PAGL +Y +N++SI QQ +M+ A Sbjct: 498 LYFMPGFFTLLMLSVPAGLTLYIFVNNLLSIAQQQFMMRRMPA 540 >gi|225849760|ref|YP_002729994.1| inner membrane protein OxaA [Persephonella marina EX-H1] gi|225644791|gb|ACO02977.1| inner membrane protein OxaA [Persephonella marina EX-H1] Length = 537 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 124/585 (21%), Positives = 237/585 (40%), Gaps = 86/585 (14%) Query: 2 ERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 E F+ +++ A+ Y+YP +K + V+ ++ + Sbjct: 7 EMQKRMFIFFIAVAVLLIAYSIISSYLYPTEPSPEKNQKTQEVVEVKEEIKEQRKVPEPE 66 Query: 60 DRAQ-----------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 +R A ++ V + I+ GA+ + + + D+ Sbjct: 67 ERITYKQTGDYDLLLDKRRINADNLKDTVRINTDFGYIEISKIGARIVSIYVEKFKTDMI 126 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 S+ S T + E+ S + S + +L+F+ Sbjct: 127 SD--------FSKTNRLFPTEIITTSPELTALINFSPYSFRQEGD---------RLIFEL 169 Query: 163 ANN-ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 I + +++ + + + I + + FG G I Sbjct: 170 KQGDISVRKIFEVNKDSTLSLKID-----TEGLEKYGLSVINGISLKAESRAFG-HSGAI 223 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 DK L++ +DI+K W G +KY+ + S Sbjct: 224 IKT-DKELIKLD-ADIDKKQ--TIRGHILWAGEENKYFLQMLAVKGGFSAT--------- 270 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-----RFEMLIDW 336 + + + + + F F G K + + + ID+ Sbjct: 271 ---HVVPIAEEKTVVFSEIPTSVEGFFFGGPKLYSLLGDITEKYKKEWNIDLSLRESIDF 327 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G+F + KP+F++M + Y+ + N+G+ I++ TV ++++ FPL K + M ++ P+I Sbjct: 328 GFFGILGKPLFLIMHFIYDYIHNWGLTIIILTVLLRIVLFPLNHKSLKAMKKMADLAPEI 387 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +L++K+++ P Q LQ+ M++LY H NP++GC PI+ QIP+F A+Y V+ +++E++ Sbjct: 388 KKLQKKYQKDP-QKLQEEMMKLYAEHGTNPMSGCLPIVAQIPIFIALYNVLMVTVELKMV 446 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P + W++DLA DP I PI+M +SM Q ++P +DK Q Sbjct: 447 P-FLWVQDLADKDPYYIL-------------------PILMGVSMIAQQWITPS-SDKNQ 485 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +I+ M VF F +FPAGL++YW +N++ I Q ++ K G Sbjct: 486 KIIMYIMAFVFTFLFMNFPAGLVLYWLTNNILGIGQSFIVNKQMG 530 >gi|197124875|ref|YP_002136826.1| hypothetical protein AnaeK_4495 [Anaeromyxobacter sp. K] gi|254772746|sp|B4UKG1|OXAA_ANASK RecName: Full=Inner membrane protein oxaA gi|196174724|gb|ACG75697.1| 60 kDa inner membrane insertion protein [Anaeromyxobacter sp. K] Length = 546 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 129/568 (22%), Positives = 231/568 (40%), Gaps = 49/568 (8%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N +A LSV I+ WQ + ++ + K + A A Sbjct: 4 DNRRILLATVLSVGILILWQVIFPTKKVPPKPAPPPAAEVAKPAAPASPAPGAAAPAVPA 63 Query: 63 QALSM-SPRVELKNPSLIGSINLKGAQFDDLNL-----RGYHLDVSSNSPIVTLLSPSNT 116 V+L ++ G L L R D +V + Sbjct: 64 PPPDAPEETVKLAGKGFEATLTTYGGALKSLRLEGDKFRKQEKDREVQIDLVHVTDGQPY 123 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 + A + A+ P + +++ + T ++ N+ +T + Sbjct: 124 PLSLSASPELGGAADVAADPGARAPMRIVAKDASSVTFEGRV-----GNLAARKTFRVTG 178 Query: 177 H-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + ++ + + M ++ G F+ + +++ Sbjct: 179 KPYELALDVELSGGAGNGTVGVLYPAFMPPDTKSGGIFSGPPLDFVRPVCRAGTTTERFD 238 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 ++ + SW G+ Y+ + +P++ + + G A Sbjct: 239 LAKEGAPEKLEGQVSWAGVDQHYFVAAVLPAEPIGTCTFVRGPVKGAGL------AALAV 292 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG----WFYFIAKPMFMLMS 351 + G + + ++AG K+ T+ Y + FE ID+G +F A+ + +M Sbjct: 293 PVEGGARKLSLTVYAGPKDLDTLRGYGR-----GFESAIDYGAVAKFFALFARGLLYVMR 347 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + +V N+G+AI+L TV V+L+ FPL K S M+ +QP+I++L+ KF + + Sbjct: 348 WLEAIVRNWGVAIILLTVLVRLVLFPLTYKSMQSMNEMRKLQPEIEKLKAKFGDD-REKM 406 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 A++QLY+ H +NPL GC P+LLQ+PV+FA+Y + S+E+ P + W+KDL A DP Sbjct: 407 NLAVMQLYQKHKVNPLGGCLPMLLQMPVWFALYAALQTSVELYREP-FLWMKDLTAHDPY 465 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMPVVFVFA 530 I PI M +S F+ K+SP PAD QA ++ + P F Sbjct: 466 FIL-------------------PIAMGISSFVMQKLSPQPADNAQAKMMLYFFPGFFTVI 506 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + P GL +Y +N++SIVQQ ++MK Sbjct: 507 MLFVPGGLTLYIFVNNLLSIVQQQLMMK 534 >gi|189461403|ref|ZP_03010188.1| hypothetical protein BACCOP_02058 [Bacteroides coprocola DSM 17136] gi|189431932|gb|EDV00917.1| hypothetical protein BACCOP_02058 [Bacteroides coprocola DSM 17136] Length = 617 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 119/605 (19%), Positives = 230/605 (38%), Gaps = 53/605 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER-------KNIQTVKQPNQVDNSY 53 M+ N V AL ++ + Y P +EM + Q +Q + Sbjct: 1 MD--KNTLVGFALIGAVIVGFG-IYNRPSQKEMARAQHYQDSIQAVAQKQEQMQKAQEIA 57 Query: 54 AAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 A++ + + +L L+N L + + KG + L+ Y+ Sbjct: 58 ASLPVVPDSTSLFFQASQGSEEFTTLENDVLQLTFSNKGGRVCKAMLKEYN---DQQQQP 114 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 + L + + L + NI ++ +T ++L N ++ Sbjct: 115 LVLFDGKDASLS----LGFEGKNENILSNQMYFQTTNVTDSTVT----MRLNAANGGHLD 166 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM----RHKPQTATNTFGVQEGFIAV 223 F + L Y+ + TV + + FSP + M + + + + ++ + ++ Sbjct: 167 FIYKL-LPNSYV--VDFTVQASGLQNF-FSPSVKTMSVDWKQRARQMEKGYTFEQRYTSL 222 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 Y K E W+ ++Y++ VF+ K + + + Sbjct: 223 TYKPVDDSFDYLSETKDEKETIPEVLDWVAFKNQYFSCVFMAEKNFENATLESKIEQKGS 282 Query: 284 RYQAKFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEK---DLAIPRFEMLIDWGWF 339 Y ++A T + F + G F T+ E L+ GW Sbjct: 283 GYMKNYTAEMKTAFDPTGAQPSRFQFYFGPNHFKTLLATNDLSFKDKDQELEDLVYLGWP 342 Query: 340 YFIAKPMFM---LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + L + + + GI I+L T+ VK+L P K ++S+A M+ ++P + Sbjct: 343 IIRLINRWFTINLFDWLSSWGLSMGIVILLMTIIVKILVLPTTWKSFISSAKMRALKPYV 402 Query: 397 DELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 D++ K+ KQ Q+ + LY + ++P+ GC P+L+Q PVF A++ + ++E+R Sbjct: 403 DKINAKYPKQEDALKKQQETMALYSQYGVSPMGGCLPMLIQTPVFMALFFFVPNAIELRQ 462 Query: 456 APFWGWIKDLAAAD-----PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + W DL+A D T+I L L + F ++ + M Q M Sbjct: 463 QS-FLWASDLSAYDDLISWSTHIPLLGNHLSLFCLLFSVT---TVLNQIIMMKQQDMGNN 518 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P ++ MPV+F F + + +GL Y+ S +I I+ IM+ E L+ +L Sbjct: 519 PQMAAMKWMMYIMPVMFFFIFNEYASGLSYYYFISGLIGII-TMWIMRRMTDEKKLLAQL 577 Query: 571 RSTFS 575 + Sbjct: 578 EANKK 582 >gi|60682104|ref|YP_212248.1| putative inner membrane protein translocase component YidC [Bacteroides fragilis NCTC 9343] gi|253567112|ref|ZP_04844563.1| inner membrane protein oxaA [Bacteroides sp. 3_2_5] gi|81314832|sp|Q5LC41|OXAA_BACFN RecName: Full=Inner membrane protein oxaA gi|60493538|emb|CAH08325.1| conserved hypothetical membrane protein [Bacteroides fragilis NCTC 9343] gi|251944236|gb|EES84745.1| inner membrane protein oxaA [Bacteroides sp. 3_2_5] Length = 618 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 123/607 (20%), Positives = 250/607 (41%), Gaps = 62/607 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYA 54 M+ N + L I++ + F P E++ ++ +Q ++ + A Sbjct: 1 MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKRYYDSIAVVQQQEEALRAKTEAA 57 Query: 55 AVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + A S S ++N + +++ KG + L+ Y + + Sbjct: 58 LANEKEETAADSASLFFSATKGKEAFTTIQNNLVEITLDNKGGRVYSALLKNY---MGQD 114 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 V L + S+ A +++ L + + + + ++L +A+ Sbjct: 115 KKPVVLFNGSD------ASMNFNFYNKKGALQTKDFYFEAV--NKTDSSVTMRLAADSAS 166 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 I F T+ D +YL V T + I + E +A Sbjct: 167 YIDFIYTLKPD-NYLMSFVIKATGMDGKLAASTNYVDISWSQRARQIEKGYTYENRLA-- 223 Query: 225 GDKSLVEQKYSDIE-----KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + D++ K + E W+ +++++SVFI ++ + + Sbjct: 224 --DLTYKYTGDDVDNLSASKDDEKSVSERLDWIAFKNQFFSSVFIAEQDFEKTTVKSKME 281 Query: 280 DGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDWG 337 + Y +SA T P T + + G + T+ +K L+ G Sbjct: 282 KQGSGYIKDYSAEMSTFFDPTGKQPTDMYFYFGPNHYKTLTALDKGREEKWELNNLVYLG 341 Query: 338 WFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ ++ F L G + GI ++L T+ VK++ FP K Y+S+A M+ ++P Sbjct: 342 WPLIRWINKWITINVFDWLSGWGLSMGIVLLLLTIMVKIVVFPATWKTYMSSAKMRVLKP 401 Query: 395 KIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 KIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+ Sbjct: 402 KIDEINKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIEL 461 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQMKMSPPPA 512 R + W DL+ D F PF++P H+ ++ ++M+++ + K + Sbjct: 462 RQQS-FLWADDLSTYDAFITF------PFHIPFLGNHLSLFCLLMTVTNILNTKYTMQQQ 514 Query: 513 DKG-------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 D G ++ MP++F+F L+ +P+GL Y+ S +IS+V +I++ E Sbjct: 515 DTGAQPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFISTLISVV-TMIILRRTTDENK 573 Query: 566 LIDRLRS 572 L+ L + Sbjct: 574 LLTELEA 580 >gi|205356681|ref|ZP_03223442.1| putative membrane protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345419|gb|EDZ32061.1| putative membrane protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 403 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 124/412 (30%), Positives = 209/412 (50%), Gaps = 56/412 (13%) Query: 156 IKLVFKNANNILFERTISL--DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 +KL +N + + E+ I+ +Y ++ + N ++P A ++ Sbjct: 34 LKLT-QNLSGLKIEKDITFYPKGNYEIEVKLSKNAN---------YFISPGYRPNIAVDS 83 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + V G + + +++ K D+EK +N S D+Y+A+ Sbjct: 84 YTVH-GALVMDNKETIETYKDGDVEKDESANNVVMTS--AF-DRYYAT------------ 127 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKS-ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 F Y D N+ I+ S + G+KE + + PR E Sbjct: 128 -FFYNFDKPLNVAISKDTNQNPIVFAYSDNEFKAGGYIGSKEHVILRSID-----PRLEA 181 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 ++++GWF FIAKPMF +++ + + N+G AI++ T+ V+++ FPL K +S +K++ Sbjct: 182 VVEYGWFTFIAKPMFEFLNFLHQYIENWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDL 241 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PK+ ++RE++K P Q + M++LYK H NP++GC PILLQIP+FFAIY+V+ ++E Sbjct: 242 APKMKDIRERYKGDP-QKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIE 300 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PP 511 ++ AP+ WI DL+ DP I PI+M +MF+Q ++P Sbjct: 301 LKAAPWAFWIHDLSVMDPYFIL-------------------PILMGATMFLQQLITPITI 341 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D QA I+ ++PV+F F +FPAGL +YW +N+ S+VQQ VI K+ E Sbjct: 342 QDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKIFVKE 393 >gi|53713895|ref|YP_099887.1| putative inner membrane protein translocase component YidC [Bacteroides fragilis YCH46] gi|265764240|ref|ZP_06092808.1| inner membrane protein oxaA [Bacteroides sp. 2_1_16] gi|81690656|sp|Q64T26|OXAA_BACFR RecName: Full=Inner membrane protein oxaA gi|52216760|dbj|BAD49353.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|263256848|gb|EEZ28194.1| inner membrane protein oxaA [Bacteroides sp. 2_1_16] gi|301163574|emb|CBW23125.1| conserved hypothetical membrane protein [Bacteroides fragilis 638R] Length = 618 Score = 278 bits (710), Expect = 3e-72, Method: Composition-based stats. Identities = 123/607 (20%), Positives = 250/607 (41%), Gaps = 62/607 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYA 54 M+ N + L I++ + F P E++ ++ +Q ++ + A Sbjct: 1 MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKRYYDSIAVVQQQEEALRAKTEAA 57 Query: 55 AVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + A S S ++N + +++ KG + L+ Y + + Sbjct: 58 LANEKEETAADSASLFFNATKGKEAFTTIQNNLVEITLDNKGGRVYSALLKNY---MGQD 114 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 V L + S+ A +++ L + + + + ++L +A+ Sbjct: 115 KKPVVLFNGSD------ASMNFNFYNKKGALQTKDFYFEAV--NKTDSSVTMRLAADSAS 166 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 I F T+ D +YL V T + I + E +A Sbjct: 167 YIDFIYTLKPD-NYLMSFVIKATGMDGKLAASTNYVDISWSQRARQIEKGYTYENRLA-- 223 Query: 225 GDKSLVEQKYSDIE-----KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + D++ K + E W+ +++++SVFI ++ + + Sbjct: 224 --DLTYKYTGDDVDNLSASKDDEKSVSERLDWIAFKNQFFSSVFIAEQDFEKTTVKSKME 281 Query: 280 DGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDWG 337 + Y +SA T P T + + G + T+ +K L+ G Sbjct: 282 KQGSGYIKDYSAEMSTFFDPTGKQPTDMYFYFGPNHYKTLTALDKGREEKWELNNLVYLG 341 Query: 338 WFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ ++ F L G + GI ++L T+ VK++ FP K Y+S+A M+ ++P Sbjct: 342 WPLIRWINKWITINVFDWLSGWGLSMGIVLLLLTIMVKIVVFPATWKTYMSSAKMRVLKP 401 Query: 395 KIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 KIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+ Sbjct: 402 KIDEINKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIEL 461 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQMKMSPPPA 512 R + W DL+ D F PF++P H+ ++ ++M+++ + K + Sbjct: 462 RQQS-FLWADDLSTYDAFITF------PFHIPFLGNHLSLFCLLMTVTNILNTKYTMQQQ 514 Query: 513 DKG-------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 D G ++ MP++F+F L+ +P+GL Y+ S +IS+V +I++ E Sbjct: 515 DTGAQPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFISTLISVV-TMIILRRTTDENK 573 Query: 566 LIDRLRS 572 L+ L + Sbjct: 574 LLTELEA 580 >gi|293370211|ref|ZP_06616771.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|292634708|gb|EFF53237.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides ovatus SD CMC 3f] Length = 617 Score = 278 bits (710), Expect = 3e-72, Method: Composition-based stats. Identities = 123/612 (20%), Positives = 242/612 (39%), Gaps = 70/612 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN------------NERKNIQTVKQPNQ 48 M+ N + L I++ + F P E++ +++ K Sbjct: 1 MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKKYYDSIAVVQQQEEALKAKTEAA 57 Query: 49 VDNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + NS V + AL ++ ++N + KG + L+ Y + Sbjct: 58 LANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQD 116 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 +P V L + ++ + A I+ + + + + ++L + Sbjct: 117 KKTP-VMLFDGDDASM----NFNFYNKAGAIQTKD----YFFEAVNKTDSSVTMRLAADS 167 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 A+ I F T+ D YL T ++ K + ++ Sbjct: 168 ASYIDFIYTLKPD-SYLMNFEIKAT---------GMENKLASTKYVDIDWSQRARQLEKG 217 Query: 223 VLGDKSLVEQKYS---------DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + L E Y K N W+ +++++SVFI ++ S Sbjct: 218 FTYENRLSELTYKVTGDNVDNLSAAKDDSQNLPGRIDWVAFKNQFFSSVFIAEQDFDKVS 277 Query: 274 QFKYLSDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFE 331 + + Y +SA T P T + + G F T+ +K Sbjct: 278 VKSKMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELH 337 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 L+ GW F+ ++ F L G + GI +++ T+ VK+L +P K Y+S+A Sbjct: 338 RLVYLGWPLIRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVLVYPATWKTYMSSAK 397 Query: 389 MKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ ++PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + Sbjct: 398 MRVLKPKIDEINKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFV 457 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E+R + W DL+ D I T +PF H+ ++ ++M+L+ + K Sbjct: 458 PSAIELRQQS-FLWADDLSTYD--AIITFPFHIPFLG---NHLSLFCLLMTLTNILNTKY 511 Query: 508 SP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + P ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ Sbjct: 512 TMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRT 570 Query: 561 GAEIGLIDRLRS 572 E L+ L + Sbjct: 571 TDETKLLAILEA 582 >gi|281420428|ref|ZP_06251427.1| inner membrane protein OxaA [Prevotella copri DSM 18205] gi|281405573|gb|EFB36253.1| inner membrane protein OxaA [Prevotella copri DSM 18205] Length = 645 Score = 278 bits (710), Expect = 3e-72, Method: Composition-based stats. Identities = 124/620 (20%), Positives = 257/620 (41%), Gaps = 60/620 (9%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-----------RKNIQTVKQPNQVDNS 52 N N + L +++ + +Y P EE + + K + Sbjct: 2 NKNNIIGFLLIAVVLIGFS-WYNQPSAEEQRAAFVQDSIAKAKHAEMEKASKSAAAKRQT 60 Query: 53 YAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------LD 100 A ++ + AL + ++ LKN + ++N KGA + ++GY D Sbjct: 61 NAKAKVEADSTALFYSALKGQAKKIVLKNEKVELTLNTKGATVEKAVIKGYVGHNLQVKD 120 Query: 101 VSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 S+++ VTL ++ + A+ + T++ P++ T ++ + + L Sbjct: 121 GSADAKDVTLFDGNDQSLKFMLEAKEANIITSDLYFTPSNVTDKSVTMTAVAGEGKTLTL 180 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNN----SIDQIRFSPRGRIMRHKPQTATNTF 214 + ++ + +SL + + + N D+ R RG + ++ T T + Sbjct: 181 TYTLGDDYMLH--MSLQANGMADLFSPNYNKMDVDWSDKARQQERGFMFENRYTTLT--Y 236 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 EG L + S I++ E+ W+ +++++++ + + Sbjct: 237 HNAEGGTDHLNEGS------EKIDEK----IEETIDWVSFKNQFFSAIIVAKDNFEKDAF 286 Query: 275 FKYL-SDGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR--- 329 + + + Y +F A T P + + G +F + + EK+ + Sbjct: 287 MTSIPQEKGSGYLKQFQAKMKTAFDPTGKKASEFEFYFGPNDFQILKNTEKESTFGKDLE 346 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 F+ L+ GW F + F L V GI ++L T+ +KL+ +P+ KK Y+S+A Sbjct: 347 FQKLVYLGWPIIRWINRFFTLYVFDWLSNVFPMGIVLILITLLLKLITYPMVKKSYMSSA 406 Query: 388 NMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++PK++ ++ + Q+ Q+AM+ Y + ++PL+GC P+L+Q+PV+ A++ Sbjct: 407 KMRVLKPKLEAATAQYNKPEDQMQKQQAMMAEYAKYGVSPLSGCLPMLIQMPVWIAMFNF 466 Query: 447 ISISLEMRHAPFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 + ++++R + W+ DL+ DP TNI+ + L F + M++ Sbjct: 467 VPNAIQLR-GEKFLWMNDLSTFDPIFEWNTNIWLIGDHLSLTCILFCVANLLYSWMTMRQ 525 Query: 502 FI-QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 QM K ++ MP++F F + + AGL Y+ S S + K Sbjct: 526 QRDQMVGQQAEQMKMMQWMMYLMPLMFFFMFNDYSAGLNFYYFISLFFSAAIMWTLRKTT 585 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 E L+ L + +N N+ Sbjct: 586 DDE-KLLAILEKRYQENKNN 604 >gi|223937849|ref|ZP_03629749.1| 60 kDa inner membrane insertion protein [bacterium Ellin514] gi|223893455|gb|EEF59916.1| 60 kDa inner membrane insertion protein [bacterium Ellin514] Length = 604 Score = 278 bits (710), Expect = 3e-72, Method: Composition-based stats. Identities = 112/612 (18%), Positives = 234/612 (38%), Gaps = 85/612 (13%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN-IQTVKQPNQVD--------- 50 M+ + + +++ W + N + + NQ Sbjct: 1 MD--RKSISILIVCGALLFLWPVLVNKILPPKPAPPHTNLVSSASSTNQTALGTNQAAIA 58 Query: 51 ------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + V + + N + + + +G ++ L Y VS+ Sbjct: 59 PAQPAFEAGTNVASQFAVNTNQPEETLVVTNDNAVYTFTSRGGGLKEVELLHYPETVSA- 117 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA- 163 L + FA + P + V +++ LT KL Sbjct: 118 ------LRRRAQRTNQFA---------TLNTPAAPPVLSILGNDSLTGDGVFKLSQVPGG 162 Query: 164 --------NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 N + + L +YL + N S ++ SP+ ++ G Sbjct: 163 VHAEKVLTNGLKVVKEFRLGTNYLMSASVRMENQSRQPLQLSPQEVVLGTATPLGIQDNG 222 Query: 216 VQEGFIAVLGDK---------SLVEQKYSDIEKSSISNFHESNS---WLGISDKYWASV- 262 G + +K + K ++ + + ++ W+ + ++++ Sbjct: 223 QVVGMLWYNSNKVASVGPSFFNTNTTKLFFFPRTPETEYRAGSNDVVWVALKNQFFTLAT 282 Query: 263 --------------FIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL 308 ++P S A T+ PG + + Sbjct: 283 MPQIPAPSVVAHLTYLPPPSREEVSSTPKAVAQPTGVTAALEYPGQTLAPGGFVERNYDI 342 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN-LVGNFGIAIMLT 367 F G KE+ T+ + ++++G F I+K + + M++ ++ L ++G+ I+L Sbjct: 343 FTGPKEYKTLARIAARFNND-IDKVMEFGLFSPISKMLLLGMNWLHHRLSVSYGLTIILI 401 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 TV +K++F+PL S M+ +QP+I ++EK+K PQ + + ++ Y+ + +NPL Sbjct: 402 TVLIKIVFWPLTAFSTKSMKRMQALQPQIKAIQEKYK-DEPQKVSQKTMEFYRKNKVNPL 460 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P LLQIPVFF + ++ ++E+R A + W+ DL+ D I F Sbjct: 461 GGCLPALLQIPVFFGFFAMMRGAIELRGA-HFLWMGDLSQPDTIFIIPGFN--------- 510 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + P++M ++M Q+ ++PP D Q ++ +MP++ + + S P+GL +Y++ Sbjct: 511 FPINPMPLLMGVTMLWQISLAPPSPGMDPAQQKMMKFMPLMILLFVYSQPSGLALYYTVQ 570 Query: 546 NVISIVQQAVIM 557 N+++I+Q + Sbjct: 571 NLLTILQTKLTK 582 >gi|237719464|ref|ZP_04549945.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229451324|gb|EEO57115.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 617 Score = 277 bits (709), Expect = 3e-72, Method: Composition-based stats. Identities = 122/612 (19%), Positives = 242/612 (39%), Gaps = 70/612 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN------------NERKNIQTVKQPNQ 48 M+ N + L I++ + F P E++ +++ K Sbjct: 1 MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKKYYDSIAVVQQQEEALKAKTEAA 57 Query: 49 VDNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + NS V + AL ++ ++N + KG + L+ Y + Sbjct: 58 LANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQD 116 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 +P V L + ++ + A I+ + + + + ++L + Sbjct: 117 KKTP-VMLFDGDDASM----NFNFYNKAGAIQTKD----YFFEAVNKTDSSVTMRLAADS 167 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 A+ I F T+ D YL T ++ K + ++ Sbjct: 168 ASYIDFIYTLKPD-SYLMNFEIKAT---------GMEDKLASTKYVDIDWSQRARQLEKG 217 Query: 223 VLGDKSLVEQKYS---------DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + L E Y K + W+ +++++SVFI ++ S Sbjct: 218 FTYENRLSELTYKVTGDNVDNLSAAKDDSQDLPGRIDWVAFKNQFFSSVFIAEQDFDKVS 277 Query: 274 QFKYLSDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFE 331 + + Y +SA T P T + + G F T+ +K Sbjct: 278 VKSKMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELH 337 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 L+ GW F+ ++ F L G + GI +++ T+ VK+L +P K Y+S+A Sbjct: 338 RLVYLGWPLIRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVLVYPATWKTYMSSAK 397 Query: 389 MKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ ++PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + Sbjct: 398 MRVLKPKIDEINKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFV 457 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E+R + W DL+ D I T +PF H+ ++ ++M+L+ + K Sbjct: 458 PSAIELRQQS-FLWADDLSTYD--AIITFPFHIPFLG---NHLSLFCLLMTLTNILNTKY 511 Query: 508 SP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + P ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ Sbjct: 512 TMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRT 570 Query: 561 GAEIGLIDRLRS 572 E L+ L + Sbjct: 571 TDETKLLAILEA 582 >gi|317479120|ref|ZP_07938260.1| YidC/Oxa1 family membrane protein insertase [Bacteroides sp. 4_1_36] gi|316904692|gb|EFV26506.1| YidC/Oxa1 family membrane protein insertase [Bacteroides sp. 4_1_36] Length = 617 Score = 277 bits (709), Expect = 3e-72, Method: Composition-based stats. Identities = 121/604 (20%), Positives = 243/604 (40%), Gaps = 52/604 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 M+ N + L I++ + F P E++ +++ ++ Q Q + Sbjct: 1 MD--KNTITGLVLIAILLVGFS-FLSRPSQEQLEAQQRYYDSIAQVQQREADLKAKAEAA 57 Query: 52 ----SYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 S A +D A + +V ++N +++ KG + L+ Y + Sbjct: 58 LANESGAEASVDSTALFFDARQGTNSQVTIQNNLAEITVDTKGGRIASATLKEY-MGQDK 116 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +P VTL S ++ A ++++ + + + + T ++L + Sbjct: 117 TTP-VTLFSGND------ASMNFLFYNKKETIQTEDYYFTAV--NRTDSTVTMRLSADSN 167 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I F + ++ YL N + I + E +A Sbjct: 168 SYIDFTYRMH-NDTYLIDFTIQAVNMEGKLAATNNYVDIEWSQRARQIEKGYTYENRLAE 226 Query: 224 LGDKSLVE-QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 L K E Y K+ E W+ +++++SVF+ + + Sbjct: 227 LTYKITGEGTDYLSANKNDEKEVPERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQG 286 Query: 283 ARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDWGWFY 340 + Y +SA T P T F + G + T+ +K L+ GW Sbjct: 287 SGYIKDYSAEMSTKFDPAGKEPTQLFFYFGPNHYKTLTALDKGRDEKWELNRLVYLGWPL 346 Query: 341 FIAKPMFM---LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + + + + GI ++ T+ VK + FP K Y+S+A M+ ++PKID Sbjct: 347 IRWINKWFTINIFDWLSSWGLSMGIVLLFMTLIVKAVVFPATWKTYMSSAKMRVLKPKID 406 Query: 398 ELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E+ +K+ KQ Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R Sbjct: 407 EINKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQ 466 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG- 515 + W DL+ D F +PF H+ ++ ++M+++ + K D G Sbjct: 467 S-FLWADDLSTYDAFINFPF--HIPFLGS---HLSLFCLLMTVTNILNTKYMMQQQDTGA 520 Query: 516 ------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + MP++F+F L+ +P+GL Y+ S +IS+V +IM+ E L+ + Sbjct: 521 NPQMAAMKWMSYLMPIMFLFILNDYPSGLNYYYFISTLISVV-TTLIMRKTTNEEALLAQ 579 Query: 570 LRST 573 L + Sbjct: 580 LEAN 583 >gi|260174448|ref|ZP_05760860.1| putative inner membrane protein translocase component YidC [Bacteroides sp. D2] gi|315922715|ref|ZP_07918955.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696590|gb|EFS33425.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 617 Score = 277 bits (709), Expect = 4e-72, Method: Composition-based stats. Identities = 121/613 (19%), Positives = 245/613 (39%), Gaps = 72/613 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN------------NERKNIQTVKQPNQ 48 M+ N + L I++ + F P E++ +++ K Sbjct: 1 MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKKYYDSIAVVQQQEEALKAKTEAA 57 Query: 49 VDNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + NS V + AL ++ ++N + KG + L+ Y + Sbjct: 58 LANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQD 116 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 +P+V + N ++ + A I+ + + + + ++L + Sbjct: 117 KKTPVVLFDGDDASMN-----FNFYNKAGAIQTKD----YFFEAVNKTDSSVTMRLAADS 167 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 A+ I F T+ D YL T ++ K + ++ Sbjct: 168 ASYIDFIYTLKPD-SYLMNFEIKAT---------GMEDKLASTKYVDIDWSQRARQLEKG 217 Query: 223 VLGDKSLVEQKYS---------DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + L E Y K N W+ +++++SVFI ++ S Sbjct: 218 FTYENRLSELTYKVTGDNVDNLSAAKDDSQNLPGRIDWVAFKNQFFSSVFIAEQDFDKVS 277 Query: 274 QFKYLSDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFE 331 + + Y +SA T P T + + G F T+ +K+ Sbjct: 278 VKSKMEQQGSGYIKDYSAEMNTFFDPTGKEPTEMYFYFGPNHFKTLKALDKERDEKWELH 337 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 L+ GW F+ ++ F L G + GI +++ T+ VK++ +P K Y+S+A Sbjct: 338 RLVYLGWPLIRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAK 397 Query: 389 MKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ ++PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + Sbjct: 398 MRVLKPKIDEINKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFV 457 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQMK 506 ++E+R + W DL+ D F PF++P H+ ++ ++M+++ + K Sbjct: 458 PSAIELRQQS-FLWADDLSTYDAFITF------PFHIPFLGNHLSLFCLLMTVTNILNTK 510 Query: 507 MSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + P ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ Sbjct: 511 YTMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRR 569 Query: 560 HGAEIGLIDRLRS 572 E L+ L + Sbjct: 570 TTDETKLLAILEA 582 >gi|218677921|ref|ZP_03525818.1| putative inner membrane protein translocase component YidC [Rhizobium etli CIAT 894] Length = 240 Score = 277 bits (709), Expect = 4e-72, Method: Composition-based stats. Identities = 100/239 (41%), Positives = 145/239 (60%) Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 QAL+ SPRV + +L GSINL GA+ DDL L+GYH V +SPI+TL SP+ TK+ YF Sbjct: 2 EQALAKSPRVVIDTAALSGSINLAGARLDDLKLKGYHETVDDSSPIITLFSPAETKDGYF 61 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 EL Y+ + +P T+W G LT TP+ L + N + F RTIS+DE Y+F Sbjct: 62 TELGYIGSDATGSVPGPTTLWTAPEGAKLTEKTPVTLSYTNDKGLTFTRTISVDERYMFT 121 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 + D + N+ S GR+MR+ T + + + EGFI V+GD L+E KYS +EK + Sbjct: 122 VADKIVNSGQAPAALSSYGRVMRYNKPTTPSVYVLHEGFIGVIGDDGLIESKYSAVEKEA 181 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 +S + WLGI+DKYWA+ +P + ++ ++F Y +DG RYQA + + T+ PG+ Sbjct: 182 VSPAKSTGGWLGITDKYWAATIVPPQSAAYEAKFSYFTDGQPRYQADYKDDAFTVAPGQ 240 >gi|315453617|ref|YP_004073887.1| inner-membrane protein, OxaA [Helicobacter felis ATCC 49179] gi|315132669|emb|CBY83297.1| inner-membrane protein, OxaA [Helicobacter felis ATCC 49179] Length = 552 Score = 277 bits (708), Expect = 4e-72, Method: Composition-based stats. Identities = 133/592 (22%), Positives = 237/592 (40%), Gaps = 68/592 (11%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 E N +AIALS + + + F+ P+ ++ Q P+ ++ D Sbjct: 3 ENNLRLILAIALSFLFLAIYTYFFQTPQKTQV-PSISTTQAPSAPSLAQSTPTPQAPLDN 61 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV----TLLSPSNTK 117 ++ + +PS+ I+ G + + L+ + + L+ ++ Sbjct: 62 TPIIA-----HIHSPSIEIEIDALG-RIAQVYLKDKKFTTHKDEGFIDHVKRLMGMNHKP 115 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP------------IKLVFKNANN 165 +L + L L TP + + + Sbjct: 116 LKPLEKLPLLGEGALKPLELRFVDSTLNQEAFHTPYKTSINDLKLTDDTQTLTLTQELSQ 175 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 ++ ++ ++ + + + + + + +P + + + Sbjct: 176 VVVKKILTFHTNLSYDLKVEILPKTSVN---TAYILSNGSRPVADDDGYAFHGVLLG--- 229 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 E+K IE I D FI S + + S F + Sbjct: 230 ---TQEKKLEKIEDGDIKEAKS------FKD----IAFIASVDRYYTSLFFSTTPLATII 276 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 ++ + G K+ + P +I++G F AKP Sbjct: 277 DSQTGTKNPLPFVSLKGNADLHGYIGPKDHRLLEQIS-----PMLTDVIEYGMITFFAKP 331 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F+L+ Y Y N+G AI+L T+ ++++ +PL+ K VS +K++ PK+ EL+EK+K Sbjct: 332 VFLLLDYLYRYTHNWGWAIILLTLIIRIILYPLSYKGMVSMQKIKDLTPKMKELQEKYKS 391 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 P Q LQ M+QLYK H NPL GC P+LLQIPVFFAIY+V+ ++E++ A + WI DL Sbjct: 392 DP-QKLQMHMMQLYKKHGANPLGGCLPLLLQIPVFFAIYRVLYNAVELKSAEWIFWIHDL 450 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 + DP I PI+M +SM+ Q ++P D QA I +P Sbjct: 451 SLMDPYFIL-------------------PILMGISMYAQQVLTPSTITDPTQAKIFKMLP 491 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + F L +FPAGL++YW+ +N+ SI+QQ I +M + + + K Sbjct: 492 LFFTLFLITFPAGLVLYWTINNLFSILQQWGINQMLDRKKAQEIQAHKSVRK 543 >gi|160885689|ref|ZP_02066692.1| hypothetical protein BACOVA_03693 [Bacteroides ovatus ATCC 8483] gi|156108502|gb|EDO10247.1| hypothetical protein BACOVA_03693 [Bacteroides ovatus ATCC 8483] Length = 617 Score = 277 bits (708), Expect = 5e-72, Method: Composition-based stats. Identities = 122/612 (19%), Positives = 242/612 (39%), Gaps = 70/612 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN------------NERKNIQTVKQPNQ 48 M+ N + L I++ + F P E++ +++ K Sbjct: 1 MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKKYYDSIAMVQQQEEALKAKTEAA 57 Query: 49 VDNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + NS V + AL ++ ++N + KG + L+ Y + Sbjct: 58 LANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQD 116 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 +P V L + ++ + A I+ + + + + ++L + Sbjct: 117 KKTP-VMLFDGDDASM----NFNFYNKAGAIQTKD----YFFEAVNKTDSSVTMRLAADS 167 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 A+ I F T+ D YL T ++ K + ++ Sbjct: 168 ASYIDFIYTLKPD-SYLMNFEIKAT---------GMEDKLASTKYVDIDWSQRARQLEKG 217 Query: 223 VLGDKSLVEQKYS---------DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + L E Y K + W+ +++++SVFI ++ S Sbjct: 218 FTYENRLSELTYKVTGDNVDNLSAAKDDSQDLPGRIDWVAFKNQFFSSVFIAEQDFDKVS 277 Query: 274 QFKYLSDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFE 331 + + Y +SA T P T + + G F T+ +K Sbjct: 278 VKSKMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELH 337 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 L+ GW F+ ++ F L G + GI +++ T+ VK+L +P K Y+S+A Sbjct: 338 RLVYLGWPLIRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVLVYPATWKTYMSSAK 397 Query: 389 MKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ ++PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + Sbjct: 398 MRVLKPKIDEINKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFV 457 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E+R + W DL+ D I T +PF H+ ++ ++M+L+ + K Sbjct: 458 PSAIELRQQS-FLWADDLSTYD--AIITFPFHIPFLG---NHLSLFCLLMTLTNILNTKY 511 Query: 508 SP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + P ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ Sbjct: 512 TMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRT 570 Query: 561 GAEIGLIDRLRS 572 E L+ L + Sbjct: 571 TNETKLLAILEA 582 >gi|237714509|ref|ZP_04544990.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406374|ref|ZP_06082923.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294643254|ref|ZP_06721080.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294806447|ref|ZP_06765288.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229445278|gb|EEO51069.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355077|gb|EEZ04168.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292641377|gb|EFF59569.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294446310|gb|EFG14936.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 617 Score = 276 bits (707), Expect = 5e-72, Method: Composition-based stats. Identities = 122/612 (19%), Positives = 243/612 (39%), Gaps = 70/612 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN------------NERKNIQTVKQPNQ 48 M+ N + L I++ + F P E++ +++ K Sbjct: 1 MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKRYYDSIAVVQQQEEALKAKTEAA 57 Query: 49 VDNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + NS V + AL ++ ++N + KG + L+ Y + Sbjct: 58 LANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFATKGGRVYSAMLKDY-MAQD 116 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 +PI+ + N ++ + A I+ + + + + ++L + Sbjct: 117 KKTPIMLFDGDDASMN-----FNFYNKAGAIQTKD----YFFEAVNKTDSSVTMRLAADS 167 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 A+ I F T+ D YL T ++ K + ++ Sbjct: 168 ASYIDFIYTLKPD-SYLMNFEIKAT---------GMEDKLASTKYVDIDWSQRARQLEKG 217 Query: 223 VLGDKSLVEQKYS---------DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + L E Y K + W+ +++++SVFI ++ S Sbjct: 218 FTYENRLSELTYKVTGDNVDNLSAAKDDSQDLPGRIDWVAFKNQFFSSVFIAEQDFDKVS 277 Query: 274 QFKYLSDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFE 331 + + Y +SA T P T + + G F T+ +K Sbjct: 278 VKSKMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELH 337 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 L+ GW F+ ++ F L G + GI +++ T+ VK+L +P K Y+S+A Sbjct: 338 RLVYLGWPLIRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVLVYPATWKTYMSSAK 397 Query: 389 MKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ ++PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + Sbjct: 398 MRVLKPKIDEINKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFV 457 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E+R + W DL+ D I T +PF H+ ++ ++M+L+ + K Sbjct: 458 PSAIELRQQS-FLWADDLSTYD--AIITFPFHIPFLG---NHLSLFCLLMTLTNILNTKY 511 Query: 508 SP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + P ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ Sbjct: 512 TMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRT 570 Query: 561 GAEIGLIDRLRS 572 E L+ L + Sbjct: 571 TDETKLLAILEA 582 >gi|160890337|ref|ZP_02071340.1| hypothetical protein BACUNI_02778 [Bacteroides uniformis ATCC 8492] gi|156860069|gb|EDO53500.1| hypothetical protein BACUNI_02778 [Bacteroides uniformis ATCC 8492] Length = 617 Score = 276 bits (707), Expect = 6e-72, Method: Composition-based stats. Identities = 120/604 (19%), Positives = 243/604 (40%), Gaps = 52/604 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 M+ N + L I++ + F P E++ +++ ++ Q Q + Sbjct: 1 MD--KNTITGLVLIAILLVGFS-FLSRPSQEQLEAQQRYYDSIAQVQQREADLKAKAEAA 57 Query: 52 ----SYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 S A +D A + +V ++N +++ KG + L+ Y + Sbjct: 58 LANESGAEASVDSTALFFDARQGTNSQVTIQNNLAEITVDTKGGRIASATLKEY-MGQDK 116 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +P VTL S ++ A ++++ + + + + T ++L + Sbjct: 117 TTP-VTLFSGND------ASMNFLFYNKKETIQTEDYYFTAV--NRTDSTVTMRLSADSN 167 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I F + ++ YL N + I + E +A Sbjct: 168 SYIDFTYRMH-NDTYLIDFTIQAVNMEGKLAATNNYVDIEWSQRARQIEKGYTYENRLAE 226 Query: 224 LGDKSLVE-QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 L K E Y K+ E W+ +++++SVF+ + + Sbjct: 227 LTYKITGEGTDYLSANKNDEKEVPERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQG 286 Query: 283 ARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDWGWFY 340 + Y +SA T P T F + G + T+ +K L+ GW Sbjct: 287 SGYIKDYSAEMSTKFDPAGKEPTQLFFYFGPNHYKTLTALDKGRDEKWELNRLVYLGWPL 346 Query: 341 FIAKPMFM---LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + + + + GI ++ T+ VK + FP K Y+S+A M+ ++PKID Sbjct: 347 IRWINKWFTINIFDWLSSWGLSMGIVLLFMTLIVKAVVFPATWKTYMSSAKMRVLKPKID 406 Query: 398 ELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E+ +K+ KQ Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R Sbjct: 407 EINKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQ 466 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG- 515 + W DL+ D F +PF H+ ++ ++M+++ + K D G Sbjct: 467 S-FLWADDLSTYDAFINFPF--HIPFLGS---HLSLFCLLMTVTNILNTKYMMQQQDTGA 520 Query: 516 ------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + MP++F+F L+ +P+GL Y+ S ++S+V +IM+ E L+ + Sbjct: 521 NPQMAAMKWMSYLMPIMFLFILNDYPSGLNYYYFISTLVSVV-TTLIMRKTTNEEALLAQ 579 Query: 570 LRST 573 L + Sbjct: 580 LEAN 583 >gi|225873712|ref|YP_002755171.1| membrane protein [Acidobacterium capsulatum ATCC 51196] gi|225792406|gb|ACO32496.1| membrane protein [Acidobacterium capsulatum ATCC 51196] Length = 605 Score = 276 bits (707), Expect = 6e-72, Method: Composition-based stats. Identities = 124/588 (21%), Positives = 226/588 (38%), Gaps = 61/588 (10%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP-----------NQVDN 51 + + + + I Q F N + K Q + Sbjct: 15 DSRTLLIYAVIFLAIFLGLQYFRSKNAPPAPPNGKHTPAAQKNSPAPSAAPASAPGQTAS 74 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A A + +++P + +G L+ Y D + N P+ + Sbjct: 75 GNAPAAATTPAVLAAAETTTTVESPLYRVTFTNRGGVAKSWILKKYTND-AQNRPLDMVN 133 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK-NANNILFER 170 + + Y L A +L + V + T P L F+ +AN + E+ Sbjct: 134 DKAAQQFGYPLSLYTYDAALTQQLNQAMYVPSATG----TIQAPATLTFRYSANGLTVEK 189 Query: 171 TISLDEHYLFKIVDTVTNNSI--DQIRFSPRGRIMRHKPQTATNTFGVQEGFIA----VL 224 T ++ Y+ + VT N + P G + N QE + Sbjct: 190 TFRFEKSYVLETDVKVTRNGAPVTALLAWPSGFGDQETLPQYQNAQIDQETGAKTGFHLA 249 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 G ++ + + + S + G+SD Y+AS+F+P + + + R Sbjct: 250 GGPNVKQIEPKKV--SGGDTVQGPLDYAGVSDLYFASIFLPPNPDNALMVTLHHALELPR 307 Query: 285 YQAKFSANEITILP-------GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 A +++ +P + + LF G K + E ++ +G Sbjct: 308 DPAHPKTSKMDQVPVLGAAVGSTTGEVHDRLFVGPKALDVLKSIHTAYHF-NLEGIVHYG 366 Query: 338 WFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 ++ +IAKPMF+++ +F+N + N+G AI+L T+ + P + M IQP++ Sbjct: 367 FWGWIAKPMFLVLQFFHNHGIPNWGWAILLLTLILNAAMMPTRVTMMKKSLAMMRIQPQM 426 Query: 397 DELREKFK-----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 D ++ K+ Q + K M+ L K IN AGC P+LLQ P+ Y+++ +++ Sbjct: 427 DAIKAKYAKYKATDPRKQEMNKEMMDLQKREGINMFAGCLPMLLQYPLLIGFYRMLEVTI 486 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 +RHA W W+ DL+A DP I PI + +SMF+ +P P Sbjct: 487 ALRHA-HWMWLPDLSAPDPYYIL-------------------PIFVVVSMFLVQFFTPSP 526 Query: 512 A-DKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 D Q ++ MP F F + +G+ +YW+ N++ + QQ V+ Sbjct: 527 GVDPAQQRMMAFMMPAFFGFMMLHIGSGVALYWAGGNILGVGQQWVMN 574 >gi|298482875|ref|ZP_07001058.1| inner membrane protein OxaA [Bacteroides sp. D22] gi|298271075|gb|EFI12653.1| inner membrane protein OxaA [Bacteroides sp. D22] Length = 617 Score = 276 bits (706), Expect = 8e-72, Method: Composition-based stats. Identities = 120/612 (19%), Positives = 242/612 (39%), Gaps = 70/612 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN------------NERKNIQTVKQPNQ 48 M+ N + L I++ + F P E++ +++ K Sbjct: 1 MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKKYYDSIAVVQQQEEALKAKTEAA 57 Query: 49 VDNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + NS V + AL ++ ++N + KG + L+ Y + Sbjct: 58 LANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQD 116 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 +P V L + ++ + A I+ + + + + ++L + Sbjct: 117 KKTP-VMLFDGDDASM----NFNFYNKAGAIQTKD----YFFEAVNKTDSSVTMRLAADS 167 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 A+ I F T+ D YL T ++ K + ++ Sbjct: 168 ASYIDFIYTLKPD-SYLMNFEIKAT---------GMEDKLASTKYVDIDWSQRARQLEKG 217 Query: 223 VLGDKSLVEQKYS---------DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + L E Y K + W+ +++++SVFI ++ S Sbjct: 218 FTYENRLSELTYKVTGDNVDNLSAAKDDSQDLPGRIDWVAFKNQFFSSVFIAEQDFDKVS 277 Query: 274 QFKYLSDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFE 331 + + Y +SA T P T + + G F T+ +K Sbjct: 278 VKSKMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELH 337 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 L+ GW F+ ++ F L G + GI +++ T+ VK++ +P K Y+S+A Sbjct: 338 RLVYLGWPLIRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAK 397 Query: 389 MKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ ++PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + Sbjct: 398 MRVLKPKIDEISKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFV 457 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E+R + W DL+ D I T +PF H+ ++ ++M+++ + K Sbjct: 458 PSAIELRQQS-FLWADDLSTYD--AIITFPFHIPFLG---NHLSLFCLLMTVTNILNTKY 511 Query: 508 SP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + P ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ Sbjct: 512 TMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRKT 570 Query: 561 GAEIGLIDRLRS 572 E L+ L + Sbjct: 571 TDETKLLAILEA 582 >gi|319902327|ref|YP_004162055.1| protein translocase subunit yidC [Bacteroides helcogenes P 36-108] gi|319417358|gb|ADV44469.1| protein translocase subunit yidC [Bacteroides helcogenes P 36-108] Length = 615 Score = 276 bits (706), Expect = 8e-72, Method: Composition-based stats. Identities = 124/603 (20%), Positives = 241/603 (39%), Gaps = 51/603 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYA 54 M+ N + L I++ + F P E+++ ++ +Q + + + A Sbjct: 1 MD--KNTITGLVLIAILLVGFS-FLSRPSKEQLDAQQRYYDSIAQVQQREADLKAKSEVA 57 Query: 55 AVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 ++ S S + ++N + SI KG L+ Y + Sbjct: 58 LANEGEKKTVDSTSLFFNARQGADSLITIQNNLVALSICTKGGSIFSATLKEY-MGQDKK 116 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +P VTL + + + + + I+ + T ++L +A+ Sbjct: 117 TP-VTLFNGDDVSMNFL----FYNKKETIQT----GDYYFNEVDRTDSTVAMRLSADSAS 167 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 I F + ++ YL N + I + E ++ L Sbjct: 168 YIDFTYAMH-NDTYLIDFTIHAVNMEGKLAATNNYVDIEWAQRAHQIEKGYTYENRLSEL 226 Query: 225 GDKSLVE-QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 K + E Y K+ E W+ +++++SVF+ + + + Sbjct: 227 TYKKMGEGTDYLSANKNDEKEIPEHLDWIAFKNQFFSSVFLADADFEKTKLVSKMEPQGS 286 Query: 284 RYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDWGWFYF 341 Y +SA T P T + + G + T+ +K L+ GW Sbjct: 287 GYIKDYSAEMSTKFDPTGKEATQLYFYFGPNHYKTLTALDKGREEKWELNRLVYLGWPIV 346 Query: 342 IAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + ++ F L G GI ++L T+ VK++ FP K Y+S+A M+ ++PKIDE Sbjct: 347 RQINQWFTINIFDWLSGWGLGMGIVLLLMTLIVKVVVFPATWKTYMSSAKMRVLKPKIDE 406 Query: 399 LREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + +K+ KQ Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R Sbjct: 407 INKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS 466 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-- 515 + W DL+ D F +PF H+ ++ ++M+++ + K D G Sbjct: 467 -FLWADDLSTYDAFINFPF--HIPFLGS---HLSLFCLLMTVTNILNTKYMMQQQDTGAN 520 Query: 516 -----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + MPV+F+F L+ +P+GL Y+ S +IS+V +IM+ E L+ +L Sbjct: 521 PQMAAMKWMSYLMPVMFLFILNDYPSGLNYYYFISTLISVV-TTIIMRKTTNEEKLLAQL 579 Query: 571 RST 573 S Sbjct: 580 ESN 582 >gi|153806660|ref|ZP_01959328.1| hypothetical protein BACCAC_00930 [Bacteroides caccae ATCC 43185] gi|149131337|gb|EDM22543.1| hypothetical protein BACCAC_00930 [Bacteroides caccae ATCC 43185] Length = 617 Score = 276 bits (705), Expect = 9e-72, Method: Composition-based stats. Identities = 120/616 (19%), Positives = 245/616 (39%), Gaps = 72/616 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV----KQPNQVDNSYAAV 56 M+ N + L I++ + F P E++ ++K ++ +Q + A Sbjct: 1 MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKKYYDSIALVQQQEEALKAKTEAA 57 Query: 57 LIDDRAQALSMSP--------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 L +++ +A + + ++ ++N + KG + L+ Y + Sbjct: 58 LANNKKEAATTADSSALFFNAMHGTDSKISIQNNVAEITFATKGGRVYSATLKEY-MAQD 116 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 +PIV + N F + + N + ++L + Sbjct: 117 KKTPIVLFDGDDASMNFNFYNKEGAIQTKDYFFEAVNKT---------DSSVTMRLAADS 167 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 A+ I F T+ D YL T ++ + ++ Sbjct: 168 ASYIDFIYTLKPD-SYLMNFEIKAT---------GMADKLASTNYVDIDWSQRARQLEKG 217 Query: 223 VLGDKSLVEQKY----SDIE-----KSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + L E Y D++ K W+ +++++SVFI ++ S Sbjct: 218 FTYENRLSELTYKVTGDDVDNLSAAKDDSQELQGHIDWVAFKNQFFSSVFIAEQDFDKVS 277 Query: 274 QFKYLSDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFE 331 + + Y +SA T P T + G F T+ +K Sbjct: 278 VKSRMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMHFYFGPNHFKTLKALDKGRTEKWELH 337 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 L+ GW F+ ++ F L G + GI +++ T+ VK++ +P K Y+S+A Sbjct: 338 RLVYLGWPLIRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAK 397 Query: 389 MKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ ++PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + Sbjct: 398 MRVLKPKIDEINKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFV 457 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQMK 506 ++E+R + W DL+ D F PF++P H+ ++ ++M+++ + K Sbjct: 458 PSAIELRQQS-FLWADDLSTYDAFITF------PFHIPFLGNHLSLFCLLMTVTNILNTK 510 Query: 507 MSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + P ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ Sbjct: 511 YTMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRK 569 Query: 560 HGAEIGLIDRLRSTFS 575 E L+ L + Sbjct: 570 TTNETKLLAILEANKK 585 >gi|167762902|ref|ZP_02435029.1| hypothetical protein BACSTE_01266 [Bacteroides stercoris ATCC 43183] gi|167699242|gb|EDS15821.1| hypothetical protein BACSTE_01266 [Bacteroides stercoris ATCC 43183] Length = 615 Score = 276 bits (705), Expect = 1e-71, Method: Composition-based stats. Identities = 125/617 (20%), Positives = 251/617 (40%), Gaps = 64/617 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER----KNIQTVKQPNQVDNSYAAV 56 M+ N + L I++ + F P E++ ++ Q ++ + A Sbjct: 1 MD--KNTITGLVLIAILLVGFS-FLSRPSKEQLAAQQRYYDSIAQVQQREADLKAKAEAA 57 Query: 57 LIDDRAQALSMSP------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 L +D+ + + S +V ++N ++ KG + L+ Y + Sbjct: 58 LANDKEEQTADSTALFFNALQGTDSQVTIQNNLAELTVATKGGRISSATLKEY-MGQDKK 116 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +P VTL S ++ A ++++ + N ++++ T ++L +A+ Sbjct: 117 TP-VTLFSGND------ASMNFLFYNKKETIQTENYYFSVV--NRTDSTVTMRLAADSAS 167 Query: 165 NILFERTISLDEHYLFKIV-------DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 I F+ + ++ YL + + N I +S R R + + Sbjct: 168 YIDFKYAMH-NDTYLVDFTIDAVGMANKLANTDYVDIEWSQRARQIEKGYTYENR---LA 223 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 E + GD + Y K+ E W+ +++++SVF+ Sbjct: 224 ELTYKITGDGT----DYLSAGKNDEKEVAERLDWIAFKNQFFSSVFLADANFEKTKLNSK 279 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTN-FLFAGAKEFPTIHHYEKDLAIP-RFEMLID 335 L + Y +SA T T T F + G + T+ +K L+ Sbjct: 280 LETQGSGYIKDYSAEMSTAFDPTGKTPTQLFFYFGPNHYKTLTALDKGRENKWELNRLVY 339 Query: 336 WGWFYFIAKPMFM---LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 GW + + + + + GI ++L T+ VK + FP K Y+S+A M+ + Sbjct: 340 LGWPLIRWINKWFTINIFDWLSSWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVL 399 Query: 393 QPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++ Sbjct: 400 KPKIDEIGKKYPKQEDAMKKQQEVMALYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAI 459 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS-------MFIQ 504 E+R + W DL+ D F +PF H+ ++ ++M+++ M Q Sbjct: 460 ELRQQS-FLWADDLSTYDAFINFPF--HIPFLGS---HLSLFCLLMTVTNILNTKFMMQQ 513 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P + MPV+F+F L+ +P+GL Y+ S ++S+V +IM+ E Sbjct: 514 QDTGANPQMAAMKWMSYLMPVMFLFILNDYPSGLNYYYFISTLVSVV-TTIIMRKMTNEE 572 Query: 565 GLIDRLRSTFSKNYNSQ 581 L+ +L + + Sbjct: 573 ALLAQLEANRKDPKKMK 589 >gi|305667728|ref|YP_003864015.1| putative inner membrane protein translocase component YidC [Maribacter sp. HTCC2170] gi|88707565|gb|EAQ99807.1| putative inner membrane protein translocase component YidC [Maribacter sp. HTCC2170] Length = 619 Score = 275 bits (704), Expect = 1e-71, Method: Composition-based stats. Identities = 123/626 (19%), Positives = 243/626 (38%), Gaps = 76/626 (12%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME N + L I+ + + P EE+ ++ + V+ + D + Sbjct: 1 MEEKKFDINSIIGFVLIFGILI-FMFYQNKPTAEEIEAKKAEQEQVEAAAKQDEVQEVKI 59 Query: 58 IDDRAQALSMSPRV--------------------ELKNPSLIGSINLKGAQFDDLNLRGY 97 + S + L+N + I+ KG Q + +R + Sbjct: 60 AEPETINFQDSTAIANYKSTIGAFGYTAPSEAVTTLENELVTLKISNKGGQIVEATMRNF 119 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 V+ +S V L+ N A + ++ + N+ ++ S + Sbjct: 120 ---VTYDSVPVYLVKDGN------ASFGLNFSTSDNRVLNTKDLFFEPSMSNNDNNQVLS 170 Query: 158 LVFKNANNILFERTISLDEH-YLFKIVDT------VTNNSIDQIRFSPRGRIMRHKPQT- 209 + K A + E + + YL V N S + I + + +R Sbjct: 171 MKAKVAPDKYLEYRYEMKPNDYLVDFTIRSQGLNGVIN-SGNPIHLEWKLKGIRQSKSIQ 229 Query: 210 -----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 T+ ++G I+ L + S E+ DI+ WL +++S+ Sbjct: 230 YENRYTRLTYNHEDGKISKLSEGSDDEETEEDIK------------WLSYRQHFFSSILA 277 Query: 265 PSKETSFHSQFKYLSDGH----ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 + A + + + L G ++ + G + + Sbjct: 278 TKENFKKADLSSVNHVEEESRTAGFTKSYDSKIELELNGGELSQNMHWYYGPTDVDVLSD 337 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 Y +L + + WG F +I + +F + +GIAI++ T+ V+L P+ Sbjct: 338 Y-DELGLAD-SIPFGWGIFGWINRYIFTPFYSLLSTYFPYGIAIVIMTILVRLAMSPVTY 395 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 K Y+S A MK ++P+I EL EK+K + + Q+ ++LY ++P++GC P LQ+P+F Sbjct: 396 KSYLSQAKMKVLKPEISELGEKYKDNAMKK-QQETMKLYNKAGVSPMSGCVPAFLQMPIF 454 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +A++ S +R + W DL++ D F +PFY H+ ++PI+ S++ Sbjct: 455 YALFMFFPTSFALRQ-KAFLWADDLSSFDTIYQFPEGFSIPFYGD---HISLFPILASVA 510 Query: 501 MFIQMKMS------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 +F M M+ P I+ MP + +F +++ +GL +Y+ SN+I+I Sbjct: 511 IFFYMMMTTGQNMPQQPGMPNMKFIMYLMPFMMLFFFNNYASGLSLYYFVSNLITIGIML 570 Query: 555 VIMKMHGAEIGLIDRLRSTFSKNYNS 580 VI + + + +++ K Sbjct: 571 VIKRFILDDDKIHAQIQENKQKPKKE 596 >gi|300727271|ref|ZP_07060687.1| putative membrane protein [Prevotella bryantii B14] gi|299775509|gb|EFI72103.1| putative membrane protein [Prevotella bryantii B14] Length = 641 Score = 275 bits (704), Expect = 1e-71, Method: Composition-based stats. Identities = 124/619 (20%), Positives = 248/619 (40%), Gaps = 58/619 (9%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY---------- 53 N N I L +++ + +Y P EE+ +++ + ++ + Sbjct: 2 NKNNITGIVLIALLIIGYG-WYTQPSEEEIKAQQEQLAKQEEAKKKTEKAFKDAEKAKQE 60 Query: 54 -AAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------LD 100 A I + AL + V L N + ++N KGA + ++ Y D Sbjct: 61 AAKAKILEDTTALFHSALNGKAQTVTLHNDKIELTLNTKGATVEKAVIKNYVGHNIQVKD 120 Query: 101 VSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 S + VTL + + A+ + T+ + T ++ P IKL Sbjct: 121 GSKDQDKVTLFDQKDQALKFMLSAKEANIVTSELYFTASEVTDSTVVFTAEAAPGKNIKL 180 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 + + + +S++ +T T + R + R + + AT T+ E Sbjct: 181 SYVLGKDYMLHMQLSVNGMSGIFAPNTNTMDVDWAERCRQQERGFSFENRYATLTYHNTE 240 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G L + +++ E W+ +++++SV I + ++ + Sbjct: 241 GGTDYLNET----------KEAIDEKIEEKVDWVAFKNQFFSSVMIAKNDFQENALMTSI 290 Query: 279 -SDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEML 333 D + Y ++ A T P + + G +F + E + + + L Sbjct: 291 PQDKESGYLKQYQAKLKTFFDPTGKQPSEFDFYYGPNDFRLLQKVESESNFGKDLELQRL 350 Query: 334 IDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + GW F + + F L V GI ++L T+ +K++ +P+ KK Y+S+A M+ Sbjct: 351 VYLGWPLFRIINRWFTLYVFDWLSQVFPMGIVLILITLLLKVITYPMVKKSYMSSAKMRV 410 Query: 392 IQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++PK++E +++ K Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + + Sbjct: 411 LKPKLEEATKQYDKPEDQMKKQQAMMAEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNA 470 Query: 451 LEMRHAPFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 +++R + WI DL+ DP TN++ L + F I+ S Q Sbjct: 471 IQLRGES-FLWINDLSTYDPIFEWGTNLWMLGDHISLTCILFCGAN---ILYSWFTMQQQ 526 Query: 506 KMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 K Q ++ W MP++F F + + AGL Y+ S S + K Sbjct: 527 KDQMVGQQAEQMKMMRWMMLLMPLMFFFMFNDYSAGLNFYYFVSLFFSAAIMWTLRKTTN 586 Query: 562 AEIGLIDRLRSTFSKNYNS 580 E L+ L + + +N + Sbjct: 587 DE-KLLQILEARYKENKTN 604 >gi|299146179|ref|ZP_07039247.1| inner membrane protein OxaA [Bacteroides sp. 3_1_23] gi|298516670|gb|EFI40551.1| inner membrane protein OxaA [Bacteroides sp. 3_1_23] Length = 617 Score = 275 bits (704), Expect = 1e-71, Method: Composition-based stats. Identities = 121/613 (19%), Positives = 243/613 (39%), Gaps = 72/613 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN------------NERKNIQTVKQPNQ 48 M+ N + L I++ + F P E++ +++ K Sbjct: 1 MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKKYYDSIAVVQQQEEALKAKTEAA 57 Query: 49 VDNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + NS V + AL ++ ++N + KG + L+ Y + Sbjct: 58 LANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQD 116 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 +P V L + ++ + A I+ + + + + ++L + Sbjct: 117 KKTP-VMLFDGDDASM----NFNFYNKAGAIQTKD----YFFEAVNKTDSSVTMRLAADS 167 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 A+ I F T+ D YL T ++ K + ++ Sbjct: 168 ASYIDFIYTLKPD-SYLMNFEIKAT---------GMEDKLASTKYVDIDWSQRARQLEKG 217 Query: 223 VLGDKSLVEQKYS---------DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + L E Y K + W+ +++++SVFI ++ S Sbjct: 218 FTYENRLSELTYKVTGDNVDNLSAAKDDSQDLPGRIDWIAFKNQFFSSVFIAEQDFDKVS 277 Query: 274 QFKYLSDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFE 331 + + Y +SA T P T + + G F T+ +K Sbjct: 278 VKSKMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELH 337 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 L+ GW F+ ++ F L G + GI +++ T+ VK+L +P K Y+S+A Sbjct: 338 RLVYLGWPLIRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVLVYPATWKTYMSSAK 397 Query: 389 MKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ ++PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + Sbjct: 398 MRVLKPKIDEINKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFV 457 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQMK 506 ++E+R + W DL+ D F PF++P H+ ++ ++M+++ + K Sbjct: 458 PSAIELRQQS-FLWADDLSTYDAFITF------PFHIPFLGNHLSLFCLLMTVTNILNTK 510 Query: 507 MSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + P ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ Sbjct: 511 YTMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRR 569 Query: 560 HGAEIGLIDRLRS 572 E L+ L + Sbjct: 570 TTDETKLLAILEA 582 >gi|270296905|ref|ZP_06203104.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270272892|gb|EFA18755.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 617 Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats. Identities = 115/604 (19%), Positives = 243/604 (40%), Gaps = 52/604 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 M+ N + L I++ + F P E++ +++ ++ Q Q + Sbjct: 1 MD--KNTITGLVLIAILLVGFS-FLSRPSQEQLEAQQRYYDSIAQVQQREADLKAKAEAA 57 Query: 52 ----SYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 S A +D A + +V ++N +++ KG + L+ Y + Sbjct: 58 LANESGAEASVDSTALFFDARQGTNSQVTIQNNLAEITVDTKGGRIASATLKEY-MGQDK 116 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +P VTL S ++ A ++++ + + + + T ++L + Sbjct: 117 TTP-VTLFSGND------ASMNFLFYNKKETIQTEDYYFTAV--NRTDSTVTMRLSADSN 167 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNTFGVQEGFIA 222 + I F ++ ++ YL N + I + + + + Sbjct: 168 SYIDFTYSMH-NDTYLIDFTIQAVNMEGKLAATNNYVDIEWSQRARQIEKGYTYENRLAE 226 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + Y K+ E W+ +++++SVF+ + + Sbjct: 227 LTYKIAGEGTDYLSANKNDEKEVPERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQG 286 Query: 283 ARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDWGWFY 340 + Y +SA T P T F + G + T+ +K L+ GW Sbjct: 287 SGYIKDYSAEMSTKFDPAGKEPTQLFFYFGPNHYKTLTALDKGRDEKWELNRLVYLGWPL 346 Query: 341 FIAKPMFM---LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + + + + GI ++ T+ VK + FP K Y+S+A M+ ++PKID Sbjct: 347 IRWINKWFTINIFDWLSSWGLSMGIVLLFMTLIVKAVVFPATWKTYMSSAKMRVLKPKID 406 Query: 398 ELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E+ +K+ KQ Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R Sbjct: 407 EINKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQ 466 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG- 515 + W DL+ D F +PF H+ ++ ++M+++ + K D G Sbjct: 467 S-FLWADDLSTYDAFINFPF--HIPFLGS---HLSLFCLLMTVTNILNTKYMMQQQDTGA 520 Query: 516 ------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + MP++F+F L+ +P+GL Y+ S ++S+V +IM+ E L+ + Sbjct: 521 NPQMAAMKWMSYLMPIMFLFILNDYPSGLNYYYFISTLVSVV-TTLIMRKTTNEEALLAQ 579 Query: 570 LRST 573 L + Sbjct: 580 LEAN 583 >gi|295083924|emb|CBK65447.1| protein translocase subunit yidC [Bacteroides xylanisolvens XB1A] Length = 617 Score = 275 bits (703), Expect = 2e-71, Method: Composition-based stats. Identities = 120/612 (19%), Positives = 243/612 (39%), Gaps = 70/612 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN------------NERKNIQTVKQPNQ 48 M+ N + L I++ + F P E++ +++ K Sbjct: 1 MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKRYYDSIAVVQQQEEALKAKTEAA 57 Query: 49 VDNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + NS V + AL ++ ++N + KG + L+ Y + Sbjct: 58 LANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFATKGGRVYSAMLKDY-MAQD 116 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 +PI+ + N ++ + A I+ + + + + ++L + Sbjct: 117 KKTPIMLFDGDDASMN-----FNFYNKAGAIQTKD----YFFEAVNKTDSSVTMRLAADS 167 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 A+ I F T+ D YL T ++ K + ++ Sbjct: 168 ASYIDFIYTLKPD-SYLMNFEIKAT---------GMENKLASTKYVDIDWSQRARQLEKG 217 Query: 223 VLGDKSLVEQKYS---------DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + L E Y K + W+ +++++SVFI ++ S Sbjct: 218 FTYENRLSELTYKVTGDNVDNLSAAKDDSQDLPGRIDWVAFKNQFFSSVFIAEQDFDKVS 277 Query: 274 QFKYLSDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFE 331 + + Y +SA T P T + + G F T+ +K Sbjct: 278 VKSKMEQQGSGYIKDYSAEMNTFFDPTGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELH 337 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 L+ GW F+ ++ F L G + GI +++ T+ VK++ +P K Y+S+A Sbjct: 338 RLVYLGWPLIRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAK 397 Query: 389 MKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ ++PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + Sbjct: 398 MRVLKPKIDEISKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFV 457 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++E+R + W DL+ D I T +PF H+ ++ ++M+++ + K Sbjct: 458 PSAIELRQQS-FLWADDLSTYD--AIITFPFHIPFLG---NHLSLFCLLMTVTNILNTKY 511 Query: 508 SP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + P ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ Sbjct: 512 TMSMQDTGAQPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRKT 570 Query: 561 GAEIGLIDRLRS 572 E L+ L + Sbjct: 571 TDETKLLAILEA 582 >gi|42527897|ref|NP_972995.1| putative inner membrane protein translocase component YidC [Treponema denticola ATCC 35405] gi|81700132|sp|Q73JM1|OXAA_TREDE RecName: Full=Inner membrane protein oxaA gi|41818942|gb|AAS12914.1| inner membrane protein [Treponema denticola ATCC 35405] Length = 582 Score = 274 bits (702), Expect = 2e-71, Method: Composition-based stats. Identities = 122/588 (20%), Positives = 240/588 (40%), Gaps = 38/588 (6%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR--- 61 N +A+ LS+++ W E N +K + + N + A ++ Sbjct: 3 KNTVLAVVLSMLVFGGWLYIQQKYFPTEYNVPQKPVAQAQGQNPTSSEIAVQTSSNQISN 62 Query: 62 --------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + S ++ + KG L+ H S+ + + + Sbjct: 63 SMIEAVADSDYPSREQTYVIETDIIRAVFTNKGGDIISYKLKE-HASAGSDERVEMIENV 121 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE--RT 171 + A L L N K + IKL + + +F + Sbjct: 122 TERNRALSLALGGHDAQAVDLLFNVKEESLSDGRKQIGFYRDIKLKNTDGSETVFTLAKR 181 Query: 172 ISL-DEHYLFKIVDTVTNN-SIDQIRFSPRGRIMRHKPQTATNTFGV---QEGFIAVLGD 226 + Y+F + T+ + + F +R PQ V E Sbjct: 182 YTFIPGDYMFTLEVTIDGKEGMRGLSFGDSAYTLRSAPQIGPEWDKVNDKYEYRALSYFA 241 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 ++ S I ++ SW+ +S KY++ + IP +G + Sbjct: 242 NEKKKEDRS-ITDGKTKAVNDLASWVSVSGKYFSFIIIPKDPIQKMFFSGIKEEGAKLHN 300 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE----KDLAIPRF---EMLIDWGWF 339 ++F + I+ G + ++ G ++ Y + + G+ Sbjct: 301 SQFFISRQPIV-GNAAYDQYRVYIGPSSEKILNSYNSAAANNYGYENLRIDSLAASSGFL 359 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + + + +M FY ++ N+G+A++L T+ ++++FFPL KK +T M+ +QP+I+EL Sbjct: 360 APLERVLKFVMEIFYKIIPNWGVALLLLTLLMRIIFFPLTKKSSEATKRMQELQPQINEL 419 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 ++K+K +P Q L M++ YK NP +GC P+L+Q+P FA++ + + E R A F Sbjct: 420 QQKYKNNP-QKLNAEMVKFYKEAGYNPASGCLPLLIQLPFLFAMFGLFNNYFEFRGASFI 478 Query: 460 -GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP----ADK 514 GWI DL+ D +I +PF + + + PII + S + K++ P + Sbjct: 479 PGWIPDLSVGD--SILKFGFTIPFL--NWTDLRLLPIIYTASQLLHGKLTQTPGQSQQNP 534 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +++ +MP+ F F + P+GL+++W++SN++ ++QQ +I K Sbjct: 535 SMKIMIYFMPLFFFFLFYNAPSGLLLFWTFSNILMLLQQLIINKSMKK 582 >gi|182413290|ref|YP_001818356.1| 60 kDa inner membrane insertion protein [Opitutus terrae PB90-1] gi|177840504|gb|ACB74756.1| 60 kDa inner membrane insertion protein [Opitutus terrae PB90-1] Length = 604 Score = 274 bits (702), Expect = 2e-71, Method: Composition-based stats. Identities = 121/570 (21%), Positives = 230/570 (40%), Gaps = 65/570 (11%) Query: 28 PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL-----SMSPRVELKNPSLIGSI 82 ++ + N + + + A A + V L+N + + Sbjct: 33 QPTPTISTPQTAATGTAPANALPTGTPSAPVPSTAFASVAENDGSATTVTLQNDFIAAHV 92 Query: 83 NLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVW 142 G D+ L+ Y + P V + + A +D+ + T + Sbjct: 93 TDFGGALHDVALKKYPAERDRPEPFV---FNALHADPMLALVDFPGL-------DRQTRF 142 Query: 143 NLISGKILTPTTPIKLVFKNANNILFERTISL-------DEHYLFKIVDTVTNNSIDQIR 195 L+S TPT+ + N + R S+ + Y+ + T N S + Sbjct: 143 ELVSH---TPTSAVYRAVLNGQ-VEVTRHYSVLQAGDKSGDPYVVRHETTFRNLSDQTVT 198 Query: 196 FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS-----------DIEKSSISN 244 + T N G++ GD + E Sbjct: 199 LPRVALSLGTAAPTDANDPGIRLTTGYSNGDDQNFFARSKLEGGNGFFGIGASEPKPQIL 258 Query: 245 FHESNSWLGISDKYWASVFIPSKETS--FHSQFKYL----SDGHARYQAKFSA--NEITI 296 +W +S++++AS+ P + S + K L + Y +A + + Sbjct: 259 TGGPIAWACVSNQFFASILTPDQPGSGLITRRVKLLPMLPDENRNAYGITSAAQFDLTPL 318 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 + G KE+ + + D+ + ++ +G+F F ++ + LM++ + Sbjct: 319 AANAETKLGADFYVGPKEYRRLAN--GDVFKKDQDKVMQFGFFKFFSQILLTLMTWVHGW 376 Query: 357 VGN----FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + +G A+++TT+ +K++F P S M IQP++ +REKFK +P Q LQ Sbjct: 377 FPSAAWAWGWAVVITTLILKIIFVPFTLAASRSAKRMAKIQPEMQAVREKFKDNP-QKLQ 435 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 A ++L+K H +NP+ GC+PIL+ IP F ++++ + E+R P + W DL+A D Sbjct: 436 AATMELFKKHKVNPMGGCFPILITIPFFIGFFQMLQSAAELRFQP-FLWAYDLSAPD--- 491 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFAL 531 T+ I PF + I P++M ++ IQM+++P PA D Q ++ +MP + Sbjct: 492 --TVLHIGPF------PLNIMPLLMGATIVIQMRLTPSPAVDNMQVKMMKFMPYIMTMFC 543 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +F L +Y + + + +I QQ VI +M Sbjct: 544 YTFSCALALYSTVNGIFTIGQQLVINRMKD 573 >gi|329961447|ref|ZP_08299552.1| membrane protein insertase, YidC/Oxa1 family domain protein [Bacteroides fluxus YIT 12057] gi|328531795|gb|EGF58621.1| membrane protein insertase, YidC/Oxa1 family domain protein [Bacteroides fluxus YIT 12057] Length = 616 Score = 274 bits (702), Expect = 2e-71, Method: Composition-based stats. Identities = 120/607 (19%), Positives = 243/607 (40%), Gaps = 59/607 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER----KNIQTVKQPNQVDNSYAAV 56 M+ N + L I++ + F P E++ ++ Q ++ + A Sbjct: 1 MD--KNTITGLVLIAILLVGFS-FLSRPSQEQLEAQQRYYDSIAQVQQREEALKAKSEAA 57 Query: 57 LIDDRAQAL------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 L +++ + + V ++N ++ KG + L+ Y + Sbjct: 58 LANEKETGVVDSTALFFEARKGTASLVTIQNNLAEIKVDTKGGRIASATLKEY-MGQDKT 116 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +P VTL S + A ++++ + + + + T ++L +A+ Sbjct: 117 TP-VTLFSGDD------ASMNFLFYNKKETIQTEDLYFTAV--NRTDSTVTMRLSADSAS 167 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPR-----GRIMRHKPQTATNTFGVQEG 219 I F T+ ++ YL N + + R + T + E Sbjct: 168 YIDFTYTMH-NDTYLVDFTIRAVNMEGKLAATNNYVDIEWAQRARQIEKGYTYENRLSEL 226 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + G+ + Y + W+ +++++SVF+ + + Sbjct: 227 TYKMTGEGT----DYLSANNNDEKEISGRLDWIAFKNQFFSSVFLADADFEKAKIASKME 282 Query: 280 DGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDWG 337 + Y +SA T P T F + G + T+ +K L+ G Sbjct: 283 PQGSGYIKDYSAEMSTRFDPTGKEATQLFFYFGPNHYKTLTALDKGRDEKWELNRLVYLG 342 Query: 338 WFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W + ++ F L G GI ++L T+ VK + FP K Y+S+A M+ ++P Sbjct: 343 WPVVRQINQWFTINIFDWLSGWGLGMGIVLLLMTLIVKAVVFPATWKTYMSSAKMRVLKP 402 Query: 395 KIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 KIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+ Sbjct: 403 KIDEINKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIEL 462 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + W DL+ D F +PF H+ ++ ++M+++ + K D Sbjct: 463 RQQS-FLWADDLSTYDAFINFPF--HIPFLGS---HLSLFCLLMTVTNILNTKYMMQQQD 516 Query: 514 KG-------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 G + MP++F+F L+ +P+GL Y+ S +IS+V +IM+ E L Sbjct: 517 TGANPQMAAMKWMSYLMPIMFLFVLNDYPSGLNYYYFISTLISVV-TTLIMRKTTNEEQL 575 Query: 567 IDRLRST 573 + +L + Sbjct: 576 LAQLEAN 582 >gi|325474885|gb|EGC78071.1| inner membrane protein oxaA [Treponema denticola F0402] Length = 582 Score = 274 bits (701), Expect = 3e-71, Method: Composition-based stats. Identities = 122/588 (20%), Positives = 240/588 (40%), Gaps = 38/588 (6%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR--- 61 N +A+ LS+++ W E N +K + + N + A ++ Sbjct: 3 KNTVLAVVLSMLVFGGWLYIQQKYFPTEYNVPQKPVAQAQGQNPTSSEIAVQTSSNQISN 62 Query: 62 --------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + S ++ + KG L+ H S+ + + + Sbjct: 63 SMIEAVADSDYPSREQTYVIETDIIRAVFTNKGGDIISYKLKE-HASAGSDERVEMIENV 121 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE--RT 171 + A L L N K + IKL + + +F + Sbjct: 122 TERNRALSLALGGHDAQAIDLLFNVKEESLSDGRKQIGFYRDIKLKNTDGSETVFTLAKR 181 Query: 172 ISL-DEHYLFKIVDTVTNN-SIDQIRFSPRGRIMRHKPQTATNTFGV---QEGFIAVLGD 226 + Y+F + T+ + + F +R PQ V E Sbjct: 182 YTFIPGDYMFTLEVTIDGKEGMRGLSFGDSAYTLRSAPQIGPEWDKVNDKYEYRALSYFA 241 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 ++ S I ++ SW+ +S KY++ + IP +G + Sbjct: 242 NEKKKEDRS-ITDGKTKAVNDLASWVSVSGKYFSFIIIPKDPIQKMFFSGIKEEGAKLHN 300 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE----KDLAIPRF---EMLIDWGWF 339 ++F + I+ G + ++ G ++ Y + + G+ Sbjct: 301 SQFFISRQPIV-GNAAYDQYRVYIGPSSEKILNSYNSAAANNYGYENLRIDSLAASSGFL 359 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + + + +M FY ++ N+G+A++L T+ ++++FFPL KK +T M+ +QP+I+EL Sbjct: 360 APLERVLKFVMEIFYKIIPNWGVALLLLTLLMRIIFFPLTKKSSEATKRMQELQPQINEL 419 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 ++K+K +P Q L M++ YK NP +GC P+L+Q+P FA++ + + E R A F Sbjct: 420 QQKYKNNP-QKLNAEMVKFYKEAGYNPASGCLPLLIQLPFLFAMFGLFNNYFEFRGASFI 478 Query: 460 -GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP----ADK 514 GWI DL+ D +I +PF + + + PII + S + K++ P + Sbjct: 479 PGWIPDLSVGD--SILKFGFTIPFL--NWTDLRLLPIIYTASQLLHGKLTQTPGQSQQNP 534 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +++ +MP+ F F + P+GL+++W++SN++ ++QQ +I K Sbjct: 535 SMKIMIYFMPLFFFFLFYNAPSGLLLFWTFSNILMLLQQLIINKSMKK 582 >gi|224023372|ref|ZP_03641738.1| hypothetical protein BACCOPRO_00065 [Bacteroides coprophilus DSM 18228] gi|224016594|gb|EEF74606.1| hypothetical protein BACCOPRO_00065 [Bacteroides coprophilus DSM 18228] Length = 617 Score = 274 bits (701), Expect = 3e-71, Method: Composition-based stats. Identities = 118/605 (19%), Positives = 229/605 (37%), Gaps = 53/605 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V L ++ + Y P EE + +++Q A + Sbjct: 1 MD--KNTLVGFVLIGAVIVGFG-IYNRPSQEEKARAQHYQDSIQQLAIQKEQEALKAQEA 57 Query: 61 RAQAL-------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + + L+N L + + KG + L+ Y + Sbjct: 58 AEKTIRLDSTSMFYQATQGTEQLTTLENDLLQLTFSNKGGRVKKAMLKEY---MDQQKQP 114 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 + L + A L++ N L + N + +S + T ++L N ++ Sbjct: 115 LVLFDGED------ASLNFGFEGKNENLLSENLYFETVSKTDTSVT--MRLNASNGGHLD 166 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM----RHKPQTATNTFGVQEGFIAV 223 F + L+ Y+ S Q FSP + + + + + + ++ + ++ Sbjct: 167 FVYKLLLN-SYMVDFSIQ---ASGMQNFFSPSTKTVSVDWKQRARQMEKGYTFEQRYTSL 222 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 Y K E W+ ++Y++ VFI + + + + Sbjct: 223 TYKPVDDSFDYLSETKDEKETILEVLDWVAFKNQYFSCVFIAEQNFEKATLESKMEQKGS 282 Query: 284 RYQAKFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWF 339 Y + A+ T +NF + G F T+ + E L+ GW Sbjct: 283 GYMKNYQADMQTAFDPTGAKPSNFQFYFGPNHFKTLLASNDLSFKDKDLELEDLVYLGWP 342 Query: 340 YFIAKPMFM---LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + L + + + G+ I+L T+ VK+L P K ++S+A M+ ++P + Sbjct: 343 IIRLINRWFTINLFDWLSSWGLSMGMVILLMTIIVKILVLPTTWKSFISSAKMRALKPYV 402 Query: 397 DELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 D++ K+ KQ Q+ + LY + ++P+ GC P+LLQ PVF A++ + ++E+R Sbjct: 403 DKINAKYPKQEDALKKQQETMALYSQYGVSPMGGCLPMLLQTPVFMALFFFVPNAIELRQ 462 Query: 456 APFWGWIKDLAAAD-----PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + W DL++ D T+I L L + F +I + M Q M Sbjct: 463 QS-FLWASDLSSYDDLISWSTSIPLLGNHLSLFCLLF---SATTVINQIVMMKQQDMGNN 518 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P ++ MP++F F + + +GL Y+ S +I I+ IM+ E L+ +L Sbjct: 519 PQMAAMKWMMYIMPLMFFFIFNEYASGLSYYYFISGLIGIL-TMWIMRRMTDEKKLLAQL 577 Query: 571 RSTFS 575 + Sbjct: 578 EANKK 582 >gi|189466153|ref|ZP_03014938.1| hypothetical protein BACINT_02523 [Bacteroides intestinalis DSM 17393] gi|189434417|gb|EDV03402.1| hypothetical protein BACINT_02523 [Bacteroides intestinalis DSM 17393] Length = 616 Score = 274 bits (700), Expect = 4e-71, Method: Composition-based stats. Identities = 123/608 (20%), Positives = 241/608 (39%), Gaps = 61/608 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYA 54 M+ N + L I++ + F P E++ ++ +Q ++ + A Sbjct: 1 MD--KNTITGLVLIAILLVGFS-FLSRPSKEQLEAQQRYYDSIALVQQREEALKAKADAA 57 Query: 55 AVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 D S S + ++N +++ KG L+ Y ++ Sbjct: 58 LANEKDVETVDSTSLFFNALQGTDSLITIQNDVAELTLSTKGGSIFSAVLKEY-MEQDKK 116 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +P VTL + ++ + + + I+ + + + T ++L +A+ Sbjct: 117 TP-VTLFTGNDVSMNFL----FYNKKETIQTKD----YYFTTVNRTDSTVTMRLSADSAS 167 Query: 165 NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPR-----GRIMRHKPQTATNTFGVQE 218 I F+ +L + YL + + + R + + E Sbjct: 168 YIDFK--YALHPNTYLVDFSIEAKGMTDKLAASNNYVDIEWAQRARQIEKGYVYENRLSE 225 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 +GD + Y K E W+ +++++SVFI + + Sbjct: 226 LTYKFMGDGT----DYLSANKDDEKEVPERLDWIAFKNQFFSSVFIADTDFEKTKLVSKM 281 Query: 279 SDGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDW 336 + Y +SA T P T F + G + T+ +K + L+ Sbjct: 282 EREGSGYIKDYSAEMSTSFDPTGKQPTQMFFYFGPNHYKTLTALDKGRSEKWELNRLVYL 341 Query: 337 GWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW + ++ F L G + GI ++L T+ VK + FP K Y+S+A M+ ++ Sbjct: 342 GWPLIRWINKWFTINIFDWLSGWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLK 401 Query: 394 PKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PKIDE+ +K+ KQ Q+ M+ +Y + ++P+ GC P+L+Q PV A++ + ++E Sbjct: 402 PKIDEINKKYPKQEDAMKKQQEMMGMYSQYGVSPMGGCLPMLVQFPVLIALFMFVPSAIE 461 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS-------MFIQM 505 +R + W DL+ D F +PF H+ ++ ++M+L M Q Sbjct: 462 LRQQS-FLWADDLSTYDAFINFPF--NIPFLGS---HLSLFCLLMTLVNILNSKFMMQQQ 515 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P + MP++ +F L+S+P+GL Y+ S +IS+V ++ K E Sbjct: 516 DTGANPQMAAMKWMTYLMPIMMLFILNSYPSGLNYYYFISTLISVVTTLILRKTTNEE-K 574 Query: 566 LIDRLRST 573 L+ +L + Sbjct: 575 LLAQLEAR 582 >gi|325297917|ref|YP_004257834.1| Membrane protein oxaA [Bacteroides salanitronis DSM 18170] gi|324317470|gb|ADY35361.1| Membrane protein oxaA [Bacteroides salanitronis DSM 18170] Length = 621 Score = 273 bits (699), Expect = 4e-71, Method: Composition-based stats. Identities = 122/605 (20%), Positives = 235/605 (38%), Gaps = 53/605 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK---------NIQTVKQPNQVDN 51 M+ N V L ++ + Y P EEM + Q Q Q Sbjct: 1 MD--KNTLVGFVLIGAVIVGFS-IYSRPSQEEMERAQHYQDSIETVVRQQEQMQKAQEAE 57 Query: 52 SYAAVLIDDRAQ----ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + + +D +Q L+N + + + KG + L+ Y+ P+ Sbjct: 58 AVQTLRLDSTSQFFAHTQGSEEFTVLENNVVQLTFSNKGGRVSKAMLKEYND--QQKQPL 115 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 V + N + NI ++ +T ++L +N ++ Sbjct: 116 VLFDGEDASLN-----FGFEGKTENIMSSGLYFQPVNVTDTTVT----MRLNAQNGGHLD 166 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR----HKPQTATNTFGVQEGFIAV 223 F + L + Y+ T+ + + FSP + M + + + ++ + ++ Sbjct: 167 FIYRL-LPDSYMLD--FTIQASGLQNF-FSPSVKTMTIDWNQRARQMEKGYNFEQRYTSL 222 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + Y K E+ W+ ++Y++ VF+ K + + + Sbjct: 223 TYKPAGESFDYLSETKDEKETIPEALDWVAFKNQYFSCVFMAEKNFENATLDSKMEQKES 282 Query: 284 RYQAKFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEK---DLAIPRFEMLIDWGWF 339 Y ++ A+ T ++F + G F T+ K D E L+ GW Sbjct: 283 GYMKRYHADMQTAFDPTGAQPSHFQFYFGPNHFKTLLASNKLSFDNKDQELEDLVYLGWP 342 Query: 340 YFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + ++ F L G + GI I+L T+ VK+L P K ++S+A M+ ++P + Sbjct: 343 IIRLINRWFTINLFDWLSGMGLSMGIVILLMTIIVKILVLPTTWKSFISSAKMRALKPYV 402 Query: 397 DELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 D++ EK+ KQ Q+ + LY + ++P+ GC P+L+Q PVF A++ + ++E+R Sbjct: 403 DKINEKYPKQEDALKKQQETMSLYSQYGVSPMGGCLPMLIQTPVFMALFFFVPNAIELRQ 462 Query: 456 APFWGWIKDLAAAD-----PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + W DL+A D T+I L L + F +I + M Q Sbjct: 463 QS-FLWADDLSAYDDLIHWSTSIPLLGNHLSLFCLLF---SATTVINQIVMMKQQDTGAN 518 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P ++ MPV+F F + + +GL Y+ S ++ I+ +M+ E L+ +L Sbjct: 519 PQMAAMKWMMYIMPVMFFFIFNEYASGLSYYYFISGLLGIL-TLWVMRRMTDEKKLLAQL 577 Query: 571 RSTFS 575 + Sbjct: 578 DANKK 582 >gi|317503117|ref|ZP_07961189.1| inner membrane protein OxaA [Prevotella salivae DSM 15606] gi|315665767|gb|EFV05362.1| inner membrane protein OxaA [Prevotella salivae DSM 15606] Length = 644 Score = 273 bits (698), Expect = 6e-71, Method: Composition-based stats. Identities = 129/622 (20%), Positives = 254/622 (40%), Gaps = 59/622 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + L ++ + +Y P EE + A + + Sbjct: 1 MD--KNNIIGFLLIAAVLIGFS-WYNQPSAEEQRAAFVKDSIEQVNKSQSEKAAQMEKNK 57 Query: 61 RAQALSMS-----------------PRVELKNPSLIGSINLKGAQFDDLNLRGYH----- 98 R QA R+ LKN + + + KGA + ++GY Sbjct: 58 RQQAEKQKVLSDTTSLFHKALTGNVERIVLKNKKVELTFSSKGAYVEQAVIKGYVGHNIK 117 Query: 99 -LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 + S++ +TL S ++ +Y A+ ++TA +P+ + + Sbjct: 118 VKNGSADKKNLTLFSGADQSISYLLNAKETNINTAELYFVPSEVSDSTVTFIADAGEGKS 177 Query: 156 IKLVFKNANNILFERTISLDEH-YLFK-IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + L ++ + + +S+ LF T+ N D+ R RG ++ AT T Sbjct: 178 LTLKYELGRDYMLHMQMSVQGMAGLFAPGTQTMDVNWKDKARQQERGFSFENR--YATLT 235 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + ++G L + +I+KS E W+ ++++++V I ++ Sbjct: 236 YHKKDGGTDYLNETK------EEIDKS----IEEQIDWVAFKNQFFSAVMIAKNNFQSNA 285 Query: 274 QFKYL-SDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR-- 329 + + + Y ++ A T P + + G +F + EK+ + Sbjct: 286 LMTSIPQEKGSGYLKQYEAKMKTFFDPTGKKASEFEFYYGPNDFRLLQKMEKESQFHKDL 345 Query: 330 -FEMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVS 385 + L+ GW F + + F L N GI ++L T+ +KLL +P+ KK Y+S Sbjct: 346 QMQRLVYLGWPLFRIINRWFTLYVFDFLTSMNINMGIVLILITLLLKLLTYPMVKKSYMS 405 Query: 386 TANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +A M+ ++PK+DE ++F + Q+ Q+AM+ Y + ++PL+GC P+L+Q P++ A++ Sbjct: 406 SAKMRVLKPKLDEATKQFDKPEDQMQKQQAMMAEYAKYGVSPLSGCLPMLIQAPIWIAMF 465 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSL 499 + ++++R + WIKDL+ DP N++ + L F + +M++ Sbjct: 466 NFVPNAIQLRGES-FLWIKDLSTYDPIWEWNHNLWLIGDHLSLTCILFCVANVLYTMMTM 524 Query: 500 SMFI-QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 QM K ++ MP++F F + + AGL Y+ S S + K Sbjct: 525 RQQKDQMVGQQADQMKMMQWMMFLMPIMFFFMFNDYSAGLNFYYFVSLFFSAAIMWALRK 584 Query: 559 MHGAEIGLIDRLRSTFSKNYNS 580 E L+ L + +N + Sbjct: 585 TTNDE-KLLAILEKRYQENKAN 605 >gi|29345999|ref|NP_809502.1| putative inner membrane protein translocase component YidC [Bacteroides thetaiotaomicron VPI-5482] gi|253568600|ref|ZP_04846011.1| inner membrane protein oxaA [Bacteroides sp. 1_1_6] gi|298387394|ref|ZP_06996947.1| inner membrane protein OxaA [Bacteroides sp. 1_1_14] gi|38502986|sp|Q8AA76|OXAA_BACTN RecName: Full=Inner membrane protein oxaA gi|29337893|gb|AAO75696.1| conserved hypothetical protein [Bacteroides thetaiotaomicron VPI-5482] gi|251842673|gb|EES70753.1| inner membrane protein oxaA [Bacteroides sp. 1_1_6] gi|298260063|gb|EFI02934.1| inner membrane protein OxaA [Bacteroides sp. 1_1_14] Length = 618 Score = 273 bits (697), Expect = 7e-71, Method: Composition-based stats. Identities = 118/614 (19%), Positives = 247/614 (40%), Gaps = 73/614 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK---NIQTVKQPNQVDNSYAAVL 57 M+ N + L I++ + P E++ ++K +I V+Q + + Sbjct: 1 MD--KNTITGLVLIGILLVGFSYL-SRPSEEQIAAQKKYYDSIAVVQQQQEALKAKTEAA 57 Query: 58 IDDRAQAL---------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + + + +V ++N + KG + L+ Y Sbjct: 58 LANENKGAAAAADSSALFFNAMHGTDSKVSIQNSVAEITFTTKGGRVYSAMLKEYK--GQ 115 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 + V L + ++ ++ + I+ + + + + ++L N Sbjct: 116 DKTNPVVLFDGDDATMSF----NFYNKQGAIQTKD----YYFEAVNKTDSSVTMRLAADN 167 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 A+ I F T+ YL T G++ + T ++ Sbjct: 168 ASYIDFIYTLK-PNSYLMNFEIKAT---------GMEGKLASTEYVDIDWTQRARQLEKG 217 Query: 223 VLGDKSLVEQKY----------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + L E Y S + + + W+ +++++SVFI ++ + Sbjct: 218 FTYENRLSELTYKVKGDNVDNLSAAKDDEKDLGNTAIDWVAFKNQFFSSVFIADQDFNKV 277 Query: 273 SQFKYLSDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RF 330 S + + Y +SA T P T + + G F T+ +K Sbjct: 278 SVKSRMEQQGSGYIKDYSAEMSTFFDPSGKQPTEMYFYFGPNHFKTLKALDKGRTEKWEL 337 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 L+ GW F+ ++ F L G + GI +++ T+ VK++ +P K Y+S+A Sbjct: 338 NRLVYLGWPLIRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSA 397 Query: 388 NMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+LLQ P+ A++ Sbjct: 398 KMRVLKPKIDEINKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMF 457 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQM 505 + ++E+R + W DL+ D F PF++P H+ ++ ++M+++ + Sbjct: 458 VPSAIELRQQS-FLWADDLSTYDAFITF------PFHIPFLGNHLSLFCLLMTVTNILNT 510 Query: 506 KMSPPPADKG-------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K + D G ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ Sbjct: 511 KYTMTMQDTGAQPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLR 569 Query: 559 MHGAEIGLIDRLRS 572 E L+ L + Sbjct: 570 KTTDETKLLAILEA 583 >gi|254672457|emb|CBA05875.1| 60kDa inner-membrane protein [Neisseria meningitidis alpha275] Length = 298 Score = 272 bits (696), Expect = 1e-70, Method: Composition-based stats. Identities = 96/268 (35%), Positives = 148/268 (55%), Gaps = 25/268 (9%) Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I G + L+AG + I + +L ++ D+G ++ A P+F L++ +N Sbjct: 48 IQNGAKSEASINLYAGPQTTSVIANIADNL-----QLAKDYGKVHWFASPLFWLLNQLHN 102 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Q+AM Sbjct: 103 IIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDD-RMAQQQAM 161 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI DL+ +DP I Sbjct: 162 MQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRSDPYYIL- 220 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 PIIM+ +MF Q ++PPP D QA ++ MP+VF FP Sbjct: 221 ------------------PIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFFP 262 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 AGL++YW +N+++I QQ I + + Sbjct: 263 AGLVLYWVVNNLLTIAQQWHINRSIEKQ 290 >gi|188996900|ref|YP_001931151.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931967|gb|ACD66597.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 515 Score = 272 bits (695), Expect = 1e-70, Method: Composition-based stats. Identities = 135/563 (23%), Positives = 247/563 (43%), Gaps = 67/563 (11%) Query: 7 YFVAIALSVIIV-YAWQNFYVYPRIEEMNNERKNIQTVKQP-NQVDNSYAAVLIDDRAQA 64 +F A+AL +I Q F+ + N ++ + V P Q+ SY VL +R Sbjct: 13 FFGAVALLLISFSLISQYFFKDSTQNQKNQTQQTQREVAAPIKQISGSYDLVLTGERVNT 72 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 ++ V +K + G + Y++D+ S SN + E+ Sbjct: 73 DNLKDLVRIKTKEGYIEFSNIGGRIVSAFDNRYNVDIIPE------FSKSN--KVFPGEI 124 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 L S + KI L + N+ E+T ++++ + Sbjct: 125 ITTDINTTKLLNFSKYESKIQDNKI--------LFYLKNENVEVEKTYTINDDNTITVD- 175 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 + ++ + + I + TFG G I DK +++ +DI ++I Sbjct: 176 -IKTKGLENVGLAYLTGITLK----SEGTFG-HNGPIIKT-DKEIIKIN-NDI--NTIQT 225 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 + W G +KY+ + + Y + + +L + Sbjct: 226 IRDKILWAGQENKYFMQIL------------SIKGGINTVYIVPVAKDTTVVLSEIPASF 273 Query: 305 TNFLFAGAKEFPTIHHYEKDLA-----IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 F + G K + + +D+G+F + KP+F+L+ + Y+ V N Sbjct: 274 EGFNYLGPKLYSLLGEITDKYQKLWNVDLNLRSSVDFGFFGILGKPLFLLLHFIYDFVHN 333 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G+AI++ TV ++L+ FPL K + M ++ P++++L++K+ + P Q LQ+ +++LY Sbjct: 334 WGLAIIVLTVLLRLVLFPLNHKSLKAMKKMADLAPEMEKLKKKYAKDP-QKLQEEIMKLY 392 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 NP++GC PIL QIP+F A+Y V+ +++E+++APF WIKDL+ DP + Sbjct: 393 AEAGANPMSGCLPILAQIPIFIALYNVLMVTVELKNAPFMLWIKDLSDKDPYYVL----- 447 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 PI+M LSM Q ++P +DK Q MI+ M VF F +FP+GL+ Sbjct: 448 --------------PILMGLSMVAQQFITPS-SDKNQRMIMYIMAGVFTFMFMNFPSGLV 492 Query: 540 IYWSWSNVISIVQQAVIMKMHGA 562 +YW +N++ ++Q +I K Sbjct: 493 LYWLTNNILGLIQSVIINKSMKK 515 >gi|255691546|ref|ZP_05415221.1| inner membrane protein OxaA [Bacteroides finegoldii DSM 17565] gi|260622938|gb|EEX45809.1| inner membrane protein OxaA [Bacteroides finegoldii DSM 17565] Length = 617 Score = 272 bits (695), Expect = 1e-70, Method: Composition-based stats. Identities = 123/619 (19%), Positives = 245/619 (39%), Gaps = 84/619 (13%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER---KNIQTVKQPNQVDNSYAAVL 57 M+ N + L I++ + F P E++ ++ +I V+Q + + Sbjct: 1 MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKRYYDSIALVQQQEEALKAKTEAA 57 Query: 58 IDDRAQAL---------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + + + +V ++N + KG + L+ Y Sbjct: 58 LANSKKEAASAADSSSLFFNALQGTDSKVSIQNNVAEITFTTKGGRVYSAMLKDYMAQDK 117 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 S V L + ++ + I+ + + + ++L + Sbjct: 118 KTS--VVLFDGDDASM----NFNFYNKEGAIQTKD----YFFEVANKTDSSVVMRLAADS 167 Query: 163 ANNILFERTISLDEHYLFKIV-------DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 A+ I F T+ D YL D + N + I +S R R + Sbjct: 168 ASYIDFIYTLKPD-SYLMNFEIKATGMTDKLANTNYVDIDWSQRARQLEK---------- 216 Query: 216 VQEGFIAVLGDKSLVEQKY----SDIE-----KSSISNFHESNSWLGISDKYWASVFIPS 266 + L E Y D++ K W+ +++++SVFI Sbjct: 217 ------GFTYENRLAELTYKIKGDDVDNLSAAKDDSKTLESRIDWVAFKNQFFSSVFIAE 270 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDL 325 ++ S + + Y +SA T P T + + G F T+ +K Sbjct: 271 QDFDKVSVKSRMEQQGSGYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGR 330 Query: 326 AIP-RFEMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKK 381 L+ GW F+ ++ F L G + GI +++ T+ VK++ +P K Sbjct: 331 DEKWELNRLVYLGWPLIRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWK 390 Query: 382 QYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 Y+S+A M+ ++PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+LLQ P+ Sbjct: 391 TYMSSAKMRVLKPKIDEINKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPIL 450 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A++ + ++E+R + W DL+ D I T +PF H+ ++ ++M+++ Sbjct: 451 MALFMFVPSAIELRQQS-FLWADDLSTYD--AIITFPFHIPFLG---NHLSLFCLLMTVT 504 Query: 501 MFIQMKMSPPPADKG-------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + K + D G ++ MP++F+F L+ +P+GL Y+ S +IS+ Sbjct: 505 NILNTKYTMSMQDNGAQPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-T 563 Query: 554 AVIMKMHGAEIGLIDRLRS 572 ++++ E L+ L + Sbjct: 564 MILLRKTTDETKLLAILEA 582 >gi|42525232|ref|NP_970612.1| 60 KD inner-membrane protein [Bdellovibrio bacteriovorus HD100] gi|39577443|emb|CAE81266.1| 60 KD inner-membrane protein [Bdellovibrio bacteriovorus HD100] Length = 539 Score = 272 bits (695), Expect = 1e-70, Method: Composition-based stats. Identities = 136/582 (23%), Positives = 240/582 (41%), Gaps = 66/582 (11%) Query: 1 MERNWN--------YFVAIALSVIIVYAWQNF----YVYPRIEEMNNERKNIQTVKQPNQ 48 M++ N +A+A I+ Y W + Y + E+ + Sbjct: 1 MQQKNNNPSFFDPKTLIAVAAVAIVYYGWNTYLGKKYPDYNKPKTQTEQSSKPATAATTS 60 Query: 49 VDNSYAAVLIDDRAQ---ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + A +D +++ + + +N + + G + Y +N Sbjct: 61 ETPAATANTVDTKSEIMETPTTAKEFHFENDKVSFVMTSFGMGLKGYTINNYQDKEKNNI 120 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 L SNT + S ++ + + ++ +L F N+ Sbjct: 121 K----LGVSNTDGLFEMRWAGDSKPLTFDVAEQAPGHYVGTAQVGETVIKRELKF-NSET 175 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF----GVQEGFI 221 F TIS VTN + D + I A+ +F + F Sbjct: 176 SSFTNTIS------------VTNPTED-FKKGFSLLIPESIHTHASTSFLFPSYEHQDFF 222 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 +S + + +F + S + +S +Y+A+ + E + + Sbjct: 223 VTHNGGKHDTVNFSGATEDVVKDFPAT-SLVSVSSQYFAAAILDKSEIMPEVKLNAQINA 281 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 A+ ++ P +T + +AG K + + P LID+G+F F Sbjct: 282 KTAM-AELVYKPASVKP--EMTFSEVFYAGPKSIDALKAVD-----PEMASLIDFGFFGF 333 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA+P+ +M +++VGN+G AI++ T+ V+L P + S M+ +QP I LRE Sbjct: 334 IARPLLYVMKAAHSVVGNWGFAIIILTLLVRLCVLPFNIMSFKSMKAMQKVQPIIQGLRE 393 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K+ P L + M+ + K + NPL GC P+LLQIPVFFA+Y+VI S+E+ ++PF W Sbjct: 394 KYKEDP-MRLNQEMMAVMKQNGANPLGGCLPMLLQIPVFFALYRVIGSSIELYNSPFILW 452 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I DL++ D + P+ M++ M+IQ K++P D QA I+ Sbjct: 453 ITDLSSHDKFYVL-------------------PVSMAVFMYIQQKITPSTMDPTQAKIMA 493 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++PVVF + PAGL +Y S + I+QQ +IM+ + Sbjct: 494 FLPVVFSLFMLQLPAGLTLYMVVSTLFGIIQQWLIMREPKTK 535 >gi|198275307|ref|ZP_03207838.1| hypothetical protein BACPLE_01468 [Bacteroides plebeius DSM 17135] gi|198271890|gb|EDY96160.1| hypothetical protein BACPLE_01468 [Bacteroides plebeius DSM 17135] Length = 619 Score = 271 bits (694), Expect = 2e-70, Method: Composition-based stats. Identities = 122/611 (19%), Positives = 236/611 (38%), Gaps = 53/611 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ---------PNQVDN 51 M+ N V L ++ + Y P EE + +++Q Q Sbjct: 1 MD--KNTLVGFILIGAVIVGFG-IYNRPSQEERARAQHYQDSIQQVIKQQEEAQEKQAAA 57 Query: 52 SYAAVLIDDRA---QALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + A D + QA + + + +N + + + KG + L+ Y P+ Sbjct: 58 AIEAARPDSTSLFFQAAQGTEQFTVLENELVQLTFSNKGGRVSKALLKEYKD--QKKQPL 115 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 V + N + NI ++ +T ++L N ++ Sbjct: 116 VLFDGEDASMN-----FGFEGKNENILSQQMYFEATNVTDSTVT----MRLNAANGGHLD 166 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM----RHKPQTATNTFGVQEGFIAV 223 F + L Y+ + S Q FSP + M + + + + ++ + ++ Sbjct: 167 FNYRL-LPNSYMVDLTVQ---ASGMQNFFSPSTKSMNIEWKQRARQMEKGYNFEQRYTSL 222 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 Y K ES W+ ++Y++ VF+ + + + + Sbjct: 223 TYKPVDDSFDYLSETKDEKETIPESLDWVAFKNQYFSCVFMAEQNFDNATLESKMEQQGS 282 Query: 284 RYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEK---DLAIPRFEMLIDWGWF 339 Y ++A+ T P + + + G F T+ E L+ GW Sbjct: 283 GYMKNYAADMKTAFDPTGAKASHMQFYFGPNHFKTLLASNDLSFKDKDQELEDLVYLGWP 342 Query: 340 YFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + ++ F L G + G+ I+L T+ VK+L P K ++S+A M+ ++P + Sbjct: 343 IIRLINRWFTINLFDWLSGWGLSMGMVILLMTIIVKVLVLPTTWKSFISSAKMRALKPYV 402 Query: 397 DELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 D++ K+ KQ Q+ + LY+ +N++P+ GC P+LLQ PVF A++ + ++E+R Sbjct: 403 DKINAKYPKQEDALKKQQETMALYRQYNVSPMGGCLPMLLQTPVFMALFFFVPNAIELRQ 462 Query: 456 APFWGWIKDLAAAD-----PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + W DL+A D +I L L + F I ++ + M Q M Sbjct: 463 QG-FLWADDLSAYDDLISWSYHIPLLGNHLSLFCLLF---SITTVLNQIIMMKQQDMGNN 518 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P ++ MPV+F F + + +GL Y+ S +I I+ IM+ E L+ +L Sbjct: 519 PQMAAMKWMMYIMPVMFFFIFNDYASGLSYYYFISGLIGII-TMWIMRRMTDEKKLLAQL 577 Query: 571 RSTFSKNYNSQ 581 + + + Sbjct: 578 EANKKEPSQQK 588 >gi|86140337|ref|ZP_01058896.1| putative inner membrane protein translocase component YidC [Leeuwenhoekiella blandensis MED217] gi|85832279|gb|EAQ50728.1| putative inner membrane protein translocase component YidC [Leeuwenhoekiella blandensis MED217] Length = 621 Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats. Identities = 135/606 (22%), Positives = 261/606 (43%), Gaps = 80/606 (13%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK-------QPNQVDNSYAAVLIDD 60 F+ I ++++ WQN P EE+ ++ + V+ + +Q D + + Sbjct: 14 FLLIG-AILLFMLWQN---QPTEEELAAQKAQEEQVEAQEAAAEKASQTDAVVESTTPQN 69 Query: 61 RAQAL------------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + AL + EL+N L ++ KG + L+ + S Sbjct: 70 DSLALERYKATLGSFAYSATLPSATDDVTELENDVLALKVSNKGGFITEARLKNFK---S 126 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWN-LISGKILTPTTPIKLVFK 161 +S V L+ N++ ST +N L + N + +S + +KL Sbjct: 127 YDSVPVYLIKDGNSRFNL-----TFSTTDNRTLNSENLYFEPSLSKEGENQVLSMKLKVS 181 Query: 162 NANNILFERTISLDEHYL-FKIV----DTVTNNSIDQIRFSPRGRIMRHKPQ-TATNTFG 215 ++ + + T++ D++ + F I V N S I + + RH T N + Sbjct: 182 DSEYLEYRYTLTPDDYMMGFGIKTVGLQNVVNTS-QPINLDWQLKGYRHAKSITYENRYT 240 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFI---PSKETSF 271 E + ++++ + W +++S+ + P E F Sbjct: 241 RLTY--------EYEEGDHDKLDQTGDDDAIETDVDWFNFRQHFFSSILLTDQPFDEVRF 292 Query: 272 HSQFKYLSDG-HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 S+ + Y +++AN + + G ++ +++Y++D+ Sbjct: 293 SSKNLVEDEEVDTVYTKQYAANMTLKPVNGELNYAMDFYYGPTDYQILNNYDRDI----- 347 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNF--GIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + + GW F ++++ +F L+ F GIAI+L T+ +KLL P+ KQY+S Sbjct: 348 DEAMPLGWGIFGVINKYLIIPFFNFLIAYFPAGIAIILLTISIKLLLSPVQYKQYLSQGK 407 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 MK ++P+I+E+ EK+ +P + Q+ ++LY +PL+GC P LLQIPVF+A++ Sbjct: 408 MKVLRPEINEINEKYADNPMKK-QQETMKLYSKAGASPLSGCIPGLLQIPVFYALFTFFP 466 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + +RH + W DL++ D I L +PFY HV ++PI+ S+++FI M M+ Sbjct: 467 SAFALRHKS-FLWADDLSSYD--KIADLPFHIPFYGD---HVSLFPILASIAIFIYMTMT 520 Query: 509 --------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P ++ P++ +F +++ +GL +Y+ SN+I+I VI Sbjct: 521 TGQSMQQTQQPGMPNMKFLMYLSPIMMLFFFNNYASGLSLYYFISNLITIGIMLVIKNFI 580 Query: 561 GAEIGL 566 E + Sbjct: 581 LDEDKI 586 >gi|329955034|ref|ZP_08296015.1| membrane protein insertase, YidC/Oxa1 family domain protein [Bacteroides clarus YIT 12056] gi|328526324|gb|EGF53339.1| membrane protein insertase, YidC/Oxa1 family domain protein [Bacteroides clarus YIT 12056] Length = 615 Score = 271 bits (692), Expect = 3e-70, Method: Composition-based stats. Identities = 122/607 (20%), Positives = 248/607 (40%), Gaps = 62/607 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ------------ 48 M+ N + L +++ + F P E++ +++ ++ Q Q Sbjct: 1 MD--KNTITGLVLIAVLLVGFS-FLSRPSKEQLAAQQRYYDSIAQVQQREADLKAKAEAA 57 Query: 49 VDNSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + N A D A +V ++N ++ KG + L+ Y + Sbjct: 58 LANDKEAQTADSTALFFNALQGTDSQVTIQNNLAELTVATKGGRISSATLKEY-MGQDKK 116 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +P VTL S + A ++++ + + + ++ T ++L +A+ Sbjct: 117 TP-VTLFSGDD------ASMNFLFYNKKETIQTEDYYFTVV--NRTDSTVTMRLSADSAS 167 Query: 165 NILFERTISLDEHYLFKIVDTVTNNS-IDQIRFSPR-----GRIMRHKPQTATNTFGVQE 218 I F + ++ YL + T+ +++ + + R + T + E Sbjct: 168 YIDFNYAMH-NDTYL--VDFTIDATGMANKLASTDYVDIEWSQRARQIEKGYTYENRLSE 224 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + GD + Y K+ E W+ +++++SVF+ + + Sbjct: 225 LTYKITGDGT----DYLSAGKNDEKEVAERLDWIAFKNQFFSSVFLADADFEKTKLNSKM 280 Query: 279 SDGHARYQAKFSANEITILPGKSITTTN-FLFAGAKEFPTIHHYEKDLAIP-RFEMLIDW 336 + Y +SA T T T F + G + T+ +K L+ Sbjct: 281 EAQGSGYIKDYSAEMSTAFDPTGKTPTQLFFYFGPNHYKTLTALDKGREDKWELNRLVYL 340 Query: 337 GWFYFIAKPMFM---LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW + + + + + GI ++L T+ VK + FP K Y+S+A M+ ++ Sbjct: 341 GWPLIRWINKWFTINIFDWLSSWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLK 400 Query: 394 PKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PKIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E Sbjct: 401 PKIDEIGKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIE 460 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS-------MFIQM 505 +R + W DL+ D F +PF H+ ++ ++M+++ M Q Sbjct: 461 LRQQS-FLWADDLSTYDAFINFPF--HIPFLGS---HLSLFCLLMTVTNILNTRFMMQQQ 514 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P + MPV+F+F L+ +P+GL Y+ S +IS+V ++ KM E Sbjct: 515 DTGANPQMAAMKWMSYLMPVMFLFILNDYPSGLNYYYFISTLISVVTTLIMRKMTNEE-A 573 Query: 566 LIDRLRS 572 L+ +L + Sbjct: 574 LLAQLEA 580 >gi|307721586|ref|YP_003892726.1| membrane protein insertase, YidC/Oxa1 family [Sulfurimonas autotrophica DSM 16294] gi|306979679|gb|ADN09714.1| membrane protein insertase, YidC/Oxa1 family [Sulfurimonas autotrophica DSM 16294] Length = 534 Score = 271 bits (692), Expect = 3e-70, Method: Composition-based stats. Identities = 131/591 (22%), Positives = 236/591 (39%), Gaps = 76/591 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N VA+ LS+I + + P E+ + V + + Sbjct: 5 MSPNQRLIVAVLLSIIFFVGYTAIF--PSKEQKVADNAKTDKVTSKTDTKKDVTTRVEEA 62 Query: 61 RAQALSMSPRV---------ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVT 109 A+S ++ +KN + I I+ G + L + + ++ ++ Sbjct: 63 SGHAISQQEKIAQSISNNIVTIKNKNFILKIDTLG-RMSSKELLEDKFRNTDNLHAQVI- 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILF 168 PS + + I + + ++ P+ + + + Sbjct: 121 ---PSTGTKPLYIRF----AEDAINDEATKVPYTANVSEVSLKDKPVTVTLTQKLSALTV 173 Query: 169 ERTISL--DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 + ++ D HY KI + +R + +P+ + V G + D Sbjct: 174 TKVLTFYTDGHYDAKIS------TSKDVRHYIY---LGDRPKVSKKLMAV-AGALIYTDD 223 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + D E + D+Y + I + + D + + Sbjct: 224 DVAHIIEDGDAE---GRQVFQGVKLASSFDQY--TAII---------LYGFTKDTNIIVE 269 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 N + + + G KE + + P I++GWF F AKP+ Sbjct: 270 RGKDDNPVVYFDARK-DENIHGYIGPKEHKILKAID-----PVLTNAIEYGWFTFAAKPL 323 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F ++S+ + + GN+G AI+ T ++ + +PL K VS MK + PK+ EL+EK+K+ Sbjct: 324 FAVLSWLHGIFGNWGWAIIALTALIRAVLYPLTYKGMVSMQKMKELAPKLKELKEKYKKD 383 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 P Q L A +++YK H NPL GC P++LQIPVFFA+Y+ + ++E++ A + WI DL+ Sbjct: 384 P-QRLNAATMEMYKKHGANPLGGCLPMILQIPVFFALYRTLLNAVELQGADWILWINDLS 442 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 DP + PI+M SMFIQ +M+P D Q + ++PV Sbjct: 443 RMDPYYVL-------------------PILMGASMFIQQRMTPNNFTDPMQEKVFKYLPV 483 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +F F +FP+GL++YW +N+ SI QQ ++ + + K Sbjct: 484 IFTFFFVTFPSGLVLYWFTNNLFSIAQQFMVNQQFKNAKDAKVAIEKNSEK 534 >gi|254444960|ref|ZP_05058436.1| 60Kd inner membrane protein [Verrucomicrobiae bacterium DG1235] gi|198259268|gb|EDY83576.1| 60Kd inner membrane protein [Verrucomicrobiae bacterium DG1235] Length = 605 Score = 270 bits (691), Expect = 4e-70, Method: Composition-based stats. Identities = 123/620 (19%), Positives = 242/620 (39%), Gaps = 71/620 (11%) Query: 1 MERNWNYFVAIALSVI--IVYA------WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS 52 M++ N + ++L V+ I+ Q + + + + + + Sbjct: 1 MDK-KNTIIGVSLLVVGTILMFKNSQQRQQQAFEERQAAQESAPAQTAPAQTYDGDTPSP 59 Query: 53 YAAVLIDDRAQAL--------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 A + A+ + V L+N G ++ L+ + Sbjct: 60 SAPIPSATTPTAVVANGHAQIEIDEQKTGEQFVSLENDDFEVRFTNYGGAIKEVELKKHR 119 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 + S V + Y LD + + + N ++++ + + Sbjct: 120 KALDSEENYVM------NRLRYAPALDLTTYLGDAK----NVAFDILPS---SGRDSVSF 166 Query: 159 VFKNANNILFERTISLDEH----YLFKIVDTVT--NNSIDQIRFSPRGRIMRHKPQTATN 212 + RT ++ + F IV + N + + + + + Sbjct: 167 RGVIGEQLEVTRTYTISQDPEGPATFTIVHDLQLRNLTDGLLPLGELLLNIGTVAPSGSQ 226 Query: 213 TFGVQEGFIAVLGDKSLVEQK--------YSDIEKSSISNFHESNSWLGISDKYWASVFI 264 +Q + D +Q + + +S W + ++++ ++ Sbjct: 227 DRFLQTFGYSNGDDVEFTDQSDFMGGGIPFFKKTPKDLVQASDSVVWASVKNQFFITLLT 286 Query: 265 PSKETSFHS-------QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317 P + + + ++ I + G S+T +AG KEF Sbjct: 287 PEEPAAGYIARPVDFPSDAENAEPKTGLTGDVRLAAINLPAGASVTKRFDFYAGPKEFTR 346 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I +K E + +G+F I+K + +M+ +VGN+G+AI+L T+ V+ P Sbjct: 347 IGKLDKGQ-----EQAMQFGFFGIISKFLLQIMNGIQGVVGNWGVAIILLTLIVRGALLP 401 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 + S M +Q + L+EKF Q Q+ M++LYK + INP+AGC P+LLQI Sbjct: 402 ITLLSMKSMKKMSKLQEPMKALKEKFPDD-TQKQQQHMMELYKLNKINPVAGCLPMLLQI 460 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 P+FFA++ ++ + E+R A + WI DL+ D T+ I F + G + + P + Sbjct: 461 PIFFALFYMLRSAAELRFA-DFLWISDLSKPD-----TIATIPNFPILGDFALNLLPFVW 514 Query: 498 SLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +++ QM P P+ D QA ++ +MP +F F +GL++YW+ SNV +I QQ ++ Sbjct: 515 VITLAYQMWTMPTPSVDNAQAKMMKFMPFIFFPFTYMFSSGLVLYWTVSNVFTIGQQWLV 574 Query: 557 MKMHGA-EIGLIDRLRSTFS 575 + E+ L L+ Sbjct: 575 KRGGDEFEVQLPPALKKALE 594 >gi|126661858|ref|ZP_01732857.1| putative inner membrane protein translocase component YidC [Flavobacteria bacterium BAL38] gi|126625237|gb|EAZ95926.1| putative inner membrane protein translocase component YidC [Flavobacteria bacterium BAL38] Length = 628 Score = 270 bits (690), Expect = 5e-70, Method: Composition-based stats. Identities = 123/627 (19%), Positives = 249/627 (39%), Gaps = 70/627 (11%) Query: 1 MERNW---NYFVAIAL--SVIIVYAWQN-------------FYVYPRIEEMNNERKNIQT 42 ME N + L ++I W N V + +E+ I+ Sbjct: 1 MEEKKLDLNSIIGFVLISGILIWMLWSNAPTPEEIKEKEKKEQVEKQAKEVKTITSTIEA 60 Query: 43 VKQPNQVDNSYAAVLIDD----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 + N+ A + + E+KN L I+ KG + + G+ Sbjct: 61 APVADSTKNAAAQAQLGSFGYSATLPSATDAVTEIKNEVLSLKISNKGGYIVEATVLGFD 120 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 +++ V ++ +N A LD ++ ++ ++ + L Sbjct: 121 QFEKNSNKAVKIIKDNN------ASLDITLNTSDNRALHTKDMYFEPKVTTEGKNQVLTL 174 Query: 159 VFKNANNILFERTISLDEH-YLFKIV------DTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 K + E L + Y+ + V N S ++ ++ + + Sbjct: 175 QLKAGPDQFLEYRYVLKPNEYMLDFAIRSQGLEKVVNTSK---PLDLVWQLKTYRNEKSV 231 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS- 270 + D + Y + K S + S++ + S+ + + Sbjct: 232 TYENRYTELVFEYEDG---KDDYLNAAKDSEDEAKD-VSYIAFKQHLFTSILLTDTKFKT 287 Query: 271 ---FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + + F+A ++ + G ++ ++ YE++L Sbjct: 288 AKFNSDNLVDNEEVDTVFTKNFTAQVPLEFKNGALNYNMNWYYGPAKYEILNGYERNLDE 347 Query: 328 PRFEMLIDWGWFYFIAKPMF-MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 M + WG F +I + +F + + L FGIAI+L T+ V+++ P+ K Y+S Sbjct: 348 I---MPLGWGIFGWINRYIFIPVFGFISGLGIGFGIAIVLFTILVRIVMSPVTYKSYLSQ 404 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A MK ++P+I EL EKFK +P + Q+ ++LY +NP+AGC P ++Q+P+F+A+++ Sbjct: 405 AKMKVLRPEIAELNEKFKDNPMKK-QQETMKLYSKAGVNPMAGCLPAVMQMPIFYALFQF 463 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 ++R + W DL++ D +I+ L +PFY HV ++PI+ S+++F MK Sbjct: 464 FPSMFDLRQKS-FLWADDLSSYD--SIYQLPFHIPFYGS---HVSLFPILASIAIFFYMK 517 Query: 507 MS-------------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M+ P K +++ P++ +F +++ +GL +Y+ SN+I+I Sbjct: 518 MTTGDQAMSTPPQEGMPDMGKIMKIMIYISPLMMLFFFNNYASGLSLYYFISNLITIGIM 577 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNS 580 VI E + +++ +K Sbjct: 578 LVIKNYIVKEDKIHAQIQENKTKEKKE 604 >gi|32265611|ref|NP_859643.1| putative inner membrane protein translocase component YidC [Helicobacter hepaticus ATCC 51449] gi|38502920|sp|Q7VJY0|OXAA_HELHP RecName: Full=Inner membrane protein oxaA gi|32261659|gb|AAP76709.1| conserved hypothetical membrane protein [Helicobacter hepaticus ATCC 51449] Length = 591 Score = 270 bits (690), Expect = 5e-70, Method: Composition-based stats. Identities = 136/622 (21%), Positives = 252/622 (40%), Gaps = 92/622 (14%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPR-----IEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 +AI LS+ + F+ ++ Q Q + V Sbjct: 15 RVLIAIGLSIAFFAIYAYFFPQKPHQNTHQAHTAQNTQDTQESIQASTHTEINTQVAPHQ 74 Query: 61 RAQALSMS----------------PRV--ELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 Q + S + + + I+ G + + L+ Sbjct: 75 NIQDSTQSVQNEISSSAQMPHSLKQTIIARVDSDEFELEIDALG-RIKQVYLKDEKFIRH 133 Query: 103 SNSPIVTLLSP----------SNTKNAYFAELDYVS-----TANNIELPNSNTVWNLISG 147 + + ++ K F + + + +I +T + Sbjct: 134 EQTSLFAMIGEVLGMKPAHKEKRDKLPLFGDSQLHTMEMRFSDTSINQQAFDTPYTANIS 193 Query: 148 KILTPTTPIKLVFK-NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK 206 I P+++V N N++ ++ +++ + + + ++ +I+ + Sbjct: 194 YIKLENAPVEIVLTQNLGNLVIKKYLTIHPNLAYDVRLELSKPNIE------YFVSNGMR 247 Query: 207 PQTATNTFGVQEGFIAVLG-DKSLVEQKYSDIEKSSISNFHE---SNSWLGISDKYWASV 262 P T+T+ G I D L + + D ++ S+S++ D+Y+ S+ Sbjct: 248 PTADTDTYA-FRGVITRNNIDGVLTKFEDGDASSDYLAKNAADIRSSSFVASVDRYYTSL 306 Query: 263 FIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 F F G + +A+ + G KE+ + E Sbjct: 307 F-----------FSNAPKGLYVVMSGDNAHNPMPYVRFEGDAEFAGYIGPKEYHELQGIE 355 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 L ++++G F AKP+F+L+ Y Y+L GN+G AI+L T+ V+++ +PL K Sbjct: 356 NTLT-----DVVEYGRITFFAKPLFLLLEYLYDLCGNWGWAIVLLTLIVRIVLYPLTYKG 410 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 VS +K++ PK+ +L+ ++K P Q LQ M+ LYK H NPL GC P++LQIPVFFA Sbjct: 411 MVSMQKLKDLAPKMKDLQTRYKDDP-QKLQIHMMDLYKKHGANPLGGCLPLILQIPVFFA 469 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 IY+V+ ++E++ + + WI DL+A DP + P++M +SM+ Sbjct: 470 IYRVLHNAVELKSSAWILWITDLSAIDPYFVL-------------------PVLMGVSMY 510 Query: 503 IQMKMSPPP-ADKGQAMILNWMPVV--FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 I K++P D Q I +P V F + FPAGL++YW+ +NV SI+QQ I K+ Sbjct: 511 ISQKLTPSNFTDPMQEKIFKMLPWVFTIFFIIFPFPAGLVLYWTINNVFSIIQQISINKI 570 Query: 560 HGAEIGLIDRLRSTFSKNYNSQ 581 + + + + N + Sbjct: 571 MEGKKA--KEIAAHHDEKTNKR 590 >gi|282858704|ref|ZP_06267858.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella bivia JCVIHMP010] gi|282588508|gb|EFB93659.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella bivia JCVIHMP010] Length = 641 Score = 270 bits (690), Expect = 5e-70, Method: Composition-based stats. Identities = 126/618 (20%), Positives = 245/618 (39%), Gaps = 81/618 (13%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN--IQTVKQPNQVDNSYAAVLI 58 M+ N L ++++ + ++ P E++ +RK ++ +V N A L Sbjct: 1 MD--KNTITGFVLMALVLFGF-AWWQQPSKEQLAQQRKQFVADSIAAAKKVQNEKMASLK 57 Query: 59 DDRAQALS--------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------ 98 ++A+ + + + LKN + ++N KG + Y Sbjct: 58 AEQAKQAAIADTTTLFYTALNGQAQDIVLKNDKVALTLNTKGGVVRKAIINNYVGHNIAV 117 Query: 99 LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 D S + VTL + + A+ + T + P++ T + + Sbjct: 118 KDGSKDQKYVTLFDGKDQSLNFALAAKQSNIETKDLYFTPSNQT------------DSTV 165 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTV---------TNN-----SIDQIRFSPRGRI 202 L T +L + YL + TNN D++R RG Sbjct: 166 TLTANAGQGKALILTYTLGKDYLLHLSVQAQGMEGLFNPTNNQLEVEWADKVRQQERGFS 225 Query: 203 MRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASV 262 ++ AT T+ EG L + S EQ E+ W+ ++++++V Sbjct: 226 FENR--YATLTYKKTEGSTDYLNESSEKEQ-----------ITEEATDWVAFKNQFFSAV 272 Query: 263 FIPSKETSFHSQFKYL-SDGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHH 320 I S ++ K + D ++ Y ++ AN T P + F G +F + Sbjct: 273 MISKDNFSTGAKLKSVPQDKNSGYLKQYEANLKTNFDPSGKKPSEFEFFFGPNDFRLLQA 332 Query: 321 YEKDLAIPR---FEMLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLF 375 E + + L+ GW F + + F L + GI ++L T+ +K L Sbjct: 333 IESQSTFGKDLEMQRLVYLGWPLFRIINRWFTIYVFDWLSKLFPMGIVLILITLLLKALT 392 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 +P+ KK Y+S+A M+ ++PK+DE +++ K Q+AM+Q+Y + ++PL+GC P+L Sbjct: 393 YPMVKKSYMSSAKMRVLKPKLDEATKQYNKPEDQMKKQQAMMQMYSEYGVSPLSGCLPML 452 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P++ A++ + ++++R + W+KDL+ DP + + + Sbjct: 453 IQMPIWIAMFNFVPNAIQLRGES-FLWMKDLSTFDPIFEWNHSLWMIGDHISLTCILFCA 511 Query: 495 --IIMSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVI 548 ++ S Q K + Q ++ +M P+ F F + + +GL Y+ S Sbjct: 512 ANLLYSWFTMQQQKDQMVGSQGDQMKMMQYMMLGMPLFFFFVFNDYSSGLNFYYFVSLFF 571 Query: 549 SIVQQAVIMKMHGAEIGL 566 S + K E L Sbjct: 572 SAAIMWGLRKTTNEEKLL 589 >gi|91202840|emb|CAJ72479.1| similar to inner membrane protein YidC [Candidatus Kuenenia stuttgartiensis] Length = 563 Score = 269 bits (689), Expect = 7e-70, Method: Composition-based stats. Identities = 133/587 (22%), Positives = 254/587 (43%), Gaps = 67/587 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY---PRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ +A+ + +I+ + + P+ E++ E + + + + + Sbjct: 1 MD--RKSLIALIICGVIMLLYYPIILPLLSPKTEKVTQEELSAEKRRLETKNEIRTVTPA 58 Query: 58 IDDRAQALSM----SPRVELKNPSLIGS-INLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 + + L V ++N + IN GA + L+ + S ++ + L+ Sbjct: 59 LLPSQETLREMDIHEEEVVIENECIRTVWIN-DGAALKSVKLKDFKSQDSKDT--LELIK 115 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 ++T+ A + Y+ + + I + + +T+ Sbjct: 116 DADTEYRPLA-ISYIYQKADFQRQRYRI--------TDRSKGRISFSTSLESGLNLIKTV 166 Query: 173 SL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA------VLG 225 S+ D Y + + NN+ +I + ++ EG I+ V Sbjct: 167 SIPDGKYQVDMEIVLENNTDAEISLA---------YDIIASSMITHEGVISTDIAGLVGI 217 Query: 226 DKSLVEQKYSDIEKSSISNFHESNS--WLGISDKYWASVFIPS----------KETSFHS 273 D + K +ES W G ++KY+A+V P+ + Sbjct: 218 DMGNHKIKLVSTAPKGFPAKNESRGIVWAGSTNKYFATVLKPASSEWVASVHLQAFDMQG 277 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + I I P S+ F G K+ + Y + + Sbjct: 278 MPSEEKAEQGDFMVSLQTGRIHIAPHTSVRHGYLYFVGPKKEEVLGQYGT------MDAI 331 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I +GW I+K + ++ +N++ N+GI+I++ T+ +K L FPL +K VS M+ +Q Sbjct: 332 ISYGWLNVISKLLLGFLNAVHNVIPNYGISIIVLTIIIKALLFPLTRKSQVSMFRMQQLQ 391 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P I++L+EK+K + Q + + + L+K + +NP++GC P++LQ+PVFFA+++ + +S EM Sbjct: 392 PLINQLKEKYKNNK-QKIGQEQVLLFKKYGVNPMSGCLPMILQLPVFFALFRTLQLSFEM 450 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 R APF WI DL+ D + L +PF + I PIIM+ + F+QMK++P Sbjct: 451 RQAPFVFWINDLSMPD--TLMYLPFTIPFLGNT---LNILPIIMTGASFVQMKLTPKSPA 505 Query: 511 --PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P + Q ++++MP++F F L P+GL +YW+ S + SIV+ Sbjct: 506 TDPQAQAQQKMMSFMPIMFAFILYKMPSGLTLYWTTSTIFSIVESLF 552 >gi|313205343|ref|YP_004044000.1| protein translocase subunit yidc [Paludibacter propionicigenes WB4] gi|312444659|gb|ADQ81015.1| protein translocase subunit yidC [Paludibacter propionicigenes WB4] Length = 632 Score = 269 bits (688), Expect = 9e-70, Method: Composition-based stats. Identities = 134/628 (21%), Positives = 264/628 (42%), Gaps = 70/628 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE-------------MNNERKNIQTVKQPN 47 M+ N L +IV + P +E + + ++ Sbjct: 1 MD--KNTIFGFVLIAVIVLGYMQI-TKPSEKEIAAQKRYNDSIALVQQSKAHVAVKTISE 57 Query: 48 QVDNSYAAVLIDDRAQALS--------MSPRVELKNPSLIGSINLKGAQFDDLNLRGY-- 97 V +S AA + + A L+N + ++ KG + + L+ Y Sbjct: 58 TVSDSVAANDTTNNSGAFGDFSVASKGEEKFYTLENELVKITLGSKGGRIYSVQLKKYSK 117 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG----KILTPT 153 +++ P++ L ++ + T NN + +SN + +SG T Sbjct: 118 RDSLNNAHPLI-LFKEKDSNLGF-----TFVTNNNRVINSSNLYFEPVSGITKDAKGNQT 171 Query: 154 TPIKLVFKNANNILFERTISLDEHYL--FKIV----DTVTNNSIDQIRFSPRGRIMRHKP 207 ++L I F T+ ++ Y+ F I +T+ + + + +I + + Sbjct: 172 LILRLKTTGQAYIDFAYTLPAND-YMLGFGIKAKDMNTIMPTGTNSLDMAWTSKIPQQEK 230 Query: 208 -QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 + + + E + L E K+ W+ D++++S+ I + Sbjct: 231 GRKFEDRYSSIEYKYVADDVEKLSE------SKNDEKKLTNKVKWIAFKDQFFSSILIAN 284 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANE-ITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + + + L ++ Y + AN + P + TT + G + T+ Y+KD Sbjct: 285 EALNSTTLKSTLEGENSGYLKTYDANMSVAFDPTGKVPTTFRWYFGPNHYKTLTAYDKDA 344 Query: 326 AIPR---FEMLIDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 LI GW F F ++ ++F + NFG+ I+L T+ +KL+ FPL Sbjct: 345 KDGHELTLNKLIPLGWGIFGWVNRFAIIPMFNFFNKFISNFGLIILLLTLVIKLVLFPLT 404 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K Y+S+A M+ ++P+IDE+ + P QKA ++LY ++P++GC P LLQ+P+ Sbjct: 405 YKSYMSSAKMRVLKPEIDEINARIPADKPAERQKATMELYGKVGVSPMSGCIPSLLQMPI 464 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 FA++ ++E+R + W DL+A D +I TL +PF HV ++ ++M+ Sbjct: 465 LFAMFSFFPAAIELRQQS-FLWATDLSAYD--SIMTLPFTVPFGFGN--HVSLFCLLMTA 519 Query: 500 SMFIQMKMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + K++ P ++ MPV+F+F +++ +GL Y+ + +ISI+Q Sbjct: 520 TNIVYTKLNMANQSTTDQPGGAVMKWMMYLMPVMFLFIFNNYASGLSYYYFIATLISIIQ 579 Query: 553 QAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 VI + E ++ +L + + N Sbjct: 580 TYVI-RGFVDEKKILAQLHAKRASNSKK 606 >gi|224539444|ref|ZP_03679983.1| hypothetical protein BACCELL_04349 [Bacteroides cellulosilyticus DSM 14838] gi|224518949|gb|EEF88054.1| hypothetical protein BACCELL_04349 [Bacteroides cellulosilyticus DSM 14838] Length = 616 Score = 268 bits (686), Expect = 1e-69, Method: Composition-based stats. Identities = 124/606 (20%), Positives = 238/606 (39%), Gaps = 57/606 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYA 54 M+ N + L I++ + F P E++ ++ +Q ++ + A Sbjct: 1 MD--KNTITGLVLIAILLVGFS-FLSRPSKEQLEAQQRYYDSIALVQQREEALKAKADAA 57 Query: 55 AVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 D S S + ++N +++ KG L+ Y ++ Sbjct: 58 LANEKDVETVDSTSLFFNARQGTDSLITIQNDVAELTLSTKGGSIFSAVLKEY-MEQDKK 116 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +P VTL + ++ + + + I+ + + + T ++L +A+ Sbjct: 117 TP-VTLFTGNDVSMNFL----FYNKKETIQTKD----YYFTTVNRTDSTVTMRLSADSAS 167 Query: 165 NILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPR-----GRIMRHKPQTATNTFGVQE 218 I F+ +L + YL + + + R + + E Sbjct: 168 YIDFK--YALHPNTYLVDFSIDAKGMADKLAASNNYVDIEWAQRARQIEKGYVYENRLSE 225 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 +LG+ + Y K E W+ +++++SVFI + + Sbjct: 226 LTYKMLGNGT----DYLSANKDDEKEVPERLDWIAFKNQFFSSVFIADADFEKTKLVSKM 281 Query: 279 SDGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDW 336 + Y +SA T P T F + G + T+ +K L+ Sbjct: 282 EREGSGYIKDYSAEMSTSFDPTGKQPTQMFFYFGPNHYKTLTALDKGRDEKWELNRLVYL 341 Query: 337 GWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW + ++ F L G + GI ++L T+ VK + FP K Y+S+A M+ ++ Sbjct: 342 GWPLIRWVNKWFTINIFDWLSGWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLK 401 Query: 394 PKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PKIDE+ +K+ KQ Q+ ++ +Y + ++P+ GC P+L+Q PV A++ + ++E Sbjct: 402 PKIDEINKKYPKQEDAMKKQQEVMGMYSQYGVSPMGGCLPMLVQFPVLIALFMFVPSAIE 461 Query: 453 MRHAPFWGWIKDLAAAD-----PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 +R + W DL+ D P NI L L + V I+ S M Q Sbjct: 462 LRQQS-FLWADDLSTYDAFINFPFNIPFLGSHLSLFCLLMTVVN---ILNSKFMMQQQDT 517 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P + MP++ +F L+S+P+GL Y+ S +IS+V ++ K E L+ Sbjct: 518 GANPQMAAMKWMTYLMPIMMLFILNSYPSGLNYYYFISTLISVVTTLILRKTTNEE-KLL 576 Query: 568 DRLRST 573 +L + Sbjct: 577 AQLEAR 582 >gi|333031174|ref|ZP_08459235.1| Membrane protein oxaA [Bacteroides coprosuis DSM 18011] gi|332741771|gb|EGJ72253.1| Membrane protein oxaA [Bacteroides coprosuis DSM 18011] Length = 622 Score = 268 bits (686), Expect = 1e-69, Method: Composition-based stats. Identities = 104/625 (16%), Positives = 240/625 (38%), Gaps = 75/625 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN-----------ERKNIQTVKQPNQV 49 M+ N + L +++ + F+ P E++ + + ++ Sbjct: 1 MD--KNTIIGFVLIGLLLVGFN-FFTRPSEEQVAAMKQYNDSITAVQAEQEAQTEKHTAA 57 Query: 50 DNSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH---LDVS 102 + A + +D + + L+N + + + KG + L+ Y + Sbjct: 58 LSHVAPIKVDSTSLFYNASEGTEQFTTLENDVMKVTFSNKGGRVYSAELKEYKNQGDEKG 117 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 N + L ++ N + + + + + + ++L+ + Sbjct: 118 ENKTNLVLFKDQENS------FNFNFYNQNEVIQSKDYFFTPV--NVSETGLTMRLMADS 169 Query: 163 ANNILFERTISLD----EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 + I F SLD E YL T G++ + + Sbjct: 170 NSYIDF--IYSLDSENKEDYLVNFQIKAT---------GMEGKLAHNDYIDIDWAQRTPQ 218 Query: 219 GFIAVLGDKSLVEQKYSDIEKSS---------ISNFHESNSWLGISDKYWASVFIPSKET 269 + + Y +K + ++ +W+ +++++VFI + Sbjct: 219 HEQGYVFENRHSRLTYRTFDKDTERLTAAEAVTETPEKNLNWIAFRSQFFSTVFITDQGF 278 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + + Y + A T P T +L+ G + T+ + D Sbjct: 279 KNSKLTSTPEEKGSGYIKDYKAEMKTFFDPSGKEATQMYLYLGPNHYKTLKAIDSDKDHK 338 Query: 329 -RFEMLIDWGWFYFIAKPMFM---LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 + ++D GW + + + +L + G+ +++ T+ VK + +P KK Y+ Sbjct: 339 WKLNSVVDLGWPIVKQINQWFTINIFDWLTHLGMSMGVVLLIMTIIVKAIVYPATKKTYM 398 Query: 385 STANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S+A M+ ++P++D + K+ Q Q+ ++ LY + ++P+ GC P+LLQ P+ A+ Sbjct: 399 SSAKMRVLKPQVDAINAKYPNQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMAL 458 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMF 502 + + ++E+R + W DL+ D F PF++P H+ I+ ++M+++ Sbjct: 459 FMFVPSAIELRQES-FLWATDLSTYDALIKF------PFHIPLLGDHLSIFCLLMTVTNI 511 Query: 503 IQMKMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + K + P ++ MP++F+F L+ +P+GL Y+ S +IS++ + Sbjct: 512 LNTKYTMAQQNTGAQPQMPAMKWMMYLMPIMFLFILNDYPSGLCYYYFLSTLISVM-TMI 570 Query: 556 IMKMHGAEIGLIDRLRSTFSKNYNS 580 ++ E L+ +L + + Sbjct: 571 FLRKTTDEEKLLAKLEANKNTEKKK 595 >gi|300776109|ref|ZP_07085968.1| inner membrane protein OxaA [Chryseobacterium gleum ATCC 35910] gi|300505242|gb|EFK36381.1| inner membrane protein OxaA [Chryseobacterium gleum ATCC 35910] Length = 599 Score = 268 bits (685), Expect = 2e-69, Method: Composition-based stats. Identities = 118/598 (19%), Positives = 242/598 (40%), Gaps = 54/598 (9%) Query: 1 MERN----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N ++ A+ ++++ + ++ + +E + + +T + N V + A Sbjct: 1 MQQNNGIDKKQMISFAVLCLVLFGFMFYFQNKQAKEAELKAQEQKTEQAKNAVKQTQATN 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY----HLDVSSNSPIVTLLS 112 + + + L N L + G Q + L Y H +++ P+ L++ Sbjct: 61 INPNVTPNAIQTA--SLGNNELKLEFSSLGGQVSKVELLKYKAYNHKTDNADQPLY-LIT 117 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 +N+ + + T N +L S V + L N + + Sbjct: 118 KNNSNYGFQFKDKTGKTVNTKDLVFSPAV----------NGNAVTLTADY-NGAVIQFIY 166 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 +L Y +R +I + V+ ++S E Sbjct: 167 TLLPKYTLDFK----------VRTQGLSKITSDNKADFIWDYNVRNLEKGRAQEQSHSEF 216 Query: 233 KY-----SDIE---KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 Y D + ++++ E+ +W+G+ ++++SV I +K S+ + Sbjct: 217 SYAFNNYKDYDYDGRTTMDEEKETLNWIGVKQQFFSSV-IEAKNGFTQSKGNQENVEEGE 275 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y KF+ + G + + + P + Y+K+ F+ ++ GW FI Sbjct: 276 YLKKFNYEGFVQMTGSELNQDFTWYFMPLDLPLLKSYDKN-----FDEILPLGW-SFIGA 329 Query: 345 PMFMLMSYFYNLVGNFG----IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + Y+++ +G I + T+ VKL+ P+ KQ+ +A MK I+P+IDE+ Sbjct: 330 MNRYFFMWLYSIIAAWGLSAGWVIFVMTIIVKLILSPIMYKQHKLSAMMKVIRPEIDEVN 389 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 KFK + P Q+A +++Y+ +N +AGC P L+QIP+F+A+++ +++R FW Sbjct: 390 AKFKDADPMKKQQATMEVYRKAGVNQMAGCLPALVQIPIFYALFRFFPNFIDLRGQGFWF 449 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM 518 KDL A D + +I+ ++ M P + Sbjct: 450 -AKDLTAYDDLIKLPFKVPFLGDHLSIFALACTIVILIYTVMTSGNMQQPQQEGMPNMKV 508 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 ++ P+ F+F L++ +GL Y+ SN I+I+ VI + E + +++S K Sbjct: 509 LMYIFPITFLFFLNTSASGLSWYYFVSNAINILIILVIKYVILDEKKIHAQIQSNKEK 566 >gi|255009561|ref|ZP_05281687.1| putative inner membrane protein translocase component YidC [Bacteroides fragilis 3_1_12] gi|313147337|ref|ZP_07809530.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136104|gb|EFR53464.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 618 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 119/607 (19%), Positives = 246/607 (40%), Gaps = 62/607 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYA 54 M+ N + L I++ + F P E++ ++ +Q ++ + A Sbjct: 1 MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKRYYDSIAVVQQQEEALKAKTEAA 57 Query: 55 AVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + A S S ++N + +++ KG + L+ Y + + Sbjct: 58 LANEKEETAADSASLFFNATQGKEAFTTIQNNLVEITLDNKGGRVYSALLKNY---MGQD 114 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 V L + S+ A +++ L + + + + ++L +A+ Sbjct: 115 KKPVVLFNGSD------ASMNFNFYNKKGALQTKDFYFEAV--NKTDSSVTMRLAADSAS 166 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 I F T+ D +YL V T + I + E +A Sbjct: 167 YIDFIYTLKPD-NYLMSFVIKATGMEGKLAATTNYVDISWSQRARQIEKGYTYENRLA-- 223 Query: 225 GDKSLVEQKYSDIE-----KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + D++ K + E W+ +++++SVFI ++ + + Sbjct: 224 --DLTYKYTGDDVDNLSASKDDEKSVPERLDWIAFKNQFFSSVFIAEQDFEKTTVRSKME 281 Query: 280 DGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDWG 337 + Y +SA T P T + + G + T+ +K L+ G Sbjct: 282 KQGSGYIKDYSAEMSTFFDPTGKQPTDMYFYFGPNHYKTLTALDKGREEKWELNNLVYLG 341 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLT---TVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ ++ F L G ++ T+ VK++ FP K Y+S+A M+ ++P Sbjct: 342 WPLIRWINKWITINVFDWLSGWGLGMGVVLLLLTIMVKVVVFPATWKTYMSSAKMRVLKP 401 Query: 395 KIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 KIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+ Sbjct: 402 KIDEINKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLVQFPILMALFMFVPSAIEL 461 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQMKMSPPPA 512 R + W DL+ D F PF++P H+ ++ ++M+++ + K + Sbjct: 462 RQQS-FLWADDLSTYDAFITF------PFHIPFLGNHLSLFCLLMTITNILNTKYTMQQQ 514 Query: 513 DKG-------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 D G ++ MP++F+F L+ +P+GL Y+ S +IS+V +I++ E Sbjct: 515 DTGAQPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFISTLISVV-TMIILRRTTDEDK 573 Query: 566 LIDRLRS 572 L+ L + Sbjct: 574 LLADLEA 580 >gi|317476267|ref|ZP_07935517.1| YidC/Oxa1 family membrane protein insertase [Bacteroides eggerthii 1_2_48FAA] gi|316907541|gb|EFV29245.1| YidC/Oxa1 family membrane protein insertase [Bacteroides eggerthii 1_2_48FAA] Length = 615 Score = 268 bits (684), Expect = 3e-69, Method: Composition-based stats. Identities = 118/592 (19%), Positives = 241/592 (40%), Gaps = 59/592 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY------- 53 M+ N + L I++ + F P E++ +++ ++ Q Q + Sbjct: 1 MD--KNTITGLVLIAILLVGFS-FLSRPNKEQLAAQQRYYDSIAQVQQREADLKAKAEAA 57 Query: 54 -----AAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A D A +V ++N ++ KG + L+ Y + Sbjct: 58 LANNKEAQTTDSTALFFDALQGTDSQVTIQNNLAELTVATKGGRISSATLKEY-MGQDKK 116 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +P VTL S + A ++++ + + + ++ T ++L +A+ Sbjct: 117 TP-VTLFSGDD------ASMNFLFYNKKETIQTEDYYFKVV--DYTDSTATMRLSADSAS 167 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPR-----GRIMRHKPQTATNTFGVQEG 219 I F+ ++ ++ YL +++ + + R + T + E Sbjct: 168 YIDFKYSMH-NDTYLVDFTIDAV-GMANKLASTKYVDIEWSQRARQIEKGYTYENRLSEL 225 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + GD + Y K+ E W+ +++++SVF+ + + Sbjct: 226 TYKITGDGT----DYLSAGKNDEKEVAERLDWIAFKNQFFSSVFLADADFEKTKLSSKME 281 Query: 280 DGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDWG 337 + Y +SA T+ P TT F + G + T+ +K L+ G Sbjct: 282 TQGSGYIKDYSAEMSTVFDPTGEKTTQLFFYFGPNHYKTLTALDKGRTEKWELNRLVYLG 341 Query: 338 WFYFIAKPMFM---LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W + + + + + GI ++L T+ VK + FP K Y+S+A M+ ++P Sbjct: 342 WPLIRWINKWFTINIFDWLSSWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKP 401 Query: 395 KIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 KIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+ Sbjct: 402 KIDEIGKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIEL 461 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS-------MFIQMK 506 R + W DL+ D F +PF H+ ++ ++M+++ M Q Sbjct: 462 RQQS-FLWADDLSTYDAFINFPF--HIPFLGS---HLSLFCLLMTVTNILNTKFMMQQQD 515 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P + MPV+F+F L+ +P+GL Y+ S +IS+V ++ K Sbjct: 516 TGANPQMAAMKWMSYLMPVMFLFILNDYPSGLNYYYFISTLISVVTTLIMRK 567 >gi|255534414|ref|YP_003094785.1| OxaI/YidC membrane insertion protein [Flavobacteriaceae bacterium 3519-10] gi|255340610|gb|ACU06723.1| OxaI/YidC membrane insertion protein [Flavobacteriaceae bacterium 3519-10] Length = 604 Score = 268 bits (684), Expect = 3e-69, Method: Composition-based stats. Identities = 120/604 (19%), Positives = 240/604 (39%), Gaps = 52/604 (8%) Query: 1 MERN----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N ++ AL +I+ ++ + E + Sbjct: 1 MQQNNGLDKNQLISFALFSLILIGAMFYFQNKQATEQQLINAQNPAQTASAATAPATKPA 60 Query: 57 LIDDRAQALSMS--PRVELKNPSLIGSINLKGAQFDDLNL---RGYHLDVSSNSPIVTLL 111 +I + +L + +V+LKN L S++ G Q + L + Y+ +N + L Sbjct: 61 VITNLNDSLKTTSIQQVQLKNKELTLSVSSLGGQISTVQLNEYKAYNRKTDANDKELLLF 120 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 +N+ + + T N +L + T +G +T + N + + Sbjct: 121 DKNNSTYGFQFKDKTGKTFNTKDLVFTPTQ----NGNTVTMQANV-------NGAVIQFI 169 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 +L + Y ++ +++ + T F +E +++ E Sbjct: 170 YTLLDKYTVDF----------NVKTQGLSQLVSDQKATFVWDFNAREMEKGRSQEQTHTE 219 Query: 232 QKYS-------DIE-KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 YS D + ++S+ E+ +WL I +++++V P + + D Sbjct: 220 FNYSFDNYSSFDYDGRTSMEEPDETLNWLAIKQQFFSAVIEPQTGFKNSVGSQEMID-EG 278 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 + F+ N L G + + + P + Y+K+ F+ L+ GW FI Sbjct: 279 EFLKTFNFNGQVDLAGNELNQNFKWYFMPLDLPLLKSYDKN-----FDELLPLGW-SFIG 332 Query: 344 KPMFMLMSYFYNLVGNFG----IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YNL+ ++G I L T+ VK++ P+ KQ+ +A M+ I+P+IDE+ Sbjct: 333 TMNRWFFIPMYNLISSWGIAAGWVIFLMTIIVKIILSPVMFKQHKLSAMMRVIRPEIDEV 392 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 K+K + P Q+ + +Y+ +N +AGC P LLQIP+F+A+++ +++R FW Sbjct: 393 NAKYKDADPMKKQQETMAVYRKAGVNQMAGCLPALLQIPIFYALFRFFPNMIDLRGKSFW 452 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQA 517 KDL A D + +I+ ++ + P Sbjct: 453 F-AKDLTAYDDVIKLPFNIPFLGEHLSIFAIACTVVILIYTVMTSGNIQQPQQEGMPNMK 511 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +++ P+ F+F L++ +GL Y+ SN I+I+ VI E + +++ K Sbjct: 512 VLMYIFPITFLFFLNTGASGLSWYYFVSNAINILIILVIKYWILDEKKIHATIQANKQKE 571 Query: 578 YNSQ 581 + Sbjct: 572 PKKE 575 >gi|218130954|ref|ZP_03459758.1| hypothetical protein BACEGG_02556 [Bacteroides eggerthii DSM 20697] gi|217986826|gb|EEC53158.1| hypothetical protein BACEGG_02556 [Bacteroides eggerthii DSM 20697] Length = 615 Score = 268 bits (684), Expect = 3e-69, Method: Composition-based stats. Identities = 118/592 (19%), Positives = 241/592 (40%), Gaps = 59/592 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY------- 53 M+ N + L I++ + F P E++ +++ ++ Q Q + Sbjct: 1 MD--KNTITGLVLIAILLVGFS-FLSRPNKEQLAAQQRYYDSIAQVQQREADLKAKAEAA 57 Query: 54 -----AAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A D A +V ++N ++ KG + L+ Y + Sbjct: 58 LANNKEAQTTDSTALFFDALQGTDSQVTIQNNLAELTVATKGGRISSATLKEY-MGQDKK 116 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +P VTL S + A ++++ + + + ++ T ++L +A+ Sbjct: 117 TP-VTLFSGDD------ASMNFLFYNKKETIQTEDYYFKVV--DYTDSTVTMRLSADSAS 167 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPR-----GRIMRHKPQTATNTFGVQEG 219 I F+ ++ ++ YL +++ + + R + T + E Sbjct: 168 YIDFKYSMH-NDTYLVDFTIDAV-GMANKLASTKYVDIEWSQRARQIEKGYTYENRLSEL 225 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + GD + Y K+ E W+ +++++SVF+ + + Sbjct: 226 TYKITGDGT----DYLSAGKNDEKEVAERLDWIAFKNQFFSSVFLADADFEKTKLSSKME 281 Query: 280 DGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDWG 337 + Y +SA T+ P TT F + G + T+ +K L+ G Sbjct: 282 TQGSGYIKDYSAEMSTVFDPTGEKTTQLFFYFGPNHYKTLTALDKGRTEKWELNRLVYLG 341 Query: 338 WFYFIAKPMFM---LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W + + + + + GI ++L T+ VK + FP K Y+S+A M+ ++P Sbjct: 342 WPLIRWINKWFTINIFDWLSSWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKP 401 Query: 395 KIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 KIDE+ +K+ KQ Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+ Sbjct: 402 KIDEIGKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIEL 461 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS-------MFIQMK 506 R + W DL+ D F +PF H+ ++ ++M+++ M Q Sbjct: 462 RQQS-FLWADDLSTYDAFINFPF--HIPFLGS---HLSLFCLLMTVTNILNTKFMMQQQD 515 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P + MPV+F+F L+ +P+GL Y+ S +IS+V ++ K Sbjct: 516 TGANPQMAAMKWMSYLMPVMFLFILNDYPSGLNYYYFISTLISVVTTLIMRK 567 >gi|282879438|ref|ZP_06288176.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella buccalis ATCC 35310] gi|281298436|gb|EFA90867.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella buccalis ATCC 35310] Length = 631 Score = 267 bits (682), Expect = 4e-69, Method: Composition-based stats. Identities = 116/614 (18%), Positives = 244/614 (39%), Gaps = 52/614 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY------- 53 M+ N + L +++ + ++ P E+ + Q + Sbjct: 1 MD--KNTITGLVLMGLLLIGFS-WWSQPSSEQKAEMMRQDSIAAVMKQKAETNKKNAELK 57 Query: 54 ------AAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 A D A + + L+N L ++N KG ++G+ D Sbjct: 58 HLAELKAKQEADTTALFHKALQGEAQDIVLQNEKLQLTLNTKGGTVTKAVIKGF-EDREG 116 Query: 104 NSPIVTLLSPSNTKNAYFAELDY-VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 N + L + N + D ++T + P++ T + + L +K Sbjct: 117 NKDVTLLDEKVHQLNFTLSTKDTNIATQDLFFQPSAQTDSTVTLTANAGQGKSMVLTYKL 176 Query: 163 ANNILFERTISLDE-HYLFKIVDTVTN-NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 N L ++ ++ + LF V N N D+ R +G ++ T T + ++G Sbjct: 177 GPNYLLHMSMQVNGMNGLFAPDTKVMNVNWKDKCRQQEKGFTFENRYSTLT--YHEEDGG 234 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-S 279 L + S + + W+ ++++++V I + + + + Sbjct: 235 TDKLSETS----------EKVDEQIDKKIDWVAFKNQFFSAVMIAKHDFNTGALLTSIPQ 284 Query: 280 DGHARYQAKFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIPR---FEMLID 335 + + ++ A T T + F + G +F ++ E+ + + L+ Sbjct: 285 QKGSGFLKEYEAKLKTFFDPTGQTPSEFEFYFGPNDFRLLNRVEQQSTFNKDLELQRLVY 344 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNF--GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW F + + F L F G+ ++L T+ +K++ FP+ KK Y+S+A M+ ++ Sbjct: 345 LGWPLFRIINRWFTIYVFDWLSKWFPMGVVLILITLLLKVITFPMVKKSYMSSAKMRVLK 404 Query: 394 PKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PK++ ++ + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + +++ Sbjct: 405 PKLEAATAQYNKPEDQMQKQQAMMAEYSKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQ 464 Query: 453 MRHAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-QMK 506 +R + WI DL+ DP NI+ + L F + M++ QM Sbjct: 465 LRGES-FLWINDLSTYDPVIEWNRNIWLIGDHLSLTCILFCVANVLYSWMTMRQQRDQMV 523 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 K ++ MPV+F F + + +GL Y+ S S + K E L Sbjct: 524 GQQAEQMKMMQWMMYLMPVMFFFMFNDYSSGLNFYYFVSLFFSAAIMWTLRKTTNDE-KL 582 Query: 567 IDRLRSTFSKNYNS 580 + L + + +N + Sbjct: 583 LKILEARYEENKAN 596 >gi|261879826|ref|ZP_06006253.1| inner membrane protein OxaA [Prevotella bergensis DSM 17361] gi|270333484|gb|EFA44270.1| inner membrane protein OxaA [Prevotella bergensis DSM 17361] Length = 636 Score = 267 bits (682), Expect = 5e-69, Method: Composition-based stats. Identities = 126/623 (20%), Positives = 245/623 (39%), Gaps = 69/623 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-----------RKNIQTVKQPNQV 49 M+ N + L +++ + +Y P EE + K + K Sbjct: 1 MD--KNSLIGFVLIAVVLIGFS-WYAQPSEEEQRAQFVKDSIAHVNRAKAEKDAKAAAFK 57 Query: 50 DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 A + + AL + V LKN L + + KGAQ ++ Y +++ Sbjct: 58 RQQAARQQVQEDTTALFHHALTGQAQDVVLKNDKLELTFSTKGAQVKKAVVKNYKDNITE 117 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 VTL Y V+ NI + + ++ + + Sbjct: 118 KKD-VTLFQGDEQSIEYM----LVAKEANISTADLFFQTSEVTDST------VVFTAEAG 166 Query: 164 NNILFERTISLDEHYLFKIVDTVT--------NNSIDQIRFSPRGRIMRHK----PQTAT 211 SL + YL ++ V+ N S I + + R + AT Sbjct: 167 AGKTIRMIYSLGDSYLLRMKFQVSGMAGLFAPNTSTMAINWQDKVRQQEKGFAFEARYAT 226 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 T+ +G L + + ES W+ ++++++V I Sbjct: 227 LTYHESDGGTDYLNASN----------EKIDEEIKESIDWVAFKNQFFSAVMIAKDNLGT 276 Query: 272 HSQFKYL-SDGHARYQAKFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIPR 329 ++ + + + Y ++ A + T T F + G +F + E++ A + Sbjct: 277 NTLMTSIPQEKGSGYLKQYQAKMKSFFDPTGNTPTEFEFYYGPNDFRLLQSVEEESAFGK 336 Query: 330 ---FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF--GIAIMLTTVFVKLLFFPLAKKQYV 384 E L+ GW F + + F L F GI ++L T+ +K + +P+ KK Y+ Sbjct: 337 DLQMERLVYLGWPLFRIINRWFTIYVFDWLSKWFPMGIVLILITLLLKAITYPMVKKSYM 396 Query: 385 STANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S+A M+ ++PK+D ++F + Q+ Q+AM+ Y + ++PL+GC P+L+Q P++ A+ Sbjct: 397 SSAKMRVLKPKLDAATKQFDKPEDQMQKQQAMMAEYAKYGVSPLSGCLPMLIQAPIWIAM 456 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMS 498 + + ++++R + W+ DL+ DP TN++ + L F I + Sbjct: 457 FNFVPNAIQLRGES-FLWMDDLSTYDPILQWNTNLWLIGDHLSLTCILFCGAQIIYSWFT 515 Query: 499 LSMFI-QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + M QM K ++ MP++F F + + +GL Y+ S ++S V+ Sbjct: 516 MQMQKDQMVGQQAEQMKMMQWMMYLMPLMFFFIFNDYSSGLNFYYFVSLIMSAAIMFVLR 575 Query: 558 KMHGAEIGLIDRLRSTFSKNYNS 580 K E L+ L + + +N N+ Sbjct: 576 KTTNEE-KLLAILEARYKENQNN 597 >gi|325285135|ref|YP_004260925.1| Membrane protein oxaA [Cellulophaga lytica DSM 7489] gi|324320589|gb|ADY28054.1| Membrane protein oxaA [Cellulophaga lytica DSM 7489] Length = 615 Score = 266 bits (680), Expect = 6e-69, Method: Composition-based stats. Identities = 136/613 (22%), Positives = 246/613 (40%), Gaps = 70/613 (11%) Query: 1 MERNWN---YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME + L + W N P EE+ ++K Q + + Sbjct: 1 MEEKKFDAKTLIGFLLIFGLFVLWFNT-TQPTAEELEAQKKEQQKTEAATVDNKQEKETT 59 Query: 58 IDDRAQALSMSPRVE--------------------LKNPSLIGSINLKGAQFDDLNLRGY 97 + LS S V L+N L I+ KG Q + ++ + Sbjct: 60 AQEPVLNLSDSTAVANYKSKIGAFGYTPALEGTTVLENNVLYLRISNKGGQIVEAKMKNF 119 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 V+ +S V L+ +N A + ++ + ++ ++ S T + Sbjct: 120 ---VTYDSLPVHLVKDNN------ASFGLTFSTSDNRVLDTKDLYFEPSISKNGNNTVLS 170 Query: 158 LVFKNANNILFERTISLD-EHYL--FKIVDTVTN---NSIDQIRFSPRGRIMRHKPQTAT 211 + K + E + + YL F I N NS I + + +RH + Sbjct: 171 MKAKVSATDFLEYRYEIKPDEYLLDFNIRSQGLNGVLNSAAPIALVWKQKGIRHSK---S 227 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 T+ + + D + + E S WL +++S+ K Sbjct: 228 ATYENRYTRLTYNHDDGNISKL---SESSDDEEEEVDVKWLSYRQHFFSSILATDKHFET 284 Query: 272 HSQFKYLSDGHARYQAKFSANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + KF+ +LP ++ L+ G + + Y++ Sbjct: 285 AKLSSVNLVEDDTPETKFTKENTAVLPLKADAGELSYNMNLYYGPTDIKELSKYKE---- 340 Query: 328 PRFEMLIDWGW--FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 E I +GW F FI + +F F + +GIAI++ T+ V+LL P+ K Y+S Sbjct: 341 LGLEDSIPYGWGIFGFINRYVFTPAYTFLSSFLPYGIAIIVMTILVRLLMSPVTYKSYLS 400 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A MK ++P+I EL EK+K +P + Q+ ++LY +P++GC P LLQ+PVF+A++ Sbjct: 401 QAKMKVLKPEIAELGEKYKDNPMKK-QQETMKLYNKAGASPMSGCLPALLQLPVFYALFM 459 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQ 504 S +R P + W DL++ D + LPF++P + HV ++PI+ S+++F Sbjct: 460 FFPTSFALRQKP-FLWADDLSSYD------IIAELPFHIPLYGDHVSLFPILASIAIFFY 512 Query: 505 MKMS------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M M+ P IL P++ + +S+ +GL +Y+ SN+I+I I K Sbjct: 513 MMMTSGQNMQQQPGMPNMKFILYLSPLMMLIFFNSYASGLSLYYFVSNLITIFIMLAIKK 572 Query: 559 MHGAEIGLIDRLR 571 E + +++ Sbjct: 573 FIIDEDKIHAKIQ 585 >gi|225012688|ref|ZP_03703123.1| 60 kDa inner membrane insertion protein [Flavobacteria bacterium MS024-2A] gi|225003221|gb|EEG41196.1| 60 kDa inner membrane insertion protein [Flavobacteria bacterium MS024-2A] Length = 608 Score = 266 bits (680), Expect = 7e-69, Method: Composition-based stats. Identities = 119/619 (19%), Positives = 235/619 (37%), Gaps = 75/619 (12%) Query: 1 MERNWN---YFVAIALSVIIVYAWQNFYVYPRIE--EMNNERKNIQTVKQPNQVDNSYAA 55 ME F+ L + ++ W + P E + TV+ +V + Sbjct: 1 MEEKKFDPYQFIGFIL-IAVILTWMLYRNGPAEEASTAKATTEEGATVQSTPEVVQVSDS 59 Query: 56 VLIDDRAQA---------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 +L + +A + V++ + + KG Q L + + Sbjct: 60 ILQQQKVEAFGDLGTLFVPKPTENVKITTDNFSVEVQSKGGQIVLFQLDEF---ENYEDA 116 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANN-------IELPNSNTVWNLISGKILTPTTPIKLV 159 + L+ SNT + N L + ++L+ L+P+ + Sbjct: 117 PIRLIDESNT-DFNIVMTTLDGRLMNTREMYFSPTLTDKGDAYHLVMKASLSPSQYVAFE 175 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + F +T YL + + + P Sbjct: 176 YH------FPKT-----GYLHTVALK---------TVGMQRLLNSASPPQLDWKTTTFRN 215 Query: 220 FIAVLGDKSLVEQKYSDIEK--------SSISNFHESNSWLGISDKYWASVFIPSKETSF 271 I++ + E + E E W+ +++++ IP Sbjct: 216 SISIDYENRYTEFTFGYEEDRVDYLSLNGEDKETREGIRWISYRQHFFSAILIPESPIPS 275 Query: 272 HSQFKYL----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 S ++ F N L ++ T+ + G ++ T+ + E DL Sbjct: 276 ASLTSVNLASDESLDEKFTKSFETNYPLTLNKGNLDTSLTFYFGPTDYKTLQNLEGDLET 335 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + + WG F +I K +F+ + F + ++GIAI++ T+ V+L P+ K YVS Sbjct: 336 S---IPMGWGIFGWINKFIFLPLFEFLSSFLSYGIAIIVMTLIVRLAMSPVTYKSYVSQI 392 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 MK ++P I+ + KFK + Q+ + LY NP++GC P L+Q+PVF+A++ Sbjct: 393 KMKLLRPDIEVINGKFKDDAVKR-QQETMSLYSRAGANPMSGCIPALIQLPVFYALFSFF 451 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI---- 503 ++ +R + W DL++ D ++ L +PFY HV ++PI+ S+++F Sbjct: 452 PVAFVLRDKS-FLWADDLSSYD--SVLELGFNIPFYGD---HVSLFPILASIAIFFYTQM 505 Query: 504 ---QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 Q M P +I+ MP++ +F +++ +GL +Y+ SN+++I+ VI Sbjct: 506 TTGQQSMPQQPGMPNMKIIMYLMPLMMLFFFNNYASGLSLYYFVSNLLTILLMLVIKNFI 565 Query: 561 GAEIGLIDRLRSTFSKNYN 579 + + ++ K Sbjct: 566 IDDNKIHAKIEENKKKPKK 584 >gi|332296677|ref|YP_004438599.1| Membrane protein oxaA [Treponema brennaborense DSM 12168] gi|332179780|gb|AEE15468.1| Membrane protein oxaA [Treponema brennaborense DSM 12168] Length = 603 Score = 266 bits (679), Expect = 1e-68, Method: Composition-based stats. Identities = 127/616 (20%), Positives = 242/616 (39%), Gaps = 62/616 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV--YPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N AI LS +++ + + +P + + T + + Sbjct: 1 ME--KNTVWAIILSTLVLVIFMFVQITFFPAVPAAKQTEQYQNTADVSSAQGQLPVNTVA 58 Query: 59 DDRAQA---------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 A+ + ++N + + +G + L + Sbjct: 59 VSGAEENGSLNAAGSAGDSAAAVTEEQFVIQNGKVKVTFTNRGGDIINYELLEHK---DG 115 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 NS + + S A+ T P + ++++ T KN Sbjct: 116 NSGVEMADNVSAKNRAFSVSFGAAGT------PIIDDIFSVKKIDDNTIGFYKTFTVKNN 169 Query: 164 NN----ILFERTISLD-EHYLFKIVDTVT-NNSIDQIRFSPRGRIMRHKPQ-----TATN 212 + +F + + D Y+F++ ++ ++++ + F +R PQ + N Sbjct: 170 DGTESSFVFAKQYTFDPAGYMFRLDVSIDGDDTLKGLAFGNSAYTIRTSPQIGPYFDSKN 229 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 F++ G ++K + + + + +W G+S KY+ + +P T Sbjct: 230 NRYENRTFMSYNGS----KKKKTTLGSGQSKVYDDGYTWTGVSGKYFEILGVPLNPTVMQ 285 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL------- 325 + Y + T + + G K T+ Y Sbjct: 286 DVTYSAALEVDNYANAQVMMSRGPITQSDAQDTYYFYVGPKTEETLKIYNNAAENVWHLS 345 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 + E L G +++ + M Y ++ N+G++I++ T+ +KL+ FPL KK +S Sbjct: 346 GLKLNESLESSGILFWLETFLKWCMELLYKIIPNWGVSIIILTILLKLVLFPLTKKSSLS 405 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 T M+ +QPK+ E++ KFK P + M +LYK NPL+GC P+L+Q P+ FA+Y Sbjct: 406 TLKMQELQPKMQEIQAKFK-DQPDKMNAEMAKLYKETGYNPLSGCLPLLIQFPLIFAMYN 464 Query: 446 VISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI- 503 + + E R A F GWI DL+ D +++ L LPF + + PII +S + Sbjct: 465 LFNNYFEFRGAMFIPGWIPDLSVGD--SVYALNFNLPFLG---NQLRLLPIIYVISQLLF 519 Query: 504 ----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q + + +++ MP+ F F + P+GL+IYW+ SN + +VQQ ++ K Sbjct: 520 GKVTQSGTAAGASGMQMKIMMYGMPLFFFFIFYNAPSGLLIYWTVSNALQLVQQVILNKT 579 Query: 560 HGAEIGLIDRLRSTFS 575 A+ I+ Sbjct: 580 MKAKRAEIESREPEKK 595 >gi|116329466|ref|YP_799186.1| preprotein translocase, YidC subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329930|ref|YP_799648.1| preprotein translocase, YidC subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122282297|sp|Q04W30|OXAA_LEPBJ RecName: Full=Inner membrane protein oxaA gi|122282754|sp|Q04XE2|OXAA_LEPBL RecName: Full=Inner membrane protein oxaA gi|116122210|gb|ABJ80253.1| Preprotein translocase, YidC subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123619|gb|ABJ74890.1| Preprotein translocase, YidC subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 622 Score = 266 bits (679), Expect = 1e-68, Method: Composition-based stats. Identities = 114/623 (18%), Positives = 238/623 (38%), Gaps = 66/623 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN-------SYA 54 +R F+A+ LS+ I F+ P ++ + ++ ++ D S Sbjct: 3 DRQSRLFLALILSMGIWMGVNYFFFPPTPKKTSETKEVKVDKPSDDKQDQIQKEKKESRT 62 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------LDVSSNSPIV 108 + S S + + S I + G + ++ + + V+ P Sbjct: 63 TIPSKGTKIIPSESKKTLVVTESYIVEFSSLGGRISKFYVKDFTGPNGELVQVARKDPET 122 Query: 109 TLLSPSNTKNAYFAE---LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV-FKNAN 164 ++ + D+ T + ELP+S S + F Sbjct: 123 LIVDGKTYYGVELSREKGFDFNFTDSLNELPHSEWNRIPFSLAENKADHSVVFSAFSPDK 182 Query: 165 NILFERTI-SLDEHYLFKIVDTVTNNSIDQIRFS-----PRGRIM-------RHKPQTAT 211 ++T D FK+ +V N + +++ F+ R + +P Sbjct: 183 TYQLKKTFRFFDRENYFKVTVSVINLTKEKLSFASQKNVQYLRTFGSLGPFPKDRPLNDR 242 Query: 212 NTFGVQEGFI--AVLGDK--------------SLVEQKYSDIEKSSISNFHESNSWLGIS 255 +T + D + E S+ + G Sbjct: 243 DTANFFRFYHLDGSFNDTLDGSSSVGFWSSIVNFFTGNSGVDESFSLKTSTGGVDFAGTG 302 Query: 256 DKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315 +Y+ +V P + + N IT+ PG+ + G +E Sbjct: 303 SRYFIAVADPLDHKPQGIILDNRPKNESGAVLVY--NNITLGPGEVYNLDFASYVGIRES 360 Query: 316 PTIHHYEKDLAIPR------------FEMLIDWGWFYFIAKPMFMLMSYFYNL-VGNFGI 362 + ++ +L + + G + ++ Y + N+G Sbjct: 361 IGMVFHDPELDPSQTKNSPFAGLSSDLNKSFNQGITTPFRNGIIWVLKQIYRFTIPNYGW 420 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 +I++ + KL+F+PL +KQ S M+ + P++ + EKF P ++ Q+ ++LYK + Sbjct: 421 SIIIFAILFKLVFYPLNQKQAESMKKMQELSPQLKTINEKFANDP-KMRQQKTMELYKKN 479 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 N+NP+ GC P+++QIP+F A+Y S ++++ ++P + W+KDL+ D + +P+ Sbjct: 480 NVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSP-FLWVKDLSEPD---VIWTSPAIPY 535 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 + + + + ++M + Q +M+ D Q M++ MPV+ ++ + P+G+ +YW Sbjct: 536 FTQTGIGLNLLALLMVGTQIFQTRMTSVSMDPNQKMLMYVMPVMMLYIFWNMPSGVTLYW 595 Query: 543 SWSNVISIVQQAVIMKMHGAEIG 565 ++ NV+SI QQ V + E Sbjct: 596 TFQNVLSIGQQWVTNHLKKTEAK 618 >gi|91215968|ref|ZP_01252937.1| putative inner membrane protein translocase component YidC [Psychroflexus torquis ATCC 700755] gi|91185945|gb|EAS72319.1| putative inner membrane protein translocase component YidC [Psychroflexus torquis ATCC 700755] Length = 636 Score = 265 bits (678), Expect = 1e-68, Method: Composition-based stats. Identities = 126/615 (20%), Positives = 253/615 (41%), Gaps = 79/615 (12%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 N + AL +I+ Y+ P E++ E+ N V+ D + R+Q Sbjct: 9 KNSIIGFALIGLILIG--VMYMNPN-EDIVPEQDNTDQVETNTSTDPVSTSKQTPKRSQE 65 Query: 65 LSMSPRV-------------------------------ELKNPSLIGSINLKGAQFDDLN 93 ++ + ++N + I+ KG Q + Sbjct: 66 NGIASNLQDSVNSELARRDYGAFAYSALQDFAKDDAVTTIENEVIKLEISNKGGQIVEAK 125 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 ++ Y + V L+ N A + N+ + N++ ++ + Sbjct: 126 MKQYDTYKGN---PVYLIKDGN------ANFNIEFETNDGRVINTSDLYFEPNLTTENGN 176 Query: 154 TPIKLVFKNANNILFERTISLD-EHYL--FKIVDTVTNN--SIDQIRFSPRGRIMRHKPQ 208 + + K ++ E L+ E Y+ F+I N+ S DQ S + +++R Sbjct: 177 QVLTMRAKVSDLEFLEFYYGLESEDYMMNFRIRSQGLNSVISSDQANLSWKVKVLRKAKS 236 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI---P 265 ++ + I L + E+ + ES W+ ++ SV + P Sbjct: 237 I---SYENRYTEIVYLYED---EKDDYTGQGDEAVEEDESIDWIAFKQHFFTSVLLTDTP 290 Query: 266 SKETSFHS-QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 ++ S + F A L + T + G +F + YE+ Sbjct: 291 FEKGKMTSLNLVQDEQIDTVFTKNFLAEVPLKLNNGEFSETMNWYHGPSDFDVLSSYER- 349 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL---VGNFGIAIMLTTVFVKLLFFPLAKK 381 + + ++ GW F ++ + +F L + ++G+AI++ T+ V+++ P+ K Sbjct: 350 ----KLDEIVPLGWGLFGWINRYIFIPFFGFLSSSLPSYGLAIIVMTIVVRIVLSPITYK 405 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 YVS A MK ++P+I+E+ EKFK + + Q+ ++LY ++PLAGC P LLQIPVF+ Sbjct: 406 SYVSQAKMKVLKPEINEINEKFKDNAMKK-QQETMKLYSKTGVSPLAGCIPALLQIPVFY 464 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLS 500 A+++ + ++R + W DL++ D IF +P + HV ++PI+ S++ Sbjct: 465 ALFQFFPSAFDLRQKG-FLWADDLSSYD--VIFEWDAYIPLVSFAYGNHVSLFPILASIA 521 Query: 501 MFI--------QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +F M+ S P +I+ + P + + +++ +GL +Y+ SN+I+I Sbjct: 522 IFFYTQMTAGQNMQQSSQPGMPNMKVIMYFAPFIMLIFFNNYASGLSLYYFISNLITIGI 581 Query: 553 QAVIMKMHGAEIGLI 567 VI + + ++ Sbjct: 582 MLVIKHVIIDDKKIL 596 >gi|330835990|ref|YP_004410631.1| Membrane protein oxaA [Spirochaeta coccoides DSM 17374] gi|329747893|gb|AEC01249.1| Membrane protein oxaA [Spirochaeta coccoides DSM 17374] Length = 604 Score = 265 bits (677), Expect = 2e-68, Method: Composition-based stats. Identities = 131/552 (23%), Positives = 225/552 (40%), Gaps = 47/552 (8%) Query: 36 ERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 E I + +Q ++ S SP + +N I + + GA + L+ Sbjct: 47 EEPAIHMISSTDQAWDTGLPGSFIAIGDNPSRSPFI-FENEEFIITFDPVGASVSSIKLK 105 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 + + P+ L + NA+ + + P +SG +T T Sbjct: 106 KH---LDGKEPVEMLFRSPSDHNAF-----LLYAGGDRTRPLDTVFSYSVSGNEVTFTRN 157 Query: 156 IKLVFKNANNI----LFERTISLDE--HYLFKIVDTVTN--NSIDQIRFSPRGRIMRHKP 207 +V ++ + + YLF+I TN N + F + +P Sbjct: 158 FAVVGEDGRALPGHFTLTKRFRFGGAGEYLFEIKVGATNSENKAVPLSFDNNAYTLAFEP 217 Query: 208 QTAT-----NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASV 262 Q + + + +I G K + + I SW + KY++ + Sbjct: 218 QIGPAFEKLDNYNYRRLYIRNDGGKRTQPK-----LSNGIYQTTAGISWTAVVGKYFSVI 272 Query: 263 FIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 IP + + + Q + S T + G + + Y Sbjct: 273 AIPDATRYTTTLAERSDENSTVPQTSSIYLTRPAVRSASFEDTFLFYIGPQLKQNMDIYN 332 Query: 323 K------DLAIPRFEMLID-WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 K L+ E ++D W ++ + ++ FY ++ N+G+AI+L T+ ++L Sbjct: 333 KADSNSFQLSELHLEQVLDTSSWLGWLETILKGVLQLFYKVIPNYGVAIILLTLLTRVLM 392 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 PL KK STA M + P++DELR+K+ +P Q L +A LY+ INPL GC P+LL Sbjct: 393 HPLNKKSMASTARMSALSPQMDELRKKYADNP-QKLNEATAALYRKEKINPLGGCLPMLL 451 Query: 436 QIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 Q P+ A+Y +++ E+R A F GWI DL+ D + T LPF + I P Sbjct: 452 QFPIMIALYGLLNKHFELRGAMFIPGWIPDLSVPD--TVLTFSFNLPFLG---NQLHILP 506 Query: 495 IIMSLSMFIQMKMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I+ + SM MK++P ++ MP++ F L + P+GL++YWS N+I Sbjct: 507 ILYATSMIFSMKLNPSSSGAAGSQASTMKFMMYGMPLILFFTLYNAPSGLLLYWSSVNLI 566 Query: 549 SIVQQAVIMKMH 560 S++QQ K Sbjct: 567 SMLQQKFTNKKT 578 >gi|89891424|ref|ZP_01202930.1| 60 Kd inner-membrane protein [Flavobacteria bacterium BBFL7] gi|89516455|gb|EAS19116.1| 60 Kd inner-membrane protein [Flavobacteria bacterium BBFL7] Length = 610 Score = 264 bits (676), Expect = 2e-68, Method: Composition-based stats. Identities = 122/590 (20%), Positives = 233/590 (39%), Gaps = 60/590 (10%) Query: 8 FVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 V + L II+ W Q T Q +N AA I + Sbjct: 11 IVGMGLIFIILMYWFSQNQADVEANPETTTETSAATQDTTPQLTS-NNEPAAAPISNGVF 69 Query: 64 ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE 123 + + +N + I+ KGA + L+ Y +S V L P+ + + Sbjct: 70 QAGSNEVITFENDLIQFKIDSKGALIQEALLKSYKT---YDSLPVYLAKPNEKDH----Q 122 Query: 124 LDYV-STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 LD V T + ++ + + S + + + E L ++Y+ Sbjct: 123 LDLVFVTNDGRKMHTKDMSFT-PSQSMNGENKVLSFKANVGPSQFLEFRYELQPKNYMMD 181 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS--DIEK 239 T+ + + Q + + + E K+ D Sbjct: 182 --FTIRSQGLSQ-------TFNTADAPQLNWEMLAYKRSKGMDNENRYTEIKFEYGDGSD 232 Query: 240 S------SISNFHESNSWLGISDKYWASVFI---PSKETSFHSQ-FKYLSDGHARYQAKF 289 + S++ ++ S+ + P K+ S+ D Y KF Sbjct: 233 DYTGQGAEADEEEDKVSYIAYKQHFFTSILLTDTPFKKAKLISENIASQDDEQDTYTKKF 292 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 ++ G + + G ++ + YE++L + ++D GW F F++ Sbjct: 293 NSQIELEYTGGELAYNMDWYFGPTDYDILDGYERNL-----DEVVDLGWGIFGWINEFVI 347 Query: 350 MSYFYNLVGN----FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 F L N +GIAI+L T+ V+++ P+ K Y++ A MK ++P+++ + EK+K Sbjct: 348 RPLFSLLTKNAGIPYGIAIILLTICVRIILSPVLYKSYMTQAKMKILRPELNRIAEKYKD 407 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + + Q+ +++ +PL+GC P LLQ+PVFFA++K + ++R + W DL Sbjct: 408 NAMKK-QQETMRIQSEAGASPLSGCLPGLLQMPVFFALFKFFPTAFDLRQKS-FLWADDL 465 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS--------PPPADKGQA 517 ++ D IF L +PFY HV ++PI+ S+++F M+M+ P Sbjct: 466 SSYD--EIFKLPFNIPFYGD---HVSLFPILASIAIFFYMQMTTGQTMQNTQQPGMPNMK 520 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 I+ P+ + +++ +GL +Y+ SN+I+I VI E ++ Sbjct: 521 FIMYLSPLFMLVFFNNYASGLSLYYFVSNLITIGIMLVIKNFVIKEEKVL 570 >gi|171911028|ref|ZP_02926498.1| 60 kDa inner membrane insertion protein [Verrucomicrobium spinosum DSM 4136] Length = 618 Score = 264 bits (675), Expect = 3e-68, Method: Composition-based stats. Identities = 127/593 (21%), Positives = 235/593 (39%), Gaps = 92/593 (15%) Query: 10 AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA------VLIDDRAQ 63 AI ++ W + + + P Q + A Sbjct: 13 AIGMAFNFW--WTAKHPPVPVPQPPPASAAPAPAADPAQAVATNPGGLANPATPAAPGAA 70 Query: 64 ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE 123 A ++ELKN S I + G + + + L ++ A Sbjct: 71 APVAEEKIELKNASAIYTFTNVGGGIASVVMLD-------TKDHIRL-----NQHGKAA- 117 Query: 124 LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE-----HY 178 + + ++++ + + +L + S E + Sbjct: 118 ---IGALGTAAKAYQDLTYHVVEKT----DKRVVFEALSPEQVLVRKEYSFSEGSGSSDH 170 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRI---------------------MRHKPQTATNTFGVQ 217 L ++ T+ N S ++ AT +F Sbjct: 171 LVELKVTIKNQSSAKLVRDSYYLYTGAASSLRPDEIEAPAFVWNDAGDASSFATGSFRDG 230 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVF-----IPSKETSFH 272 GF+ G +++ + + W G+ +++ ++ IP+K + Sbjct: 231 AGFLGFGGPVVELQKNFQHLR------------WGGVMSRFYTTLISTKTDIPAKTWATR 278 Query: 273 SQFKYLSDGHARYQA---------KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 + +D ++ I + P S + ++ GAK F + + Sbjct: 279 FLIDHSNDEFKDHKKALQDYAIHGGVGLPTIELEPNASTSVDYRIYIGAKIFHDLKKIDV 338 Query: 324 DLAIPR--FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 P + ++ +GWF F+++ + L+ +F++L GN+G+AI+L T+ V+ L +P+ + Sbjct: 339 AEGQPNRQMQYVMFYGWFTFVSRGLVFLLRWFHDLTGNWGVAIVLLTITVRSLLWPVQAR 398 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 + M + PKI EL+EK K P Q + M+++Y+ + +NPL GC P+L+QIP+FF Sbjct: 399 SNATMKRMGLLAPKIKELQEKHKDDP-QKVNTEMMRMYREYGVNPLGGCLPLLVQIPIFF 457 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y V+ + E+R PF+GWI+DL+ D L G + + P++M L+M Sbjct: 458 GFYSVLRYAAELRGQPFFGWIQDLSLPDTVTTLHLLGY-------HLPLNPLPLLMGLTM 510 Query: 502 FIQMKMSPPP--ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 F+QMK++P P ADK Q I MP +F+F SF + L +YW+ N+ SI Q Sbjct: 511 FLQMKLTPQPASADKTQQRIFMLMPFMFLFFCYSFASALALYWTVQNIYSIFQ 563 >gi|311746146|ref|ZP_07719931.1| inner membrane protein OxaA [Algoriphagus sp. PR1] gi|126576367|gb|EAZ80645.1| inner membrane protein OxaA [Algoriphagus sp. PR1] Length = 599 Score = 264 bits (674), Expect = 4e-68, Method: Composition-based stats. Identities = 127/609 (20%), Positives = 248/609 (40%), Gaps = 59/609 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M++N + L ++ + F+ + QT + + +++ Sbjct: 1 MDKNQAT--GLILFAAVILVYSFFFASGPEVPVEEVEAPAQTETVQDVKPAMESQAPVEN 58 Query: 61 ---------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A V L+N + SI+ KGA +++ L+ Y S + Sbjct: 59 DSMISQANLAKFGALATLASGEEQLVTLENDLIKVSISTKGASVNEVELKEYK----SWT 114 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 LL S + F+ + N +L N N + + L + Sbjct: 115 QEPLLLIDSESSKMAFSLESNTGSVNLNDLYF-NPSLNSSQDEEGNAVHTLTLSAGTESG 173 Query: 166 ILFERTISLDE-HYLFKIVDTVTNNS----IDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 +T +L + Y + S + ++F+ ++ + + + Q Sbjct: 174 -EIIQTFTLKDGSYEVHKSLKIDRFSNYFTGNSLQFTWADQVRKQERDIGESRRKTQ--V 230 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 L S D E W+G S +++ + I + + + Sbjct: 231 NYFLASDSYENLGVGD--DLEQEQVAEPVKWIGFSQRFFTAGIIADETFQDVNLAQSTPA 288 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 + K+ ++I P K T + + G + + FE +D G+F+ Sbjct: 289 DSSF--VKYMETSLSI-PLKDNTASFRFYFGPDNYKGLKKVT-----EGFEKNVDMGYFF 340 Query: 341 ------FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 +I +F + F++ N+G+ I+L + +KL PL K YV A M+ I+P Sbjct: 341 VSWVNKYIIVNLFAFLEKFFS---NYGVIIILIVLAIKLALSPLTYKSYVGMAKMRVIKP 397 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +IDEL+EK+ P + +Q+ ++L+ ++P++GC P++LQ+P FA++ ++++R Sbjct: 398 EIDELKEKYGDDPTK-MQQEQMKLFGKLGVSPISGCLPMVLQMPFLFAMFFFFPNAIQLR 456 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--PA 512 + W DL+ D F L +PFY HV ++ ++M++S + K + A Sbjct: 457 QES-FLWANDLSTYD--TFFNLPFTIPFYGS---HVSLFTLLMTVSQIVYTKFNNQLTTA 510 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + MPV+F+F L+S+PAGL Y+ SN+++ QQAVI K+ + + ++ Sbjct: 511 TGPMKNLGYIMPVMFMFILNSYPAGLSFYYFVSNMVTFGQQAVI-KLFVDDDKIRAKVEE 569 Query: 573 TFSKNYNSQ 581 + KN N + Sbjct: 570 SKRKNANKK 578 >gi|213962572|ref|ZP_03390834.1| inner membrane protein OxaA [Capnocytophaga sputigena Capno] gi|213954898|gb|EEB66218.1| inner membrane protein OxaA [Capnocytophaga sputigena Capno] Length = 609 Score = 264 bits (674), Expect = 4e-68, Method: Composition-based stats. Identities = 125/603 (20%), Positives = 241/603 (39%), Gaps = 56/603 (9%) Query: 1 MERNWN---YFVAIALSVIIVYAWQNFYVYPRIEEMNN--ERKNIQTVKQPNQVDNSYAA 55 M+ + AL I++ W P EE+ ++ Q K N+ + Sbjct: 1 MDERKFDVKSIIGFALIFILLM-WFMNNNKPSQEELAKHKAQQEQQANKTAANTQNNTST 59 Query: 56 VLIDD-------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 V D + + L+N L +I+ +G Q ++ L+ + ++ V Sbjct: 60 VQPTDLGNFAYSTTLPSAKNEVTVLENKDLKLTISNRGGQPKEVLLKEFKT---YDALPV 116 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L+ N + N +L T+ ++L+ + K + N Sbjct: 117 YLVKDWNATFSLNFTTAQDKKLNTKDLYFEPTLSENNGSQVLS------MKLKTSENTYL 170 Query: 169 ERTISL-DEHYLFKIVDTVTN-----NSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFI 221 E +L E Y+ +V N+ + + + R K T N + + I Sbjct: 171 EYVYTLPKEGYMLDLVVRSQGLAGAVNTSKPMNIDWKLQARRMEKSVTYENRYT--QAAI 228 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 GD+ + + E SW+ + SV I + + Sbjct: 229 QYEGDRINRMS-----QAGNDEQKEEKVSWVAYKQHLFTSVLISDNPFEKGNFISHNIAI 283 Query: 282 HARYQAKFSANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + + K++ N +T LP ++ + + G ++ + Y + + + WG Sbjct: 284 NEGKEVKYTKNFLTSLPIKAKSGELSESLHFYFGPSDYNVLKQYNDKYELTEL-IPLGWG 342 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F ++ K +F+ + F + G+ I+L T V++L P+ K YVS A MK ++P+ID Sbjct: 343 IFGWLNKWLFIPLYNFLADYFSVGLVIILMTFIVRILLSPIVYKSYVSQAKMKVLRPEID 402 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+ +K+ P Q+ + LY +NPL+GC P LLQ+PVF A++ +R Sbjct: 403 EINKKY--DEPMKRQQETMALYSKAGVNPLSGCIPALLQLPVFLALFNFFPTEFGLRQKS 460 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-------P 510 + W DL++ D IF L +PFY HV ++P++ S+++ I M+ Sbjct: 461 -FLWAHDLSSYD--AIFELPFSIPFYGS---HVSLFPLLASIAILIYSLMTMAQTVQPQQ 514 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P ++ P++ +F +++ +GL +Y+ SN+++I I E + ++ Sbjct: 515 PGVPNMKFLIYLSPIMMLFFFNNYASGLSLYYFISNLLTIGIMLAIKYWIIDEKKIHAQI 574 Query: 571 RST 573 + Sbjct: 575 QEN 577 >gi|313681706|ref|YP_004059444.1| protein translocase subunit yidc [Sulfuricurvum kujiense DSM 16994] gi|313154566|gb|ADR33244.1| protein translocase subunit yidC [Sulfuricurvum kujiense DSM 16994] Length = 536 Score = 264 bits (674), Expect = 4e-68, Method: Composition-based stats. Identities = 146/564 (25%), Positives = 244/564 (43%), Gaps = 62/564 (10%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA- 62 N VA+ALS I + + N + Q + S + D ++ Sbjct: 8 NQRLLVAVALSFIFFIGYTTIFPPKASNLEANTTNTAVSTVAAAQPETSAKEAVTDTQSA 67 Query: 63 ---QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 Q + + + I+ G + + L + + L+S K Sbjct: 68 SEVQTTATDTLTTVNSKEFTLKIDTLG-RISSVILSN-KKHNGKDGKLAELVSSVGAKPL 125 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DEH 177 Y D A + P S+ + N+ G+ + L +N + +T++ D H Sbjct: 126 YIRFADEALNAAASKTPYSSDLNNITLGEN--GKAVVTLT-QNLPELTVTKTLTFYTDGH 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y KI S ++ F G+ PQ V G I GD + D+ Sbjct: 183 YDAKIA-----LSNEKRYFVYLGQ----HPQVIEQMMTVVGGMI-YSGDNLTTIFEDKDV 232 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 E SI + D+Y+AS+ + + + +N +T L Sbjct: 233 EGRSI---FTDVHFASSFDQYYASII-----------YGFSKETQVYVDRDAQSNPVTYL 278 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G + T + G KE T+ P I++GWF F+A P+F ++ + + L+ Sbjct: 279 EG-TNNFTFNGYIGPKEHKTLEAIN-----PVLTNAIEYGWFTFVAAPIFKILMWLHGLL 332 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G +I+ T+ +++ +PL K VS +K I P+I E++EK+K P + + A+++ Sbjct: 333 GNWGWSIIALTIIIRIFLYPLTHKGMVSMQKIKEIAPRIKEVQEKYKGDPAR-MNAAVME 391 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 +YK H NPL GC P+LLQIPVFFAIY+V+ ++E++ A + W+ DL+ DP I Sbjct: 392 MYKKHGANPLGGCLPLLLQIPVFFAIYRVLLNAVELQGAEWVMWVHDLSRMDPYYIL--- 448 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 PI+M +M+ Q K++P D Q I ++PV+F F +FPA Sbjct: 449 ----------------PILMGATMYYQQKITPSNFTDPLQEKIFKFLPVIFTFFFFTFPA 492 Query: 537 GLIIYWSWSNVISIVQQAVIMKMH 560 GL++YW +N+ SI QQ ++ K Sbjct: 493 GLVLYWFVNNIFSIAQQYLVNKQF 516 >gi|163789146|ref|ZP_02183589.1| putative inner membrane protein translocase component YidC [Flavobacteriales bacterium ALC-1] gi|159875559|gb|EDP69620.1| putative inner membrane protein translocase component YidC [Flavobacteriales bacterium ALC-1] Length = 633 Score = 263 bits (672), Expect = 7e-68, Method: Composition-based stats. Identities = 120/633 (18%), Positives = 247/633 (39%), Gaps = 81/633 (12%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME N + L I+ W + P EE+ ++K + + + + L Sbjct: 1 MEEKKFDINSIIGFVLIFGIML-WYFYQSKPTDEEIAAQKKAQEEQVETEKKVSKQEETL 59 Query: 58 IDDRAQ-----ALSMSPRV---------------------ELKNPSLIGSINLKGAQFDD 91 + AL + +V ++ + KG + Sbjct: 60 VTSAEDYTNVKALDSTEQVALQSKVGSFANALNLPGEDITTVETDVFELKFSRKGGHLAE 119 Query: 92 LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151 + L+ + V +S + L+ +N+ A+ T++N L + + K Sbjct: 120 VRLKNF---VDYDSVPIYLVKDNNS--AFNISFG---TSDNRTLNTQDFPFQPSVTKS-G 170 Query: 152 PTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTN-----NSIDQIRFSPRGRIMRH 205 T + + K + + E L + Y+ N+ I + + +RH Sbjct: 171 ENTVVSMKLKVSESAFLEYRYELKPNDYMIDFSIKSQGLSGEFNTSQPIILDWKQKSIRH 230 Query: 206 KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI-EKSSISNFHESNSWLGISDKYWASVFI 264 ++ + + D K + + + WL +++S+ Sbjct: 231 AKSI---SYENRYTRLTYRHDGD----KIDKLPQMGDDEETVDDVEWLSYRQHFFSSILA 283 Query: 265 PSKETSFHSQFKYLS-----DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 + + + + ++ G ++ L+ G + T+ Sbjct: 284 SNDGALKNVAMTSKDLVEDEEVDTLFTKLYTTKFPLAYNGGEVSKNFGLYYGPTDAKTLK 343 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 YEK L + WG F +I K +F+ + F + +GIAI++ T+ VK++ + Sbjct: 344 TYEKGLEES---IPFGWGIFGWINKAVFIPLFGFLSGFLPYGIAIIVMTILVKIMLSFVQ 400 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 KQ++S A MK ++P++D +R K K + + Q+ + L +PL+GC P L+QIPV Sbjct: 401 YKQFLSQAKMKILKPELDAIRAKHKDNKMKA-QQETMALQSKAGASPLSGCLPGLMQIPV 459 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F+A++ + E+R + W DL++ D ++ L +PFY HV ++PI+ ++ Sbjct: 460 FYALFMFFPTAFELRQKS-FLWADDLSSFD--SVLDLPFNIPFYGD---HVSLFPILAAI 513 Query: 500 SMFIQMKMS-------------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 ++F MKM+ P K ++ + P++ + +++ +GL +Y+ SN Sbjct: 514 AIFFYMKMTTGQQMATQPTQEGMPDMGKMMKYMIYFSPLLMLVFFNNYASGLSLYYFVSN 573 Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 +ISI VI E ++ ++ + +K Sbjct: 574 LISIGIMLVIKNYIIDEEKVLAKIEVSKTKPKK 606 >gi|149176568|ref|ZP_01855181.1| hypothetical protein PM8797T_30327 [Planctomyces maris DSM 8797] gi|148844681|gb|EDL59031.1| hypothetical protein PM8797T_30327 [Planctomyces maris DSM 8797] Length = 707 Score = 263 bits (671), Expect = 7e-68, Method: Composition-based stats. Identities = 138/664 (20%), Positives = 258/664 (38%), Gaps = 98/664 (14%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVY---PRIEEMN---NERKNIQTVKQP--------NQ 48 + + LS +++ WQ F P N N+ K+ Q P Sbjct: 2 EQKRLLLFVTLSASMLFFWQLFINPKIAPPPAAQNVVENDAKDPQGADAPLVAKKPDLPG 61 Query: 49 VDNSYAAVLIDDRAQALSMSPRV----ELKNPS---LIGSINLKGAQFDDLNLRG--YHL 99 D A+ L R L S L I+ GA + +L Y Sbjct: 62 ADKGAEVKPAPPEAELLKNPQRTILLGSLDPDSGYFLQTKISTTGASLVEAHLNDPLYRD 121 Query: 100 DVSSNSPIVTLLSPSNTKN------AYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 + P+ L + K+ A+LD A N + ++N + P Sbjct: 122 LNNPKQPLKILGEFAAGKDFKRSLDLNVAQLDAKLAALNTDCHSANWKVLELVKDPDDPK 181 Query: 154 T--PIKLVFKNANN-ILFERTISLDE------------------HYLFKIVDTVTNNSID 192 + L + I ++ L + Y+ V N+S Sbjct: 182 LYQSVLLSLTAPDGSIEVQKKYELKKYPVPEGKDFREFRDTDQAGYMVHFDIKVVNHSQA 241 Query: 193 QIRFSPRGRIMRHKP-QTATNTFGVQEGFIAVLGDKSLVEQKY-------SDIEKSSISN 244 + + P + A NT ++ I L D VE + ++ + Sbjct: 242 AQKLDYQLLGPIGIPLENAENTRKYRDLRIGFLQDDKSVETEIFTAPDIIENVNAQQVEK 301 Query: 245 FHESNSWLGISDKYWASVFIPSKET-------------------SFHSQFKYLSDGHARY 285 + + + G+ +Y+A++ P + Q + +R Sbjct: 302 YSRAFQYAGVDIQYFAALLTPDGKNYDPQLVNGEMQSNYSASIEPVLVQRGLRDETQSRI 361 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + ++ ++ + PG IT + ++ G K + ++D G F +AK Sbjct: 362 TVQVNSKDLDLAPGGDITHSYAMYTGPKRESLLG------PPLNATEIMDLGIFGPVAKL 415 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 M L++ + ++GIAI+ T+ V+ +PL++KQ + MK +QP+I EL++K+ Sbjct: 416 MLWLLTTLHGFGLSYGIAIICLTIIVRGSLYPLSRKQAIGAQKMKELQPQIAELKKKYGD 475 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + L +A ++L+ +N NPLAGC PI +Q+P+FF +Y ++ ++++R P + W+ +L Sbjct: 476 D-REKLGRAQMELFSKNNYNPLAGCLPIFMQLPIFFGLYTALNNAVQLRGTP-FLWVDNL 533 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQA---MILN 521 AA D +F + +PF F + PI+ +Q K+ PPP DK Q I+N Sbjct: 534 AAPD--ALFQMPFAIPFLGDQF---NLLPIVTVGLFVMQQKLFMPPPTDKDQELQHKIMN 588 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI----MKMHGAEIGLIDRLRSTFSKN 577 +M + F PAGL +Y+ S++ I ++ ++ + +G + +K+ Sbjct: 589 YMMIGMGFMFYHVPAGLCVYFIASSLWGICERKLLDFQSKRRPSTIVGSDPNVIDVEAKS 648 Query: 578 YNSQ 581 +Q Sbjct: 649 KKTQ 652 >gi|294668107|ref|ZP_06733214.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309815|gb|EFE51058.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 409 Score = 262 bits (670), Expect = 1e-67, Method: Composition-based stats. Identities = 81/412 (19%), Positives = 145/412 (35%), Gaps = 35/412 (8%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 V A+S++I+ W+ + P+ ++ Q + + + Sbjct: 4 KRMTVFFAVSLLILLGWEKIFPTPQPAVSAVQQAGQQQTSPTIPAETGLSPAVP------ 57 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + + ++ I+ K L L Y + P L Y A+ Sbjct: 58 ------ITVSTDTVNAVIDEKSGDLRSLTLLKYDSAEDQSKPFT--LFHDGKDGIYVAQS 109 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIV 183 D V A + + ++L AN I ++ + YL I Sbjct: 110 DVVDAAGRSLTQGLSFQSAKKQYSLEGDKAEVRLTANTANGIQIDKIYTFTKGSYLVGIR 169 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDIEKS- 240 VTN S IR RI+R + + G + + K+ D++ Sbjct: 170 FDVTNRSGSPIRTDGSYRIVRDGKAPEGQGYFMANYTGPVLYTPQSGFQKVKFGDLDDDF 229 Query: 241 ------SISNFHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSDGHAR----YQAK 288 + + W+G+S Y+ S +I P S + D R Y A Sbjct: 230 KEGREQAEYERKTQSGWVGMSQHYFFSSWILQPKGGQSVCTTDACRIDIKRRSDNLYSAG 289 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + + G L+AG + + +L E++ D+G ++ A +F Sbjct: 290 VIVPQPELANGMKQGFGISLYAGPQTTSALGKIADNL-----ELIKDYGRVHWPATGLFW 344 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 LM + GN+G AI+L T+ VK++ FPL Y S A M+ + PK++ L+ Sbjct: 345 LMDKLHGFTGNWGWAIVLLTIIVKIVLFPLNNAAYKSMAKMRAVAPKLEALK 396 >gi|289548954|ref|YP_003473942.1| membrane protein insertase, YidC/Oxa1 family [Thermocrinis albus DSM 14484] gi|289182571|gb|ADC89815.1| membrane protein insertase, YidC/Oxa1 family [Thermocrinis albus DSM 14484] Length = 498 Score = 261 bits (668), Expect = 2e-67, Method: Composition-based stats. Identities = 123/568 (21%), Positives = 233/568 (41%), Gaps = 81/568 (14%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + + ++ ++A+Q + + R E+ Q D S +++ Sbjct: 7 DTKRLFIFLLVITFA-LFAYQTYLLLFRPSTPPQEKPKQ------VQKDESVPQLMLGSF 59 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 +A S + + I+ +G + Y D L++ + K + Sbjct: 60 REAQKPSETLSYRLGDFSIKISPQGGKVVSWVDEKYGKD---------LVTSTEKKLGVY 110 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 + P + N ++ I + + N + + D + Sbjct: 111 PLEIFTGD------PQKDVELNFSPYQVQGSDREISMTLQ-GNGWFVRKRLVYDGE---R 160 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 I + + I + ++F G + + D S+ D+E Sbjct: 161 IKLYIEEQGLGPIWVN-------VGTPLEEDSFYTHVGPV-LEQDGSVKRIDIKDVE--G 210 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 + + G+ +Y+ + L H+ ++S I Sbjct: 211 RQSIKGDIKFAGVESRYYFKGLV---GNIPQVVIYRLEGDHSLVVVRYSQPLI------- 260 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 L+ GAK++ + + ++D+G I KP+F+ M + Y + ++ Sbjct: 261 ------LYMGAKDYGRLR-------VLGLSEVLDYGTLRIIVKPLFVFMYWIYEHLHSWV 307 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +I++ T+ V+L+ FPL K VS + + PK+ ELREK+K P + Q+ +++LY Sbjct: 308 FSILVLTLLVRLIVFPLTYKSTVSMMRLSELAPKMQELREKYKDDPVK-FQEELMKLYAE 366 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 NP++GC PILLQIP+FFA+YKV++I+ E++ A + WI LA DP + Sbjct: 367 AGFNPMSGCLPILLQIPIFFALYKVLTITAELQLAS-FLWIPSLAQKDPYYLL------- 418 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 PI+M ++M Q +SP P DK Q +++ VVF F +SFP+GL++Y Sbjct: 419 ------------PILMGVTMIAQQWVSPAP-DKSQNLMMYVTSVVFTFLFASFPSGLVLY 465 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDR 569 W+++N+++IVQ VI + E + Sbjct: 466 WTFNNILNIVQSYVIKRFLLKEEPKRGK 493 >gi|149193808|ref|ZP_01870906.1| putative inner membrane protein translocase component YidC [Caminibacter mediatlanticus TB-2] gi|149135761|gb|EDM24239.1| putative inner membrane protein translocase component YidC [Caminibacter mediatlanticus TB-2] Length = 511 Score = 261 bits (668), Expect = 2e-67, Method: Composition-based stats. Identities = 136/577 (23%), Positives = 250/577 (43%), Gaps = 71/577 (12%) Query: 1 MERN--WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N +A +S + +A+ F + P+I++ E + Q N+ + L Sbjct: 1 MENNNLRRIILATVISFVFFFAYDYFVLQPQIKQGVKENNITKVTTQENKKVKKERSNLK 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D +++ + I+ G + L+ + L PS Sbjct: 61 IDVVA--------KIEAKNYEVKIDSLG-RISSFILKQNKFNTEKGQ--HLELIPSKLPK 109 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK-NANNILFERTISLDEH 177 N + NT + I P K++ N ++ ++ ++ + Sbjct: 110 PLEIRF----EDNELNKKAFNTKVEVDKKLIKLNNKPQKIIITQNLGKVILKKIVTFYPN 165 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 + + T+ N ++P A + + G + D +L K D Sbjct: 166 GRYDVEVTLNKNVN-------YFISPGYRPNVAIDQLTIH-GALIKKADGTLDIIKDGDA 217 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 +I+N + D+Y+ ++F F + + I Sbjct: 218 TAKTINNAIIVAGF----DRYYTTLF-----------FSKNPLNAVVIPDEEKNPVLFIK 262 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 K + + G K + + P ++ +G F A+ +F+L+ + Y + Sbjct: 263 DNKDLKLIG--YIGPKYVDVLKSID-----PELVDVVQYGVGTFFARNLFLLLDFLYKIS 315 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+GIAI+L + V+++ FPL K VS +K + PK+ E++E++K+ P Q LQ M++ Sbjct: 316 HNWGIAIILLVILVRIVLFPLTFKGMVSMYKLKELAPKMKEIQERYKKDP-QKLQMHMMK 374 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK H NPL GC P+LLQIP+F+ IYK++ S+E++ A + WIKDL+ DP I Sbjct: 375 LYKEHGANPLGGCLPLLLQIPIFYGIYKLLLYSIELKGA-HFLWIKDLSEMDPYFIL--- 430 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 P++M ++M+I K++P D Q I ++PVVF +++FPA Sbjct: 431 ----------------PVLMGITMYIHQKLTPTNFQDPMQEKIFKFLPVVFTIMMATFPA 474 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 GL++YW+ +N++SI+QQ +I K+ ++ LI + ++ Sbjct: 475 GLVLYWTVNNILSILQQVLINKIMESK-KLIAKAKNE 510 >gi|228472035|ref|ZP_04056803.1| inner membrane protein OxaA [Capnocytophaga gingivalis ATCC 33624] gi|228276647|gb|EEK15360.1| inner membrane protein OxaA [Capnocytophaga gingivalis ATCC 33624] Length = 616 Score = 261 bits (666), Expect = 3e-67, Method: Composition-based stats. Identities = 126/621 (20%), Positives = 238/621 (38%), Gaps = 71/621 (11%) Query: 1 MERNWN---YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA--- 54 ME N + AL +++ + P+ + Q+ Q S Sbjct: 1 MEEKRNNTFSLIGFALMFVVLIYYMYNQKPPQQTTESTNNTTQQSSSQQVATPASTTLPT 60 Query: 55 -------------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 A + E++N + ++ KG Q +L ++ Sbjct: 61 DSLGLSKYKETLGAFGFSAALPSAKEGAFTEIENNLIKLQVSNKGGQITNLLVKNQKT-- 118 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 N V L+ N A T N+ + ++ S + T +KL Sbjct: 119 -YNGKPVELIKDGN------ASFSLKFTTNDNRTLETKDLF--FSPTLSGNTLSMKLHVS 169 Query: 162 NANNILFERTISLDEHYLFKIVD------TVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + + + T+ DE Y+ V N + ++ + + + Sbjct: 170 DNQYLEYVYTLRPDE-YMVDFSIRSVGLSQVFNTGVTPELLW---KLKARRMEKSVTYED 225 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI---PSKETSFH 272 + D + S +S W+ ++S I P Sbjct: 226 RYVQAVVQYEDNRDDKLS----AGGEDSEEFKSIKWVDFKQHLFSSFLISDKPLASGKIS 281 Query: 273 SQFKYLSDGHARYQAK-FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 S+ S+G K F+A ++ + F G ++ Y+K+ + + Sbjct: 282 SKNLATSEGDNVQATKAFAAEFPIAFTSGELSESLHFFYGPSDYHIFKKYDKEYGLTK-A 340 Query: 332 MLIDWGWFYFIAK----PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + + WG F +I K P+F L+S F + G+AI++ T+ V++L P+ K Y+S A Sbjct: 341 IPLGWGIFGWINKWFVIPVFDLLSSFMAV----GVAIIVLTIIVRILLSPIQYKSYLSQA 396 Query: 388 NMKNIQPKIDELREKFKQSP-PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 MK ++P+I+E+ K+K S Q+ + LY +NPL+GC P LLQ+PVFFA++ Sbjct: 397 KMKVLRPEIEEINNKYKGSENAMKRQQETMALYSKAGVNPLSGCIPALLQMPVFFALFSF 456 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + +R + W +DL++ D + L +PFY HV ++PI+ S++M I M Sbjct: 457 FPTAFMLRQKS-FMWAEDLSSYD--AVAQLPFSIPFYG---NHVSLFPILASVTMLIYML 510 Query: 507 MSPPPADKG-------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 M+ + ++ P++ +F +++ +GL +Y+ SN+I+I I Sbjct: 511 MTTGQMQQTKQEGMPDMRFMMYLSPIMMLFFFNNYASGLSLYYFISNLITIFIMLAIKYW 570 Query: 560 HGAEIGLIDRLRSTFSKNYNS 580 E + +++ K Sbjct: 571 IIDEKRIHAKIQENKQKPRKE 591 >gi|218960871|ref|YP_001740646.1| Preprotein translocase subunit YidC (modular protein) [Candidatus Cloacamonas acidaminovorans] gi|167729528|emb|CAO80439.1| Preprotein translocase subunit YidC (modular protein) [Candidatus Cloacamonas acidaminovorans] Length = 543 Score = 261 bits (666), Expect = 3e-67, Method: Composition-based stats. Identities = 118/560 (21%), Positives = 225/560 (40%), Gaps = 56/560 (10%) Query: 19 YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78 + W+ + + E+ N + + QTV +P + D ++D ++L N + Sbjct: 22 FVWKPQQLRQQQEQQNRQTQTPQTVTEPVKPDTIIITPMLDTLLAKGKTPEIIKLSNQLM 81 Query: 79 IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138 + N +G + L + + +S V L+ +N+ A++ + L + Sbjct: 82 TVTFNSRGGSIQQVELHNF---IMHDSTKVKLI----PENSSLADVKLIHPTAETPLKDV 134 Query: 139 NTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN-NSIDQIRFS 197 + + + + + N ++ +LD Y V N I+ I Sbjct: 135 IFQYRISP-----DSLGVTFFLGDETNSQISKSFALDNQYGISFSINVENYQVINGIEVD 189 Query: 198 PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257 I + T + Q+ D + + + ++K S S +W+ + K Sbjct: 190 FSCGIADTETVTKSKQ---QDYRFMYYADNEIFKTTLAKMKKKQPSGNLNSFNWMALRGK 246 Query: 258 YWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317 Y+ V + + F + P +S + + ++AG ++ Sbjct: 247 YFTLVL--KENEPALVRSFRTELNPQTGNPAFVIDSKQSNPKQSWSQSFIIYAGPTDYQI 304 Query: 318 IHHYEKDLA-IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + Y K + IP W ++A ++ + + + N+G+ I++ V +KLL Sbjct: 305 LQKYGKQMDNIPERGAS----WLRWLANIFEWILKFLHRYIKNYGVVILIFAVIIKLLLH 360 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 PL + Q V + + +QP I+E+R+K+ + ++ + +LYK + + AGC P+L+Q Sbjct: 361 PLTQHQMVHSMRQQKMQPYIEEIRKKYANDVVK-QREELTKLYKENKTSMTAGCLPLLIQ 419 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 IP+ +Y V+ SL+MR+A F W+KDL+ DP I PII Sbjct: 420 IPILIPLYNVLRYSLDMRNASFCLWLKDLSEPDPYMIL-------------------PII 460 Query: 497 MSLSMFIQMKMS-PPPADKGQA------------MILNWMPVVFVFALSSFPAGLIIYWS 543 M M +Q M P D Q ++ MP+ V PAGL++YW+ Sbjct: 461 MGGFMLLQSLMMRPKNVDTSQMTEQQKMQQSQMKIMTWGMPIFMVIIFRGMPAGLVLYWT 520 Query: 544 WSNVISIVQQAVIMKMHGAE 563 NV+SI+ Q + K + Sbjct: 521 AFNVLSILHQYFLTKHLKKK 540 >gi|282879875|ref|ZP_06288602.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella timonensis CRIS 5C-B1] gi|281306269|gb|EFA98302.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella timonensis CRIS 5C-B1] Length = 626 Score = 260 bits (665), Expect = 5e-67, Method: Composition-based stats. Identities = 116/605 (19%), Positives = 242/605 (40%), Gaps = 52/605 (8%) Query: 11 IALSVIIVYAWQNFYVYPRIEEMNN--ERKNIQTVKQPNQVDNSYAAVLIDDR------- 61 + L +++ + ++ P EE ++ +I V Q A + Sbjct: 4 LVLMGLLLIGFS-WWSQPSAEEQAKKMQQDSIAAVTQHKAELAKQQAHAKEIADLKAKQK 62 Query: 62 --------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A + V LKN L S+N KG ++ + + P V L Sbjct: 63 ADTTALFHAALEGQAQEVVLKNEHLELSVNTKGGTVSKAIIKNFKDREDN--PDVVLFDD 120 Query: 114 SNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 K + + ++T + P++ T L + + ++ + L + Sbjct: 121 KVQKLNFIMSTKEANIATQDLYFSPSAQTDSTLTLTADAGQGKSLVIQYRLGADYLLHMS 180 Query: 172 ISLDE-HYLFKIVDTVTN-NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 + ++ + LF N + D+ R +G ++ AT T+ +G Sbjct: 181 MKVNGMNGLFAPNTKFMNVDWTDKCRQQEKGFTFENR--YATLTYHKVKGGT-------- 230 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDGHARYQAK 288 +K S+ + + W+ ++++++V I + S + + + + Y Sbjct: 231 --KKLSEASEEIDKKIDDKIDWVAFKNQFFSAVMIAKHDFSEEALMTSVPQEKGSGYLKA 288 Query: 289 FSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWFYFIAK 344 + A T P + + G +F ++ EK+ + + L+ GW F Sbjct: 289 YQAKMQTFFDPTGQKASEFEFYFGPNDFRLLNRIEKESTFNKDLELQRLVYLGWPLFRII 348 Query: 345 PMFMLMSYFYNLVGNF--GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 + + F L F G+ ++L T+ +KL+ +P+ KK Y+S+A M+ ++PK++ + Sbjct: 349 NRWFTIYVFDWLSKWFPMGVVLILITLLLKLITYPMVKKSYMSSAKMRVLKPKLEAATAQ 408 Query: 403 FKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + ++++R + W Sbjct: 409 YNKPEDQMQKQQAMMAEYSKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGES-FLW 467 Query: 462 IKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-QMKMSPPPADKG 515 I DL+ DP NI+ + L F + M++ QM K Sbjct: 468 INDLSTYDPIIQWNKNIWLIGDHLSLTCILFCIANVLYSWMTMRQQRDQMVGQQAEQMKM 527 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 ++ MPV+F F + + AGL Y+ S S + K + L+ L + + Sbjct: 528 MQWMMYLMPVMFFFMFNDYSAGLNFYYFVSLFFSAAIMWTLRK-TTNDAKLLQILEARYE 586 Query: 576 KNYNS 580 +N + Sbjct: 587 ENKAN 591 >gi|326800909|ref|YP_004318728.1| membrane protein oxaA [Sphingobacterium sp. 21] gi|326551673|gb|ADZ80058.1| Membrane protein oxaA [Sphingobacterium sp. 21] Length = 609 Score = 260 bits (664), Expect = 6e-67, Method: Composition-based stats. Identities = 126/617 (20%), Positives = 244/617 (39%), Gaps = 67/617 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK---NIQTVKQPNQVDNSYAAVL 57 M+ N F + L +II+ F++ P EE+ E++ +I K P + + Sbjct: 1 MD--RNTFTGLFLIMIILAG-SVFFMKPSEEEIKKEQQLQDSIAQAKSPETKKTTDSLFA 57 Query: 58 IDDRAQALSM----------------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 +A ++ + L+N + +I+ KG + + ++G + Sbjct: 58 AQQGLEASTVDSTQMSGPFGGAKVGNEELISLENEFIKATISTKGGRVKSVEVKGEKDYL 117 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDY-VSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 P+V N F+ ++T + +P + + + + + ++L + Sbjct: 118 GK--PLVLFGGDKNRFGLQFSTAGVNINTNDLYFIPQAKEPIVVENTD--SASLIMRLSY 173 Query: 161 KNANNILFERTISLDEHY---LFKIV----DTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 I + SL + F IV V + ++ + + + + + Sbjct: 174 AENKYIDY--VYSLKGNSHQLGFTIVTKGMQDVVAPTETKLVLNWQADLPQKEKDMKDER 231 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 F GD + + + + W+ Y+++V I + Sbjct: 232 NRSTAYFKEFDGDVNELSTTKDETKD------VGKTDWISFKQHYFSNVLIAKNSFN-GG 284 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSI-TTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 K + F+AN + + T + G +F + DL E Sbjct: 285 TLKVSTVNSDEIVKSFAANMSLDFNRQDVNTYPMSFYFGPNKFSILKDQGHDL-----EK 339 Query: 333 LIDWGWF------YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 I+ GW FI P+F L+ F N+G+ I + TV +K++ PL K YVS Sbjct: 340 QINMGWGPMKWINRFITLPVFNLLEGFN---WNYGLIIFVLTVLLKIVLSPLTYKSYVSM 396 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ ++P++DE++ K + +LQ+ ++LYK +NP+ GC P+LLQ+P A + Sbjct: 397 AKMRVLKPEMDEIKAKVGEDNQTLLQQEYLKLYKQAGVNPMGGCIPMLLQMPFMIAFFFF 456 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 E+R + W+KDL+ D F + I+ H+ + I+M+ + + Sbjct: 457 FPNLFELRGES-FLWMKDLSTYDSIVNFPMIPII-----NINHISLMCILMTCATLLSTW 510 Query: 507 MSP--PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + A I +MP++F F L+S+PAGL Y+ S ++ V Q I + E Sbjct: 511 YNNMVSGATGQMKYIGYFMPLIFFFVLNSYPAGLNYYYFLSTCLTFVIQFFIRQSINDE- 569 Query: 565 GLIDRLRSTFSKNYNSQ 581 + +++ K S+ Sbjct: 570 KIHAMIQANKKKPEASK 586 >gi|332882339|ref|ZP_08449967.1| membrane protein insertase, YidC/Oxa1 family domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679723|gb|EGJ52692.1| membrane protein insertase, YidC/Oxa1 family domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 629 Score = 259 bits (661), Expect = 1e-66, Method: Composition-based stats. Identities = 128/625 (20%), Positives = 245/625 (39%), Gaps = 76/625 (12%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKN------IQTVKQPNQVDNSY 53 M++N F+ IA ++ + F P EM +R+ Q Q Q Sbjct: 1 MDKNTLTGFILIA---AVLIGFSYF-SRPSEAEMEAQRRQDSIATVAQQKAQMAQEAKEE 56 Query: 54 AAVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 A + + + S V L+N + + N +G + L+ Y + Sbjct: 57 AEIAHQAQVALDTTSLFYAHRRGEAQNVVLENELIKLTFNTRGGTVQKVELKEYK---NQ 113 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 VTL + A + ++ + + + + I + T ++L Sbjct: 114 QGGPVTLFDEKD------ARMQFMLGGKTENINSGDFFFTPI--NVSDTTLTMRLQASTG 165 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM----------RHKPQTATNT 213 + F+ + L Y+ T+ N + I F+P + + + K + Sbjct: 166 GTLDFDYKL-LPHSYMID--FTIQANGLGNI-FAPSMKTLDIAWNEMARQQEKGFDFESR 221 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + I G L E + E W+ +++++ V I ++ + Sbjct: 222 YSSLTYKIKNEGTDYLSETS------AESEKIAEPLDWVAFKNQFFSCVLIAHQDFTEAH 275 Query: 274 QFKYLSDGHARYQAKFSANEITI--LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR-- 329 + Y + A+ T GK+ T LFA + + H K A + Sbjct: 276 LSSTPQQKASGYLKDYEADMKTFFDPSGKTPTQMQMLFA-PNNYHLLQHTNKLSASDKDL 334 Query: 330 -FEMLIDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 E L+ GW F F ++ + +L + GI ++L T+ VK+L +P +K Y+S Sbjct: 335 ELEDLVYLGWPLFKWINRFFIIYIFDWLSSLGLSMGIVLLLLTILVKVLVYPTTRKSYLS 394 Query: 386 TANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +A M+ ++PKIDEL K+ K Q+ +QLY + ++P+ GC P+LLQ+P++ A++ Sbjct: 395 SAKMRVLKPKIDELNAKYPKPEDAMKKQQETMQLYSQYGVSPMGGCLPMLLQMPIWIALF 454 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSL 499 + ++E+R + W DL+A D +I+ + L + F I+ + Sbjct: 455 NFVPNAIELRGES-FLWASDLSAYDDVIRWDKSIWLIGDHLSIFCLLFCLTN---IVNTW 510 Query: 500 SMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 Q + S Q ++ MPV F F +++ +GL Y+ S + SI+ Sbjct: 511 ISMRQQQNSMTGEQAQQMKFMQYMMYIMPVAFFFMFNNYSSGLNYYYFLSGLTSILIMWF 570 Query: 556 IMKMHGAEIGLIDRLRSTFSKNYNS 580 + K + L+ +L + + N + Sbjct: 571 LRKTTDDK-KLLAKLEANYQANKAN 594 >gi|91228357|ref|ZP_01262285.1| putative inner membrane protein translocase component YidC [Vibrio alginolyticus 12G01] gi|91188117|gb|EAS74421.1| putative inner membrane protein translocase component YidC [Vibrio alginolyticus 12G01] Length = 227 Score = 259 bits (661), Expect = 1e-66, Method: Composition-based stats. Identities = 94/238 (39%), Positives = 146/238 (61%), Gaps = 21/238 (8%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P ++++D+GW +FIAKP+ ML+S+ + VGN+G+AI+ T V+ +PL K QY S Sbjct: 5 APNLDLVVDYGWLWFIAKPLHMLLSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSM 64 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QPK+ +RE+ Q + + M++LYK +NPL GC P++LQ+P+F A+Y Sbjct: 65 AKMRMLQPKLQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWA 123 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + S+E+RH+PF+GWI DL+A DP I P++M SMF+ K Sbjct: 124 LMESVELRHSPFFGWIHDLSAQDPYYIL-------------------PLLMGASMFLIQK 164 Query: 507 MSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 MSP D Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K + Sbjct: 165 MSPTTVTDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYKGLEKK 222 >gi|163782852|ref|ZP_02177848.1| hypothetical protein HG1285_15991 [Hydrogenivirga sp. 128-5-R1-1] gi|159881973|gb|EDP75481.1| hypothetical protein HG1285_15991 [Hydrogenivirga sp. 128-5-R1-1] Length = 514 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 118/569 (20%), Positives = 218/569 (38%), Gaps = 76/569 (13%) Query: 5 WNYFVAIALSVIIVYAWQ----NFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 F+A+ L ++ ++ F+ + + E+ KQ Sbjct: 11 KRIFIAMTLVAFLLLGYEIFSSFFFKGTPQQPVQQEKTEEPVKKQETPGGKKVEEPPTPQ 70 Query: 61 RAQALSMSPRVELKNPSLI-----GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + + I+ KG + V + Sbjct: 71 LMLGTTREKHKPAETLKYSMGGFSVEISPKGGKIVSF--------VDEQFGFDLITDAEK 122 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 N Y E+ + +L N +++ L F+ I + + Sbjct: 123 KLNVYPLEIYTGDPDIDYDLNFGNYSVERKDNRLI-------LTFRKGK-IKLTKELEFK 174 Query: 176 EHY-LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 + Y L + + + P + +F EG + L +V Sbjct: 175 DAYVLLTVKGDLDKKFYVLVGTHPFEQ-----------SFYTHEGPVLKLN-GEVVRIDK 222 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D+ K + + G +Y+ F K + Y+ + E Sbjct: 223 DDVSKREF--IEGNIEFAGEESRYFF--------KGFKGNIKRVVINKVNYKPEGEEGEK 272 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I T T + Y L E L+DWG KP+F+ M + Y Sbjct: 273 EI------TFTYVGYEEPLTLYMGAKYYSRLRELGLEDLLDWGMLKVAVKPLFIFMYWVY 326 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 G++ ++I++ T ++++FFPL K S ++ P+++++++K+K P + +Q+ Sbjct: 327 EHTGSWVLSIVILTFLLRVVFFPLNYKSTTSMMKLQQAAPQLEKIKKKYKDDPAK-MQQE 385 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LY NP++GC PIL+QIPVFFA+YKV+ I+++++ + WI LA DP I Sbjct: 386 MMKLYSEIGFNPMSGCLPILVQIPVFFALYKVLIITVDLKLSGM-LWIPSLADKDPFYIL 444 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 P+IM L+M +Q K++P P D Q +I+ V F F +SF Sbjct: 445 -------------------PVIMGLTMILQQKVTPNP-DPKQNLIMYISAVAFTFLFASF 484 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+GL++YW+ +N+++I Q +I + + Sbjct: 485 PSGLVLYWTVNNILNIGQNYLIKNVMLKK 513 >gi|330752544|emb|CBL87491.1| inner membrane protein translocase component YidC [uncultured Flavobacteria bacterium] Length = 564 Score = 258 bits (660), Expect = 2e-66, Method: Composition-based stats. Identities = 121/576 (21%), Positives = 250/576 (43%), Gaps = 44/576 (7%) Query: 12 ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRV 71 + + IV + N +++P+ + E + Q+++ ++ DN + D + Sbjct: 12 FVLIAIVLIFFNVFIFPKFQPEEKETAS-QSIQDFSRNDNLLKNEEVLDD---IISEKLF 67 Query: 72 ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN 131 L+N + I+ G + +++ L+ Y + + + L + +T + LD+++ N Sbjct: 68 TLENEKIKLLISNIGGRINEVILKEYK---NYSGDELKLFTADSTSFS----LDFLTNKN 120 Query: 132 NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSI 191 I+ N N + S L KL +N+ + ++D Y + + Sbjct: 121 -IKTENRNFIAIDSSSNFL------KLRCLVSNDSYIDYVYTIDNDYKVDLDLEFY--GL 171 Query: 192 DQIRF----SPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE 247 D++ PQT + + K+ E + K S + Sbjct: 172 DELIPRNVNYMNLEWKMKTPQTEKSKKNQEMYTGIYYQFKADNEVDNLSLTKDSEKDIKS 231 Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 + +W+ ++++++FI S K + ++ Y + SA S +F Sbjct: 232 NLNWVAFKQQFFSAIFISKNGFSKPISLKVSKNENSIYIKELSAKFEIPYGHNSTEKHSF 291 Query: 308 -LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS---YFYNLVGNFGIA 363 + G +PT+ +Y+ FE +I GW F +++++ + N+G+ Sbjct: 292 QFYFGPNHYPTLKNYDS-----GFEEIIPLGWSLFRWVNKYIIINLFDFLSKYFNNYGLI 346 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ +KL P K Y+S A MK ++P+ID++ + K P +Q+A + LY+ Sbjct: 347 ILLLTIIIKLALAPFTYKAYLSQAKMKVLKPEIDKISD--KDKDPMKVQQATMNLYRKAG 404 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+ GC P+L Q P+ A+++ S+E+R + W DL+A D +I L +PFY Sbjct: 405 VNPMGGCLPMLFQFPILIAMFRFFPASIELRQKS-FLWADDLSAYD--SILELGFNIPFY 461 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPVVFVFALSSFPAGLII 540 HV ++ ++M++S + +M+ ++ MP++F+ +++ AGL Sbjct: 462 GD---HVSLFTLLMTISTLLYTRMNTSMATGQMAQMKWMMYLMPIMFLGFFNNYAAGLSY 518 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 Y+ +N+ + QQ + K + L+ + K Sbjct: 519 YYFLANMFTFGQQYFMKKFFINDDALLAEIEKNKRK 554 >gi|330996282|ref|ZP_08320167.1| membrane protein insertase, YidC/Oxa1 family domain protein [Paraprevotella xylaniphila YIT 11841] gi|329573474|gb|EGG55081.1| membrane protein insertase, YidC/Oxa1 family domain protein [Paraprevotella xylaniphila YIT 11841] Length = 629 Score = 258 bits (660), Expect = 2e-66, Method: Composition-based stats. Identities = 128/625 (20%), Positives = 246/625 (39%), Gaps = 76/625 (12%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKN------IQTVKQPNQVDNSY 53 M++N F+ IA ++ + F P EM +R+ Q Q Q Sbjct: 1 MDKNTLTGFILIA---AVLIGFSYF-SRPSEAEMEAQRRQDSIATVAQQKAQMAQEAKEK 56 Query: 54 AAVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 A + + + S V L+N + + N +G + L+ Y + Sbjct: 57 AEIAHQAQVALDTTSLFYAHRRGEAQDVVLENELIKLTFNTRGGTVQKVELKEYK---NQ 113 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 VTL + A + ++ + + + + I + T ++L Sbjct: 114 QGGPVTLFDEKD------ARMQFMLGGKMENINSGDFFFTPI--NVSDTTLTMRLQASTG 165 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM----------RHKPQTATNT 213 + F+ T+ L Y+ + T+ N + F+P + + + K + Sbjct: 166 GTLDFDYTL-LPHSYM--VDFTIRANGLGNF-FAPSMKTLDIAWNEMARQQEKGFDFESR 221 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + I G L E + E W+ +++++ V I ++ + Sbjct: 222 YSSLTYKIKNEGTDYLSETS------AESEKIAEPLDWVAFKNQFFSCVLIAHQDFTEAH 275 Query: 274 QFKYLSDGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHHYEKDLAIPR-- 329 + Y + A+ T GK+ T LFA + + H K A + Sbjct: 276 LSSTPQQKASGYLKDYEADMKTFFDPNGKTPTQMQMLFA-PNNYHLLQHTNKLSASDKDL 334 Query: 330 -FEMLIDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 E L+ GW F F ++ + +L + GI ++L T+ VK+L +P +K Y+S Sbjct: 335 ELEDLVYLGWPLFKWINRFFIIYIFDWLSSLGLSMGIVLLLLTILVKVLVYPTTRKSYLS 394 Query: 386 TANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +A M+ ++PKIDEL K+ K Q+ +QLY + ++P+ GC P+LLQ+P++ A++ Sbjct: 395 SAKMRVLKPKIDELNAKYPKPEDAMKKQQETMQLYSQYGVSPMGGCLPMLLQMPIWIALF 454 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSL 499 + ++E+R + W DL+A D +I+ + L + F I+ + Sbjct: 455 NFVPNAIELRGES-FLWASDLSAYDDVIRWDKSIWLIGDHLSIFCLLFCLTN---IVNTW 510 Query: 500 SMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 Q + S Q ++ MPV F F +++ +GL Y+ S + SI+ Sbjct: 511 ITMRQQQNSMTGEQAQQMKLMQYMMYIMPVAFFFMFNNYSSGLNYYYFLSGLTSILIMWF 570 Query: 556 IMKMHGAEIGLIDRLRSTFSKNYNS 580 + K + L+ +L + + N + Sbjct: 571 LRKTTDDK-KLLAKLEANYQANKAN 594 >gi|163755913|ref|ZP_02163030.1| putative inner membrane protein translocase component YidC [Kordia algicida OT-1] gi|161324084|gb|EDP95416.1| putative inner membrane protein translocase component YidC [Kordia algicida OT-1] Length = 640 Score = 258 bits (660), Expect = 2e-66, Method: Composition-based stats. Identities = 118/560 (21%), Positives = 227/560 (40%), Gaps = 73/560 (13%) Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG------YHLDVSSNSPIVTLLSPS 114 A +S L+N L I+ KG Q + ++G + V+ +S V L+ Sbjct: 88 NADKVSADKVTTLENQLLSLKISNKGGQIVEARVKGQMVKGEFEPLVTYDSLPVYLVKDG 147 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 N A T + + N+ + + + + + K A + E + Sbjct: 148 N------ASFGLNLTTTDNRVINTKDLAFEPNYSENGDSKVLSMKLKVAADKYLEYRYEI 201 Query: 175 DEHYLFKIVDT------VTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 + Y+ V N S I + + RH + + Sbjct: 202 KDDYMVDFSVRSQGLNGVINAS-QPINMEWKLKSFRHAKS------------VTYENRYT 248 Query: 229 LVEQKYSDIEKSSISNFHES-----NSWLGISDKYWASVFIPSKETSFHSQF------KY 277 + +Y D + S + + +WLG ++ S+ + + Sbjct: 249 DLHYEYDDGKDSYLGQATDEEKINDVTWLGYKQHFFTSILLTDDPFKTATISTENIVDSE 308 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + + + F A L G + T L+ G ++ + Y+++L + ++ G Sbjct: 309 MPEKDVEFLKNFGATIPLELKGGELNYTMDLYHGPTDYDILSKYDRNL-----DEIVPLG 363 Query: 338 WFYFIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W F F L+ F L+ +F GIAI++ T+ V+LL P+ K Y+S A MK I+P Sbjct: 364 WGIFGWINRFFLIPLF-GLLSSFLPAGIAIIVMTILVRLLLSPITYKSYLSQAKMKVIRP 422 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +I+E+ EK+K + Q+ ++LY ++P+AGC P L+QIPVF+A++ + E+R Sbjct: 423 EINEINEKYKDDAMKK-QQETMKLYGKAGVSPMAGCIPALMQIPVFYALFMFFPSAFELR 481 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + W +DL++ D I L +P Y H+ ++PI+ S+++F M+M+ Sbjct: 482 QKS-FLWAEDLSSYD--TIAQLPFNIPVYGD---HISLFPILASIAIFFYMRMTTGQQMS 535 Query: 515 GQAM---------------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ + P++ +F +++ +GL +Y+ SN+I+I VI Sbjct: 536 SMQQPTQEGMPDMSKMMKYMMYFSPLMMLFFFNNYASGLSLYYFVSNLITIGIMLVIKNY 595 Query: 560 HGAEIGLIDRLRSTFSKNYN 579 + ++ K Sbjct: 596 IIDNDKIHAQIEENKKKPKK 615 >gi|150025942|ref|YP_001296768.1| inner membrane protein translocase component YidC [Flavobacterium psychrophilum JIP02/86] gi|149772483|emb|CAL43966.1| Inner membrane protein OxaA [Flavobacterium psychrophilum JIP02/86] Length = 633 Score = 258 bits (660), Expect = 2e-66, Method: Composition-based stats. Identities = 124/626 (19%), Positives = 240/626 (38%), Gaps = 78/626 (12%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEE----MNNERKNIQTVKQPNQVDNSY 53 ME+ N + L I+ W + P E E + NS Sbjct: 1 MEKKKLDLNSIIGFVLIFGIMM-WIMYQNKPTQAEIDKKAKQELTEKTKSEANQVAKNSQ 59 Query: 54 AAVLIDDRAQAL-----------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 +L D Q + S L+N L+ I KG + L+ Sbjct: 60 KTILPTDSVQVAKMKATLGSFAYSATLPSAKSEFTTLENELLVLKIANKGGYIAEATLKN 119 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 + + +V L+ +N + T N +L T+ + + +IL+ Sbjct: 120 FKQISKDSGKLVQLIKDNNAGLNITLQTQDNRTLNTKDLFFEPTLTKVGTNQILS----- 174 Query: 157 KLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + K N E L + Y+ V + + + + KP Sbjct: 175 -MKLKAGANQFLEYKYVLKPNDYMLD--FDVHSQGLASV-------LNTTKPADLEWDLK 224 Query: 216 VQEGFIAVLGDKSLVE--QKYSDIEKSSISNFHES------NSWLGISDKYWASVFIPSK 267 ++ + + +Y D + +++ + +++ +++S+ + + Sbjct: 225 SYRSEKSISNENRFTDIRYEYEDGKHNNVGQGKDKEETLDKVTYVAFKQHFFSSILLTNT 284 Query: 268 ETS----FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 + S G Y F AN + + G ++ + Y K Sbjct: 285 PFEKAKLYSSNVVDEEKGDTIYTKHFKANVPLAFNNGEVDYKMNWYYGPSDYKLLKDYHK 344 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKK 381 +L E +I GW F MF+ M F L + GIAI++ TV +K+ P+ K Sbjct: 345 NL-----EKIIPLGWGIFGWINMFIFMPLFGFLSSYISLGIAIIVFTVIIKIAMSPITYK 399 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 ++S A MK ++P+I+EL EKF + P + Q+ ++LY +NP+AGC P L+QIP + Sbjct: 400 SFLSQAKMKVLRPEINELNEKFSKDPMKK-QQETMKLYNKAGVNPMAGCIPALIQIPFMY 458 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLS 500 A ++ ++E+R + W +DL++ D + + +P + HV ++ ++ +++ Sbjct: 459 ASFQFFPSAIELRQKG-FLWSQDLSSFD--TVLSWKQHIPIISSVYGNHVSLFALLAAIA 515 Query: 501 MFIQMKMS-------------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 +F KM+ P K M+L P++ + +++ +GL +Y SNV Sbjct: 516 IFFYTKMTAGDQQMQAPQQEGMPDMAKIMKMMLYISPIMMLIFFNNYGSGLSLYTLISNV 575 Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRST 573 I+I VI + + +++ Sbjct: 576 ITIGIMFVIKRYIVDNDKIHAQIQEN 601 >gi|254495503|ref|ZP_05108427.1| 60Kd inner membrane protein [Polaribacter sp. MED152] gi|85819859|gb|EAQ41016.1| 60Kd inner membrane protein [Polaribacter sp. MED152] Length = 625 Score = 258 bits (659), Expect = 2e-66, Method: Composition-based stats. Identities = 123/628 (19%), Positives = 255/628 (40%), Gaps = 74/628 (11%) Query: 1 MERNW---NYFVAIALSVIIVYAWQN-----------FYVYPRIEEMNNERKNIQTVKQP 46 ME+ N F+ + L + + W NN+++N + + P Sbjct: 1 MEQKKFDYNSFIGMIL-LAGILLWYFNTNKPEELEEQQPQEIVETTSNNDKENTKNIAAP 59 Query: 47 NQVDNSYAAVLIDDRAQALSMSP------RVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 ++S + + ++ A + S ++N + +I+ KG Q ++ Y Sbjct: 60 VFENDSLKQIALQNKLGAFAQSALNGKEGTTVIENSLVKLTIDNKGGQIVKALVKNYQT- 118 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 +S + ++ +N +++ +T N I ++ +KL Sbjct: 119 --YDSLPLYMIKDNNAS----FNINFGTTDNRILNTKDLFFEPSLTNSGENTVLSMKLKV 172 Query: 161 KNANNILFERTISLDEHYL-FKIV----DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 ++ + + + D++++ F I D V N S + I RH+ T Sbjct: 173 SDSQYLEYRYEVKPDDYFVDFSIRSQGLDGVFN-SSNPINLDWTLDGFRHERSLKTEN-- 229 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI---PSKETSFH 272 + KS E +Y + + I+N W+ ++ S + P + Sbjct: 230 ---TMYSYYYYKSEDEVEYLNAGNTEIAN---DIDWVAYKQHFFMSNLLTDTPFNNATVT 283 Query: 273 SQFKYLSDG-HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 S + + ++ L G + F G ++ + K + Sbjct: 284 SSDLVEDEKLDTVFTKRYELKTPLALTGGELNYNMKWFYGPSDYNLL----KTFEGTDLD 339 Query: 332 MLIDWGW--FYFIAKPMFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 D GW F F+ + +F + + + N+G+ I+L T+ V++L PL K Y+S+A Sbjct: 340 ETADLGWGIFGFLNRNVFYPVFNLLEGFLTNYGLIIILMTIVVRILMSPLVYKSYLSSAK 399 Query: 389 MKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 MK I+P++ EL +K+ + Q+ + + + +N ++GC P LLQ+P+FFA++K Sbjct: 400 MKVIRPELQELNKKYPGKENAMKRQQETMAIQRKAGVNMMSGCIPALLQMPIFFALFKFF 459 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++ +R + W DL++ D IF L +PFY HV ++PI+ S+++F M+M Sbjct: 460 PTNIALRQES-FLWAPDLSSYD--VIFNLPFEIPFYGD---HVSLFPILASIAIFFYMRM 513 Query: 508 SPPPADKGQA----------MILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + QA ++ +M P++ + + + +GL +Y+ SN+++I Sbjct: 514 NQSQQANMQAPTQEGMPDMSKMMKYMIYFSPIMMLIFFNRYASGLSLYYFISNLLTISIM 573 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 VI E + ++ + ++ Sbjct: 574 LVIKNYVIDEEKIHAQIEENKKRPEKAK 601 >gi|281357428|ref|ZP_06243916.1| membrane protein insertase, YidC/Oxa1 family [Victivallis vadensis ATCC BAA-548] gi|281316031|gb|EFB00057.1| membrane protein insertase, YidC/Oxa1 family [Victivallis vadensis ATCC BAA-548] Length = 590 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 139/603 (23%), Positives = 244/603 (40%), Gaps = 67/603 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYP------------------------RIEEMNNE 36 M+ + +AIA+ ++++ W+ F Y + + Sbjct: 1 MKFDKETLIAIAVCCVVLFGWEPFSRYMGWSAAPVPPAAAAPAAAPQPNTEVPVSAVPAA 60 Query: 37 RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS---PRVELKNPSLIGSINLKGAQFDDLN 93 T + V AV +AL P VELKN ++ S + + Sbjct: 61 APQPNTEVPVSAVPAVEPAVPEKKTQEALVQVSPLPPVELKNKDMVLSFDPVRGSIRSIT 120 Query: 94 LRGYHLDVSSNSPIVT--LLSPSNTKNAYFAELDYVSTA---NNIELPNSNTVWNLISGK 148 L Y + + ++ IV S + Y A + +V T N +E + L+ + Sbjct: 121 LEHY-QNAARDARIVLDQSFSSQGALSLYQAGVPWVVTQVVKNRVEPGSDGQSRYLLDRR 179 Query: 149 ILTPTTPIKL---VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQI---RFSPRGRI 202 I T L V++ Y +TN + + + G Sbjct: 180 IQTIGGDDFLLSQVWEIGAT-----------GYETDCSFQITNLARRPLVLNQLIMNGGD 228 Query: 203 MRHKPQTATNTFGVQEGFIAV-LGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWA 260 + + + + D S + K + + N W GIS+KY+ Sbjct: 229 LAAWAMISGDKMRTPSHRMDFETADGSFYDIKADKKDDADYFQNPAPMVDWAGISNKYFG 288 Query: 261 SVFIPSKETS-FHSQFKYLSDGHARY--QAKFSANEITILPGKSITTTNFLFAGAKEFPT 317 + + F + + Y + + G+S + ++G K Sbjct: 289 VILTAKEPFQLFQGRTMQMRGKDKVYIPTVGARLPAMMLNAGESKSVAFRYYSGPKMTQL 348 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + +E M + WG ++A+ + ++ + G++G++I++ T+ V+LLF+P Sbjct: 349 LEAFE---PSTNRMMHLAWGPLDYLARLLLWVLVQLHGFCGSYGVSIIILTLMVRLLFYP 405 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 + K S M+ +QPKI LREK+K +P Q+L M++LY+ +NP GC PILLQI Sbjct: 406 VTAKANASMRKMQAVQPKIAALREKYKDNP-QLLNSKMMELYREEKVNPFGGCLPILLQI 464 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 PVFFA+Y + ++++R + W KDLAAAD L+ + + ++M Sbjct: 465 PVFFALYATLDGAVQLRQVS-FLWAKDLAAADTVAKIPLYFYD-------LPINPLVLMM 516 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + M IQ +M+P D Q ++ MPVV + L P+GL +YW+ SN SI+Q + Sbjct: 517 TALMMIQQRMTPMAMDPMQKKMMLMMPVVMLIFLYDLPSGLTLYWTVSNFFSIIQLKLQQ 576 Query: 558 KMH 560 K H Sbjct: 577 KAH 579 >gi|326336217|ref|ZP_08202389.1| inner membrane protein OxaA [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691726|gb|EGD33693.1| inner membrane protein OxaA [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 616 Score = 257 bits (657), Expect = 3e-66, Method: Composition-based stats. Identities = 122/620 (19%), Positives = 240/620 (38%), Gaps = 69/620 (11%) Query: 1 MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 ME N + I + ++ + Y + + T Q DN A + Sbjct: 1 MEEKRTNIYSLIGMMLMFIILMYYMYNHQPTKPNTQTSTKETTQVQKTSTDNVPTATIPT 60 Query: 60 DRAQ------------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 D + + E++N L ++ KG Q +L ++ Sbjct: 61 DSLELSKYQEQLGAFGYSAVLPSAKEGSYTEIENELLKLKVSNKGGQIIELLVKNQKTYQ 120 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 V L+ +N ++ EL +T +N L + + + T +KL Sbjct: 121 GK---PVYLVKDNNA--SFSIEL---ATNDNRTLHTKDLYFEP---SLSGNTLSMKLKVS 169 Query: 162 NANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + + T L + YL ++ + + + + K + + Sbjct: 170 ATQYLEY--TYMLHPNEYLLD--FSIHSVGLSNV-------LNTGKVPVLSWNLTARRME 218 Query: 221 IAVLGDKSLVE--QKYSDIEKSSISNFHE------SNSWLGISDKYWASVFIPSKETSF- 271 +V + V+ +Y D +S E W+ ++S I K + Sbjct: 219 KSVTYEDRYVQAIVQYEDNRDDKLSAGGEDSEEFKQIHWIDFKQHLFSSFLITDKPFATG 278 Query: 272 ---HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + R FSA I+ + + G ++ + Y+K+ + Sbjct: 279 KLSSKNLANSEGENVRKTKDFSAVFPIAYNSGEISESLHFYYGPSDYHLLKKYDKEYELT 338 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + + + WG F +I K + + F + + G+AI++ T+ V++L P+ K Y+S A Sbjct: 339 K-AIPLGWGIFGWINKWFVIPVFDFLSKFMSMGLAIIVLTIIVRILLSPVQYKSYLSQAK 397 Query: 389 MKNIQPKIDELREKFKQSP-PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 MK ++P+I+E+ K+K Q+ + LY +NPL+GC P LLQ+PVFFA++ Sbjct: 398 MKVLRPEIEEINNKYKGQENAMKRQQETMALYSKAGVNPLSGCIPALLQMPVFFALFSFF 457 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + +R + W DL++ D +I L +PFY HV ++PI+ S+++ I M M Sbjct: 458 PTAFMLRQES-FLWANDLSSYD--SIAQLPFSIPFYG---NHVSLFPILASVTLLIYMLM 511 Query: 508 S-------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + ++ P++ +F +++ +GL +Y+ SN+I+I I Sbjct: 512 TAGQTQQPQQEGMPNMKFMMYISPLMMLFFFNNYASGLSLYYFISNLITIFIMLAIKYWI 571 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 + + +++ K Sbjct: 572 IDDKRIHAKIQENKQKPRKE 591 >gi|312129338|ref|YP_003996678.1| membrane protein insertase, yidc/oxa1 family [Leadbetterella byssophila DSM 17132] gi|311905884|gb|ADQ16325.1| membrane protein insertase, YidC/Oxa1 family [Leadbetterella byssophila DSM 17132] Length = 611 Score = 257 bits (657), Expect = 3e-66, Method: Composition-based stats. Identities = 120/604 (19%), Positives = 245/604 (40%), Gaps = 48/604 (7%) Query: 1 MERN--WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME NY + + L V++ A+ FY T P V+ I Sbjct: 1 MENKIDKNYIIGLLLMVLMFTAYSIFYTPSNPTTPEKTEVTSTTKTAPKAVN------PI 54 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS----SNSPIVTLLSPS 114 D A + + ++N + + + +G + L+ Y + + + S Sbjct: 55 LDSTTAAAPEKEIVVENKDIKVTFSSRGGVIKQVALKDYKTYADYIGGKDKAEMVIFDGS 114 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVW-NLISGKILTPTTPIKLVF-KNANNILFERTI 172 + LD+ L S + + P+ LVF ++T Sbjct: 115 KSN------LDFEIPTATGALKLSQVNFHTDAVNATVAEGQPLTLVFSTQIQGGTLQKTY 168 Query: 173 SLDEHYLFKIVDTVTNNSIDQI-RFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 +L++ F+I ++ ++ + R +P + Q N + E + E Sbjct: 169 TLNDKG-FEIQHGISTQGLEAVVRNAPIVLNWENHLQVLEND--LNENRKGSQINYFDKE 225 Query: 232 QKYSDIEKSSISNFHE----SNSWLGISDKYWASVFIPSKETSFHSQF--KYLSDGHARY 285 + + D+ +S SN +E W KY+ S + ++F + + + Sbjct: 226 ENFEDLGGNSTSNANEEAELPVKWFSFHQKYFTSGIVFENSFFQKAKFNMETPTADESVV 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + EI T+ + G E + D + + + I + Sbjct: 286 KIGTATAEIAYADFIGNKTSFKYYFGPNELKELKAVGYDFQK---NLYLGYDIVKPINRY 342 Query: 346 MF-MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F L ++ + V N+G+ I++ + +KL+ PL K Y+S+A M+ + P+I+ ++EK Sbjct: 343 IFVPLFTWVESFVSNYGLLIIVVVLIIKLVLTPLIYKSYMSSAKMRVLAPEINAIKEKVG 402 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 P + LQ+ ++LY+ +NPL+GC P+LLQ+P+ +++ + + R + W KD Sbjct: 403 DDPVK-LQQETMKLYQQVGVNPLSGCIPLLLQMPILMSVFFLFPNLVMFRQ-KEFLWAKD 460 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS----MFIQMKMSPPPADKG-QAMI 519 L+ D N+ + +P H+ ++ ++M++S + + +P I Sbjct: 461 LSTYD--NLISWGFNMPILG---NHLSLFVVLMTISSLAFTYYNNQNTPDQPGPVDMKKI 515 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE--IGLIDRLRSTFSKN 577 PVVF+F L+SFPA L Y+ SN+++I QQ ++ + E + +++ + + Sbjct: 516 SYIFPVVFMFVLNSFPAALSFYYLVSNLVTIAQQLIVKRFVNEEKILSILENNKRNYHSK 575 Query: 578 YNSQ 581 + Sbjct: 576 PQKK 579 >gi|299135904|ref|ZP_07029088.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX8] gi|298602028|gb|EFI58182.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX8] Length = 601 Score = 257 bits (657), Expect = 3e-66, Method: Composition-based stats. Identities = 112/587 (19%), Positives = 228/587 (38%), Gaps = 64/587 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNF---YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 + N ++ V + + +++ Q + + P E+ ++ AA Sbjct: 15 QDNRSFMVMLLVMFGVIFGLQYWRAKHTPPPPEKSPAITQSATPQSSAPAAGTPTAASSA 74 Query: 59 DDRAQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A + + +N + + +GAQ L+G++ P+ +L + + Sbjct: 75 SSVATVQGTAESTTVVENELYRITFSNRGAQVTSWVLKGFNDTTGH--PLNLVLDDAAKQ 132 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK-NANNILFERTISLDE 176 Y L +L + V + + P L F A N+ +T S Sbjct: 133 FGYPLSLYTYDAGLTQQLKQALYVPSATG----SLQAPASLSFDYAAGNVTVHKTFSFGA 188 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y+ DTV I + P + + + + ++ D Sbjct: 189 DYVIH-ADTVVLRDGAPISA------LLAWPAALGDMENQLAYGYGQIDTSTNGKDEHLD 241 Query: 237 IEKSSI-SNFHESNSWLGISDKYWASVFIPSKETS--FHSQFKYLSDGHARYQAKFSANE 293 I+ +S + + + G+SD+Y+A+VF+P + + + FS Sbjct: 242 IKHTSGGATLKQPFDFAGVSDQYFAAVFMPDQPQDAMLVTLHNQIDVNKMSRMPGFSKGT 301 Query: 294 ITIL------PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + S LF G K + + E L+D+G++ + K +F Sbjct: 302 AQVPVLGTAVGNVSGHNQTRLFVGPKSIKVLKSV-RTANNNTLETLLDFGFWGPVGKVLF 360 Query: 348 MLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + ++ + ++G AI+ T+ + L+ PL + S M+ IQP+ID Sbjct: 361 LGLQAVHSALPHALDAVHDYSWGWAIIFFTILINLILLPLRVQGMRSMLKMQRIQPQIDA 420 Query: 399 LREKFK-----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 ++ K+K + +++ K + ++ GC P L+Q+P+ FA + +++ +E+ Sbjct: 421 IKAKYKNPKATDPKMAEMNAEIMKTQKDNGVSMFGGCVPSLIQLPLLFAFFTMMTRVVEL 480 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512 R W W+ DL+ ADP +I PI+M ++ F+ +P P Sbjct: 481 RQ-SHWYWLHDLSLADPHHIL-------------------PILMVITSFLAQYYTPSPGV 520 Query: 513 DKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q ++ MP+ + + +GL +YW+ SN++ I+QQ V+ + Sbjct: 521 DPQQQKMMAFMMPLFSGYMTWQYASGLALYWNISNIVMIIQQQVMNR 567 >gi|288800073|ref|ZP_06405532.1| inner membrane protein OxaA [Prevotella sp. oral taxon 299 str. F0039] gi|288333321|gb|EFC71800.1| inner membrane protein OxaA [Prevotella sp. oral taxon 299 str. F0039] Length = 632 Score = 256 bits (655), Expect = 6e-66, Method: Composition-based stats. Identities = 119/616 (19%), Positives = 251/616 (40%), Gaps = 54/616 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK----NIQTVKQPNQVDNSYAAV 56 M+ N + +L ++ + + E R+ N++ ++ N + A Sbjct: 1 MD--KNNIIGFSLIAAVLIGFSVWNQPSSEERAEIARQDSIANVKKAQEKNLSSKTLLAN 58 Query: 57 LIDDRA------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 D + + V LK+ L ++N KGA ++ ++G+ + Sbjct: 59 TATDSSLTNADTTSVLFNALKGTAQDVTLKSEKLTLTLNSKGAVVREVLIKGFKDRNGN- 117 Query: 105 SPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 P VTL + ++ Y + + + T P++ T + L T + + ++ Sbjct: 118 -PNVTLFNSNDQNLRYILSTKEENIDTKELYFQPSNVTDSTVTFTAQLQGTKKLVINYQL 176 Query: 163 ANNILFERTISLDEHYLFKI--VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 +N L +I +++ D+ R +G ++ T T + +G Sbjct: 177 KHNYLLHTSIQAQGMNAIFAPNTNSMDIVWQDKCRQQEKGFTFENRYSTLT--YHKADGG 234 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-S 279 L + S E+ IE W+ ++++++V I + ++ + Sbjct: 235 TDYLSESS--EKVDEKIEDK--------LDWVAFKNQFFSAVMIAKDDFQSNTLLTSVPQ 284 Query: 280 DGHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM----LI 334 + + Y + A T P T + G +F + + E +++ ++ L+ Sbjct: 285 EKGSGYLKDYEAKLKTFFDPTGKKPTEFEFYYGPNDFRLLQNIEDNVSFIGKDLQMQRLV 344 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 GW F + + F L N GI ++L T+ +K L +PL KK Y+S+A M+ Sbjct: 345 YLGWPLFRIINRWFTIYVFDFLTSMNMNMGIVLILITLLLKFLTYPLVKKSYMSSAKMRV 404 Query: 392 IQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++P+++E + + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + + Sbjct: 405 LKPRLEEATKHLNGADNQMQKQQAMMSEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNA 464 Query: 451 LEMRHAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-Q 504 +++R + WI DL+ DP N + + L F + M++ Q Sbjct: 465 IQLRGES-FLWISDLSTYDPILEWHNNYWLIGDHLSLTCILFCAANLLYSWMTMKQQKDQ 523 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M K ++ MP++F F + + AGL Y+ S S + ++ K E Sbjct: 524 MIGQQADQMKMMQYMMFVMPLMFFFMFNDYSAGLNFYYFMSLFFSALIMWILRKTTDDE- 582 Query: 565 GLIDRLRSTFSKNYNS 580 L+ L + +N ++ Sbjct: 583 KLLSILDKKYKENKDN 598 >gi|325954218|ref|YP_004237878.1| membrane protein oxaA [Weeksella virosa DSM 16922] gi|323436836|gb|ADX67300.1| Membrane protein oxaA [Weeksella virosa DSM 16922] Length = 619 Score = 256 bits (654), Expect = 8e-66, Method: Composition-based stats. Identities = 132/610 (21%), Positives = 246/610 (40%), Gaps = 51/610 (8%) Query: 1 MERNWNY----FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI---QTVKQPNQVDNSY 53 M++ N+ + L + I++ + P EE+ +++ + + ++ Sbjct: 1 MQKERNFDFNQLIGFVL-IAILFGVYFWMTKPSEEELARQKQELLAKEATEKNKGTQKDI 59 Query: 54 AAVLIDDRA-QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS----NSPIV 108 A D A Q + V +N + +N +G Q + L+ HL S ++ + Sbjct: 60 AQFPTDSLATQQVVKEENVTFENEHVKIQVNGRGGQIGLVQLKE-HLAFDSLKGVDAQPL 118 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L+ N++ + T N EL S S K+LT T I L Sbjct: 119 YLVKDGNSQFNLSFKDINGKTINTKELIFSPKQEQKGSTKVLTMTAQI------GAGQL- 171 Query: 169 ERTISLDEHYLFKIV------DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 S D+ Y VT++ + ++ + + F Sbjct: 172 HYIYSFDDKYGLDFQIRSQGLHRVTHDKNIALNWNLDAFSLEKGKDQEH--YWSHTYF-K 228 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD-G 281 + G S+ + + + ES W+ +++AS+ + + G Sbjct: 229 LSGKNSVEYELFGADKWEE----KESIDWIAFKQQFFASILSFDGGLKNTNGGSINYEIG 284 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 ++Y F+ + + I +F + Y FE ++ +GW + Sbjct: 285 KSKYNKGFNFSAPIEIKSGEINQHLSWDFVPLDFNNLKKYNDK----GFEKIVSYGWGFL 340 Query: 342 IAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + + F +L + +G AI L T+ VKL+ P+ KQY +A MK ++P+++EL Sbjct: 341 GWLNKYFFLFIFQSLAKIVPYGWAIFLMTIVVKLVLSPIMYKQYRQSAMMKVLRPELNEL 400 Query: 400 REKFKQ-SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 EKFK Q+A +++Y+ +NPLAGC P LLQIP+F+A+++ +++R PF Sbjct: 401 NEKFKDPKDAMKKQQATMEIYRKAGVNPLAGCLPALLQIPIFYALFRFFPNVIDLRGEPF 460 Query: 459 WGWIKDLAAAD-----PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM--FIQM-KMSPP 510 W +DL A D P +I L G L + ++ + +S SM F M + Sbjct: 461 WF-AEDLTAFDSVIQIPASIPFLNGHLSIFALLYIVAMMVYFKVSGSMDNFNNMPQQEGM 519 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P + ++ MP+ F L+++ +GL Y+ SNVI+I I + E + + Sbjct: 520 PNMQFMKYMMYIMPIFFFVFLNNYASGLSWYYLVSNVINIFIVLYIKNVMIKEDKIHAMI 579 Query: 571 RSTFSKNYNS 580 + +K + Sbjct: 580 QENKAKPMKT 589 >gi|258649215|ref|ZP_05736684.1| inner membrane protein OxaA [Prevotella tannerae ATCC 51259] gi|260850480|gb|EEX70349.1| inner membrane protein OxaA [Prevotella tannerae ATCC 51259] Length = 626 Score = 256 bits (654), Expect = 8e-66, Method: Composition-based stats. Identities = 115/610 (18%), Positives = 232/610 (38%), Gaps = 49/610 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPR----IEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N + L +++ + + + E + + Sbjct: 1 MD--KNTLTGLFLIALLLIGFSYYTTTQTEETQVAEQTAQPAAKPATDSTKVSTTANKQQ 58 Query: 57 LIDDRAQALSMSPR-----VELKNPSLIGSINLKGAQFDDLNL---RGYHLDVSSNSPIV 108 I D + S + LKN + +I+ KG ++ L + Y ++ + Sbjct: 59 HIADSTDIFNGSREGENTPISLKNEHVAVTISPKGGAISNVRLCEFKSYSDFQNNKEAQL 118 Query: 109 TLLSPSNTKNAYFAEL--DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 +L+ K + E ST + P + T L + + + +K Sbjct: 119 SLIEEKTHKLNFRFETIEGLYSTEDYYFQPLAKTDSTLTMALGSSKGDTLYIDYKLIKGS 178 Query: 167 LFE-RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 F TI + + ++IR +G N + G Sbjct: 179 YFVNTTIRIKGRSFAGKTLGID--WKNKIRQQEKGFYF-------ENLYSTLTYKKENEG 229 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHAR 284 L EQK +++ + W+ D+Y+++V I K + ++ K + + Sbjct: 230 TDKLSEQKSDELK------PEGNIDWIAFKDQYFSAVLIAGKNSFTNTFLKSDTCSEGSG 283 Query: 285 YQAKFSA-NEITILPGKSITTTNFLFAGAKEF---PTIHHYEKDLAIPRFEMLIDWGWFY 340 Y + A E+ P T + G ++ + Y+ + L+ GW Sbjct: 284 YVKDYIATAEVAFDPTGKNVTQVQFYFGPNKYLYLKGLEKYKLGNKDLDLQDLVYLGWPL 343 Query: 341 FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F F + F L G N GI ++L T+ ++ + +P KK ++STA M+ ++PK+D Sbjct: 344 FRWINRFFTIYVFDFLSGFGLNMGIVLLLITLLMRAIVYPATKKSFLSTAKMRVLRPKVD 403 Query: 398 ELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 EL +K+ Q+ +QLY + ++P+ GC P+ +Q+P++ A++ + + E+R Sbjct: 404 ELAKKYPNKEDAMKRQQETMQLYSQYGVSPMGGCLPMFIQMPIWIAMFNFVPNAFELRQ- 462 Query: 457 PFWGWIKDLAAADPTNIF-TLFGILPFYLPGFMHVGIWP-IIMSLSMFIQMKMSPPPADK 514 + W DL+ D + T + +L F + ++ S Q + S Sbjct: 463 QAFLWADDLSTYDDIISWNTPIWGIGTHLSLFCVLFCCTNLLYSWLTMKQQQDSMSGEQA 522 Query: 515 GQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 Q I+ W MP+ F F + + +GL Y+ S + S + + + + L+++L Sbjct: 523 QQMKIMQWMTFLMPIFFFFMFNKYSSGLNYYYFVSLLTSALTMWYLRRSTDDK-KLLEKL 581 Query: 571 RSTFSKNYNS 580 + F N ++ Sbjct: 582 EANFRANKDN 591 >gi|251772740|gb|EES53302.1| putative inner-membrane protein [Leptospirillum ferrodiazotrophum] Length = 399 Score = 255 bits (652), Expect = 1e-65, Method: Composition-based stats. Identities = 110/350 (31%), Positives = 170/350 (48%), Gaps = 49/350 (14%) Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 +G I D + E K DI + S +W+G KY+ Sbjct: 82 FQGPIYGTPDGKMNEFK-KDISE---VFPPTSLTWVGNETKYFI------------GYIS 125 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 + K N L + + L K + + A P +D+ Sbjct: 126 LKGFPASTEIIKDKTNSFIRLSFNNAHASLTLTGEPKRYSLLKS-----AEPGLLDTVDF 180 Query: 337 GWF--------YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 GWF F+AK +F+ +S Y + N+G AI+ T+ +K+LF PLA + S Sbjct: 181 GWFLFGRITLVSFLAKFLFVFLSTLYTHMQNYGFAIIFVTLLIKILFSPLAYMSFRSMNQ 240 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP+I +L+ K+K Q L AM++LYK INPL GC P+++QIPVF A+Y +++ Sbjct: 241 MQQLQPEIKKLQAKYKDDKAQ-LNAAMMELYKERRINPLGGCLPVIVQIPVFVALYNILN 299 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 ++E+R APF WI DL+ DP IF PIIM ++M IQ K++ Sbjct: 300 NTVELRQAPFLLWIHDLSIKDPYYIF-------------------PIIMGITMVIQTKLT 340 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P D Q I+ ++PVV F +FP+GL++YW +N+++I QQ V+M+ Sbjct: 341 PSTPDPMQRRIMLFLPVVMTFFFLNFPSGLVLYWIVNNLLTIGQQYVLMR 390 >gi|119953231|ref|YP_945440.1| putative inner membrane protein translocase component YidC [Borrelia turicatae 91E135] gi|254772754|sp|A1QZM8|OXAA_BORT9 RecName: Full=Inner membrane protein oxaA gi|119862002|gb|AAX17770.1| 60 kDa inner membrane protein YidC [Borrelia turicatae 91E135] Length = 545 Score = 255 bits (652), Expect = 1e-65, Method: Composition-based stats. Identities = 129/575 (22%), Positives = 247/575 (42%), Gaps = 57/575 (9%) Query: 1 MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M ++ AI LS+ + + F+ M E D + ++ Sbjct: 1 MSQSKRILRAIYLSLFFIGIFMLVDDVFFSRKSPSVMEREI----GFNLDRDFDVEHHSI 56 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 +D + S + ++ + + G L L+ HL++ N P + + Sbjct: 57 DENDTLSLSANSKEIGVETGIYYATFSTFGGNLVSLKLKD-HLNLERN-PTEMVKVNMDR 114 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-- 174 + ++ D ++ ++++ T K + N + + + Sbjct: 115 EGLFYITFDNLT----------KSLFSYDKINDYTHEFKTKFEY-NDKYYEYIKRYTFSS 163 Query: 175 DEHYLFKIVDTVTN-NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 + YL K+ + N ++ D ++ + + +Q + + Sbjct: 164 KDEYLIKLEIFLNNVDANDNFDIDFYKFVLSSDIENLSERGKLQYNNYLSQSIYYDTKLR 223 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 Y K +S W+G S KY+ + + + + +FK + F N+ Sbjct: 224 YG---KDGLSVIKPK--WVGSSTKYFEVLV---SKENMNVEFKQ----ENKVLKTFVLNK 271 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKD------LAIPRFEMLIDWGWFYFIAKPMF 347 I S + T +++AG ++ + + ++ L+ F M ++ YFI PM Sbjct: 272 I---GDTSFSDTFYIYAGPRDNGYLDIFNENNLNSFGLSNVEFGMSVEKSLLYFIQVPMQ 328 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++M FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ E++ KFK P Sbjct: 329 LIMQIFYDVIPNWGLSIIFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKNDP 388 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLA 466 + L + M +LY+ +NPL GC PILLQ+PVFFA+Y +++ +R A F GWI DL+ Sbjct: 389 -KRLNEEMGKLYREEGVNPLGGCLPILLQLPVFFALYGLVNNFFLLRGASFIPGWIDDLS 447 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK----GQAMILNW 522 D F + + + + I P IM ++ + +S + K Q + Sbjct: 448 IGDSIYYFG------YKVFVWTDIRILPFIMMITQLLSTIISSNVSFKNLGSQQKFLYFG 501 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 MP++F F L P+GL+IYW +N+ +I+QQ I Sbjct: 502 MPIMFFFILYDMPSGLLIYWITTNIFTILQQYYIK 536 >gi|203287885|ref|YP_002222900.1| 60 kDa inner-membrane protein [Borrelia recurrentis A1] gi|254772753|sp|B5RRP5|OXAA_BORRA RecName: Full=Inner membrane protein oxaA gi|201085105|gb|ACH94679.1| 60 kDa inner-membrane protein [Borrelia recurrentis A1] Length = 545 Score = 255 bits (652), Expect = 1e-65, Method: Composition-based stats. Identities = 137/587 (23%), Positives = 249/587 (42%), Gaps = 70/587 (11%) Query: 1 MERNWNYFVAIALSVI---IVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M N A+ LS+ I +F + NE D + + Sbjct: 1 MSPNKRILRAVYLSLFFIGIFMLLDDFLFSRKASSFMNEEIKF---DLNKDFDIDNSLID 57 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 D S + + + G L L+ HL++ + + P N Sbjct: 58 EDFTFNLSDNSEDINVDTDIYHATFATFGGNLISLKLKN-HLNLDKKPTEIVKVHPQNQS 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y +L S ++ I + T +++ N + + + + Sbjct: 117 LFYITL---------DKLSKSLFLYEQIDSHVHDFKTNVEV---NGKYYEYIKRYTFSKS 164 Query: 178 --YLFKIVDTVTN-NSIDQIRFSPRGRIMRHKPQTAT-------NTFGVQEGFIAVLGDK 227 YL K+ + N + D I ++ + + N + A+ D Sbjct: 165 NEYLIKLEIFLNNIDVNDDIGIDFYKFVLNSGIEELSAKGKLQYNNYLSH----AIYYDT 220 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 L K + +I+N W+G KY+ + + + +FK+ + Sbjct: 221 KLRYGK----DGLNIANPK----WVGAGTKYFEVLV---SKENMKVEFKH----ENKVLN 265 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYF 341 F N+ L K+++ +++AG ++ + + + L+ F M ++ YF Sbjct: 266 AFILNK---LDNKNVSDVFYIYAGPRDNKYLDIFNQRELNSFGLSNVEFGMSVEKSLLYF 322 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + PM ++M FYN++ N+G++IM T+ V++L FPL K + +TA + +QPK+ E++ Sbjct: 323 LQVPMQLIMQIFYNVIPNWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQV 382 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-G 460 KFK P + L + M +LY+ +NP+ GC+PILLQ+PVFFA+Y +++ +R A F G Sbjct: 383 KFKSDP-KRLNEEMGKLYREEGVNPIGGCFPILLQLPVFFALYGLVNNFFVLRGASFIPG 441 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK----GQ 516 WI DL+ D F + + + + I P IM ++ + +S + K Q Sbjct: 442 WIDDLSIGDSIYYFG------YKVFAWTDIRILPFIMMITQLLSTIVSSNVSFKSLGSQQ 495 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + MP++F F L P+GL+IYW +N+ +I+QQ I KM+ +E Sbjct: 496 KFLYFGMPIMFFFILYDMPSGLLIYWITTNIFTILQQYYI-KMNLSE 541 >gi|203284351|ref|YP_002222091.1| 60kDa inner-membrane protein [Borrelia duttonii Ly] gi|254772750|sp|B5RLZ9|OXAA_BORDL RecName: Full=Inner membrane protein oxaA gi|201083794|gb|ACH93385.1| 60kDa inner-membrane protein [Borrelia duttonii Ly] Length = 545 Score = 255 bits (652), Expect = 1e-65, Method: Composition-based stats. Identities = 137/587 (23%), Positives = 249/587 (42%), Gaps = 70/587 (11%) Query: 1 MERNWNYFVAIALSVI---IVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M N A+ LS+ I +F + NE D + + Sbjct: 1 MSPNKRILRAVYLSLFFIGIFMLLDDFLFSRKASSFMNEEIKF---DLNKDFDIDNSLID 57 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 D S + + + G L L+ HL++ + + P N Sbjct: 58 EDFTFNLSDNSEDINVDTDIYHATFATFGGNLISLKLKN-HLNLDKKPTEIVKMHPQNQS 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y +L S ++ I + T +++ N + + + + Sbjct: 117 LFYITL---------DKLSKSLFLYEQIDSHVHDFKTNVEV---NGKYYEYIKRYTFSKS 164 Query: 178 --YLFKIVDTVTN-NSIDQIRFSPRGRIMRHKPQTAT-------NTFGVQEGFIAVLGDK 227 YL K+ + N + D I ++ + + N + A+ D Sbjct: 165 NEYLIKLEIFLNNIDVNDDIGIDFYKFVLNSGIEELSAKGKLQYNNYLSH----AIYYDT 220 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 L K + +I+N W+G KY+ + + + +FK+ + Sbjct: 221 KLRYGK----DGLNIANPK----WVGAGTKYFEVLV---SKENMKVEFKH----ENKVLN 265 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYF 341 F N+ L K+++ +++AG ++ + + + L+ F M ++ YF Sbjct: 266 AFILNK---LDNKNVSDVFYIYAGPRDNKYLDIFNQRELNSFGLSNVEFGMSVEKSLLYF 322 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + PM ++M FYN++ N+G++IM T+ V++L FPL K + +TA + +QPK+ E++ Sbjct: 323 LQVPMQLIMQIFYNVIPNWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQV 382 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-G 460 KFK P + L + M +LY+ +NP+ GC+PILLQ+PVFFA+Y +++ +R A F G Sbjct: 383 KFKSDP-KRLNEEMSKLYREEGVNPIGGCFPILLQLPVFFALYGLVNNFFVLRGASFIPG 441 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK----GQ 516 WI DL+ D F + + + + I P IM ++ + +S + K Q Sbjct: 442 WIDDLSIGDSIYYFG------YKVFAWTDIRILPFIMMITQLLSTIVSSNVSFKSLGAQQ 495 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + MP++F F L P+GL+IYW +N+ +I+QQ I KM+ +E Sbjct: 496 KFLYFGMPIMFFFILYDMPSGLLIYWITTNIFTILQQYYI-KMNLSE 541 >gi|332827257|gb|EGK00027.1| hypothetical protein HMPREF9455_03616 [Dysgonomonas gadei ATCC BAA-286] Length = 646 Score = 254 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 123/643 (19%), Positives = 252/643 (39%), Gaps = 91/643 (14%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN--------IQTVK-------- 44 M+ N + L ++ + P EE+ +++ QT + Sbjct: 1 MD--KNTIIGFVLIAAVIIGF-TLLSRPSAEELAKQKEQYRRDSIEYAQTKEREKELNNL 57 Query: 45 ------------------QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKG 86 P Q +S AV+ + + + L+N L + KG Sbjct: 58 KDTAAEVKNENPVDDFFAAPVQEADSVLAVMDSVQMGSQQAEQLITLENSKLKVVFSTKG 117 Query: 87 AQFDDLNLRGY-HLDVSSNSPIVTLLSPSNTKNAYFAELDY-VSTANNIELPNSNTVWNL 144 + L+ Y D S + L + AE ++ N L +N ++ Sbjct: 118 GKMVSAQLKEYSRYDGDS----LYLFNND-------AEFSLQLTNKQNKVLHTNNLIFTP 166 Query: 145 ISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN-------NSIDQIRFS 197 I + + ++ + ++ F ++ ++ Y+ K + N D I Sbjct: 167 IKAEG-DNSLIMRFSYAANQHVDFIYKLA-EDDYMLKYDVNLVGLQPMLDRNKSDVIELY 224 Query: 198 PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257 ++ R + + + GD + +KS E W+ ++ Sbjct: 225 WAQKMRRQEKSVKNEQRYSHIYYKYIGGDVKELSS-----DKSEQLEVKEPAKWIAFKNQ 279 Query: 258 YWASVFIPSK--ETSFHSQFKYLSDGHARY----QAKFSANEITILPGKSITTTNFLFAG 311 ++A + I + ET+ ++D ++ Y +A A + +I+ + G Sbjct: 280 FFAPILIADEKIETALLDSKVLVTDENSEYLKTVEATIYAPATVDMNAGTISAGFTYYLG 339 Query: 312 AKEFPTIHHYEKDLAIPR----FEMLIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAI 364 F + Y+ + + L+ GW F + ++ F L G + GI I Sbjct: 340 PMSFTLLKGYDSHIDDVNKQLDLDKLVPLGWTLFRWVNQYFVIPIFNLLRGTGMSMGIVI 399 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHN 423 +L T+ VKL+ PL K ++S+A M+ ++P+++EL K+ KQ Q+A + LY Sbjct: 400 LLLTIIVKLVISPLTFKSFMSSAKMRVLRPQVEELAAKYPKQEQAMEKQQATMALYNKAG 459 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP++GC P+LLQ+P+ A++ ++E+R + W DL+ D I +P Sbjct: 460 VNPMSGCIPLLLQMPILIALFSFFPNAIELRGQS-FLWATDLSTYD--AIIEWKNHIPLI 516 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSP------PPADKGQAMILNWMPVVFVFALSSFPAG 537 H+ ++ I+M+++ I K + G ++ MP++F+F L+ +P+G Sbjct: 517 GT---HISLFCILMTVTNIIYTKFNMEMTNTGQQQMPGMKWMMYLMPLIFLFMLNDYPSG 573 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 L Y+ S +++I+ + + E ++ +L + +K Sbjct: 574 LTYYYFLSLLVTILLT-IGFRYIIDEDKVLAKLEANKAKPKKK 615 >gi|120436565|ref|YP_862251.1| putative inner membrane protein translocase component YidC [Gramella forsetii KT0803] gi|117578715|emb|CAL67184.1| inner membrane protein OxaA [Gramella forsetii KT0803] Length = 616 Score = 254 bits (649), Expect = 3e-65, Method: Composition-based stats. Identities = 108/574 (18%), Positives = 228/574 (39%), Gaps = 61/574 (10%) Query: 29 RIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA--------LSMSPRVELKNPSLIG 80 ++E+ + + +Q ++S + R A + + N L Sbjct: 43 QVEQEPRDNQVTTNNSNTSQTNDSTSLADAQRRLGAFGYSETLTSAQGGSTTISNDLLEL 102 Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 I+ KG ++ L+ + S PI + + + N F +T + L N Sbjct: 103 KISNKGGYIEEARLKNFK-TYDS-IPIYLIKDGNASLNMSF------TTTDGRTLNTENL 154 Query: 141 VWNLISGKILTPT-TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN-----NSIDQI 194 + + +KL + + + Y+ NS + Sbjct: 155 YFEPELTESNGNQILSMKLKVSEDEYLEYRYAMR-PGEYMLDFSVRSEGLTGVLNSAETP 213 Query: 195 RFSPRGRIMRHKPQTA-TNTFG--VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251 + + RH + N + + E S E DI S+ Sbjct: 214 TLDWKLKGYRHAKSISYENRYTDLIYEYDGGDDDSVSDGEDDDEDI------------SY 261 Query: 252 LGISDKYWASVFIPSKETSFHS----QFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 + +++S+ + S + + F++ L + Sbjct: 262 IAYRQHFFSSILLTDNPFKTSSFKVENLVEDEEVDTVFTKTFASTIPLELKAGELNYNMN 321 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF-MLMSYFYNLVGNFGIAIML 366 + G ++ ++ Y+++L + + WG F +I K +F ++ + ++GIAI+ Sbjct: 322 WYYGPSDYKILNDYDRNLDEI---VPLGWGIFGWINKYIFIPFFAFLAGFLPSYGIAIIA 378 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 T+ V+++ P+ K Y+S A MK ++P+I+EL EK+K + + Q+ ++LY +P Sbjct: 379 MTIVVRIVLSPVTYKSYLSQAKMKILKPEINELNEKYKDNAMKK-QQETMKLYSKAGASP 437 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 ++GC P L+QIPVF+A+++ + ++R + W DL++ D + L + FY Sbjct: 438 MSGCLPALMQIPVFYALFQFFPSAFQLRQKS-FLWADDLSSYD--VVAELPFHIWFYGD- 493 Query: 487 FMHVGIWPIIMSLSMFIQMKM--------SPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 HV ++PI+ S+++F+ M M + P ++ P+ + +++ +GL Sbjct: 494 --HVSLFPILASIAIFVYMMMTTGQSMQANQQPGMPNMKFLMYLSPLAMLVFFNNYASGL 551 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 +Y+ SN+I+I VI E + +++ Sbjct: 552 SLYYFTSNLITIGIMLVIKYAIIDEDKIHAKIQE 585 >gi|257457349|ref|ZP_05622520.1| inner membrane protein OxaA [Treponema vincentii ATCC 35580] gi|257445271|gb|EEV20343.1| inner membrane protein OxaA [Treponema vincentii ATCC 35580] Length = 521 Score = 254 bits (649), Expect = 3e-65, Method: Composition-based stats. Identities = 125/538 (23%), Positives = 237/538 (44%), Gaps = 52/538 (9%) Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 +++ + + V +K ++ +G L ++ + V ++ Sbjct: 1 MLETPDETVIGEQAVTVKTDIAEITLTNRGGDIISYKLLEHNNSKGDS--YVEMVKNLTD 58 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI----KLVFKNANN----ILF 168 +N F+ + P N +N+ + + + + KN + Sbjct: 59 RNRAFS-----IALGGAQAPALNQFFNVKE-ETVNGKHVVGFFKTISIKNQDGSVSSFTL 112 Query: 169 ERTISL-DEHYLFKIVDTVTNNSI-DQIRFSPRGRIMRHKPQTATN------TFGVQEGF 220 + + + Y+F++ T++ ++ + F G +R PQ + + + F Sbjct: 113 AKRYTFLPDDYMFELAVTISGDADMQGLNFDNAGYTLRTMPQIGPDWNAKADRYEYRNFF 172 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP--SKETSFHSQFKYL 278 + G ++K S ++ + +S W GIS KY++ + IP + +S + Sbjct: 173 AYING-----KKKDSALKANQTKVITDSVPWAGISGKYFSLIVIPSVPAQQILYSAAQPN 227 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE----KDLAIPRF---E 331 +D Q FS IT G +T ++ G + Y + Sbjct: 228 ADTVQDSQLFFSRPVIT---GNRVTDVYRIYLGPCSENILSTYNIPSKNNYNYDNLRIDT 284 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + + G + + + L+ +FY L+ N+G++I+L T+ +K++FFPL KK ST M+ Sbjct: 285 VAVSSGIWRPLEVLLKWLLQFFYKLIPNWGVSIILVTILIKVIFFPLTKKSSESTQQMQK 344 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QPKI EL+ K+K PQ L + M +LYK NPL+GC P+L+Q+P+ FA+Y++ + Sbjct: 345 MQPKIQELQAKYKG-KPQKLNEEMAKLYKEAGYNPLSGCLPLLIQLPILFAMYRLFNNYF 403 Query: 452 EMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-----QM 505 E R A F WI DL+ D +I +PF G+ + I PI+ +S + Q Sbjct: 404 EFRGAMFIPHWIPDLSVGD--SILQFPSPIPFL--GWTDLRILPIVYVISQMVFGKITQT 459 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 S + +++ MP+ F F + P+GL++YW+ +N + +VQQ +I M + Sbjct: 460 PTSDQQQNNTMKIMMYGMPLFFFFMFYNAPSGLLLYWTCTNFLMLVQQMIIKAMMKKK 517 >gi|24212878|ref|NP_710359.1| preprotein translocase subunit YidC [Leptospira interrogans serovar Lai str. 56601] gi|38502900|sp|P97041|OXAA_LEPIN RecName: Full=Inner membrane protein oxaA gi|24193541|gb|AAN47377.1| preprotein translocase subunit YidC [Leptospira interrogans serovar Lai str. 56601] Length = 627 Score = 254 bits (649), Expect = 3e-65, Method: Composition-based stats. Identities = 112/628 (17%), Positives = 244/628 (38%), Gaps = 84/628 (13%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--SYAAVLID 59 +R F+A+ LS+ I F+ + N E K Q+ K + Sbjct: 3 DRQTRLFLALILSMGIWMGVNYFFFPNTSTKKNTETKQTQSDKTSENTKQQITSGKTKES 62 Query: 60 DRAQALSMSPRVE--------LKNPSLIGSINLKGAQFDDLNLRGYH------LDVSSNS 105 + A + ++ + S I + G + ++ + + V+ + Sbjct: 63 NSADPVVQKEKITPFDTKKSFIVTDSYIVEFSSLGGKISKFYMKDFTGPNGELIQVARKN 122 Query: 106 PIVTLLSPSNTKNAYFAE---LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 P ++ + + + D+ + + +E+ +S + S I + Sbjct: 123 PETVVVDGKSYQAVELSRDKGFDFNFSDSLVEISDSPWNYIQFSLTEDKINHSISFSAVS 182 Query: 163 AN-NILFERTISL--DEHYLFKIVDTVTNNSIDQIRFSP-----RGRIM---------RH 205 + + ++ E+Y FK+ ++ N S +++ F+ R R Sbjct: 183 PDRSYQLKKEFRFYPSENY-FKLSISIINFSKEKLSFASQKNVRYLRTFGSLGPYPKDRP 241 Query: 206 KPQTATNTFGVQEGFIAVLGD--------------------KSLVEQKYS-DIEKSSISN 244 T F D S ++ +S +K S + Sbjct: 242 LSDRDTANFFRFYYLGGSFQDTLDGSSSVGFWSSVGNFFTGNSGTDESFSIKTDKESGVD 301 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 F + S +Y+ +V P + + + I + PG++ Sbjct: 302 FAGTGS------RYFIAVADPLDHKPHGIVLDNRPKNESGAVLVY--DNILLNPGENYNL 353 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPR------------FEMLIDWGWFYFIAKPMFMLMSY 352 + G +E + +L + + G + ++ Sbjct: 354 DFASYIGIRESEGMAFKNPELDPSQSKNSPFVGLSSDLNKSFNQGITTPFRNGIIWILKQ 413 Query: 353 FYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 Y + N+G +I++ + KL+F+PL +KQ S M+ + P++ + EKF P ++ Sbjct: 414 IYRFTIPNYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDP-KMR 472 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ ++LYK +N+NP+ GC P+++QIP+F A+Y S ++++ ++P + W+KDL+ D Sbjct: 473 QQKTMELYKKNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSP-FLWVKDLSEPD-- 529 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 + +P++ + + + ++M + Q +M+ D Q M++ MPV+ ++ Sbjct: 530 -VIWTSPAIPYFTQTGIGLNLLALLMVGTQVFQTRMTSVSMDPNQKMLMYVMPVMMLYIF 588 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + P+G+ +YW++ NV+SI QQ + + Sbjct: 589 WNMPSGVTLYWTFQNVLSIGQQWITNHL 616 >gi|256819005|ref|YP_003140284.1| putative inner membrane protein translocase component YidC [Capnocytophaga ochracea DSM 7271] gi|256580588|gb|ACU91723.1| 60 kDa inner membrane insertion protein [Capnocytophaga ochracea DSM 7271] Length = 621 Score = 254 bits (649), Expect = 3e-65, Method: Composition-based stats. Identities = 123/616 (19%), Positives = 237/616 (38%), Gaps = 69/616 (11%) Query: 1 MERNWN---YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------TVKQPNQVDN 51 ME + L I++ W P EE+ + + T Q + Sbjct: 1 MEEKKFDLKSIIGFTLIFILLM-WFMNNNKPSEEELAKRKAQQEQQANQATNTQKDTHTA 59 Query: 52 SYAAVLIDD---------------RAQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLR 95 ++ + D A S V + +N + +I+ +G Q ++ L+ Sbjct: 60 TFQGIPTDSVALEKYKASLGAFAYSATLPSAKDGVTVLENKDIKLTISNRGGQPKEVLLK 119 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 + +S V L+ N A + T + +S ++ + Sbjct: 120 EFKT---YDSLPVYLIKDWN------ATFNLSFTTAQNQTLSSKDLYFEPTLNENNGNKV 170 Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDT------VTNNSIDQIRFSPRGRIMRHKPQ 208 + + K + N E +L E Y+ + V N S + + + R + Sbjct: 171 LSMKLKTSENAYLEYVYTLPKEGYMLDVAVRSQGLSGVVNTS-KPMNIDWKLQARRMEKS 229 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI---P 265 Q + + + E +W+ + SV I P Sbjct: 230 VTYENRYTQ--ATVQYDGDRISRLS----QGGNDEQKEEKVNWVAYKQHLFTSVLISDNP 283 Query: 266 SKETSFHSQFKYLSDGHA-RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 + F S +S+G +Y F + ++ + + G ++ + Y Sbjct: 284 FAKGDFVSHNIAMSEGKDVKYTKNFLTSLPIQAKSGELSESLHFYFGPSDYNVLKQYNDK 343 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 + + + WG F ++ K +F+ + F + G+ I+L T+ V+LL P+ K YV Sbjct: 344 YELTEL-IPLGWGIFGWLNKWLFIPLYNFLTNYFSVGLVIILMTIIVRLLLSPIVYKSYV 402 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A MK ++P+I+E+ +K+ P Q+ + LY +NPL+GC P LLQ+PVF A++ Sbjct: 403 SQAKMKVLRPEIEEINKKY--EEPMKRQQETMALYNKAGVNPLSGCIPALLQLPVFLALF 460 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 +R + W DL++ D IF L +PFY HV ++P++ S+++FI Sbjct: 461 NFFPTEFGLRQKS-FLWAHDLSSYD--AIFELPFSIPFYGS---HVSLFPLLASIAIFIY 514 Query: 505 MKMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M+ P ++ PV+ +F +++ +GL +Y+ SN+++I I Sbjct: 515 SMMTMAQTAQPQQPGMPNMKFLIYLSPVMMLFFFNNYASGLSLYYFISNLLTIGIMLAIK 574 Query: 558 KMHGAEIGLIDRLRST 573 E + +++ Sbjct: 575 YWIIDEQKIHAQIQEN 590 >gi|315224395|ref|ZP_07866228.1| inner membrane protein OxaA [Capnocytophaga ochracea F0287] gi|314945671|gb|EFS97687.1| inner membrane protein OxaA [Capnocytophaga ochracea F0287] Length = 621 Score = 254 bits (648), Expect = 4e-65, Method: Composition-based stats. Identities = 124/615 (20%), Positives = 238/615 (38%), Gaps = 67/615 (10%) Query: 1 MERNWN---YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------TVKQPNQVDN 51 ME + L I++ W P EE+ + + T Q + Sbjct: 1 MEEKKFDLKSIIGFTLIFILLM-WFMNNNKPSEEELAKRKAQQEQQANQATNTQKDTHTA 59 Query: 52 SYAAVLIDD---------------RAQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLR 95 ++ + D A S V + +N + +I+ +G Q ++ L+ Sbjct: 60 TFQGIPTDSVALEKYKANLGAFAYSATLPSAKDGVTVLENKDIKLTISNRGGQPKEVLLK 119 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 + +S V L+ N T ++ +L T+ K+L+ Sbjct: 120 EFKT---YDSLPVYLIKDWNATFNLSFTTAQNQTLSSKDLYFEPTLSENNGNKVLS---- 172 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDT------VTNNSIDQIRFSPRGRIMRHKPQT 209 +KL + + T+ E Y+ + V N S + + + R + Sbjct: 173 MKLKTSENAYLEYVYTL-PKEGYMLDVAVRSQGLSGVVNTS-KPMNIDWKLQARRMEKSV 230 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI---PS 266 Q + + + E +W+ + SV I P Sbjct: 231 TYENRYTQ--ATVQYDGDRISRLS----QGGNDEQKEEKVNWVAYKQHLFTSVLISDNPF 284 Query: 267 KETSFHSQFKYLSDGHA-RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + F S +S+G +Y F + ++ + + G ++ + Y Sbjct: 285 AKGDFVSHNIAMSEGKDVKYTKNFLTSLPIQAKSGELSESLHFYFGPSDYNVLKQYNDKY 344 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 + + + WG F ++ K +F+ + F + G+ I+L T+ V+LL P+ K YVS Sbjct: 345 ELTEL-IPLGWGIFGWLNKWLFIPLYNFLTDYFSVGLVIILMTIIVRLLLSPIVYKSYVS 403 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A MK ++P+I+E+ +K+ P Q+ + LY +NPL+GC P LLQ+PVF A++ Sbjct: 404 QAKMKVLRPEIEEINKKY--EEPMKRQQETMALYNKAGVNPLSGCIPALLQLPVFLALFN 461 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 +R + W DL++ D IF L +PFY HV ++P++ S+++FI Sbjct: 462 FFPTEFGLRQKS-FLWAHDLSSYD--AIFELPFSIPFYGS---HVSLFPLLASVAIFIYS 515 Query: 506 KMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M+ P ++ PV+ +F +++ +GL +Y+ SN+++I I Sbjct: 516 MMTMAQTAQPQQPGMPNMKFLIYLSPVMMLFFFNNYASGLSLYYFISNLLTIGIMLAIKY 575 Query: 559 MHGAEIGLIDRLRST 573 E + +++ Sbjct: 576 WIIDEQKIHAQIQEN 590 >gi|332885946|gb|EGK06190.1| hypothetical protein HMPREF9456_00064 [Dysgonomonas mossii DSM 22836] Length = 650 Score = 253 bits (646), Expect = 7e-65, Method: Composition-based stats. Identities = 112/608 (18%), Positives = 237/608 (38%), Gaps = 90/608 (14%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN--------IQTVKQPN----- 47 M+ N L ++ + P E++ +++ QT+++ Sbjct: 1 MD--KNTITGFILIAAVIIGF-TLLSRPSSEDIERQKQQRIKDSIEYAQTLQREQENKID 57 Query: 48 -----------------QVDNSYAAVLIDDRAQALSMSPR--VELKNPSLIGSINLKGAQ 88 S + V + D + P + L+N L + + KG + Sbjct: 58 TSVVDKKTEKIDDFFSASAQQSDSTVAVTDSLPSAEQKPEQFITLENSKLKATFSTKGGR 117 Query: 89 FDDLNLRGY---HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145 + L+ Y + D N+ + L + ++ L ++ I Sbjct: 118 MVRVQLKDYMSYNRDDKKNTDSLYLFNNDADFTL------LLTNKQQKVLSTGKLIFTPI 171 Query: 146 SGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRG----- 200 + + ++ + ++ I F ++ D+ Y+ + + + + Sbjct: 172 QKEG-DNSLIMRYAYSDSQYIDFVYKLA-DDDYM--MKYDINMVGMQPMLARTYSDVFEM 227 Query: 201 ----RIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISD 256 R+ R + + V GD + +K+ E W+ + Sbjct: 228 KWSQRMRRQEKSVKNEQRYSHLTYKYVGGDVKEMSS-----DKNEEVEVKEPAKWIAFKN 282 Query: 257 KYWASVFIPSK--ETSFHSQFKYLSDGHARYQAKFSA----NEITILPGKSITTTNFLFA 310 +++A + I ET+ + +D ++ Y F A +SIT + Sbjct: 283 QFFAPILIADDKIETALLNSKVLQTDENSEYLKSFEATLYVPAKPGSAPESITAGFSYYL 342 Query: 311 GAKEFPTIHHYEKDLAIPR----FEMLIDWGWFYFIAKPMFMLMSYFYNLVGN----FGI 362 G + + +Y+ ++ + L+ GW F + ++ +NL+ N GI Sbjct: 343 GPMSYSLLKNYDSNVKDANKELDLDKLVPLGWTLFRWVNQYFIVP-IFNLLSNTGLSMGI 401 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKT 421 I+L T+ VKL+ PL K ++S+A M+ ++P+++E+ EK+ KQ Q+A + LY Sbjct: 402 VILLLTIIVKLVISPLTYKSFMSSAKMRVLRPQVEEINEKYPKQEQAMEKQQATMALYSK 461 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NP++GC P+LLQ+P+ A++ ++E+R + W DL+ D IF +P Sbjct: 462 AGVNPMSGCVPMLLQMPILIALFSFFPNAIELRQQS-FLWATDLSTYD--AIFEWKNHIP 518 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSP------PPADKGQAMILNWMPVVFVFALSSFP 535 H+ ++ I+M+++ + K + G ++ MP++F+F L+ +P Sbjct: 519 LIGT---HISLFCILMTITNIVYTKFNMEMTNTGQQQMPGMKWMMYLMPLIFLFMLNDYP 575 Query: 536 AGLIIYWS 543 +GL Y+ Sbjct: 576 SGLTYYYF 583 >gi|45656063|ref|YP_000149.1| hypothetical protein LIC10157 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|73921529|sp|Q72VY8|OXAA_LEPIC RecName: Full=Inner membrane protein oxaA gi|1902825|dbj|BAA19448.1| ORF2 [Leptospira interrogans] gi|2780768|dbj|BAA24371.1| ORF2; putative [Leptospira interrogans] gi|45599296|gb|AAS68786.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 627 Score = 252 bits (644), Expect = 1e-64, Method: Composition-based stats. Identities = 111/628 (17%), Positives = 243/628 (38%), Gaps = 84/628 (13%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--SYAAVLID 59 +R F+A+ LS+ I F+ + N E K Q+ K + Sbjct: 3 DRQTRLFLALILSMGIWMGVNYFFFPNTSTKKNTETKQTQSDKTSENTKQQITSGKTKES 62 Query: 60 DRAQALSMSPRVE--------LKNPSLIGSINLKGAQFDDLNLRGYH------LDVSSNS 105 + A + ++ + S I + G + ++ + + V+ + Sbjct: 63 NSADPVVQKEKITPFDTKKSFIVTDSYIVEFSSLGGKISKFYMKDFTGPNGELIQVARKN 122 Query: 106 PIVTLLSPSNTKNAYFAE---LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 P ++ + + + D+ + + +E+ +S + S I + Sbjct: 123 PETVVVDGKSYQAVELSRDKGFDFNFSDSLVEISDSPWNYIQFSLTEDKINHSISFSAVS 182 Query: 163 AN-NILFERTISL--DEHYLFKIVDTVTNNSIDQIRFSP-----RGRIM---------RH 205 + + ++ E+Y FK+ ++ N S +++ F+ R R Sbjct: 183 PDRSYQLKKEFRFYPSENY-FKLSISIINFSKEKLSFASQKNVRYLRTFGSLGPYPKDRP 241 Query: 206 KPQTATNTFGVQEGFIAVLGD--------------------KSLVEQKYS-DIEKSSISN 244 T F D S ++ +S +K S + Sbjct: 242 LSDRDTANFFRFYYLGGSFQDTLDGSSSVGFWSSVGNFFTGNSGTDESFSIKTDKESGVD 301 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 F + S +Y+ +V P + + + I + PG++ Sbjct: 302 FAGTGS------RYFIAVADPLDHKPHGIVLDNRPKNESGAVLVY--DNILLNPGENYNL 353 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPR------------FEMLIDWGWFYFIAKPMFMLMSY 352 + G +E + + + + G + ++ Sbjct: 354 DFASYIGIRESEGMAFKNPEFDPSQSKNSPFVGLSSDLNKSFNQGITTPFRNGIIWILKQ 413 Query: 353 FYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 Y + N+G +I++ + KL+F+PL +KQ S M+ + P++ + EKF P ++ Sbjct: 414 IYRFTIPNYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDP-KMR 472 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ ++LYK +N+NP+ GC P+++QIP+F A+Y S ++++ ++P + W+KDL+ D Sbjct: 473 QQKTMELYKKNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSP-FLWVKDLSEPD-- 529 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 + +P++ + + + ++M + Q +M+ D Q M++ MPV+ ++ Sbjct: 530 -VIWTSPAIPYFTQTGIGLNLLALLMVGTQVFQTRMTSVSMDPNQKMLMYVMPVMMLYIF 588 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + P+G+ +YW++ NV+SI QQ + + Sbjct: 589 WNMPSGVTLYWTFQNVLSIGQQWITNHL 616 >gi|90581132|ref|ZP_01236931.1| putative inner membrane protein translocase component YidC [Vibrio angustum S14] gi|90437653|gb|EAS62845.1| putative inner membrane protein translocase component YidC [Vibrio angustum S14] Length = 230 Score = 251 bits (642), Expect = 2e-64, Method: Composition-based stats. Identities = 90/226 (39%), Positives = 141/226 (62%), Gaps = 21/226 (9%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GW FIA P+ L+++ + +VGN+G+AI++ T+ V+ L +PL K QY S A M+ +QP Sbjct: 12 DYGWSSFIASPLHELLAFIHGIVGNWGVAIIILTLIVRGLMYPLTKAQYTSMAKMRMLQP 71 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 KI +RE+ Q + M++LYK +NPL GC P+L+Q+P+F A+Y V+++S E+R Sbjct: 72 KIQAMRERCGDD-RQRQSQEMMELYKKEKVNPLGGCLPLLIQMPIFIALYTVLNLSTELR 130 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-AD 513 +APF+GWI++L+A DP + PI+M +SMF K SP D Sbjct: 131 NAPFFGWIQNLSAQDPYYVL-------------------PILMGISMFFIQKNSPSTVTD 171 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q I+ +MPV+F FPAGL++YW SN+++++QQ +I + Sbjct: 172 PMQQKIMTFMPVIFTVFFLYFPAGLVLYWLTSNIVTLIQQTIIFRK 217 >gi|319954150|ref|YP_004165417.1| protein translocase subunit yidc [Cellulophaga algicola DSM 14237] gi|319422810|gb|ADV49919.1| protein translocase subunit yidC [Cellulophaga algicola DSM 14237] Length = 618 Score = 251 bits (640), Expect = 3e-64, Method: Composition-based stats. Identities = 116/612 (18%), Positives = 239/612 (39%), Gaps = 67/612 (10%) Query: 1 MERNWN---YFVAIALSVIIVYAWQNFYVYPRIEEMN-----NERKNIQTVKQPNQVDNS 52 ME + L I+ + + P EE+ E+ + + ++ +V+ Sbjct: 1 MEEKKLDVKSIIGFVLIFGILL-FMFWQNQPTDEEVAAKKVEQEQIDAKAKEEKVEVNTE 59 Query: 53 YAAVLIDDRAQAL---------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 A +++ + L+N + I+ KG Q + ++ + Sbjct: 60 QKAPVLNLQDSTAVTNYKNTIGAFGFTKPSEETTVLENNLVYLRISNKGGQIIEAKMKNF 119 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 + +S V L+ N A + T N +L ++ ++L+ I Sbjct: 120 ---TTYDSIPVYLVKDGNASFALNFSTNDNRTLNTADLFFEPSLTTSGDNQVLSMKAKI- 175 Query: 158 LVFKNANNILFERTISLDEHYLFKIVD------TVTNNSIDQIRFSPRGRIMRHKPQTAT 211 + + + D+ YL +V NN+ I + + +RH Sbjct: 176 ---SENQFLEYRYEMKPDD-YLVDFAIKTQGLSSVINNT-KPINLDWKLKAIRHSKSIKY 230 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + + + + + WL +++S+ +K Sbjct: 231 SNRYTR-----LTYNHEDGKISKLSDSSDDDEETEKDVKWLSYRQHFFSSILATNKPFES 285 Query: 272 HSQFKYLSDGHA----RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 F +Y +++ L G ++ + G + + Y+ Sbjct: 286 AKLFSKNLVEDESHTQKYMKDYASEMPLKLEGGELSYAMNWYYGPTDAKVLAQYKD---- 341 Query: 328 PRFEMLIDWGW--FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 E + +GW F I + +F + F + + GIAI++ T+ V+L P+ K Y+S Sbjct: 342 LGLEDSVPFGWGIFGLINRYVFTPLFTFLSGMVPAGIAIIIMTILVRLAMSPVTYKSYLS 401 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A MK ++P+I E+ EK+K + + Q+ ++L ++PL+GC P L+Q+P+F+A++ Sbjct: 402 QAKMKVLKPEIAEINEKYKDNAAKK-QQETMKLNTKAGVSPLSGCIPALIQMPIFYALFM 460 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 S +R P + W DL++ D I L +PFY HV ++PI+ S+++F M Sbjct: 461 FFPTSFALRQKP-FLWADDLSSYD--VIAQLPFTIPFYGD---HVSLFPILASIAIFFYM 514 Query: 506 K------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 M+ P I+ P++ + +S+ +GL +Y+ SN+I+I I Sbjct: 515 MMTTGQNMTQQPGMPNMKFIMYLSPLMMLVFFNSYASGLSLYYFISNLITIFIMLAIKNF 574 Query: 560 HGAEIGLIDRLR 571 + + +++ Sbjct: 575 ILDDAKIHAQIQ 586 >gi|294674133|ref|YP_003574749.1| inner-membrane protein, 60 kDa [Prevotella ruminicola 23] gi|294471953|gb|ADE81342.1| inner-membrane protein, 60 kDa [Prevotella ruminicola 23] Length = 587 Score = 250 bits (639), Expect = 5e-64, Method: Composition-based stats. Identities = 111/551 (20%), Positives = 224/551 (40%), Gaps = 61/551 (11%) Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A + V LKN + + N KG ++ + + ++ VTL + + + Sbjct: 34 AALNGKNQPVVLKNDKVELTFNTKGGTLAKAVIKNF--ENLNDQMGVTLFDENTQQMNFM 91 Query: 122 --AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 + + + T + P++ T L + N E L + Y+ Sbjct: 92 LAGKSENIITKDLFFTPSNVTDSTL------------TMTALAGNGGSIEFNYVLGKDYM 139 Query: 180 FKIV--------------DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 ++ D R +G ++ + T+ + G L Sbjct: 140 LHFNMKANGLQGMFAPNYQEMSIEWTDLARQQEKGFTFENR--YTSVTYKEKNGGTDYLS 197 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDGHAR 284 + S + N E+ W+ ++++++ I E + +S + + Sbjct: 198 ETS----------EKIDENIDEALDWVAFKNQFFSAALIAKDEFAANSLLTSIPQQKGSG 247 Query: 285 YQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWFY 340 Y +F+A T P + T ++ G +F I E+ A + E L++ GW+ Sbjct: 248 YLKQFNAKLKTAFDPTGAKATEFEMYIGPNDFRLIKDVEQQSAFGKDLDLEQLVNLGWWL 307 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAI----MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + + F + + ++G ++ +L T+ +K++ FP+ KK Y+S+A M+ ++PK+ Sbjct: 308 VRWINRWFTIYVF-DWLTSWGFSMGIVLILITLLLKVITFPMVKKSYMSSAKMRVLKPKL 366 Query: 397 DELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 DE +++ K Q+AM+QLY + ++PL GC P+L+Q P++ A++ + ++++R Sbjct: 367 DEATKQYDKPEDQMKKQQAMMQLYSQYGVSPLGGCLPMLIQFPIWMAMFFFVPNAIQLRR 426 Query: 456 APFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-QMKMSP 509 + WI DL+ DP T I+ + L F + M++ QM Sbjct: 427 ES-FLWISDLSTYDPIIEWGTQIWGIGDHLSLTCILFCVANVLYSYMTMRQQRDQMVGQQ 485 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 K ++ MPV+F F + + +GL Y+ S S + K E L+ Sbjct: 486 AEQMKMMQWMMYLMPVMFFFMFNDYSSGLNFYYFISLFFSAAIMWTLRKTTNDE-KLLAI 544 Query: 570 LRSTFSKNYNS 580 L + + +N N+ Sbjct: 545 LEAKYKENKNN 555 >gi|325282064|ref|YP_004254606.1| Membrane protein oxaA [Odoribacter splanchnicus DSM 20712] gi|324313873|gb|ADY34426.1| Membrane protein oxaA [Odoribacter splanchnicus DSM 20712] Length = 616 Score = 250 bits (639), Expect = 5e-64, Method: Composition-based stats. Identities = 116/615 (18%), Positives = 253/615 (41%), Gaps = 57/615 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK---------------Q 45 M+ N + + +I+ + P E++ ++ ++ Sbjct: 1 MD--KNTIAGLVIIFLILIGFSYL-TRPSKEQVAEMQRKQDSIARVDRLRAQELAAQQQA 57 Query: 46 PNQVDNSYAAVLIDDRAQAL-----SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 DN+ AA + ++ ++ + + + L+N + I+ G + ++L+ Y Sbjct: 58 QKTPDNTTAANPLATKSDSIFVQNDTENKIITLENDKIKLHISTLGGRIVYVDLKEYRTH 117 Query: 101 VSSNSPIVTLLSPSNTKNA--YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 +S + L T ++A ++T P+ T + + ++L Sbjct: 118 ---DSLPLVLWKNGETAFGMNFYARNQEINTEKFFFTPS--TTETTLYAQGNEQVLSMRL 172 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGR----IMRHKPQTATNTF 214 ++ + + ++ D Y+ N S I + + + + Sbjct: 173 YADSSRYLEYLYKLAPD-SYMTDFSIITHNMGDVIASNSSFLTLFWGINMPQLEKSKDFE 231 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 G + ++ + E+ ++ N W+ ++++S+ I + S Sbjct: 232 NRYTGVYYKFSEDAVENMSLTSDEEETLPN---KVQWIDFKQQFFSSILISEQPLSDVEL 288 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 +S + ++ + + F G + + Y L +P +I Sbjct: 289 KSNISKKDGYLKDAYAEIPLAYNGSANEQYNMQFFFGPNSYKVLKEYGDHLDLP---DVI 345 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVG----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + GW + + ++ F L N+GI I+L T+ +K++ FPL K Y+S A M+ Sbjct: 346 NMGWKWIAWFNKYFVIPIFNFLENHTALNYGIIILLLTLIIKIILFPLTYKSYMSQARMR 405 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++P++DE+ +K+ Q+A ++LYK +NP+ GC P+L+Q+P+ A++ + Sbjct: 406 VLKPQVDEIAKKYPADKAMERQQATMKLYKQAGVNPMGGCLPMLIQMPILIALFYFFPGA 465 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+R + W DLA+ D +I TL +PFY HV ++ ++M+ + I M M+ Sbjct: 466 IELRQQS-FLWATDLASYD--SIATLPFTIPFYG---NHVSLFCLLMTATNIIYMIMNNK 519 Query: 511 P-----ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 KG ++ MP++F+F +S+ +GL Y+ + +I+I+Q +I K + Sbjct: 520 NQPQNDQMKGMQTMMYIMPIMFLFIFNSYSSGLSYYYFIATLITILQTWIIRKFVDDQ-K 578 Query: 566 LIDRLRSTFSKNYNS 580 L+ ++ SK Sbjct: 579 LLKQIELAKSKPVKK 593 >gi|89074710|ref|ZP_01161168.1| putative inner membrane protein translocase component YidC [Photobacterium sp. SKA34] gi|89049474|gb|EAR55035.1| putative inner membrane protein translocase component YidC [Photobacterium sp. SKA34] Length = 230 Score = 250 bits (638), Expect = 5e-64, Method: Composition-based stats. Identities = 93/226 (41%), Positives = 143/226 (63%), Gaps = 21/226 (9%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GW FIA P+ L+++ + +VGN+GIAI++ T+ V+ L +PL K QY S A M+ +QP Sbjct: 12 DYGWSSFIASPLHELLAFIHGIVGNWGIAIIILTLIVRGLMYPLTKAQYTSMAKMRMLQP 71 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 KI +RE+F Q + M++LYKT +NPL GC P+L+Q+P+F A+Y V+++S E+R Sbjct: 72 KIQAMRERFGDD-RQRQSQEMMELYKTEKVNPLGGCLPLLIQMPIFIALYTVLNLSTELR 130 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-AD 513 +APF+GWI++L+A DP + PI+M +SMF K SP D Sbjct: 131 NAPFFGWIQNLSAQDPYYVL-------------------PILMGISMFFIQKNSPSAVTD 171 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q I+ +MPV+F FPAGL++YW SN+++++QQ +I + Sbjct: 172 PMQQKIMTFMPVIFTVFFLYFPAGLVLYWLTSNIVTLIQQTIIFRK 217 >gi|162450792|ref|YP_001613158.1| inner-membrane protein [Sorangium cellulosum 'So ce 56'] gi|161161374|emb|CAN92679.1| probable inner-membrane protein [Sorangium cellulosum 'So ce 56'] Length = 594 Score = 250 bits (638), Expect = 5e-64, Method: Composition-based stats. Identities = 121/608 (19%), Positives = 236/608 (38%), Gaps = 99/608 (16%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 MER+ N + L + I+ F+ + + +Q + + + A Sbjct: 1 MERS-NIAKWLFLGLAIIL----FFQFGKPLLFGESAPQLQPLDVNDSTAPAERAPP--- 52 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTKN 118 + ++ G L + Y + L++ S Sbjct: 53 --------EMCVIDGDRFKAELSTHGGSLRHLWMTDPKY-TTGDGERRPMDLVTTSLESR 103 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH- 177 ++ + ++P + W L + + + ++ + ++ Sbjct: 104 MPLRTDLHLPGGSAQQVPFDDLDWKLSA----QDGKSCTFTYVD-DSTRLTKVVAATGRP 158 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ---EGFIAVLGD-------- 226 + + TV N + + +H+ ++ Q EG + ++ + Sbjct: 159 FELSVQMTVENLAQEP---------RKHRLAVEQTSWRTQKETEGHLGMISEWITETVAA 209 Query: 227 ----------KSLVEQKYSDIEKSSISNFHESNS--WLGISDKYWASVFIPSKETSFHSQ 274 + + D E ++ + + +S Y++ + IP + + Sbjct: 210 TDQKTERQLPDAFEPGDFKDPEFTAERWRRTPGNARFAAVSSSYFSKIAIPLEGPGQPTA 269 Query: 275 FKYLSDG---------------HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 + D Y+A+ + E + PG ++T F G KE + Sbjct: 270 ETQIEDIWESSKFQDKSKDPNFGHVYRARLAYPEHELAPGGAVTYKLLSFTGPKERDLLA 329 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 + ++ +I+ GWF IAK + + Y VG++G AI+L T+ V+LL FPL+ Sbjct: 330 AVDHGVS-----EVINLGWFSPIAKLLVSYLYVLYGAVGSWGWAIVLLTITVRLLLFPLS 384 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI-NPLAGCWPILLQIP 438 +Q S A M+ ++P++DE+ ++K Q AM +L++ + + NP+ GC+P+LLQ+P Sbjct: 385 IQQIKSAAAMRKLKPEMDEINARYKDDAAQRG-LAMQELWRKNKVANPVVGCFPMLLQMP 443 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 V+FA+Y + ++E+ H PF I DL+A I PI++ Sbjct: 444 VWFALYTALQTAVELYHTPFGPVIPDLSAPGRYYII-------------------PIVLG 484 Query: 499 LSMFIQMKMSPPPADK-GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S FIQ K+ PP D Q M+L MP +F + PAGL +Y + + I QQ ++ Sbjct: 485 GSSFIQQKLMPPQGDPAQQKMMLYLMPGIFTAMMLFLPAGLGVYMLTNTWLGIGQQVLVE 544 Query: 558 KMHGAEIG 565 + A+ Sbjct: 545 RYLKAKNE 552 >gi|225164119|ref|ZP_03726399.1| 60 kDa inner membrane insertion protein [Opitutaceae bacterium TAV2] gi|224801254|gb|EEG19570.1| 60 kDa inner membrane insertion protein [Opitutaceae bacterium TAV2] Length = 616 Score = 250 bits (638), Expect = 6e-64, Method: Composition-based stats. Identities = 118/609 (19%), Positives = 225/609 (36%), Gaps = 77/609 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M++ N + + V A + TV P + A+ Sbjct: 1 MDK-KNLILGVTFLVAAFAALLYSSRQQSQQRPPAPPSPAPTVSAPATAGDPLASAATAA 59 Query: 61 R--------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A + + L N + G D+ L+ Y + + P V + Sbjct: 60 PANTTFAPIASNKTEATITTLSNDYVEVRFTNFGGAIRDVALKKYPAAIGAAKPFV--FN 117 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 + L + A + + L+S + + R Sbjct: 118 EEHADPI----LGFTDIAGL----DKEARFELVSAT----ADEVVFRAVFEKRLEVTRRY 165 Query: 173 SL---------DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 L + Y TV N + + + N G + Sbjct: 166 VLAPATGDKSSRDPYRILHETTVKNLADHTTPVTSLNLSLGTAALMGANDTGFYLNVASY 225 Query: 224 LGDK----SLVEQK----YSDIEKSSISNFH-----ESNSWLGISDKYWASVFIPSKE-- 268 GDK E K ++ + + W + ++++AS++ P + Sbjct: 226 NGDKAQFTDRNELKGGGFFASMGMGDPNPKAYIIQPGPVQWASVKNQFFASIYTPDDKLI 285 Query: 269 -------TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 SF + + + A I P + T T L+ G KE+ + ++ Sbjct: 286 EGVTVRRVSFAAPLPGTTTENIGLTASAKVELPAIAPQGTATFTGKLYVGPKEYTRLKNF 345 Query: 322 EKDLAIPRFEMLIDWGWFYF--------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + + ++ + ++F IA M M+M+ + VGN+G+AI+L T+ +K Sbjct: 346 TRGE-----DKVMQFDRYFFNRIFLSGVIAPFMNMMMNGIHAFVGNWGLAIVLMTLILKT 400 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 + P S M+ +QP + E+ EK+K +P + +A++ L+K H +NP+ GC P+ Sbjct: 401 VTLPFTLAASRSAKRMQKLQPMMKEINEKYKDNPTKK-NQAVMALFKEHKVNPMGGCLPV 459 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+ IP+F A + ++ + E+R + W +DL+A D L + + + I Sbjct: 460 LITIPLFVAFFAMLQGTAELRFQS-FLWARDLSAPDTIARIPLGFMT-------LPINIL 511 Query: 494 PIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P++M +M QM+++P P+ D QA I MP +F +F L +Y + + + +IVQ Sbjct: 512 PLLMGATMVFQMRLTPSPSVDNAQAKIFKMMPWIFTIICYNFSCALALYSTINGLYTIVQ 571 Query: 553 QAVIMKMHG 561 Q + + Sbjct: 572 QLAVNRFTK 580 >gi|154494956|ref|ZP_02033961.1| hypothetical protein PARMER_04002 [Parabacteroides merdae ATCC 43184] gi|154085506|gb|EDN84551.1| hypothetical protein PARMER_04002 [Parabacteroides merdae ATCC 43184] Length = 638 Score = 249 bits (637), Expect = 6e-64, Method: Composition-based stats. Identities = 128/631 (20%), Positives = 240/631 (38%), Gaps = 83/631 (13%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYA 54 M+ N + L I++ + + P E++ +R I+ KQ Q Sbjct: 1 MD--KNTIIGFLLIGIVLIVF-TWLNQPTPEQIEAQRRMQDSIARIEYAKQLEQQKELNR 57 Query: 55 AVLIDDRAQALSMSPRVE---------------------LKNPSLIGSINLKGAQFDDLN 93 DD L S R+ L+N + + KG + + Sbjct: 58 EAKADDELAGLPDSVRLARLQNTFGVFADAMVGEEGSTVLENELIEVRLANKGGRIGYVR 117 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ Y D P+V L ++K + + TA+N + + + + G Sbjct: 118 LKKY--DNYKGEPLV-LFDEKDSKFDF-----TLVTADNRVVNTGDLYFTPVKGN---DR 166 Query: 154 TPIKLVFKNANNILFERTISLD-EHYL--FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210 I + + +L + Y+ F I T N + + + Q Sbjct: 167 NSITMRLNTGEGSHLDFMYTLKPDDYMLQFSIKGTGLNGVLSPGTTALDLLWQQKITQQE 226 Query: 211 TNTFGVQEGFIAVL----GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 D + + K+ W+ D Y++S+ I Sbjct: 227 KGRKFEDRYATVYYKFMADDVEYLSET-----KNDSKQLSNRLKWVAYKDMYFSSILIAG 281 Query: 267 KETSFHSQFKY---LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 E + DG + K + + L G T + G +F + Y+ Sbjct: 282 NEGFESTTIDSKMLPEDGSFLKEYKTTTSVPFDLKGNEAT-DMRFYFGPNQFSLLKSYDD 340 Query: 324 DLAIPR---FEMLIDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTVFVKLLFFP 377 D+ E ++ GW F + ++ ++ + ++G+ I L TV VKL+ FP Sbjct: 341 DVEKADQLDLEKIVPLGWGIFRWVNQYFVIPLFNFLGQFIHSYGLLIFLLTVIVKLILFP 400 Query: 378 LAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 L K Y+S+A M+ ++P+++EL K+ Q Q+A+++LY +P+AGC P+LLQ Sbjct: 401 LTYKSYMSSAKMRVLRPQVEELNAKYPGQDKAVERQRAIMELYSRAGASPMAGCVPMLLQ 460 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPI 495 +P+ A++ ++E+RH + W DL+ D I + +P P F H+ ++ + Sbjct: 461 MPILVALFMFFPSAIELRHQS-FLWAHDLSTYD--AIVSWNTYIPIITPYFGNHISLFCL 517 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVV----------FVFALSSFPAGLIIYWSWS 545 +M+++ I K + + GQ MP + + + + +GL Y+ S Sbjct: 518 LMTVTNIIYTKFNMDQTNTGQQQ----MPGMKAMMYMMPLMMLVFFNQYASGLTYYYFIS 573 Query: 546 NVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +I+I+Q VI + E L+ +L K Sbjct: 574 TLITILQT-VIFRYTINEDKLLAKLEENKKK 603 >gi|260592831|ref|ZP_05858289.1| inner membrane protein OxaA [Prevotella veroralis F0319] gi|260535201|gb|EEX17818.1| inner membrane protein OxaA [Prevotella veroralis F0319] Length = 641 Score = 249 bits (636), Expect = 8e-64, Method: Composition-based stats. Identities = 125/613 (20%), Positives = 253/613 (41%), Gaps = 59/613 (9%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ----TVKQPNQVDNSYAAVLIDDRAQ 63 F+ IAL V+ +AW + P E++ ++K + + Q AA L +AQ Sbjct: 9 FILIAL-VLFGFAW---WQQPSKEQLEQQQKEARLDSIAAAKKAQSQQLQAAKLAQQKAQ 64 Query: 64 ALS------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGY------HLDVSSNS 105 A + + + LKN + +++ KG ++ Y D S + Sbjct: 65 AATDTTALFHSALNGKAQDITLKNGKVELTLSTKGGVVRKAVIKNYVGHDIDVKDGSKDQ 124 Query: 106 PIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +TL S ++ + A+ + T + P++ T + + L + Sbjct: 125 KDLTLFSGNDQNLNFMLSAKTSNIETKDLYFTPSNVTDSTVTLTADAGQGKTLTLNYTLG 184 Query: 164 NNILFERTISLDE-HYLFKIVD-TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 + L ++ + +F + N D+ R RG + ++ AT T+ +G Sbjct: 185 KDYLLHMSLQAEGMSGMFAPNYNQMDINWEDRCRQQERGFMFENR--YATLTYKKHDGST 242 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-D 280 L + S E W+ ++++++V I + +Q K + Sbjct: 243 DYLSETSEK-----------EETTEEPMDWVAFKNQFFSAVMIAKDNFATGAQLKSTPLE 291 Query: 281 GHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDW 336 +Y +++AN P + + G +F + EK+ + + L+ Sbjct: 292 KGTKYLKQYAANMKAGFDPTGKKASEFEFYFGPNDFRLLQSVEKESRFGKDLDMQRLVYL 351 Query: 337 GWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 GW F + + F L V G+ ++L T+ +KL+ +P+ KK Y+S+A M+ ++P Sbjct: 352 GWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITYPMVKKSYMSSAKMRVLKP 411 Query: 395 KIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 K+DE ++F K Q+AM+Q Y + ++PL+GC P+L+Q+P++ A++ + ++++ Sbjct: 412 KLDEATKQFNKPEDQMQKQQAMMQKYAEYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQL 471 Query: 454 RHAPFWGWIKDLAAADP-----TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-QMKM 507 R + W+KDL+ DP ++++ + L F + ++ QM Sbjct: 472 RGES-FLWMKDLSTYDPILSWNSDLWLIGDHLSLTCILFCGANLLYSWFTMQQQKDQMVG 530 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 K ++ MP+ F F +++ +GL Y+ S S + K E L+ Sbjct: 531 QQADQMKMMQYMMFAMPLFFFFMFNNYSSGLNFYYFVSLFFSAAIMWTLRKTTNDE-KLL 589 Query: 568 DRLRSTFSKNYNS 580 L + + N+ Sbjct: 590 AILEAHRKEAKNN 602 >gi|255034943|ref|YP_003085564.1| putative inner membrane protein translocase component YidC [Dyadobacter fermentans DSM 18053] gi|254947699|gb|ACT92399.1| 60 kDa inner membrane insertion protein [Dyadobacter fermentans DSM 18053] Length = 602 Score = 249 bits (636), Expect = 1e-63, Method: Composition-based stats. Identities = 115/607 (18%), Positives = 235/607 (38%), Gaps = 65/607 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N+ + + L ++++ +Q P+ E + + V +P+ V + Sbjct: 1 MD--KNFVIGLVLIMLMLIGYQILV--PKPVEPTPVAEVKKEVSKPSSVTSDTTQNSSQS 56 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + ++ KG ++ L+ Y + + L++ ++ K Sbjct: 57 VDSLAIPQKDLVIETKDARVVFTNKGGVMKEVMLKNYKT---YDQKPLYLIAENHNK--- 110 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN--ANNILFERTISLDEHY 178 ++D + ++ L N T + L + ++ NN E+T + Sbjct: 111 -FQIDLPTQTGDVRLTN-QTFTTDAQDRTLAEGDSAVITYRATIKNNQTVEQTYVVRGTG 168 Query: 179 LFKIVDTVTNNSIDQIR-----------FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 I + + + +++ N + + +A Sbjct: 169 YV-IDYGIKASGALPANKSVEFHWDNDLLQLENDMKKNREVVTVNYYTDELKSLATSPTS 227 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE--TSFHSQFKYLSDGHARY 285 + E+ + W I KY+ + I K T+ + + Sbjct: 228 NEEEKT------------ADPVKWFTIKHKYFLAGLIAEKHPLTNVTVRANVNPEDSVIV 275 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG------WF 339 + I + + G E+ H + F+ + G Sbjct: 276 KNMNVFAGIPTAAVQKGEANFQFYLGPNEY----HIVDKVKAENFDQNVYLGYAFLKPIN 331 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 F P+F L+ F V N+G+ I+L +FVK L PL K Y+S A M+ + P+++++ Sbjct: 332 KFFLVPLFNLIEGF---VSNYGLLIILLVLFVKTLLTPLTYKSYISMAKMRILGPELEQI 388 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+ K + Q+ ++LY+ ++PL+GC P+L +P+ F+++ + +E+R + Sbjct: 389 REQNKDDLAK-QQQEQMKLYQQVGVSPLSGCVPVLATMPILFSLFFLFPNLIELRQQS-F 446 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADK- 514 W DL+ D + F L +PF + H+ ++ I+M+ S + + +P Sbjct: 447 LWADDLSTYD--SFFKLPFEVPFGIGN--HISLFTILMTASSIGYAYYNNQNTPTQPGPV 502 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 + MP++F+F L+SFPAGL Y+ SNV++I QQ +I + E + + L Sbjct: 503 NMKALGYVMPLMFMFILNSFPAGLTFYYFVSNVVTIAQQLLIKRFVN-EDKIKNILEENR 561 Query: 575 SKNYNSQ 581 KN + Sbjct: 562 KKNATGE 568 >gi|298373472|ref|ZP_06983461.1| inner membrane protein OxaA [Bacteroidetes oral taxon 274 str. F0058] gi|298274524|gb|EFI16076.1| inner membrane protein OxaA [Bacteroidetes oral taxon 274 str. F0058] Length = 633 Score = 249 bits (635), Expect = 1e-63, Method: Composition-based stats. Identities = 110/628 (17%), Positives = 238/628 (37%), Gaps = 75/628 (11%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMN----------NERKNIQTVKQPNQVDNSY 53 N + I L V I +Q F P E++ N + Q Q S Sbjct: 2 NKQTVIGIILIVAIFIGFQYF-NKPSKEQIAERQRINDSIKNAQTEQQLAIQQQVTPTSD 60 Query: 54 AAVLIDDRA-----------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 ++ + A + ++ ++ L + KG L+ Y Sbjct: 61 TTRIVASDSLREAHFGIFAKAAKGDTAQITIETELLKLRFSPKGGFVSYAELKNYKT--Y 118 Query: 103 SNSPIVTLLSPSNTKNAYFAELD----------YVSTANNIELPNSNTVWNLISGKILTP 152 P+V S + Y + N NT+ L L P Sbjct: 119 DKKPLVLFEGESENSFGITMQTSDNRVLTTNEVYFVPQPITKDGNGNTILTL----RLQP 174 Query: 153 TTP--IKLVFKNANN---ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 T I ++K N + F+ + Y + + + +IR GR ++ Sbjct: 175 ETDSYIDFIYKIPQNSYCVDFDIVAHNMQSYFPPMTNRLDFTWNTKIRQQELGRKTENRY 234 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 T + D + K K+ + W D +++++ + Sbjct: 235 ATLNYMYT----------DNDIERLKEG---KNDAKSASTPTKWFAAKDHFFSTILMSKT 281 Query: 268 ETSFHSQFKYL-SDGHARYQAKFSANEITILPGKSITTTN-FLFAGAKEFPTIHHYEKDL 325 + + + SD +++Y ++ + + TN L+ ++ + + L Sbjct: 282 GFATANLSSEIYSDENSKYLKNYTVHSVINFDATGNKPTNLQLYFVPNQYKVLAGFNDGL 341 Query: 326 AI---PRFEMLIDWGWFYFIAKPMFMLMSYFY---NLVGNFGIAIMLTTVFVKLLFFPLA 379 P + LI GW F + ++ F + + ++G+ I++ TV +K++ PL Sbjct: 342 DKAQRPNLQELIPLGWTLFRWVNKYAIIPLFNLLGSFMSSWGLIILIVTVIIKIVLLPLT 401 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K Y+S+A M+ ++P++D + E+ Q+A + LY++ ++P+ GC P++LQ+P+ Sbjct: 402 FKSYMSSAKMRVLKPQVDAINERIPADKMMERQQAQMSLYRSVGVSPMGGCLPMILQMPI 461 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 A++ + + E+R + W DL+ D T +PF H+ ++ ++M++ Sbjct: 462 LVAVFMYLPSAFELRQQS-FLWATDLSTFDTLPFLTWNTAIPFIG---KHISLFCLLMTI 517 Query: 500 SMFIQMKMSP------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + I K++ ++ MP++F F + + +GL Y+ S +++++Q Sbjct: 518 TNVIYTKVNMAATAGSNQQMAMMKWMMYLMPLMFFFIFNEYASGLTYYYFVSLLLTVLQT 577 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + ++ + L+ +L ++ Sbjct: 578 -YLFRLFVNDQKLLQQLELAKQTKKPAK 604 >gi|313674427|ref|YP_004052423.1| membrane protein insertase, yidc/oxa1 family [Marivirga tractuosa DSM 4126] gi|312941125|gb|ADR20315.1| membrane protein insertase, YidC/Oxa1 family [Marivirga tractuosa DSM 4126] Length = 617 Score = 249 bits (635), Expect = 1e-63, Method: Composition-based stats. Identities = 133/614 (21%), Positives = 243/614 (39%), Gaps = 74/614 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE--EMNNERKNIQTVKQPNQVDNSYAAVLI 58 M++N + + ++I Y W + E E N +N Q K+ + + AA +I Sbjct: 1 MDKNQATGLILISILMIAYFWFFADAPQQPENIESNQVEQNDQQQKETTASNTNQAAAVI 60 Query: 59 DDRAQ---------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 + + A S ++ N KG + + L+ + Sbjct: 61 ESDSSLNRSLVNQFGAFAGVAKGESQISTFNTETIAIQFNSKGGKVKSVELKDFK-TFD- 118 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT--PTTPIKLVFK 161 P++ K EL + + A + L + + L+ T IK V + Sbjct: 119 GQPLIITNEEDEEK-----ELLFNTAAGEVNLYDLYFEMQGSPKRNLSNGDTIQIKFVAQ 173 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNS------IDQIRFSPRGR-------IMRHKPQ 208 A N E+ +L + +++ ++ N DQ+ + + + + + Sbjct: 174 VAPNKSIEQIYTLSGN-QYQVGYSLAFNGFTNEILGDQLTLRWNKKMRKFEKDLEQSRTK 232 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 N + +EG L E+ D E+ E W ++ I Sbjct: 233 VTMNYYSTEEGM------DGLSERSDDDSEE-----VAEPVKWFSFKQNFFMEALITDIP 281 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT-TNFLFAGAKEFPTIHHYEKDLAI 327 + D Y + A L S + G + T+ Sbjct: 282 MKRAEFATDIEDLSDEYVKRGKAKVEIPLSEVSNRAGEFKYYFGPNNYKTLQKV-----A 336 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFY---NLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 P FE + GWF +++++ FY + ++G I++ + +KL PL+ K YV Sbjct: 337 PDFEENVYLGWFPISLVNKYVIINVFYILEKYISSYGWIIIILVLLIKLALSPLSYKSYV 396 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A K ++P++DE++EK Q Q + LY+ +NPL+GC P+LLQ+P+ FA++ Sbjct: 397 SMAKTKVLKPQLDEIKEKHGGD-MQKAQADQMDLYRKVGVNPLSGCIPLLLQMPILFAMF 455 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 S+E+R + W DL+ D ++ +L +PFY HV ++ I+M+LS + Sbjct: 456 YFFPSSIELRQES-FLWATDLSTYD--SVLSLPFEIPFYGD---HVSLFTILMTLSTLLI 509 Query: 505 MKMSPP--PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 I +MPV+F+F L+SFPA L Y+ +N+I+ QQ +I +M Sbjct: 510 TWSQGQVSSVQGPMKNIQYFMPVIFMFVLNSFPAALSFYYLIANLITFGQQTLIRRMIDE 569 Query: 563 EIGLIDRLRSTFSK 576 D+++ + Sbjct: 570 -----DKIKQILEE 578 >gi|303237161|ref|ZP_07323731.1| membrane protein insertase, YidC/Oxa1 family [Prevotella disiens FB035-09AN] gi|302482548|gb|EFL45573.1| membrane protein insertase, YidC/Oxa1 family [Prevotella disiens FB035-09AN] Length = 638 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 119/626 (19%), Positives = 241/626 (38%), Gaps = 78/626 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------------RKNIQTVKQPNQ 48 M+ N AL ++++ + ++ P +E+ + +K + K+ Q Sbjct: 1 MD--KNTIAGFALIALVLFGF-AWWQQPSEKELAQQRTEFVKDSIANAKKIAKQKKEVAQ 57 Query: 49 VDNSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY------H 98 N A D A A + + LKN + ++N KG ++GY Sbjct: 58 TANKTIAANADTTALFYAAANGTAQNIVLKNNKVELTLNTKGGVVRQAIIKGYTGHNVTS 117 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 D ++ VTL S ++ + + + +NIE N + ++ + L Sbjct: 118 KDRKTDKQDVTLFSGADQELNFI----LATKQDNIETKNMYFTPSNVTDST------VTL 167 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVT----------NN----SIDQIRFSPRGRIMR 204 + + L YL + T N ++ + G Sbjct: 168 TATDKSGKTLVLDYKLKSPYLLSLNIKATGMNGLFKPGENQLLIDWQEKCKQQELGYTFE 227 Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 ++ AT T+ EG L + K E W+ ++++++V I Sbjct: 228 NR--YATLTYKESEGSTDYLSET-----------KEDEKATEERLDWVAFKNQFFSAVMI 274 Query: 265 PSKETSFHSQFKYL-SDGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYE 322 + ++ K + + Y ++ A+ T P + + + G +F + E Sbjct: 275 SKDGFAIGAKLKSIPQQKESHYLKQYHASMNTAFDPTGAKASQFEFYFGPNDFRLLQSVE 334 Query: 323 KDLAIPR---FEMLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFP 377 + + L+ GW F + + F L + G+ ++L T+ +K + FP Sbjct: 335 NQSTFGKSLDMQRLVYLGWPLFRIINRWFTIYVFDWLSKLFPMGVVLILITLLLKFITFP 394 Query: 378 LAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 + KK Y+S+A M+ ++PK+DE +++ K Q+AM+Q+Y + ++PL+GC P+L+Q Sbjct: 395 MVKKSYMSSAKMRVLKPKLDEATKQYNKPEDQMQKQQAMMQMYSEYGVSPLSGCLPMLIQ 454 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP-- 494 P++ A++ + ++++R + W+ DL+ DP ++ + + Sbjct: 455 APIWIAMFNFVPNAIQLR-GEKFLWMDDLSTFDPIISWSQNLWIIGDHISLTCILFCATN 513 Query: 495 IIMSLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 I+ S Q K Q ++ MPV F F + + +GL Y+ S S Sbjct: 514 ILYSWFTMQQQKDQMVGQQAEQMKTMQWMMYLMPVFFFFMFNDYSSGLNFYYFISLFFSA 573 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSK 576 + K E L+ L + ++ Sbjct: 574 AIMWTLRKTTDDE-KLLSILEARRAE 598 >gi|288818681|ref|YP_003433029.1| inner membrane protein [Hydrogenobacter thermophilus TK-6] gi|288788081|dbj|BAI69828.1| inner membrane protein [Hydrogenobacter thermophilus TK-6] gi|308752269|gb|ADO45752.1| membrane protein insertase, YidC/Oxa1 family [Hydrogenobacter thermophilus TK-6] Length = 501 Score = 248 bits (633), Expect = 2e-63, Method: Composition-based stats. Identities = 122/564 (21%), Positives = 232/564 (41%), Gaps = 89/564 (15%) Query: 1 MERN----WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53 ME+N F + + ++++ + ++ I + +R+ +Q+ Q Sbjct: 1 MEKNEIDVKRLFALMLVVTLLMFGLELYTYYFSPKEIPQKAVKREEVQSFPQLMLGSMRE 60 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + + +A ++L+G + L + Y D L++ Sbjct: 61 SKKPVQIQAFDFRQ----------FTLLVSLEGGKIVKLVDKKYSYD---------LITD 101 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + K + Y P+ + N +I I + + + + I + ++ Sbjct: 102 TERKLNVYPLEVYTGN------PDLDQKLNFAPYQITREGDSIVMTYTDGS-ISLTKRLT 154 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 +E Y ++++ + SP ++ P+ + F G + +G K Sbjct: 155 YEEGY---FKLSISSKGL----PSPLYVVVGSHPK--GDEFYTHSGPVLSIGG------K 199 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 ++ SI + S I FK + Sbjct: 200 VERLDVGSIKGRE------------FLSGDISFAGEESRYYFKGFVGKIPSVLIYKVGED 247 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 L ++ +AGAKE+ + +ID+G + KP+F+ M + Sbjct: 248 KDSLTLVEVSNPLIFYAGAKEYSRLKKI-------GLSDVIDYGTLKILVKPLFIFMYWI 300 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y + ++ +I+ T+ V++ FPL K +S + + PK+ E+REK+K+ P + +Q+ Sbjct: 301 YEHLRSWVFSILALTLLVRVFMFPLTYKSTISMMKLSELAPKVQEIREKYKEDPTK-MQE 359 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LY NP++GC P++LQIPVFFA+YKV++I+ +++ A WI L+ DP I Sbjct: 360 EMMKLYSQVGFNPMSGCLPMILQIPVFFALYKVLTITADLQLASM-LWIPSLSHKDPYYI 418 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 PIIM L+M Q +SP P DK Q ++ V F F +S Sbjct: 419 L-------------------PIIMGLTMIAQQFISPNP-DKTQNFMMYVSSVAFTFLFAS 458 Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW+++N+ ++ Q +I Sbjct: 459 FPAGLVLYWTFNNIFNMGQSYLIK 482 >gi|187918308|ref|YP_001883871.1| putative inner membrane protein translocase component YidC [Borrelia hermsii DAH] gi|254772751|sp|B2S0E5|OXAA_BORHD RecName: Full=Inner membrane protein oxaA gi|119861156|gb|AAX16951.1| 60 kDa inner membrane protein YidC [Borrelia hermsii DAH] Length = 545 Score = 247 bits (632), Expect = 3e-63, Method: Composition-based stats. Identities = 134/578 (23%), Positives = 245/578 (42%), Gaps = 63/578 (10%) Query: 1 MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M ++ AI LS+ + + F+ + M+ E D +++ Sbjct: 1 MSQSKRILRAIYLSLFFIGIFMIIDDIFFSHKSPSVMDKEI----GFNLDKDFDIDNSSI 56 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 D + S ++++ + + L L+ + + +V + Sbjct: 57 DEDYALNLSANSKDIDVETGIYYATFSTFRGDLISLKLKDHLNLEKEPTEMVKVNMDR-- 114 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-- 174 E + T +N+ + +++ T + N + + + Sbjct: 115 ------ESLFYVTLDNL----TRDLFSYDRVDDYTHDFKTNFEY-NGKFYEYIKRYTFSN 163 Query: 175 DEHYLFKIVDTVTN-NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI---AVLGDKSLV 230 YL K+ + N ++ D ++ + + +Q AV D L Sbjct: 164 KGEYLIKLEIFLNNIDANDNSDIDSYKFVLSSDIEKLSERGKLQYNNYLSQAVYFDTKLR 223 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 K +S W+G KY+ + + + + +FK S + Sbjct: 224 Y------GKDGLSVISPK--WVGSGTKYFEVLV---SKENMNVEFKQESKILKAFILNKV 272 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD------LAIPRFEMLIDWGWFYFIAK 344 N+ I+ T +++AG K+ + + K+ L+ F M ++ YFI Sbjct: 273 GNKN-------ISDTFYIYAGPKDNGYLDLFNKEDLNSFGLSNVEFGMSVEKSLLYFIQV 325 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PM ++M FYN++ N+G++IM T+ V++L FPL K + +TA + +QPK+ E++ KFK Sbjct: 326 PMQLIMQIFYNVIPNWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFK 385 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIK 463 P + L + M +LY+ +NPL GC+PILLQ+PVFFA+Y +++ +R A F GWI Sbjct: 386 NDP-KRLNEEMGKLYREEGVNPLGGCFPILLQLPVFFALYGLVNNFFLLRGASFIPGWID 444 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMIL 520 DL+ D F + + + + I P IM ++ I +S + K Q IL Sbjct: 445 DLSIGDSIYYFG------YKVFMWTDIRILPFIMMVTQLISTIISSNVSFKSLGSQQKIL 498 Query: 521 NW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + MP++F F L P+GL+IYW +N+ +I+QQ I Sbjct: 499 YFGMPIMFFFILYDMPSGLLIYWITTNIFTILQQYYIK 536 >gi|332293587|ref|YP_004432196.1| membrane protein insertase, YidC/Oxa1 family [Krokinobacter diaphorus 4H-3-7-5] gi|332171673|gb|AEE20928.1| membrane protein insertase, YidC/Oxa1 family [Krokinobacter diaphorus 4H-3-7-5] Length = 628 Score = 247 bits (631), Expect = 4e-63, Method: Composition-based stats. Identities = 130/628 (20%), Positives = 247/628 (39%), Gaps = 88/628 (14%) Query: 1 MERNW--NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M++N+ N + + L I+ W ++ P EE+ E + +Q + ++ AA+ + Sbjct: 1 MKKNFDTNSLIGMLLMGGILV-WIIYFNKPTPEEI--EAQKAAQTEQLQETEDDVAALPV 57 Query: 59 DDRAQALSM--------------------------SPRVELKNPSLIGSINLKGAQFDDL 92 D A A++ + N L ++ KG ++ Sbjct: 58 MDAAPAIATDSLSNVALQNRLGTFAYSGSLPSAKEGATTTIANDVLELKVSNKGGYITEV 117 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWN-LISGKILT 151 L H S V L+ N++ STA+N L + + +S Sbjct: 118 KLLK-HSTFD--SIPVYLIKDGNSQFNVS-----FSTADNRNLNTKDLFFEPTLSKNGGN 169 Query: 152 PTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTN-----NSIDQIRFSPRGRIMRH 205 +KL + + + L E Y+ N+ + +R + MRH Sbjct: 170 DVLSMKLKVSPSEYLEYR--YELKEGDYMMDFGMKSQGLSSRLNTSNPMRMQWDFKGMRH 227 Query: 206 -KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK-SSISNFHESNSWLGISDKYWASVF 263 + Q+ N + E K + E W+ +++S+ Sbjct: 228 ARSQSYENRYTRLTY--------KYEEDKTDKLSPAGDDDEIEEDLVWMNYRQHFFSSML 279 Query: 264 I---PSKETSFHSQFKYLS----DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFP 316 I P KE S Y D + ++ ++ + + ++ G ++ Sbjct: 280 ISKTPFKEARLSSTDLYKEADDRDEATIFTKEYKSDVLLEAKNGELDYAMQMYYGPTDYT 339 Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + Y++ L M + WG F F+ K + + F GIAI++ T+ +KLL Sbjct: 340 ILKSYDQGLDEA---MPLGWGIFGFLNKYLVIPFFAFLTGFLPAGIAIIVMTISIKLLLS 396 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 P+ KQY S A MK ++P+I + EK K + + Q+ + LY +P AGC P LLQ Sbjct: 397 PVQYKQYTSQAKMKILKPEIAAISEKHKDNAMKK-QQETMALYSKAGASPAAGCLPALLQ 455 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 IPVF+A++ + ++R + W DL++ D I L +PFY HV ++PI+ Sbjct: 456 IPVFYALFTFFPSAFDLRGKS-FLWADDLSSYD--EIAKLPFEIPFYGD---HVSLFPIL 509 Query: 497 MSLSMFIQMKM---SPPPADKGQAMI----------LNWMPVVFVFALSSFPAGLIIYWS 543 ++++F M++ + Q + + + P++ + + + +GL +Y+ Sbjct: 510 AAVTIFFSMRLTTGNQQMQQPTQEGMPDMSKMMKYMMYFSPLLMLVFFNQYASGLSLYYF 569 Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLR 571 SN+++I VI E + ++ Sbjct: 570 ISNLLTIGIILVIKNFIIDEEKIKAKIE 597 >gi|301168599|emb|CBW28189.1| membrane protein OxaA [Bacteriovorax marinus SJ] Length = 488 Score = 246 bits (628), Expect = 8e-63, Method: Composition-based stats. Identities = 120/565 (21%), Positives = 227/565 (40%), Gaps = 84/565 (14%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIE--EMNNERKNIQTVKQPNQVDNSYAAVLID 59 + F+A+ LS ++++ WQ ++ + E N + Q V+ Sbjct: 3 DDQKRMFLAVVLSGLVLFGWQTYFAPKQKPIIEQNASEQINAKAAAKTQETTVKQEVVKP 62 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 S L N IN DL+++ + +S + + + Sbjct: 63 VTESVSSEVKSFTLTNNGHSVKINS------DLSIQDFSNPGAS----FDFFATTGVEKP 112 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 + E+ + ++ + + I G + + + + ++ T + + Y Sbjct: 113 FKIEIGNEARFSSFNFTFNQVSPSHIQGSNVKLAMNVDFKMDDLGKVTYKVTSA--KAYQ 170 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F++V T T + + +SL K D + Sbjct: 171 FRVVFTSTEREEENRQIRQF-----------------------SYYTQSLNHMKVGDSDD 207 Query: 240 SSISNFHESNSWLGISDKY--WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 WL I + +A F + ++ K G R + L Sbjct: 208 D-----DGKMRWLAIDFNFHLFAITF----KEPVAARLKAFESGEFR----------STL 248 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 + K + + + ++ ID+G+F I+ P+ + + ++ V Sbjct: 249 VNDVHNLEGSIVFSKKNYDLLAKLGD-----KLDLSIDFGFFGIISVPILRGLQFVHDYV 303 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+GIAI++ T+ ++ + FPL K + S M+ IQP++ +++EKFK P Q +QK ++ Sbjct: 304 PNYGIAIIILTILIRTIMFPLQYKSFKSMKKMQKIQPQLTKIKEKFKDDP-QRMQKETME 362 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 +K NPL GC P++ Q+P+FFA Y+V+ + E +PF+GWI DL+ DP + Sbjct: 363 AFKKAGANPLGGCLPLIAQMPIFFAFYQVLYNAEEFVGSPFFGWIADLSIKDPYYVL--- 419 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 P++M+L+M +Q +++P P AD Q I+ MP+VF F + PA Sbjct: 420 ----------------PVLMALAMALQTRLNPSPSADPTQKKIMMLMPIVFGFFMKDLPA 463 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHG 561 GL +Y S + + QQ ++ K+ Sbjct: 464 GLNLYIFTSTIYGVGQQLLVYKLTD 488 >gi|325270361|ref|ZP_08136966.1| inner membrane protein OxaA [Prevotella multiformis DSM 16608] gi|324987305|gb|EGC19283.1| inner membrane protein OxaA [Prevotella multiformis DSM 16608] Length = 642 Score = 246 bits (628), Expect = 9e-63, Method: Composition-based stats. Identities = 120/630 (19%), Positives = 234/630 (37%), Gaps = 78/630 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN--IQTVKQPNQVDNSYAAVLI 58 M+ N L ++++ + ++ P E++ +R +V + N+ A Sbjct: 1 MD--KNTIAGFVLIALVLFGF-AWWQQPSAEQVAQQRAEFVKDSVAAARKAQNAKLAAAK 57 Query: 59 DDR--------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------ 98 + + + LKN + ++N KG +R Y Sbjct: 58 QAQQKAAAAADTTALFHSALNGKGQDITLKNSKVELTLNTKGGVVSKAVIRNYVGHDIAV 117 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 D S + VTL S ++ + NIE + + + ++ T + L Sbjct: 118 KDGSKDRKDVTLFSGNDQSLNFM----LAGKNTNIETKDLVFIPSNVT------DTTVTL 167 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSI--------------DQIRFSPRGRIMR 204 L YL S ++ R RG Sbjct: 168 TAVAGPGRTLTLNYVLGRDYLLHASLQAEGMSGLFAPDCNQMDVSWQERCRQQERGFTFE 227 Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 ++ AT T+ G L + + E+ D W+ ++++++V I Sbjct: 228 NR--YATLTYRKHGGSTDYLSETAEKEETTEDAMD-----------WVAFKNQFFSAVMI 274 Query: 265 PSKETSFHSQFKYLS-DGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYE 322 + ++ K D + Y + A+ T P + + G +F + E Sbjct: 275 ARDNFAAGAKLKSTPLDKESHYLKHYEASMKTGFDPTGRRPSEFEFYFGPNDFRLLQSVE 334 Query: 323 KDLAIPR---FEMLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFP 377 K+ + + L+ GW F + + F L V G+ ++L T+ +KL+ +P Sbjct: 335 KESRFGKDLDMQRLVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITYP 394 Query: 378 LAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 + KK Y+S+A M+ ++PK+DE +F K Q+AM+Q Y + ++PL+GC P+L+Q Sbjct: 395 MVKKSYMSSAKMRVLKPKLDEATRQFNKPEDQMQKQQAMMQKYAEYGVSPLSGCLPMLIQ 454 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW--P 494 +P++ A++ + ++++R + W+ DL+ DP + L + Sbjct: 455 MPIWIAMFNFVPNAIQLRGQS-FLWMDDLSTYDPIISWGHNLWLVGDHLSLTCILFCGAN 513 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ S Q K Q ++ W MP+ F F + + +GL Y+ S S Sbjct: 514 LLYSWFTMQQQKDQMVGQQADQMKMMQWMMFAMPLFFFFMFNDYSSGLNFYYFVSLFFSA 573 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 + K E L+ L + + N+ Sbjct: 574 AIMWTLRKTTDDE-KLLRILEAKRKEKKNN 602 >gi|325857446|ref|ZP_08172501.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola CRIS 18C-A] gi|325483156|gb|EGC86136.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola CRIS 18C-A] Length = 642 Score = 246 bits (627), Expect = 1e-62, Method: Composition-based stats. Identities = 121/630 (19%), Positives = 233/630 (36%), Gaps = 78/630 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN--IQTVKQPNQVDNSYAAVLI 58 M+ N L ++++ + ++ P E++ +R +V + N+ A Sbjct: 1 MD--KNTITGFVLIALVLFGF-AWWQQPSAEQVAQQRAEFVKDSVAAARKAQNAKIAAAK 57 Query: 59 DDR--------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------ 98 + + + LKN + ++N KG ++ Y Sbjct: 58 QAQQKAAVAADTTALFHSALNGKGQDITLKNSKVELTLNTKGGVVSKAVIKNYVGHDIAV 117 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 D S + VTL S ++ + NIE + L+ T + L Sbjct: 118 KDGSKDRKDVTLFSGNDQSLNFM----LAGKNTNIETKD------LVFTPSNVTDTTVTL 167 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSI--------------DQIRFSPRGRIMR 204 L + YL S ++ R RG Sbjct: 168 TAVAGPGKTLTLNYVLGKDYLLHASLQAEGMSGLFAPDCNQMDVSWQERCRQQERGFTFE 227 Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 ++ AT T+ G L + + E+ D W+ ++++++V I Sbjct: 228 NR--YATLTYKKHGGSTDYLSETAEKEETTEDAMD-----------WVAFKNQFFSAVMI 274 Query: 265 PSKETSFHSQFKYLS-DGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYE 322 S ++ K D + Y + A+ T P + + G +F + E Sbjct: 275 ARDNFSAGAKLKSTPLDKESHYLKHYEASMKTGFDPTGRRPSEFEFYFGPNDFRLLQAVE 334 Query: 323 KDLAIPR---FEMLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFP 377 K+ + + L+ GW F + + F L V G+ ++L T+ +KL+ +P Sbjct: 335 KESRFGKDLDMQRLVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITYP 394 Query: 378 LAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 + KK Y+S+A M+ ++PK+DE +F K Q+AM+Q Y + ++PL+GC P+L+Q Sbjct: 395 MVKKSYMSSAKMRVLKPKLDEATRQFNKPEDQMQKQQAMMQKYAEYGVSPLSGCLPMLIQ 454 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW--P 494 +P++ A++ + ++++R + W+ DL+ DP + L + Sbjct: 455 MPIWIAMFNFVPNAIQLRGQS-FLWMDDLSTYDPIISWGHNLWLVGDHLSLTCILFCGAN 513 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ S Q K Q ++ W MP+ F F + + +GL Y+ S S Sbjct: 514 LLYSWFTMQQQKDQMVGQQADQMKMMQWMMFAMPLFFFFMFNDYSSGLNFYYFVSLFFSA 573 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 + K E L+ L + + N+ Sbjct: 574 AIMWTLRKTTNDE-KLLQILEAKRKEKKNN 602 >gi|110638943|ref|YP_679152.1| putative inner membrane protein translocase component YidC [Cytophaga hutchinsonii ATCC 33406] gi|123058652|sp|Q11S04|OXAA_CYTH3 RecName: Full=Inner membrane protein oxaA gi|110281624|gb|ABG59810.1| protein translocase subunit yidC [Cytophaga hutchinsonii ATCC 33406] Length = 620 Score = 246 bits (627), Expect = 1e-62, Method: Composition-based stats. Identities = 130/611 (21%), Positives = 244/611 (39%), Gaps = 64/611 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + I+L +++ + F E I Q + V AA Sbjct: 1 MD--KNQIIGISLISVLMLGYFGFMSTQTPETPVTTPPAITQPVQSDTVLLKSAATDTAL 58 Query: 61 RAQA-----------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 +AQ + + +L+N ++ +++ KG + L+ Y Sbjct: 59 KAQNQREYGDFAAAMVGEAKEYKLENKDVVVTLSTKGGTIKSVLLKNY-FTWDKKQLF-- 115 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 L N +L + N + + +++ + N E Sbjct: 116 LFKQENN------QLSLILNTNKKPV-DLYSLYYAGVESKAGDKQVVTFKTDAGNGKTIE 168 Query: 170 RTISLDEHYLFKIVDTVTNNSID------QIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 T +L F + + + R ++ R + + ++A Sbjct: 169 HTYTLGAAG-FTVDYNLKAAGFGGELPNLPLTLDWREQVERIEYDSEQARVKSTVNYMAA 227 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVF-------IPSKETSFHSQFK 276 + + D E ++SN + W+ + K++ S F IPS + + + Sbjct: 228 EDGFDYLSEASKDRETETLSNVY----WVSLKQKFFNSGFYIREGGTIPSATVTAYPMYS 283 Query: 277 YLSDGHARYQAKFSANEITIL----PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 L + + A E + S + G +F K + ++ Sbjct: 284 TLPNAPVNSEKFIKALEAQVQLPLEAVISGKAAYAFYFGPNDFKIC----KAVPAENYQK 339 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 ++ GW F+++ F L G +FG+ I++ + +KL+ PL+ K +VS A M Sbjct: 340 NVNLGWPLVSWINRFVVIPVFDGLKGVFSSFGLIIVILVLLIKLVLLPLSYKSFVSMAKM 399 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K ++P++DEL+ K Q +Q +Q+YK INPL+GC P+LLQ+P+ A++ Sbjct: 400 KALKPELDELKAKHGDD-QQAIQMEQMQVYKQFGINPLSGCIPVLLQMPILLAMFNFFPN 458 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQMKMS 508 ++++R W W DL++ D F LPF +P + HV ++ ++M++S ++ Sbjct: 459 AIDLRGESLW-WATDLSSYDE------FAKLPFTIPFYGSHVSMFTLLMTISTLAYTWVN 511 Query: 509 PPPADKG--QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + + MPVVF+F L+SFPAGL Y+ SN+++I QQ +I + E L Sbjct: 512 NQVSTVTGPMKYMSYAMPVVFLFVLNSFPAGLSFYYFVSNLVTIAQQLIIRRFVD-EGQL 570 Query: 567 IDRLRSTFSKN 577 +L + KN Sbjct: 571 RLQLEAKRDKN 581 >gi|300772349|ref|ZP_07082219.1| membrane protein OxaA [Sphingobacterium spiritivorum ATCC 33861] gi|300760652|gb|EFK57478.1| membrane protein OxaA [Sphingobacterium spiritivorum ATCC 33861] Length = 607 Score = 246 bits (627), Expect = 1e-62, Method: Composition-based stats. Identities = 114/624 (18%), Positives = 242/624 (38%), Gaps = 83/624 (13%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-----PNQVDNSYAA 55 M+ N + + L I+ + + P E+ E++ ++K+ P D + Sbjct: 1 MD--RNTLIGLILIFAILGG-SFYLMKPSESEIKQEQRLQDSLKRVKEGLPPVADTTKNP 57 Query: 56 VLIDDRAQALSMSPR--------------VELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 + + + L+N +I I KG + + L+ Sbjct: 58 AKTAVNTNQVDSAELKKPFGAAKYGEEKIITLQNEKIIAKITSKGGRVKSVELKN--EKN 115 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 SP++ +N F + NN+ ++ ++ G + T +L + Sbjct: 116 FDGSPLILFDGNNNRFGLMFNAAGQNISTNNLNFQTTDADVSVSKGD--SKTVKFRLSYN 173 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 +A I + T+ D++ N +D + I + + + G + Sbjct: 174 DAQYIEYTYTLKGDDY----------NLGLDVNAVGLQNLIPQDQKTILLD-----WGAV 218 Query: 222 AVLGDKSLVEQK-----YSDIEKSSISNFHESNS----------WLGISDKYWASVFIPS 266 +K++ ++ Y ++++ + ES W+ Y++S+ Sbjct: 219 LYQKEKNIKGERDKSSIYYKTAENNVDHLKESGDDDDQLDKRLTWIAFKQHYFSSILTSK 278 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + + + ++ K + F G ++ + Sbjct: 279 TGFASADLDVKTAAEADIVKLYSAKAKLDFSNQKDNQYSFNFFFGPNKYNILKAQNDGSN 338 Query: 327 IPRFEMLIDWGWFY------FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 +I+ GW +I P+F + F+ ++GI I++ T+ +K + FPL Sbjct: 339 -----SIINMGWGPMRWINQWITVPVFNFLDGFH---MSYGIVILILTILLKGVLFPLTY 390 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 K Y S A M+ ++P++DE++ K + +LQ+ ++LYK +NPL GC P++LQ+P Sbjct: 391 KSYQSMAKMRVLKPQLDEIKAKVGEDNAVLLQQEQMKLYKQAGVNPLGGCLPLVLQMPFT 450 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAAD-PTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 A + E+R + W+KDL+ D P +FGI HV + ++M+L Sbjct: 451 IAFFYFFPNLFELRGES-FLWVKDLSTYDSPITFPAIFGID--------HVSLMCVLMTL 501 Query: 500 SMFIQMKMSPPPADK--GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + + + I +MP++F F L+SFPAGL Y+ V + + Q +I Sbjct: 502 TTLLTTWYNNATSGATGQMKYIGYFMPLIFFFVLNSFPAGLNYYYFLGAVFTFLTQLLI- 560 Query: 558 KMHGAEIGLIDRLRSTFSKNYNSQ 581 + + ++ ++ + + + Sbjct: 561 RSFVDDDKILAKIEENKKRPESEK 584 >gi|332668063|ref|YP_004450851.1| membrane protein oxaA [Haliscomenobacter hydrossis DSM 1100] gi|332336877|gb|AEE53978.1| Membrane protein oxaA [Haliscomenobacter hydrossis DSM 1100] Length = 634 Score = 246 bits (627), Expect = 1e-62, Method: Composition-based stats. Identities = 121/626 (19%), Positives = 227/626 (36%), Gaps = 70/626 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN------------IQTVKQPNQ 48 M+RN + IAL I+ AWQ F + + +R + VK+ Sbjct: 1 MDRNN--IIGIALIFILFLAWQYFLAPSKTQIAAQQRAQDSIARVERLRDSLAIVKKQEA 58 Query: 49 VDNSYAAVLIDDRA--------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 + AA + D A+ L+N + + + KG + D+ + Sbjct: 59 REKIKAAAEVPDSVRTQMLGGQYGPFANAAVGKEETTVLENDLIKVTFSNKGGKIQDVLV 118 Query: 95 RGY------HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK 148 + Y P+ L N + N +L + Sbjct: 119 KKYFKMVQGEDRKDRKIPLHLLDDVKNRFEYTLPVKGLRNGVNTADLYF----------E 168 Query: 149 ILTPTTPIKLVFKNANNILFERTISLDEHYL-------FKIVDTVTNNSIDQIRF--SPR 199 + + N F +T SL + F+ +D V S I Sbjct: 169 VNNTGNSVTFRADAGNGQYFAQTYSLPSNTYKLDYRLEFEGMDQVFEASAKNITLKWVNY 228 Query: 200 GRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYW 259 + Q + I + ++YS+ + W+ +++++ Sbjct: 229 LDKIEKATQYERQYSSLNFKAIDENSGRCSPTREYSEKDAEG-----APIQWVANTNQFF 283 Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT-TTNFLFAGAKEFPTI 318 S + K + + + G+S + G EF + Sbjct: 284 NSSLLSEKGFTSAKMASKNLPEENEDLKELKSEIQVPFKGESSEQFAMHFYIGPNEFDRL 343 Query: 319 HHYEKDLA-IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 H L+ + F I ++ +P+F +++ L+ + GI I++ T VKLL FP Sbjct: 344 HKMGYSLSDVVPFGQNIMGTINRWVIRPLFSFLTW---LISSKGIVILMLTFMVKLLLFP 400 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 L + S + M ++P+I+ L+E++ Q +Q + +Y+ +NPL C+P+LLQ+ Sbjct: 401 LTYRMIYSQSKMTALKPEIERLKERYGDD-QQKVQMETMSMYREFGVNPLGACFPMLLQL 459 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPI 495 P++FA+Y+ S+E R A + W DL++ D F L +PF + + W + Sbjct: 460 PIWFALYRFFPASIEFRQAS-FLWATDLSSYD--EFFQLPFNIPFGFGEHISLFALLWVL 516 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 L + K A+ + MPV+F+ +S +GL Y +SN+++I Q Sbjct: 517 STLLYTWYNSKNMDFSANPSMLYMQYIMPVLFMGFFNSSASGLSAYMLFSNLLNIGQTLA 576 Query: 556 IMKMHGAEIGLIDRLRSTFSKNYNSQ 581 E L ++ + K + Sbjct: 577 TKYFLIDEKKLKLKMD-DYRKKPKKK 601 >gi|327314137|ref|YP_004329574.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola F0289] gi|326944441|gb|AEA20326.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola F0289] Length = 642 Score = 245 bits (626), Expect = 1e-62, Method: Composition-based stats. Identities = 120/630 (19%), Positives = 232/630 (36%), Gaps = 78/630 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN--IQTVKQPNQVDNSYAAVLI 58 M+ N L ++++ + ++ P E++ +R +V + N+ A Sbjct: 1 MD--KNTITGFVLIALVLFGF-AWWQQPSAEQVAQQRAEFVKDSVAAARKAQNAKLAAAK 57 Query: 59 DDR--------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------ 98 + + + LKN + ++N KG ++ Y Sbjct: 58 QAQQKAAVAADTTALFHSALNGKGQDITLKNSKVELTLNTKGGVVSKAVIKNYVGHDMAV 117 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 D S + VTL S ++ + NIE + L+ T + L Sbjct: 118 KDGSKDRKDVTLFSGNDQSLNFM----LAGKNTNIETKD------LVFTPSNVTDTTVTL 167 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSI--------------DQIRFSPRGRIMR 204 L + YL S ++ R RG Sbjct: 168 TAVAGPGKTLTLNYVLGKDYLLHASLQAEGMSGLFAPDCNQMDVSWQERCRQQERGFTFE 227 Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 ++ AT T+ G L + + E+ D W+ ++++++V I Sbjct: 228 NR--YATLTYKKHGGSTDYLSETAEKEETTEDAMD-----------WVAFKNQFFSAVMI 274 Query: 265 PSKETSFHSQFKYLS-DGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYE 322 + ++ K D + Y + A+ T P + + G +F + E Sbjct: 275 ARDNFAAGAKLKSTPLDKESHYLKHYEASMKTGFDPTGRHPSEFEFYFGPNDFRLLQAVE 334 Query: 323 KDLAIPR---FEMLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFP 377 K+ + + L+ GW F + + F L V G+ ++L T+ +KL+ +P Sbjct: 335 KESRFGKDLDMQRLVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITYP 394 Query: 378 LAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 + KK Y+S+A M+ ++PK+DE +F K Q+AM+Q Y + ++PL+GC P+L+Q Sbjct: 395 MVKKSYMSSAKMRVLKPKLDEATRQFNKPEDQMQKQQAMMQKYAEYGVSPLSGCLPMLIQ 454 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW--P 494 +P++ A++ + ++++R + W+ DL+ DP + L + Sbjct: 455 MPIWIAMFNFVPNAIQLRGQS-FLWMDDLSTYDPIISWGHNLWLVGDHLSLTCILFCGAN 513 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ S Q K Q ++ W MP+ F F + + +GL Y+ S S Sbjct: 514 LLYSWFTMQQQKDQMVGQQADQMKMMQWMMFAMPLFFFFMFNDYSSGLNFYYFVSLFFSA 573 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 + K E L+ L + N+ Sbjct: 574 AIMWTLRKTTNDE-KLLQILEEKRKEKKNN 602 >gi|332521156|ref|ZP_08397614.1| membrane protein insertase, YidC/Oxa1 family [Lacinutrix algicola 5H-3-7-4] gi|332043249|gb|EGI79446.1| membrane protein insertase, YidC/Oxa1 family [Lacinutrix algicola 5H-3-7-4] Length = 634 Score = 245 bits (625), Expect = 2e-62, Method: Composition-based stats. Identities = 108/539 (20%), Positives = 219/539 (40%), Gaps = 48/539 (8%) Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD 125 + + N L + KG ++ L + V +S + L+ N A + Sbjct: 94 AQDGETVVDNGVLQLKFSNKGGHLAEVKLNKF---VDYDSLPIYLVKDKN------ASFN 144 Query: 126 YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVD 184 + + N+ ++ + T + + K + E + + Y+ Sbjct: 145 INFGTTDSRILNTQDLYFQPTKTKNGENTIVSMKLKVSETKFLEYKYIIKPNDYMIDFTI 204 Query: 185 TVTN-----NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 NS ++ + RH + ++ + + D K + + Sbjct: 205 QSQGLSSEINSSQEVNLKWEQKAYRH---DESISYENRYTRLTYQHDDG----KIDKLSQ 257 Query: 240 SSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYL----SDGHARYQAKFSANEI 294 + E + W+ +++S+ K+ + + + +FSA Sbjct: 258 GGEDDDVEEDMDWMSFRQHFFSSILTTDKQFKSVALTSKDLVEDEEIDTVFTKQFSAKTA 317 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 L G I + L+ G + + +Y+K+L + WG F +I K +F+ + F Sbjct: 318 LALNGNEINESLGLYYGPTDSKILKNYDKNLEES---IPFGWGIFGWINKYLFVPLFSFL 374 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + +GIAI++ TV +KL + KQY+S MK ++P++D +REK K + + Q+ Sbjct: 375 SSFLPYGIAIIVMTVLIKLSMSFVQYKQYLSQMKMKILKPELDAIREKHKDNKMKA-QQE 433 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 + L +PLAGC P L+Q+PVF+A++ + +R + W DL++ D F Sbjct: 434 TMALQNKAGASPLAGCLPALIQMPVFYALFMFFPTAFALRQ-KKFLWADDLSSFDSIYKF 492 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-------------PPPADKGQAMILN 521 +PFY H+ ++PI+ +++F MK++ P K ++ Sbjct: 493 PDGFSIPFYGD---HISLFPILAGIAIFFYMKLTTGQQQMSAPQQEGMPDMAKMMKYMIY 549 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 + P++ + +S+ +GL +Y+ SN+ISI VI E ++ +++ +K Sbjct: 550 FAPIMMIIFFNSYASGLSLYYFISNLISIGILLVIKNFILDEEKILAGIQANKAKPKKE 608 >gi|296121961|ref|YP_003629739.1| 60 kDa inner membrane insertion protein [Planctomyces limnophilus DSM 3776] gi|296014301|gb|ADG67540.1| 60 kDa inner membrane insertion protein [Planctomyces limnophilus DSM 3776] Length = 699 Score = 244 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 157/665 (23%), Positives = 259/665 (38%), Gaps = 128/665 (19%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY------PRIEEMNNERKNIQTV--KQPNQVDNS 52 ME+ + IALS ++++ W F + P+ E++ + Q +P ++ + Sbjct: 1 MEQ-RRFLTFIALSALVIFGWSGFVMPMLFPPPPKAEKLAEKAPEDQAADIAKPEELQPA 59 Query: 53 YAAVLID-------DRAQALSMSPRVELKNPSLI---------------------GSINL 84 A V + D Q + + ++ P L +N Sbjct: 60 DALVPANVIAKAGADANQPEAPAQEKVVEPPKLQSFPNRQILLGSTNPDEPFFLAVKLNS 119 Query: 85 KGAQFDDLNLRG--YHLDVSSNSPIVT-----LLSPSNTK------NAYFAELDYVSTAN 131 +G + + L Y S+ P+ LL T + A L Sbjct: 120 RGGSIETIELNDPRYRSLDDSSKPVKVVGDDPLLKLKTTDVTIEAIDRQLAALGL----- 174 Query: 132 NIELPNSNTVWNLISGKILTPTTPIKLVFKNANN-ILFERTI------------------ 172 + W ++ G + F + + I E+ Sbjct: 175 ----SLAKIDWEVVPGSESPEG--VTFRFTSPDGSIQLEKAYRLPKVPGLAGKEPTKTER 228 Query: 173 -SLDEHYLFKIVDTVTNNSIDQIRFSPRGR----IMRHKPQTATNTFGVQEGFIAVLGDK 227 +L + YL TV N + + + + P+ T V+ GF VL D Sbjct: 229 DNLGQGYLLDYSLTVRNLTENPREVRYTMQGPVGVPLENPENVTKYRDVRVGF--VLPDG 286 Query: 228 SLVEQKYSDIEK-------SSISNFHESNSWLGISDKYWASVFIPSKET-------SFHS 273 VE + + S + ++G+ Y+AS+ P + S S Sbjct: 287 ESVESSHQSATEVLDAESSGKPSVWTRPIEYVGVDATYFASLVHPVENQIKERTIESVQS 346 Query: 274 QFKYLSDGHARYQAKFSANEITIL-------PGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 Q Y + + I P T L+AG K + A Sbjct: 347 QVTYPAQEKHFSDVSIELTSVPIQLAPQGTGPNAEATHHFQLYAGPKRAHLMAAVG---A 403 Query: 327 IPRFEMLIDWGWFYFI-------AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 E I W F+F+ PM L++ + L N+GIAI+L T+ V+ PL Sbjct: 404 ADVTEYHIGWNPFFFLEPLVRLLVIPMLALLNGLHALGINYGIAIILLTIIVRTCLMPLT 463 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 +KQ S MK +QPK+ EL++KF L++A ++LY H NPLAGCWP+LLQ+P+ Sbjct: 464 RKQAQSAQRMKEMQPKLKELQKKFAGDAD-GLRRAQLELYSKHGFNPLAGCWPVLLQMPI 522 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 FFA+Y+ +S+S+++R A + WI +LAA D +F L +PF G+ + PI+ + Sbjct: 523 FFALYRALSVSVDLRRAS-FLWIDNLAAPD--ALFELPFRVPFL--GWTEFNLLPILTII 577 Query: 500 SMFIQMK-MSPPPADKGQAMILN---WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 Q K + PPPAD+ QAM M V+ PAGL IY+ S++ + ++ Sbjct: 578 LFVAQQKILMPPPADEEQAMQYRMMNIMMVMMGVMFYRVPAGLCIYFITSSLWGMAERWF 637 Query: 556 IMKMH 560 +M+ Sbjct: 638 FDRMN 642 >gi|126643002|ref|YP_001085986.1| inner membrane protein (IMP) integration factor [Acinetobacter baumannii ATCC 17978] gi|126388886|gb|ABO13384.1| Inner membrane protein (IMP) integration factor [Acinetobacter baumannii ATCC 17978] Length = 366 Score = 244 bits (624), Expect = 3e-62, Method: Composition-based stats. Identities = 73/371 (19%), Positives = 139/371 (37%), Gaps = 36/371 (9%) Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + V + A A A + ++ IN KG + L + SN Sbjct: 2 ASDVPQANIAQSQTTDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQ 61 Query: 106 PIVTLLSPSNTKNAYFAELDYVS-------TANNIELPNSNTVWNLISGKILTPT----- 153 P V L ++ K Y A+ + T + L K + Sbjct: 62 PFVML--ENDAKRTYVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSE 119 Query: 154 --TPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT- 209 + +VFK + +T + + Y + V N S + G++ R + Sbjct: 120 KVLTVPMVFKTPEGVEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDP 179 Query: 210 -----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 T G G D + K+++ + + N W+ + Y+ S +I Sbjct: 180 GKSSQGIFTLGTFLGGAWGTPDAHYNKLKFANFSEEKL-NTEAKGGWVAMVQHYFVSAWI 238 Query: 265 P-------SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317 P + + ++ + F++ I + G S+ L++G K Sbjct: 239 PGNLKLTQANGQPYVAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSE 298 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + KDLA+ +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +P Sbjct: 299 L----KDLAV-GLNQTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWP 353 Query: 378 LAKKQYVSTAN 388 L++K V Sbjct: 354 LSQKVIVLWRK 364 >gi|302346738|ref|YP_003815036.1| membrane protein insertase, YidC/Oxa1 family [Prevotella melaninogenica ATCC 25845] gi|302150409|gb|ADK96670.1| membrane protein insertase, YidC/Oxa1 family [Prevotella melaninogenica ATCC 25845] Length = 643 Score = 243 bits (621), Expect = 5e-62, Method: Composition-based stats. Identities = 122/632 (19%), Positives = 241/632 (38%), Gaps = 82/632 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-----------RKNIQTVKQPNQV 49 M+ L +I++ + ++ P E++ + K QT K + Sbjct: 1 MD--KRTITGFVLIALILFGF-AWWQQPSAEQVAQQRAEFVKDSIASAKKAQTAKLAAEK 57 Query: 50 DNSYAAVLIDDR-----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY------H 98 A D A + + LKN + +++ KG ++ Y Sbjct: 58 QAQQKAAQATDTTALFYAALNGKAQDIILKNSKVELTLSTKGGVVKKAVIKNYIGHNIAV 117 Query: 99 LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 D S + VTL S + + A+ + T + I P++ T + + Sbjct: 118 KDGSQDQKNVTLFSGDDQSLNFMLAAKNSNIETKDLIFTPSNVT------------DSTV 165 Query: 157 KLVFKNANNILFERTISLDEHYLFKIV--------------DTVTNNSIDQIRFSPRGRI 202 L +L + YL + + + N ++ + RG Sbjct: 166 TLTAVAGEGKTLTLNYTLGKDYLLNMSLQAEGMGGLFAPNYNQIDINWQERCKQQERGFT 225 Query: 203 MRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASV 262 ++ AT T+ +G L + S E+ D S W+ ++++++V Sbjct: 226 FENR--YATLTYKKHDGGTDYLSETSEKEETTED-----------SMDWVAFKNQFFSAV 272 Query: 263 FIPSKETSFHSQFKYLS-DGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHH 320 I + ++ K + + Y + AN P + + G +F + Sbjct: 273 MIAKDNFATGAKLKSTPLEKSSHYLKHYEANMKAGFDPTGKRPSEFEFYFGPNDFRLLQS 332 Query: 321 YEKDLAIPR---FEMLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLF 375 E + + E L+ GW F + + F L V G+ ++L T+ +KL+ Sbjct: 333 VETESKFAKELDMERLVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLIT 392 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 FP+ KK Y+S+A M+ ++PK+DE ++F K Q+AM+Q Y + ++PL+GC P+L Sbjct: 393 FPMVKKSYMSSAKMRVLKPKLDEATKQFNKPEDQMQKQQAMMQKYSEYGVSPLSGCLPML 452 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW- 493 +Q+P++ A++ + ++++R + W+ DL+ DP ++ L + Sbjct: 453 IQMPIWIAMFNFVPNAIQLRGQS-FLWMHDLSTFDPIFSWSHDVWLVGDHISLTCILFCG 511 Query: 494 -PIIMSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVI 548 ++ + Q K Q ++ WM P+ F F + + +GL Y+ S Sbjct: 512 ANLLYTWFTMQQQKDQMVGQQADQMKMMQWMMFGMPLFFFFMFNDYSSGLNFYYFISLFF 571 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 S + K E L+ L + + N+ Sbjct: 572 SAAIMWALRKTTNEE-KLLAILEARREERKNN 602 >gi|108761211|ref|YP_635612.1| inner membrane protein, 60 kDa [Myxococcus xanthus DK 1622] gi|108465091|gb|ABF90276.1| inner membrane protein, 60 kDa [Myxococcus xanthus DK 1622] Length = 603 Score = 243 bits (621), Expect = 6e-62, Method: Composition-based stats. Identities = 120/565 (21%), Positives = 205/565 (36%), Gaps = 79/565 (13%) Query: 36 ERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 P + +VEL+ + + +GA L+ Sbjct: 52 ATAPADAGTPPAVQPPEGGTGTGATAEAPPPPARKVELQRDEATYAFSSEGAGLTAAVLK 111 Query: 96 GYH----LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151 G +++ L ++ P L Sbjct: 112 GAKMREQQELTVTQGFQKLFGKEIPPAPQM----------DLARPTPGQPLPLAVSITGA 161 Query: 152 PTTPIKLVFK-------NANNILFE---------RTISLD-EHYLFKIVDTVTNNSIDQI 194 P L + NA+ + F +T+ + + V N S Sbjct: 162 SPLPADLNYTLDEGAPGNADGVTFTGRRGPWEVVKTVKWPMDGFELSYTLQVRNTSGQPQ 221 Query: 195 RFSPRGRIMRHKPQTATNTFGVQEGFIAVLG--------DKSLVEQKYSDIEKSSISNFH 246 + + H N F V L + D + + Sbjct: 222 SGELQ---VHHNRAIDPNFEHAPSFFGGVGNLSRSACWVGDKLQKMSPGD-DHPDAEDTR 277 Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTN 306 + GI +Y+ S P + S + + A F IT PG+++T Sbjct: 278 GQIQFFGIDQQYFLSALYPLEGPRAGSCSFEATPTLRKVTASF---PITAAPGETVTLRF 334 Query: 307 FLFAGAKEFPTIHHYE-----------KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G K+ + P +D+G + I K + +M +FY Sbjct: 335 GGYFGPKDTDLLAQVPGASLRAATGQTDATFHPPLAETVDFGIWAVICKVLLWVMKFFYG 394 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 + GN+G+AI+L TV VKL+ PL + VS +K +QP+++E+R+K + Q + Sbjct: 395 VTGNWGVAIILLTVVVKLVLLPLTYRSMVSMEEVKKLQPRMEEIRKKHADNREQ-QNLEI 453 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI-KDLAAADPTNIF 474 ++LY+ +NPL GC P+L+Q+PV+ A++ + S ++ PF G I +DL DPT + Sbjct: 454 MKLYQEAKVNPLGGCLPLLIQMPVWIALFTALRNSFDIYGEPFIGPIWRDLTYKDPTYLL 513 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSS 533 P+ + +SM I KM P D QA I+ W +P++F L Sbjct: 514 -------------------PLALGVSMVITQKMQPQMMDATQAKIMTWFLPIIFTLTLLQ 554 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 +PAGL +Y +N++SI QQ + K Sbjct: 555 YPAGLSLYIFTNNILSIAQQYGLRK 579 >gi|221218111|ref|ZP_03589577.1| inner membrane protein OxaA [Borrelia burgdorferi 72a] gi|225548690|ref|ZP_03769737.1| inner membrane protein OxaA [Borrelia burgdorferi 94a] gi|221192059|gb|EEE18280.1| inner membrane protein OxaA [Borrelia burgdorferi 72a] gi|225370720|gb|EEH00156.1| inner membrane protein OxaA [Borrelia burgdorferi 94a] Length = 544 Score = 243 bits (621), Expect = 6e-62, Method: Composition-based stats. Identities = 128/576 (22%), Positives = 240/576 (41%), Gaps = 50/576 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQ--NFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M ++ + LS+ ++ + N I K +Q + DN ++V Sbjct: 1 MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKPSDKEVQFDLNKSFDDNEMSSVKS 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + S + ++ + + + L L+ + + + ++ + + T Sbjct: 61 NSF-NLIDKSQDIVVETGIYVATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNET-- 117 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DE 176 F ++ + +++ L +N N + + + + Sbjct: 118 --FFDISFDYFVDDLFLYKKIDDFNHEFKAYFK---------NNGKTYEYVKKYTFSKKD 166 Query: 177 HYLFKIVDTVTNNSIDQIR-FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 YL + TV + F I + + ++ +Q + L + K Sbjct: 167 EYLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQ--YNNYLSQIIYYDNKLK 224 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 + N W+G S KY+ + + + +FK + N+ Sbjct: 225 YGKDGLRINNPR---WIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIINNVRNKKN 278 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFML 349 I + F++AG K+ + ++K L F M ++ ++Y I PM M+ Sbjct: 279 I------SDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDNFFGMSVEKSFWYLIQVPMQMV 332 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + Sbjct: 333 MQVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDP-K 391 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAA 468 L + M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ Sbjct: 392 KLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIG 451 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADKGQAMILNWMP 524 D F Y + + I P IM + + M Q + MP Sbjct: 452 DSVYHFGY----KLYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMP 507 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++F F L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 508 IMFFFILYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|149197354|ref|ZP_01874405.1| hypothetical protein LNTAR_00195 [Lentisphaera araneosa HTCC2155] gi|149139372|gb|EDM27774.1| hypothetical protein LNTAR_00195 [Lentisphaera araneosa HTCC2155] Length = 614 Score = 243 bits (620), Expect = 6e-62, Method: Composition-based stats. Identities = 122/627 (19%), Positives = 237/627 (37%), Gaps = 96/627 (15%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 + + LS+ ++ +N + + + + + + + + ++ Sbjct: 9 LIILGLSLYLILNTENDKINQKFFGIEPQAAAPVEENTDTALSSDVVSPTSTTNEKTIAE 68 Query: 68 SPRVELKNPS---LIGSINLK------------------GAQFDDLNLRGYHLDVSSNSP 106 + K L +N + G D L Y + + Sbjct: 69 PKQEIAKTEIKEELPKELNTELPLHTLSVGENFTLNIRPGQGLKDAQLNEYFTTSAKDQN 128 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 + + NT + F+ I+L S L + Sbjct: 129 VK--IGDKNTPS--FSLSGVAEKWELIDL-----RVKEKSNDKLITEAAYTF---EGQSF 176 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE----GFIA 222 + T L+E Y F + + N S + S + G G Sbjct: 177 AVQSTWELEEDYHFALNHKLINTSDKTLNVSGLYLNCGYIQPIQMGEHGFFTQQAIGNDQ 236 Query: 223 VLGDKSLVEQKYS---------DIEKS-------------------SISNFHESNSWLGI 254 + E+K DI+ + ++S W+ + Sbjct: 237 AIDTILKKERKIETHIKTSIDGDIQDKVEEAQDQGRVLKDPFMVYSPDPDDNDSYDWIAV 296 Query: 255 SDKYWASVFIPSKETSFHSQFKYLSD----------GHARYQAKFSANEIT---ILPGKS 301 ++Y+ FI SF + + +Y F+ +I+ + PG S Sbjct: 297 KNQYF--AFIADTTDSFATVRTKTKEIISPTKNEDGSQDKYDLLFAEGQISDFDLAPGAS 354 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDL-AIPRFEMLIDW--GWFYFIAKPMFMLMSYFYNLVG 358 ++AG +E + + D I + M ++ W F+++ + + +F V Sbjct: 355 KEIVLDIYAGPQEIHVLENLGNDKKGIMQLNMFMNMKVSWLGFLSEMILKALFFFNGFVN 414 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 +FG+AI+L T+ VKLLF+ L K S M + P+I E+RE+ K +P QV+ + ++ L Sbjct: 415 SFGLAIILLTISVKLLFWRLTNKSNKSMKKMAVLGPRIKEIREENKDNP-QVMNQKVMAL 473 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y+ +NP GC P+LLQ+P+F A++ + ++E+RH + WI DL+ D G Sbjct: 474 YREEGVNPAGGCLPMLLQMPIFIALFNALRSAIELRHV-EFLWITDLSQPDT------LG 526 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 +P + + II +L M +Q KM+P AD+ Q ++ +MP++ +F PAGL Sbjct: 527 FIP-----GVPIRPLVIIWALLMLVQQKMTPSSADETQKKVMMFMPIMMLFFCYGMPAGL 581 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIG 565 +YW + ++++++Q + + Sbjct: 582 TLYWCFQSLMTLIQYKLNNRTTDGTPA 608 >gi|307565938|ref|ZP_07628397.1| membrane protein insertase, YidC/Oxa1 family [Prevotella amnii CRIS 21A-A] gi|307345366|gb|EFN90744.1| membrane protein insertase, YidC/Oxa1 family [Prevotella amnii CRIS 21A-A] Length = 641 Score = 242 bits (619), Expect = 8e-62, Method: Composition-based stats. Identities = 128/616 (20%), Positives = 247/616 (40%), Gaps = 77/616 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN-----IQTVKQPNQVDNSYAA 55 M+ N L ++++ + ++ P E++ +RK I T K+ + Sbjct: 1 MD--KNTITGFVLMALVLFGF-AWWQQPSKEQIAQQRKQFVADSIATAKKAQKDKEDSFK 57 Query: 56 VLIDDRAQALSMS-----------PRVELKNPSLIGSINLKGAQFDDLNLRGYH------ 98 +A AL + + LKN ++ +++ KG ++ Y Sbjct: 58 AEQVKQAVALDTTKLFYEALKGKKQDIVLKNNNVALTLSSKGGVVTKAIIKNYVGHNIAV 117 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 D S + P VTL SN ++ FA + ANNIE + + + Sbjct: 118 KDGSKDLPYVTLFD-SNDQSLNFA---LAAKANNIETKDLYFTPTNQTDST------VTF 167 Query: 159 VFKNANNILFERTISLDEHYLFKIV---------DTVTNN-----SIDQIRFSPRGRIMR 204 A T L + YL + + TNN +D++R RG Sbjct: 168 TANAAQGKSLTLTYKLGKDYLLHLSVKAQGVEGLFSPTNNQMEVEWLDKVRQQERGFSFE 227 Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 ++ AT T+ EG + L + + E+ W+ ++++++V I Sbjct: 228 NR--YATLTYKKSEGGTSYLSEGA-----------EKEETTEETTDWVAFKNQFFSAVMI 274 Query: 265 PSKETSFHSQFKYL-SDGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYE 322 S ++ K + D + Y ++ AN T P + + G +F + E Sbjct: 275 SKDNFSSGAKLKSVPQDKSSGYLKQYEANMKTAFDPSGKKPSEFEFYFGPNDFRKLQAVE 334 Query: 323 KDLAIPR---FEMLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFP 377 + + + L+ GW F + + F L + GI ++L T+ +K + +P Sbjct: 335 AESTFGKNLEMQRLVYLGWPLFRIINRWFTIYVFDFLSKLFPMGIVLILITLLLKAITYP 394 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQ 436 + KK Y+S+A M+ ++PK+DE +++ Q+ Q+AM+Q+Y + ++PL+GC P+L+Q Sbjct: 395 MVKKSYMSSAKMRVLKPKLDEATKQYNGKEDQMKKQQAMMQMYSEYGVSPLSGCLPMLIQ 454 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP-- 494 P++ A++ + ++++R + W+KDL+ DP + L + Sbjct: 455 APIWIAMFNFVPNAIQLRGES-FLWMKDLSTYDPIVEWGHNVWLIGDHISLTCILFCAAN 513 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ S Q K + Q ++ + MP+ F F + + +GL Y+ S S Sbjct: 514 LLYSWFTMQQQKDQMVGSQGDQMKMMQYMMLFMPLFFFFVFNDYSSGLNFYYFVSLFFSA 573 Query: 551 VQQAVIMKMHGAEIGL 566 + K E L Sbjct: 574 AIMWALRKTTNEEKLL 589 >gi|288802342|ref|ZP_06407782.1| inner membrane protein OxaA [Prevotella melaninogenica D18] gi|288335309|gb|EFC73744.1| inner membrane protein OxaA [Prevotella melaninogenica D18] Length = 643 Score = 242 bits (619), Expect = 8e-62, Method: Composition-based stats. Identities = 121/620 (19%), Positives = 239/620 (38%), Gaps = 58/620 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-----------RKNIQTVKQPNQV 49 M+ L +I++ + ++ P E++ + K QT K + Sbjct: 1 MD--KRTITGFVLIALILFGF-AWWQQPSAEQVAQQRAEFVKDSIAAAKKTQTAKLAAEK 57 Query: 50 DNSYAAVLIDDR-----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY------H 98 A D + + + LKN + +++ KG ++ Y Sbjct: 58 QAQQKAAQATDTTALFYSALSGKAQDITLKNSKVELTLSTKGGVVKKAVIKNYIGHNIAV 117 Query: 99 LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 D S + VTL S + + A+ + T + I P++ T + + + Sbjct: 118 KDGSQDQKNVTLFSGDDQSLNFMLAAKNSNIETKDLIFTPSNVTDSTVTFTAVAGKGKTL 177 Query: 157 KLVFKNANNILFERTISLDE-HYLFKIVD-TVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 L + + L ++ + LF + N D+ R RG ++ AT T+ Sbjct: 178 TLSYTLGKDYLLNMSLQAEGMGGLFAPNYNQLDINWQDRCRQQERGFTFENR--YATLTY 235 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 +G L + S E W+ ++++++V I + ++ Sbjct: 236 KKHDGGTNYLSETSEK-----------EETTEEPMDWVAFKNQFFSAVMIAKDNFATGAK 284 Query: 275 FKYLS-DGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR--- 329 K + + Y + AN P + + G +F + E + + Sbjct: 285 LKSTPLEKSSHYLKHYEANMKAGFDPTGKRPSEFEFYFGPNDFRLLQSVETESKFAKELD 344 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 E L+ GW F + + F L V G+ ++L T+ +KL+ FP+ KK Y+S+A Sbjct: 345 MERLVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITFPMVKKSYMSSA 404 Query: 388 NMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++PK+DE ++F K Q+AM+Q Y + ++PL+GC P+L+Q+P++ A++ Sbjct: 405 KMRVLKPKLDEATKQFNKPEDQMQKQQAMMQKYSEYGVSPLSGCLPMLIQMPIWIAMFNF 464 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW--PIIMSLSMFIQ 504 + ++++R + W+ DL+ DP + L + ++ + Q Sbjct: 465 VPNAIQLRGQS-FLWMHDLSTFDPIFSWNHDVWLVGDHISLTCILFCGANLLYTWFTMQQ 523 Query: 505 MKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 K Q ++ WM P+ F F + + +GL Y+ S S + K Sbjct: 524 QKDQMVGQQADQMKMMQWMMFGMPLFFFFMFNDYSSGLNFYYFISLFFSAAIMWALRKTT 583 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 E L+ L + + N+ Sbjct: 584 NEE-KLLAILEARREERKNN 602 >gi|212550525|ref|YP_002308842.1| inner membrane protein translocase component YidC [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|254772747|sp|B6YQF9|OXAA_AZOPC RecName: Full=Inner membrane protein oxaA gi|212548763|dbj|BAG83431.1| preprotein translocase YidC subunit [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 612 Score = 242 bits (619), Expect = 9e-62, Method: Composition-based stats. Identities = 128/615 (20%), Positives = 251/615 (40%), Gaps = 79/615 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + L +++ + I+E + + + N + + D Sbjct: 1 MD--KNTIIGFILIFWVLFGFAYLNHNRPIQEQLEKNPPMSANSVKKEFSNPISEIQSSD 58 Query: 61 -----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 A V ++N + ++ KG + + L+ Y N P+ + Sbjct: 59 IYGNFAASTKGTETFVTIQNALMEIKLSTKGGRIYSVRLKKY--TNYKNEPLYLFEGDES 116 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 N F ++NN L + + + ++S L T ++L I F T+ D Sbjct: 117 AFNIIFI------SSNNKVLNSEDFYFEIVSNSEL--ETILRLNAGKNRYIDFVYTLHPD 168 Query: 176 EHYLFK---IVDTVT----------N-NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 + Y+ + + N + +IR +GR + T F Sbjct: 169 D-YMVDWKLVSHNIQTELSHSMHTLNIQWMQKIRQQEKGRKFEERYARLTYKFLT----- 222 Query: 222 AVLGDKSLVEQKYSDIE-----KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 DIE K + N W+G D++++SVFI ++ Sbjct: 223 -------------DDIEQLRETKDDVRNVPNKLKWIGYKDQFFSSVFIVHSNFE-SAKLD 268 Query: 277 YLSDGHARYQAKFSANEITILPGKSIT-TTNFLFAGAKEFPTIHHYEK---DLAIPRFEM 332 + Y ++S + +I + G ++ + Y+K E Sbjct: 269 SKYLTYGAYIKEYSTSTSIPYNIANIEPIKFNFYFGPNDYSLLKSYDKTKLKEQNLELEK 328 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVG----NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 L+ GW F A +++ F L N G+AI++ T+ +K+ FPL K ++S+A Sbjct: 329 LVPLGWSLFRAINKCLIIPIFNWLTNGENVNLGLAILILTLIIKIALFPLTYKSFISSAK 388 Query: 389 MKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ ++P+++ + K+ Q + Q+ ++LY+ +NP+ GC+PILLQ+P A++ Sbjct: 389 MRVLKPQVENINIKYSGQEKALIRQQKTMELYRQVGVNPMTGCFPILLQMPFLIALFMFF 448 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM--HVGIWPIIMSLSMFIQM 505 ++ +RH + W DL+ D + +PF +P F+ H+ ++ ++MSL+ + Sbjct: 449 PSAIGLRHQS-FLWANDLSTYD--TLIQWSTDIPF-IPRFLGNHISLFCLLMSLATILNT 504 Query: 506 KMSPPPAD-------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + + G + + +MPVV F L+S+PAGL Y+ S +I+I+Q +I + Sbjct: 505 RYNTMYQQNIGQEQFPGMKLTMYFMPVVMFFFLNSYPAGLNYYYLISTLITIMQT-IIFR 563 Query: 559 MHGAEIGLIDRLRST 573 E+ L+ +L + Sbjct: 564 GLVNELNLLAKLEAN 578 >gi|86132804|ref|ZP_01051396.1| 60 KD inner membrane protein [Dokdonia donghaensis MED134] gi|85816758|gb|EAQ37944.1| 60 KD inner membrane protein [Dokdonia donghaensis MED134] Length = 628 Score = 242 bits (618), Expect = 1e-61, Method: Composition-based stats. Identities = 124/626 (19%), Positives = 249/626 (39%), Gaps = 84/626 (13%) Query: 1 MERNW--NYFVAIALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQ----TV 43 M++N+ N + + L I+ W ++ P + E++ ++ ++ Sbjct: 1 MKKNFDTNSLIGMLLMGGILL-WIIYFNKPTAEELEAEKAAQTEQVESQDTDVASLPVAQ 59 Query: 44 KQPNQVDNSYAAVLIDDRAQALS---------MSPRVELKNPSLIGSINLKGAQFDDLNL 94 P +S A + + +R A + + N L ++ KG ++ + Sbjct: 60 TAPAVASDSIANIALQNRLGAFAYSGSLPSAKEGATTTISNDVLEIKVSNKGGYITEVKM 119 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWN-LISGKILTPT 153 + +S V L+ N+ ST++N L + + +S Sbjct: 120 LQHST---YDSIPVYLIKDGNSTFNVS-----FSTSDNRNLNTKDLFFEPSLSKNGNNDV 171 Query: 154 TPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTN-----NSIDQIRFSPRGRIMRH-K 206 +KL N + + L E Y+ N+ + +R + MRH + Sbjct: 172 LSMKLKVSNNEYLEYR--YELKEGDYMMDFGMRSQGLSTRLNTSNPMRMQWDFKGMRHAR 229 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK-SSISNFHESNSWLGISDKYWASVFI- 264 Q+ N + E K + E W+ +++S+ I Sbjct: 230 SQSYENRYTRLTY--------KYEEDKTDKLSPAGDDDEIEEDLVWMNYRQHFFSSMLIS 281 Query: 265 --PSKETSFHSQFKYLS----DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 P KE S+ Y D + ++ ++ + + ++ G ++ + Sbjct: 282 ETPFKEARLTSKDLYKEADDRDEETIFTKQYGSDVLLEAKNGELDYAMQMYYGPTDYTIL 341 Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 Y++ L M + WG F F+ K + + F + GIAI++ T+ +KL P+ Sbjct: 342 KSYDQGLDEA---MPLGWGIFGFLNKYLVIPFFGFLSGFLPAGIAIIVMTIVIKLFLSPV 398 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 KQY S A MK ++P+I + EK+K + + Q+ + LY +P AGC P LLQIP Sbjct: 399 QYKQYTSQAKMKILKPEIAAISEKYKDNAMKK-QQETMALYSKAGASPAAGCLPALLQIP 457 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 VF+A++ + ++R + W DL++ D I L +PFY HV ++PI+ + Sbjct: 458 VFYALFTFFPSAFDLRGKS-FLWADDLSSYD--EIAKLPFEIPFYGD---HVSLFPILAA 511 Query: 499 LSMFIQMKM---SPPPADKGQAMI----------LNWMPVVFVFALSSFPAGLIIYWSWS 545 +++F M++ + Q + + + P++ + + + +GL +Y+ S Sbjct: 512 VTIFFSMRLTTGNQQMQQPTQEGMPDMSKMMKYMMYFSPLLMLVFFNQYASGLSLYYFIS 571 Query: 546 NVISIVQQAVIMKMHGAEIGLIDRLR 571 N+++I VI + E + ++ Sbjct: 572 NLLTIGIILVIKNVIIDEEKIRAKIE 597 >gi|146300139|ref|YP_001194730.1| putative inner membrane protein translocase component YidC [Flavobacterium johnsoniae UW101] gi|146154557|gb|ABQ05411.1| protein translocase subunit yidC [Flavobacterium johnsoniae UW101] Length = 636 Score = 242 bits (618), Expect = 1e-61, Method: Composition-based stats. Identities = 127/642 (19%), Positives = 245/642 (38%), Gaps = 94/642 (14%) Query: 1 MERNWN---YFVAIALSVIIVYAWQNFYVYPRIEEMNNE--------RKNIQTVKQPNQV 49 ME + L I+ W + P +E+ E ++ Q + Sbjct: 1 MEEKKLDLNSIIGFVLIFGILI-WIMYQNQPSEKEIAAEKAKKELVAKQEAQAKADKAKT 59 Query: 50 DNSYAAVLIDDRAQ-----------------ALSMSPRVELKNPSLIGSINLKGAQFDDL 92 + AV D Q + ++N + I KG + Sbjct: 60 AVAPTAVTPGDTVQLAQLQKTLGGFAYSAALPSAKEAFTTIENEKIKLKIANKGGYIVEA 119 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L+ + ++ +V L+ +N + T N +L T+ + + ++L+ Sbjct: 120 TLKEFKKFEKNSGQLVELIKDNNAHLNIQLQTVDNRTLNTKDLFFEPTLEKIGADQVLS- 178 Query: 153 TTPIKLVFKNANNILFERTISLDEH-YL--FKIVDTVTN---NSIDQIRFSPRGRIMRHK 206 + K N E L + YL F + N NS + + R++ Sbjct: 179 -----MRLKAGANEFLEYKYVLKPNDYLVGFDVRSQGLNKVLNSAKPLDLQWDLKTYRNE 233 Query: 207 PQTATNT-----FGVQE-GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWA 260 + + E G I G E+ + S++ ++ Sbjct: 234 KSISYENRYAEIYYEHEDGKINYAGLGKHEEETVDKV------------SFIAYKQHFFT 281 Query: 261 SVFIPSKETSFH----SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFP 316 S+ + K + + +F AN I + G ++ Sbjct: 282 SILVTDKPFETTKLESTNLVNDEKIDTVFTKQFKANVPLAFSNGEIDYKMQWYFGPADYK 341 Query: 317 TIHHYEKDLAIPRFEMLIDWGW--FYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVK 372 + Y+K+ F+ +I GW F +I K +F+ + F + + + GIAI++ T+ +K Sbjct: 342 VLKSYDKN-----FQKIIPLGWGIFGWINKLIFVPLFGFLSSTIGLSLGIAIIIFTIIIK 396 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 L P+ K ++S A MK ++P I EL EKFK+ P + Q+ ++LY +NP+AGC P Sbjct: 397 LAMSPITYKSFLSQAKMKVLRPDIAELGEKFKKDPMKK-QQETMKLYNKAGVNPMAGCIP 455 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVG 491 L+Q+P +A ++ + E+R + W DL++ D LPF++P + H+ Sbjct: 456 ALIQLPFMYASFQFFPAAFELRQKG-FLWADDLSSFDSVV------KLPFHIPLYGDHIS 508 Query: 492 IWPIIMSLSMFIQMKMS-------------PPPADKGQAMILNWMPVVFVFALSSFPAGL 538 ++PI+ ++++F MKM+ P K +++ P++ + +S+ AGL Sbjct: 509 LFPILAAIAIFFYMKMTSGDQQMAAPQQEGMPDMAKMMKIMIYVSPLMMLIFFNSYGAGL 568 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 +Y SN+I+I VI + +++ + Sbjct: 569 SLYNFISNLITIGIMFVIKNYIVDSDKIHAQIQENKQREPKK 610 >gi|225549578|ref|ZP_03770544.1| inner membrane protein OxaA [Borrelia burgdorferi 118a] gi|225369855|gb|EEG99302.1| inner membrane protein OxaA [Borrelia burgdorferi 118a] Length = 544 Score = 242 bits (618), Expect = 1e-61, Method: Composition-based stats. Identities = 128/576 (22%), Positives = 240/576 (41%), Gaps = 50/576 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQ--NFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M ++ + LS+ ++ + N I K +Q + DN ++V Sbjct: 1 MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKPSDKEVQFDLNKSFDDNEMSSVKS 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + S + ++ + + + L L+ + + + ++ + + T Sbjct: 61 NSF-NLIDKSQDIVVETGIYVATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNET-- 117 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DE 176 F ++ + +++ L +N N + + + + Sbjct: 118 --FFDISFDYFVDDLFLYKKIDDFNHEFKAYFK---------NNGKTYEYVKKYTFSKKD 166 Query: 177 HYLFKIVDTVTNNSIDQIR-FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 YL + TV + F I + + ++ +Q + L + K Sbjct: 167 EYLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQ--YNNYLSQIIYYDNKLK 224 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 + N W+G S KY+ + + + +FK + N+ Sbjct: 225 YGKDGLRINNPR---WIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIINNVRNKKN 278 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFML 349 I + F++AG K+ + ++K L F M ++ ++Y I PM M+ Sbjct: 279 I------SDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDNFFGMSVEKSFWYLIQVPMQMV 332 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + Sbjct: 333 MQVFYDVMPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDP-K 391 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAA 468 L + M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ Sbjct: 392 KLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIG 451 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADKGQAMILNWMP 524 D F Y + + I P IM + + M Q + MP Sbjct: 452 DSVYHFGY----KLYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMP 507 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++F F L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 508 IMFFFILYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|229496606|ref|ZP_04390320.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406] gi|229316503|gb|EEN82422.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406] Length = 620 Score = 242 bits (618), Expect = 1e-61, Method: Composition-based stats. Identities = 104/615 (16%), Positives = 239/615 (38%), Gaps = 70/615 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + ++L +++ + F P EE + P + +S A + Sbjct: 1 MD--KNTIIGVSLIAVVLIGF-TFLNRPTPEEATPKEPIEAISPAPAETTSSSAVLPTST 57 Query: 61 RAQALSMSPR----------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + A SP ++L+N L+ S + +G L+ Y P+ L Sbjct: 58 DSLAPETSPLLGLSGGQEQIIKLENEKLVVSFSNRGGAAVQARLKEYKA--QKEQPL-DL 114 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 +P + + ++ ++ ++ + T + ++L +A + F Sbjct: 115 FTPEDCS------FNLPLRTKMGQVIDTKDLYFEPIAQSDT-SLTMRLRVDSATYLDFAY 167 Query: 171 TISLDEHYLFKIVDT--------VTNNSIDQIRFSPRGRIM----RHKPQTATNTFGVQE 218 T+ + Y ++ + +N + + R +++ Q + + + Sbjct: 168 TL-VPNDYRLRLSISGAHLDRLFPSNMRYQDLEIGQKIRRQELSWQNENQYSAIYYKLFA 226 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF--K 276 + L DK +K +E SW+ DK+++SV+I +F S + Sbjct: 227 DKVERLSDKGSKSEK-----------VNERISWIAFKDKFFSSVWIADAANAFESSSLEQ 275 Query: 277 YLSDGHARYQAK-FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP----RFE 331 + Y + + L+ G E + Y++ + E Sbjct: 276 TVMPKDGEYTKDCKVVTSFPFSNAQDASAHFTLYMGPLEHHLLKAYDQGIEEDGDRLHLE 335 Query: 332 MLIDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 L+ G F + +++ + + N+G+ I+L T+ +K PL K Y+S A Sbjct: 336 HLVYVGGSVFRWLNVHLIIPIVDFLSKYISNWGLIILLLTLIIKTALSPLTFKSYMSQAK 395 Query: 389 MKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 M+ ++P+I + +K+ ++ + + LYK +P++GC P+LLQ+P ++Y Sbjct: 396 MRVLKPQIQAINDKYPGQEQAMMMKRSQETMALYKQAGASPMSGCLPMLLQMPFLISLYM 455 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 ++ +R + W +DL+ D I F I H+ ++ ++ +++ + Sbjct: 456 FFPTAIALRGES-FLWAQDLSTYD-AVISWNFDIPILSGLMGNHLSLFCLLWAVTNILYS 513 Query: 506 KMSPPPA---DKGQAMILNWMPVVFVFA----LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + + + D Q ++ +MP + ++ +GL Y+ S +I+I+Q + + Sbjct: 514 RYTMNMSATGDNQQMKMMKYMPYIMSIMFFFFFNNNASGLCYYYFISTLITILQ-FLGSR 572 Query: 559 MHGAEIGLIDRLRST 573 + E ++ ++ Sbjct: 573 LLINEEKVLAKMEEN 587 >gi|255532481|ref|YP_003092853.1| 60 kDa inner membrane insertion protein [Pedobacter heparinus DSM 2366] gi|255345465|gb|ACU04791.1| 60 kDa inner membrane insertion protein [Pedobacter heparinus DSM 2366] Length = 600 Score = 242 bits (618), Expect = 1e-61, Method: Composition-based stats. Identities = 116/609 (19%), Positives = 224/609 (36%), Gaps = 76/609 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ------------ 48 M+ N F + L +I++ F+ P E+ ER+ I Sbjct: 1 MD--RNTFTGLFLIMIVLAGSFYFF-KPSEAEIKKERERIAADSAKKAGVVNTPTPVAAV 57 Query: 49 ---VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 AA+ A L+N +L ++ KG + + ++G + + N Sbjct: 58 AATPVVDSAALKGPFGANISGTVQTSVLENENLKLVLSNKGGKILSVEVKG---EKTYNG 114 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 V L K + + ++ + G + + + + N Sbjct: 115 KPVILFDGDQNK------FGLNLNISGKIVSTNDLYFTATPGNGI-----VTMRANYSAN 163 Query: 166 ILFERTISLDEHY--------LFKIVDTVTNNSID-QIRFSPRGRIMRHKPQTATNTFGV 216 E L L + + NN+I + + K + Sbjct: 164 QYIEYIYDLKPKSSQVGFNINLNGLNQVIQNNTIALNWEATLLEQEKSGKKERE------ 217 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET---SFHS 273 DK+ + EK ++ W+ +++++ IP Sbjct: 218 HSAPYYKYADKNPDHLSIAKDEKEELA--AGKIEWISFKQQFFSAALIPKNGFEKGDLEV 275 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + Y A + + + G +F T+ +L E Sbjct: 276 KVSTEPGKIKWYGANMVLPFNQLAA---QSYAMVFYFGTNKFDTLKAQGYEL-----EKQ 327 Query: 334 IDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +D G++ F+++ + + N+G+ I+L T+ +K+ PL K Y+S A M+ Sbjct: 328 VDMGYWPLKYINRFIVLPVFKFLESFNWNYGVIILLLTIALKVAMSPLTYKSYLSMAKMR 387 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++P++D ++ K P +LQ+ ++LYK +NPL GC P+LLQ+P A + Sbjct: 388 ILKPEMDVIKAKVGDDNPTLLQQEYLKLYKQVGVNPLGGCLPMLLQLPFVMAFFFFFPNL 447 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E+R + W+KDL+ D F +PF H+ + ++M++S I + Sbjct: 448 FELRGET-FLWMKDLSTYDDFIKFGF--TIPFIGD---HLSLMCVLMTISTLIYTYFNNQ 501 Query: 511 --PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 A I MP++F+ L+S+P+GL Y+ +N+++ QQ +I M E Sbjct: 502 ISGATGQMKYIGYIMPIIFLGVLNSYPSGLNYYYFLANMLTFAQQFLIKSMVDDE----- 556 Query: 569 RLRSTFSKN 577 ++ T +N Sbjct: 557 KIHRTLQEN 565 >gi|218249421|ref|YP_002374953.1| inner membrane protein OxaA [Borrelia burgdorferi ZS7] gi|226321751|ref|ZP_03797277.1| inner membrane protein OxaA [Borrelia burgdorferi Bol26] gi|254772749|sp|B7J208|OXAA_BORBZ RecName: Full=Inner membrane protein oxaA gi|218164609|gb|ACK74670.1| inner membrane protein OxaA [Borrelia burgdorferi ZS7] gi|226232940|gb|EEH31693.1| inner membrane protein OxaA [Borrelia burgdorferi Bol26] Length = 544 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 119/510 (23%), Positives = 219/510 (42%), Gaps = 47/510 (9%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 ++ S + ++ + + + L L+ + + + ++ + + T F ++ Sbjct: 66 INKSQDIVVETGIYVATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNET----FFDI 121 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DEHYLFKI 182 + +++ L +N N + + + + YL K Sbjct: 122 SFDYFVDDLFLYKKIDDFNHEFKAYFK---------NNGKTYEYVKKYTFSKKDEYLMKF 172 Query: 183 VDTVTNNSIDQIR-FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 TV + F I + + ++ +Q + L + K + Sbjct: 173 KVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQ--YNNYLSQIIYYDNKLKYGKDGL 230 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 N W+G S KY+ + + + +FK + N+ I Sbjct: 231 RINNPR---WIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIINNVRNKKNI----- 279 Query: 302 ITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + F++AG K+ + ++K L F M ++ ++Y I PM M+M FY+ Sbjct: 280 -SDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVFYD 338 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M Sbjct: 339 VIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDP-KKLNEEM 397 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIF 474 +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 398 GRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHF 457 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADKGQAMILNWMPVVFVFA 530 Y + + I P IM + + M Q + MP++F F Sbjct: 458 GY----KLYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFI 513 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 514 LYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|88803448|ref|ZP_01118974.1| putative inner membrane protein translocase component YidC [Polaribacter irgensii 23-P] gi|88781014|gb|EAR12193.1| putative inner membrane protein translocase component YidC [Polaribacter irgensii 23-P] Length = 622 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 117/617 (18%), Positives = 240/617 (38%), Gaps = 74/617 (11%) Query: 1 MERNW---NYFVAIALSVIIVYAW---------------QNFYVYPRIEEMNNERKNIQT 42 ME+ N F+ + L I++ W + + N T Sbjct: 1 MEQKKFDINSFIGMILLGGIIFWWMSTRETEIKETPIATTTEIIAQTGDPTGKSISNSST 60 Query: 43 VKQPNQVDNSYAAVLIDDRAQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDV 101 ++ + + L A++ S + + +N + +I+ KG Q ++ ++ Y Sbjct: 61 IENDSIKQVALTNRLGAFAQSAITASEGISILENELIKLTIDNKGGQIKEVLIKNYKT-- 118 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 +S + ++ +N L++ +T N I I+ +KL Sbjct: 119 -YDSLPLYMIKDNNGS----FNLNFGTTDNRILNTKDLFFQPTITQNGENQVVSLKLNVS 173 Query: 162 NANNILFERTISLDEHYLFKIVDT------VTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + + + + E Y+ V N S + R++ T Sbjct: 174 DTKFLEYRYEMKPKE-YMVNFSIRSQGLSNVINAST-PMNLDWSLNAYRNEKSMKTENKM 231 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI---PSKETSFH 272 + + + + + W+ ++ S + P + Sbjct: 232 YSWYYYKTENEVEYL--------RPGNTEVANDVDWVFYKQHFFTSALLTDTPFNNATVT 283 Query: 273 SQFKYLSDG-HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 S L++ + ++ L + F G ++ + Y + Sbjct: 284 STDLVLNEELDTVFTKRYELKTPLALSNGELNYNMKWFYGPSDYNLLESY----DGTDLD 339 Query: 332 MLIDWGW--FYFIAKPMFM-LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 D GW F F+ + +F + + ++ N+G+ I+L T+ V+L+ PL K Y+S+A Sbjct: 340 QTADLGWGIFGFLNRTVFYPVFNLLKGVLSNYGLIIILMTIIVRLIMSPLVYKSYLSSAK 399 Query: 389 MKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 MK I+P++ L EK+ + Q+ + + + ++ ++GC P LLQ+PVFFA++K Sbjct: 400 MKVIRPELTALNEKYPGKENAMKRQQETMAIQRKAGVSMMSGCIPALLQMPVFFALFKFF 459 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 +L +R + W DL++ D IF L +PFY HV ++PI+ S+++F MKM Sbjct: 460 PTNLALRQES-FLWAPDLSSYD--TIFQLPFTIPFYGD---HVSLFPILASIAIFFYMKM 513 Query: 508 SPPPADKGQA----------MILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + QA ++ +M P++ +F +++ + L +Y+ SN+++IV Sbjct: 514 NQSQQANMQAPAQEGMPDMGKMMKYMIYFSPIMMLFFFNNYASSLSLYYFISNLLTIVIM 573 Query: 554 AVIMKMHGAEIGLIDRL 570 VI E + ++ Sbjct: 574 LVIKNYVIDEDKIHAQI 590 >gi|15605744|ref|NP_213121.1| hypothetical protein aq_175 [Aquifex aeolicus VF5] gi|38502858|sp|O66561|OXAA_AQUAE RecName: Full=Inner membrane protein oxaA gi|2982916|gb|AAC06534.1| hypothetical protein aq_175 [Aquifex aeolicus VF5] Length = 502 Score = 241 bits (616), Expect = 2e-61, Method: Composition-based stats. Identities = 121/553 (21%), Positives = 228/553 (41%), Gaps = 75/553 (13%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 + + L + + A++ FY+Y + + + VK+ + + +++ + Sbjct: 10 KRFLIFTILMFLFITAYELFYIYYVKPSQPQKTEKKEVVKKEEFKNVNLPQLMLGTFREK 69 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 +K ++ KG + + Y D+ S + + P Sbjct: 70 QEYKNTKTVKLGIYSLELSEKGGKILRFIDQKYGFDLISKAERELKIFPLE--------- 120 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 + T N P+ + N +I ++L+ K + ++ +S + + Sbjct: 121 --IFTGN----PDLDQKLNFGEYEIKEGKNSVELIHKE---LKVKKILSYK-NGAIHLSV 170 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 + + G F G + + +V D++ I+ Sbjct: 171 E----GLKPPFWVFVG------SPPDDEAFYTHVGPVLKIN-GEVVRLDVDDLK--GINE 217 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 F + + G +Y+ G YQ L K ++ Sbjct: 218 FEGNIEFGGEESRYFF-------------------KGAKDYQKHIVYKVK--LGDKFVSL 256 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 + FL+ G K L +DWG I KP+F+ + + Y G++ ++I Sbjct: 257 STFLYDGEKTIYLGAKDYARLRELGLVDTLDWGTLKIIVKPLFLFLYWIYEHTGSWVLSI 316 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 ++ T V++ FPL K VS ++ + PK++++++K+K P + +Q+ M++LY Sbjct: 317 LVLTFIVRIFLFPLGYKSVVSMQKLQELAPKMEKIKQKYKDDPVK-MQEEMMKLYAETGF 375 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NP+AGC PILLQIP+FFA+YKV+ I+++++ + + WI LA DP I Sbjct: 376 NPMAGCLPILLQIPIFFALYKVLIITVDLKVSS-FLWIPSLADKDPYYIL---------- 424 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 P+IM L+M +Q KM+P P D QA++ V F +FPAGL++YW+ Sbjct: 425 ---------PVIMGLTMILQQKMTPSP-DPKQALVGYITSVAFTLLFINFPAGLVLYWTL 474 Query: 545 SNVISIVQQAVIM 557 +NV +I+Q +I Sbjct: 475 NNVFNIIQNYLIK 487 >gi|325103807|ref|YP_004273461.1| membrane protein insertase, YidC/Oxa1 family [Pedobacter saltans DSM 12145] gi|324972655|gb|ADY51639.1| membrane protein insertase, YidC/Oxa1 family [Pedobacter saltans DSM 12145] Length = 590 Score = 241 bits (616), Expect = 2e-61, Method: Composition-based stats. Identities = 115/601 (19%), Positives = 234/601 (38%), Gaps = 69/601 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER---KNIQTVKQPNQVDNSYAAVL 57 M+ N F + L +II+ F + P EE+ E+ ++ VK V N + V Sbjct: 1 MD--KNTFTGLFLILIILVG-STFLLKPNEEEIKREQFVQDSLAKVKSGVPVTNEHKNVT 57 Query: 58 IDDRAQALSMSPRV---ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + D + V L+N + +++ G Q ++ P V L + S Sbjct: 58 LKDSVFVDNSKQEVISSVLENDKIKLNLSNLGGQIISSVVKT--ETTYRGEP-VVLFNKS 114 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK--NANNILFERTI 172 + +N + + + + + P KL ++ +A+ + Sbjct: 115 D--------FGLEFVSNGKNVNTNQLYFTRV------DSVPNKLTYRYADADGSYIDFIY 160 Query: 173 SLDEHY---LFKIV-----DTVTNNSID-----QIRFSPRGRIMRHKPQTATNTFGVQEG 219 SL E F I + ++ D Q + + ++ + +T + G Sbjct: 161 SLPEGSNKVDFNISLKGYSQKIPGSTTDLNLVWQTNLLQQEKDLKSERNYSTVYYKTSAG 220 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + L + E+ E W+ ++++ I S + Sbjct: 221 DVDYLSETETAEKD-----------VQEKIEWVSFKQHFFSAAIISKDGFSKGHTKVETT 269 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 + + + + P + + G +F + L ++ + WG Sbjct: 270 SSNDFVKRYSTKLSLPYKPSDVNSYDLTYYFGTNKFSELKDQGFSLEK---QVKMGWGPL 326 Query: 340 YFIAKPM-FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +I + + + ++F + ++G+ I+L TV +K FP K Y+S A M+ ++P++DE Sbjct: 327 KWINRYLVLPIFNFFNSFALSYGLIILLLTVILKGALFPFTYKSYLSMAKMRVLKPEMDE 386 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++ K + +LQ+ ++LYK +NPL GC P+L Q+P A + E+RH Sbjct: 387 IKAKVGEDNQALLQQEYLKLYKQAGVNPLGGCLPMLFQMPFILAFFYFFPNLFELRHES- 445 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQ 516 + W+ DL+ D F +L G+ H+ + ++M+ S I + + Sbjct: 446 FLWMTDLSTYDDIIKFPTIPLL-----GWDHISLMCLLMTTSTLIYTYYNNQTSNVQGQM 500 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 I P++F L+S+P+GL Y+ +N+++ QQ I + D++ + + Sbjct: 501 KYIGYITPLIFFGVLNSYPSGLNYYYFCANILTFAQQFFIRRFVDD-----DKIHAQIQE 555 Query: 577 N 577 N Sbjct: 556 N 556 >gi|224532140|ref|ZP_03672772.1| inner membrane protein OxaA [Borrelia valaisiana VS116] gi|224511605|gb|EEF82011.1| inner membrane protein OxaA [Borrelia valaisiana VS116] Length = 544 Score = 241 bits (615), Expect = 3e-61, Method: Composition-based stats. Identities = 122/574 (21%), Positives = 238/574 (41%), Gaps = 51/574 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQ--NFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M ++ + LS+ ++ + N +PR+ + K +Q D+ + Sbjct: 1 MNQSKRILRTVYLSLFLIGLFMLINDIFFPRMLNLKPSDKEVQ-FDLNKSFDDDEMFLSK 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + S + ++ + + + L L+ + + ++ + + KN Sbjct: 60 SNNINLIDKSQDIVVETGIYVATFSTFRGNLVSLKLKNHLNLEKDPTDLINV----DYKN 115 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DE 176 F ++ + ++ L +N N + + Sbjct: 116 ETFFDVSFDYLVEDLFLYKKIDDFNHEFKAYFK---------NNGKTYEYIKRYIFSKKN 166 Query: 177 HYLFKIVDTVTNNSIDQIR-FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 YL K TV + + I + + ++ +Q + Y Sbjct: 167 EYLMKFKVTVNDLEDYNLFDIDSYKIIFSSEIERLSDKAKLQ------YNNYLSQIIYYD 220 Query: 236 DIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 + K +N W+G S KY+ + + + +F+ + + N+ Sbjct: 221 NKLKYGKDGLKINNPRWIGSSTKYFEVLIF---KENMEVEFRKEKEILKSFIVNNVGNKK 277 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKD------LAIPRFEMLIDWGWFYFIAKPMFM 348 I + F++AG K+ + ++K+ L+ F M ++ ++ I PM M Sbjct: 278 NI------SDEFFIYAGPKDNRYLDIFDKNGDNTFGLSDIAFGMSVEKSLWHLIQVPMQM 331 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +M FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P Sbjct: 332 VMQVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDP- 390 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAA 467 + L + M +LYK +NPL GC+P++LQ+P+FFA+Y +++ +R A F GWI DL+ Sbjct: 391 KKLNEEMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSI 450 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP----PPADKGQAMILNWM 523 D F Y + + I P IM + +S Q + M Sbjct: 451 GDSVYHFGY----KLYFVSWTDIRILPFIMMFTQLGSTIVSSNIDLKNLGAQQKFLYFGM 506 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P++F F L + P+GL++YW +N+ +I+QQ I Sbjct: 507 PIMFFFILYNMPSGLLVYWITTNIFTILQQYYIR 540 >gi|224533541|ref|ZP_03674130.1| inner membrane protein OxaA [Borrelia burgdorferi CA-11.2a] gi|224513214|gb|EEF83576.1| inner membrane protein OxaA [Borrelia burgdorferi CA-11.2a] gi|312149425|gb|ADQ29496.1| inner membrane protein OxaA [Borrelia burgdorferi N40] Length = 544 Score = 241 bits (615), Expect = 3e-61, Method: Composition-based stats. Identities = 118/510 (23%), Positives = 219/510 (42%), Gaps = 47/510 (9%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 ++ S + ++ + + + L L+ + + + ++ + + T F ++ Sbjct: 66 INKSQDIVVETGIYVATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNET----FFDI 121 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DEHYLFKI 182 + +++ L +N N + + + + YL + Sbjct: 122 SFDYFVDDLFLYKKIDDFNHEFKAYFK---------NNGKTYEYVKKYTFSKKDEYLMQF 172 Query: 183 VDTVTNNSIDQIR-FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 TV + F I + + ++ +Q + L + K + Sbjct: 173 KVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQ--YNNYLSQIIYYDNKLKYGKDGL 230 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 N W+G S KY+ + + + +FK + N+ I Sbjct: 231 RINNPR---WIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIINNVRNKKNI----- 279 Query: 302 ITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + F++AG K+ + ++K L F M ++ ++Y I PM M+M FY+ Sbjct: 280 -SDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVFYD 338 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M Sbjct: 339 VIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDP-KKLNEEM 397 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIF 474 +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 398 GRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHF 457 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADKGQAMILNWMPVVFVFA 530 Y + + I P IM + + M Q + MP++F F Sbjct: 458 GY----KLYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFI 513 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 514 LYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|223888963|ref|ZP_03623554.1| inner membrane protein OxaA [Borrelia burgdorferi 64b] gi|223885779|gb|EEF56878.1| inner membrane protein OxaA [Borrelia burgdorferi 64b] Length = 544 Score = 241 bits (614), Expect = 3e-61, Method: Composition-based stats. Identities = 118/510 (23%), Positives = 219/510 (42%), Gaps = 47/510 (9%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 ++ S + ++ + + + L L+ + + + ++ + + T F ++ Sbjct: 66 INKSQDIVVETGIYVATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNET----FFDI 121 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DEHYLFKI 182 + +++ L +N N + + + + YL + Sbjct: 122 SFDYFVDDLFLYKKIDDFNHEFKAYFK---------NNGKTYEYVKKYTFSKKDEYLMQF 172 Query: 183 VDTVTNNSIDQIR-FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 TV + F I + + ++ +Q + L + K + Sbjct: 173 KVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQ--YNNYLSQIIYYDNKLKYGKDGL 230 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 N W+G S KY+ + + + +FK + N+ I Sbjct: 231 RINNPR---WIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIINNVRNKKNI----- 279 Query: 302 ITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + F++AG K+ + ++K L F M ++ ++Y I PM M+M FY+ Sbjct: 280 -SDEFFIYAGPKDNRYLDVFDKRDDNTFGLFNIFFGMSVEKSFWYLIQVPMQMVMQVFYD 338 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M Sbjct: 339 VIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDP-KKLNEEM 397 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIF 474 +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 398 GRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHF 457 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADKGQAMILNWMPVVFVFA 530 Y + + I P IM + + M Q + MP++F F Sbjct: 458 GY----KLYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFI 513 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 514 LYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|312148357|gb|ADQ31016.1| inner membrane protein OxaA [Borrelia burgdorferi JD1] Length = 544 Score = 240 bits (613), Expect = 4e-61, Method: Composition-based stats. Identities = 117/510 (22%), Positives = 219/510 (42%), Gaps = 47/510 (9%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 ++ S + ++ + + + L L+ + + + ++ + + T F ++ Sbjct: 66 INKSQDIVVETGIYVATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNET----FFDI 121 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DEHYLFKI 182 + +++ L +N N + + + + YL + Sbjct: 122 SFDYFVDDLFLYKKIDDFNHEFKAYFK---------NNGKTYEYVKKYTFSKKDEYLMQF 172 Query: 183 VDTVTNNSIDQIR-FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 TV + F I + + ++ +Q + L + K + Sbjct: 173 KVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQ--YNNYLSQIIYYDNKLKYGKDGL 230 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 N W+G S KY+ + + + +FK + N+ I Sbjct: 231 RINNPR---WIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIINNVRNKKNI----- 279 Query: 302 ITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + F++AG K+ + ++K L F M ++ ++Y I PM M+M FY+ Sbjct: 280 -SDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVFYD 338 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++ N+G++I+ T+ V++L FPL K + +TA + +QP++ EL+ KFK P + L + M Sbjct: 339 VIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPRMKELQAKFKHDP-KKLNEEM 397 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIF 474 +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 398 GRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHF 457 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADKGQAMILNWMPVVFVFA 530 Y + + I P IM + + M Q + MP++F F Sbjct: 458 GY----KLYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFI 513 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 514 LYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|15594787|ref|NP_212576.1| putative inner membrane protein translocase component YidC [Borrelia burgdorferi B31] gi|38502849|sp|O51398|OXAA_BORBU RecName: Full=Inner membrane protein oxaA gi|2688353|gb|AAB91510.1| inner membrane protein [Borrelia burgdorferi B31] Length = 544 Score = 240 bits (613), Expect = 5e-61, Method: Composition-based stats. Identities = 118/510 (23%), Positives = 219/510 (42%), Gaps = 47/510 (9%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 ++ S + ++ + + + L L+ + + + ++ + + T F ++ Sbjct: 66 INKSQDIIVETGIYVATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNET----FFDI 121 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DEHYLFKI 182 + +++ L +N N + + + + YL + Sbjct: 122 SFDYFVDDLFLYKKIDDFNHEFKAYFK---------NNGKTYEYVKKYTFSKKDEYLMQF 172 Query: 183 VDTVTNNSIDQIR-FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 TV + F I + + ++ +Q + L + K + Sbjct: 173 KVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQ--YNNYLSQIIYYDNKLKYGKDGL 230 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 N W+G S KY+ + + + +FK + N+ I Sbjct: 231 RINNPR---WIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIINNVRNKKNI----- 279 Query: 302 ITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + F++AG K+ + ++K L F M ++ ++Y I PM M+M FY+ Sbjct: 280 -SDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVFYD 338 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M Sbjct: 339 VIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDP-KKLNEEM 397 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIF 474 +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 398 GRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHF 457 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADKGQAMILNWMPVVFVFA 530 Y + + I P IM + + M Q + MP++F F Sbjct: 458 GY----KLYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFI 513 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 514 LYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|195942021|ref|ZP_03087403.1| putative inner membrane protein translocase component YidC [Borrelia burgdorferi 80a] gi|226321073|ref|ZP_03796615.1| inner membrane protein OxaA [Borrelia burgdorferi 29805] gi|226233483|gb|EEH32222.1| inner membrane protein OxaA [Borrelia burgdorferi 29805] Length = 544 Score = 240 bits (612), Expect = 5e-61, Method: Composition-based stats. Identities = 117/510 (22%), Positives = 218/510 (42%), Gaps = 47/510 (9%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + S + ++ + + + L L+ + + + ++ + + T F ++ Sbjct: 66 IDKSQDIVVETGIYVATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNET----FFDI 121 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DEHYLFKI 182 + +++ L +N N + + + + YL + Sbjct: 122 SFDYFVDDLFLYKKIDDFNHEFKAYFK---------NNGKTYEYVKKYTFSKKDEYLMQF 172 Query: 183 VDTVTNNSIDQIR-FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 TV + F I + + ++ +Q + L + K + Sbjct: 173 KVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQ--YNNYLSQIIYYDNKLKYGKDGL 230 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 N W+G S KY+ + + + +FK + N+ I Sbjct: 231 RINNPR---WIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIINNVRNKKNI----- 279 Query: 302 ITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + F++AG K+ + ++K L F M ++ ++Y I PM M+M FY+ Sbjct: 280 -SDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVFYD 338 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L + M Sbjct: 339 VIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDP-KKLNEEM 397 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIF 474 +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 398 GRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHF 457 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADKGQAMILNWMPVVFVFA 530 Y + + I P IM + + M Q + MP++F F Sbjct: 458 GY----KLYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFI 513 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 L + P+GL+IYW +N+ +I+QQ + KMH Sbjct: 514 LYNMPSGLLIYWITTNIFTILQQYYL-KMH 542 >gi|149277802|ref|ZP_01883942.1| putative inner membrane protein translocase component YidC [Pedobacter sp. BAL39] gi|149231490|gb|EDM36869.1| putative inner membrane protein translocase component YidC [Pedobacter sp. BAL39] Length = 598 Score = 240 bits (612), Expect = 6e-61, Method: Composition-based stats. Identities = 122/611 (19%), Positives = 236/611 (38%), Gaps = 66/611 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT----VKQPNQVDNSYAAV 56 M+ N F + L +I++ F+ P E+N E++ I + A Sbjct: 1 MD--RNTFTGLFLIMIVLAGSFYFF-SPSQTEINKEKERIAADSLKKTTKAVTPAATAPT 57 Query: 57 LIDDRAQALS---------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + + AL + L+N L ++ KG + + ++ Sbjct: 58 VPAVDSAALKGPFGGNITGTAQTTVLENEQLKLTLTNKGGRILSVVVKDQKT---YEGKP 114 Query: 108 VTLLSPSNTKNAYFAELD--YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---N 162 V L K + V+T + P +N + L ++ V+ Sbjct: 115 VVLFDGDQNKFGLNLNIGGKLVNTNDLYFTPTNNGNSVTMRATYLGNQ-YVEYVYDLQAK 173 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSID-QIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 +NN+ F+ ++ + + NN+I+ + K + Sbjct: 174 SNNVGFKINLN-------GMNQVIQNNAINLNWETVLLEQEKSGKKEKE------HAAPY 220 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK---ETSFHSQFKYL 278 ++S + EK + W +++++V +P + + + Sbjct: 221 YKYVNESPDHLSIAKDEKEDLK--EGKIEWFSFKQQFFSAVLLPKEAFEKGDLEVKVSTQ 278 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 Y A + S + + G +F ++ ++ E L+D G+ Sbjct: 279 PGQIKWYAANMELKFNQLA---SQSYAMDFYFGTNKFSSLKDQGHEI-----EKLVDMGY 330 Query: 339 FYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + F+++ F L G N+G+ I++ T+ +K+ PL K Y S A M+ ++P+ Sbjct: 331 WPLKYINRFVVLPVFKFLEGFGWNYGLIILVLTIMLKVAMSPLTYKSYTSMAKMRILKPE 390 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 +DE++ K + P +LQ+ ++LYK +NPL GC P+LLQ+P A + E+R Sbjct: 391 MDEIKAKVGEDNPTLLQQEYLKLYKQVGVNPLGGCLPMLLQLPFVMAFFFFFPNLFELRG 450 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--PAD 513 + W+KDL+ D F LPF H+ + ++M++S I + A Sbjct: 451 ES-FLWMKDLSTYDDFIKFGF--TLPFIGD---HLSLMCVLMTISTLIYTYFNNQISGAT 504 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI---GLIDRL 570 I MP+VF+ L+S+P+GL Y+ +N+++ QQ +I M E L + Sbjct: 505 GQMKYIGYIMPIVFLGVLNSYPSGLNYYYFLANMLTFAQQFLIKSMVDDEKIHRTLQENK 564 Query: 571 RSTFSKNYNSQ 581 + S+ Sbjct: 565 TKPAEQKKKSK 575 >gi|297621235|ref|YP_003709372.1| inner membrane protein translocase component YidC [Waddlia chondrophila WSU 86-1044] gi|297376536|gb|ADI38366.1| inner membrane protein translocase component YidC [Waddlia chondrophila WSU 86-1044] Length = 822 Score = 240 bits (612), Expect = 6e-61, Method: Composition-based stats. Identities = 127/580 (21%), Positives = 218/580 (37%), Gaps = 103/580 (17%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSPSNTKNAYFAELDYV 127 L+N + G ++NL + N V ++ Y A Sbjct: 241 VLENDYQQLVFSTTGGALVEINL---PFETGENQKSVVKEIEFDKEIEEQHPYDARFPLQ 297 Query: 128 STANNIELPNS-----------------------------------NTVWNLISGKILTP 152 S E P N N++S Sbjct: 298 SYYTPGESPTGPFVENSKGRLGGYYPLLRRDLIQKGAKPSIQVLPENYALNIVSKYPEIA 357 Query: 153 TTPIKLVFKNANNILFE---------RTISLDEH----YLFKIVDTVTNNSIDQIRFSPR 199 T P ++ + N I+FE +T S DE Y+ + TV +S Sbjct: 358 TLPYRVTHFDKNKIVFEASQNNRKIIKTYSFDEQKNAPYIVNLSITVEGDSRGLW----- 412 Query: 200 GRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYW 259 + P + L + VE D K S++ W+ S+ ++ Sbjct: 413 --LTTGVPDVEWISNAPAPALKYRLTRQGKVEVNNLDKPKDSLTMSTVVPDWICNSNGFF 470 Query: 260 ASVFIPS------------KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI--TTT 305 + P S+ + + + R+QA + +LP S T Sbjct: 471 GIILDPLSPIDDGLRVLHIDGEEMPSRLVLVGEEYDRFQASKLPGYLMMLPLNSKGGTMN 530 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW-------GWFYFIAKP----MFMLMSYFY 354 +FAG T+ + + P D+ GWF FI+ P +F+LM +F+ Sbjct: 531 FRIFAGPFGDKTLTTVDHLYSNPETGYNPDYKGSQTFHGWFSFISAPFSKFLFVLMKFFH 590 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +L G++GI+I+L T+ ++++ +PL S M+ +QP++ ++EK K+ P + Q Sbjct: 591 HLTGSWGISIILLTIALRVMLYPLNAWSTKSMLKMQQLQPEVQAIQEKHKKDP-KKAQLE 649 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNI 473 + LY + +NP++GC+P+L+Q+P ++ ++ + E+R APF GWI +LAA D Sbjct: 650 VTNLYMSRGVNPISGCFPMLIQLPFLIGMFDLLKSTFELRGAPFIPGWIDNLAAPD---- 705 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---------PPPADKGQAMILNWMP 524 LF + PI++ + MFIQ + + Q + M Sbjct: 706 -VLFSWKTPIFFIGNQFHLLPILLGVVMFIQQRTMSNAPKDPNLMTEQQRQQRTMGTMMT 764 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 VF FP+GL IYW S ++ I+QQ + A Sbjct: 765 AVFSVMFYHFPSGLNIYWLSSMLLGILQQWWTQRKFKANP 804 >gi|216264429|ref|ZP_03436421.1| inner membrane protein OxaA [Borrelia burgdorferi 156a] gi|215980902|gb|EEC21709.1| inner membrane protein OxaA [Borrelia burgdorferi 156a] Length = 544 Score = 240 bits (612), Expect = 6e-61, Method: Composition-based stats. Identities = 120/518 (23%), Positives = 220/518 (42%), Gaps = 63/518 (12%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 ++ S + ++ + + + L L+ + + + ++ + + T F ++ Sbjct: 66 INKSQDIVVETGIYVATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNET----FFDI 121 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DEHYLFKI 182 + +++ L +N N + + + + YL K Sbjct: 122 SFDYFVDDLFLYKKIDDFNHEFKAYFK---------NNGKTYEYVKKYTFSKKDEYLMKF 172 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK--------Y 234 TV + + + V I L DK+ ++ Y Sbjct: 173 KVTVNG-------------LEDYNLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIYY 219 Query: 235 SDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + K +N W+G S KY+ + + + +FK + N+ Sbjct: 220 DNKLKYGKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGILKSFIINNVRNK 276 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMF 347 I + F++AG K+ + ++K L F M ++ ++Y I PM Sbjct: 277 KNI------SDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQ 330 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 M+M FY+++ N+G++I+ T+ V++L FPL K + +TA + +QP++ EL+ KFK P Sbjct: 331 MVMQVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPRMKELQVKFKHDP 390 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLA 466 + L + M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ Sbjct: 391 -KKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLS 449 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADKGQAMILNW 522 D F Y + + I P IM + + M Q + Sbjct: 450 IGDSVYHFGY----KLYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFG 505 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 MP++F F L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 506 MPIMFFFILYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|224532508|ref|ZP_03673133.1| inner membrane protein OxaA [Borrelia burgdorferi WI91-23] gi|224512580|gb|EEF82956.1| inner membrane protein OxaA [Borrelia burgdorferi WI91-23] Length = 544 Score = 240 bits (612), Expect = 6e-61, Method: Composition-based stats. Identities = 120/518 (23%), Positives = 220/518 (42%), Gaps = 63/518 (12%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 ++ S + ++ + + + L L+ + + + ++ + + T F ++ Sbjct: 66 INKSQDIIVETGIYVATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNET----FFDI 121 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DEHYLFKI 182 + +++ L +N N + + + + YL + Sbjct: 122 SFDYFVDDLFLYKKIDDFNHEFKAYFK---------NNGKTYEYVKKYTFSKKDEYLMQF 172 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK--------Y 234 TV + + + V I L DK+ ++ Y Sbjct: 173 KVTVNG-------------LEDYNLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIYY 219 Query: 235 SDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + K +N W+G S KY+ + + + +FK + N+ Sbjct: 220 DNKLKYGKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIINNVRNK 276 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMF 347 I + F++AG K+ + ++K L F M ++ ++Y I PM Sbjct: 277 KNI------SDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQ 330 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 M+M FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P Sbjct: 331 MVMQVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDP 390 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLA 466 + L + M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ Sbjct: 391 -KKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLS 449 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADKGQAMILNW 522 D F Y + + I P IM + + M Q + Sbjct: 450 IGDSVYHFGY----KLYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFG 505 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 MP++F F L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 506 MPIMFFFILYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|196229389|ref|ZP_03128254.1| 60 kDa inner membrane insertion protein [Chthoniobacter flavus Ellin428] gi|196226621|gb|EDY21126.1| 60 kDa inner membrane insertion protein [Chthoniobacter flavus Ellin428] Length = 552 Score = 239 bits (611), Expect = 7e-61, Method: Composition-based stats. Identities = 111/558 (19%), Positives = 209/558 (37%), Gaps = 68/558 (12%) Query: 37 RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 P A L S+ + +GA L+ Sbjct: 2 PPAGTPAGTPAGTPGETKPAAPAAPAAPAVPEKTETLDTDSVAYTFTTRGAGIAKALLKK 61 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 + + + E + + +LP + L P I Sbjct: 62 HEAE--------------HGTRMTLNEFGDMPIGSVTDLPGQISNVAFHYATDL-PAGVI 106 Query: 157 KLVFKNANNILFERTIS------LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210 + + + + L++ Y+ + N S I Sbjct: 107 TFEGSDERGLHLTKKFNVPKSTNLNKDYIVTMRLVFDNRSKQPITVPAYYVNTGSAAPVH 166 Query: 211 TNTFGVQEGF---IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 GF A D + E + + HE W ++D+Y+ ++ P Sbjct: 167 QKDRIDYTGFKWPGAKFVDVTWFSGGMFKKEHGTYTATHEGIPWAAVADQYFTTIVTPQV 226 Query: 268 ETSFHSQ-----------------------FKYLSDGHARYQAKFSA----NEITILPGK 300 ++ + +DG + + T+ PG+ Sbjct: 227 DSENKDTPSKERGNSVWATRFQISDDVWKATSHDADGSSSARYGIEGALGMPGFTLAPGQ 286 Query: 301 SITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDW--GWFYFIAKPMFMLMSYFY 354 ++ G +E+ + LA F + + + F +K + ++ + Sbjct: 287 MQVQIFHIYTGPREYGRLKTMPDGQVEVLAFSDFGGIFSFLGPFVGFFSKVLLYSLNSLH 346 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 VG++ IAI++ T+ +K + +P+ K + M+ + PK+ E+REKF Q PQ + Sbjct: 347 AWVGSYAIAIIIITLLIKAILWPMQNKATKAAKRMQALSPKMTEVREKF-QDDPQKMNAE 405 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +++LYK + +NPLAGCWP +Q+P+FF Y ++ ++E+R+A + W++DL+ D +F Sbjct: 406 VMKLYKEYGVNPLAGCWPAFIQMPIFFGFYNMLGKAVELRNA-KFLWVQDLSQPD--TVF 462 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 L G+ V I PI M+ +M QMK SP D Q I+ MP++FV ++ Sbjct: 463 HLPGLD-------FPVNILPIFMAATMVWQMKASPKTGDPQQQKIMMIMPLIFVLFCYNY 515 Query: 535 PAGLIIYWSWSNVISIVQ 552 + L +Y + +N++S+VQ Sbjct: 516 ASALALYLTVNNLVSVVQ 533 >gi|325107204|ref|YP_004268272.1| membrane protein oxaA [Planctomyces brasiliensis DSM 5305] gi|324967472|gb|ADY58250.1| Membrane protein oxaA [Planctomyces brasiliensis DSM 5305] Length = 680 Score = 239 bits (611), Expect = 8e-61, Method: Composition-based stats. Identities = 115/524 (21%), Positives = 227/524 (43%), Gaps = 57/524 (10%) Query: 73 LKNPS---LIGSINLKGAQFDDLNLRG--YHLDVSSNSPIVTLL-SPSNTKNAYFAELDY 126 LK + L + +GA + L Y P+ + +P ++ + ++D Sbjct: 96 LKTDANTFLQVDLTSRGAAIATVQLNDPRYRELTDREQPLQLVGPAPKGSQLTFDLKIDE 155 Query: 127 VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN-ILFERTISLDEH-------- 177 V+ + + + V + + LT + + + + + +T L E Sbjct: 156 VNRQLLEQRTSLDRVNWQVDEETLTD-RSVTFTYPSPDGTLELRKTYQLQEGNPDDRNAD 214 Query: 178 ---YLFKIVDTVTNNSIDQIRFSPRGRIMRHKP----QTATNTFGVQEGFIAVLG----D 226 Y + N S + P + +Q GF+ Sbjct: 215 TPGYCLNVSLEFRNLSDKPQMLVYNLQGPVGFPLEEAENTRRFLALQAGFVRGNSVNHEQ 274 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE---------TSFHSQFKY 277 S E E+S I + ++GI +Y+A++ IP + T + Sbjct: 275 VSAQEIAEQAEEESGIDSLQAPVRYVGIDGQYFAALLIPDENQEDENWIAQTQPQLTKRG 334 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + + +N + + ++T T L+ G K + ++ D +I++G Sbjct: 335 TDEQSSLISLTLVSNPVELPANGAVTHTYTLYTGPKRTSLLRPFDADA-------IIEYG 387 Query: 338 WFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 WF I+K M +M++F+N L +G+AI++ TV V+ +P+++K ++ MK +QP+I Sbjct: 388 WFGAISKLMLAIMNFFHNTLYLPYGLAIVMLTVIVRGAMYPISRKHALAAKKMKEMQPRI 447 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +E+R+K++ + L KA +++ K +GC P+LLQ+P+F +Y+ + +S+++R A Sbjct: 448 EEIRKKYENDK-EKLAKAQMEIMKESGF--FSGCLPMLLQLPIFIGLYQALYVSVDLRMA 504 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPA--- 512 + WI +LAA D +F + LPF F + P++ +Q KM +PPPA Sbjct: 505 -EFLWINNLAAPD--RLFQMPFSLPFLGNDF---NLLPMLTVALFVMQQKMFAPPPANEE 558 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q ++ +M + PAGL IY+ S++ +I ++ ++ Sbjct: 559 QALQQKMMGYMMIFIGVMFYRVPAGLCIYFIASSLWAICERKIL 602 >gi|270285312|ref|ZP_06194706.1| putative inner membrane protein translocase component YidC [Chlamydia muridarum Nigg] gi|270289329|ref|ZP_06195631.1| putative inner membrane protein translocase component YidC [Chlamydia muridarum Weiss] gi|301336709|ref|ZP_07224911.1| putative inner membrane protein translocase component YidC [Chlamydia muridarum MopnTet14] Length = 785 Score = 239 bits (610), Expect = 1e-60, Method: Composition-based stats. Identities = 110/443 (24%), Positives = 189/443 (42%), Gaps = 50/443 (11%) Query: 157 KLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNT 213 LV ++ + +T +L E Y F + T D I P+ +N Sbjct: 345 TLVLESGDG-GIRKTYTLGEQPYAFDLEIQTTRGQEDLW-------ITSGVPEVEIMSNA 396 Query: 214 FGVQEGFIAVLGDKS-LVEQKYSDIEKSSISNFHESNSWLGISDKYW------------- 259 F + AV +KS L+ K + S + S W+ S+ Y+ Sbjct: 397 FVPAVKYHAVKKNKSDLINVKLPKAKDSLLVRNDASPQWILNSNGYFGVILTPKTPLPTG 456 Query: 260 -ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 AS FIP D + LP ++ ++AG PT+ Sbjct: 457 YASSFIPGNAVPTRLTQLSPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLSEPTL 516 Query: 319 HHY------EKDLAIPRFEMLIDWGWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTT 368 K + + + G+F FI +P +F++M +F L G++GI+I+L T Sbjct: 517 KALDRAHTNHKGESPEYVDAIAFRGFFSFITEPFAALLFIIMKFFQFLTGSWGISIILLT 576 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KL+ +PL S M+ + P I ++++K+K+ P+ Q ++ LYK + +NP+ Sbjct: 577 IVLKLVLYPLNAWSIRSMRRMQKLSPYIQDIQQKYKR-EPKRAQMEIMALYKVNKVNPIT 635 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+++QIP A++ ++ S +R A F GWI +L A D LF Sbjct: 636 GCLPLIIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWETPIWFIG 690 Query: 488 MHVGIWPIIMSLSMFIQMKMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + PI++ + MF Q K+S + Q + M ++F F +FP+GL I Sbjct: 691 KEFHLLPILLGIVMFAQQKISAIKRSGPVSDQQRQQEAMGTMMALLFTFMFYNFPSGLNI 750 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW S ++ ++QQ K+ + Sbjct: 751 YWLSSMLLGVIQQWATNKILDEK 773 >gi|15835140|ref|NP_296899.1| putative inner membrane protein translocase component YidC [Chlamydia muridarum Nigg] gi|38503223|sp|Q9PKE3|OXAA_CHLMU RecName: Full=Inner membrane protein oxaA gi|7190563|gb|AAF39364.1| inner membrane protein, putative [Chlamydia muridarum Nigg] Length = 787 Score = 239 bits (610), Expect = 1e-60, Method: Composition-based stats. Identities = 110/443 (24%), Positives = 189/443 (42%), Gaps = 50/443 (11%) Query: 157 KLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNT 213 LV ++ + +T +L E Y F + T D I P+ +N Sbjct: 347 TLVLESGDG-GIRKTYTLGEQPYAFDLEIQTTRGQEDLW-------ITSGVPEVEIMSNA 398 Query: 214 FGVQEGFIAVLGDKS-LVEQKYSDIEKSSISNFHESNSWLGISDKYW------------- 259 F + AV +KS L+ K + S + S W+ S+ Y+ Sbjct: 399 FVPAVKYHAVKKNKSDLINVKLPKAKDSLLVRNDASPQWILNSNGYFGVILTPKTPLPTG 458 Query: 260 -ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 AS FIP D + LP ++ ++AG PT+ Sbjct: 459 YASSFIPGNAVPTRLTQLSPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLSEPTL 518 Query: 319 HHY------EKDLAIPRFEMLIDWGWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTT 368 K + + + G+F FI +P +F++M +F L G++GI+I+L T Sbjct: 519 KALDRAHTNHKGESPEYVDAIAFRGFFSFITEPFAALLFIIMKFFQFLTGSWGISIILLT 578 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KL+ +PL S M+ + P I ++++K+K+ P+ Q ++ LYK + +NP+ Sbjct: 579 IVLKLVLYPLNAWSIRSMRRMQKLSPYIQDIQQKYKR-EPKRAQMEIMALYKVNKVNPIT 637 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+++QIP A++ ++ S +R A F GWI +L A D LF Sbjct: 638 GCLPLIIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWETPIWFIG 692 Query: 488 MHVGIWPIIMSLSMFIQMKMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + PI++ + MF Q K+S + Q + M ++F F +FP+GL I Sbjct: 693 KEFHLLPILLGIVMFAQQKISAIKRSGPVSDQQRQQEAMGTMMALLFTFMFYNFPSGLNI 752 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW S ++ ++QQ K+ + Sbjct: 753 YWLSSMLLGVIQQWATNKILDEK 775 >gi|312891415|ref|ZP_07750932.1| membrane protein insertase, YidC/Oxa1 family [Mucilaginibacter paludis DSM 18603] gi|311296109|gb|EFQ73261.1| membrane protein insertase, YidC/Oxa1 family [Mucilaginibacter paludis DSM 18603] Length = 609 Score = 239 bits (609), Expect = 1e-60, Method: Composition-based stats. Identities = 119/605 (19%), Positives = 244/605 (40%), Gaps = 52/605 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK----------NIQTVKQPNQVD 50 M+ N + + L ++I++ + + P ++ E+ I+T + D Sbjct: 1 MD--KNTYTGLFLIMLILFG-SFYLMRPSEADIKKEKARIHQDSLNKAGIKTTPVVAKTD 57 Query: 51 NSYAAVLIDDR-------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 ++ +ID A + + L+N L ++ +GA+ + L+ + Sbjct: 58 SAKKPQVIDSAVLKSAFGAATVGTEQLITLENNDLRVKVSTQGARVQSVELKNFK-TFDK 116 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 P++ +N F + N++ S T N+ + T +L + Sbjct: 117 -KPLILFDGANNHFGLNFIAGNKKINTNDLYFKPSATGLNVTGHDSYSIT--FRLNYSAT 173 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ---TATNTFGVQEGF 220 I + T+S Y + + N +D + + + + T + ++ Sbjct: 174 QYIDYVYTLSAK-GYRLGLTLKL--NGLDNVIADSKIVDINWQSSMLKTEKDMTMERQYS 230 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + S + + + W+ ++++V I + S L Sbjct: 231 TVYFKNTDDDVDELSVTKDDAKDISDKKIQWVSFKQHFFSNVLIYKDGFTKSSLHVSLDT 290 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW-- 338 + + A+ + I + + G EF + +L + ID GW Sbjct: 291 ANKTEVKQMQAS-LQIPANNAGVYPLDFYYGPNEFKVLKAQGYNL-----DKQIDLGWGP 344 Query: 339 FYFIAKP-MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +I K + ++ + N+GI I+L TV +KL+ PL K Y+S A M+ ++P++D Sbjct: 345 LKYINKYAVLVVFDFLKQFGWNYGIVILLLTVLLKLVLSPLTYKSYLSMAKMRVLKPEMD 404 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E++ K + P +LQ+ ++LYK +NPL GC P++LQ+P+ FA + E+R Sbjct: 405 EIKAKVGEDNPTLLQQEYMKLYKKAGVNPLGGCLPMVLQLPIVFAFLRFFPALFELRGES 464 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--PADKG 515 + W+KDL+ D F +P H+ + ++M++S FI + A Sbjct: 465 -FLWMKDLSTYDDLIKFG--TTIPLLGD---HLSLMCLLMTISTFIYTYFNNQISGATGQ 518 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 I PV+F+ L+ +P+GL Y+ +N+++ QQ +I M + ++ + Sbjct: 519 MKYIGYITPVIFIVVLNKYPSGLNYYYFLANMLTFAQQYLIRLMVDDK-----KIHAQIQ 573 Query: 576 KNYNS 580 +N Sbjct: 574 ENKKK 578 >gi|183219716|ref|YP_001837712.1| inner membrane protein OxaA [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909851|ref|YP_001961406.1| preprotein translocase subunit YidC [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774527|gb|ABZ92828.1| Preprotein translocase, YidC subunit [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778138|gb|ABZ96436.1| Inner membrane protein OxaA; putative membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 649 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 120/588 (20%), Positives = 210/588 (35%), Gaps = 61/588 (10%) Query: 29 RIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQ 88 + + N N T P LK S + + G + Sbjct: 43 EVSKTENTDTNKTTTADPKAEIKKATTESTKLNPVKTEDVKTFSLKTDSFLVRFSSLGGR 102 Query: 89 FDDLNLRGYHLDVSS-----NSPIVTLLSPSNTKNAY----FAELDYVSTANNIELPNSN 139 + ++ + S P + T+ A D+ + +P S Sbjct: 103 ITEYYIKDHKEPDGSEFVIAKDPKFQIDFDGQTEKAVELTRGQGFDFNIIEDKDTIPFSA 162 Query: 140 TVWNLISGKILTPTTPIKLVFKNANN-ILFERTISL--DEHYLFKIVDTVTNNSIDQIRF 196 S T + + + ++ E+Y FK T+ N + + I Sbjct: 163 YNLVNFSSSYNADTKTVIFEAPSLDGKFTIQKRFQFFPSENY-FKFHLTLKNRTGETIHI 221 Query: 197 SP-----RGRIMRHKPQTAT-----NTFGVQEGFIAVLGDKSLVEQKY------------ 234 SP R N F D S + Sbjct: 222 SPTKSDVYFRSFSSLGPILKKKEDFNDRDNAHYFRYYYLDGSFKDHVDGTSSQGFFDNLF 281 Query: 235 -----SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 D ++ ++G +Y+ V P + + Sbjct: 282 GSNEGKDTRYEIKKGSNDKVDFVGTGSRYFIGVIDPLDDKPAGVLLDNRKGNETGVLLVY 341 Query: 290 SANEITILPGKSITTTNFLFAGAKEF--------PTIHHYEKDLAIPRFEMLIDWGWFYF 341 + + PG+ I + G +E D +D + Sbjct: 342 --DNWKLGPGEEIKLDYAAYVGVRELDGTAFRDSKLDPKINNDSVFAGLSESLDKSFNQG 399 Query: 342 IAKPM----FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 I P+ ++ Y ++ N+G AI++ + KL F+PL KKQ S M+ + P+I Sbjct: 400 ITTPLRNGIVWILKKIYLVIPNYGWAIVIFAILFKLAFYPLNKKQAESMKKMQELSPQIK 459 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + EK+ P ++ Q+ I+LYK + NP+AGC P+L+QIP+F A+Y S ++++ ++P Sbjct: 460 LINEKYADDP-KLKQEKTIELYKKNGTNPMAGCLPMLIQIPIFIALYTAFSDTVDLWNSP 518 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WIKDL+ D T+F G + + I P+IM + +Q KM+ D Q Sbjct: 519 -FLWIKDLSEPD-----TVFTTPKLAFIGTLAINILPLIMVATQVVQSKMTTVSTDPNQK 572 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 M++ MPV+ ++ S PAG+ +YW+ N++SI QQ K +E Sbjct: 573 MMMYMMPVIMLYFFWSMPAGVTMYWTMQNILSIAQQVYTNKFVKSEDK 620 >gi|111115269|ref|YP_709887.1| putative inner membrane protein translocase component YidC [Borrelia afzelii PKo] gi|216263402|ref|ZP_03435397.1| inner membrane protein OxaA [Borrelia afzelii ACA-1] gi|122956367|sp|Q0SN67|OXAA_BORAP RecName: Full=Inner membrane protein oxaA gi|110890543|gb|ABH01711.1| inner membrane protein [Borrelia afzelii PKo] gi|215980246|gb|EEC21067.1| inner membrane protein OxaA [Borrelia afzelii ACA-1] Length = 544 Score = 237 bits (606), Expect = 3e-60, Method: Composition-based stats. Identities = 117/515 (22%), Positives = 219/515 (42%), Gaps = 57/515 (11%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + + + ++ + + L L+ + + ++ + + KN F ++ Sbjct: 66 IDKAQDIIVETGIYFATFSTFRGNLVSLKLKNHLNLEKDPTDLINV----DYKNEPFFDV 121 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 + ++ L +N N + + + + + + Sbjct: 122 SFDYLVEDLFLYKKIDDFNHEFKAYFK---------NNGKTYEYVKKYTFSKKNEYLMRF 172 Query: 185 TVTNNSIDQIRF--------SPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 V N ++ + +I R A + I +K ++ D Sbjct: 173 EVIVNGLEDYNLLDIDSYKITFSSQIER-LSDKAKLQYNNYLSQIIYYDNK--LKYGKDD 229 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + ++ W+G S KY+ + + + +FK + N+ I Sbjct: 230 LRINNPK-------WIGSSTKYFEVLV---SKENMEVEFKKEKGILKSFIVNNVINKKNI 279 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKD------LAIPRFEMLIDWGWFYFIAKPMFMLM 350 + F++AG K+ + ++K+ L+ F M ++ +Y I PM M+M Sbjct: 280 ------SDKFFIYAGPKDNRYLDIFDKNSDNTFGLSDIAFGMSVEKSLWYLIQVPMQMVM 333 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDP-KK 392 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469 L + M +LYK +NPL GC+PI+LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 393 LNEEMGRLYKEEGVNPLGGCFPIILQLPIFFALYSLVNNLFLLRGANFIPGWIDDLSIGD 452 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP----PPADKGQAMILNWMPV 525 F Y + + I P IM + +S Q + MP+ Sbjct: 453 SVYHFGY----KLYFVSWTDIRILPFIMMFTQLGSTIVSSNIDLKNLGAQQKFLYFGMPI 508 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +F F L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|225552387|ref|ZP_03773327.1| inner membrane protein OxaA [Borrelia sp. SV1] gi|225371385|gb|EEH00815.1| inner membrane protein OxaA [Borrelia sp. SV1] Length = 544 Score = 237 bits (606), Expect = 3e-60, Method: Composition-based stats. Identities = 117/510 (22%), Positives = 218/510 (42%), Gaps = 47/510 (9%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 ++ S + ++ + + + L L+ + + + ++ + + T F E+ Sbjct: 66 INKSQYIVVETGIYVATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNET----FFEV 121 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DEHYLFKI 182 + +++ L +N N + + + + YL K Sbjct: 122 SFDYFVDDLFLYKKIDDFNHEFKAYFK---------NNGKTYEYVKKYTFSKKDEYLMKF 172 Query: 183 VDTVTNNSIDQIR-FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 TV + F I + + ++ +Q + L + K + Sbjct: 173 KVTVNGLEDYDLFDFDSYKIIFSSEIERLSDKAKLQ--YNNYLSQIIYYDNKLKYGKDGL 230 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 N W+G S KY+ + + + +FK + N+ I Sbjct: 231 RINNPR---WIGSSTKYFGVLV---SKENMEVEFKKERGILKSFIVNNVRNKKNI----- 279 Query: 302 ITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + F++AG K+ + ++ L F M ++ +++ I PM M+M FY+ Sbjct: 280 -SDEFFIYAGPKDNRYLDVFDNRGDNTFGLFDIFFGMSVEKSFWHLIQVPMQMVMQVFYD 338 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++ N+G++I+ T+ V++L FPL K + +TA + +QP++ EL+ KFK P + L + M Sbjct: 339 VIPNWGLSIIFLTIVVRVLIFPLTFKGFRATAELSKLQPRMKELQVKFKHDP-KKLNEEM 397 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIF 474 +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D F Sbjct: 398 GRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHF 457 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADKGQAMILNWMPVVFVFA 530 Y + + I P IM + + M Q + MP++F F Sbjct: 458 GY----KLYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFI 513 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 514 LYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|224534702|ref|ZP_03675274.1| inner membrane protein OxaA [Borrelia spielmanii A14S] gi|224513950|gb|EEF84272.1| inner membrane protein OxaA [Borrelia spielmanii A14S] Length = 544 Score = 237 bits (606), Expect = 3e-60, Method: Composition-based stats. Identities = 119/514 (23%), Positives = 214/514 (41%), Gaps = 55/514 (10%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + S + ++ + + L L+ + + + ++ + + +N F ++ Sbjct: 66 IDKSQDIVVETGIYCATFSTFRGNLVSLKLKNHLNLEKTPTDLINV----DYENEPFFDV 121 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL--DEHYLFKI 182 + ++ L +N N + + + YL K Sbjct: 122 SFDYLVEDLFLYKKIDDFNHEFKAYFK---------NNGKTYEYVKKYTFSKKNEYLIKF 172 Query: 183 VDTVTN-NSIDQIRFSPR----GRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 TV D G + A + I + KY Sbjct: 173 EVTVNGLEGYDLFNIDSYKIVFGSQIERLSDKAKLQYNNYLSQIIYYD----NKLKYG-- 226 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 K +S + W+G S KY+ + + + +FK + N+ I Sbjct: 227 -KDGLSINNPK--WIGSSTKYFEVLL---SKENMEIEFKKEKGILKSFIVNNVINKKNIN 280 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKD------LAIPRFEMLIDWGWFYFIAKPMFMLMS 351 F++AG K+ + ++K+ L+ F M ++ ++ I PM ++M Sbjct: 281 D------KFFIYAGPKDNRYLDIFDKNDANTFGLSDSAFGMSVEKSLWHLIQVPMQIVMQ 334 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P + L Sbjct: 335 VFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDP-KKL 393 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADP 470 + M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 394 NEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGANFIPGWIDDLSIGDS 453 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP----PPADKGQAMILNWMPVV 526 F Y + + I P IM + +S Q + MP++ Sbjct: 454 VYHFGY----KLYFVSWTDIRILPFIMMFTQLGSTIVSSNIDLKNLGAQQKFLYFGMPIM 509 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 F F L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 510 FFFILYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|310825627|ref|YP_003957985.1| inner membrane protein, 60 kda [Stigmatella aurantiaca DW4/3-1] gi|309398699|gb|ADO76158.1| Inner membrane protein, 60 kDa [Stigmatella aurantiaca DW4/3-1] Length = 607 Score = 237 bits (605), Expect = 4e-60, Method: Composition-based stats. Identities = 125/603 (20%), Positives = 226/603 (37%), Gaps = 81/603 (13%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ---------TVKQPNQVDNS 52 + A+ +S + + F + T+ P Sbjct: 13 DSQKRMLTALGVSFAAITIYMMFLAPTAPTAPEPGAADAGVAAGAADGGTLAVPAPPPGG 72 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIG--SINLKGAQFDDLNLRG-------------- 96 L + +P L+ + + +GA F L+G Sbjct: 73 GTPELAAGESPPEPEAPVRTLERTRQEAKYTFSSEGAGFTSAVLQGPKMREQQSLSVAEG 132 Query: 97 YHLDVSSN---SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 Y + P + L+ P + + VS LP + +G+ Sbjct: 133 YKELFGAELLPPPQMNLVQPVPGQPLPLS----VSIEGTSPLPANARYQVQEAGE----- 183 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + + + +R + + V N S + R + H N Sbjct: 184 GTVVFTTRRGPWEVVKRVQWPNAGHELTYTVQVHNTSSQPLTGELR---VHHNRAIDPNF 240 Query: 214 FGVQEGFIAVLGDKS----LVEQKYSDI-EKSSISNFHESNSWLGISDKYWASVFIPSKE 268 F V + E+ + + E + F + GI +Y+ S+ P + Sbjct: 241 EHAPSFFGGVGNQSRAACHVGEKLHKRVPEDEASETFSGPVHYFGIDQQYFLSMLYPLEA 300 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI- 327 + + F +T+ G+++T + G K+ + + Sbjct: 301 PREGHCVLTATPTVRQVAVGF---PLTVGAGETVTVRFGGWFGPKDPDLLKPVPSQEVLS 357 Query: 328 ----------PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 P E +D+G + I K + M +F+ + GN+G+AI+L TV VKL+ P Sbjct: 358 AAGMTAAAWDPTIEETVDFGIWAVICKLLLFFMKWFHAVTGNWGVAIILLTVLVKLVLLP 417 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 L K V +K +QPK++E+R+KF + + + +++LY+ +NPL GC P+L+Q+ Sbjct: 418 LTYKSMVGMEAVKELQPKMEEIRKKFAED-RERMNMEVMKLYQQAKVNPLGGCLPLLIQM 476 Query: 438 PVFFAIYKVISISLEMRHAPFWGWI-KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 PV+ A++ + S ++ PF+G + +DL DPT + P+ Sbjct: 477 PVWIALFTALRNSFDIYWEPFFGPVWRDLTYKDPTYLL-------------------PLA 517 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + +SM I KM P D QA I+ W MP++F L +PAGL +Y +N++SI QQ Sbjct: 518 LGVSMIITQKMQPQMMDAAQARIMIWVMPIIFTLTLLQYPAGLSLYIFTNNLLSIGQQWG 577 Query: 556 IMK 558 + K Sbjct: 578 LRK 580 >gi|189501692|ref|YP_001957409.1| putative inner membrane protein translocase component YidC [Candidatus Amoebophilus asiaticus 5a2] gi|254772744|sp|B3ER28|OXAA_AMOA5 RecName: Full=Membrane protein oxaA gi|189497133|gb|ACE05680.1| hypothetical protein Aasi_0237 [Candidatus Amoebophilus asiaticus 5a2] Length = 596 Score = 237 bits (604), Expect = 5e-60, Method: Composition-based stats. Identities = 114/575 (19%), Positives = 218/575 (37%), Gaps = 36/575 (6%) Query: 22 QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM---SPRVELKNPSL 78 F + + Q+ S A + + A + + + L+N + Sbjct: 21 HFFDNKLPKTSQQTTTQEVAHNTSNIQLQTSEATLNLQTGIFAKATQGVTKDIILENKDI 80 Query: 79 IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138 +++ GA+ ++ L+ Y + P+ L S F N + Sbjct: 81 RVTLSSHGAKVKEVILKQYKDYLGK--PLKLLDEQSTNMGFQFTSNQASINTNTLFFNTD 138 Query: 139 NTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNN----SIDQ 193 +T + I T I L N ++ +L E Y + Sbjct: 139 DTDQYIQQASIGKVTFMIPL---GEPNQYLQQVYTLPSEGYALTQNWEFVGTENYIDQGK 195 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 I F I R + + L +K+ K E+ WL Sbjct: 196 IDFVWHDFIKRAEKDVQACR--NKTTINYYLANKTFKHLK-EHTEQKEEQTIQTPIQWLA 252 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS--ITTTNFLFAG 311 I +++ + + + + ++ + T + G Sbjct: 253 IKQRFFTAGIFTDQPFESGNILLKPTTQPDKFVKEAYTTVSLASNNLQPIQKGTFRFYFG 312 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTT 368 + ++ + F + GW +++++ S+ V N+G+ I++ Sbjct: 313 PNTYKDLNSF-----AQGFSKNLPLGWPIVKWINLYLIIPIFSFIEKYVSNYGLVILILV 367 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 +F+KLL PL+ K Y+S A MK ++P +D L+ K+ Q +Q ++LY+ INPL+ Sbjct: 368 IFIKLLLLPLSYKSYISMAEMKVLKPTLDALKAKYGND-MQSVQMEQVKLYREMGINPLS 426 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+LLQ+P+ A++ ++++R + W DL+ D I L +PFY Sbjct: 427 GCIPVLLQMPILLAMFNFFPNAIDLRQ-KAFLWAPDLSTYD--AIINLPFQIPFYGS--- 480 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKG--QAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 HV ++ ++M+ S + S + +P+ F+F L+SFPAGL Y+ SN Sbjct: 481 HVSLFTLLMTASTILYTWSSNQVNTPQGPMKTMSYLLPITFMFILNSFPAGLSFYYFVSN 540 Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + QQA+I + E + +L K+ N++ Sbjct: 541 LFTFAQQALIKRFVN-EDKIKAKLAKNKEKSANNK 574 >gi|219685168|ref|ZP_03539988.1| inner membrane protein OxaA [Borrelia garinii Far04] gi|219673264|gb|EED30283.1| inner membrane protein OxaA [Borrelia garinii Far04] Length = 544 Score = 237 bits (604), Expect = 5e-60, Method: Composition-based stats. Identities = 125/518 (24%), Positives = 215/518 (41%), Gaps = 59/518 (11%) Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 ++ S + ++ + + L L+ + + ++ + + KN F Sbjct: 64 DLINKSQNIVVETEIYFATFSTFRGNLVSLKLKKHLNLEKDPTDLINV----DYKNETFF 119 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-ANNILFERTISL--DEHYL 179 ++ ++ L +N FKN + + + YL Sbjct: 120 DVSLDYLVEDLFLYKKIDDFNHEFKAY----------FKNHGKTYEYIKKYTFSEKNEYL 169 Query: 180 FKIVDTVTNNSI------DQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 K V N D + I R A + I + K Sbjct: 170 MKFTVIVNNLDDYNLFDIDSYKIVFSSEIER-LSDKAKLQYNNYLSQIIYYD----NKLK 224 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 Y K +S + W+G S KY+ + + +FK + N+ Sbjct: 225 YG---KDGLSIHNPR--WIGSSTKYFEVLV---SRENMEVEFKKERGILKSFIVNNVGNK 276 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMF 347 I + F++AG K+ + ++K L+ F M ++ +Y I PM Sbjct: 277 KNI------SDEFFIYAGPKDNRYLDIFDKSGDNTFGLSDIAFGMSVEKSLWYLIQVPMQ 330 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 M+M FY ++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK P Sbjct: 331 MVMQVFYGVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDP 390 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLA 466 + L + M +LYK +NPL GC+P++LQ+P+FFA+Y +++ +R A F GWI DL+ Sbjct: 391 -KKLNEEMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLS 449 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP----PPADKGQAMILNW 522 D F Y + + I P IM + +S Q + Sbjct: 450 IGDSVYHFGY----KLYFVSWTDIRILPFIMMFTQLGSTIISSNLDLKNLGAQQKFLYFG 505 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 MP++F F L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 506 MPIMFFFILYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|149372149|ref|ZP_01891419.1| putative inner membrane protein translocase component YidC [unidentified eubacterium SCB49] gi|149354916|gb|EDM43478.1| putative inner membrane protein translocase component YidC [unidentified eubacterium SCB49] Length = 628 Score = 237 bits (604), Expect = 5e-60, Method: Composition-based stats. Identities = 116/575 (20%), Positives = 234/575 (40%), Gaps = 53/575 (9%) Query: 32 EMNNERKNIQTVKQPNQVDNSYAAVL---------IDDRAQALSMSPRVELKNPSLIGSI 82 + N Q + N AA++ + + S ++N L + Sbjct: 56 KANQTTTLTQATEDMAVKPNDSAAMMQLKNKLGSFAYSGSLPSATSNTTVIENDVLYLEV 115 Query: 83 NLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVW 142 + KG + L+ + +S V L+ N+ + T N +L T+ Sbjct: 116 SNKGGYVTEARLKEFKT---YDSIPVYLIKDGNS-SFNLKFTSENRTLNTKDLYFEPTLT 171 Query: 143 NLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN-----NSIDQIRFS 197 + ++LT ++L I + I L Y+ ++ + Sbjct: 172 QNGANQVLT----MRLKTAEDKFIEYRYEI-LPGEYMTNFSIRSQGLDGMLDTSQPLEID 226 Query: 198 PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISD 256 + + RH + + + K+S ++ + E SW+ Sbjct: 227 WQLKGYRHAKSISYENRYTRLTY-------EYEGSKHSKLDPTGEDVETEKEVSWMNFRQ 279 Query: 257 KYWASVFI---PSKETSFHSQ-FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 +++S+ + P KE S + Y + A + G +++ ++ G Sbjct: 280 HFFSSMLLTGDPFKEVKLSSIDLVEDEEVDTVYTKHYGAKMLLTPKGGALSYNMNMYYGP 339 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 ++ Y+++L M + WG F I K + + F + + GIAI++ T+ +K Sbjct: 340 TDYKIFKKYDRNLDEA---MPLGWGIFGVINKYFIIPLYGFLSTYLSAGIAIIVMTILIK 396 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 LL + KQY++ A MK ++P+ID ++EKF + +Q+ ++L +PL GC P Sbjct: 397 LLLSFVQYKQYLAQAKMKVLKPEIDAIKEKFGDNK-MKIQQETMKLQNIAGASPLKGCLP 455 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +LQIPVF+A++ ++++R + W DL++ D ++ L +PFY HV + Sbjct: 456 AILQIPVFYALFTFFPTAIDLRQKS-FLWADDLSSFD--SVINLPFTIPFYGD---HVSL 509 Query: 493 WPIIMSLSMFIQMKMSP--------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 +PI+ S+++FI M M+ P ++ P+ + +++ +GL +Y+ Sbjct: 510 FPILASIAIFIYMTMTMGQSMQAQQQPGMPNMKFLMYLSPLFMLVFFNNYASGLSLYYFI 569 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 SN+I+I VI E + +++ +K Sbjct: 570 SNLITIGIMLVIKNWIIDEDKIHAQIQVNKAKPKK 604 >gi|299137229|ref|ZP_07030411.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX8] gi|298600634|gb|EFI56790.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX8] Length = 561 Score = 236 bits (603), Expect = 6e-60, Method: Composition-based stats. Identities = 114/567 (20%), Positives = 222/567 (39%), Gaps = 59/567 (10%) Query: 3 RNWNYFVAIALSVII-VYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +N + +A++L + + Q F +E + + P + AA + Sbjct: 14 QNVHTILALSLVFFLALLGVQAFQQKKPVESKSKPSSTV----IPAAPNTLVAAAQANQE 69 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + S + ++N + +G Q L+ Y S P+ + + + + Y Sbjct: 70 SMKASSESEIIVENKFYRIRFSNRGGQVLSWILKQY--TDDSGKPLDLVNQRAASLHGY- 126 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 L + + + ++ S L + + + + +T + D+ Y+ Sbjct: 127 -PLSLYTQKAGLTKQLAEALYEPSSSGRLVAPGKLTFTY-SEGGVSVIKTFTFDQSYIVG 184 Query: 182 IVDTVTNNS--IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 VT++ + P G Q + V +G + V Q I Sbjct: 185 ADILVTDHGMPVAASLCWPSGL----GDQETLQNYNV-DGRFDASLNGKFVSQTVKSI-- 237 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHS-------QFKYLSDGHARYQAKFSAN 292 ++ S + G+SD Y+A++F+P T + + + Sbjct: 238 TTGVVQAGSYDYAGVSDLYFAAIFLPEHSTKTTVLNLRNEISIPRTNGQTHSALSDVVSV 297 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEK-----DLAIPRFEMLIDWGWFYFIAKPMF 347 + LFAG K + L P E L+ +G +AKP+F Sbjct: 298 PGVAVGNGEGHIRLRLFAGPKAIELLSSVHALAPDGSLTGPDLEPLVRFGLLRIVAKPLF 357 Query: 348 MLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 + +++ + +LV ++G AI++ T+F+ L+ P K S M++IQP+I+ +R +FK Sbjct: 358 LALNWIHVHLVHSWGWAILILTLFINLVLMPTRIKSMRSQLKMQHIQPQINAIRARFKDC 417 Query: 407 PP-----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + K + L K IN G P+LLQ+P+ + Y+++ +E+RHA W W Sbjct: 418 KMGDPHLLEMNKEIFDLQKKEGINVFGGMLPLLLQMPLLYGFYRMLQNVIELRHA-EWLW 476 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL 520 + DL++ DP ++ +F + ++MF+ ++P D Q ++ Sbjct: 477 LHDLSSLDPLHVLPVFFV-------------------VTMFLLQLLTPSSGTDPVQRKMM 517 Query: 521 N-WMPVVFVFALSSFPAGLIIYWSWSN 546 +PV+ F AGL +YWS+ N Sbjct: 518 ALVLPVLGFFMTWKVGAGLALYWSFGN 544 >gi|15639934|ref|NP_219385.1| putative inner membrane protein translocase component YidC [Treponema pallidum subsp. pallidum str. Nichols] gi|189026172|ref|YP_001933944.1| inner membrane protein translocase component YidC [Treponema pallidum subsp. pallidum SS14] gi|3323271|gb|AAC65906.1| membrane protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018747|gb|ACD71365.1| membrane protein [Treponema pallidum subsp. pallidum SS14] Length = 665 Score = 236 bits (602), Expect = 9e-60, Method: Composition-based stats. Identities = 114/590 (19%), Positives = 231/590 (39%), Gaps = 80/590 (13%) Query: 30 IEEMNNE-----RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINL 84 EE + + Q QP + V + + V ++ P + + Sbjct: 88 PEETRTQSAHGGAADTQETTQPAAHPSGQVLVFPESETEERVERTYV-VRTPLVQVTFTN 146 Query: 85 KGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNL 144 +G LR ++ V ++ + + F+ + PN N ++ + Sbjct: 147 RGGDILSYQLREHYAAQRRE--YVEMVEQARPDHRAFSL-----ALGDEYAPNVNALFQV 199 Query: 145 ISGKILTPTTPI----KLVFKNANN-----ILFERTISLDEHYLFKIVDTV--------- 186 I + ++A+ +L +R + ++Y+F++ ++ Sbjct: 200 KQEIGARGVHSIGFYRSVATQHADGTRTPFVLAKRYVFYPDNYMFELHVSLSADVLEERE 259 Query: 187 -------------TNNSIDQIRFS--------PRGRIMRHKPQTAT-----NTFGVQEGF 220 TN + +R P+ + + + Sbjct: 260 DSRQGAKVRAVAETNAGPATTVLARANGFDFGTASYTLRTPPEIGPERNAADKYEFRTFM 319 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + G ++ SW +S KY+A + +P+ S Sbjct: 320 VGAGGKAKTY-----ALKGDGREQVDTPVSWASVSGKYFALIVLPNDADSLKRLVLSAPQ 374 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEM------L 333 Q A + ++ ++ G + Y P E Sbjct: 375 AETAVQ-HHIAFVRRAVAQPAVADVYRVYIGPCAEQYLSAYNVASRNPYGLERTYIDAVA 433 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + G Y + + L+ FY L+ N+G+AI+L T+ +K+LFFPL K+ +++ M+ +Q Sbjct: 434 VSGGILYPLEVLLKWLLRLFYTLIPNWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQ 493 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P + ++E++K + Q + + M +LY+ NPL+GC P L+Q+P+ FA+Y++ + E Sbjct: 494 PHMQRIQERYKGN-TQKIHEEMAKLYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEF 552 Query: 454 RHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 R A F WI DL+ AD +++TL LP + + + + P++ +S + K++ P Sbjct: 553 RGAMFIPYWIPDLSLAD--SVWTLPFALP--VTQWTQMRMLPVLYVVSQIMFSKLTQVPH 608 Query: 513 DKGQA----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + Q ++ MP+ F F P+GL++YW+ N +++VQQ V+ + Sbjct: 609 TEQQKTSMTIMTYVMPLFFFFFFYDAPSGLLVYWTAMNGVTLVQQLVMKR 658 >gi|219684221|ref|ZP_03539165.1| inner membrane protein OxaA [Borrelia garinii PBr] gi|219672210|gb|EED29263.1| inner membrane protein OxaA [Borrelia garinii PBr] Length = 544 Score = 236 bits (601), Expect = 1e-59, Method: Composition-based stats. Identities = 126/519 (24%), Positives = 218/519 (42%), Gaps = 61/519 (11%) Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 ++ S + ++ + + L L+ + + ++ + + KN F Sbjct: 64 DLINKSQNIVVETEIYFATFSTFRGNLVSLKLKNHLNLEKDPTDLINV----DYKNETFF 119 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-ANNILFERTISLDEHYLFK 181 ++ ++ L +N FKN + + + E + Sbjct: 120 DVSLDYLVEDLFLYKKIDDFNHEFKAY----------FKNHGKTYEYVKKYTFSEKNEYL 169 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK-------- 233 + TV NS+D + V I L DK+ ++ Sbjct: 170 MKFTVIVNSLDDYNLF-----------DIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIY 218 Query: 234 YSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 Y + K N W+G S KY+ + + +FK + N Sbjct: 219 YDNKLKYGKDGLSIHNPRWIGSSTKYFEVLV---SRENMEVEFKKERGILKSFIVNNVRN 275 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPM 346 + I + F++AG K+ + ++K L+ F M ++ +Y I PM Sbjct: 276 KKNI------SDEFFIYAGPKDNRYLDIFDKSGDNTFGLSDIAFGMSVEKSLWYLIQVPM 329 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 M+M FY ++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK Sbjct: 330 QMVMQVFYGVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHD 389 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P + L + M +LYK +NPL GC+PI+LQ+P+FFA+Y +++ +R A F GWI DL Sbjct: 390 P-KKLNEEMGRLYKEEGVNPLGGCFPIILQLPIFFALYSLVNNLFLLRGASFIPGWIDDL 448 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP----PPADKGQAMILN 521 + D F Y + + I P IM + +S Q + Sbjct: 449 SIGDSVYHFGY----KLYFVSWTDIRILPFIMMFTQLGSTIVSSNLDLKNLGAQQKFLYF 504 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 MP++F F L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 505 GMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|34540342|ref|NP_904821.1| putative inner membrane protein translocase component YidC [Porphyromonas gingivalis W83] gi|38502879|sp|P60036|OXAA_PORGI RecName: Full=Inner membrane protein oxaA gi|34396654|gb|AAQ65720.1| membrane protein, putative [Porphyromonas gingivalis W83] Length = 627 Score = 236 bits (601), Expect = 1e-59, Method: Composition-based stats. Identities = 126/618 (20%), Positives = 255/618 (41%), Gaps = 62/618 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN-------QVDNSY 53 M+ N + + L ++++ + E + I+ +Q + + Sbjct: 1 MD--KNTVIGLVLIGLVIFGFSWLNRPDPQEIEAQRKAAIEAARQDSIAKAEAELLAART 58 Query: 54 AAVLIDDRAQALSMSP-------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 D QA + +VEL N + ++ KG ++ LR Y Sbjct: 59 QGATPDSIKQAAGYNQYGLLAAATAGAEEQVELANGKIALKLSTKGGAIREVLLRDYKTH 118 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELD--YVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 P+ + N +D V T + P S T +++ ++L Sbjct: 119 --DGKPLYLFREGESDFNLPLRTVDNRLVDTRDLYFSPISRTDSSVV----------MRL 166 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTN-NSIDQIRFSPRGR--IMRHKPQTATNTFG 215 +A+ + + L + Y ++ + N S+ + + R + Q + F Sbjct: 167 AVDSASYLDLAYVL-LPDDYRLRMTVSGQNLQSLFPANMTMQDLEWSQRIRRQEKSWKFE 225 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 Q I V+ + SD ++ E W+ DKY+ASV + + Sbjct: 226 NQYTSIYYKYSGDEVD-RLSDSKQEDKKTLEEPLHWVSFKDKYFASVLVCDSYFENNKLA 284 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIPR---FE 331 + + + Y + + L +S T F F G ++ + Y+K + + Sbjct: 285 QKTAAAGSDYLKNCTMSATFPLDVRSGTKARFTFFFGPLKYNMLRAYDKGMKAEDNLDLD 344 Query: 332 MLIDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 L+ G F +M++ ++ N+G+ I+L T+ +KLL PLA K Y+S+A Sbjct: 345 HLVYLGASIFRWINRYMIIPASTFLQQYFSNWGLIILLLTLGIKLLISPLAYKGYLSSAK 404 Query: 389 MKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 M+ ++P++ E+ K+ + + Q A + LY+ P++GC P+LLQ P A+Y Sbjct: 405 MRLLRPQVQEINAKYPGKDQESMMKRQSATMNLYRAAGAGPMSGCLPMLLQFPFLIAMYM 464 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQ 504 ++++R + W +DL++ D +F+ +P + HV ++ ++MS+S + Sbjct: 465 YFPTTIDIRQQS-FLWAEDLSSYD--AVFSWTADIPLLSQFYGNHVSLFCLLMSISNILY 521 Query: 505 MKMSPPPADKGQ--AMILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ + +D GQ +L WMP V+F+F + +GL Y+ S++I+++Q + + Sbjct: 522 IRYTMNQSDTGQEGMAMLKWMPYITTVMFLFFFNQNASGLCYYYFLSSIITVIQ-YMSSR 580 Query: 559 MHGAEIGLIDRLRSTFSK 576 E L+ +L + +K Sbjct: 581 FIINEEKLMAKLEANKTK 598 >gi|51598696|ref|YP_072884.1| putative inner membrane protein translocase component YidC [Borrelia garinii PBi] gi|81691561|sp|Q661H9|OXAA_BORGA RecName: Full=Inner membrane protein oxaA gi|51573267|gb|AAU07292.1| inner membrane protein [Borrelia garinii PBi] Length = 544 Score = 233 bits (595), Expect = 5e-59, Method: Composition-based stats. Identities = 127/520 (24%), Positives = 221/520 (42%), Gaps = 63/520 (12%) Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 ++ S + ++ + + L L+ + ++ L++ +F Sbjct: 64 DLINKSQNIVVETEIYFATFSTFRGNLVSLKLKNH---LNLEKDPTDLINVDYKNETFF- 119 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTP-TTPIKLVFKN-ANNILFERTISLDEHYLF 180 ++ V +L K + K FKN + + + E + Sbjct: 120 -----------DVSLDYLVEDLFLYKKIDNLNHEFKAYFKNHGKIYEYVKKYTFSEKNEY 168 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK------- 233 + TV NS + + + V I L DK+ ++ Sbjct: 169 LMKFTVIVNS-----------LNDYDLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQII 217 Query: 234 -YSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 Y + K +N W+G S KY+ V I + +FK + Sbjct: 218 YYDNKLKYGKDGLSINNPRWIGSSTKYFE-VLI--SRENMEVEFKKERGVLKSFIVNNVG 274 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKP 345 N+ I + F++AG K+ + ++K L+ F M ++ +Y I P Sbjct: 275 NKKNI------SDEFFIYAGPKDNRYLDIFDKSGDNTFGLSDIAFGMSVEKSLWYLIQVP 328 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 M M+M FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KFK Sbjct: 329 MQMVMQVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKH 388 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKD 464 P + L + M +LYK +NPL GC+P++LQ+P+FFA+Y +++ +R A F GWI D Sbjct: 389 DP-KKLNEEMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDD 447 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP----PPADKGQAMIL 520 L+ D F Y + + I P IM + +S Q + Sbjct: 448 LSIGDSVYNFGY----RLYFVSWTDIRILPFIMMFTQLGSTIVSSNLDLKNLGAQQKFLY 503 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 MP++F F L + P+GL+IYW +N+ +I+QQ I KMH Sbjct: 504 FGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYI-KMH 542 >gi|282890627|ref|ZP_06299150.1| hypothetical protein pah_c022o237 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499624|gb|EFB41920.1| hypothetical protein pah_c022o237 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 840 Score = 233 bits (594), Expect = 8e-59, Method: Composition-based stats. Identities = 109/462 (23%), Positives = 203/462 (43%), Gaps = 60/462 (12%) Query: 162 NANNILFERTISLDEH-----YLFKIVDTVTNNSIDQIRFS--PRGRIMRHKPQTATNTF 214 N N +T +L+E+ Y+F + +S S P I+ P A Sbjct: 396 NQNFRRITKTYTLEENEKNAPYVFNATIKIEGDSRGLWVGSGVPEVEIISGSPAPALKYR 455 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP--------- 265 ++G V+ +I+ W+ S+ + ++ P Sbjct: 456 ITRKGKSEVVSISPPS---------DAITVTSIFPDWICNSNGFLGTILDPLTEIDPGLR 506 Query: 266 ---SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS--ITTTNFLFAGAKEFPTIHH 320 S+ L R++A+ +T+LP KS T T +FAG + Sbjct: 507 VDHVSGVEVPSRLTILGQKTDRFKAQDLPGYVTLLPLKSSGGTATFRMFAGPFASNVLKT 566 Query: 321 YEKDLAIPRFEMLIDW-------GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTTV 369 + + P D+ GWF FI++P +F+LM +F+++ G++ +I+L TV Sbjct: 567 VDATFSNPETGYNPDYIACQSFHGWFSFISEPFAKFLFILMQFFHSVTGSWAFSIILLTV 626 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 ++++ +PL S M+ I P++ ++E+ K+ P + Q ++ LYK +NP++G Sbjct: 627 ALRVMLYPLNAWSTKSMLRMQQIAPEVKAIQERHKKDP-KKAQLEIMNLYKERGVNPVSG 685 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFM 488 C P+L+Q+P ++ ++ + E+R A F GWI +L A D +F+ LPF F Sbjct: 686 CLPLLIQMPFLIGMFDLLKSTFELRGASFIPGWIDNLTAPD--VLFSWQTPLPFIGNQF- 742 Query: 489 HVGIWPIIMSLSMFIQMK---------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 + PI++ + M++Q + ++ Q ++ N M VVF FP+GL Sbjct: 743 --HLLPILLGVVMWLQQRFMSAAPKDANQMTEQERQQRVMGNMMAVVFTVMFYQFPSGLN 800 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 IYW S ++ ++QQ + K E ++ + +K ++ Sbjct: 801 IYWLSSMLLGMLQQWWMGKKMKKETA---KILAAPAKGKETK 839 >gi|315023046|gb|EFT36059.1| OxaI/YidC membrane insertion protein [Riemerella anatipestifer RA-YM] Length = 596 Score = 232 bits (593), Expect = 9e-59, Method: Composition-based stats. Identities = 106/565 (18%), Positives = 223/565 (39%), Gaps = 52/565 (9%) Query: 1 MERN----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N + + + + ++ ++ E++ + T ++ +N A Sbjct: 2 MQQNNGLDKNQLIGFVVFTLFLLGVMLYFQK---QQTEQEQQQVATEQKAGATNNIVKAT 58 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL---NLRGYHLDVSSNSPIVTLLSP 113 + +A + +V LKN + + G Q L N + Y+ + N + L+ Sbjct: 59 NLPVKANEI---QKVSLKNDKISVEFSGLGGQISSLLMNNYKAYNKKTNQNDLPLYLIER 115 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 +N+ + + E+ + V+ + + + + + Sbjct: 116 NNSSYGF-----KFKDKSGKEINTKDLVFTPQ-----VNGNTVTMTSALNGGAVVQFIYT 165 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGFIAVLGDKSL 229 L + +++ V + I + + + F+ + Sbjct: 166 LKD---YQVDFQVATKGLSSIVSGGKASFVWNYTPKEQEKGRAQEQQHTEFVYAFNNYKS 222 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + ++S+ E +WL + +++ + I +K +S Y KF Sbjct: 223 TDYD----ARTSMDETKEVLNWLAVKQQFF-TPIIEAKNGFKNSTGHQDMIEEGEYLKKF 277 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 N + G + + + + ++K+ F+ +I GW FI + Sbjct: 278 DFNGELEITGGEFNQSFSWYFLPLDLKLLKTFDKN-----FDEIIPLGW-SFIGTMNCWI 331 Query: 350 MSYFYNLVGNFG----IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 YN++ ++G I L T+ VK++ P+ KQ+ +A MK I+P+I+E+ K K Sbjct: 332 FIPMYNMISSWGIAAGWVIFLMTILVKVVLSPIMYKQHKLSAMMKVIRPEIEEVNAKLKD 391 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + P Q+A++++Y+ +N LAGC P LLQIP+F+A+++ L++R FW DL Sbjct: 392 ADPMKKQQAVMEVYRKAGVNQLAGCLPALLQIPIFYALFRFFPNMLDLRGKGFWF-ATDL 450 Query: 466 AAADPTNIFTLFGILPFYL--PGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILN 521 A D ++ L +PF + +++ ++ M P ++ Sbjct: 451 TAYD--DLIKLPFHIPFLGEHISIFALACTAVLLIYTVMTAGNMQQPTQEGMPNMKPLMY 508 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSN 546 PV+F+F L+S +GL Y+ SN Sbjct: 509 IFPVMFLFFLNSAASGLSWYYFVSN 533 >gi|38502857|sp|O66103|OXAA_TREPA RecName: Full=Inner membrane protein oxaA gi|291060304|gb|ADD73039.1| inner membrane protein OxaA [Treponema pallidum subsp. pallidum str. Chicago] Length = 622 Score = 232 bits (593), Expect = 1e-58, Method: Composition-based stats. Identities = 114/590 (19%), Positives = 231/590 (39%), Gaps = 80/590 (13%) Query: 30 IEEMNNE-----RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINL 84 EE + + Q QP + V + + V ++ P + + Sbjct: 45 PEETRTQSAHGGAADTQETTQPAAHPSGQVLVFPESETEERVERTYV-VRTPLVQVTFTN 103 Query: 85 KGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNL 144 +G LR ++ V ++ + + F+ + PN N ++ + Sbjct: 104 RGGDILSYQLREHYAAQRRE--YVEMVEQARPDHRAFSL-----ALGDEYAPNVNALFQV 156 Query: 145 ISGKILTPTTPI----KLVFKNANN-----ILFERTISLDEHYLFKIVDTV--------- 186 I + ++A+ +L +R + ++Y+F++ ++ Sbjct: 157 KQEIGARGVHSIGFYRSVATQHADGTRTPFVLAKRYVFYPDNYMFELHVSLSADVLEERE 216 Query: 187 -------------TNNSIDQIRFS--------PRGRIMRHKPQTAT-----NTFGVQEGF 220 TN + +R P+ + + + Sbjct: 217 DSRQGAKVRAVAETNAGPATTVLARANGFDFGTASYTLRTPPEIGPERNAADKYEFRTFM 276 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + G ++ SW +S KY+A + +P+ S Sbjct: 277 VGAGGKAKTY-----ALKGDGREQVDTPVSWASVSGKYFALIVLPNDADSLKRLVLSAPQ 331 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEM------L 333 Q A + ++ ++ G + Y P E Sbjct: 332 AETAVQ-HHIAFVRRAVAQPAVADVYRVYIGPCAEQYLSAYNVASRNPYGLERTYIDAVA 390 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + G Y + + L+ FY L+ N+G+AI+L T+ +K+LFFPL K+ +++ M+ +Q Sbjct: 391 VSGGILYPLEVLLKWLLRLFYTLIPNWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQ 450 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P + ++E++K + Q + + M +LY+ NPL+GC P L+Q+P+ FA+Y++ + E Sbjct: 451 PHMQRIQERYKGN-TQKIHEEMAKLYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEF 509 Query: 454 RHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 R A F WI DL+ AD +++TL LP + + + + P++ +S + K++ P Sbjct: 510 RGAMFIPYWIPDLSLAD--SVWTLPFALP--VTQWTQMRMLPVLYVVSQIMFSKLTQVPH 565 Query: 513 DKGQA----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + Q ++ MP+ F F P+GL++YW+ N +++VQQ V+ + Sbjct: 566 TEQQKTSMTIMTYVMPLFFFFFFYDAPSGLLVYWTAMNGVTLVQQLVMKR 615 >gi|228470855|ref|ZP_04055702.1| putative membrane protein [Porphyromonas uenonis 60-3] gi|228307422|gb|EEK16432.1| putative membrane protein [Porphyromonas uenonis 60-3] Length = 626 Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats. Identities = 116/580 (20%), Positives = 231/580 (39%), Gaps = 51/580 (8%) Query: 26 VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM-----SPRVELKNPSLIG 80 P + + Q + A D A S + + N L Sbjct: 33 PTPATDTTQVATNAATAPAEEGQTTSDAAKPAPVDSLYAFSQLMAQSAKEYTMSNDKLSV 92 Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 + +GA L Y S +S V L +P + F + T N L + Sbjct: 93 TFTTQGAMPVSAELADYK---SYDSTQVRLFAPGD-----FVLNLPIRTNQNQILETKDL 144 Query: 141 VWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVT--------NNSID 192 +W + T + L +++ + T+ E Y+ + NN++ Sbjct: 145 IWQA--SQPNDSTLQMTLPIDSSSYLRIIYTM-PHEGYMLGMAIEAQGLGSLLHSNNAMQ 201 Query: 193 QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWL 252 + S RI R Q + F Q I VE K + + + + E W+ Sbjct: 202 DLEMSL--RIPR---QELSWKFENQYSTIYYKYPGDDVE-KLKETKMTQEKDVREKIQWV 255 Query: 253 GISDKYWASVFIPSKETSF--HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF-LF 309 + DK++++V I +T + Y + + NF LF Sbjct: 256 AMKDKFFSTVLIGLGDTRLEENKMSFTTEPKETNYIKDCKYQGAFAMDIRDGRKANFALF 315 Query: 310 AGAKEFPTIHHYEKDLAIPR---FEMLIDWG---WFYFIAKPMFMLMSYFYNLVGNFGIA 363 G ++ + + + + + +I G + + + L+++ + N+GI Sbjct: 316 MGPLDYNMLKSIDAGVDKAQRLDLKRMIYVGGSLFRWINVTLIRPLINFLQGFISNWGII 375 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYK 420 I+L T+ +KL+ PL K Y+S A M+ ++P+++ + K+ Q++ +A +QLY+ Sbjct: 376 ILLLTIIIKLVLSPLTFKSYLSQAKMRVLKPQVEAINAKYAGDDQQMMMKRSQATMQLYR 435 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +P++GC P+LLQ+P A+Y ++++R + W+KDL+ DP ++ Sbjct: 436 NAGASPMSGCLPMLLQMPFLIALYMFFPTAIDLRGES-FLWVKDLSTYDPIISWSTDIPF 494 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMP----VVFVFALSS 533 L G H+ ++ ++ +++ I + + A Q ++ +MP ++F +S Sbjct: 495 ITGLLGGNHISLFCLLWAVTNIIYSRYTMSMSGGASGSQMKMMRFMPYMMTIMFFIFFNS 554 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 AGL Y+ S +I+I+Q + ++ E ++ RL+ Sbjct: 555 NAAGLTYYYFISTLITILQ-FLASRLLINEDKVLARLQEN 593 >gi|313886342|ref|ZP_07820067.1| membrane protein insertase, YidC/Oxa1 family [Porphyromonas asaccharolytica PR426713P-I] gi|332300282|ref|YP_004442203.1| Membrane protein oxaA [Porphyromonas asaccharolytica DSM 20707] gi|312924211|gb|EFR34995.1| membrane protein insertase, YidC/Oxa1 family [Porphyromonas asaccharolytica PR426713P-I] gi|332177345|gb|AEE13035.1| Membrane protein oxaA [Porphyromonas asaccharolytica DSM 20707] Length = 626 Score = 232 bits (591), Expect = 2e-58, Method: Composition-based stats. Identities = 117/581 (20%), Positives = 234/581 (40%), Gaps = 51/581 (8%) Query: 32 EMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRV---ELKNPSLIGSINLKGAQ 88 ++ T + D A + A + MS V L+N L + + +GA Sbjct: 41 QVQTNTAVAATEESQTTSDAVKPAPVDSLYAFSQLMSQPVKEYTLQNEKLCVTFSTQGAM 100 Query: 89 FDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK 148 L Y +S +S V L +P + F + T N L + +W + Sbjct: 101 PVSAELADY---LSYDSTQVRLFAPGD-----FMLNLPIRTNQNQILETKDLIWQA--NQ 150 Query: 149 ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVT--------NNSIDQIRFSPRG 200 T + L +++ + T+ E Y+ + NN+I + S Sbjct: 151 PNDSTLLMTLPIDSSSYLRIIYTM-PHEGYMLGMAIEAQGLGSLLQSNNAIQDLEMSL-- 207 Query: 201 RIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYW 259 RI R + N + + + K + +E+ + E W+ + DK++ Sbjct: 208 RIPRQERSWKFENQYST---IYYKYPADDVEKLKETKMEQEK--DVREKIQWVAMKDKFF 262 Query: 260 ASVFIPSKETSFHS---QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFP 316 ++V I +T FK + + LF G ++ Sbjct: 263 STVLIGLGDTRLEGNKMSFKTEPKETDYIKVCNYKGSFAMDIRDGRKADFALFMGPLDYN 322 Query: 317 TIHHYEKDLAIPR---FEMLIDWG---WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 + + + + + +I G + + + L+ + + N+GI I+L T+ Sbjct: 323 MLKGMDAGVDKAQRLDLKRMIYVGGSLFRWINVTLIRPLIDFLQGFISNWGIIILLLTLI 382 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPL 427 +KL+ PL K Y+S A M+ ++P+++ + K+ Q++ +A +QLY+ +P+ Sbjct: 383 IKLVLSPLTFKSYMSQAKMRVLKPQVEAINAKYAGDDQQMMMKRSQATMQLYRNAGASPM 442 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 +GC P+LLQ+P A+Y ++++R + W+KDL+ DP ++ L G Sbjct: 443 SGCLPMLLQMPFLIALYMFFPTAIDLRGES-FLWVKDLSTYDPIISWSTDIPFITGLLGG 501 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMP----VVFVFALSSFPAGLII 540 H+ ++ ++ +++ I + + AD Q ++ +MP ++F +S AGL Sbjct: 502 NHISLFCLLWAVTNIIYSRYTMSMSAGADNSQMKMMRFMPYIMTIMFFIFFNSNAAGLTY 561 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 Y+ S +I+I+Q V ++ E ++ RL K + Sbjct: 562 YYFISTLITILQ-FVASRLLINEEKVLARLEENQRKPKKKK 601 >gi|188995310|ref|YP_001929562.1| putative inner membrane protein translocase component YidC [Porphyromonas gingivalis ATCC 33277] gi|254773011|sp|B2RKS0|OXAA_PORG3 RecName: Full=Inner membrane protein oxaA gi|188594990|dbj|BAG33965.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 627 Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats. Identities = 126/618 (20%), Positives = 254/618 (41%), Gaps = 62/618 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN-------QVDNSY 53 M+ N + + L ++++ + E + I+ +Q + + Sbjct: 1 MD--KNTVIGLVLIGLVIFGFSWLNRPDPQEIEAQRKAAIEAARQDSIAKAEAELLAART 58 Query: 54 AAVLIDDRAQALSMSP-------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 D QA + +VEL N + ++ KG ++ LR Y Sbjct: 59 QEATPDSIKQAAGYNQYGLLAAATAGAEEQVELANGKIALKLSTKGGAIREVLLRDYKT- 117 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELD--YVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 P+ + N LD V T + P S T +++ ++L Sbjct: 118 -YDGKPLYLFREGESDFNLPLRTLDNRLVDTRDLYFSPISRTDSSVV----------MRL 166 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTN-NSIDQIRFSPRGR--IMRHKPQTATNTFG 215 +A+ + + L + Y ++ + N S+ + + R + Q + F Sbjct: 167 AVDSASYLDLAYVL-LPDDYRLRMTVSGQNLQSLFPANMTMQDLEWSQRIRRQEKSWKFE 225 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 Q I V+ + SD ++ E W+ DKY+ASV + + Sbjct: 226 NQYTSIYYKYSGDEVD-RLSDSKQEDKKTLEEPLHWVSFKDKYFASVLVCDSYFENNKLA 284 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNF-LFAGAKEFPTIHHYEKDLAIPR---FE 331 + + + Y + + L + T F F G ++ + Y+K + + Sbjct: 285 QKTAAAGSDYLKNCTMSATFPLDVRPGTKAGFTFFFGPLKYNMLRAYDKGMKAEDNLDLD 344 Query: 332 MLIDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 L+ G F +M++ ++ N+G+ I+L T+ +KLL PLA K Y+S+A Sbjct: 345 HLVYLGASIFRWINRYMIIPASTFLQQYFSNWGLIILLLTLGIKLLISPLAYKGYLSSAK 404 Query: 389 MKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 M+ ++P++ E+ K+ + + Q A + LY+ P++GC P+LLQ P A+Y Sbjct: 405 MRLLRPQVQEINAKYPGKDQESMMKRQSATMNLYRAAGAGPMSGCLPMLLQFPFLIAMYM 464 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQ 504 ++++R + W +DL++ D +F+ +P + HV ++ ++MS+S + Sbjct: 465 YFPTTIDIRQQS-FLWAEDLSSYD--AVFSWTADIPLLSQFYGNHVSLFCLLMSISNILY 521 Query: 505 MKMSPPPADKGQ--AMILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ + +D GQ +L WMP V+F+F + +GL Y+ S++I+++Q + + Sbjct: 522 IRYTMNQSDTGQEGMAMLKWMPYITTVMFLFFFNQNASGLCYYYFLSSIITVIQ-YMSSR 580 Query: 559 MHGAEIGLIDRLRSTFSK 576 E L+ +L + +K Sbjct: 581 FIINEEKLMAKLEANKTK 598 >gi|115372258|ref|ZP_01459568.1| inner membrane protein, 60 kDa [Stigmatella aurantiaca DW4/3-1] gi|115370723|gb|EAU69648.1| inner membrane protein, 60 kDa [Stigmatella aurantiaca DW4/3-1] Length = 461 Score = 231 bits (589), Expect = 3e-58, Method: Composition-based stats. Identities = 108/450 (24%), Positives = 190/450 (42%), Gaps = 49/450 (10%) Query: 127 VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTV 186 VS LP + +G+ + + + +R + + V Sbjct: 16 VSIEGTSPLPANARYQVQEAGE-----GTVVFTTRRGPWEVVKRVQWPNAGHELTYTVQV 70 Query: 187 TNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS----LVEQKYSDI-EKSS 241 N S + R + H N F V + E+ + + E + Sbjct: 71 HNTSSQPLTGELR---VHHNRAIDPNFEHAPSFFGGVGNQSRAACHVGEKLHKRVPEDEA 127 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 F + GI +Y+ S+ P + + + F +T+ G++ Sbjct: 128 SETFSGPVHYFGIDQQYFLSMLYPLEAPREGHCVLTATPTVRQVAVGF---PLTVGAGET 184 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAI-----------PRFEMLIDWGWFYFIAKPMFMLM 350 +T + G K+ + + P E +D+G + I K + M Sbjct: 185 VTVRFGGWFGPKDPDLLKPVPSQEVLSAAGMTAAAWDPTIEETVDFGIWAVICKLLLFFM 244 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 +F+ + GN+G+AI+L TV VKL+ PL K V +K +QPK++E+R+KF + + Sbjct: 245 KWFHAVTGNWGVAIILLTVLVKLVLLPLTYKSMVGMEAVKELQPKMEEIRKKFAED-RER 303 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI-KDLAAAD 469 + +++LY+ +NPL GC P+L+Q+PV+ A++ + S ++ PF+G + +DL D Sbjct: 304 MNMEVMKLYQQAKVNPLGGCLPLLIQMPVWIALFTALRNSFDIYWEPFFGPVWRDLTYKD 363 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFV 528 PT + P+ + +SM I KM P D QA I+ W MP++F Sbjct: 364 PTYLL-------------------PLALGVSMIITQKMQPQMMDAAQARIMIWVMPIIFT 404 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 L +PAGL +Y +N++SI QQ + K Sbjct: 405 LTLLQYPAGLSLYIFTNNLLSIGQQWGLRK 434 >gi|329908682|ref|ZP_08274922.1| OxaI/YidC membrane insertion protein [Oxalobacteraceae bacterium IMCC9480] gi|327546632|gb|EGF31596.1| OxaI/YidC membrane insertion protein [Oxalobacteraceae bacterium IMCC9480] Length = 198 Score = 231 bits (588), Expect = 3e-58, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 135/210 (64%), Gaps = 20/210 (9%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M+ + ++GN+G I++ T+ +KL FFPL+ Y S A MK + PK+ +RE+FK P Q Sbjct: 1 MTQIHKILGNWGWTIIVLTMLIKLAFFPLSAASYRSMAKMKMVTPKMTAIRERFKSDP-Q 59 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +AM+ LYKT INPL GC PI++QIPVF ++Y V+ S+EMR+AP+ GWI+DLA+ D Sbjct: 60 KMNQAMMALYKTEKINPLGGCLPIVVQIPVFISLYWVLLASVEMRNAPWLGWIQDLASPD 119 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I P++M++SMF+Q K++P P D QA I+ +MP++F Sbjct: 120 PYYIL-------------------PVLMAVSMFVQTKLNPKPPDPMQAKIMMFMPIIFSV 160 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 FP+GL++YW +NV+SI QQ VI K Sbjct: 161 MFFFFPSGLVLYWVVNNVLSIAQQWVITKK 190 >gi|32475265|ref|NP_868259.1| 60 kDa inner-membrane protein homolog- part of a protein secretion system [Rhodopirellula baltica SH 1] gi|38502913|sp|Q7UFZ2|OXAA_RHOBA RecName: Full=Inner membrane protein oxaA gi|32445806|emb|CAD78537.1| 60 kDa inner-membrane protein homolog-putative part of a protein secretion system [Rhodopirellula baltica SH 1] Length = 827 Score = 231 bits (588), Expect = 4e-58, Method: Composition-based stats. Identities = 101/453 (22%), Positives = 181/453 (39%), Gaps = 59/453 (13%) Query: 162 NANNILFERTISLD-EHYLFKIVDTVTNN------------SIDQIRFSPRGRIMRHKPQ 208 + ++ +RT SL + Y + + N + I + P Sbjct: 308 SGKSVGLQRTYSLKPDSYSLDMDVQIDNRAEEAQELAYRIEGANGITLEGWWYSNKISPN 367 Query: 209 TATN------TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES------NSWLGISD 256 + EG V G L K +S S++G+ Sbjct: 368 WGGSAARDIVYKTTAEGHELVSGYALLKRAKNESEADDQTLFAPDSAPPARNLSYIGVDA 427 Query: 257 KYWASVFIPSKETSFHSQFKY--------------LSDGHARYQAKFSANEITILPGKSI 302 +Y+ +P + F+ + + + PG S+ Sbjct: 428 QYFTVAMLPPEGQESLKTFRRAAANIIADPSAVPDNKERAVNASFYLDSAIADVPPGSSL 487 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + LFAG K+ + Y I +GWF F+AKP+ L+ F N VGN+ + Sbjct: 488 KQSLRLFAGPKQPDVMEAY-------GLGDCIYYGWFSFVAKPLGGLLHLFSN-VGNYAL 539 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L T+ V+ L FPL++K ++ M+ + P++ ++ EK K + +A +L + Sbjct: 540 AIVLLTLCVRGLMFPLSRKAAINAQRMQELAPELKKIAEKHKDDMEARV-RAQRELQQRV 598 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRH---APFWGWIKDLAAADPTNIFTLFGI 479 NP+AGC P+ LQ+P+F +Y+ +S+ +E+R A + W +LAA D + + Sbjct: 599 GFNPMAGCAPMFLQLPIFIGLYRTLSVDIELRQAAFASWTTWASNLAAPDMMYYWGDWMW 658 Query: 480 LPFYLPGFMHVGIW----PIIMSLSMFIQMKMSPPP----ADKGQAMILNWMPVVFVFAL 531 G +G + P+I+ Q KM PP ++N+M +V Sbjct: 659 DYLGGRGTGWLGPYFNILPMIVVSLFLAQQKMFMPPATDEQTAMTQKMMNYMTLVMGLFF 718 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 PAGL IY+ S++ I ++ ++ K ++ Sbjct: 719 FRVPAGLCIYFITSSLWGIGERILVKKTLPSKP 751 >gi|313206272|ref|YP_004045449.1| protein translocase subunit yidc [Riemerella anatipestifer DSM 15868] gi|312445588|gb|ADQ81943.1| protein translocase subunit yidC [Riemerella anatipestifer DSM 15868] gi|325336286|gb|ADZ12560.1| YidC [Riemerella anatipestifer RA-GD] Length = 596 Score = 230 bits (587), Expect = 4e-58, Method: Composition-based stats. Identities = 106/565 (18%), Positives = 223/565 (39%), Gaps = 52/565 (9%) Query: 1 MERN----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N + + + + ++ ++ E++ + T ++ +N A Sbjct: 2 MQQNNGLDKNQLIGFVVFTLFLLGVMLYFQK---QQTGQEQQQVATEQKVGATNNIVKAT 58 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL---NLRGYHLDVSSNSPIVTLLSP 113 + +A + +V LKN + + G Q L N + Y+ + N + L+ Sbjct: 59 NLPVKANEI---QKVSLKNDKISVEFSGLGGQISSLLMNNYKAYNKKTNQNDLPLYLIER 115 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 +N+ + + E+ + V+ + + + + + Sbjct: 116 NNSSYGF-----KFKDKSGKEINTKDLVFTSQ-----VNGNTVTMTSVLNGGAIVQFIYT 165 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGFIAVLGDKSL 229 L + +++ V + I + + + F+ + Sbjct: 166 LKD---YQVDFQVATKGLSSIVSGDKASFVWNYTPKEQEKGRAQEQQHTEFVYAFNNYKS 222 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + ++S+ E +WL + +++ + I +K +S Y KF Sbjct: 223 TDYD----ARTSMDETKEVLNWLAVKQQFF-TPIIEAKNGFKNSTGHQDMIEEGEYLKKF 277 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 N + G + + + + ++K+ F+ +I GW FI + Sbjct: 278 DFNGELEITGGEFNQSFSWYFLPLDLKLLKTFDKN-----FDEIIPLGW-SFIGTMNRWI 331 Query: 350 MSYFYNLVGNFG----IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 YN++ ++G I L T+ VK++ P+ KQ+ +A MK I+P+I+E+ K K Sbjct: 332 FIPMYNMISSWGIAAGWVIFLMTILVKVVLSPIMYKQHKLSAMMKVIRPEIEEVNAKLKD 391 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + P Q+A++++Y+ +N LAGC P LLQIP+F+A+++ L++R FW DL Sbjct: 392 ADPMKKQQAVMEVYRKAGVNQLAGCLPALLQIPIFYALFRFFPNMLDLRGKGFWF-ATDL 450 Query: 466 AAADPTNIFTLFGILPFYL--PGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILN 521 A D ++ L +PF + +++ ++ M P ++ Sbjct: 451 TAYD--DLIKLPFHIPFLGEHISIFALACTAVLLIYTVMTAGNMQQPTQEGMPNMKPLMY 508 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSN 546 PV+F+F L+S +GL Y+ SN Sbjct: 509 IFPVMFLFFLNSAASGLSWYYFVSN 533 >gi|225620456|ref|YP_002721713.1| putative inner membrane protein [Brachyspira hyodysenteriae WA1] gi|225215275|gb|ACN84009.1| putative inner membrane protein [Brachyspira hyodysenteriae WA1] Length = 624 Score = 230 bits (587), Expect = 4e-58, Method: Composition-based stats. Identities = 122/612 (19%), Positives = 241/612 (39%), Gaps = 67/612 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ----------VD 50 M N +AI LS II++ + + N+ N Sbjct: 1 MSNNKRMVIAIGLSAIIMFLYMFYQAKTMKPVYNSNVSTNSNAVSNNNNITSENILLNTA 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY-HLDVSSNSPIVT 109 I++ ++ + ++ L+N +I + K L+ Y D+ +++ Sbjct: 61 QMQKIEKIENTNAVINDNEKI-LENEYVIATF--KNGSLYSYKLKNYYPQDLGADATNEI 117 Query: 110 L-LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 + + + Y + + + +N+I +P N + LI + + N + Sbjct: 118 IDMVEQVYEGIYPFTVTFQNLSNSIAIP-ENLDYQLIEESGDKVSYSANAIIDNTE-VKI 175 Query: 169 ERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL--- 224 +T + E Y K + N + + T+ ++E Sbjct: 176 TKTFTFGEDPYQLKNSVNIENVGEKDLSLFYSYFLATGIGPYRTDKNAIREDATKAQYLI 235 Query: 225 -GDKSLVEQKYSDIEKSSISN---------------------FHESNSWLGISDKYWASV 262 G+ DI K +I + + + W+ ++++Y+A + Sbjct: 236 KGNGKSKILLTGDIVKDNIFSRLFGFGNSSKGIKTNQMRYAIYEGEDKWVALNNRYFAII 295 Query: 263 FIPSK-ETSFHSQFKYLSDGHARYQAKF----SANEITILPGKSITTTNFLFAGAKEFPT 317 P++ + + Y+ F ++ TI G SIT +F G K T Sbjct: 296 SSPAQSNNTVFETMTFSKPSTNEYRNDFHVANLMSKHTIKSGSSITDNYSVFMGPKVRRT 355 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF----YNLVGNFGIAIMLTTVFVKL 373 Y + +E + + +P+ ++ YN+ N+ AI+L T KL Sbjct: 356 FSKYYLE---ESYESIFQESFLGLNLRPLTYILDVILNALYNITKNYAWAILLFTFLFKL 412 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 + FPL Y S M+ + PKI+ +RE++K +P + L ++ +YK INPL GC P+ Sbjct: 413 VTFPLNHASYKSMKKMQLVNPKIERIREQYKDNPDK-LNAEIMAIYKKEKINPLGGCLPM 471 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 LL P+ A + ++ +E+R+ P + WI DL++ D +F + G + ++ Sbjct: 472 LLPFPLLIAFFYLMQSMVELRNTP-FLWITDLSSPDKLFVFPAG----IPILGGFNFNLF 526 Query: 494 PIIMSLSMFIQMKMSP------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 PI+M+L+ ++ MK+ P A M+ P++ + +F +GL +YW+ N+ Sbjct: 527 PIVMALTSYLSMKLQPSSSAGNSSAAAQMKMMTTIFPLMMLLMFYNFASGLALYWTAQNI 586 Query: 548 ISIVQQAVIMKM 559 + QQ + K+ Sbjct: 587 FGVAQQFITSKI 598 >gi|327540380|gb|EGF26966.1| 60 kDa inner membrane insertion protein [Rhodopirellula baltica WH47] Length = 822 Score = 230 bits (587), Expect = 5e-58, Method: Composition-based stats. Identities = 101/453 (22%), Positives = 180/453 (39%), Gaps = 59/453 (13%) Query: 162 NANNILFERTISLD-EHYLFKIVDTVTNN------------SIDQIRFSPRGRIMRHKPQ 208 + ++ +RT SL Y + + N + I + P Sbjct: 303 SGKSVGLQRTYSLKPNSYSLDMDVQIDNRAEEAQELAYRIEGANGITLEGWWYSNKISPN 362 Query: 209 TATN------TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES------NSWLGISD 256 + EG V G L K +S S++G+ Sbjct: 363 WGGSAARDIVYKTTAEGHELVSGYALLKRAKNESEADDQTLFAPDSAPPARNLSYIGVDA 422 Query: 257 KYWASVFIPSKETSFHSQFKY--------------LSDGHARYQAKFSANEITILPGKSI 302 +Y+ +P + F+ + + + PG S+ Sbjct: 423 QYFTVAMLPPEGQESLKTFRRAAANIIADPSAVPDNKERAVNASFYLDSAIADVPPGSSL 482 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + LFAG K+ + Y I +GWF F+AKP+ L+ F N VGN+ + Sbjct: 483 KQSLRLFAGPKQPDVMEAY-------GLGDCIYYGWFSFVAKPLGGLLHLFSN-VGNYAL 534 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L T+ V+ L FPL++K ++ M+ + P++ ++ EK K + +A +L + Sbjct: 535 AIVLLTLCVRGLMFPLSRKAAINAQRMQELAPELKKIAEKHKDDMEARV-RAQRELQQRV 593 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRH---APFWGWIKDLAAADPTNIFTLFGI 479 NP+AGC P+ LQ+P+F +Y+ +S+ +E+R A + W +LAA D + + Sbjct: 594 GFNPMAGCAPMFLQLPIFIGLYRTLSVDIELRQAAFASWTAWASNLAAPDMMYYWGDWMW 653 Query: 480 LPFYLPGFMHVGIW----PIIMSLSMFIQMKMSPPP----ADKGQAMILNWMPVVFVFAL 531 G +G + P+I+ Q KM PP ++N+M +V Sbjct: 654 DYLGGRGTGWLGPYFNILPMIVVSLFLAQQKMFMPPATDEQTAMTQKMMNYMTLVMGLFF 713 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 PAGL IY+ S++ I ++ ++ K ++ Sbjct: 714 FRVPAGLCIYFITSSLWGIGERILVKKTLPSKP 746 >gi|261749487|ref|YP_003257173.1| putative inner membrane protein translocase component YidC [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497580|gb|ACX84030.1| putative inner membrane protein translocase component YidC [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 604 Score = 230 bits (586), Expect = 6e-58, Method: Composition-based stats. Identities = 117/536 (21%), Positives = 222/536 (41%), Gaps = 46/536 (8%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLRGYHL----DVSSNSPIVTLLSPSNTKNAYFAELDYV 127 L+N L I+ G D++ L+ Y +S N + + S F +V Sbjct: 64 VLENEVLRLRISSLGGMIDEVFLKKYKAYDFIHLSHNKNLYLIKDSSFLYKMIF----WV 119 Query: 128 STANNIELPNSNTVWNLISGKILTPTTP----IKLVFKNANNILFE-RTISLDEHYLFKI 182 ++ N T +L + + N + F +L E + + Sbjct: 120 NSNKKHSKKNLITTNSLYFHPFFFQKRGKLIILIMRAHNPYGVGFIDHIYTLSEGAQYHV 179 Query: 183 VDTV--TN----NSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 V N I + ++ K + N++ + Sbjct: 180 GFYVRTVNLFPFTGNKTISINLEQKVFSLEKDRNWENSYTQVYYSYKKNSHSKIQFLSEK 239 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN-EI 294 E+ +ISN + W+ +++A++FIP K + + + K +N + Sbjct: 240 KSEEKNISNLN----WVAYKQQFFATIFIPKKPLK-DCFIRSENFSSGVFLKKIQSNILL 294 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF-MLMSYF 353 I + + L+ G +F + +++ + + WG+ +I K F + + Sbjct: 295 KIKEHEEVNIPFQLYFGPLDFSLLKKFDQKIENI---IPFGWGFLKWINKYFFLEIFQFL 351 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 N+GI I+L T+ VKL+ P+ KQY +A MK I+P+IDE+ KF+ S P Q+ Sbjct: 352 EKTNLNYGIIIILMTIVVKLILSPITYKQYKLSAMMKLIRPEIDEINNKFRNSDPLKKQR 411 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 AM++LY+ INP++GC+ L QIP+F++++K + +R + W+ DL + D +I Sbjct: 412 AMMELYQKAGINPMSGCFSALFQIPIFYSLFKFFPTLINLRGKS-FLWVDDLTSYD--SI 468 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK----------MSPPPADKGQAMILNWM 523 L +PFY HV + ++ S ++ + K ++ IL M Sbjct: 469 LELPFSIPFYG---NHVSLLTLLYSFALLVYTKLSNNVGSNDTLNNQNNASDMPFILYLM 525 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 P++ + ++S+ +GL +Y+ SN+I+I I K E + +++ K Sbjct: 526 PLIMLLFINSYASGLSLYYFISNIINIGLIFFIKKFLLDENKIRQKIQENQKKPKK 581 >gi|38502850|sp|O51829|OXAA_BUCMP RecName: Full=Membrane protein oxaA gi|2754805|gb|AAC04234.1| inner membrane protein [Buchnera aphidicola (Myzus persicae)] Length = 240 Score = 229 bits (583), Expect = 1e-57, Method: Composition-based stats. Identities = 90/254 (35%), Positives = 149/254 (58%), Gaps = 26/254 (10%) Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+ G + + L P ++ +D+GW +F+++P+F L++ +++ N+G + Sbjct: 5 IKSKLWVGPEIQKEMK-----LVAPNLDLTVDYGWLWFLSQPLFKLLTIINSIINNWGFS 59 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T +K++ +PL K QYVS + ++ +QPKI E++E F + Q + + MI LYK Sbjct: 60 IILITFIMKIITYPLTKSQYVSMSKIRALQPKIKEIKEAFSDNK-QRISQEMIILYKKEK 118 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 INPL G P+ +Q+PVF ++Y ++ S+E+RHAPF WIKDL++ DP + Sbjct: 119 INPLGGFLPVFIQMPVFLSLYYMLIGSVELRHAPFVLWIKDLSSQDPFYVL--------- 169 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 PIIM L+MF K S +D Q I+N+MPV+F FP+GL++Y+ Sbjct: 170 ----------PIIMGLTMFFIQKTSSNNISDPIQKKIMNFMPVIFTVFFLWFPSGLVLYY 219 Query: 543 SWSNVISIVQQAVI 556 SN+++I+QQ I Sbjct: 220 IVSNLVTIIQQKFI 233 >gi|62185087|ref|YP_219872.1| putative inner membrane protein translocase component YidC [Chlamydophila abortus S26/3] gi|62148154|emb|CAH63911.1| putative lipoprotein [Chlamydophila abortus S26/3] Length = 794 Score = 227 bits (580), Expect = 3e-57, Method: Composition-based stats. Identities = 127/518 (24%), Positives = 222/518 (42%), Gaps = 71/518 (13%) Query: 114 SNTKNAYFAELD-YVSTANNIELPNSNTVWNLISGKILTPTTPIK------------LVF 160 S+T Y+ L + + + P S N++SG+ L P+ L Sbjct: 297 SDTIGGYYPLLRRGILSDSKKRTPASYHALNIVSGRDLVN--PVTSGYRVSVFNSNVLEL 354 Query: 161 KNANNILFERTISLDEH--YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNTFGV 216 ++ + ++T + E Y F++ + +S D I P+ +NTF Sbjct: 355 ESYDG-SIKKTYTFPEQQPYAFEVAVGLNRSSDDMW-------ITSGVPEVEIMSNTFSP 406 Query: 217 Q-EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVF-----IPS---- 266 + + L + K + W+ S+ Y+ + IP+ Sbjct: 407 AIKYRVIKKNKGQLDKVKLPKSKDPLSLRSGVYPQWILNSNGYFGIILSPLTDIPAGYAA 466 Query: 267 ---KETSFHSQFKYLSDGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHHY 321 S ++ L + Y A T+LP + T ++AG PT+ Sbjct: 467 AYVSGNSVPTRLSSLYPKNQAYPASKYPGYETLLPLPKEEGTYRFLVYAGPLAEPTLKAL 526 Query: 322 EKDLAIPRFEMLIDW------GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTTVFV 371 ++ P+ E G F FI +P +F++M +F + G++GI+I+L TVF+ Sbjct: 527 DRAYTNPKGENSQYLDCITFRGLFAFITEPFAALLFIIMKFFKMITGSWGISIILLTVFL 586 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 KLL +PL S M+ + P I E+++K+K P+ Q ++ LYKT+ +NP+ GC Sbjct: 587 KLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYK-KEPKRAQMEVMALYKTNKVNPITGCL 645 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 P+L+Q+P A++ ++ S +R A F GWI +L A D +T P + G Sbjct: 646 PLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWT----TPVWFIG-NEF 700 Query: 491 GIWPIIMSLSMFIQMKMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 + PI++ + MFIQ K+S + Q + M ++F F +FP+GL IYW Sbjct: 701 HLLPILLGVVMFIQQKLSALQKKGPVTDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWF 760 Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 S ++ ++QQ V K+ L++ + N Q Sbjct: 761 SSMLLGLIQQWVTNKILD-----RQHLKNEITVNKKKQ 793 >gi|330447274|ref|ZP_08310924.1| 60Kd inner membrane family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491465|dbj|GAA05421.1| 60Kd inner membrane family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 230 Score = 226 bits (577), Expect = 6e-57, Method: Composition-based stats. Identities = 97/240 (40%), Positives = 145/240 (60%), Gaps = 22/240 (9%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GW FIA P+ L+S + +VGN+G+AI++ T+ V+ L +PL K QY S A M+ +QP Sbjct: 12 DYGWSSFIANPLHDLLSLIHGVVGNWGVAIIILTLIVRGLMYPLTKAQYTSMAKMRMLQP 71 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 K+ LRE Q + + M+ LYK INPL GC P+LLQ+P+F A+Y V+++S E+R Sbjct: 72 KLQALRESCGDD-RQRMSQEMMALYKKEQINPLGGCLPLLLQMPIFIALYTVLNLSTELR 130 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-AD 513 +APF+GWI++L+A DP + PI+M +SMF K SP D Sbjct: 131 NAPFFGWIQNLSAQDPYYVL-------------------PILMGISMFFIQKNSPSTVTD 171 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 Q I+ +MPV+F FPAGL++YW SN+++++QQ +I + + GL R +S Sbjct: 172 PMQQKIMTFMPVIFTVFFLFFPAGLVLYWLTSNIVTLIQQTIIFRQLEVQ-GLHSRDKSK 230 >gi|29840233|ref|NP_829339.1| putative inner membrane protein translocase component YidC [Chlamydophila caviae GPIC] gi|34098398|sp|P59809|OXAA_CHLCV RecName: Full=Inner membrane protein oxaA gi|29834581|gb|AAP05217.1| inner membrane protein, putative [Chlamydophila caviae GPIC] Length = 794 Score = 226 bits (575), Expect = 1e-56, Method: Composition-based stats. Identities = 126/515 (24%), Positives = 216/515 (41%), Gaps = 65/515 (12%) Query: 114 SNTKNAYFAELD-YVSTANNIELPNSNTVWNLISGKILTPT----------TPIKLVFKN 162 S+T Y+ L + + P+S N++SG+ LT + L ++ Sbjct: 297 SDTVGGYYPLLRRGILSDAKKRTPSSYHALNIVSGRELTNSVASGYRVSTFNSTMLELES 356 Query: 163 ANNILFERTISLDEH--YLFKIVDTVTNNSIDQI--RFSPRGRIMRHKPQTATNTFGVQE 218 + ++T L + Y F++ V S D P IM + A Sbjct: 357 NDG-SIKKTYKLPQQQPYAFEVEVGVNRASDDLWITSGIPEVEIMSNAFTPAIK------ 409 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVF-----IPS------- 266 + L + K + W+ S+ Y+ + IP+ Sbjct: 410 YHVIKKNKGQLDKVKLPKAKDPLALRSGVYPQWILNSNGYFGIILSPLTDIPAGYAASYV 469 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHHYEKD 324 +S ++ LS + Y A T+LP K T ++AG PT+ +K Sbjct: 470 PGSSVPTRLSLLSPKNQAYPASKYPGYETLLPLPQKEGTHRFLVYAGPLADPTLRVLDKA 529 Query: 325 LAIPRFEMLIDW------GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374 + E G+F FI +P +F++M +F + G++GI+I+L TVF+KLL Sbjct: 530 YTNSKGESPQYLDCITFRGFFAFITEPFAALLFIIMKFFRMITGSWGISIILLTVFLKLL 589 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 +PL S M+ + P I E+++K+K P+ Q ++ LYKT+ +NP+ GC P+L Sbjct: 590 LYPLNAWSIRSMRRMQKLSPYIQEIQQKYK-KEPKRAQMEVMALYKTNKVNPITGCLPLL 648 Query: 435 LQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 +Q+P ++ ++ S +R A F GWI +L A D LF + Sbjct: 649 IQLPFLIVMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWTTPVWFLGNEFHLL 703 Query: 494 PIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 PI++ + MF Q K+S + Q + M ++F F +FP+GL IYW S Sbjct: 704 PILLGIVMFAQQKISASKKKGPATDQQRQQETMGTMMALLFTFMFYNFPSGLNIYWFSSM 763 Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 ++ ++QQ K+ ++ L++ S N Q Sbjct: 764 LLGLIQQWFTNKILDSK-----HLKNEISVNKKKQ 793 >gi|291514659|emb|CBK63869.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Alistipes shahii WAL 8301] Length = 648 Score = 225 bits (573), Expect = 2e-56, Method: Composition-based stats. Identities = 121/618 (19%), Positives = 239/618 (38%), Gaps = 70/618 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN------------- 47 M++ +A+ + + F + E + + V Sbjct: 1 MDKKSIIGIAVVAVL--FLGFAYFNSQQQKEYLEQKAAYEAYVDSVAAAARAAAPVADSL 58 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVE------------------LKNPSLIGSINLKGAQF 89 N A + A A +VE ++N + + +G Q Sbjct: 59 ASGNGVQAEVAAAEAAAAVRERQVETLGESLTAAREAEAEEFIVENDVMAVLFSTRGGQI 118 Query: 90 DDLNLRGYHL--DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWN---L 144 + L+ Y + ++ P+ + + + N+ + + V+ + Sbjct: 119 KGVTLKDYTQYGPRGKRDRKIEMMDPATAR--FGLSFYLKNGLKNVPVNTLDYVFTAQPV 176 Query: 145 ISGKILTPTTPIKLVFKNANNILFER----TISLDEHYLFKIVDTVTNNSIDQIRFSPRG 200 + + ++L + + T + + YL + N + + + Sbjct: 177 VGEADGAKSVVMRLPVAEGAYLEYRYLIYDTAAPERDYLVDFDVRLVNMAPEMANQTQIQ 236 Query: 201 RIMRHKPQTATNTF---GVQEGFIAVLGDK-SLVEQKYSDIEKSSISNFHESNSWLGISD 256 + F + D+ S+ E S+ KS N +W+ Sbjct: 237 IDWANTTFQNEKGFQNENMYTTLSYRFPDETSIEELGMSEGAKSK--NISTQVNWVAFKQ 294 Query: 257 KYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFP 316 ++++SVFI S+ + + + F+A ++ + G ++ Sbjct: 295 QFFSSVFIAPDNVSYANLAFDTAAPESSLLKTFTAQMGVPYTPQTEGYDFAFYFGPNKYS 354 Query: 317 TIHHYEK-DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF----GIAIMLTTVFV 371 + + A E L+ GW F + ++ F + + N+ GI I + + V Sbjct: 355 ILKKIGEPGGADIYLERLVPLGWGIFGWVNRWCVIPVF-DFLRNYIGSFGIIIFILVLLV 413 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGC 430 KL+ PL K YVS A M+ ++P+IDEL +K+ K Q+A ++LYK INP+ GC Sbjct: 414 KLVISPLTYKSYVSMAKMRLVKPQIDELAKKYPKPEDAMKKQQATMELYKKAGINPMGGC 473 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 P+L+Q+P+ A+++ S+E+R P + W DL++ D +I L +PFY HV Sbjct: 474 IPMLIQMPILIAMFRFFPASIELREQP-FLWADDLSSYD--SIVNLPFSIPFYGD---HV 527 Query: 491 GIWPIIMSLSMF------IQMKMSPPPADKGQAM-ILNWMPVVFVFALSSFPAGLIIYWS 543 ++ ++M++S+F Q S P G ++ MP++ +F +S+ +GL Y+ Sbjct: 528 SLFALLMAVSLFGYSWFNYQQTASSQPQMAGMKFMMVYMMPIMMLFWFNSYSSGLCYYYL 587 Query: 544 WSNVISIVQQAVIMKMHG 561 SN+ +I Q VI +M Sbjct: 588 LSNIFTIGQTLVIRRMVD 605 >gi|329942824|ref|ZP_08291603.1| 60Kd inner membrane family protein [Chlamydophila psittaci Cal10] gi|332287416|ref|YP_004422317.1| putative inner membrane protein translocase component YidC [Chlamydophila psittaci 6BC] gi|313847996|emb|CBY16993.1| putative lipoprotein [Chlamydophila psittaci RD1] gi|325506880|gb|ADZ18518.1| putative inner membrane protein translocase component YidC [Chlamydophila psittaci 6BC] gi|328815084|gb|EGF85073.1| 60Kd inner membrane family protein [Chlamydophila psittaci Cal10] gi|328914664|gb|AEB55497.1| Inner membrane protein oxaA [Chlamydophila psittaci 6BC] Length = 794 Score = 224 bits (572), Expect = 3e-56, Method: Composition-based stats. Identities = 127/513 (24%), Positives = 223/513 (43%), Gaps = 61/513 (11%) Query: 114 SNTKNAYFAELD-YVSTANNIELPNSNTVWNLISGKILTP--TTPIKLVFKNANNIL--- 167 S+T Y+ L + + + P S N++SG+ L + ++ N N + Sbjct: 297 SDTVGGYYPLLRRGILSDSKKRTPASYHALNIVSGRDLVNPVASGYRVSVFNGNVLELES 356 Query: 168 ----FERTISLDEH--YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ-EGF 220 ++T +L E Y F++ + N S D I + + + +NTF + Sbjct: 357 YDGSIKKTYTLPEQQPYAFEVAVGL-NRSSDDIWITS----GVPEVEIMSNTFSPAIKYR 411 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVF-----IPS-------KE 268 + L + K + W+ S+ Y+ + IP+ Sbjct: 412 VIKKNKGQLDKVKLPKSKDPLSLRSGIYPQWILNSNGYFGIILSPLTDIPAGYAAAYVSG 471 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHHYEKDLA 326 S ++ L + Y A T+LP + T ++AG PT+ ++ Sbjct: 472 NSVPTRLSLLYPKNQAYPASKYPGYETLLPLPKEEGTYRFLVYAGPLAEPTLKALDQAYT 531 Query: 327 IPRFEMLIDW------GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 P E G F FI +P +F++M +F + G++GI+I+L TVF+KLL + Sbjct: 532 NPNGENPQYLDCITFRGLFAFITEPFAALLFIIMKFFKMITGSWGISIILLTVFLKLLLY 591 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 PL S M+ + P I E+++K+K P+ Q ++ LYKT+ +NP+ GC P+L+Q Sbjct: 592 PLNAWSIRSMRRMQKLSPYIQEIQQKYK-KEPKRAQMEVMALYKTNKVNPITGCLPLLIQ 650 Query: 437 IPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 +P A++ ++ S +R A F GWI +L A D +T P + G + PI Sbjct: 651 LPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWT----TPVWFIG-NEFHLLPI 705 Query: 496 IMSLSMFIQMKMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 ++ + MF+Q K+S + Q + M ++F F +FP+GL IYW S ++ Sbjct: 706 LLGIVMFVQQKLSALKKKGPVTDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLL 765 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 ++QQ V K+ L++ + N Q Sbjct: 766 GLIQQWVTNKILD-----RQHLKNEITVNKKKQ 793 >gi|261416142|ref|YP_003249825.1| membrane protein insertase, YidC/Oxa1 family [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372598|gb|ACX75343.1| membrane protein insertase, YidC/Oxa1 family [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327500|gb|ADL26701.1| inner membrane protein, 60 kDa [Fibrobacter succinogenes subsp. succinogenes S85] Length = 616 Score = 224 bits (571), Expect = 3e-56, Method: Composition-based stats. Identities = 120/628 (19%), Positives = 240/628 (38%), Gaps = 80/628 (12%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPR-------------IEEMNNERKNIQTVKQPNQVD 50 N N + L +IV W E + +++ P++ Sbjct: 2 NKNTLIGSILIAVIVIWWMAVNNANAEAQAAARAAQAKAKTEKQVAADSAKSLVIPSKTP 61 Query: 51 NSYAAVLI----------DDRAQALSMSPR-------VELKNPSLIGSINLKGAQFDDLN 93 AA ++ D+ + ++P+ V ++ I ++ KGA+ + Sbjct: 62 EIKAAPVLGGTDERRETKDESVDSAKVAPKAEIAERSVTVETDKFIMTLTNKGAKVKSII 121 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT-P 152 ++ P ++ D +N +L + KI+ Sbjct: 122 VKALPDSTGK--------FPELIQDTTLGAFDL--KLDNADLSEAMFELGNTPAKIVVND 171 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ--IRFSPRGRIMRHKPQTA 210 + ++ F++AN R+ + + + +G + + Sbjct: 172 SAKVQFAFQDANGNQVIRSYGFTKEGP-AVRQENKFIGFQPTAYELAWKGGLKETEDIPK 230 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYS---DIEKSSISNFHESNS--WLGISDKYWASVFIP 265 + G + + +YS ++ + S W G+ KY A Sbjct: 231 SKGIMGIGGGGTYYFSEVVFNDRYSVEREMPREQASFNATEGKIVWAGLRRKYVAMTVQF 290 Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + + K + + I + + + L ++ + KD Sbjct: 291 DEAVPAVLKTKPMKVEDSEVDPGTYKLTIADDFRGAQSLSYDLMILPLKWDELSALNKD- 349 Query: 326 AIPRFEMLIDWGW--------FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 +E +I GW F +I K + L++ FY+++ N+G+AI+L T+ V+ + P Sbjct: 350 ----YEKIIVSGWSWCGADVWFVWICKMLLKLLNLFYSIIPNYGVAIILVTLIVRGVTTP 405 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL----AGCWPI 433 KQ ST M ++P++DE+ K++ P Q Q AM++LY +NINPL GC P+ Sbjct: 406 FTVKQIKSTRGMAALKPQLDEINVKYRTDP-QKKQAAMMELYSKNNINPLASCTGGCLPM 464 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+F ++ V+ ++E+R AP + WI DL+ +D + +P +P + + W Sbjct: 465 LIQMPIFMGLFFVLGRAIELRGAPAFLWISDLSRSD---VVWNGISIPIIMPSGLAILPW 521 Query: 494 PIIMSLSMFIQMKMSPPPADKG----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 +M + + Q K++ Q M++ MP + + + P+GL++YW N+ S Sbjct: 522 --LMVATTYFQTKVTMGANAGMDPAQQKMMVWMMPAMMLLFSAVMPSGLVLYWIIGNIWS 579 Query: 550 IVQQAVIMKM----HGAEIGLIDRLRST 573 I Q I +G + +L+ Sbjct: 580 IAQYKYIYSKFPPVNGNKPAASSKLKGK 607 >gi|296126151|ref|YP_003633403.1| membrane protein insertase, YidC/Oxa1 family [Brachyspira murdochii DSM 12563] gi|296017967|gb|ADG71204.1| membrane protein insertase, YidC/Oxa1 family [Brachyspira murdochii DSM 12563] Length = 626 Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats. Identities = 127/616 (20%), Positives = 246/616 (39%), Gaps = 72/616 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV----------- 49 M N +A AL+ II++ + FY ++ + + + + N Sbjct: 1 MSNNKRMVIAFALTAIILFIY-MFYQSKVMKPVYSSNTSTNSAAASNNNIENNNNTANYL 59 Query: 50 --DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY-HLDVSSNSP 106 + + LS++ L+N +I + K L+ Y D+ ++ Sbjct: 60 LDTAQMQNFAVIEDTNTLSLNNEKILENEYVIAAF--KNGSLFSYKLKNYYPQDLGKDAT 117 Query: 107 IVTL-LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 + + + Y + + + +N+I +P N + LIS + L + Sbjct: 118 NEIIDMVEQVYEGIYPFTVTFQNLSNSIAMP-ENLNYQLISNDNNDLVSYSALALIDNVP 176 Query: 166 ILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + +T S E Y K T+ N + + T+ V+E Sbjct: 177 VRITKTFSFGEDPYQLKNSVTIENIGEKDLSLFYSYFLGTGIGPYRTDKNSVREDATKAQ 236 Query: 225 ----GDKSLVEQKYSDIEKSSI-------------------SNFHESNSWLGISDKYWAS 261 G+ DI K +I S + + W ++++Y+ Sbjct: 237 YLIKGNGKSKILLTGDIVKDNIFSRLFGSSSRGIKTNQMRYSVYEGLDKWAALNNRYF-- 294 Query: 262 VFIPSKETSFHSQFKYL---SDGHARYQAKF----SANEITILPGKSITTTNFLFAGAKE 314 I S ++ F+ + Y+ F ++ +I G SIT T +F G K Sbjct: 295 AIISSSAQPDNTVFETMTFSKPSTNEYRNDFHLANLVSKHSIKSGSSITDTYSVFMGPKV 354 Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM----SYFYNLVGNFGIAIMLTTVF 370 Y + +E + + +P+ ++ + YN+ N+ AI+L T+ Sbjct: 355 RRLFSKYYAE---ESYESIFQESFLGINLRPLTYILDIMLNGLYNITKNYAWAILLFTLL 411 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 K++ FPL Y S M+ + PKI+ +RE++K +P + L ++ +YK INPL GC Sbjct: 412 FKIITFPLNNASYKSMKKMQLVNPKIERIREQYKDNPDK-LNAEIMAIYKKEKINPLGGC 470 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 P+LL P+ A + ++ +E+R+ P + WI DL++ D +F + G + Sbjct: 471 LPMLLPFPLLIAFFYLMQSMVELRNTP-FLWITDLSSPDRLFVFPAG----MPILGGFNF 525 Query: 491 GIWPIIMSLSMFIQMKMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 ++PI+M+++ ++ MK+ P A M+ P++ + +F +GL +YW+ Sbjct: 526 NLFPILMAVTSYLSMKLQPSSSAGGSSSAAAQMKMMTTIFPLIMLLMFYNFASGLALYWT 585 Query: 544 WSNVISIVQQAVIMKM 559 NV + QQ + K+ Sbjct: 586 AQNVFGVAQQFITSKL 601 >gi|262340996|ref|YP_003283851.1| putative inner membrane protein translocase component YidC [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272333|gb|ACY40241.1| putative inner membrane protein translocase component YidC [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 580 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 118/532 (22%), Positives = 232/532 (43%), Gaps = 56/532 (10%) Query: 73 LKNPSLIGSINLKGAQFDDLNLRGYHL---DVSSNSPIVTLLSPSNT--KNAYFAELDYV 127 L+N L I+ G +++ L+ Y + +S + L+ S+ K ++ + Sbjct: 67 LENNVLRLKISNVGGMINEVLLKKYKAYDASLLHHSKNLFLIKNSSFLYKMSFSNKKGLN 126 Query: 128 STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN-ILFERTISLDEHYLFKIVDTV 186 N+ +IL + N + + TI + Y Sbjct: 127 IDTTNLLFQPFLFENQKKRIQILIMRAKNP--YGNGKGFLDYIYTIGKNNQYDIGFSVRT 184 Query: 187 TNNSIDQIRFSPRGRIMR----------HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 N F P +++ K + N++ + S+ Sbjct: 185 IN-------FYPFKKLVSINLEQKILSLEKDRNWENSYTQVYYSVLNKNSVSVKHLSEKK 237 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKE-TSFHSQFKYLSDGHARYQAKFSANEIT 295 E+++ISN + W+ +++AS+F+P K+ + + + S G++ +F + Sbjct: 238 TEETNISNMN----WIAHKQQFFASIFVPEKKFQNIFVRSENFSSGNSLKNIQFKT-LMN 292 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY--FIAKPMFMLMSYF 353 + I + + G +F + Y+ FE +I +GW + +I K F+++ F Sbjct: 293 ANKNEEIHFSFRFYFGPLDFNLLKGYKN-----GFENIIPFGWGFLKWINKYFFLIIFQF 347 Query: 354 YNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-VL 411 N+G+ I+L T VKL+ +P+ KQY +A MK I+P+++EL K+K + Sbjct: 348 LEQTSLNYGVIIILMTFVVKLILYPITYKQYKLSAIMKLIRPEVEELNNKYKNNEDAFKK 407 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 QKAM++LYK INP++GC L QIP+F++++K L +R + W++DL + D Sbjct: 408 QKAMMELYKKVGINPMSGCISTLFQIPIFYSLFKFFPTLLNLRGKS-FLWVEDLTSYD-- 464 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD----------KGQAMILN 521 +I L +PFY H+ + ++ +L++ + K+S + IL Sbjct: 465 SILELPFFIPFYG---NHISLLTLLYALALLVYTKLSNNEKKDISQNENGTIPDMSFILY 521 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 MPV+ + ++S+ + L +Y+ SN+I+I I + E ++ +++ Sbjct: 522 LMPVIMLLFINSYASALSLYYFTSNIINIGFLFFIKEFMLDEKKILIKIQEN 573 >gi|195953256|ref|YP_002121546.1| 60 kDa inner membrane insertion protein [Hydrogenobaculum sp. Y04AAS1] gi|195932868|gb|ACG57568.1| 60 kDa inner membrane insertion protein [Hydrogenobaculum sp. Y04AAS1] Length = 514 Score = 220 bits (561), Expect = 5e-55, Method: Composition-based stats. Identities = 120/565 (21%), Positives = 230/565 (40%), Gaps = 75/565 (13%) Query: 1 MER-NWNYFVAIALSVII-VYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVD-NSY 53 ME+ + +AI +V I + A+Q F+ P + + K + Sbjct: 1 MEQIDLKRLIAIFFAVSITILAYQYITEYFFKSPTVTTPQQKAKKTTANQAIFTYQYQGG 60 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + ++++ Q + V L G + ++ + + L++P Sbjct: 61 INLFLNNQRQTQDIQNGVLLHFKDADVKFAYNGGRITYYYIKNFKQN---------LITP 111 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 F Y P+ + N + I + + K N I + IS Sbjct: 112 QEYALKVFPLEVYTGN------PSIDEAINFSNYNISVTNNNVVMTLKLPN-ISVVKDIS 164 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 D+ +V+ ++ F G +G + + + + Sbjct: 165 FDKEGFIS-KISVSLIGYNKPYFVMIGN------NLNEEDLHTHQGPVFDINEN-VKRLD 216 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 DI+ + + S+ G +++ + R Sbjct: 217 NDDIKTYKV--ITGNISFAGEESRFFF--------QGIKGHINSIQIYKERLGKDDFTFM 266 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + G +F G KE+ + ++D+G F + +P+F + + Sbjct: 267 LVSFDG-----KALMFFGPKEYDLLKK-------ANLTDVLDFGDFRIVVEPLFKFLYFI 314 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y GN+ I+I + T+ +++LFFPL K +S + + + PK+++++EK+K P + +Q+ Sbjct: 315 YIKTGNWIISIFVLTLLIRILFFPLNYKSTLSMSKLSEVAPKMEKIKEKYKDDPVK-MQE 373 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 +++LYK NP +GC PIL+QIP+FF++YKVI I+ +++ A + WI DL DP I Sbjct: 374 EIMKLYKEVGFNPASGCLPILVQIPIFFSLYKVIVITADLKLA-HFLWIHDLTQKDPYYI 432 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 PI+M ++M + ++++P P D Q I+ + FVF +S Sbjct: 433 L-------------------PILMGITMIMSLRLTPNP-DPRQNSIMYISSLFFVFLFAS 472 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FPA L+IYW+ +N++S +Q +I K Sbjct: 473 FPAALVIYWTINNILSFLQTYLIRK 497 >gi|218262804|ref|ZP_03477162.1| hypothetical protein PRABACTJOHN_02842 [Parabacteroides johnsonii DSM 18315] gi|218223099|gb|EEC95749.1| hypothetical protein PRABACTJOHN_02842 [Parabacteroides johnsonii DSM 18315] Length = 559 Score = 219 bits (558), Expect = 1e-54, Method: Composition-based stats. Identities = 113/564 (20%), Positives = 213/564 (37%), Gaps = 68/564 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYA 54 M+ N + L +++ + + P E++ +R I+ KQ Q Sbjct: 1 MD--KNTIIGFLLIGVVLIVF-TWLNQPTPEQIEAQRRMQDSIAQIEYAKQLEQQKELNR 57 Query: 55 AVLIDDRAQALSMSPRVE---------------------LKNPSLIGSINLKGAQFDDLN 93 DD L S R+ L+N + + KG + + Sbjct: 58 EAKADDELAGLPDSVRLARLQNTFGVFADAMVGEEGSTVLENELVEVRLANKGGRVGYVR 117 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ Y D P+V L ++K + + TA+N + + + + G Sbjct: 118 LKKY--DNYKGEPLV-LFDEKDSKFDF-----TLITADNRVVNTGDLYFTPVKGN---DQ 166 Query: 154 TPIKLVFKNANNILFERTISLD-EHYL--FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210 I + + SL + Y+ F I T N + + + Q Sbjct: 167 NSITMRLNTGEGSHLDFIYSLKPDDYMLQFSIKGTGLNGVLSPGTTALDLLWQQKITQQE 226 Query: 211 TNTFGVQEGFIAVL----GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 D + + K+ W+ D Y++S+ I Sbjct: 227 KGRKFEDRYATVYYKFMADDVEYLSET-----KNDSKQLSNRLKWVAYKDMYFSSILIAG 281 Query: 267 KETSFHSQFKY---LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 E + DG + K + + L G T + G +F + Y+ Sbjct: 282 NEGFESTTIDSKMLPEDGSFLKEYKTTTSVPFDLKGNEAT-DMRFYFGPNQFSLLKSYDD 340 Query: 324 DLAIPR---FEMLIDWGWFYFIAKPMFMLM---SYFYNLVGNFGIAIMLTTVFVKLLFFP 377 D+ E ++ GW F + ++ ++ + ++G+ I L TV VKL+ FP Sbjct: 341 DVEKADQLDLEKIVPLGWGIFRWVNQYFVIPLFNFLGQFIHSYGLLIFLLTVIVKLILFP 400 Query: 378 LAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 L K Y+S+A M+ ++P+++EL K+ Q Q+A ++LY +P+AGC P+LLQ Sbjct: 401 LTYKSYMSSAKMRVLRPQVEELNAKYPGQDKAVERQRATMELYSRAGASPMAGCVPMLLQ 460 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIWPI 495 +P+ A++ ++E+RH + W DL+ D I + +P P F H+ ++ + Sbjct: 461 MPILVALFMFFPSAIELRHQS-FLWAHDLSTYD--AIVSWNTYIPIITPYFGNHISLFCL 517 Query: 496 IMSLSMFIQMKMSPPPADKGQAMI 519 +M+++ I K + + GQ + Sbjct: 518 LMTVTNIIYTKFNMEQTNTGQQQM 541 >gi|296435767|gb|ADH17941.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis G/9768] gi|296436691|gb|ADH18861.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis G/11222] gi|297140126|gb|ADH96884.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis G/9301] Length = 785 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 116/443 (26%), Positives = 194/443 (43%), Gaps = 50/443 (11%) Query: 157 KLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNT 213 L+ ++ + RT SL E Y F++ T D I P+ +N Sbjct: 345 TLILESGDG-GIRRTYSLGEQPYAFELEIQTTQGREDLW-------ITSGVPEVEIMSNA 396 Query: 214 FGVQEGFIAVLGDKS-LVEQKYSDIEKSSISNFHESNSWLGISDKYW------------- 259 F + AV +KS L K + S + + + W+ S+ Y+ Sbjct: 397 FVPAVKYHAVKKNKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAG 456 Query: 260 -ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 AS FIP D + LP ++ ++AG PT+ Sbjct: 457 YASSFIPGNVVPTRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTL 516 Query: 319 HHYEKDLAI-----PRFEMLIDW-GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTT 368 ++ A P + I + G+F FI +P +F++M +F L G++GI+I+L T Sbjct: 517 KALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLT 576 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KLL +PL S M+ + P I E+++K+K+ P+ Q ++ LYK + +NP+ Sbjct: 577 IVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKR-EPKRAQMEIMALYKMNKVNPIT 635 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+QIP A++ ++ S +R A F GWI +L A D LF Sbjct: 636 GCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWETPIWFIG 690 Query: 488 MHVGIWPIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + PI++ + MF Q K+S + Q + M ++F F +FP+GL I Sbjct: 691 KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNI 750 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW S ++ ++QQ V K+ + Sbjct: 751 YWFSSMLLGVIQQWVTNKILDEK 773 >gi|76788973|ref|YP_328059.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis A/HAR-13] gi|237802674|ref|YP_002887868.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis B/Jali20/OT] gi|76167503|gb|AAX50511.1| 60 kDa inner membrane protein [Chlamydia trachomatis A/HAR-13] gi|231273908|emb|CAX10700.1| inner membrane protein [Chlamydia trachomatis B/Jali20/OT] gi|296437627|gb|ADH19788.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis G/11074] Length = 787 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 116/443 (26%), Positives = 194/443 (43%), Gaps = 50/443 (11%) Query: 157 KLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNT 213 L+ ++ + RT SL E Y F++ T D I P+ +N Sbjct: 347 TLILESGDG-GIRRTYSLGEQPYAFELEIQTTQGREDLW-------ITSGVPEVEIMSNA 398 Query: 214 FGVQEGFIAVLGDKS-LVEQKYSDIEKSSISNFHESNSWLGISDKYW------------- 259 F + AV +KS L K + S + + + W+ S+ Y+ Sbjct: 399 FVPAVKYHAVKKNKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAG 458 Query: 260 -ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 AS FIP D + LP ++ ++AG PT+ Sbjct: 459 YASSFIPGNVVPTRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTL 518 Query: 319 HHYEKDLAI-----PRFEMLIDW-GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTT 368 ++ A P + I + G+F FI +P +F++M +F L G++GI+I+L T Sbjct: 519 KALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLT 578 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KLL +PL S M+ + P I E+++K+K+ P+ Q ++ LYK + +NP+ Sbjct: 579 IVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKR-EPKRAQMEIMALYKMNKVNPIT 637 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+QIP A++ ++ S +R A F GWI +L A D LF Sbjct: 638 GCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWETPIWFIG 692 Query: 488 MHVGIWPIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + PI++ + MF Q K+S + Q + M ++F F +FP+GL I Sbjct: 693 KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNI 752 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW S ++ ++QQ V K+ + Sbjct: 753 YWFSSMLLGVIQQWVTNKILDEK 775 >gi|15604972|ref|NP_219756.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis D/UW-3/CX] gi|38502864|sp|O84253|OXAA_CHLTR RecName: Full=Inner membrane protein oxaA gi|3328662|gb|AAC67844.1| 60kDa Inner Membrane Protein [Chlamydia trachomatis D/UW-3/CX] gi|297748381|gb|ADI50927.1| 60 kDa inner membrane protein YIDC [Chlamydia trachomatis D-EC] gi|297749261|gb|ADI51939.1| 60 kDa inner membrane protein YIDC [Chlamydia trachomatis D-LC] Length = 787 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 116/443 (26%), Positives = 194/443 (43%), Gaps = 50/443 (11%) Query: 157 KLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNT 213 L+ ++ + RT SL E Y F++ T D I P+ +N Sbjct: 347 TLILESGDG-GIRRTYSLGEQPYAFELEIQTTQGREDLW-------ITSGVPEVEIMSNA 398 Query: 214 FGVQEGFIAVLGDKS-LVEQKYSDIEKSSISNFHESNSWLGISDKYW------------- 259 F + AV +KS L K + S + + + W+ S+ Y+ Sbjct: 399 FVPAVKYHAVKKNKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRIPIPAG 458 Query: 260 -ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 AS FIP D + LP ++ ++AG PT+ Sbjct: 459 YASSFIPGNVVPTRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTL 518 Query: 319 HHYEKDLAI-----PRFEMLIDW-GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTT 368 ++ A P + I + G+F FI +P +F++M +F L G++GI+I+L T Sbjct: 519 KALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLT 578 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KLL +PL S M+ + P I E+++K+K+ P+ Q ++ LYK + +NP+ Sbjct: 579 IVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKR-EPKRAQMEIMALYKMNKVNPIT 637 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+QIP A++ ++ S +R A F GWI +L A D LF Sbjct: 638 GCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWETPIWFIG 692 Query: 488 MHVGIWPIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + PI++ + MF Q K+S + Q + M ++F F +FP+GL I Sbjct: 693 KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNI 752 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW S ++ ++QQ V K+ + Sbjct: 753 YWFSSMLLGVIQQWVTNKILDEK 775 >gi|255317353|ref|ZP_05358599.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis 6276s] Length = 785 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 115/443 (25%), Positives = 194/443 (43%), Gaps = 50/443 (11%) Query: 157 KLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNT 213 L+ ++ + +T SL E Y F++ T D I P+ +N Sbjct: 345 TLILESGDG-GIRKTYSLGEQPYAFELEIQTTQGREDLW-------ITSGVPEVEIMSNA 396 Query: 214 FGVQEGFIAVLGDKS-LVEQKYSDIEKSSISNFHESNSWLGISDKYW------------- 259 F + AV +KS L K + S + + + W+ S+ Y+ Sbjct: 397 FVPAVKYHAVKKNKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAG 456 Query: 260 -ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 AS FIP D + LP ++ ++AG PT+ Sbjct: 457 YASSFIPGNVVPTRLSQLPPKDQTYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTL 516 Query: 319 HHYEKDLAI-----PRFEMLIDW-GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTT 368 ++ A P + I + G+F FI +P +F++M +F L G++GI+I+L T Sbjct: 517 KALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLT 576 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KLL +PL S M+ + P I E+++K+K+ P+ Q ++ LYK + +NP+ Sbjct: 577 IVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKR-EPKRAQMEIMALYKMNKVNPIT 635 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+QIP A++ ++ S +R A F GWI +L A D LF Sbjct: 636 GCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWETPIWFIG 690 Query: 488 MHVGIWPIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + PI++ + MF Q K+S + Q + M ++F F +FP+GL I Sbjct: 691 KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNI 750 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW S ++ ++QQ V K+ + Sbjct: 751 YWFSSMLLGVIQQWVTNKILDEK 773 >gi|255311052|ref|ZP_05353622.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis 6276] Length = 787 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 115/443 (25%), Positives = 194/443 (43%), Gaps = 50/443 (11%) Query: 157 KLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNT 213 L+ ++ + +T SL E Y F++ T D I P+ +N Sbjct: 347 TLILESGDG-GIRKTYSLGEQPYAFELEIQTTQGREDLW-------ITSGVPEVEIMSNA 398 Query: 214 FGVQEGFIAVLGDKS-LVEQKYSDIEKSSISNFHESNSWLGISDKYW------------- 259 F + AV +KS L K + S + + + W+ S+ Y+ Sbjct: 399 FVPAVKYHAVKKNKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAG 458 Query: 260 -ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 AS FIP D + LP ++ ++AG PT+ Sbjct: 459 YASSFIPGNVVPTRLSQLPPKDQTYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTL 518 Query: 319 HHYEKDLAI-----PRFEMLIDW-GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTT 368 ++ A P + I + G+F FI +P +F++M +F L G++GI+I+L T Sbjct: 519 KALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLT 578 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KLL +PL S M+ + P I E+++K+K+ P+ Q ++ LYK + +NP+ Sbjct: 579 IVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKR-EPKRAQMEIMALYKMNKVNPIT 637 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+QIP A++ ++ S +R A F GWI +L A D LF Sbjct: 638 GCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWETPIWFIG 692 Query: 488 MHVGIWPIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + PI++ + MF Q K+S + Q + M ++F F +FP+GL I Sbjct: 693 KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNI 752 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW S ++ ++QQ V K+ + Sbjct: 753 YWFSSMLLGVIQQWVTNKILDEK 775 >gi|300869651|ref|YP_003784522.1| 60 kDa inner membrane insertion protein [Brachyspira pilosicoli 95/1000] gi|300687350|gb|ADK30021.1| 60 kDa inner membrane insertion protein [Brachyspira pilosicoli 95/1000] Length = 602 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 106/524 (20%), Positives = 217/524 (41%), Gaps = 47/524 (8%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN 131 L+N +I + K L+ Y+ S + + + + Y L + + +N Sbjct: 61 TLENDYVIATF--KNGSLFSYKLKNYYKQDSEITNEIVDMVEQVYEGIYPFTLTFQNLSN 118 Query: 132 NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNS 190 +I LPN +++ +T + N I ++T + E Y T+ N S Sbjct: 119 SIALPNVFNYYSVKENNAVTYVADASI---EGNPIRIKKTFAFGEDPYQLTNTVTIENLS 175 Query: 191 IDQIRFSPRGRI------------MRHKPQTATNTFGVQEGFIAVLGDKSLVEQK----- 233 + + + T G VL +V++ Sbjct: 176 EKDLSMYYSYFLGTGIGPYRTEKNSVREDATKAQYLIKGNGKSKVLLTGDIVKENILSKL 235 Query: 234 --YSDIEKSSISNF---HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + K++ + + W+ ++++Y+A + P++ + + Y+ Sbjct: 236 FGFGNGAKTNNVRYSIYEGQDKWVALNNRYFAIISSPAQSNAKFETMTFSRPVTNEYRND 295 Query: 289 F----SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW-FYFIA 343 F +E I G S+ T ++ G K Y + + G + Sbjct: 296 FHIANLISEHNIKSGSSVVDTYSVYIGPKVRRIFSKYYLEESYESIFQESFLGLNLRPLT 355 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++++ Y ++ AI+L T+ K++ +PL Y S M+ + PKI+ +RE++ Sbjct: 356 YILDIILNALYGFTKSYAWAIILFTLIFKIVTYPLNHASYKSMRKMQLVNPKIERIREQY 415 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K +P + L ++ +YK INPL GC P+LL P+ A + ++ +E+R+ P + WI Sbjct: 416 KDNP-EKLNAEIMNIYKKEKINPLGGCLPMLLPFPLLIAFFYLMQSMVELRNTP-FLWIT 473 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--------PPADKG 515 DL++ D +F +P G + ++PI+M+++ ++ MK+ P A Sbjct: 474 DLSSPDKLFVFP--AAIPIL--GGFNFNLFPILMAITSYVSMKIQPSSSAGAAGGQAAMQ 529 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 M+ P++ + +F +GL +YW+ NV ++QQ + K+ Sbjct: 530 MKMMTTIFPLMMLLMFYNFASGLALYWTAQNVFGVIQQFITSKL 573 >gi|237804596|ref|YP_002888750.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis B/TZ1A828/OT] gi|231272896|emb|CAX09807.1| inner membrane protein [Chlamydia trachomatis B/TZ1A828/OT] Length = 787 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 117/443 (26%), Positives = 194/443 (43%), Gaps = 50/443 (11%) Query: 157 KLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNT 213 L+ ++ + RT SL E Y F++ T D I P+ +N Sbjct: 347 TLILESGDG-GIRRTYSLGEQPYAFELEIQTTQGREDLW-------ITSGVPEVEIMSNA 398 Query: 214 FGVQEGFIAVLGDKS-LVEQKYSDIEKSSISNFHESNSWLGISDKYW------------- 259 F + AV +KS L K + S + + + W+ S+ Y+ Sbjct: 399 FVPAVKYHAVKKNKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAG 458 Query: 260 -ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 AS FIP D + LP ++ ++AG PT+ Sbjct: 459 YASSFIPGNVVPTRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTL 518 Query: 319 HHYEKDLAI-----PRFEMLIDW-GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTT 368 ++ A P + I + G+F FI +P +F++M +F L G++GI+I+L T Sbjct: 519 KALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLT 578 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KLL +PL S M+ + P I E+++K+K+ P+ Q ++ LYK + +NP+ Sbjct: 579 IVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKR-EPKRAQMEIMALYKMNKVNPIT 637 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+QIP A++ ++ S +R A F GWI +L A D LF Sbjct: 638 GCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWETPIWFIG 692 Query: 488 MHVGIWPIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + PI++ + MF Q K+S + Q + M ++F F +FP+GL I Sbjct: 693 KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNI 752 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW S ++ +VQQ V K+ + Sbjct: 753 YWFSSMLLGVVQQWVTNKILDEK 775 >gi|46446715|ref|YP_008080.1| putative inner membrane protein translocase component YidC [Candidatus Protochlamydia amoebophila UWE25] gi|46400356|emb|CAF23805.1| putative 60 kDa inner-membrane protein [Candidatus Protochlamydia amoebophila UWE25] Length = 866 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 87/316 (27%), Positives = 149/316 (47%), Gaps = 29/316 (9%) Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT--TTNFLFAGAKEFPTIHHYEKD 324 T+ S+ + + YQA + LP KS FAG + T+ + Sbjct: 537 SGTNVPSRLIEIDQEYNLYQAANLPGYMAYLPLKSQGGLMNFRFFAGPFDDETLKTIDAK 596 Query: 325 LAIPRFEMLIDW-------GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + D+ GWF FI++P + +LM +F+ L ++ ++I+L TV ++L Sbjct: 597 YSNSETGYNPDYIACQTMHGWFTFISEPFAKFLLILMKFFHYLTNSWALSIVLLTVSLRL 656 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 + +PL S M+ I P++ ++EK+K+ P + Q ++ LY+ +NP +GC P+ Sbjct: 657 MLYPLNTWSTKSMVRMQQIAPQVTAIQEKYKKDP-KKAQLEIMSLYRERGVNPASGCLPL 715 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 L+Q+P ++ ++ S +R APF GWI DL A D ++ P + G + Sbjct: 716 LIQMPFLIGMFDLLKSSFALRGAPFISGWIDDLTAPDVLFSWS----KPIFFIG-TEFHL 770 Query: 493 WPIIMSLSMFIQMKMS---------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 PI++ L MF+Q + + Q + M VVF +FP+GL IYW Sbjct: 771 LPILLGLVMFLQQRFMSSGPKDLSQMTDQQRQQRAMGTMMTVVFAVMFYNFPSGLNIYWL 830 Query: 544 WSNVISIVQQAVIMKM 559 S ++ +VQQ + K Sbjct: 831 SSMLLGMVQQWFVSKQ 846 >gi|89898342|ref|YP_515452.1| putative inner membrane protein translocase component YidC [Chlamydophila felis Fe/C-56] gi|89331714|dbj|BAE81307.1| inner membrane protein [Chlamydophila felis Fe/C-56] Length = 794 Score = 217 bits (553), Expect = 4e-54, Method: Composition-based stats. Identities = 97/345 (28%), Positives = 167/345 (48%), Gaps = 38/345 (11%) Query: 251 WLGISDKYWASVF-----IPS-------KETSFHSQFKYLSDGHARYQAKFSANEITILP 298 W+ S+ Y+ + IP+ +S ++ LS + Y A T+LP Sbjct: 442 WILNSNGYFGIILSPLTDIPAGYAASYVPGSSVPTRLSLLSPKNQAYPASKYPGYETLLP 501 Query: 299 --GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW------GWFYFIAKP----M 346 + T ++AG PT+ ++ + E G F FI +P + Sbjct: 502 LPKQEGTYRFLVYAGPLAEPTLRALDQAYTNSKGESPQYLDCITFRGIFAFITEPFAALL 561 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F++M +F + G++GI+I+L TVF+KLL +PL S M+ + P I E+++K+K Sbjct: 562 FIIMKFFRMITGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYK-K 620 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 P+ Q ++ LYKT+ +NP+ GC P+L+Q+P A++ ++ S +R A F GWI +L Sbjct: 621 EPKRAQMEVMALYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNL 680 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-------PPADKGQAM 518 A D +T P + G + PI++ + MF Q K+S + Q Sbjct: 681 TAPDVLFSWT----TPVWFIG-NEFHLLPILLGIVMFAQQKLSALKRKAPVTDQQRQQEA 735 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + M ++F F +FP+GL IYW S ++ ++QQ K+ ++ Sbjct: 736 MGTMMALLFTFMFYNFPSGLNIYWFSSMLLGLIQQWATNKILDSK 780 >gi|313157184|gb|EFR56614.1| membrane protein insertase, YidC/Oxa1 family [Alistipes sp. HGB5] Length = 656 Score = 217 bits (553), Expect = 4e-54, Method: Composition-based stats. Identities = 121/684 (17%), Positives = 238/684 (34%), Gaps = 155/684 (22%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ + I + ++ + + E+ E Q + + A D Sbjct: 1 MD--KKTILGIVVVAVLFLGFAY-VNTKQQEKYQQEMAAWQAYQDSVAAASRPAVPAADS 57 Query: 61 -----------------------------------------RAQALSMSPRVELKNPSLI 79 A + ++N + Sbjct: 58 VAGGAAESAVAASGETTAPEAEADLAQTVRQRRIAAMGEYLTAAQEAEPEEFTVENEVMT 117 Query: 80 GSINLKGAQFDDLNLRGY--HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPN 137 + +G Q + L+ Y + ++ L+ P++ + Sbjct: 118 VRFSTRGGQITGVTLKDYTKYAPRGQRDQLIELMDPASAR-------------------- 157 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI--------------- 182 + F N + + ++D Y+F+ Sbjct: 158 ------------------FDMSFYVKNGLNNVKVNTMD--YVFRAEPVETAGDARRVTMR 197 Query: 183 -----------VDTVTNNSI--DQIRFSPRGRIMRHKPQTATNTFG-------------- 215 + N R++ PQ A T Sbjct: 198 LAVAENAWLEYEYLIYNKQAPERDYLVDFNVRLVNMAPQMANQTSIGIDWSNVSYQNEKG 257 Query: 216 -----VQEGFIAVLGDK-SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 + + S+ E SD KS + + +W+ ++++SVFI + Sbjct: 258 FQNENMYTTLAYRFPGESSIEELGMSDGAKSK--SVSTAVNWVAFKQQFFSSVFIAPQNV 315 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP- 328 S + + + FS + + G ++ + + Sbjct: 316 SSANMAFDTAAPGSELLKSFSVQMAVPYSAQVEGYDFAFYFGPNKYAILKKVTDNNGADL 375 Query: 329 RFEMLIDWGWFYFIAKPMF---MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 E LI GW F + + + N +G+FGI I++ + VKL+ PL K YVS Sbjct: 376 HMERLIPLGWGIFGWVNRWCVIPVFDFLRNYIGSFGIIILILVILVKLVISPLTYKSYVS 435 Query: 386 TANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 A M+ I+P++DEL +K+ K+ Q+A ++LYK INP+ GC P+L+Q+P+ A++ Sbjct: 436 MAKMRLIKPQVDELNKKYPKKEDAMKKQQATMELYKKAGINPMGGCIPMLIQLPILIAMF 495 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF-- 502 + S+E+R P + W DL++ D +I L +PFY HV ++ ++M++S+F Sbjct: 496 RFFPASIELREQP-FLWADDLSSYD--SIVNLPFSIPFYGD---HVSLFALLMAVSLFGY 549 Query: 503 ----IQMKMSPPPADKGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q S P G ++ MP++ + +S+ +GL Y+ SN+ +I Q VI Sbjct: 550 SYFNYQQTASSQPQMAGMKFMMVYMMPIMMLLWFNSYSSGLCYYYLLSNLFTIGQTLVIR 609 Query: 558 KMHGAEIGLIDRLRSTFSKNYNSQ 581 ++ E + +++ ++ + Sbjct: 610 RIVDDE-KIHAVMQANAARKSKGK 632 >gi|301335721|ref|ZP_07223965.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis L2tet1] Length = 785 Score = 217 bits (552), Expect = 5e-54, Method: Composition-based stats. Identities = 115/443 (25%), Positives = 194/443 (43%), Gaps = 50/443 (11%) Query: 157 KLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNT 213 L+ ++ + +T SL E Y F++ T D I P+ +N Sbjct: 345 TLILESGDG-GIRKTYSLGEQPYAFELEIQTTQGREDLW-------ITSGVPEVEIMSNA 396 Query: 214 FGVQEGFIAVLGDKS-LVEQKYSDIEKSSISNFHESNSWLGISDKYW------------- 259 F + AV +KS L K + S + + + W+ S+ Y+ Sbjct: 397 FVPAVKYHAVKKNKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAG 456 Query: 260 -ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 AS FIP D + LP ++ ++AG PT+ Sbjct: 457 YASSFIPGNVVPTRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTL 516 Query: 319 HHYEKDLAI-----PRFEMLIDW-GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTT 368 ++ A P + I + G+F FI +P +F++M +F L G++GI+I+L T Sbjct: 517 KTLDRANANSKGETPEYIDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLT 576 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KLL +PL S M+ + P I E+++K+K+ P+ Q ++ LYK + +NP+ Sbjct: 577 IVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKR-EPKRAQMEIMALYKMNKVNPIT 635 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+QIP A++ ++ S +R A F GWI +L A D LF Sbjct: 636 GCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWETPIWFIG 690 Query: 488 MHVGIWPIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + PI++ + MF Q K+S + Q + M ++F F +FP+GL I Sbjct: 691 KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNI 750 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW S ++ ++QQ V K+ + Sbjct: 751 YWFSSMLLGVIQQWVTNKILDEQ 773 >gi|166154462|ref|YP_001654580.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis 434/Bu] gi|166155337|ref|YP_001653592.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|165930450|emb|CAP03943.1| inner membrane protein [Chlamydia trachomatis 434/Bu] gi|165931325|emb|CAP06897.1| inner membrane protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 787 Score = 217 bits (552), Expect = 5e-54, Method: Composition-based stats. Identities = 115/443 (25%), Positives = 194/443 (43%), Gaps = 50/443 (11%) Query: 157 KLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNT 213 L+ ++ + +T SL E Y F++ T D I P+ +N Sbjct: 347 TLILESGDG-GIRKTYSLGEQPYAFELEIQTTQGREDLW-------ITSGVPEVEIMSNA 398 Query: 214 FGVQEGFIAVLGDKS-LVEQKYSDIEKSSISNFHESNSWLGISDKYW------------- 259 F + AV +KS L K + S + + + W+ S+ Y+ Sbjct: 399 FVPAVKYHAVKKNKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAG 458 Query: 260 -ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 AS FIP D + LP ++ ++AG PT+ Sbjct: 459 YASSFIPGNVVPTRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTL 518 Query: 319 HHYEKDLAI-----PRFEMLIDW-GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTT 368 ++ A P + I + G+F FI +P +F++M +F L G++GI+I+L T Sbjct: 519 KTLDRANANSKGETPEYIDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLT 578 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KLL +PL S M+ + P I E+++K+K+ P+ Q ++ LYK + +NP+ Sbjct: 579 IVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKR-EPKRAQMEIMALYKMNKVNPIT 637 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+QIP A++ ++ S +R A F GWI +L A D LF Sbjct: 638 GCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWETPIWFIG 692 Query: 488 MHVGIWPIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + PI++ + MF Q K+S + Q + M ++F F +FP+GL I Sbjct: 693 KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNI 752 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW S ++ ++QQ V K+ + Sbjct: 753 YWFSSMLLGVIQQWVTNKILDEQ 775 >gi|15835845|ref|NP_300369.1| putative inner membrane protein translocase component YidC [Chlamydophila pneumoniae J138] gi|16752729|ref|NP_444996.1| putative inner membrane protein translocase component YidC [Chlamydophila pneumoniae AR39] gi|38502924|sp|Q7VQ46|OXAA_CHLPN RecName: Full=Inner membrane protein oxaA gi|7189370|gb|AAF38286.1| inner membrane protein, putative [Chlamydophila pneumoniae AR39] gi|8978684|dbj|BAA98520.1| 60 kDa inner membrane protein [Chlamydophila pneumoniae J138] Length = 795 Score = 216 bits (551), Expect = 6e-54, Method: Composition-based stats. Identities = 119/501 (23%), Positives = 215/501 (42%), Gaps = 65/501 (12%) Query: 114 SNTKNAYFAELD-YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI------ 166 N+ Y+ L + + + LP N++SG+ L TP+ L ++ + Sbjct: 295 KNSIGGYYPLLRRGLLSDSKKLLPLEYHALNVVSGREL--ATPVALRYRVLSYTPHSIQL 352 Query: 167 -----LFERTISLDEH-----YLFKIVDTVTNNSIDQI--RFSPRGRIMRHKPQTATNTF 214 ++ L E+ Y+F+ T+T + D P IM + Sbjct: 353 ESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEIMSNASAPTIK-- 410 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE------ 268 + SL + K +++ W+ S+ Y+ + P E Sbjct: 411 ----YRVIKKNKGSLDKVKLPKVKEPLAVRRGVYPQWILNSNGYFGIILTPLSEIASGYG 466 Query: 269 ------TSFHSQFKYLSDGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHH 320 ++ ++ +S + Y T+LP + T ++AG PT+ Sbjct: 467 SLYISGSTAPTRLSAISPKNQLYPVSKYPGYETLLPLPKDAGTHRFLVYAGPLAEPTLKV 526 Query: 321 YEKDLAIPRFEMLIDW------GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTTVF 370 +K + + E G F FI P +F++M +F + G++GI+I+L TVF Sbjct: 527 LDKTITQEKGENPEYLDSISFRGVFAFITAPFAALLFIIMKFFKLVTGSWGISIILLTVF 586 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 +KLL +PL S M+ + P I ++++K+K P+ Q ++ LYKT+ +NP+ GC Sbjct: 587 LKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKN-EPKRAQMEIMGLYKTNKVNPITGC 645 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 P+L+Q+P A++ ++ S +R A F GWI +L A D LF Sbjct: 646 LPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWQTSIWFIGNE 700 Query: 490 VGIWPIIMSLSMFIQMKMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 + PI++ + MF+Q K++ K Q ++ N M ++F +FP+GL IYW Sbjct: 701 FHLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLNIYW 760 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 S ++ +VQQ + K+ ++ Sbjct: 761 LSSMILGVVQQWITNKILDSK 781 >gi|33241654|ref|NP_876595.1| putative inner membrane protein translocase component YidC [Chlamydophila pneumoniae TW-183] gi|33236163|gb|AAP98252.1| 60kDa inner membrane protein [Chlamydophila pneumoniae TW-183] Length = 790 Score = 216 bits (551), Expect = 7e-54, Method: Composition-based stats. Identities = 119/501 (23%), Positives = 215/501 (42%), Gaps = 65/501 (12%) Query: 114 SNTKNAYFAELD-YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI------ 166 N+ Y+ L + + + LP N++SG+ L TP+ L ++ + Sbjct: 290 KNSIGGYYPLLRRGLLSDSKKLLPLEYHALNVVSGREL--ATPVALRYRVLSYTPHSIQL 347 Query: 167 -----LFERTISLDEH-----YLFKIVDTVTNNSIDQI--RFSPRGRIMRHKPQTATNTF 214 ++ L E+ Y+F+ T+T + D P IM + Sbjct: 348 ESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEIMSNASAPTIK-- 405 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE------ 268 + SL + K +++ W+ S+ Y+ + P E Sbjct: 406 ----YRVIKKNKGSLDKVKLPKVKEPLAVRRGVYPQWILNSNGYFGIILTPLSEIASGYG 461 Query: 269 ------TSFHSQFKYLSDGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHH 320 ++ ++ +S + Y T+LP + T ++AG PT+ Sbjct: 462 SLYISGSTAPTRLSAISPKNQLYPVSKYPGYETLLPLPKDAGTHRFLVYAGPLAEPTLKV 521 Query: 321 YEKDLAIPRFEMLIDW------GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTTVF 370 +K + + E G F FI P +F++M +F + G++GI+I+L TVF Sbjct: 522 LDKTITQEKGENPEYLDSISFRGVFAFITAPFAALLFIIMKFFKLVTGSWGISIILLTVF 581 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 +KLL +PL S M+ + P I ++++K+K P+ Q ++ LYKT+ +NP+ GC Sbjct: 582 LKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKN-EPKRAQMEIMGLYKTNKVNPITGC 640 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 P+L+Q+P A++ ++ S +R A F GWI +L A D LF Sbjct: 641 LPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWQTSIWFIGNE 695 Query: 490 VGIWPIIMSLSMFIQMKMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 + PI++ + MF+Q K++ K Q ++ N M ++F +FP+GL IYW Sbjct: 696 FHLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLNIYW 755 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 S ++ +VQQ + K+ ++ Sbjct: 756 LSSMILGVVQQWITNKILDSK 776 >gi|15618230|ref|NP_224515.1| putative inner membrane protein translocase component YidC [Chlamydophila pneumoniae CWL029] gi|4376587|gb|AAD18459.1| 60 kDa Inner Membrane Protein [Chlamydophila pneumoniae CWL029] Length = 795 Score = 216 bits (550), Expect = 8e-54, Method: Composition-based stats. Identities = 119/501 (23%), Positives = 215/501 (42%), Gaps = 65/501 (12%) Query: 114 SNTKNAYFAELD-YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI------ 166 N+ Y+ L + + + LP N++SG+ L TP+ L ++ + Sbjct: 295 KNSIGGYYPLLRRGLLSDSKKLLPLEYHALNVVSGREL--ATPVALRYRVLSYTPHSIQL 352 Query: 167 -----LFERTISLDEH-----YLFKIVDTVTNNSIDQI--RFSPRGRIMRHKPQTATNTF 214 ++ L E+ Y+F+ T+T + D P IM + Sbjct: 353 ESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEIMSNASAPTIK-- 410 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE------ 268 + SL + K +++ W+ S+ Y+ + P E Sbjct: 411 ----YRVIKKNKGSLDKVKLPKVKEPLAIRRGVYPQWILNSNGYFGIILTPLSEIASGYG 466 Query: 269 ------TSFHSQFKYLSDGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHH 320 ++ ++ +S + Y T+LP + T ++AG PT+ Sbjct: 467 SLYISGSTAPTRLSAISPKNQLYPVSKYPGYETLLPLPKDAGTHRFLVYAGPLAEPTLKV 526 Query: 321 YEKDLAIPRFEMLIDW------GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTTVF 370 +K + + E G F FI P +F++M +F + G++GI+I+L TVF Sbjct: 527 LDKTITQEKGENPEYLDSISFRGVFAFITAPFAALLFIIMKFFKLVTGSWGISIILLTVF 586 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 +KLL +PL S M+ + P I ++++K+K P+ Q ++ LYKT+ +NP+ GC Sbjct: 587 LKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKN-EPKRAQMEIMGLYKTNKVNPITGC 645 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 P+L+Q+P A++ ++ S +R A F GWI +L A D LF Sbjct: 646 LPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWQTSIWFIGNE 700 Query: 490 VGIWPIIMSLSMFIQMKMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 + PI++ + MF+Q K++ K Q ++ N M ++F +FP+GL IYW Sbjct: 701 FHLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLNIYW 760 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 S ++ +VQQ + K+ ++ Sbjct: 761 LSSMILGVVQQWITNKILDSK 781 >gi|269303185|gb|ACZ33285.1| inner membrane protein [Chlamydophila pneumoniae LPCoLN] Length = 795 Score = 216 bits (549), Expect = 1e-53, Method: Composition-based stats. Identities = 120/501 (23%), Positives = 216/501 (43%), Gaps = 65/501 (12%) Query: 114 SNTKNAYFAELD-YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI------ 166 N+ Y+ L + + + LP N++SG+ L TP+ L ++ + Sbjct: 295 KNSIGGYYPLLRRGLLSDSKKLLPLEYHALNVVSGREL--ATPVALRYRVLSYTPHSIQL 352 Query: 167 -----LFERTISLDEH-----YLFKIVDTVTNNSIDQI--RFSPRGRIMRHKPQTATNTF 214 ++ L E+ Y+F+ T+T + D P IM + Sbjct: 353 ESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEIMSNASVPTIK-- 410 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE------ 268 + SL + K +++ W+ S+ Y+ + P E Sbjct: 411 ----YRVIKKNKGSLDKVKLPKVKEPLAVRRGVYPQWILNSNGYFGIILTPLSEIASGYG 466 Query: 269 ------TSFHSQFKYLSDGHARYQAKFSANEITILP--GKSITTTNFLFAGAKEFPTIHH 320 ++ ++ +S + Y A T+LP + T ++AG PT+ Sbjct: 467 SLYISGSTAPTRLSAISPKNQLYPASKYPGYETLLPLPKDAGTHRFLVYAGPLAEPTLKV 526 Query: 321 YEKDLAIPRFEMLIDW------GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTTVF 370 +K + + E G F FI P +F++M +F + G++GI+I+L TVF Sbjct: 527 LDKTITQEKGENPEYLDSISFRGVFAFITAPFAALLFIIMKFFKLVTGSWGISIILLTVF 586 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 +KLL +PL S M+ + P I ++++K+K P+ Q ++ LYKT+ +NP+ GC Sbjct: 587 LKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKN-EPKRAQMEIMGLYKTNKVNPITGC 645 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 P+L+Q+P A++ ++ S +R A F GWI +L A D LF Sbjct: 646 LPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWQTSIWFIGNE 700 Query: 490 VGIWPIIMSLSMFIQMKMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 + PI++ + MF+Q K++ K Q ++ N M ++F +FP+GL IYW Sbjct: 701 FHLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLNIYW 760 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 S ++ +VQQ + K+ ++ Sbjct: 761 LSSMILGVVQQWITNKILDSK 781 >gi|283782053|ref|YP_003372808.1| 60 kDa inner membrane insertion protein [Pirellula staleyi DSM 6068] gi|283440506|gb|ADB18948.1| 60 kDa inner membrane insertion protein [Pirellula staleyi DSM 6068] Length = 841 Score = 216 bits (549), Expect = 1e-53, Method: Composition-based stats. Identities = 83/359 (23%), Positives = 161/359 (44%), Gaps = 50/359 (13%) Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA------------------ 283 + N + ++G+ +++AS+ +P + + + Sbjct: 453 LENKPSAIDYIGVDTQFFASMILPGNSYKTKGGNEPAKNESSVTPAIIFRRASAMPVQAW 512 Query: 284 -----------RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 ++ + TI PG+++ +F G KE + Y Sbjct: 513 EPIPKTRIKTMNVSSRLVSQVETIAPGETLVHNYRVFFGPKEPDVLKDY-------GMTS 565 Query: 333 LIDWGWFY--FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 LI++GW Y A + ++ Y+++ N+GIAI+L TV V+ P++ KQ S A M+ Sbjct: 566 LIEYGWSYAAIPAFILRSVLETIYSIIPNYGIAIILLTVIVRSAMIPVSLKQAKSAAMMQ 625 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P++ +++EK+ + + +A+ +LY HN NP GC P+ +Q+PVF +Y+ +S+ Sbjct: 626 QLAPEMAKIKEKYADN-MEKQSQAIRELYAKHNFNPFGGCLPVFIQLPVFIGLYRCLSVD 684 Query: 451 LEMRHA---PFWGWIKDLAAADPTNIFT--LFGILPFYLPGFM--HVGIWPIIMSLSMFI 503 +E+R A P W +LA D + +F ++ G++ ++P+I + Sbjct: 685 IELRDAALFPGIAWASNLAGPDKLFYWKDYVFSMMGDEANGWLGPFFNVFPLITVSLFLV 744 Query: 504 QMKMSPPP----ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q KM PP Q ++ +M V PAGL +Y+ S++ I ++ ++ K Sbjct: 745 QQKMFTPPATDEQTAMQQKMMTYMTVFMGVMFYKVPAGLCVYFITSSLWGIAERKLLPK 803 >gi|255348610|ref|ZP_05380617.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis 70] gi|255506828|ref|ZP_05382467.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis D(s)2923] gi|296434839|gb|ADH17017.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis E/150] Length = 785 Score = 216 bits (549), Expect = 1e-53, Method: Composition-based stats. Identities = 113/443 (25%), Positives = 194/443 (43%), Gaps = 50/443 (11%) Query: 157 KLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNT 213 L+ ++ + +T SL E Y F++ T D I P+ +N Sbjct: 345 TLILESGDG-GIRKTYSLGEQPYAFELEIQTTQGREDLW-------ITSGVPEVEIMSNA 396 Query: 214 FGVQEGFIAVLGDKS-LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK----- 267 F + AV +KS L K + S + + + W+ S+ Y+ + P Sbjct: 397 FVPAVKYHAVKKNKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAG 456 Query: 268 -------ETSFHSQFKYLSDGHARYQAKFSAN--EITILPGKSITTTNFLFAGAKEFPTI 318 ++ L Y A + LP ++ ++AG PT+ Sbjct: 457 YASSFILGNVVPTRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTL 516 Query: 319 HHYEKDLAI-----PRFEMLIDW-GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTT 368 ++ A P + I + G+F FI +P +F++M +F L G++GI+I+L T Sbjct: 517 KALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLT 576 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KLL +PL S M+ + P I E+++K K+ P+ Q ++ LYK + +NP+ Sbjct: 577 IVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKHKR-EPKRAQMEIMALYKMNKVNPIT 635 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+QIP A++ ++ S +R A F GWI +L A D LF Sbjct: 636 GCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWETPIWFIG 690 Query: 488 MHVGIWPIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + PI++ + MF Q K+S + Q + M ++F F +FP+GL I Sbjct: 691 KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNI 750 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW S ++ ++QQ V K+ + Sbjct: 751 YWFSSMLLGVIQQWVTNKILDEK 773 >gi|255503150|ref|ZP_05381540.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis 70s] gi|289525290|emb|CBJ14766.1| inner membrane protein [Chlamydia trachomatis Sweden2] gi|296438559|gb|ADH20712.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis E/11023] Length = 787 Score = 216 bits (549), Expect = 1e-53, Method: Composition-based stats. Identities = 113/443 (25%), Positives = 194/443 (43%), Gaps = 50/443 (11%) Query: 157 KLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNT 213 L+ ++ + +T SL E Y F++ T D I P+ +N Sbjct: 347 TLILESGDG-GIRKTYSLGEQPYAFELEIQTTQGREDLW-------ITSGVPEVEIMSNA 398 Query: 214 FGVQEGFIAVLGDKS-LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK----- 267 F + AV +KS L K + S + + + W+ S+ Y+ + P Sbjct: 399 FVPAVKYHAVKKNKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAG 458 Query: 268 -------ETSFHSQFKYLSDGHARYQAKFSAN--EITILPGKSITTTNFLFAGAKEFPTI 318 ++ L Y A + LP ++ ++AG PT+ Sbjct: 459 YASSFILGNVVPTRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTL 518 Query: 319 HHYEKDLAI-----PRFEMLIDW-GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTT 368 ++ A P + I + G+F FI +P +F++M +F L G++GI+I+L T Sbjct: 519 KALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLT 578 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KLL +PL S M+ + P I E+++K K+ P+ Q ++ LYK + +NP+ Sbjct: 579 IVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKHKR-EPKRAQMEIMALYKMNKVNPIT 637 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+QIP A++ ++ S +R A F GWI +L A D LF Sbjct: 638 GCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPD-----VLFSWETPIWFIG 692 Query: 488 MHVGIWPIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + PI++ + MF Q K+S + Q + M ++F F +FP+GL I Sbjct: 693 KEFHLLPILLGVVMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNI 752 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW S ++ ++QQ V K+ + Sbjct: 753 YWFSSMLLGVIQQWVTNKILDEK 775 >gi|163931198|pdb|3BLC|A Chain A, Crystal Structure Of The Periplasmic Domain Of The Escherichia Coli Yidc gi|163931199|pdb|3BLC|B Chain B, Crystal Structure Of The Periplasmic Domain Of The Escherichia Coli Yidc Length = 330 Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 106/308 (34%), Gaps = 28/308 (9%) Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 D A + +K L +IN +G + L Y +++S P L + Sbjct: 21 GSAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ET 78 Query: 115 NTKNAYFAELDYVSTANNIELPNS--------NTVWNLISGKILTPTTPIKLVFKNANNI 166 + + Y A+ N + L G+ + + +A Sbjct: 79 SPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQ---NELQVPXTYTDAAGN 135 Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE-- 218 F +T L Y + V N + S G++ + T ++ F + Sbjct: 136 TFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFR 195 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G D + + I + N W+ +Y+A+ +IP + + + F Sbjct: 196 GAAYSTPDAAYAAYAFDTIADNENLNISSKGGWVAXLQQYFATAWIPHNDGTNN--FYTA 253 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + G+ + + + + PG++ + L+ G + P ++ +D+GW Sbjct: 254 NLGNGIAAIGYKSQPVLVQPGQTGAXNSTLWVGPEIQDKXAAV-----APHLDLTVDYGW 308 Query: 339 FYFIAKPM 346 +FI++P+ Sbjct: 309 LWFISQPL 316 >gi|329938642|ref|ZP_08288038.1| Inner membrane protein translocase component YidC, long form [Streptomyces griseoaurantiacus M045] gi|329302133|gb|EGG46025.1| Inner membrane protein translocase component YidC, long form [Streptomyces griseoaurantiacus M045] Length = 443 Score = 214 bits (544), Expect = 5e-53, Method: Composition-based stats. Identities = 69/283 (24%), Positives = 130/283 (45%), Gaps = 42/283 (14%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 G+F FI P+ ++ F+ + G +G++I+ + +++ PL KQ +T Sbjct: 6 GFFSFITTPVSWVIVQFHTVYGAIFGADTGWAWGLSIVSLVILIRICLIPLFVKQIKATR 65 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+ Sbjct: 66 AMQTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVL 124 Query: 448 SISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPF-------------YLPGFMHVGI 492 + + G I D LA+A +IF F + + Sbjct: 125 N---GIATGKTIGVINDDLLASARKAHIFGAPLAAKFMDSSDKVEALGATLTDVRVVTAV 181 Query: 493 WPIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 ++MS S F + P + Q M++ PV+F +FP G+++YW Sbjct: 182 MIVLMSFSQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWL 241 Query: 544 WSNVISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYNSQ 581 +NV ++ QQ +++ + A+ ++RL + + ++ Sbjct: 242 TTNVWTMGQQMYVIRNNPTPGSKAQAAYLERLHKHVTNHGKTR 284 >gi|318058974|ref|ZP_07977697.1| putative inner membrane protein translocase component YidC [Streptomyces sp. SA3_actG] gi|318077328|ref|ZP_07984660.1| putative inner membrane protein translocase component YidC [Streptomyces sp. SA3_actF] Length = 447 Score = 212 bits (541), Expect = 9e-53, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 116/253 (45%), Gaps = 34/253 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 WF FI P+ ++ F+ L G +G++I+ + +++ PL KQ +T Sbjct: 7 WFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKATRA 66 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP++ ++E++K Q + M++LYK NPL+ C PIL+Q P FFA+Y V+ Sbjct: 67 MQTLQPEMKRIQERYKSDK-QRQSEEMMKLYKESGTNPLSSCLPILVQSPFFFALYHVL- 124 Query: 449 ISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPF----------YLPGFMHVGIWPII 496 + G I D L +A +IF F + ++ Sbjct: 125 --DGIASNKKIGVINDKLLDSAQQAHIFGAPLAAKFTSGADSLGADLTTVRIVTACMIVM 182 Query: 497 MSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 MS S F + P + Q M++ PV+F +FP G+++YW +NV Sbjct: 183 MSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLLYWLTTNV 242 Query: 548 ISIVQQAVIMKMH 560 ++ QQ +++ + Sbjct: 243 WTMGQQMFVIRQN 255 >gi|302520509|ref|ZP_07272851.1| membrane protein oxaA [Streptomyces sp. SPB78] gi|302429404|gb|EFL01220.1| membrane protein oxaA [Streptomyces sp. SPB78] Length = 447 Score = 212 bits (540), Expect = 1e-52, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 116/253 (45%), Gaps = 34/253 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 WF FI P+ ++ F+ L G +G++I+ + +++ PL KQ +T Sbjct: 7 WFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKATRA 66 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP++ ++E++K Q + M++LYK NPL+ C PIL+Q P FFA+Y V+ Sbjct: 67 MQTLQPEMKRIQERYKSDK-QRQSEEMMKLYKESGTNPLSSCLPILVQSPFFFALYHVL- 124 Query: 449 ISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPF----------YLPGFMHVGIWPII 496 + G I D L +A +IF F + ++ Sbjct: 125 --DGIASNKKIGVINDKLLDSAQQAHIFGAPLAAKFTSGADSLGADLTTVRIVTACMIVM 182 Query: 497 MSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 MS S F + P + Q M++ PV+F +FP G+++YW +NV Sbjct: 183 MSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLLYWLTTNV 242 Query: 548 ISIVQQAVIMKMH 560 ++ QQ +++ + Sbjct: 243 WTMGQQMFVIRQN 255 >gi|295837761|ref|ZP_06824694.1| membrane protein OxaA [Streptomyces sp. SPB74] gi|197698917|gb|EDY45850.1| membrane protein OxaA [Streptomyces sp. SPB74] Length = 434 Score = 211 bits (537), Expect = 3e-52, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 116/253 (45%), Gaps = 34/253 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 WF FI P+ ++ F+ L G +G++I+ + +++ PL KQ +T Sbjct: 7 WFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKATRA 66 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP++ ++E++K Q + M++LYK NPLA C PIL+Q P FFA+Y V+ Sbjct: 67 MQTLQPEMKRIQERYKSDK-QRQSEEMMKLYKESGTNPLASCLPILVQSPFFFALYHVL- 124 Query: 449 ISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPF----------YLPGFMHVGIWPII 496 + G I D L +A +IF F + ++ Sbjct: 125 --DGIASNKKIGVINDKLLDSAQQAHIFGAPLAAKFTSGADSLGADLTTVRIVTACMIVM 182 Query: 497 MSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 MS S F + P + Q M++ P++F +FP G+++YW +NV Sbjct: 183 MSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLLYWLTTNV 242 Query: 548 ISIVQQAVIMKMH 560 ++ QQ +++ + Sbjct: 243 WTMGQQMYVIRQN 255 >gi|256548863|gb|ACU82913.1| 60 kD inner-membrane protein [Buchnera aphidicola (Acyrthosiphon pisum)] Length = 310 Score = 211 bits (536), Expect = 4e-52, Method: Composition-based stats. Identities = 60/319 (18%), Positives = 131/319 (41%), Gaps = 22/319 (6%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 + +KN + +N+ G ++ +L Y + S+ P L + + Y A+ + Sbjct: 1 IFIKNDVISLVVNMYGGDVEEASLLAYKDTLYSSRPFKLL--ETGSDFIYQAQSGLIGKD 58 Query: 131 NNIELPNSNTVWNLISGK--ILTP---TTPIKLVFKNANNILFERTISLDEH-YLFKIVD 184 N + + +L P + + + + N +++++T L + Y +I Sbjct: 59 GPDSSINDSRPLYSANKNFFVLGPNEKELRVPIKWLSKNGVIYKKTFILKPNRYDVQIEY 118 Query: 185 TVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDI 237 V N S + + + G+I + K + F +Q G D + K+ I Sbjct: 119 DVYNASKESLNMNIFGQIKQTINLPKKRNVYSGNFALQTFRGAAYSSDDNKYEKYKFDMI 178 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + +Y+A +IP L H + + I I Sbjct: 179 ANNKNLHIITESGWIAMLQQYFAVAWIPDNLGKNTIYTSSLD--HDTAVIGYKSPIINIP 236 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 P + L+ G + + L P ++ +D+GW +F+++P+F L++ Y+++ Sbjct: 237 PNSRSIIKSKLWIGPEIQKEMK-----LVAPNLDLTVDYGWLWFLSQPLFKLLTILYSII 291 Query: 358 GNFGIAIMLTTVFVKLLFF 376 GN+G +I+L T ++ L + Sbjct: 292 GNWGFSIILITFIMRGLTY 310 >gi|29830855|ref|NP_825489.1| putative inner membrane protein translocase component YidC [Streptomyces avermitilis MA-4680] gi|34098400|sp|P59811|OXAA_STRAW RecName: Full=Membrane protein oxaA gi|29607968|dbj|BAC72024.1| putative preprotein translocase YidC subunit [Streptomyces avermitilis MA-4680] Length = 428 Score = 209 bits (533), Expect = 7e-52, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 130/281 (46%), Gaps = 42/281 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+++ G +G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITIPVSWVIVQFHSVYGKVFGADTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKESGTNPLSSCLPILAQSPFFFALYHVLN- 125 Query: 450 SLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPF-------------YLPGFMHVGIWP 494 + G I D LA+A +IF F + + I Sbjct: 126 --GIATGKTIGVIDDQLLASARKAHIFGAPLAAKFTDSADKVTQLGATLMDVRVVTAIMI 183 Query: 495 IIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MS S F + P + Q M++ PV+F +FP G+++YW + Sbjct: 184 VLMSASQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAIFGINFPVGVLVYWLTT 243 Query: 546 NVISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYNSQ 581 NV ++ QQ +++ + A+ ++RL+ + ++ Sbjct: 244 NVWTMGQQMYVIRNNPTPGSKAQAAFLERLQKHVLHHGKTR 284 >gi|294630334|ref|ZP_06708894.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292833667|gb|EFF92016.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 432 Score = 209 bits (532), Expect = 1e-51, Method: Composition-based stats. Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 42/281 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G +G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITWPVSWVIVQFHKVYGAIFGADTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKEAGTNPLSSCLPILAQSPFFFALYHVLN- 125 Query: 450 SLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFY-------------LPGFMHVGIWP 494 + G+I D LA+A +IF F + + Sbjct: 126 --GIASGNKIGYINDAQLASARQAHIFGAPLAAKFLDGADTVAKLGASLTDVRVVTALMI 183 Query: 495 IIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MS S F + P + Q M++ P++F F FP G+++YW + Sbjct: 184 VLMSASQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPIMFAFFGIRFPVGVLVYWLTT 243 Query: 546 NVISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYNSQ 581 NV ++ QQ ++ + A+ ++RL + + ++ Sbjct: 244 NVWTMGQQMYVIHNNPTPGSKAQASYLERLLKHVTHHGKTR 284 >gi|91228356|ref|ZP_01262284.1| putative inner membrane protein translocase component YidC [Vibrio alginolyticus 12G01] gi|91188116|gb|EAS74420.1| putative inner membrane protein translocase component YidC [Vibrio alginolyticus 12G01] Length = 320 Score = 209 bits (532), Expect = 1e-51, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 102/288 (35%), Gaps = 17/288 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + I L+++ +Q + V E E+ + S+A L Sbjct: 1 MDSQRN-ILLIGLALVSFLLFQQWQVAKNPEPQAVEQAQSSSTL----PAPSFADELDPV 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Q + + + + L SI+ G NL Y ++ S+ V L + + Sbjct: 56 PGQQQASAKTITVTTDVLTLSIDTVGGDVVHANLNEYSAELDSSDSFVLL--KDAQGHQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I+L ++N +S T + + F AN I + +T Sbjct: 114 IAQSGLVGPQG-IDLSSTNRPHYNVSADRFTMADGQDELRVPMTFT-ANGIEYTKTYIFK 171 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y + V NNS + F + ++ + T G D + Sbjct: 172 RGSYALNVEYDVVNNSGNNATFGMYAHLRQNLMDDGGSITMPTYRGGAYSTEDTRYKKYS 231 Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + D++ ++S N + W + Y+A+ +IP E + + + + Sbjct: 232 FDDMQDRNLSLNLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGN 279 >gi|239930179|ref|ZP_04687132.1| putative inner membrane protein translocase component YidC [Streptomyces ghanaensis ATCC 14672] gi|291438521|ref|ZP_06577911.1| membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291341416|gb|EFE68372.1| membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 421 Score = 209 bits (531), Expect = 2e-51, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 126/279 (45%), Gaps = 38/279 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+++ G +G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITTPVSWVIVQFHSVYGAVFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKND-RQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNS 126 Query: 450 S-------------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 LE LAA + + + + I ++ Sbjct: 127 IASNDTIGVINERLLESAQKAHIFGAP-LAAKFTDSSEKVAALNSSLTDVRVVTAIMIVL 185 Query: 497 MSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 MSLS F + P + Q M++ P++F +FP G+++YW +NV Sbjct: 186 MSLSQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPIIFAVFGINFPVGVLVYWLTTNV 245 Query: 548 ISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYNSQ 581 ++ QQ I+ + A+ ++RL ++N ++ Sbjct: 246 WTMGQQMYIIHNNPTPGSKAQAAYLERLSKHVARNGKTR 284 >gi|148982293|ref|ZP_01816700.1| putative inner membrane protein translocase component YidC [Vibrionales bacterium SWAT-3] gi|145960558|gb|EDK25915.1| putative inner membrane protein translocase component YidC [Vibrionales bacterium SWAT-3] Length = 291 Score = 208 bits (530), Expect = 2e-51, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 102/288 (35%), Gaps = 17/288 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + + + + Q SYA L Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQW----NVAKNPAPQAVEQAQSGSTLPAPSYADDLDPA 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Q S + + + L SI+ G NL Y + S V L + + + Sbjct: 56 PGQVASSAKTITVTTDVLTLSIDTVGGDVVTANLNDYSAEFDSEESFVLL--KNEPGHQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ V I+L ++N +S T I + ++ AN + + +T L Sbjct: 114 IAQSGLVGPQG-IDLSSTNRPSYTVSADSFTLADGQDELRIPMTYQ-ANGLDYTKTFILK 171 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y + V NNS + F + ++ + T G D + Sbjct: 172 RGSYAIDVEYDVVNNSGNNATFGMYAHLRQNVMDDGGSLTMPTYRGGAYSTEDTRYKKYS 231 Query: 234 YSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + D++ ++S N W + Y+AS +IP E + + + + Sbjct: 232 FDDMQDRNLSLNLANGQGWAAMIQHYFASAWIPRDEAGSNLYTRVIGN 279 >gi|256786609|ref|ZP_05525040.1| putative inner membrane protein translocase component YidC [Streptomyces lividans TK24] gi|289770501|ref|ZP_06529879.1| membrane protein oxaA [Streptomyces lividans TK24] gi|289700700|gb|EFD68129.1| membrane protein oxaA [Streptomyces lividans TK24] Length = 431 Score = 208 bits (529), Expect = 3e-51, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 128/281 (45%), Gaps = 42/281 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G +G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITWPVSWVIVQFHTVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRGM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLN- 125 Query: 450 SLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPF-------------YLPGFMHVGIWP 494 + G I L +A +IF F + + Sbjct: 126 --GIASGDTIGKINQPLLESAQKAHIFGAPLAAKFTDGASKVESLGASLTDVRVITAVMI 183 Query: 495 IIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MS S F + P + Q M++ PV+F +FP G+++YW + Sbjct: 184 VLMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTT 243 Query: 546 NVISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYNSQ 581 NV ++ QQ +++ + A+ ++RL + +++ ++ Sbjct: 244 NVWTMGQQMYVIRNNPTPGSKAQASYLERLHKSVTEHGRTR 284 >gi|21222290|ref|NP_628069.1| putative inner membrane protein translocase component YidC [Streptomyces coelicolor A3(2)] gi|38502851|sp|O54569|OXAA_STRCO RecName: Full=Membrane protein oxaA gi|6539748|gb|AAF16008.1|AF187159_8 Orf431 [Streptomyces coelicolor A3(2)] gi|2898107|gb|AAC03487.1| inner membrane protein [Streptomyces coelicolor A3(2)] gi|4808379|emb|CAB42700.1| putative membrane protein [Streptomyces coelicolor A3(2)] Length = 431 Score = 208 bits (529), Expect = 3e-51, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 128/281 (45%), Gaps = 42/281 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G +G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITWPVSWVIVQFHTVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRGM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLN- 125 Query: 450 SLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPF-------------YLPGFMHVGIWP 494 + G I L +A +IF F + + Sbjct: 126 --GIASGDTIGKINQPLLESAQKAHIFGAPLAAKFTDGASKVESLGASLTDVRVITAVMI 183 Query: 495 IIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MS S F + P + Q M++ PV+F +FP G+++YW + Sbjct: 184 VLMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTT 243 Query: 546 NVISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYNSQ 581 NV ++ QQ +++ + A+ ++RL + +++ ++ Sbjct: 244 NVWTMGQQMYVIRNNPTPGSKAQASYLERLHKSVTEHGRTR 284 >gi|159901883|gb|ABX10617.1| 60 kDa inner membrane insertion protein [uncultured planctomycete 6N14] Length = 818 Score = 208 bits (529), Expect = 3e-51, Method: Composition-based stats. Identities = 92/381 (24%), Positives = 171/381 (44%), Gaps = 53/381 (13%) Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE------ 293 ++ S++G+ +Y+ F+P++ + + G A A ++ Sbjct: 428 DDGADDSRDLSYVGVDSQYFTVAFVPAEGQASLTTLDRGGAGIASDPAAIIKHQERAVNS 487 Query: 294 --------ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 ++ PG S+ LFAG K + Y + I +GWF IAK Sbjct: 488 TFYVDTLSKSLEPGGSMRQDLRLFAGPKYTSLLTQY-------GLQDCIYYGWFSAIAKF 540 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + L+ + VGN+ +AI+L T+ V+ FPL++K V+ M+ + P++ ++ EK+K Sbjct: 541 LGGLLHGL-SAVGNYALAIILLTLLVRGCMFPLSRKAAVNAQRMQELAPEMKKINEKYKD 599 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---WI 462 L KA +L + +NPLAGC P+ +Q+P+F +Y+ +S+++EMR P W Sbjct: 600 DMEGKL-KAQRELQQRVGLNPLAGCLPMFIQLPIFLGLYRTLSVNIEMRQQPALSFSDWA 658 Query: 463 KDLAAADPTNIF--TLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSPPPADKGQ-- 516 +LA D + L+ L G++ + + P+I+ + Q K+ PPA Q Sbjct: 659 SNLAGPDKLAYWGDWLWEYLSGRGTGWLGPYFNVLPVIVVVLYLTQQKLFMPPATDEQTA 718 Query: 517 --AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI---------- 564 +++ M ++ PAGL IY+ S+ I ++ ++ + ++ Sbjct: 719 LTQKMMSVMTLMMGLFFFRVPAGLCIYFITSSAWGICERIIVKRTLPSKKHFDLAGLEGG 778 Query: 565 ---------GLIDRLRSTFSK 576 L +R+RS +K Sbjct: 779 KGAAPVKSQSLAERIRSQVAK 799 >gi|153827655|ref|ZP_01980322.1| inner membrane protein OxaA [Vibrio cholerae MZO-2] gi|149737868|gb|EDM52773.1| inner membrane protein OxaA [Vibrio cholerae MZO-2] Length = 175 Score = 207 bits (528), Expect = 3e-51, Method: Composition-based stats. Identities = 76/190 (40%), Positives = 112/190 (58%), Gaps = 21/190 (11%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 +PL K QY S A M+ +QPK+ +RE+ Q + + M++LYK +NPL GC PIL Sbjct: 1 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD-RQRMSQEMMELYKKEKVNPLGGCLPIL 59 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP I P Sbjct: 60 LQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYIL-------------------P 100 Query: 495 IIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++M SMF+ KMSP D Q I+ +MPV+F F FP+GL++YW SN+++++QQ Sbjct: 101 LLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQ 160 Query: 554 AVIMKMHGAE 563 +I K + Sbjct: 161 TLIYKALEKK 170 >gi|147679254|ref|YP_001213469.1| preprotein translocase subunit YidC [Pelotomaculum thermopropionicum SI] gi|146275351|dbj|BAF61100.1| preprotein translocase subunit YidC [Pelotomaculum thermopropionicum SI] Length = 222 Score = 207 bits (526), Expect = 5e-51, Method: Composition-based stats. Identities = 79/228 (34%), Positives = 126/228 (55%), Gaps = 25/228 (10%) Query: 338 WFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 F I M L+++ Y L + ++GIAI+L T+ VK++ +PL+ KQ S M+ I Sbjct: 3 IFSSIVNGMTWLLNWLYQLTVAAGLPSYGIAIILLTIIVKMVLYPLSHKQMKSMLAMQQI 62 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E++EK+K P+ +Q+A+++LY+ HN+NP AGC P+L+Q+P+ A+Y+ + Sbjct: 63 QPKVKEIQEKWKNKDPKKMQQAIMELYREHNVNPAAGCLPLLIQMPILIALYRSLFNFPY 122 Query: 453 MRHAP-FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 + A + W+ +L+ DP I PI+ ++ F+Q KM+ Sbjct: 123 INTAHAVFLWVPNLSVKDPYYIL-------------------PILAGVTTFLQSKMTTTT 163 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +D Q M+L MPV + S PAGL +YW N+ IVQQ I K Sbjct: 164 SDPTQRMMLYTMPVFIAWIAGSVPAGLALYWVVFNIGGIVQQYFINKQ 211 >gi|290959008|ref|YP_003490190.1| hypothetical protein SCAB_45861 [Streptomyces scabiei 87.22] gi|260648534|emb|CBG71645.1| putative membrane protein [Streptomyces scabiei 87.22] Length = 421 Score = 206 bits (525), Expect = 6e-51, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 126/280 (45%), Gaps = 40/280 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G +G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITTPVSWVIVQFHTVYGAVFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNS 126 Query: 450 SLE--------------MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 + A +G LAA + + + + + + Sbjct: 127 IANNDTIGVINQSLLESAQKAHIFG--APLAAKFTDSTADVVALDASLTTVRIVTAVMIV 184 Query: 496 IMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 +MS S F + P + Q M++ PV+F +FP G+++YW +N Sbjct: 185 LMSASQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTN 244 Query: 547 VISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYNSQ 581 V ++ QQ ++ + A+ ++RL +++ ++ Sbjct: 245 VWTMGQQMYVIHNNPTPGSKAQAAYLERLFKHVTRHGKTR 284 >gi|328883706|emb|CCA56945.1| Inner membrane protein translocase component YidC, long form [Streptomyces venezuelae ATCC 10712] Length = 441 Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats. Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 42/281 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G +G++I+ V +++ PL KQ ST NM Sbjct: 8 FSFITTPVSWVIVQFHKVYGAIFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QALQPKMKAIQERYKSDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSS 126 Query: 450 SLEMRHAPFWGWIKD--LAAADPTNIFT-------------LFGILPFYLPGFMHVGIWP 494 + G I D LA+A +IF + + + I Sbjct: 127 ---IASGKTIGVIDDSLLASARQAHIFGAPLASKFTDSAAEVAALDASLTSVRIVTAIMI 183 Query: 495 IIMSLSMFIQMKMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MS S F + P + Q M++ PV+F +FP G+++YW + Sbjct: 184 VLMSASQFFTQRQLMMKNVDLSVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTT 243 Query: 546 NVISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYNSQ 581 NV ++ QQ ++ + A+ + RL + +++ + Sbjct: 244 NVWTMGQQMYVINQNPTPGSKAQDSYLQRLLKSVTQHGEVR 284 >gi|291452650|ref|ZP_06592040.1| membrane protein oxaA [Streptomyces albus J1074] gi|291355599|gb|EFE82501.1| membrane protein oxaA [Streptomyces albus J1074] Length = 431 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 123/278 (44%), Gaps = 36/278 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ L G +G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITTPVSWVIVQFHKLYGALFGDDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +++E++K Q + M++LYK NPLA C PILLQ P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKDAGTNPLASCLPILLQSPFFFALYHVLNS 126 Query: 450 SLEMRHAPFWGWI------------KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 + F LAA N + + + + ++M Sbjct: 127 IASNKTIGFIDEALLASAQKAHIVGAPLAAKFTDNADKIEALGSSTTNVHIVTAVMIVLM 186 Query: 498 SLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 S S F + P + Q M++ P++F +FP G+++YW +N+ Sbjct: 187 SASQFFTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLVYWLTTNMW 246 Query: 549 SIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYNSQ 581 ++ QQ +++ + A+ ++R + N + Sbjct: 247 TMGQQMYVIRQNPTPGSKAQAAFLERFLKRITMNPKVR 284 >gi|256425563|ref|YP_003126216.1| hypothetical protein Cpin_6611 [Chitinophaga pinensis DSM 2588] gi|256040471|gb|ACU64015.1| 60 kDa inner membrane insertion protein [Chitinophaga pinensis DSM 2588] Length = 617 Score = 204 bits (520), Expect = 3e-50, Method: Composition-based stats. Identities = 113/609 (18%), Positives = 235/609 (38%), Gaps = 59/609 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE--RKNIQTVKQPNQVDNSYAAVLI 58 M+ N + AL ++ + F + + + +I V +P VD + Sbjct: 1 MD--RNSVIGFALLGVLFVGYIFFNQKQQTAAKREKDRQDSIANVNKPKPVDTAAYVNGG 58 Query: 59 DDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + L+ + L+N L + + +G Q + L+ + Sbjct: 59 VADSSKLASAYGTFAGAANGTIQTAVLENKVLKVTFSSQGGQPTLVQLKQFK---DFEGK 115 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELP-NSNTVWNLISGKILTPTTPIKLVFKNANN 165 + L + S + + + + N +L +V L G + + +L N Sbjct: 116 PLMLANSSFNRISLQVPANNNTQLNTSDLYFTGGSVQQLADG---SQSISYRLPTSNPEQ 172 Query: 166 ILFERTISLD-EHYLFKIV------DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 L E +L + Y + V ++ + + + Q Sbjct: 173 YL-EYVYTLKQDGYAVDFDIHAIGLENVLPSNQKTLSLQWDAENDKQEKDMQNERQNNQV 231 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + V G + Y +++++ + W+ + +++ + FI K+ F+ Sbjct: 232 HYRDVNG-----KHDYFTLQRTTHEKWDNQLQWVSVKQQFFNTTFIARKDAHFNGAEVNA 286 Query: 279 SDGHARYQAKFSANEITILPGKSITTTN--FLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 + + + I ++ T ++ G + T+ ++ L E +I Sbjct: 287 KVPESANIVGQTFTTLEIPYNRAHDFTFPIEIYYGPNHYSTLKSFDNGL-----ESIIPL 341 Query: 337 G--WFYFIAKPMFMLM----SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 G F F+ ++ ++ +GN+G+ I+L T+F++LL P + YVS A MK Sbjct: 342 GSGIFAFVKYVNKWIIIPVFNFLSGFIGNYGLIIILLTIFIRLLIAPFTYQSYVSQAKMK 401 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++P+ID L+ K Q ++L+++ +NPL GC P L+Q+P+ A+Y S Sbjct: 402 VLKPEIDALKAKHGDD-QQAFGVEQMKLFRSAGVNPLGGCLPALMQLPILVAMYSFFPSS 460 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI---QMKM 507 +E+R + W DL+A D +I L +PFY HV ++ ++M+ + + + Sbjct: 461 IELRQES-FLWATDLSAYD--SILNLPFTIPFYG---NHVSLFTLLMTATSLMLAFNNRG 514 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 ++ + P++ + + + L Y+ SNVISI Q I K + Sbjct: 515 MADQSNPVMKYMPYVFPIMLLGIFNRLASALTFYYFLSNVISIGLQWAIQKFFVNHDKIH 574 Query: 568 DRLRSTFSK 576 +++ K Sbjct: 575 AQIQENKKK 583 >gi|239828709|ref|YP_002951333.1| OxaA-like protein precursor [Geobacillus sp. WCH70] gi|239809002|gb|ACS26067.1| 60 kDa inner membrane insertion protein [Geobacillus sp. WCH70] Length = 256 Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats. Identities = 77/227 (33%), Positives = 116/227 (51%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L+ Y N L GNFG++I++ T+F++LL PL +Q + M+ +QP+I Sbjct: 37 WNEYIVYPLSWLIKYVANALGGNFGLSIVIVTIFIRLLILPLMIQQTKNAKAMQALQPEI 96 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+ Y I + E+ Sbjct: 97 QKLREKYSSKDMQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPILIGFYHAIMRTREI 156 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 A DL DP I PI+ ++ FIQ K+ Sbjct: 157 --AEHNFLWFDLGEKDPYFIL-------------------PIVAGITTFIQQKIMMAGAG 195 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MPV+ V +FPA L +YW N+ SIVQ I Sbjct: 196 QQNPQMAMMLWMMPVMIVIFAINFPAALSLYWVVGNIFSIVQTYFIK 242 >gi|302559670|ref|ZP_07312012.1| membrane protein OxaA [Streptomyces griseoflavus Tu4000] gi|302477288|gb|EFL40381.1| membrane protein OxaA [Streptomyces griseoflavus Tu4000] Length = 424 Score = 203 bits (517), Expect = 6e-50, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 124/279 (44%), Gaps = 38/279 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+++ G +G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITTPVSWVIVQFHSVYGAVFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNS 126 Query: 450 S-------------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 LE LAA + + + + I ++ Sbjct: 127 IASNDTIGVINTRLLESAQKAHIFGAP-LAAKFTDSSAKVEALNSSLTDVRVVTAIMIVL 185 Query: 497 MSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 MSLS F + P + Q M++ PV+F +FP G+++YW +NV Sbjct: 186 MSLSQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPVIFAVFGINFPVGVLVYWLTTNV 245 Query: 548 ISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYNSQ 581 ++ QQ ++ + A+ ++RL + ++ Sbjct: 246 WTMGQQMYVIHNNPTPGSKAQAAYLERLTKHVTHQGKTR 284 >gi|239942675|ref|ZP_04694612.1| putative inner membrane protein translocase component YidC [Streptomyces roseosporus NRRL 15998] gi|239989134|ref|ZP_04709798.1| putative inner membrane protein translocase component YidC [Streptomyces roseosporus NRRL 11379] gi|291446136|ref|ZP_06585526.1| membrane protein oxaA [Streptomyces roseosporus NRRL 15998] gi|291349083|gb|EFE75987.1| membrane protein oxaA [Streptomyces roseosporus NRRL 15998] Length = 421 Score = 203 bits (517), Expect = 6e-50, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 35/251 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G +G++I+ V +++ PL KQ ST NM Sbjct: 8 FSFITTPVSWIIVQFHKVYGALFGDDSGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QVLQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSS 126 Query: 450 SLE--------------MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 R A +G LAA ++ + + + I + Sbjct: 127 IASGKKIGAINQDLLDSARQAHIFG--APLAAKFTDSVEKVTSLDASLTDVRIVTAIMIV 184 Query: 496 IMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 +MS S F + P + Q M++ PV+F +FP G+++YW +N Sbjct: 185 LMSASQFFTQRQLMTKNVDLTVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTN 244 Query: 547 VISIVQQAVIM 557 V ++ QQ ++ Sbjct: 245 VWTMGQQMYVI 255 >gi|302552691|ref|ZP_07305033.1| membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302470309|gb|EFL33402.1| membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 428 Score = 203 bits (517), Expect = 6e-50, Method: Composition-based stats. Identities = 66/276 (23%), Positives = 127/276 (46%), Gaps = 36/276 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+++ G +G++I+ + +++ PL KQ ST M Sbjct: 8 FSFITTPVSWVIVQFHSVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKSTRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS- 448 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNG 126 Query: 449 ---------ISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 I+ + + I LAA + + + + I ++M Sbjct: 127 IATGDTIGVINQSLLQSAQKAHIVGAPLAAKFTDSSSKVEALGASLTDVRVVTAIMIVLM 186 Query: 498 SLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 S S F + P + Q M++ PV+F +FP G+++YW +NV Sbjct: 187 SASQFFTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVW 246 Query: 549 SIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYN 579 ++ QQ +++ + A+ ++RL +++ Sbjct: 247 TMGQQMYVIRNNPTPGSKAQAAYLERLVHHVTQHGK 282 >gi|125569047|gb|EAZ10562.1| hypothetical protein OsJ_00395 [Oryza sativa Japonica Group] Length = 952 Score = 203 bits (516), Expect = 8e-50, Method: Composition-based stats. Identities = 74/252 (29%), Positives = 129/252 (51%), Gaps = 26/252 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ + +++ + + ++G AI+L TV VK PL K+Q ST M+ Sbjct: 575 GWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQ 634 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QP+I +++++ + + +Q +LYK +NPLAGC+P L IPV+ +Y+ +S Sbjct: 635 NLQPQIKAIQQRYAGN-QERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 693 Query: 451 L-EMRHAPFWGWIKDLAAADPT----NIFTLFGILPFYLPGFMHVGI--------WPIIM 497 E + WI L + + +LPF + G +G P+++ Sbjct: 694 ANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLLPF-VDGHPPLGWHDTICYLVLPVLL 752 Query: 498 SLSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 S F+ M++ PP D Q ++L ++P + + S P+GL IYW +N++S Q Sbjct: 753 VASQFVSMEIMKPPQTDDPSQKNTLLVLKFLPFMIGWFSLSVPSGLSIYWFTNNILSTAQ 812 Query: 553 QAVIMKMHGAEI 564 Q + K+ GA+ Sbjct: 813 QVWLRKLGGAKP 824 >gi|297193299|ref|ZP_06910697.1| membrane protein oxaA [Streptomyces pristinaespiralis ATCC 25486] gi|197718384|gb|EDY62292.1| membrane protein oxaA [Streptomyces pristinaespiralis ATCC 25486] Length = 432 Score = 202 bits (515), Expect = 1e-49, Method: Composition-based stats. Identities = 74/276 (26%), Positives = 122/276 (44%), Gaps = 38/276 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ L G +G++I+ + +++ PL KQ ST NM Sbjct: 8 FSFITTPVSWIIVQFHKLYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKSTRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QALQPKMKAIQERYKND-RQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSK 126 Query: 450 SLE--------------MRHAPFWG-WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 R+A +G I DP+ + L L + I Sbjct: 127 IASGNEIGVLNQSLVDSARNAHIFGAPIASKFMDDPSKVEALNASLT---DVRIVTAIMI 183 Query: 495 IIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 I+MS S F + P + Q M++ P++F +FP G+++YW + Sbjct: 184 ILMSASQFYTQRQLMQKNVDLTVKTPYMQQQKMLMYIFPLIFAVMGINFPVGVLVYWLTT 243 Query: 546 NVISIVQQ-AVIMKMHGAEIGLIDRLRSTFSKNYNS 580 NV ++ QQ VI + D+ K+ + Sbjct: 244 NVWTMGQQMYVINQNPTPGSKAQDQYLQRLLKSVTA 279 >gi|310830139|ref|YP_003962496.1| 60 kDa inner membrane insertion protein [Eubacterium limosum KIST612] gi|308741873|gb|ADO39533.1| 60 kDa inner membrane insertion protein [Eubacterium limosum KIST612] Length = 307 Score = 202 bits (515), Expect = 1e-49, Method: Composition-based stats. Identities = 69/241 (28%), Positives = 124/241 (51%), Gaps = 20/241 (8%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + + + ++ YN V N+G+A++L T+ VK PL KQ S M+ +QP++ +L Sbjct: 2 HILYQAFGFVLFQIYNFVQNYGVAVILFTILVKFCILPLNIKQTKSMREMQALQPELQKL 61 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY--------KVISISL 451 ++K+K +P + L + ++LYK +N++P+AGC P+L+Q+P+ +A++ V + Sbjct: 62 QKKYKNNP-EKLNQETMKLYKLYNVSPMAGCLPLLIQLPIIYALFGALRDPGKWVFTNGD 120 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 + + WI DL DP I + ++ + I +M +Q P Sbjct: 121 VSAISQQFLWIPDLGNPDPWYILPILCVVFTF-----------ITQKFTMSVQKGTMDPS 169 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 A+K Q M+L MP+ FA PAG+ +YW NV + VQQ ++++ +I + R Sbjct: 170 AEKTQNMMLYIMPIFIGFAAIGMPAGVALYWVVQNVFTFVQQFIMLRKPAEKIDPREAER 229 Query: 572 S 572 Sbjct: 230 R 230 >gi|297200935|ref|ZP_06918332.1| membrane protein [Streptomyces sviceus ATCC 29083] gi|197716893|gb|EDY60927.1| membrane protein [Streptomyces sviceus ATCC 29083] Length = 428 Score = 202 bits (515), Expect = 1e-49, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 40/280 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G +G++I+ + +++ PL KQ ST M Sbjct: 8 FSFITTPVSWVIVQFHTVYGKIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKSTRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-- 447 + +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+ Sbjct: 68 QTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNG 126 Query: 448 ------------SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 S+ R A +G LAA T+ + + + + Sbjct: 127 IATGDTIGVINESLLASARKAHIFG--APLAAKFKDGSATVQALGATVTDVRVVTAVMIV 184 Query: 496 IMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 +MS S F + P + Q M++ PV+F +FP G+++YW +N Sbjct: 185 MMSASQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTN 244 Query: 547 VISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYNSQ 581 V ++ QQ ++ + A+ ++RL + + ++ Sbjct: 245 VWTMGQQMYVIHNNPTPGSKAQAAYLERLTKHVTSHGKAR 284 >gi|294813736|ref|ZP_06772379.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] gi|326442157|ref|ZP_08216891.1| putative inner membrane protein translocase component YidC [Streptomyces clavuligerus ATCC 27064] gi|294326335|gb|EFG07978.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 415 Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats. Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 33/250 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ L G +G++I+ V +++ PL KQ S NM Sbjct: 8 FSFITTPVSWIIVQFHKLYGAMFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSMRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QALQPKMKAIQERYKND-RQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYYVLSN 126 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-------------YLPGFMHVGIWPII 496 + L +A +IF F + + ++ Sbjct: 127 IASGKTVGVINESL-LESARQAHIFGAPLAAKFMDSEAKVASLDASLTTVRIVTAVMIVL 185 Query: 497 MSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 MS S F + P + Q M++ PV+F +FP G+++YW +NV Sbjct: 186 MSASQFYTQRQLMQKNVDLSVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNV 245 Query: 548 ISIVQQAVIM 557 ++ QQ ++ Sbjct: 246 WTMGQQMYVI 255 >gi|228994205|ref|ZP_04154105.1| Membrane protein oxaA 1 [Bacillus pseudomycoides DSM 12442] gi|228765657|gb|EEM14311.1| Membrane protein oxaA 1 [Bacillus pseudomycoides DSM 12442] Length = 246 Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats. Identities = 79/227 (34%), Positives = 124/227 (54%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQVLQPEM 86 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLYKTH +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 AKLKEKYSSKDQATQQKLQQEMMQLYKTHGVNPLAGCLPIFIQMPILFAFYHAIMRTAEI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 + F + DL ADP I PI+ +++ FIQ K++ Sbjct: 147 KQHSFLWF--DLGHADPYYIL-------------------PIVAAITTFIQQKLAMAGTA 185 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 186 GQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIAQMYMIK 232 >gi|228995394|ref|ZP_04155066.1| Membrane protein oxaA 1 [Bacillus mycoides Rock3-17] gi|229003008|ref|ZP_04160867.1| Membrane protein oxaA 1 [Bacillus mycoides Rock1-4] gi|228758236|gb|EEM07422.1| Membrane protein oxaA 1 [Bacillus mycoides Rock1-4] gi|228764347|gb|EEM13222.1| Membrane protein oxaA 1 [Bacillus mycoides Rock3-17] Length = 246 Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats. Identities = 79/227 (34%), Positives = 124/227 (54%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLYKTH +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 AKLKEKYSSKDQATQQKLQQEMMQLYKTHGVNPLAGCLPIFIQMPILFAFYHAIMRTAEI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 + F + DL ADP I PI+ +++ FIQ K++ Sbjct: 147 KQHSFLWF--DLGHADPYYIL-------------------PIVAAITTFIQQKLAMAGTA 185 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 186 GQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIAQMYMIK 232 >gi|182437489|ref|YP_001825208.1| putative inner membrane protein translocase component YidC [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466005|dbj|BAG20525.1| putative membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 419 Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 35/251 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G +G++I+ V +++ PL KQ ST NM Sbjct: 8 FSFITTPVSWVIVQFHKVYGALFGDDSGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QVLQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSS 126 Query: 450 SLE--------------MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 R A +G LAA ++ + + + I + Sbjct: 127 IASGKKIGAINQDLLDSARQAHIFG--APLAAKFTDSVEKVTSLDASLTDVRIVTAIMIV 184 Query: 496 IMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 +MS S F + P + Q M++ PV+F +FP G+++YW +N Sbjct: 185 LMSASQFFTQRQLMTKNVDLTVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTN 244 Query: 547 VISIVQQAVIM 557 V ++ QQ ++ Sbjct: 245 VWTMGQQMYVI 255 >gi|330444486|ref|YP_004377472.1| 60 kDa inner membrane protein [Chlamydophila pecorum E58] gi|328807596|gb|AEB41769.1| 60 kDa inner membrane protein [Chlamydophila pecorum E58] Length = 714 Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats. Identities = 86/323 (26%), Positives = 154/323 (47%), Gaps = 24/323 (7%) Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 +AS+++P + + LP ++ ++ ++AG P++ Sbjct: 383 FASLYLPGSVLPTRLTLLEPRNQAFPAAKYPGYETLMPLPKEAGSSKFLVYAGPLAEPSL 442 Query: 319 HHYEKDLAIPRFEMLIDW------GWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTT 368 +K E G+ FI P +F++M +F L G++G++I+L T Sbjct: 443 KTLDKTFTKENGENPQYLSCISLRGFLSFITAPFASLLFVIMKFFKALTGSWGLSIVLLT 502 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 VF+KLL +PL S M+ + P I ++++K+K+ P + Q ++ LYK + +NP+ Sbjct: 503 VFLKLLLYPLNAWSIRSMRRMQKLSPYIQQIQQKYKKEPRRA-QMEVMALYKANKVNPIT 561 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+Q+P A++ ++ S +R A + GWI +L A D +F+ + F F Sbjct: 562 GCLPLLIQLPFLIAMFDLLKSSFLLRGASLFPGWIDNLTAPD--VLFSWQHPIWFIGNEF 619 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-------NWMPVVFVFALSSFPAGLII 540 + PII+ L MF+Q KM+ M ++F +FP+GL I Sbjct: 620 HVL---PIILGLVMFVQQKMTNYNKQGQMTEQQRQQQTMGTVMAILFTAMFYNFPSGLNI 676 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW S ++ I+QQ V K+ ++ Sbjct: 677 YWLSSMILGIIQQWVTNKVLDSK 699 >gi|326778144|ref|ZP_08237409.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf. griseus XylebKG-1] gi|326658477|gb|EGE43323.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf. griseus XylebKG-1] Length = 419 Score = 201 bits (511), Expect = 3e-49, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 35/251 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G +G++I+ V +++ PL KQ ST NM Sbjct: 8 FSFITTPVSWVIVQFHKVYGALFGDDSGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QVLQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSS 126 Query: 450 SLE--------------MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 R A +G LAA ++ + + + I + Sbjct: 127 IASGKKIGAINQDLLDSARQAHIFG--APLAAKFTDSVEKVTSLDASLTDVRIVTAIMIV 184 Query: 496 IMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 +MS S F + P + Q M++ PV+F +FP G+++YW +N Sbjct: 185 LMSASQFFTQRQLMTKNVDLTVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTN 244 Query: 547 VISIVQQAVIM 557 V ++ QQ ++ Sbjct: 245 VWTMGQQMYVI 255 >gi|227536313|ref|ZP_03966362.1| inner membrane protein translocase component YidC [Sphingobacterium spiritivorum ATCC 33300] gi|227243828|gb|EEI93843.1| inner membrane protein translocase component YidC [Sphingobacterium spiritivorum ATCC 33300] Length = 389 Score = 201 bits (511), Expect = 3e-49, Method: Composition-based stats. Identities = 77/365 (21%), Positives = 156/365 (42%), Gaps = 29/365 (7%) Query: 228 SLVEQKYSDIEK--SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 E +++ + +W+ Y++S+ + + Sbjct: 20 KTAENNVDHLKESGDDDDQLDKRLTWIAFKQHYFSSILTSKTGFASADLDVKTAAEADIV 79 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----- 340 + + ++ K + F G ++ + +I+ GW Sbjct: 80 KLYSAKAKLDFSNQKDNQYSFNFFFGPNKYNILKAQNDGSN-----SIINMGWGPMRWIN 134 Query: 341 -FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +I P+F + F+ ++GI I++ T+ +K + FPL K Y S A M+ ++P++DE+ Sbjct: 135 QWITVPVFNFLDGFH---MSYGIVILILTILLKGVLFPLTYKSYQSMAKMRVLKPQLDEI 191 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 + K + +LQ+ ++LYK +NPL GC P++LQ+P A + E+R + Sbjct: 192 KAKVGEDNAVLLQQEQMKLYKQAGVNPLGGCLPLVLQMPFTIAFFYFFPNLFELRGES-F 250 Query: 460 GWIKDLAAAD-PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK--GQ 516 W+KDL+ D P +FGI HV + ++M+L+ + + + Sbjct: 251 LWVKDLSTYDSPITFPAIFGID--------HVSLMCVLMTLTTLLTTWYNNATSGATGQM 302 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 I +MP++F F L+SFPAGL Y+ V + + Q +I + + ++ ++ + Sbjct: 303 KYIGYFMPLIFFFVLNSFPAGLNYYYFLGAVFTFLTQLLI-RSFVDDDKILAKIEENKKR 361 Query: 577 NYNSQ 581 + + Sbjct: 362 PESEK 366 >gi|56420357|ref|YP_147675.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426] gi|56380199|dbj|BAD76107.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426] Length = 249 Score = 201 bits (510), Expect = 4e-49, Method: Composition-based stats. Identities = 70/232 (30%), Positives = 119/232 (51%), Gaps = 28/232 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ PM L+ + G N+GIAI++ T+ V+ PL KQ+ ++ M+ ++P++ Sbjct: 32 WNHYFVYPMSKLLLTLGHWFGDNYGIAIIVLTLIVRFCLLPLILKQFRASLAMQKLRPEL 91 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+K P+ LQ+ M+QLY+ H +NP +GC P+L+Q+P+F A+Y IS + E+ Sbjct: 92 LKLQEKYKSKDPETQRKLQQEMMQLYQKHGVNPASGCLPVLIQMPIFMALYYAISRTQEI 151 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-- 511 + +L DP I P++ +L+ FI +++SP Sbjct: 152 KTHS--FLWVELGHRDPYFIL-------------------PVLAALTTFISLRLSPSMAE 190 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 AM+L MPV+ SS P+ L +YW SI+Q ++ A Sbjct: 191 EQMPQMAMMLYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLILRSQLKA 242 >gi|320009746|gb|ADW04596.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces flavogriseus ATCC 33331] Length = 418 Score = 201 bits (510), Expect = 4e-49, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 37/252 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ L G +G++I+ V +++ PL KQ ST NM Sbjct: 8 FSFITTPVSWVIVQFHKLYGALFGDDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QVLQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLS- 125 Query: 450 SLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPF-------------YLPGFMHVGIWP 494 + G I L +A +IF F + I Sbjct: 126 --AIASGKTIGVIDQPLLDSARQAHIFGAPLAAKFMDSEEKVSALGASLTDVRVVTAIMI 183 Query: 495 IIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MS S F + P + Q M++ PV+F +FP G+++YW + Sbjct: 184 VMMSASQFFTQRQLMTKNVDLTVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTT 243 Query: 546 NVISIVQQAVIM 557 NV ++ QQ ++ Sbjct: 244 NVWTMGQQMYVI 255 >gi|152977685|ref|YP_001377202.1| OxaA-like protein precursor [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026437|gb|ABS24207.1| 60 kDa inner membrane insertion protein [Bacillus cytotoxicus NVH 391-98] Length = 255 Score = 200 bits (509), Expect = 5e-49, Method: Composition-based stats. Identities = 77/227 (33%), Positives = 123/227 (54%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ H +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKHGVNPLAGCLPIFIQMPILFAFYHAIMRTAEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 + F + DL ADP I PI+ +++ FIQ K++ Sbjct: 156 KQHSFLWF--DLGHADPYYIL-------------------PIVAAITTFIQQKIAMTGTV 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 GQNPQMAMMVWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYMIK 241 >gi|42784682|ref|NP_981929.1| OxaA-like protein precursor [Bacillus cereus ATCC 10987] gi|42740614|gb|AAS44537.1| stage III sporulation protein J [Bacillus cereus ATCC 10987] Length = 255 Score = 200 bits (509), Expect = 5e-49, Method: Composition-based stats. Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+++QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQSLQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFIQMPILFAFYHAIMRTAEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 + F + DL ADP I PI+ +++ FIQ K++ Sbjct: 156 KQHSFLWF--DLGHADPYYIL-------------------PIVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q I Sbjct: 195 GQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYFIK 241 >gi|225434998|ref|XP_002284077.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 455 Score = 199 bits (507), Expect = 7e-49, Method: Composition-based stats. Identities = 77/252 (30%), Positives = 132/252 (52%), Gaps = 26/252 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ M +++ + + +G AI+L TV VK+ +PL KKQ ST M+ Sbjct: 101 GWFGFISEGMEVVLKVLEDGLTAVHVPYAYGFAIILLTVIVKIATYPLTKKQVESTLAMQ 160 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QPKI ++E++K + + +Q +LYK +NPLAGC+P L IPV+ +Y+ +S Sbjct: 161 NLQPKIKAIQERYKGN-QERIQLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 219 Query: 451 L-EMRHAPFWGWIKDLAAADPT----NIFTLFGILPFYLPGFMHVGI--------WPIIM 497 E + WI L + + ++PF + G +G P+++ Sbjct: 220 ANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLIPF-VDGHPPLGWQDTAAYLVLPVLL 278 Query: 498 SLSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +S ++ M++ PP D Q ++ ++P++ + S P+GL IYW +NV+S Q Sbjct: 279 VISQYVSMELMKPPQTDDPSQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQ 338 Query: 553 QAVIMKMHGAEI 564 Q + K+ GA+ Sbjct: 339 QVWLRKLGGAKP 350 >gi|254724144|ref|ZP_05185929.1| OxaA-like protein precursor [Bacillus anthracis str. A1055] Length = 255 Score = 199 bits (507), Expect = 9e-49, Method: Composition-based stats. Identities = 77/227 (33%), Positives = 122/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QPK+ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPKM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF--DLGQADPYYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 GQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLIK 241 >gi|282863323|ref|ZP_06272382.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE] gi|282561658|gb|EFB67201.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE] Length = 423 Score = 199 bits (507), Expect = 9e-49, Method: Composition-based stats. Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 36/275 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ L G +G++I+ V +++ PL KQ ST NM Sbjct: 8 FSFITTPVSWVIVQFHKLYGAIFGDDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QVLQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSA 126 Query: 450 SLE--------------MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 R A +G D + G + I + Sbjct: 127 IASGKTIGVIDQPLLDSARQAHIFGAPLAAKFMDSDDKVAALGA--SLTDVRVVTAIMIV 184 Query: 496 IMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 +MS S F + P + Q M++ P++F +FP G+++YW +N Sbjct: 185 MMSASQFFTQRQLMTKNVDLTVKTPYMQQQKMLMYIFPLIFAVMGINFPVGVLVYWLTTN 244 Query: 547 VISIVQQ-AVIMKMHGAEIGLIDRLRSTFSKNYNS 580 V ++ QQ VI + ++ S K+ + Sbjct: 245 VWTMGQQMYVINQNPTPGSKAQEQYLSRLLKSVTT 279 >gi|134301155|ref|YP_001114651.1| 60 kDa inner membrane insertion protein [Desulfotomaculum reducens MI-1] gi|134053855|gb|ABO51826.1| protein translocase subunit yidC [Desulfotomaculum reducens MI-1] Length = 229 Score = 199 bits (507), Expect = 9e-49, Method: Composition-based stats. Identities = 68/228 (29%), Positives = 121/228 (53%), Gaps = 24/228 (10%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFG-----IAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +GWF I M LM++ Y +FG +AI+L T+F+K++ +PL+KKQ S M+ Sbjct: 2 FGWFDAIVDGMTALMNWLYGFTVSFGFPSYALAIILLTIFIKVVLYPLSKKQMHSMVMMQ 61 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P+I +++K+K PQ++Q+ +++LYK HN+NP+AGC P+L+Q+P+ A+Y+ + Sbjct: 62 KLAPEIKAIQDKYKNKDPQMMQQKIMELYKEHNVNPMAGCLPLLVQMPILIALYRALYAF 121 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 D A + G +P ++ + + ++Q K++ Sbjct: 122 P--------FKNPDHAHFFWVESLSKTGDIPL-----------ALLAAATTYLQSKLTTN 162 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D+ Q +L MP+ + + PAGL +YW N + +QQ +I K Sbjct: 163 TQDQTQKTMLYTMPLFIGWIAHTVPAGLALYWVVFNTVGAIQQWIINK 210 >gi|30265504|ref|NP_847881.1| OxaA-like protein precursor [Bacillus anthracis str. Ames] gi|47778431|ref|YP_022422.2| OxaA-like protein precursor [Bacillus anthracis str. 'Ames Ancestor'] gi|49188323|ref|YP_031576.1| OxaA-like protein precursor [Bacillus anthracis str. Sterne] gi|49481123|ref|YP_039476.1| OxaA-like protein precursor [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52145294|ref|YP_086751.1| OxaA-like protein precursor [Bacillus cereus E33L] gi|65317467|ref|ZP_00390426.1| COG0706: Preprotein translocase subunit YidC [Bacillus anthracis str. A2012] gi|118480513|ref|YP_897664.1| OxaA-like protein precursor [Bacillus thuringiensis str. Al Hakam] gi|165873027|ref|ZP_02217648.1| stage III sporulation protein J [Bacillus anthracis str. A0488] gi|167635063|ref|ZP_02393380.1| stage III sporulation protein J [Bacillus anthracis str. A0442] gi|167641749|ref|ZP_02399992.1| stage III sporulation protein J [Bacillus anthracis str. A0193] gi|170689464|ref|ZP_02880654.1| stage III sporulation protein J [Bacillus anthracis str. A0465] gi|170707538|ref|ZP_02897991.1| stage III sporulation protein J [Bacillus anthracis str. A0389] gi|177655281|ref|ZP_02936835.1| stage III sporulation protein J [Bacillus anthracis str. A0174] gi|190569283|ref|ZP_03022177.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I] gi|196036094|ref|ZP_03103494.1| stage III sporulation protein J [Bacillus cereus W] gi|196041960|ref|ZP_03109247.1| stage III sporulation protein J [Bacillus cereus NVH0597-99] gi|196045495|ref|ZP_03112726.1| stage III sporulation protein J [Bacillus cereus 03BB108] gi|218906678|ref|YP_002454512.1| stage III sporulation protein J [Bacillus cereus AH820] gi|227818255|ref|YP_002818264.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684] gi|228918098|ref|ZP_04081626.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930492|ref|ZP_04093492.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936766|ref|ZP_04099557.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229124989|ref|ZP_04254163.1| Membrane protein oxaA 1 [Bacillus cereus 95/8201] gi|229187715|ref|ZP_04314851.1| Membrane protein oxaA 1 [Bacillus cereus BGSC 6E1] gi|229601905|ref|YP_002869695.1| stage III sporulation protein J [Bacillus anthracis str. A0248] gi|254687073|ref|ZP_05150931.1| OxaA-like protein precursor [Bacillus anthracis str. CNEVA-9066] gi|254735161|ref|ZP_05192871.1| OxaA-like protein precursor [Bacillus anthracis str. Western North America USA6153] gi|254742130|ref|ZP_05199817.1| OxaA-like protein precursor [Bacillus anthracis str. Kruger B] gi|254755960|ref|ZP_05207992.1| OxaA-like protein precursor [Bacillus anthracis str. Vollum] gi|254761360|ref|ZP_05213382.1| OxaA-like protein precursor [Bacillus anthracis str. Australia 94] gi|38502943|sp|Q81JH1|OXAA1_BACAN RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|30260182|gb|AAP29367.1| stage III sporulation protein J [Bacillus anthracis str. Ames] gi|47552136|gb|AAT34897.2| stage III sporulation protein J [Bacillus anthracis str. 'Ames Ancestor'] gi|49182250|gb|AAT57626.1| stage III sporulation protein J [Bacillus anthracis str. Sterne] gi|49332679|gb|AAT63325.1| stage III sporulation protein J [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978763|gb|AAU20313.1| stage III sporulation protein J [Bacillus cereus E33L] gi|118419738|gb|ABK88157.1| protein translocase subunit yidC [Bacillus thuringiensis str. Al Hakam] gi|164711239|gb|EDR16795.1| stage III sporulation protein J [Bacillus anthracis str. A0488] gi|167510303|gb|EDR85706.1| stage III sporulation protein J [Bacillus anthracis str. A0193] gi|167529537|gb|EDR92287.1| stage III sporulation protein J [Bacillus anthracis str. A0442] gi|170127534|gb|EDS96408.1| stage III sporulation protein J [Bacillus anthracis str. A0389] gi|170666566|gb|EDT17339.1| stage III sporulation protein J [Bacillus anthracis str. A0465] gi|172080208|gb|EDT65300.1| stage III sporulation protein J [Bacillus anthracis str. A0174] gi|190559590|gb|EDV13581.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I] gi|195991261|gb|EDX55229.1| stage III sporulation protein J [Bacillus cereus W] gi|196023702|gb|EDX62378.1| stage III sporulation protein J [Bacillus cereus 03BB108] gi|196027215|gb|EDX65835.1| stage III sporulation protein J [Bacillus cereus NVH0597-99] gi|218536479|gb|ACK88877.1| stage III sporulation protein J [Bacillus cereus AH820] gi|227003597|gb|ACP13340.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684] gi|228595783|gb|EEK53467.1| Membrane protein oxaA 1 [Bacillus cereus BGSC 6E1] gi|228658490|gb|EEL14156.1| Membrane protein oxaA 1 [Bacillus cereus 95/8201] gi|228822975|gb|EEM68816.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829211|gb|EEM74848.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841578|gb|EEM86694.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266313|gb|ACQ47950.1| stage III sporulation protein J [Bacillus anthracis str. A0248] Length = 255 Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats. Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF--DLGQADPYYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 GQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLIK 241 >gi|311032253|ref|ZP_07710343.1| OxaA-like protein precursor [Bacillus sp. m3-13] Length = 260 Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats. Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 27/226 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ L++YF L+ N +G++I++ T+ ++ PL KQ + M+ +QP++ Sbjct: 36 WNEYVVYPLSWLITYFAELMNNDYGLSIIIVTLLIRFAILPLMIKQTKNAKAMQALQPEM 95 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 LREK+ Q LQ+ + L++ H +NPLAGC+P+L+Q+P+ + I+ + E+ Sbjct: 96 KALREKYSSKDQKTQQKLQQETMGLFQKHGVNPLAGCFPLLVQMPILIGFFHAITRTTEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 A DL DP I P++ ++ FIQ K+ D Sbjct: 156 --ANHNFMWFDLGDPDPYFIL-------------------PVVAGITTFIQQKIMMAGMD 194 Query: 514 --KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M+L MP++ V +FPA L +YW N+ IVQ I Sbjct: 195 NNPQMVMMLWIMPIMIVVFAINFPAALSLYWVVGNIFMIVQTYFIK 240 >gi|212640679|ref|YP_002317199.1| OxaA-like protein precursor [Anoxybacillus flavithermus WK1] gi|212562159|gb|ACJ35214.1| Stage III sporulation protein J, essential for sigma-G activity [Anoxybacillus flavithermus WK1] Length = 255 Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats. Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L++Y L G N+G+ I++ T+ ++L PL +Q ++ M+ +QP++ Sbjct: 35 WNEYIVYPLSWLITYMSELFGSNYGLGIIVVTILIRLAILPLMIQQTRNSKAMQALQPEL 94 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ + L++ H +NPLAGC P+ +Q+P+ Y I + E+ Sbjct: 95 QKLREKYSSKDAQTQQKLQQETMLLFQKHGVNPLAGCLPLFIQMPILIGFYHAIMRTEEI 154 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL DP I P++ ++ FIQ KM Sbjct: 155 ARHNFLWF--DLGEKDPFYIL-------------------PLVAGVTTFIQQKMMMAGTE 193 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ V +FPA L +YW N+ I Q I Sbjct: 194 QQNPQMAMMLWLMPIMVVVFAINFPAALSLYWVVGNLFMIAQTYFIK 240 >gi|295400330|ref|ZP_06810309.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus thermoglucosidasius C56-YS93] gi|312111144|ref|YP_003989460.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y4.1MC1] gi|294977605|gb|EFG53204.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus thermoglucosidasius C56-YS93] gi|311216245|gb|ADP74849.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y4.1MC1] Length = 251 Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats. Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ PM L+ + GN +G+AI++ T+ V+ PL KQ+ +T M+ ++P++ Sbjct: 32 WDHYFVYPMSKLLLTLGHFFGNNYGVAIIVLTLIVRFCLLPLMIKQFKTTIAMQKLRPEL 91 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+K + + LQ+ M+QLY+ H +NP +GC P+L+Q P+F A+Y I + E+ Sbjct: 92 QKLQEKYKGTDLEAQRKLQQEMMQLYQKHGVNPASGCLPVLIQTPIFMALYYAILRTQEI 151 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-- 511 + L DP I PI+ SL+ FI +++SP Sbjct: 152 KLHS--FLWVQLGHRDPYFIL-------------------PILASLTTFISLRLSPSMTE 190 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 AM+ MP++ SS P+ L +YW SI+Q ++ Sbjct: 191 EQMPQMAMMSYIMPIMIFIGASSVPSALSLYWVVGGCFSIIQSLILR 237 >gi|295402125|ref|ZP_06812084.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus thermoglucosidasius C56-YS93] gi|312112754|ref|YP_003991070.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y4.1MC1] gi|294975808|gb|EFG51427.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus thermoglucosidasius C56-YS93] gi|311217855|gb|ADP76459.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y4.1MC1] Length = 256 Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats. Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L+ Y + G ++G++I++ T+F++LL PL +Q + M+ +QP+I Sbjct: 37 WNEYIVYPLSWLIKYVAGVFGGSYGLSIIVVTIFIRLLILPLMIQQTKNAKAMQALQPEI 96 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+ Y I + E+ Sbjct: 97 QKLREKYSSKDMQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPILIGFYHAIMRTKEI 156 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 A DL DP I PI+ ++ FIQ K+ Sbjct: 157 --AEHNFLWFDLGEKDPFYIL-------------------PIVAGITTFIQQKIVMADTG 195 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + M+L MP++ V +FPA L +YW N+ SI Q I Sbjct: 196 QQNPQMVMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIAQTYFIK 242 >gi|225867467|ref|YP_002752845.1| stage III sporulation protein J [Bacillus cereus 03BB102] gi|225786803|gb|ACO27020.1| stage III sporulation protein J [Bacillus cereus 03BB102] Length = 255 Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats. Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF--DLGQADPYYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 GQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLIK 241 >gi|313621678|gb|EFR92461.1| stage III sporulation protein J [Listeria innocua FSL S4-378] Length = 287 Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 22/244 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++++F +L G N+ + I++ T+ ++LL PL KQ S M ++QPKI Sbjct: 42 WSHYIVFPLSWVITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKI 101 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L DP I + L +L + M + Sbjct: 162 KTDSFLWM--QLGNPDPYYILPIVAALTTFLSSKI----------------SMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 574 FSKN 577 + Sbjct: 264 LEEE 267 >gi|254391432|ref|ZP_05006634.1| membrane protein oxaA [Streptomyces clavuligerus ATCC 27064] gi|197705121|gb|EDY50933.1| membrane protein oxaA [Streptomyces clavuligerus ATCC 27064] Length = 415 Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats. Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 33/250 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI + ++ F+ L G +G++I+ V +++ PL KQ S NM Sbjct: 8 FSFITTLVSWIIVQFHKLYGAMFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSMRNM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S Sbjct: 68 QALQPKMKAIQERYKND-RQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYYVLSN 126 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-------------YLPGFMHVGIWPII 496 + L +A +IF F + + ++ Sbjct: 127 IASGKTVGVINESL-LESARQAHIFGAPLAAKFMDSEAKVASLDASLTTVRIVTAVMIVL 185 Query: 497 MSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 MS S F + P + Q M++ PV+F +FP G+++YW +NV Sbjct: 186 MSASQFYTQRQLMQKNVDLSVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNV 245 Query: 548 ISIVQQAVIM 557 ++ QQ ++ Sbjct: 246 WTMGQQMYVI 255 >gi|218232510|ref|YP_002370261.1| OxaA-like protein precursor [Bacillus cereus B4264] gi|228924231|ref|ZP_04087502.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228961750|ref|ZP_04123353.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229051155|ref|ZP_04194699.1| Membrane protein oxaA 1 [Bacillus cereus AH676] gi|229112899|ref|ZP_04242430.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-15] gi|229148036|ref|ZP_04276375.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST24] gi|229153645|ref|ZP_04281821.1| Membrane protein oxaA 1 [Bacillus cereus m1550] gi|296505914|ref|YP_003667614.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171] gi|218160467|gb|ACK60459.1| stage III sporulation protein J [Bacillus cereus B4264] gi|228629831|gb|EEK86484.1| Membrane protein oxaA 1 [Bacillus cereus m1550] gi|228635461|gb|EEK91952.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST24] gi|228670578|gb|EEL25891.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-15] gi|228722218|gb|EEL73619.1| Membrane protein oxaA 1 [Bacillus cereus AH676] gi|228797944|gb|EEM44954.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228835449|gb|EEM80819.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296326966|gb|ADH09894.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171] Length = 258 Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFNSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFIQMPILFAFYHAIMRTAEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 + F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 KQHSFLWF--DLGHADPFYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q I Sbjct: 195 GQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYFIK 241 >gi|239826978|ref|YP_002949602.1| hypothetical protein GWCH70_1536 [Geobacillus sp. WCH70] gi|239807271|gb|ACS24336.1| 60 kDa inner membrane insertion protein [Geobacillus sp. WCH70] Length = 252 Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats. Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ PM L+ +L G N+GIAI++ T+ V+ PL KQY +T M+ ++P++ Sbjct: 32 WDHYFVYPMSKLLLMLGHLFGDNYGIAIIVLTLIVRFCLLPLILKQYKTTIAMQKLRPEL 91 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+K + + LQK M+QLY+ H I+P +GC P+ +Q+P+F A+Y IS + E+ Sbjct: 92 QKLQEKYKGNDIETQRKLQKEMMQLYQKHGIHPASGCLPVFIQMPIFMALYYAISRTQEI 151 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 + L DP I PI+ SL+ FI +++SP Sbjct: 152 KLHS--FLWVQLGHRDPYFIL-------------------PILASLATFISVRLSPSMTE 190 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 AM+ MP++ +S P+ L +YW SI+Q ++ Sbjct: 191 QQMPQMAMMSYIMPIMIFIGANSVPSALSLYWVVGGCFSIIQSLILR 237 >gi|229094597|ref|ZP_04225664.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-42] gi|228688844|gb|EEL42675.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-42] Length = 246 Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats. Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 147 SKHTFLWF--DLGQADPYYIL-------------------PVVAAITTFIQQKLAMAGTA 185 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 186 GQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLIK 232 >gi|261420019|ref|YP_003253701.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC61] gi|297530020|ref|YP_003671295.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. C56-T3] gi|319766834|ref|YP_004132335.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC52] gi|261376476|gb|ACX79219.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC61] gi|297253272|gb|ADI26718.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. C56-T3] gi|317111700|gb|ADU94192.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC52] Length = 249 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 69/232 (29%), Positives = 118/232 (50%), Gaps = 28/232 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ PM L+ + G N+GIAI++ T+ V+ PL KQ+ ++ M+ ++P++ Sbjct: 32 WNHYFVYPMSKLLLTLGHWFGDNYGIAIIVLTLIVRFCLLPLILKQFRASLAMQKLRPEL 91 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+K P+ LQ+ M+QLY+ H +NP +GC P+L+Q+P+F A+Y IS + E+ Sbjct: 92 LKLQEKYKSKDPETQRKLQQEMMQLYQKHGVNPASGCLPVLIQMPIFMALYYAISRTQEI 151 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-- 511 + +L DP I P++ +L+ FI +++SP Sbjct: 152 KTHS--FLWVELGHRDPYFIL-------------------PVLAALTTFISLRLSPSMAE 190 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 AM+ MPV+ SS P+ L +YW SI+Q ++ A Sbjct: 191 EQMPQMAMMSYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLILRSQLKA 242 >gi|55980412|ref|YP_143709.1| hypothetical protein TTHA0443 [Thermus thermophilus HB8] gi|55771825|dbj|BAD70266.1| putative membrane protein [Thermus thermophilus HB8] Length = 430 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 75/252 (29%), Positives = 127/252 (50%), Gaps = 28/252 (11%) Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 ++ G E H E L+ P WG ++ + +M Y GN+G+AI+ Sbjct: 200 RVYGGQNEL-VRFHVEGLLSFPGLFSPNLWG---QLSLGLLWIMEAAYRFTGNWGLAILF 255 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 T+ V+LL +PL +Q+ S A ++ +QP I ++ EK+K P + +A ++LY+ H +NP Sbjct: 256 LTLVVRLLLWPLMHQQFKSMAEIQRLQPLIQKINEKYKDDPNKRA-EATMKLYQEHRVNP 314 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 AGC P+L+Q+P+ F ++KVI+ + WI DLA DP I + + +L Sbjct: 315 AAGCLPLLIQMPILFILWKVIANYEF---GQGFLWIPDLALPDPYYILPVLYVASTFLST 371 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 ++ ++ S+F M ++FVF + FP+G+ +YW S Sbjct: 372 WLSAHGNRDLIRQSLF--------------------MNLIFVFLVLQFPSGVTLYWVLST 411 Query: 547 VISIVQQAVIMK 558 +I +VQQ +I K Sbjct: 412 LIGLVQQWLINK 423 >gi|46198383|ref|YP_004050.1| hypothetical protein TTC0075 [Thermus thermophilus HB27] gi|46196005|gb|AAS80423.1| probable membrane protein [Thermus thermophilus HB27] Length = 430 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 28/252 (11%) Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 ++ G E H E L+ P WG ++ + +M Y GN+G+AI+ Sbjct: 200 RVYGGQNEL-VRFHVEGLLSFPGLFSPNLWG---QLSLGLLWIMEAAYRFTGNWGLAILF 255 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 T+ V+LL +PL +Q+ S A ++ +QP I ++ EK+K P + +A ++LY+ H +NP Sbjct: 256 LTLVVRLLLWPLMHQQFKSMAEIQRLQPLIQKINEKYKDDPNKRA-EATMKLYQEHRVNP 314 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 AGC P+L+Q+P+ F ++KVI+ + + WI DLA DP I + + +L Sbjct: 315 AAGCLPLLIQMPILFILWKVIANYEFGQG---FLWIPDLALPDPYYILPVLYVASTFLST 371 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 ++ ++ S+F M ++FVF + FP+G+ +YW S Sbjct: 372 WLSAHGNRDLIRQSLF--------------------MNLIFVFLVLQFPSGVTLYWVLST 411 Query: 547 VISIVQQAVIMK 558 +I +VQQ +I K Sbjct: 412 LIGLVQQWLINK 423 >gi|226530665|ref|NP_001150593.1| inner membrane protein ALBINO3 [Zea mays] gi|195640414|gb|ACG39675.1| inner membrane protein ALBINO3 [Zea mays] Length = 449 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 78/272 (28%), Positives = 135/272 (49%), Gaps = 28/272 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ + +++ + + ++G AI+L T+ VK PL KKQ ST M+ Sbjct: 101 GWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVESTLAMQ 160 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QP+I +++++ + + +Q +LYK +NPLAGC+P L IPV+ +Y+ +S Sbjct: 161 NLQPQIKAIQQRYAGN-QERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 219 Query: 451 L-EMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPIIMS 498 E + WI L + I LF G P + + P+++ Sbjct: 220 ANEGLLTEGFFWIPSLGGPTTIAARQSGSGITWLFPFVDGHPPLGWHDTICYLVLPVLLV 279 Query: 499 LSMFIQMKMSPPPA-----DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 S ++ M++ PP K +IL ++P + + S P+GL IYW +NV+S QQ Sbjct: 280 ASQYVSMEIMKPPQSDDPSQKNTMLILKFLPFMIGWFSLSVPSGLSIYWFTNNVLSTAQQ 339 Query: 554 AVIMKMHGAEIGLID----RLRSTFSKNYNSQ 581 + KM GA+ + + + + +K N+Q Sbjct: 340 VWLRKMGGAKPVVTEGGSGIITAGRAKRSNAQ 371 >gi|229035144|ref|ZP_04189090.1| Membrane protein oxaA 1 [Bacillus cereus AH1271] gi|228728210|gb|EEL79240.1| Membrane protein oxaA 1 [Bacillus cereus AH1271] Length = 255 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTAEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF--DLGQADPYYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 GQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIAQMYLIK 241 >gi|258517431|ref|YP_003193653.1| 60 kDa inner membrane insertion protein [Desulfotomaculum acetoxidans DSM 771] gi|257781136|gb|ACV65030.1| 60 kDa inner membrane insertion protein [Desulfotomaculum acetoxidans DSM 771] Length = 223 Score = 199 bits (505), Expect = 2e-48, Method: Composition-based stats. Identities = 75/230 (32%), Positives = 123/230 (53%), Gaps = 26/230 (11%) Query: 336 WGWFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 G F + M ++ Y L + N+G+AI+L TV +K+L +PL KKQ +S +M+ Sbjct: 1 MGIFNSLVAGMSDFINMLYKLTDSIGIPNYGLAIILLTVIIKMLLYPLTKKQMLSMRSMQ 60 Query: 391 NIQPKIDELREKFKQ-SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +QPKI EL+ K+K Q++Q+ ++LYK HNINP+AGC P+L+Q+P+ A+Y+ + Sbjct: 61 QLQPKIKELQNKYKGKDQQQIMQQKTMELYKEHNINPMAGCLPLLIQMPILIALYRALYN 120 Query: 450 SLEMRHAP-FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + A + W+ +L+ DP I PI+ S ++Q K++ Sbjct: 121 FKYLNTAHANFLWVPNLSNVDPWVIL-------------------PILAGASTYLQSKLT 161 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +D Q ++L MP+ + PAGL +YW N++ +QQ I K Sbjct: 162 TTTSDPTQQIMLYTMPLFIGYISYKMPAGLALYWVVFNLVGAIQQYYINK 211 >gi|229176162|ref|ZP_04303654.1| Membrane protein oxaA 1 [Bacillus cereus MM3] gi|228607321|gb|EEK64651.1| Membrane protein oxaA 1 [Bacillus cereus MM3] Length = 246 Score = 199 bits (505), Expect = 2e-48, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTAEI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 147 SKHTFLWF--DLGQADPYYIL-------------------PVVAAITTFIQQKLAMAGTA 185 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 186 GQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIAQMYLIK 232 >gi|30023510|ref|NP_835141.1| OxaA-like protein precursor [Bacillus cereus ATCC 14579] gi|229130732|ref|ZP_04259685.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-Cer4] gi|38502939|sp|Q814F4|OXAA1_BACCR RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|29899071|gb|AAP12342.1| 60 kDa inner membrane protein YIDC [Bacillus cereus ATCC 14579] gi|228652749|gb|EEL08634.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-Cer4] Length = 258 Score = 199 bits (505), Expect = 2e-48, Method: Composition-based stats. Identities = 74/227 (32%), Positives = 121/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +L N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTAEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 + F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 KQHSFLWF--DLGHADPFYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q I Sbjct: 195 GQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYFIK 241 >gi|194702082|gb|ACF85125.1| unknown [Zea mays] Length = 455 Score = 199 bits (505), Expect = 2e-48, Method: Composition-based stats. Identities = 78/272 (28%), Positives = 135/272 (49%), Gaps = 28/272 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ + +++ + + ++G AI+L T+ VK PL KKQ ST M+ Sbjct: 105 GWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVESTLAMQ 164 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QP+I +++++ + + +Q +LYK +NPLAGC+P L IPV+ +Y+ +S Sbjct: 165 NLQPQIKAIQQRYAGN-QERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 223 Query: 451 L-EMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPIIMS 498 E + WI L + I LF G P + + P+++ Sbjct: 224 ANEGLLTEGFFWIPSLGGPTTIAARQSGSGITWLFPFVDGHPPLGWHDTICYLVLPVLLV 283 Query: 499 LSMFIQMKMSPPPA-----DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 S ++ M++ PP K +IL ++P + + S P+GL IYW +NV+S QQ Sbjct: 284 ASQYVSMEIMKPPQSDDPSQKNTMLILKFLPFMIGWFSLSVPSGLSIYWFTNNVLSTAQQ 343 Query: 554 AVIMKMHGAEIGLID----RLRSTFSKNYNSQ 581 + KM GA+ + + + + +K N+Q Sbjct: 344 VWLRKMGGAKPVVTEGGSGIITAGRAKRSNAQ 375 >gi|229015403|ref|ZP_04172409.1| Membrane protein oxaA 1 [Bacillus cereus AH1273] gi|229026927|ref|ZP_04183250.1| Membrane protein oxaA 1 [Bacillus cereus AH1272] gi|228734385|gb|EEL85056.1| Membrane protein oxaA 1 [Bacillus cereus AH1272] gi|228745882|gb|EEL95878.1| Membrane protein oxaA 1 [Bacillus cereus AH1273] Length = 255 Score = 198 bits (504), Expect = 2e-48, Method: Composition-based stats. Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I PI+ +++ FIQ K++ Sbjct: 156 SKHTFLWF--DLGQADPYYIL-------------------PIVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 GQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIAQMYLIK 241 >gi|228955736|ref|ZP_04117731.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229072951|ref|ZP_04206147.1| Membrane protein oxaA 1 [Bacillus cereus F65185] gi|229181732|ref|ZP_04309055.1| Membrane protein oxaA 1 [Bacillus cereus 172560W] gi|229193737|ref|ZP_04320678.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 10876] gi|228589762|gb|EEK47640.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 10876] gi|228601765|gb|EEK59263.1| Membrane protein oxaA 1 [Bacillus cereus 172560W] gi|228710197|gb|EEL62175.1| Membrane protein oxaA 1 [Bacillus cereus F65185] gi|228803964|gb|EEM50588.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 255 Score = 198 bits (504), Expect = 2e-48, Method: Composition-based stats. Identities = 74/227 (32%), Positives = 121/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +L N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFIQMPILFAFYHAIMRTAEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 + F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 KQHSFLWF--DLGHADPFYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q I Sbjct: 195 GQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYFIK 241 >gi|228988715|ref|ZP_04148800.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771027|gb|EEM19508.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 255 Score = 198 bits (504), Expect = 2e-48, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF--DLGQADPYYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 GQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLIK 241 >gi|255016877|ref|ZP_05289003.1| SpoIIIJ protein [Listeria monocytogenes FSL F2-515] Length = 297 Score = 198 bits (504), Expect = 2e-48, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 22/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L DP I + L +L + M + Sbjct: 162 KTDSFLWM--QLGNPDPYYILPVVAALTTFLSSKI----------------SMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 574 FSK 576 ++ Sbjct: 264 VAE 266 >gi|301056960|ref|YP_003795171.1| stage III sporulation protein J [Bacillus anthracis CI] gi|300379129|gb|ADK08033.1| stage III sporulation protein J [Bacillus cereus biovar anthracis str. CI] Length = 255 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 76/227 (33%), Positives = 121/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P + +++ FIQ K++ Sbjct: 156 SKHTFLWF--DLGQADPYYIL-------------------PAVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 GQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLIK 241 >gi|16802044|ref|NP_472312.1| hypothetical protein lin2986 [Listeria innocua Clip11262] gi|38503122|sp|Q926Q5|OXAA1_LISIN RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|16415526|emb|CAC98211.1| lin2986 [Listeria innocua Clip11262] Length = 287 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 22/244 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++++F +L G N+ + I++ T+ ++LL PL KQ S M ++QPKI Sbjct: 42 WSHYIVFPLSWVITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKI 101 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L DP I + L +L + M + Sbjct: 162 KTDTFLWM--QLGNPDPYYILPIVAALTTFLSSKI----------------SMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 574 FSKN 577 + Sbjct: 264 LEEE 267 >gi|229164437|ref|ZP_04292365.1| Membrane protein oxaA 1 [Bacillus cereus R309803] gi|228619042|gb|EEK75940.1| Membrane protein oxaA 1 [Bacillus cereus R309803] Length = 246 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +L GN +G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFADLFGNNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I PI+ +++ FIQ K++ Sbjct: 147 SKHTFLWF--DLGQADPYYIL-------------------PIVAAITTFIQQKLAMAGTA 185 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 186 GQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIAQMYLIK 232 >gi|47568685|ref|ZP_00239382.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus G9241] gi|47554673|gb|EAL13027.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus G9241] Length = 246 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 147 SKHTFLWF--DLGQADPYYIL-------------------PVVAAITTFIQQKLAMAGTA 185 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 186 GQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLIK 232 >gi|229199690|ref|ZP_04326333.1| Membrane protein oxaA 1 [Bacillus cereus m1293] gi|228583785|gb|EEK41960.1| Membrane protein oxaA 1 [Bacillus cereus m1293] Length = 255 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF--DLGQADPFYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 GQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLIK 241 >gi|206975771|ref|ZP_03236682.1| stage III sporulation protein J [Bacillus cereus H3081.97] gi|217962978|ref|YP_002341556.1| OxaA-like protein precursor [Bacillus cereus AH187] gi|229159046|ref|ZP_04287102.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 4342] gi|206745865|gb|EDZ57261.1| stage III sporulation protein J [Bacillus cereus H3081.97] gi|217067037|gb|ACJ81287.1| stage III sporulation protein J [Bacillus cereus AH187] gi|228624465|gb|EEK81236.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 4342] gi|324329437|gb|ADY24697.1| OxaA-like protein precursor [Bacillus thuringiensis serovar finitimus YBT-020] Length = 255 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF--DLGQADPLYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 GQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLIK 241 >gi|218187535|gb|EEC69962.1| hypothetical protein OsI_00422 [Oryza sativa Indica Group] Length = 459 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 74/252 (29%), Positives = 129/252 (51%), Gaps = 26/252 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ + +++ + + ++G AI+L TV VK PL K+Q ST M+ Sbjct: 108 GWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQ 167 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QP+I +++++ + + +Q +LYK +NPLAGC+P L IPV+ +Y+ +S Sbjct: 168 NLQPQIKAIQQRYAGN-QERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 226 Query: 451 L-EMRHAPFWGWIKDLAAADPT----NIFTLFGILPFYLPGFMHVGI--------WPIIM 497 E + WI L + + +LPF + G +G P+++ Sbjct: 227 ANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLLPF-VDGHPPLGWHDTICYLVLPVLL 285 Query: 498 SLSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 S F+ M++ PP D Q ++L ++P + + S P+GL IYW +N++S Q Sbjct: 286 VASQFVSMEIMKPPQTDDPSQKNTLLVLKFLPFMIGWFSLSVPSGLSIYWFTNNILSTAQ 345 Query: 553 QAVIMKMHGAEI 564 Q + K+ GA+ Sbjct: 346 QVWLRKLGGAKP 357 >gi|313625809|gb|EFR95423.1| stage III sporulation protein J [Listeria innocua FSL J1-023] Length = 287 Score = 198 bits (503), Expect = 3e-48, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 22/244 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++++F +L G N+ + I++ T+ ++LL PL KQ S M ++QPKI Sbjct: 42 WSHYIVFPLSWVITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKI 101 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L DP I + L +L + M + Sbjct: 162 KTDTFLWM--QLGNPDPYFILPVVAALTTFLSSKI----------------SMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 574 FSKN 577 + Sbjct: 264 LEEE 267 >gi|229142235|ref|ZP_04270759.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST26] gi|228641253|gb|EEK97560.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST26] Length = 246 Score = 197 bits (502), Expect = 3e-48, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 147 SKHTFLWF--DLGQADPLYIL-------------------PVVAAITTFIQQKLAMAGTA 185 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 186 GQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLIK 232 >gi|332971199|gb|EGK10162.1| stage III sporulation protein J [Desmospora sp. 8437] Length = 261 Score = 197 bits (502), Expect = 3e-48, Method: Composition-based stats. Identities = 66/228 (28%), Positives = 119/228 (52%), Gaps = 22/228 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W + P+ L+ +F +++G++G+AI+ T+ ++L+ PL KQ S+ M+ +QP++ Sbjct: 56 WEKYFVFPLQQLLDFFNDVLGSWGLAILAATILIRLVVLPLTLKQMKSSRAMQVLQPEMK 115 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+EK+K + Q LQ+ ++L++ HN+NPLAGC P+L+Q+P+ A Y+ I + + Sbjct: 116 KLQEKYKNN-QQKLQEETMKLFQKHNVNPLAGCLPMLIQLPILIAFYQAIMREPTIAKSS 174 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F L DP I P++ +L+ ++Q + + Q Sbjct: 175 FLWM--QLGEQDPYYIL-------------------PLLAALTTYLQSVVMGMGDNPQQR 213 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 L MPV+ FPA L +YW +SN+ ++VQ I + A+ Sbjct: 214 AFLFIMPVMIFVLAFQFPAALPLYWIYSNLFTMVQYYFIGDKYKAKKS 261 >gi|222098963|ref|YP_002533021.1| oxaa-like protein precursor [Bacillus cereus Q1] gi|221243022|gb|ACM15732.1| stage III sporulation protein J [Bacillus cereus Q1] Length = 246 Score = 197 bits (502), Expect = 3e-48, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 147 SKHTFLWF--DLGQADPFYIL-------------------PVVAAITTFIQQKLAMAGTA 185 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 186 GQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLIK 232 >gi|311897303|dbj|BAJ29711.1| putative OxaA family protein [Kitasatospora setae KM-6054] Length = 397 Score = 197 bits (502), Expect = 3e-48, Method: Composition-based stats. Identities = 61/245 (24%), Positives = 117/245 (47%), Gaps = 24/245 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVST 386 +G+ + + ++ F++L + +G++I++ V +++ PL KQ +T Sbjct: 3 FGFLSPLYTAVSWIIVQFHSLFSHVFDPDGGLAWGLSIVMMVVVIRICLIPLFVKQIKAT 62 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ IQPK+ ++E++K Q + M++LYK NP + C PIL+Q P F A+Y V Sbjct: 63 RAMQAIQPKMKAIQERYKNDK-QRQSEEMMKLYKEAGTNPFSSCLPILVQAPFFTALYGV 121 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV----GIWPIIMSLSMF 502 ++ + L +A +IF F + + + ++MSLS F Sbjct: 122 LASIANDKTIGVIDQ-PLLESAKQAHIFGAPLSAKFVGAETVQIQIVCAVMIVLMSLSQF 180 Query: 503 IQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + + P + Q M++ P++F +FP G+++YW +NV S+ QQ Sbjct: 181 VTQRQLMTKNVDLSVKTPFMQQQKMLMYVFPIMFAVMGINFPVGVLVYWLTTNVWSMAQQ 240 Query: 554 AVIMK 558 V+++ Sbjct: 241 LVVIR 245 >gi|167745103|pdb|3BS6|A Chain A, 1.8 Angstrom Crystal Structure Of The Periplasmic Domain Of The Membrane Insertase Yidc gi|167745104|pdb|3BS6|B Chain B, 1.8 Angstrom Crystal Structure Of The Periplasmic Domain Of The Membrane Insertase Yidc Length = 280 Score = 197 bits (501), Expect = 5e-48, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 96/286 (33%), Gaps = 28/286 (9%) Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD 125 + +K L +IN +G + L Y +++S P L ++ + Y A+ Sbjct: 1 GQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSG 58 Query: 126 YVSTANNIELPNS--------NTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE- 176 N + L G+ + + +A F +T L Sbjct: 59 LTGRDGPDNPANGPRPLYNVEKDAYVLAEGQ---NELQVPXTYTDAAGNTFTKTFVLKRG 115 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLGDKSL 229 Y + V N + S G++ + T ++ F + G D+ Sbjct: 116 DYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKY 175 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + K+ I + N W+ +Y+A+ +IP + + + F + G+ + Sbjct: 176 EKYKFDTIADNENLNISSKGGWVAXLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGY 233 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + + + PG++ + L+ G + P ++ +D Sbjct: 234 KSQPVLVQPGQTGAXNSTLWVGPEIQDKXAAV-----APHLDLTVD 274 >gi|300118812|ref|ZP_07056532.1| OxaA-like protein precursor [Bacillus cereus SJ1] gi|298723780|gb|EFI64502.1| OxaA-like protein precursor [Bacillus cereus SJ1] Length = 255 Score = 197 bits (500), Expect = 6e-48, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFNSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF--DLGQADPYYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 GQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLIK 241 >gi|116874193|ref|YP_850974.1| SpoJ protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116743071|emb|CAK22195.1| SpoJ protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 287 Score = 197 bits (500), Expect = 6e-48, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 22/244 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ L+++F +L G N+ + I++ T+ ++LL PL KQ S M ++QPKI Sbjct: 42 WSHYIVFPLSWLITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKI 101 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQVKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L DP I + L +L + M + Sbjct: 162 KTDTFLWM--QLGNPDPYYILPIVAALTTFLSSKI----------------SMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K AMI+ MPV+ +F + P+ L +YW NV ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNVFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 574 FSKN 577 + Sbjct: 264 LEEE 267 >gi|229087976|ref|ZP_04220081.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-44] gi|228695333|gb|EEL48213.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-44] Length = 246 Score = 196 bits (499), Expect = 6e-48, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF L G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFAKLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTEEI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I PI+ +++ FIQ K++ Sbjct: 147 SKHTFLWF--DLGQADPYYIL-------------------PIVAAITTFIQQKLAMAGTA 185 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 186 GQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYMIK 232 >gi|229106081|ref|ZP_04236693.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-28] gi|228677336|gb|EEL31601.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-28] Length = 246 Score = 196 bits (499), Expect = 7e-48, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 120/227 (52%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFATWLGDNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 147 SKHTFLWF--DLGQADPYYIL-------------------PVVAAITTFIQQKLAMAGTA 185 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q I Sbjct: 186 GQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYFIK 232 >gi|297746102|emb|CBI16158.3| unnamed protein product [Vitis vinifera] Length = 451 Score = 196 bits (499), Expect = 7e-48, Method: Composition-based stats. Identities = 77/252 (30%), Positives = 132/252 (52%), Gaps = 26/252 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ M +++ + + +G AI+L TV VK+ +PL KKQ ST M+ Sbjct: 97 GWFGFISEGMEVVLKVLEDGLTAVHVPYAYGFAIILLTVIVKIATYPLTKKQVESTLAMQ 156 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QPKI ++E++K + + +Q +LYK +NPLAGC+P L IPV+ +Y+ +S Sbjct: 157 NLQPKIKAIQERYKGN-QERIQLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 215 Query: 451 L-EMRHAPFWGWIKDLAAADPT----NIFTLFGILPFYLPGFMHVGI--------WPIIM 497 E + WI L + + ++PF + G +G P+++ Sbjct: 216 ANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLIPF-VDGHPPLGWQDTAAYLVLPVLL 274 Query: 498 SLSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +S ++ M++ PP D Q ++ ++P++ + S P+GL IYW +NV+S Q Sbjct: 275 VISQYVSMELMKPPQTDDPSQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQ 334 Query: 553 QAVIMKMHGAEI 564 Q + K+ GA+ Sbjct: 335 QVWLRKLGGAKP 346 >gi|326943284|gb|AEA19180.1| OxaA-like protein precursor [Bacillus thuringiensis serovar chinensis CT-43] Length = 255 Score = 196 bits (499), Expect = 8e-48, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 120/227 (52%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFATWLGDNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF--DLGQADPYYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q I Sbjct: 195 GQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYFIK 241 >gi|218296522|ref|ZP_03497250.1| 60 kDa inner membrane insertion protein [Thermus aquaticus Y51MC23] gi|218243064|gb|EED09596.1| 60 kDa inner membrane insertion protein [Thermus aquaticus Y51MC23] Length = 430 Score = 196 bits (498), Expect = 8e-48, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 132/266 (49%), Gaps = 32/266 (12%) Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 E+ + PG+ + ++ G E H E LA+P WG ++ + LM Sbjct: 190 EVRLPPGREV----KVYGGQNEL-VRFHVEGLLALPGLFTPNLWG---QLSLGLLWLMEM 241 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + G++G+AI+ T+ V+LL +PL +Q+ S A M+ +QP I ++ EK+K P + Sbjct: 242 AFRYTGSWGLAILFLTLVVRLLLWPLMHQQFKSMAEMQRLQPLIQKINEKYKDDPNKRA- 300 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 +A ++LY+ H +NP AGC P+ +Q+P+ F ++KVI+ + WI DLA DP Sbjct: 301 EATMKLYQEHKVNPAAGCLPLFIQMPILFILWKVIANYEFGQG---LLWIPDLALPDPYY 357 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I + + L ++ I+ +FI ++FVF + Sbjct: 358 ILPVLYVASTLLSTWLSAHGNKDIIRQGLFIN--------------------LIFVFLVL 397 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAG+ +YW SN+I + QQ +I K Sbjct: 398 QFPAGVTLYWVLSNLIGLFQQWLINK 423 >gi|254384778|ref|ZP_05000115.1| inner membrane protein [Streptomyces sp. Mg1] gi|194343660|gb|EDX24626.1| inner membrane protein [Streptomyces sp. Mg1] Length = 367 Score = 196 bits (498), Expect = 8e-48, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 38/278 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 G F FI P+ ++ F+++ G +G++I+ + +++ PL KQ +T Sbjct: 6 GLFSFITTPVSWVIVQFHSVYGAIFGADSGWAWGLSIVSLVILIRICLIPLFVKQIKATR 65 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+ Sbjct: 66 GMQALQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVL 124 Query: 448 SISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFY-------------LPGFMHVGI 492 S + + G I L +A +IF F + + Sbjct: 125 S---AIANGQTIGVINQSLLESARQAHIFGAPLAAKFTDSAEKAASLNASITDVRIVTAV 181 Query: 493 WPIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 ++MSLS F + P + Q M++ PV+F +FP G+++YW Sbjct: 182 MIVLMSLSQFYTQRQLMQKNVDLSVKTPFMQQQKMLMYIFPVIFAVMGINFPVGVLVYWL 241 Query: 544 WSNVISIVQQ-AVIMKMHGAEIGLIDRLRSTFSKNYNS 580 +NV ++ QQ VI + D+ + K+ +S Sbjct: 242 TTNVWTMGQQMYVINQNPTPGSKAQDQYLTRLLKHVSS 279 >gi|228942635|ref|ZP_04105167.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975565|ref|ZP_04136117.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982201|ref|ZP_04142490.1| Membrane protein oxaA 1 [Bacillus thuringiensis Bt407] gi|228777553|gb|EEM25831.1| Membrane protein oxaA 1 [Bacillus thuringiensis Bt407] gi|228784175|gb|EEM32202.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817061|gb|EEM63154.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 246 Score = 196 bits (498), Expect = 9e-48, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 120/227 (52%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFATWLGDNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 147 SKHTFLWF--DLGQADPYYIL-------------------PVVAAITTFIQQKLAMAGTA 185 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q I Sbjct: 186 GQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYFIK 232 >gi|169832372|ref|YP_001718354.1| 60 kDa inner membrane insertion protein [Candidatus Desulforudis audaxviator MP104C] gi|169639216|gb|ACA60722.1| 60 kDa inner membrane insertion protein [Candidatus Desulforudis audaxviator MP104C] Length = 300 Score = 196 bits (498), Expect = 9e-48, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 124/244 (50%), Gaps = 18/244 (7%) Query: 339 FYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F + M L+++ Y++ + ++GIAI+L T+ +K+ PL + Q S A M +Q Sbjct: 2 FEALIDGMTALINWLYHITVGVGLPSYGIAIVLLTILIKIFLHPLTRIQMRSMAKMSQLQ 61 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P+I +++++ + Q +Q +++LYK +NP+AGC +L+Q+P A+Y+ + + Sbjct: 62 PEIKAIQDRYGKDKQQ-MQTKIMELYKERKVNPMAGCLLLLVQLPFMIALYQALWNFDYV 120 Query: 454 RHAPF-WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 A + W+ DL DP I + + ++ L+M + P Sbjct: 121 NPAHAGFLWVADLKKTDPLYILPVLAAVTTFVQF-----------KLTMSVSKGGGNPSQ 169 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 ++ Q ++L MP+ ++ PAGL +YW N++SIVQQ I K A+ +++ R Sbjct: 170 EQMQKVMLTVMPLFIGGISATLPAGLSVYWVTFNLVSIVQQFFINKQILADQSAMEQQRE 229 Query: 573 TFSK 576 ++ Sbjct: 230 KAAR 233 >gi|229099913|ref|ZP_04230836.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-29] gi|229118976|ref|ZP_04248321.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-3] gi|228664501|gb|EEL19997.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-3] gi|228683528|gb|EEL37483.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-29] Length = 255 Score = 196 bits (498), Expect = 1e-47, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 119/227 (52%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF L G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFAELFGKNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK Q+ Q LQ+ M+QLY+ + INPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKHSSKDQATQQKLQQEMMQLYQKNGINPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF--DLGQADPYYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q I Sbjct: 195 GQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYFIK 241 >gi|221633069|ref|YP_002522294.1| inner membrane protein oxaA [Thermomicrobium roseum DSM 5159] gi|221155473|gb|ACM04600.1| inner membrane protein oxaA [Thermomicrobium roseum DSM 5159] Length = 312 Score = 196 bits (498), Expect = 1e-47, Method: Composition-based stats. Identities = 78/231 (33%), Positives = 116/231 (50%), Gaps = 31/231 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + ++ + G+ G+AI+L T+ +K L PL K ST M+ +QPKI Sbjct: 3 IWDQFVYAIEWGLARTAEVTGSAGLAIILFTILIKTLLLPLTIKSVRSTKAMQELQPKIR 62 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEMR 454 EL++K+ Q Q L M++LY+ H INP++GC P+LLQIPVFF +Y I S Sbjct: 63 ELQKKYGQD-RQRLSAEMMKLYQEHGINPMSGCLPMLLQIPVFFGLYFAIRNLSLSQVGA 121 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---- 510 A + WI DLA DP +I PI+ L FIQ +M+ P Sbjct: 122 WAHGFLWIPDLAKPDPLHIL-------------------PILAGLFQFIQTRMTRPAGVR 162 Query: 511 ----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P + ++ +MP++ V +F AG ++YW S V S+VQQ +I Sbjct: 163 RFEDPQQQMMYSMMLFMPLMVVLFGWNFAAGPVLYWVVSAVYSVVQQWLIT 213 >gi|320449653|ref|YP_004201749.1| 60 kDa inner membrane insertion protein [Thermus scotoductus SA-01] gi|320149822|gb|ADW21200.1| 60 kDa inner membrane insertion protein [Thermus scotoductus SA-01] Length = 431 Score = 195 bits (497), Expect = 1e-47, Method: Composition-based stats. Identities = 77/269 (28%), Positives = 135/269 (50%), Gaps = 32/269 (11%) Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 +T+ PG+++ ++ G E H E L++P WG ++ + L Sbjct: 188 KEATLTLTPGETL----KVYGGQNEL-VRFHVEGLLSLPGLFSPNIWG---QLSLGLLWL 239 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M + G++G+AI+ T+ V+LL +PL +Q+ S A M+ +QP I ++ EK+K P + Sbjct: 240 MEVAFRHTGSWGLAILFLTLVVRLLLWPLMHQQFKSMAEMQRLQPLIQKINEKYKDDPNK 299 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 +A ++LY+ H +NP AGC P+ +Q+P+ F ++KVI+ + WI DLA D Sbjct: 300 RA-EATMKLYQEHKVNPAAGCLPLFIQMPILFILWKVIANYEFGQG---LLWIPDLALPD 355 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I + +L ++ ++ S+F M ++F+F Sbjct: 356 PFYILPALYVASTFLSTWLSAHGNKDLIRQSLF--------------------MNLIFIF 395 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FP+G+ +YW SN+I +VQQ +I K Sbjct: 396 LVLQFPSGVTLYWVLSNLIGLVQQWLINK 424 >gi|323703944|ref|ZP_08115574.1| membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum nigrificans DSM 574] gi|323531102|gb|EGB21011.1| membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum nigrificans DSM 574] Length = 229 Score = 195 bits (497), Expect = 1e-47, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 123/229 (53%), Gaps = 26/229 (11%) Query: 336 WGWFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +GWF +I M LM+ Y V ++ +AI++ TV +K+ +PL+KKQ S M+ Sbjct: 2 FGWFDYIKTGMTDLMNLLYGFTVQIGVPSYALAIIILTVIIKMALYPLSKKQMRSMVMMQ 61 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P+I ++++K+K PQ +Q+ +++LYK +N+NP+AGC P+L+Q+P+ A+Y+ + Sbjct: 62 KLAPEIKQIQDKYKGKDPQKMQQMIMELYKENNVNPMAGCLPLLIQMPILIALYRALYAF 121 Query: 451 LEMRHAP-FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 A + W++ L+ G +P I+ + + ++Q +++ Sbjct: 122 PFKNPAHAHFLWVESLSKT---------GDIPL-----------AILAAATTYLQSRLTT 161 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D+ Q +L MP+ + + PAGL +YW N++ +QQ I K Sbjct: 162 NTQDQTQRTMLYMMPLFIGWIAYTVPAGLALYWVVFNIVGTIQQWFINK 210 >gi|255659825|ref|ZP_05405234.1| stage III sporulation protein J [Mitsuokella multacida DSM 20544] gi|260847900|gb|EEX67907.1| stage III sporulation protein J [Mitsuokella multacida DSM 20544] Length = 222 Score = 195 bits (497), Expect = 1e-47, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 125/240 (52%), Gaps = 30/240 (12%) Query: 336 WGWFYFIAKPMFMLMSY----FYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 G+F I +P+ L+ YN+ +G++G+AI+L T+ +K++ +PL KQ S Sbjct: 1 MGFFGTIFEPIENLLHVVLQALYNVTDAAGIGSYGVAIILLTILIKMMLYPLTVKQVKSM 60 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ + PK+ +++EK+K +P QV+Q+ + LYK +NPLAGC P+L+Q+P+ +Y Sbjct: 61 KAMQELSPKMKKIQEKYKDNP-QVMQQKVGALYKEAGVNPLAGCLPLLIQMPILMGMYYA 119 Query: 447 ISIS-LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + W+ +++ DP I P++ +L+ F+Q Sbjct: 120 LYNFTYPTPESAAFLWLPNMSDPDPYYIL-------------------PVLSALTTFLQQ 160 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 K + ++ +++ MP+ + +FP+GL++YW N++ I QQ + + + Sbjct: 161 KQTTTEMNQQMKIMMTVMPLFIGWISLNFPSGLVLYWVTMNIVQITQQWWMYRHDDKKKE 220 >gi|196249190|ref|ZP_03147889.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16] gi|196211419|gb|EDY06179.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16] Length = 249 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 72/232 (31%), Positives = 120/232 (51%), Gaps = 28/232 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ PM L+ F + G N+GIAI++ T+ V+ PL KQ+ ++ M+ ++P++ Sbjct: 32 WNHYFVYPMSKLLLTFGHWFGDNYGIAIIVLTLIVRFCLLPLILKQFRTSIAMQKLRPEL 91 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+K P+ LQ+ M+QLY+ H INP +GC P+L+Q+P+F A+Y IS + E+ Sbjct: 92 LKLQEKYKSKDPETQRKLQQEMVQLYQKHGINPASGCLPVLIQMPIFMALYYAISRTQEI 151 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-- 511 + F +L DP I PI+ +L+ F+ +++SP Sbjct: 152 KTHSFLWV--ELGHRDPYFIL-------------------PILAALTTFLSLRLSPSMTE 190 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 AM+ MPV+ SS P+ L +YW SI+Q ++ A Sbjct: 191 EQMPQMAMMSYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLMLRSQLKA 242 >gi|326510231|dbj|BAJ87332.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326514202|dbj|BAJ92251.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326520860|dbj|BAJ92793.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 449 Score = 195 bits (496), Expect = 2e-47, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 24/255 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M +++ + + +G AI+L T+ VK PL K+Q ST M+ Sbjct: 98 GWFGFISDAMEVVLKILKDGLSAVHVPYAYGFAIILLTIVVKAATLPLTKQQVESTMAMQ 157 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QP++ ++ ++ + + +Q +LYK +NPLAGC P L IPV+ +Y+ +S Sbjct: 158 NLQPQLKAIQARYAGN-QERIQLETARLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNV 216 Query: 451 L-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGI--------WPIIMS 498 E + WI L + + P G +G P+++ Sbjct: 217 ANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPIGWHDTICYLVLPVLLV 276 Query: 499 LSMFIQMKMSPPPA-----DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 S F+ M++ PP K +IL ++P + + S P+GL IYW +NV+S QQ Sbjct: 277 ASQFVSMEIMKPPQSTDPSQKNTQLILKFLPFMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 336 Query: 554 AVIMKMHGAEIGLID 568 + K+ GA+ + + Sbjct: 337 IWLRKLGGAKPAVNE 351 >gi|115434560|ref|NP_001042038.1| Os01g0151200 [Oryza sativa Japonica Group] gi|54290223|dbj|BAD61111.1| putative PPF-1 protein [Oryza sativa Japonica Group] gi|113531569|dbj|BAF03952.1| Os01g0151200 [Oryza sativa Japonica Group] Length = 459 Score = 195 bits (496), Expect = 2e-47, Method: Composition-based stats. Identities = 74/252 (29%), Positives = 129/252 (51%), Gaps = 26/252 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ + +++ + + ++G AI+L TV VK PL K+Q ST M+ Sbjct: 108 GWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQ 167 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QP+I +++++ + + +Q +LYK +NPLAGC+P L IPV+ +Y+ +S Sbjct: 168 NLQPQIKAIQQRYAGN-QERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 226 Query: 451 L-EMRHAPFWGWIKDLAAADPT----NIFTLFGILPFYLPGFMHVGI--------WPIIM 497 E + WI L + + +LPF + G +G P+++ Sbjct: 227 ANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLLPF-VDGHPPLGWHDTICYLVLPVLL 285 Query: 498 SLSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 S F+ M++ PP D Q ++L ++P + + S P+GL IYW +N++S Q Sbjct: 286 VASQFVSMEIMKPPQTDDPSQKNTLLVLKFLPFMIGWFSLSVPSGLSIYWFTNNILSTAQ 345 Query: 553 QAVIMKMHGAEI 564 Q + K+ GA+ Sbjct: 346 QVWLRKLGGAKP 357 >gi|138895363|ref|YP_001125816.1| stage III sporulation protein J [Geobacillus thermodenitrificans NG80-2] gi|134266876|gb|ABO67071.1| Stage III sporulation protein J [Geobacillus thermodenitrificans NG80-2] Length = 249 Score = 195 bits (496), Expect = 2e-47, Method: Composition-based stats. Identities = 72/232 (31%), Positives = 120/232 (51%), Gaps = 28/232 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ PM L+ F + GN +GIAI++ T+ V+ PL KQ+ ++ M+ ++P++ Sbjct: 32 WNHYFVYPMSKLLLTFGHWFGNNYGIAIIVLTLIVRFCLLPLILKQFRTSIAMQKLRPEL 91 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+K P+ LQ+ M+QLY+ H INP +GC P+L+Q+P+F A+Y IS + E+ Sbjct: 92 LKLQEKYKSKDPETQRKLQQEMVQLYQKHGINPASGCLPVLIQMPIFMALYYAISRTQEI 151 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-- 511 + F +L DP I PI+ +L+ F+ +++SP Sbjct: 152 KTHSFLWV--ELGHRDPYFIL-------------------PILAALTTFLSLRLSPSMTE 190 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 AM+ MPV+ SS P+ L +YW SI+Q ++ A Sbjct: 191 EQMPQMAMMSYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLMLRSQLKA 242 >gi|269836199|ref|YP_003318427.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus DSM 20745] gi|269785462|gb|ACZ37605.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus DSM 20745] Length = 332 Score = 195 bits (496), Expect = 2e-47, Method: Composition-based stats. Identities = 65/219 (29%), Positives = 113/219 (51%), Gaps = 31/219 (14%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + Y + G+ G+++++ T+ +K L PL K ST+ M+ IQPK+ EL++K+ + Q Sbjct: 15 LGYIADYTGSAGLSVIIFTILIKTLLLPLTVKAVRSTSAMQEIQPKLKELQKKYGKD-RQ 73 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF---WGWIKDLA 466 L + ++LY+ H INP AGC P+LLQ+P+ F +Y+ I + + + W+ LA Sbjct: 74 RLSQETMKLYQEHGINPAAGCLPMLLQLPILFGLYEAIRSLSQAGTGTWGEGFMWLPSLA 133 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--------PADKGQAM 518 + DP I P++ L +Q KM+ P P + Sbjct: 134 STDPHYIL-------------------PVMAGLFQLVQTKMTRPAGQGKITDPQQRMMNT 174 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ +MP++ V FP+GL++YW+ S + S++QQ I Sbjct: 175 MMTFMPLMVVAFGVKFPSGLVLYWTVSALYSVIQQWFIT 213 >gi|313679788|ref|YP_004057527.1| membrane protein insertase, yidc/oxa1 family [Oceanithermus profundus DSM 14977] gi|313152503|gb|ADR36354.1| membrane protein insertase, YidC/Oxa1 family [Oceanithermus profundus DSM 14977] Length = 461 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 84/305 (27%), Positives = 146/305 (47%), Gaps = 33/305 (10%) Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFS---ANEITILPGKSITTTNFLFAGAKEFPT 317 + + +T + + ++ G + + + + TT ++ G E Sbjct: 179 TALYAAVQTKANKGYAFVLRGKDPLETQLEVGGGGATVQVALPAGTTELSVYGGLNELVR 238 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 ++ E +P WG ++ + +M Y N+G+AI+L TVFV+LL +P Sbjct: 239 LY-VEGFYELPGLFKPNIWG---QLSLGLLYVMELAYKYTTNWGLAILLLTVFVRLLLWP 294 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 L +Q+ S A M I+P +DE+ +K+K P + +A++ LY+ H INP AGC P+ +Q+ Sbjct: 295 LMHQQFKSMAEMNKIKPLMDEINKKYKDDPEKK-NEALMNLYREHKINPAAGCLPMFIQM 353 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 P+ F +++VI+ + + WI DL+ DP + P + Sbjct: 354 PILFMMWRVIANYEFDQG---FLWIPDLSLPDPFYVL-------------------PALY 391 Query: 498 SLSMFIQ-MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 L M Q M MS D + I+ M ++F+F + FPAG+ +YW +S +I +VQQ +I Sbjct: 392 VLVMLAQTMLMSHGNKDAMRQGIM--MNLIFIFLVLKFPAGVTLYWVFSTLIGLVQQWMI 449 Query: 557 MKMHG 561 K G Sbjct: 450 NKQLG 454 >gi|47093230|ref|ZP_00231003.1| spoJ protein [Listeria monocytogenes str. 4b H7858] gi|47018424|gb|EAL09184.1| spoJ protein [Listeria monocytogenes str. 4b H7858] Length = 267 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 22/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 22 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 81 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 82 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 141 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L DP I + L +L + M + Sbjct: 142 KTDSFLWM--QLGNPDPYYILPVVAALTTFLSSKI----------------SMMGQTQQN 183 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 184 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 243 Query: 574 FSK 576 ++ Sbjct: 244 VAE 246 >gi|16804891|ref|NP_466376.1| hypothetical protein lmo2854 [Listeria monocytogenes EGD-e] gi|46909042|ref|YP_015431.1| SpoJ protein [Listeria monocytogenes serotype 4b str. F2365] gi|47097239|ref|ZP_00234801.1| spoJ protein [Listeria monocytogenes str. 1/2a F6854] gi|224498310|ref|ZP_03666659.1| SpoJ protein [Listeria monocytogenes Finland 1988] gi|224503080|ref|ZP_03671387.1| SpoJ protein [Listeria monocytogenes FSL R2-561] gi|226225403|ref|YP_002759510.1| SpoIIIJ protein [Listeria monocytogenes Clip81459] gi|254824783|ref|ZP_05229784.1| spoJ protein [Listeria monocytogenes FSL J1-194] gi|254827421|ref|ZP_05232108.1| spoJ protein [Listeria monocytogenes FSL N3-165] gi|254830711|ref|ZP_05235366.1| SpoIIIJ protein [Listeria monocytogenes 10403S] gi|254851844|ref|ZP_05241192.1| spoJ protein [Listeria monocytogenes FSL R2-503] gi|254899689|ref|ZP_05259613.1| SpoIIIJ protein [Listeria monocytogenes J0161] gi|254913108|ref|ZP_05263120.1| spoJ protein [Listeria monocytogenes J2818] gi|254930872|ref|ZP_05264231.1| spoJ protein [Listeria monocytogenes HPB2262] gi|254937489|ref|ZP_05269186.1| OxaA-like protein [Listeria monocytogenes F6900] gi|255520073|ref|ZP_05387310.1| SpoIIIJ protein [Listeria monocytogenes FSL J1-175] gi|284800259|ref|YP_003412124.1| hypothetical protein LM5578_0004 [Listeria monocytogenes 08-5578] gi|284993444|ref|YP_003415212.1| hypothetical protein LM5923_0004 [Listeria monocytogenes 08-5923] gi|300763388|ref|ZP_07073386.1| spoJ protein [Listeria monocytogenes FSL N1-017] gi|38503109|sp|Q8Y3I2|OXAA1_LISMO RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|67461022|sp|Q71VQ8|OXAA1_LISMF RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|16412354|emb|CAD01067.1| lmo2854 [Listeria monocytogenes EGD-e] gi|46882315|gb|AAT05608.1| spoJ protein [Listeria monocytogenes serotype 4b str. F2365] gi|47014394|gb|EAL05365.1| spoJ protein [Listeria monocytogenes str. 1/2a F6854] gi|225877865|emb|CAS06580.1| Putative SpoIIIJ protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258599799|gb|EEW13124.1| spoJ protein [Listeria monocytogenes FSL N3-165] gi|258605137|gb|EEW17745.1| spoJ protein [Listeria monocytogenes FSL R2-503] gi|258610091|gb|EEW22699.1| OxaA-like protein [Listeria monocytogenes F6900] gi|284055821|gb|ADB66762.1| hypothetical protein LM5578_0004 [Listeria monocytogenes 08-5578] gi|284058911|gb|ADB69850.1| hypothetical protein LM5923_0004 [Listeria monocytogenes 08-5923] gi|293582417|gb|EFF94449.1| spoJ protein [Listeria monocytogenes HPB2262] gi|293591110|gb|EFF99444.1| spoJ protein [Listeria monocytogenes J2818] gi|293594022|gb|EFG01783.1| spoJ protein [Listeria monocytogenes FSL J1-194] gi|300515665|gb|EFK42714.1| spoJ protein [Listeria monocytogenes FSL N1-017] gi|328468319|gb|EGF39325.1| hypothetical protein LM1816_03412 [Listeria monocytogenes 1816] gi|332313283|gb|EGJ26378.1| Membrane protein oxaA 1 [Listeria monocytogenes str. Scott A] Length = 287 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 22/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L DP I + L +L + M + Sbjct: 162 KTDSFLWM--QLGNPDPYYILPVVAALTTFLSSKI----------------SMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 574 FSK 576 ++ Sbjct: 264 VAE 266 >gi|289436080|ref|YP_003465952.1| stage III sporulation protein J [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172324|emb|CBH28870.1| stage III sporulation protein J [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 287 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 116/244 (47%), Gaps = 22/244 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWVITWFSDLFGGSYAVGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L + DP I + L + + M + Sbjct: 162 KTDTFLWM--QLGSPDPYFILPIVAALTTFASSKI----------------SMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 574 FSKN 577 + Sbjct: 264 LEEE 267 >gi|313635501|gb|EFS01736.1| stage III sporulation protein J [Listeria seeligeri FSL N1-067] Length = 287 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 116/244 (47%), Gaps = 22/244 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++++F +L G ++ I I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWVITWFSDLFGGSYAIGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L + DP I + L + + M + Sbjct: 162 KTDTFLWM--QLGSPDPYFILPIVAALTTFASSKI----------------SMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 574 FSKN 577 + Sbjct: 264 LEEE 267 >gi|325284198|ref|YP_004256739.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus proteolyticus MRP] gi|324316007|gb|ADY27122.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus proteolyticus MRP] Length = 576 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 97/507 (19%), Positives = 181/507 (35%), Gaps = 69/507 (13%) Query: 75 NPSLIGSINLKGAQFDDLNLRGY------HLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 N KG + ++ Y + L + N + Sbjct: 103 TNLADIVFNNKG-EIIGWYVKNYAGSPYIKENADGTYDFTALQNERGIINLVNGPALQIQ 161 Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVT 187 N +S T ++ + +T+++ +YL + V Sbjct: 162 AENLDPKAPVTAQEPQLSNNGETNEQVAVFRYEQG-GVPVTKTVTIHTRNYLINVKTEVG 220 Query: 188 NNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE 247 + G P+ Q G +A + + + E Sbjct: 221 -GGTQNYQMLLPGLGNDGNPRV---RALPQVGEVATV--------------QGAGVTTVE 262 Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP-GKSITTTN 306 + + + +P + S + +G R A+ + +L G S ++ Sbjct: 263 NIRYAAM-QH------VPPNQMSPAILVR--PEGGTRVDAQMTGGSNALLTLGLSGNSSV 313 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 ++ G E + K + D WF I+ + LM + LVG++GI I+L Sbjct: 314 DVYGGRNELIHL----KQTGFYGMPGVFDPNWFGHISLAIVSLMELLHRLVGDWGIVILL 369 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTH 422 V ++L+ +P+ + Q +TA M+ +QPK+ E+++++K + + +Q M LYK H Sbjct: 370 IAVLLRLVMWPVMQAQARTTAKMQVLQPKMKEIQDRYKDAKDLESQRAMQMEMAALYKEH 429 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 N NP AGC L +PV A++ I + W+ DLA DP I Sbjct: 430 NFNP-AGCLSSFLPLPVLIALWSTIRNFEF---DSGFLWMPDLAIPDPLWILPAL----- 480 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 + I+ +++ + +P + +M + FV+ FPAG+ IY Sbjct: 481 ----------YLIVNMGQLWVSTRRTPEMFKQQA-----FMYLFFVYFALIFPAGVSIYL 525 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDR 569 S I I+QQ ++ K E+ + Sbjct: 526 IISTAIGILQQFIVNKQVEVELARSGQ 552 >gi|315286678|ref|ZP_07872171.1| stage III sporulation protein J [Listeria ivanovii FSL F6-596] gi|313630899|gb|EFR98590.1| stage III sporulation protein J [Listeria ivanovii FSL F6-596] Length = 287 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 116/243 (47%), Gaps = 22/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWVITWFSDLFGGSYAVGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L + DP I + L + + M + Sbjct: 162 KTDSFLWM--QLGSPDPYFILPIVAALTTFASSKI----------------SMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 574 FSK 576 + Sbjct: 264 LEE 266 >gi|296131544|ref|YP_003638794.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas flavigena DSM 20109] gi|296023359|gb|ADG76595.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas flavigena DSM 20109] Length = 384 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 140/289 (48%), Gaps = 43/289 (14%) Query: 334 IDW--GWFYFIAKPMFMLMSYFYNLVGN----------FGIAIMLTTVFVKLLFFPLAKK 381 +DW G + + + +M F+ L+ +G++I+ + +++L PL K Sbjct: 1 MDWMDGLLFPLMVVVAWIMVRFHELLTWAGLDATSGAAWGLSIVGLVIVMRILLIPLFFK 60 Query: 382 QYVSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 Q ++ M+ +QP++ L++K+K + + + + M++LY+ H NP A C PILLQ Sbjct: 61 QIKASRGMQLVQPEMQALQKKYKGKSDPASREAMSREMMELYRKHGTNPFASCLPILLQS 120 Query: 438 PVFFAIYKVISISLEMRHAPF------WGWIKDLAA-ADPTNIFTLFGILPFY-LPGFMH 489 P+FFA+++V+ + + ++LAA A+ I+ F G +H Sbjct: 121 PIFFALFRVLFELPRLAAGTYERADAIGPMTRELAAQAEAATIWGAPLSGTFLKADGNVH 180 Query: 490 VGIWPIIMSLSM---------FIQMKMSPP-----PADKGQAMILNWMPVVFVFALSSFP 535 + I +I+ ++M + MK PP P + Q ++L +P++F F+ +FP Sbjct: 181 IQIVTVILIIAMSVTTFTTQRQLTMKNMPPAALEGPMAQQQKILLYMLPLIFAFSGVNFP 240 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYN 579 G+++YW+ +N+ S+ QQ ++ AE L +R ++ Sbjct: 241 IGVLLYWTTTNLWSMGQQFYTIRRMPAPGSEAEKALKERQARKAARRGQ 289 >gi|254991919|ref|ZP_05274109.1| SpoIIIJ protein [Listeria monocytogenes FSL J2-064] Length = 287 Score = 194 bits (494), Expect = 3e-47, Method: Composition-based stats. Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 22/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++ +F L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVYPLSAVIKWFSELFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + + Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAAI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L DP I + L +L + M + Sbjct: 162 KGDTFLWM--QLGNPDPYYILPVVAALTTFLSSKI----------------SMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 574 FSK 576 ++ Sbjct: 264 VAE 266 >gi|226495803|ref|NP_001152272.1| LOC100285911 [Zea mays] gi|195654525|gb|ACG46730.1| inner membrane protein ALBINO3 [Zea mays] gi|223974117|gb|ACN31246.1| unknown [Zea mays] Length = 459 Score = 194 bits (494), Expect = 3e-47, Method: Composition-based stats. Identities = 74/272 (27%), Positives = 135/272 (49%), Gaps = 28/272 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ + +++ + + ++G AI+L T+ VK PL KKQ ST M+ Sbjct: 107 GWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVESTMAMQ 166 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QP++ +++++ + + +Q +LY+ +NPLAGC+P L IPV+ +Y+ +S Sbjct: 167 NLQPQLKAIQQRYAGN-QERIQLETARLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNV 225 Query: 451 L-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGIW--------PIIMS 498 E + WI L + + P G +G + P+++ Sbjct: 226 ANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWYDTICYLVLPVLLV 285 Query: 499 LSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 S ++ M++ PP D Q ++L ++P + + S P+GL IYW +NV+S QQ Sbjct: 286 ASQYVSMEIMKPPQSDDPSQKNTLLVLKFLPFMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 345 Query: 554 AVIMKMHGAEIGLID----RLRSTFSKNYNSQ 581 + KM GA+ + + + + +K N+Q Sbjct: 346 VWLRKMGGAKPVVSEGDRRIITAGRAKRSNAQ 377 >gi|255025588|ref|ZP_05297574.1| SpoIIIJ protein [Listeria monocytogenes FSL J2-003] Length = 283 Score = 194 bits (494), Expect = 3e-47, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 22/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L DP I + L +L + M + Sbjct: 162 KTDSFLWM--QLGNPDPYYILPVVAALTTFLSSKI----------------SMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 574 FSK 576 ++ Sbjct: 264 VAE 266 >gi|218900627|ref|YP_002449038.1| stage III sporulation protein J [Bacillus cereus G9842] gi|228911326|ref|ZP_04075130.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 200] gi|218544253|gb|ACK96647.1| stage III sporulation protein J [Bacillus cereus G9842] gi|228848344|gb|EEM93194.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 200] Length = 255 Score = 194 bits (494), Expect = 3e-47, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 119/227 (52%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +L N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + + Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-- 511 F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 SEHTFLWF--DLGQADPFYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q I Sbjct: 195 GQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYFIK 241 >gi|158321892|ref|YP_001514399.1| 60 kDa inner membrane insertion protein [Alkaliphilus oremlandii OhILAs] gi|158142091|gb|ABW20403.1| 60 kDa inner membrane insertion protein [Alkaliphilus oremlandii OhILAs] Length = 220 Score = 194 bits (494), Expect = 3e-47, Method: Composition-based stats. Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 14/219 (6%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +A+P L+ ++L N+G++I+L T+ KLL PL KQ S M+ IQPK+ +L+E Sbjct: 4 LARPFGALLKLIFDLTNNYGLSIILFTIVTKLLTLPLTIKQNKSMKEMQEIQPKLKKLQE 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K P Q L ++LYK HN++P GC P+L+Q P+ ++ + G Sbjct: 64 KYKNDPEQ-LNIKTMELYKEHNVSPFGGCLPLLIQFPIIIGLFAAVREP---------GT 113 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSPPPADKGQAMI 519 + A I T F LP + PI+ L+ ++ S AD+ Q ++ Sbjct: 114 YVFGSQAAYEAINTSFLWLPNLTVADPWI--LPILAGLTTYLSSATLTSGKSADQTQKIM 171 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MPV+ + +FPAGL +YW SNV +QQ ++ + Sbjct: 172 TYFMPVMIFWWGKTFPAGLTLYWFVSNVFQTIQQLILRR 210 >gi|206970374|ref|ZP_03231327.1| stage III sporulation protein J [Bacillus cereus AH1134] gi|206734951|gb|EDZ52120.1| stage III sporulation protein J [Bacillus cereus AH1134] Length = 255 Score = 194 bits (494), Expect = 3e-47, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 119/227 (52%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +L N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + + Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-- 511 F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 SEHTFLWF--DLGQADPFYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q I Sbjct: 195 GQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYFIK 241 >gi|148905860|gb|ABR16092.1| unknown [Picea sitchensis] Length = 471 Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats. Identities = 77/254 (30%), Positives = 121/254 (47%), Gaps = 24/254 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WF FIA + + + + +G AI+ TV VK+ FPL KKQ ST M+N Sbjct: 100 WFGFIADGLEGFLKVLKDGLTTVHVPYAYGFAIITLTVLVKIATFPLTKKQVESTLAMQN 159 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QPKI ++E++K + +Q +LYK +NPLAGC P L +PV+ +Y+ +S Sbjct: 160 LQPKIKAIQERYKGD-QERIQLETSRLYKQAGVNPLAGCLPTLATMPVWIGLYQALSNVA 218 Query: 452 -EMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPIIMSL 499 E + WI LA T I LF G P + P+++ Sbjct: 219 NEGLLTEGFFWIPSLAGPTTIAARQNGTGISWLFPFVDGQPPLGWSDTFAYLVLPVLLVG 278 Query: 500 SMFIQMKMSPPPA-----DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 S +I M++ P K + L ++P++ + S P+GL IYW +N +S QQ Sbjct: 279 SQYISMQIMQTPQANDPSQKNTQIALKFLPLMIGYFSLSVPSGLSIYWLTNNFLSTAQQL 338 Query: 555 VIMKMHGAEIGLID 568 + K+ GA+ + + Sbjct: 339 WLRKLGGAKPIVSE 352 >gi|149182294|ref|ZP_01860773.1| OxaA-like protein precursor [Bacillus sp. SG-1] gi|148849986|gb|EDL64157.1| OxaA-like protein precursor [Bacillus sp. SG-1] Length = 238 Score = 194 bits (493), Expect = 4e-47, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 121/251 (48%), Gaps = 35/251 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ +L+ G++G+ I++ T+ ++L PL KQ ++ M+ +QP++ Sbjct: 15 WNEYIVYPLSLLIIKVSEFFDGSYGLGIIIVTLIIRLAILPLMIKQTKNSKAMQALQPEM 74 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ + L++ H +NPLAGC+P+++Q+P+ Y I + E+ Sbjct: 75 QKLREKYSSKDAQTQQKLQQETMGLFQKHGVNPLAGCFPLIVQMPILIGFYHAIVRTEEI 134 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 ++ F + DL DP + P+I ++ FIQ KM Sbjct: 135 KNHTFLWF--DLGQPDPLYLL-------------------PLIAGVTTFIQQKMMMAGTA 173 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + AM+L MPV+ + +FPA L +YW N+ I+Q I G + Sbjct: 174 NQNPQMAMMLYIMPVMIIIFAINFPAALSLYWVVGNIFMIIQTYFIK-------GPDIKE 226 Query: 571 RSTFSKNYNSQ 581 + +KN ++ Sbjct: 227 QKELAKNGGAK 237 >gi|239980791|ref|ZP_04703315.1| putative inner membrane protein translocase component YidC [Streptomyces albus J1074] Length = 414 Score = 194 bits (493), Expect = 4e-47, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 117/267 (43%), Gaps = 36/267 (13%) Query: 350 MSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + F+ L G +G++I+ + +++ PL KQ +T M+ +QP++ +++ Sbjct: 2 IVQFHKLYGALFGDDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQ 61 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E++K Q + M++LYK NPLA C PILLQ P FFA+Y V++ + F Sbjct: 62 ERYKNDK-QRQSEEMMKLYKDAGTNPLASCLPILLQSPFFFALYHVLNSIASNKTIGFID 120 Query: 461 WI------------KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 LAA N + + + + ++MS S F + Sbjct: 121 EALLASAQKAHIVGAPLAAKFTDNADKIEALGSSTTNVHIVTAVMIVLMSASQFFTQRQL 180 Query: 509 PP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 P + Q M++ P++F +FP G+++YW +N+ ++ QQ +++ Sbjct: 181 MTKNVDTTVKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLVYWLTTNMWTMGQQMYVIRQ 240 Query: 560 H-----GAEIGLIDRLRSTFSKNYNSQ 581 + A+ ++R + N + Sbjct: 241 NPTPGSKAQAAFLERFLKRITMNPKVR 267 >gi|228905430|ref|ZP_04069385.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 4222] gi|228968638|ref|ZP_04129621.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar sotto str. T04001] gi|228791067|gb|EEM38685.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar sotto str. T04001] gi|228854250|gb|EEM98953.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 4222] Length = 246 Score = 194 bits (493), Expect = 4e-47, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 119/227 (52%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF +L N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + + Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-- 511 F + DL ADP I P++ +++ FIQ K++ Sbjct: 147 SEHTFLWF--DLGQADPFYIL-------------------PVVAAITTFIQQKLAMAGTA 185 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q I Sbjct: 186 GQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYFIK 232 >gi|148905926|gb|ABR16124.1| unknown [Picea sitchensis] Length = 471 Score = 194 bits (492), Expect = 4e-47, Method: Composition-based stats. Identities = 77/254 (30%), Positives = 121/254 (47%), Gaps = 24/254 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WF FIA + + + + +G AI+ TV VK+ FPL KKQ ST M+N Sbjct: 100 WFGFIADGLEGFLKVLKDGLTTVHVPYAYGFAIITLTVLVKIATFPLTKKQVESTLAMQN 159 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QPKI ++E++K + +Q +LYK +NPLAGC P L +PV+ +Y+ +S Sbjct: 160 LQPKIKAIQERYKGD-QERIQLETSRLYKQAGVNPLAGCLPTLATMPVWIGLYQALSNVA 218 Query: 452 -EMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPIIMSL 499 E + WI LA T I LF G P + P+++ Sbjct: 219 NEGLLTEGFFWIPSLAGPTTIAARQNGTGISWLFPFVDGQPPLGWSDTFAYLVLPVLLVG 278 Query: 500 SMFIQMKMSPPPA-----DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 S +I M++ P K + L ++P++ + S P+GL IYW +N +S QQ Sbjct: 279 SQYISMQIMQTPQANDPSQKNTQIALKFLPLMIGYFSLSVPSGLSIYWLTNNFLSTAQQL 338 Query: 555 VIMKMHGAEIGLID 568 + K+ GA+ + + Sbjct: 339 WLRKLGGAKPIVSE 352 >gi|313640128|gb|EFS04745.1| stage III sporulation protein J [Listeria seeligeri FSL S4-171] Length = 287 Score = 194 bits (492), Expect = 5e-47, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 116/244 (47%), Gaps = 22/244 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++++F +L G ++ I I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWVITWFSDLFGGSYAIGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKI 101 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L + DP I + L + + M + Sbjct: 162 KTDTFLWM--QLGSPDPYFILPIVAALTTFASSKI----------------SMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRXQEALAAAQ 263 Query: 574 FSKN 577 + Sbjct: 264 LEEE 267 >gi|172059050|ref|YP_001815510.1| 60 kDa inner membrane insertion protein [Exiguobacterium sibiricum 255-15] gi|171991571|gb|ACB62493.1| 60 kDa inner membrane insertion protein [Exiguobacterium sibiricum 255-15] Length = 284 Score = 194 bits (492), Expect = 5e-47, Method: Composition-based stats. Identities = 71/234 (30%), Positives = 114/234 (48%), Gaps = 27/234 (11%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ PM L+ + G++GI I++TT+ V+L+ PL KQ S M+ IQP++ Sbjct: 43 WKHYFVWPMAWLIREISHFFNGDYGIGIIVTTLLVRLVILPLMIKQTKSMGGMQVIQPEM 102 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ M++LY+ HN+NPLAGC PIL+Q+P+ A Y I + + Sbjct: 103 VKLREKYSSKDQETQQKLQQEMMKLYQEHNVNPLAGCLPILIQMPILIAFYNAIIYTPAI 162 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 F + DL DP I PI+ ++ ++Q K+S D Sbjct: 163 FQHTFLWF--DLGKPDPYFIL-------------------PILSAIFTYLQQKLSMAGQD 201 Query: 514 --KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 ++L P++ + P+ L +YW + SI+ IMK +I Sbjct: 202 DNPQMKIMLYVFPIMIFVMGVTLPSALSLYWVVGYIFSIIVTIAIMKPMREKIK 255 >gi|163943166|ref|YP_001648050.1| OxaA-like protein precursor [Bacillus weihenstephanensis KBAB4] gi|229136311|ref|ZP_04265058.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST196] gi|229170189|ref|ZP_04297875.1| Membrane protein oxaA 1 [Bacillus cereus AH621] gi|163865363|gb|ABY46422.1| 60 kDa inner membrane insertion protein [Bacillus weihenstephanensis KBAB4] gi|228613290|gb|EEK70429.1| Membrane protein oxaA 1 [Bacillus cereus AH621] gi|228647183|gb|EEL03271.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST196] Length = 255 Score = 194 bits (492), Expect = 5e-47, Method: Composition-based stats. Identities = 74/227 (32%), Positives = 120/227 (52%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF L G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFAELFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + + Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-- 511 F + DL ADP I PI+ +++ FIQ K++ Sbjct: 156 SEHTFLWF--DLGQADPFYIL-------------------PIVAAITTFIQQKLAMAGTA 194 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 GQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIAQMYMIK 241 >gi|229065145|ref|ZP_04200438.1| Membrane protein oxaA 1 [Bacillus cereus AH603] gi|228716174|gb|EEL67893.1| Membrane protein oxaA 1 [Bacillus cereus AH603] Length = 246 Score = 193 bits (491), Expect = 5e-47, Method: Composition-based stats. Identities = 74/227 (32%), Positives = 120/227 (52%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF L G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 27 WNEYFVYPLSQLITYFAELFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 86 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + + Sbjct: 87 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-- 511 F + DL ADP I PI+ +++ FIQ K++ Sbjct: 147 SEHTFLWF--DLGQADPFYIL-------------------PIVAAITTFIQQKLAMAGTA 185 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 186 GQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIAQMYMIK 232 >gi|302535577|ref|ZP_07287919.1| inner membrane protein [Streptomyces sp. C] gi|302444472|gb|EFL16288.1| inner membrane protein [Streptomyces sp. C] Length = 368 Score = 193 bits (491), Expect = 5e-47, Method: Composition-based stats. Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 36/275 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ F+ + G +G++I+ + +++ PL KQ +T M Sbjct: 8 FSFITTPVSWIIVQFHKVYGAIFGADSGWAWGLSIVSLVILIRICLIPLFVKQIKATRGM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-- 447 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+ Sbjct: 68 QALQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLAS 126 Query: 448 ------------SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 + R A +G LAA + + + + + + Sbjct: 127 IANGKTIGVINQPLLESARQAHIFG--APLAAKFMDSAEKVAALDASITNVRIVTAVMIV 184 Query: 496 IMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 +MSLS F + P + Q M++ PV+F +FP G+++YW +N Sbjct: 185 MMSLSQFYTQRQLMQKNVDLSVKTPFMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTN 244 Query: 547 VISIVQQ-AVIMKMHGAEIGLIDRLRSTFSKNYNS 580 V ++ QQ VI + D+ + K+ + Sbjct: 245 VWTMGQQMYVINQNPTPGSKAQDQYLTRLLKHVTT 279 >gi|229014652|ref|ZP_04171766.1| Membrane protein oxaA 1 [Bacillus mycoides DSM 2048] gi|228746663|gb|EEL96552.1| Membrane protein oxaA 1 [Bacillus mycoides DSM 2048] Length = 255 Score = 193 bits (491), Expect = 6e-47, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 120/227 (52%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF L G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFAELFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + + Sbjct: 96 VKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-- 511 F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 SEHTFLWF--DLGQADPFYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 GQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIAQMYMIK 241 >gi|217965938|ref|YP_002351616.1| membrane protein OxaA 1 [Listeria monocytogenes HCC23] gi|290892034|ref|ZP_06555031.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|217335208|gb|ACK41002.1| membrane protein OxaA 1 [Listeria monocytogenes HCC23] gi|290558628|gb|EFD92145.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|307572445|emb|CAR85624.1| membrane protein oxaA 1 precursor [Listeria monocytogenes L99] Length = 287 Score = 193 bits (491), Expect = 6e-47, Method: Composition-based stats. Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 22/230 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L DP I + L +L + M + Sbjct: 162 KTDSFLWM--QLGNPDPYYILPVVAALTTFLSSKI----------------SMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNK 253 >gi|313611878|gb|EFR86333.1| stage III sporulation protein J [Listeria monocytogenes FSL F2-208] Length = 277 Score = 193 bits (491), Expect = 6e-47, Method: Composition-based stats. Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 22/230 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 32 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 91 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 92 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 151 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L DP I + L +L + M + Sbjct: 152 KTDSFLWM--QLGNPDPYYILPVVAALTTFLSSKI----------------SMMGQTQQN 193 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + Sbjct: 194 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNK 243 >gi|224054791|ref|XP_002298365.1| inner membrane protein [Populus trichocarpa] gi|222845623|gb|EEE83170.1| inner membrane protein [Populus trichocarpa] Length = 451 Score = 193 bits (491), Expect = 7e-47, Method: Composition-based stats. Identities = 77/272 (28%), Positives = 135/272 (49%), Gaps = 28/272 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M ++ + + + +G AI+L T+ VK+ PL KKQ ST M+ Sbjct: 97 GWFGFISDGMEFVLKVLKDGLSSVHVPYAYGFAIILLTIAVKVATLPLTKKQVESTLAMQ 156 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QPKI +++++ + + +Q +LY+ +NPLAGC+P L IPV+ +Y+ +S Sbjct: 157 NLQPKIKAIQQRYAGN-QERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNV 215 Query: 451 L-EMRHAPFWGWIKDLAAADP-------TNIFTLFGILPFYLPGFMH----VGIWPIIMS 498 E + WI L + I LF + + P H + P+++ Sbjct: 216 ANEGVLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWHDTAAYLVLPVLLI 275 Query: 499 LSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 S ++ M++ PP D Q ++ ++P++ + S P+GL IYW +NV+S QQ Sbjct: 276 ASQYVSMEIMKPPQTDDPTQKNTLLVFKFLPIMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 335 Query: 554 AVIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581 + K+ GA+ + + + + +K SQ Sbjct: 336 VWLRKLGGAKPVVNENASGIITAGRAKRSASQ 367 >gi|269797065|ref|YP_003316520.1| preprotein translocase subunit YidC [Sanguibacter keddieii DSM 10542] gi|269099250|gb|ACZ23686.1| preprotein translocase subunit YidC [Sanguibacter keddieii DSM 10542] Length = 365 Score = 193 bits (490), Expect = 7e-47, Method: Composition-based stats. Identities = 64/267 (23%), Positives = 123/267 (46%), Gaps = 23/267 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W F+ +F+ + + ++I+ + ++ + PL KQ ++ M+ +QP++ Sbjct: 14 WIMFLCHKLFVFIGLPDGAGVAWILSIVGLVIVIRTIMIPLFFKQIRASRGMQMVQPELQ 73 Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +++K+K + + + + LYK H NP A C P+LLQ PVFFA+++V++ + Sbjct: 74 AIQKKYKNKKDPASREAMSRETMALYKKHGTNPFASCLPVLLQAPVFFALFRVLNSLRGI 133 Query: 454 RHAPFWGWIK-DLAAADPTNIFTLFGIL--------PFYLPGFMHVGIWPIIMSLSMFIQ 504 G D A A +LFG P L + G+ + M+ + F+ Sbjct: 134 ADGTKSGIGPIDQAVAQAAETSSLFGAPLSSTFLHEPTDLNTKIVAGVLIVSMAATQFLT 193 Query: 505 -----MKMSPP-----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 MK P P + Q ++L +PV+ + +FP G++IYW+ +N+ S+ QQ Sbjct: 194 QRQLTMKNMPKAALEGPMMQTQKIMLYMLPVIMAVSGVNFPVGVLIYWTTTNLWSMGQQF 253 Query: 555 VIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 ++ A +RL + ++ Sbjct: 254 YTIRKMPAPGSEAERLLNERKARKAAR 280 >gi|297158787|gb|ADI08499.1| putative inner membrane protein translocase component YidC [Streptomyces bingchenggensis BCW-1] Length = 387 Score = 193 bits (490), Expect = 8e-47, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 36/269 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 G Y + + + FY+L+ + +G++I+ V +++ PL KQ +T NM Sbjct: 5 LGPLYDVVSWIIVQFHAFYSLIFDRDSGWAWGLSIVSLVVLIRICLIPLFVKQIKATRNM 64 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P F ++Y+V++ Sbjct: 65 QALQPKMKAIQERYKSD-RQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFISLYQVLNH 123 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGIL----------------PFYLPGFMHVGIW 493 R F D + D +FG + + Sbjct: 124 IANNRTVGFI----DQSLLDSARSAHIFGAPLSVKFMSSASKVESLGASLTDVRVVTIVM 179 Query: 494 PIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 ++MS S F + P + Q M++ PV+F +FP G+++YW Sbjct: 180 IVLMSASQFFTQRQLMTKNVDLTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLT 239 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +NV ++ QQ +++ + + + R Sbjct: 240 TNVWTMGQQMFVIRRNPTPGSVAFKARQE 268 >gi|315273159|ref|ZP_07869206.1| stage III sporulation protein J [Listeria marthii FSL S4-120] gi|313616210|gb|EFR89288.1| stage III sporulation protein J [Listeria marthii FSL S4-120] Length = 287 Score = 193 bits (490), Expect = 8e-47, Method: Composition-based stats. Identities = 66/230 (28%), Positives = 114/230 (49%), Gaps = 22/230 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L DP I + L +L + M + Sbjct: 162 KTDSFLWM--QLGNPDPYYILPVVAALTTFLSSKI----------------SMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K AMI+ MPV+ +F + P+ L +YW NV ++ Q +I + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNVFTVFQTLLINNPFKNK 253 >gi|297826255|ref|XP_002881010.1| hypothetical protein ARALYDRAFT_901831 [Arabidopsis lyrata subsp. lyrata] gi|297326849|gb|EFH57269.1| hypothetical protein ARALYDRAFT_901831 [Arabidopsis lyrata subsp. lyrata] Length = 458 Score = 192 bits (489), Expect = 1e-46, Method: Composition-based stats. Identities = 72/256 (28%), Positives = 126/256 (49%), Gaps = 24/256 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M +++ + + +G AI+L T+ VK +PL K+Q ST M+ Sbjct: 107 GWFGFISDGMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQ 166 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QPKI +++++ + + +Q +LYK +NPLAGC P L IPV+ +Y+ +S Sbjct: 167 NLQPKIKAIQQRYAGN-QERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNV 225 Query: 451 L-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGIW--------PIIMS 498 E + WI L + + P G +G + P+++ Sbjct: 226 ANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLI 285 Query: 499 LSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 S ++ M++ PP D Q ++ ++P++ + S P+GL IYW +NV+S QQ Sbjct: 286 ASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWFTNNVLSTAQQ 345 Query: 554 AVIMKMHGAEIGLIDR 569 + K+ GA+ + + Sbjct: 346 VYLRKLGGAKPNMDEN 361 >gi|78043134|ref|YP_358876.1| sporulation associated-membrane protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995249|gb|ABB14148.1| sporulation associated-membrane protein [Carboxydothermus hydrogenoformans Z-2901] Length = 223 Score = 192 bits (489), Expect = 1e-46, Method: Composition-based stats. Identities = 63/225 (28%), Positives = 121/225 (53%), Gaps = 31/225 (13%) Query: 344 KPMFMLMSYFYN---------LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 +P+ +++ N + ++ +AI++ T+ +K++ +PL Q S M+ +QP Sbjct: 2 QPLIDAITWILNNLYLFTKSIGIPSYALAIIMLTILIKIILYPLNHAQMKSMKVMQELQP 61 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 K+ E+++K+K P Q Q+A+++LYK + +NP++GC P+L+Q+P+ A+Y+ + + Sbjct: 62 KMQEIQKKYKNDP-QKQQQALMELYKEYGVNPMSGCLPMLIQLPILIALYRALYNFKYLN 120 Query: 455 HAP-FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512 A + WI +++ DP I PI+ +L+ +IQ +M+ Sbjct: 121 PAHAKFFWIANISHKDPYFIL-------------------PILAALTTYIQSRMTMTSGN 161 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 D Q ++L MP++ + S PAGL IYW N++ I+QQ + Sbjct: 162 DPNQKVMLYVMPLMIGWIAMSLPAGLGIYWVVLNIMGIIQQYFVN 206 >gi|15226968|ref|NP_180446.1| ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] gi|38372238|sp|Q8LBP4|ALB3_ARATH RecName: Full=Inner membrane protein ALBINO3, chloroplastic; Flags: Precursor gi|2209332|gb|AAB61458.1| chloroplast membrane protein ALBINO3 [Arabidopsis thaliana] gi|3927828|gb|AAC79585.1| chloroplast membrane protein (ALBINO3) [Arabidopsis thaliana] gi|27311661|gb|AAO00796.1| chloroplast membrane protein (ALBINO3) [Arabidopsis thaliana] gi|30387561|gb|AAP31946.1| At2g28800 [Arabidopsis thaliana] gi|330253078|gb|AEC08172.1| inner membrane protein ALBINO3 [Arabidopsis thaliana] Length = 462 Score = 192 bits (489), Expect = 1e-46, Method: Composition-based stats. Identities = 72/256 (28%), Positives = 126/256 (49%), Gaps = 24/256 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M +++ + + +G AI+L T+ VK +PL K+Q ST M+ Sbjct: 111 GWFGFISDAMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQ 170 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QPKI +++++ + + +Q +LYK +NPLAGC P L IPV+ +Y+ +S Sbjct: 171 NLQPKIKAIQQRYAGN-QERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNV 229 Query: 451 L-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGIW--------PIIMS 498 E + WI L + + P G +G + P+++ Sbjct: 230 ANEGLFTEGFFWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLI 289 Query: 499 LSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 S ++ M++ PP D Q ++ ++P++ + S P+GL IYW +NV+S QQ Sbjct: 290 ASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWLTNNVLSTAQQ 349 Query: 554 AVIMKMHGAEIGLIDR 569 + K+ GA+ + + Sbjct: 350 VYLRKLGGAKPNMDEN 365 >gi|150389948|ref|YP_001319997.1| 60 kDa inner membrane insertion protein [Alkaliphilus metalliredigens QYMF] gi|149949810|gb|ABR48338.1| 60 kDa inner membrane insertion protein [Alkaliphilus metalliredigens QYMF] Length = 217 Score = 192 bits (487), Expect = 2e-46, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 115/230 (50%), Gaps = 23/230 (10%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ +P+ L+ ++++GN+GIAI++ TV VKL PL KQ S M+ IQP I EL+ Sbjct: 3 FLTQPLGALLKIIFDVIGNYGIAIIVFTVLVKLAMVPLTMKQTKSMKKMQEIQPMIKELQ 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA---- 456 E+ K Q + +++LYK +N++P GC P+L+Q P+ ++ V+ ++ Sbjct: 63 EQHKDDKEQ-MNIKVMELYKEYNVSPFGGCLPLLIQFPIIIGLFTVLREPMDYGFTLEVI 121 Query: 457 -PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + WI +LA ADP I L L YL I M + D Sbjct: 122 QAGFLWIPNLAEADP-WILPLLAGLTTYLSS----------------ISMAATGNKKDPT 164 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 Q ++ + P++ + SFPAGL +YW SN+ QQ VI K + + Sbjct: 165 QVIMKYFFPIMIFWWGRSFPAGLTLYWVISNLFQAGQQIVINKPYLKQRE 214 >gi|307330013|ref|ZP_07609165.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces violaceusniger Tu 4113] gi|306884389|gb|EFN15423.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces violaceusniger Tu 4113] Length = 379 Score = 192 bits (487), Expect = 2e-46, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 113/268 (42%), Gaps = 35/268 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + + ++ F++ +G++I+ V +++ PL KQ ST N Sbjct: 4 ILGPLYDVVSWIIVQFHSFYSLIFDRDSGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRN 63 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P F ++Y+V++ Sbjct: 64 MQALQPKMKAIQERYKSDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFISLYQVLN 122 Query: 449 ISLE--------------MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 R+A +G + D + G + Sbjct: 123 HIANNKTVGVIDQNLLDSARNAHIFGAPLSVKFMDSASKVESLGA--SLTDVRIVTITMI 180 Query: 495 IIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 I+MS S F + P + Q M++ PV+F +FP G+++YW + Sbjct: 181 ILMSASQFFTQRQLMTKNVDLTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTT 240 Query: 546 NVISIVQQAVIMKMHGAEIGLIDRLRST 573 NV ++ QQ +++ + + + R Sbjct: 241 NVWTLGQQMFVIRRNPTPGSIAFKARQE 268 >gi|38372402|sp|Q9FY06|PPF1_PEA RecName: Full=Inner membrane protein PPF-1, chloroplastic; AltName: Full=Post-floral-specific protein 1; Flags: Precursor gi|2231046|emb|CAA73179.1| PPF-1 protein [Pisum sativum] Length = 442 Score = 191 bits (486), Expect = 2e-46, Method: Composition-based stats. Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 24/256 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M ++ + + + +G AI+L TV VK PL K+Q ST M+ Sbjct: 89 GWFGFISDGMEFVLKVLKDGLSSVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQ 148 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QPKI ++E++ + + +Q +LY +NPLAGC P L IPV+ +Y+ +S Sbjct: 149 NLQPKIKAIQERYAGN-QERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNV 207 Query: 451 L-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGIW--------PIIMS 498 E + WI L + + P G +G + P+++ Sbjct: 208 ANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPLLGWYDTAAYLVLPVLLI 267 Query: 499 LSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +S ++ M++ PP D Q +I ++P++ + S P+GL IYW +NV+S QQ Sbjct: 268 VSQYVSMEIMKPPQTNDPNQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQ 327 Query: 554 AVIMKMHGAEIGLIDR 569 + K+ GA+ + + Sbjct: 328 VWLRKLGGAKPAVNEN 343 >gi|311070645|ref|YP_003975568.1| OxaA-like protein precursor [Bacillus atrophaeus 1942] gi|310871162|gb|ADP34637.1| OxaA-like protein precursor [Bacillus atrophaeus 1942] Length = 249 Score = 191 bits (486), Expect = 2e-46, Method: Composition-based stats. Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ +++Y L G N+G++I++ TV ++LL PL KQ S+ M+ +QP++ Sbjct: 26 WDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTVLIRLLILPLMIKQLRSSKAMQALQPEM 85 Query: 397 DELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ + Q+ + L+ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 86 QKLKEKYSSKDQKTQQQLQQETMALFSKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 145 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 F + DL DP I PI+ ++ F+Q K+ Sbjct: 146 SEHSFLWF--DLGEKDPYYIL-------------------PIVAGVATFVQQKLMMAGNA 184 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + SFPA L +YW N+ I Q +I Sbjct: 185 TQNPQMAMMLWIMPIMIIVFAISFPAALSLYWVVGNLFMIAQTFLIK 231 >gi|108805126|ref|YP_645063.1| 60 kDa inner membrane insertion protein [Rubrobacter xylanophilus DSM 9941] gi|108766369|gb|ABG05251.1| 60 kDa inner membrane insertion protein [Rubrobacter xylanophilus DSM 9941] Length = 246 Score = 191 bits (486), Expect = 3e-46, Method: Composition-based stats. Identities = 71/225 (31%), Positives = 113/225 (50%), Gaps = 26/225 (11%) Query: 342 IAKPMFMLM----SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 I P+F L+ F+ + +AI + TV V+ + FPL +Q S M+ ++P+ID Sbjct: 8 IFDPLFSLLGGMLFTFHGWGAPWWLAIAMLTVVVRAVLFPLTFRQVKSMRRMQELKPEID 67 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--ISLEMRH 455 E+R + K P Q Q+ M++LY NINPL GC P L+Q+P+F +Y I LE Sbjct: 68 EIRRRHKDDP-QRQQQEMMKLYGERNINPLGGCLPALVQLPIFLVLYYTIKEFEHLESFR 126 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 W DL A DP P++ L++ +++ + Sbjct: 127 TGGLLWFDDLTAYDPYFAL-------------------PVVYVLTLMAAQEITIRNTNPQ 167 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 Q ++ +PVVF L+ FPAGL +Y+ SN+IS++Q +I ++H Sbjct: 168 QRQLMRALPVVFGVVLARFPAGLFVYYITSNLISVLQNLLIYRLH 212 >gi|227902597|ref|ZP_04020402.1| stage III sporulation protein J [Lactobacillus acidophilus ATCC 4796] gi|227869686|gb|EEJ77107.1| stage III sporulation protein J [Lactobacillus acidophilus ATCC 4796] Length = 298 Score = 191 bits (485), Expect = 3e-46, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 22/247 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ T+ V+++ PL ST M++IQP+I Sbjct: 56 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIVRVILLPLNAISIRSTTKMQSIQPQI 115 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+++Q+PV +A+Y I + ++ Sbjct: 116 NELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVIIQLPVMYALYGAILRTPQL 175 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F DL+ DP I + ++ + LS +I +P + Sbjct: 176 QTGRFLWM--DLSKPDPYYIMPILAMVFTF---------------LSTYISQLSTPKSSQ 218 Query: 514 KGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G ++ M ++ +F + + +YW SN+ VQ ++ + + Sbjct: 219 NGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQAVQTFILQNPIKYRKEQEAKNEA 278 Query: 573 TFSKNYN 579 + Sbjct: 279 ERERKRK 285 >gi|260101881|ref|ZP_05752118.1| stage III sporulation protein J [Lactobacillus helveticus DSM 20075] gi|260084309|gb|EEW68429.1| stage III sporulation protein J [Lactobacillus helveticus DSM 20075] gi|328463993|gb|EGF35491.1| stage III sporulation protein [Lactobacillus helveticus MTCC 5463] Length = 298 Score = 191 bits (485), Expect = 3e-46, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 113/247 (45%), Gaps = 22/247 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ T+ ++++ PL ST M+ IQP+I Sbjct: 56 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIIRVILLPLNAISIRSTTKMQGIQPQI 115 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+L+Q+PV +A+Y I + ++ Sbjct: 116 NELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLPVMYALYGAILRTPQL 175 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F DL+ DP I + ++ + LS +I +P A Sbjct: 176 QTGRFLWM--DLSKPDPYYIMPILAMVFTF---------------LSTYISQLATPKSAQ 218 Query: 514 KGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G ++ M ++ +F + + +YW SN+ VQ ++ + + + Sbjct: 219 NGMTKVMTYGMAIIVGVMALNFQSAITLYWVISNLFQAVQTFILQNPIKFKKEQEAKAEA 278 Query: 573 TFSKNYN 579 + Sbjct: 279 ERERKRK 285 >gi|229007352|ref|ZP_04164950.1| Membrane protein oxaA 2 [Bacillus mycoides Rock1-4] gi|228753883|gb|EEM03323.1| Membrane protein oxaA 2 [Bacillus mycoides Rock1-4] Length = 260 Score = 191 bits (485), Expect = 3e-46, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 125/244 (51%), Gaps = 33/244 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ +++ + + V G+FGIAI++ T+ V+ PLA QY S MK +QP+ Sbjct: 37 WDHYFVYPISLMLQFVAHHVPGGSFGIAIIIITLLVRSAMIPLAVSQYRSQMKMKKMQPQ 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L+EK + QK M +L KT NPLAGC P+L+Q+P+F A+Y IS + Sbjct: 97 MQKLKEKHGDVSKDIEKQKQYQKEMSELMKTGGWNPLAGCLPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E+R + +L ADP +I PI+ +L+ FIQMK+ Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PILAALATFIQMKVMQS 195 Query: 511 PADKGQAMIL-----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 G+ + + MP + +F + P+GL++YW N+ +++Q V+ K+ E G Sbjct: 196 NVTPGEQVQMLKVQQFMMPAMILFMGFAAPSGLVLYWITGNIFTMLQTIVLRKVMDREEG 255 Query: 566 LIDR 569 + Sbjct: 256 KLQN 259 >gi|56965876|ref|YP_177610.1| stage III sporulation protein J [Bacillus clausii KSM-K16] gi|56912122|dbj|BAD66650.1| stage III sporulation protein J [Bacillus clausii KSM-K16] Length = 284 Score = 190 bits (484), Expect = 3e-46, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 24/246 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W F P+ L+ V ++G AI++ TV +++ PL KQ S M+ +QP++ Sbjct: 35 WNSFFVYPLSRLIILIAGWVSSYGWAIIVVTVLFRIVLLPLMVKQTKSMKAMQQLQPEMQ 94 Query: 398 ELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +LR+K+ ++ L M +L+ H +NP AGC P+L+Q+P+F AIY I + + Sbjct: 95 KLRQKYSAKDKNTQMQLNTEMQKLFSEHKVNPFAGCLPLLVQMPIFLAIYHAIMRTPNFQ 154 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F ++ L DP I P++ + FIQ KM + Sbjct: 155 GESFAWFV--LNNPDPYFIL-------------------PVLACILTFIQQKMMMVQDNP 193 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++L MP++ + PA +I+YW N+ I+Q I + + GL + + Sbjct: 194 QMKILLYAMPIMILVVGIFLPAAVILYWVVGNIFMIMQTYFITGPNAGKRGLEATVETAA 253 Query: 575 SKNYNS 580 + Sbjct: 254 ASKAKG 259 >gi|212639373|ref|YP_002315893.1| stage III sporulation protein J essential for sigma-G activity [Anoxybacillus flavithermus WK1] gi|212560853|gb|ACJ33908.1| Stage III sporulation protein J essential for sigma-G activity [Anoxybacillus flavithermus WK1] Length = 260 Score = 190 bits (484), Expect = 4e-46, Method: Composition-based stats. Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 32/239 (13%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ PM L+ + N+G+AI+ T+ V+ PL KQ+ + M+ I+P++ Sbjct: 42 WDHYFVYPMSKLLLMLGHAFQENYGLAIVALTIVVRFGLLPLMIKQFRTNIVMQRIRPEM 101 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L++K+K + + LQ+ M+QLY+ H +NP++GC PI +Q+P+F A+Y IS + E+ Sbjct: 102 QKLQQKYKGTDMETQRKLQQEMMQLYQKHGVNPMSGCLPIFIQMPIFMALYYAISRTEEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512 + F L DP I PI+ SL+ FI M++SP Sbjct: 162 KLHSFLWM--QLGHRDPYFI-------------------MPILASLTTFISMRLSPSATT 200 Query: 513 ---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM---KMHGAEIG 565 ++ MPV+ SS P+ L +YW SI+Q V+ K H E Sbjct: 201 TEVATQMKIMSYIMPVMIFMGASSVPSALSLYWVVGGCFSIIQSLVMRAQWKKHQVETA 259 >gi|161508219|ref|YP_001578190.1| stage III sporulation protein [Lactobacillus helveticus DPC 4571] gi|160349208|gb|ABX27882.1| Stage III sporulation protein [Lactobacillus helveticus DPC 4571] Length = 291 Score = 190 bits (484), Expect = 4e-46, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 113/247 (45%), Gaps = 22/247 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ T+ ++++ PL ST M+ IQP+I Sbjct: 49 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIIRVILLPLNAISIRSTTKMQGIQPQI 108 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+L+Q+PV +A+Y I + ++ Sbjct: 109 NELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLPVMYALYGAILRTPQL 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F DL+ DP I + ++ + LS +I +P A Sbjct: 169 QTGRFLWM--DLSKPDPYYIMPILAMVFTF---------------LSTYISQLATPKSAQ 211 Query: 514 KGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G ++ M ++ +F + + +YW SN+ VQ ++ + + + Sbjct: 212 NGMTKVMTYGMAIMVGVMALNFQSAITLYWVISNLFQAVQTFILQNPIKFKKEQEAKAEA 271 Query: 573 TFSKNYN 579 + Sbjct: 272 ERERKRK 278 >gi|297565963|ref|YP_003684935.1| membrane protein insertase, YidC/Oxa1 family [Meiothermus silvanus DSM 9946] gi|296850412|gb|ADH63427.1| membrane protein insertase, YidC/Oxa1 family [Meiothermus silvanus DSM 9946] Length = 454 Score = 190 bits (483), Expect = 5e-46, Method: Composition-based stats. Identities = 82/302 (27%), Positives = 141/302 (46%), Gaps = 35/302 (11%) Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 P+K + + ++ Q +I I G ++ G E + H E+ Sbjct: 182 PTKGYALVLIPRDITPISLNVQNGAGIAQIQIPAGGE---DFKVYGGQNEMVRL-HVERL 237 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 L +P WG + +M + G++ +AI+ T+ V+LL +PL +QY Sbjct: 238 LELPGLFTPDIWGRLSL---GLLWVMETGHRYTGSWFLAIVFLTILVRLLLWPLMHQQYK 294 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A ++ IQP I+E+ +K+K + + +A ++LY+ H +NP AGC P+ LQ+P+ F ++ Sbjct: 295 SMAEIQRIQPLIEEINKKYKDNQEKR-TEATMKLYQEHKVNPAAGCLPLFLQMPILFVLW 353 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 KVIS + + W+ DLA DP I P++ SM Sbjct: 354 KVISNYEF---SQGFLWLPDLALPDPYYIL-------------------PVLYVASMIAS 391 Query: 505 MKMSPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +S A Q+ I ++ ++F+F + FP+G+ IYW S +IS+ QQ +I + A Sbjct: 392 TWLS---AHGNQSAIRQGIFINLIFIFLVLQFPSGVTIYWILSTLISLGQQVLINRSLAA 448 Query: 563 EI 564 Sbjct: 449 RP 450 >gi|228999798|ref|ZP_04159371.1| Membrane protein oxaA 2 [Bacillus mycoides Rock3-17] gi|228759947|gb|EEM08920.1| Membrane protein oxaA 2 [Bacillus mycoides Rock3-17] Length = 260 Score = 190 bits (483), Expect = 5e-46, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 126/244 (51%), Gaps = 33/244 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ +++ + + V G+FGIAI++ T+ V+ PLA QY S MK +QP+ Sbjct: 37 WDHYFVYPISLMLQFVAHHVPGGSFGIAIIIITLLVRSAMIPLAVSQYRSQMKMKKMQPQ 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L+EK + QK M +L KT NPLAGC P+L+Q+P+F A+Y IS + Sbjct: 97 MQKLKEKHGDVSKDIEKQKQYQKEMSELMKTGGWNPLAGCLPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E+R + F +L ADP +I PI+ +L+ FIQMK+ Sbjct: 157 EEIRTSSFLWV--NLGHADPYHIL-------------------PILAALATFIQMKVMQS 195 Query: 511 PADKGQAMIL-----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 G+ + + MP + +F + P+GL++YW N+ +++Q V+ K+ E G Sbjct: 196 NVTPGEQVQMLKVQQFMMPAMILFMGFAAPSGLVLYWITGNIFTMLQTIVLRKVMDREEG 255 Query: 566 LIDR 569 + Sbjct: 256 QLQN 259 >gi|58338216|ref|YP_194801.1| stage III sporulation protein J [Lactobacillus acidophilus NCFM] gi|58255533|gb|AAV43770.1| stage III sporulation protein J [Lactobacillus acidophilus NCFM] Length = 291 Score = 190 bits (483), Expect = 6e-46, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 22/247 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ T+ V+++ PL ST M++IQP+I Sbjct: 49 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIVRVILLPLNAISIRSTTKMQSIQPQI 108 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+++Q+PV +A+Y I + ++ Sbjct: 109 NELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVIIQLPVMYALYGAILRTPQL 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F DL+ DP I + ++ + LS +I +P + Sbjct: 169 QTGRFLWM--DLSKPDPYYIMPILAMVFTF---------------LSTYISQLSTPKSSQ 211 Query: 514 KGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G ++ M ++ +F + + +YW SN+ VQ ++ + + Sbjct: 212 NGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQAVQTFILQNPIKYRKEQEAKNEA 271 Query: 573 TFSKNYN 579 + Sbjct: 272 ERERKRK 278 >gi|323467509|gb|ADX71196.1| Preprotein translocase subunit YidC [Lactobacillus helveticus H10] Length = 303 Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 22/247 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ T+ ++++ PL ST M+ IQP+I Sbjct: 61 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIIRVILLPLNAISIRSTTKMQGIQPQI 120 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+L+Q+PV +A+Y I + ++ Sbjct: 121 NELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLPVMYALYGAILRTPQL 180 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F DL+ DP I + ++ + LS +I +P A Sbjct: 181 QTGRFLWM--DLSKPDPYYIMPILAMVFTF---------------LSTYISQLATPKSAQ 223 Query: 514 KGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G ++ M ++ F A + +YW SN+ VQ ++ + + + Sbjct: 224 NGMTKVMTYGMAIMVGVMALKFQAAITLYWVISNLFQAVQTFILQNPIKFKKEQEAKAEA 283 Query: 573 TFSKNYN 579 + Sbjct: 284 ERERKRK 290 >gi|302543969|ref|ZP_07296311.1| membrane protein OxaA [Streptomyces hygroscopicus ATCC 53653] gi|302461587|gb|EFL24680.1| membrane protein OxaA [Streptomyces himastatinicus ATCC 53653] Length = 378 Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 110/255 (43%), Gaps = 35/255 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + + ++ F++ +G++I+ V +++ PL KQ +T N Sbjct: 4 ILGPLYDVVSWIIVQFHSFYSLIFDRNSGWAWGLSIVSLVVLIRICLIPLFVKQIKATRN 63 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P F A+Y+V++ Sbjct: 64 MQALQPKMKAIQERYKSDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFIALYQVLN 122 Query: 449 ISLE--------------MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 R+A +G + D + G + Sbjct: 123 HIANNKTVGVIDQSLLDSARNAHIFGAPLSVKFMDSASKVESLGA--SLTDVRVVTITMI 180 Query: 495 IIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MS S F + P + Q M++ P++F +FP G+++YW + Sbjct: 181 VLMSASQFFTQRQLMTKNVDLSVKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLVYWLTT 240 Query: 546 NVISIVQQAVIMKMH 560 NV ++ QQ +++ + Sbjct: 241 NVWTLGQQMFVIRRN 255 >gi|328469001|gb|EGF39959.1| hypothetical protein LM220_14040 [Listeria monocytogenes 220] Length = 268 Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 22/224 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L DP I + L +L + M + Sbjct: 162 KTDSFLWM--QLGNPDPYYILPVVAALTTFLSSKI----------------SMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLIN 247 >gi|308071641|ref|YP_003873246.1| membrane protein oxaA 1 precursor [Paenibacillus polymyxa E681] gi|305860920|gb|ADM72708.1| Membrane protein oxaA 1 precursor [Paenibacillus polymyxa E681] Length = 288 Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 119/244 (48%), Gaps = 19/244 (7%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + F G +G+A+++ + V+ + PL KQ S+ M+ IQP++ Sbjct: 46 WQRYVVYWFSYALDTFAQWFSGEYGLAVLILVIIVRTIILPLTLKQVRSSKAMQAIQPQL 105 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E++ K+K P+ +Q+ ++L++ + +NP+AGC P+++Q+P+F A+Y I + +R Sbjct: 106 KEIQAKYK-DTPEKVQQETMKLFQENKVNPMAGCLPLVVQMPIFIALYNAIYYNSALRD- 163 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 L D I + + + + ++ MKM+P P Sbjct: 164 -HDFLWLQLGKPDHLFILPILAAITTF---------------VQTWMMMKMNPTPQQGPM 207 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +L PV+ +F +FP+ L +YW +SN+ +I+Q + + E L + ++ +K Sbjct: 208 QFLLYVYPVLILFMSYNFPSALPLYWFYSNIYTIIQNYFLYRNKDKEAALANVKTASLAK 267 Query: 577 NYNS 580 +S Sbjct: 268 TGSS 271 >gi|269792319|ref|YP_003317223.1| 60 kDa inner membrane insertion protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099954|gb|ACZ18941.1| 60 kDa inner membrane insertion protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 268 Score = 190 bits (482), Expect = 7e-46, Method: Composition-based stats. Identities = 68/252 (26%), Positives = 124/252 (49%), Gaps = 20/252 (7%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 M ++ FY + ++G++I++ TV V++L PL+ KQ VS M+ IQP+I ++EK+ Sbjct: 12 MLRTLNLFYAITHSYGLSIIMLTVVVRILLHPLSHKQMVSMQKMQKIQPRIKVIQEKYAN 71 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA--------- 456 + + + ++QLY+ + +NP AGC P+L+Q+P+F +Y+ + + Sbjct: 72 DK-EKMNQEIMQLYRENGVNPAAGCLPLLVQLPIFILLYRALINYDFSNTSFLGVNLSMS 130 Query: 457 --PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP------IIMSLSMFIQMKMS 508 +++A PT L GIL G +VG++ +++ + Q KMS Sbjct: 131 ALGAMANALGISSAKPTFTAILSGILT-NPAGLANVGVYAPSVILIVLVGFLTWYQQKMS 189 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 + A + +MP+ F S P G++IYW S+ IS+ QQ +M E+ + Sbjct: 190 -SGNNPQMAFMNWFMPLFMSFICLSLPGGVMIYWGASSFISVAQQKWVMMRTEEEMKVKP 248 Query: 569 RLRSTFSKNYNS 580 L ++ Sbjct: 249 TLHKNKPEHQEK 260 >gi|284034939|ref|YP_003384870.1| 60 kDa inner membrane insertion protein [Kribbella flavida DSM 17836] gi|283814232|gb|ADB36071.1| 60 kDa inner membrane insertion protein [Kribbella flavida DSM 17836] Length = 412 Score = 190 bits (482), Expect = 7e-46, Method: Composition-based stats. Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 22/253 (8%) Query: 347 FMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 L+S + G + A I T+ ++ L PL +Q S+ NM+ +QPK+ EL++K+ Sbjct: 39 HWLLSQVLDPNGGWAWALSIAGLTIVIRTLLIPLFVRQIRSSRNMQLLQPKMKELQKKYG 98 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 + L + M++LYK NP + C P+LLQ PVF A+++V+ + + Sbjct: 99 HD-REKLGQEMMKLYKETGTNPFSSCLPLLLQSPVFLALFRVLDGASKGEAHSSI-IAPH 156 Query: 465 LAAADPTNIFTLFGILPFYLPGF-------MHVGIWPIIMSLSMFIQM-----KMSPP-- 510 + + IF F + + I+M+ +MFI K P Sbjct: 157 VNSLRHAKIFGAEISQTFLRANGDGSTNVKIVAIVLIILMTATMFITQLQLMRKNMPKEA 216 Query: 511 ---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-IGL 566 A + Q ++L P+ F+ +FP G++IYW SNV ++ QQ +++ + A Sbjct: 217 LEGQAAQMQKIMLYVFPIFFLIGGFNFPIGVLIYWFVSNVWTMGQQFYVIRRNPAPGTPA 276 Query: 567 IDRLRSTFSKNYN 579 D + + ++ Sbjct: 277 FDAMEARKREHNR 289 >gi|323487690|ref|ZP_08092948.1| membrane protein oxaA 1 [Planococcus donghaensis MPA1U2] gi|323398424|gb|EGA91212.1| membrane protein oxaA 1 [Planococcus donghaensis MPA1U2] Length = 259 Score = 189 bits (481), Expect = 8e-46, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 23/224 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W FI P+ ++YF L+G +G I+ T+ ++L+ PL KQ S+ M+ +QP++ Sbjct: 36 WNEFIVWPLVSTITYFKGLLGTYGFGIIAVTIIIRLVMLPLMVKQTKSSKRMQEVQPELV 95 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +L+EK+K Q QK M+ L++ +NP+AGC P+++Q+PV Y IS Sbjct: 96 KLKEKYKSKDAVTQQKYQKEMMALFQEKGVNPMAGCLPVVIQMPVLIGFYHAISRMNNT- 154 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 P F I P P + +I L F+ ++ P + Sbjct: 155 ---------------PEIDLGSFLIFPLAEPSII----LAVIAGLMQFVVLRTGPAMDNP 195 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +++ +MPV+ + P+ L +YW N+IS++Q VI + Sbjct: 196 QMRIMMYFMPVMIIGFGIVLPSALTLYWVIGNIISLIQNLVIYR 239 >gi|297585590|ref|YP_003701370.1| YidC/Oxa1 family membrane protein insertase [Bacillus selenitireducens MLS10] gi|297144047|gb|ADI00805.1| membrane protein insertase, YidC/Oxa1 family [Bacillus selenitireducens MLS10] Length = 296 Score = 189 bits (481), Expect = 9e-46, Method: Composition-based stats. Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 16/245 (6%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W F P+ LM+ + N +G+AI++ T+ +++L PL KQ ST M+ IQP++ Sbjct: 46 WDPFFVYPLSWLMTTIAEFLNNSYGLAIIIVTIMLRILILPLMIKQTKSTKAMQAIQPQM 105 Query: 397 DELREKF--KQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ K Q LQ+ + L++ + +NPLAGC PI +Q+P+ A Y I + ++ Sbjct: 106 KELQQKYSAKDKKTQEKLQQETMALFQENKVNPLAGCLPIFIQMPILIAFYHAIIRTPQI 165 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + + F L P+++ P++ + FIQ +M + Sbjct: 166 -NPNIDERYVGMYEPQQFLWFELGSADPYFI--------LPLVAGATTFIQQRMMMVQDN 216 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++L MP++ + + FP+ L +YW N+ IVQ I G +G + + Sbjct: 217 PQMKVLLYVMPIMIMAFAAFFPSALALYWVIGNIFMIVQTQFIT---GPNVGKTEEQQKE 273 Query: 574 FSKNY 578 +K Sbjct: 274 ENKKK 278 >gi|56422031|ref|YP_149349.1| OxaA-like protein [Geobacillus kaustophilus HTA426] gi|261420905|ref|YP_003254587.1| OxaA-like protein precursor [Geobacillus sp. Y412MC61] gi|297531689|ref|YP_003672964.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. C56-T3] gi|319768575|ref|YP_004134076.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC52] gi|56381873|dbj|BAD77781.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426] gi|261377362|gb|ACX80105.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC61] gi|297254941|gb|ADI28387.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. C56-T3] gi|317113441|gb|ADU95933.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC52] Length = 254 Score = 189 bits (481), Expect = 9e-46, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L+ Y L+G +FG++I++ T+ ++LL PL +Q + M+ +QP+I Sbjct: 36 WNEYIVYPLSWLIKYVAGLLGGSFGLSIIVVTILIRLLILPLMIQQTRNAKAMQALQPEI 95 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + LR+K+ Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+ Y I + E+ Sbjct: 96 EALRKKYSSKDAQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPILIGFYHAIMRTREI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 F + DL DP I P+I ++ FIQ K+ Sbjct: 156 AQHNFLWF--DLGEKDPYYIL-------------------PVIAGVTTFIQQKIMMAGSA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ V +FPA L +YW N+ SIVQ +I Sbjct: 195 QQNPQMAMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIVQTYLIK 241 >gi|152977287|ref|YP_001376804.1| OxaA-like protein precursor [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026039|gb|ABS23809.1| 60 kDa inner membrane insertion protein [Bacillus cytotoxicus NVH 391-98] Length = 257 Score = 189 bits (481), Expect = 1e-45, Method: Composition-based stats. Identities = 71/241 (29%), Positives = 121/241 (50%), Gaps = 30/241 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ L+ + ++ + G+FG+AI+L T+ V+ PLA QY S MK +QP+ Sbjct: 37 WDHYFVYPISFLLQFAHDHIAGGSFGVAIILITLLVRSAMIPLAISQYRSQMKMKQMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + L++K+ + QK M +L K+ NPLAGC PIL+Q+P+F A+Y IS + Sbjct: 97 LQRLKDKYGDVSKDIEKQKEYQKEMSKLMKSGGWNPLAGCLPILIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E+R + +L ADP I P++ + + F+QMK+ Sbjct: 157 EEIRTSS--FLWVNLGHADPYYIL-------------------PMLAAFTTFLQMKVMQT 195 Query: 511 PADKGQA--MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 D+ Q + MP + +F + P+GL++YW N +++Q ++ K E G + Sbjct: 196 SKDQVQMLKIQQFMMPAMILFMGFAAPSGLVLYWVTGNTFTMMQTIILRKFMEHEQGQLQ 255 Query: 569 R 569 Sbjct: 256 N 256 >gi|21592693|gb|AAM64642.1| chloroplast membrane protein ALBINO3 [Arabidopsis thaliana] Length = 462 Score = 189 bits (481), Expect = 1e-45, Method: Composition-based stats. Identities = 72/256 (28%), Positives = 127/256 (49%), Gaps = 24/256 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M +++ + + +G AI+L T+ VK +PL K+Q ST M+ Sbjct: 111 GWFGFISDAMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQ 170 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QPKI +++++ + + +Q +LYK ++NPLAGC P L IPV+ +Y+ +S Sbjct: 171 NLQPKIKAIQQRYAGN-QERIQLETSRLYKQASVNPLAGCLPTLATIPVWIGLYQALSNL 229 Query: 451 L-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGIW--------PIIMS 498 E + WI L + + P G +G + P+++ Sbjct: 230 ANEGLFTEGFFWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLI 289 Query: 499 LSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 S ++ M++ PP D Q ++ ++P++ + S P+GL IYW +NV+S QQ Sbjct: 290 ASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWLTNNVLSTAQQ 349 Query: 554 AVIMKMHGAEIGLIDR 569 + K+ GA+ + + Sbjct: 350 VYLRKLGGAKPNMDEN 365 >gi|125546414|gb|EAY92553.1| hypothetical protein OsI_14293 [Oryza sativa Indica Group] Length = 533 Score = 189 bits (480), Expect = 1e-45, Method: Composition-based stats. Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 24/264 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W I M ++ + + +G AI+L TV VK FPL KKQ S M++ Sbjct: 99 WLSGITNSMETVLKVLKDGLSALHVPYPYGFAIILLTVLVKAATFPLTKKQVESAIAMRS 158 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ ++E++ + +Q +LYK ++PLAGC P L+ IPV+ +Y+ +S Sbjct: 159 LQPQVKAIQERYAGD-QERIQLETARLYKLSGVDPLAGCLPTLVTIPVWIGLYRALSNVA 217 Query: 452 -EMRHAPFWGWIKDLAAADPTN-------IFTLF----GILPFYLPGFMHVGIWPIIMSL 499 E + WI LA I LF G P + + P+++ + Sbjct: 218 NEGLLTEGFFWIPSLAGPTTIAARQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVI 277 Query: 500 SMFIQMKMSPPPA-----DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 S ++ ++ PP +G ++ ++P++ + S P+GL +YW +N++S QQ Sbjct: 278 SQYVSSQVMQPPQNNDPSQQGAQAVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQV 337 Query: 555 VIMKMHGAEIGLIDRLRSTFSKNY 578 + K+ GA+ + + + S+ KN Sbjct: 338 WLQKLGGAKNPVKEYMISSLKKNQ 361 >gi|309390347|gb|ADO78227.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium praevalens DSM 2228] Length = 216 Score = 189 bits (480), Expect = 1e-45, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 108/220 (49%), Gaps = 15/220 (6%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F ++ M + + YN+VGN+G AI++ T+ +K+ +PL KQ S M+ IQP++ + Sbjct: 2 FDWLINGMAYALDFIYNIVGNYGSAIIIFTLLIKIALYPLTAKQTRSMREMQEIQPEMKK 61 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++ K++ + Q+ M++LY+ H +NP AGC P+++Q+ + +Y+ I + + Sbjct: 62 IQNKYEDDK-EKQQEEMMKLYQEHGVNPAAGCLPMIVQMAILIPLYRTIFALGDKMASEA 120 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + WI + P V + +IM + K+S Sbjct: 121 FLWIGTITNG------------SLAEPDIAIVLLNAVIMLGQTHMTQKLSGGEGKSN--K 166 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ MP+ +F P+G+++YW S + ++ QQ + K Sbjct: 167 MMYMMPLFIIFIGFRLPSGVLLYWFTSTLFTVAQQYFLSK 206 >gi|310644873|ref|YP_003949632.1| membrane protein insertase, yidc/oxa1 family [Paenibacillus polymyxa SC2] gi|309249824|gb|ADO59391.1| Membrane protein insertase, YidC/Oxa1 family [Paenibacillus polymyxa SC2] Length = 288 Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 118/241 (48%), Gaps = 19/241 (7%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + F G +G+A+++ + V+ + PL KQ S+ M+ IQP++ Sbjct: 46 WQRYVVYWFSYALDTFAQWFSGEYGLAVLILVIIVRTIILPLTLKQVRSSRAMQAIQPQL 105 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E++ K+K P+ +Q+ ++L++ + +NP+AGC P+L+Q+P+F A+Y I + +R Sbjct: 106 KEIQAKYK-DTPERVQQETMKLFQENKVNPMAGCLPLLVQMPIFIALYNAIYYNSALRD- 163 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 L D I + + + + ++ MKM+P P Sbjct: 164 -HDFLWLQLGKPDHFFILPILAAITTF---------------IQTWMMMKMNPTPQQGPM 207 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +L PV+ +F +FP+ L +YW +SN+ +IVQ + + + + L + ++ +K Sbjct: 208 QFLLYVYPVLILFMSYNFPSALPLYWFFSNIYTIVQNYFLYRNNDKDAALANVKTASLTK 267 Query: 577 N 577 Sbjct: 268 T 268 >gi|328958800|ref|YP_004376186.1| OxaA-like protein precursor [Carnobacterium sp. 17-4] gi|328675124|gb|AEB31170.1| OxaA-like protein precursor [Carnobacterium sp. 17-4] Length = 267 Score = 188 bits (478), Expect = 2e-45, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 116/246 (47%), Gaps = 28/246 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ ++ + NL G ++G+ I++ T+ ++L+ P+ Q ST M +QP++ Sbjct: 27 WDKYVIFNFSRVIIWLSNLFGGSYGVGIIVFTLIIRLILLPVMHGQTKSTRKMSELQPQL 86 Query: 397 DELREKF--KQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ K + Q L++ +LY +NP+AGC P+L+Q+PV A+Y+ IS + + Sbjct: 87 KELQTKYASKDTDTQSKLKEETSKLYSEAGVNPVAGCLPLLIQMPVLIAMYQAISRTEVL 146 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F +L A DP I PI+ ++ F K MS Sbjct: 147 KTGNFLWM--NLGAPDPYFIL-------------------PILAAILTFATTKLSTMSQA 185 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 A+ +L MP + +F + P+ L +YW N S+ Q ++ + +++ Sbjct: 186 EANPTTTTMLYVMPALILFMGITLPSALSLYWVVGNAFSVAQTLLLNNPFKIKKERDEKI 245 Query: 571 RSTFSK 576 ++ + Sbjct: 246 KTERDR 251 >gi|257470416|ref|ZP_05634507.1| inner membrane protein [Fusobacterium ulcerans ATCC 49185] gi|317064624|ref|ZP_07929109.1| inner membrane protein oxaA [Fusobacterium ulcerans ATCC 49185] gi|313690300|gb|EFS27135.1| inner membrane protein oxaA [Fusobacterium ulcerans ATCC 49185] Length = 208 Score = 188 bits (478), Expect = 2e-45, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 119/223 (53%), Gaps = 22/223 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G + + + ++ + ++L GNFG+AI+ T+ +K++ PL KQ S +MK +QP++ Sbjct: 6 GIYGLLKGVIEAMLVFMHHLTGNFGLAIIGVTILMKIILLPLTLKQDKSMKSMKKLQPEL 65 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 D+L+EK+K P ++L + ++LY+ H +NP GC P+L+Q+P+ +A++ V+ + + + Sbjct: 66 DKLKEKYKGDP-KMLNQKTMELYQQHKVNPAGGCLPLLVQLPILWALFGVLRGGIVPQDS 124 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 F +L DP I P++ + F+Q K+ + Sbjct: 125 TFLWM--ELVKPDPFYIL-------------------PVLNGVVSFVQQKVMGSSDNPQM 163 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ P++ VF PAGL IYW S++ ++QQ +IMK Sbjct: 164 KNMMYMFPIMMVFISYKMPAGLQIYWLTSSLAGVIQQYLIMKR 206 >gi|156530446|gb|ABU75304.1| chloroplast PPF-1 [Citrus trifoliata] Length = 452 Score = 188 bits (478), Expect = 2e-45, Method: Composition-based stats. Identities = 77/256 (30%), Positives = 131/256 (51%), Gaps = 25/256 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ M ++ + + ++G AI+L TV VK+ FPL KKQ ST M+ Sbjct: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QPKI +++++ + + +Q +LY+ +NPLAGC P L IPV+ +Y+ +S Sbjct: 162 NLQPKIKAIQQRYAGN-QERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220 Query: 451 L-EMRHAPFWGWIKDLAAADPT----NIFTLFGILPFYLPGFMHVGI--------WPIIM 497 E + WI L+ + + +LPF + G +G P+++ Sbjct: 221 ANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPF-VDGHPPLGWHDTAAYLVLPVLL 279 Query: 498 SLSMFIQMKMSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +S + M PP PA K ++ ++P++ + S P+GL IYW +NV+S QQ Sbjct: 280 VVSQYAMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 339 Query: 554 AVIMKMHGAEIGLIDR 569 + K+ GA+ + + Sbjct: 340 VWLRKLGGAKPVVTEN 355 >gi|205371916|ref|ZP_03224736.1| OxaA-like protein precursor [Bacillus coahuilensis m4-4] Length = 257 Score = 188 bits (478), Expect = 2e-45, Method: Composition-based stats. Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 27/226 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L+ F +L G ++G++I+ T+ ++L+ PL KQ ++ M+ + P+I Sbjct: 36 WNKYFVFPLSWLIITFADLFGGSYGLSIITVTILIRLVILPLVIKQTQNSKAMQKLSPEI 95 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ Q LQ+ + L++ H +NPLAGC+P+++Q+P+ Y I + + Sbjct: 96 QSLKEKYSSKDAQTQQKLQQETMALFQKHGVNPLAGCFPLIVQMPILIGFYHAIVRTDAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--P 511 + F + DL ADP I P++ + F+Q K+ P Sbjct: 156 KEDSFLWF--DLGVADPYFIL-------------------PLVAGATTFLQQKIMMQGVP 194 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M+L MP++ V SFPA L +YW N+ I+ I Sbjct: 195 QQPQMQMMLYLMPIMIVIFAISFPAALSLYWVVGNIFMIISTYFIK 240 >gi|152968449|ref|YP_001364233.1| hypothetical protein Krad_4510 [Kineococcus radiotolerans SRS30216] gi|151362966|gb|ABS05969.1| 60 kDa inner membrane insertion protein [Kineococcus radiotolerans SRS30216] Length = 337 Score = 188 bits (478), Expect = 2e-45, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 39/273 (14%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG----------NFGIAIMLTTVFVKLLFFPLAKKQYVS 385 + Y I + +M F++ + + ++I+ V +++L PL KQ + Sbjct: 6 YDLLYPIQWVVAWIMVRFHDALTFVGLDPAGGAAWSLSIVGLVVVIRILLIPLFVKQIKA 65 Query: 386 TANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 M+ IQP++ +++ K+K + Q +Q+ M+ LY+ NP+A C PILLQ P+F Sbjct: 66 MRGMQVIQPEMRKIQAKYKGKNDPASRQAMQQEMMALYRESGTNPMASCLPILLQSPIFL 125 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG----------ILPFYLPGFMHVG 491 A++ ++ + D D + T+FG + Sbjct: 126 ALFHTLNGIGKGETVGPL----DRTLVDQADNATIFGSQLSDIFMKSWSTGEWNTIILTA 181 Query: 492 IWPIIMSLSMFIQMK-----------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + ++MSLS F+ K M P + Q M+L +PV+F + +FP G+++ Sbjct: 182 VMIVLMSLSQFVTQKQLMAKNTSSASMEGNPFAQQQKMMLYILPVIFAVSGVNFPIGVLL 241 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 YW +NV S+ QQ +++ L ++ Sbjct: 242 YWLTTNVWSMGQQFFVIRRMPNPGSLAEKELQE 274 >gi|309811342|ref|ZP_07705129.1| membrane protein insertase, YidC/Oxa1 family [Dermacoccus sp. Ellin185] gi|308434649|gb|EFP58494.1| membrane protein insertase, YidC/Oxa1 family [Dermacoccus sp. Ellin185] Length = 387 Score = 188 bits (478), Expect = 2e-45, Method: Composition-based stats. Identities = 75/274 (27%), Positives = 130/274 (47%), Gaps = 36/274 (13%) Query: 340 YFIAKPMFMLMSYFYNLVG-------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +F+A M ++LVG + ++I + +++L PL KQ ++ M+ + Sbjct: 10 WFVAAIMVGW-HKLFSLVGLPEASGWTWALSIAGLVIVLRILLIPLFVKQIHASRRMQLV 68 Query: 393 QPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 QP++ +++ K+K Q+ M++LY+T NPL C PILLQ P FFA+++V++ Sbjct: 69 QPEMQKIQAKYKGKKDPESRAKQQEEMMELYRTTGTNPLGSCLPILLQAPFFFALFRVLN 128 Query: 449 I---SLEMRHAPFWGWIKDLA-AADPTNIFTLFGILPFYLPGFMHVGIWP-----IIMSL 499 + RH + LA A+ + +F F W ++MS Sbjct: 129 NLSKIADGRHDEIGFLTRSLAGQAESSKLFGAKLSDTFMGTDGWGSAKWVAILLIVLMSA 188 Query: 500 SMFIQ----MKMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 + FI M+ + P P K Q +I+ MP+ F + +FP G++IYW +NV + Sbjct: 189 TSFITQHQLMRRNMPKAALEGPMAKQQQIIIYLMPIFFAISGVNFPIGVLIYWFVTNVWT 248 Query: 550 IVQQA-VIMKMH----GAEIGLIDRLRSTFSKNY 578 + QQ VI +M AE L +R R+ ++ Sbjct: 249 MGQQWFVIHRMPTPGSAAEKKLEERNRAKGREHK 282 >gi|260890876|ref|ZP_05902139.1| stage III sporulation protein J [Leptotrichia hofstadii F0254] gi|260859429|gb|EEX73929.1| stage III sporulation protein J [Leptotrichia hofstadii F0254] Length = 228 Score = 188 bits (477), Expect = 3e-45, Method: Composition-based stats. Identities = 65/222 (29%), Positives = 117/222 (52%), Gaps = 19/222 (8%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + + +++ Y +VGN+G+AI++ T+ ++++ FPLA KQ + MK +QP++++++E Sbjct: 7 LVDFVVHVLNAIYGVVGNYGVAIIIVTILMRIIVFPLALKQEKAMKKMKELQPELEKIKE 66 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K +P Q Q+ +LY+ NPLAGC P+L+Q+PVF A+Y S + A F Sbjct: 67 KYKDNP-QEYQRKTAELYRESGANPLAGCLPLLIQMPVFVALYWAFSGNAIPADAKFLW- 124 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-----KGQ 516 P +FT+ G + PI+ + +IQ K+ + Sbjct: 125 ---FTLKQPDRLFTI---------GKFAFNLLPILNVVITYIQQKIMTDATKGQEGSQQM 172 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +L MP + + + P+G+ +Y+ S S+VQQ +I+K Sbjct: 173 QTMLYMMPALMLVIFYNMPSGVTLYYLVSGAWSVVQQYIILK 214 >gi|226229338|ref|YP_002763444.1| inner membrane protein OxaA [Gemmatimonas aurantiaca T-27] gi|226092529|dbj|BAH40974.1| inner membrane protein OxaA [Gemmatimonas aurantiaca T-27] Length = 570 Score = 188 bits (477), Expect = 3e-45, Method: Composition-based stats. Identities = 101/590 (17%), Positives = 204/590 (34%), Gaps = 70/590 (11%) Query: 5 WNYFVAIALSVIIVYAWQNFYV--YPRIEEMNNERKNIQT-----------VKQPNQVDN 51 +A+ L ++ + P M ++ + Sbjct: 4 RRIALAVVLMAAVLILTPYLFPTAKPVPGSMAVAGDSLAADSLRDSVAAAAARVSGSPIA 63 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSL-IGSIN----LKGAQFDDLNLRGYHLDVSS--- 103 A D A L+ ++ + + S + +GA + Y + Sbjct: 64 PVAGATPADSAALLATPVQLSVDTTVVKTASADYRTTNQGAALVGATMTRYQALSNRGRT 123 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT--PIKLVFK 161 V L P + V + I L + S T +L Sbjct: 124 KEGSVELAGPGD----RLLSFRLVVPGDTIAL-DKQIFRTAESSNNGVSTVRYETELAAV 178 Query: 162 NANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + S + Y + + + R + ++ Q Sbjct: 179 AGTPRQVSISYSFQPDSYHVAVAAA---VTGVPETSFLLVDLPRGFRSSEADSVEDQNHL 235 Query: 221 IAVLGDK--SLVEQKYSDIEKSSISNFHESNSWLGISDKYWA-SVFIPSKETSFHSQFKY 277 + S + ++ +W +KY+ V P T F Sbjct: 236 AYAYKPELSSAKGVTFRSLDPGERRIEPGPLTWAVAKNKYFMLGVLTPKGGTPFLEA--N 293 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW- 336 + G +A ++P K+ + G +EF + ++ FE + Sbjct: 294 FTGGPRVAKAATRGEATLVMPLKAGNVAFEAYVGPQEFKRLVAMGRE-----FETSNPYG 348 Query: 337 GWFYFIAKPM----FMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 GW I +P L+ + +G ++G +++ V V+++ +PL ++ S+ M+ Sbjct: 349 GWIQGIVQPFATMVITLLLWMKKTLGVSYGWILVIFGVAVRIILWPLNQRAMRSSMQMQR 408 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL---AGCWPILLQIPVFFAIYKVIS 448 IQP++ ++ + K P Q LQ AM+Q+YK H ++P +GC P+L+ +PVFFA++ V Sbjct: 409 IQPELQAIQARHKGDP-QKLQAAMMQVYKEHGMSPFSSLSGCLPMLIPLPVFFALFFVFQ 467 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 ++E R + W D++ DP I + + + ++ M Sbjct: 468 NTIEFRGVS-FLWFPDISVKDPYYIIPILVAITALVLSWL-----------------GMR 509 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 A++ Q M++ MP + + + +GL +Y+ N+ S+ QQ +I + Sbjct: 510 GIKANEQQKMMMYLMPAMMLIFFVNMASGLNLYYFIQNLASLPQQWLISR 559 >gi|108712061|gb|ABF99856.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza sativa Japonica Group] gi|222626153|gb|EEE60285.1| hypothetical protein OsJ_13341 [Oryza sativa Japonica Group] Length = 510 Score = 187 bits (476), Expect = 3e-45, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 125/266 (46%), Gaps = 24/266 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W I M ++ + + +G AI+L TV VK FPL KKQ S M++ Sbjct: 99 WLSGITNSMETVLKVLKDGLSALHVPYPYGFAIILLTVLVKAATFPLTKKQVESAIAMRS 158 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ ++E++ + +Q +LYK +++PLAGC P L+ IPV+ +Y+ +S Sbjct: 159 LQPQVKAIQERYAGD-QERIQLETARLYKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVA 217 Query: 452 -EMRHAPFWGWIKDLAAADPTN-------IFTLF----GILPFYLPGFMHVGIWPIIMSL 499 E + WI LA I LF G P + + P+++ + Sbjct: 218 NEGLLTEGFFWIPSLAGPTTIAARQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVI 277 Query: 500 SMFIQMKMSPPPA-----DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 S ++ ++ PP +G ++ ++P++ + S P+GL +YW +N++S QQ Sbjct: 278 SQYVSSQVMQPPQNNDPSQQGAQAVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQV 337 Query: 555 VIMKMHGAEIGLIDRLRSTFSKNYNS 580 + K+ GA+ + + + + + Sbjct: 338 WLQKLGGAKNPVKEYIDKLAKEESTN 363 >gi|206978224|ref|ZP_03239104.1| stage III sporulation protein J [Bacillus cereus H3081.97] gi|217962498|ref|YP_002341070.1| OxaA-like protein precursor [Bacillus cereus AH187] gi|222098473|ref|YP_002532531.1| oxaa-like protein precursor [Bacillus cereus Q1] gi|206743583|gb|EDZ55010.1| stage III sporulation protein J [Bacillus cereus H3081.97] gi|217066063|gb|ACJ80313.1| stage III sporulation protein J [Bacillus cereus AH187] gi|221242532|gb|ACM15242.1| probable stage III sporulation protein J [Bacillus cereus Q1] Length = 260 Score = 187 bits (476), Expect = 3e-45, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 123/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 97 LQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 196 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMERE 253 >gi|15613732|ref|NP_242035.1| stage III sporulation protein J [Bacillus halodurans C-125] gi|38503193|sp|Q9KDP2|OXAA2_BACHD RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|10173785|dbj|BAB04888.1| stage III sporulation protein J [Bacillus halodurans C-125] Length = 280 Score = 187 bits (476), Expect = 3e-45, Method: Composition-based stats. Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 11/226 (4%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +F PM L++ NL+ G++G++I++ T+ ++L PL KQ S M+ I+P++ Sbjct: 37 WNHFFVYPMSWLITTVANLLNGSYGLSIIIVTILIRLALLPLTLKQQKSMRAMQVIRPEM 96 Query: 397 DELREKFKQSP------PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +++K+K+ Q +QK ++ LY+ H +NP+AGC P+ +Q+P+ A Y I + Sbjct: 97 EAIQKKYKEKGSKDPKVQQEMQKELLGLYQKHGVNPMAGCLPLFIQLPILMAFYFAIMRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E+R+ F + DL D I + Y M + + + Sbjct: 157 EEIRYHTFLWF--DLGQPD--YILPFVAGITTYFQFKMTMSHQQQMQKTNPSDSDNPMAN 212 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++L MPV+ + A S P+ L +YW N+ I+Q I Sbjct: 213 MMQMQMKVMLYVMPVMIIIAGLSLPSALSLYWVIGNIFMIIQTYFI 258 >gi|221195222|ref|ZP_03568278.1| 60 kDa inner membrane insertion protein [Atopobium rimae ATCC 49626] gi|221185125|gb|EEE17516.1| 60 kDa inner membrane insertion protein [Atopobium rimae ATCC 49626] Length = 252 Score = 187 bits (476), Expect = 3e-45, Method: Composition-based stats. Identities = 61/228 (26%), Positives = 118/228 (51%), Gaps = 6/228 (2%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + +I + ++S G++G+A+++ TV ++LL PL KQ S A M+ +QPK+ E Sbjct: 2 WDWIINLLTSILSGIQGFCGDWGLAVIILTVIIRLLLVPLTNKQTASMARMQVVQPKLKE 61 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +++++ P + Q+ M +LY NPL GC PI LQ+P+FFA++ V H Sbjct: 62 IQDRYADDPVR-QQEEMRKLYAEIKFNPLGGCLPIFLQMPIFFALFTVARNVP---HDAH 117 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + I A+ P +F GI +P + V ++ ++ + M + + Q + Sbjct: 118 FYGILSSIASSPAEVFASSGI-TGVIPYLVFVILFGVLTFIPMMMNANNGASEQKQQQML 176 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-MKMHGAEIG 565 + M +V ++ + PA +++Y+ S++ ++QQ +I K+ +E Sbjct: 177 MGGMMSLVMLWFGWTVPAAVLLYYVTSSLWQVIQQKLITNKILESEKA 224 >gi|30023056|ref|NP_834687.1| OxaA-like protein precursor [Bacillus cereus ATCC 14579] gi|229049708|ref|ZP_04194265.1| Membrane protein oxaA 2 [Bacillus cereus AH676] gi|229112464|ref|ZP_04242001.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-15] gi|229130275|ref|ZP_04259234.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-Cer4] gi|38502940|sp|Q815V9|OXAA2_BACCR RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|29898616|gb|AAP11888.1| 60 kDa inner membrane protein YIDC [Bacillus cereus ATCC 14579] gi|228653208|gb|EEL09087.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-Cer4] gi|228670844|gb|EEL26151.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-15] gi|228722621|gb|EEL74009.1| Membrane protein oxaA 2 [Bacillus cereus AH676] gi|326942840|gb|AEA18736.1| OxaA-like protein precursor [Bacillus thuringiensis serovar chinensis CT-43] Length = 260 Score = 187 bits (476), Expect = 3e-45, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 97 LQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 196 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|47567064|ref|ZP_00237781.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus G9241] gi|229158625|ref|ZP_04286683.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 4342] gi|47556382|gb|EAL14716.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus G9241] gi|228624609|gb|EEK81378.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 4342] Length = 260 Score = 187 bits (476), Expect = 4e-45, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 97 LQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 196 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|229142366|ref|ZP_04270885.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST26] gi|228641136|gb|EEK97448.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST26] Length = 262 Score = 187 bits (475), Expect = 4e-45, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 123/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 99 LQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 159 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 198 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMERE 255 >gi|196249890|ref|ZP_03148586.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16] gi|196210766|gb|EDY05529.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16] Length = 254 Score = 187 bits (475), Expect = 4e-45, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L+ Y L+G +FG++I++ T+ ++LL PL +Q + M+ +QP+I Sbjct: 36 WNEYIVYPLSWLIKYVAELLGGSFGLSIIVVTILIRLLILPLMIQQTRNAKAMQALQPEI 95 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + LR+K+ Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+ Y I + E+ Sbjct: 96 EALRKKYSSKDAQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPILIGFYHAIMRTREI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 F + DL DP I P++ L+ FIQ K+ Sbjct: 156 AQHNFLWF--DLGDKDPYYIL-------------------PLVAGLTTFIQQKIMMAGSA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ V +FPA L +YW N+ SIVQ +I Sbjct: 195 QQNPQMAMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIVQTYLIK 241 >gi|206970211|ref|ZP_03231164.1| stage III sporulation protein J [Bacillus cereus AH1134] gi|229072507|ref|ZP_04205709.1| Membrane protein oxaA 2 [Bacillus cereus F65185] gi|229082266|ref|ZP_04214729.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-2] gi|229181313|ref|ZP_04308643.1| Membrane protein oxaA 2 [Bacillus cereus 172560W] gi|229193300|ref|ZP_04320251.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 10876] gi|206734788|gb|EDZ51957.1| stage III sporulation protein J [Bacillus cereus AH1134] gi|228590277|gb|EEK48145.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 10876] gi|228602206|gb|EEK59697.1| Membrane protein oxaA 2 [Bacillus cereus 172560W] gi|228700698|gb|EEL53221.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-2] gi|228710483|gb|EEL62456.1| Membrane protein oxaA 2 [Bacillus cereus F65185] Length = 260 Score = 187 bits (475), Expect = 5e-45, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FG+AI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WNHYFVYPISYMIQFVAHHIPGASFGVAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 97 LQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 196 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|237752891|ref|ZP_04583371.1| inner membrane protein oxaA [Helicobacter winghamensis ATCC BAA-430] gi|229375158|gb|EEO25249.1| inner membrane protein oxaA [Helicobacter winghamensis ATCC BAA-430] Length = 418 Score = 187 bits (475), Expect = 5e-45, Method: Composition-based stats. Identities = 92/441 (20%), Positives = 177/441 (40%), Gaps = 39/441 (8%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 +A+ L+++ + FY +E N + A + + Sbjct: 13 RIMIAVVLALVFFIPYSYFYQPNSLENNATIVNNDMVKLESTPKAQDVALANVLPTNMSS 72 Query: 66 SMSPRV-ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTKNAYFA 122 S + ++ I I+ G + + L+ YH +S ++L S Sbjct: 73 EDSAIIATIEAEGFIYKIDKLG-RIAIVELKEEKYH----KDSKPLSLFSNDVASQTNPK 127 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHYLFK 181 L+ + + + N+ ++ + ++ +P L N + ++ ++ + +K Sbjct: 128 ILEIRFSDSVLNNQALNSPYSASANHLVLTDSPQSLTLTQELNGLKVQKVLTFYPNGYYK 187 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 + N I + +P + + V +G I D ++ + D + Sbjct: 188 ATIKIPQNYIYFVSPGM-------RPNVENDAY-VFKGAIIKEADDTITTIEDGDAQ-GQ 238 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 ++ + L D+Y+ ++F K + D G + Sbjct: 239 LNFANAKI--LAAVDRYYTTLFFNDKGFNATILSNANED-------------PMPFIGGN 283 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 + G K + + + P ++++G F AKP+F+L+ Y+ GN+G Sbjct: 284 GELVLEGYIGPKNYRLLESID-----PFLTDVVEYGVITFFAKPLFLLLEKLYDFCGNWG 338 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 AI+L T+ V+++ +PL K VS +K + PK+ EL++K+K PQ LQ M+ LYK Sbjct: 339 WAIILLTLIVRIVLYPLTYKGMVSMQKLKELAPKMKELQQKYKG-EPQKLQVHMMDLYKK 397 Query: 422 HNINPLAGCWPILLQIPVFFA 442 H NP+ GC P+LLQIPVFFA Sbjct: 398 HGANPMGGCLPLLLQIPVFFA 418 >gi|229032660|ref|ZP_04188623.1| Membrane protein oxaA 2 [Bacillus cereus AH1271] gi|228728659|gb|EEL79672.1| Membrane protein oxaA 2 [Bacillus cereus AH1271] Length = 260 Score = 187 bits (474), Expect = 5e-45, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAISQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 97 LQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 196 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMERE 253 >gi|325066325|ref|ZP_08124998.1| 60 kDa inner membrane insertion protein [Actinomyces oris K20] Length = 394 Score = 187 bits (474), Expect = 5e-45, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 31/272 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +L+ + + ++I+ T+ V+LL PL KQ ++ M+ +QP++ Sbjct: 14 WVMVTIHKALVLIGFPDGPGIAWVLSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPELQ 73 Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+ K+K Q + + M+ LY+ H NP+A C PIL+Q+P+FFA+++V++ + Sbjct: 74 ALQAKYKGKKDPESRQRMNEEMMALYRKHGTNPMASCLPILVQMPIFFALFRVLASLGAV 133 Query: 454 RHAPFWGW-IKDLAA--ADPTNIFTLFGILPFY-------LPGFMHVGIWPIIMSLSMFI 503 + I L A+ ++FG + IIMS++ + Sbjct: 134 AGGTYGRPSIGPLTQQLAEQVQASSVFGASLSSSFLGSSDTQVKIVTVAMIIIMSVTQWY 193 Query: 504 QMKM------------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 M S P + Q M+L MPV+F + +F G+++YW SN+ ++ Sbjct: 194 TMAQLSMKNMSTDSLNSDNPMIRSQRMMLYVMPVIFAVSGVNFQIGVLVYWVVSNLWTMG 253 Query: 552 QQAVIMKMH-----GAEIGLIDRLRSTFSKNY 578 QQ ++ AE R+ + ++ Sbjct: 254 QQFFTIRNMPAPGSEAEKKYRARINAKRARKG 285 >gi|320104138|ref|YP_004179729.1| membrane protein insertase, YidC/Oxa1 family [Isosphaera pallida ATCC 43644] gi|319751420|gb|ADV63180.1| membrane protein insertase, YidC/Oxa1 family [Isosphaera pallida ATCC 43644] Length = 748 Score = 187 bits (474), Expect = 5e-45, Method: Composition-based stats. Identities = 127/684 (18%), Positives = 239/684 (34%), Gaps = 112/684 (16%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV---------------YPRIEEMNNERKNIQTVKQ 45 M F+ + + + + + E K + Q Sbjct: 1 MNDQLKRFLIFLPLAMAILVFSPLVMERLGLVPPPPPPADPALAANDDAPEEKPVAKDGQ 60 Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVEL-------------KNPS---LIGSINLKGAQF 89 + A + V++ N + L I+ +G Sbjct: 61 EGSMPAPPAGQPPQAEPVPPPSAADVKIWPSDELVLGSSDPDNQAGFFLKLVIDQRGGGV 120 Query: 90 DDLNLRGYHLDVS----SNSPIVTLLS------PSNTKNAYFAELDYVSTANNIELPNSN 139 Y + S P+V + P F +A + L SN Sbjct: 121 VRAESALYESEHDFKGGSTGPLVLIERLEDHPAPLGLDLVRFKGASGAISAGDPSLRLSN 180 Query: 140 TVWNL---ISGKILTP----TTPIKLVFKNAN-NILFERTISLDEHYLFKIVDTVTNNSI 191 W + G+ +TP ++L + + +T L + S Sbjct: 181 VTWEVLPDAQGRAVTPLEDGGQELRLQTQVGQPPVTVVKTYRLRPR-TDGFEHELKFVSP 239 Query: 192 DQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK----------YSDIEKSS 241 + + R + P F ++ VE Y + Sbjct: 240 EDREIAYRLLVPYGLPVEGAWYTMTFRDFFHAGENQGQVEIATLTASDVSWYYGKGKDYQ 299 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKET------------SFHSQFKYLSDGHARYQAKF 289 + + GI ++Y+A P + + + + A+ Sbjct: 300 ETYQTYPLRFTGIENRYFAVFLAPQQPNLTQADRYDQETVPLELRANPANRALSDIAAEV 359 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW--GWFYFIAKPM- 346 + I++ + + T +FAG K+ + + +P + L + G+ +A M Sbjct: 360 VSRPISLTANQPVVHTYKVFAGPKDRDRLLAF----GVPGADELAAFRAGFSIPLAGSMS 415 Query: 347 ----FMLMSYFYNLV-----------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 L+ Y L GN+G+AI+L T F++L FPL++KQ V M++ Sbjct: 416 KYVISPLLRITYGLTESVSRLFGGTQGNYGVAIILMTCFIRLCLFPLSRKQAVMAKKMQD 475 Query: 392 IQPKIDELREKFK---------QSPPQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFF 441 +QP I E+++K Q LQ+ LY H +NP++ GC P L+Q+PV Sbjct: 476 LQPLIKEIQDKIAKGRNLMDLSQEEKLQLQQETWALYGRHKVNPISAGCLPALIQLPVMV 535 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +++ ++ S+++R+A + +I +LAA D F LPF P F + PI+ Sbjct: 536 GLWQALNQSVDLRNAT-FLYIDNLAAPDMLARFPFGWDLPFLGPYF---NLLPILAVGLT 591 Query: 502 FIQMKM-SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +QMK+ SPPPA+ Q I +M V F+F P+GL +Y+ S++ + ++ ++ Sbjct: 592 LVQMKLFSPPPANPEAEMQQKIFKYMMVFFMFMFYKLPSGLGVYFITSSLWQVGERLLVN 651 Query: 558 KMHGAEIGLIDRLRSTFSKNYNSQ 581 + + + +N + Sbjct: 652 WLAKRNPVDVYEVERQARENPKLK 675 >gi|228942189|ref|ZP_04104729.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975118|ref|ZP_04135677.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981757|ref|ZP_04142052.1| Membrane protein oxaA 2 [Bacillus thuringiensis Bt407] gi|228777869|gb|EEM26141.1| Membrane protein oxaA 2 [Bacillus thuringiensis Bt407] gi|228784639|gb|EEM32659.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817523|gb|EEM63608.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 262 Score = 187 bits (474), Expect = 5e-45, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 99 LQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 159 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 198 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 255 >gi|329944746|ref|ZP_08292825.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral taxon 170 str. F0386] gi|328529882|gb|EGF56772.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral taxon 170 str. F0386] Length = 403 Score = 187 bits (474), Expect = 6e-45, Method: Composition-based stats. Identities = 62/250 (24%), Positives = 116/250 (46%), Gaps = 31/250 (12%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAM 415 + ++I+ T+ V+LL PL KQ ++ M+ +QP++ L+ K+K Q + + M Sbjct: 36 WVLSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPEMKALQAKYKGKKDPESRQRMNEEM 95 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW-IKDLAA--ADPTN 472 + LY+ H NP+A C PIL+Q+P+FFA+++V++ + + I L A+ Sbjct: 96 MALYRKHGTNPMASCLPILVQMPIFFALFRVLASLGAVAGGTYGRPSIGPLTQQLAEQVQ 155 Query: 473 IFTLFGILPFY-------LPGFMHVGIWPIIMSLSMFIQMKM------------SPPPAD 513 ++FG + IIMS++ + M S P Sbjct: 156 ASSVFGASLSSSFMSSADTQVKIVTVAMIIIMSVTQWYTMAQLTMKNMSAESMDSDNPMI 215 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH-----GAEIGLID 568 + Q M++ MPV+F + +F G+++YW SN+ ++ QQ ++ AE Sbjct: 216 RSQRMMMYVMPVIFAISGVNFQIGVLVYWVISNLWTMGQQFFTIRNMPAPGSEAEKKYRA 275 Query: 569 RLRSTFSKNY 578 R+ + ++ Sbjct: 276 RVNAKRARKG 285 >gi|238018226|ref|ZP_04598652.1| hypothetical protein VEIDISOL_00050 [Veillonella dispar ATCC 17748] gi|237864697|gb|EEP65987.1| hypothetical protein VEIDISOL_00050 [Veillonella dispar ATCC 17748] Length = 222 Score = 187 bits (474), Expect = 6e-45, Method: Composition-based stats. Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 29/235 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLV-----GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 F+ I + M L++Y + L ++G+AI+L T+ +K + PL KQ S M+ + Sbjct: 7 IFHPIVELMTTLVTYAFQLTQMVGYPSYGVAIILLTIVIKAILAPLTVKQIKSMKAMQEL 66 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP++ EL++K+K P + LQ M LYK +NPLAGC P+L+Q+P AI+ + Sbjct: 67 QPRMKELQDKYKNDPAK-LQAEMGALYKEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPY 125 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-- 510 ++ + W+ L DP I P++ + S +I K + Sbjct: 126 DQNYVQFLWLPSLGEPDPMYIL-------------------PVLSAASTWIMSKQTSSGA 166 Query: 511 --PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 A + Q ++ +MP+ + +FP+GL+IYW SNV VQQ I K A+ Sbjct: 167 SGAAAQQQKIMTIFMPLFIGYISLNFPSGLVIYWIVSNVFQFVQQHFIYKGLEAK 221 >gi|228988273|ref|ZP_04148368.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771445|gb|EEM19916.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 262 Score = 187 bits (474), Expect = 6e-45, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 99 LQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 159 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 198 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 255 >gi|294101695|ref|YP_003553553.1| membrane protein insertase, YidC/Oxa1 family [Aminobacterium colombiense DSM 12261] gi|293616675|gb|ADE56829.1| membrane protein insertase, YidC/Oxa1 family [Aminobacterium colombiense DSM 12261] Length = 263 Score = 187 bits (474), Expect = 6e-45, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 123/246 (50%), Gaps = 20/246 (8%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + +++ +NL G++GIAI+L T+ V++L PL KQ VS M+ +QP++ L+EK+K Sbjct: 12 ILLILETLHNLTGSWGIAIILLTLAVRILLHPLTHKQMVSMQRMQKLQPRMKMLQEKYKD 71 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS----------LEMRH 455 + L + ++ LYK + +NP AGC P+L+Q+P+ +++++ + + Sbjct: 72 DK-ETLNREIMSLYKENKVNPAAGCLPLLVQLPILILLFRLLMNYNFGSVPFLGFISLEG 130 Query: 456 APFWGWIKDLAAADPTNI--FTLFGILPFYLPGFMHVGIW------PIIMSLSMFIQMKM 507 + + +A + T I + + G VG++ +++ + + Q +M Sbjct: 131 SVLSTLAQAVALPETTKIGVMAVLSGVLANPAGLAQVGLYLGNLMLLVVVGILTWAQQQM 190 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 S + AM+ +MP+ F S P G+++YW S+ + + QQ I K E+ Sbjct: 191 SST-GNPQMAMMSWFMPLFLTFICLSLPGGVLLYWGVSSFLGVAQQWWITKKTSQEMQEK 249 Query: 568 DRLRST 573 L + Sbjct: 250 PVLHKS 255 >gi|324328956|gb|ADY24216.1| OxaA-like protein precursor [Bacillus thuringiensis serovar finitimus YBT-020] Length = 260 Score = 187 bits (474), Expect = 6e-45, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 97 LQKLKKKYGDVSKNLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 196 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMERE 253 >gi|218235777|ref|YP_002369825.1| OxaA-like protein precursor [Bacillus cereus B4264] gi|228961262|ref|ZP_04122882.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229147568|ref|ZP_04275914.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST24] gi|229153210|ref|ZP_04281389.1| Membrane protein oxaA 2 [Bacillus cereus m1550] gi|296505459|ref|YP_003667159.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171] gi|218163734|gb|ACK63726.1| stage III sporulation protein J [Bacillus cereus B4264] gi|228630309|gb|EEK86959.1| Membrane protein oxaA 2 [Bacillus cereus m1550] gi|228635893|gb|EEK92377.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST24] gi|228798468|gb|EEM45461.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|296326511|gb|ADH09439.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171] Length = 260 Score = 187 bits (474), Expect = 6e-45, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 97 LQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 196 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|255076059|ref|XP_002501704.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299] gi|226516968|gb|ACO62962.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299] Length = 480 Score = 186 bits (473), Expect = 7e-45, Method: Composition-based stats. Identities = 78/282 (27%), Positives = 119/282 (42%), Gaps = 29/282 (10%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDW---GWFYFIAKPMFMLMSYFYN-LVG-----N 359 F G ++ E L GW I + ++ + VG + Sbjct: 82 FIGNDAVASLFQVADAADAAAPEELKGLQKGGWLGPITDLLESILKGIDSGFVGLGVPYS 141 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+ TV VK++ FPL KKQ + M+ IQP++ EL+ + P + LQ +LY Sbjct: 142 YGYAILALTVLVKVVTFPLTKKQVEGSLQMQAIQPRVKELQAMYANDP-ERLQMETARLY 200 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISIS-LEMRHAPFWGWIKDLAAA-------DPT 471 K N NPLAGC P +PVF +Y+ +S + +E + WI L D Sbjct: 201 KEANFNPLAGCLPTFATLPVFIGLYRALSNAAVEGELTDGFYWIPSLGGPTSIEARNDGN 260 Query: 472 NIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-------PADKGQAMIL 520 LF G P + + P+++ S I K+ P PA + IL Sbjct: 261 GFAWLFPFVDGAPPLGWHDTIAYLVLPVLLVASQLISQKVMTPDQPKSDDPAQQQSQAIL 320 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++P + F + PAGL +YW +N+ S Q + K A Sbjct: 321 KFLPFMIGFFSLNVPAGLTLYWFANNIFSTAQTVYLRKTTKA 362 >gi|228955284|ref|ZP_04117292.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804417|gb|EEM51028.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 262 Score = 186 bits (473), Expect = 7e-45, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FG+AI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WNHYFVYPISYMIQFVAHHIPGASFGVAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 99 LQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 159 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 198 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 255 >gi|255581095|ref|XP_002531362.1| Inner membrane protein PPF-1, chloroplast precursor, putative [Ricinus communis] gi|223529022|gb|EEF31010.1| Inner membrane protein PPF-1, chloroplast precursor, putative [Ricinus communis] Length = 449 Score = 186 bits (473), Expect = 7e-45, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 24/256 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ M ++ + + + +G AI+L TV VK+ PL K+Q ST M+ Sbjct: 95 GWFGFISEGMEFVLKVLKDGLSSVHVPYSYGFAIILLTVIVKIATLPLTKQQVESTLAMQ 154 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QPKI +++++ + + +Q +LY+ +NPLAGC+P L IPV+ +Y+ +S Sbjct: 155 NLQPKIKAIQQRYAGN-QERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNV 213 Query: 451 L-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGIWPIIM--------S 498 E + WI L + + P G +G + Sbjct: 214 ANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLV 273 Query: 499 LSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +S ++ M++ PP D Q ++ ++P++ + S P+GL IYW +NV+S QQ Sbjct: 274 VSQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFVNNVLSTAQQ 333 Query: 554 AVIMKMHGAEIGLIDR 569 + K+ GA+ + Sbjct: 334 VWLRKLGGAKPVVDQN 349 >gi|229118494|ref|ZP_04247848.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-3] gi|228665064|gb|EEL20552.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-3] Length = 260 Score = 186 bits (473), Expect = 7e-45, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 97 LQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 196 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|108805992|ref|YP_645929.1| protein translocase subunit yidC [Rubrobacter xylanophilus DSM 9941] gi|108767235|gb|ABG06117.1| protein translocase subunit yidC [Rubrobacter xylanophilus DSM 9941] Length = 278 Score = 186 bits (473), Expect = 8e-45, Method: Composition-based stats. Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 39/250 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F I + ++ +F+ +G + ++I L TV V+ L FPL KQ S ++ ++P+I Sbjct: 16 FDPIVDVLGAVLRFFHYDLGVEWWLSIALLTVVVRALLFPLTLKQMKSMRALQELRPEIQ 75 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ++ +++ +P Q+ + M++LY+ N+NPL GC P+L+Q+P+F I+ VI + Sbjct: 76 RIQRQYRDNP-QLRNQEMMKLYQERNVNPLGGCLPLLVQMPIFIGIFYVIREFGGYSYGG 134 Query: 458 F-------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 W +DL+ ADP I P++ +L+M Sbjct: 135 RVVEPSEPTFETGGILWFQDLSQADPYYIL-------------------PVLSALTMLAG 175 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM-----KM 559 ++S + Q I+ +P L +FPAGL +YW +N+++I Q I + Sbjct: 176 TEISAKYMEPQQRWIMRIVPFAITLFLWNFPAGLFVYWISNNLVTIAQNYFIYNYGPGRR 235 Query: 560 HGAEIGLIDR 569 E +D+ Sbjct: 236 EEGETKKLDQ 245 >gi|301056511|ref|YP_003794722.1| OxaA-like protein precursor [Bacillus anthracis CI] gi|300378680|gb|ADK07584.1| OxaA-like protein precursor [Bacillus cereus biovar anthracis str. CI] Length = 260 Score = 186 bits (473), Expect = 8e-45, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ + PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSVMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 97 LQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 157 EEIRTST--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P + M MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 196 NSTPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 253 >gi|51894472|ref|YP_077163.1| SpoIIIJ [Symbiobacterium thermophilum IAM 14863] gi|51858161|dbj|BAD42319.1| SpoIIIJ [Symbiobacterium thermophilum IAM 14863] Length = 249 Score = 186 bits (473), Expect = 8e-45, Method: Composition-based stats. Identities = 58/218 (26%), Positives = 113/218 (51%), Gaps = 25/218 (11%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 ++ +PM L+ F GN+G+AI+L TV V+++ PL Q S M+ +QP + EL+ Sbjct: 37 WLVQPMTKLLEVFLKWTGNYGLAIILLTVVVRIVILPLTVYQMRSMKRMQEVQPLMKELQ 96 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR-HAPFW 459 +K+K +P + L + ++ LY+ +NP +GC P+L+Q+P+ +A++ V + + + + Sbjct: 97 DKYKDNP-EKLNQELMALYQREKVNPFSGCLPLLVQLPILYALFAVFNAFDPTKFNYTYQ 155 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAM 518 DL+ D I+ +SM +Q ++ P D Q + Sbjct: 156 FLWADLSQRD---------------------IPLAILTVVSMILQQYLTGMPTTDPNQRV 194 Query: 519 ILNWMPVVFVFALSSFP-AGLIIYWSWSNVISIVQQAV 555 ++ MP++F + + P + +++YW S ++QQA+ Sbjct: 195 MMWIMPIMFGWIAFTMPTSSIVLYWVVSTFFGLIQQAI 232 >gi|295697833|ref|YP_003591071.1| membrane protein insertase, YidC/Oxa1 family [Bacillus tusciae DSM 2912] gi|295413435|gb|ADG07927.1| membrane protein insertase, YidC/Oxa1 family [Bacillus tusciae DSM 2912] Length = 246 Score = 186 bits (473), Expect = 8e-45, Method: Composition-based stats. Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 21/221 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W+ + F ++GIAI++ T+ ++L+ PL +Q + M+ +QP+ Sbjct: 36 WWGAFVGWFSDGIDLFARWTHDYGIAILVVTILIRLITLPLWLRQMKYSKVMQEMQPQFQ 95 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +LR+K+ + + L + M++L++ +NPL+GC P L+Q+P+ +A+Y+ I + + A Sbjct: 96 KLRQKYGDNK-EKLNEEMVKLFQQTGVNPLSGCLPTLIQLPILWALYQAIRSNAML-QAH 153 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + I L D I P++ +++ +IQ KM DK Q Sbjct: 154 EFLGIWPLGQPDHYFIL-------------------PVLAAVTTYIQSKMMLTTNDKQQQ 194 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MIL MP++ +F S P+ L +YW ++N+++I+Q K Sbjct: 195 MILVMMPLMILFIAVSLPSALSLYWVYTNLLTIIQYYFFTK 235 >gi|228923750|ref|ZP_04087028.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835879|gb|EEM81242.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 260 Score = 186 bits (473), Expect = 8e-45, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHISGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 97 LQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 196 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|312144701|ref|YP_003996147.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium sp. 'sapolanicus'] gi|311905352|gb|ADQ15793.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium sp. 'sapolanicus'] Length = 216 Score = 186 bits (472), Expect = 9e-45, Method: Composition-based stats. Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 15/220 (6%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F ++ M + + Y +VGN+G+AI++ T+ +K++ +PL KQ S M+ IQP++ + Sbjct: 2 FDWLINGMTYALDFIYGIVGNYGLAIVIFTLIIKIVLYPLTAKQTRSMREMQEIQPEMKK 61 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++ K++ + Q+ M++LYK H +NP AGC+P+++Q+ + +Y+ I + Sbjct: 62 IQNKYEDDK-EKQQEEMMKLYKDHGVNPAAGCFPMIVQMAILIPLYRTIFTLGDQMANEA 120 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + WI + P V + + M I ++S Sbjct: 121 FLWIGTITQG------------SLAEPDIAIVLLNAVAMLAQTHITQQISGGGEKSN--K 166 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ MP+ VF PAG+++YW S + ++ QQ V+ K Sbjct: 167 MMYMMPLFIVFIGFRLPAGVLVYWFVSTLFTVGQQYVLSK 206 >gi|86743220|ref|YP_483620.1| 60 kDa inner membrane insertion protein [Frankia sp. CcI3] gi|86570082|gb|ABD13891.1| 60 kDa inner membrane insertion protein [Frankia sp. CcI3] Length = 462 Score = 186 bits (472), Expect = 9e-45, Method: Composition-based stats. Identities = 77/252 (30%), Positives = 118/252 (46%), Gaps = 36/252 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +F+ P+F S+F ++ +++L V V++L FPL KQ S M+ +QP+I Sbjct: 15 FFHRGFAPIFGADSFF-----SWAFSVVLLVVCVRILIFPLFVKQVKSQRTMQMMQPRIK 69 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+REK P+ +Q+ M+ L + H NPL GC PI LQIP+F +++ V + M P Sbjct: 70 EIREKHGHDKPR-MQQEMMALQREHG-NPLLGCLPIFLQIPLFISLFHVFTHLAPMNEGP 127 Query: 458 F----WGWIKDLAAADPTNIFT--LFGILP------------FYLPGFMHVGIWPI---- 495 W L+A I + +FGI F HV I I Sbjct: 128 NHSLVWRPRVGLSADQVEQIASAKVFGISLASKFTSDGDFSHFLGVDSTHVRILAIVLIV 187 Query: 496 IMSLSMFIQMKMSPP---PADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 +M L+ F+ + P D QAM+ L P++ F FP +++YW +N+ Sbjct: 188 LMGLTTFLTQRQIMARTGPLDPQQAMVQKALLYGSPLMLAFFGFRFPIAVLLYWLTTNLW 247 Query: 549 SIVQQAVIMKMH 560 S+ QQ IMK Sbjct: 248 SMGQQFFIMKKM 259 >gi|228910857|ref|ZP_04074666.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 200] gi|228848808|gb|EEM93653.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 200] Length = 262 Score = 186 bits (472), Expect = 9e-45, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 99 LQKLKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 159 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 198 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 255 >gi|41469653|gb|AAS07376.1| putative inner membrane protein (with alternative splicing) [Oryza sativa Japonica Group] gi|108712060|gb|ABF99855.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza sativa Japonica Group] Length = 489 Score = 186 bits (472), Expect = 1e-44, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 125/266 (46%), Gaps = 24/266 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W I M ++ + + +G AI+L TV VK FPL KKQ S M++ Sbjct: 99 WLSGITNSMETVLKVLKDGLSALHVPYPYGFAIILLTVLVKAATFPLTKKQVESAIAMRS 158 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ ++E++ + +Q +LYK +++PLAGC P L+ IPV+ +Y+ +S Sbjct: 159 LQPQVKAIQERYAGD-QERIQLETARLYKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVA 217 Query: 452 -EMRHAPFWGWIKDLAAADPTN-------IFTLF----GILPFYLPGFMHVGIWPIIMSL 499 E + WI LA I LF G P + + P+++ + Sbjct: 218 NEGLLTEGFFWIPSLAGPTTIAARQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVI 277 Query: 500 SMFIQMKMSPPPA-----DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 S ++ ++ PP +G ++ ++P++ + S P+GL +YW +N++S QQ Sbjct: 278 SQYVSSQVMQPPQNNDPSQQGAQAVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQV 337 Query: 555 VIMKMHGAEIGLIDRLRSTFSKNYNS 580 + K+ GA+ + + + + + Sbjct: 338 WLQKLGGAKNPVKEYIDKLAKEESTN 363 >gi|167629167|ref|YP_001679666.1| stage iii sporulation protein j/oxaa-like protein precursor [Heliobacterium modesticaldum Ice1] gi|167591907|gb|ABZ83655.1| stage iii sporulation protein j/oxaa-like protein precursor [Heliobacterium modesticaldum Ice1] Length = 222 Score = 186 bits (472), Expect = 1e-44, Method: Composition-based stats. Identities = 70/236 (29%), Positives = 124/236 (52%), Gaps = 33/236 (13%) Query: 342 IAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + ++++FY + + ++G+AI+L T+ +K+L +PL+ KQ S M + PK Sbjct: 5 LVDAFSSMINFFYIITQQIGIPSYGLAIILITIVIKMLLYPLSAKQMKSMKVMAELAPKQ 64 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 L+EK+K+ P Q Q+AM+QLYK H +NPL+GC P+L+Q P+ A Y + + A Sbjct: 65 KALQEKYKKDP-QKAQEAMMQLYKEHGVNPLSGCLPLLIQFPILIAFYNGLMAFPYLNEA 123 Query: 457 P-FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP------ 509 + W+ +L+A DP + P++ + + F+QMK++P Sbjct: 124 HATFLWVANLSAPDPYIL--------------------PLLATATTFLQMKVTPSSAGGN 163 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P A++ Q +++ MP++ + SF AGL +YW N + I+QQ + + Sbjct: 164 PQAEQTQKIMMYSMPLLIGWMAHSFAAGLSLYWVTFNTVGILQQLYMNRSLNVRKE 219 >gi|52140514|ref|YP_086317.1| OxaA-like protein precursor [Bacillus cereus E33L] gi|196040458|ref|ZP_03107758.1| stage III sporulation protein J [Bacillus cereus NVH0597-99] gi|51973983|gb|AAU15533.1| probable stage III sporulation protein J [Bacillus cereus E33L] gi|196028590|gb|EDX67197.1| stage III sporulation protein J [Bacillus cereus NVH0597-99] Length = 260 Score = 186 bits (472), Expect = 1e-44, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 124/238 (52%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 97 LQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 157 EEIRTST--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P + M MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 196 NSTPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 253 >gi|229076403|ref|ZP_04209368.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-18] gi|229099477|ref|ZP_04230406.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-29] gi|229105635|ref|ZP_04236268.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-28] gi|228677771|gb|EEL32015.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-28] gi|228683973|gb|EEL37922.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-29] gi|228706838|gb|EEL59046.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-18] Length = 262 Score = 186 bits (472), Expect = 1e-44, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 99 LQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 159 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 198 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 255 >gi|229199168|ref|ZP_04325850.1| Membrane protein oxaA 2 [Bacillus cereus m1293] gi|228584311|gb|EEK42447.1| Membrane protein oxaA 2 [Bacillus cereus m1293] Length = 262 Score = 186 bits (472), Expect = 1e-44, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 99 LQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 159 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + M MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 198 NITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMERE 255 >gi|138897069|ref|YP_001127522.1| OxaA-like protein [Geobacillus thermodenitrificans NG80-2] gi|134268582|gb|ABO68777.1| Stage III sporulation [Geobacillus thermodenitrificans NG80-2] Length = 238 Score = 186 bits (472), Expect = 1e-44, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L+ Y L+G +FG++I++ T+ ++LL PL +Q + M+ +QP+I Sbjct: 20 WNEYIVYPLSWLIKYVAELLGGSFGLSIIVVTILIRLLILPLMIQQTRNAKAMQALQPEI 79 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + LR+K+ Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+ Y I + E+ Sbjct: 80 EALRKKYSSKDAQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPILIGFYHAIMRTREI 139 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 F + DL DP I P++ L+ FIQ K+ Sbjct: 140 AQHNFLWF--DLGDKDPYYIL-------------------PLVAGLTTFIQQKIMMAGSA 178 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ V +FPA L +YW N+ SIVQ +I Sbjct: 179 QQNPQMAMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIVQTYLIK 225 >gi|269958144|ref|YP_003327933.1| 60 kDa inner membrane insertion protein [Xylanimonas cellulosilytica DSM 15894] gi|269306825|gb|ACZ32375.1| 60 kDa inner membrane insertion protein [Xylanimonas cellulosilytica DSM 15894] Length = 314 Score = 185 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 128/267 (47%), Gaps = 23/267 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W + A +F + + + +AI+ T+ ++ PL KQ ++ M+ IQP++ Sbjct: 17 WVMYGAHWVFARLGFGDGPGFAWVLAIVALTLIMRAAMIPLFVKQIKASRGMQIIQPELQ 76 Query: 398 ELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +++K+K + + + + ++LYK H NP A C PILLQ P+FFA+++V+S ++ Sbjct: 77 AVQKKYKGKSDPASREAMTRETMELYKKHGTNPFASCLPILLQSPIFFALFRVLSNLQQI 136 Query: 454 RHAPFWGWIK-DLAAADPTNIFTLFG-------ILPFYLPGFMHVGIWPIIMSLSMFIQ- 504 + D A A +LFG + + V + I+MS + F+ Sbjct: 137 ANGEIGPIGPIDQAVASDFEASSLFGAKLSEVFLQTDDTAARIVVIVLIILMSATTFLTQ 196 Query: 505 ----MKMSPP-----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 MK P P Q M+L +P++F + +FP G++IYW+ +N+ S+ QQ Sbjct: 197 RQLTMKNMPKAALEGPMASTQKMMLYVLPLIFAVSGVNFPVGVLIYWTVTNIWSMGQQFY 256 Query: 556 IMKMHGAEIGLIDR-LRSTFSKNYNSQ 581 +K A +R L+ ++ ++ Sbjct: 257 TIKRMPAPGSEAERTLKERQARKAAAK 283 >gi|320532819|ref|ZP_08033596.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral taxon 171 str. F0337] gi|320134970|gb|EFW27141.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral taxon 171 str. F0337] Length = 397 Score = 185 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 33/273 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +L+ + + ++I+ T+ V+LL PL KQ ++ M+ +QP++ Sbjct: 14 WVMVTIHKALVLIGFPDGPGIAWVLSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPELQ 73 Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+ K+K Q + + M+ LY+ H NP+A C PIL+Q+P+FFA+++V++ + Sbjct: 74 ALQAKYKGKKDPESRQRMNEEMMALYRKHGTNPMASCLPILVQMPIFFALFRVLASLGAV 133 Query: 454 RHA----PFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIMSLSMF 502 P G + A+ ++FG + IIMS++ + Sbjct: 134 ATGKYGRPSIGPLTQQ-LAEQVQASSVFGASLSSSFLSSSDTQVKIVTVAMIIIMSVTQW 192 Query: 503 IQMKM------------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 M S P + Q M+L MPV+F + +F G+++YW SN+ ++ Sbjct: 193 YTMAQLSMKNMSTESLNSDNPMIRSQRMMLYVMPVIFAVSGVNFQIGVLVYWVVSNLWTM 252 Query: 551 VQQAVIMKMH-----GAEIGLIDRLRSTFSKNY 578 QQ ++ AE R+ + ++ Sbjct: 253 GQQFFTIRNMPAPGSEAEKKYRARINAKRARKG 285 >gi|227878344|ref|ZP_03996301.1| stage III sporulation protein J [Lactobacillus crispatus JV-V01] gi|227862080|gb|EEJ69642.1| stage III sporulation protein J [Lactobacillus crispatus JV-V01] Length = 296 Score = 185 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 22/240 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ TV V+++ PL ST M++IQP+I Sbjct: 54 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTVIVRVILVPLNAISIRSTTKMQSIQPQI 113 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+L+Q+PV +A+Y I + ++ Sbjct: 114 NELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLPVMYALYGAILRTPQL 173 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F DL+ DP I + ++ + LS +I +P + Sbjct: 174 QTGRFLWM--DLSKPDPYYIMPILAMIFTF---------------LSTYISQLSTPKSSQ 216 Query: 514 KGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G ++ M ++ +F + + +YW SN+ +Q ++ + + Sbjct: 217 NGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQALQTFILQNPIKYRREQEAKAEA 276 >gi|326772847|ref|ZP_08232131.1| stage III sporulation protein J [Actinomyces viscosus C505] gi|326637479|gb|EGE38381.1| stage III sporulation protein J [Actinomyces viscosus C505] Length = 394 Score = 185 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 121/273 (44%), Gaps = 33/273 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +L+ + + ++I+ T+ V+LL PL KQ ++ M+ +QP++ Sbjct: 14 WVMVTIHKALVLIGFPDGPGVAWVLSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPEMQ 73 Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+ K+K Q + + M+ LY+ H NP+A C PIL+Q+P+FFA+++V++ + Sbjct: 74 ALQAKYKGKKDPESRQRMNEEMMALYRKHGTNPMASCLPILVQMPIFFALFRVLASLGAV 133 Query: 454 RHA----PFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIMSLSMF 502 P G + A+ ++FG + +IMS++ + Sbjct: 134 AAGKYGRPSIGPLTQQ-LAEQVQASSVFGASLSSSFLGSSDTQVKIVTVAMIVIMSVTQW 192 Query: 503 IQMKM------------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 M S P + Q M+L MPV+F + +F G+++YW SN+ ++ Sbjct: 193 YTMAQLSMKNMSTDSLNSDNPMIRSQRMMLYVMPVIFAVSGVNFQIGVLVYWVVSNLWTM 252 Query: 551 VQQAVIMKMH-----GAEIGLIDRLRSTFSKNY 578 QQ ++ AE R+ + ++ Sbjct: 253 GQQFFTIRNMPAPGSEAEKKYRARINAKRARKG 285 >gi|49480363|ref|YP_039040.1| OxaA-like protein precursor [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331919|gb|AAT62565.1| probable stage III sporulation protein J [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 260 Score = 185 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 124/238 (52%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 97 LQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 157 EEIRTST--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P + M MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 196 NSTPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 253 >gi|229175718|ref|ZP_04303224.1| Membrane protein oxaA 2 [Bacillus cereus MM3] gi|228607669|gb|EEK64985.1| Membrane protein oxaA 2 [Bacillus cereus MM3] Length = 260 Score = 185 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 71/238 (29%), Positives = 123/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 97 LQKLKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + + MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 196 NITPGEQVQMLKVQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMERE 253 >gi|327405480|ref|YP_004346318.1| Membrane protein oxaA [Fluviicola taffensis DSM 16823] gi|327320988|gb|AEA45480.1| Membrane protein oxaA [Fluviicola taffensis DSM 16823] Length = 649 Score = 185 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 103/557 (18%), Positives = 214/557 (38%), Gaps = 68/557 (12%) Query: 50 DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH-----LDVSSN 104 ++ + +S V L++ LI + KG + L+ + Sbjct: 88 GDTTIVPRVKVPTTVISKGEIVRLESEKLIVDFSTKGGVVSAVQLKEFESYMNFAKNDGK 147 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 + L + KN + + N + ++S + A Sbjct: 148 ITPLYLFKDGDQKNQ------LIFNIAGNKYATGNKEFEIVSKSK----HKVVFRHDVAE 197 Query: 165 NILFERTISLDEHYLFKIVDTVT--------NNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 T +L Y + N+ + + R R + + Sbjct: 198 G-SIIYTYNLKGGYDLGYTIQLKDLNGKVLPNSVMLDWQMEM-LRSERLLSEQRKVSTIC 255 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS-----KETSF 271 E L S V + Y E W+ Y++S+ K T F Sbjct: 256 YESADGKLDWNSEVAESYKTAE--------TDMKWVAYKQSYFSSILNADNGFKVKGTKF 307 Query: 272 HSQFKYLSDGHA-----RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 S +Y++K + ++ GK+ + + G ++ + Y +D Sbjct: 308 TSTNYKEGSKEFFTHIRKYRSKLNLGMQSVKDGKA---SFSWYFGPNDYHVLASYNQD-- 362 Query: 327 IPRFEMLIDWGWFYFIAKPMF---MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 ++ +++ GW F ++ + ++F NL N G+AI+L T+ +KL+ P+ K + Sbjct: 363 ---YDDILNLGWGVFRWINLYAVQPVFTFFMNLGINAGLAILLLTIILKLVLMPVQWKMF 419 Query: 384 VSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 VS+A MK ++P+ID++ K+ K+ Q M+ LY+ +PLAGC P+L Q+P+ A Sbjct: 420 VSSAKMKILKPQIDDINAKYPKKEDAMKKQMDMMALYRASGASPLAGCVPMLFQMPILLA 479 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +++ + ++R + W +DL++ D +I+ +P Y HV ++ ++M+ + Sbjct: 480 VFRFFPATFDLRQRG-FLWAEDLSSFD--SIWDFGTYIPLYG---NHVSLFTLLMAGTTL 533 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFAL-------SSFPAGLIIYWSWSNVISIVQQAV 555 + ++ + Q + M ++ +++ +GL Y+ S +++I+ V Sbjct: 534 LYTHLNSSNMTQQQQPGMPNMKIIMYMFPFMMIFFFNNYSSGLSYYYFISTLMTIILMFV 593 Query: 556 IMKMHGAEIGLIDRLRS 572 I K E L ++ Sbjct: 594 IKKFFVNEEKLKAKMAE 610 >gi|227550637|ref|ZP_03980686.1| stage III sporulation protein J precursor [Enterococcus faecium TX1330] gi|257888098|ref|ZP_05667751.1| inner membrane protein [Enterococcus faecium 1,141,733] gi|257896284|ref|ZP_05675937.1| inner membrane protein [Enterococcus faecium Com12] gi|257899268|ref|ZP_05678921.1| inner membrane protein [Enterococcus faecium Com15] gi|293379365|ref|ZP_06625509.1| putative stage III sporulation protein J [Enterococcus faecium PC4.1] gi|227180238|gb|EEI61210.1| stage III sporulation protein J precursor [Enterococcus faecium TX1330] gi|257824152|gb|EEV51084.1| inner membrane protein [Enterococcus faecium 1,141,733] gi|257832849|gb|EEV59270.1| inner membrane protein [Enterococcus faecium Com12] gi|257837180|gb|EEV62254.1| inner membrane protein [Enterococcus faecium Com15] gi|292641888|gb|EFF60054.1| putative stage III sporulation protein J [Enterococcus faecium PC4.1] Length = 272 Score = 185 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 23/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + GN GI I+L T+ ++++ PL Q S + +QPK+ Sbjct: 36 WDRYIVYYFAEAIKALS--FGNAGIGIILFTLIIRVILLPLMHFQTKSMRKTQELQPKLK 93 Query: 398 ELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++++ P+ L++ +LY + +NP AGC P+L+Q+P+ A+++ IS E++ Sbjct: 94 ALQQQYSSRDPETQSKLREEQQRLYAENGVNPYAGCLPLLVQMPILMALWQSISRVPELK 153 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 +L ADPT I + + + ++ MS ++ Sbjct: 154 QG--HFLWLNLGNADPTFILPILAAIFTFASTYL----------------SSMSQIESNA 195 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MPV+ + + +GL +YW SN +VQ +I + R Sbjct: 196 SMKIMNFVMPVMILVMGVNLASGLSLYWVVSNAFQVVQTLLINNPFKIRKEREEEARKIR 255 Query: 575 SKN 577 + Sbjct: 256 ERE 258 >gi|288555292|ref|YP_003427227.1| OxaA-like protein YidC [Bacillus pseudofirmus OF4] gi|298286838|sp|O87567|OXAA_BACPE RecName: Full=Membrane protein oxaA; Flags: Precursor gi|288546452|gb|ADC50335.1| OxaA-like protein YidC [Bacillus pseudofirmus OF4] Length = 252 Score = 185 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 62/225 (27%), Positives = 114/225 (50%), Gaps = 28/225 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +F P+ ++ +L+ G+FG++I++ T+ ++L PL KQ S+ M+ ++P++ Sbjct: 35 WNHFFVYPLSWVLISVADLLNGSFGLSIIVVTIGIRLFLLPLMIKQQKSSRAMQALRPEM 94 Query: 397 DELREKFKQ------SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + L++K+ Q Q +QK ++ LYK +NP+AGC P+ +Q+PV A Y I + Sbjct: 95 EALQKKYGQGTKRDPKDQQKMQKELMALYKDSGVNPMAGCLPLFIQLPVMMAFYFAIMRT 154 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + F + DL + DP I P++ ++ F+Q+KM+ Sbjct: 155 EVIALHSFLWF--DLGSPDPLYIL-------------------PVVAGITTFLQVKMTSF 193 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + +I+ MPV+ V A + P+ L +YW N+ I+Q Sbjct: 194 QLNDQMKVIIYIMPVMIVVAGVTLPSALSLYWVVGNLFMIIQTYF 238 >gi|293572715|ref|ZP_06683679.1| membrane protein OxaA 1 [Enterococcus faecium E980] gi|291607207|gb|EFF36565.1| membrane protein OxaA 1 [Enterococcus faecium E980] Length = 272 Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 23/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + GN GI I+L T+ ++++ PL Q S + +QPK+ Sbjct: 36 WDRYIVYYFAEAIKALS--FGNAGIGIILFTLIIRVILLPLMHFQTKSMRKTQELQPKLK 93 Query: 398 ELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++++ P+ L++ +LY + +NP AGC P+L+Q+P+ A+++ IS E++ Sbjct: 94 ALQQQYSSRDPETQSKLREEQQRLYAENGVNPYAGCLPLLVQMPILMALWQSISRVPELK 153 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 +L ADPT I + + + ++ MS ++ Sbjct: 154 QG--HFLWLNLGNADPTFILPILAAIFTFASTYL----------------SSMSQIESNA 195 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MPV+ + + +GL +YW SN +VQ +I + R Sbjct: 196 SMKIMNFVMPVMILVMGVNLASGLSLYWVVSNAFQVVQTLLINNPFKIRKEREEEARKIR 255 Query: 575 SKN 577 + Sbjct: 256 ERE 258 >gi|229094136|ref|ZP_04225216.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-42] gi|228689239|gb|EEL43060.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-42] Length = 262 Score = 185 bits (470), Expect = 2e-44, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 124/238 (52%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 99 LQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 159 EEIRTST--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P + M MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 198 NSTPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 255 >gi|296134496|ref|YP_003641743.1| membrane protein insertase, YidC/Oxa1 family [Thermincola sp. JR] gi|296033074|gb|ADG83842.1| membrane protein insertase, YidC/Oxa1 family [Thermincola potens JR] Length = 228 Score = 185 bits (470), Expect = 2e-44, Method: Composition-based stats. Identities = 72/224 (32%), Positives = 119/224 (53%), Gaps = 28/224 (12%) Query: 342 IAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + M L+ +FY L + N+G+AI+L TV +K+L PL KQ S + +QPK+ Sbjct: 4 LTAGMTALLEFFYKLTVSMGIPNYGLAIILITVLIKMLLLPLTIKQMKSLKMTQQLQPKV 63 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E++EK+K P+ Q+A+++LYK + NPL+GC P+LLQ+P+ A+Y+ + A Sbjct: 64 KEIQEKYKD--PKQAQQAIMELYKQYGANPLSGCLPLLLQMPIIIALYRALMKFPYTNEA 121 Query: 457 P-FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + WI +L+ D + PI+ L+ ++ +M+ D+ Sbjct: 122 HAKFLWISNLSQHDKIVL--------------------PILAVLTTYLLQRMTTNMQDQT 161 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q +L MP+ + SFPAGL +YW +N++ +QQ I KM Sbjct: 162 QKTMLIVMPLFIGWLSMSFPAGLALYWVVTNLVGAIQQYFINKM 205 >gi|282853036|ref|ZP_06262373.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes J139] gi|282582489|gb|EFB87869.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes J139] gi|314922673|gb|EFS86504.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL001PA1] gi|314965757|gb|EFT09856.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL082PA2] gi|314982899|gb|EFT26991.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL110PA3] gi|315091205|gb|EFT63181.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL110PA4] gi|315094439|gb|EFT66415.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL060PA1] gi|327328934|gb|EGE70694.1| membrane protein OxaA [Propionibacterium acnes HL103PA1] Length = 359 Score = 185 bits (470), Expect = 2e-44, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 24/238 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+++ P+F S ++ +AI+ T+F++LL PL KQ S +M+ IQPK+ Sbjct: 36 FHYLWSPLFGRDSGI-----SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKA 90 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------SISL 451 ++EK+ + Q M+ LY+ +NP A C P+LLQ+P+F A+++V+ Sbjct: 91 IQEKYGDDRERAGQ-EMMNLYREEGVNPAASCLPVLLQMPIFLALFRVLDGASRGIPRGH 149 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-IWPIIMSLSMFIQM----- 505 P A + F + G V + IIM ++F Sbjct: 150 FFAKNPGLMESLQHAKFFGAELAGRFLPMNNGFGGTQVVALVLIIIMVATLFYTQLQLMR 209 Query: 506 KMSPP-----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K PP P + Q M++ P++++F+ SFP G+++YW SN+ ++ QQ ++++ Sbjct: 210 KNMPPESLTGPMAQQQKMMIYLFPLMYLFSGVSFPIGVMLYWCTSNLWTLGQQEILIR 267 >gi|297627570|ref|YP_003689333.1| hypothetical protein PFREUD_24190 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923335|emb|CBL57936.1| Conserved membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 355 Score = 185 bits (470), Expect = 2e-44, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 123/247 (49%), Gaps = 26/247 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 Y+ + +L ++ N + +AI+L T F++LL PL KQ S+ M++I Sbjct: 18 LYWAVSGLIVLFHKLFSFFMNPDSGLTWTLAIVLLTCFIRLLMMPLYAKQLNSSRAMQSI 77 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK++EL++K+ + L + ++LY +NP + C P+L+Q+P+F+A+++V+S + Sbjct: 78 QPKVEELQKKYGSD-RERLGQETMKLYNEEGVNPASSCLPLLIQLPIFWALFRVLSSAAS 136 Query: 453 MRHAPFWG------WIKDLAAADPTNIFTLFGILPF---YLPGFMHVGIWPIIMSLSMFI 503 R+ + L+ AD P + I+M+ MF+ Sbjct: 137 DRNVHGYWLQRSPEITASLSHADLFGAKLSGTFWPLTGGFGATQGFALALAILMTGLMFV 196 Query: 504 QM-----KMSPP-----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 Q + PP P + Q M+L P++++F + P G+++YW +N+ ++ QQ Sbjct: 197 QQLHMLKRNMPPAAQTGPMAQQQKMMLYMFPLMYLFGGMAMPIGVLLYWLATNIWTMAQQ 256 Query: 554 AVIMKMH 560 VI++ + Sbjct: 257 YVIIRNY 263 >gi|289427470|ref|ZP_06429183.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes J165] gi|289159400|gb|EFD07591.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes J165] gi|313806852|gb|EFS45350.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL087PA2] gi|313817639|gb|EFS55353.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL046PA2] gi|313821536|gb|EFS59250.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL036PA1] gi|313824520|gb|EFS62234.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL036PA2] gi|313826189|gb|EFS63903.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL063PA1] gi|314926337|gb|EFS90168.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL036PA3] gi|314961659|gb|EFT05760.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL002PA2] gi|314980261|gb|EFT24355.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL072PA2] gi|314987116|gb|EFT31208.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL005PA2] gi|314990682|gb|EFT34773.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL005PA3] gi|315083075|gb|EFT55051.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL027PA2] gi|315086609|gb|EFT58585.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL002PA3] gi|315088011|gb|EFT59987.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL072PA1] gi|327333669|gb|EGE75386.1| membrane protein OxaA [Propionibacterium acnes HL096PA3] gi|327444473|gb|EGE91127.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL013PA2] gi|328757980|gb|EGF71596.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL020PA1] gi|332676743|gb|AEE73559.1| membrane protein OxaA [Propionibacterium acnes 266] Length = 359 Score = 185 bits (470), Expect = 2e-44, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 24/238 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+++ P+F S ++ +AI+ T+F++LL PL KQ S +M+ IQPK+ Sbjct: 36 FHYLWSPLFGRDSGI-----SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKA 90 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------SISL 451 ++EK+ + Q M+ LY+ +NP A C P+LLQ+P+F A+++V+ Sbjct: 91 IQEKYGDDRERAGQ-EMMNLYREEGVNPAASCLPVLLQMPIFLALFRVLDGVSRGIPRGH 149 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-IWPIIMSLSMFIQM----- 505 P A + F + G V + IIM ++F Sbjct: 150 FFAKNPGLMESLQHAKFFGAELAGRFLPMNNGFGGTQVVALVLIIIMVATLFYTQLQLMR 209 Query: 506 KMSPP-----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K PP P + Q M++ P++++F+ SFP G+++YW SN+ ++ QQ ++++ Sbjct: 210 KNMPPESLTGPMAQQQKMMIYLFPLMYLFSGVSFPIGVMLYWCTSNLWTLGQQEILIR 267 >gi|218900170|ref|YP_002448581.1| stage III sporulation protein J [Bacillus cereus G9842] gi|218542481|gb|ACK94875.1| stage III sporulation protein J [Bacillus cereus G9842] Length = 260 Score = 185 bits (470), Expect = 2e-44, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 97 LQKLKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 196 NITPGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|50843790|ref|YP_057017.1| putative inner membrane protein translocase component YidC [Propionibacterium acnes KPA171202] gi|289424430|ref|ZP_06426213.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes SK187] gi|295131878|ref|YP_003582541.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes SK137] gi|50841392|gb|AAT84059.1| conserved membrane protein [Propionibacterium acnes KPA171202] gi|289155127|gb|EFD03809.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes SK187] gi|291377350|gb|ADE01205.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes SK137] gi|313771070|gb|EFS37036.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL074PA1] gi|313792572|gb|EFS40658.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL110PA1] gi|313803573|gb|EFS44755.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL110PA2] gi|313811765|gb|EFS49479.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL083PA1] gi|313814225|gb|EFS51939.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL025PA1] gi|313815413|gb|EFS53127.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL059PA1] gi|313829185|gb|EFS66899.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL063PA2] gi|313832299|gb|EFS70013.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL007PA1] gi|313832759|gb|EFS70473.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL056PA1] gi|313839618|gb|EFS77332.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL086PA1] gi|314916209|gb|EFS80040.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL005PA4] gi|314917476|gb|EFS81307.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL050PA1] gi|314921812|gb|EFS85643.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL050PA3] gi|314930923|gb|EFS94754.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL067PA1] gi|314955281|gb|EFS99686.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL027PA1] gi|314959154|gb|EFT03256.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL002PA1] gi|314963877|gb|EFT07977.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL082PA1] gi|314969087|gb|EFT13185.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL037PA1] gi|314975194|gb|EFT19289.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL053PA1] gi|314977606|gb|EFT21701.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL045PA1] gi|314985207|gb|EFT29299.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL005PA1] gi|315078989|gb|EFT51001.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL053PA2] gi|315081501|gb|EFT53477.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL078PA1] gi|315097166|gb|EFT69142.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL038PA1] gi|315099346|gb|EFT71322.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL059PA2] gi|315102313|gb|EFT74289.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL046PA1] gi|315107502|gb|EFT79478.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL030PA1] gi|315109870|gb|EFT81846.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL030PA2] gi|327332496|gb|EGE74231.1| membrane protein OxaA [Propionibacterium acnes HL096PA2] gi|327446727|gb|EGE93381.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL043PA2] gi|327448831|gb|EGE95485.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL043PA1] gi|327454248|gb|EGF00903.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL087PA3] gi|327456308|gb|EGF02963.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL083PA2] gi|327457418|gb|EGF04073.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL092PA1] gi|328756006|gb|EGF69622.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL087PA1] gi|328758849|gb|EGF72465.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL025PA2] gi|328759807|gb|EGF73398.1| membrane protein OxaA [Propionibacterium acnes HL099PA1] Length = 359 Score = 185 bits (470), Expect = 2e-44, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 24/238 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+++ P+F S ++ +AI+ T+F++LL PL KQ S +M+ IQPK+ Sbjct: 36 FHYLWSPLFGRDSGI-----SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKA 90 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------SISL 451 ++EK+ + Q M+ LY+ +NP A C P+LLQ+P+F A+++V+ Sbjct: 91 IQEKYGDDRERAGQ-EMMNLYREEGVNPAASCLPVLLQMPIFLALFRVLDGASRGIPRGH 149 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-IWPIIMSLSMFIQM----- 505 P A + F + G V + IIM ++F Sbjct: 150 FFAKNPGLMESLQHAKFFGAELAGRFLPMNNGFGGTQVVALVLIIIMVATLFYTQLQLMR 209 Query: 506 KMSPP-----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K PP P + Q M++ P++++F+ SFP G+++YW SN+ ++ QQ ++++ Sbjct: 210 KNMPPESLTGPMAQQQKMMIYLFPLMYLFSGVSFPIGVMLYWCTSNLWTLGQQEILIR 267 >gi|126643001|ref|YP_001085985.1| hypothetical protein A1S_2980 [Acinetobacter baumannii ATCC 17978] gi|126388885|gb|ABO13383.1| hypothetical protein A1S_2980 [Acinetobacter baumannii ATCC 17978] Length = 164 Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats. Identities = 68/170 (40%), Positives = 102/170 (60%), Gaps = 20/170 (11%) Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ I P++ ++E+F + + Q M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ Sbjct: 1 MRVIAPEMQRMKEEFGEDRMRFSQ-EMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLM 59 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S+E+RHAP+ GWI+DL+A DP I P+IM +MF Q ++ Sbjct: 60 ESVELRHAPWLGWIQDLSAMDPWFIL-------------------PLIMGATMFAQQMLN 100 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P PAD QA + MP++F + FPAGL++YW +N I+I+QQ I K Sbjct: 101 PQPADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINK 150 >gi|196047512|ref|ZP_03114722.1| stage III sporulation protein J [Bacillus cereus 03BB108] gi|225867005|ref|YP_002752383.1| stage III sporulation protein J [Bacillus cereus 03BB102] gi|196021626|gb|EDX60323.1| stage III sporulation protein J [Bacillus cereus 03BB108] gi|225786361|gb|ACO26578.1| stage III sporulation protein J [Bacillus cereus 03BB102] Length = 260 Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 124/238 (52%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 97 LQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 157 EEIRTST--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P + M MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 196 NSTPVEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 253 >gi|227496609|ref|ZP_03926887.1| inner membrane protein translocase protein [Actinomyces urogenitalis DSM 15434] gi|226833889|gb|EEH66272.1| inner membrane protein translocase protein [Actinomyces urogenitalis DSM 15434] Length = 387 Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats. Identities = 70/283 (24%), Positives = 128/283 (45%), Gaps = 42/283 (14%) Query: 338 WFYFIAKPMFMLMSYFYN---LVG-------NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + + + +M Y + +G + ++I+ T+FV+LL PL KQ ++ Sbjct: 4 ILWPLKVAVAWVMVYIHKALVFIGLPDGPGVAWVLSIVGLTIFVRLLIMPLFVKQIRASR 63 Query: 388 NMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 M+ +QP++ L+ K+K + Q Q+ M+ LY+ H NP + C PIL+Q+PVFFA+ Sbjct: 64 GMQLMQPELQALQAKYKGKTDPASRQRQQEEMMALYRKHGTNPFSSCMPILVQMPVFFAL 123 Query: 444 YKVISISLEMRHAPF--WGWIKDLAA--ADPTNIFTLFG----------------ILPFY 483 ++V++ + + I L A A+ TLFG ++ Sbjct: 124 FRVLASLQAVATGTYANHDSIGPLTAQLAEDVQASTLFGAHLSESFMNSSDVTTKVVTVI 183 Query: 484 LPGFMHVGIWPIIMSLSMFIQ---MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + M V W + L+M K S P + Q M++ MP+ F F F G+++ Sbjct: 184 MIIAMSVSQWYTMAQLTMKNMPESSKNSDNPMMRSQRMMMTIMPIFFAFTGVQFQIGVLV 243 Query: 541 YWSWSNVISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNY 578 YW +N+ ++ QQ + ++ AE R+ + ++ Sbjct: 244 YWVTTNLWTMGQQFLTIRNMPAPGSEAEKKYRARVNAKRARKG 286 >gi|253582576|ref|ZP_04859797.1| inner membrane protein oxaA [Fusobacterium varium ATCC 27725] gi|251835446|gb|EES63986.1| inner membrane protein oxaA [Fusobacterium varium ATCC 27725] Length = 205 Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats. Identities = 64/224 (28%), Positives = 117/224 (52%), Gaps = 25/224 (11%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G I + M + + +NL GNFG+AI+ T+ +K++ PL KQ S +MK +QP+ Sbjct: 5 YGLLKGIIESM---LVFMHNLTGNFGLAIIGVTILMKIILLPLTLKQDKSMKSMKKLQPE 61 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 +D+++E++K ++L + ++LY+ H +NP GC P+L+Q+P+ +A++ V+ + + Sbjct: 62 LDKIKEQYKGDS-KMLNQKTMELYQKHKVNPAGGCLPLLVQLPILWALFGVLRGGIVPQD 120 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + F L DP I P++ + F+Q K+ + Sbjct: 121 STFLWM--QLVQPDPYYIL-------------------PVLNGVVSFVQQKVMGSSDNPQ 159 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ P++ VF PAGL IYW S++ ++QQ +IMK Sbjct: 160 MKNMMYMFPIMMVFISYKMPAGLQIYWLTSSLAGVIQQYLIMKK 203 >gi|282848769|ref|ZP_06258164.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula ATCC 17745] gi|294792401|ref|ZP_06757548.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp. 6_1_27] gi|294794207|ref|ZP_06759343.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp. 3_1_44] gi|282581555|gb|EFB86943.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula ATCC 17745] gi|294454537|gb|EFG22910.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp. 3_1_44] gi|294456300|gb|EFG24663.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp. 6_1_27] Length = 221 Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats. Identities = 73/236 (30%), Positives = 117/236 (49%), Gaps = 29/236 (12%) Query: 337 GWFYFIAKPMFMLMSYFYNLV-----GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 G F I M L++Y + L ++G+AI+L T+ +K + PL KQ S M+ Sbjct: 6 GIFQPIVDLMSTLVTYAFQLTQMIGYPSYGVAIILLTIVIKAILAPLTVKQIKSMKAMQE 65 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ +L++K+K P + LQ M LYK +NPLAGC P+L+Q+P AIY + Sbjct: 66 LQPRMKQLQDKYKNDPAK-LQAEMGALYKEMGVNPLAGCLPLLVQMPFLIAIYWALKDYP 124 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP- 510 + + W+ L DP I PI+ +LS ++ + + Sbjct: 125 YDPNFVQFLWLPSLGDPDPMYIL-------------------PILSALSTWVMSRQTSNG 165 Query: 511 ---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 A + Q ++ +MP+ + SFP+GL+IYW SNV ++QQ I K A+ Sbjct: 166 ATGAAAQQQKIMTIFMPLFIGYISLSFPSGLVIYWVVSNVFQLIQQHFIYKNLNAK 221 >gi|256843834|ref|ZP_05549321.1| stage III sporulation protein J [Lactobacillus crispatus 125-2-CHN] gi|256849611|ref|ZP_05555043.1| stage III sporulation protein J [Lactobacillus crispatus MV-1A-US] gi|262046279|ref|ZP_06019242.1| stage III sporulation protein J [Lactobacillus crispatus MV-3A-US] gi|295693884|ref|YP_003602494.1| stage iii sporulation protein j [Lactobacillus crispatus ST1] gi|312984010|ref|ZP_07791358.1| membrane protein OxaA [Lactobacillus crispatus CTV-05] gi|256613739|gb|EEU18941.1| stage III sporulation protein J [Lactobacillus crispatus 125-2-CHN] gi|256713727|gb|EEU28716.1| stage III sporulation protein J [Lactobacillus crispatus MV-1A-US] gi|260573609|gb|EEX30166.1| stage III sporulation protein J [Lactobacillus crispatus MV-3A-US] gi|295031990|emb|CBL51469.1| Stage III sporulation protein J [Lactobacillus crispatus ST1] gi|310894512|gb|EFQ43586.1| membrane protein OxaA [Lactobacillus crispatus CTV-05] Length = 291 Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 22/240 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ TV V+++ PL ST M++IQP+I Sbjct: 49 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTVIVRVILVPLNAISIRSTTKMQSIQPQI 108 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+L+Q+PV +A+Y I + ++ Sbjct: 109 NELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLPVMYALYGAILRTPQL 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F DL+ DP I + ++ + LS +I +P + Sbjct: 169 QTGRFLWM--DLSKPDPYYIMPILAMIFTF---------------LSTYISQLSTPKSSQ 211 Query: 514 KGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G ++ M ++ +F + + +YW SN+ +Q ++ + + Sbjct: 212 NGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQALQTFILQNPIKYRREQEAKAEA 271 >gi|42784207|ref|NP_981454.1| OxaA-like protein precursor [Bacillus cereus ATCC 10987] gi|42740138|gb|AAS44062.1| stage III sporulation protein J [Bacillus cereus ATCC 10987] Length = 260 Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats. Identities = 71/238 (29%), Positives = 121/238 (50%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 97 LQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ + M MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 196 NITAGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMERE 253 >gi|229062687|ref|ZP_04199996.1| Membrane protein oxaA 2 [Bacillus cereus AH603] gi|228716657|gb|EEL68354.1| Membrane protein oxaA 2 [Bacillus cereus AH603] Length = 260 Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats. Identities = 71/238 (29%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WNHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 97 LQKLKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P + + MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 196 NVTPGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRVMERE 253 >gi|269798910|ref|YP_003312810.1| hypothetical protein Vpar_1856 [Veillonella parvula DSM 2008] gi|269095539|gb|ACZ25530.1| 60 kDa inner membrane insertion protein [Veillonella parvula DSM 2008] Length = 221 Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats. Identities = 73/236 (30%), Positives = 117/236 (49%), Gaps = 29/236 (12%) Query: 337 GWFYFIAKPMFMLMSYFYNLV-----GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 G F I M L++Y + L ++G+AI+L T+ +K + PL KQ S M+ Sbjct: 6 GIFQPIVDLMSTLVTYAFQLTQMIGYPSYGVAIILLTIVIKAILAPLTVKQIKSMKAMQE 65 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ +L++K+K P + LQ M LYK +NPLAGC P+L+Q+P AIY + Sbjct: 66 LQPRMKQLQDKYKNDPAK-LQAEMGALYKEMGVNPLAGCLPLLVQMPFLIAIYWALKDYP 124 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP- 510 + + W+ L DP I PI+ +LS ++ + + Sbjct: 125 YDPNFVQFLWLPSLGDPDPMYIL-------------------PILSALSTWVMSRQTSSG 165 Query: 511 ---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 A + Q ++ +MP+ + SFP+GL+IYW SNV ++QQ I K A+ Sbjct: 166 ATGAAAQQQKIMTIFMPLFIGYISLSFPSGLVIYWVVSNVFQLIQQHFIYKNLNAK 221 >gi|269122721|ref|YP_003310898.1| hypothetical protein Sterm_4135 [Sebaldella termitidis ATCC 33386] gi|268616599|gb|ACZ10967.1| 60 kDa inner membrane insertion protein [Sebaldella termitidis ATCC 33386] Length = 219 Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 117/212 (55%), Gaps = 12/212 (5%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + GN+GI I+L TV ++++ PL KQ S M++IQP++D+LREK+K +P Q Sbjct: 14 LKKLSEFTGNYGIGIILLTVLIRVIILPLTIKQEKSMKKMRDIQPEVDKLREKYKDNP-Q 72 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 +Q M ++YK + +NP+AGC P+ +Q+ +F +++V++ + + + + W +L D Sbjct: 73 EMQIKMQEIYKKNQVNPMAGCLPLFVQMCIFITLFRVLNDANSIPNDATFLWF-NLKQPD 131 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQAMILNWMPVV 526 G+ F + I+P++ ++ F Q KM +L +P+V Sbjct: 132 ALVKLPFTGM-------FSAINIFPLLNTVVTFFQQKMMSTGTQDSNPQMKTMLYTLPLV 184 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + + P+G+ +YW S++++++QQ IMK Sbjct: 185 ILVMTYNMPSGVSLYWFTSSLLAVIQQFFIMK 216 >gi|302836307|ref|XP_002949714.1| inner membrane ALBINO3-like protein 2, chloroplast precursor [Volvox carteri f. nagariensis] gi|300265073|gb|EFJ49266.1| inner membrane ALBINO3-like protein 2, chloroplast precursor [Volvox carteri f. nagariensis] Length = 413 Score = 184 bits (468), Expect = 3e-44, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 124/264 (46%), Gaps = 26/264 (9%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVST 386 L D G +A+ ++ + + N +G AI+ TV VKL FPL +KQ ST Sbjct: 72 LADGGPIDLLAQFFTSVLRTLDDGLENAHVPYSYGFAIITLTVLVKLATFPLTQKQVEST 131 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 +++ +QP++ EL+ K P + LQ ++YK +NPLAGC P L IPVF +Y Sbjct: 132 LSLQALQPRVKELQAKHADDP-ETLQLETARMYKEAGVNPLAGCLPTLATIPVFIGLYNA 190 Query: 447 ISISL-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--------WPIIM 497 +S + + WI L+ PT I L + G VG P+++ Sbjct: 191 LSNAAKAGLLTEGFFWIPSLSG--PTTIGGGLEWLFPFQDGAPPVGWANAAAYLVMPVLL 248 Query: 498 SLSMFIQMKM------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 S + K+ S PA + IL ++P++ + + P+GL +YW +N++S Sbjct: 249 VASQYASQKIISTTQNSNDPAQQQSQAILKFLPLMIGWFSLNVPSGLTLYWFVNNLLSTA 308 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFS 575 QQ + ++ + + +++ + Sbjct: 309 QQLYL--KATVKVNVPESIKAPVA 330 >gi|228968133|ref|ZP_04129137.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|228791568|gb|EEM39166.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar sotto str. T04001] Length = 262 Score = 184 bits (468), Expect = 3e-44, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 99 LQKLKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 159 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 198 NITPGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 255 >gi|75764154|ref|ZP_00743733.1| 60 kDa inner membrane protein YIDC [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228903521|ref|ZP_04067644.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 4222] gi|74488358|gb|EAO51995.1| 60 kDa inner membrane protein YIDC [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228856097|gb|EEN00634.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 4222] Length = 260 Score = 184 bits (468), Expect = 3e-44, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 97 LQKLKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 196 NITPGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|118480108|ref|YP_897259.1| OxaA-like protein precursor [Bacillus thuringiensis str. Al Hakam] gi|229187267|ref|ZP_04314412.1| Membrane protein oxaA 2 [Bacillus cereus BGSC 6E1] gi|118419333|gb|ABK87752.1| stage III sporulation protein J [Bacillus thuringiensis str. Al Hakam] gi|228596277|gb|EEK53952.1| Membrane protein oxaA 2 [Bacillus cereus BGSC 6E1] Length = 262 Score = 184 bits (468), Expect = 3e-44, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 124/238 (52%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 99 LQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 159 EEIRTST--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P + M MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 198 NSTPVEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 255 >gi|314929150|gb|EFS92981.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL044PA1] gi|328905781|gb|EGG25557.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium sp. P08] Length = 359 Score = 184 bits (468), Expect = 3e-44, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 116/238 (48%), Gaps = 24/238 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+++ P+F S ++ +AI+ T+F++LL PL KQ S +M+ IQPK+ Sbjct: 36 FHYLWSPLFGRDSGI-----SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKA 90 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------SISL 451 ++EK+ + Q M+ LY+ +NP A C P+LLQ+P+F A+++V+ Sbjct: 91 IQEKYGDDRERAGQ-EMMNLYREEGVNPAASCLPVLLQMPIFLALFRVLDGASRGIPRGH 149 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-IWPIIMSLSMFIQM----- 505 P A + F + G V + ++M ++F Sbjct: 150 FFAENPKLMESLQHAKFFGAELAGRFLPMNNGFGGTQVVALVLIVVMVATLFYTQLQLMR 209 Query: 506 KMSPP-----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K PP P + Q M++ P++++F+ SFP G+++YW SN+ ++ QQ ++++ Sbjct: 210 KNMPPESLTGPMAQQQKMMIYLFPLMYLFSGVSFPIGVMLYWCTSNLWTLGQQEILIR 267 >gi|323141441|ref|ZP_08076331.1| stage III sporulation protein J [Phascolarctobacterium sp. YIT 12067] gi|322414097|gb|EFY04926.1| stage III sporulation protein J [Phascolarctobacterium sp. YIT 12067] Length = 214 Score = 184 bits (467), Expect = 3e-44, Method: Composition-based stats. Identities = 72/228 (31%), Positives = 120/228 (52%), Gaps = 30/228 (13%) Query: 341 FIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 F+A + +++ YN + N G+AI+L T+ +KL+ +PL +KQ ST M IQPK Sbjct: 3 FLANIVQQVLTVLYNFTESVGIPNLGLAIVLMTIIIKLIMYPLTQKQIQSTKAMMEIQPK 62 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + L+EK+K Q L + LYK+ +NPLAGC P+L+Q+P+ I+ I H Sbjct: 63 MKALQEKYKDDK-QRLNMELANLYKSEGVNPLAGCLPLLIQMPIMIGIFYGIRDYNYAAH 121 Query: 456 ---APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511 + W+ D++ ADPT + P++ +L+ FIQ K + P Sbjct: 122 PEIVTSFLWLADISKADPTYVL-------------------PVLSALTTFIQTKQTMPAN 162 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M++ +MP+ + +FPAGL++YW N++ I QQ+++ + Sbjct: 163 GGGAQNKMMMYFMPLFIGYISLTFPAGLVLYWVVMNIMQIAQQSIMNR 210 >gi|312136222|ref|YP_004003560.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor owensensis OL] gi|311776273|gb|ADQ05760.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor owensensis OL] Length = 341 Score = 184 bits (467), Expect = 3e-44, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 34/251 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WF F+A P+ L+ Y+ + G++GIA++L T+ V+ L PL KQ S + M Sbjct: 5 WFDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIHSMSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P++ E+++K+K + LQ+ M++LY+ NP AGCWP+L+Q+P+ F++Y V L Sbjct: 65 VAPRLQEIQQKYKND-QKKLQEEMLKLYQETGYNPAAGCWPLLIQMPILFSLYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDLAAA-----------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 ++KDL D L + + PI+ + + Sbjct: 124 VYVLGKSHQYVKDLVTGATGYAITQRIVDEAQKLGLDMHFLGINLAKKELLVLPILSAAT 183 Query: 501 MFI--------QMKMSPPPADKGQAMI--------LNWMPVVFVFALSSFPAGLIIYWSW 544 M + Q K +P + + + + P++ F P+GL++YW+ Sbjct: 184 MLLSVWFSSNSQKKFNPQYSQSQSNAMAESINKSFMIFSPLMSYFIALQVPSGLVLYWTV 243 Query: 545 SNVISIVQQAV 555 +N+ +I+QQ + Sbjct: 244 TNLFTILQQFI 254 >gi|302801394|ref|XP_002982453.1| hypothetical protein SELMODRAFT_12955 [Selaginella moellendorffii] gi|300149552|gb|EFJ16206.1| hypothetical protein SELMODRAFT_12955 [Selaginella moellendorffii] Length = 306 Score = 184 bits (467), Expect = 4e-44, Method: Composition-based stats. Identities = 74/249 (29%), Positives = 124/249 (49%), Gaps = 23/249 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WF + M ++ + + +G AI+L TV VK+L FPL K Q ST +M+N Sbjct: 37 WFSGVTTVMEAVLKVLKDGLTTLKVPYAYGFAIILLTVLVKVLTFPLTKSQAESTISMQN 96 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QPK+ +++++ + +Q +LYK +NPLAGC P L +PV+ +Y+ +S Sbjct: 97 LQPKLKAIQQRYAGD-QERIQMETARLYKQAGVNPLAGCLPTLATLPVWIGLYRALSNVA 155 Query: 452 -EMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPIIMSL 499 E + + WI LA + I LF G P + + P+++ Sbjct: 156 NEGLLSEGFFWIPSLAGPTTIAARQSGSGISWLFPFVDGHPPLGWGDTIAYLVLPVLLIG 215 Query: 500 SMFIQMK-MSPPPADKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 S + M+ M PP D Q +IL ++P++ + S P+GL +YW +N++S QQ Sbjct: 216 SQYASMQIMQPPQTDPSQKNTQLILKFLPLMIGYFALSVPSGLSLYWLTNNILSTGQQVW 275 Query: 556 IMKMHGAEI 564 + K+ GA+ Sbjct: 276 LRKLGGAKP 284 >gi|229014209|ref|ZP_04171330.1| Membrane protein oxaA 2 [Bacillus mycoides DSM 2048] gi|229169740|ref|ZP_04297440.1| Membrane protein oxaA 2 [Bacillus cereus AH621] gi|228613779|gb|EEK70904.1| Membrane protein oxaA 2 [Bacillus cereus AH621] gi|228747163|gb|EEL97045.1| Membrane protein oxaA 2 [Bacillus mycoides DSM 2048] Length = 260 Score = 184 bits (467), Expect = 4e-44, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WNHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 97 LQKLKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 196 NVTPGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMERE 253 >gi|312794741|ref|YP_004027664.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181881|gb|ADQ42051.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor kristjanssonii 177R1B] Length = 341 Score = 184 bits (467), Expect = 4e-44, Method: Composition-based stats. Identities = 69/251 (27%), Positives = 117/251 (46%), Gaps = 34/251 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W F+A P+ L+ + Y+ + G++GIA++L T+ V+ L PL KQ ST+ M Sbjct: 5 WLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P++ E+++K+K + +Q+ M++LY+ NP GCWP+L+Q P+ FA+Y V L Sbjct: 65 VAPRLQEIQQKYKND-QRKMQEEMLKLYQETGYNPAGGCWPLLIQAPILFALYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDLAAADPTNIFT---------------LFGI---------LPFYLPGF 487 +++DL T FGI LP F Sbjct: 124 VYVLGKSHQYVRDLITGATGYAITQRIVDEAQKLGLDMHFFGINLAQKELIVLPILSAAF 183 Query: 488 MHVGIWPIIMSLSMF---IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 + I + S F S A+ ++ + P++ F P+GL++YW+ Sbjct: 184 SFLSILYSMNSQKKFNPQYSQSQSNAMAESMNRSLMIFSPLMSYFIALQVPSGLVLYWTV 243 Query: 545 SNVISIVQQAV 555 SN+ I+QQ + Sbjct: 244 SNLFQILQQFI 254 >gi|313835175|gb|EFS72889.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL037PA2] gi|314970899|gb|EFT14997.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL037PA3] Length = 359 Score = 184 bits (467), Expect = 4e-44, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 116/238 (48%), Gaps = 24/238 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+++ P+F S ++ +AI+ T+F++LL PL KQ S +M+ IQPK+ Sbjct: 36 FHYLWSPLFGRDSGI-----SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKA 90 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------SISL 451 ++EK+ + Q M+ LY+ +NP A C P+LLQ+P+F A+++V+ Sbjct: 91 IQEKYGDDRERAGQ-EMMNLYREEGVNPAASCLPVLLQMPIFLALFRVLDGASRGIPRGH 149 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-IWPIIMSLSMFIQM----- 505 P A + F + G V + ++M ++F Sbjct: 150 FFAENPKLMESLQHAKFFGAELAGRFLPMNNGFGGTQVVALVLIVVMVATLFYTQLQLMR 209 Query: 506 KMSPP-----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K PP P + Q M++ P++++F+ SFP G+++YW SN+ ++ QQ ++++ Sbjct: 210 KNMPPESLTGPMAQQQKMMIYLFPLMYLFSGVSFPIGVMLYWCTSNLWTLGQQEILIR 267 >gi|313765030|gb|EFS36394.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL013PA1] Length = 359 Score = 184 bits (467), Expect = 4e-44, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 24/238 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+++ P+F S ++ +AI+ T+F++LL PL KQ S +M+ IQPK+ Sbjct: 36 FHYLWSPLFGRDSGI-----SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKA 90 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------SISL 451 ++EK+ + Q M+ LY+ +NP A C P+LLQ+P+F A+++V+ Sbjct: 91 IQEKYGDDRERAGQ-EMMNLYRDEGVNPAASCLPVLLQMPIFLALFRVLDGASRGIPRGH 149 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-IWPIIMSLSMFIQM----- 505 P A + F + G V + IIM ++F Sbjct: 150 FFAKNPGLMESLQHAKFFGAELAGRFLPMNNGFGGTQVVALVLIIIMVATLFYTQLQLMR 209 Query: 506 KMSPP-----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K PP P + Q M++ P++++F+ SFP G+++YW SN+ ++ QQ ++++ Sbjct: 210 KNMPPESLTGPMAQQQKMMIYLFPLMYLFSGVSFPIGVMLYWCTSNLWTLGQQEILIR 267 >gi|222530703|ref|YP_002574585.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor bescii DSM 6725] gi|222457550|gb|ACM61812.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor bescii DSM 6725] Length = 341 Score = 184 bits (467), Expect = 4e-44, Method: Composition-based stats. Identities = 70/251 (27%), Positives = 118/251 (47%), Gaps = 34/251 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W F+A P+ L+ + Y+ + G++GIAI+L T+ V+ L PL KQ ST+ M Sbjct: 5 WLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAIILLTLIVRGLLLPLYIKQIQSTSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P++ E+++K+K + +Q+ M++LY+ NP GCWP+L+QIP+ F++Y V L Sbjct: 65 VAPRLQEIQQKYKND-QKKMQEEMLKLYQETGYNPAGGCWPLLIQIPILFSLYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDLAAADPTNIFT---------------LFGI---------LPFYLPGF 487 ++KDL T FGI LP F Sbjct: 124 VYVLGKSHQYVKDLITGATGYNITQRIVNEAQKLGLDMHFFGINLAQKELIVLPILSAVF 183 Query: 488 MHVGIWPIIMSLSMF---IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 + I + S F + A+ ++ + P++ F P+GL++YW+ Sbjct: 184 SFLSILYSMNSQKKFNPQYSSSQTNAMAEGMNRSLMIFSPLMSYFIALQVPSGLVLYWTV 243 Query: 545 SNVISIVQQAV 555 SN+ I+QQ + Sbjct: 244 SNLFQILQQFI 254 >gi|327334553|gb|EGE76264.1| membrane protein OxaA [Propionibacterium acnes HL097PA1] Length = 359 Score = 184 bits (467), Expect = 4e-44, Method: Composition-based stats. Identities = 66/238 (27%), Positives = 117/238 (49%), Gaps = 24/238 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+++ P+F S ++ +AI+ T+F++LL PL KQ S +M+ IQPK+ Sbjct: 36 FHYLWSPLFGRDSGI-----SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKA 90 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------SISL 451 ++EK+ + Q M+ LY+ +NP A C P+LLQ+P+F A+++V+ Sbjct: 91 IQEKYGDDRERAGQ-EMMNLYREEGVNPAASCLPVLLQMPIFLALFRVLDGASRGIPRGH 149 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-IWPIIMSLSMFIQM----- 505 P A + F + G V + IIM ++F Sbjct: 150 FFAKNPGLMESLQHAKFFGAELAGRFLPMNNGFGGTQVVALVLIIIMVATLFYTQLQLMR 209 Query: 506 KMSPP-----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K PP P + Q M++ P++++F+ SFP G+++YWS SN+ ++ QQ ++++ Sbjct: 210 KNMPPESLTGPMAQQQKMMIYLFPLMYLFSGVSFPIGVMLYWSTSNLWTLGQQEILIR 267 >gi|163942740|ref|YP_001647624.1| OxaA-like protein precursor [Bacillus weihenstephanensis KBAB4] gi|163864937|gb|ABY45996.1| 60 kDa inner membrane insertion protein [Bacillus weihenstephanensis KBAB4] Length = 260 Score = 184 bits (467), Expect = 4e-44, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WNHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 97 LQKLKQKYGDVGKNLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 196 NVTPGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMERE 253 >gi|30265065|ref|NP_847442.1| OxaA-like protein precursor [Bacillus anthracis str. Ames] gi|47530571|ref|YP_021920.1| OxaA-like protein precursor [Bacillus anthracis str. 'Ames Ancestor'] gi|49187877|ref|YP_031130.1| OxaA-like protein precursor [Bacillus anthracis str. Sterne] gi|165870877|ref|ZP_02215529.1| stage III sporulation protein J [Bacillus anthracis str. A0488] gi|167634953|ref|ZP_02393271.1| stage III sporulation protein J [Bacillus anthracis str. A0442] gi|167639999|ref|ZP_02398267.1| stage III sporulation protein J [Bacillus anthracis str. A0193] gi|170685875|ref|ZP_02877098.1| stage III sporulation protein J [Bacillus anthracis str. A0465] gi|170707039|ref|ZP_02897496.1| stage III sporulation protein J [Bacillus anthracis str. A0389] gi|177652211|ref|ZP_02934714.1| stage III sporulation protein J [Bacillus anthracis str. A0174] gi|190567249|ref|ZP_03020164.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I] gi|196032983|ref|ZP_03100396.1| stage III sporulation protein J [Bacillus cereus W] gi|218906219|ref|YP_002454053.1| stage III sporulation protein J [Bacillus cereus AH820] gi|227817795|ref|YP_002817804.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684] gi|229601480|ref|YP_002869262.1| stage III sporulation protein J [Bacillus anthracis str. A0248] gi|254687356|ref|ZP_05151213.1| OxaA-like protein precursor [Bacillus anthracis str. CNEVA-9066] gi|254725369|ref|ZP_05187152.1| OxaA-like protein precursor [Bacillus anthracis str. A1055] gi|254733735|ref|ZP_05191451.1| OxaA-like protein precursor [Bacillus anthracis str. Western North America USA6153] gi|254740573|ref|ZP_05198264.1| OxaA-like protein precursor [Bacillus anthracis str. Kruger B] gi|254753165|ref|ZP_05205201.1| OxaA-like protein precursor [Bacillus anthracis str. Vollum] gi|254761508|ref|ZP_05213529.1| OxaA-like protein precursor [Bacillus anthracis str. Australia 94] gi|38502946|sp|Q81XH4|OXAA2_BACAN RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|30259742|gb|AAP28928.1| stage III sporulation protein J [Bacillus anthracis str. Ames] gi|47505719|gb|AAT34395.1| stage III sporulation protein J [Bacillus anthracis str. 'Ames Ancestor'] gi|49181804|gb|AAT57180.1| stage III sporulation protein J [Bacillus anthracis str. Sterne] gi|164713386|gb|EDR18911.1| stage III sporulation protein J [Bacillus anthracis str. A0488] gi|167512080|gb|EDR87458.1| stage III sporulation protein J [Bacillus anthracis str. A0193] gi|167529703|gb|EDR92452.1| stage III sporulation protein J [Bacillus anthracis str. A0442] gi|170128142|gb|EDS97012.1| stage III sporulation protein J [Bacillus anthracis str. A0389] gi|170670339|gb|EDT21079.1| stage III sporulation protein J [Bacillus anthracis str. A0465] gi|172082217|gb|EDT67283.1| stage III sporulation protein J [Bacillus anthracis str. A0174] gi|190561753|gb|EDV15723.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I] gi|195994412|gb|EDX58367.1| stage III sporulation protein J [Bacillus cereus W] gi|218540128|gb|ACK92526.1| stage III sporulation protein J [Bacillus cereus AH820] gi|227006381|gb|ACP16124.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684] gi|229265888|gb|ACQ47525.1| stage III sporulation protein J [Bacillus anthracis str. A0248] Length = 260 Score = 184 bits (467), Expect = 4e-44, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 123/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 97 LQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 157 EEIRTST--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + M MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 196 NSTSGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 253 >gi|312623586|ref|YP_004025199.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor kronotskyensis 2002] gi|312204053|gb|ADQ47380.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor kronotskyensis 2002] Length = 341 Score = 184 bits (466), Expect = 4e-44, Method: Composition-based stats. Identities = 70/251 (27%), Positives = 118/251 (47%), Gaps = 34/251 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W F+A P+ L+ + Y+ + G++GIAI+L T+ V+ L PL KQ ST+ M Sbjct: 5 WLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAIILLTLIVRGLLLPLYIKQIQSTSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P++ E+++K+K + +Q+ M++LY+ NP GCWP+L+QIP+ F++Y V L Sbjct: 65 VAPRLQEIQQKYKND-QKKMQEEMLKLYQETGYNPAGGCWPLLIQIPILFSLYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDLAAADPTNIFT---------------LFGI---------LPFYLPGF 487 ++KDL T FGI LP F Sbjct: 124 VYVLGKSHQYVKDLITGATGYNITQRIVNEAQKLGLDMHFFGINLAQKELIVLPILSAVF 183 Query: 488 MHVGIWPIIMSLSMF---IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 + I + S F + A+ ++ + P++ F P+GL++YW+ Sbjct: 184 SFLSILYSMNSQKKFNPQYSSSQTNAMAEGMNRSLMIFSPLMSYFIALQVPSGLVLYWTV 243 Query: 545 SNVISIVQQAV 555 SN+ I+QQ + Sbjct: 244 SNLFQILQQFI 254 >gi|299541768|ref|ZP_07052091.1| membrane protein oxaA 1 precursor [Lysinibacillus fusiformis ZC1] gi|298725506|gb|EFI66147.1| membrane protein oxaA 1 precursor [Lysinibacillus fusiformis ZC1] Length = 256 Score = 184 bits (466), Expect = 4e-44, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 100/224 (44%), Gaps = 23/224 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W FI P+ + YF +L+G + I+ T+ ++L PL KQ S+ M+ IQPK+ Sbjct: 36 WNEFIVWPLVSAIKYFADLLGTYAWGIIAVTIIIRLAILPLMIKQTKSSKKMQEIQPKLK 95 Query: 398 ELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 EL++K+ Q Q+ M++L +NPLAGC P+++Q+P+ Y IS Sbjct: 96 ELQKKYASKDAQTQQQYQQEMMKLMSESGVNPLAGCLPVIIQMPILIGFYHAISRMN--- 152 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 A T F I P P I L FI ++ P + Sbjct: 153 -------------ATSTFDLGNFFIFPLADPA----PALAITAGLMQFIVLRTGPAMDNP 195 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +++ MP + + + PA L +YW N+ISI Q I K Sbjct: 196 QMKIMMYIMPFMIIGFGMALPAALSLYWVIGNIISIFQNLYIYK 239 >gi|304385852|ref|ZP_07368196.1| stage III sporulation protein J [Pediococcus acidilactici DSM 20284] gi|304328356|gb|EFL95578.1| stage III sporulation protein J [Pediococcus acidilactici DSM 20284] Length = 279 Score = 184 bits (466), Expect = 5e-44, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 22/249 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W I + Y + GN +G I++ TV ++++ PL Q ++ +QPK+ Sbjct: 36 WDGVIVYNFSKFIIYLSKICGNNYGWGIIVFTVLIRIIILPLMIYQTKTSMKTAELQPKL 95 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ Q L++ +LY +NP+AGC P+++Q+PV +A+Y +S + + Sbjct: 96 KELQQKYSSRDVETQQKLREEQQKLYAEAGVNPMAGCLPLIIQLPVMYALYAAVSRTQVL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L DP I + + + LS ++ MK P A Sbjct: 156 KEGTFLWL--QLNDKDPYYILPILAAIFTF---------------LSTWLSMKAQPAGAQ 198 Query: 514 KGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G + + MP++ + +FPA + +YW +N+ + Q VI + +L++ Sbjct: 199 NGMTSAMTFGMPLIILITALNFPAAITLYWVVTNLFQVGQTLVIQNPFKIQKERQAKLQA 258 Query: 573 TFSKNYNSQ 581 +K + Sbjct: 259 EKAKRKAIE 267 >gi|229135853|ref|ZP_04264621.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST196] gi|228647593|gb|EEL03660.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST196] Length = 262 Score = 184 bits (466), Expect = 5e-44, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WNHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 99 LQKLKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 159 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 198 NVTPGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMERE 255 >gi|150392475|ref|YP_001322524.1| 60 kDa inner membrane insertion protein [Alkaliphilus metalliredigens QYMF] gi|149952337|gb|ABR50865.1| 60 kDa inner membrane insertion protein [Alkaliphilus metalliredigens QYMF] Length = 220 Score = 184 bits (466), Expect = 5e-44, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 14/224 (6%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F A+P+ L+ ++L+GN+G++I++ T+ VKLL PL KQ S M+ +QP+I +L+ Sbjct: 3 FFAQPLGALLKLIFDLIGNYGVSIIVFTILVKLLLLPLTLKQTRSMRQMQEVQPEIKKLQ 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K Q L +++Y +N++P GC P+L+Q P+ ++ + Sbjct: 63 EKYKNDKEQ-LNAKTMEIYAKYNVSPFGGCLPLLVQFPILIGLFTALRDPATYVFGSAEI 121 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAM 518 + +I T F L V P++ ++ F+ K AD+ Q M Sbjct: 122 Y---------ASINTSFLWLSNLSDADPWV--LPLLAGITTFLSSKTMSTGKQADQTQKM 170 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + MP++ + SFPAGL +YW SN+ VQQ ++ + Sbjct: 171 MTYGMPLMIFWWGRSFPAGLTLYWVVSNLFQFVQQLLMNRSQDK 214 >gi|145344819|ref|XP_001416922.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] gi|144577148|gb|ABO95215.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] Length = 271 Score = 184 bits (466), Expect = 5e-44, Method: Composition-based stats. Identities = 70/249 (28%), Positives = 119/249 (47%), Gaps = 24/249 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 GW I + + +++ ++G +I++ TV VKL FPL+KKQ S+ M+ Sbjct: 12 GWLGPITDGLESALEGIDSVLDGRVPYSYGFSIIVLTVLVKLATFPLSKKQVESSMQMQA 71 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP+I EL+ + P + LQ +LYK NPLAGC P+ +PVF +Y+ +S + Sbjct: 72 MQPRIKELQAMYANDP-ERLQMEQARLYKEAGFNPLAGCLPVFATLPVFIGLYRALSNAA 130 Query: 452 -EMRHAPFWGWIKDLAAADPT---NIFTLFGILPFYLPGFMHVGI--------WPIIMSL 499 E + WI L N + F L ++ G +G P+++ Sbjct: 131 SEGLLTDGFYWIPSLGGPTSIASRNAGSGFAWLWPFVDGHPPLGWHDTTAYLVLPVLLVA 190 Query: 500 SMFIQMKMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 S ++ ++ P PA + IL ++P++ F + PAGL +YW +N+I+ Q Sbjct: 191 SQYVSQQIVSPQPKTDDPAQQQSQAILKFLPLMIGFFSLNVPAGLTLYWFANNIITTAQT 250 Query: 554 AVIMKMHGA 562 ++ K A Sbjct: 251 LILRKTTTA 259 >gi|313894712|ref|ZP_07828273.1| stage III sporulation protein J [Selenomonas sp. oral taxon 137 str. F0430] gi|312976621|gb|EFR42075.1| stage III sporulation protein J [Selenomonas sp. oral taxon 137 str. F0430] Length = 225 Score = 184 bits (466), Expect = 5e-44, Method: Composition-based stats. Identities = 67/226 (29%), Positives = 118/226 (52%), Gaps = 26/226 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F I + M++ FY + G ++G I+L T+ +KL+ +PL KQ S M+ IQ Sbjct: 9 FAPIIHLLQMILGAFYTVTGAAGLESYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQ 68 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ +++EK+K P ++LQ+ +L++ +NPLAGC P+L+Q+P+ +Y + Sbjct: 69 PKMKKIQEKYKNDP-RMLQQKTGELFRQAGVNPLAGCLPLLVQMPILMGMYYALFNFAYP 127 Query: 454 RHA-PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 A + WI L+A DP I P++ +L+ F+Q KM+ Sbjct: 128 SEAAEAFLWIPHLSAPDPLYIL-------------------PVLSALTTFLQQKMTSTEM 168 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +++ MP+ + +FPAGL++YW N++ I QQ + + Sbjct: 169 NPQMKIMMTVMPLFIGWISLNFPAGLVLYWVTMNIVQIAQQWWMYR 214 >gi|320531077|ref|ZP_08032106.1| putative OxaA-like protein [Selenomonas artemidis F0399] gi|320136659|gb|EFW28612.1| putative OxaA-like protein [Selenomonas artemidis F0399] Length = 225 Score = 183 bits (465), Expect = 6e-44, Method: Composition-based stats. Identities = 67/226 (29%), Positives = 118/226 (52%), Gaps = 26/226 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F I + M++ FY + G ++G I+L T+ +KL+ +PL KQ S M+ IQ Sbjct: 9 FAPIIHLLQMILGAFYTVTGAAGLESYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQ 68 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ +++EK+K P ++LQ+ +L++ +NPLAGC P+L+Q+P+ +Y + Sbjct: 69 PKMKKIQEKYKNDP-RMLQQKTGELFRQAGVNPLAGCLPLLVQMPILMGMYYALFNFAYP 127 Query: 454 RHA-PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 A + WI L+A DP I P++ +L+ F+Q KM+ Sbjct: 128 SEAAEAFLWIPHLSAPDPLYIL-------------------PVLSALTTFLQQKMTSTEM 168 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +++ MP+ + +FPAGL++YW N++ I QQ + + Sbjct: 169 NPQMKIMMTVMPLFIGWISLNFPAGLVLYWVTMNIVQIAQQWWMYR 214 >gi|169830199|ref|YP_001700357.1| membrane protein oxaA 1 [Lysinibacillus sphaericus C3-41] gi|168994687|gb|ACA42227.1| Membrane protein oxaA 1 precursor [Lysinibacillus sphaericus C3-41] Length = 256 Score = 183 bits (465), Expect = 6e-44, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 100/224 (44%), Gaps = 23/224 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W FI P+ + YF +L+G + I+ T+ ++L PL KQ S+ M+ IQPK+ Sbjct: 36 WNEFIVWPLVSAIKYFADLLGTYAWGIIAVTIIIRLAILPLMIKQTKSSKKMQEIQPKLK 95 Query: 398 ELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 EL++K+ Q Q+ M++L +NPLAGC P+++Q+P+ Y IS Sbjct: 96 ELQKKYASKDAQTQQQYQQEMMKLMSESGVNPLAGCLPVIIQMPILIGFYHAISRMN--- 152 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 A T F I P P I L FI ++ P + Sbjct: 153 -------------ATSTFDLGNFFIFPLADPA----PALAITAGLMQFIVLRTGPAMDNP 195 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +++ MP + + + PA L +YW N+ISI Q I K Sbjct: 196 QMKIMMYIMPFMIIAFGMALPAALSLYWVIGNIISIFQNLYIYK 239 >gi|315105159|gb|EFT77135.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL050PA2] Length = 359 Score = 183 bits (465), Expect = 6e-44, Method: Composition-based stats. Identities = 64/238 (26%), Positives = 116/238 (48%), Gaps = 24/238 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+++ P+F S ++ +AI+ T+F++LL PL KQ S +M+ IQPK+ Sbjct: 36 FHYLWSPLFGRDSGI-----SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKA 90 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------SISL 451 ++EK+ + Q M+ LY+ +NP A C P+LLQ+P+F A+++V+ Sbjct: 91 IQEKYGDDRERAGQ-EMMNLYREEGVNPAASCLPVLLQMPIFLALFRVLDGASRGIPRGH 149 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-IWPIIMSLSMFIQM----- 505 P A + F + G V + IIM ++F Sbjct: 150 FFAKNPGLMESLQHAKFFGAELAGRFLPMNNGFGGTQVVALVLIIIMVATLFYTQLQLMR 209 Query: 506 KMSPP-----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K PP P + Q +++ P++++F+ SFP G+++YW SN+ ++ QQ ++++ Sbjct: 210 KNMPPESLTGPMAQQQKIMIYLFPLMYLFSGVSFPIGVMLYWCTSNLWTLGQQEILIR 267 >gi|228930050|ref|ZP_04093060.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936911|ref|ZP_04099661.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229124560|ref|ZP_04253745.1| Membrane protein oxaA 2 [Bacillus cereus 95/8201] gi|228658900|gb|EEL14555.1| Membrane protein oxaA 2 [Bacillus cereus 95/8201] gi|228822753|gb|EEM68635.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829549|gb|EEM75176.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 262 Score = 183 bits (465), Expect = 6e-44, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 123/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 99 LQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 159 EEIRTST--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + M MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 198 NSTSGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 255 >gi|229020261|ref|ZP_04177030.1| Membrane protein oxaA 2 [Bacillus cereus AH1273] gi|229026485|ref|ZP_04182840.1| Membrane protein oxaA 2 [Bacillus cereus AH1272] gi|228734793|gb|EEL85433.1| Membrane protein oxaA 2 [Bacillus cereus AH1272] gi|228741014|gb|EEL91243.1| Membrane protein oxaA 2 [Bacillus cereus AH1273] Length = 262 Score = 183 bits (465), Expect = 6e-44, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 121/238 (50%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + G+FGIAI++ T+ V+ PLA QY S MK +QP+ Sbjct: 39 WNHYFVYPISFMIQFVAHHIPGGSFGIAIIVITLVVRSAMIPLAVSQYRSQMKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 99 LQKLKKKHGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 159 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 198 NVTPGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMERE 255 >gi|259500780|ref|ZP_05743682.1| SpoIIIJ family protein [Lactobacillus iners DSM 13335] gi|315654127|ref|ZP_07907043.1| SpoIIIJ family protein [Lactobacillus iners ATCC 55195] gi|259167474|gb|EEW51969.1| SpoIIIJ family protein [Lactobacillus iners DSM 13335] gi|315488823|gb|EFU78469.1| SpoIIIJ family protein [Lactobacillus iners ATCC 55195] Length = 296 Score = 183 bits (464), Expect = 8e-44, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 106/249 (42%), Gaps = 22/249 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + + ++ N +G +I++ T+ V+++ PL S A +++QP++ Sbjct: 54 WDRYILYYISSFILWLAAILHNAYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEM 113 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + LR+K+ + LQ+ +LYK +NP GC P+L+Q+P+ A+++ I + E+ Sbjct: 114 EALRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRTPEL 173 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP + + + ++ ++ Q+ + + Sbjct: 174 QNGRFLWM--DLGHPDPYMVMPILAAIFTFIASYIG--------------QLSQAKSSNN 217 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK--MHGAEIGLIDRLR 571 + MPV S + L +YW SN+ +Q + + E+ L Sbjct: 218 AMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQAIQTFFLQNPIKYYRELKLKQLQE 277 Query: 572 STFSKNYNS 580 Y Sbjct: 278 KERKAKYRK 286 >gi|313893458|ref|ZP_07827028.1| stage III sporulation protein J [Veillonella sp. oral taxon 158 str. F0412] gi|313441901|gb|EFR60323.1| stage III sporulation protein J [Veillonella sp. oral taxon 158 str. F0412] Length = 222 Score = 183 bits (464), Expect = 9e-44, Method: Composition-based stats. Identities = 73/234 (31%), Positives = 115/234 (49%), Gaps = 29/234 (12%) Query: 339 FYFIAKPMFMLMSYFYNLV-----GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F I M L++Y + L ++G+AI+L T+F+K + PL KQ S M+ +Q Sbjct: 8 FQPIVDLMSSLVTYAFQLTQMVGYPSYGVAIILLTIFIKAILAPLTVKQIKSMKAMQELQ 67 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ EL+ K+K P + LQ M LYK +NPLAGC P+L+Q+P AI+ + Sbjct: 68 PRMQELQNKYKNDPAR-LQAEMGALYKEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYD 126 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 ++ + W+ L DP I P++ + S +I K + Sbjct: 127 QNYVQFLWLPSLGEPDPMYIL-------------------PVLSAASTWIMSKQTGSGAT 167 Query: 511 -PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 A + Q ++ +MP+ + +FP+GL+IYW SNV VQQ I K A+ Sbjct: 168 GAAAQQQKIMTIFMPLFIGYISLNFPSGLVIYWIVSNVFQFVQQHFIYKGLEAK 221 >gi|228993751|ref|ZP_04153656.1| Membrane protein oxaA 2 [Bacillus pseudomycoides DSM 12442] gi|228765962|gb|EEM14611.1| Membrane protein oxaA 2 [Bacillus pseudomycoides DSM 12442] Length = 260 Score = 183 bits (464), Expect = 9e-44, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 125/244 (51%), Gaps = 33/244 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ +++ + + V G+FGIAI++ T+ ++ PLA QY S MK +QP+ Sbjct: 37 WDHYFVYPISLMLQFVAHHVPGGSFGIAIIIITLVIRSAMIPLAVSQYRSQMKMKKMQPQ 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 I +L+EK + QK M +L KT NPLAGC P+L+Q+P+F A+Y IS + Sbjct: 97 IQKLKEKHGNVSKDIEKQKQYQKEMSELMKTGGWNPLAGCLPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E+R + +L ADP +I PI+ +L+ FIQMK+ Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PILAALATFIQMKVMQS 195 Query: 511 PADKGQAMIL-----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 G+ + + MP + +F + P+GL++YW N+ +++Q V+ K+ E G Sbjct: 196 NVTPGEQVQMLKVQQFMMPAMILFMGFAAPSGLVLYWITGNIFTMLQTIVLRKVMDREEG 255 Query: 566 LIDR 569 + Sbjct: 256 QLQN 259 >gi|297618524|ref|YP_003703683.1| membrane protein insertase, YidC/Oxa1 family [Syntrophothermus lipocalidus DSM 12680] gi|297146361|gb|ADI03118.1| membrane protein insertase, YidC/Oxa1 family [Syntrophothermus lipocalidus DSM 12680] Length = 259 Score = 183 bits (464), Expect = 9e-44, Method: Composition-based stats. Identities = 75/239 (31%), Positives = 122/239 (51%), Gaps = 28/239 (11%) Query: 342 IAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 I + L+ FY++ + N+G AI+L T+ +KLL +PL KQ S M+ +QP++ Sbjct: 5 IVQGFADLIQGFYHITVAIGLPNYGFAIILVTIAIKLLLYPLTHKQMKSMRKMQELQPRL 64 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 L+E++K+ P Q +QK + LYK H ++PL+GC P+L+Q+P+ A Y+ + A Sbjct: 65 KLLQERYKEDP-QRMQKEVFDLYKEHGVSPLSGCLPLLIQLPILVAFYRALYQLKYTVPA 123 Query: 457 P-FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADK 514 + W+ L+ DP F I+ ++ +IQ K+S P D Sbjct: 124 HAAFLWVPTLSKPDPYYGFA-------------------ILAGVTTYIQQKLSTLDPNDP 164 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM-KMHGAEIGLIDRLRS 572 Q +L MPV + ++ PAGL +YW NV+SI QQA + + G + R+ Sbjct: 165 SQKSMLYVMPVFIAWLAATLPAGLALYWVTFNVLSIAQQAWVNARSGGTKDSPDGRVER 223 >gi|270289895|ref|ZP_06196121.1| membrane protein oxaA [Pediococcus acidilactici 7_4] gi|270281432|gb|EFA27264.1| membrane protein oxaA [Pediococcus acidilactici 7_4] Length = 279 Score = 183 bits (464), Expect = 9e-44, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 22/249 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W I + Y + GN +G I++ TV ++++ PL Q ++ +QPK+ Sbjct: 36 WDGVIVYNFSKFIIYLSKICGNNYGWGIIVFTVLIRIIILPLMIYQTKTSMKTAELQPKL 95 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ Q L++ +LY +NP+AGC P+++Q+PV +A+Y +S + + Sbjct: 96 KELQQKYSSRDVETQQKLREEQQKLYAEAGVNPMAGCLPLIIQLPVMYALYAAVSRTQVL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L DP I + + LS ++ MK P A Sbjct: 156 KEGTFLWL--QLNDKDPYYILPILAAFFTF---------------LSTWLSMKAQPAGAQ 198 Query: 514 KGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G + + MP++ + +FPA + +YW +N+ + Q VI + +L++ Sbjct: 199 NGMTSAMTFGMPLIILITALNFPAAITLYWVVTNLFQVGQTLVIQNPFKIQKERQAKLQA 258 Query: 573 TFSKNYNSQ 581 +K + Sbjct: 259 EKAKRKAIE 267 >gi|309804916|ref|ZP_07698978.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 09V1-c] gi|309809716|ref|ZP_07703570.1| putative stage III sporulation protein J [Lactobacillus iners SPIN 2503V10-D] gi|312873301|ref|ZP_07733356.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2052A-d] gi|308165855|gb|EFO68076.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 09V1-c] gi|308169895|gb|EFO71934.1| putative stage III sporulation protein J [Lactobacillus iners SPIN 2503V10-D] gi|311091181|gb|EFQ49570.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2052A-d] Length = 291 Score = 182 bits (463), Expect = 1e-43, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 106/249 (42%), Gaps = 22/249 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + + ++ N +G +I++ T+ V+++ PL S A +++QP++ Sbjct: 49 WDRYILYYISSFILWLATILHNAYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEM 108 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + LR+K+ + LQ+ +LYK +NP GC P+L+Q+P+ A+++ I + E+ Sbjct: 109 EALRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRTPEL 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP + + + ++ ++ Q+ + + Sbjct: 169 QNGRFLWM--DLGHPDPYMVMPILAAIFTFIASYIG--------------QLSQAKSSNN 212 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK--MHGAEIGLIDRLR 571 + MPV S + L +YW SN+ +Q + + E+ L Sbjct: 213 AMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQAIQTFFLQNPIKYYRELKLKQLQE 272 Query: 572 STFSKNYNS 580 Y Sbjct: 273 KERKAKYRK 281 >gi|312879852|ref|ZP_07739652.1| membrane protein insertase, YidC/Oxa1 family [Aminomonas paucivorans DSM 12260] gi|310783143|gb|EFQ23541.1| membrane protein insertase, YidC/Oxa1 family [Aminomonas paucivorans DSM 12260] Length = 253 Score = 182 bits (463), Expect = 1e-43, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 24/253 (9%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 M +++FY L ++G+AI+L T+ V++L PL+ KQ +S M+ IQP++ ++EK+ Sbjct: 1 MLGTLNFFYGLTHSYGLAIILLTLAVRVLLHPLSHKQLMSMQRMQKIQPRLKVIQEKYAG 60 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + L + M++LYK + +NP AGC P+L+Q+P+F +Y+V+ + A F G D Sbjct: 61 DK-EKLNQEMMKLYKENGVNPAAGCMPLLVQLPIFILLYRVLM-QYDFAKATFLGVGLDT 118 Query: 466 AAAD--------PTNIFTLFGILPFY---------LPGFMHVGIWPIIMSLSMFIQMKMS 508 +A P + +L L + V I +++ + Q ++S Sbjct: 119 SALGALAAAVGMPVKNASFGSVLQGLAAHPEGLMRLDLYGPVVILIVLVGFLTWFQQRLS 178 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 + A + +MP+ F S P G+++YW S+ IS+ QQ +M E+ Sbjct: 179 -SANNPQMAFLNWFMPLFMSFICLSLPGGVMLYWGSSSFISVAQQWRVMHKAEQEM---- 233 Query: 569 RLRSTFSKNYNSQ 581 +++ T KN + Sbjct: 234 QVKPTLHKNKPEE 246 >gi|284047382|ref|YP_003397722.1| membrane protein insertase, YidC/Oxa1 family [Conexibacter woesei DSM 14684] gi|283951603|gb|ADB54347.1| membrane protein insertase, YidC/Oxa1 family [Conexibacter woesei DSM 14684] Length = 309 Score = 182 bits (463), Expect = 1e-43, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 115/234 (49%), Gaps = 12/234 (5%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + + ++ +F++ VG +G++I+L T+ V+++ PL KQ S ++ + P++ Sbjct: 9 ILQPLIDVLEQVLLFFHDTVGTGWGLSIILLTITVRVILLPLTLKQVKSMQRLQLLAPEL 68 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM--- 453 ++ K++ Q Q+ M++ Y+ + +NPLA C+P+L Q+P F +Y ++ L Sbjct: 69 RRIQAKYRSDK-QRQQQEMMKFYQENRVNPLASCFPLLFQLPFFIGLYYMLRTDLRFDIC 127 Query: 454 ------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + A + F L G + V + + + + + Sbjct: 128 GQTAKACADATAANFASVGAKPGSESFLFIPDLTGRATGAVLVVLIVLYVG-TQIASGLL 186 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 S D+ Q MI+ +P+VFV + +FPAGL++YW +N +IVQQ ++ K G Sbjct: 187 STASMDRNQRMIMLGLPIVFVAFIINFPAGLMLYWITTNCWTIVQQLIVRKTVG 240 >gi|184202000|ref|YP_001856207.1| hypothetical protein KRH_23540 [Kocuria rhizophila DC2201] gi|183582230|dbj|BAG30701.1| OxaA family protein [Kocuria rhizophila DC2201] Length = 327 Score = 182 bits (463), Expect = 1e-43, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 31/262 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVG-------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 F +I + + L+G + + I+ T+ ++ L PL KQ S M+ Sbjct: 11 FKWIVSAVLWAFHELFTLIGLDPTSGFTWVLCIVGLTLVMRTLTIPLFLKQIKSMRGMQE 70 Query: 392 IQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +QP++ +L+ K+K Q + + + LYK H NP A C PI++Q+P+FFA+++V+ Sbjct: 71 LQPELAKLQAKYKGKKDQLSRQAMAEEQMALYKEHGSNPFAACLPIIVQMPIFFALFQVL 130 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI----------WPIIM 497 + + N T+FG F G + M Sbjct: 131 RSVPQAAANNEAIHLLTPQMVHEFNESTIFGAPLFSTLMQPGTGNHAATVVLALVMIVAM 190 Query: 498 SLSMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 S + FI K P + Q M+L P++F +FP G+++YW+ SN+ Sbjct: 191 SATQFITQKQLTSRNMSDSAKESPMYRQQQMMLYLFPLIFAIGGINFPLGVLVYWTVSNL 250 Query: 548 ISIVQQAVIMKMHGAEIGLIDR 569 S+ QQ +++ + + +R Sbjct: 251 WSMGQQWWVIRNNPTKGSQAER 272 >gi|126651992|ref|ZP_01724184.1| OxaA-like protein precursor [Bacillus sp. B14905] gi|126591261|gb|EAZ85370.1| OxaA-like protein precursor [Bacillus sp. B14905] Length = 256 Score = 182 bits (463), Expect = 1e-43, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 99/224 (44%), Gaps = 23/224 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W FI P+ + YF L+G + I+ T+ ++L PL KQ S+ M+ IQPK+ Sbjct: 36 WNEFIVWPLVSAIKYFAELLGTYAWGIIAVTIIIRLAILPLMIKQTKSSKKMQEIQPKLK 95 Query: 398 ELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 EL++K+ Q Q+ M++L +NPLAGC P+++Q+P+ Y IS Sbjct: 96 ELQKKYASKDAQTQQQYQQEMMKLMSESGVNPLAGCLPVIIQMPILIGFYHAISRMN--- 152 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 A T F I P P I L FI ++ P + Sbjct: 153 -------------ATSTFDLGNFFIFPLADPA----PALAITAGLMQFIVLRTGPAMDNP 195 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +++ MP + + + PA L +YW N+ISI Q I K Sbjct: 196 QMKIMMYIMPFMIIAFGMALPAALSLYWVIGNIISIFQNLYIYK 239 >gi|225424558|ref|XP_002282031.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296081405|emb|CBI16838.3| unnamed protein product [Vitis vinifera] Length = 539 Score = 182 bits (463), Expect = 1e-43, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 122/269 (45%), Gaps = 28/269 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W I M ++ + +G AI+L TV VK FPL KKQ S M++ Sbjct: 91 WLSGITNYMETVLKVLKGGLSTLHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRS 150 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP+I +++++ + +Q +LYK INPLAGC P L IPV+ +Y+ +S Sbjct: 151 LQPQIKAIQQRYAGD-QERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 209 Query: 452 -EMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPIIMSL 499 E + WI L+ + I LF G P + + P+++ + Sbjct: 210 DEGLLTEGFFWIPSLSGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPMLLIV 269 Query: 500 SMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 S +I Q S P+ K + ++P++ + S P+GL +YW +N++S QQ Sbjct: 270 SQYISVQIMQSSQSNDPSLKTSQALTKFLPLMIGYFALSVPSGLSLYWFTNNILSTAQQV 329 Query: 555 VIMKMHGAEIGLI----DRLRSTFSKNYN 579 + K+ GA+I + D + S+ Sbjct: 330 WLQKLGGAQIPVKQFSDDIEKEELSQIQK 358 >gi|228948751|ref|ZP_04111028.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810883|gb|EEM57227.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 262 Score = 182 bits (463), Expect = 1e-43, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 99 LQKLKQKYGEVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 159 EEIRTST--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + M MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 198 NSTSGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 255 >gi|326489461|dbj|BAK01711.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 512 Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 24/266 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WF I M ++ + + +G AI+L TV +K FPL KKQ S M++ Sbjct: 99 WFAGITGSMETVLKVLKDGLSTLHVPYPYGFAIILLTVLIKGATFPLTKKQVESALAMRS 158 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ ++E+ + +Q LYK ++PLAGC P L+ IPV+ +YK +S Sbjct: 159 LQPQVKAIQERHAGD-QERIQLETAHLYKLSGVDPLAGCLPTLVTIPVWIGLYKALSNVA 217 Query: 452 -EMRHAPFWGWIKDLAAADPTN-------IFTLF----GILPFYLPGFMHVGIWPIIMSL 499 E + WI LA I +F G P P + + P+++ + Sbjct: 218 NEGLLTEGFFWIPSLAGPTTIAARESGQGISWIFPFTDGHPPLGWPDTLAYLVLPVLLVI 277 Query: 500 SMF-----IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 S + +Q S P+ +G + ++P++ + S P+GL +YW +NV+S QQ Sbjct: 278 SQYVSAQIMQSSQSNDPSQQGAQAAVKFLPLLIGYFALSVPSGLSLYWLTNNVLSSAQQV 337 Query: 555 VIMKMHGAEIGLIDRLRSTFSKNYNS 580 + K+ GA+ + + + + + Sbjct: 338 WLQKLGGAKNPVQEYIDKLGREESTN 363 >gi|309805916|ref|ZP_07699948.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 03V1-b] gi|325912298|ref|ZP_08174695.1| putative stage III sporulation protein J [Lactobacillus iners UPII 143-D] gi|308167692|gb|EFO69839.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 03V1-b] gi|325475957|gb|EGC79126.1| putative stage III sporulation protein J [Lactobacillus iners UPII 143-D] Length = 291 Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 106/249 (42%), Gaps = 22/249 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + + ++ N +G +I++ T+ V+++ PL S A +++QP++ Sbjct: 49 WDRYILYYISSFILWLAAILHNAYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEM 108 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + LR+K+ + LQ+ +LYK +NP GC P+L+Q+P+ A+++ I + E+ Sbjct: 109 EALRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRTPEL 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP + + + ++ ++ Q+ + + Sbjct: 169 QNGRFLWM--DLGHPDPYMVMPILAAIFTFIASYIG--------------QLSQAKSSNN 212 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK--MHGAEIGLIDRLR 571 + MPV S + L +YW SN+ +Q + + E+ L Sbjct: 213 AMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQAIQTFFLQNPIKYYRELKLKQMQE 272 Query: 572 STFSKNYNS 580 Y Sbjct: 273 KERKAKYRK 281 >gi|298246125|ref|ZP_06969931.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter racemifer DSM 44963] gi|297553606|gb|EFH87471.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter racemifer DSM 44963] Length = 353 Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats. Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 28/245 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + P+F + FY L G+FG+AI++ TV +KLL FPL +Q S+ M+ +QPKI Sbjct: 9 FNIIFSYPIFNGLVVFYRLFGDFGLAIIVLTVLIKLLLFPLTLQQLRSSKAMQVLQPKIA 68 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+++K Q AM QLYK + + PLAGC P+++Q+PV + +Y + L +H Sbjct: 69 EIKKKHPGD-VQSQSLAMNQLYKEYGVKPLAGCLPMVIQLPVLYGLYFAVGGILRDQHLT 127 Query: 458 FWGWIKDLA------AADPTNIFTLF------GILPFYLPGFMHVGIWPIIMSLSMFIQM 505 ++L P F + P H+ PI+ L+ F+ + Sbjct: 128 IETLNRELYPFVAPFKGVPDINLRWFEFLNPHWFISLGQPDPTHI--LPILAGLATFVSL 185 Query: 506 KM-------------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +M +P P + + MP V +F +FPAGL +YW+ S++ VQ Sbjct: 186 RMAQPRNAQAKKDKSTPDPMVQSMQTMQYVMPFVTIFIGWTFPAGLALYWTVSSIFQAVQ 245 Query: 553 QAVIM 557 Q + Sbjct: 246 QYFVT 250 >gi|315039282|ref|YP_004032850.1| stage III sporulation protein J [Lactobacillus amylovorus GRL 1112] gi|325957756|ref|YP_004293168.1| stage III sporulation protein J [Lactobacillus acidophilus 30SC] gi|312277415|gb|ADQ60055.1| stage III sporulation protein J [Lactobacillus amylovorus GRL 1112] gi|325334321|gb|ADZ08229.1| stage III sporulation protein J [Lactobacillus acidophilus 30SC] gi|327184389|gb|AEA32836.1| stage III sporulation protein J [Lactobacillus amylovorus GRL 1118] Length = 298 Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats. Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 22/240 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + L+GN +G AI++ TV V+++ PL ST M++IQP+I Sbjct: 56 WDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTVIVRVILLPLNAISIRSTTKMQSIQPQI 115 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP AGC P+++Q+PV +A+Y I + ++ Sbjct: 116 NELRKKYPGRDTESRSLLQQETNKLYKEAGVNPYAGCLPLIIQLPVMYALYGAILRTPQL 175 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F DL+ DP I + + + LS +I +P + Sbjct: 176 QTGRFLWM--DLSKPDPYFIMPILAMAFTF---------------LSTYISQLSTPASSQ 218 Query: 514 KGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G I+ M ++ F + + +YW SN+ VQ ++ + + + Sbjct: 219 NGMTKIMTYGMSIMVGVMALQFQSAITLYWVISNLFQAVQTFILQNPLKYKREQEAKAEA 278 >gi|312128801|ref|YP_003993675.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor hydrothermalis 108] gi|311778820|gb|ADQ08306.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor hydrothermalis 108] Length = 341 Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 34/251 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W F+A P+ L+ Y+ + G++GIA++L T+ V+ L PL KQ ST+ M Sbjct: 5 WLDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P++ E+++K+K + +Q+ M++LY+ NP GCWP+L+Q+P+ F++Y V L Sbjct: 65 VAPRLQEIQQKYKND-QKKMQEEMLKLYQETGYNPAGGCWPLLIQLPILFSLYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDLAAADPTNIFT---------------LFGI---------LPFYLPGF 487 ++KDL T FGI LP F Sbjct: 124 VYVLGKSHQYVKDLITGATGYNITQRIVDEAQKLGLDMHFFGINLAQKELIVLPILSAAF 183 Query: 488 MHVGIWPIIMSLSMF---IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 + I + S F S A+ ++ + P++ F P+GL++YW+ Sbjct: 184 SFLSILYSMNSQKKFNPQYSQSQSNAMAESMNKSLMIFSPLMSYFIALQVPSGLVLYWTV 243 Query: 545 SNVISIVQQAV 555 +N+ +I+QQ + Sbjct: 244 TNLFTILQQFI 254 >gi|309807784|ref|ZP_07701716.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 01V1-a] gi|308168886|gb|EFO70972.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 01V1-a] Length = 294 Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 106/249 (42%), Gaps = 22/249 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + + ++ N +G +I++ T+ V+++ PL S A +++QP++ Sbjct: 49 WDRYILYYISSFILWLAAILHNAYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEM 108 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + LR+K+ + LQ+ +LYK +NP GC P+L+Q+P+ A+++ I + E+ Sbjct: 109 EALRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRTPEL 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP + + + ++ ++ Q+ + + Sbjct: 169 QNGRFLWM--DLGHPDPYMVMPILAAIFTFIASYIG--------------QLSQAKSSNN 212 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK--MHGAEIGLIDRLR 571 + MPV S + L +YW SN+ +Q + + E+ L Sbjct: 213 AMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQAIQTFFLQNPIKYYRELKLKQLQE 272 Query: 572 STFSKNYNS 580 Y Sbjct: 273 KERKAKYRK 281 >gi|302190769|ref|ZP_07267023.1| stage III sporulation protein J [Lactobacillus iners AB-1] gi|309804034|ref|ZP_07698115.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 11V1-d] gi|312871192|ref|ZP_07731290.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 3008A-a] gi|312872789|ref|ZP_07732854.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2062A-h1] gi|312874783|ref|ZP_07734802.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2053A-b] gi|325913658|ref|ZP_08176020.1| putative stage III sporulation protein J [Lactobacillus iners UPII 60-B] gi|329919822|ref|ZP_08276773.1| putative stage III sporulation protein J [Lactobacillus iners SPIN 1401G] gi|308163802|gb|EFO66068.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 11V1-d] gi|311089528|gb|EFQ47953.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2053A-b] gi|311091831|gb|EFQ50210.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2062A-h1] gi|311093206|gb|EFQ51552.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 3008A-a] gi|325477017|gb|EGC80167.1| putative stage III sporulation protein J [Lactobacillus iners UPII 60-B] gi|328937169|gb|EGG33597.1| putative stage III sporulation protein J [Lactobacillus iners SPIN 1401G] Length = 291 Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 106/249 (42%), Gaps = 22/249 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + + ++ N +G +I++ T+ V+++ PL S A +++QP++ Sbjct: 49 WDRYILYYISSFILWLAAILHNAYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEM 108 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + LR+K+ + LQ+ +LYK +NP GC P+L+Q+P+ A+++ I + E+ Sbjct: 109 EALRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRTPEL 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP + + + ++ ++ Q+ + + Sbjct: 169 QNGRFLWM--DLGHPDPYMVMPILAAIFTFIASYIG--------------QLSQAKSSNN 212 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK--MHGAEIGLIDRLR 571 + MPV S + L +YW SN+ +Q + + E+ L Sbjct: 213 AMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQAIQTFFLQNPIKYYRELKLKQLQE 272 Query: 572 STFSKNYNS 580 Y Sbjct: 273 KERKAKYRK 281 >gi|312869223|ref|ZP_07729395.1| putative stage III sporulation protein J [Lactobacillus oris PB013-T2-3] gi|311095244|gb|EFQ53516.1| putative stage III sporulation protein J [Lactobacillus oris PB013-T2-3] Length = 269 Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 110/247 (44%), Gaps = 21/247 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N G +G+ I++ T+ +++L PLA Q S M+ I P++ Sbjct: 29 WDHYIVYNFSQFIIWLSNHTGGYGMGIIIFTIIIRVLLLPLAFYQTKSMVRMQEITPQLK 88 Query: 398 ELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++K+ + +Q+ +LYK ++P+A P+++Q+P+ +A+Y+ I + E+R Sbjct: 89 AVQKKYSSRDRDSMMKMQEETQKLYKEAGVHPMASMLPMIVQLPIMWALYQAIWRTPELR 148 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 H F L DP + + + ++ ++ + S P + Sbjct: 149 HGTFLWL--QLGHTDPYYVLPVLAAVFTFVSSWLSMA----------------SMPEKNS 190 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 M+ +MP++ F F + + +YW SN +VQ ++ ++ R Sbjct: 191 MTTMMTWFMPIMIFFMALGFSSAITLYWVVSNAFQVVQTLLLQNPFKIRREREEKQRVEK 250 Query: 575 SKNYNSQ 581 ++ + Sbjct: 251 ARKRKIE 257 >gi|224104461|ref|XP_002313443.1| inner membrane protein [Populus trichocarpa] gi|222849851|gb|EEE87398.1| inner membrane protein [Populus trichocarpa] Length = 446 Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats. Identities = 72/256 (28%), Positives = 123/256 (48%), Gaps = 24/256 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M ++ + + +G AI+L TVFVK+ PL KKQ ST M+ Sbjct: 94 GWFGFISDGMEFVLKVLKDGLSAVHVPYAYGFAIILLTVFVKVATLPLTKKQVESTLAMQ 153 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QPKI +++++ + + +Q +LY+ +NPLAGC+P L IPV+ +Y+ +S Sbjct: 154 NLQPKIKAIQQRYAGN-QERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNV 212 Query: 451 L-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGIWPIIM--------S 498 E + WI L + + P G +G Sbjct: 213 ANEGVLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWNDTAAYLVLPVLLV 272 Query: 499 LSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +S ++ M++ PP D Q ++ ++P++ + S P+GL IYW +NV+S QQ Sbjct: 273 VSQYVSMEIMKPPQTDDPTQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 332 Query: 554 AVIMKMHGAEIGLIDR 569 + ++ GA+ + + Sbjct: 333 VWLRQLGGAKPVVNEN 348 >gi|228949208|ref|ZP_04111476.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810491|gb|EEM56844.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 255 Score = 182 bits (462), Expect = 2e-43, Method: Composition-based stats. Identities = 74/227 (32%), Positives = 119/227 (52%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L++YF NL G N+G+AI++TT+ ++ PL KQ ST M+ +QP++ Sbjct: 36 WNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEM 95 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 96 VKLKEKYSSKDQATQQKLQQKMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-- 511 F + DL ADP I P++ +++ FIQ K++ Sbjct: 156 SKHTFLWF--DLGQADPYYIL-------------------PVVAAITTFIQQKLAMAGTA 194 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 GQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYLIK 241 >gi|323341096|ref|ZP_08081344.1| stage III sporulation protein J [Lactobacillus ruminis ATCC 25644] gi|323091517|gb|EFZ34141.1| stage III sporulation protein J [Lactobacillus ruminis ATCC 25644] Length = 268 Score = 182 bits (462), Expect = 2e-43, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 23/249 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + + G N+G I++ T+ V+++ PL Q S IQP++ Sbjct: 26 WDHYIIWNFIRAIQGLSRIFGHNYGWGIVVFTIIVRIIILPLMIYQMKSMRKTTEIQPQL 85 Query: 397 DELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 L++K+ +++ + +LY +NP+AGC P+L+Q+P+ A+Y+ I S Sbjct: 86 MALQKKYPDRSDPEQMRMMSEEQKRLYAEAGVNPVAGCLPLLVQMPILIALYQAIFRSET 145 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 ++ F L DP I + + +L ++ V + P Sbjct: 146 LKTGKFLWM--QLGDKDPYYILPILAAIFTFLTSWLSV----------------KAQPEK 187 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + ++ +MP++ + S PA L +YW +N S+ Q +I + ++ R Sbjct: 188 NAMTTGMMVFMPLMILVTAISVPAALSLYWVVTNAFSVGQTLLINNPFKIQREREEKARL 247 Query: 573 TFSKNYNSQ 581 K Q Sbjct: 248 EKKKARKLQ 256 >gi|156741411|ref|YP_001431540.1| 60 kDa inner membrane insertion protein [Roseiflexus castenholzii DSM 13941] gi|156232739|gb|ABU57522.1| 60 kDa inner membrane insertion protein [Roseiflexus castenholzii DSM 13941] Length = 345 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 19/236 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W F + + ++ FY G+ G+AI+L T+ +LL PL K S+ M+ +QP + Sbjct: 4 WLAF-VEFLQQVLLTFYAWTGSAGLAIILFTIVARLLILPLTIKSLQSSRKMQELQPHMK 62 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 EL+ K+ + P Q LQ+ ++LY+ + +NP+ GC P+LLQ+P+F +Y+ + + A Sbjct: 63 ELQRKYGKDP-QKLQEETMRLYREYKVNPVGGCLPMLLQLPIFLGVYQAVINLTRVSPAE 121 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-------------PIIMSLSMFIQ 504 G + F+ P +W PI+ + I Sbjct: 122 HAGSAMLRVLNEQGIAFSTATTATLGQPQLAGSFLWLPDLGKTDPYYILPILSVIFQLIV 181 Query: 505 MKM-SPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M +P D Q ++ M P+VF + FP+G ++YW +++SI+QQ VI Sbjct: 182 QLMATPRIQDPQQKAMMQSMLILPIVFGYIGFIFPSGAVLYWVVGSILSIIQQYVI 237 >gi|260887480|ref|ZP_05898743.1| stage III sporulation protein J [Selenomonas sputigena ATCC 35185] gi|330840118|ref|YP_004414698.1| membrane protein insertase, YidC/Oxa1 family [Selenomonas sputigena ATCC 35185] gi|260862767|gb|EEX77267.1| stage III sporulation protein J [Selenomonas sputigena ATCC 35185] gi|329747882|gb|AEC01239.1| membrane protein insertase, YidC/Oxa1 family [Selenomonas sputigena ATCC 35185] Length = 222 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 62/225 (27%), Positives = 116/225 (51%), Gaps = 26/225 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F+ + + ++ Y G N+GIAI+L T+ +K+ +PL KQ S M+ +Q Sbjct: 8 FHPVIAVIQFMLENLYAFTGLLGFENYGIAIILLTILIKVCLYPLTVKQVRSMKGMQELQ 67 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ +L+EK+K +P Q++Q+ + +LYK +NPLAGC P+L+Q+P+ ++ + Sbjct: 68 PKMKKLQEKYKDNP-QMMQQKIGELYKEAGVNPLAGCLPLLIQMPILMGMFYALQGY-AY 125 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 P + W+ L+ DP I P++ +LS + K + + Sbjct: 126 SGTPSFLWLASLSEPDPHYIL-------------------PVLSALSTWFVQKQTSTETN 166 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +++ MP+ + +F +GL++YW N++ IVQQ + + Sbjct: 167 QQMKIMMIVMPIFIGWISLNFASGLVLYWVTMNLVQIVQQWWMYR 211 >gi|229163993|ref|ZP_04291932.1| Membrane protein oxaA 2 [Bacillus cereus R309803] gi|228619495|gb|EEK76382.1| Membrane protein oxaA 2 [Bacillus cereus R309803] Length = 260 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 71/238 (29%), Positives = 120/238 (50%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + +FGIAI++ T+ V+ PLA QY S MK +QP+ Sbjct: 37 WNHYFVYPISYMIQFVAHHIPGASFGIAIIVITLVVRSAMIPLAVSQYRSQMKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L ++ NPLAGCWPI +Q+P+F A+Y IS + Sbjct: 97 LQKLKKKYGDVSKDLEKQKQYQKEMSELMRSGGWNPLAGCWPIFIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---- 506 E+R + +L ADP +I PII +L+ FIQMK Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 195 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M+ + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 196 NMASGEQSQMLKVQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMERE 253 >gi|293380888|ref|ZP_06626924.1| putative stage III sporulation protein J [Lactobacillus crispatus 214-1] gi|290922561|gb|EFD99527.1| putative stage III sporulation protein J [Lactobacillus crispatus 214-1] Length = 291 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 22/240 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + L+GN +G AI++ TV V+++ PL ST M++IQP+I Sbjct: 49 WDRWIVYYMSAFILGLAKLMGNSYGWAIIVFTVIVRVILVPLNAISIRSTTKMQSIQPQI 108 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+L+Q+PV +A+Y I + ++ Sbjct: 109 NELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLPVMYALYGAILRTPQL 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F DL+ DP I + ++ + LS +I +P + Sbjct: 169 QTGRFLWM--DLSKPDPYYIMPILAMIFTF---------------LSTYISQLSTPKSSQ 211 Query: 514 KGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G ++ M ++ +F + + +YW SN+ +Q ++ + + Sbjct: 212 NGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQALQTFILQNPIKYRREQEAKAEA 271 >gi|327438165|dbj|BAK14530.1| preprotein translocase subunit YidC [Solibacillus silvestris StLB046] Length = 260 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 26/228 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLV----GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 W +I P+ + F ++ N+ AI++ TV ++L+ PL KQ S+ M+ +Q Sbjct: 36 WNEYIVWPLVSFIKLFADMFEGNAANYAFAIIIVTVIIRLIILPLTIKQVKSSKKMQEMQ 95 Query: 394 PKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 PK+ EL+ K+ Q Q+ M+QL +T +NPLAGC PIL+Q+P+ Y IS Sbjct: 96 PKLKELQAKYSSKDAATQQKYQQEMMQLMQTSGVNPLAGCLPILIQMPILIGFYHAISRM 155 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 A G + A+P+ +F +I L ++ + P Sbjct: 156 NATPDAFELGTFLAVPLAEPSIVFA-------------------VIAGLIQYVVLMTGPA 196 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + +++ MP++ V PA L +YW N +S++Q VI K Sbjct: 197 VDNPQMKIMMYIMPLMIVGFGIILPAALSLYWVVGNFVSVLQNLVIYK 244 >gi|228917653|ref|ZP_04081195.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228842030|gb|EEM87135.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 262 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WDHYFVYPISFMIQLVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 99 LQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 159 EEIRTST--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + M MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 198 NSTSGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 255 >gi|259502133|ref|ZP_05745035.1| stage III sporulation protein J [Lactobacillus antri DSM 16041] gi|259169946|gb|EEW54441.1| stage III sporulation protein J [Lactobacillus antri DSM 16041] Length = 281 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 110/247 (44%), Gaps = 21/247 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N G +G+ I++ T+ +++L PLA Q S M+ + P++ Sbjct: 41 WDHYIVYNFSQFIIWLSNHTGGYGMGIIIFTIIIRVLLLPLAFYQTKSMVRMQEVAPQLK 100 Query: 398 ELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++K+ + +Q+ +LYK ++P+A P+++Q+P+ +A+Y+ I + E+R Sbjct: 101 AIQKKYSSRDRDSMMKMQEETQKLYKEAGVHPMASMLPMIVQLPIMWALYQAIWRTPELR 160 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 H F L DP + + + ++ ++ + S P + Sbjct: 161 HGTFLWL--QLGHTDPYYVLPVLAAVFTFVSSWLSMA----------------SMPEKNS 202 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 M+ +MP++ F F + + +YW SN +VQ ++ ++ R Sbjct: 203 MTTMMTWFMPIMIFFMALGFSSAITLYWVVSNAFQVVQTLLLQNPFKIRREREEKQRVAK 262 Query: 575 SKNYNSQ 581 ++ + Sbjct: 263 ARKRKIE 269 >gi|38372239|sp|Q8LKI3|ALB32_CHLRE RecName: Full=Inner membrane ALBINO3-like protein 2, chloroplastic; Flags: Precursor gi|21361062|gb|AAM49792.1|AF514291_1 albino 3-like protein [Chlamydomonas reinhardtii] Length = 422 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 123/249 (49%), Gaps = 20/249 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +F F+ + + + + ++G AI+ TV VK+ FPL +KQ ST +++ +QP++ Sbjct: 80 FFEFVLQTLDEGLES-AKIPYSYGFAIIALTVLVKVATFPLTQKQVESTLSLQALQPRVK 138 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-EMRHA 456 EL+ K+ P + LQ +LYK +NPLAGC+P L IPVF +Y +S + E Sbjct: 139 ELQAKYADDP-ENLQLETARLYKEAGVNPLAGCFPTLATIPVFIGLYNALSNAAKEGLLT 197 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--------WPIIMSLSMFIQMKM- 507 + WI L PT I L + G VG P+++ S + K+ Sbjct: 198 EGFFWIPSLGG--PTTIGGGLEWLVPFENGAPPVGWANAAAYLVMPVLLVASQYASQKII 255 Query: 508 ----SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + P+ + IL ++P++ + + P+GL +YW +N++S QQ + + Sbjct: 256 SSQNNQDPSQQQAQAILKFLPLMIGWFSLNVPSGLTLYWFVNNLLSTGQQLYL--KATVK 313 Query: 564 IGLIDRLRS 572 + + + +++ Sbjct: 314 VNIPEAIKA 322 >gi|302872912|ref|YP_003841548.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor obsidiansis OB47] gi|302575771|gb|ADL43562.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor obsidiansis OB47] Length = 341 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 115/251 (45%), Gaps = 34/251 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W F+A P+ L+ Y+ + G++GIA++L T+ V+ L PL KQ S + M Sbjct: 5 WLDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIHSMSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P++ E+++K+K + LQ+ M++LY+ NP AGCWP+L+Q+P+ F++Y V L Sbjct: 65 VAPRLQEIQQKYKND-QKKLQEEMLKLYQETGYNPAAGCWPLLIQMPILFSLYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDLAAA-----------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +++DL D L + + PI+ + + Sbjct: 124 VYVLGKSHQYVRDLVTGATGYGITQRIVDEAQKLGLDMHFLGINLAKKELLVLPILSAAT 183 Query: 501 MFIQ----------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 M + S A+ + P++ F P+GL++YW+ Sbjct: 184 MLLSVWFSSNSQKKFNPQYSQSQSNAMAESMNRSFMIISPLMSYFIALQVPSGLVLYWTV 243 Query: 545 SNVISIVQQAV 555 +N+ +I+QQ V Sbjct: 244 TNLFTILQQFV 254 >gi|148658060|ref|YP_001278265.1| 60 kDa inner membrane insertion protein [Roseiflexus sp. RS-1] gi|148570170|gb|ABQ92315.1| 60 kDa inner membrane insertion protein [Roseiflexus sp. RS-1] Length = 330 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 18/235 (7%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W F + + ++ FY G+ G AI+L T+ +++ PL K S+ M+ +QP + Sbjct: 4 WLAF-VEFLQQVLLTFYRWTGSAGFAIILFTIVARIVILPLTIKSLQSSRKMQELQPHMK 62 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 EL+ K+ + P Q LQ+ ++LY+ + +NP+ GC P+LLQ+P+F +Y+ + + A Sbjct: 63 ELQRKYGKDP-QKLQEETMRLYREYKVNPVGGCLPMLLQLPIFLGVYQAVINLTRVSPAE 121 Query: 458 FWGWIK---------DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS----MFIQ 504 G + A T +LP + I+ LS + +Q Sbjct: 122 HAGSAMLRVLNEQGIAVGVASATLGQPQLAGSFLWLPDLGKTDPYYILPILSVIFQLIVQ 181 Query: 505 MKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + +P D Q ++ M P+VF + FP+G ++YW +++SI+QQ VI Sbjct: 182 LMATPRVQDPQQKAMMQSMLILPIVFGYIGFIFPSGAVLYWVVGSILSIIQQYVI 236 >gi|290968158|ref|ZP_06559703.1| stage III sporulation protein J family protein [Megasphaera genomosp. type_1 str. 28L] gi|290781833|gb|EFD94416.1| stage III sporulation protein J family protein [Megasphaera genomosp. type_1 str. 28L] Length = 223 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 18/224 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLV-----GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + M ++Y Y ++G AI++ T+ +K + PL KQ S M+ I Sbjct: 5 IISPLTYIMSTFLTYCYTFTQHIGYPSYGAAIIMLTLIIKFILSPLTAKQIKSMQGMQVI 64 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPKI EL++K+K + + LQ+ M +LYK +NPL+GC PI++Q+P +I+ + Sbjct: 65 QPKIKELQKKYKGN-QKKLQEEMRKLYKETGVNPLSGCLPIIIQMPFLISIFYALRNYPY 123 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 H + W+ L + DPT++ + L +L G Sbjct: 124 DPHFESFLWLPSLGSPDPTHVLPVLSALSTFLIQKQMTGA------------QVTEGEGQ 171 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q ++ MP+ + FP+GL+IYW SNV QQ ++ Sbjct: 172 ASQQKIMQIVMPLFIGWISWRFPSGLVIYWVLSNVFQWAQQMIM 215 >gi|295425822|ref|ZP_06818503.1| ParB/SpoJ family partitioning protein [Lactobacillus amylolyticus DSM 11664] gi|295064515|gb|EFG55442.1| ParB/SpoJ family partitioning protein [Lactobacillus amylolyticus DSM 11664] Length = 296 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 22/247 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + + L+GN +G+ I++ T+ V+++ PL S+ M+ IQP++ Sbjct: 55 WDRWIIYYVSAFLLWLAKLMGNNYGVTIIVFTILVRIILLPLNAISIRSSTKMQQIQPQV 114 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 D LR+K+ Q+L + +LYK +NP GC P+L+Q+PV +A+Y I + ++ Sbjct: 115 DALRKKYPGRDTESRQLLSQETNKLYKEAGVNPYTGCLPLLIQLPVMYALYMAILRTPQL 174 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP I + ++ + LS +I +P A Sbjct: 175 QNGHFLWM--DLGKPDPYYIMPILAMVFTF---------------LSTYISQISTPKSAQ 217 Query: 514 KGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G + M ++ F + + +YW SN+ VQ + + ++ + Sbjct: 218 NGMTKFMTYGMSIMVGAVAIGFQSAITLYWVISNLFQAVQTFFLQNPIKYKREQEAKVTA 277 Query: 573 TFSKNYN 579 + + Sbjct: 278 ERERKHR 284 >gi|23100949|ref|NP_694416.1| stage III sporulation protein J [Oceanobacillus iheyensis HTE831] gi|38503017|sp|Q8EKU1|OXAA_OCEIH RecName: Full=Membrane protein oxaA; Flags: Precursor gi|22779184|dbj|BAC15450.1| stage III sporulation protein J [Oceanobacillus iheyensis HTE831] Length = 252 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 68/234 (29%), Positives = 111/234 (47%), Gaps = 20/234 (8%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 D W P+ L++ + +G+AI++ T+FV+LL PL KQ S+ M+ IQ Sbjct: 33 DGIWNTIFVYPVSWLITNVAGVFNEGYGLAIIIVTLFVRLLLMPLNVKQIKSSKAMQEIQ 92 Query: 394 PKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 PK+ E+++K+ + Q LQ+ ++L++ + +NPLAGC PIL+Q+P+F A+Y I + Sbjct: 93 PKLQEIQKKYTSKDANTQQKLQQETMELFQKNGVNPLAGCLPILVQMPIFVAMYHAIMRT 152 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E+ F P I + L +L L M M+ Sbjct: 153 PEISTHSFLW----FQLGSPDYILPILTGLFTFLQ-----------QKLMMSTNTSMNSN 197 Query: 511 PADK-GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P K ++L MP++ FPA L +YW N+ + Q +I K A+ Sbjct: 198 PQMKLQMQIMLYVMPIMIGVMAFFFPAALALYWVTGNIFMVFQTLLINKPMMAK 251 >gi|168046980|ref|XP_001775950.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672782|gb|EDQ59315.1| predicted protein [Physcomitrella patens subsp. patens] Length = 313 Score = 181 bits (460), Expect = 3e-43, Method: Composition-based stats. Identities = 74/254 (29%), Positives = 125/254 (49%), Gaps = 25/254 (9%) Query: 335 DWGWFYFIAKPMFMLMSYFYN------LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 D GW I + + +++ + L ++G AI+L TV VK +PL KKQ ST Sbjct: 33 DGGWLGGITNTLELALTFLKDGIAKIGLPYSYGFAIILLTVIVKAATYPLTKKQVESTLA 92 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+N+QPKI ++ +++ + +Q +LYK +NPLAGC P L +PV+ +Y+ +S Sbjct: 93 MQNLQPKIKAIQTRYQGD-QERIQLETARLYKQAGVNPLAGCLPTLATLPVWIGLYRALS 151 Query: 449 ISL-EMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPII 496 E + WI LA + I LF G P + + P++ Sbjct: 152 NVANEGLLTEGFFWIPSLAGPTTIAARSSGSGISWLFPFVDGAPPLGWGDTIAYLVLPVL 211 Query: 497 MSLSMFIQMKMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 + S ++ M++ P PA +IL ++P++ + S P+GL +YW +NV+S Sbjct: 212 LIGSQYVSMQIMQPATASNDPAQNQSQLILKFLPLMIGYFSLSVPSGLSLYWLTNNVLST 271 Query: 551 VQQAVIMKMHGAEI 564 QQ + ++ GA+ Sbjct: 272 AQQVYLRQLGGAQP 285 >gi|328950558|ref|YP_004367893.1| membrane protein insertase, YidC/Oxa1 family [Marinithermus hydrothermalis DSM 14884] gi|328450882|gb|AEB11783.1| membrane protein insertase, YidC/Oxa1 family [Marinithermus hydrothermalis DSM 14884] Length = 449 Score = 181 bits (459), Expect = 3e-43, Method: Composition-based stats. Identities = 73/297 (24%), Positives = 140/297 (47%), Gaps = 31/297 (10%) Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 P + + + +G + + IT+ G T ++ G E + E Sbjct: 177 PKAGFALVLRPDEVLEGKVTLENNGAVAAITLPAG---THRLQVYGGQNELVRFY-VEGY 232 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 +P WG ++ + +M Y GN+G+AI++ T+FV+LL +PL +Q+ Sbjct: 233 YDLPGLFQANIWG---TLSLGLIYIMETAYRFTGNWGLAILVLTLFVRLLLWPLMHQQFK 289 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A + ++P +DE+ +K+K P + +A++++Y+ H +NP +GC P+ +Q+P+ F ++ Sbjct: 290 SMAELNRLKPLMDEINKKYKNDPEKR-TEALMKMYQEHKVNPASGCLPLFIQLPILFILW 348 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 +VI+ + + W+ DLA DP I + + + + I+ S+F Sbjct: 349 RVIANFEFGQG---FLWLPDLALPDPYYILPILYVGVMIVQTLLMAHGNKDIIRQSIF-- 403 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 M + FV+ + FP+G+ +YW +S +I + QQ +I K G Sbjct: 404 ------------------MNLFFVYLVLQFPSGVTLYWVFSTLIGLGQQLLINKQLG 442 >gi|146297758|ref|YP_001181529.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145411334|gb|ABP68338.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 349 Score = 181 bits (459), Expect = 3e-43, Method: Composition-based stats. Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 34/251 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W F+A P+ L+ Y+ + G++GIAI+L T+ V+ L PL KQ ST+ M Sbjct: 5 WLDFLAIPLGRLLKLIYDFLHGANIPGSYGIAIILLTLIVRGLLLPLYIKQIASTSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P+I E+++K+K + +Q+ M++LY+ NP +GCWP+L+QIP+ FA+Y V L Sbjct: 65 VAPRIQEIQQKYKGD-QRKMQEEMLKLYQETGYNPASGCWPLLVQIPILFALYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDLAAADPTNIFT---------------LFGI---------LPFYLPGF 487 +++DL T FGI LP Sbjct: 124 VYVLGKTHQYVRDLVQGKAGYAITQTIINEAQKLGLDMHFFGINLAQKELIVLPILSAAT 183 Query: 488 MHVGIWPIIMSLSMF---IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 M + IW S F S A+ ++ + P++ F PAGL++YW+ Sbjct: 184 MFLSIWFSTNSQKRFNPQYAQSQSNAMAEGMNRTMMIFSPLMSYFIALQVPAGLVVYWTV 243 Query: 545 SNVISIVQQAV 555 +N+ SI+QQ + Sbjct: 244 TNLFSILQQFI 254 >gi|219112651|ref|XP_002178077.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410962|gb|EEC50891.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 425 Score = 181 bits (459), Expect = 3e-43, Method: Composition-based stats. Identities = 73/251 (29%), Positives = 133/251 (52%), Gaps = 23/251 (9%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLV-------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 D GWF F+ P+ +L+ ++L+ ++G+AI+L T+ +K++ FPL K Q ST Sbjct: 92 DSGWFGFLTIPIKLLLQAIHSLLLTVGLNTNSWGVAIVLLTILIKVVTFPLTKTQLESTN 151 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK-V 446 M+ +QP I EL+ K++ +P +V+ + + + Y+T+ INPLAGC P ++QIPVF +Y+ V Sbjct: 152 KMQAMQPAIKELQAKYQSNP-EVMNQKIAEFYQTNEINPLAGCLPSIVQIPVFIGLYRAV 210 Query: 447 ISISLEMRHAPFWGWIKDL----------AAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 + ++ + + ++ +L +AAD G+ P + I P+ Sbjct: 211 LELAQANKLDESFLFLPNLEGPTYGAEPGSAADWILKGWTDGVPSLGWPDTIAFLILPVF 270 Query: 497 MSLSMFIQMKMSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + +S ++ M++ P PA + IL +P++ + S PA L +YW +N+I+ Sbjct: 271 LVISQYLSMELMQPKTDDPAQQQSNAILKVLPIMIGWFSLSVPAALSVYWVINNIITTGT 330 Query: 553 QAVIMKMHGAE 563 +I E Sbjct: 331 SLIIRNSMSVE 341 >gi|312876167|ref|ZP_07736154.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor lactoaceticus 6A] gi|311796982|gb|EFR13324.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor lactoaceticus 6A] Length = 341 Score = 180 bits (458), Expect = 4e-43, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 34/251 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W F+A P+ L+ + Y+ + G++GIA++L T+ V+ L PL KQ ST+ M Sbjct: 5 WLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSKMAE 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P++ E+++K+K + +Q+ M++LY+ NP GCWP+L+Q+P+ F++Y V L Sbjct: 65 VAPRLQEIQQKYKND-QRKMQEEMLKLYQETGYNPAGGCWPLLIQLPILFSLYYVFQNPL 123 Query: 452 EMRHAPFWGWIKDLAAADPTNIFT---------------LFGI---------LPFYLPGF 487 ++KDL T FGI LP F Sbjct: 124 VYVLGKSHQYVKDLITGATGYNITQRIVDEAQKLGLDMHFFGINLAQKELIVLPILSAAF 183 Query: 488 MHVGIWPIIMSLSMF---IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 + I + S F S A+ ++ + P++ F P+GL++YW+ Sbjct: 184 SFLSILYSMNSQKKFNPQYSQSQSNAMAESINRSLMIFSPLMSYFIALQVPSGLVLYWTV 243 Query: 545 SNVISIVQQAV 555 +N+ +I+QQ + Sbjct: 244 TNLFTILQQFI 254 >gi|240254150|ref|NP_173858.5| ALB4 (ALBINA 4) [Arabidopsis thaliana] gi|223590242|sp|Q9FYL3|ALB31_ARATH RecName: Full=ALBINO3-like protein 1, chloroplastic; AltName: Full=Arabidopsis thaliana envelope membrane integrase; AltName: Full=Protein ALBINA 4; Short=Ath4; AltName: Full=Protein ARTEMIS; Flags: Precursor gi|91680591|emb|CAJ45566.1| Alb protein [Arabidopsis thaliana] gi|332192418|gb|AEE30539.1| ALBINO3-like protein 1 [Arabidopsis thaliana] Length = 499 Score = 180 bits (458), Expect = 4e-43, Method: Composition-based stats. Identities = 77/267 (28%), Positives = 125/267 (46%), Gaps = 25/267 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WF IA M ++ + + ++G AI+L TV VK FPL KKQ S MK+ Sbjct: 96 WFSGIANYMETILKVLKDGLSTVHVPYSYGFAIILLTVLVKAATFPLTKKQVESAMAMKS 155 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P+I ++E++ + +Q +LYK INPLAGC P L IPV+ +Y+ +S Sbjct: 156 LTPQIKAIQERYAGD-QEKIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 214 Query: 452 -EMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPIIMSL 499 E + WI LA + I LF G P P + + P+++ Sbjct: 215 DEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFIEGHPPLGWPDTLAYLVLPLLLVF 274 Query: 500 SMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 S ++ Q S PA K + +P++ + S P+GL +YW +N++S QQ Sbjct: 275 SQYLSIQIMQSSQSNDPAMKSSQAVTKLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQV 334 Query: 555 VIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + K GA+ + ++ + +K +Q Sbjct: 335 WLQKYGGAKNPV-EKFTNLVTKEDKTQ 360 >gi|83591337|ref|YP_431346.1| protein translocase subunit yidC [Moorella thermoacetica ATCC 39073] gi|83574251|gb|ABC20803.1| protein translocase subunit yidC [Moorella thermoacetica ATCC 39073] Length = 225 Score = 180 bits (458), Expect = 4e-43, Method: Composition-based stats. Identities = 66/237 (27%), Positives = 126/237 (53%), Gaps = 22/237 (9%) Query: 341 FIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + + YN+ + N+G+AI+L T+ VK++ +PL +Q S ++ +QPK Sbjct: 3 ILVDFLSQSIQFLYNITKAIGIPNYGLAIILFTIAVKVILYPLTYRQLRSMRRLQELQPK 62 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I EL++K+K +P Q Q+AM++LY+ +NPL GC P+L+Q+P+ +A++ + Sbjct: 63 IQELQKKYKSNP-QKAQQAMMELYQKEKVNPLGGCLPLLIQMPILYALFTSLRSFFN--- 118 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--AD 513 P +LA A+ I L P+ L P+++++ F Q K+S D Sbjct: 119 -PALNPTVNLAHANFLWISNLGQPDPYIL---------PVLVAVGTFFQQKVSMVSGGQD 168 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM-HGAEIGLIDR 569 + Q +L MP++ + +F AGL +YW +++ I++Q + + H + + + Sbjct: 169 QTQKTMLFVMPLIIGWMSRNFSAGLSLYWVTFSLMGILEQWLARRQPHLVKEEISAK 225 >gi|72163513|ref|YP_291170.1| hypothetical protein Tfu_3114 [Thermobifida fusca YX] gi|71917245|gb|AAZ57147.1| putative membrane protein [Thermobifida fusca YX] Length = 308 Score = 180 bits (458), Expect = 4e-43, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 121/258 (46%), Gaps = 42/258 (16%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 ++ + ++ + ++ + +G++I+L T+ V++L PL KQ + + Sbjct: 2 LDWLYNIVGQVLVWIHSGLSIFLDPDSGLAWGLSIVLLTILVRVLMIPLFVKQMNTQRKL 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++RE++K Q LQ+ I++Y+ NPL GC P+LLQ+PVFFA++ V+ Sbjct: 62 QELQPKLLKVRERYKNDK-QRLQQEQIKIYQESGTNPLMGCLPLLLQMPVFFALFNVLRQ 120 Query: 450 SLEMRHAPFWGWIKDLA-AADPTNIFT---------------LFGILPFYLPGFMHVGIW 493 E +G+ ++LA +A IF FG P + V Sbjct: 121 IAE--GEAKFGFTQELANSAQSALIFGAPIAAHFTSSADELAAFGADPIMAKVIIAVAC- 177 Query: 494 PIIMSLSMFIQMKMSP-----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 +IM + F+ M+ S P + Q +++ P F + P G++IYW Sbjct: 178 -VIMGTTTFLTMRQSMSRTLKQPGMEDNPMVQSQKIMMYIAPA-FGLFGLAMPVGVLIYW 235 Query: 543 SWSNVISIVQQAVIMKMH 560 SN+ ++ QQ + + Sbjct: 236 VTSNLWTMGQQHFLYRKF 253 >gi|295394850|ref|ZP_06805063.1| membrane protein OxaA [Brevibacterium mcbrellneri ATCC 49030] gi|294972183|gb|EFG48045.1| membrane protein OxaA [Brevibacterium mcbrellneri ATCC 49030] Length = 319 Score = 180 bits (458), Expect = 4e-43, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 40/276 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--------------NFGIAIMLTTVFVKLLFFPLAKKQY 383 W + P+ ++++ + AI T+ V+ + PL Q Sbjct: 3 WLGKLLLPIEWVVAWILAFFHMAFTALGMSPTAGWTWVAAIAGLTIVVRAVLIPLFVYQI 62 Query: 384 VSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 + M+ +QP++ EL++K+K Q + + L+K H NP A C P+L+Q+P+ Sbjct: 63 KAQRKMQLLQPEMMELQKKYKGKRDQFSRQQMAEEQQALFKKHGTNPFASCLPLLVQMPI 122 Query: 440 FFAIYKVISISLEMRHA---PFWGWIKDL-AAADPTNIFTLFGILPFY---LPGFMHVGI 492 FF++++VI + + + P G ++L + A +IF + F L + I Sbjct: 123 FFSLFRVIRNTEGIGNGDIPPIGGLTQELASQATHASIFGVELSDTFLQGDLGTKVLTAI 182 Query: 493 WPIIMSLSMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 +IM ++ FI + P + Q M+L MP++F FP GLI+YW Sbjct: 183 LIVIMGVTQFITQRQIMAKNMSEAAMNNPFMQQQKMLLYMMPIIFAVGGIYFPLGLIVYW 242 Query: 543 SWSNVISIVQQAVIMKMH-----GAEIGLIDRLRST 573 SNV ++VQQ ++++ AE LI R Sbjct: 243 LVSNVWTMVQQFIVIRNMPTPGSKAEKELIARRERQ 278 >gi|307105705|gb|EFN53953.1| hypothetical protein CHLNCDRAFT_25162 [Chlorella variabilis] Length = 423 Score = 180 bits (458), Expect = 4e-43, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 18/215 (8%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G AI+L TV VK+ +PL K+Q ST +M+ +QP++ EL+ K+ P + LQ ++ Sbjct: 123 SYGFAIILLTVLVKVATYPLTKQQVESTLSMQAMQPRVKELQAKYANDP-ERLQVETAKM 181 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLAAADPTNIFTLF 477 Y+T +NPLAGC P L IPVF +YK +S E + WI LA PT + Sbjct: 182 YQTAGVNPLAGCLPSLATIPVFIGLYKALSNVASEGLLTDGFFWIPSLAG--PTTVNGGL 239 Query: 478 GILPFYLPGFMHVG--------IWPIIMSLSMFIQMK------MSPPPADKGQAMILNWM 523 L + G +G + PI++ +S I K S PA + IL ++ Sbjct: 240 DWLFKWQDGAPLLGYGQTAAYLVLPILLVVSQAISQKVISPPQQSNDPAQQQTQAILKFL 299 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P++ + + P+GL +YW +N+I+ QQ + + Sbjct: 300 PLMIGWFSLNVPSGLTLYWFTNNLITTAQQLYLRR 334 >gi|289422592|ref|ZP_06424435.1| 60 kDa inner membrane insertion protein [Peptostreptococcus anaerobius 653-L] gi|289157164|gb|EFD05786.1| 60 kDa inner membrane insertion protein [Peptostreptococcus anaerobius 653-L] Length = 230 Score = 180 bits (458), Expect = 4e-43, Method: Composition-based stats. Identities = 67/234 (28%), Positives = 121/234 (51%), Gaps = 14/234 (5%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + +++ + VG++G+AI+L T+ VK++ PL KQ ST M I PKI E++ Sbjct: 4 IANALGLVLKAIHTAVGSYGLAIILFTILVKIILMPLMVKQTKSTFAMSEINPKIKEIQA 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K P+ + + +LYK +INPL+GC P+L+Q+P+ FA++ V + +G Sbjct: 64 KYKN-KPEKQNEEISKLYKESDINPLSGCLPMLVQLPILFALFWVFRDPM------KYGV 116 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--PADKGQAMI 519 + A D N+ + P ++ I+ +S ++ ++ P ++ Sbjct: 117 FETKQAFDAANV-GFVWVKSLTKPDYI----LAILSGVSAYVMQMVTVPKDQMQGSMKVM 171 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 MP + +F SFPA L +YW+ SN+ S++Q +I K ++ L++ Sbjct: 172 NYMMPALSLFWGFSFPAALTLYWTVSNLFSVLQHKIITKPLKDKLIREKELKAN 225 >gi|168063889|ref|XP_001783900.1| predicted protein [Physcomitrella patens subsp. patens] gi|162664583|gb|EDQ51297.1| predicted protein [Physcomitrella patens subsp. patens] Length = 321 Score = 180 bits (457), Expect = 5e-43, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 24/253 (9%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 D GW ++ + + +++ + + ++G AI+L T+ VK +PL KKQ ST Sbjct: 7 DGGWLGGVSNSLEIALTFLKDTIAKLGIPYSYGFAIILLTILVKAATYPLTKKQVESTLA 66 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+N+QPKI ++ +++ + +Q +LYK +NPLAGC P L +PV+ +Y+ +S Sbjct: 67 MQNLQPKIKAIQTRYQGD-QERIQLETARLYKQAGVNPLAGCLPTLATLPVWIGLYRALS 125 Query: 449 ISL-EMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPII 496 E + WI LA + I LF G + + P++ Sbjct: 126 NVANEGLLTEGFFWIPSLAGPTTIAARSSGSGISWLFPFVDGAPSLGWADTIAYLVLPVL 185 Query: 497 MSLSMFIQMKMSPPP-----ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + S ++ M++ PP A +IL ++P++ + S P+GL +YW +NV+S Sbjct: 186 LIGSQYVSMQIMQPPTTNDPAQNQSQLILKFLPLMIGYFSLSVPSGLSLYWLTNNVLSTA 245 Query: 552 QQAVIMKMHGAEI 564 QQ + ++ GA+ Sbjct: 246 QQVYLRQLGGAQP 258 >gi|284049399|ref|YP_003399738.1| membrane protein insertase, YidC/Oxa1 family [Acidaminococcus fermentans DSM 20731] gi|283953620|gb|ADB48423.1| membrane protein insertase, YidC/Oxa1 family [Acidaminococcus fermentans DSM 20731] Length = 207 Score = 180 bits (457), Expect = 5e-43, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 110/203 (54%), Gaps = 22/203 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 ++G+AI++ T+ +KL+ PL KQ ST M IQPK+ EL+ ++K L + M + Sbjct: 25 PSYGLAIIIMTILIKLILSPLTAKQIASTRAMSRIQPKMKELQARYKDDKV-TLNQKMSE 83 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK+ +NPLAGC P+L+Q+P+ I+ I + + W++ +A DP I Sbjct: 84 LYKSEGVNPLAGCLPLLIQMPIMIGIFYGIR-DFQYAGPSSFLWMQSIADPDPYYIL--- 139 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ-AMILNWMPVVFVFALSSFPA 536 PI+ +L+ FIQ K + PP+D Q ++L +MP+ + FPA Sbjct: 140 ----------------PILSALTTFIQSKQTMPPSDNPQGKIMLYFMPLFIGYISLKFPA 183 Query: 537 GLIIYWSWSNVISIVQQAVIMKM 559 GL++YW N++ I QQ ++ + Sbjct: 184 GLVLYWVVMNIMQIGQQFLLDRK 206 >gi|326202768|ref|ZP_08192635.1| membrane protein insertase, YidC/Oxa1 family [Clostridium papyrosolvens DSM 2782] gi|325986845|gb|EGD47674.1| membrane protein insertase, YidC/Oxa1 family [Clostridium papyrosolvens DSM 2782] Length = 280 Score = 180 bits (457), Expect = 5e-43, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 132/280 (47%), Gaps = 50/280 (17%) Query: 339 FYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 F I +P+ + + YN + N+G+A+++ T+ ++ PL KQY S+A M+ +QP + Sbjct: 2 FDVIIRPLGQFLYWIYNTIAFHNYGLALVIFTIIIRAAMIPLTLKQYKSSAEMQKVQPLL 61 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E++ K+ + L + M++LY+ H INP GC P+L+Q+P+ ++++ I+ L+ Sbjct: 62 QEIQRKYANDKAK-LNEEMMKLYQEHKINPAGGCLPLLIQMPILLSLWQAITKPLKYMLG 120 Query: 457 PFWGWIKDLAAAD---------------------------------PTNIFTL-FGILPF 482 +K+LA A P++ F + G +P Sbjct: 121 FTPEQLKNLAEASNIPINSAYSEINTITHFMSIGQGSKVGNLNMFFPSHGFGINLGDIPT 180 Query: 483 YL-------PGFMHVGIWPIIMSLSMFIQMKMSPP------PADKGQAMILNWMPVVFVF 529 + P + + + PII +++ ++ ++MS P A+ ++ P++ + Sbjct: 181 WHFNKIMSEPKYAVLLLLPIIATITTYLSVRMSMPKATSDKAANPMGNSMMYVSPIMTLL 240 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 FPAGL +YW NV +IVQQ + K + + + Sbjct: 241 FSFQFPAGLALYWITGNVFAIVQQYYVNKYVLKKKEEVSK 280 >gi|217033106|ref|ZP_03438570.1| hypothetical protein HPB128_27g13 [Helicobacter pylori B128] gi|216945179|gb|EEC23870.1| hypothetical protein HPB128_27g13 [Helicobacter pylori B128] Length = 173 Score = 180 bits (457), Expect = 5e-43, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 111/192 (57%), Gaps = 21/192 (10%) Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 VS +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFA Sbjct: 1 MVSMQKLKELAPKMKELQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFA 59 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 IY+V+ ++E++ + + WI DL+ DP I P++M SM+ Sbjct: 60 IYRVLYNAVELKSSEWILWIHDLSIMDPYFIL-------------------PLLMGASMY 100 Query: 503 IQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++P D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 101 WHQSVTPNTMTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILE 160 Query: 562 AEIGLIDRLRST 573 + + + + Sbjct: 161 NKKRMHAQNKKE 172 >gi|332672290|ref|YP_004455298.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas fimi ATCC 484] gi|332341328|gb|AEE47911.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas fimi ATCC 484] Length = 371 Score = 180 bits (457), Expect = 6e-43, Method: Composition-based stats. Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 39/274 (14%) Query: 338 WFYFIAKPMF----MLMSYFYNLVGN----------FGIAIMLTTVFVKLLFFPLAKKQY 383 WF + P+ +M F+ L + ++I+ V +++L PL KQ Sbjct: 3 WFDGLLAPIMTVVAWIMVQFHALFTTLGLNPESGAAWALSIVGLVVVIRILLIPLFFKQI 62 Query: 384 VSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 ++ M+ + P++ +++K+K + + + + ++LY+ H NP A C PILLQ P+ Sbjct: 63 KASRGMQMLAPEMQAIQKKYKGKTDPASREAMSRETMELYRKHGTNPFASCLPILLQSPI 122 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPT-----NIFTLFGILPFYLPG-FMHVGIW 493 FFA+++V+ ++ A I ++A IF F G H+ + Sbjct: 123 FFALFRVLYQLPQIA-AGDIKPIGPMSAELAAQAEAATIFGAPLSGTFMQAGDNWHIRVV 181 Query: 494 PIIMSLSM---------FIQMKMSPP-----PADKGQAMILNWMPVVFVFALSSFPAGLI 539 +++ ++M + MK PP P + Q ++L +P+VF F+ +FP G++ Sbjct: 182 TVVLIIAMSATTFLTQRQLTMKNMPPAALQGPMAQQQKVLLYVLPLVFAFSGVNFPIGVL 241 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 IYW+ +N+ S+ QQ ++ A +R Sbjct: 242 IYWTTTNLWSMGQQFYTIRRMPAPGSEAERAMKE 275 >gi|302393077|ref|YP_003828897.1| membrane protein insertase, YidC/Oxa1 family [Acetohalobium arabaticum DSM 5501] gi|302205154|gb|ADL13832.1| membrane protein insertase, YidC/Oxa1 family [Acetohalobium arabaticum DSM 5501] Length = 224 Score = 180 bits (457), Expect = 6e-43, Method: Composition-based stats. Identities = 61/220 (27%), Positives = 115/220 (52%), Gaps = 21/220 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F ++ M + +FY ++G++I+L T+ +++L FPL KQ S M+ +QPK++E Sbjct: 16 FGWLGGLMTGSLDFFYGFTNSYGLSIILLTLAIRVLLFPLVAKQTRSMKAMQELQPKMEE 75 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+E++ Q QK +++LY+ H +NP AGC P+L+Q+P+ A++ I ++ Sbjct: 76 LKEEYGDDQQQYQQK-VMELYQEHKVNPAAGCLPLLVQMPILIALFHSIRGFEALKQTS- 133 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + WI ++A D + V + ++M +Q KMS G Sbjct: 134 FLWISNIAQPD-----------------LVLVILTGLVMFGQSMVQQKMSGNAG--GNNK 174 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ +MP++ V PA +++YW SN++ + QQ + + Sbjct: 175 MMMFMPLLIVVIGFRLPAAVLLYWFTSNLVMVAQQYFLYR 214 >gi|65317011|ref|ZP_00389970.1| COG0706: Preprotein translocase subunit YidC [Bacillus anthracis str. A2012] Length = 262 Score = 180 bits (457), Expect = 6e-43, Method: Composition-based stats. Identities = 70/238 (29%), Positives = 121/238 (50%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + + + GIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WDHYFVYPISFMIQFVAHHIPGASXGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++ + + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 99 LQKLKQXYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + +L ADP +I PII +L+ FIQMK+ Sbjct: 159 EEIRTST--FLWVNLGHADPYHIL-------------------PIIAALTTFIQMKVFQS 197 Query: 508 --SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + M MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 198 NSTSGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMERE 255 >gi|310779691|ref|YP_003968024.1| protein translocase subunit yidC [Ilyobacter polytropus DSM 2926] gi|309749014|gb|ADO83676.1| protein translocase subunit yidC [Ilyobacter polytropus DSM 2926] Length = 208 Score = 180 bits (456), Expect = 7e-43, Method: Composition-based stats. Identities = 74/223 (33%), Positives = 120/223 (53%), Gaps = 17/223 (7%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 FI P+ ++ Y Y ++GNFG++I+ TV +KLL PL KQ S MK IQP+ID++ Sbjct: 2 SFITVPLEQIILYLYKIIGNFGLSIIGITVLIKLLLLPLTLKQDKSMKAMKRIQPEIDKI 61 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +EK+K Q+L + ++LY+ + +NP AGC P+L+Q+P+ +A++ V +R AP Sbjct: 62 KEKYKNDK-QLLNEKTMELYQKYKVNPAAGCLPMLVQLPILWALFAV------LRKAPVD 114 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 G I + + F L P +++ P++ L F Q K+ ++ + Sbjct: 115 GGIVPVEST--------FLWLTLVNPDPLYI--LPVLNGLVAFAQQKIMGSGSNPQMKNM 164 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + P++ VF PAGL IYW S+ I+QQ +MK Sbjct: 165 MYMFPIMMVFISYKMPAGLQIYWLTSSAAGILQQYYVMKRGDE 207 >gi|288916713|ref|ZP_06411088.1| 60 kDa inner membrane insertion protein [Frankia sp. EUN1f] gi|288351968|gb|EFC86170.1| 60 kDa inner membrane insertion protein [Frankia sp. EUN1f] Length = 476 Score = 180 bits (456), Expect = 7e-43, Method: Composition-based stats. Identities = 69/253 (27%), Positives = 116/253 (45%), Gaps = 37/253 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +F+ P+F S+F + ++++L + V++L FPL KQ S M+ +QP+I Sbjct: 15 FFHKGFGPIFGRDSFFA-----WALSVILLVICVRILIFPLFVKQVKSQRTMQMMQPRIK 69 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E++EK+ Q +Q +++L K H NPL GC PILLQIP+F +++ V + M P Sbjct: 70 EIKEKYGHDKQQ-MQLEIMKLQKEHG-NPLLGCLPILLQIPLFISLFHVFTHLAPMNEGP 127 Query: 458 ----FWGWIKDLAAADPTNIFT--LFGI------------LPFYLPGFMHVGIWPI---- 495 W L+A I T L+GI L F MH I + Sbjct: 128 GGSLVWRPRVGLSADQVEQIATAKLWGISLSSKFTSSPDFLDFLGANGMHTKILAVVLIV 187 Query: 496 IMSLSMFIQMKMSPP-------PADKG-QAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 M ++ F+ + P Q ++L P++ FP +++YW +N+ Sbjct: 188 TMGVTTFLTQRQIMNRAGTAVDPQQAMVQKILLYGSPLMLAIFGFRFPIAVLLYWLTTNL 247 Query: 548 ISIVQQAVIMKMH 560 S+ QQ +++ Sbjct: 248 WSLGQQFFVIRKM 260 >gi|295707340|ref|YP_003600415.1| membrane protein OxaA [Bacillus megaterium DSM 319] gi|294804999|gb|ADF42065.1| membrane protein OxaA [Bacillus megaterium DSM 319] Length = 254 Score = 179 bits (455), Expect = 9e-43, Method: Composition-based stats. Identities = 70/226 (30%), Positives = 120/226 (53%), Gaps = 27/226 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++ P+ ++++Y + ++G+AI++ T+ ++LL PL KQ +T M+ +QP++ Sbjct: 36 WNEYVVYPLSLVITYLAEVFKSYGVAIIVVTILIRLLILPLMIKQMRNTKAMQTLQPEMQ 95 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +L+EK+ Q LQK + L++T+ +NPLAGC+PIL+Q+P+ I+ I+ + E+ Sbjct: 96 KLKEKYSSKDAQTQQQLQKETMALFQTYGVNPLAGCFPILIQMPILIGIFHAITRTSEIA 155 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---P 511 + F + DL A DP I PI+ ++ FIQ KM Sbjct: 156 NNSFLWF--DLGARDPLFIL-------------------PIVAGITTFIQQKMMMAGNAN 194 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ V +FPA L +YW N+ I+Q I Sbjct: 195 QNPQMAMMLWVMPIMIVVFAINFPAALSLYWVVGNLFMIIQTYFIK 240 >gi|167462794|ref|ZP_02327883.1| 60 kDa inner membrane insertion protein [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381370|ref|ZP_08055373.1| OxaA-like protein precursor [Paenibacillus larvae subsp. larvae B-3650] gi|321154946|gb|EFX47217.1| OxaA-like protein precursor [Paenibacillus larvae subsp. larvae B-3650] Length = 271 Score = 179 bits (455), Expect = 9e-43, Method: Composition-based stats. Identities = 64/236 (27%), Positives = 119/236 (50%), Gaps = 24/236 (10%) Query: 332 MLIDWGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 ++ G+F + P+ + +F + GN +GI+I++ T+ ++ + PL KQY S+ M Sbjct: 29 DPVNGGFFTKYFIYPLSWSLDWFAGVFGNSYGISILILTIIIRFIVLPLTLKQYRSSKRM 88 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + IQP+I +L++K+K +P Q Q+ ++L++ H +NPLAGC P+L+Q+P+ A+Y+ I Sbjct: 89 QEIQPEIKKLQQKYKDNP-QKQQEETMKLFQQHGVNPLAGCLPLLIQMPILIALYQAIMR 147 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + +R F L A D I P+I +++ ++Q K Sbjct: 148 NDAIREHTFLWL--QLGAKDDYYIL-------------------PLIAAITTYLQQKTMS 186 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 ++ +L PV+ SF + L +YW +SN+ +I Q + + Sbjct: 187 AQMNQQMKSMLFIFPVLIFVMSMSFASALPLYWIYSNLFTIAQNYFLYGRDNRKKK 242 >gi|294501989|ref|YP_003565689.1| membrane protein OxaA [Bacillus megaterium QM B1551] gi|294351926|gb|ADE72255.1| membrane protein OxaA [Bacillus megaterium QM B1551] Length = 254 Score = 179 bits (455), Expect = 1e-42, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 120/226 (53%), Gaps = 27/226 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++ P+ ++++Y + ++G+AI++ T+ ++LL PL KQ +T M+ +QP++ Sbjct: 36 WNEYVVYPLSLVITYLAEVFKSYGVAIIVVTILIRLLILPLMIKQMRNTKAMQTLQPEMQ 95 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +L+EK+ Q LQK + L++T+ +NPLAGC+PIL+Q+P+ I+ I+ + E+ Sbjct: 96 KLKEKYSSKDAQTQQQLQKETMALFQTYGVNPLAGCFPILIQMPILIGIFHAITRTSEIA 155 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---P 511 + F + DL A DP I P++ ++ FIQ KM Sbjct: 156 NNSFLWF--DLGARDPLFIL-------------------PVVAGITTFIQQKMMMAGNAN 194 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ V +FPA L +YW N+ I+Q I Sbjct: 195 QNPQMAMMLWVMPIMIVVFAINFPAALSLYWVVGNLFMIIQTYFIK 240 >gi|158319055|ref|YP_001511563.1| 60 kDa inner membrane insertion protein [Frankia sp. EAN1pec] gi|158114460|gb|ABW16657.1| 60 kDa inner membrane insertion protein [Frankia sp. EAN1pec] Length = 461 Score = 179 bits (454), Expect = 1e-42, Method: Composition-based stats. Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 36/252 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +F+ P+F S+F + +++L + V++L FPL KQ S M+ +QP+I Sbjct: 15 FFHKGFGPIFGADSFFA-----WAFSVVLLVICVRILIFPLFVKQVKSQRTMQMMQPRIK 69 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E++EK+ Q +Q +++L K H NPL GC PILLQIP+F +++ V + M P Sbjct: 70 EIKEKYGHDKQQ-MQLEIMKLQKEHG-NPLLGCLPILLQIPLFISLFHVFTHLAPMNEGP 127 Query: 458 ----FWGWIKDLAAADPTNIFT--LFGI------------LPFYLPGFMHVGIWPI---- 495 W L+A I + L+GI L F H I + Sbjct: 128 GGSLVWRPRVGLSADQVEQIASAKLWGISLSNSFGSSQESLDFLGANGTHAKILAVVLIV 187 Query: 496 IMSLSMFIQMKMSPP---PADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 +M + F + P D QAM+ L P++ FP +++YW +N+ Sbjct: 188 LMGATTFFTQRQIMARTGPVDPQQAMVQKILLYGSPLMLAIFGFRFPIAVLLYWLTTNLW 247 Query: 549 SIVQQAVIMKMH 560 S+ QQ ++K Sbjct: 248 SMGQQFFVIKKM 259 >gi|111226214|ref|YP_717008.1| putative membrane protein oxaA [Frankia alni ACN14a] gi|111153746|emb|CAJ65504.1| putative Membrane protein oxaA [Frankia alni ACN14a] Length = 470 Score = 179 bits (454), Expect = 1e-42, Method: Composition-based stats. Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 36/252 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +F+ P+F S+F + +++L + V++L FPL KQ S M+ +QP+I Sbjct: 15 FFHKGFAPIFGADSFFA-----WAFSVVLLVIAVRVLIFPLFVKQVKSQRTMQMMQPRIK 69 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+REK+ P+ +Q+ ++ L K H NPL GC PILLQIP+F +++ V + M P Sbjct: 70 EIREKYGHDKPR-MQQEIMALQKEHG-NPLLGCLPILLQIPLFISLFHVFTHLAPMNEGP 127 Query: 458 F----WGWIKDLAAADPTNIFT--LFGI------------LPFYLPGFMHVGIWP----I 495 W L+A I + +FGI + F HV I + Sbjct: 128 NGALVWRPRVGLSADQVEQIASAKVFGISLASEFGSDSDFVHFLGVNSTHVKILAVVLIV 187 Query: 496 IMSLSMFIQMKMSPP---PADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 +M L+ F+ + P D QA++ L P++ FP +++YW +N+ Sbjct: 188 LMGLTTFMTQRQIMARTGPVDPQQAIVQKVLLYGSPLMLAIFGFRFPIAVLLYWLTTNLW 247 Query: 549 SIVQQAVIMKMH 560 S+ QQ ++K Sbjct: 248 SMGQQFFVIKRM 259 >gi|331702707|ref|YP_004399666.1| membrane protein oxaA [Lactobacillus buchneri NRRL B-30929] gi|329130050|gb|AEB74603.1| Membrane protein oxaA [Lactobacillus buchneri NRRL B-30929] Length = 278 Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 22/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + N+G+ I++ T+ V+++ PL Q S + +QP++ Sbjct: 37 WDGWVVLNFSRAIIWLSKFFSDNYGMGIIIFTILVRIVILPLMIYQTRSMRKTQEVQPQL 96 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ Q LQ +LY INPLAGC P+++Q+P+ FA+Y+ I + + Sbjct: 97 KALQKKYSSRDAETVQKLQAEQKKLYAEAGINPLAGCLPLIVQMPILFALYQAIWRTHIL 156 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R F+ L DP + + L ++ + L+M Q P ++ Sbjct: 157 RSGTFFWL--QLGHPDPYFVLPILAALFTFISSW-----------LAMKGQ-----PESN 198 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 M+ MP + S P+ L +YW +N + Q VI ++ R Sbjct: 199 SMTTMMTVGMPFFILIMAISLPSALSLYWVITNAFQVGQTLVIQNPWKIRRERENKQREE 258 Query: 574 FSK 576 K Sbjct: 259 REK 261 >gi|315925607|ref|ZP_07921817.1| stage III sporulation protein J [Pseudoramibacter alactolyticus ATCC 23263] gi|315621148|gb|EFV01119.1| stage III sporulation protein J [Pseudoramibacter alactolyticus ATCC 23263] Length = 296 Score = 179 bits (453), Expect = 2e-42, Method: Composition-based stats. Identities = 57/234 (24%), Positives = 114/234 (48%), Gaps = 21/234 (8%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + ++ YNLV ++G A++L T+ VK + PL KQ S M+ +QP+++ L+ Sbjct: 3 ILYQAFGFVLYQIYNLVKDYGFAVILFTIIVKTIILPLNIKQTNSMREMQAVQPELNNLQ 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-- 458 +K+K +P + L ++LYK +N+NP+AGC P+L+Q+P+ + ++ + + Sbjct: 63 KKYKNNP-EKLNAETMKLYKLYNVNPMAGCLPLLIQLPIIWGLFGALRSPAKYVFTNGNL 121 Query: 459 ------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + WI +L DP + + ++ ++ + M A Sbjct: 122 SALRAGFYWIPNLGKPDPYFVLPILCVVLTFITQWY------------MMRFQDDGNKAA 169 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 Q ++L MP++ + PAG+ +YW N + VQQ ++M+ ++ + Sbjct: 170 QSSQKVMLYVMPLMIGWFAVKMPAGVALYWVVQNAYTFVQQFLVMRKPVEKVSI 223 >gi|291294533|ref|YP_003505931.1| 60 kDa inner membrane insertion protein [Meiothermus ruber DSM 1279] gi|290469492|gb|ADD26911.1| 60 kDa inner membrane insertion protein [Meiothermus ruber DSM 1279] Length = 459 Score = 179 bits (453), Expect = 2e-42, Method: Composition-based stats. Identities = 79/276 (28%), Positives = 134/276 (48%), Gaps = 29/276 (10%) Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + I + + + ++ GA E + E +P WG I+ + Sbjct: 203 TQLNGAGIAEISVPAGSLNLKVYGGANELVRL-SVENFYELPGVFQPNIWG---QISLGL 258 Query: 347 FMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 L+ + LVG ++ +AI+L T+ ++LL +PL +QY S A M+ IQP + +++EK+K Sbjct: 259 LWLLEEAHRLVGGSWVLAIVLVTILIRLLMWPLMHQQYKSMAEMQKIQPLLKKIQEKYKD 318 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + + Q+ M++LY+ H INPL GC+P+LLQ+P+ F +YK I + + WI DL Sbjct: 319 NK-EKQQEEMMKLYQEHKINPLGGCFPLLLQMPILFLMYK---IMVGYEFGQGFLWIPDL 374 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 A DP + L I + +S + + +G + Sbjct: 375 ALPDPIYVLPLIYIAVIF---------------ISTLLTSAGNKDAIRQG-----IIFNL 414 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 VF F L SFPAG+ +Y+++ ++ I QQ I K G Sbjct: 415 VFAFILFSFPAGVNLYYTFFTILGIGQQFYINKQLG 450 >gi|255657635|ref|ZP_05403044.1| putative sporulation membrane protein [Clostridium difficile QCD-23m63] gi|296452684|ref|ZP_06894375.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP08] gi|296880064|ref|ZP_06904033.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP07] gi|296258466|gb|EFH05370.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP08] gi|296428931|gb|EFH14809.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP07] Length = 235 Score = 179 bits (453), Expect = 2e-42, Method: Composition-based stats. Identities = 65/241 (26%), Positives = 116/241 (48%), Gaps = 14/241 (5%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 I + +++ + V ++GI+I+L T+ VK++ PL KQ ST M++IQP+I E++ Sbjct: 3 IIGNFLGLILKVIFEFVNHYGISIILFTILVKIILLPLTIKQTKSTKAMQDIQPRIKEIQ 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K P+ + +++LY INPL+GC P+L+Q P+ ++ V+ + + Sbjct: 63 EKYKN-KPEKQNEEIVKLYGEAKINPLSGCLPLLIQFPILIGLFSVLREPVA---HGVFA 118 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPADKGQAMI 519 AAD ++ P Y+ + S ++ K M+P +G + Sbjct: 119 NKAAFLAADNGFLWIKSLTSPDYI--------LAVFSGASAYVMQKVMTPKDQLQGSMKV 170 Query: 520 L-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 + M + + FPAGL +YW+ SN+ SI Q +IM A++ + K Sbjct: 171 MTYVMAGMSFYWGFIFPAGLTLYWTVSNLFSIAQYYLIMNPLKAKLAANSKEEKVNEKKP 230 Query: 579 N 579 Sbjct: 231 K 231 >gi|289523248|ref|ZP_06440102.1| membrane protein insertase, YidC/Oxa1 family [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503791|gb|EFD24955.1| membrane protein insertase, YidC/Oxa1 family [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 256 Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 136/256 (53%), Gaps = 22/256 (8%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 M ++++FY + ++GIAI+L T+ +++L +PL+ KQ VS M+ IQP++ L+EK+K Sbjct: 1 MLGVLNFFYEISNSYGIAIILLTILIRILLYPLSHKQLVSMKKMQQIQPRLKTLQEKYKD 60 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS---------LEMRHA 456 Q L + +++LYK + +NP AGC P+L+Q+P+ +++VI + ++H+ Sbjct: 61 D-RQKLNQEVMKLYKEYGVNPAAGCLPLLVQLPILILLFRVIMNYDFGEEFFVGVSLKHS 119 Query: 457 PFWGWIKDLAAADPTN--IFTLFGILPFYLPGFMHVGIWPIIM------SLSMFIQMKMS 508 + L A++ I T+ G + G ++ GI+ + + Q KM+ Sbjct: 120 LLALMSQALGASETARAGITTVLGAIASNPAGLLNFGIYGGTLLLWLGVGFVTWFQQKMT 179 Query: 509 PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM---HGAEI 564 A Q + +MP+ +F S P G+++YW S++I +VQQA + + GA+ Sbjct: 180 TSSAASEQMAFMGWFMPLFMMFICLSLPGGVLLYWGVSSLIGVVQQAWVQRKALVEGAKK 239 Query: 565 GLIDRLRSTFSKNYNS 580 ++ + + ++ Sbjct: 240 PVLYKEKPRSAEKPKD 255 >gi|251800247|ref|YP_003014978.1| hypothetical protein Pjdr2_6289 [Paenibacillus sp. JDR-2] gi|247547873|gb|ACT04892.1| 60 kDa inner membrane insertion protein [Paenibacillus sp. JDR-2] Length = 258 Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats. Identities = 67/222 (30%), Positives = 111/222 (50%), Gaps = 28/222 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 Y+ A + +F G++G+AI+L T+ V+ PL KQY S+ M+ IQP++ E Sbjct: 49 VYYFALTLDKFADWFN---GSYGLAILLITIIVRTAILPLTLKQYRSSKAMQAIQPQMAE 105 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +++K K +P Q Q+ ++L++ + +NP+AGC P+L+Q+PVF A+Y I + E+R F Sbjct: 106 IKKKHKDNP-QKQQEETMKLFQANKVNPMAGCLPLLVQMPVFMALYNSIYWNPEVRTHEF 164 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKG 515 G L P PII + + F+Q KM G Sbjct: 165 LGL--QLGEPGPWYFL-------------------PIIAAATTFVQSKMMQKQQTQTMPG 203 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +L PV+ +FP+ L +YW +SN+ +I+Q + Sbjct: 204 MGAMLMIFPVLIFVMALNFPSALPLYWIFSNLYTIIQNYFLY 245 >gi|126701305|ref|YP_001090202.1| putative sporulation membrane protein [Clostridium difficile 630] gi|254977339|ref|ZP_05273811.1| putative sporulation membrane protein [Clostridium difficile QCD-66c26] gi|255102896|ref|ZP_05331873.1| putative sporulation membrane protein [Clostridium difficile QCD-63q42] gi|255308716|ref|ZP_05352887.1| putative sporulation membrane protein [Clostridium difficile ATCC 43255] gi|255316423|ref|ZP_05358006.1| putative sporulation membrane protein [Clostridium difficile QCD-76w55] gi|255519083|ref|ZP_05386759.1| putative sporulation membrane protein [Clostridium difficile QCD-97b34] gi|255652266|ref|ZP_05399168.1| putative sporulation membrane protein [Clostridium difficile QCD-37x79] gi|260685220|ref|YP_003216505.1| putative sporulation membrane protein [Clostridium difficile CD196] gi|260688879|ref|YP_003220013.1| putative sporulation membrane protein [Clostridium difficile R20291] gi|306521981|ref|ZP_07408328.1| putative sporulation membrane protein [Clostridium difficile QCD-32g58] gi|115252742|emb|CAJ70587.1| Sporulation membrane protein SpoIIIJ [Clostridium difficile] gi|260211383|emb|CBA67040.1| putative sporulation membrane protein [Clostridium difficile CD196] gi|260214896|emb|CBE07703.1| putative sporulation membrane protein [Clostridium difficile R20291] Length = 235 Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats. Identities = 65/241 (26%), Positives = 116/241 (48%), Gaps = 14/241 (5%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 I + +++ + V ++GI+I+L T+ VK++ PL KQ ST M++IQP+I E++ Sbjct: 3 IIGNFLGLILKVIFEFVNHYGISIILFTILVKIILLPLTIKQTKSTKAMQDIQPRIKEIQ 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K P+ + +++LY INPL+GC P+L+Q P+ ++ V+ + + Sbjct: 63 EKYKN-KPEKQNEEIVKLYGEAKINPLSGCLPLLIQFPILIGLFSVLREPVA---HGVFA 118 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPADKGQAMI 519 AAD ++ P Y+ + S ++ K M+P +G + Sbjct: 119 NKAAFLAADNGFLWIKSLTSPDYV--------LAVFSGASAYVMQKVMTPKDQLQGSMKV 170 Query: 520 L-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 + M + + FPAGL +YW+ SN+ SI Q +IM A++ + K Sbjct: 171 MTYVMAGMSFYWGFIFPAGLTLYWTVSNLFSIAQYYLIMNPLKAKLAANSKEEKVNEKKP 230 Query: 579 N 579 Sbjct: 231 K 231 >gi|227508124|ref|ZP_03938173.1| inner membrane insertion protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227511149|ref|ZP_03941198.1| inner membrane insertion protein [Lactobacillus buchneri ATCC 11577] gi|227523336|ref|ZP_03953385.1| inner membrane insertion protein [Lactobacillus hilgardii ATCC 8290] gi|227085631|gb|EEI20943.1| inner membrane insertion protein [Lactobacillus buchneri ATCC 11577] gi|227089527|gb|EEI24839.1| inner membrane insertion protein [Lactobacillus hilgardii ATCC 8290] gi|227192353|gb|EEI72420.1| inner membrane insertion protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 278 Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 22/248 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + N+G+ I++ T+ V+++ PL Q S + +QP++ Sbjct: 37 WDGWVVLNFSRAIIWLSKFFSDNYGMGIIIFTILVRIVILPLMIYQTRSMRKTQEVQPQL 96 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ Q LQ +LY INPLAGC P+++Q+P+ FA+Y+ I + + Sbjct: 97 KALQKKYSSRDAETMQKLQAEQKKLYAEAGINPLAGCLPMIVQMPILFALYQAIWRTDIL 156 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R F+ L DP + + L ++ + L+M Q P ++ Sbjct: 157 RSGTFFWL--QLGHPDPIFVLPVLAALFTFISSW-----------LAMKGQ-----PESN 198 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 M+ MP+ + S P+ L +YW +N + Q VI + + Sbjct: 199 SMTTMMTIGMPIFILIMAVSLPSALSLYWVITNAFQVGQTLVIQNPWKIRREREQKQKEE 258 Query: 574 FSKNYNSQ 581 Q Sbjct: 259 REHKRAVQ 266 >gi|257878643|ref|ZP_05658296.1| inner membrane protein [Enterococcus faecium 1,230,933] gi|257881309|ref|ZP_05660962.1| inner membrane protein [Enterococcus faecium 1,231,502] gi|257885584|ref|ZP_05665237.1| inner membrane protein [Enterococcus faecium 1,231,501] gi|257890526|ref|ZP_05670179.1| inner membrane protein [Enterococcus faecium 1,231,410] gi|257893101|ref|ZP_05672754.1| inner membrane protein [Enterococcus faecium 1,231,408] gi|258615273|ref|ZP_05713043.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Enterococcus faecium DO] gi|260558224|ref|ZP_05830420.1| inner membrane protein [Enterococcus faecium C68] gi|261206914|ref|ZP_05921603.1| inner membrane protein [Enterococcus faecium TC 6] gi|289566509|ref|ZP_06446933.1| preprotein translocase YidC subunit [Enterococcus faecium D344SRF] gi|293553544|ref|ZP_06674171.1| membrane protein OxaA 1 [Enterococcus faecium E1039] gi|293563248|ref|ZP_06677700.1| membrane protein OxaA 1 [Enterococcus faecium E1162] gi|293569162|ref|ZP_06680468.1| membrane protein OxaA 1 [Enterococcus faecium E1071] gi|294616662|ref|ZP_06696433.1| membrane protein OxaA 1 [Enterococcus faecium E1636] gi|294619742|ref|ZP_06699147.1| membrane protein OxaA 1 [Enterococcus faecium E1679] gi|294623756|ref|ZP_06702584.1| membrane protein OxaA 1 [Enterococcus faecium U0317] gi|314940134|ref|ZP_07847314.1| putative stage III sporulation protein J [Enterococcus faecium TX0133a04] gi|314943035|ref|ZP_07849839.1| putative stage III sporulation protein J [Enterococcus faecium TX0133C] gi|314948153|ref|ZP_07851549.1| putative stage III sporulation protein J [Enterococcus faecium TX0082] gi|314953433|ref|ZP_07856351.1| putative stage III sporulation protein J [Enterococcus faecium TX0133A] gi|314993828|ref|ZP_07859164.1| putative stage III sporulation protein J [Enterococcus faecium TX0133B] gi|314998147|ref|ZP_07863029.1| putative stage III sporulation protein J [Enterococcus faecium TX0133a01] gi|257812871|gb|EEV41629.1| inner membrane protein [Enterococcus faecium 1,230,933] gi|257816967|gb|EEV44295.1| inner membrane protein [Enterococcus faecium 1,231,502] gi|257821440|gb|EEV48570.1| inner membrane protein [Enterococcus faecium 1,231,501] gi|257826886|gb|EEV53512.1| inner membrane protein [Enterococcus faecium 1,231,410] gi|257829480|gb|EEV56087.1| inner membrane protein [Enterococcus faecium 1,231,408] gi|260075398|gb|EEW63704.1| inner membrane protein [Enterococcus faecium C68] gi|260078542|gb|EEW66244.1| inner membrane protein [Enterococcus faecium TC 6] gi|289161718|gb|EFD09594.1| preprotein translocase YidC subunit [Enterococcus faecium D344SRF] gi|291588131|gb|EFF19973.1| membrane protein OxaA 1 [Enterococcus faecium E1071] gi|291590482|gb|EFF22220.1| membrane protein OxaA 1 [Enterococcus faecium E1636] gi|291594012|gb|EFF25481.1| membrane protein OxaA 1 [Enterococcus faecium E1679] gi|291596710|gb|EFF27933.1| membrane protein OxaA 1 [Enterococcus faecium U0317] gi|291602299|gb|EFF32524.1| membrane protein OxaA 1 [Enterococcus faecium E1039] gi|291604787|gb|EFF34269.1| membrane protein OxaA 1 [Enterococcus faecium E1162] gi|313587859|gb|EFR66704.1| putative stage III sporulation protein J [Enterococcus faecium TX0133a01] gi|313591719|gb|EFR70564.1| putative stage III sporulation protein J [Enterococcus faecium TX0133B] gi|313594536|gb|EFR73381.1| putative stage III sporulation protein J [Enterococcus faecium TX0133A] gi|313598235|gb|EFR77080.1| putative stage III sporulation protein J [Enterococcus faecium TX0133C] gi|313640639|gb|EFS05219.1| putative stage III sporulation protein J [Enterococcus faecium TX0133a04] gi|313645407|gb|EFS09987.1| putative stage III sporulation protein J [Enterococcus faecium TX0082] Length = 272 Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats. Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 23/223 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + GN GI I+L T+ ++++ PL Q S + +QPK+ Sbjct: 36 WDRYIVYYFAEAIKALS--FGNAGIGIILFTLIIRVILLPLMHFQTKSMRKTQELQPKLK 93 Query: 398 ELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++++ P+ L++ +LY + +NP AGC P+L+Q+P+ A+++ IS E++ Sbjct: 94 ALQQQYSSRDPETQSKLREEQQRLYAENGVNPYAGCLPLLVQMPILMALWQSISRVPELK 153 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 +L ADPT I + + + ++ MS ++ Sbjct: 154 QG--HFLWLNLGNADPTFILPILAAIFTFASTYL----------------SSMSQIESNA 195 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ MPV+ + + +GL +YW SN +VQ +I Sbjct: 196 SMKIMNFVMPVMILVMGVNLASGLSLYWVVSNAFQVVQTLLIN 238 >gi|256826456|ref|YP_003150416.1| preprotein translocase subunit YidC [Kytococcus sedentarius DSM 20547] gi|256689849|gb|ACV07651.1| preprotein translocase subunit YidC [Kytococcus sedentarius DSM 20547] Length = 350 Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 111/221 (50%), Gaps = 22/221 (9%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAM 415 + ++I+ + V+LL PL KQ S+ M+ + P++ +++ K+K Q Q Sbjct: 36 WVLSILALVILVRLLMIPLVVKQIHSSRKMQLLAPELKKIQAKYKGKKDQASMQRQQAET 95 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA---PFWGWIKDL-AAADPT 471 ++LYK + NP A C PIL+QIP+ F +++V++ E+ P +DL ++ D Sbjct: 96 MELYKNNGTNPFASCLPILVQIPILFGLFRVLNGVDEIAAGTKDPIGFMTRDLASSFDAA 155 Query: 472 NIFTLFGILPFY----LPGFMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQA 517 IF F L G + + ++M++ F+ MKM P + Q Sbjct: 156 TIFGAELSDSFLHDSDLTGKIVSVVLILLMTVFTFVSMKMMMDKNMPDSAKEGPMAQSQT 215 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++L +PV+ +FP G+++YW+++N+ S QQ +++ Sbjct: 216 IMLYALPVILAVTGVNFPIGVLVYWTFTNLWSYFQQLYVIR 256 >gi|9886727|emb|CAC04249.1| PPF-1 protein [Pisum sativum] Length = 442 Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 24/256 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M ++ + + +G AI+L T VK PL K+Q ST M+ Sbjct: 89 GWFGFISDGMEFVLKVLKGGLSSVHVPYSYGFAIILLTGIVKAATLPLTKQQVESTLAMQ 148 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N QPKI ++E++ + + +Q +LY +NPLAGC P L IPV+ +Y+ +S Sbjct: 149 NPQPKIKAIQERYAGN-QERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNV 207 Query: 451 L-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGIW--------PIIMS 498 E + WI L + + P G +G + P+++ Sbjct: 208 ANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLI 267 Query: 499 LSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +S ++ M++ PP D Q +I ++P++ + S P+GL IYW +NV+S + Sbjct: 268 VSQYVSMEIMKPPQTNDPNQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAHK 327 Query: 554 AVIMKMHGAEIGLIDR 569 + K+ GA+ + + Sbjct: 328 VWLRKLGGAKPAVNEN 343 >gi|163119737|ref|YP_081441.2| OxaA-like protein [Bacillus licheniformis ATCC 14580] gi|145903248|gb|AAU25803.2| SpoIIIJ protein involved in stage III sporulation [Bacillus licheniformis ATCC 14580] Length = 266 Score = 178 bits (451), Expect = 3e-42, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 112/227 (49%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L++Y NL NFG+AI++ T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 38 WNTYIVYPLSQLITYVANLTNENFGLAIIIVTILIRLLILPLMIKQTKSSKAMQALQPEM 97 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ + L + H +NPLAGC+PIL+Q+P+ Y I + E+ Sbjct: 98 QKLREKYSSKDQKTQQKLQQETMALMQKHGVNPLAGCFPILIQMPILIGFYHAIMRTREI 157 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 F + DL DP I PI+ + FIQ K+ Sbjct: 158 AEHSFLWF--DLGERDPYFIL-------------------PILAGVFTFIQQKLMMAGTA 196 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ V SFPA L +YW N+ I Q I Sbjct: 197 QQNPQMAMMLWLMPIMIVVFAISFPAALSLYWVVGNLFMIAQTFFIK 243 >gi|317123172|ref|YP_004103175.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter marianensis DSM 12885] gi|315593152|gb|ADU52448.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter marianensis DSM 12885] Length = 224 Score = 178 bits (451), Expect = 3e-42, Method: Composition-based stats. Identities = 67/224 (29%), Positives = 118/224 (52%), Gaps = 27/224 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W WF + + + + G+ G++I+L TV V+L+ PL Q S M+ +QP+ Sbjct: 5 WQWF---VGAIETGLEWSRAVTGSAGLSIILFTVLVRLVLLPLTISQMRSMQRMQALQPE 61 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 ++ +++K++ +P Q +A+++L++ +N+NP +GC P+L+Q P+ +A++ + Sbjct: 62 VERIQKKYRDNP-QKANEAIMKLWRENNVNPASGCLPLLVQFPILYALFLALRTF----S 116 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + + WI DL A DP +I P++ ++ + QMK S Sbjct: 117 SGAFLWIPDLRARDPLSIL-------------------PVLAGVTTYFQMKTSMTTVQPQ 157 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q +L MP + F SFPAGL +YW SN+ SIVQQ V+ + Sbjct: 158 QRTMLVLMPAMLTFFAWSFPAGLALYWVTSNLFSIVQQVVLNRQ 201 >gi|259047909|ref|ZP_05738310.1| stage III sporulation protein J [Granulicatella adiacens ATCC 49175] gi|259035443|gb|EEW36698.1| stage III sporulation protein J [Granulicatella adiacens ATCC 49175] Length = 270 Score = 178 bits (451), Expect = 3e-42, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 27/247 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + + + + +L G ++G+ I+ T+ +L+ PL QY ST +QP+I Sbjct: 34 WDRIVLYNLSQFIIWLSDLFGGSYGLGIIFFTIITRLIMVPLMHFQYQSTRKQAILQPEI 93 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 LREK+ ++ ++LQ M LY+ IN AGC P+L+Q+PV A+Y+ IS + + Sbjct: 94 KALREKYSARDRATQEMLQAEMNALYEREGINQYAGCLPLLIQLPVMMALYQAISRTEVL 153 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F + L DP I P++ +++ FI +S D Sbjct: 154 KTGHFLWF--QLDQPDPYFIL-------------------PVLAAVTTFITTWLSMKMQD 192 Query: 514 KGQ--AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 G ++ +MPV+ +F + L +YW NV + Q ++ + + Sbjct: 193 TGGAGKAMMYFMPVMILFMSLGLASALSLYWVVGNVFMVGQTLLLNNPFKFQEEQKAIIA 252 Query: 572 STFSKNY 578 + Sbjct: 253 EKKRRQK 259 >gi|296330034|ref|ZP_06872518.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676758|ref|YP_003868430.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. spizizenii str. W23] gi|296153073|gb|EFG93938.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305415002|gb|ADM40121.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. spizizenii str. W23] Length = 259 Score = 178 bits (451), Expect = 3e-42, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ L++Y L G N+G++I+L T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 36 WDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLILPLMIKQLRSSKAMQALQPEM 95 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q LQ+ + L++ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 96 QKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 F + DL DP I PI+ ++ F+Q K+ Sbjct: 156 SEHSFLWF--DLGEKDPYYIL-------------------PIVAGVATFVQQKLMMAGNA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 QQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMIAQTFLIK 241 >gi|262038129|ref|ZP_06011530.1| stage III sporulation protein J [Leptotrichia goodfellowii F0264] gi|261747853|gb|EEY35291.1| stage III sporulation protein J [Leptotrichia goodfellowii F0264] Length = 224 Score = 178 bits (451), Expect = 3e-42, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 117/215 (54%), Gaps = 19/215 (8%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ +VGN+GIAI++ T+ V++L FPL KQ S M+ +QP++D+L+EK+K Sbjct: 21 ILKAINGIVGNYGIAIIIVTIIVRILIFPLTLKQEKSMKRMRELQPQLDKLKEKYKDD-Q 79 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q+LQ+ +++YK +N+NPL GC PIL+Q+P+F A++ S A F Sbjct: 80 QMLQQKTMEIYKENNVNPLGGCLPILIQMPIFIALFYAFSGDAIPNDATFLW-------- 131 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-----DKGQAMILNWM 523 F L + G V + PI+ ++ F Q KM P+ + ++ M Sbjct: 132 -----FHLKHPDNLFKIGTFAVNLLPILNTVVTFFQQKMMSGPSKEQGVNSQMQSMMYTM 186 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P++ + + P+G+ +Y+ S V+S+ QQ +IMK Sbjct: 187 PILMLVLFYNMPSGVTLYYLVSGVLSVAQQYIIMK 221 >gi|89101258|ref|ZP_01174079.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911] gi|89084023|gb|EAR63203.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911] Length = 244 Score = 178 bits (451), Expect = 3e-42, Method: Composition-based stats. Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ M + L G++G+AI++ T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 22 WNEYIVYPLSMFIVKVAETLGGSYGLAIIVVTLIIRLLILPLMIKQTKSSKAMQALQPEM 81 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ + L++ H +NPLAGC+P+++Q+P+ Y IS + E+ Sbjct: 82 QKLREKYSSKDQKTQQKLQQETMALFQQHGVNPLAGCFPLIVQMPILIGFYHAISRTREI 141 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 A DL + DP + P+I + FIQ K+ Sbjct: 142 --ANHDFLWFDLGSPDPIYLL-------------------PLIAGATTFIQQKIMMAGTA 180 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MPV+ + +FPA L +YW N+ IVQ I Sbjct: 181 NQNPQMAMMLWIMPVMIIVFAINFPAALSLYWVVGNIFMIVQTYFIK 227 >gi|52788049|ref|YP_093878.1| OxaA-like protein precursor [Bacillus licheniformis ATCC 14580] gi|319648516|ref|ZP_08002732.1| SpoIIIJ protein [Bacillus sp. BT1B_CT2] gi|52350551|gb|AAU43185.1| SpoIIIJ [Bacillus licheniformis ATCC 14580] gi|317389595|gb|EFV70406.1| SpoIIIJ protein [Bacillus sp. BT1B_CT2] Length = 265 Score = 178 bits (451), Expect = 3e-42, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 112/227 (49%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L++Y NL NFG+AI++ T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 37 WNTYIVYPLSQLITYVANLTNENFGLAIIIVTILIRLLILPLMIKQTKSSKAMQALQPEM 96 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ + L + H +NPLAGC+PIL+Q+P+ Y I + E+ Sbjct: 97 QKLREKYSSKDQKTQQKLQQETMALMQKHGVNPLAGCFPILIQMPILIGFYHAIMRTREI 156 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 F + DL DP I PI+ + FIQ K+ Sbjct: 157 AEHSFLWF--DLGERDPYFIL-------------------PILAGVFTFIQQKLMMAGTA 195 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ V SFPA L +YW N+ I Q I Sbjct: 196 QQNPQMAMMLWLMPIMIVVFAISFPAALSLYWVVGNLFMIAQTFFIK 242 >gi|104774817|ref|YP_619797.1| hypothetical protein Ldb2216 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514946|ref|YP_813852.1| preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423898|emb|CAI98940.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116094261|gb|ABJ59414.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 289 Score = 178 bits (451), Expect = 3e-42, Method: Composition-based stats. Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 20/224 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + + + G ++G AI++ TV ++++ PL Q ST M+ IQP++ Sbjct: 49 WDAWVVYYLSQFVLWIAKVCGGSYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEIQPEL 108 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ L + +LYK +NP AGC P+++Q+PV +A+Y+ I + EM Sbjct: 109 KALQEKYSSKDLETRNKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAIWRTPEM 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP I LP F + + +S+ Q M+ Sbjct: 169 QNGKFLWM--DLGKPDPYYI------LPILATVFTFLSSYIATLSVPKSSQTTMT----- 215 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M+ M ++ F + + +YW SN+ + Q V+ Sbjct: 216 ---KMMSYVMAIMVGIWAIVFQSAISLYWVISNLFQVGQTLVLQ 256 >gi|315644292|ref|ZP_07897462.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus vortex V453] gi|315280667|gb|EFU43956.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus vortex V453] Length = 296 Score = 178 bits (451), Expect = 3e-42, Method: Composition-based stats. Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 21/224 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 Y+ + ++F G +G+++++ + V+ L PL KQ S+ M+ IQP+I + Sbjct: 51 VYYFTLALDTFATWFN---GEYGLSVLVMVLIVRTLILPLTLKQVRSSKAMQAIQPEIQK 107 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+K P+ +Q ++L++ + +NP+AGC P+++Q+P+F A+Y I + +R F Sbjct: 108 IREKYK-DQPEKVQMETMKLFQENKVNPMAGCLPLIVQMPIFIALYHSIYYNNLLRDHEF 166 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 L D I + + Y L + MKM+P P Sbjct: 167 LWL--QLGQPDKLFILPVLAAITTY---------------LQTKMMMKMNPSPQMGMMQF 209 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +L P++ FP+ L +YW +SN+ +IVQ + + + Sbjct: 210 MLFVYPILIFVMSFQFPSALPLYWFYSNLYTIVQNYFLYRNNDK 253 >gi|300811989|ref|ZP_07092445.1| putative stage III sporulation protein J [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313124785|ref|YP_004035044.1| preprotein translocase subunit yidc [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300497015|gb|EFK32081.1| putative stage III sporulation protein J [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312281348|gb|ADQ62067.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 289 Score = 177 bits (450), Expect = 3e-42, Method: Composition-based stats. Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 20/224 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + + + G ++G AI++ TV ++++ PL Q ST M+ IQP++ Sbjct: 49 WDAWVVYYLSQFVLWIAKVCGGSYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEIQPEL 108 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ L + +LYK +NP AGC P+++Q+PV +A+Y+ I + EM Sbjct: 109 KALQEKYSSKDLETRNKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAIWRTPEM 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP I LP F + + +S+ Q M+ Sbjct: 169 QNGKFLWM--DLGKPDPYYI------LPILATVFTFLSSYIATLSVPKSSQTTMT----- 215 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M+ M ++ F + + +YW SN+ + Q V+ Sbjct: 216 ---KMMSYVMAIMVGIWAIVFQSAISLYWVISNLFQVGQTLVLQ 256 >gi|261410107|ref|YP_003246348.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus sp. Y412MC10] gi|329925107|ref|ZP_08280051.1| putative stage III sporulation protein J [Paenibacillus sp. HGF5] gi|261286570|gb|ACX68541.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus sp. Y412MC10] gi|328940226|gb|EGG36558.1| putative stage III sporulation protein J [Paenibacillus sp. HGF5] Length = 296 Score = 177 bits (450), Expect = 4e-42, Method: Composition-based stats. Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 21/224 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 Y+ + ++F G +G+++++ + V+ L PL KQ S+ M+ IQP+I + Sbjct: 51 VYYFTWALDTFATWFN---GEYGLSVLVMVLIVRTLILPLTLKQVRSSKAMQAIQPEIQK 107 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+K P+ +Q ++L++ + +NP+AGC P+++Q+P+F A+Y I + +R F Sbjct: 108 IREKYK-DQPEKVQMETMKLFQENKVNPMAGCLPLIVQMPIFIALYHSIYYNNLLRDHEF 166 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 L D I + Y + MKM+P P Sbjct: 167 LWL--QLGQPDKLFILPVLAAATTY---------------FQTKMMMKMNPSPQMGMMQF 209 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +L P++ FP+ L +YW +SN+ +IVQ + + + Sbjct: 210 MLFVYPILIFVMSFQFPSALPLYWFYSNLYTIVQNYFLYRNNDK 253 >gi|308801639|ref|XP_003078133.1| putative PPF-1 protein (ISS) [Ostreococcus tauri] gi|116056584|emb|CAL52873.1| putative PPF-1 protein (ISS) [Ostreococcus tauri] Length = 455 Score = 177 bits (449), Expect = 4e-42, Method: Composition-based stats. Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 24/249 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 GW I + + ++ ++G +I+L TV VKL FPL+K+Q S+ M+ Sbjct: 107 GWLGPITDALEGALRGIDGVLDGKVPYSYGYSILLLTVLVKLATFPLSKQQVESSIQMQA 166 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP+I EL+ + P + LQ +LY+ NPLAGC P+ +PVF +Y+ +S + Sbjct: 167 MQPRIKELQAMYANDP-ERLQLEQARLYREAGFNPLAGCLPLFATLPVFIGLYRALSNAA 225 Query: 452 -EMRHAPFWGWIKDLAAADPT---NIFTLFGILPFYLPGFMHVGIW--------PIIMSL 499 E + WI L N F L ++ G +G + P+++ + Sbjct: 226 AEHLLDDGFYWIPSLGGPTSIAARNDGNGFAWLWPFVDGHPPLGWYETGCYLVLPVLLVV 285 Query: 500 SMFIQMKM------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 S F+ + + PA + IL ++P + F + PAGL +YW ++N+I+ Q Sbjct: 286 SQFVSQTIISPQPKTDDPAQQQSQAILKFLPFMIGFFSLNVPAGLTLYWFFNNIITTAQT 345 Query: 554 AVIMKMHGA 562 V+ K+ Sbjct: 346 VVLRKITKP 354 >gi|238926593|ref|ZP_04658353.1| sporulation associated-membrane protein [Selenomonas flueggei ATCC 43531] gi|238885539|gb|EEQ49177.1| sporulation associated-membrane protein [Selenomonas flueggei ATCC 43531] Length = 224 Score = 177 bits (449), Expect = 4e-42, Method: Composition-based stats. Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 26/230 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F I + +++ FY++ ++G I+L T+ +KL+ +PL KQ S M+ IQ Sbjct: 9 FAPIIHILQVILGAFYSVTSAAGLESYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQ 68 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS-LE 452 PK+ +++EK+K P Q+LQ+ +L++ +NPLAGC P+L+Q+P+ +Y + Sbjct: 69 PKMKKIQEKYKSDP-QMLQQKTGELFREAGVNPLAGCLPLLVQMPILMGMYYALFNFTFP 127 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 A + W+ ++ DP I P++ + + F+Q KM+ Sbjct: 128 SAEAAAFFWLPSMSEPDPYYIL-------------------PVLSAATTFLQQKMTSSEM 168 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +++ MP+ + +FP+GL++YW NV+ I+QQ + + G Sbjct: 169 TGQMKIMMTVMPLFIGWISLTFPSGLVLYWVTMNVVQIIQQWWMYRSEGP 218 >gi|16081156|ref|NP_391984.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. 168] gi|7676172|sp|Q01625|OXAA1_BACSU RecName: Full=Membrane protein oxaA 1; AltName: Full=Stage III sporulation protein J; Flags: Precursor gi|40023|emb|CAA44401.1| unnamed protein product [Bacillus subtilis] gi|467388|dbj|BAA05234.1| stage III sporulation [Bacillus subtilis] gi|2636651|emb|CAB16141.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. subtilis str. 168] Length = 261 Score = 177 bits (449), Expect = 4e-42, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ L++Y L G N+G++I+L T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 38 WDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLILPLMIKQLRSSKAMQALQPEM 97 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q LQ+ + L++ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 98 QKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 157 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 F + DL DP I PI+ ++ F+Q K+ Sbjct: 158 SEHSFLWF--DLGEKDPYYIL-------------------PIVAGVATFVQQKLMMAGNA 196 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 197 QQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMIAQTFLIK 243 >gi|256833763|ref|YP_003162490.1| 60 kDa inner membrane insertion protein [Jonesia denitrificans DSM 20603] gi|256687294|gb|ACV10187.1| 60 kDa inner membrane insertion protein [Jonesia denitrificans DSM 20603] Length = 315 Score = 177 bits (449), Expect = 4e-42, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 115/267 (43%), Gaps = 23/267 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++ F+ + + +A++ T+ +++L PL KQ ++ M+ IQP++ Sbjct: 16 WIMYLCHTFFVFLGLPDGSGVAWILAVVGLTIVIRVLIIPLFFKQIKASRAMQMIQPELQ 75 Query: 398 ELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +++K+K + + + + + LY H NPLA C PILLQ P+FF +++V++ E+ Sbjct: 76 AIQKKYKNKTDPASREAMGRETMALYSKHGTNPLASCMPILLQTPIFFGLFRVLNGLDEI 135 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGIL--------PFYLPGFMHVGIWPIIMSLSMFIQM 505 + A LFG P + + ++M +++I Sbjct: 136 AAGGSAIGPINTEVATQIENSQLFGASLSSTFLHEPTDPNTKIVSAVLIVLMCATLYITQ 195 Query: 506 KM----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + P + Q ++L +P + + +FP G++IYW SN+ S QQ Sbjct: 196 RQLTMKNMPASAMQGPMAQTQKIMLYLIPGMMAVSGVNFPIGVLIYWVVSNLWSTGQQFY 255 Query: 556 -IMKMHGAEIGLIDRLRSTFSKNYNSQ 581 I +M R+ ++ + Sbjct: 256 TINRMPTPGSEAEKRMNERKARKAAKK 282 >gi|325685110|gb|EGD27241.1| ParB/SpoJ family partitioning protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 289 Score = 177 bits (449), Expect = 4e-42, Method: Composition-based stats. Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 20/224 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + + + G ++G AI++ TV ++++ PL Q ST M+ IQP++ Sbjct: 49 WDAWVVYYLSQFVLWIAKVCGGSYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEIQPEL 108 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ L + +LYK +NP AGC P+++Q+PV +A+Y+ I + EM Sbjct: 109 KALQEKYSSKDLETRNKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAIWRTPEM 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP I LP F + + +S+ Q M+ Sbjct: 169 QNGKFLWM--DLGKPDPYYI------LPILATVFTFLSSYIATLSVPKSSQTTMT----- 215 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M+ M ++ F + + +YW SN+ + Q V+ Sbjct: 216 ---KMMSYVMAIMVGIWAIVFQSAISLYWVISNLFQVGQTLVLQ 256 >gi|291486743|dbj|BAI87818.1| OxaA-like protein precursor [Bacillus subtilis subsp. natto BEST195] Length = 260 Score = 177 bits (449), Expect = 4e-42, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ L++Y L G N+G++I+L T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 37 WDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLILPLMIKQLRSSKAMQALQPEM 96 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q LQ+ + L++ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 97 QKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 156 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 F + DL DP I PI+ ++ F+Q K+ Sbjct: 157 SEHSFLWF--DLGEKDPYYIL-------------------PIVAGVATFVQQKLMMAGNA 195 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 196 QQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMIAQTFLIK 242 >gi|295101866|emb|CBK99411.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Faecalibacterium prausnitzii L2-6] Length = 361 Score = 177 bits (449), Expect = 4e-42, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 124/298 (41%), Gaps = 53/298 (17%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D Y + P+ +M + YNL+ N+G I++ T+ ++LL PL Q S A M QP Sbjct: 4 DMNILYILGVPLGYVMEWIYNLIPNYGWDIIIFTIVIRLLSIPLQLNQQKSMAKMSAFQP 63 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-- 452 I ++++K+K P+ Q+ +++L + P AGC P+L+ V F + +V+ L+ Sbjct: 64 MIADIQKKYK-DKPEKQQEELMKLQQEFGYKPTAGCMPMLVNFLVMFGVIEVVYRPLQRI 122 Query: 453 -------MRHAPFWGWIKDLA-------------------------AADPTNIFTLFG-I 479 + A ++ D N T FG Sbjct: 123 FHIGAEAITAAGDAMTALGISFTQVTRDTNIIAQVLAGESTVTSVFTPDQLNTITEFGQH 182 Query: 480 LPFYLPGFMHVGIW------------PIIMSLSMF----IQMKMSPPPADKGQAMILNWM 523 + F+ V + PI+ ++MF I MK S + + M Sbjct: 183 MDFFGIDLTRVPQYSLAADNLPLLIFPILAVVTMFISTHISMKASGQEMQGSMKLTMYMM 242 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 P+++VF + P +Y+ SN++ VQ V+ K++ E + +++++ + + Sbjct: 243 PLMYVFFCFTVPCAFSLYYVISNIVMTVQTQVMRKIYDPE-KMKEQVKAEIASRRKEE 299 >gi|260904985|ref|ZP_05913307.1| 60 kDa inner membrane insertion protein [Brevibacterium linens BL2] Length = 319 Score = 177 bits (449), Expect = 4e-42, Method: Composition-based stats. Identities = 63/272 (23%), Positives = 125/272 (45%), Gaps = 40/272 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--------------NFGIAIMLTTVFVKLLFFPLAKKQY 383 W + P+ ++++ + + ++I T+ ++ + PL Q Sbjct: 3 WMDKLLYPLQWVVAWILAIFHEIFTAIGLPAANGWTWVLSIAGLTLVIRAVLIPLFVYQI 62 Query: 384 VSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 S M+ +QP+I L+ K+K Q + + + L++ + +P A C P+L+Q+P+ Sbjct: 63 KSQRKMQLLQPEIQRLQAKYKGKKDQYSRQAMAEEQMNLFRDNKTSPWASCLPLLVQMPI 122 Query: 440 FFAIYKVISISLEMRHAP---FWGWIKDLA-AADPTNIFTLFGILPFYLPGF---MHVGI 492 FF++++VI ++ G+ ++LA A+ +++F + F G + G+ Sbjct: 123 FFSLFRVIHNMPDVASGSVGAIGGFTQELAIQAEQSSVFGISLSATFMSDGIGVKLLTGV 182 Query: 493 WPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 +IM+ +MFI K P + Q M+L MP+VF FP G++ YW Sbjct: 183 LIVIMASTMFITQKQMMAKNMSESAMANPMMQSQKMLLYVMPLVFGIGGIYFPLGVLFYW 242 Query: 543 SWSNVISIVQQAVIMKMH-----GAEIGLIDR 569 SN ++ QQ V+++ AE +++R Sbjct: 243 LVSNTWTMCQQHVVIRNMPAPGSKAEKEMLER 274 >gi|325126646|gb|ADY85976.1| Stage III sporulation protein J [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 289 Score = 177 bits (449), Expect = 5e-42, Method: Composition-based stats. Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 20/224 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + + + G ++G AI++ TV ++++ PL Q ST M+ IQP++ Sbjct: 49 WDAWVVYYLSQFVLWIAKVCGGSYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEIQPEL 108 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ L + +LYK +NP AGC P+++Q+PV +A+Y+ I + EM Sbjct: 109 KALQEKYSSKDLETRNKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAIWRTPEM 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP I LP F + + +S+ Q M+ Sbjct: 169 QNGKFLWM--DLGKPDPYYI------LPILATVFTFLSSYIATLSVPKSSQTTMT----- 215 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M+ M ++ F + + +YW SN+ + Q V+ Sbjct: 216 ---KMMSYVMAIMVGIWAIVFQSAIPLYWVISNLFQVGQTLVLQ 256 >gi|221312087|ref|ZP_03593934.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. 168] gi|221316412|ref|ZP_03598217.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221325608|ref|ZP_03606902.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. SMY] gi|321313665|ref|YP_004205952.1| OxaA-like protein [Bacillus subtilis BSn5] gi|580918|emb|CAA78595.1| SpoIIIJ [Bacillus subtilis subsp. subtilis str. 168] gi|320019939|gb|ADV94925.1| OxaA-like protein precursor [Bacillus subtilis BSn5] Length = 259 Score = 177 bits (449), Expect = 5e-42, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ L++Y L G N+G++I+L T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 36 WDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLILPLMIKQLRSSKAMQALQPEM 95 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q LQ+ + L++ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 96 QKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 F + DL DP I PI+ ++ F+Q K+ Sbjct: 156 SEHSFLWF--DLGEKDPYYIL-------------------PIVAGVATFVQQKLMMAGNA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 QQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMIAQTFLIK 241 >gi|183602664|ref|ZP_02964028.1| conserved hypothetical transmembrane protein in the 60 kDa inner membrane protein family [Bifidobacterium animalis subsp. lactis HN019] gi|219684025|ref|YP_002470408.1| hypothetical protein BLA_1550 [Bifidobacterium animalis subsp. lactis AD011] gi|241191630|ref|YP_002969024.1| Preprotein translocase subunit [Bifidobacterium animalis subsp. lactis Bl-04] gi|241197035|ref|YP_002970590.1| Preprotein translocase subunit [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218082|gb|EDT88729.1| conserved hypothetical transmembrane protein in the 60 kDa inner membrane protein family [Bifidobacterium animalis subsp. lactis HN019] gi|219621675|gb|ACL29832.1| membrane protein oxaA [Bifidobacterium animalis subsp. lactis AD011] gi|240250022|gb|ACS46962.1| Preprotein translocase subunit [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251589|gb|ACS48528.1| Preprotein translocase subunit [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177766|gb|ADC85012.1| Inner membrane protein [Bifidobacterium animalis subsp. lactis BB-12] gi|295794622|gb|ADG34157.1| Preprotein translocase subunit [Bifidobacterium animalis subsp. lactis V9] Length = 336 Score = 177 bits (449), Expect = 5e-42, Method: Composition-based stats. Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 34/254 (13%) Query: 336 WGWFYFIAKPMFMLMSY----FYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WG+ Y I P+ LM++ F+ L ++ +AI+ + V+ FPL K Sbjct: 13 WGFVYKILTPIEWLMTWVMWVFHKLFTFIGMPEHGISWALAIIFLVIVVQACVFPLYYKS 72 Query: 383 YVSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 M+ +QPK+ +++ K+K + + +Q+ M++LYK +N NP C P+LLQ P Sbjct: 73 MKGMRAMQAMQPKMMKIQNKYKGKNDPASKEAMQREMMKLYKDNNANPAGSCLPMLLQGP 132 Query: 439 VFFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGI------LPFYLPGFMHVG 491 VF ++ V+S + R D+A A+ + T FG+ G + +G Sbjct: 133 VFMCMFYVLSAIPYIARGKRSPLGAFDVATAESFSQSTYFGVKITDSFTTATTTGKVVIG 192 Query: 492 IWPIIMSLS----MFIQMKMSPPPA------DKGQAMILNWMPVVFVFALSSFPAGLIIY 541 I+ +M F M+ + PA Q +L P++++F+ + P ++IY Sbjct: 193 IFVALMCACLWYMQFYSMRRNTAPASVNRQSQMMQKAMLWVFPIMYIFSGVAMPFAVLIY 252 Query: 542 WSWSNVISIVQQAV 555 W +N+ ++++ Sbjct: 253 WLANNICNLLRTMW 266 >gi|308175811|ref|YP_003922516.1| Inner membrane protein oxaA [Bacillus amyloliquefaciens DSM 7] gi|307608675|emb|CBI45046.1| Inner membrane protein oxaA [Bacillus amyloliquefaciens DSM 7] Length = 259 Score = 177 bits (448), Expect = 6e-42, Method: Composition-based stats. Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ +++Y L G N+G++I++ T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 36 WDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTILIRLLILPLMIKQLRSSKAMQALQPEM 95 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ + L+ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 96 QKLREKYSSKDQKTQQKLQQETMALFSKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL DP I PI+ ++ F+Q K+ P Sbjct: 156 SQHSFLWF--DLGEKDPYYIL-------------------PIVAGVATFVQQKLMMAGNP 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FP+ L +YW N+ I Q +I Sbjct: 195 SQNPQMAMMVWIMPIMIIVFAINFPSALSLYWVVGNLFMIAQTFLIK 241 >gi|124010502|ref|ZP_01695137.1| inner membrane protein OxaA [Microscilla marina ATCC 23134] gi|123982339|gb|EAY23887.1| inner membrane protein OxaA [Microscilla marina ATCC 23134] Length = 548 Score = 177 bits (448), Expect = 6e-42, Method: Composition-based stats. Identities = 91/382 (23%), Positives = 171/382 (44%), Gaps = 48/382 (12%) Query: 229 LVEQKYSDI----EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 L + + ++ + E+ W + K++ + I +K +F++ + Sbjct: 132 LSKGDFEELSGLTAEYQQKRIKETLHWATFNQKFFTTGLI-AKNKNFNAAVFATEVKDPK 190 Query: 285 YQAKFSANEITILPGK----SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG--- 337 + EI +L G + + G ++ + K + F + G Sbjct: 191 SKTVEKHGEIDLLVGSNDIIAGKGQFSFYFGPNQYYIL----KKVEAESFSDNVYLGYPV 246 Query: 338 --WFY-FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN--- 391 WF ++ P+F + F V N+G+ I+L ++ +K + FPL + Y S A MK Sbjct: 247 VNWFAKYLVVPLFAFLEGF---VSNYGVIIILLSLIIKSMLFPLTYRSYKSMAKMKVINK 303 Query: 392 -IQPKIDELREKF------KQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFF 441 +QP++D +EK K+ Q +LYK +P A GC P+LLQ+P+ F Sbjct: 304 YLQPRMDAFKEKHRKENGGKEPDMQTTSMHQQELYKKIGQSPFAAVQGCLPMLLQMPILF 363 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A++ ++E+R P + W DL+ D ++ T LPF H+ I+ ++MS+S Sbjct: 364 AMFMFFPSAIELRQQP-FLWASDLSVYD--HVITFSFNLPFLG---NHISIFTLLMSISS 417 Query: 502 F-IQMKMSPPPADKG------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 I M + A G +++ MP++F F L+S+P+GL Y+ N+I++ QQ Sbjct: 418 IGITMTSNQNTATAGGPNAGMMKVMMYMMPIIFFFVLNSYPSGLSFYYLIQNLITLGQQH 477 Query: 555 VIMKMHGAEIGLIDRLRSTFSK 576 +I + E + ++ ++ Sbjct: 478 LIKRYFVDEEKIEAKISKFEAE 499 >gi|87311362|ref|ZP_01093483.1| 60 kDa inner-membrane protein-like [Blastopirellula marina DSM 3645] gi|87285942|gb|EAQ77855.1| 60 kDa inner-membrane protein-like [Blastopirellula marina DSM 3645] Length = 788 Score = 177 bits (448), Expect = 6e-42, Method: Composition-based stats. Identities = 119/651 (18%), Positives = 234/651 (35%), Gaps = 117/651 (17%) Query: 18 VYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN-- 75 W Y E+ Q S + + D ++L+ V++++ Sbjct: 129 YLGWLMPYDAVAGCEIRIVGPGTPAALATPQDAKSGVGLQVGDIIKSLAGEEVVDVQSYV 188 Query: 76 ---------PSLIGSINLKGAQFDDLNLRGYHLDVSSN-----SPIVTLLSPSNT----- 116 ++ + KGA L Y ++ P V+ + T Sbjct: 189 DALKLTKPEDAIELVVERKGADAVQ--LLTYTATLTDLPLEVIKPEVSEVVDKVTGMPRT 246 Query: 117 ---KNAYFAEL----DYVSTANNI---ELPNSNTVWNLISGKILTPTTPIKLVF--KNAN 164 +AY L + A +LP W L+ + T LV Sbjct: 247 VEHPSAYLTSLARINGSMIPAEGKMINDLPLITKNWRLVENEDPTIVQFETLVTPEDLPQ 306 Query: 165 NILF-----ERTISLDEH------------YLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 + F +T L + Y K V N+ + + + R + Sbjct: 307 GVRFAKLRLVKTFQLPKKPTEANAESNYQPYGLKYSLQVFNDGTEPVDAAFR-QFGATGL 365 Query: 208 QTATNTFG--VQEGFIAVLGDKSLVEQKYSD---------IEKSSISNFHESNSWLGISD 256 T + + G+ + E D I K+ S + D Sbjct: 366 PTEGWWYSNKIARGWGGAGLRDVVWESSKGDYDMFTVAKIIAKAQDLESDRQISMFKVDD 425 Query: 257 K-----------YWASVFIPSKETS----------FHSQFKYLSDGHARYQAKFSANEIT 295 + Y++S + ++ + + T Sbjct: 426 QIKPKFAGVDAVYFSSAMVFNESDKGPALSRGAAIVAAVVDEEQKQRTDCTYRLDGATET 485 Query: 296 ILPGKS-ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I PG + +F+G K+ + HY + L +GWF++++ + ++ + + Sbjct: 486 IEPGDKPFELSCTIFSGPKKEELLAHY-------GLQNLEYYGWFHYVSTALLFVLHFMH 538 Query: 355 NLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + + +G+ I+ T+ V+ FPL++KQ + + + P++ ++ E +K+ P + Q Sbjct: 539 DYLYIPYGLGIIFLTLMVRGCLFPLSRKQARNMLIQQQLAPEMKKISEMYKEDPIKQRQ- 597 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI---KDLAAADP 470 A +L+ +N NPL GC + LQ+P+F +Y+ +++ +++R APF I +L+A D Sbjct: 598 AQQELFTKYNFNPLGGCGVMFLQLPIFLGLYRALAVDIQLRQAPFIPGIEWCSNLSAPDQ 657 Query: 471 TNIFTLFGILPFYLPGF-------------MHVGIWPIIMSLSMFIQMKMSPPPA----D 513 + G+LP ++ ++ I P+ +Q KM PPA Sbjct: 658 A--WYWVGVLPDFMTIHPSASFPASFLFLGPYLNILPLFTIALFLVQQKMFMPPAVDEQQ 715 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 K Q ++ +M V F P+GL IY+ +V I+++ +I K A++ Sbjct: 716 KMQQQMMTYMMVFIGFMFFRVPSGLCIYFITQSVWGILERKLIPKPQLADL 766 >gi|304405892|ref|ZP_07387550.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus curdlanolyticus YK9] gi|304345135|gb|EFM10971.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus curdlanolyticus YK9] Length = 258 Score = 177 bits (448), Expect = 6e-42, Method: Composition-based stats. Identities = 71/222 (31%), Positives = 119/222 (53%), Gaps = 28/222 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 Y+ A + +F G +G++I+L T+ V+ L PL KQY S+ M+ IQP++++ Sbjct: 49 VYWFALVLDTFAKWF---GGEYGLSILLLTIIVRTLILPLTLKQYRSSKAMQAIQPELEQ 105 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 LR+K K +P Q+LQ+ ++L++ +++NP+AGC P+++Q+PVF A+Y I ++ +R F Sbjct: 106 LRKKHKDNP-QLLQQETMKLFQQNSVNPMAGCLPMIVQMPVFIALYNAIYMNSAIREHQF 164 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKG 515 +L DP +I PII +++ F+Q KM G Sbjct: 165 LWL--ELGQKDPYHIL-------------------PIIAAITTFVQTKMMQSQQKTTMPG 203 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +L PV+ SFPA L +YW +SN+ +IVQ + Sbjct: 204 MQAMLLIFPVMIFVMALSFPAALPLYWIFSNLYTIVQNYFLY 245 >gi|319651097|ref|ZP_08005231.1| OxaA-like protein [Bacillus sp. 2_A_57_CT2] gi|317397267|gb|EFV77971.1| OxaA-like protein [Bacillus sp. 2_A_57_CT2] Length = 250 Score = 177 bits (448), Expect = 6e-42, Method: Composition-based stats. Identities = 66/230 (28%), Positives = 114/230 (49%), Gaps = 31/230 (13%) Query: 338 WFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ + + G++G++I++ T+ ++L+ PL KQ S+ M+ IQP++ Sbjct: 25 WNEYIVYPLSLFIIKVAEFAGGSYGLSIIIVTIIIRLVILPLMIKQTRSSKAMQAIQPEM 84 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ + L++ H +NPLAGC+P+++Q+P+ Y I+ + E+ Sbjct: 85 QKLREKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPLVIQMPILIGFYHAITRTREI 144 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F + DL + DP + P+I ++ FIQ KM Sbjct: 145 ANHNFLWF--DLGSPDPIYLL-------------------PLIAGVTTFIQQKMMMAGTQ 183 Query: 514 K------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + M+L MP++ V +FPA L +YW N+ IVQ I Sbjct: 184 QTGQMAAQMKMMLYLMPIMIVIFAINFPAALSLYWVVGNIFMIVQTYFIK 233 >gi|154688209|ref|YP_001423370.1| OxaA-like protein precursor [Bacillus amyloliquefaciens FZB42] gi|154354060|gb|ABS76139.1| SpoIIIJ [Bacillus amyloliquefaciens FZB42] Length = 259 Score = 177 bits (448), Expect = 6e-42, Method: Composition-based stats. Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ +++Y L G N+G++I++ T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 36 WDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTILIRLLILPLMIKQLRSSKAMQALQPEM 95 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ + L+ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 96 QKLREKYSSKDQKTQQKLQQETMALFSKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL DP I PI+ ++ F+Q K+ P Sbjct: 156 SQHSFLWF--DLGEKDPYYIL-------------------PIVAGVATFVQQKLMMAGNP 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FP+ L +YW N+ I Q +I Sbjct: 195 TQNPQMAMMVWIMPIMIIVFAINFPSALSLYWVVGNLFMIAQTFLIK 241 >gi|84497198|ref|ZP_00996020.1| putative inner membrane protein translocase component YidC [Janibacter sp. HTCC2649] gi|84382086|gb|EAP97968.1| putative inner membrane protein translocase component YidC [Janibacter sp. HTCC2649] Length = 335 Score = 177 bits (448), Expect = 7e-42, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 114/274 (41%), Gaps = 33/274 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGN----------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 Y I + +M F+ + ++I+ + ++ PL KQ ++ Sbjct: 9 LYPIELLVAWIMYGFHQAFTWIGLDPASGAAWALSIIGLVLVMRAAMIPLFVKQINASRK 68 Query: 389 MKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 M+ IQP++ ++++K+K Q + + + LYK+ NP + C PIL+Q P FF ++ Sbjct: 69 MQMIQPELQKIQKKYKGKSDPESRQAMTQETMALYKSEGTNPFSSCLPILVQSPFFFGLF 128 Query: 445 KVISISLEMRHAP--FWGWIKDLAAADPTNIFTLFGILPFYLPGF------MHVGIWPII 496 +V++ + G I A + L G + + ++ Sbjct: 129 RVLNGLKGISEGTKDPIGPITRTVAKQAESATLFGAQLSDKFIGAETTTTKVVTILLIVL 188 Query: 497 MSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 MS + F + P K Q +I+ MPVVF + +FP G+++YW +N Sbjct: 189 MSATTFTTQRQLMTKNMPASALDNPFAKQQKLIMYVMPVVFAVSGINFPIGVLLYWFTTN 248 Query: 547 VISIVQQAVIMKMHGAEIGLIDR-LRSTFSKNYN 579 V S+ QQ +++ A +R L +K Sbjct: 249 VWSMTQQFYVIRKMPAPGSAAERALHERLAKRGK 282 >gi|297572341|ref|YP_003698115.1| membrane protein insertase, YidC/Oxa1 family [Arcanobacterium haemolyticum DSM 20595] gi|296932688|gb|ADH93496.1| membrane protein insertase, YidC/Oxa1 family [Arcanobacterium haemolyticum DSM 20595] Length = 377 Score = 177 bits (448), Expect = 7e-42, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 115/258 (44%), Gaps = 38/258 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN----------FGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + I + +M ++++ + ++I+ T+ +++L PL KQ + Sbjct: 4 ILFPIKWVISWIMYGIHSVLTALGLSSGSGAAWVLSIVGLTIVIRILIIPLFNKQIRAMR 63 Query: 388 NMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + IQP++ +L++K+K Q Q+ ++ LY+ +P A C P+L+Q+P+FFA+ Sbjct: 64 MGQEIQPEVQKLQKKYKGRTDAVSKQRQQEELMALYRERGTSPFASCLPLLIQMPIFFAL 123 Query: 444 YKVISISLEMRHAPFWGW-IKDLAAADPTNIFTLFGI-----------LPFYLPGFMHVG 491 ++++ + D A TLFG P + Sbjct: 124 FRLLYAVDPISKGQMGTIGAVDKTVAHEIANSTLFGAPLSSSLGTAGTFPLPTNVRIVAI 183 Query: 492 IWPIIMSLSMFIQMKMSPP------------PADKGQAMILNWMPVVFVFALSSFPAGLI 539 I ++M ++F KM PA K Q M+L MP++++F +F G++ Sbjct: 184 ILIVLMMATLFFSQKMIMTKNMPESAQDPDNPAYKMQKMMLYGMPIIYIFTGFAFQVGVL 243 Query: 540 IYWSWSNVISIVQQAVIM 557 +YW SN+ +I QQ ++ Sbjct: 244 VYWLTSNLWNIGQQYWLI 261 >gi|154249719|ref|YP_001410544.1| 60 kDa inner membrane insertion protein [Fervidobacterium nodosum Rt17-B1] gi|154153655|gb|ABS60887.1| 60 kDa inner membrane insertion protein [Fervidobacterium nodosum Rt17-B1] Length = 448 Score = 176 bits (447), Expect = 7e-42, Method: Composition-based stats. Identities = 78/373 (20%), Positives = 149/373 (39%), Gaps = 60/373 (16%) Query: 201 RIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS-DIEKSSISNFHESNSWL------G 253 +I P T+ D L+ Y IE W Sbjct: 107 QITFDYPNRLKKTYIF---------DDKLITYSYKVKIESPDSVKIALPLIWSNDTVRSA 157 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 + ++ S F P K+ + +F DG + F++ G Sbjct: 158 M--NFFVS-FRPDKDYASIVKFSGKLDGTKVVG---------------NSLEFFVYMGPY 199 Query: 314 EFPTIHHYEKDLAIPRFEMLI---DWG-WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 + + H + + E++ G W+ FIA + ++ NFG+ I++ T+ Sbjct: 200 KKTVLKHVFGEDSGRLIELIKTIPGVGTWYSFIADGLTEFFNWINTFTRNFGLTIIVFTI 259 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 V+L+ +P Q M+ +QP ++ +++K+K PQ Q+ +++LYK + INP +G Sbjct: 260 IVRLILYPFYHAQTKQMIQMRKLQPAVEAIKKKYKD--PQKQQEELMKLYKENKINPSSG 317 Query: 430 CWPILLQIPVFFAIYKVISISLEMRH-APFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 C +L+Q+P+F +Y VI E+ + + KDL+A G+ Sbjct: 318 CLMLLIQLPIFMLLYGVIQSYQELFSVSGGFLIWKDLSAG-----------------GWG 360 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 ++ II L+ + ++ + I M +F F + P+G+ +YW+ +++I Sbjct: 361 ANWLFLIITILTSYYLALITSQDSRTAWQQI--IMGAIFPFFFINLPSGIFLYWTMNSII 418 Query: 549 SIVQQAVIMKMHG 561 +V I K + Sbjct: 419 QLVITFYIYKRYK 431 >gi|253573861|ref|ZP_04851203.1| inner membrane insertion protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251846338|gb|EES74344.1| inner membrane insertion protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 280 Score = 176 bits (447), Expect = 7e-42, Method: Composition-based stats. Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 21/224 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 Y+ + + +F G +GIAI++ + V+ L PL KQ S+ M+ IQP++ + Sbjct: 34 VYYFSLALDTFAEWFN---GAYGIAILIMVLIVRTLILPLTLKQVKSSKAMQAIQPQLQK 90 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +RE++K +P + Q+ ++L++ H +NP+AGC+P+L+Q+PVF A+Y I + +R F Sbjct: 91 IREQYKDNP-EKQQQETMKLFQEHKVNPMAGCFPLLIQMPVFIALYNSIYYNSAIREHSF 149 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 L D I + + + + M+P A Sbjct: 150 LWL--QLGEPDKLFILPAIAAITTF---------------IQTKMMSSMNPQGMQGPMAF 192 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ P++ +F A L +YW +SN+ +I Q I + Sbjct: 193 MMWVYPILIFVMAYNFAAALPLYWIFSNLYTIAQNYFIYRKKDP 236 >gi|304437936|ref|ZP_07397882.1| stage III sporulation protein J [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369076|gb|EFM22755.1| stage III sporulation protein J [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 224 Score = 176 bits (447), Expect = 8e-42, Method: Composition-based stats. Identities = 62/226 (27%), Positives = 116/226 (51%), Gaps = 26/226 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F I + +++ FY++ ++G I+L T+ +KL+ +PL KQ S M++IQ Sbjct: 9 FAPIIHILQVILGAFYSVTSAAGLESYGFPIILLTILIKLVTYPLTVKQVKSMKAMQDIQ 68 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS-LE 452 PK+ +++EK+K P Q+LQ+ +L++ +NPLAGC P+L+Q+P+ +Y + Sbjct: 69 PKMKKIQEKYKHDP-QMLQQKTGELFREAGVNPLAGCLPLLVQMPILMGMYYALFNFTFP 127 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 A + W+ ++ DP I P++ + + F+Q KM+ Sbjct: 128 SAEAAAFFWLPSMSEPDPYYIL-------------------PVLSAATTFLQQKMTSSEM 168 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +++ MP+ + +FP+GL++YW NV+ I QQ + + Sbjct: 169 TGQMKIMMTVMPLFIGWISLTFPSGLVLYWVTMNVVQIAQQWWMYR 214 >gi|328555787|gb|AEB26279.1| OxaA-like protein precursor [Bacillus amyloliquefaciens TA208] gi|328914176|gb|AEB65772.1| Inner membrane protein oxaA [Bacillus amyloliquefaciens LL3] Length = 249 Score = 176 bits (446), Expect = 9e-42, Method: Composition-based stats. Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ +++Y L G N+G++I++ T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 26 WDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTILIRLLILPLMIKQLRSSKAMQALQPEM 85 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ + L+ H +NPLAGC+PIL+Q+P+ Y I + + Sbjct: 86 QKLREKYSSKDQKTQQKLQQETMALFSKHGVNPLAGCFPILIQMPILIGFYHAIMRTQAI 145 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 F + DL DP I PI+ ++ F+Q K+ P Sbjct: 146 SQHSFLWF--DLGEKDPYYIL-------------------PIVAGVATFVQQKLMMAGNP 184 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM++ MP++ + +FP+ L +YW N+ I Q +I Sbjct: 185 SQNPQMAMMVWIMPIMIIVFAINFPSALSLYWVVGNLFMIAQTFLIK 231 >gi|291455688|ref|ZP_06595078.1| membrane protein OxaA [Bifidobacterium breve DSM 20213] gi|291382616|gb|EFE90134.1| membrane protein OxaA [Bifidobacterium breve DSM 20213] Length = 336 Score = 176 bits (446), Expect = 9e-42, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 116/255 (45%), Gaps = 35/255 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-------------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WG+ Y I P+ L ++ +V ++ +AI++ + V+ FPL KQ Sbjct: 14 WGFLYKILTPVEWLQTWIMKIVHDFFVMLGMSPVGVSWILAIIILVLVVQACIFPLFYKQ 73 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIP 438 S M+ + PK+ ++ K+K Q + + ++LY+ +N+NP C P+L+Q P Sbjct: 74 IKSMRKMQALAPKMQRIQNKYKGKTDQASKEAMSRETMKLYQDNNVNPAGSCLPMLIQGP 133 Query: 439 VFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFY-------LPGFMHV 490 VF +++ +S + + D+A A +FGI+ G + + Sbjct: 134 VFMSMFYTLSAIPYIANGKRDPLGAFDVATAKQFTQTDVFGIVSVTDNFTRAATAGKVVI 193 Query: 491 GIWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLII 540 G++ +M +++ ++ + Q +L PV+++F+ +SFP +++ Sbjct: 194 GVFVFLMCFCLWLMQYINMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGASFPFAVLV 253 Query: 541 YWSWSNVISIVQQAV 555 YW +NV ++ + Sbjct: 254 YWLTNNVCNLCRTLW 268 >gi|261338550|ref|ZP_05966434.1| membrane protein OxaA [Bifidobacterium gallicum DSM 20093] gi|270276572|gb|EFA22426.1| membrane protein OxaA [Bifidobacterium gallicum DSM 20093] Length = 337 Score = 176 bits (446), Expect = 9e-42, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 116/256 (45%), Gaps = 36/256 (14%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-------------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WGW Y + P+ LM++ NL ++ ++I+ + V+ FPL KQ Sbjct: 13 WGWLYKLLTPIEWLMTWIMNLFHEFLTFIGMPQVGASWVLSIIFLVLVVQACIFPLFYKQ 72 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIP 438 S +M+ IQPK+ +++ K+K Q +Q+ M++LY+ +++NP C P+L+Q P Sbjct: 73 MKSMRHMQAIQPKMMKIQNKYKGKTDQASKDAMQREMMKLYQDNHVNPAGSCLPMLIQGP 132 Query: 439 VFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGI--------LPFYLPGFMH 489 VF ++ V+S + D A A FGI + G + Sbjct: 133 VFMCMFYVLSAIPYIAIGKRDTLGAFDQATAKQFADTHFFGISLQTRFTDPSTMVGGKVV 192 Query: 490 VGIWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLI 539 +G++ M ++ + + + Q ++L P++++F+ + P ++ Sbjct: 193 IGLFVAAMCFCLWFMQRYTMKHNTAAASMNKQTETMQKVMLWGFPIMYIFSGIAMPFAVL 252 Query: 540 IYWSWSNVISIVQQAV 555 +YW +N+ ++++ Sbjct: 253 VYWLTNNICNLLRSVW 268 >gi|157363658|ref|YP_001470425.1| 60 kDa inner membrane insertion protein [Thermotoga lettingae TMO] gi|157314262|gb|ABV33361.1| 60 kDa inner membrane insertion protein [Thermotoga lettingae TMO] Length = 443 Score = 176 bits (446), Expect = 9e-42, Method: Composition-based stats. Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 22/227 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W+ + P+ + + + NFG AI++ TV V+ + +PL Q S M+ +QP+I+ Sbjct: 224 WYDPVFYPLVWFFWWLFEMTRNFGWAIIIFTVIVRFVLYPLYHAQTKSMIKMRKVQPRIE 283 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-EMRHA 456 +R+K+K P Q+ ++++Y+ INP GC +L+Q+PVFF +Y VI E Sbjct: 284 AIRKKYKD--PTKQQEELMKVYREEGINPAGGCLMLLIQLPVFFLLYAVIRYFQEEFAFG 341 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + DL+ + GF I+ I ++ + ++ + Sbjct: 342 SKFLLWNDLS-----------------VGGFGPNAIFIIATVVASYFNTLITSQDSRSAW 384 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 IL M ++F F S P+GL +Y++ + VI +V I K + + Sbjct: 385 QGIL--MSLIFPFLFVSLPSGLFLYYTVNTVIQLVITYYIYKRYKIK 429 >gi|257070288|ref|YP_003156543.1| preprotein translocase subunit YidC [Brachybacterium faecium DSM 4810] gi|256561106|gb|ACU86953.1| preprotein translocase subunit YidC [Brachybacterium faecium DSM 4810] Length = 366 Score = 176 bits (446), Expect = 9e-42, Method: Composition-based stats. Identities = 62/278 (22%), Positives = 117/278 (42%), Gaps = 38/278 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 Y I + LM F+ L+ + +I+ TV V+ L PL +Q ++ +M Sbjct: 4 LYPIEWAVAWLMVKFHALLSVFMEPDSGVTWVFSIVGLTVVVRTLIIPLFVRQIRASRSM 63 Query: 390 KNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + + P++ +++K+K Q + + + +YK +P + C P+LLQ+P+FF +++ Sbjct: 64 QMVSPELQAVQKKYKGKTDQESRQKMAEETMAIYKEAGASPFSSCLPVLLQMPIFFGLFR 123 Query: 446 VISISL-EMRHAPFWGWIK--------------DLAAADPTNIFTLFGILPFYLPGFMHV 490 V+ L E +G + D+ A+ G + L G + Sbjct: 124 VLFYKLPEAADGAPFGPLSTELARSARSSTILGDVTIANSFLKPGDGGTVTMVLAGIIIA 183 Query: 491 GIWPIIMSLSMFIQMKMSPP-----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + + + MK P P Q M+L +P ++V P G++IYW + Sbjct: 184 CMCAVTFFTQKSLTMKNMPKASLEGPMASTQKMMLYMLPFIYVITGPGMPIGVLIYWLTT 243 Query: 546 NVISIVQQAVIMKMH-----GAEIGLIDRLRSTFSKNY 578 NV + QQA++++ AE R+ + K Sbjct: 244 NVWTFGQQAIVIRATPTPGSDAEKERQARINAKREKKG 281 >gi|256827813|ref|YP_003151772.1| preprotein translocase subunit YidC [Cryptobacterium curtum DSM 15641] gi|256583956|gb|ACU95090.1| preprotein translocase subunit YidC [Cryptobacterium curtum DSM 15641] Length = 257 Score = 176 bits (446), Expect = 1e-41, Method: Composition-based stats. Identities = 56/221 (25%), Positives = 115/221 (52%), Gaps = 2/221 (0%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F +S+FY+ G++G+AI+ T+ +LL +PL +KQ S+ M+ +QP + E++ K+ Sbjct: 9 IFWCISFFYSFFGDWGMAIVTVTIIFRLLVYPLMQKQIKSSFQMQKVQPLLKEIQTKYAD 68 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q +Q+ M ++Y NP+AGC PI LQ+P+F A+++V+ + + + Sbjct: 69 D-QQRMQEEMQKIYAEAKFNPIAGCLPIFLQMPIFIALFQVLQEMTTRTQGSTYQFYHLV 127 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMP 524 + + ++P + + I+ M +Q + A K Q +++ +M Sbjct: 128 PDLTLSPSSAFGQGVLTFIPYIILLLIFAGATFAPMILQQRGQADSAQKRQTIMMSGFMS 187 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + +F + PAG++++W S++ + QQ + M++ E Sbjct: 188 LFMLFIGWTSPAGVLLFWGASSLFGVAQQQITMRVLKREDE 228 >gi|291165949|gb|EFE27996.1| stage III sporulation protein J [Filifactor alocis ATCC 35896] Length = 243 Score = 176 bits (446), Expect = 1e-41, Method: Composition-based stats. Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 22/245 (8%) Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ML+ Y + N+G+AI+ T+ VKL PL Q S M IQP I ++++K+ + Sbjct: 1 MLLKMIYTVTQNYGLAIIFFTIIVKLAMLPLTLSQNKSMMEMNKIQPLIQDIQKKYPKDK 60 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + QLYK H +NP+ GC P+L+Q+P+ FA+++ + +E + +A Sbjct: 61 -QKQAELTTQLYKEHGVNPMMGCLPLLVQMPILFALFRALRNPVEYVFGSETLF--QVAD 117 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP------------------ 509 + L + GF I+PI+ + + FI KM+ Sbjct: 118 TSFLWLKNLSSPDIITIGGFAFPFIFPIVAAAATFIDTKMTMLKNDKKKEKQKDGKQNQP 177 Query: 510 -PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P + Q +L MP++ + SFPAGL IYW+ S + SI Q+ ++ ++ ++ Sbjct: 178 ENPGESMQKTMLYMMPLMIFWWGRSFPAGLSIYWAVSTLFSIAQRKIVERISLSKEKGTQ 237 Query: 569 RLRST 573 + Sbjct: 238 AIERR 242 >gi|309789712|ref|ZP_07684292.1| hypothetical protein OSCT_0243 [Oscillochloris trichoides DG6] gi|308228198|gb|EFO81846.1| hypothetical protein OSCT_0243 [Oscillochloris trichoides DG6] Length = 348 Score = 176 bits (446), Expect = 1e-41, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 118/235 (50%), Gaps = 19/235 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W F+ + ++ +F G+ + I++ T+ +L+ PL S+ M+ IQP I Sbjct: 13 WGGFVGL-LEQILLWFSTTTGSVALGIVIFTICARLIILPLTLSSLRSSRQMQQIQPLIK 71 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRH 455 EL+ K+ + Q LQ+ ++LY+ + INP+ GC P+LLQ+P+FF +Y+ + +E R Sbjct: 72 ELQRKYGKD-QQKLQEETLKLYRDYKINPVGGCLPVLLQLPIFFGVYQAVYHLMVVEQRV 130 Query: 456 APFWGWIKDLAAADPTNIFT--LFGILPFYLPGFMHVGI---------WPIIMSLSMFIQ 504 G + D +F+ LFGI+ F G PI+ L +Q Sbjct: 131 NLSAGAKAAMENPDVVALFSEKLFGIIDLGRTAFGPHGSGFAEPIYFVLPILSILLQVLQ 190 Query: 505 MKM-SPPPADKGQAMI---LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 M +P D Q + + +MP+VF + +FP+G ++YW S+++ +VQQ Sbjct: 191 TVMATPRVQDPQQKAMTQAMMFMPLVFGYIAFTFPSGAVLYWVVSSLVGVVQQYF 245 >gi|296271541|ref|YP_003654173.1| 60 kDa inner membrane insertion protein [Thermobispora bispora DSM 43833] gi|296094328|gb|ADG90280.1| 60 kDa inner membrane insertion protein [Thermobispora bispora DSM 43833] Length = 318 Score = 175 bits (445), Expect = 1e-41, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 36/259 (13%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYV 384 +D + ++ + L++ ++ G N+ + I+ TV ++L +PL KQ Sbjct: 1 MDLPFLNWLYTAVAWLITQIHSGYGVVLPADSGLNWALTIITLTVLMRLAIYPLFVKQMR 60 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S+ ++ + PK+ LRE +K Q L + +++Y+ +NPL GC PIL Q P+F +I+ Sbjct: 61 SSRKLQELAPKLQRLRETYKHD-RQRLAEEQMRVYQEAGVNPLGGCLPILAQSPIFISIF 119 Query: 445 KVISISLEMRHAPFWGW--------IKDLAAADPTNIFTL------FGILPFYLPGFMHV 490 V+ E R + A P FT FG P + + + Sbjct: 120 TVLRAIAEDRAVYGMSQALVDSARAAHIIGAPLPATFFTSAADIQKFGADP--MTTKIVL 177 Query: 491 GIWPIIMSLSMFIQ---------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 + I + + F+ +M P + Q +++ P++ +F +FP GLI+Y Sbjct: 178 ACFVAISACTTFLTVRQSVRRSIQQMPDNPMVQQQKILMYVSPLLALF-SLNFPLGLILY 236 Query: 542 WSWSNVISIVQQAVIMKMH 560 W +N+ ++ QQ H Sbjct: 237 WVTTNLWTLGQQHWYYSRH 255 >gi|295106384|emb|CBL03927.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Gordonibacter pamelaeae 7-10-1-b] Length = 256 Score = 175 bits (445), Expect = 1e-41, Method: Composition-based stats. Identities = 69/227 (30%), Positives = 117/227 (51%), Gaps = 11/227 (4%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F ++ +FY+ G++G+AI++ TV ++L PL KQ S+ M+ +QP + E++ K+ Sbjct: 9 IFQIIQFFYDFCGDWGLAIIIVTVIFRVLISPLMHKQTKSSFQMQKVQPLMKEIQTKYAD 68 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS---LEMRHAPFWGWI 462 P Q Q+ M +LY NPLAGC P+LLQ+P+F A+++V+S E F+ + Sbjct: 69 DP-QRQQEEMQKLYAEVKFNPLAGCLPMLLQMPIFMALFQVLSEMGARTEGSTYEFYNLV 127 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN- 521 L FG YL + + M +Q + A + Q +I++ Sbjct: 128 PSLVERPSEAFAQGFGTFVPYLILMVVFAGATFL---PMVLQQMNNKDSAQRKQMVIMSA 184 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV---IMKMHGAEIG 565 M V ++ S PAG++++W S++I + QQ + IMK AE Sbjct: 185 VMSVFMLWISWSSPAGVLLFWGASSLIGLGQQQISMRIMKKRDAEAA 231 >gi|239918804|ref|YP_002958362.1| preprotein translocase subunit YidC [Micrococcus luteus NCTC 2665] gi|281414969|ref|ZP_06246711.1| preprotein translocase subunit YidC [Micrococcus luteus NCTC 2665] gi|239840011|gb|ACS31808.1| preprotein translocase subunit YidC [Micrococcus luteus NCTC 2665] Length = 332 Score = 175 bits (444), Expect = 2e-41, Method: Composition-based stats. Identities = 77/273 (28%), Positives = 129/273 (47%), Gaps = 45/273 (16%) Query: 339 FYFIAKPMFMLMSY----FYNLV----------GNFGIAIMLTTVFVKLLFFPLAKKQYV 384 F I P LMS+ F++++ + ++I+L V ++ L PL KQ Sbjct: 2 FEAILSPFRWLMSWLLGAFHSILEFAGLPADSGWTWALSILLLVVLIRTLLIPLFVKQIK 61 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGCWPILLQIPVF 440 + M+ IQP++ +L+ K+K Q+ ++AM L K H NP A C P+L+Q+P F Sbjct: 62 AQRAMQAIQPELQKLQAKYKGKKDQLSRQAMAMEQQALMKEHKANPFAACLPLLIQMPFF 121 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF---TLFGI-----------LPFYLPG 486 FA+Y+V+ + R A G D +AD F T+FG P P Sbjct: 122 FALYQVL---IGARGAAERGEAMDALSADQIRSFEGSTIFGARMSDTFMNSLGAPGSGPV 178 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPA 536 + + ++MS SMF KM P + Q ++L MP++F +FP Sbjct: 179 IVTAIVLILLMSGSMFFMQKMLMTKNMTQQALSGPMMQTQQIMLYAMPLIFGIGGINFPI 238 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 G+++YW++SN ++ QQ I++ + L ++ Sbjct: 239 GVLLYWTYSNFWAVGQQWWIIRNNPTPGSLAEK 271 >gi|213693342|ref|YP_002323928.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524803|gb|ACJ53550.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459524|dbj|BAJ70145.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 335 Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 112/255 (43%), Gaps = 35/255 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-------------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WG+ Y I P+ L ++ +V ++ +AI++ + V+ FPL KQ Sbjct: 13 WGFLYKILTPVEWLQTWIMKIVHDFFVMLGMSPIGVSWVLAIIILVLVVQACIFPLFCKQ 72 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIP 438 S M+ + PK+ ++ K+K Q + + ++LY+ ++ NP C P+L+Q P Sbjct: 73 MKSMRKMQALAPKMKRIQNKYKGKTDQASKEAMSRETMKLYQDNDANPAGSCLPMLIQGP 132 Query: 439 VFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFY-------LPGFMHV 490 VF +++ +S + + D+A A +FGI+ G + + Sbjct: 133 VFMSMFYTLSAIPYIANGKRGALGAFDVATAKQFTQTDVFGIVSVTDNFSRAATSGKVVI 192 Query: 491 GIWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLII 540 G + +M ++ + A+ Q +L PV+++F+ ++ P +++ Sbjct: 193 GTFVFLMCFCLWFMQYFNMKRNMPAASMNKQAETMQKAMLWLFPVMYIFSGATMPFAVLV 252 Query: 541 YWSWSNVISIVQQAV 555 YW +NV ++ + Sbjct: 253 YWLTNNVCNLCRTLW 267 >gi|332800544|ref|YP_004462043.1| membrane protein insertase, YidC/Oxa1 family [Tepidanaerobacter sp. Re1] gi|332698279|gb|AEE92736.1| membrane protein insertase, YidC/Oxa1 family [Tepidanaerobacter sp. Re1] Length = 209 Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats. Identities = 69/219 (31%), Positives = 110/219 (50%), Gaps = 23/219 (10%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ M LM + ++GIAI+L TV +KL+ P + Q S M+ I P EL+ Sbjct: 3 FLQDLMKQLMDLIFVYTNSYGIAIILLTVLIKLILLPFSFMQINSMKKMQEITPLQQELQ 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 +K+K + L +++LY+ + INP+ GC P+L+Q PV A+++V + Sbjct: 63 KKYKNDK-EKLNMEIMKLYQENKINPMGGCLPLLIQFPVIIALFRVFQTYDFA--GASFL 119 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAMI 519 WI +L+ D T I PI+ +++ +IQ K+S P AD A + Sbjct: 120 WISNLSKPDSTFIL-------------------PILAAVTTYIQTKLSTPAGADNPNASM 160 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MP++ + F AGL +YW SNV+ IVQQ + + Sbjct: 161 NIIMPLMIGWFSVKFAAGLALYWVVSNVVQIVQQLIFAR 199 >gi|227529865|ref|ZP_03959914.1| stage III sporulation protein J precursor [Lactobacillus vaginalis ATCC 49540] gi|227350234|gb|EEJ40525.1| stage III sporulation protein J precursor [Lactobacillus vaginalis ATCC 49540] Length = 276 Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 21/223 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N G +G+ I++ T+ +++L PL Q S + + PK+ Sbjct: 36 WDHYIVYNFSRFIIWLSNNCGGYGMGIIIFTIIIRVLLLPLMFYQTKSMLKTQELAPKLK 95 Query: 398 ELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++K+ + +Q+ +LYK +NP A P+++Q+P+ +A+Y+ I + E+R Sbjct: 96 AIQKKYSSRDRESMVKMQEETSKLYKEAGVNPWASMLPMIIQLPIMWALYQAIWRTPELR 155 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 H F L DP I + L +L ++ + S P + Sbjct: 156 HGTFLWL--QLGHTDPYYILPILAALFTFLSSWLSMA----------------SMPERNA 197 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + +MP++ F F + + +YW SN +VQ ++ Sbjct: 198 MTSAMTWFMPIMVFFMALGFSSAITLYWVVSNAFQVVQTLLLQ 240 >gi|227498802|ref|ZP_03928942.1| sporulation associated-membrane protein [Acidaminococcus sp. D21] gi|226904254|gb|EEH90172.1| sporulation associated-membrane protein [Acidaminococcus sp. D21] Length = 210 Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats. Identities = 64/224 (28%), Positives = 115/224 (51%), Gaps = 27/224 (12%) Query: 341 FIAKPMFMLMSYFYNLV-----GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 F++ + ++S Y ++G+AI++ T+ +KLL +PL K+Q ST M IQP+ Sbjct: 3 FLSSFVQQVVSAIYEATRMIGEPSYGLAIIIMTILIKLLLYPLTKRQIASTKAMSRIQPR 62 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + EL+ +++ L + + +LYK +NPLAGC P+++Q+P+ I+ I Sbjct: 63 MKELQMRYRDDK-MKLNEELSKLYKKEGVNPLAGCLPLVIQMPIMIGIFYGIR-DFNYEG 120 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-K 514 + W++ + DP I PI+ +L+ +IQ + S PP+D Sbjct: 121 PSSFLWMQSIGQPDPYYIL-------------------PILSALTTYIQSRQSMPPSDNP 161 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++L +MP+ + FPAGL++YW N++ I QQ + + Sbjct: 162 TGKVMLYFMPLFIGYISLKFPAGLVLYWVVMNLMQIGQQFFMDR 205 >gi|217077890|ref|YP_002335608.1| inner membrane protein OxaA [Thermosipho africanus TCF52B] gi|217037745|gb|ACJ76267.1| inner membrane protein OxaA [Thermosipho africanus TCF52B] Length = 434 Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 123/298 (41%), Gaps = 26/298 (8%) Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + + S G KF+ N + K ++ G + I D Sbjct: 144 NNIFLSFYSKGDIISIIKFNGNTLGGNSVKGSNLRFLVYIGPYKKTLIKSAFSDDYDLIS 203 Query: 331 EMLID----WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 EML GWF FI P+ + + NFG+ I++ T+ V+ + +PL Q S Sbjct: 204 EMLKTVSGVGGWFDFILYPLVYFFGWINDFTRNFGLTIIVFTIIVRFVLYPLYHSQTKSM 263 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ +QP ++++++K+K PQ Q+ +++ Y+ + INP +GC +Q+P+F +Y+V Sbjct: 264 IKMRKLQPIVEQIKKKYKD--PQKQQQELLKAYRENKINPASGCLMAFVQLPIFIILYQV 321 Query: 447 ISISL-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I E + + + DL A F +L + G + ++ Sbjct: 322 IRYYQEEFAFSGRFLFWNDLTAGG-------FSANWIFLVIQIVAGYYLALI-------- 366 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D A M +F F P+G+ +Y++ + +I + I K + + Sbjct: 367 ----TSQDSRTAWQSIIMSFIFPFLFIGLPSGVFLYYTANTLIQLGITYYIYKRYKIK 420 >gi|317126737|ref|YP_004100849.1| membrane protein insertase, YidC/Oxa1 family [Intrasporangium calvum DSM 43043] gi|315590825|gb|ADU50122.1| membrane protein insertase, YidC/Oxa1 family [Intrasporangium calvum DSM 43043] Length = 373 Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 38/279 (13%) Query: 338 WFYFIAKPM----FMLM---SYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVS 385 +F I P+ +M + ++L+G + ++I+ TV V++L PL +Q S Sbjct: 4 FFNTILYPIKLGEAWVMYAWHWLFDLIGLPTGWAWALSIVGLTVVVRVLLIPLFVRQIHS 63 Query: 386 TANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 + M+ IQP++ ++++K+K + Q ++ LY+ NP + C PILLQ P FF Sbjct: 64 SRKMQLIQPEMQKIQKKYKGKRDPESQKAQQAEIMDLYRRTGTNPFSSCLPILLQSPFFF 123 Query: 442 AIYKVISISLEMRHAPFWG---------WIKDLAAADPTNIFTLFGILPFYLPGF---MH 489 A++++++ + G L+ D + PG + Sbjct: 124 ALFQLLNNLKSIAEGNIKGGGSPVGPITKAVALSIEDSRIFGSRLSDAFLTSPGTSTKIL 183 Query: 490 VGIWPIIMSLSMFIQM-----KMSP-----PPADKGQAMILNWMPVVFVFALSSFPAGLI 539 + MS++ F K P P K Q ++L MP+ F + +FP G++ Sbjct: 184 AAVLIAAMSVTTFTTQHQLMRKNMPASALDNPFAKQQKVLLYLMPIFFAISGVNFPVGVL 243 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 IYW+ +N+ ++ QQ +++ A L + + Sbjct: 244 IYWTTTNLWTMGQQFYVIRNMPAPGSLAYQAMEERDRRK 282 >gi|221321325|ref|ZP_03602619.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. JH642] Length = 259 Score = 174 bits (442), Expect = 3e-41, Method: Composition-based stats. Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ L++Y L G N+G++I+L T+ ++LL PL KQ S+ M+ +QP++ Sbjct: 36 WDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLILPLMIKQLRSSKAMQALQPEM 95 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q LQ+ + L++ H +NPLAGC+PIL+++P+ Y I + + Sbjct: 96 QKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPILIKMPILIGFYHAIMRTQAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 F + DL DP I PI+ ++ F+Q K+ Sbjct: 156 SEHSFLWF--DLGEKDPYYIL-------------------PIVAGVATFVQQKLMMAGNA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + AM+L MP++ + +FPA L +YW N+ I Q +I Sbjct: 195 QQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMIAQTFLIK 241 >gi|220933190|ref|YP_002510098.1| 60 kDa inner membrane insertion protein [Halothermothrix orenii H 168] gi|219994500|gb|ACL71103.1| 60 kDa inner membrane insertion protein [Halothermothrix orenii H 168] Length = 217 Score = 174 bits (442), Expect = 3e-41, Method: Composition-based stats. Identities = 59/220 (26%), Positives = 117/220 (53%), Gaps = 17/220 (7%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 ++ + M + N V N+G+AI++ T+F+KLL +PL KQ S M+++QP++ ++ Sbjct: 2 GWLTEIMTDTLILLNNWVHNYGLAIIILTIFIKLLLYPLTAKQTKSMKAMQDLQPEMKKI 61 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +EK+K + + Q+ M++LY+ HN+NP AGC+P++LQ+ + + +++ IS Sbjct: 62 QEKYKDNK-EKQQEEMMKLYQEHNVNPAAGCFPMILQLFIIWPLFRAIS----------- 109 Query: 460 GWIKDLAAADPTNIFTLFGIL--PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 +KD+ A + + + P + I I M ++ K + + Sbjct: 110 -GLKDIMAPEEATFLWIGNLTEGSLATPDITLIIINVIAMIGQTYLTQKWTGNNSQNN-- 166 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 I+ MP + ++ PAG+++YW V++++QQ +I Sbjct: 167 AIMWVMPFIILWFGFKLPAGVLLYWLTQTVLTVIQQYIIY 206 >gi|291303914|ref|YP_003515192.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis DSM 44728] gi|290573134|gb|ADD46099.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis DSM 44728] Length = 366 Score = 174 bits (442), Expect = 3e-41, Method: Composition-based stats. Identities = 65/234 (27%), Positives = 113/234 (48%), Gaps = 34/234 (14%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + +AI+ V ++++ FPL KQ S M+ +QPK+ EL++++K + LQK M++LY Sbjct: 41 WILAIVFLVVTIRIVLFPLFVKQIKSQRAMQRLQPKMKELQQRYKGD-RETLQKEMMELY 99 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVIS-------------------------ISLEMR 454 +T NPL GC P+LLQ PVF A+ V+ I+ ++ Sbjct: 100 RTEKANPLMGCLPMLLQAPVFIALLWVLRRIDPDKYSNYAKTLYTWTEAQWDSAINAKLF 159 Query: 455 HAPFWGWI----KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 AP W KDL ++ + T L L + + + + L+ + + Sbjct: 160 GAPIWATFLTTQKDLKCSEHYDSCTTAATLNVQLVSGILIALMIVTTYLTTRQMILKTGW 219 Query: 511 PADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 AD Q M +L +PV+ +F+ FP G+++YW +N S+ QQ +++ + Sbjct: 220 NADPQQRMIQKLMLYGIPVMLLFSGGIFPIGVVLYWVVNNAFSLGQQIWVLRKY 273 >gi|15616626|ref|NP_244932.1| OxaA-like protein precursor [Bacillus halodurans C-125] gi|38503226|sp|Q9RCA5|OXAA1_BACHD RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|5672644|dbj|BAA82682.1| 62%-identity [Bacillus halodurans] gi|10176689|dbj|BAB07783.1| stage III sporulation protein J [Bacillus halodurans C-125] Length = 257 Score = 174 bits (442), Expect = 3e-41, Method: Composition-based stats. Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 26/224 (11%) Query: 338 WFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ LM YF N G+FG+AI++ T+ ++LL PL KQ ST M+ +QP++ Sbjct: 36 WDSYFVYPLSWLMIYFANAFNGSFGLAIIVVTLLIRLLILPLMIKQLKSTRAMQALQPEM 95 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 LREK+ Q LQ+ + L++ H +NPLAGC+P+L+Q+P+ A Y I + E+ Sbjct: 96 QALREKYSAKDQRTQQKLQQETMALFQKHGVNPLAGCFPVLIQMPILLAFYHAIMRTREI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 F ++ L DP + PII ++ F+Q KM + Sbjct: 156 GDEHFLWFV--LNQPDPI--------------------LLPIIAGITTFLQQKMMMVTDN 193 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++L MPV+ + P+ L +YW N+ I+Q I Sbjct: 194 PQMKVLLYVMPVMILVFAMFLPSSLALYWVIGNLFMILQTYFIT 237 >gi|299820845|ref|ZP_07052734.1| stage III sporulation protein J [Listeria grayi DSM 20601] gi|299817866|gb|EFI85101.1| stage III sporulation protein J [Listeria grayi DSM 20601] Length = 282 Score = 174 bits (442), Expect = 3e-41, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 28/233 (12%) Query: 338 WFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ L+ +F NL G++ I I++ T+ ++L+ PL KQ S M IQPK+ Sbjct: 37 WSHYIVFPLSWLIRWFSDNLGGSYAIGIIVVTIIIRLIIMPLMIKQIKSQKEMTKIQPKM 96 Query: 397 DELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ Q LQ+ ++LY+ HN+NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 97 KELQQKYASKDNETKQKLQQETMRLYQEHNVNPMMGCLPLLIQMPILIGFYQAISRTAEI 156 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F L D I PI+ +++ F K M Sbjct: 157 KSDTFLWMT--LGHPDQFFIL-------------------PILAAITTFFSSKIGMMGQV 195 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +K AMI MPV+ + S P+ L +YW N+ + +Q +I + Sbjct: 196 QQNKSMAMITYIMPVMILVMGISLPSALALYWIIGNIFTFLQTLLINNPFKNK 248 >gi|164686450|ref|ZP_02210478.1| hypothetical protein CLOBAR_00015 [Clostridium bartlettii DSM 16795] gi|164604461|gb|EDQ97926.1| hypothetical protein CLOBAR_00015 [Clostridium bartlettii DSM 16795] Length = 254 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 58/224 (25%), Positives = 110/224 (49%), Gaps = 8/224 (3%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I + +++ + N+VG++ +I++ T+ V+L PL KQ ST M++IQPK+ E++E Sbjct: 5 IGNFLGVILGFIVNIVGDYAWSIIIFTILVRLCLMPLMIKQIKSTKAMQDIQPKMQEIQE 64 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K P+ Q+ +++LYK INP+AGC P+ +Q+P+ ++ ++ + G Sbjct: 65 KYKN-KPEKQQEELMKLYKDAKINPMAGCLPMFIQLPILMGLFALLRDPVA------HGV 117 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 AA N I + +GI + + M M + + + Sbjct: 118 FATEAAYHAAN-HGFLWIASVSQTHNLSLGILSGVSAYFMQKSMATTDESQAQMMKSMTL 176 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 M + + ++ AGL +YW+ SN+ SI Q ++ A++ Sbjct: 177 VMTAMSFWWGYTYEAGLALYWTMSNIFSIAQYYLVTSPLKAKMA 220 >gi|257057913|ref|YP_003135745.1| preprotein translocase subunit YidC [Saccharomonospora viridis DSM 43017] gi|256587785|gb|ACU98918.1| preprotein translocase subunit YidC [Saccharomonospora viridis DSM 43017] Length = 346 Score = 174 bits (441), Expect = 4e-41, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 104/271 (38%), Gaps = 37/271 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ ++ + G + + I+ T V+ L F Q S M Sbjct: 2 LDFIYYPVSFILWVWHKVFGFVFGEDNAIAWVLGIVFLTFTVRGLLFKPFVNQVRSMRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ P++ +++K+ Q + +L + H +NP C PILLQIPVF + V+ Sbjct: 62 QDFAPEVKRIQKKYAND-RQRQAMELQRLQREHGVNPFGSCLPILLQIPVFIGLNWVLRN 120 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTL---------------------FGILPFYLPGFM 488 + ++ D+A+ IF + + + P +P + Sbjct: 121 FRPGAESNYFFDADDVASYVDAQIFGINLGDAINHLGLAGGGGDSGWNWDVAPLAVPLMI 180 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSW 544 GI + + + +P A A++ L P V + FP GL+IYW Sbjct: 181 VAGIATHLTARHSVA--RQNPASATPQTAVMNRLTLYVFPAGVVVFGAFFPIGLLIYWLA 238 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 +NV ++ QQ + K E + Sbjct: 239 NNVWTLGQQRFVYKKIDKEEEAKRQAAKEKR 269 >gi|255547956|ref|XP_002515035.1| conserved hypothetical protein [Ricinus communis] gi|223546086|gb|EEF47589.1| conserved hypothetical protein [Ricinus communis] Length = 499 Score = 174 bits (441), Expect = 4e-41, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 115/266 (43%), Gaps = 26/266 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W I M ++ N + +G AI+L TV VK FPL KKQ S M++ Sbjct: 107 WLSGITSYMETVLKVLQNGLSGLHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRS 166 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP+I +++++ + + +Q +LYK INP AGC P L IPV+ +Y+ +S Sbjct: 167 LQPQIKAIQQQYAGN-QEKIQLETARLYKLAGINPFAGCLPTLATIPVWIGLYRALSNVA 225 Query: 452 -EMRHAPFWGWIKDLAAADPT----NIFTLFGILPFYLPGFMHVGIWPIIMSLS------ 500 E + WI LA N + + PF + G +G + L Sbjct: 226 DEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPF-VDGHPPLGWYDTFAYLVLPVLLV 284 Query: 501 -------MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +Q + P K I +P++ + S P+GL +YW +N++S QQ Sbjct: 285 VSQYISVQIMQSSQNNDPNMKSSQAITQLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQ 344 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYN 579 + K+ GA+ + K+ + Sbjct: 345 VWLQKLGGAKNPVSQEDHLRVQKSVD 370 >gi|302390793|ref|YP_003826614.1| membrane protein insertase, YidC/Oxa1 family [Thermosediminibacter oceani DSM 16646] gi|302201421|gb|ADL08991.1| membrane protein insertase, YidC/Oxa1 family [Thermosediminibacter oceani DSM 16646] Length = 209 Score = 174 bits (441), Expect = 4e-41, Method: Composition-based stats. Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 23/214 (10%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + ++ + + ++G+AI++ T +KL+ P + +Q+ S M+ I P +L+EK+K Sbjct: 8 LKQILDFLFLYTKSYGVAIIVLTALIKLVLLPFSFQQFQSIKKMQEIAPLQKKLQEKYKN 67 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + L + +++LY+ + +NP+ GC P+L+Q P A++ ++ + WI DL Sbjct: 68 DK-EKLNRELLKLYQENKVNPMGGCLPLLIQFPFIIALFSLLQHHNFGNEG--FLWIADL 124 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQAMILNWMP 524 A D T + P++ +++ ++ K+ P D Q+ + M Sbjct: 125 GAPDRTFVL-------------------PLLAAVTTYVSSKIGMPQNPDNPQSSMNLIMS 165 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V + FP+GL +YW SN+I I+QQ +IM+ Sbjct: 166 AVIGWMALKFPSGLALYWVVSNLIQILQQVIIMR 199 >gi|258646360|ref|ZP_05733829.1| stage III sporulation protein J [Dialister invisus DSM 15470] gi|260403758|gb|EEW97305.1| stage III sporulation protein J [Dialister invisus DSM 15470] Length = 306 Score = 174 bits (441), Expect = 4e-41, Method: Composition-based stats. Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 24/231 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLV-----GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 IA M + + Y N+ IAI++ T+ +K L PLA KQ S M+ I Sbjct: 20 IVGMIADLMRIGLQICYEFTSGLGFPNYVIAIVVLTILIKTLLLPLAVKQIRSMKAMQAI 79 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP+I ++++K++ P ++++ M +LYK HN +P+AGC P+L+Q+P A+Y I Sbjct: 80 QPEIQKIQKKYRNDPA-MMRQEMGRLYKEHNASPMAGCLPLLIQMPFLIAMYYAIQGFSY 138 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + WI+ LAA D T I + +L + + +P A Sbjct: 139 DPLHAGFLWIESLAAEDGTYILPVLSAASTFLVSW------------------QTTPKDA 180 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q +L MP++ + FP+GL+IYW SN+ QQ ++ + + Sbjct: 181 PGNQKTMLFMMPLMIGWMSLHFPSGLVIYWVVSNIYQFFQQLIMFRGEKGK 231 >gi|296455143|ref|YP_003662287.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. longum JDM301] gi|296184575|gb|ADH01457.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. longum JDM301] Length = 335 Score = 174 bits (441), Expect = 4e-41, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 35/255 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-------------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WG+ Y I P+ L ++ +V ++ +AI++ + V+ FPL KQ Sbjct: 13 WGFLYKILTPVEWLQTWIMKIVHDFFAMLGMSPIGVSWVLAIIILVLVVQACIFPLFYKQ 72 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIP 438 S M+ + PK+ ++ K+K Q + + ++LY+ ++ NP C P+L+Q P Sbjct: 73 MKSMRKMQALAPKMQRIQNKYKGKTDQASKEAMSRETMKLYQDNDANPAGSCLPMLIQGP 132 Query: 439 VFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFY-------LPGFMHV 490 VF +++ +S + + D+A A +FGI+ G + + Sbjct: 133 VFMSMFYTLSAIPYIANGKRDALGAFDVATAKQFTQTDVFGIVSVTDNFTRASTAGKVVI 192 Query: 491 GIWPIIMS----LSMFIQMKMSPPPA------DKGQAMILNWMPVVFVFALSSFPAGLII 540 GI+ +M L +I MK + A + Q +L PV+++F+ SFP +++ Sbjct: 193 GIFVFLMCFCLWLIQYINMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGVSFPFAVLV 252 Query: 541 YWSWSNVISIVQQAV 555 YW +NV ++ + Sbjct: 253 YWLTNNVCNLCRTLW 267 >gi|257792846|ref|YP_003183452.1| 60 kDa inner membrane insertion protein [Eggerthella lenta DSM 2243] gi|317489239|ref|ZP_07947756.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp. 1_3_56FAA] gi|325832339|ref|ZP_08165338.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1] gi|257476743|gb|ACV57063.1| 60 kDa inner membrane insertion protein [Eggerthella lenta DSM 2243] gi|316911640|gb|EFV33232.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp. 1_3_56FAA] gi|325486175|gb|EGC88629.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1] Length = 261 Score = 174 bits (440), Expect = 5e-41, Method: Composition-based stats. Identities = 69/227 (30%), Positives = 115/227 (50%), Gaps = 9/227 (3%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F ++ +FY+ G++G+AI++ TV ++L PL KQ S+ M+ +QP + EL+ K+ Sbjct: 8 WIFDIIHFFYDFCGDWGLAIIIVTVIFRILISPLMHKQTKSSFQMQKVQPLMQELQRKYA 67 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP---FWGW 461 P+ LQ+ M +LY NPLAGC P+LLQ+P+F A+++V+S F+ Sbjct: 68 DDQPR-LQEEMQKLYAEVKFNPLAGCLPMLLQMPIFMALFQVLSEMGSRTSGTTYEFYNL 126 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + L + FG YL + + + M QM P K ++ Sbjct: 127 VPSLVMRPSEALAVGFGTFVPYLILMVIFAGATFLPMVLM--QMGNKDNPQRKQTMIMAA 184 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV---IMKMHGAEIG 565 M V ++ S PAG++++W S+++ I QQ + IMK AE Sbjct: 185 VMSVFMLWISWSSPAGVLLFWGASSLMGIAQQQISMRIMKKRDAEAA 231 >gi|281412770|ref|YP_003346849.1| membrane protein insertase, YidC/Oxa1 family [Thermotoga naphthophila RKU-10] gi|281373873|gb|ADA67435.1| membrane protein insertase, YidC/Oxa1 family [Thermotoga naphthophila RKU-10] Length = 443 Score = 174 bits (440), Expect = 5e-41, Method: Composition-based stats. Identities = 86/478 (17%), Positives = 184/478 (38%), Gaps = 97/478 (20%) Query: 96 GYHLDVSSN--SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 YH D+ TL+ Y + ++ + T +I I+T Sbjct: 39 EYHFDLEKGILKDFYTLVDGRKHVFTY--------GNDGFDVLDEGTPLTVIEEPIVTGV 90 Query: 154 TPIKLVFKNANNILF-----ERTISL--DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK 206 + F + +I++ ++ ++ DE+Y F + S + + + R Sbjct: 91 GKVSEGFSDEVSIVYNYGYVKKIFTIKNDENYTFFVDIE----SSKPVEVT----VPRVS 142 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 T+T+ + ++ F + ++ + Sbjct: 143 VDTSTDRY-LENYFASFNPGTR--------------------------------TLVLLK 169 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + +G R+ N+ T++ +++ + + + Sbjct: 170 HDEGLLFEGTLKINGQKRFIVFMGPNKRTLIKKAF----------PEDYDVL--IKALVK 217 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 IP F W+ + + + +L NFG AI+L T+ V+L+ +PL Q S Sbjct: 218 IPGFNK-----WYDPVFYGLVWFFWWLKDLTKNFGWAIVLFTLIVRLILYPLYHAQTKSL 272 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 NM+ +QP+I+ +++K+K P Q+A+++LY+ +NP +GC +L+Q+P+F ++ V Sbjct: 273 INMRKLQPQIEAIKKKYKD--PTKQQEALLKLYREAGVNPASGCLMLLIQLPIFMLLWSV 330 Query: 447 ISISL-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I + E ++ + KDL+A GF + ++ II ++ + Sbjct: 331 IRYYVEEFAYSGNFLIWKDLSAG-----------------GFSNNWLFLIITIVASYYTT 373 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ A I M V+F F P+GL +Y++ + +I + K + + Sbjct: 374 LLTSQDARTAWQGI--IMSVIFPFLFVGLPSGLFLYYATNTLIQLAVTYYTYKRYKIK 429 >gi|163791581|ref|ZP_02185983.1| Membrane protein chaperone oxaA [Carnobacterium sp. AT7] gi|159873159|gb|EDP67261.1| Membrane protein chaperone oxaA [Carnobacterium sp. AT7] Length = 275 Score = 174 bits (440), Expect = 5e-41, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 112/244 (45%), Gaps = 22/244 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I ++ + NL G ++G+ I++ T+ ++L+ P+ Q ST M +QP++ Sbjct: 36 WDKYIIFNFSRIIVWLSNLFGGSYGVGIIIFTLIIRLILLPVMHGQTKSTRKMAELQPQL 95 Query: 397 DELREKF--KQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ K + Q L++ +LY +NP+AGC P+L+Q+PV A+Y+ IS + + Sbjct: 96 KELQTKYASKDTDTQNKLKEETSKLYSEAGVNPVAGCLPLLIQMPVLIAMYQAISRTEVL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F +L A DP I + + Y + MS ++ Sbjct: 156 KTGNFLWM--NLGAPDPLFILPVIAAILTYATTKLST----------------MSQAESN 197 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++ MP + +F + P+ L +YW N S+ Q ++ +++++ Sbjct: 198 PTTTTMMYMMPALILFMGITLPSALSLYWVVGNAFSVGQTMLLNNPFKIIKEREEKIQAE 257 Query: 574 FSKN 577 + Sbjct: 258 RDRK 261 >gi|313902790|ref|ZP_07836187.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter subterraneus DSM 13965] gi|313466910|gb|EFR62427.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter subterraneus DSM 13965] Length = 219 Score = 174 bits (440), Expect = 5e-41, Method: Composition-based stats. Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 27/230 (11%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W WF + + L + G+ G++I+L TV V+L+ PL Q S M+ +QP+ Sbjct: 5 WQWFVDLIEAGLELSR---SATGSAGLSIILFTVLVRLVLLPLTFSQTRSMQRMQALQPE 61 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 ++ +++K+K +P Q +A++QL++ +N+NP AGC P+L+Q P+ +A++ Sbjct: 62 VERIQKKYKNNP-QKANEAIMQLWRENNVNPAAGCLPLLIQFPILYALFIAFRDF----S 116 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + WI DL DP + P++ ++ + QMK S Sbjct: 117 IGSFLWIPDLGKPDPWFVL-------------------PVLAGVTTYFQMKTSMTTVQPQ 157 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 Q +L MP + F SFPAGL +YW SN+ SIVQQ ++ + Sbjct: 158 QRTMLVLMPAMLTFFAWSFPAGLALYWVTSNIFSIVQQVLMNRRPAPAPA 207 >gi|256848509|ref|ZP_05553951.1| cell division protein [Lactobacillus coleohominis 101-4-CHN] gi|256714776|gb|EEU29755.1| cell division protein [Lactobacillus coleohominis 101-4-CHN] Length = 277 Score = 174 bits (440), Expect = 5e-41, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 105/245 (42%), Gaps = 21/245 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N G +G+ I++ T+ ++++ PL Q S M+ + P++ Sbjct: 37 WDHYIIYNCSRFIIWLSNHFGGYGMGIIIFTIIIRIIILPLMYYQTKSMMRMQELAPELK 96 Query: 398 ELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +L++K+ + +QK +LYK +NP A P+++Q+PV +A+Y+ I + +R Sbjct: 97 KLQKKYSSRDRETMQKLQVEQQKLYKEAGVNPFASMLPLIVQLPVMWALYQAIWRTSTLR 156 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 H F L DP + + L ++ ++ + S P + Sbjct: 157 HGTFLWL--QLGRPDPYYVLPILAALFTFISSWLSMA----------------SMPEKNS 198 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 + +MP++ F F + + +YW +N +VQ ++ + R+ Sbjct: 199 MSTAMTWFMPIMIFFMALGFSSAITLYWVVTNAFQVVQTLLLQNPFKIRREREAKQRAER 258 Query: 575 SKNYN 579 + Sbjct: 259 QRKNK 263 >gi|116334864|ref|YP_796391.1| preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367] gi|116100211|gb|ABJ65360.1| Preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367] Length = 277 Score = 174 bits (440), Expect = 6e-41, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 104/249 (41%), Gaps = 24/249 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W I + + +L G ++G+ I+ T+ ++++ PL Q S + +QP++ Sbjct: 36 WDGLIVLNFSRAIIWLAHLFGGSYGVGIIAFTIIIRVILMPLMIFQTRSMRKTQEVQPQL 95 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ Q LQ +LY INP+ GC P L+Q+P+ +A+Y+ I + + Sbjct: 96 KALQKKYSSKDRETMQKLQAEQQKLYSEAGINPMMGCLPALVQLPIIWALYQAIWRTAVL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R F L DP I + L +L ++ S P + Sbjct: 156 RSGTFLWL--QLGHKDPYFILPILAALATFLSSWL----------------TTKSAPETN 197 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK--MHGAEIGLIDRLR 571 M++ MPVV F + + L +YW+ S V + Q +I AE ++ + Sbjct: 198 SMNTMMIVGMPVVVFFTAMNVASSLSLYWTVSYVFQVGQTLLIQNPWKIQAERDAKEKEK 257 Query: 572 STFSKNYNS 580 + + Sbjct: 258 AQHDRTVKK 266 >gi|331268192|ref|YP_004394684.1| membrane protein oxaA [Clostridium botulinum BKT015925] gi|329124742|gb|AEB74687.1| Membrane protein oxaA [Clostridium botulinum BKT015925] Length = 220 Score = 173 bits (439), Expect = 6e-41, Method: Composition-based stats. Identities = 57/226 (25%), Positives = 110/226 (48%), Gaps = 12/226 (5%) Query: 348 MLMSYFYNLVGN----FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 M+ S+ + L N +G+ I++ T+ ++++ FPL KQ S M IQP++ +L+EK+ Sbjct: 1 MIHSWVHTLFTNPNISYGLTIIVLTLIIRIVLFPLNYKQIKSQVGMTEIQPELKKLQEKY 60 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K P Q Q+ M++LYK + +NPL GC P+L+Q P+ A++ V + ++ + Sbjct: 61 KNDP-QRQQQEMMKLYKEYGVNPLGGCLPLLVQWPILIALFYVFNNLSKIEPSIVNVTFL 119 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NW 522 + +P + P Y ++ + ++ S I + A Q ++ + Sbjct: 120 GVKLMEPAI------LKPEYWYTWILPIVSALLTYFSTVIMTSKNADSAQVKQTKMMSGF 173 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 M + V+ FP L++YW +++ I Q + + + LI Sbjct: 174 MTLFVVYMSFKFPTALVLYWITNSLFQIGQTIITQRSQQKKKELIQ 219 >gi|303228587|ref|ZP_07315414.1| putative OxaA-like protein [Veillonella atypica ACS-134-V-Col7a] gi|303230686|ref|ZP_07317436.1| putative OxaA-like protein [Veillonella atypica ACS-049-V-Sch6] gi|302514741|gb|EFL56733.1| putative OxaA-like protein [Veillonella atypica ACS-049-V-Sch6] gi|302516766|gb|EFL58681.1| putative OxaA-like protein [Veillonella atypica ACS-134-V-Col7a] Length = 218 Score = 173 bits (439), Expect = 6e-41, Method: Composition-based stats. Identities = 74/227 (32%), Positives = 112/227 (49%), Gaps = 23/227 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLV-----GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 F ++ + M L++Y +N ++G+AI++ TV +K + PL KQ S M+ + Sbjct: 3 IFNYLVEFMRTLVTYAFNFTDMVGFPSYGVAIIIITVIIKAILAPLTVKQIKSMKAMQEL 62 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP++ EL+EK+K P Q LQ M +YK +NPLAGC P+L+Q+P AI+ + Sbjct: 63 QPRMKELQEKYKNDP-QRLQAEMGAMYKEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPY 121 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + W+ L ADP I + L +L M Q M A Sbjct: 122 NPEFEHFLWLPSLGEADPYYILPVLSALSTWL----------------MSRQTGMGASGA 165 Query: 513 DKGQAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q I+ +MP+ + +FP+GL+IYW SNV +VQQ I K Sbjct: 166 AAQQQKIMQIFMPLFIGYISLNFPSGLVIYWIVSNVFQLVQQHFIYK 212 >gi|283458991|ref|YP_003363641.1| preprotein translocase subunit YidC [Rothia mucilaginosa DY-18] gi|283135056|dbj|BAI65821.1| preprotein translocase subunit YidC [Rothia mucilaginosa DY-18] Length = 329 Score = 173 bits (439), Expect = 6e-41, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 31/251 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVG-------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 F +I + L + +G + + I+ T+ ++ L PL KQ + M Sbjct: 11 FKWIVSVVLWLFHTLFTSLGMDPASGLTWVLCIIFLTLVMRTLTIPLFVKQIKAMRGMTA 70 Query: 392 IQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +Q + +L+EK+K Q + + +++Y+ H NP A C PIL Q+P+FF +Y+V+ Sbjct: 71 MQGDMAKLQEKYKGKKDQLSRQAMAQEQMEMYRKHGTNPFASCLPILAQMPIFFGLYQVL 130 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI----------WPIIM 497 + N +FG F G ++M Sbjct: 131 MSVPTAAQNNQGVLMLPAELVHQFNDSQIFGAQLFATMMHPGAGDATATVVQAVIMIVLM 190 Query: 498 SLSMFIQMK------MS----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 S + F K MS P + Q MI+ P++F + +FP G++ YW+ SN+ Sbjct: 191 SATQFYIQKQLSVKNMSEAALNSPMFRQQQMIMYIFPIIFAVSGINFPLGVLYYWTVSNL 250 Query: 548 ISIVQQAVIMK 558 S+ QQ +++ Sbjct: 251 WSLGQQWWVIR 261 >gi|148270463|ref|YP_001244923.1| 60 kDa inner membrane insertion protein [Thermotoga petrophila RKU-1] gi|170289142|ref|YP_001739380.1| 60 kDa inner membrane insertion protein [Thermotoga sp. RQ2] gi|147736007|gb|ABQ47347.1| 60 kDa inner membrane insertion protein [Thermotoga petrophila RKU-1] gi|170176645|gb|ACB09697.1| 60 kDa inner membrane insertion protein [Thermotoga sp. RQ2] Length = 443 Score = 173 bits (439), Expect = 7e-41, Method: Composition-based stats. Identities = 86/478 (17%), Positives = 184/478 (38%), Gaps = 97/478 (20%) Query: 96 GYHLDVSSN--SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 YH D+ TL+ Y + ++ + T +I I+T Sbjct: 39 EYHFDLEKGILKDFYTLVDGRKHVFTY--------GNDGFDVLDEGTPLTVIEEPIVTGV 90 Query: 154 TPIKLVFKNANNILF-----ERTISL--DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK 206 + F + +I++ ++ ++ DE+Y F + S + + + R Sbjct: 91 GKVSEGFSDEVSIVYNYGYVKKIFTIKNDENYTFFVDIE----SSKPVEVT----VPRVS 142 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 T+T+ + ++ F + ++ + Sbjct: 143 VDTSTDRY-LENYFASFNPGTR--------------------------------TLVLLK 169 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + +G R+ N+ T++ +++ + + + Sbjct: 170 HDEGLLFEGTLKINGQKRFIVFMGPNKRTLIKKAF----------PEDYDVL--IKALVK 217 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 IP F W+ + + + +L NFG AI+L T+ V+L+ +PL Q S Sbjct: 218 IPGFNK-----WYDPVFYGLVWFFWWLKDLTKNFGWAIVLFTLIVRLILYPLYHAQTKSL 272 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 NM+ +QP+I+ +++K+K P Q+A+++LY+ +NP +GC +L+Q+P+F ++ V Sbjct: 273 INMRKLQPQIEAIKKKYKD--PTKQQEALLKLYREAGVNPASGCLMLLIQLPIFMLLWSV 330 Query: 447 ISISL-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I + E ++ + KDL+A GF + ++ II ++ + Sbjct: 331 IRYYVEEFAYSGNFLIWKDLSAG-----------------GFSNNWLFLIITIVASYYTT 373 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ A I M V+F F P+GL +Y++ + +I + K + + Sbjct: 374 LLTSQDARTAWQGI--IMSVIFPFLFVGLPSGLFLYYATNTLIQLAVTYYTYKRYKIK 429 >gi|119718914|ref|YP_925879.1| putative inner membrane protein translocase component YidC [Nocardioides sp. JS614] gi|119539575|gb|ABL84192.1| 60 kDa inner membrane insertion protein [Nocardioides sp. JS614] Length = 363 Score = 173 bits (439), Expect = 7e-41, Method: Composition-based stats. Identities = 60/238 (25%), Positives = 116/238 (48%), Gaps = 18/238 (7%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + ++I+ T+ V+ L PL KQ S+ NM+ IQPK+ EL++K+ + L + ++LY Sbjct: 43 WVLSIIGLTLTVRALLIPLFVKQIKSSRNMQLIQPKVKELQKKYGHD-RERLAQETMKLY 101 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA-AADPTNIFTLFG 478 K NP A C P+++Q+P+F A+++++ R KDLA + ++F++ Sbjct: 102 KDSGTNPFASCLPLIIQMPIFLALFRLLDKHAA-RGDGKAFITKDLAESFQSADLFSVPL 160 Query: 479 ILPFY-----LPGFMHVGIWPIIMSLSMFIQM-----KMSPP-----PADKGQAMILNWM 523 F + I + M+ + F K PP P + Q ++L + Sbjct: 161 KATFLRNDGSTAVMVVAAILVLAMTATTFTTQRQLMSKNMPPDALSGPYAQQQKLLLYVL 220 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 PVVF +FP ++ YW+ SN+ ++ QQ +++ + A + ++ + ++ Sbjct: 221 PVVFAVGGIAFPVAVLFYWTTSNLWTMGQQFYVIRNNPAPGTAAAQAKADRDRAKAAR 278 >gi|117929365|ref|YP_873916.1| 60 kDa inner membrane insertion protein [Acidothermus cellulolyticus 11B] gi|117649828|gb|ABK53930.1| 60 kDa inner membrane insertion protein [Acidothermus cellulolyticus 11B] Length = 315 Score = 173 bits (439), Expect = 7e-41, Method: Composition-based stats. Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 48/265 (18%) Query: 346 MFMLMSYFYNLVG--------------------NFGIAIMLTTVFVKLLFFPLAKKQYVS 385 M L+++ Y LV +G++++L TV V++L FPL KQ S Sbjct: 1 MPHLLNWLYELVTRVLLALHAALAPAFGTSSGVTWGLSVVLLTVIVRILLFPLFVKQVRS 60 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 M + PK+ EL+ K+K + L + LY+ H +NP GC PIL Q PVF+A++ Sbjct: 61 QRAMTELAPKLKELQAKYKND-RERLGTETMALYREHGVNPFMGCLPILAQAPVFYALFH 119 Query: 446 VISI--------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG----------- 486 V+ H + + L +A +F + L F Sbjct: 120 VLRYVSDHGSSKPPAGFHPEYGWTVSLLQSAGHAKVFGVPLALGFRTADRAPMFGADSTT 179 Query: 487 -FMHVGIWPIIMSLSMFIQMKM-------SPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 + + + M+ + F+ + + P + Q M+L +P +F + + G+ Sbjct: 180 VHVVTLLAILAMATTTFLTQRQLIVKNAAAGNPMAQQQKMLLYVLPPIFALSGLLWQMGV 239 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAE 563 ++YW SN+ S+ QQ I++ + Sbjct: 240 LVYWVTSNLWSLGQQHYIIRTMPIK 264 >gi|255326485|ref|ZP_05367567.1| 60 kDa inner membrane insertion protein [Rothia mucilaginosa ATCC 25296] gi|255296525|gb|EET75860.1| 60 kDa inner membrane insertion protein [Rothia mucilaginosa ATCC 25296] Length = 329 Score = 173 bits (439), Expect = 7e-41, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 31/251 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVG-------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 F +I + L + +G + + I+ T+ ++ L PL KQ + M Sbjct: 11 FKWIVSVVLWLFHTLFTSLGMDPASGLTWVLCIIFLTLVMRTLTIPLFVKQIKAMRGMTA 70 Query: 392 IQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +Q + +L+EK+K Q + + +++Y+ H NP A C PIL Q+P+FF +Y+V+ Sbjct: 71 MQGDMAKLQEKYKGKKDQLSRQAMAQEQMEMYRKHGTNPFASCLPILAQMPIFFGLYQVL 130 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI----------WPIIM 497 + + N +FG F G ++M Sbjct: 131 MGVPTAAQSNESVLMLPADLVHQFNDSQIFGAQLFATMLHPGAGDTTATVVQAVIMIVLM 190 Query: 498 SLSMFIQMK------MS----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 S + F K MS P + Q MI+ P++F + +FP G++ YW+ SN+ Sbjct: 191 SATQFYIQKQLSVKNMSEAALNSPMFRQQQMIMYIFPIIFAVSGINFPLGVMYYWTVSNL 250 Query: 548 ISIVQQAVIMK 558 S+ QQ +++ Sbjct: 251 WSLGQQWWVIR 261 >gi|226355228|ref|YP_002784968.1| 60 kDa inner membrane insertion protein [Deinococcus deserti VCD115] gi|226317218|gb|ACO45214.1| putative 60 kDa inner membrane insertion protein, Membrane protein OxaA [Deinococcus deserti VCD115] Length = 542 Score = 173 bits (439), Expect = 7e-41, Method: Composition-based stats. Identities = 98/481 (20%), Positives = 179/481 (37%), Gaps = 56/481 (11%) Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 L + + N V A+ ++ TV L + Sbjct: 90 DFSALKNGKSIINMVGTRKSLVVQADGLDPAQPATVTTPKVTSDLPKNRQDAVFRYTQGG 149 Query: 166 ILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 I +T++L +Y + +V +Q G P+ + Sbjct: 150 ITVTKTVTLHPRNYKMDVRTSVE-GGPEQYTLLFPGLGNAENPRVQALPASGEPAAAQGS 208 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 G + +Y+ +++ NS + + A++ P + T G Sbjct: 209 GTLEVENIQYAALQE----VPSGMNSQVAL-----ATIVRPQQGTRADVALTGGRQG--- 256 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 I ++ ++ G E ++ L + +F I+ Sbjct: 257 ----------LIQVRLEGDSSLEVYGGRNELIHLYQ----SGYTELPGLFEPNFFGKISL 302 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + LM Y +GN+G+ ++ T+ ++L+ +PL + Q +TA M+ +QPKI E++EK+K Sbjct: 303 MIVKLMESLYKFIGNWGLVLVALTLLLRLIMWPLMQAQGRTTARMQIMQPKIKEIQEKYK 362 Query: 405 QSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 + +Q M QLY+ +N NP AGC+ LL PV A++ I + Sbjct: 363 DKRDMESQRAMQSEMQQLYRDYNFNP-AGCFSTLLPFPVLIALWSTIRNFEF---DSGFL 418 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 W+ DLA DP I L + ++ +++ + +P K QA I Sbjct: 419 WLPDLAIPDPFYILALI---------------YLVVNIGQLYVMTRKTPD-MFKQQAFIY 462 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 ++F++ +FPAG+ IY S +I I+QQ +I K E + + S Sbjct: 463 ----LIFLYFALTFPAGVTIYIILSTLIGIIQQVIINKQVERETANLGQTVQKASAGGKG 518 Query: 581 Q 581 Q Sbjct: 519 Q 519 >gi|256391922|ref|YP_003113486.1| hypothetical protein Caci_2731 [Catenulispora acidiphila DSM 44928] gi|256358148|gb|ACU71645.1| 60 kDa inner membrane insertion protein [Catenulispora acidiphila DSM 44928] Length = 334 Score = 173 bits (439), Expect = 7e-41, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 113/255 (44%), Gaps = 39/255 (15%) Query: 342 IAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 I + +M ++ + G ++ ++I+ T+ ++ PL +KQ S +M+ + Sbjct: 11 IIWAVSFVMVLWHRVFGAIFGEGSSVSWVLSILFLTITIRAAMIPLFRKQIKSMQHMQRL 70 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP++ L++K+K Q LQ+ ++LYK + +P A C PIL+Q+P F A+Y+V+S + Sbjct: 71 QPQLQALQKKYKLDK-QKLQQETMKLYKDNGTSPFASCIPILVQLPFFTALYRVLSHAAS 129 Query: 453 MR--------HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF----------MHVGIWP 494 R A A P FT L G + + Sbjct: 130 GRAVGALSQADATNIQHSTFFGAPIPLRFFTTQTYLNTAANGQFAHTSLVNLRIVALVMV 189 Query: 495 IIMSLSMFIQMKMS-----------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 ++ + S F+ +M P P + Q ++L MPV +F S G+++Y Sbjct: 190 VLYAASQFLTQRMMLTKNTNLDNSVPNPMMQSQKIMLYVMPVGMLFFGLSVQIGVVLYLM 249 Query: 544 WSNVISIVQQAVIMK 558 +NV +I QQ ++ Sbjct: 250 TTNVWTIGQQFYTLR 264 >gi|294500761|ref|YP_003564461.1| membrane protein OxaA [Bacillus megaterium QM B1551] gi|295706106|ref|YP_003599181.1| membrane protein OxaA [Bacillus megaterium DSM 319] gi|294350698|gb|ADE71027.1| membrane protein OxaA [Bacillus megaterium QM B1551] gi|294803765|gb|ADF40831.1| membrane protein OxaA [Bacillus megaterium DSM 319] Length = 272 Score = 173 bits (439), Expect = 7e-41, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 114/229 (49%), Gaps = 27/229 (11%) Query: 338 WFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ M ++ G++G++I++ TV ++L+ PL KQ ST M+ ++P++ Sbjct: 38 WDHYFVYPLSMALTKIAEWAGGSYGLSIIIATVIIRLVLLPLILKQQKSTMAMQALRPEM 97 Query: 397 DELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 +++++K+ Q QK M+QLY+TH INP+ GC PI +Q+P+ A Y I+ + E Sbjct: 98 EKIQKKYAGKKDPETQQKQQKEMMQLYQTHKINPVGGCLPIFIQMPIIIAFYNAIARTHE 157 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + F L DP I P++ +++ F+Q+++S Sbjct: 158 IAQHSFLWV--SLGKPDPYFIL-------------------PVVAAITTFLQIRVSMTDE 196 Query: 513 -DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 M++N MP+ + A S P+ L +YW N+ I Q + K Sbjct: 197 IQPPMKMMMNIMPIFILVAGISLPSALALYWVIGNLFGIGQGYYLKKRM 245 >gi|257871385|ref|ZP_05651038.1| inner membrane protein [Enterococcus gallinarum EG2] gi|257805549|gb|EEV34371.1| inner membrane protein [Enterococcus gallinarum EG2] Length = 274 Score = 173 bits (438), Expect = 8e-41, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 23/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + GN GI I+L T+ ++++ PL Q S + +QPK+ Sbjct: 37 WDRYIVYYFAEAIKMLS--FGNAGIGIILFTLIIRIILMPLMHFQTKSMRKTQELQPKLK 94 Query: 398 ELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++++ + K +LY +N+NP AGC P+L+Q+P+ A+++ IS ++ Sbjct: 95 ALQQQYASKDSETQNKLRAETQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPALQ 154 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F L DP I + L + ++ MS ++ Sbjct: 155 EGKFLWL--QLGDRDPYFILPILAALFTFASTYL----------------SSMSQIESNA 196 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MP++ + + +GL +YW SN +VQ ++ + R Sbjct: 197 SLKIMNFAMPLMILLMGINIASGLSLYWVVSNAFQVVQTLILNNPFKIRQEREEAARKER 256 Query: 575 SKN 577 + Sbjct: 257 ERE 259 >gi|315654393|ref|ZP_07907301.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315491428|gb|EFU81045.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] Length = 441 Score = 173 bits (438), Expect = 8e-41, Method: Composition-based stats. Identities = 65/273 (23%), Positives = 112/273 (41%), Gaps = 28/273 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW M L + +AI+ T+ V+L+ PL KQ ++ M QP++ Sbjct: 29 GWILRGVHEMITLFGVESGAGIGWVLAIVGMTIVVRLIIVPLFIKQIKASRAMSLAQPEL 88 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 + +K+K Q Q+ M + K + + A C P+L+Q+PV FA+Y+++ Sbjct: 89 TAITKKYKGKRDQQTMMRQQEEMKAVQKKYGASMSASCLPLLVQMPVLFALYRLLYYMSA 148 Query: 453 MRHAPF--------WGWIKDLAAADPTNIFTLFGILPF----YLPGFMHVGIWPIIMSLS 500 + H G + A D T G F L + +GI + ++ Sbjct: 149 VAHGTMPEHDSIGGMGQQQAKALWDSTFFGESLGQTMFGPTSTLQTKIVIGIMVAFLVIT 208 Query: 501 MFIQ------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 MF+Q S P K ++ +MP+V++F GL+IYW SN Sbjct: 209 MFVQTAFLSMKNMSDEQLNSDNPMVKSTKSMMYFMPLVYLFTGPVVQVGLLIYWVTSNTW 268 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 S+VQQ +++ + R R+ + + Sbjct: 269 SLVQQYFMIRAYPTRGSAAARWRADAHEQKFEK 301 >gi|310659886|ref|YP_003937607.1| sec-independent factor for membrane protein insertion [Clostridium sticklandii DSM 519] gi|308826664|emb|CBH22702.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Clostridium sticklandii] Length = 228 Score = 173 bits (438), Expect = 8e-41, Method: Composition-based stats. Identities = 69/227 (30%), Positives = 119/227 (52%), Gaps = 6/227 (2%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 ++ L+ YN++G++ I+I++ TV VKLL PL Q S +M+ IQPK+DE+++ Sbjct: 4 LSYLFGSLLELIYNVIGDYAISIIVFTVVVKLLLLPLTLTQTKSMKSMQLIQPKMDEIKK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K++ P + QK +++LYK H +NPLAGC P+L+Q P+ ++ + ++ + Sbjct: 64 KYQNDPDKQNQK-IMELYKEHKVNPLAGCLPLLIQFPIIIGLFNALREPVKYVFGTEAAY 122 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAM 518 N ++ + PI+ +++ +IQ M P D Q M Sbjct: 123 KIADTGFLWVNNLASPDVILLGGISIPFI--LPILAAITTYIQSAMMSPKGGKKDPTQTM 180 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 +L P++ +F SFPAGL++YW N+ IVQQ ++ K A+ Sbjct: 181 MLYMFPIMMLFWGISFPAGLLLYWVAGNIFQIVQQYILSKPSKAKEA 227 >gi|227893841|ref|ZP_04011646.1| stage III sporulation protein J [Lactobacillus ultunensis DSM 16047] gi|227864330|gb|EEJ71751.1| stage III sporulation protein J [Lactobacillus ultunensis DSM 16047] Length = 291 Score = 172 bits (437), Expect = 1e-40, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 29/240 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I M + + NL+ N +G AI++ T+ V+++ PL ST M++IQP+I Sbjct: 56 WDRWIVYYMSAFILWLANLMNNSYGWAIIVFTIIVRVILLPLNAISIRSTTKMQSIQPQI 115 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +ELR+K+ + +LQ+ +LYK +NP GC P+L+Q+PV +A+Y I + ++ Sbjct: 116 NELRKKYPGRDTESRTLLQRETNKLYKEAGVNPYTGCLPVLVQLPVMYALYGAILRTPQL 175 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F DL+ DP I PI+ F+ +P + Sbjct: 176 QTGRFLWM--DLSKPDPYFI-------------------MPILAMAFTFLS---TPASSQ 211 Query: 514 KGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G I+ M ++ F + + +YW SN+ VQ ++ + + + Sbjct: 212 NGMTKIMTYGMSIMVGVMALQFQSAITLYWVISNMFQAVQTFILQNPIKYKKEQEAKAEA 271 >gi|256851671|ref|ZP_05557059.1| stage III sporulation protein J [Lactobacillus jensenii 27-2-CHN] gi|260661612|ref|ZP_05862524.1| stage III sporulation protein J [Lactobacillus jensenii 115-3-CHN] gi|297205280|ref|ZP_06922676.1| stage III sporulation protein J [Lactobacillus jensenii JV-V16] gi|256615629|gb|EEU20818.1| stage III sporulation protein J [Lactobacillus jensenii 27-2-CHN] gi|260547669|gb|EEX23647.1| stage III sporulation protein J [Lactobacillus jensenii 115-3-CHN] gi|297149858|gb|EFH30155.1| stage III sporulation protein J [Lactobacillus jensenii JV-V16] Length = 290 Score = 172 bits (437), Expect = 1e-40, Method: Composition-based stats. Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 22/248 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + +L+G N+G I++ T+ V+LL FPL ST + +QP+I Sbjct: 49 WDRYVIYYFSQFLLWLADLLGKNYGWTIIVFTILVRLLLFPLNAISIKSTTKQQQLQPEI 108 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 D+LR K+ + Q+L +LYK INP GC+P+LLQ+P FA+Y+ I + ++ Sbjct: 109 DKLRAKYPGNDAESRQLLNAETQKLYKEAGINPYLGCFPMLLQLPFMFALYQAIYSTKQL 168 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F +L+ ADP + + + ++ ++ QM + Sbjct: 169 QDGTFLWM--NLSKADPYYVMPILAAVFTFMSSYV--------------AQMSAPESSSQ 212 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK--MHGAEIGLIDRLR 571 ++ P++ SFP + +YW S++ S+VQ ++ + E + Sbjct: 213 SMTKAMMWITPLIVAVPAISFPTAITLYWVVSSIFSVVQTFILQNPFKYAREQEAKKQAE 272 Query: 572 STFSKNYN 579 + Sbjct: 273 KERQRKIR 280 >gi|312903103|ref|ZP_07762284.1| putative stage III sporulation protein J [Enterococcus faecalis TX0635] gi|310633494|gb|EFQ16777.1| putative stage III sporulation protein J [Enterococcus faecalis TX0635] gi|315163327|gb|EFU07344.1| putative stage III sporulation protein J [Enterococcus faecalis TX0645] gi|315578835|gb|EFU91026.1| putative stage III sporulation protein J [Enterococcus faecalis TX0630] Length = 266 Score = 172 bits (437), Expect = 1e-40, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + + +L G+ GI I+L T+ ++++ PL Q S + +QP++ Sbjct: 27 WDRYIVYYFAQAIKFL-SLGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQLK 85 Query: 398 ELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++K+ P+ + + +LY +N+NP GC P+L+Q+P+ A+Y+ IS E++ Sbjct: 86 ALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPELK 145 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F D DP I + + + ++ MS + Sbjct: 146 EGTFLWLSLD--KPDPYLILPILAAVFTFASTYL----------------SSMSQLETNA 187 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MP + F S + L +YW SN VQ ++ + R Sbjct: 188 SLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTVQTLLLNNPFKIRKEREEAARQAK 247 Query: 575 SKN 577 ++ Sbjct: 248 ARE 250 >gi|227518112|ref|ZP_03948161.1| stage III sporulation protein J precursor [Enterococcus faecalis TX0104] gi|229547133|ref|ZP_04435858.1| stage III sporulation protein J precursor [Enterococcus faecalis TX1322] gi|229550703|ref|ZP_04439428.1| stage III sporulation protein J precursor [Enterococcus faecalis ATCC 29200] gi|293382666|ref|ZP_06628594.1| stage III sporulation protein J [Enterococcus faecalis R712] gi|293387922|ref|ZP_06632458.1| stage III sporulation protein J [Enterococcus faecalis S613] gi|307268912|ref|ZP_07550276.1| putative stage III sporulation protein J [Enterococcus faecalis TX4248] gi|307274008|ref|ZP_07555218.1| putative stage III sporulation protein J [Enterococcus faecalis TX0855] gi|307276503|ref|ZP_07557623.1| putative stage III sporulation protein J [Enterococcus faecalis TX2134] gi|307284055|ref|ZP_07564225.1| putative stage III sporulation protein J [Enterococcus faecalis TX0860] gi|307287186|ref|ZP_07567257.1| putative stage III sporulation protein J [Enterococcus faecalis TX0109] gi|307296586|ref|ZP_07576406.1| putative stage III sporulation protein J [Enterococcus faecalis TX0411] gi|312901300|ref|ZP_07760583.1| putative stage III sporulation protein J [Enterococcus faecalis TX0470] gi|312908818|ref|ZP_07767757.1| putative stage III sporulation protein J [Enterococcus faecalis DAPTO 512] gi|312951724|ref|ZP_07770618.1| putative stage III sporulation protein J [Enterococcus faecalis TX0102] gi|312979540|ref|ZP_07791222.1| putative stage III sporulation protein J [Enterococcus faecalis DAPTO 516] gi|227074446|gb|EEI12409.1| stage III sporulation protein J precursor [Enterococcus faecalis TX0104] gi|229304136|gb|EEN70132.1| stage III sporulation protein J precursor [Enterococcus faecalis ATCC 29200] gi|229307715|gb|EEN73702.1| stage III sporulation protein J precursor [Enterococcus faecalis TX1322] gi|291079972|gb|EFE17336.1| stage III sporulation protein J [Enterococcus faecalis R712] gi|291082659|gb|EFE19622.1| stage III sporulation protein J [Enterococcus faecalis S613] gi|306495922|gb|EFM65510.1| putative stage III sporulation protein J [Enterococcus faecalis TX0411] gi|306501784|gb|EFM71075.1| putative stage III sporulation protein J [Enterococcus faecalis TX0109] gi|306503426|gb|EFM72675.1| putative stage III sporulation protein J [Enterococcus faecalis TX0860] gi|306506830|gb|EFM75980.1| putative stage III sporulation protein J [Enterococcus faecalis TX2134] gi|306509316|gb|EFM78376.1| putative stage III sporulation protein J [Enterococcus faecalis TX0855] gi|306514720|gb|EFM83271.1| putative stage III sporulation protein J [Enterococcus faecalis TX4248] gi|310625256|gb|EFQ08539.1| putative stage III sporulation protein J [Enterococcus faecalis DAPTO 512] gi|310630297|gb|EFQ13580.1| putative stage III sporulation protein J [Enterococcus faecalis TX0102] gi|311287722|gb|EFQ66278.1| putative stage III sporulation protein J [Enterococcus faecalis DAPTO 516] gi|311291677|gb|EFQ70233.1| putative stage III sporulation protein J [Enterococcus faecalis TX0470] gi|315030126|gb|EFT42058.1| putative stage III sporulation protein J [Enterococcus faecalis TX4000] gi|315033561|gb|EFT45493.1| putative stage III sporulation protein J [Enterococcus faecalis TX0017] gi|315036384|gb|EFT48316.1| putative stage III sporulation protein J [Enterococcus faecalis TX0027] gi|315143599|gb|EFT87615.1| putative stage III sporulation protein J [Enterococcus faecalis TX2141] gi|315148263|gb|EFT92279.1| putative stage III sporulation protein J [Enterococcus faecalis TX4244] gi|315151287|gb|EFT95303.1| putative stage III sporulation protein J [Enterococcus faecalis TX0012] gi|315153713|gb|EFT97729.1| putative stage III sporulation protein J [Enterococcus faecalis TX0031] gi|315155127|gb|EFT99143.1| putative stage III sporulation protein J [Enterococcus faecalis TX0043] gi|315158743|gb|EFU02760.1| putative stage III sporulation protein J [Enterococcus faecalis TX0312] gi|315165732|gb|EFU09749.1| putative stage III sporulation protein J [Enterococcus faecalis TX1302] gi|315168216|gb|EFU12233.1| putative stage III sporulation protein J [Enterococcus faecalis TX1341] gi|315170517|gb|EFU14534.1| putative stage III sporulation protein J [Enterococcus faecalis TX1342] gi|315174186|gb|EFU18203.1| putative stage III sporulation protein J [Enterococcus faecalis TX1346] gi|315573995|gb|EFU86186.1| putative stage III sporulation protein J [Enterococcus faecalis TX0309B] gi|315581946|gb|EFU94137.1| putative stage III sporulation protein J [Enterococcus faecalis TX0309A] gi|329576312|gb|EGG57827.1| putative stage III sporulation protein J [Enterococcus faecalis TX1467] Length = 266 Score = 172 bits (437), Expect = 1e-40, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 100/243 (41%), Gaps = 22/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + + +L G+ GI I+L T+ ++++ PL Q S + +QP++ Sbjct: 27 WDRYIVYYFAQAIKFL-SLGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQLK 85 Query: 398 ELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++K+ P+ ++ +LY +N+NP GC P+L+Q+P+ A+Y+ IS E++ Sbjct: 86 ALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPELK 145 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F D DP I + + + ++ MS + Sbjct: 146 EGTFLWLSLD--KPDPYLILPILAAVFTFASTYL----------------SSMSQLETNA 187 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MP + F S + L +YW SN Q ++ + R Sbjct: 188 SLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTGQTLLLNNPFKIRKEREEAARQAK 247 Query: 575 SKN 577 ++ Sbjct: 248 ARE 250 >gi|282934245|ref|ZP_06339522.1| stage III sporulation protein J [Lactobacillus jensenii 208-1] gi|281301719|gb|EFA93986.1| stage III sporulation protein J [Lactobacillus jensenii 208-1] Length = 285 Score = 172 bits (437), Expect = 1e-40, Method: Composition-based stats. Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 22/248 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + +L+G N+G I++ T+ V+LL FPL ST + +QP+I Sbjct: 44 WDRYVIYYFSQFLLWLADLLGKNYGWTIIVFTILVRLLLFPLNAISIKSTTKQQQLQPEI 103 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 D+LR K+ + Q+L +LYK INP GC+P+LLQ+P FA+Y+ I + ++ Sbjct: 104 DKLRAKYPGNDAESRQLLNAETQKLYKEAGINPYLGCFPMLLQLPFMFALYQAIYSTKQL 163 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F +L+ ADP + + + ++ ++ QM + Sbjct: 164 QDGTFLWM--NLSKADPYYVMPILAAVFTFMSSYV--------------AQMSAPESSSQ 207 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK--MHGAEIGLIDRLR 571 ++ P++ SFP + +YW S++ S+VQ ++ + E + Sbjct: 208 SMTKAMMWITPLIVAVPAISFPTAITLYWVVSSIFSVVQTFILQNPFKYAREQEAKKQAE 267 Query: 572 STFSKNYN 579 + Sbjct: 268 KERQRKIR 275 >gi|257875890|ref|ZP_05655543.1| inner membrane protein [Enterococcus casseliflavus EC20] gi|257810056|gb|EEV38876.1| inner membrane protein [Enterococcus casseliflavus EC20] Length = 274 Score = 172 bits (437), Expect = 1e-40, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 23/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + GN GI I+L T+ ++++ PL Q S + +QPK+ Sbjct: 37 WDRYIVYYFAEAIKALS--FGNAGIGIILFTLIIRVILMPLMHFQTKSMRKTQELQPKLK 94 Query: 398 ELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++++ + L++ +LY +N+NP AGC P+L+Q+P+ A+++ IS ++ Sbjct: 95 ALQQQYASKDTETQSKLKEETQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPALQ 154 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F L DP I + L + ++ MS ++ Sbjct: 155 EGKFLWL--QLGDRDPYFILPILAALFTFASTYL----------------SSMSQVESNA 196 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MP++ + + +GL +YW SN +VQ ++ + R Sbjct: 197 SLKIMNFAMPMMILLMGINIASGLSLYWVVSNAFQVVQTMILNNPFKIRQEREEAARKER 256 Query: 575 SKN 577 + Sbjct: 257 ERE 259 >gi|257866272|ref|ZP_05645925.1| inner membrane protein [Enterococcus casseliflavus EC30] gi|257873212|ref|ZP_05652865.1| inner membrane protein [Enterococcus casseliflavus EC10] gi|257800230|gb|EEV29258.1| inner membrane protein [Enterococcus casseliflavus EC30] gi|257807376|gb|EEV36198.1| inner membrane protein [Enterococcus casseliflavus EC10] Length = 274 Score = 172 bits (437), Expect = 1e-40, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 23/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + GN GI I+L T+ ++++ PL Q S + +QPK+ Sbjct: 37 WDRYIVYYFAEAIKALS--FGNAGIGIILFTLIIRVILMPLMHFQTKSMRKTQELQPKLK 94 Query: 398 ELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++++ + L++ +LY +N+NP AGC P+L+Q+P+ A+++ IS ++ Sbjct: 95 ALQQQYASKDTETQSKLKEETQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPALQ 154 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F L DP I + L + ++ MS ++ Sbjct: 155 EGKFLWL--QLGDRDPYFILPILAALFTFASTYL----------------SSMSQVESNA 196 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MP++ + + +GL +YW SN +VQ ++ + R Sbjct: 197 SLKIMNFAMPMMILLMGINIASGLSLYWVVSNAFQVVQTMILNNPFKIRQEREEAARKER 256 Query: 575 SKN 577 + Sbjct: 257 ERE 259 >gi|315026681|gb|EFT38613.1| putative stage III sporulation protein J [Enterococcus faecalis TX2137] Length = 266 Score = 172 bits (437), Expect = 1e-40, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 100/243 (41%), Gaps = 22/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + + +L G+ GI I+L T+ ++++ PL Q S + +QP++ Sbjct: 27 WDRYIVYYFAQAIKFL-SLGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQLK 85 Query: 398 ELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++K+ P+ ++ +LY +N+NP GC P+L+Q+P+ A+Y+ IS E++ Sbjct: 86 ALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPELK 145 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F D DP I + + + ++ MS + Sbjct: 146 EGTFMWLSLD--KPDPYLILPILAAVFTFASTYL----------------SSMSQLETNA 187 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MP + F S + L +YW SN Q ++ + R Sbjct: 188 SLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTGQTLLLNNPFKIRKEREEAARQAK 247 Query: 575 SKN 577 ++ Sbjct: 248 ARE 250 >gi|148545141|ref|YP_001272511.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM 20016] gi|194467400|ref|ZP_03073387.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri 100-23] gi|227364304|ref|ZP_03848397.1| stage III sporulation protein J precursor [Lactobacillus reuteri MM2-3] gi|325683503|ref|ZP_08163019.1| stage III sporulation protein J [Lactobacillus reuteri MM4-1A] gi|148532175|gb|ABQ84174.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM 20016] gi|194454436|gb|EDX43333.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri 100-23] gi|227070617|gb|EEI08947.1| stage III sporulation protein J precursor [Lactobacillus reuteri MM2-3] gi|324977853|gb|EGC14804.1| stage III sporulation protein J [Lactobacillus reuteri MM4-1A] Length = 263 Score = 172 bits (437), Expect = 1e-40, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 104/247 (42%), Gaps = 21/247 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + G +G+ I++ T+ ++++ PL Q + + + P++ Sbjct: 23 WDHYIIYNCSQFIIWLSKHFGGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQLK 82 Query: 398 ELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++K+ Q +Q +LYK +NP A P+L+Q+PV +A+Y+ I + +R Sbjct: 83 AIQKKYSSRDRESMQKMQMETQKLYKEAGVNPWASMLPLLVQLPVMWALYQAIWRTSALR 142 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + F L DP I + L ++ ++ + S P + Sbjct: 143 NGTFLWL--QLGHPDPYYIMPILAALFTFISSWLSMA----------------SMPEKNS 184 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 + +MP++ F F + + +YW +N +VQ +I ++ R+ Sbjct: 185 MTTTMTWFMPIMVFFMALGFSSAITLYWVVTNAFQVVQTLIIQNPFKIRREREEKQRAEK 244 Query: 575 SKNYNSQ 581 +K + Sbjct: 245 AKRRKIE 251 >gi|29377772|ref|NP_816926.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Enterococcus faecalis V583] gi|227555681|ref|ZP_03985728.1| stage III sporulation protein J precursor [Enterococcus faecalis HH22] gi|255971546|ref|ZP_05422132.1| preprotein translocase subunit YidC [Enterococcus faecalis T1] gi|255974519|ref|ZP_05425105.1| preprotein translocase subunit YidC [Enterococcus faecalis T2] gi|256618530|ref|ZP_05475376.1| preprotein translocase subunit YidC [Enterococcus faecalis ATCC 4200] gi|256761851|ref|ZP_05502431.1| preprotein translocase subunit YidC [Enterococcus faecalis T3] gi|256854978|ref|ZP_05560339.1| pheromone cCF10 percursor/lipoprotein [Enterococcus faecalis T8] gi|256957018|ref|ZP_05561189.1| preprotein translocase subunit YidC [Enterococcus faecalis DS5] gi|256960828|ref|ZP_05564999.1| preprotein translocase subunit YidC [Enterococcus faecalis Merz96] gi|256963980|ref|ZP_05568151.1| preprotein translocase subunit YidC [Enterococcus faecalis HIP11704] gi|257078696|ref|ZP_05573057.1| preprotein translocase subunit YidC [Enterococcus faecalis JH1] gi|257081344|ref|ZP_05575705.1| preprotein translocase subunit YidC [Enterococcus faecalis E1Sol] gi|257084001|ref|ZP_05578362.1| preprotein translocase subunit YidC [Enterococcus faecalis Fly1] gi|257417422|ref|ZP_05594416.1| preprotein translocase subunit YidC [Enterococcus faecalis AR01/DG] gi|257418845|ref|ZP_05595839.1| preprotein translocase subunit yidC [Enterococcus faecalis T11] gi|257421340|ref|ZP_05598330.1| pheromone lipoprotein [Enterococcus faecalis X98] gi|294781245|ref|ZP_06746592.1| putative stage III sporulation protein J [Enterococcus faecalis PC1.1] gi|300861757|ref|ZP_07107837.1| putative stage III sporulation protein J [Enterococcus faecalis TUSoD Ef11] gi|38502948|sp|Q82YV1|OXAA_ENTFA RecName: Full=Membrane protein oxaA; Flags: Precursor gi|29345240|gb|AAO82996.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Enterococcus faecalis V583] gi|227175191|gb|EEI56163.1| stage III sporulation protein J precursor [Enterococcus faecalis HH22] gi|255962564|gb|EET95040.1| preprotein translocase subunit YidC [Enterococcus faecalis T1] gi|255967391|gb|EET98013.1| preprotein translocase subunit YidC [Enterococcus faecalis T2] gi|256598057|gb|EEU17233.1| preprotein translocase subunit YidC [Enterococcus faecalis ATCC 4200] gi|256683102|gb|EEU22797.1| preprotein translocase subunit YidC [Enterococcus faecalis T3] gi|256709491|gb|EEU24538.1| pheromone cCF10 percursor/lipoprotein [Enterococcus faecalis T8] gi|256947514|gb|EEU64146.1| preprotein translocase subunit YidC [Enterococcus faecalis DS5] gi|256951324|gb|EEU67956.1| preprotein translocase subunit YidC [Enterococcus faecalis Merz96] gi|256954476|gb|EEU71108.1| preprotein translocase subunit YidC [Enterococcus faecalis HIP11704] gi|256986726|gb|EEU74028.1| preprotein translocase subunit YidC [Enterococcus faecalis JH1] gi|256989374|gb|EEU76676.1| preprotein translocase subunit YidC [Enterococcus faecalis E1Sol] gi|256992031|gb|EEU79333.1| preprotein translocase subunit YidC [Enterococcus faecalis Fly1] gi|257159250|gb|EEU89210.1| preprotein translocase subunit YidC [Enterococcus faecalis ARO1/DG] gi|257160673|gb|EEU90633.1| preprotein translocase subunit yidC [Enterococcus faecalis T11] gi|257163164|gb|EEU93124.1| pheromone lipoprotein [Enterococcus faecalis X98] gi|294451708|gb|EFG20163.1| putative stage III sporulation protein J [Enterococcus faecalis PC1.1] gi|300848282|gb|EFK76039.1| putative stage III sporulation protein J [Enterococcus faecalis TUSoD Ef11] gi|323479237|gb|ADX78676.1| inner membrane protein [Enterococcus faecalis 62] gi|327536429|gb|AEA95263.1| stage III sporulation protein J [Enterococcus faecalis OG1RF] Length = 275 Score = 172 bits (437), Expect = 1e-40, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 100/243 (41%), Gaps = 22/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + + +L G+ GI I+L T+ ++++ PL Q S + +QP++ Sbjct: 36 WDRYIVYYFAQAIKFL-SLGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQLK 94 Query: 398 ELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++K+ P+ ++ +LY +N+NP GC P+L+Q+P+ A+Y+ IS E++ Sbjct: 95 ALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPELK 154 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F D DP I + + + ++ MS + Sbjct: 155 EGTFLWLSLD--KPDPYLILPILAAVFTFASTYL----------------SSMSQLETNA 196 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MP + F S + L +YW SN Q ++ + R Sbjct: 197 SLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTGQTLLLNNPFKIRKEREEAARQAK 256 Query: 575 SKN 577 ++ Sbjct: 257 ARE 259 >gi|257088483|ref|ZP_05582844.1| preprotein translocase yidC [Enterococcus faecalis CH188] gi|256997295|gb|EEU83815.1| preprotein translocase yidC [Enterococcus faecalis CH188] Length = 275 Score = 172 bits (437), Expect = 1e-40, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + + +L G+ GI I+L T+ ++++ PL Q S + +QP++ Sbjct: 36 WDRYIVYYFAQAIKFL-SLGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQLK 94 Query: 398 ELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++K+ P+ + + +LY +N+NP GC P+L+Q+P+ A+Y+ IS E++ Sbjct: 95 ALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPELK 154 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F D DP I + + + ++ MS + Sbjct: 155 EGTFLWLSLD--KPDPYLILPILAAVFTFASTYL----------------SSMSQLETNA 196 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MP + F S + L +YW SN VQ ++ + R Sbjct: 197 SLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTVQTLLLNNPFKIRKEREEAARQAK 256 Query: 575 SKN 577 ++ Sbjct: 257 ARE 259 >gi|227543716|ref|ZP_03973765.1| stage III sporulation protein J precursor [Lactobacillus reuteri CF48-3A] gi|300908781|ref|ZP_07126244.1| stage III sporulation protein J [Lactobacillus reuteri SD2112] gi|227186284|gb|EEI66355.1| stage III sporulation protein J precursor [Lactobacillus reuteri CF48-3A] gi|300894188|gb|EFK87546.1| stage III sporulation protein J [Lactobacillus reuteri SD2112] Length = 277 Score = 172 bits (437), Expect = 1e-40, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 104/247 (42%), Gaps = 21/247 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + G +G+ I++ T+ ++++ PL Q + + + P++ Sbjct: 37 WDHYIIYNCSQFIIWLSKHFGGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQLK 96 Query: 398 ELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++K+ Q +Q +LYK +NP A P+L+Q+PV +A+Y+ I + +R Sbjct: 97 AIQKKYSSRDRESMQKMQMETQKLYKEAGVNPWASMLPLLVQLPVMWALYQAIWRTSALR 156 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + F L DP I + L ++ ++ + S P + Sbjct: 157 NGTFLWL--QLGHPDPYYIMPILAALFTFISSWLSMA----------------SMPEKNS 198 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 + +MP++ F F + + +YW +N +VQ +I ++ R+ Sbjct: 199 MTTTMTWFMPIMVFFMALGFSSAITLYWVVTNAFQVVQTLIIQNPFKIRREREEKQRAEK 258 Query: 575 SKNYNSQ 581 +K + Sbjct: 259 AKRRKIE 265 >gi|23465227|ref|NP_695830.1| hypothetical protein BL0644 [Bifidobacterium longum NCC2705] gi|189440301|ref|YP_001955382.1| preprotein translocase subunit [Bifidobacterium longum DJO10A] gi|239622847|ref|ZP_04665878.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|317482355|ref|ZP_07941375.1| YidC/Oxa1 family membrane protein insertase [Bifidobacterium sp. 12_1_47BFAA] gi|38503029|sp|Q8G6J6|OXAA_BIFLO RecName: Full=Membrane protein oxaA gi|23325856|gb|AAN24466.1| conserved hypothetical transmembrane protein in the 60 kDa inner membrane protein family [Bifidobacterium longum NCC2705] gi|189428736|gb|ACD98884.1| Preprotein translocase subunit [Bifidobacterium longum DJO10A] gi|239514844|gb|EEQ54711.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|316916235|gb|EFV37637.1| YidC/Oxa1 family membrane protein insertase [Bifidobacterium sp. 12_1_47BFAA] Length = 335 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 111/255 (43%), Gaps = 35/255 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-------------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WG+ Y I P+ L ++ +V ++ +AI++ + V+ FPL KQ Sbjct: 13 WGFLYKILTPVEWLQTWIMKIVHDFFVMLGVSPIGVSWVLAIIILVLVVQACIFPLFYKQ 72 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIP 438 S M+ + PK+ ++ K+K Q + + ++LY+ +++NP C P+L+Q P Sbjct: 73 MKSMRKMQALAPKMQRIQNKYKGKTDQASREAMSRETMKLYQDNDVNPAGSCLPMLIQGP 132 Query: 439 VFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFY-------LPGFMHV 490 VF +++ +S + + D+A A +FGI+ G + Sbjct: 133 VFMSMFYTLSAIPYIANGKRDALGAFDVATAKQFTQTDVFGIVSVTDNFTSAAASGKAVI 192 Query: 491 GIWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLII 540 GI+ +M ++ S + Q +L PV+++F+ + P +++ Sbjct: 193 GIFVFLMCFCLWFMQYFSMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGVAMPFAVLV 252 Query: 541 YWSWSNVISIVQQAV 555 YW +NV ++ + Sbjct: 253 YWLTNNVCNLCRTLW 267 >gi|238855503|ref|ZP_04645808.1| membrane protein OxaA 1 [Lactobacillus jensenii 269-3] gi|260665207|ref|ZP_05866056.1| stage III sporulation protein J [Lactobacillus jensenii SJ-7A-US] gi|282931529|ref|ZP_06337028.1| stage III sporulation protein J [Lactobacillus jensenii 208-1] gi|313472762|ref|ZP_07813250.1| stage III sporulation protein J [Lactobacillus jensenii 1153] gi|238831869|gb|EEQ24201.1| membrane protein OxaA 1 [Lactobacillus jensenii 269-3] gi|260560944|gb|EEX26919.1| stage III sporulation protein J [Lactobacillus jensenii SJ-7A-US] gi|281304336|gb|EFA96439.1| stage III sporulation protein J [Lactobacillus jensenii 208-1] gi|313448863|gb|EEQ68258.2| stage III sporulation protein J [Lactobacillus jensenii 1153] Length = 285 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 22/248 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + +L+G N+G I++ T+ V+LL FPL ST + +QP+I Sbjct: 44 WDRYVIFYFSQFLLWLADLLGKNYGWTIIVFTILVRLLLFPLNAISIKSTTKQQQLQPEI 103 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 D+LR K+ + Q+L +LYK INP GC+P+LLQ+P FA+Y+ I + ++ Sbjct: 104 DKLRAKYPGNDAESRQLLNAETQKLYKEAGINPYLGCFPMLLQLPFMFALYQAIYSTKQL 163 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F +L+ ADP + + + ++ ++ QM + Sbjct: 164 QDGTFLWM--NLSKADPYYVMPILAAVFTFMSSYV--------------AQMSAPESSSQ 207 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK--MHGAEIGLIDRLR 571 ++ P++ SFP + +YW S++ S++Q ++ + E + Sbjct: 208 SMTKAMMWITPLIVAVPAISFPTAITLYWVVSSIFSVIQTFILQNPFKYAREQEAKKQAE 267 Query: 572 STFSKNYN 579 + Sbjct: 268 KERQRKIR 275 >gi|184154473|ref|YP_001842814.1| cell division protein [Lactobacillus reuteri JCM 1112] gi|183225817|dbj|BAG26334.1| cell division protein [Lactobacillus reuteri JCM 1112] Length = 277 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 104/247 (42%), Gaps = 21/247 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + G +G+ I++ T+ ++++ PL Q + + + P++ Sbjct: 37 WDHYIIYNCSQFIIWLSKHFGGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQLK 96 Query: 398 ELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++K+ Q +Q +LYK +NP A P+L+Q+PV +A+Y+ I + +R Sbjct: 97 AIQKKYSSRDRESMQKMQMETQKLYKEAGVNPWASMLPLLVQLPVMWALYQAIWRTSALR 156 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + F L DP I + L ++ ++ + S P + Sbjct: 157 NGTFLWL--QLGHPDPYYIMPILAALFTFISSWLSMA----------------SMPEKNS 198 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 + +MP++ F F + + +YW +N +VQ +I ++ R+ Sbjct: 199 MTTTMTWFMPIMVFFMALGFSSAITLYWVVTNAFQVVQTLIIQNPFKIRREREEKQRAEK 258 Query: 575 SKNYNSQ 581 +K + Sbjct: 259 AKRRKIE 265 >gi|257087831|ref|ZP_05582192.1| preprotein translocase subunit YidC [Enterococcus faecalis D6] gi|256995861|gb|EEU83163.1| preprotein translocase subunit YidC [Enterococcus faecalis D6] Length = 275 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 100/243 (41%), Gaps = 22/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + + +L G+ GI I+L T+ ++++ PL Q S + +QP++ Sbjct: 36 WDRYIVYYFAQAIKFL-SLGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQLK 94 Query: 398 ELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++K+ P+ ++ +LY +N+NP GC P+L+Q+P+ A+Y+ IS E++ Sbjct: 95 ALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPELK 154 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F D DP I + + + ++ MS + Sbjct: 155 EGTFMWLSLD--KPDPYLILPILAAVFTFASTYL----------------SSMSQLETNA 196 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MP + F S + L +YW SN Q ++ + R Sbjct: 197 SLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTGQTLLLNNPFKIRKEREEAARQAK 256 Query: 575 SKN 577 ++ Sbjct: 257 ARE 259 >gi|218670937|ref|ZP_03520608.1| putative inner membrane protein translocase component YidC [Rhizobium etli GR56] Length = 139 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 79/134 (58%), Positives = 106/134 (79%) Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 YKVI I++EMRHAPF+GWI+DL+A DPT I LFG+LPF P +H+G+WP+IM ++MF+ Sbjct: 1 YKVIYITIEMRHAPFFGWIQDLSAPDPTTIVNLFGLLPFEAPALLHLGVWPLIMGVTMFV 60 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 QM+M+P P D QAMI NWMP+VF F L+SFPAGL+IYW+W+N +S++QQ+VIM+ HG Sbjct: 61 QMRMNPTPPDPTQAMIFNWMPLVFTFMLASFPAGLVIYWAWNNTLSVLQQSVIMRRHGVR 120 Query: 564 IGLIDRLRSTFSKN 577 I L D L+ F + Sbjct: 121 IELFDNLKGLFRRK 134 >gi|292669288|ref|ZP_06602714.1| stage III sporulation protein J [Selenomonas noxia ATCC 43541] gi|292649129|gb|EFF67101.1| stage III sporulation protein J [Selenomonas noxia ATCC 43541] Length = 224 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 65/230 (28%), Positives = 120/230 (52%), Gaps = 26/230 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F I + M++ FY++ ++G I+L T+ +KL+ +PL KQ S M+ IQ Sbjct: 9 FEPIIHILQMILGAFYSVTSAAGLESYGYPIILLTILIKLVTYPLTVKQVKSMKAMQEIQ 68 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS-LE 452 PK+ +++EK+K +P Q+LQ+ +L++ +NPLAGC P+L+Q+P+ +Y + Sbjct: 69 PKMKKIQEKYKNNP-QMLQQKTGELFRNAGVNPLAGCLPLLVQMPILMGMYYALFNFTFP 127 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 A + W+ +++ DP I P++ +L+ F+Q KM+ Sbjct: 128 SAAAAAFFWLPNMSEPDPLYIL-------------------PVLSALTTFLQQKMTSTEM 168 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + +++ MP+ + FP+GL++YW NV+ I+QQ + + G Sbjct: 169 NAQMKIMMTVMPLFIGWISLKFPSGLVLYWVTMNVVQIIQQWWMYRSEGP 218 >gi|229087531|ref|ZP_04219663.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-44] gi|228695778|gb|EEL48631.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-44] Length = 260 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 119/238 (50%), Gaps = 33/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ ++ + + V +FGIAI++ T+ V+ PLA QY S MK +QP+ Sbjct: 37 WDHYFVYPISFMIQFVAHHVPGASFGIAIIIITLIVRSAMIPLAISQYRSQMKMKKMQPE 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L+EK + QK M +L K NPLAGC P+L+Q+P+F A+Y IS + Sbjct: 97 LQKLKEKHGDVRKDIEKQKQYQKEMSELMKAGGWNPLAGCLPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSP 509 E+R + +L ADP +I PI+ +L+ FIQMK M Sbjct: 157 EEIRTSS--FLWVNLGHADPYHIL-------------------PILAALTTFIQMKIMQS 195 Query: 510 PPADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + Q +L MP + +F + P+GL++YW N+ ++ Q V+ K+ + Sbjct: 196 NTSAGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWVTGNLFTMTQMIVLRKVMERK 253 >gi|325567645|ref|ZP_08144312.1| stage III sporulation protein J [Enterococcus casseliflavus ATCC 12755] gi|325159078|gb|EGC71224.1| stage III sporulation protein J [Enterococcus casseliflavus ATCC 12755] Length = 274 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 101/243 (41%), Gaps = 23/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + GN GI I+L T+ ++++ PL Q S + +QPK+ Sbjct: 37 WDRYIVYYFAEAIKALS--FGNAGIGIILFTLIIRVILMPLMHFQTKSMRKTQELQPKLK 94 Query: 398 ELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++++ + L++ +LY +N+NP AGC P+L+Q+P+ A+++ IS ++ Sbjct: 95 ALQQQYASKDTETQSKLKEETQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPALQ 154 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F L DP I + L + ++ MS ++ Sbjct: 155 EGKFLWL--QLGDRDPYFILPILAALFTFASTYL----------------SSMSQVESNA 196 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MP++ + + +GL +YW SN ++Q ++ + R Sbjct: 197 SLKIMNFAMPMMILLMGINIASGLSLYWVVSNAFQVLQTMILNNPFKIRQEREEAARKER 256 Query: 575 SKN 577 + Sbjct: 257 ERE 259 >gi|320333667|ref|YP_004170378.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus maricopensis DSM 21211] gi|319754956|gb|ADV66713.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus maricopensis DSM 21211] Length = 493 Score = 172 bits (436), Expect = 2e-40, Method: Composition-based stats. Identities = 89/465 (19%), Positives = 173/465 (37%), Gaps = 67/465 (14%) Query: 123 ELDYVSTANNIE--LPNSNTVWNLISGKILTPTTPIKLV--FKNANNI-LFERTISLDEH 177 +++ V + + LP++ + ++ + F+ +TI L Sbjct: 88 QINLVGSGKAFDVALPDNTSKPTAEGVQVSQDNAKATMTARFQYTQGAATVTKTIVLHPR 147 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 FK+ +V D+ + G P G Q A + + Sbjct: 148 -QFKVDTSVNVTGADRYTVNFSGLGRNSDPVVRGANRGGQLTQGAATIENA--------- 197 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 +Y + + + H+ +G A + A L Sbjct: 198 -------------------QY--AALLDKPSQTAHAIIVRPQEGTAAIAMQGGAQSRLQL 236 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 ++ G E ++ L F I+ + M + Y+++ Sbjct: 237 -RLQGPARFEVYGGKNELIHLYQ----EGYTTLPDLFRPNIFGQISLLIVKFMEWLYSVL 291 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+ I++ TV ++ +PL + Q +TA M+ +QPK+ E++EK+K P Q +Q ++ Sbjct: 292 HNWGLVILVLTVVLRAAIWPLMQTQGKTTARMQLLQPKLKEVQEKYKDDP-QKMQAETMR 350 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 +Y+ +N+NP AGC + P+ A++ I GW+ DL+ DP I Sbjct: 351 MYREYNVNP-AGCLSSFIPFPILIALWSTIRNFEF---DSGLGWLPDLSIPDPLYILAAL 406 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 + + L +++ + SP + Q+ I ++F + +FPAG Sbjct: 407 ---------------YVAVNLLQLYVSTRKSPE-MFRQQSFIY----LIFAYFALTFPAG 446 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGL-IDRLRSTFSKNYNSQ 581 + +YW S VI +QQ I + A + + R+ K + Q Sbjct: 447 VTLYWIISTVIGTIQQVFINRHVAATMDAGLQRVERAPRKTVDVQ 491 >gi|288554603|ref|YP_003426538.1| OxaA-like protein precursor [Bacillus pseudofirmus OF4] gi|288545763|gb|ADC49646.1| OxaA-like protein precursor SpoIIIJ [Bacillus pseudofirmus OF4] Length = 255 Score = 172 bits (436), Expect = 2e-40, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 110/223 (49%), Gaps = 25/223 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W + P+ L+ YF + ++G++I++ T+ ++LL PL KQ S M+ IQP++ Sbjct: 36 WNSYFVYPLSWLIIYFGEALNSYGLSIIVVTILLRLLILPLMIKQTKSAKAMQAIQPEMQ 95 Query: 398 ELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +LREK+ Q Q LQ+ M+ +++ +NPLAGC P+ +Q+P+ A Y I + + Sbjct: 96 KLREKYSAKDQKTQQKLQQEMMAMFQERGVNPLAGCLPLFVQMPILLAFYHAIMRTDVIG 155 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + F + +L A DP + PI+ ++ FIQ KM + Sbjct: 156 NYSFLWF--ELGAPDPFVL--------------------PIVAGITTFIQQKMMMVTDNP 193 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++L MPV+ FPA L +YW N++ I Q I Sbjct: 194 QMKILLYVMPVMIFVFAMFFPAALTLYWVVGNLVMITQTYFIT 236 >gi|289705892|ref|ZP_06502271.1| membrane protein insertase, YidC/Oxa1 family [Micrococcus luteus SK58] gi|289557377|gb|EFD50689.1| membrane protein insertase, YidC/Oxa1 family [Micrococcus luteus SK58] Length = 332 Score = 172 bits (435), Expect = 2e-40, Method: Composition-based stats. Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 45/273 (16%) Query: 339 FYFIAKPMFMLMSY----------FYNLVGNFGIAIMLTTVFV----KLLFFPLAKKQYV 384 F I P LMS+ F L + G L+ + + + L PL KQ Sbjct: 2 FEAILAPFRWLMSWLLGAFHSVLDFAGLPADSGWTWALSILLLVVLIRTLLIPLFVKQIK 61 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGCWPILLQIPVF 440 + M+ IQP++ +L+ K+K Q+ ++AM L K H NP A C P+L+Q+P F Sbjct: 62 AQRAMQAIQPELQKLQAKYKGKKDQLSRQAMAMEQQALMKEHKANPFAACLPLLVQMPFF 121 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF---TLFGI-----------LPFYLPG 486 FA+Y+V+ L R A G D +A+ F T+FG P P Sbjct: 122 FALYQVL---LGARGAAERGEAMDALSAEQIRSFEGSTIFGARMSDTFMNSLGAPGSTPV 178 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPA 536 + + ++MS SMF KM P + Q ++L MP++F +FP Sbjct: 179 IVTAIVLILLMSGSMFFMQKMLMTKNMTQQALTGPMMQTQQVMLYAMPLIFGIGGINFPI 238 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 G+++YW++SN ++ QQ I++ + L ++ Sbjct: 239 GVLLYWTYSNFWAVGQQWWIIRNNPTPGSLAEK 271 >gi|68160684|gb|AAY86788.1| lr0252 [Lactobacillus reuteri] Length = 277 Score = 172 bits (435), Expect = 2e-40, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 103/247 (41%), Gaps = 21/247 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + G +G+ I++ T+ ++++ PL Q + + + P++ Sbjct: 37 WDHYIIYNCSQFIIWLSKHFGGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQLK 96 Query: 398 ELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++K+ Q +Q +LYK +NP A P+L+Q+PV + +Y+ I + +R Sbjct: 97 AIQKKYSSRDRESMQKMQMETHKLYKEAGVNPWASMLPLLVQLPVMWGLYQAIWRTSALR 156 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + F L DP I + L ++ ++ + S P + Sbjct: 157 NGTFLWL--QLGHPDPYYIMPILAALFTFISSWLSMA----------------SMPEKNS 198 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 + +MP++ F F + + +YW +N +VQ +I ++ R+ Sbjct: 199 MTTTMTWFMPIMVFFMALGFSSAITLYWVVTNAFQVVQTLIIQNPFKIRREREEKQRAEK 258 Query: 575 SKNYNSQ 581 +K + Sbjct: 259 AKRRKIE 265 >gi|332296665|ref|YP_004438588.1| membrane protein insertase, YidC/Oxa1 family [Thermodesulfobium narugense DSM 14796] gi|332179768|gb|AEE15457.1| membrane protein insertase, YidC/Oxa1 family [Thermodesulfobium narugense DSM 14796] Length = 214 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 118/230 (51%), Gaps = 27/230 (11%) Query: 338 WFYFIAKPMFMLMSY-FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 +F + +F + Y + + +FG+ I+L T+ ++ L +PL M+ +QPKI Sbjct: 4 FFSWFDTNVFHPIFYSLLSFLHDFGLVIILITLLIRALLWPLNHISLDQMKKMQKLQPKI 63 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI------SIS 450 EL+EK+K P Q LQ M+ YK + INP GC P+L+Q+P+ A Y + SI Sbjct: 64 KELQEKYKSDP-QRLQTEMVAFYKNNKINPFGGCLPMLIQLPILIAFYYFLLSPELKSII 122 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + A + WI D+ DP I P ++ ++ +IQ K++ Sbjct: 123 EQTHSAVNFLWINDITEKDPFYIL-------------------PALLMITTYIQQKITTN 163 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 AD+ Q +L MP+ F FPAG++IYW+ SN+I I+Q ++M+ H Sbjct: 164 TADRMQRQMLLIMPLFLGFISIQFPAGILIYWNVSNIIGIIQSFIVMRKH 213 >gi|302798427|ref|XP_002980973.1| hypothetical protein SELMODRAFT_12954 [Selaginella moellendorffii] gi|300151027|gb|EFJ17674.1| hypothetical protein SELMODRAFT_12954 [Selaginella moellendorffii] Length = 313 Score = 171 bits (434), Expect = 3e-40, Method: Composition-based stats. Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 30/256 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WF + M ++ + + +G AI+L TV VK+L FPL K Q ST +M+N Sbjct: 37 WFSGVTTVMEAVLKVLKDGLTTLKVPYAYGFAIILLTVLVKVLTFPLTKSQAESTISMQN 96 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QPK+ +++++ + +Q +LYK +NPLAGC P L +PV+ +Y+ +S Sbjct: 97 LQPKLKAIQQRYAGD-QERIQMETARLYKQAGVNPLAGCLPTLATLPVWIGLYRALSNVA 155 Query: 452 -EMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPIIMSL 499 E + + WI LA + I LF G P + + P+++ Sbjct: 156 NEGLLSEGFFWIPSLAGPTTIAARQSGSGISWLFPFVDGHPPLGWGDTIAYLVLPVLLIG 215 Query: 500 SMFIQMK-MSPPPADKGQA---MILNWMPVVFVFALSSFPAGLIIYWS-----WSN--VI 548 S + M+ M PP D Q +IL ++P++ + S P+GL +YW +N ++ Sbjct: 216 SQYASMQIMQPPQTDPSQKNTQLILKFLPLMIGYFALSVPSGLSLYWLSTENRVANKHIL 275 Query: 549 SIVQQAVIMKMHGAEI 564 S QQ + K+ G + Sbjct: 276 STGQQVWLRKLGGRKP 291 >gi|326329125|ref|ZP_08195453.1| membrane protein OxaA [Nocardioidaceae bacterium Broad-1] gi|325953012|gb|EGD45024.1| membrane protein OxaA [Nocardioidaceae bacterium Broad-1] Length = 330 Score = 171 bits (434), Expect = 3e-40, Method: Composition-based stats. Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 31/270 (11%) Query: 339 FYFIAKPMFMLMS--------YFYNLVGN----FGIAIMLTTVFVKLLFFPLAKKQYVST 386 F +IA P++ +S F ++ + + +AI+ TV ++ L PL KQ S+ Sbjct: 8 FGWIATPLYYAISGILLVWQKAFAYVIPSEGWQWALAIVGLTVTIRALLIPLFVKQINSS 67 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 NM+ +QPK+ EL++K+ ++ ++LYK NP A C P+LLQ+P+FF ++++ Sbjct: 68 RNMQLLQPKVRELQKKYGHDREKLAN-ETMKLYKDSGTNPFASCLPLLLQMPIFFVLFRM 126 Query: 447 ISISLEMRH--------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 + + + A + L + T ++L GF+ V + Sbjct: 127 LEHASDGIGKGFLSDEAAHEFATSTWLGSLLSDQFTTADHTSTYFLTGFLVVAMIATTFL 186 Query: 499 LSMFIQMKMSPPPAD-----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + K P A + Q ++L +PVVF +FP G I+YW+ SN+ ++ QQ Sbjct: 187 TQRQLMSKNMPADAMTGQYAQQQKLLLYVLPVVFAVGGIAFPVGTILYWTSSNLWTMGQQ 246 Query: 554 AVIMKMHGAE-----IGLIDRLRSTFSKNY 578 +++ + A +R ++ K Sbjct: 247 FYVIRNNPAPGTPAFEAKQERDKAKRRKKG 276 >gi|194016614|ref|ZP_03055228.1| membrane protein OxaA 1 [Bacillus pumilus ATCC 7061] gi|194012087|gb|EDW21655.1| membrane protein OxaA 1 [Bacillus pumilus ATCC 7061] Length = 259 Score = 171 bits (434), Expect = 3e-40, Method: Composition-based stats. Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 31/247 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L++Y NL G N+G+AI++ T+ ++LL PL KQ ST M+ +QP++ Sbjct: 37 WNSYIVYPLSQLITYMANLTGENYGVAIIIVTLLIRLLILPLMIKQLRSTKAMQALQPEL 96 Query: 397 DELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ + Q+ + L++ + +NPLAGC+PIL+Q+P+ Y I + E+ Sbjct: 97 KKLREKYSSKDQKTQQQLQQETMALFQKNGVNPLAGCFPILIQMPILIGFYHAIMRTAEI 156 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 + F + DL + DP + PII ++ FIQ K+ P Sbjct: 157 KKHTFLWF--DLGSPDPLFLL-------------------PIIAGVATFIQQKLMMAGNP 195 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + A++L MP++ + SFPA L +YW N+ I+Q VI ++ L + Sbjct: 196 SDNPQMAIMLWVMPIMIIVFAISFPAALSLYWVVGNIFMIIQTLVIK---TPQVKLDTKE 252 Query: 571 RSTFSKN 577 ++ +K Sbjct: 253 KAGGNKK 259 >gi|269129164|ref|YP_003302534.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata DSM 43183] gi|268314122|gb|ACZ00497.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata DSM 43183] Length = 351 Score = 171 bits (433), Expect = 3e-40, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 112/250 (44%), Gaps = 31/250 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F ++ + + + + +G + +I+L TVF++LL FPL KQ ++ M Sbjct: 2 FDWLYEIVAWFIVLIHKGLGTIVDPDSGLAWAGSIILLTVFLRLLMFPLFVKQIHASRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + + P+I LR+K+K Q L + ++++Y+ + NPLAGC P+L+Q+PVF +++V++ Sbjct: 62 QELSPQIQALRKKYKHDK-QRLNQEVMRVYQENGANPLAGCLPLLVQMPVFIGLFQVLNG 120 Query: 450 SLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFYLPGFMHVGIWP------------- 494 + + I + +A +IF ++P G W Sbjct: 121 ISKAKEGESKYGISPELIHSAQHADIFG--AVIPDTFLNAWGDGAWDAVAVTAVAVLISS 178 Query: 495 ----IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 M SM Q M P ++ ++ + FP G+++YW SN ++ Sbjct: 179 TTTFFTMRASMKRQPVMDPDNPMVAAQKMMVFLAPLLGLFGLGFPLGVLLYWMTSNTWTL 238 Query: 551 VQQAVIMKMH 560 QQ I + Sbjct: 239 AQQHYIYSKY 248 >gi|160944271|ref|ZP_02091500.1| hypothetical protein FAEPRAM212_01780 [Faecalibacterium prausnitzii M21/2] gi|158444453|gb|EDP21457.1| hypothetical protein FAEPRAM212_01780 [Faecalibacterium prausnitzii M21/2] Length = 357 Score = 171 bits (433), Expect = 3e-40, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 111/296 (37%), Gaps = 59/296 (19%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +FY ++ P+ +M + Y L+ N+G I+L T+ + ++ PL Q S A M QP I Sbjct: 7 FFYILSGPLGYVMEWIYKLLPNYGWDIILFTLLINIVKIPLQTSQQKSMAKMSAFQPMIA 66 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE----- 452 E++ K+K P+ Q+ +++L + P AGC P+LL V + V+ LE Sbjct: 67 EIQTKYKN-KPEKQQEELMKLQQDFGYKPTAGCVPMLLNFLVMLGVIGVVYNPLERIFHI 125 Query: 453 -----------------------------------------------MRHAPFWGWIKDL 465 + +G + Sbjct: 126 SAAALASAGEAMTAAGISFTAITRDTNIIAEVLAGNSGVLGCFSVEQIATITEFGQHMNF 185 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 D T I L L LP + M LS I MK S + + MP+ Sbjct: 186 LGIDLTRIPKLGLSLDIVLPLLSVI-----TMFLSTHISMKASGQQMQGSMKLTMYMMPL 240 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +++F +FP +Y+ SN++ Q V+ K + E + + + + + Sbjct: 241 MYLFFCFTFPLAFSLYYVISNIVMTAQTQVMRKFYDPE-KMRKEVEAEIAAKRKQE 295 >gi|315640360|ref|ZP_07895476.1| stage III sporulation protein J [Enterococcus italicus DSM 15952] gi|315483896|gb|EFU74376.1| stage III sporulation protein J [Enterococcus italicus DSM 15952] Length = 280 Score = 171 bits (433), Expect = 3e-40, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 28/252 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + GN GI I+L T+ ++++ PL Q S +++QP++ Sbjct: 39 WDRYIVYYFAEAIKGLS--FGNAGIGIILFTIIIRVILLPLMHFQTKSMRKTQDLQPQLK 96 Query: 398 ELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +L+ ++ Q Q + +LY +N+NP GC P+L+Q+P+ A+++ IS + Sbjct: 97 KLQAQYSSRDTQTQQKLREETQKLYAENNVNPYIGCLPLLVQMPILMALWQAISRVPALT 156 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 L DP I + L + ++ MS ++ Sbjct: 157 EG--HFLWLQLGLKDPYYILPILAALFTFASTYL----------------SSMSQVESNA 198 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM-----KMHGAEIGLIDR 569 ++ MP++ +F + +GL +YW SN ++Q +I + E L+ + Sbjct: 199 SMKIMTFVMPLMILFMGVNLASGLSLYWVISNGFQVIQTLLINNPFVIRKEREEAALLAK 258 Query: 570 LRSTFSKNYNSQ 581 + K +Q Sbjct: 259 EKERALKKAKNQ 270 >gi|210624040|ref|ZP_03294157.1| hypothetical protein CLOHIR_02109 [Clostridium hiranonis DSM 13275] gi|210153247|gb|EEA84253.1| hypothetical protein CLOHIR_02109 [Clostridium hiranonis DSM 13275] Length = 235 Score = 171 bits (433), Expect = 3e-40, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 14/227 (6%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 I K ++ Y G++G+AI+L T VKLL PL KQ ST M+ I P+++E++ Sbjct: 4 LIGKLFGNILGAIYGFTGSYGVAIILFTFLVKLLLMPLTIKQTKSTVAMQEITPRVNEIQ 63 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K +P + K +++LY+ NINP+AGC P+L+Q P+ ++ ++ + + G Sbjct: 64 EKYKNNP-ERQNKEIMELYQRANINPMAGCLPLLIQFPILIGLFNLLKDPVGL------G 116 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPADKGQAMI 519 AA + N G + I I+ S FI K M+P GQ + Sbjct: 117 AFASQAAFNQAN-----GQFLWMQNLTNPDTILAILSGASAFIMQKIMTPKEQVNGQMKM 171 Query: 520 LNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + +M + + FPAGL +YW+ SN+ +I+QQ ++ K A+ Sbjct: 172 MTYMMAGLSFYWGFIFPAGLTLYWTISNIFAILQQVIVTKPLKAKFE 218 >gi|308179187|ref|YP_003918593.1| preprotein translocase subunit YidC [Arthrobacter arilaitensis Re117] gi|307746650|emb|CBT77622.1| putative preprotein translocase subunit YidC [Arthrobacter arilaitensis Re117] Length = 324 Score = 171 bits (433), Expect = 4e-40, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 108/257 (42%), Gaps = 36/257 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFG----------IAIMLTTVFVKLLFFPLAKKQYVSTA 387 + ++ F+ L G ++I+ + ++ L P+ KQ S Sbjct: 8 ILTPFTYVVSWVLWAFHELFTTIGMNADSGVTWTLSIIFLVLLIRTLLIPVFVKQIKSQR 67 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGCWPILLQIPVFFAI 443 M+ +QP + +L+ K+K Q+ ++AM L+K H NPL+ C P+L+Q+P FFA+ Sbjct: 68 AMQALQPDLRKLQAKYKGKTDQMSRQAMVQEQQALFKKHKTNPLSSCLPLLVQMPFFFAL 127 Query: 444 YKVISIS------------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 ++V++ + L H + L A + Sbjct: 128 FRVLNEASRASDDGRSIGALSAEHIRSFDQSSILGAPLSETFLGTINSGAVNWAVIIVAV 187 Query: 492 IWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 + + M+ S F + P + Q M+L +P+VF +FP G++IY Sbjct: 188 VMILAMTASQFFTQRQLMTKNMSAEALQGPFMQQQKMMLYILPLVFGIGGINFPIGVLIY 247 Query: 542 WSWSNVISIVQQAVIMK 558 W+ SN+ ++ QQ +++ Sbjct: 248 WTASNLWTLGQQFWVIR 264 >gi|306823999|ref|ZP_07457373.1| membrane protein OxaA [Bifidobacterium dentium ATCC 27679] gi|309801939|ref|ZP_07696053.1| membrane protein insertase, YidC/Oxa1 family [Bifidobacterium dentium JCVIHMP022] gi|304552997|gb|EFM40910.1| membrane protein OxaA [Bifidobacterium dentium ATCC 27679] gi|308221387|gb|EFO77685.1| membrane protein insertase, YidC/Oxa1 family [Bifidobacterium dentium JCVIHMP022] Length = 336 Score = 171 bits (433), Expect = 4e-40, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 113/255 (44%), Gaps = 35/255 (13%) Query: 336 WGWFYFIAKPMFMLMSY----FYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WGW Y + P+ LM+ F+ + ++ ++I+ + V FPL K Sbjct: 14 WGWLYKLLTPIEWLMTQIMAIFHKFLTLLGMHPVGFSWVLSIIFLVLVVHACVFPLYYKT 73 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIP 438 S M+ IQPK+ ++ K+K Q +Q+ M++LY+ ++ NP+ C P+L+Q P Sbjct: 74 MKSMRKMQEIQPKMARIQNKYKGKNDQASKEAMQREMMKLYQDNDANPMGSCLPMLIQGP 133 Query: 439 VFFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLF------GILPFYLPGFMHVG 491 +F ++ +S + R D A A T+F + + G + + Sbjct: 134 IFMCMFYTLSAIPYIARGKRAALGAFDQATALQFTKTTVFNTNVTDNFMTANIGGKVVIA 193 Query: 492 IWPIIMSLSMFIQMKMSP-----------PPADKGQAMILNWMPVVFVFALSSFPAGLII 540 I+ +M ++ + + Q M+L P++++F+ ++ P +++ Sbjct: 194 IFVALMCFCLWFMQYNNMKRNMPQNGPQTKQTEMMQKMMLWMFPIMYIFSGATMPFAVLV 253 Query: 541 YWSWSNVISIVQQAV 555 YW +N++++ + Sbjct: 254 YWLANNILNLCRSLW 268 >gi|171741737|ref|ZP_02917544.1| hypothetical protein BIFDEN_00828 [Bifidobacterium dentium ATCC 27678] gi|171277351|gb|EDT45012.1| hypothetical protein BIFDEN_00828 [Bifidobacterium dentium ATCC 27678] Length = 336 Score = 171 bits (433), Expect = 4e-40, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 113/255 (44%), Gaps = 35/255 (13%) Query: 336 WGWFYFIAKPMFMLMSY----FYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WGW Y + P+ LM+ F+ + ++ ++I+ + V FPL K Sbjct: 14 WGWLYKLLTPIEWLMTQIMAIFHKFLTLLGMHPVGFSWVLSIIFLVLVVHACVFPLYYKT 73 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIP 438 S M+ IQPK+ ++ K+K Q +Q+ M++LY+ ++ NP+ C P+L+Q P Sbjct: 74 MKSMRKMQEIQPKMARIQNKYKGKNDQASKEAMQREMMKLYQDNDANPMGSCLPMLIQGP 133 Query: 439 VFFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLF------GILPFYLPGFMHVG 491 +F ++ +S + R D A A T+F + + G + + Sbjct: 134 IFMCMFYTLSAIPYIARGKRAALGAFDQATALQFTKTTVFNTNVTDNFMTANIGGKVVIA 193 Query: 492 IWPIIMSLSMFIQMKMSP-----------PPADKGQAMILNWMPVVFVFALSSFPAGLII 540 I+ +M ++ + + Q M+L P++++F+ ++ P +++ Sbjct: 194 IFVALMCFCLWFMQYNNMKRNMPQNGPQTKQTEMMQKMMLWMFPIMYIFSGATMPFAVLV 253 Query: 541 YWSWSNVISIVQQAV 555 YW +N++++ + Sbjct: 254 YWLANNILNLCRSLW 268 >gi|323357960|ref|YP_004224356.1| preprotein translocase subunit YidC [Microbacterium testaceum StLB037] gi|323274331|dbj|BAJ74476.1| preprotein translocase subunit YidC [Microbacterium testaceum StLB037] Length = 358 Score = 170 bits (432), Expect = 4e-40, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 120/283 (42%), Gaps = 42/283 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG----------NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + + + +++ ++ L + ++I+ + V+ PL KQ S Sbjct: 9 ILWPLKWMVELVLVGWHALFTALGMAPAAGLTWVLSIVGLVLIVRAALIPLFVKQIKSQR 68 Query: 388 NMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 M I P++ +++EK+K Q + + + LYK H P++ C P+L+Q+P+FFA+ Sbjct: 69 KMMEIAPELRKVQEKYKGKRDQLSREAMSRETMALYKKHGTTPVSSCLPLLVQMPIFFAL 128 Query: 444 YKVIS---------------ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 + V++ ++ E+ + + D+A+ + P Sbjct: 129 FSVLNDVSKHAASGVGGVGLLTPELTTEFYDARLFDVASMHVNLVTAW--NQPDGQVTVA 186 Query: 489 HVGIWPIIMSLSMFIQM------KMSPP----PADKGQAMILNWMPVVFVFALSSFPAGL 538 + ++M S F +SP A + Q ++L +P+ F+F+ FP G+ Sbjct: 187 ILLTLVVLMIASQFFTQLQIISKNLSPEAKTGQAYQMQKVMLYILPLAFIFSGVFFPLGV 246 Query: 539 IIYWSWSNVISIVQQAVIMK-MHGAEIGLIDRLRSTFSKNYNS 580 +IYW SN+ ++VQQ V+++ M ++ + Sbjct: 247 VIYWFVSNLWTMVQQFVVIREMPTPGSDAAKAREERLARKGKA 289 >gi|227876537|ref|ZP_03994648.1| inner membrane protein translocase component YidC [Mobiluncus mulieris ATCC 35243] gi|227842851|gb|EEJ53049.1| inner membrane protein translocase component YidC [Mobiluncus mulieris ATCC 35243] Length = 445 Score = 170 bits (432), Expect = 4e-40, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 112/279 (40%), Gaps = 38/279 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG----------NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 Y + +M + L+ + ++I+ TVFV+LL PL KQ +T Sbjct: 20 ILYPFMWVIGWIMRGIHELLALAGVSSGAGVGWVLSIVGLTVFVRLLLVPLFVKQIKATR 79 Query: 388 NMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 M QP++ +++K+K Q +Q+ + + + + A C PIL Q+PVFFA+ Sbjct: 80 AMSLAQPEMSAIQKKYKGKRDQQSMIRMQEETRAVQRKYGASMSASCLPILFQMPVFFAL 139 Query: 444 YKVISISLEMR-----HAPFWGWIKDLAAAD--PTNIFTLFGILPFYLPG-----FMHVG 491 Y+++ + G + + A D + F L + PG + VG Sbjct: 140 YRLLYNMKPIADGVLPGHDSIGGMGQVQAQDLWHSTFFGQSLGLTMFGPGSVMSTKIVVG 199 Query: 492 IWPIIMSLSMFIQ------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 I + LSM Q S P K ++ MP++++F GL+ Sbjct: 200 IMVAYLVLSMLFQTAFLTMKNMSQEQLNSDNPMVKSTKSMMYLMPLMYLFTGPVVQVGLL 259 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 +YW SN I+QQ IM+ + R + Sbjct: 260 VYWVTSNTWMILQQFFIMRAFPTRGSAAAKWREAAHEKK 298 >gi|310288302|ref|YP_003939561.1| preprotein translocase subunit YidC [Bifidobacterium bifidum S17] gi|309252239|gb|ADO53987.1| preprotein translocase subunit YidC [Bifidobacterium bifidum S17] Length = 336 Score = 170 bits (432), Expect = 5e-40, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 117/281 (41%), Gaps = 37/281 (13%) Query: 336 WGWFYFIAKPMFMLMSY----FYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WGW Y + P+ LM+ F+ + ++ +AI+ + V P+ KQ Sbjct: 14 WGWLYKLLTPLEWLMTQVMVLFHKFLTLLGMAPIGISWVLAIVFLVLVVHACILPIYLKQ 73 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIP 438 S M+ +QPK+ ++ K+K Q + + M++LY+ ++ NP+ CW ++Q P Sbjct: 74 MKSMRKMQALQPKMQHIQNKYKGKKDQASKEAMSREMMKLYQDNDANPMGSCWTAVIQGP 133 Query: 439 VFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYL------PGFMHVG 491 VF ++ ++S + D A A+ +FG+ G + +G Sbjct: 134 VFMCMFYMLSAIPYIATGKRGALGAFDQATAEQFAQTRVFGVSVTDTFGTANNSGKVVIG 193 Query: 492 IWPIIMSLSMFIQM-----KMSPPPAD-----KGQAMILNWMPVVFVFALSSFPAGLIIY 541 + ++M M+ K P + K Q + P++++F+ FP +++Y Sbjct: 194 FFILLMCACMWYMQFNNMRKNLPKASMQGSTYKMQQAMTWGFPIMYIFSGIMFPFAVLVY 253 Query: 542 WSWSNVISIVQQAV-IMKM--HGAEIGLIDRLRSTFSKNYN 579 W +N ++ + + K G+ +R +N Sbjct: 254 WLTNNACNLARSLFQVYKFPTPGSRAAEEKEIRDHRQENAR 294 >gi|119963653|ref|YP_949872.1| 60Kd inner membrane family protein [Arthrobacter aurescens TC1] gi|119950512|gb|ABM09423.1| putative 60Kd inner membrane family protein [Arthrobacter aurescens TC1] Length = 329 Score = 170 bits (432), Expect = 5e-40, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 116/264 (43%), Gaps = 33/264 (12%) Query: 330 FEMLIDWGWFYFIAKPMFML---MSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQY 383 F I + + + ++ M +S+ N + ++I+ + ++ P+ KQ Sbjct: 3 FFETIMFPFKWLVSIIMVGFHEGLSFIGLPAANGWTWTLSIIGLVLVIRAALIPVFVKQI 62 Query: 384 VSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 + M+ +QP + +L+ K+K Q + + + LYK H NP + C P+L+Q+P Sbjct: 63 KAQRGMQLLQPDLKKLQTKYKGKTDQLSRQAMAQEQMALYKKHGTNPFSACLPMLIQMPF 122 Query: 440 FFAIYKVIS---ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY----------LPG 486 FFA+++V+S + + + + D ++IF + Sbjct: 123 FFALFQVLSGISTNAKQGQGVGAMSHEQVVQFDSSSIFGAPLSASLLHGDPSGGNSAVAV 182 Query: 487 FMHVGIWPIIMSLSMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPA 536 ++ + I M+ S FI K P + Q M+L +P+VF +FP Sbjct: 183 WVLSIVMIIAMTASQFITQKQIMAKNMSEEAMASPFMRQQKMMLYILPLVFGIGGINFPI 242 Query: 537 GLIIYWSWSNVISIVQQAVIMKMH 560 G++IYW+ +N+ ++ QQ +++ Sbjct: 243 GVLIYWTTTNLWTMGQQFFVIRRM 266 >gi|157694477|ref|YP_001488939.1| OxaA-like protein precursor [Bacillus pumilus SAFR-032] gi|157683235|gb|ABV64379.1| stage III sporulation protein J [Bacillus pumilus SAFR-032] Length = 263 Score = 170 bits (431), Expect = 5e-40, Method: Composition-based stats. Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 31/247 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L++Y NL G N+G+AI++ T+ ++LL PL KQ ST M+ +QP++ Sbjct: 41 WNSYIVYPLSQLITYMANLTGENYGVAIIIVTLLIRLLILPLMIKQLRSTKAMQALQPEL 100 Query: 397 DELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ + Q+ + L++ + +NPLAGC+PIL+Q+P+ Y I + E+ Sbjct: 101 KKLREKYSSKDQKTQQQLQQETMALFQKNGVNPLAGCFPILIQMPILIGFYHAIMRTAEI 160 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 + F + DL + DP + PII ++ FIQ K+ P Sbjct: 161 KKHTFLWF--DLGSPDPLFLL-------------------PIIAGVATFIQQKLMMAGNP 199 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + A++L MP++ + SFPA L +YW N+ I+Q VI ++ L + Sbjct: 200 SDNPQMAIMLWVMPIMIIVFAISFPAALSLYWVVGNIFMIIQTLVIK---TPQVKLDTKE 256 Query: 571 RSTFSKN 577 ++ +K Sbjct: 257 KAGGNKK 263 >gi|269977737|ref|ZP_06184697.1| membrane protein OxaA [Mobiluncus mulieris 28-1] gi|306817498|ref|ZP_07451242.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|307699977|ref|ZP_07637028.1| membrane protein insertase, YidC/Oxa1 family [Mobiluncus mulieris FB024-16] gi|269934041|gb|EEZ90615.1| membrane protein OxaA [Mobiluncus mulieris 28-1] gi|304649722|gb|EFM47003.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|307615015|gb|EFN94233.1| membrane protein insertase, YidC/Oxa1 family [Mobiluncus mulieris FB024-16] Length = 445 Score = 170 bits (431), Expect = 5e-40, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 112/279 (40%), Gaps = 38/279 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG----------NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 Y + +M + L+ + ++I+ TVFV+LL PL KQ +T Sbjct: 20 ILYPFMWVIGWIMRGIHELLALAGVSSGAGVGWVLSIVGLTVFVRLLLVPLFVKQIKATR 79 Query: 388 NMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 M QP++ +++K+K Q +Q+ + + + + A C PIL Q+PVFFA+ Sbjct: 80 AMSLAQPEMSAIQKKYKGKRDQQSMIRMQEETRAVQRKYGASMSASCLPILFQMPVFFAL 139 Query: 444 YKVISISLEMR-----HAPFWGWIKDLAAAD--PTNIFTLFGILPFYLPG-----FMHVG 491 Y+++ + G + + A D + F L + PG + VG Sbjct: 140 YRLLYNMKPIADGVLPGHDSIGGMGQVQAQDLWHSTFFGQSLGLTMFGPGSIMSTKIVVG 199 Query: 492 IWPIIMSLSMFIQ------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 + + LSM Q S P K ++ MP++++F GL+ Sbjct: 200 LMVAYLVLSMLFQTAFLTMKNMSQEQLNSDNPMVKSTKSMMYLMPLMYLFTGPVVQVGLL 259 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 +YW SN I+QQ IM+ + R + Sbjct: 260 VYWVTSNTWMILQQFFIMRAFPTRGSAAAKWREAAHEKK 298 >gi|295103712|emb|CBL01256.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Faecalibacterium prausnitzii SL3/3] Length = 353 Score = 170 bits (431), Expect = 5e-40, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 110/291 (37%), Gaps = 49/291 (16%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +FY ++ P+ +M + Y L+ N+G I+L T+ + ++ PL Q S A M QP I Sbjct: 3 FFYILSGPLGYVMEWIYKLLPNYGWDIILFTLLINIVKIPLQTSQQKSMAKMSAFQPMIA 62 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE----- 452 E++ K+K P+ Q+ +++L + P AGC P+LL V F + V+ LE Sbjct: 63 EIQTKYKN-KPEKQQEELMKLQQDFGYKPTAGCVPMLLNFLVMFGVIGVVYNPLERIFHI 121 Query: 453 ------------------------------MRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 A G + A I + F Sbjct: 122 SAAALASAGEALTAAGISFTAITRDTNIIAEVVAGNSGVLGCFTAQQIATITEFSQHMNF 181 Query: 483 YLPGFMHVGIW------------PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 + + I M LS I MK S + + MP++++F Sbjct: 182 FGIDLTRIPKLGLSLDIVLPLLSVITMFLSTHISMKASGQQMQGSMKLTMYMMPLMYLFF 241 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 ++P +Y+ SN++ Q V+ K + E + + + + + Sbjct: 242 CFTYPLAFSLYYVISNIVMTAQTQVMRKFYDPE-KMRKEVEAEIAAKRKQE 291 >gi|220930846|ref|YP_002507755.1| hypothetical protein Ccel_3488 [Clostridium cellulolyticum H10] gi|220001174|gb|ACL77775.1| 60 kDa inner membrane insertion protein [Clostridium cellulolyticum H10] Length = 281 Score = 170 bits (431), Expect = 5e-40, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 51/281 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 F + +P+ + + Y + N+G+A+++ T+ V+ + PL +QY S+A M+ +QP + Sbjct: 2 FDILIRPLGQFLYWIYKTIAFENYGLALIIFTIIVRSIMVPLTLRQYKSSAEMQKVQPLL 61 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E++ K+ + L + M++LY+ H INP GC P+L+Q+P+ A+++ I+ L+ Sbjct: 62 QEIQRKYANDKAK-LNEEMMKLYQEHKINPAGGCLPLLIQMPILLALWQAITKPLKYMLG 120 Query: 457 PFWGWIKDL---------AAADPTNIFTLF---------GILPFYLPGF---MHVGIWPI 495 + +L +A N T F G L + P +++G P Sbjct: 121 FTATQLNNLAVESKIPINSAYSEINTITHFMSRGEGEKVGNLNMFFPSHGFGINLGDIPT 180 Query: 496 --------------------IMSLSMFIQMKMSPP-------PADKGQAMILNWMPVVFV 528 I +L+ ++ ++MS P A+ ++ P++ + Sbjct: 181 WHFNEIVNNPKNAVLLLLPLIATLTTYLTVRMSMPKSKTTDKAANPMGNSMMYISPIMTL 240 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 FPAGL +YW NV +I QQ + K + + + Sbjct: 241 IFSFQFPAGLALYWIAGNVFAIAQQYYVNKYVLNKKEEVSK 281 >gi|312133635|ref|YP_004000974.1| yidc2 [Bifidobacterium longum subsp. longum BBMN68] gi|311772893|gb|ADQ02381.1| YidC2 [Bifidobacterium longum subsp. longum BBMN68] Length = 335 Score = 170 bits (431), Expect = 5e-40, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 110/255 (43%), Gaps = 35/255 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-------------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WG+ Y I P+ L ++ +V ++ +AI++ + V+ FPL KQ Sbjct: 13 WGFLYKILTPVEWLQTWIMKIVHDFFVMLGVSPIGVSWVLAIIILVLVVQACIFPLFYKQ 72 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIP 438 S M+ + PK+ ++ K+K Q + + ++LY+ ++ NP C P+L+Q P Sbjct: 73 MKSMRKMQALAPKMQRIQNKYKGKTDQASKEAMSRETMKLYQDNDANPAGSCLPMLIQGP 132 Query: 439 VFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFY-------LPGFMHV 490 VF +++ +S + + D+A A +FGI+ G + Sbjct: 133 VFMSMFYTLSAIPYIANGKRDALGAFDVATAKQFTQTDVFGIVSVTDNFTSAAASGKAVI 192 Query: 491 GIWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLII 540 GI+ +M ++ S + Q +L PV+++F+ + P +++ Sbjct: 193 GIFVFLMCFCLWFMQYFSMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGVAMPFAVLV 252 Query: 541 YWSWSNVISIVQQAV 555 YW +NV ++ + Sbjct: 253 YWLTNNVCNLCRTLW 267 >gi|9743337|gb|AAF97961.1|AC000103_11 F21J9.16 [Arabidopsis thaliana] Length = 519 Score = 170 bits (431), Expect = 5e-40, Method: Composition-based stats. Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 45/287 (15%) Query: 338 WFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTA---- 387 WF IA M ++ + + ++G AI+L TV VK FPL KKQ + Sbjct: 96 WFSGIANYMETILKVLKDGLSTVHVPYSYGFAIILLTVLVKAATFPLTKKQVFTMISFLV 155 Query: 388 ----------------NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 MK++ P+I ++E++ + +Q +LYK INPLAGC Sbjct: 156 HVIELVVYSLQVESAMAMKSLTPQIKAIQERYAGD-QEKIQLETARLYKLAGINPLAGCL 214 Query: 432 PILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLAAADP-------TNIFTLF----GI 479 P L IPV+ +Y+ +S E + WI LA + I LF G Sbjct: 215 PTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFIEGH 274 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 P P + + P+++ S ++ Q S PA K + +P++ + S Sbjct: 275 PPLGWPDTLAYLVLPLLLVFSQYLSIQIMQSSQSNDPAMKSSQAVTKLLPLMIGYFALSV 334 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 P+GL +YW +N++S QQ + K GA+ + ++ + +K +Q Sbjct: 335 PSGLSLYWLTNNILSTAQQVWLQKYGGAKNPV-EKFTNLVTKEDKTQ 380 >gi|28493772|ref|NP_787933.1| inner membrane protein translocase component YidC [Tropheryma whipplei str. Twist] gi|28476814|gb|AAO44902.1| stage III sporulation protein J-like protein [Tropheryma whipplei str. Twist] Length = 333 Score = 170 bits (431), Expect = 6e-40, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 43/271 (15%) Query: 330 FEMLIDW--GWFYFIAKPMFMLMSYFYNLVG----------NFGIAIMLTTVFVKLLFFP 377 F+ L D+ I + ++ +F+ L+G ++ ++I+ + ++ P Sbjct: 25 FDGLFDFLQNILLPIKWVIEQILVFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLIP 84 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPI 433 + KQ + M I P++ ++EK+K Q + + M+++Y+ NPL+ C PI Sbjct: 85 VFLKQIRAQRKMLEIAPEVRRIQEKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLPI 144 Query: 434 LLQIPVFFAIYKVI---------------SISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 +LQ+PVFF +Y+VI + ++ R + +G + L + + + L Sbjct: 145 VLQMPVFFGLYQVIESAQNAGTGVGPLNGPLGMDFRDSRIFGVVP-LHDSFSHDFYALQA 203 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM-----KMSPPPAD-----KGQAMILNWMPVVFV 528 F L + G+ IM K P A K Q ++L +P++F+ Sbjct: 204 GQAFNLITMIVAGVLTAIMIAVQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFL 263 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAV-IMK 558 SFP G++IYW+ SNV S VQQAV I + Sbjct: 264 GMGFSFPVGILIYWTASNVWSAVQQAVAIYR 294 >gi|296875720|ref|ZP_06899785.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis ATCC 15912] gi|296433290|gb|EFH19072.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis ATCC 15912] Length = 279 Score = 170 bits (431), Expect = 6e-40, Method: Composition-based stats. Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 23/224 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW F+ + F + GN G+ I++ T+ ++ + PL + Q ST M+ IQP + Sbjct: 41 GWERFVYFFAEAI--RFLSFGGNIGVGIIVFTIVIRTVLLPLFQYQMNSTRKMQEIQPLL 98 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ L + M LYK + + P+L+Q+PV A+++ +S + Sbjct: 99 KELQAKYPGKDLDSRTKLSEEMRALYKEKGVKTSSAFLPLLIQMPVLMALFQALSRVEFL 158 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + DL A DPT I + L + ++ + P + Sbjct: 159 KVG--HFLWLDLGAIDPTYILPVLAALFTFFSSWL----------------TNKAMPERN 200 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ MPV+ F +G+ +YW SN + Q ++ Sbjct: 201 GSATTMMYVMPVMIFFFALFSASGVALYWVTSNAYQVGQTYLLN 244 >gi|224001688|ref|XP_002290516.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973938|gb|EED92268.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 446 Score = 170 bits (431), Expect = 6e-40, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 120/243 (49%), Gaps = 23/243 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 GWF F+ P+ L+ + + + +GI+I+ TV +K L FPL K Q ST M Sbjct: 110 GWFGFLTLPIEGLLKLIHGGLDSMGMSSNAWGISIIAMTVVIKALTFPLTKSQLESTNKM 169 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK-VIS 448 + +QP I L+ K++ +P +V+ + + ++Y+T+ +NPLAGC P L+QIPVF +Y+ V++ Sbjct: 170 QALQPTIKSLQAKYQSNP-EVMNQKIAEVYQTNEVNPLAGCIPSLVQIPVFIGLYRAVLN 228 Query: 449 ISLEMRHAPFWGWIKDLAAA----------DPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 ++ E + ++ +L D + G+ + P+ ++ Sbjct: 229 LAKENALDEPFLFLPNLEGPTYGADPAHGSDWLFKNWVDGVPGLGWEDTIAFLSIPVFLT 288 Query: 499 LSMFIQMKMSPP----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 +S I M M P P + +IL +P + + + PA L +YW +N+++ Sbjct: 289 ISQVISMNMMQPKTDDPQQQQANVILKVLPFMIGWFALNVPAALGVYWVVNNIVTTATTL 348 Query: 555 VIM 557 + Sbjct: 349 YVR 351 >gi|325965292|ref|YP_004243198.1| preprotein translocase subunit YidC [Arthrobacter phenanthrenivorans Sphe3] gi|323471379|gb|ADX75064.1| preprotein translocase subunit YidC [Arthrobacter phenanthrenivorans Sphe3] Length = 326 Score = 170 bits (431), Expect = 6e-40, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 113/263 (42%), Gaps = 32/263 (12%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQY 383 F I + + + ++ M + + ++I+ + ++ P+ KQ Sbjct: 3 FFETIMFPFKWLVSIIMVGFHEGLTAIGLPEASGWTWTLSIIGLVLVIRAALIPVFVKQI 62 Query: 384 VSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 + M+ +QP + +L++K+K Q + + + +YK H NP + C P+L+Q+P Sbjct: 63 KAQRGMQLLQPDLKKLQDKYKGKTDQLSRQAMAQEQMAMYKKHGTNPFSACLPMLIQMPF 122 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG------ILPFYLPGFMHVGIW 493 FFA++ V+S + + T+FG +L PG V +W Sbjct: 123 FFALFTVLSGISTASRGGEGIGAMNHEQVVQFDQSTIFGAPLSATLLHGTPPGGNVVAVW 182 Query: 494 PI------IMSLSMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAG 537 + M+ S FI K P + Q M+L +P+VF +FP G Sbjct: 183 ILSILMILAMTASQFITQKQIMAKNMSEEAMASPFMRQQKMMLYILPIVFGVGGINFPIG 242 Query: 538 LIIYWSWSNVISIVQQAVIMKMH 560 ++IYW+ +N+ ++ QQ +++ Sbjct: 243 VLIYWTTTNLWTMGQQFFVIRRM 265 >gi|225016764|ref|ZP_03705956.1| hypothetical protein CLOSTMETH_00676 [Clostridium methylpentosum DSM 5476] gi|224950432|gb|EEG31641.1| hypothetical protein CLOSTMETH_00676 [Clostridium methylpentosum DSM 5476] Length = 348 Score = 170 bits (431), Expect = 6e-40, Method: Composition-based stats. Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 45/287 (15%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + P+ ++ Y +V N+G+AI++ T+ +K+ P+A KQ S+A M QP+I Sbjct: 6 IYELFGTPLGYVIWAIYQVVKNYGVAIIIFTIILKVAMLPIAIKQQKSSAKMGAFQPRIA 65 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV----------I 447 E+ +K+ ++P Q Q+ + +LY+ +P+ GC P+L+Q + F I V + Sbjct: 66 EINKKYAKNP-QKKQEELTKLYEEEGYSPMKGCLPMLIQFVILFGIIDVVYKPLTHILHL 124 Query: 448 SISLEMRHAPFWG----------WIKDLAAADPTNI---------------FTLFGILPF 482 S + + A G I D DP+ G+ Sbjct: 125 SKDVIAKAAEIIGGNAGAMNQQLKIVDAIQQDPSKFSELGQNVIDKVNSLDLNFLGLNLG 184 Query: 483 YLPGFMHV-GIWPIIMS----LSMFIQMKMSP---PPADKGQAMILNWMPVVFVFALSSF 534 +P + + I PI+ L MF+ MKM+P P M++ MP+ V+ S Sbjct: 185 SVPNWTSILIIIPILAGIFSFLQMFVSMKMNPMGETPGAGSMKMMMFVMPIFSVWITFSV 244 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 P G+ IYW + V+ I Q ++ K++ + L ++ + + ++ Sbjct: 245 PVGVGIYWILTYVVGIGQVLLLNKLYNPK-ELREQAIAEMEERQKAR 290 >gi|227547516|ref|ZP_03977565.1| inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212031|gb|EEI79927.1| inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 335 Score = 170 bits (431), Expect = 6e-40, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 35/255 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-------------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WG+ Y I P+ L ++ +V ++ +AI++ + V+ FPL KQ Sbjct: 13 WGFLYKILTPVEWLQTWIMKIVHDFFVMLGVSPIGVSWVLAIIILVLVVQACIFPLFYKQ 72 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGCWPILLQIP 438 S M+ + PK+ ++ K+K Q ++AM ++LY+ ++ NP C P+L+Q P Sbjct: 73 MKSMRKMQALAPKMQRIQNKYKGKTDQASKEAMSREIMKLYQDNDANPAGSCLPMLIQGP 132 Query: 439 VFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFY-------LPGFMHV 490 VF +++ +S + + D+A A +FGI+ G + Sbjct: 133 VFMSMFYTLSAIPYIANGKRDALGAFDVATAKQFTQTDVFGIVSVTDNFTSAAASGKAVI 192 Query: 491 GIWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLII 540 GI+ +M ++ S + Q +L PV+++F+ + P +++ Sbjct: 193 GIFVFLMCFCLWFMQYFSMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGVAMPFAVLV 252 Query: 541 YWSWSNVISIVQQAV 555 YW +NV ++ + Sbjct: 253 YWLTNNVCNLCRTLW 267 >gi|116672711|ref|YP_833644.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24] gi|116612820|gb|ABK05544.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24] Length = 324 Score = 170 bits (430), Expect = 6e-40, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 104/225 (46%), Gaps = 24/225 (10%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS----PPQVLQKAM 415 + ++I+ + ++ P+ KQ + M+ +QP + +L++K+K Q + + Sbjct: 39 WTLSIIGLVLVIRAALIPVFVKQIKAQRGMQLLQPDLKKLQDKYKGKTDQLSRQAMAQEQ 98 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW---GWIKDLAAADPTN 472 + +YK H NP + C P+L+Q+P FFA+++V+S R + + D ++ Sbjct: 99 MAMYKKHGTNPFSACLPMLIQMPFFFALFQVLSGITAARTKGAGIGAMSHEQVVQFDDSS 158 Query: 473 IFTLFGILPFYLPG-------FMHVGIWPIIMSLSMFIQMKM----------SPPPADKG 515 IF G ++ + + M+ S FI K P + Sbjct: 159 IFGATLSASLLHGGAGNQTAVWILSIVMILAMTASQFITQKQIMAKNMSEEAMASPFMRQ 218 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 Q M+L +PVVF +FP G++IYW+ +N+ ++ QQ +++ Sbjct: 219 QKMMLYILPVVFGVGGINFPIGVLIYWTTTNLWTMAQQFFVIRRM 263 >gi|295111773|emb|CBL28523.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Synergistetes bacterium SGP1] Length = 259 Score = 170 bits (430), Expect = 7e-40, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 27/243 (11%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 L+ Y + ++G+AI+L TV V++ PL +KQ VS M+ +QP+I L+ K+ Sbjct: 1 MWLLETLYGVTNSWGLAIILLTVIVRIAMHPLTQKQMVSMQRMQKLQPRIKVLQNKYGDD 60 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS---------LEMRHAP 457 + L + M+ LYK I+P AGC P+L+Q+P+F +Y+V+ + + + + Sbjct: 61 K-ETLNREMMALYKEEKISPAAGCLPLLIQLPIFILLYRVLYNNDFAGATFLTVHLDGSV 119 Query: 458 FWGWIKDLAAADPTNI-------------FTLFGILPFYLPG---FMHVGIWPIIMSLSM 501 L D + F+ F LP ++ I I+++ Sbjct: 120 LTTMADALNLVDKAGVPIPRDQLGVVMVFFSSFTNLPLLFSNVGMWLPNMILLILIAFLT 179 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + Q +S + AM+ +MP++ F G+++YW S+++ +V Q +M+ Sbjct: 180 WYQQHLS-SAGNPQMAMMSWFMPLLLTFICIGLQGGVLLYWGVSSLMGVVHQLRVMRKTD 238 Query: 562 AEI 564 E+ Sbjct: 239 EEM 241 >gi|302336545|ref|YP_003801752.1| membrane protein insertase, YidC/Oxa1 family [Olsenella uli DSM 7084] gi|301320385|gb|ADK68872.1| membrane protein insertase, YidC/Oxa1 family [Olsenella uli DSM 7084] Length = 252 Score = 170 bits (430), Expect = 7e-40, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 109/228 (47%), Gaps = 6/228 (2%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +FI+ + ++ G++GIA+++ T ++L+ PL + S+A M+ +QPK+ Sbjct: 2 WDWFIS-FLMHVLESLAGWAGDWGIAVIILTFIMRLIVMPLMTRSTASSARMQALQPKMK 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E++ ++ P + + + M + Y H NPL GC P+L+Q+PVF A++ V H Sbjct: 61 EIQNRYADDP-ERMNEEMRKFYSEHKFNPLGGCLPVLVQMPVFVALFTVAKNVPADAHFL 119 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 +AA + G L + L + ++ + M + ++ + + Sbjct: 120 SIMPSLSQSAAGALASGGVAGALVYILFDV----AFGVLTLVPMIMNLQNTSDEQRQQTL 175 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 ++ M V+ ++ S P +++Y+ S + + QQ ++ + ++ Sbjct: 176 IMGVVMAVMMLWFGWSAPGAVLLYYDTSAIWQVAQQKIVTQRVMQKVK 223 >gi|220914666|ref|YP_002489975.1| hypothetical protein Achl_3934 [Arthrobacter chlorophenolicus A6] gi|219861544|gb|ACL41886.1| 60 kDa inner membrane insertion protein [Arthrobacter chlorophenolicus A6] Length = 324 Score = 170 bits (430), Expect = 8e-40, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 114/263 (43%), Gaps = 33/263 (12%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVG-------NFGIAIMLTTVFVKLLFFPLAKKQ 382 F I + + + ++ M L+G + ++I+ + ++ P+ KQ Sbjct: 3 FFETIMFPFKWLVSIIMVGFHEGL-TLIGMPAANGWTWTLSIIGLVLVIRAALIPVFVKQ 61 Query: 383 YVSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 + M+ +QP + +L++K+K Q + + + +YK H NP + C P+L+Q+P Sbjct: 62 IKAQRGMQLLQPDLKKLQDKYKGKTDQLSRQAMAQEQMAMYKKHGTNPFSACLPMLIQMP 121 Query: 439 VFFAIYKVISISLEMRHAPFW---GWIKDLAAADPTNIFTLFGILPFYLPG--------F 487 FFA+++V+S A + D ++IF G + Sbjct: 122 FFFALFQVLSGISNNAKAGQGVGAMSHDQVVQFDESSIFGAPLSASLLHGGGGGNQTAVW 181 Query: 488 MHVGIWPIIMSLSMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAG 537 + + + M+ S FI K P + Q M+L +P+VF +FP G Sbjct: 182 ILSIVMILAMTASQFITQKQIMAKNMSEEAMASPFMRQQKMMLYILPIVFGVGGINFPIG 241 Query: 538 LIIYWSWSNVISIVQQAVIMKMH 560 ++IYW+ +N+ ++ QQ +++ Sbjct: 242 VLIYWTTTNLWTMGQQFFVIRRM 264 >gi|331701545|ref|YP_004398504.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus buchneri NRRL B-30929] gi|329128888|gb|AEB73441.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus buchneri NRRL B-30929] Length = 343 Score = 169 bits (429), Expect = 8e-40, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 36/253 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNIQP 394 + ++A+P +M + VG++G AI++ TV V+L P+ +Q M+ I+P Sbjct: 37 YDYLARPAQAIMEWIAQFVGSYGWAIIVLTVVVRLFLLPIMVRQMKASTIQQEKMQLIRP 96 Query: 395 KIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVIS 448 ++ EL+++ K + Q +AM+ LYK + I+ G C P+L+Q+P+F A+Y I Sbjct: 97 QMAELQKRQKAASTPEEQTAASQAMMALYKQNGISMTGGIGCLPLLIQMPIFTALYAAIR 156 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S E+ H F G ++ + + + L G +I M + Sbjct: 157 YSPELSHTVFMGIRLGQSS----WLLAVLSFASYLLQG---------------YIAMLGT 197 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P K ++ P++ + S PAGL IY+ + + +Q +I Sbjct: 198 PAAQKKQMGAMMLLSPIMILVFTLSAPAGLGIYFFIGGLFACLQTLIIN-------MYRP 250 Query: 569 RLRSTFSKNYNSQ 581 R+R +K + Sbjct: 251 RIRKRIAKENEGK 263 >gi|260893979|ref|YP_003240076.1| membrane protein insertase, YidC/Oxa1 family [Ammonifex degensii KC4] gi|260866120|gb|ACX53226.1| membrane protein insertase, YidC/Oxa1 family [Ammonifex degensii KC4] Length = 231 Score = 169 bits (429), Expect = 9e-40, Method: Composition-based stats. Identities = 70/228 (30%), Positives = 124/228 (54%), Gaps = 28/228 (12%) Query: 339 FYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F + M L+ + Y + V N+G+AI++ T+ V+L+ FPL +Q S ++ + Sbjct: 5 FGKLVTGMATLLEWLYKVTVAIGVPNYGLAIIMLTILVRLVLFPLNYRQMRSVVALQQLH 64 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV-ISISLE 452 PKI EL+E++KQ P Q LQ+ +++LY+ HN+NP+AGC P+L+Q+P+ A+Y+ +S Sbjct: 65 PKIKELQERYKQDP-QKLQQKLMELYREHNVNPMAGCLPLLIQLPILIALYRALLSFPYT 123 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511 + + W+ L+ DP I P++ ++ + QMK++P Sbjct: 124 VAEHARFLWVPSLSHTDPYFIL-------------------PVLAGVTTYWQMKITPQAA 164 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ Q M+ M + ++ ++ PAGL +YW N+IS+ QQ K Sbjct: 165 GQEQQQRMMGILMSGMILWISATLPAGLALYWVVYNLISVAQQYFFNK 212 >gi|88854496|ref|ZP_01129163.1| putative inner membrane protein translocase component YidC [marine actinobacterium PHSC20C1] gi|88816304|gb|EAR26159.1| putative inner membrane protein translocase component YidC [marine actinobacterium PHSC20C1] Length = 325 Score = 169 bits (429), Expect = 9e-40, Method: Composition-based stats. Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 36/254 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVG----------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + I + ++ F+ L+ + ++I+ + V+ P+ +Q S Sbjct: 11 LWPIKWVIEAILVAFHTLLSAVGMDGDAGLTWVLSIVGLVLVVRAALIPVFVRQIKSQRR 70 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 M + P++ ++++K+K Q + + + +YK NP + C P+LLQ+P+FF ++ Sbjct: 71 MMEVAPQLKKIQDKYKGKKDQFSREAMSRETMAMYKNAGTNPFSSCLPLLLQMPIFFGLF 130 Query: 445 KVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP--------- 494 V+ LE A DLA + T+ +LF I P +L G P Sbjct: 131 SVLREAQLEDNPAGVGLLNADLAQSFGTS--SLFDIAPLHLAISTAEGNIPVIITAVIMV 188 Query: 495 IIMSLSMFIQM----------KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I+M+ S FI +M P + Q ++L +P+VF F+ +FP G++ YW Sbjct: 189 ILMTGSQFITQLQIMSKNQSAEMKASPMYRQQRIMLYMLPLVFAFSGFTFPLGVMFYWLV 248 Query: 545 SNVISIVQQAVIMK 558 SN ++ QQ ++++ Sbjct: 249 SNFWTMGQQFLVIR 262 >gi|224283948|ref|ZP_03647270.1| 60 kDa inner membrane insertion protein [Bifidobacterium bifidum NCIMB 41171] Length = 336 Score = 169 bits (429), Expect = 9e-40, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 116/281 (41%), Gaps = 37/281 (13%) Query: 336 WGWFYFIAKPMFMLMSY----FYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WGW Y + P+ LM+ F+ + ++ +AI+ + V P+ KQ Sbjct: 14 WGWLYKLLTPLEWLMTQVMVLFHKFLTLLGMAPIGISWVLAIVFLVLVVHACILPIYLKQ 73 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIP 438 S M+ +QPK+ ++ K+K Q + + M++LY+ ++ NP+ CW ++Q P Sbjct: 74 MKSMRKMQALQPKMQHIQNKYKGKKDQASKEAMSREMMKLYQDNDANPMGSCWTAVIQGP 133 Query: 439 VFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYL------PGFMHVG 491 VF ++ ++S + D A A +FG+ G + +G Sbjct: 134 VFMCMFYMLSAIPYIATGKRGALGAFDQATAKQFAQTRVFGVSVTDTFGTANNSGKVVIG 193 Query: 492 IWPIIMSLSMFIQM-----KMSPPPAD-----KGQAMILNWMPVVFVFALSSFPAGLIIY 541 + ++M M+ K P + K Q + P++++F+ FP +++Y Sbjct: 194 FFILLMCACMWYMQFNNMRKNLPKASMQGSTYKMQQAMTWGFPIMYIFSGIMFPFAVLVY 253 Query: 542 WSWSNVISIVQQAV-IMKM--HGAEIGLIDRLRSTFSKNYN 579 W +N ++ + + K G+ +R +N Sbjct: 254 WLTNNACNLARSLFQVYKFPTPGSRAAEEKEIRDHRQENAR 294 >gi|224107717|ref|XP_002314575.1| 60 kDa inner membrane protein [Populus trichocarpa] gi|222863615|gb|EEF00746.1| 60 kDa inner membrane protein [Populus trichocarpa] Length = 292 Score = 169 bits (429), Expect = 1e-39, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 118/254 (46%), Gaps = 24/254 (9%) Query: 338 WFYFIAKPMFMLMSYFYN------LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 W I + + + L +G AI+L TV VK FPL+KKQ S M++ Sbjct: 34 WLSGITYGLESTLKVLKDGLSAVHLPYAYGFAIILLTVLVKAATFPLSKKQVESAMAMRS 93 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP+I +++++ + +Q +LYK INPLAGC P L IPV+ +Y+ +S Sbjct: 94 LQPQIKAIQQRYAGD-QERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 152 Query: 452 -EMRHAPFWGWIKDLAAA-------DPTNIFTLF----GILPFYLPGFMHVGIWPIIMSL 499 E + WI LA + + I LF G P + + P+++ + Sbjct: 153 NEGLLTEGFFWIPSLAGPTAIASRQNGSGISWLFPFVDGHPPLGWSDTVAYLVLPVMLVV 212 Query: 500 SMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 S +I Q S P K I ++P++ + S P+GL +YW +N++S QQ Sbjct: 213 SQYISVQIMQSSQSDDPNVKNSQAITKFLPLMIGYFSLSVPSGLSLYWLTNNILSTAQQV 272 Query: 555 VIMKMHGAEIGLID 568 + K GA+ ++ Sbjct: 273 WLQKSGGAKNPMMK 286 >gi|312867510|ref|ZP_07727718.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parasanguinis F0405] gi|311096916|gb|EFQ55152.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parasanguinis F0405] Length = 293 Score = 169 bits (429), Expect = 1e-39, Method: Composition-based stats. Identities = 51/224 (22%), Positives = 94/224 (41%), Gaps = 23/224 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW F+ + F + G+ G+ I++ T+ ++ + PL + Q ST M+ IQP + Sbjct: 33 GWERFVYFFAEAI--RFLSFGGSIGVGIIVFTIVIRTVLLPLFQYQMNSTRKMQEIQPLL 90 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ L + M LYK + + P+L+Q+PV A+++ +S + Sbjct: 91 KELQAKYPGKDLDSRTKLSEEMRALYKEKGVKTSSAFLPLLIQMPVLMALFQALSRVEFL 150 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + DL A DPT I + L + ++ + P + Sbjct: 151 KVG--HFLWLDLGAIDPTYILPVLAALFTFFSSWL----------------TNKAMPERN 192 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ MPV+ F +G+ +YW SN + Q ++ Sbjct: 193 GSATTMMYVMPVMIFFFALFSASGVALYWVTSNAYQVGQTYLLN 236 >gi|317131004|ref|YP_004097286.1| membrane protein insertase, YidC/Oxa1 family [Bacillus cellulosilyticus DSM 2522] gi|315475952|gb|ADU32555.1| membrane protein insertase, YidC/Oxa1 family [Bacillus cellulosilyticus DSM 2522] Length = 268 Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats. Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 13/224 (5%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W F P+ LM N+ N FGI+I++ T+ +++L PL KQ ST M+ IQP++ Sbjct: 36 WDSFFVYPLSWLMIEIANIFNNSFGISIIIVTLLIRILILPLMIKQTKSTKAMQAIQPEM 95 Query: 397 DELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 ELREK+ Q QK + L++ H +NPLAGC PIL+Q+P+ A Y I + + Sbjct: 96 KELREKYSAKDQQTQQKLQQETMALFQKHGVNPLAGCLPILVQMPILIAFYHAIIRTPYI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 L F L P+Y+ P+I + FIQ KM + Sbjct: 156 NPEVDIANYGHL-DPQVFLWFELGHADPYYI--------LPLIAGATTFIQQKMMMVTDN 206 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M++ MP++ + + FP+ L +YW N+ IVQ I Sbjct: 207 PQMRMMMYIMPLMIMAFAAFFPSALALYWVIGNLFMIVQTYFIT 250 >gi|219848108|ref|YP_002462541.1| 60 kDa inner membrane insertion protein [Chloroflexus aggregans DSM 9485] gi|219542367|gb|ACL24105.1| 60 kDa inner membrane insertion protein [Chloroflexus aggregans DSM 9485] Length = 313 Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats. Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 16/232 (6%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W F+ + L+ +F +L GN + I+L T+ +L PL S+ M+ +QP + Sbjct: 4 WSAFVGL-LEQLLLFFSSLTGNMALGIVLFTIAARLFILPLTLSSLRSSRRMQEVQPILK 62 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH-- 455 E++ K+ + P Q LQ+ +++Y+ + INP+ GC P+LLQ+P+FF +Y+ + + Sbjct: 63 EIQRKYGKDP-QRLQEETLRVYREYKINPVGGCLPLLLQLPIFFGVYQAVYHLMVPEQRV 121 Query: 456 -----APFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGIWPIIMSLSMFIQMKM 507 A + LA F + +P + P + P++ + +Q M Sbjct: 122 NLSAAAAEMLKDERLAQILSAPFFGMDLGVPAFGPNGFAGFAYLVLPVLSIVLQLVQQLM 181 Query: 508 -SPPPADKGQAMI---LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 +P D Q + MP VF + +FP G ++YW S+VI ++QQ Sbjct: 182 ATPRVQDPQQKAFTQAMLIMPFVFGYIAFTFPTGAVLYWVVSSVIGVIQQYF 233 >gi|313141100|ref|ZP_07803293.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] gi|313133610|gb|EFR51227.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] Length = 337 Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 116/281 (41%), Gaps = 37/281 (13%) Query: 336 WGWFYFIAKPMFMLMSY----FYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WGW Y + P+ LM+ F+ + ++ +AI+ + V P+ KQ Sbjct: 15 WGWLYKLLTPLEWLMTQVMVLFHKFLTLLGMAPIGISWVLAIVFLVLVVHACILPIYLKQ 74 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIP 438 S M+ +QPK+ ++ K+K Q + + M++LY+ ++ NP+ CW ++Q P Sbjct: 75 MKSMRKMQALQPKMQHIQNKYKGKKDQASKEAMSREMMKLYQDNDANPMGSCWTAVIQGP 134 Query: 439 VFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYL------PGFMHVG 491 VF ++ ++S + D A A +FG+ G + +G Sbjct: 135 VFMCMFYMLSAIPYIATGKRGALGAFDQATAKQFAQTRVFGVSVTDTFGTANNSGKVVIG 194 Query: 492 IWPIIMSLSMFIQM-----KMSPPPAD-----KGQAMILNWMPVVFVFALSSFPAGLIIY 541 + ++M M+ K P + K Q + P++++F+ FP +++Y Sbjct: 195 FFILLMCACMWYMQFNNMRKNLPKASMQGSTYKMQQAMTWGFPIMYIFSGIMFPFAVLVY 254 Query: 542 WSWSNVISIVQQAV-IMKM--HGAEIGLIDRLRSTFSKNYN 579 W +N ++ + + K G+ +R +N Sbjct: 255 WLTNNACNLARSLFQVYKFPTPGSRAAEEKEIRDHRQENAR 295 >gi|256398143|ref|YP_003119707.1| hypothetical protein Caci_9053 [Catenulispora acidiphila DSM 44928] gi|256364369|gb|ACU77866.1| 60 kDa inner membrane insertion protein [Catenulispora acidiphila DSM 44928] Length = 328 Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats. Identities = 69/282 (24%), Positives = 118/282 (41%), Gaps = 40/282 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 I +M ++ G ++ +AI+ T+ ++ PL +KQ S N Sbjct: 5 ILSPIIWATSFVMMLWHRAFGAIFGSDSSASWVLAIIFLTITIRAAMIPLFRKQIKSMQN 64 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP+I L++K+K Q LQ+ M++LYK + +P A C PILLQ P F +Y+V+S Sbjct: 65 MQRLQPQIQALQKKYKLDK-QKLQQEMMKLYKDNGTSPFASCMPILLQTPFFMGLYRVLS 123 Query: 449 I--------------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 S+ HA F+G L+ T + + I Sbjct: 124 HVSAGNAVGALSQSDSVSAMHASFFGAPLSLSFLHHTPAQMSRIGVTSVTNLQIIAIIMA 183 Query: 495 IIMSLSMFIQMKMS-----------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 II + S F+ +M P P + Q ++L MP +F + G+++Y Sbjct: 184 IIYATSQFLTQRMMMAKNTNLDNSVPNPMMQSQKIMLYVMPFGMLFFSLNVQIGVVLYLM 243 Query: 544 WSNVISIVQQAVIMKM-----HGAEIGLIDRLRSTFSKNYNS 580 +NV +I QQ ++ AE + R ++ + Sbjct: 244 TTNVWTIGQQFYTLRNSPMPGSQAEKEMFARNKAKEDRKRQD 285 >gi|229917458|ref|YP_002886104.1| 60 kDa inner membrane insertion protein [Exiguobacterium sp. AT1b] gi|229468887|gb|ACQ70659.1| 60 kDa inner membrane insertion protein [Exiguobacterium sp. AT1b] Length = 286 Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats. Identities = 75/228 (32%), Positives = 114/228 (50%), Gaps = 29/228 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W + P+ L+ LVG +GI+I++ T+ V+LL PL KQ S M+ +QP Sbjct: 42 WAKYFVWPLAWLLKEVAYLVGGPWQYGISIIIATIIVRLLILPLMIKQTKSMGAMQVLQP 101 Query: 395 KIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++ +LREK+ + LQ+ M++LY+ + INPLAGC PIL+Q+P+ FA Y I + Sbjct: 102 EMLKLREKYSSKDQETQRKLQEEMMKLYQEYQINPLAGCLPILIQMPILFAFYDAIRRTP 161 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-- 509 E+ A F + DL A DPT + PI+ ++ F Q K+S Sbjct: 162 EIFEANFLWF--DLGAPDPTFVL-------------------PILAAILTFAQQKISMAG 200 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + M+L PV+ + PA L +YW +ISI+ IM Sbjct: 201 QEQNPQLKMMLYIFPVMIFVMSINLPAALSLYWVVGYIISIIVTMAIM 248 >gi|229824628|ref|ZP_04450697.1| hypothetical protein GCWU000282_01975 [Catonella morbi ATCC 51271] gi|229785999|gb|EEP22113.1| hypothetical protein GCWU000282_01975 [Catonella morbi ATCC 51271] Length = 266 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 111/253 (43%), Gaps = 32/253 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ + + NL+G ++G+ I+L T+ + + PL K Q S M IQP+I Sbjct: 30 WDGYIIYPLSQFIIWLSNLLGGSYGLGIILFTIIILVALTPLTKMQMDSQFQMAEIQPEI 89 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +EL+++F + LQ+A L K +N AGC P+L+Q+PV FA+Y+VI+ + + Sbjct: 90 EELKKQFPNRDRASMEALQQAQQDLMKERGVNQFAGCLPLLIQLPVMFALYQVITRTEVL 149 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R F L ADP I + + + ++ V PI S Sbjct: 150 RDGHFLWLA--LGKADPYFILPILAAVLTWYSSYLTVKANPIQNGAS------------- 194 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG----------AE 563 + P + + +FPA + +YW SN + +VQ + + E Sbjct: 195 ---KAMTYVAPAMILLVSFNFPAAVTLYWVVSNAVRVVQTFIFYNPYKIIAQREAKRQEE 251 Query: 564 IGLIDRLRSTFSK 576 RLR K Sbjct: 252 KARQRRLRKALKK 264 >gi|308235529|ref|ZP_07666266.1| membrane protein insertase, YidC/Oxa1 family [Gardnerella vaginalis ATCC 14018] gi|311114011|ref|YP_003985232.1| membrane protein OxaA [Gardnerella vaginalis ATCC 14019] gi|310945505|gb|ADP38209.1| membrane protein OxaA [Gardnerella vaginalis ATCC 14019] Length = 335 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 116/254 (45%), Gaps = 34/254 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-------------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WGWFY I P+ LM+ +L ++ ++I+ + V FP K Sbjct: 14 WGWFYKILTPVEWLMTQVMSLFHKLFVLIGMNEIGFSWVLSIVFLVLVVHACIFPAFIKS 73 Query: 383 YVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 NM+ I PK+ ++++K+K + +Q+ M++LY+ +N NP C P+++Q P Sbjct: 74 IKGMRNMQAIAPKMKKIQQKYKGKSDPASKEAMQREMMKLYQENNANPAGSCLPMMIQGP 133 Query: 439 VFFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGI------LPFYLPGFMHVG 491 F +I+ +S+ + R D+A A +FG+ + G + + Sbjct: 134 AFMSIWYTLSVIPFIARGKHTALGAFDVATAQQFVKTHVFGVGVSDTFMTVQAGGKVVIV 193 Query: 492 IWPIIMSLSMFIQMKMS----------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 I+ I+M +M+ + P Q +++ P+++VF+ + P +++Y Sbjct: 194 IFVILMCAAMWYMQFNNIRKNLPPESKQGPQYTMQKLMMWGFPLIYVFSAFALPFAMLVY 253 Query: 542 WSWSNVISIVQQAV 555 W +N++++++ Sbjct: 254 WLVNNIMNMLRSIW 267 >gi|209558773|ref|YP_002285245.1| Membrane protein oxaA 1 precursor [Streptococcus pyogenes NZ131] gi|209539974|gb|ACI60550.1| Membrane protein oxaA 1 precursor [Streptococcus pyogenes NZ131] Length = 269 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 112/250 (44%), Gaps = 26/250 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW + + + + G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ Sbjct: 32 GWDQ-LVYLFARAIQWL-SFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPEL 89 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ Q L + LYK + +NP A P+L+Q+PV A+++ ++ + Sbjct: 90 RELQKKYAGKDTQTRMKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFL 149 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F +LA D + + + +L ++ ++ + Sbjct: 150 KTGTFLWV--ELAQHDHLYLLPVLAAVFTFLSTWL----------------TNLAAKEKN 191 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM---KMHGAEIGLIDRL 570 +++ MP++ F + +G+++YW+ SN +VQ ++ K+ L + Sbjct: 192 VMMTVMIYVMPLMIFFMGFNLASGVVLYWTVSNAFQVVQLLLLNNPFKIIAERQRLANEE 251 Query: 571 RSTFSKNYNS 580 ++ + + Sbjct: 252 KARRLRERRA 261 >gi|284993436|ref|YP_003411991.1| membrane protein insertase, YidC/Oxa1 family [Geodermatophilus obscurus DSM 43160] gi|284066682|gb|ADB77620.1| membrane protein insertase, YidC/Oxa1 family [Geodermatophilus obscurus DSM 43160] Length = 385 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 39/260 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------------NFGIAIMLTTVFVKLLFFPLAKKQY 383 ++ + +M+ ++ L + ++I+ V V+++ FPL KQ Sbjct: 2 LDWLYTAISWVMAQWHALWSLAFDDPEAGTGLSGLTWALSIVFLVVTVRVILFPLFVKQV 61 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S M+ +QP+I LR+++ Q +AM+++ + ++PLAGC PIL QIP+F ++ Sbjct: 62 KSQRAMQELQPEIARLRKQYGSD-RQGFSEAMLKMQRERGVSPLAGCLPILPQIPIFLSL 120 Query: 444 YKVISISLEMRHA--PFWGWIKDLAAADPTNIF--------------TLFGILPFYLPGF 487 + V+ + + D AA P + I Y Sbjct: 121 FHVLRRLAPDAQGLYSWSAELTDEAARAPFFGAPISSSFFMSGSKEQAILDITGGYGQIR 180 Query: 488 MHVGIWPIIMSLSMFIQMKMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + + +IMS + F K A Q M+L MP+ + FP G+++ Sbjct: 181 VVAFLLIVIMSFTTFFTQKQIMRRSGPVEGQAAMVQKMLLYVMPLGLFVSGFLFPIGVLL 240 Query: 541 YWSWSNVISIVQQAVIMKMH 560 YW +N+ ++ QQ I++ Sbjct: 241 YWFTNNLWTLGQQFFILRKM 260 >gi|15644210|ref|NP_229260.1| inner membrane protein, putative [Thermotoga maritima MSB8] gi|38503261|sp|Q9X1H2|OXAA_THEMA RecName: Full=Inner membrane protein oxaA gi|4982026|gb|AAD36529.1|AE001797_9 inner membrane protein, putative [Thermotoga maritima MSB8] Length = 445 Score = 169 bits (427), Expect = 2e-39, Method: Composition-based stats. Identities = 87/478 (18%), Positives = 184/478 (38%), Gaps = 97/478 (20%) Query: 96 GYHLDVSSN--SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 YH D+ TL+ Y + ++ + T +I I+T Sbjct: 41 EYHFDLEKGILKDFYTLVDGRKHVFTY--------GNDGFDVLDEGTPLTVIEEPIVTGV 92 Query: 154 TPIKLVFKNANNILF-----ERTISLD--EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK 206 + F + +I++ ++ ++ E+Y F + S + + + R Sbjct: 93 GKVSEGFSDEVSIVYNYGYVKKIFTIKNNENYTFFVDIE----SSKPVDVT----VPRVS 144 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 T+T+ + E + A K+ ++ + Sbjct: 145 VDTSTDRYL--ENYFASFNPKTR-------------------------------TLVLLK 171 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + +G R+ N+ T++ +++ + + + Sbjct: 172 HDEGLLFEGTLKVNGQKRFIVFMGPNKRTLIKKAF----------PEDYDVL--IKALVN 219 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 IP F W+ + + + +L NFG AIML T+ V+L+ +PL Q S Sbjct: 220 IPGFNK-----WYDSVFYGLVWFFWWLKDLTKNFGWAIMLFTLIVRLILYPLYHAQTKSL 274 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 NM+ +QP+I+ +++K+K P Q+A+++LY+ +NP +GC +L+Q+P+F ++ V Sbjct: 275 INMRKLQPQIEAIKKKYKD--PTKQQEALLKLYREAGVNPASGCLMLLIQLPIFMLLWSV 332 Query: 447 ISISL-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I + E ++ + KDL+A GF + ++ +I ++ + Sbjct: 333 IRYYVEEFAYSGSFLIWKDLSAG-----------------GFSNNWLFLVITIVASYYTT 375 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ A I M V+F F P+GL +Y++ + +I + K + + Sbjct: 376 LLTSQDARTAWQGI--IMSVIFPFLFVGLPSGLFLYYATNTLIQLAVTYYTYKRYKIK 431 >gi|222100006|ref|YP_002534574.1| Inner membrane protein oxaA [Thermotoga neapolitana DSM 4359] gi|221572396|gb|ACM23208.1| Inner membrane protein oxaA [Thermotoga neapolitana DSM 4359] Length = 445 Score = 169 bits (427), Expect = 2e-39, Method: Composition-based stats. Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 36/267 (13%) Query: 307 FLFAGAKEFPTIHH--------YEKDLA-IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 +F G + I K L IP F W+ + + + +L Sbjct: 191 TVFMGPNKRTLIKKAFPEDYESLMKALGNIPGFNR-----WYDTVFYGLVWFFWWLKDLT 245 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 +FG AI+L T+ V+L+ +PL Q S NM+ +QP+I+ +++K+K P Q+A+++ Sbjct: 246 KSFGWAIVLFTLIVRLILYPLYHAQTKSLINMRKLQPQIEAIKKKYKD--PAKQQEALLK 303 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLAAADPTNIFTL 476 LYK +NP +GC +L+Q+P+F ++ VI + E ++ + KDL+A Sbjct: 304 LYKEAGVNPASGCLMLLIQLPIFILLWSVIRYYVEEFAYSGGFLIWKDLSAG-------- 355 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 GF + I+ +I +S + ++ D A M ++F F P+ Sbjct: 356 ---------GFANNWIFLVITIVSSYYTTLLTS--QDVRTAWQGLIMSIIFPFLFVGLPS 404 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL +Y++ + +I + + + + Sbjct: 405 GLFLYYTTNTLIQLAVTYYTYRRYKIK 431 >gi|28378260|ref|NP_785152.1| integral membrane protein [Lactobacillus plantarum WCFS1] gi|38502980|sp|Q88WR8|OXAA2_LACPL RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|28271095|emb|CAD64000.1| integral membrane protein [Lactobacillus plantarum WCFS1] Length = 307 Score = 169 bits (427), Expect = 2e-39, Method: Composition-based stats. Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 34/255 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G+ Y ++AKP +M + L GN +G AI+ TV V+L+ P+ Q M Sbjct: 33 YGFVYEYLAKPGQNVMEWLSQLFGNNYGWAIIGLTVIVRLVLLPMMINQQRKSTYQQEKM 92 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 ++P++++++ + K + Q + ++QLY+ + I+ G C P+L+Q+P+F A+ Sbjct: 93 SAVRPQMEKIQARQKAATTQEEKAAISNELMQLYRDNGISMTGGIGCLPLLIQLPIFSAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ A F G ++ + I + L + G ++ Sbjct: 153 YYAIRYSPELSKATFMG----ISLGKSSLILAILAFLSYLAQG---------------YL 193 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M P K ++L PV+ +F S PAGL +Y+ + + +Q +I Sbjct: 194 SMIGLPEEQKKTMRLMLIMSPVMILFVSMSAPAGLGLYFFVGGLFACLQTLIINFF---R 250 Query: 564 IGLIDRLRSTFSKNY 578 + + + K+ Sbjct: 251 PRIRREVEAELKKHP 265 >gi|330718059|ref|ZP_08312659.1| membrane protein OxaA [Leuconostoc fallax KCTC 3537] Length = 279 Score = 169 bits (427), Expect = 2e-39, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 27/253 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W F+A ++ + N+G I++ T+ V+LL PL S M+ +QPK+ Sbjct: 43 WNAFVAAFTSSILGMAHWFGSNYGWGIVVFTIMVRLLILPLMVFSIGSMMKMQVVQPKLK 102 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L+ K+ Q++ LYK +NP A P+++Q+P+ A+Y+ IS S E+R Sbjct: 103 ALQAKYPGKDTESRQLMMAEQQALYKEAGVNPFASFLPLIVQMPILIALYQAISSSQELR 162 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F L DP I + + + S ++ M+ +P + Sbjct: 163 SGEFLWLA--LGNRDPYFILPILAAVFTF---------------ASSWLSMQSNPDQSGV 205 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV------IMKMHGAEIGLID 568 + PVV F+ + P+ L +YW SN Q V I + ++ Sbjct: 206 T-KFMPYIFPVVIFFSALAVPSALSLYWVVSNAFQTAQTLVYQNPFKIKREREIKLAAEK 264 Query: 569 RLRSTFSKNYNSQ 581 R++ +K S+ Sbjct: 265 RMQRKIAKAKRSR 277 >gi|254556467|ref|YP_003062884.1| integral membrane protein [Lactobacillus plantarum JDM1] gi|300767190|ref|ZP_07077102.1| membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180409|ref|YP_003924537.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|254045394|gb|ACT62187.1| integral membrane protein [Lactobacillus plantarum JDM1] gi|300495009|gb|EFK30165.1| membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045900|gb|ADN98443.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 307 Score = 169 bits (427), Expect = 2e-39, Method: Composition-based stats. Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 34/255 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G+ Y ++AKP +M + L GN +G AI+ TV V+L+ P+ Q M Sbjct: 33 YGFVYEYLAKPGQNVMEWLSQLFGNNYGWAIIGLTVIVRLVLLPMMINQQRKSTYQQEKM 92 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 ++P++++++ + K + Q + ++QLY+ + I+ G C P+L+Q+P+F A+ Sbjct: 93 SAVRPQMEKIQARQKAATTQEEKAAISNELMQLYRDNGISMTGGIGCLPLLIQLPIFSAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ A F G ++ + I + L + G ++ Sbjct: 153 YYAIRYSPELSKATFMG----ISLGKSSLILAILAFLSYLAQG---------------YL 193 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M P K ++L PV+ +F S PAGL +Y+ + + +Q +I Sbjct: 194 SMIGLPEEQKKTMRLMLIMSPVMILFVSMSAPAGLGLYFFVGGLFACLQTLIINFF---R 250 Query: 564 IGLIDRLRSTFSKNY 578 + + + K+ Sbjct: 251 PRIRREVEAELKKHP 265 >gi|163842273|ref|YP_001626678.1| inner membrane protein [Renibacterium salmoninarum ATCC 33209] gi|162955749|gb|ABY25264.1| inner membrane protein [Renibacterium salmoninarum ATCC 33209] Length = 321 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 40/265 (15%) Query: 336 WGWFYFIAKPMFMLMSY----------FYNLVGN----FGIAIMLTTVFVKLLFFPLAKK 381 + +F I P L+S F L G+ + ++I+ + ++ P+ K Sbjct: 2 FDFFGQILFPFKWLVSAIMLGFHEGLTFLGLPGDNGWTWTLSIIGLVIVIRAALIPVFVK 61 Query: 382 QYVSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 Q + M+ +QP++ +L+EK+K Q + + + LYK+H NP + C PIL+Q+ Sbjct: 62 QIKAQRGMQALQPEMKKLQEKYKGKTDQLSRQAMAQEQMALYKSHGTNPFSACLPILIQM 121 Query: 438 PVFFAIYKVISISLEMRHAPFW---GWIKDLAAADPTNIFTLF---GILPFYLPGFMHVG 491 P FF++++V+S + + D NI LP G +V Sbjct: 122 PFFFSLFQVLSGVSKANQDGQGIGVLSHTQIQQFDDANILGAPLSKAFLPQIQGGDPNVS 181 Query: 492 ------IWPIIMSLSMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFP 535 I + M S FI K P + Q M+L +P+VF +FP Sbjct: 182 VIVLSIIMILAMIASQFITQKQIMAKNMSEDAMASPFMRQQKMMLYILPLVFGIGGINFP 241 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 G++IYW+ +N+ ++ QQ +++ Sbjct: 242 IGVLIYWTTTNLWTMGQQFFVIRRM 266 >gi|147772782|emb|CAN71675.1| hypothetical protein VITISV_036218 [Vitis vinifera] Length = 623 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 115/265 (43%), Gaps = 46/265 (17%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L TV VK FPL KKQ S M+++QP+I +++++ + +Q +LY Sbjct: 179 YGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQRYAGD-QERIQLETARLY 237 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLAAADP-------T 471 K INPLAGC P L IPV+ +Y+ +S E + WI L+ + Sbjct: 238 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLSGPTTIAARQNGS 297 Query: 472 NIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-------------- 513 I LF G P + + P+++ +S +I +++ Sbjct: 298 GISWLFPFVDGHPPLGWSDTLAYLVLPMLLIVSQYISVQIMQSSQQWELLGHLKGVPKLE 357 Query: 514 ---------------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K + ++P++ + S P+GL +YW +N++S QQ + K Sbjct: 358 LETMIGLSQSNDPSLKTSQALTKFLPLMIGYFALSVPSGLSLYWFTNNILSTAQQVWLQK 417 Query: 559 MHGAEIGLI----DRLRSTFSKNYN 579 + GA+I + D + S+ Sbjct: 418 LGGAQIPVKQFSDDIEKEELSQIQK 442 >gi|38502952|sp|Q83MN6|OXAA_TROWT RecName: Full=Membrane protein oxaA Length = 310 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 43/271 (15%) Query: 330 FEMLIDW--GWFYFIAKPMFMLMSYFYNLVG----------NFGIAIMLTTVFVKLLFFP 377 F+ L D+ I + ++ +F+ L+G ++ ++I+ + ++ P Sbjct: 2 FDGLFDFLQNILLPIKWVIEQILVFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLIP 61 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPI 433 + KQ + M I P++ ++EK+K Q + + M+++Y+ NPL+ C PI Sbjct: 62 VFLKQIRAQRKMLEIAPEVRRIQEKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLPI 121 Query: 434 LLQIPVFFAIYKVI---------------SISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 +LQ+PVFF +Y+VI + ++ R + +G + L + + + L Sbjct: 122 VLQMPVFFGLYQVIESAQNAGTGVGPLNGPLGMDFRDSRIFGVVP-LHDSFSHDFYALQA 180 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM-----KMSPPPAD-----KGQAMILNWMPVVFV 528 F L + G+ IM K P A K Q ++L +P++F+ Sbjct: 181 GQAFNLITMIVAGVLTAIMIAVQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFL 240 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAV-IMK 558 SFP G++IYW+ SNV S VQQAV I + Sbjct: 241 GMGFSFPVGILIYWTASNVWSAVQQAVAIYR 271 >gi|125623022|ref|YP_001031505.1| preprotein translocase subunit [Lactococcus lactis subsp. cremoris MG1363] gi|124491830|emb|CAL96750.1| preprotein translocase subunit [Lactococcus lactis subsp. cremoris MG1363] gi|300069769|gb|ADJ59169.1| preprotein translocase subunit [Lactococcus lactis subsp. cremoris NZ9000] Length = 269 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 53/234 (22%), Positives = 107/234 (45%), Gaps = 24/234 (10%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQ 409 F + G G+ I+L T+ ++ PL Q S+ M+ IQP+I +++ K+ + Sbjct: 47 FLSFGGLTGVGIILFTIIIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKDMESRR 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 ++ + + +LY + +NP GC P+++Q+PV +A+Y+ +S ++H F + ++ A D Sbjct: 107 LMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKHGTFLWF--EIGAKD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT I + + + LS ++ MK S P + + MP+ + Sbjct: 165 PTFILPILAAIFTF---------------LSSYLMMK-SAPERNAMTTSMTYIMPIFILI 208 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI---MKMHGAEIGLIDRLRSTFSKNYNS 580 +F +G+ +YW SN + Q ++ K+ A + + + Sbjct: 209 MGVNFASGIALYWVISNAFQVFQTMLLANPYKIIAAREAKVQVEKDKVKAREKA 262 >gi|282858213|ref|ZP_06267403.1| preprotein translocase subunit YidC [Pyramidobacter piscolens W5455] gi|282583944|gb|EFB89322.1| preprotein translocase subunit YidC [Pyramidobacter piscolens W5455] Length = 308 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 23/261 (8%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 ++ +F +++ Y++ GN+G AI+ TV V+L PL KQ S M+ +QP++ L+E Sbjct: 5 LSDYLFQFLNFLYSMTGNWGWAIVALTVIVRLALHPLNAKQMRSMQQMQRLQPRLKVLQE 64 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-- 459 K+ L + + LYK + +NP +GC P+++Q+P+ ++ V+ + + Sbjct: 65 KYANDRD-TLSRETMALYKENKVNPASGCLPLIIQLPILILLFNVLRDASAQFGESTFCG 123 Query: 460 ---------------GWIKDLAAADPTNIFTLFGILPFYLPG---FMHVGIWPIIMSLSM 501 G+ D A + G P L ++ + + + Sbjct: 124 VPLAGTVLSSIAKAVGFSGDPLTAGFMDTCRAVGANPAGLSAVGVWLPITFLLLFIVFLT 183 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV-IMKMH 560 + Q K+S + A + MP+ F S P GL++YW S++ +++QQ + K+ Sbjct: 184 WYQQKLS-AQGNPQMATMNVVMPIFMGFICLSMPGGLLLYWMLSSLFAVIQQWFTVHKVA 242 Query: 561 GAEIGLIDRLRSTFSKNYNSQ 581 E ++ + + + + Sbjct: 243 KEEKPVLFKDKPREGEAPAQK 263 >gi|116510957|ref|YP_808173.1| preprotein translocase subunit YidC [Lactococcus lactis subsp. cremoris SK11] gi|116106611|gb|ABJ71751.1| Preprotein translocase subunit YidC [Lactococcus lactis subsp. cremoris SK11] Length = 269 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 53/234 (22%), Positives = 107/234 (45%), Gaps = 24/234 (10%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQ 409 F + G G+ I+L T+ ++ PL Q S+ M+ IQP+I +++ K+ + Sbjct: 47 FLSFGGLTGVGIILFTIIIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKDMESRR 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 ++ + + +LY + +NP GC P+++Q+PV +A+Y+ +S ++H F + ++ A D Sbjct: 107 LMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKHGTFLWF--EIGAKD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT I + + + LS ++ MK S P + + MP+ + Sbjct: 165 PTFILPILAAIFTF---------------LSSYLMMK-SAPERNAMTTSMTYIMPIFILI 208 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI---MKMHGAEIGLIDRLRSTFSKNYNS 580 +F +G+ +YW SN + Q ++ K+ A + + + Sbjct: 209 MGVNFASGIALYWVISNAFQVFQTMLLANPYKIIAAREAKVQVEKDKVKAREKA 262 >gi|94985665|ref|YP_605029.1| 60 kDa inner membrane insertion protein [Deinococcus geothermalis DSM 11300] gi|94555946|gb|ABF45860.1| 60 kDa inner membrane insertion protein [Deinococcus geothermalis DSM 11300] Length = 526 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 93/450 (20%), Positives = 161/450 (35%), Gaps = 66/450 (14%) Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFKIV 183 + A + NL + + N +T+ L ++ + Sbjct: 116 GVLDPAQPAQTAAPQLTQNLAQNR-----QEAVFRYTQ-NGATVTKTVVLHPRNFKVDVQ 169 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 TV G P G Q + G ++ +Y+ +++ Sbjct: 170 TTVE-GGPQTYTMLFPGLGKADNPSVKAVPVGGQPATVQGSGTLTVPNIQYAALQEKPSQ 228 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 H I + + S Sbjct: 229 IAH---------------ALIVRPQAGTTANATLTGGEQGLIAVHLSGP----------- 262 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 ++ ++ G E ++ L +P +F I+ + LM Y LVGN+G+ Sbjct: 263 SSLEVYGGKNELVHLYQSGY-LNLPGLFQP---NFFGQISLLIVKLMEGLYKLVGNWGLV 318 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLY 419 I+L T+ ++L+ +PL + Q +TA M+ +QPKI E+++K+K + +Q M QLY Sbjct: 319 IVLLTILLRLIMWPLMQAQGRTTARMQVMQPKIKEIQDKYKDKRDIESQRAMQMEMAQLY 378 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 + HN NP AGC+ L PV A++ I + W+ DLA DP I L Sbjct: 379 REHNFNP-AGCFSTFLPFPVLIALWSTIRNFEF---DSGFLWLPDLAVPDPFYILALI-- 432 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 + +++ M P + QA I ++F++ +FPAG+ Sbjct: 433 --------------YLCVNIGQLYVMTRKNPDMFRQQAFIY----IIFLYFALTFPAGVT 474 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 IY S +I I QQ +I + E I + Sbjct: 475 IYIILSTLIGIGQQILINRQVERETASIGQ 504 >gi|297622618|ref|YP_003704052.1| membrane protein insertase, YidC/Oxa1 family [Truepera radiovictrix DSM 17093] gi|297163798|gb|ADI13509.1| membrane protein insertase, YidC/Oxa1 family [Truepera radiovictrix DSM 17093] Length = 562 Score = 168 bits (425), Expect = 3e-39, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 117/271 (43%), Gaps = 34/271 (12%) Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G + + G E L +P G + +++ Y +V Sbjct: 271 AGATAGLELQAYGGPNEMVRFAQEGY-LDLPGLFRPNLLGRLSL---GIIVVLEAIYGVV 326 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G++G+AI+L T+ + L +PL Q S M+ IQPK+ EL++K+K + L + ++ Sbjct: 327 GSWGLAIILLTLLFRALVWPLISAQTKSMVGMQKIQPKMQELQKKYKND-REKLTQETMK 385 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LY+ +NP GC PIL+Q+P+F +++V + WI DL +DP + Sbjct: 386 LYQEAGVNPAGGCLPILVQMPIFIILWRVFINFEFNEG---FLWIPDLGLSDPFYLL--- 439 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF---VFALSSF 534 PI+ M Q + A KG +L ++ VF + F Sbjct: 440 ----------------PILYVAVMVGQSVV----ASKGNTQMLRQQLLISGVFVFFIFGF 479 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 PAG+ +Y S +I ++QQ +I + A Sbjct: 480 PAGVTLYLITSMLIQVLQQWLIQRNMDAAPA 510 >gi|322390329|ref|ZP_08063857.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis ATCC 903] gi|321142977|gb|EFX38427.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis ATCC 903] Length = 279 Score = 167 bits (424), Expect = 3e-39, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 26/223 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + YF A+ + F + G+ G+ I++ T+ ++ + PL + Q ST M+ IQP + Sbjct: 45 FVYFFAEAIR-----FLSFGGSIGVGIIVFTIVIRTVLLPLFQYQMNSTRKMQEIQPLLK 99 Query: 398 ELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 EL+ K+ L + M LYK + + P+L+Q+PV A+++ +S ++ Sbjct: 100 ELQAKYPGKDLDSRTKLSEEMRALYKEKGVKTSSAFLPLLIQMPVLMALFQALSRVEFLK 159 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 DL A DPT I + L + ++ P + Sbjct: 160 VG--HFLWLDLGAIDPTYILPVLAALFTFFSSWLTNKALP----------------ERNG 201 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ MPV+ F +G+ +YW SN + Q ++ Sbjct: 202 SATTMMYVMPVMIFFFALFSASGVALYWVTSNAYQVGQTYLLN 244 >gi|332687274|ref|YP_004457048.1| inner membrane protein translocase component YidC [Melissococcus plutonius ATCC 35311] gi|332371283|dbj|BAK22239.1| inner membrane protein translocase component YidC, short form OxaI-like [Melissococcus plutonius ATCC 35311] Length = 275 Score = 167 bits (424), Expect = 3e-39, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 27/243 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + + +L N GI I+ T+ ++++ PL Q S M++IQP++ Sbjct: 36 WDRYIVFYFAKAIQFL-SLNRNIGIGIVFFTIVIRVILLPLMYFQTKSMRKMQDIQPQLK 94 Query: 398 ELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +L++K+ P+ + +LY +N+NP AGC P+L+Q+P+ A+Y+ IS E++ Sbjct: 95 KLQQKYSSKDPETQRLFRDEQQRLYTENNVNPYAGCLPLLVQMPILMALYQAISRIPELK 154 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 L DP I + + + ++ MS ++ Sbjct: 155 QGN--FMWLALNKPDPYLILPILAAVFTFASTYL----------------SNMSQLESNI 196 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ +MPV+ +GL +YW+ SN Q V+ I R R Sbjct: 197 SLKIMNFFMPVMIFLMGIQLASGLSLYWTVSNAFQAGQTLVLN-----NPFKIRREREEE 251 Query: 575 SKN 577 +K Sbjct: 252 AKK 254 >gi|167770830|ref|ZP_02442883.1| hypothetical protein ANACOL_02183 [Anaerotruncus colihominis DSM 17241] gi|167666870|gb|EDS11000.1| hypothetical protein ANACOL_02183 [Anaerotruncus colihominis DSM 17241] Length = 355 Score = 167 bits (424), Expect = 4e-39, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 111/278 (39%), Gaps = 53/278 (19%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + P+ +M + ++ +G+A++L T+ V++ PL+ KQ S M+ +P+++ Sbjct: 4 IYTIFGYPLGWIMWACFKVLPIYGVALVLFTLIVRVCLVPLSIKQQKSMVKMQIFRPRME 63 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE----- 452 E+++K+ + + + + M++LY+ + NP +GC P+L+Q+P+ F +Y VI + Sbjct: 64 EIQKKYANN-REKMNEEMMKLYEEEHYNPASGCLPMLIQMPILFGLYDVIQRPITHLLRI 122 Query: 453 ---------------------MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 + I D +P L + + +G Sbjct: 123 SGPVIDQATEIAATVLNNANLAKDYSRQIRIIDAVNTNPDAFSGLGDFVSKVQTLDLSIG 182 Query: 492 IWPIIMS--------------------LSMFIQMKMSPPPADK------GQAMILNWMPV 525 + L F+ M+ + + ++ MP+ Sbjct: 183 PIDLTQQPTFALNLLILIPIFSFLTSLLVSFVSMRQTADMSGNAAAAAGMSKSMMIMMPL 242 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + PAGL +YW SN++ VQ ++ K + Sbjct: 243 MSAWISFVVPAGLGVYWIISNILMAVQTYLLNKFMNPK 280 >gi|229551109|ref|ZP_04439834.1| stage III sporulation protein [Lactobacillus rhamnosus LMS2-1] gi|229315570|gb|EEN81543.1| stage III sporulation protein [Lactobacillus rhamnosus LMS2-1] Length = 287 Score = 167 bits (424), Expect = 4e-39, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 22/244 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + NL G N G+ I+ T+ +++L FPL+ S A + I P++ Sbjct: 47 WDRYVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYLSIKSMAKQQEIAPQL 106 Query: 397 DELREKF--KQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ K + Q L+ +LY + +NP+ GC PI++Q+P A+Y+ I + + Sbjct: 107 KELQKKYSSKDTETQTKLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSL 166 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F +L+ DP I + + +L I M+ P + Sbjct: 167 QSGTFLWM--NLSQPDPLWIMQILA----------------TLFTLGTSILSMMAQPTRN 208 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +++ P + + P+ L IYW +N S+VQQ +I ++ R+ Sbjct: 209 SSSWVMMIISPAMIFVFSVTLPSALAIYWVVTNAFSMVQQLLIQNPFKIRREREEKARAE 268 Query: 574 FSKN 577 K Sbjct: 269 KEKE 272 >gi|303286693|ref|XP_003062636.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] gi|226456153|gb|EEH53455.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] Length = 483 Score = 167 bits (424), Expect = 4e-39, Method: Composition-based stats. Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 26/251 (10%) Query: 337 GWFYFIAKPMFMLMSYF------YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GW I + + N+ ++G AI++ TV VKL+ FPL KKQ + M+ Sbjct: 112 GWLGPITDFLEASLGVIDQGLEGLNVPYSYGYAILVLTVVVKLVTFPLTKKQVEGSIAMQ 171 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QP++ EL+ + P + LQ +LYK N NPLAGC P +PVF +Y+ +S + Sbjct: 172 ALQPRVKELQAMYANDP-ERLQMETARLYKEANFNPLAGCLPTFATLPVFIGLYRALSNA 230 Query: 451 L-EMRHAPFWGWIKDLAAADPT---NIFTLFGILPFYLPGFMHVGI--------WPIIMS 498 E + WI L N + F L ++ G +G P+++ Sbjct: 231 ATEGMLEDGFYWIPSLGGPTSIAARNDGSGFSWLWPFVDGAPPLGWHDTAAYLALPVLLV 290 Query: 499 LSMFIQMKMSPP-------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 +S F K+ P P+ IL ++P + F + PAGL +YW +N+ S Sbjct: 291 VSQFASQKIMTPDQGKDVDPSQASSQAILKFLPFMIGFFSLNVPAGLTLYWFANNIFSTA 350 Query: 552 QQAVIMKMHGA 562 Q + K A Sbjct: 351 QTVYLRKTTKA 361 >gi|15672111|ref|NP_266285.1| hypothetical protein L131778 [Lactococcus lactis subsp. lactis Il1403] gi|281490609|ref|YP_003352589.1| preprotein translocase subunit YidC [Lactococcus lactis subsp. lactis KF147] gi|38503175|sp|Q9CJ72|OXAA1_LACLA RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|12722977|gb|AAK04227.1|AE006251_3 hypothetical protein L131778 [Lactococcus lactis subsp. lactis Il1403] gi|281374415|gb|ABX75661.2| Preprotein translocase subunit YidC [Lactococcus lactis subsp. lactis KF147] Length = 269 Score = 167 bits (424), Expect = 4e-39, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 28/239 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQ 409 F + G G+ I+L T+ ++ PL Q S+ M+ IQP+I +++ K+ + Sbjct: 47 FLSFGGLTGVGIILFTIVIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKDMESRR 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 ++ + + +LY + +NP GC P+++Q+PV +A+Y+ +S ++H F + ++ A D Sbjct: 107 LMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKHGTFLWF--EIGAKD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT I + + + LS ++ MK S P + + MP+ + Sbjct: 165 PTFILPILAAVFTF---------------LSSYLMMK-SAPERNAMTTSMTYIMPIFILI 208 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI---MKMHGAEIGLI----DRLRSTFSKNYNSQ 581 +F AG+ +YW SN + Q ++ K+ A + D++++ ++ Sbjct: 209 MGVNFAAGIALYWVISNAFQVFQTMLLANPYKIIAAREAKVQVEKDKIKAREKALKKAR 267 >gi|257437741|ref|ZP_05613496.1| stage III sporulation protein J [Faecalibacterium prausnitzii A2-165] gi|257200048|gb|EEU98332.1| stage III sporulation protein J [Faecalibacterium prausnitzii A2-165] Length = 360 Score = 167 bits (423), Expect = 4e-39, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 117/294 (39%), Gaps = 53/294 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 Y + P+ +M + Y L+ N+G I+L T+ + ++ PL Q S A M QP + E Sbjct: 8 LYILGWPLGYVMEWIYKLIPNYGWDIILFTLLITVIKIPLQLNQQKSMARMSAFQPMVAE 67 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE------ 452 +++K++ P+ Q+ +++L + P AGC P+L+ V F + +V+ L+ Sbjct: 68 IQKKYR-DKPEKQQEELMKL-QEQGYKPTAGCMPMLVNFLVMFGVIEVVYRPLQRIFHIG 125 Query: 453 ---MRHAPFWGWIKDLA-------------------------AADPTNIFTLFG-ILPFY 483 + A ++ D T FG + F+ Sbjct: 126 ADALTAAGEALTAMGISFTTVTRDTNIIAQVISGESTVSSCFTPDQVATITEFGQHMDFF 185 Query: 484 LPGFMHVGIW------------PIIMSLSMF----IQMKMSPPPADKGQAMILNWMPVVF 527 V + P++ ++MF I MK S + + MP+++ Sbjct: 186 GIDLTRVPQYSLAAENLPLLILPVLAIVTMFLSTHISMKASGQEMQGSMKLTMYMMPLMY 245 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 VF + P+ +Y+ SN++ VQ ++ K++ E + ++ + Sbjct: 246 VFFCFTVPSAFSLYYVVSNILMTVQSLLMKKIYDPEKMKAEVAAEMAARKKEQK 299 >gi|218291090|ref|ZP_03495113.1| 60 kDa inner membrane insertion protein [Alicyclobacillus acidocaldarius LAA1] gi|218238975|gb|EED06182.1| 60 kDa inner membrane insertion protein [Alicyclobacillus acidocaldarius LAA1] Length = 342 Score = 167 bits (423), Expect = 4e-39, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 22/215 (10%) Query: 342 IAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 I + LM YF +L GN +GI+I+L + V+L+ PL +Q M +QP+I ++R Sbjct: 44 ILHGISDLMDYFAHLFGNDYGISILLMAILVRLVVLPLFLRQIRFQRAMVKLQPEIQKIR 103 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 K+K Q +Q+ +++LY+ +NPLAGC+P+L+Q+P +A Y I ++ MR + + Sbjct: 104 TKYKFDN-QKMQEELMKLYQEAGMNPLAGCFPMLIQLPFLWAFYGAIVGNVGMRQST-FL 161 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 I L D I P++ +LS + +S Q +L Sbjct: 162 GIFPLGHWDTHYIL-------------------PVLAALSTLLSSWLSMQSQPVQQKSML 202 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 P++ F P GL++YW ++N++ +Q + Sbjct: 203 FVYPLMIFFFAFRLPGGLVLYWIYTNLLVALQVYL 237 >gi|300742660|ref|ZP_07072681.1| putative 60Kd inner membrane family protein [Rothia dentocariosa M567] gi|300381845|gb|EFJ78407.1| putative 60Kd inner membrane family protein [Rothia dentocariosa M567] Length = 337 Score = 167 bits (423), Expect = 5e-39, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 102/255 (40%), Gaps = 34/255 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFG----------IAIMLTTVFVKLLFFPLAKKQYVSTA 387 + + ++ +F+ + + G + I+ T+ ++ L PL KQ + Sbjct: 2 ILWPFKLAVSAVLWFFHTIFTSIGMDPSSGFTWVLCIICLTLVMRTLTIPLFVKQIKAMR 61 Query: 388 NMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 M +Q + +L+ K+K Q + + + LYK H NP A C PI+ Q+P+FF + Sbjct: 62 GMNAMQGDLAKLQAKYKGKKDQLSRQAMAQEQMALYKKHGTNPFASCLPIIAQMPIFFGL 121 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF----------YLPGFMHVGIW 493 Y+V+ + + +FG F + I Sbjct: 122 YQVLMGISGAAAKNEGILLLPAELVKQFSEAHIFGAPIFSTMMNPGNGNHAATVAQAIIM 181 Query: 494 PIIMSLSMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 ++MS + F K P + Q M++ P++F +FP G++ YW+ Sbjct: 182 ILLMSGTQFFIQKQLSAKNMSEAAKNSPIFRQQQMMMYIFPIIFAVTGINFPLGVMYYWT 241 Query: 544 WSNVISIVQQAVIMK 558 SN ++ QQ +++ Sbjct: 242 VSNFWALGQQWWVIR 256 >gi|28572956|ref|NP_789736.1| putative inner membrane protein translocase component YidC [Tropheryma whipplei TW08/27] gi|38502953|sp|Q83N53|OXAA_TROW8 RecName: Full=Membrane protein oxaA gi|28411089|emb|CAD67474.1| conserved integral membrane protein [Tropheryma whipplei TW08/27] Length = 310 Score = 167 bits (423), Expect = 5e-39, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 43/271 (15%) Query: 330 FEMLIDW--GWFYFIAKPMFMLMSYFYNLVG----------NFGIAIMLTTVFVKLLFFP 377 F+ L D+ I + ++ +F+ L+G ++ ++I+ + ++ P Sbjct: 2 FDGLFDFLQNILLPIKWVIEQILVFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLIP 61 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPI 433 + KQ + M I P++ ++EK+K Q + + M+++Y+ NPL+ C PI Sbjct: 62 VFLKQIRAQRKMLEIAPEVRRIQEKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLPI 121 Query: 434 LLQIPVFFAIYKVI---------------SISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 +LQ+PVFF +Y+VI + ++ R + +G + L + + + L Sbjct: 122 VLQMPVFFGLYQVIESAQNAGTGVGPLNGPLGMDFRDSRIFGVVP-LHDSFSHDFYALQA 180 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM-----KMSPPPAD-----KGQAMILNWMPVVFV 528 F L + G+ IM K P A K Q ++L +P++F+ Sbjct: 181 GQAFNLITMIVAGVLTAIMIAVQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFL 240 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAV-IMK 558 SFP G++IYW+ SNV S VQQAV I + Sbjct: 241 GMGFSFPVGILIYWTASNVWSGVQQAVAIYR 271 >gi|258512905|ref|YP_003186339.1| membrane protein insertase, YidC/Oxa1 family [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479631|gb|ACV59950.1| membrane protein insertase, YidC/Oxa1 family [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 344 Score = 167 bits (423), Expect = 5e-39, Method: Composition-based stats. Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 22/215 (10%) Query: 342 IAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 I + LM YF +L GN +GI+I+ + V+L+ PL +Q M +QP+I ++R Sbjct: 44 ILHGISDLMDYFAHLFGNDYGISILFMAILVRLVVLPLFLRQIRFQRAMVKLQPEIQKIR 103 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 K+K Q +Q+ +++LY+ +NPLAGC+P+L+Q P +A Y I ++ MR + + Sbjct: 104 TKYKFDN-QKMQEELMKLYQEAGMNPLAGCFPMLIQFPFLWAFYGAIVGNIGMRQST-FL 161 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 I L D + P++ +LS + +S Q +L Sbjct: 162 GIFPLGHWDTHYVL-------------------PVLAALSTLLSSWLSMQSQPVQQKSML 202 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 PV+ F P GL++YW ++N++ +Q + Sbjct: 203 FVYPVMIFFFTFRLPGGLVLYWIYTNLLVALQVYL 237 >gi|308803795|ref|XP_003079210.1| chloroplast membrane protein (ISS) [Ostreococcus tauri] gi|116057665|emb|CAL53868.1| chloroplast membrane protein (ISS) [Ostreococcus tauri] Length = 453 Score = 167 bits (423), Expect = 5e-39, Method: Composition-based stats. Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 22/241 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGI------AIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GW ++ + L+ + + G+ AI++ T+ VK++ +PL K Q VS+ NMK Sbjct: 59 GWLAPVSNALEDLLFTIKGQLLDLGVPYPTGNAIIIVTILVKMVTYPLTKDQVVSSLNMK 118 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QP+I +REK+ + + + K + ++Y+ + +NPLAGC P LL PV +Y+ + Sbjct: 119 NLQPQIAAIREKY-EDDQERMNKEINRVYEENGVNPLAGCGPALLSFPVLAGLYRAFNN- 176 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--------WPIIMSLSMF 502 + A W + A PT+ L +LP +G +PI+ +LS F Sbjct: 177 AGIDGAFDEPWFFLPSLAGPTDARDLSWLLPLDADLAPPIGWDDASLYLLFPIMTTLSQF 236 Query: 503 IQMKMSPPPAD------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + M++ P D + Q+++L +P + + PAGL +YW W+NV + Q + Sbjct: 237 VSMEVLKPEEDEKTKEMQNQSVLLKLLPFFIGYISLTVPAGLALYWFWNNVFTTGIQVYL 296 Query: 557 M 557 Sbjct: 297 R 297 >gi|331700391|ref|YP_004336630.1| membrane protein [Pseudonocardia dioxanivorans CB1190] gi|326955080|gb|AEA28777.1| membrane protein insertase, YidC/Oxa1 family [Pseudonocardia dioxanivorans CB1190] Length = 365 Score = 167 bits (422), Expect = 5e-39, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 110/261 (42%), Gaps = 35/261 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ G + +A++ ++ + + Q S M Sbjct: 2 LNFIYYPVSAILWFWHKAFGFVFSPTSGVAWALAVVFLVFTLRAILYKPFVGQVRSMRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + QP+I +LR+K+ Q + + M +L +NP+ GC P+L+Q+PVF ++ V+ Sbjct: 62 QEFQPEIQKLRKKYANDK-QKMTQEMQRLQSEQGVNPVGGCLPVLIQVPVFIGLFHVLRE 120 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIF----------------------TLFGILPFYLPGF 487 + + +D+ + ++F T+ +L +P Sbjct: 121 FKPGKTENYIFNAEDVRSFVDADLFGAKLGASIVPLQGAPSLESLGTTVGQMLVVMIPLM 180 Query: 488 MHVGIWPIIM---SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 + G++ I S++ +++ + P + ++L P+ V P ++ YW Sbjct: 181 IMAGVFTHITARHSVARQTEVQAANPQSAIMNKLMLYVFPIGVVVGAPFLPLAILFYWVS 240 Query: 545 SNVISIVQQAVIMKMHGAEIG 565 +N+ ++ QQ ++ K AE Sbjct: 241 NNLWTLAQQRIVYKKIDAEEA 261 >gi|320095103|ref|ZP_08026812.1| membrane protein OxaA [Actinomyces sp. oral taxon 178 str. F0338] gi|319977970|gb|EFW09604.1| membrane protein OxaA [Actinomyces sp. oral taxon 178 str. F0338] Length = 447 Score = 167 bits (422), Expect = 6e-39, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 30/251 (11%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAM 415 + ++I+L T+ V++ PL KQ S+ M+ +QP+I +++EK+K Q + + Sbjct: 37 WVLSIVLLTILVRVAIVPLLLKQIRSSRAMQAVQPEIRKIQEKYKGKKDMVSRQKMTEET 96 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 LY+ H ++P A C P+L+Q+PV FA+Y+ I ++ + + ++ P T Sbjct: 97 QALYRKHKVSPFASCLPLLVQMPVLFAMYRAIYAVKDLAEGTYTYSGQAASSLGPITQTT 156 Query: 476 ---LFGILPFYLP-------------GFMHVGIWPIIMSLSMFIQMK---------MSPP 510 + G F +P + + I+M F+ M+ M Sbjct: 157 ASEINGSTVFGVPLSHTLRTETSNSSAAIVFVVAIILMVALQFVSMRLSFSRNMPDMGSN 216 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK-MHGAEIGLIDR 569 P + Q ++ MPV+FVF+ F G+++Y S+ ++ Q +K M Sbjct: 217 PMARSQRSMMYVMPVMFVFSGVFFQMGVVVYTVTSSFWALGQAYWTIKVMPTPGSPAYAD 276 Query: 570 LRSTFSKNYNS 580 LR+ K+Y Sbjct: 277 LRAKREKDYQE 287 >gi|326405712|gb|ADZ62783.1| preprotein translocase subunit YidC [Lactococcus lactis subsp. lactis CV56] Length = 269 Score = 167 bits (422), Expect = 6e-39, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 28/239 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPPQ 409 F + G G+ I+L T+ ++ PL Q S+ M+ IQP+I +++ K+ + Sbjct: 47 FLSFGGLTGVGIILFTIVIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKNMESRR 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 ++ + + +LY + +NP GC P+++Q+PV +A+Y+ +S ++H F + ++ A D Sbjct: 107 LMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKHGTFLWF--EIGAKD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT I + + + LS ++ MK S P + + MP+ + Sbjct: 165 PTFILPILAAVFTF---------------LSSYLMMK-SAPERNAMTTSMTYIMPIFILI 208 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI---MKMHGAEIGLI----DRLRSTFSKNYNSQ 581 +F AG+ +YW SN + Q ++ K+ A + D++++ ++ Sbjct: 209 MGVNFAAGIALYWVISNAFQVFQTMLLANPYKIIAAREAKVQVEKDKIKAREKALKKAR 267 >gi|322373859|ref|ZP_08048394.1| membrane protein [Streptococcus sp. C150] gi|321277231|gb|EFX54301.1| membrane protein [Streptococcus sp. C150] Length = 305 Score = 167 bits (422), Expect = 6e-39, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 110/254 (43%), Gaps = 33/254 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 GW + + +PM +++YF N +G FG+ I+ T+ V+L+ PL Q A + Sbjct: 35 GWVWNLLGRPMSHIITYFANNLGLGFGLGIVFVTIIVRLIILPLGLHQSRGAAYQAAKRE 94 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 + P ++ + E+ + + Q Q ++Q + + ++ + GC P+L+Q+P F A+Y Sbjct: 95 YLAPILEPINERLRNAETQEEKMAAQSELMQAQRENGVSLMGGVGCLPLLIQLPFFSALY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + H F F + I + ++ Sbjct: 155 YAARYTPGVLHDH-------------------FLWFNLNSRDFPLIIIIAALYYFQSWLS 195 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 ++ P K A+ + MP++ + S PA +I+YW + SI+QQ + + + Sbjct: 196 IQQVPEEQRKQMAVTMYSMPIMMIVFGISSPAAVILYWFVGGIFSIIQQLITN--YIIKP 253 Query: 565 GLIDRLRSTFSKNY 578 L +++ F+KN Sbjct: 254 RLQEKVAEEFAKNP 267 >gi|295398138|ref|ZP_06808187.1| stage III sporulation protein J [Aerococcus viridans ATCC 11563] gi|294973657|gb|EFG49435.1| stage III sporulation protein J [Aerococcus viridans ATCC 11563] Length = 277 Score = 166 bits (421), Expect = 8e-39, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 114/244 (46%), Gaps = 27/244 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I ++ + ++ GN+G+ I+ T+ ++++ PL K Q ST M+ +QP++ Sbjct: 38 WDRYIVYNFSRIIVWLSDIFGNYGVGIIAFTLIIRIILIPLTKYQTQSTEKMQMMQPELK 97 Query: 398 ELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L+EK+ P Q LQ+ +L + ++ + +GC P+L+Q+P+ A+Y+ IS + + Sbjct: 98 ALQEKYASKDPETQQKLQEETAKLNEKYDYSMWSGCLPMLIQLPILMALYQSISRTEILS 157 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPP 511 F L P +F + PII ++ + +++ P Sbjct: 158 QGHFLW----LELGVPDQLFVI-----------------PIIAAILTWYNTRLTTIGTPN 196 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 ++ AM+ MPV+ +F + P+ + +YW S +I+Q V+ D++R Sbjct: 197 SNPSMAMMQWTMPVMILFMGVTLPSAISLYWVASTGFTILQTLVMNNPFKKRDAREDQIR 256 Query: 572 STFS 575 Sbjct: 257 KEKE 260 >gi|206896386|ref|YP_002247364.1| membrane protein OxaA 1 [Coprothermobacter proteolyticus DSM 5265] gi|206739003|gb|ACI18081.1| membrane protein OxaA 1 [Coprothermobacter proteolyticus DSM 5265] Length = 221 Score = 166 bits (421), Expect = 8e-39, Method: Composition-based stats. Identities = 60/218 (27%), Positives = 111/218 (50%), Gaps = 16/218 (7%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I+ M++++ Y++V N+ + I+L T+ +KL+ PL +Q ++ + IQ ++ E+ + Sbjct: 5 ISNFFSMILNWLYSVVPNYPVDIILMTILLKLILEPLTYQQLRTSFVISRIQGELQEIAK 64 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K P Q Q ++YK H +NPL GC LLQIP+FF +Y + + + P + W Sbjct: 65 KYKNDPQQAAQ-EQSKIYKEHGVNPLIGCLLPLLQIPIFFGLYGSLVQNPNFKGLP-FLW 122 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + D++ DPT I + + + F + P + Q M++ Sbjct: 123 VPDISKPDPTWI--------------TVIAMVVVTYFQFKFTSQATTDPAMQRQQNMMMW 168 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ + SFP G+ +YW ++ISI++ +I KM Sbjct: 169 IFVIMIGWIARSFPFGVALYWMAFSLISILESFIIRKM 206 >gi|311742159|ref|ZP_07715969.1| membrane protein OxaA [Aeromicrobium marinum DSM 15272] gi|311314652|gb|EFQ84559.1| membrane protein OxaA [Aeromicrobium marinum DSM 15272] Length = 328 Score = 166 bits (421), Expect = 8e-39, Method: Composition-based stats. Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 21/223 (9%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + ++I+ TV ++ L PL KQ S+ NM+ +QPKI EL++K+ + L + ++L+ Sbjct: 43 WTLSIVGLTVTIRALLIPLFVKQIKSSRNMQLLQPKIKELQKKYGHD-RERLTQEQMKLW 101 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEM------RHAPFWGWIKDLAAADPTNI 473 K NP A C P+L Q+PVFFA+++ I + + R ++ + + I Sbjct: 102 KETGTNPFASCLPLLAQMPVFFALFRTIDQAAKAPADDLERGVRGLFNVEYVESLQGATI 161 Query: 474 FTLFGILPFYLPGFMHVGIWPII----MSLSMFIQM-----KMSPP-----PADKGQAMI 519 F F + +I M + F+ K PP P + Q M+ Sbjct: 162 FGARIADTFINTDLTQTRVLTMILVIAMCATQFLTQRQLMAKNMPPDALNGPYAQQQKML 221 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 L +P VF FP G+++YW+ SN+ ++ QQ +++ + A Sbjct: 222 LYILPPVFAIGGIFFPLGVLVYWTTSNLWTMGQQFYVIRRNPA 264 >gi|199598237|ref|ZP_03211658.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001] gi|258509936|ref|YP_003172687.1| stage III sporulation protein J [Lactobacillus rhamnosus GG] gi|199590840|gb|EDY98925.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001] gi|257149863|emb|CAR88836.1| Stage III sporulation protein J [Lactobacillus rhamnosus GG] gi|259651196|dbj|BAI43358.1| preprotein translocase subunit YidC [Lactobacillus rhamnosus GG] Length = 278 Score = 166 bits (421), Expect = 8e-39, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 22/244 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + NL G N G+ I+ T+ +++L FPL+ S A + I P++ Sbjct: 38 WDRYVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYLSIKSMAKQQEIAPQL 97 Query: 397 DELREKF--KQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ K + Q L+ +LY + +NP+ GC PI++Q+P A+Y+ I + + Sbjct: 98 KELQKKYSSKDTETQTKLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSL 157 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F +L+ DP I + + +L I M+ P + Sbjct: 158 QSGTFLWM--NLSQPDPLWIMQILA----------------TLFTLGTSILSMMAQPTRN 199 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +++ P + + P+ L IYW +N S+VQQ +I ++ R+ Sbjct: 200 SSSWVMMIISPAMIFVFSVTLPSALAIYWVVTNAFSMVQQLLIQNPFKIRREREEKARAE 259 Query: 574 FSKN 577 K Sbjct: 260 KEKE 263 >gi|322517496|ref|ZP_08070369.1| membrane protein [Streptococcus vestibularis ATCC 49124] gi|322123978|gb|EFX95537.1| membrane protein [Streptococcus vestibularis ATCC 49124] Length = 305 Score = 166 bits (420), Expect = 9e-39, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 112/254 (44%), Gaps = 33/254 (12%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 GW + + +PM +++YF +NL FG+ I+ T+ V+L+ PL Q +A + Sbjct: 35 GWVWNLLGRPMSHVITYFAHNLNLGFGLGIIFVTIIVRLIILPLGLHQSRSAAYQSAKRE 94 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 + P ++ + E+ + + Q Q ++Q + + ++ + GC P+L+Q P F A+Y Sbjct: 95 YLAPVLEPINERLRNAETQEEKMAAQSELMQAQRENGLSLMGGVGCLPLLIQFPFFSALY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + F + +L D F + I + ++ Sbjct: 155 YAARYTPGVLKDDFLWF--NLGHRD-----------------FPLIIIIAALYYFQSWLS 195 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 ++ P K A + MP++ +F S PA +I+YW + SI+QQ + + + Sbjct: 196 IQQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWFVGGIFSIIQQLITN--YIIKP 253 Query: 565 GLIDRLRSTFSKNY 578 L +++ F KN Sbjct: 254 RLKEKVAEEFKKNP 267 >gi|150021506|ref|YP_001306860.1| 60 kDa inner membrane insertion protein [Thermosipho melanesiensis BI429] gi|149794027|gb|ABR31475.1| 60 kDa inner membrane insertion protein [Thermosipho melanesiensis BI429] Length = 433 Score = 166 bits (420), Expect = 1e-38, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 118/289 (40%), Gaps = 26/289 (8%) Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + + G KFS + K ++ G + I D Sbjct: 142 KNNIFLSFYEKGDILSIIKFSGKTLGGNKVKGANLRFLVYIGPYKKTLIKSGFSDDYEVI 201 Query: 330 FEMLID----WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 EML GWF FI P+ + + NFG+ I++ T+ ++ + +PL Q S Sbjct: 202 LEMLKTISGVGGWFDFILYPLVYFFGWINDFTKNFGLTIIVFTIIIRFVLYPLYHSQTKS 261 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 M+ +QP ++++++K+K PQ Q+ +++ Y+ + INP +GC L+Q+P+F +Y+ Sbjct: 262 MIKMRKLQPIVEQIKKKYKD--PQKQQQELLKAYRENKINPASGCLMALVQLPIFIILYQ 319 Query: 446 VISISL-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 VI E + + +DL A F +L + G + ++ Sbjct: 320 VIRYYQEEFAFSGKFLIWRDLTAGG-------FSANWVFLIIQIVAGYYLALI------- 365 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 D A M +F F P+G+ +Y++ + +I + Sbjct: 366 -----TSQDTRTAWQSIIMSFIFPFLFIGLPSGVFLYYTANTLIQVGIT 409 >gi|171779011|ref|ZP_02920019.1| hypothetical protein STRINF_00894 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282369|gb|EDT47794.1| hypothetical protein STRINF_00894 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 271 Score = 166 bits (420), Expect = 1e-38, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 109/252 (43%), Gaps = 37/252 (14%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF AK + L ++ G G+ I+L T+ ++ + PL Q S M+N+Q Sbjct: 33 GWEQIVYFFAKAIQWL-----SINGRIGVGIVLFTIIIRAIMMPLYNMQIKSGQKMQNLQ 87 Query: 394 PKIDELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ +L+EK+ L + LYK + +NP A P+++Q+P+ A+Y+ ++ Sbjct: 88 PELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVVQLPILMALYQALTRV 147 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 ++ F +L+ DP I P++ +L F+ ++ Sbjct: 148 AFLKTGTFLWI--ELSQPDPYYIL-------------------PVLAALFTFLSTWLTNK 186 Query: 511 PADKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG--AEIG 565 A + ++ MP++ F +G+++YW+ SN + Q ++ AE Sbjct: 187 AAREKNFAMTLMTYVMPIIIFFFGFRLASGVVLYWTVSNAFQVFQILLLNNPFKIIAERE 246 Query: 566 LIDRLRSTFSKN 577 +R + Sbjct: 247 AKERAEKEHAAK 258 >gi|312864045|ref|ZP_07724281.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus vestibularis F0396] gi|311100458|gb|EFQ58665.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus vestibularis F0396] Length = 305 Score = 166 bits (420), Expect = 1e-38, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 112/254 (44%), Gaps = 33/254 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 GW + + +PM +++YF N +G FG+ I+ T+ V+L+ PL Q +A + Sbjct: 35 GWVWNLLGRPMSHVITYFANNLGLGFGLGIIFVTIIVRLIILPLGLHQSRSAAYQSAKRE 94 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 + P ++ + E+ + + Q Q ++Q + + ++ + GC P+L+Q P F A+Y Sbjct: 95 YLAPILEPINERLRNAKTQEEKLAAQSELMQAQRENGLSLMGGVGCLPLLIQFPFFSALY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + F + +L D F + I + ++ Sbjct: 155 YAARYTPGVLKDDFLWF--NLGHRD-----------------FPLIIIIAALYYFQSWLS 195 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 ++ P K A + MP++ +F S PA +I+YW + SI+QQ + + + Sbjct: 196 VQQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWFVGGIFSIIQQLITN--YIIKP 253 Query: 565 GLIDRLRSTFSKNY 578 L +++ F KN Sbjct: 254 RLKEKVAEEFKKNP 267 >gi|116493571|ref|YP_805306.1| preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC 25745] gi|122264965|sp|Q03D58|OXAA_PEDPA RecName: Full=Membrane protein oxaA; Flags: Precursor gi|116103721|gb|ABJ68864.1| Preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC 25745] Length = 279 Score = 166 bits (420), Expect = 1e-38, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 114/249 (45%), Gaps = 22/249 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W I + Y L G N+G I++ T+ ++++ PL Q +T +QPK+ Sbjct: 36 WDGVIVYNFSRFIIYLSKLFGGNYGWGIIVFTIIIRIIILPLMIYQTRTTMKTAELQPKL 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L++K+ Q L++ +LY +NP+AGC P+++Q+PV +A+Y +S + + Sbjct: 96 KQLQQKYSSRDAESQQKLREEQQKLYAEAGVNPMAGCLPLIIQLPVMYALYAAVSRTQVL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L+ DP I + L + +S ++ MK P + Sbjct: 156 KEGTFLWL--QLSDKDPYFILPILAALFTF---------------MSTWLSMKSQPAGSQ 198 Query: 514 KGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G + + MP+V + +FPA + +YW +N+ + Q +I + +++++ Sbjct: 199 NGMTSAMTFGMPLVILITALNFPAAITLYWVVTNLFQVGQTLIIQNPFKIQKEREEKIQT 258 Query: 573 TFSKNYNSQ 581 +K + Sbjct: 259 EKAKRKAIE 267 >gi|312897432|ref|ZP_07756856.1| putative OxaA-like protein [Megasphaera micronuciformis F0359] gi|310621493|gb|EFQ05029.1| putative OxaA-like protein [Megasphaera micronuciformis F0359] Length = 217 Score = 166 bits (420), Expect = 1e-38, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 18/226 (7%) Query: 342 IAKPMFMLMSYFYNLV-----GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 ++ M + Y Y ++GIAI++ T+ +KL+ PL KQ S M+ +QPKI Sbjct: 4 LSGIMSTFLDYCYAFTQSVGYPSYGIAIIMLTIIIKLVLSPLTAKQIRSMEGMQLLQPKI 63 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 EL++K+K + + +Q+ M +LY+ +NPL+GC PIL+Q+P +I+ + Sbjct: 64 KELQKKYKGN-QKKMQEEMSKLYREMGVNPLSGCLPILIQMPFLVSIFYALRSYPYDPAY 122 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + W+ L D T I + L +L G P + P Q Sbjct: 123 ESFLWLSSLGQPDETYILPVLSALSTFLIQKQMTGAQP------------DAEGPQAMQQ 170 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP+ + +FP+GL+IYW SNV QQ ++ ++ Sbjct: 171 KIMKVAMPLFIGWISLTFPSGLVIYWIISNVFQGAQQMIMGRLKKE 216 >gi|116630436|ref|YP_819589.1| preprotein translocase subunit YidC [Lactobacillus gasseri ATCC 33323] gi|238853336|ref|ZP_04643716.1| membrane protein OxaA 1 [Lactobacillus gasseri 202-4] gi|311111578|ref|ZP_07712975.1| membrane protein OxaA 1 [Lactobacillus gasseri MV-22] gi|116096018|gb|ABJ61170.1| Preprotein translocase subunit YidC [Lactobacillus gasseri ATCC 33323] gi|238834024|gb|EEQ26281.1| membrane protein OxaA 1 [Lactobacillus gasseri 202-4] gi|311066732|gb|EFQ47072.1| membrane protein OxaA 1 [Lactobacillus gasseri MV-22] Length = 291 Score = 166 bits (420), Expect = 1e-38, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 111/240 (46%), Gaps = 22/240 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + + +LV ++G AI++ T+ V+++ PL S A + +QP++ Sbjct: 48 WDRYIVYYISQFILWIASLVRDSYGWAIIIFTIIVRIILLPLNAISIKSMAKQQKVQPQM 107 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 D LR+K+ Q LQ+ +LYK INP GC P+L+Q+PV +A+Y+ I + ++ Sbjct: 108 DALRKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTPQL 167 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP I + + +S +I +P + Sbjct: 168 QNGRFLWM--DLGRPDPYYIMPVLAAAFTF---------------ISTYISQMSTPQSSQ 210 Query: 514 KGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G + MP++ + + + +YW SN+ +VQ ++ + L ++ ++ Sbjct: 211 NGMTKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFILQNPFKYQRELEEQKKA 270 >gi|323705845|ref|ZP_08117417.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium xylanolyticum LX-11] gi|323534841|gb|EGB24620.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium xylanolyticum LX-11] Length = 218 Score = 165 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 111/217 (51%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I + L+ + Y+ VGN+G+AI++ T+ ++++ P +Q + MK I P ++E+++ Sbjct: 4 IGMYLGQLLKFIYDFVGNYGVAIIIFTILIRVILLPFYVQQMGTMRKMKEISPLVEEIKK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + P Q + + M++LYK N+NP++GC P+LL + + + ++ ++ A + W Sbjct: 64 KYAKDP-QKMNEEMMKLYKEKNVNPMSGCLPMLLPLIILWPLFAMLRSYPAFSTAS-FLW 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 +K LA DP I PI+ ++ +I M D Q + Sbjct: 122 LKSLAEKDPYFIL-------------------PILSGVTTYISSAMI--QTDNNQKSMNL 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M ++ S PAG+ IYW SN+ IVQQ + ++ Sbjct: 161 IMSAFMIWITVSLPAGVGIYWVTSNIFQIVQQYIFLR 197 >gi|255994567|ref|ZP_05427702.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium saphenum ATCC 49989] gi|255993280|gb|EEU03369.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium saphenum ATCC 49989] Length = 240 Score = 165 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 110/245 (44%), Gaps = 24/245 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 I PM ++S+ Y+ +GN+G+ ++L T+ VKL+ FPL K Q ++T M +QPK+ + Sbjct: 5 LNLIVLPMGKILSFLYSFIGNYGVTLILLTLIVKLVTFPLYKSQMLNTLKMAELQPKMKD 64 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--------IS 450 ++ +F +L M +LYK NP GC P+L+Q+P+ F ++ ++ Sbjct: 65 IQARFGHDKA-LLGAKMQELYKEEKYNPAGGCLPMLIQMPIIFGLFSLLRDPLSYISDQQ 123 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 L + WI DL+ D + L G+ F I SLS QM Sbjct: 124 LIFAVHEPFLWIADLSHPDKWILPILAGVATF------------ISFSLSQQAQMGTGQA 171 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA---VIMKMHGAEIGLI 567 G ++ PV V SFPAGL IYW + I I + K + Sbjct: 172 NPASGMKVMKYIFPVAIVLIGRSFPAGLAIYWFFGQFIQIFISIHLNSVRKKMNQQKEKS 231 Query: 568 DRLRS 572 R++ Sbjct: 232 KRMKK 236 >gi|228476491|ref|ZP_04061181.1| membrane protein OxaA 2 [Streptococcus salivarius SK126] gi|228251912|gb|EEK10958.1| membrane protein OxaA 2 [Streptococcus salivarius SK126] Length = 305 Score = 165 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 112/254 (44%), Gaps = 33/254 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 GW + + +PM +++YF + +G FG+ I+ T+ V+L+ PL Q +A + Sbjct: 35 GWVWNLLGRPMSHVITYFADNLGLGFGLGIIFVTIIVRLIILPLGLHQSRSAAYQSAKRE 94 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 + P ++ + E+ + + Q Q ++Q + + ++ + GC P+L+Q P F A+Y Sbjct: 95 YLAPILEPINERLRNAETQEEKMAAQSELMQAQRENGLSLMGGVGCLPLLIQFPFFSALY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + F + +L D F + I + ++ Sbjct: 155 YAARYTPGVLQDNFLWF--NLGHRD-----------------FPLIIIIAALYYFQSWLS 195 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 ++ P K A + MP++ +F S PA +I+YW + SI+QQ + + + Sbjct: 196 IQQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWFVGGIFSIIQQLITN--YIIKP 253 Query: 565 GLIDRLRSTFSKNY 578 L +++ F KN Sbjct: 254 RLKEKVAEEFKKNP 267 >gi|257127031|ref|YP_003165145.1| hypothetical protein Lebu_2303 [Leptotrichia buccalis C-1013-b] gi|257050970|gb|ACV40154.1| 60 kDa inner membrane insertion protein [Leptotrichia buccalis C-1013-b] Length = 228 Score = 165 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 64/222 (28%), Positives = 115/222 (51%), Gaps = 19/222 (8%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + + ++ +VGN+GIAI++ T ++++ FPL KQ S M+++QP++++++E Sbjct: 7 LVDFVVHVLKAINGVVGNYGIAIIIVTFLMRIIVFPLTLKQEKSMKKMRDLQPELEKIKE 66 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K K +P Q LQ+ ++YK + +NPL GC P+L+Q+P+F A+Y A F Sbjct: 67 KHKDNP-QELQRRTAEIYKENGVNPLGGCLPLLIQMPIFVALYYAFIGDAIPADAKFLW- 124 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPADKGQ 516 FTL ++ G + PI+ FIQ K+ ++ Sbjct: 125 ------------FTLKQPDRLFMLGKFAFNLLPILNVGVTFIQQKIMTSATSGQETNQQM 172 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +L MP++ +F + P+G+ +Y+ S +S+VQQ I+K Sbjct: 173 QSMLYMMPLMMLFIFYNMPSGVTLYYLVSGALSLVQQYFILK 214 >gi|134103814|ref|YP_001109475.1| putative inner membrane protein translocase component YidC [Saccharopolyspora erythraea NRRL 2338] gi|291005728|ref|ZP_06563701.1| putative inner membrane protein translocase component YidC [Saccharopolyspora erythraea NRRL 2338] gi|133916437|emb|CAM06550.1| preprotein translocase YidC subunit [Saccharopolyspora erythraea NRRL 2338] Length = 336 Score = 165 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 105/259 (40%), Gaps = 33/259 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ + G + ++++ ++ L F Q S M Sbjct: 2 LDFIYYPVSAILWFWHEVFGFVLDPASGFAWALSVVFLVFTLRALLFKPFVHQVRSMKKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + P I L+EK+ Q + + M +L H NP++GC P+L+Q+PVF ++ V++ Sbjct: 62 QEFAPHIKALQEKYGDD-RQKMAQEMQKLQAEHGFNPVSGCLPMLVQVPVFIGLFHVLNG 120 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTL-----FGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + +D+A+ ++F P L F +++ + + I Sbjct: 121 FRPGAPSNYVFGAEDVASFVEADLFGAKLSNTISQAPEMLAHFQTDRTSMLLVGVPLMIA 180 Query: 505 -------------MKMSPPPADKGQAMILNWMPV----VFVFALSSF-PAGLIIYWSWSN 546 + + A Q ++N M + +F F P ++IYW +N Sbjct: 181 AAIATHFTARHGVQRQTAEAAQNPQTAVMNRMTLWLFPMFAIIGGPFLPLAILIYWLANN 240 Query: 547 VISIVQQAVIMKMHGAEIG 565 ++ QQ V+ + E Sbjct: 241 FWTLGQQRVVYRRIDREEA 259 >gi|307243391|ref|ZP_07525548.1| stage III sporulation protein J family protein [Peptostreptococcus stomatis DSM 17678] gi|306493201|gb|EFM65197.1| stage III sporulation protein J family protein [Peptostreptococcus stomatis DSM 17678] Length = 233 Score = 165 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 119/242 (49%), Gaps = 14/242 (5%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + + Y ++GN+G++I++ T+ VK++ PL KQ ST M I PK+ E++ Sbjct: 4 IASLFGIALKAIYGVIGNYGLSIIVFTIIVKMILMPLTVKQTKSTFAMSEINPKVKEIQA 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K P+ + + +LYK INPL+GC PIL+Q+P+ ++ V + + Sbjct: 64 KYKN-KPEKQNEEISKLYKESGINPLSGCLPILIQMPILMGLFYVFKDPV---THGVFAS 119 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPADKGQAMIL 520 +AAA+ ++ P Y+ + +S ++ K M+P +G ++ Sbjct: 120 KAAMAAANGNFLWIKALSKPDYI--------LAVFSGVSAYLMQKVMTPKDQIEGPMKMM 171 Query: 521 NWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 +W+ + ++ FPA L +YW SN+ S+ Q +I + +++ + ++ Sbjct: 172 SWLLAGMSLYWGFIFPAALTLYWGVSNIFSVFQYYLITRPLKSKLEQEKADKEAGKSSFK 231 Query: 580 SQ 581 + Sbjct: 232 KK 233 >gi|261884151|ref|ZP_06008190.1| putative inner membrane protein translocase component YidC [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 146 Score = 165 bits (419), Expect = 2e-38, Method: Composition-based stats. Identities = 62/140 (44%), Positives = 100/140 (71%), Gaps = 1/140 (0%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +I++GWF FIAKPMF+L+S+ +N +GN+G AI+ T+ ++++ FPL K VS +K+ Sbjct: 3 DVIEYGWFTFIAKPMFLLLSWLHNYIGNWGFAIVALTIVIRIVLFPLTYKGMVSMNKLKD 62 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + PK+ E++ K+K P + L +++LYK + NP+ GC PIL+QIP+FFAIY+V+ ++ Sbjct: 63 LAPKMKEIQAKYKGDPSK-LNAHVMELYKKNGANPMGGCLPILIQIPIFFAIYRVLLNAI 121 Query: 452 EMRHAPFWGWIKDLAAADPT 471 E++ AP+ WIKDLA + Sbjct: 122 ELKGAPWIFWIKDLAIMEQA 141 >gi|313891402|ref|ZP_07825018.1| putative stage III sporulation protein J [Dialister microaerophilus UPII 345-E] gi|313120177|gb|EFR43353.1| putative stage III sporulation protein J [Dialister microaerophilus UPII 345-E] Length = 266 Score = 165 bits (419), Expect = 2e-38, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 115/241 (47%), Gaps = 31/241 (12%) Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV-----GNFGIAIMLTTVFVKLLFF 376 D IP L+ + +A+ M + + Y + ++GIAI+ TV +K++ Sbjct: 1 MADFQIPVLSTLVGY-----LAEIMRFCLQFCYGITQDLGYPSYGIAIIALTVIIKVILL 55 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 PLA KQ S M+ +QP++ +++K+K + Q + +LY ++PL+GC P+L+Q Sbjct: 56 PLAIKQIKSMKGMQEVQPQLAAIQKKYKNDKMRQSQ-EIQRLYAEKGVSPLSGCLPLLIQ 114 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 +P AI+ + + + W++ LA DPT + P+I Sbjct: 115 MPFLIAIFYALQGFPYDPNHASFLWLESLAVPDPTYVL-------------------PVI 155 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVV-FVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++S +I K + GQ ++ + + + FP+GL+IYW SN+ +QQ + Sbjct: 156 SAVSTWIISKQTSGANVAGQQKMMMMVMPLMIGYISVKFPSGLVIYWIVSNLFQGIQQTI 215 Query: 556 I 556 + Sbjct: 216 M 216 >gi|260584254|ref|ZP_05852001.1| stage III sporulation protein J [Granulicatella elegans ATCC 700633] gi|260157772|gb|EEW92841.1| stage III sporulation protein J [Granulicatella elegans ATCC 700633] Length = 271 Score = 165 bits (418), Expect = 2e-38, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 105/226 (46%), Gaps = 27/226 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W I + + ++ GN +G+ I++ T+ +++ P+ QY +T +QP+I Sbjct: 34 WDRVIIYNLSQFIITLSHIFGNSYGLGIIVFTIITRIVLVPVMHFQYKTTRQTAILQPEI 93 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 ++LREK+ Q +L++ + LY+ +N AGC P+ +Q+PV A+Y+ IS + + Sbjct: 94 NKLREKYSARDHQTQEILREEISALYEREGVNQYAGCLPVAIQLPVMIALYQAISRTEAL 153 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F + D DP I PI++ + + ++ D Sbjct: 154 KTGSFLWFNLD--QPDPFFIL-------------------PILVVATTYATSWLTMKMQD 192 Query: 514 KGQ--AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 G ++L +P + F +FP+ L +YW N+ ++Q ++ Sbjct: 193 SGAAGKIMLFVLPAMIGFTALTFPSALSLYWVVGNIFMVIQTLIMN 238 >gi|218515055|ref|ZP_03511895.1| putative inner membrane protein translocase component YidC [Rhizobium etli 8C-3] Length = 162 Score = 165 bits (418), Expect = 2e-38, Method: Composition-based stats. Identities = 79/135 (58%), Positives = 105/135 (77%), Gaps = 1/135 (0%) Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 NMK +QPK++EL+ KF LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI Sbjct: 1 NMKRMQPKMEELKAKFGDD-RMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVI 59 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 I++EMRHAPF+GWI+DL+A DPT I LFG+LPF P F+H+G+WP+IM ++MF+QM+M Sbjct: 60 YITIEMRHAPFFGWIQDLSAPDPTTIVNLFGLLPFTAPTFLHLGVWPLIMGVTMFLQMRM 119 Query: 508 SPPPADKGQAMILNW 522 +P P D QAMI Sbjct: 120 NPTPPDPTQAMIFKL 134 >gi|271970552|ref|YP_003344748.1| Preprotein translocase subunit YidC-like protein [Streptosporangium roseum DSM 43021] gi|270513727|gb|ACZ92005.1| Preprotein translocase subunit YidC-like protein [Streptosporangium roseum DSM 43021] Length = 316 Score = 165 bits (418), Expect = 2e-38, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 111/254 (43%), Gaps = 32/254 (12%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYV 384 ++ W ++ + ++++ + + + + I+ TV ++LL FPL KQ Sbjct: 1 MELSWLNWLYTAVAQVITWIHQGYSSFLAPDSGLTWALTIITLTVLMRLLIFPLFLKQMR 60 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S+ M+ + PK+ ELR+++K Q + + ++ LY+ NPL GC PI+ Q P+F +++ Sbjct: 61 SSKKMQELAPKVQELRKRYKNDK-QRMNQEVMALYQGQGANPLGGCLPIVAQFPIFISMF 119 Query: 445 KVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI-------- 495 V+ + + D A A L + +G P+ Sbjct: 120 TVLQAMANGQLKFGMTQHLVDSARAAHIFGAPLPATFWTSSADIIKLGADPVVTKVVLAI 179 Query: 496 ---IMSLSMFI---------QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 I SL+ F+ +M P + Q +++ P+ F +FP GLI+YW Sbjct: 180 FVAISSLTTFLTVRQSVTRSMAQMPDNPMAQQQKILMYISPL-FAIFSLNFPLGLILYWV 238 Query: 544 WSNVISIVQQAVIM 557 +N+ ++ QQ Sbjct: 239 TTNLWTLGQQHWFY 252 >gi|329117329|ref|ZP_08246046.1| putative stage III sporulation protein J [Streptococcus parauberis NCFD 2020] gi|326907734|gb|EGE54648.1| putative stage III sporulation protein J [Streptococcus parauberis NCFD 2020] Length = 270 Score = 165 bits (418), Expect = 2e-38, Method: Composition-based stats. Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 29/227 (12%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF K + L + G+ G+ I+L T+ +++L PL Q S+ M+++Q Sbjct: 32 GWDQLVYFFGKSIQWL-----SFNGSIGVGIILFTLIIRILLMPLFNIQIKSSQRMQDLQ 86 Query: 394 PKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ EL+ K+ L + LYK + +NP A +P+L+Q+PV A+++ +S Sbjct: 87 PELKELQTKYAGKDTESRMALAEESQALYKRNGVNPYASIFPLLIQMPVMIALFQALSRV 146 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +R F +LA ADP I + L +L ++ ++ Sbjct: 147 PFLREGSFLWI--ELAKADPYFILPILAALFTFLSTWL----------------TNLAAK 188 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + M+ MP++ F S +G+++YW+ SN + Q ++ Sbjct: 189 EKNMVMTMMTYAMPLMIFFMGISLASGVVLYWTVSNAFQVFQLLLLN 235 >gi|315605512|ref|ZP_07880549.1| stage III sporulation protein J [Actinomyces sp. oral taxon 180 str. F0310] gi|315312779|gb|EFU60859.1| stage III sporulation protein J [Actinomyces sp. oral taxon 180 str. F0310] Length = 447 Score = 165 bits (418), Expect = 2e-38, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 119/260 (45%), Gaps = 31/260 (11%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F I + W + + +L+ + + ++I+L TV V++ PL KQ S+ M Sbjct: 9 FAWAISYLWVWI--HDLLVLLGFSSGSGVAWVLSIVLLTVLVRIAIIPLFLKQIRSSRAM 66 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYK 445 + IQP++ +++EK+K Q ++ M++ L + H ++P A C P+L+Q+PV F +Y+ Sbjct: 67 QAIQPEMRKIQEKYKGKKDQASRQKMMEETQALQRKHKVSPFASCLPMLVQMPVLFGMYR 126 Query: 446 VISISLEMRHAPF--------WGWIKDLAAADPTNIFTLFGI-------LPFYLP-GFMH 489 I + + + + + + T+FG+ F P Sbjct: 127 AIIAVSSIANGTYTYRGESTDHLGPLNASVSSEIVNSTVFGVPLSHTLRDSFDQPMAVAV 186 Query: 490 VGIWPIIMSLSMFIQMKMS---------PPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 ++M + F+ M+MS P + Q ++ MP++F+F+ F G++I Sbjct: 187 FVAAIVMMVVLQFVSMRMSFSRNMPDMGDNPMAQSQRSMMYVMPLMFIFSGVFFQMGVVI 246 Query: 541 YWSWSNVISIVQQAVIMKMH 560 Y ++V ++ Q +K+ Sbjct: 247 YTVTASVWALAQAYWTIKVM 266 >gi|329121491|ref|ZP_08250115.1| ParB/SpoJ family partitioning protein [Dialister micraerophilus DSM 19965] gi|327469406|gb|EGF14876.1| ParB/SpoJ family partitioning protein [Dialister micraerophilus DSM 19965] Length = 266 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 115/241 (47%), Gaps = 31/241 (12%) Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV-----GNFGIAIMLTTVFVKLLFF 376 D IP L+ + +A+ M + + Y + ++GIAI+ TV +K++ Sbjct: 1 MADFQIPVLSTLVGY-----LAEIMRFCLQFCYGITQDLGYPSYGIAIIALTVIIKVILL 55 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 PLA KQ S M+ +QP++ +++K+K + Q + +LY ++PL+GC P+L+Q Sbjct: 56 PLAIKQIKSMKGMQEVQPQLAAIQKKYKNDKMRQSQ-EIQRLYAEKGVSPLSGCLPLLIQ 114 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 +P AI+ + + + W++ LA DPT + P+I Sbjct: 115 MPFLIAIFYALQGFPYDPNHVSFLWLESLAVPDPTYVL-------------------PVI 155 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVV-FVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++S +I K + GQ ++ + + + FP+GL+IYW SN+ +QQ + Sbjct: 156 SAVSTWIISKQTSGANVAGQQKMMMMVMPLMIGYISVKFPSGLVIYWIVSNLFQGIQQTI 215 Query: 556 I 556 + Sbjct: 216 M 216 >gi|222151988|ref|YP_002561148.1| hypothetical protein MCCL_1745 [Macrococcus caseolyticus JCSC5402] gi|222121117|dbj|BAH18452.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 286 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 31/241 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMK 390 G+FY P+ L+ + +G N+G+AI+ T+ V+L FP K Y + M Sbjct: 30 GFFYDTFVHPLDQLIHWLGAHMGHNYGLAIIAITLIVRLALFPFMMKTYKNQSVMREKMA 89 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 I+P++ E++E+ K++ Q + M+ LYK + INPL GC P+L+Q+P+ ++ Sbjct: 90 LIKPQMTEIQERVKRARTQEEKMEANQEMMALYKENGINPLNMGCLPLLIQLPIVTGLFY 149 Query: 446 VISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 V+ E + P + W + T I + G I+ +L ++ Sbjct: 150 VLKYPTEGGITQYPNFLWFE----------LTKTDIAMTVIAG--------IVYALQAYV 191 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M+ P M++ P++ V+ + PA L +YW+ ++Q + K + + Sbjct: 192 SMQNIPEEQKAQMRMMMFISPIMIVWMSAISPAALPLYWAVGGAFLVLQTWLGNKFYKKK 251 Query: 564 I 564 + Sbjct: 252 V 252 >gi|227494185|ref|ZP_03924501.1| inner membrane insertion protein [Actinomyces coleocanis DSM 15436] gi|226831919|gb|EEH64302.1| inner membrane insertion protein [Actinomyces coleocanis DSM 15436] Length = 433 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 124/262 (47%), Gaps = 31/262 (11%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQY 383 + + + + +F+A M + L N + ++I+ T+ V+ L PL +Q Sbjct: 2 WFDTLLYPFKWFVAVIMVGIHKMLVMLGMNDGPGFAWVLSIIGLTMIVRTLLIPLFFRQI 61 Query: 384 VSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 + M+ +QP++ +L+EK+K + Q + + M+ LY+ H +P A C PIL+Q+P+ Sbjct: 62 KAARGMQLVQPELKKLQEKYKDRKDQASKQKMSEEMMALYREHGTSPFASCMPILMQMPI 121 Query: 440 FFAIYKVISISLEMRH----APFWGWIKDLAAAD--PTNIFTLFGILPFYL---PGFMHV 490 FFA+++V++ + + G + + A D +N+F F F + + Sbjct: 122 FFALFRVLASTATLAEGKYPGGSIGPLNEKLAQDIEDSNLFGAFLSDTFVTASGSARVVL 181 Query: 491 GIWPIIMSLSMF-----IQMKMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGL 538 + ++M S F + MK P P + Q +++ MP++ + F G+ Sbjct: 182 VVLILLMMGSQFFTMRQLTMKNMPESAKDPNNPMMRSQIIMMYLMPLMIGASGFYFQTGV 241 Query: 539 IIYWSWSNVISIVQQAVIMKMH 560 ++YW +N+ ++ QQ ++ Sbjct: 242 LVYWFTTNMWTMGQQFWTIERM 263 >gi|237736113|ref|ZP_04566594.1| inner membrane protein YIDC [Fusobacterium mortiferum ATCC 9817] gi|229421824|gb|EEO36871.1| inner membrane protein YIDC [Fusobacterium mortiferum ATCC 9817] Length = 206 Score = 165 bits (417), Expect = 3e-38, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 119/214 (55%), Gaps = 21/214 (9%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + L+ Y+L GNFG+AI+L T+ +K++ PL KQ S +MK +QP+I++++++++ Sbjct: 12 ISALLHLMYSLTGNFGVAIILATIVIKIILLPLTLKQDKSMKSMKVLQPEIEKIKQQYQN 71 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 P +++ + ++LY+ H +NP+ GC P+L+Q+P+ +A++ V+ + + + W++ L Sbjct: 72 DP-KMMNQKTMELYQKHKVNPMGGCLPLLIQLPILWALFGVLRDPVTVPQDSTFLWMQ-L 129 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 DP I PI+ + F+Q K+ + ++ P+ Sbjct: 130 VNPDPYYIL-------------------PILNGVVSFLQQKVMGSSDNPQMKNMMYMFPL 170 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + VF PAGL IYW S+V ++VQQ +IMK Sbjct: 171 MMVFISYKMPAGLQIYWLASSVAAVVQQYLIMKK 204 >gi|313885423|ref|ZP_07819173.1| stage III sporulation protein J [Eremococcus coleocola ACS-139-V-Col8] gi|312619153|gb|EFR30592.1| stage III sporulation protein J [Eremococcus coleocola ACS-139-V-Col8] Length = 277 Score = 165 bits (417), Expect = 3e-38, Method: Composition-based stats. Identities = 59/248 (23%), Positives = 114/248 (45%), Gaps = 24/248 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + + +L G N+ I I++ TV ++++ P+ K Q S M+ IQP++ Sbjct: 38 WDRYILYYLSQFIIWLSDLFGGNYAIGIIIFTVIIRVILLPVTKMQIESQRKMQEIQPEL 97 Query: 397 DELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ + +++Q ++ + +++N AGC P+L+Q+PV A+Y+ I + E+ Sbjct: 98 SRLKEKYPNRDAASMEMMQAEQKEIMEKNDVNQFAGCLPLLIQLPVLMALYQTIQRTTEI 157 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + L DP I + L + + ++ MK P Sbjct: 158 NQG--YFLWTSLGQRDPYFILPIIAAL---------------LTFATSYLSMKAQPEKNS 200 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 Q ++L MP++ +F S PA L +YW +N ++ Q V+ + +I + + Sbjct: 201 SMQ-IMLFTMPLMILFIGISLPAALSLYWVVTNAFTVAQTLVLN--NPYKIIAERQAKKD 257 Query: 574 FSKNYNSQ 581 K Q Sbjct: 258 AEKEKQRQ 265 >gi|297563780|ref|YP_003682754.1| membrane protein insertase, YidC/Oxa1 family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848228|gb|ADH70248.1| membrane protein insertase, YidC/Oxa1 family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 314 Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 122/277 (44%), Gaps = 38/277 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVG----------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 ++ + ++ ++ + +G++I+L TV ++LL PL KQ + Sbjct: 2 LDWLYNIVGWILVQIHSGLTYIGLDTDSGWAWGLSIVLLTVLMRLLLVPLFVKQMNTQRK 61 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M++IQPKI +LRE++K + LQ+ ++LY+ NP+ GC P+LLQ+PVFFA++ V+ Sbjct: 62 MQDIQPKILKLRERYKHDK-ERLQRESMKLYQESGTNPIMGCLPLLLQMPVFFALFSVLR 120 Query: 449 ISLEMRHAPFW---------------GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 E + + + P + L P + + Sbjct: 121 SVAEGNAQYNFTPELVESARAALIFEAPVAAQFNSTPEELLALGASDPIMAKVIIAIAC- 179 Query: 494 PIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 +IM + F+ M+ S P + Q +++ P+ F P G+++YW Sbjct: 180 -VIMGTTTFLTMRQSMKRSVSQMPDNPMMQTQKIMMYMAPL-FGLFGLMMPVGVLVYWVT 237 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 SNV ++ QQ + A + +S S N +++ Sbjct: 238 SNVWTMGQQHFLYSRQPAPGQDEAKAKSGASANGSAK 274 >gi|55820342|ref|YP_138784.1| OxaA-like protein [Streptococcus thermophilus LMG 18311] gi|116627178|ref|YP_819797.1| OxaA-like protein precursor [Streptococcus thermophilus LMD-9] gi|55736327|gb|AAV59969.1| cytochrome oxidase biogenesis (Oxa1) family protein, similar to SpoIIIJ [Streptococcus thermophilus LMG 18311] gi|116100455|gb|ABJ65601.1| Preprotein translocase subunit YidC [Streptococcus thermophilus LMD-9] gi|312277657|gb|ADQ62314.1| Preprotein translocase subunit YidC [Streptococcus thermophilus ND03] Length = 305 Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 33/254 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 GW + + +PM +++YF N +G FG+ I+ T+ V+ + PL Q +A + Sbjct: 35 GWVWNLLGRPMSHVITYFANNLGLGFGLGIIFVTIIVRSIILPLGLHQSRSAAYQSAKRE 94 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 + P ++ + E+ + + Q Q ++Q + + ++ + GC P+L+Q P F A+Y Sbjct: 95 YLAPILEPINERLRNAKTQEEKMAAQSELMQAQRENGLSLMGGIGCLPLLIQFPFFSALY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + F + +L D F + I + ++ Sbjct: 155 YAARYTPGVLKDDFLWF--NLGHRD-----------------FPLIIIIAALYYFQSWLS 195 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 ++ P K A + MP++ +F S PA +I+YW + SI+QQ + + + Sbjct: 196 IQQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWLVGGIFSIIQQLITN--YIIKP 253 Query: 565 GLIDRLRSTFSKNY 578 L +++ F KN Sbjct: 254 RLKEKVAEEFKKNP 267 >gi|300362682|ref|ZP_07058858.1| stage III sporulation protein J [Lactobacillus gasseri JV-V03] gi|300353673|gb|EFJ69545.1| stage III sporulation protein J [Lactobacillus gasseri JV-V03] Length = 291 Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats. Identities = 57/237 (24%), Positives = 109/237 (45%), Gaps = 22/237 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + + +LV ++G AI++ T+ V+++ PL S A + +QP++ Sbjct: 48 WDRYIVYYISQFILWIASLVRDSYGWAIIIFTIIVRIILLPLNAISIKSMAKQQKVQPQM 107 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 D LR+K+ Q LQ+ +LYK INP GC P+L+Q+PV +A+Y+ I + ++ Sbjct: 108 DALRKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTPQL 167 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP I + + +S +I +P + Sbjct: 168 QNGRFLWM--DLGRPDPYYIMPVLAAAFTF---------------ISTYISQMSTPQSSQ 210 Query: 514 KGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 G + MP++ + + + +YW SN+ +VQ ++ + L ++ Sbjct: 211 NGMTKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFILQNPFKYQRELEEQ 267 >gi|303233448|ref|ZP_07320116.1| membrane protein insertase, YidC/Oxa1 family [Atopobium vaginae PB189-T1-4] gi|302480456|gb|EFL43548.1| membrane protein insertase, YidC/Oxa1 family [Atopobium vaginae PB189-T1-4] Length = 253 Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 117/232 (50%), Gaps = 10/232 (4%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W FI + ++ G++G+A+++ T+ ++++ PL K S+A M+ +QP++ Sbjct: 2 WDIFITL-LTQVLEGIEQFCGDWGLAVIILTLIIRVILIPLMTKSTESSARMQALQPQMQ 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +++K+ P + + + M + Y H N L GC P++LQ+PVFF ++ V S + +A Sbjct: 61 AIKDKYSDDPAR-MNEEMQKFYSEHKFNMLGGCLPMVLQMPVFFGLFTVASKIPQ--NAS 117 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F+ + ++ + P ++F GI + F+ V ++ + + M + +K + Sbjct: 118 FFSLLPTISLS-PADVFQQQGIQTAAIYIFLVV-LFAVTTFIPMVMNLKNTSEQQRSQTI 175 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV----IMKMHGAEIG 565 + M ++ + P +++Y++ S++ IVQQ + +MK E Sbjct: 176 TMGVVMSCFMLWFGWTVPTAVLLYYNTSSLWQIVQQKLVTDRVMKRVKEETE 227 >gi|55822232|ref|YP_140673.1| OxaA-like protein precursor [Streptococcus thermophilus CNRZ1066] gi|55738217|gb|AAV61858.1| hypothetical protein, SpoIIIJ family protein [Streptococcus thermophilus CNRZ1066] Length = 305 Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 33/254 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 GW + + +PM +++YF N +G FG+ I+ T+ V+ + PL Q +A + Sbjct: 35 GWVWNLLGRPMSHVITYFANNLGLGFGLGIIFVTIIVRSIILPLGLHQSRSAAYQSAKRE 94 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 + P ++ + E+ + + Q Q ++Q + + ++ + GC P+L+Q P F A+Y Sbjct: 95 YLAPILEPINERLRNAKTQEEKMAAQSELMQAQRENGLSLMGGIGCLPLLIQFPFFSALY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + F + +L D F + I + ++ Sbjct: 155 YAARYTPGVLKDDFLWF--NLGHRD-----------------FPLIIIIAALYYFQSWLS 195 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 ++ P K A + MP++ +F S PA +I+YW + SI+QQ + + + Sbjct: 196 IQQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWLVGGIFSIIQQLITN--YIIKP 253 Query: 565 GLIDRLRSTFSKNY 578 L +++ F KN Sbjct: 254 RLKEKVAEEFKKNP 267 >gi|167759573|ref|ZP_02431700.1| hypothetical protein CLOSCI_01930 [Clostridium scindens ATCC 35704] gi|167662800|gb|EDS06930.1| hypothetical protein CLOSCI_01930 [Clostridium scindens ATCC 35704] Length = 360 Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 118/277 (42%), Gaps = 31/277 (11%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNF--------GIAIMLTTVFVKLLFFPLAKKQYVST 386 +W I + +M++ Y ++ + G++I++ T+ V PL KQ + Sbjct: 15 NWPIVGQICWLLGKVMNFIYTILDSILPSDSGLVGLSIIIYTILVYTCMMPLTIKQQRTA 74 Query: 387 ANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 + P++ +++K+K Q Q+ M Q+Y + + GC P+L+Q+P FA Sbjct: 75 KMSSVMNPELQAIQKKYKNKRDQASMLKQQEEMQQVYDKYGTSMTGGCLPLLIQMPFLFA 134 Query: 443 IYKVI----SISLEMRHAP----FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Y VI + +++AP + I +L + I + + P Sbjct: 135 LYPVIYDIQTYVPAIKNAPDAVNRFITIPNLTVSPTVMIKNSGDYGLPAAVIIVTAILLP 194 Query: 495 IIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 II L+ ++ +++S P + MP+ +F + + P G+ +YW Sbjct: 195 IISGLTQYLSIRLSQSISGQQLDKDNPMAGTMKTMNMTMPLFSIFMVFTLPTGIGLYWII 254 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 S V+ VQQ +I K H +++ + D + K + Sbjct: 255 SAVVRCVQQLMINK-HLSKMSVDDLIEKNREKAAKKR 290 >gi|303240053|ref|ZP_07326574.1| membrane protein insertase, YidC/Oxa1 family [Acetivibrio cellulolyticus CD2] gi|302592322|gb|EFL62049.1| membrane protein insertase, YidC/Oxa1 family [Acetivibrio cellulolyticus CD2] Length = 285 Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats. Identities = 71/283 (25%), Positives = 126/283 (44%), Gaps = 52/283 (18%) Query: 338 WFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 F +I K + +++++ Y G +G+AI++ TVF+KL+ PL KQ+ S A ++ IQP Sbjct: 4 IFSYIPKFLGLILNFIYEHMSFGRYGLAIIIFTVFIKLVLLPLTVKQFKSNAQLQEIQPL 63 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I EL+ K+K + L + M+++Y H NP +GC P+L+Q+P+ F++ VI L Sbjct: 64 IQELQRKYKNDNNK-LNEEMMKVYAEHKYNPASGCLPLLVQLPILFSLIYVIGQPLTYML 122 Query: 456 APFWGWIKDLAAADP-----------------TNIFTL------FGILPFYLPG------ 486 I +L A P NI + G++P + P Sbjct: 123 NYSTADINNLLNAVPEAMKIKGFYAQIGAVNFHNILNMKFLGLDLGLVPTWRPNVLFGPE 182 Query: 487 ---FMHVGIWPIIMSLSMFIQMKMSPPPADK-----------------GQAMILNWMPVV 526 ++ + + PI+ ++ F+ K+ K + P++ Sbjct: 183 MGRYLPLILIPILSVITTFLSNKLMTAATMKKNNNSSGNDSAQDAAAAMTKNMTLIAPIM 242 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 ++ FPAGL +YW N+ I QQ + K + + D+ Sbjct: 243 TLWVSFQFPAGLGLYWLVGNIFQIFQQLYLNKYVINKKEVKDK 285 >gi|50913585|ref|YP_059557.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10394] gi|73921525|sp|Q5XDY9|OXAA1_STRP6 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|50902659|gb|AAT86374.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10394] Length = 275 Score = 164 bits (415), Expect = 4e-38, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 103/224 (45%), Gaps = 23/224 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW + + + + G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ Sbjct: 38 GWDQ-LVYLFARAIQWL-SFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPEL 95 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ Q L + LYK + +NP A P+L+Q+PV A+++ ++ + Sbjct: 96 RELQKKYAGKDTQTRMKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +LA D + + + +L ++ ++ + Sbjct: 156 KTGT--FLWVELAQHDHLYLLPVLAAVFTFLSTWL----------------TNLATKEKN 197 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +++ MP++ F + +G+++YW+ SN +VQ ++ Sbjct: 198 VMMTVMIYVMPLMIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 241 >gi|227514115|ref|ZP_03944164.1| inner membrane insertion protein [Lactobacillus fermentum ATCC 14931] gi|227087486|gb|EEI22798.1| inner membrane insertion protein [Lactobacillus fermentum ATCC 14931] Length = 277 Score = 164 bits (415), Expect = 4e-38, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 99/223 (44%), Gaps = 21/223 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N+ G +G+ I++ T+ ++++ PL Q S + + P++ Sbjct: 37 WDHYIVYNCSRFIIWLSNIFGGYGMGIIIFTIIIRIIILPLMFYQTKSMMKTQELAPQLK 96 Query: 398 ELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++K+ + +Q+ +LYK +NP A P+L+Q+PV +A+Y+ I + +++ Sbjct: 97 ALQKKYSSKDRETMQQLQIEQQKLYKEAGVNPFASMLPLLIQLPVMWALYQAIWRTAQLK 156 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F L DP + + + ++ ++ + S P + Sbjct: 157 TGTFLWL--QLGHTDPYFVLPILAAVFTFISSWLSMA----------------SMPEKNS 198 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + MP++ F F A + +YW +N +VQ VI Sbjct: 199 MTTTMTWVMPIMIFFMALQFSAAITLYWVVTNAFQVVQTLVIQ 241 >gi|312200977|ref|YP_004021038.1| membrane protein insertase, YidC/Oxa1 family [Frankia sp. EuI1c] gi|311232313|gb|ADP85168.1| membrane protein insertase, YidC/Oxa1 family [Frankia sp. EuI1c] Length = 434 Score = 164 bits (415), Expect = 4e-38, Method: Composition-based stats. Identities = 63/251 (25%), Positives = 109/251 (43%), Gaps = 35/251 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +F+ P+F S+F + ++ L V V++L FPL KQ S M+ +QP+I Sbjct: 15 FFHKGFGPIFGENSFFA-----WAFSVALLVVCVRILIFPLFVKQVKSQRTMQLMQPRIK 69 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+REK+ Q + + M++L K H NPL GC PI LQIP+F +++ V + + Sbjct: 70 EIREKYGHDKQQ-MNQKMMELQKEHG-NPLLGCLPIFLQIPLFISLFHVFTHMAPVTKNG 127 Query: 458 FWGWIKDLAAAD----------------PTNIFTLFGILPFYLPGFMHVGIWPI----IM 497 W+ + + TN + +L +H+ I + +M Sbjct: 128 KLEWVDRVGLSGATIEKIAKAKIWGISLSTNFNSSKALLNELHADSVHIKIVCVVLILLM 187 Query: 498 SLSMFIQMKMSP--------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 + + F + P Q ++L P+ FP ++IYW +N+ S Sbjct: 188 AATTFFTQRQIMARTGGTVDPQQAIVQKIMLYGSPITLAVFGFRFPVAVLIYWLVTNLWS 247 Query: 550 IVQQAVIMKMH 560 + QQ ++K Sbjct: 248 MGQQFFVIKRM 258 >gi|94993599|ref|YP_601697.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10750] gi|94547107|gb|ABF37153.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10750] Length = 275 Score = 164 bits (415), Expect = 4e-38, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 103/224 (45%), Gaps = 23/224 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW + + + + G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ Sbjct: 38 GWDQ-LVYLFARAIQWL-SFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPEL 95 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ Q L + LYK + +NP A P+L+Q+PV A+++ ++ + Sbjct: 96 RELQKKYAGKDTQTRMKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +LA D + + + +L ++ ++ + Sbjct: 156 KTGT--FLWVELAQHDHLYLLPVLAAVFTFLSTWL----------------TNLAAKEKN 197 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +++ MP++ F + +G+++YW+ SN +VQ ++ Sbjct: 198 VMMTVMIYVMPLMIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 241 >gi|19745380|ref|NP_606516.1| hypothetical protein spyM18_0229 [Streptococcus pyogenes MGAS8232] gi|71902868|ref|YP_279671.1| hypothetical protein M28_Spy0202 [Streptococcus pyogenes MGAS6180] gi|94987840|ref|YP_595941.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS9429] gi|94989717|ref|YP_597817.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10270] gi|94991720|ref|YP_599819.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS2096] gi|38503059|sp|Q8P2P8|OXAA1_STRP8 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|19747487|gb|AAL97015.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gi|71801963|gb|AAX71316.1| conserved hypothetical protein [Streptococcus pyogenes MGAS6180] gi|94541348|gb|ABF31397.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS9429] gi|94543225|gb|ABF33273.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10270] gi|94545228|gb|ABF35275.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS2096] Length = 275 Score = 164 bits (415), Expect = 4e-38, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 103/224 (45%), Gaps = 23/224 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW + + + + G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ Sbjct: 38 GWDQ-LVYLFARAIQWL-SFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPEL 95 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ Q L + LYK + +NP A P+L+Q+PV A+++ ++ + Sbjct: 96 RELQKKYAGKDTQTRMKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +LA D + + + +L ++ ++ + Sbjct: 156 KTGT--FLWVELAQHDHLYLLPVLAAVFTFLSTWL----------------TNLAAKEKN 197 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +++ MP++ F + +G+++YW+ SN +VQ ++ Sbjct: 198 VMMTVMIYVMPLMIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 241 >gi|229816993|ref|ZP_04447275.1| hypothetical protein BIFANG_02248 [Bifidobacterium angulatum DSM 20098] gi|229785738|gb|EEP21852.1| hypothetical protein BIFANG_02248 [Bifidobacterium angulatum DSM 20098] Length = 347 Score = 164 bits (415), Expect = 4e-38, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 113/265 (42%), Gaps = 45/265 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-------------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WGW Y + P+ LM+ + ++ ++I+ + V++ FPL K Sbjct: 14 WGWLYKLLYPVEWLMTQIMAVFHKFLVMLGMNEIGFSWVLSIVFLVIVVQICVFPLFYKS 73 Query: 383 YVSTANMK----NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGC---W 431 M+ +QPK+ ++ K+K + + +Q+ ++LY+ NP+ GC Sbjct: 74 IKGMRKMQADMQVLQPKLKRIQNKYKGKNDPASKEAMQRETMKLYQDTGTNPMGGCTSML 133 Query: 432 PILLQIPVFFAIYKVISISLEMRHA----PFWGWIKDLAAADPTNIFTLFGI------LP 481 P+ +Q PVF ++ +S + D+A A T+FG+ Sbjct: 134 PMFVQGPVFMCMFYTLSAIPYIARGKFRDGQGLGAFDIATAKEFTSTTVFGVNVADNFTT 193 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPP-----------PADKGQAMILNWMPVVFVFA 530 + G + +GI+ +M +++ S A+ Q M+L P++++F+ Sbjct: 194 ATVSGKIVIGIFVALMCFCLWLMQFNSMKRNMPQNNAQNKQAEMMQKMMLWVFPIMYIFS 253 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAV 555 + P +++YW +NV ++++ Sbjct: 254 GIAMPFAVLVYWLTNNVCNLLRSVW 278 >gi|269122891|ref|YP_003305468.1| 60 kDa inner membrane insertion protein [Streptobacillus moniliformis DSM 12112] gi|268314217|gb|ACZ00591.1| 60 kDa inner membrane insertion protein [Streptobacillus moniliformis DSM 12112] Length = 224 Score = 164 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 67/224 (29%), Positives = 117/224 (52%), Gaps = 21/224 (9%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 ++ L+ Y VGN+GIAI++TT V+LL PL KQ S M+ IQP ++ ++ Sbjct: 10 WLVDAAVKLLDLIYGFVGNYGIAIIVTTFLVRLLLLPLTLKQEKSMKRMREIQPMLEAIK 69 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K Q+ + ++LY+ +NP GC P+L+Q+PVF A+Y + + +A F Sbjct: 70 EKYKDDK-QMQNQKTMELYQQEKVNPAGGCLPLLIQLPVFVALYHAFTTNALPENATFLW 128 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-------SPPPAD 513 + +L+ D +FTL G + I P++ ++ FIQ K+ S P Sbjct: 129 F--NLSKPD--ALFTLQG---------FSINILPLLTTVLTFIQQKLMQAKTQGSNDPMA 175 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ MP++ + P+GL +Y+ + ++S++QQ +M Sbjct: 176 GSMQTMMYTMPILMLLIFYKMPSGLNLYYFVNTLLSVLQQVYVM 219 >gi|195978754|ref|YP_002123998.1| OxaA-like protein precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975459|gb|ACG62985.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 306 Score = 164 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 105/252 (41%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + ++ KP+ L+ YF N +G+AI++ T+ V+ + PL Q + M + Sbjct: 37 IWDYLGKPVSFLIDYFANSTALGYGLAIIVVTIIVRTIILPLGLYQSWKASYQSEKMAYL 96 Query: 393 QPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + ++ K + Q ++ + + +NPL G C P+L+Q+P F A+Y Sbjct: 97 KPFFEPINQRIKNATSTEEKMAAQTELMAAQRENGVNPLGGIGCLPLLIQMPFFSAMYVA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + F G DL + + + + ++ M Sbjct: 157 VQFTKGVSTSTFMGI--DLGHR-----------------SVLLTAVIAALYFVQSWLSMM 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 P + +L MP++ + PAGL +YW SI+QQ + + + L Sbjct: 198 AVPEEQREQMKAMLYTMPIMMIVMSFYLPAGLGLYWLVGGFFSIIQQLITT--YLLKPRL 255 Query: 567 IDRLRSTFSKNY 578 ++ F+KN Sbjct: 256 RKQIAEEFAKNP 267 >gi|15674429|ref|NP_268603.1| hypothetical protein SPy_0247 [Streptococcus pyogenes M1 GAS] gi|21909712|ref|NP_663980.1| hypothetical protein SpyM3_0176 [Streptococcus pyogenes MGAS315] gi|28895093|ref|NP_801443.1| hypothetical protein SPs0181 [Streptococcus pyogenes SSI-1] gi|54038807|sp|P65632|OXAA1_STRP3 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|54041695|sp|P65631|OXAA1_STRP1 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|13621523|gb|AAK33324.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|21903896|gb|AAM78783.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|28810338|dbj|BAC63276.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] Length = 275 Score = 164 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 102/224 (45%), Gaps = 23/224 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW + + + + G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ Sbjct: 38 GWDQ-LVYLFARAIQWL-SFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPEL 95 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ Q L + LYK + +NP A P+L+Q+PV A+++ ++ + Sbjct: 96 RELQRKYAGKDTQTRMKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +LA D + + + +L ++ ++ + Sbjct: 156 KTGT--FLWVELAQHDHLYLLPVLAAVFTFLSTWL----------------TNLAAKEKN 197 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +++ MP++ F + +G+++YW+ SN +VQ ++ Sbjct: 198 VMMTVMIYVMPLMIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 241 >gi|226315530|ref|YP_002775426.1| membrane protein OxaA precursor [Brevibacillus brevis NBRC 100599] gi|226098480|dbj|BAH46922.1| membrane protein OxaA precursor [Brevibacillus brevis NBRC 100599] Length = 252 Score = 164 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 25/228 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + P+ L+ L+GN +G+ I++ T+ ++++ PL KQ S+ M+ IQP++ Sbjct: 37 WDKYFVYPLSWLIKESALLLGNNYGLGILVATIIIRIIVLPLMVKQIKSSKKMQEIQPEM 96 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++REK+K P Q Q + +++ +NPLAGC P+L+Q+P+ A Y I + E+ Sbjct: 97 QKIREKYKNDP-QKAQAETMAMFQKSGVNPLAGCLPMLVQMPILIAFYHAIIRTSEIN-- 153 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 L DP I PII +++ ++Q KM Sbjct: 154 SQTFMWLTLGQKDPYYIL-------------------PIIAAITTYLQSKMMGQANQGNP 194 Query: 517 AMILNWMPVVFVF--ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 M + + + + + P+ L +YW + N+ +IVQ + + G Sbjct: 195 QMQMMIIMMPLMILAIAVTLPSALSLYWVYGNLFTIVQTYFLYRDKGK 242 >gi|225871157|ref|YP_002747104.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. equi 4047] gi|225700561|emb|CAW95058.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. equi 4047] Length = 306 Score = 164 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 105/252 (41%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + ++ KP+ L+ YF N +G+AI++ T+ V+ + PL Q + M + Sbjct: 37 IWDYLGKPVSFLIDYFANSTALGYGLAIIVVTIIVRTIILPLGLYQSWKASYQSEKMAYL 96 Query: 393 QPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + ++ K + Q ++ + + +NPL G C P+L+Q+P F A+Y Sbjct: 97 KPFFEPINQRIKNATSTEEKMAAQTELMAAQRENGVNPLGGIGCLPLLIQMPFFSAMYVA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + F G DL + + + + ++ M Sbjct: 157 VQFTKGVSTSTFMGI--DLGHR-----------------SVLLTAVIAALYFVQSWLSMM 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 P + +L MP++ + PAGL +YW SI+QQ + + + L Sbjct: 198 AVPEEQREQMKAMLYTMPIMMIVMSFYLPAGLGLYWLVGGFFSIIQQLITT--YLLKPRL 255 Query: 567 IDRLRSTFSKNY 578 ++ F+KN Sbjct: 256 RKQIAEEFAKNP 267 >gi|291517735|emb|CBK71351.1| Preprotein translocase subunit YidC [Bifidobacterium longum subsp. longum F8] Length = 305 Score = 164 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 50/231 (21%), Positives = 105/231 (45%), Gaps = 22/231 (9%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F M + ++ +AI++ + V+ FPL KQ S M+ + PK+ ++ K+K Sbjct: 7 FFAMLGMSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKMQALAPKMQRIQNKYKGK 66 Query: 407 PPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GW 461 Q + + ++LY+ +++NP C P+L+Q PVF +++ +S + + Sbjct: 67 TDQASREAMSRETMKLYQDNDVNPAGSCLPMLIQGPVFMSMFYTLSAIPYIANGKRDALG 126 Query: 462 IKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIMSLSMFIQMKMSP----- 509 D+A A +FGI+ G + +GI+ +M ++ + Sbjct: 127 AFDVATAKQFTQTDVFGIVSVTDNFTRASTAGKVVIGIFVFLMCFCLWFMQYFNMKRNMP 186 Query: 510 -----PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 A+ Q +L PV+++F+ ++ P +++YW +NV ++ + Sbjct: 187 AASMNKQAETMQKAMLWLFPVMYIFSGATMPFAVLVYWLTNNVCNLCRTLW 237 >gi|229542318|ref|ZP_04431378.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1] gi|229326738|gb|EEN92413.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1] Length = 262 Score = 164 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 35/232 (15%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L+ +G ++G++I+L T+ ++L PL Q S M+ +QP+I Sbjct: 36 WNQYIVYPLSWLIIKAAQFLGGSYGLSIILITIIIRLAILPLNITQLKSAKAMQALQPEI 95 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ Q LQ+ M++LY+ ++INP AGC PIL+Q+P+ Y I+ + + Sbjct: 96 KKLQEKYASKDAVTRQKLQQEMMKLYQEYHINPAAGCLPILIQMPILIGFYHAINRTPAI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---- 509 R + F + DL + D +I ++ F+Q K+ Sbjct: 156 RESAFLWF--DLGSVDYV---------------------LAVIAGITTFLQQKVMMSGGN 192 Query: 510 ---PPADKGQA-MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P K Q M+L +MP++ + P+ L +YW N+ IVQ I Sbjct: 193 YDANPQMKMQMNMMLWFMPIMIIVIGVGLPSALPLYWIVGNIFMIVQSYFIK 244 >gi|159897293|ref|YP_001543540.1| 60 kDa inner membrane insertion protein [Herpetosiphon aurantiacus ATCC 23779] gi|159890332|gb|ABX03412.1| 60 kDa inner membrane insertion protein [Herpetosiphon aurantiacus ATCC 23779] Length = 311 Score = 164 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 9/219 (4%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ + + ++L GN G AI+ T+ V+L PL KQ S + IQPK+ EL+ Sbjct: 3 FLGPIFLPFLEWLFHLFGNLGWAIIAFTILVRLGMLPLTLKQLRSQRKIMVIQPKLRELQ 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--- 457 K+ + + L + ++LY+ H NP+ GC P+L+ +P+ F +++ I + A Sbjct: 63 RKYSKD-REKLTQETMKLYREHGANPVGGCLPLLISLPILFGVWQAIQLFGTSVPATAEQ 121 Query: 458 -FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + W+ L N+ P+++ + + + ++ + M+ +P P Sbjct: 122 VQFLWLPRLTPLIENNVTVNSAHDPYFILPILAIA----LQFITTLMAMQRNPDPQQASM 177 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ +MP +F F FPAG +Y ++I +VQQ Sbjct: 178 NKVMMFMPFIFGFIYFQFPAGATLYSVTGSLIQLVQQYF 216 >gi|220913496|ref|YP_002488805.1| hypothetical protein Achl_2751 [Arthrobacter chlorophenolicus A6] gi|219860374|gb|ACL40716.1| 60 kDa inner membrane insertion protein [Arthrobacter chlorophenolicus A6] Length = 266 Score = 164 bits (414), Expect = 6e-38, Method: Composition-based stats. Identities = 56/249 (22%), Positives = 107/249 (42%), Gaps = 37/249 (14%) Query: 346 MFMLMSYFYNLVG----------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 M ++ F+N + + +AI+ + V+ P+ Q + M+ +QP Sbjct: 19 MSAVLVAFHNGLAALGLPSDGGWTWTLAIIGLVLVVRAALIPVFLAQVRAQRRMRQLQPD 78 Query: 396 IDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + L+EK+ Q + + + LY+ H NP + C P+L+Q P F +++V++ Sbjct: 79 LKALQEKYAGRTDQQSRQAMAQEQMALYRKHGTNPFSACLPLLIQAPFFLGLFQVLAGIP 138 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP-----------IIMSLS 500 + A A+ N T+FG +H G P ++M+ Sbjct: 139 DAVGRGTGIGAMAAAQAEQFNSATIFGAP--LSASLLHGGGDPAAVAVLALAMILVMTAC 196 Query: 501 MFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 F+ K+ P P + Q IL +P+VF + FP G+++YW+ SN+ ++ Sbjct: 197 QFLTQKLVTARTALGPDVPAPLLRQQRAILVALPLVFAAGGAFFPIGVLVYWTVSNLWTL 256 Query: 551 VQQAVIMKM 559 QQ ++ + Sbjct: 257 GQQYLVTRK 265 >gi|30684018|ref|NP_850125.1| ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] gi|330253079|gb|AEC08173.1| inner membrane protein ALBINO3 [Arabidopsis thaliana] Length = 348 Score = 164 bits (414), Expect = 6e-38, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 24/232 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M +++ + + +G AI+L T+ VK +PL K+Q ST M+ Sbjct: 111 GWFGFISDAMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQ 170 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QPKI +++++ + + +Q +LYK +NPLAGC P L IPV+ +Y+ +S Sbjct: 171 NLQPKIKAIQQRYAGN-QERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNV 229 Query: 451 L-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGIW--------PIIMS 498 E + WI L + + P G +G + P+++ Sbjct: 230 ANEGLFTEGFFWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLI 289 Query: 499 LSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWS 545 S ++ M++ PP D Q ++ ++P++ + S P+GL IYW S Sbjct: 290 ASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWLVS 341 >gi|225867929|ref|YP_002743877.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. zooepidemicus] gi|225701205|emb|CAW98134.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. zooepidemicus] Length = 306 Score = 163 bits (413), Expect = 6e-38, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 105/252 (41%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + ++ KP+ L+ YF N +G+AI++ T+ V+ + PL Q + M + Sbjct: 37 IWDYLGKPVSFLIDYFANSTALGYGLAIIVVTIIVRTIILPLGLYQSWKASYQSEKMAYL 96 Query: 393 QPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + ++ K + Q ++ + + +NPL G C P+L+Q+P F A+Y Sbjct: 97 KPFFEPINQRIKNATSTEEKMAAQTELMAAQRENGVNPLGGIGCLPLLIQMPFFSAMYVA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + F G DL + + + + ++ M Sbjct: 157 VQFTKGVSTSTFMGI--DLGHR-----------------SVLLTAVIAALYFVQSWLSMM 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 P + +L MP++ + PAGL +YW SI+QQ + + + L Sbjct: 198 AVPEEQREQMKAMLYTMPIMMIVMSFYLPAGLGLYWLVGGFFSIIQQLITT--YLLKPRL 255 Query: 567 IDRLRSTFSKNY 578 ++ F+KN Sbjct: 256 RKQIAEEFAKNP 267 >gi|308234064|ref|ZP_07664801.1| membrane protein insertase, YidC/Oxa1 family [Atopobium vaginae DSM 15829] gi|328943461|ref|ZP_08240926.1| inner membrane protein OxaA [Atopobium vaginae DSM 15829] gi|327491430|gb|EGF23204.1| inner membrane protein OxaA [Atopobium vaginae DSM 15829] Length = 252 Score = 163 bits (413), Expect = 6e-38, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 113/244 (46%), Gaps = 12/244 (4%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +FI + ++ +L G++G+A+++ T+ +++L PL K S+A M+ +QPK+ Sbjct: 2 WDWFIGI-LTQILELLQSLCGDWGLAVIILTLIIRVLLIPLMTKSTESSAQMQVLQPKMQ 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+++K+ P + + + M + Y H N L GC P LLQ+P+FF ++ V S + Sbjct: 61 EIKDKYADDPAR-MNEEMQKFYSEHKFNMLGGCLPTLLQMPIFFGLFTVASKIPQDASFF 119 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 L+ L G + L V + ++ + M I S Sbjct: 120 NILPSISLSPQTVFEQQGLSGAAIYILL----VITFGVMTFIPMVITSSASSSQQRSQTI 175 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 + M V ++ + P +++Y++ S+V I+QQ ++ ++ R++ + Sbjct: 176 TMGAVMSVFMLWFGWTVPTAVLLYYNTSSVWQIIQQKLVT------DRVMARVKKETEEK 229 Query: 578 YNSQ 581 +Q Sbjct: 230 MKNQ 233 >gi|153854259|ref|ZP_01995558.1| hypothetical protein DORLON_01552 [Dorea longicatena DSM 13814] gi|149753034|gb|EDM62965.1| hypothetical protein DORLON_01552 [Dorea longicatena DSM 13814] Length = 363 Score = 163 bits (413), Expect = 7e-38, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 126/291 (43%), Gaps = 31/291 (10%) Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV--------GNFGIAIMLTTVFVK 372 E+ + +P +W + + +M++ YN + G G++I+L T+FV Sbjct: 1 MEEKIMVPSLLTAANWPIVGQLCWILGKVMNFIYNFLDKCLPSDSGLVGLSIILYTIFVY 60 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA 428 L PL KQ ++ + P+I +++K+K Q Q+ + Q+Y + + A Sbjct: 61 TLLLPLTIKQQRTSKMSSVMNPEIQAIQKKYKNKKDQASMMKQQEEIQQVYDKYGTSMSA 120 Query: 429 GCWPILLQIPVFFAIYKVISIS----LEMRHAPF----WGWIKDLAAADPTNIFTLFGIL 480 GC P+L+Q+P+ FA+Y VI E++ AP + + DL + I Sbjct: 121 GCLPLLIQMPLLFALYPVIYNIQKYVPEIKTAPKAVNVFLTLPDLTISPMQMIKNSGSYG 180 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFA 530 + + + P++ L+ + +K+S P + MP+ VF Sbjct: 181 FPAIMIIITAILLPVLSGLTQYGSIKLSQAISGQQLDKDNPMASTMNTMNITMPLFSVFM 240 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + S P G+ +YW S V+ VQQ I K H ++I + + L K + Sbjct: 241 VFSLPTGIGLYWIVSAVVRCVQQVFINK-HLSKISVEEILEQNKEKAEEKR 290 >gi|306834162|ref|ZP_07467282.1| membrane protein [Streptococcus bovis ATCC 700338] gi|304423735|gb|EFM26881.1| membrane protein [Streptococcus bovis ATCC 700338] Length = 306 Score = 163 bits (413), Expect = 7e-38, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 +Y + +PM L+ YF N VG FG+AI+L T+ V+ + PL Q + M + Sbjct: 37 IWYILGEPMAKLIQYFANNVGLGFGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + E+ + + Q Q ++ K + IN L G C P+L+Q+P F A+Y Sbjct: 97 KPIFEPINERMRNATTQEEKLAAQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G + + ++ ++ M+ Sbjct: 157 AQYTQGVSESTFLG-------------------IDLGTRSIPLTAVIAVLYLFQSWLSMQ 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + MP++ VF S PA +++YW SI+QQ + M + + L Sbjct: 198 GVAEEQRAAMKGTMYAMPLMMVFFGMSMPASVLLYWLVGGFFSIIQQLITMLII--KPKL 255 Query: 567 IDRLRSTFSKNY 578 ++ + F KN Sbjct: 256 RQKIAAEFEKNP 267 >gi|302870728|ref|YP_003839365.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora aurantiaca ATCC 27029] gi|315506965|ref|YP_004085852.1| membrane protein insertase, yidc/oxa1 family [Micromonospora sp. L5] gi|302573587|gb|ADL49789.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora aurantiaca ATCC 27029] gi|315413584|gb|ADU11701.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora sp. L5] Length = 333 Score = 163 bits (413), Expect = 7e-38, Method: Composition-based stats. Identities = 65/259 (25%), Positives = 116/259 (44%), Gaps = 38/259 (14%) Query: 339 FYFIAKPMFMLMSYFYN------------LVGNFGI--AIMLTTVFVKLLFFPLAKKQYV 384 +I + ++ +++ + N+ AI+ V V+++ FP+ KQ Sbjct: 4 LDWIYYAISWILLTWHSAWDAIGVPVGAVIGTNWAWILAIVFLVVTVRVILFPVFVKQIK 63 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S M+ +QPK+ EL+EK K + LQK M++LY+ NPL GC P+ LQIPVF ++ Sbjct: 64 SQRAMQALQPKVKELQEKHKGD-RETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLF 122 Query: 445 KVISI-SLEMRHAPFWGWIKD-LAAADPTNIFTLFGILPFYLPG-------------FMH 489 + S + + +GW D +A +FT F + Sbjct: 123 HTLRRLSPDNQGKTLYGWTVDQFNSASNATLFTAPISGKFGSTADELSRLGASTGTVKVV 182 Query: 490 VGIWPIIMSLSMFIQMKMS--------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 GI IIM + ++ + P Q ++L +P+ + + + FP G+IIY Sbjct: 183 AGILVIIMIATTYLTSRQMILKTGWAEDPQQRMVQRLMLYGIPLSLLISGAIFPIGVIIY 242 Query: 542 WSWSNVISIVQQAVIMKMH 560 W +N+ ++ QQ +++ Sbjct: 243 WVTNNLFTLGQQQWVLRKF 261 >gi|191639866|ref|YP_001989032.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23] gi|239630800|ref|ZP_04673831.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067927|ref|YP_003789950.1| preprotein translocase subunit YidC [Lactobacillus casei str. Zhang] gi|190714168|emb|CAQ68174.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23] gi|239527083|gb|EEQ66084.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300440334|gb|ADK20100.1| Preprotein translocase subunit YidC [Lactobacillus casei str. Zhang] gi|327383980|gb|AEA55456.1| Membrane protein oxaA 1 [Lactobacillus casei LC2W] gi|327387164|gb|AEA58638.1| Membrane protein oxaA 1 [Lactobacillus casei BD-II] Length = 278 Score = 163 bits (412), Expect = 8e-38, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 22/244 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + NL G N G+ I+ T+ +++L FPL+ S + + I P++ Sbjct: 38 WDRYVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYMSIKSMSKQQEIAPQL 97 Query: 397 DELREKF--KQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ K + Q L+ +LY + +NP+ GC PI++Q+P A+Y+ I + + Sbjct: 98 KELQKKYSSKDTETQTRLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSL 157 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F +L+ DP I + L LSM Q P + Sbjct: 158 QTGTFLWM--NLSQPDPLWIMQILATLFTLGTS-----------VLSMMAQ-----PTRN 199 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +++ PV+ + P+ L IYW +N S++QQ +I + ++ Sbjct: 200 SSSWLMMIVSPVMIFVFSITLPSALAIYWVVTNAFSMIQQLLIQNPFKIRREREAKAQAE 259 Query: 574 FSKN 577 K Sbjct: 260 KEKE 263 >gi|118442981|ref|YP_876977.1| inner membrane protein translocase component YidC [Clostridium novyi NT] gi|118133437|gb|ABK60481.1| Membrane protein oxaA [Clostridium novyi NT] Length = 246 Score = 163 bits (412), Expect = 9e-38, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 21/241 (8%) Query: 338 WFYFIAKPMFMLM-SYFYNLVGN----FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 W F +M ++ +++V N +G+ I++ T+ ++L+ FPL KQ S M I Sbjct: 17 WLNNAFIQFFQVMHNWIHSVVANPNISYGLTIIIVTIIIRLVLFPLNYKQIKSQVAMNEI 76 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP++ +L+ K+K P Q Q+ M++LYK + +NPL GC P+L+Q P+ A+Y V + + Sbjct: 77 QPELKKLQNKYKNDP-QKQQQEMMKLYKEYGVNPLGGCLPLLIQWPILIALYYVFNNLSK 135 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPP 511 + + L +P P + I PI+ L ++ M+ Sbjct: 136 IDPSITNVTFLGLKLMNPA----------ILSPSHWYTWILPILSGLLTYLSTAIMTSKN 185 Query: 512 ADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 AD Q M+ +M + + F L++YW +++ I Q V + + + Sbjct: 186 ADSAQIKQTRMMGGFMTLFITYMSFKFSTALVLYWVTNSLFQIGQTLVTQRSQKVKKEEV 245 Query: 568 D 568 Sbjct: 246 K 246 >gi|326692346|ref|ZP_08229351.1| preprotein translocase subunit YidC [Leuconostoc argentinum KCTC 3773] Length = 279 Score = 163 bits (412), Expect = 9e-38, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 94/248 (37%), Gaps = 23/248 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +A ++ N+G+ I++ T+ ++ L PL Q S M+ +QP + Sbjct: 43 WGAIVAAFTSAILGSAAWFGNNYGMGIIIFTILIRFLILPLMVYQVHSMMKMQGVQPALK 102 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L+ K+ Q++ LYK +NP A P+++Q+PV A+Y+ I S ++ Sbjct: 103 ALQAKYPGKDTESRQLMMAEQQALYKEAGVNPFASLLPLIVQMPVLIALYQAIYTSPVLK 162 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F L + DP + + + + ++ S P + Sbjct: 163 SGKFLWL--QLGSHDPYYVLPILAAVFTFASSWL----------------SMQSTPEQNG 204 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK--MHGAEIGLIDRLRS 572 + PVV F+ + P+ L +YW NV +Q + E L+ + Sbjct: 205 MTKAMPYIFPVVIFFSAIAVPSALSLYWVVGNVFQTIQTFFLQNPFKIRRERELLKQKER 264 Query: 573 TFSKNYNS 580 + Sbjct: 265 ELQRKIKK 272 >gi|116496323|ref|YP_808057.1| preprotein translocase subunit YidC [Lactobacillus casei ATCC 334] gi|116106473|gb|ABJ71615.1| Preprotein translocase subunit YidC [Lactobacillus casei ATCC 334] Length = 278 Score = 163 bits (412), Expect = 9e-38, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 22/244 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + NL G N G+ I+ T+ +++L FPL+ S + + I P++ Sbjct: 38 WDRYVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYMSIKSMSKQQEIAPQL 97 Query: 397 DELREKF--KQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ K + Q L+ +LY + +NP+ GC PI++Q+P A+Y+ I + + Sbjct: 98 KELQRKYSSKDTETQTRLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSL 157 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F +L+ DP I + L LSM Q P + Sbjct: 158 QTGTFLWM--NLSQPDPLWIMQILATLFTLGTS-----------VLSMMAQ-----PTRN 199 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +++ PV+ + P+ L IYW +N S++QQ +I + ++ Sbjct: 200 SSSWLMMIVSPVMIFVFSITLPSALAIYWVVTNAFSMIQQLLIQNPFKIRREREAKAQAE 259 Query: 574 FSKN 577 K Sbjct: 260 KEKE 263 >gi|298345820|ref|YP_003718507.1| hypothetical protein HMPREF0573_10694 [Mobiluncus curtisii ATCC 43063] gi|304390476|ref|ZP_07372429.1| preprotein translocase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298235881|gb|ADI67013.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063] gi|304326232|gb|EFL93477.1| preprotein translocase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 441 Score = 163 bits (412), Expect = 9e-38, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 113/273 (41%), Gaps = 28/273 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW M L+ + +AI+ T+ V+L+ PL KQ ++ M QP++ Sbjct: 29 GWVLRGVHEMITLLGVESGAGIGWVLAIVGMTIVVRLIIVPLFIKQIKASRAMSLAQPEL 88 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 + +K+K Q Q+ M + K + + A C P+L+Q+PV A+Y+++ Sbjct: 89 TAITKKYKGKRDQQTMMRQQEEMKAVQKKYGASMSASCLPLLVQMPVLLALYRLLYYMSA 148 Query: 453 MRHAPF--------WGWIKDLAAADPTNIFTLFGILPF----YLPGFMHVGIWPIIMSLS 500 + H G + A D T G F L + +GI + ++ Sbjct: 149 VAHGTMPEHVSIGGMGQQQAKALWDSTFFGESLGQTMFGPTSTLQTKIVIGIMVAFLVIT 208 Query: 501 MFIQ------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 MF+Q S P K ++ +MP+V++F GL+IYW+ SN Sbjct: 209 MFVQTAFLSMKNMSDEQLNSDNPMVKSTKSMMYFMPLVYLFTGPVVQVGLLIYWATSNTW 268 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 S+VQQ +++ + R R+ + + Sbjct: 269 SLVQQYFMIRAYPTRGSAAARWRADAHEQKFEK 301 >gi|139473067|ref|YP_001127782.1| membrane protein OxaA 1 precursor [Streptococcus pyogenes str. Manfredo] gi|306828048|ref|ZP_07461313.1| stage III sporulation protein J [Streptococcus pyogenes ATCC 10782] gi|134271313|emb|CAM29531.1| membrane protein OxaA 1 precursor [Streptococcus pyogenes str. Manfredo] gi|304429764|gb|EFM32808.1| stage III sporulation protein J [Streptococcus pyogenes ATCC 10782] Length = 269 Score = 163 bits (412), Expect = 9e-38, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 103/224 (45%), Gaps = 23/224 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW + + + + G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ Sbjct: 32 GWDQ-LVYLFARAIQWL-SFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPEL 89 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ Q L + LYK + +NP A P+L+Q+PV A+++ ++ + Sbjct: 90 RELQKKYAGKDTQTRMKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFL 149 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +LA D + + + +L ++ ++ + Sbjct: 150 KTGT--FLWVELAQHDHLYLLPVLAAVFTFLSTWL----------------TNLAAKEKN 191 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +++ MP++ F + +G+++YW+ SN +VQ ++ Sbjct: 192 VMMTVMIYVMPLMIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 235 >gi|322412738|gb|EFY03646.1| hypothetical protein SDD27957_10315 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 269 Score = 163 bits (412), Expect = 9e-38, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 102/224 (45%), Gaps = 23/224 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW + + + + G+ G+ I+L T+ ++LL PL Q S+ M++IQP++ Sbjct: 32 GWDQ-LVYLFARAIQWL-SFDGSIGVGIILFTLIIRLLLMPLFNMQIRSSQKMQDIQPEL 89 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ L + LYK + +NP A P+L+Q+PV A+++ ++ + Sbjct: 90 RELQKKYAGKDTETRMKLAEESQALYKKYGVNPYASLMPLLIQMPVMIALFQALTRVPFL 149 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +LA D I + L +L ++ ++ + Sbjct: 150 KTGT--FLWVELAQHDHLYILPVLAALFTFLSTWL----------------TNLAAREKN 191 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +++ MP++ F + +G+++YW+ SN +VQ ++ Sbjct: 192 IMMTIMIYVMPLMIFFMGFTLASGVVLYWTVSNAFQVVQLLLLN 235 >gi|71910022|ref|YP_281572.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS5005] gi|71852804|gb|AAZ50827.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS5005] Length = 269 Score = 163 bits (412), Expect = 1e-37, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 102/224 (45%), Gaps = 23/224 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW + + + + G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ Sbjct: 32 GWDQ-LVYLFARAIQWL-SFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPEL 89 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+ K+ Q L + LYK + +NP A P+L+Q+PV A+++ ++ + Sbjct: 90 RELQRKYAGKDTQTRMKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFL 149 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +LA D + + + +L ++ ++ + Sbjct: 150 KTGT--FLWVELAQHDHLYLLPVLAAVFTFLSTWL----------------TNLAAKEKN 191 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +++ MP++ F + +G+++YW+ SN +VQ ++ Sbjct: 192 VMMTVMIYVMPLMIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 235 >gi|42519904|ref|NP_965834.1| stage III sporulation protein J precursor [Lactobacillus johnsonii NCC 533] gi|227889159|ref|ZP_04006964.1| membrane protein chaperone oxaA [Lactobacillus johnsonii ATCC 33200] gi|41584194|gb|AAS09800.1| stage III sporulation protein J precursor [Lactobacillus johnsonii NCC 533] gi|227850388|gb|EEJ60474.1| membrane protein chaperone oxaA [Lactobacillus johnsonii ATCC 33200] Length = 291 Score = 163 bits (412), Expect = 1e-37, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 22/225 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + + +LV ++G AI++ T+ V+++ PL S A + +QP++ Sbjct: 48 WDRYIVYYISQFILWIASLVHDSYGWAIIIFTIIVRIILLPLNAISIRSMAKQQKVQPQM 107 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 D LR+K+ Q LQ+ +LYK INP GC P+L+Q+PV +A+Y+ I + ++ Sbjct: 108 DALRKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTPQL 167 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP I + + + +S +I +P + Sbjct: 168 QNGRFLWM--DLGRPDPYYIMPILAAVFTF---------------MSTYISQMSTPQSSQ 210 Query: 514 KGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 G + MP++ + + + +YW SN+ +VQ ++ Sbjct: 211 NGMTKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFILQ 255 >gi|225181149|ref|ZP_03734595.1| 60 kDa inner membrane insertion protein [Dethiobacter alkaliphilus AHT 1] gi|225168118|gb|EEG76923.1| 60 kDa inner membrane insertion protein [Dethiobacter alkaliphilus AHT 1] Length = 220 Score = 163 bits (412), Expect = 1e-37, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 124/217 (57%), Gaps = 9/217 (4%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I + ++ +F N+ GN+GIAI+L T+ ++L+ +PL KQ S M+ +QP++ +L+E Sbjct: 4 IVDFLNEILMFFNNVTGNYGIAIILLTLLIRLVTWPLQNKQLTSAKAMQELQPELKKLQE 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K + L +A ++L+K H +NP A C P+L+Q+PV +A+++V+ + + F G Sbjct: 64 KYKNDK-EKLNQATMELWKEHKVNPAASCLPLLIQMPVLWAMFQVLRDQVTIADTMFLGM 122 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 ++ D + LF + + II ++ F+Q KM +DK Q ++ Sbjct: 123 DMTVSVMDLRELGLLFAATS------IGYYLLVIISGVTTFLQQKMMM--SDKSQQAMMI 174 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MP++ +F FPAGL++YW +N +SI Q +I K Sbjct: 175 MMPLMLLFFSLQFPAGLVLYWVVNNSLSIGQHFLINK 211 >gi|227533510|ref|ZP_03963559.1| stage III sporulation protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188839|gb|EEI68906.1| stage III sporulation protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 264 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 22/244 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + NL G N G+ I+ T+ +++L FPL+ S + + I P++ Sbjct: 24 WDRYVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYMSIKSMSKQQEIAPQL 83 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ + L+ +LY + +NP+ GC PI++Q+P A+Y+ I + + Sbjct: 84 KELQKKYSSKDTESQTRLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSL 143 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F +L+ DP I + L LSM Q P + Sbjct: 144 QTGTFLWM--NLSQPDPLWIMQILATLFTLGTS-----------VLSMMAQ-----PTRN 185 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +++ PV+ + P+ L IYW +N S++QQ +I + ++ Sbjct: 186 SSSWLMMIVSPVMIFVFSITLPSALAIYWVVTNAFSMIQQLLIQNPFKIRREREAKAQAE 245 Query: 574 FSKN 577 K Sbjct: 246 KEKE 249 >gi|315657685|ref|ZP_07910567.1| preprotein translocase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492157|gb|EFU81766.1| preprotein translocase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 441 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 113/273 (41%), Gaps = 28/273 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW M L+ + +AI+ T+ V+L+ PL KQ ++ M QP++ Sbjct: 29 GWVLRGVHEMITLLGVESGAGIGWVLAIVGMTIVVRLIIVPLFIKQIKASRAMSLAQPEL 88 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 + +K+K Q Q+ M + K + + A C P+L+Q+PV A+Y+++ Sbjct: 89 TAITKKYKGKRDQQTMMRQQEEMKAVQKKYGASMSASCLPLLVQMPVLLALYRLLYYMSA 148 Query: 453 MRHAPF--------WGWIKDLAAADPTNIFTLFGILPF----YLPGFMHVGIWPIIMSLS 500 + H G + A D T G F L + +GI + ++ Sbjct: 149 VAHGTMPEHVSIGGMGQQQAKALWDSTFFGESLGQTMFGPTSTLQTKIVIGIMVAFLVIT 208 Query: 501 MFIQ------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 MF+Q S P K ++ +MP+V++F GL+IYW+ SN Sbjct: 209 MFVQTAFLSMKNMSDEQLNSDNPMVKSTKSMMYFMPLVYLFTGPVVQVGLLIYWATSNTW 268 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 S+VQQ +++ + R R+ + + Sbjct: 269 SLVQQYFMIRAYPTRGSAAARWRADAHEQKFEK 301 >gi|227513522|ref|ZP_03943571.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus buchneri ATCC 11577] gi|227524665|ref|ZP_03954714.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus hilgardii ATCC 8290] gi|227083395|gb|EEI18707.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus buchneri ATCC 11577] gi|227088149|gb|EEI23461.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus hilgardii ATCC 8290] Length = 343 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 114/254 (44%), Gaps = 33/254 (12%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 +G Y ++A+P +M +VG++G AI++ TV V++ P+ +Q M+ Sbjct: 33 YGLVYDYLARPAQSIMEAIAQIVGSYGWAIVVLTVIVRMFLLPIMVRQMKSSTIQQERMQ 92 Query: 391 NIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++ EL+++ K + Q +AM+ LY+ +NI+ G C P+++Q+P+F A+Y Sbjct: 93 MIRPQMRELQQRQKAAKTTEEQTAASQAMMALYRQNNISMTGGIGCLPLIIQMPIFTALY 152 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S E+ H F G ++ + + L + L G ++ Sbjct: 153 AAIRYSPELSHTVFMGIRLGQSS----WLLAVLSFLSYLLQG---------------YLM 193 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M +P K ++ P++ + S PAGL IY+ + + +Q ++ Sbjct: 194 MLGTPKAQKKQMGAMMLMSPIMILLFTISAPAGLGIYFFIGGLFACLQTIIMN---LYRP 250 Query: 565 GLIDRLRSTFSKNY 578 G+ ++ Sbjct: 251 GIRKKIAKEMEGKK 264 >gi|297243216|ref|ZP_06927151.1| preprotein translocase subunit YidC [Gardnerella vaginalis AMD] gi|296888750|gb|EFH27487.1| preprotein translocase subunit YidC [Gardnerella vaginalis AMD] Length = 337 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 117/254 (46%), Gaps = 34/254 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-------------NFGIAIMLTTVFVKLLFFPLAKKQ 382 GWFY I P+ LM+ +L ++ +I+ + V FP K Sbjct: 14 LGWFYKILTPVEWLMTQIMSLFHKLLTLLGMNEIGFSWVFSIVFLVLVVHACIFPAFIKS 73 Query: 383 YVSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 M+ I PK+ ++++K+K + + +Q+ M++LY+ + NP C P+++Q P Sbjct: 74 IKGMRKMQAIAPKVKKIQQKYKGKNDPASKEAMQREMMKLYQDNKANPAGSCLPMMIQGP 133 Query: 439 VFFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGI------LPFYLPGFMHVG 491 F +I+ +S+ + R D+A A +FG+ + G + + Sbjct: 134 AFMSIWYTLSVIPFIARGKHAALGAFDIATAQQFVKTRVFGVGVADTFMTTAGAGKIVIV 193 Query: 492 IWPIIMSLSMFIQM-----KMSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIY 541 I+ ++M +M+ K PP + +G Q +++ P+++VF+ + P +++Y Sbjct: 194 IFVVLMCAAMWYMQFNNIRKNLPPESKQGSQYTVQKLMMWGFPLIYVFSAFAMPFAMLVY 253 Query: 542 WSWSNVISIVQQAV 555 W +NVI++++ Sbjct: 254 WLVNNVINMLRSIW 267 >gi|304318135|ref|YP_003853280.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779637|gb|ADL70196.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 218 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I + L+ + Y+ VGN+G+AI++ T+ ++++ P +Q + MK I P +++L++ Sbjct: 4 IGMYLGQLLKFIYDFVGNYGVAIIIFTILIRIVLLPFYVQQMGTMKKMKEINPLVEDLKK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + P Q L + M++LYK N+NP++GC P+LL + + + ++ ++ A + W Sbjct: 64 KYAKDP-QKLNEEMMKLYKEKNVNPMSGCLPMLLPLVILWPLFAMLRNYPAFSTAS-FLW 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 +K LA DP I PI+ ++ +I M D Q + Sbjct: 122 LKSLAEKDPYFIL-------------------PILSGVTTYISSAMI--QTDNSQKSMNL 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M ++ S PAG+ IYW SN+ I QQ ++ Sbjct: 161 IMSAFMIWITVSLPAGIGIYWVTSNIFQIAQQYFFLR 197 >gi|225570322|ref|ZP_03779347.1| hypothetical protein CLOHYLEM_06419 [Clostridium hylemonae DSM 15053] gi|225160854|gb|EEG73473.1| hypothetical protein CLOHYLEM_06419 [Clostridium hylemonae DSM 15053] Length = 356 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 35/289 (12%) Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF--------GIAIMLTTVFVKLLFF 376 + +W IA + +M++ Y ++ N G++I+ T+ V + Sbjct: 1 MTAATLLTAANWPIVGQIAWLLGKVMNFIYTVLDNILPSDNGLIGLSIIFYTIIVYTIML 60 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWP 432 PL KQ + + P+I +++K+K Q Q+ + Q+Y + + GC P Sbjct: 61 PLTVKQQKTAKMSSVMNPEIQAIQKKYKNKKDQASMMKQQEEVQQVYDKYGTSMTGGCLP 120 Query: 433 ILLQIPVFFAIYKVISISLEMRHA--------PFWGWIKDLAAADPTNI--FTLFGILPF 482 +L+Q+P+ FA+Y VI A + I DL A I FGI P Sbjct: 121 LLIQMPLLFALYPVIYDMQRYVPAIKGAATSVNKFITIPDLTMAPIQMIKESGSFGIAPA 180 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALS 532 + + + P++ L+ ++ +K+S P + MP+ VF + Sbjct: 181 VVI--ITAILLPVLSGLTQYLSIKLSQNISGQQMDKDNPMAGTMKTMNMTMPIFSVFMVF 238 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + +G+ +YW S V+ VQQ +I K H ++ + D + K + Sbjct: 239 TLSSGIGLYWIVSAVVRCVQQVLINK-HLSKTSVEDIIEKNKEKAAEKR 286 >gi|330253081|gb|AEC08175.1| inner membrane protein ALBINO3 [Arabidopsis thaliana] Length = 432 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 32/245 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M +++ + + +G AI+L T+ VK +PL K+Q ST M+ Sbjct: 111 GWFGFISDAMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQ 170 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC-WPILLQIPVFFAIYKVISI 449 N+QPKI +++++ + + +Q +LYK +NPLAG W L P A + Sbjct: 171 NLQPKIKAIQQRYAGN-QERIQLETSRLYKQAGVNPLAGFFWIPSLGGPTSIAARQS--- 226 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + D G P + + P+++ S ++ M++ Sbjct: 227 ---GSGISWLFPFVD-------------GHPPLGWYDTVAYLVLPVLLIASQYVSMEIMK 270 Query: 510 PPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 PP D Q ++ ++P++ + S P+GL IYW +NV+S QQ + K+ GA+ Sbjct: 271 PPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWLTNNVLSTAQQVYLRKLGGAKP 330 Query: 565 GLIDR 569 + + Sbjct: 331 NMDEN 335 >gi|251781821|ref|YP_002996123.1| OxaA-like protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390450|dbj|BAH80909.1| OxaA-like protein precursor [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 307 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 108/252 (42%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + F+ KPM + YF N G +G+AI++ T+ V+ L PL Q + M + Sbjct: 37 IWEFLGKPMSYFIDYFANNAGLGYGLAIIIVTIVVRTLILPLGLYQSWKASYQSEKMAFL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 97 KPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G DL + + + L F+ ++ M Sbjct: 157 AQYTKGVSTSTFMGI--DLGSR-SLVLTAIIAALYFF----------------QSWLSMM 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + ++ MP++ + S PAG+ +YW SI+QQ + + + L Sbjct: 198 AVSEEQREQMKAMMYTMPIMMIVMSFSLPAGVGLYWLVGGFFSIIQQLITTYIL--KPRL 255 Query: 567 IDRLRSTFSKNY 578 ++ ++KN Sbjct: 256 HKQIEEEYAKNP 267 >gi|224100107|ref|XP_002311746.1| 60 kDa inner membrane protein [Populus trichocarpa] gi|222851566|gb|EEE89113.1| 60 kDa inner membrane protein [Populus trichocarpa] Length = 281 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 67/221 (30%), Positives = 108/221 (48%), Gaps = 18/221 (8%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L TV VK FPL+KKQ S M+++QP+I +++ + + +Q +LY Sbjct: 62 YGFAIILLTVLVKAATFPLSKKQVESAMAMRSLQPQIKAVQQLYAGD-QERIQLETARLY 120 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLAAADP-------T 471 K INPLAGC P L IPV+ +Y+ +S E + WI LA + Sbjct: 121 KLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAERQNGS 180 Query: 472 NIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFI-----QMKMSPPPADKGQAMILNW 522 I LF G P + + P ++ + ++ Q S P K I+ + Sbjct: 181 GISWLFPFVDGQPPLGWSDTVAYLVLPAMLVVLQYMSVQIMQSSQSDDPNVKNSQAIMKF 240 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P++ + S P+GL +YW +N++S QQ + K+ GA+ Sbjct: 241 LPLMIGYFSLSVPSGLSLYWLTNNILSTTQQVWLQKLGGAK 281 >gi|184156317|ref|YP_001844657.1| hypothetical protein LAF_1841 [Lactobacillus fermentum IFO 3956] gi|183227661|dbj|BAG28177.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] gi|299783733|gb|ADJ41731.1| Putative uncharacterized protein [Lactobacillus fermentum CECT 5716] Length = 277 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 99/223 (44%), Gaps = 21/223 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N+ G +G+ I++ T+ ++++ P+ Q S + + P++ Sbjct: 37 WDHYIVYNCSRFIIWLSNIFGGYGMGIIIFTIIIRIIILPMMFYQTKSMMKTQELAPQLK 96 Query: 398 ELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++K+ + +Q+ +LYK +NP A P+L+Q+PV +A+Y+ I + +++ Sbjct: 97 ALQKKYSSKDRETMQQLQIEQQKLYKEAGVNPFASMLPLLIQLPVMWALYQAIWRTAQLK 156 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F L DP + + + ++ ++ + S P + Sbjct: 157 TGTFLWL--QLGHTDPYFVLPILAAVFTFISSWLSMA----------------SMPEKNS 198 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + MP++ F F A + +YW +N +VQ VI Sbjct: 199 MTTTMTWVMPIMIFFMALQFSAAITLYWVVTNAFQVVQTLVIQ 241 >gi|251783353|ref|YP_002997658.1| membrane protein oxaA 1 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391985|dbj|BAH82444.1| membrane protein oxaA 1 precursor [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 271 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 29/227 (12%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW Y A+ + L + G+ G+ I+L T+ ++LL PL Q S+ M++IQ Sbjct: 34 GWDQMVYLFARAIQWL-----SFDGSIGVGIILFTLIIRLLLMPLFNMQIKSSQKMQDIQ 88 Query: 394 PKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ EL++K+ L + LYK + +NP A P+L+Q+PV A+++ ++ Sbjct: 89 PELRELQKKYAGKDTETRMKLAEESQALYKKYGVNPYASLMPLLIQMPVMIALFQALTRV 148 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 ++ +LA D I + L +L ++ ++ Sbjct: 149 PFLKTGT--FLWVELAQHDHLYILPVLAALFTFLSTWL----------------TNLAAR 190 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + +++ MP++ F + +G+++YW+ SN +VQ ++ Sbjct: 191 EKNIMMTIMIYVMPLMIFFMGFTLASGVVLYWTVSNAFQVVQLLLLN 237 >gi|324999878|ref|ZP_08120990.1| preprotein translocase subunit YidC [Pseudonocardia sp. P1] Length = 388 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 108/264 (40%), Gaps = 40/264 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ +M ++ + G + ++++ ++L+ + Q S M Sbjct: 2 LDFIYYPVSFIMWVWHKVFGFVLGEDSGFAWALSVVFLVFTLRLILYKPFVTQVRSMRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + + P++ +LR+K+ Q L M +L + + NPL GC PIL+QIPVF ++ V+ Sbjct: 62 QEMAPEMQKLRKKYAND-RQKLATEMQKLQQQNGANPLMGCLPILVQIPVFIGLFHVLRE 120 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTL---FGILPF------------YLPGFMHVGIWP 494 + ++ ++ A+ +++F I P Y+ ++ + Sbjct: 121 FKPGKTENYFFNAQENASFVDSDLFGSKLGSAIFPLQNTASVTDLGGNYVAQWVVMVPLM 180 Query: 495 IIMSLSMFIQMKMS---------------PPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 I + I + S P A+ Q ++L P+ V P ++ Sbjct: 181 IAAGIFTHITARHSVARQQAQIAAGTAAANPQAEIMQKLMLYVFPIGVVVGAPFLPLAVL 240 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 YW +N+ ++ QQ + K AE Sbjct: 241 FYWVSNNLWTLWQQHHVYKRIDAE 264 >gi|145346453|ref|XP_001417701.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] gi|144577929|gb|ABO95994.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] Length = 264 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 68/250 (27%), Positives = 124/250 (49%), Gaps = 23/250 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGI------AIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GW ++ + L+ + G+ AI++ T+ VK + +PL + Q VS+ NMK Sbjct: 17 GWLAPVSDALEDLLFAIQGQLQGLGVPYSTGNAIIIVTILVKFVTYPLTRDQVVSSLNMK 76 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QP+I +REK+ + + + K + ++Y+ + +NPLAGC P LL PV +Y+ + Sbjct: 77 NLQPQIAAIREKY-EDDQERMNKEINRVYEENGVNPLAGCGPALLTFPVLAGLYRAFNN- 134 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--------WPIIMSLSMF 502 + A W + A PT+ L +LP +G +P++ ++S F Sbjct: 135 AGIDGAFDEAWFFLPSLAGPTDARDLSWLLPLDSDYAPPIGWEEASLYLIFPVLTTISQF 194 Query: 503 IQMKMSPPP------ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + M++ P K Q+++L +P+ + + PAGL +YW W+NV + Q + Sbjct: 195 VSMEVLKPEETEKTDEMKNQSVLLKLLPLFIGYISLTVPAGLALYWFWNNVFTTGIQVFL 254 Query: 557 MKMHGAEIGL 566 + GA+ + Sbjct: 255 -RNGGAKATV 263 >gi|206901409|ref|YP_002251654.1| sporulation associated-membrane protein [Dictyoglomus thermophilum H-6-12] gi|206740512|gb|ACI19570.1| sporulation associated-membrane protein [Dictyoglomus thermophilum H-6-12] Length = 209 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 63/223 (28%), Positives = 114/223 (51%), Gaps = 23/223 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +A + ++ FY L GN+G+AI+ + V+++ +PL Q S + IQP+I +++E Sbjct: 5 LANGLGYILELFYKLTGNYGVAIIFLVILVRIILYPLTHAQLKSLFMQQKIQPEIKKIQE 64 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 KFK P + + K ++ LY+ + INP+ GC P+L+Q P+ A+Y+++ + + P + W Sbjct: 65 KFKDDP-KEMNKQIMLLYQQYKINPMMGCLPLLIQFPILIALYQLL-LHYKYAVTPKFLW 122 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I DL D I + L Y G + ++ P K Q I+N Sbjct: 123 ISDLTKPD--YILLIVMALVTYFSGEL----------------SSLASSPEQKSQQRIMN 164 Query: 522 WMPVVFV---FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + F L PAG+++YW S++ ++QQ ++ ++H Sbjct: 165 IFTTMLFTGMFLLYKVPAGVMLYWLVSSLFQLLQQVIVFRLHK 207 >gi|306832024|ref|ZP_07465179.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978972|ref|YP_004288688.1| inner membrane protein oxaA [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|304425950|gb|EFM29067.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178900|emb|CBZ48944.1| Inner membrane protein oxaA [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 306 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 ++ + +PM L+ YF N VG FG+AI+L T+ V+ + PL Q + M + Sbjct: 37 IWHILGEPMAKLIQYFANNVGLGFGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + E+ + + Q Q ++ K + IN L G C P+L+Q+P F A+Y Sbjct: 97 KPIFEPINERMRNATTQEEKLAAQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G + + ++ ++ M+ Sbjct: 157 AQYTQGVSESTFLG-------------------IDLGTRSIPLTAVIAVLYFFQSWLSMQ 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + MP++ VF S PA +++YW SI+QQ + M + + L Sbjct: 198 GVAEEQRAAMKGTMYVMPLMMVFFGMSMPASVLLYWLVGGFFSIIQQLITMFII--KPRL 255 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 256 RKKIAVEFEKNP 267 >gi|239622135|ref|ZP_04665166.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515326|gb|EEQ55193.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 338 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 109/253 (43%), Gaps = 36/253 (14%) Query: 338 WFYFIAKPMFM----LMSYFYNLV----------GNFGIAIMLTTVFVKLLFFPLAKKQY 383 I +P+ L++ F++ + +GIAIM + +++ PL Q Sbjct: 6 ILNHILRPLEWVVAQLLTLFHHALVTFGMTAGPSPAWGIAIMCLVLVIRICLLPLFLSQM 65 Query: 384 VSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 + ++ +QP+I ++ K+ + +Q+ ++ L + +N NPL C P L+Q P+ Sbjct: 66 RAMQRIQVLQPQIQRIQHKYAARKDPRSKEAMQREIMALQQRYNANPLGSCLPSLIQAPI 125 Query: 440 FFAIYKVISISLEMR--HAPFWGWIKDLAAAD--PTNIFTLFGILPFYL----PGFMHVG 491 +++ + + +A G I A D ++IF + F + +G Sbjct: 126 LCSLFYTLQSLPAIADGNAEPLGGIDHTMAGDIESSSIFGVRIADSFGTVASPQSRIIIG 185 Query: 492 IWPIIMSLSMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 + +M L++F M P + Q M + P ++V + ++ P G+++Y Sbjct: 186 VAVALMCLTLFAIQWMLIHRNTSKDAMVSPQFRVQKMTVFVFPAIYVVSGATLPFGVLLY 245 Query: 542 WSWSNVISIVQQA 554 W +N+ ++ Q Sbjct: 246 WLTNNLWNLGQTL 258 >gi|227510513|ref|ZP_03940562.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190165|gb|EEI70232.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 343 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 114/254 (44%), Gaps = 33/254 (12%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 +G Y ++A+P +M +VG++G AI++ TV V++ P+ +Q M+ Sbjct: 33 YGLVYDYLARPAQSIMEAIAQIVGSYGWAIVVLTVIVRMFLLPIMVRQMKSSTIQQERMQ 92 Query: 391 NIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++ +L+++ K + Q +AM+ LY+ +NI+ G C P+++Q+P+F A+Y Sbjct: 93 MIRPQMRKLQQRQKAAKTTEEQTAASQAMMALYRQNNISMTGGIGCLPLIIQMPIFTALY 152 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S E+ H F G ++ + + L + L G ++ Sbjct: 153 AAIRYSPELSHTVFMGIRLGQSS----WLLAVLSFLSYLLQG---------------YLM 193 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M +P K ++ P++ + S PAGL IY+ + + +Q ++ Sbjct: 194 MLGTPKAQKKQMGAMMLMSPIMILLFTISAPAGLGIYFFIGGLFACLQTIIMN---LYRP 250 Query: 565 GLIDRLRSTFSKNY 578 G+ ++ Sbjct: 251 GIRKKIAKEMEGKK 264 >gi|20809127|ref|NP_624298.1| preprotein translocase subunit YidC [Thermoanaerobacter tengcongensis MB4] gi|38503074|sp|Q8R6K6|OXAA_THETN RecName: Full=Membrane protein oxaA gi|20517807|gb|AAM25902.1| Preprotein translocase subunit YidC [Thermoanaerobacter tengcongensis MB4] Length = 206 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + L+ + ++ VGN+G+AI++ TVF+++L P +Q MK IQP ++EL++ Sbjct: 4 IAMYLGQLLEFIHHYVGNYGVAIIVFTVFIRILLLPFYIQQMAMMKKMKEIQPLVEELKK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + P Q L ++LY+ INP GC P+LL + + + ++ ++ A + W Sbjct: 64 KYGKDP-QKLNMETMKLYQEKKINPFGGCLPMLLPLIILWPLFTMLRTYPAFSTAS-FLW 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + LA DP I PI+ +++ +I M DK Q + Sbjct: 122 MHSLAERDPYYII-------------------PILATVTTYISSAM--VATDKSQNSMNI 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M + + + PAG+ IYW SN+ IVQQ + M+ Sbjct: 161 MMSLFMGWITVTLPAGVGIYWVTSNIFQIVQQYIFMR 197 >gi|288906005|ref|YP_003431227.1| membrane protein [Streptococcus gallolyticus UCN34] gi|288732731|emb|CBI14305.1| putative conserved membrane protein [Streptococcus gallolyticus UCN34] Length = 306 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 ++ + +PM L+ YF N VG FG+AI+L T+ V+ + PL Q + M + Sbjct: 37 IWHILGEPMAKLIQYFANNVGLGFGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + E+ + + Q Q ++ K + IN L G C P+L+Q+P F A+Y Sbjct: 97 KPIFEPINERMRNATTQEEKLAAQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G + + ++ ++ M+ Sbjct: 157 AQYTQGVSESTFLG-------------------IDLGTRSIPLTAVIAVLYFFQSWLSMQ 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + MP++ VF S PA +++YW SI+QQ + M + + L Sbjct: 198 GVAEEQRAAMKGTMYVMPLMMVFFGMSMPASVLLYWLVGGFFSIIQQLITMFII--KPRL 255 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 256 RKKIAVEFEKNP 267 >gi|116333652|ref|YP_795179.1| preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367] gi|116098999|gb|ABJ64148.1| Preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367] Length = 300 Score = 162 bits (410), Expect = 2e-37, Method: Composition-based stats. Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 38/258 (14%) Query: 336 WGWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G+ Y ++A P +M + + G++G AI++ TV V+++ P+ +Q + Sbjct: 32 YGFVYDYLAVPGQHVMDWLAHIFGGSYGWAIIILTVIVRMVLLPIMVRQMRSATVQQEKI 91 Query: 390 KNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 I+P++ L+++ K + Q +AM+ LY+ + I+ G C P+L+Q+P+F A+ Sbjct: 92 SMIRPQMTALQKQQKAAKTPEEQQAASQAMMALYRNNGISMTGGIGCLPLLIQMPIFAAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ + F G ++ I L L + L G ++ Sbjct: 152 YAAIRYSPELSNTVFLGIPLGKSS----WILALLSFLSYLLQG---------------YL 192 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M P K M L PV+ +F S PAGL +Y+ + + +Q +I Sbjct: 193 SMLGMPEDQKKQMRMTLLLSPVMILFFTMSSPAGLGLYFFVGGLFACLQTLIIN------ 246 Query: 564 IGLIDRLRSTFSKNYNSQ 581 R+R + Q Sbjct: 247 -FYRPRIRREIKEKMKDQ 263 >gi|293191008|ref|ZP_06609052.1| membrane protein OxaA [Actinomyces odontolyticus F0309] gi|292820695|gb|EFF79661.1| membrane protein OxaA [Actinomyces odontolyticus F0309] Length = 446 Score = 162 bits (410), Expect = 2e-37, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 117/265 (44%), Gaps = 43/265 (16%) Query: 339 FYFIAKPMFMLMS----YFYNLV----------GNFGIAIMLTTVFVKLLFFPLAKKQYV 384 F I P +S + ++L+ + ++I+L T+ V++ PL KQ Sbjct: 2 FDAILHPFAWAISYVWVWIHDLLVLLGMSSGSGMAWVLSIVLLTILVRIAIIPLFLKQIR 61 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVF 440 S+ M+ IQP++ +++EK+K QV ++ M++ L + H ++P A C P+L+Q+PV Sbjct: 62 SSRAMQAIQPEMRKIQEKYKGKKDQVSRQKMMEETQALQRKHKVSPFASCLPMLVQMPVL 121 Query: 441 FAIYKVISISLEMRHAP---------FWGWIKDLAAADPTNIFTLFGILPFYL------- 484 F +Y+ I + + G + + + + N L L L Sbjct: 122 FGMYRAIIAVSSISNGTYTYRGEATDHLGPLTESVSTEIVNSTVLGVPLSHTLRESWGQP 181 Query: 485 PGFMHVGIWPIIMSLSMFIQMK---------MSPPPADKGQAMILNWMPVVFVFALSSFP 535 ++M + F+ M+ M P + Q ++ MP++F+F+ + F Sbjct: 182 TIVAVFIAAIVLMVVLQFVSMRLSFSRNMPDMGDNPMAQSQRSMMYVMPLMFIFSGAFFQ 241 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 G+++Y ++ ++ Q +K+ Sbjct: 242 MGVVVYTVTASFWALAQSLWTIKVM 266 >gi|320547389|ref|ZP_08041678.1| membrane protein [Streptococcus equinus ATCC 9812] gi|320447985|gb|EFW88739.1| membrane protein [Streptococcus equinus ATCC 9812] Length = 305 Score = 162 bits (410), Expect = 2e-37, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 ++ + +PM L+ YF N V FG+AI+L T+ V+ + PL Q + M + Sbjct: 37 IWHVLGEPMAKLIQYFANNVDLGFGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + E+ + + Q Q ++ K + IN L G C P+L+Q+P F A+Y Sbjct: 97 KPIFAPINERMRNAKTQEEKLAAQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G + + + I+ ++ M+ Sbjct: 157 AQYTNGVAESTFLG-------------------IDLGTRSMLLTAVIAILYFFQSWLSMQ 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + MP++ VF S PA +++YW SI+QQ + M + + L Sbjct: 198 AVAEEQRAAMKGTMYVMPLMMVFFGMSMPASVLLYWLVGGFFSIIQQLITMFII--KPKL 255 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 256 RKQIAEEFEKNP 267 >gi|46190726|ref|ZP_00121168.2| COG0706: Preprotein translocase subunit YidC [Bifidobacterium longum DJO10A] gi|322692115|ref|YP_004221685.1| hypothetical protein BLLJ_1929 [Bifidobacterium longum subsp. longum JCM 1217] gi|320456971|dbj|BAJ67593.1| conserved hypothetical protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 305 Score = 162 bits (410), Expect = 2e-37, Method: Composition-based stats. Identities = 50/231 (21%), Positives = 103/231 (44%), Gaps = 22/231 (9%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F +M + ++ +AI++ + V+ FPL KQ S M+ + PK+ ++ K+K Sbjct: 7 FFVMLGVSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKMQALAPKMQRIQNKYKGK 66 Query: 407 PPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GW 461 Q + + ++LY+ +++NP C P+L+Q PVF +++ +S + + Sbjct: 67 TDQASREAMSRETMKLYQDNDVNPAGSCLPMLIQGPVFMSMFYTLSAIPYIANGKRDALG 126 Query: 462 IKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIMSLSMFIQMKMSP----- 509 D+A A +FGI+ G +GI+ +M ++ S Sbjct: 127 AFDVATAKQFTQTDVFGIVSVTDNFTSAAASGKAVIGIFVFLMCFCLWFMQYFSMKRNMA 186 Query: 510 -----PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + Q +L PV+++F+ + P +++YW +NV ++ + Sbjct: 187 AASMNKQTETMQKAMLWLFPVMYIFSGVAMPFAVLVYWLTNNVCNLCRTLW 237 >gi|238061909|ref|ZP_04606618.1| inner membrane insertion protein [Micromonospora sp. ATCC 39149] gi|237883720|gb|EEP72548.1| inner membrane insertion protein [Micromonospora sp. ATCC 39149] Length = 327 Score = 162 bits (410), Expect = 2e-37, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 42/261 (16%) Query: 339 FYFIAKPMFMLMSYFYN------------LVGNFGI--AIMLTTVFVKLLFFPLAKKQYV 384 +I + ++ +++ + N+ AI+ V V+++ FP+ KQ Sbjct: 4 LDWIYYAISWILLTWHSAWDAIGVPVDAVIGTNWAWILAIVFLVVTVRVILFPVFVKQIK 63 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S M+ +QP++ EL+EK K + LQK M++LY+ NPL GC P+ LQIPVF ++ Sbjct: 64 SQRAMQALQPRVKELQEKHKGD-RETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLF 122 Query: 445 KVISI----------------------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 V+ S ++ AP G + AD G Sbjct: 123 HVLRRLDPAKVNKTLYGWTVEQFDSASSAKLFTAPIAGKFG--STADELARLGANGTTVK 180 Query: 483 YLPGFMHVGIW--PIIMSLSMFIQMKMSPPPADKG-QAMILNWMPVVFVFALSSFPAGLI 539 + G + + + + S M ++ + P K Q ++L +P+ + + + FP G+I Sbjct: 181 VIAGILVLVMMGTTYLTSRQMILKTGWAEDPQQKMIQRLMLYGIPLSLLVSGAIFPIGVI 240 Query: 540 IYWSWSNVISIVQQAVIMKMH 560 IYW +N+ ++ QQ +++ + Sbjct: 241 IYWVTNNLFTLGQQQWVLRKY 261 >gi|329668161|gb|AEB94109.1| stage III sporulation protein J precursor [Lactobacillus johnsonii DPC 6026] Length = 273 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 22/225 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + + +LV ++G AI++ T+ V+++ PL S A + +QP++ Sbjct: 30 WDRYIVYYISQFILWIASLVHDSYGWAIIIFTIIVRIILLPLNAISIRSMAKQQKVQPQM 89 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 D LR+K+ Q LQ+ +LYK INP GC P+L+Q+PV +A+Y+ I + ++ Sbjct: 90 DALRKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTPQL 149 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP I + + + +S +I +P + Sbjct: 150 QNGRFLWM--DLGRPDPYYIMPILAAVFTF---------------MSTYISQMSTPQSSQ 192 Query: 514 KGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 G + MP++ + + + +YW SN+ +VQ ++ Sbjct: 193 NGMTKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFILQ 237 >gi|154508234|ref|ZP_02043876.1| hypothetical protein ACTODO_00728 [Actinomyces odontolyticus ATCC 17982] gi|153797868|gb|EDN80288.1| hypothetical protein ACTODO_00728 [Actinomyces odontolyticus ATCC 17982] Length = 446 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 117/265 (44%), Gaps = 43/265 (16%) Query: 339 FYFIAKPMFMLMS----YFYNLV----------GNFGIAIMLTTVFVKLLFFPLAKKQYV 384 F I P +S + ++L+ + ++I+L T+ V++ PL KQ Sbjct: 2 FDAILHPFAWAISYVWVWIHDLLVLLGMSSGSGMAWVLSIVLLTILVRIAIIPLFLKQIR 61 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVF 440 S+ M+ IQP++ +++EK+K QV ++ M++ L + H ++P A C P+L+Q+PV Sbjct: 62 SSRAMQAIQPEMRKIQEKYKGKKDQVSRQKMMEETQALQRKHKVSPFASCLPMLVQMPVL 121 Query: 441 FAIYKVISISLEMRHAP---------FWGWIKDLAAADPTNIFTLFGILPFYL------- 484 F +Y+ I + + G + + + + N L L L Sbjct: 122 FGMYRAIIAVSSISNGTYTYRGEATDHLGPLTESVSTEIVNSTVLGVPLSHTLRESWGQP 181 Query: 485 PGFMHVGIWPIIMSLSMFIQMK---------MSPPPADKGQAMILNWMPVVFVFALSSFP 535 ++M + F+ M+ M P + Q ++ MP++F+F+ + F Sbjct: 182 TIVAVFIAAIVLMVVLQFVSMRLSFSRNMPDMGDNPMAQSQRSMMYVMPLMFIFSGAFFQ 241 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 G++IY ++ ++ Q +K+ Sbjct: 242 MGVVIYTVTASFWALAQSLWTIKVM 266 >gi|225352375|ref|ZP_03743398.1| hypothetical protein BIFPSEUDO_03992 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156882|gb|EEG70251.1| hypothetical protein BIFPSEUDO_03992 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 344 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 112/264 (42%), Gaps = 44/264 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-------------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WGW Y + P+ LM+ + ++ ++I+ + V+ FPL K Sbjct: 13 WGWLYKLLYPVEWLMTQIMAVFHKFLVMLGMNEIGFSWVMSIVFLVLVVQACVFPLFYKS 72 Query: 383 YVSTANMK----NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGC---W 431 M+ +QPK+ ++ K+K + + +Q+ M++LY+ ++ NP+ GC Sbjct: 73 MKGMRKMQAQMTVLQPKMQRIQNKYKGKNDPASKEAMQREMMKLYQDNDANPMGGCTSML 132 Query: 432 PILLQIPVFFAIYKVISISLEMRHA----PFWGWIKDLAAADPTNIFTLFGI------LP 481 P+ +Q PVF ++ +S + D+A A T+FG+ Sbjct: 133 PMFVQGPVFMCMFYTLSAIPYIARGKFRDGQGLGAFDIATAKQFTSTTVFGVNVADNFTT 192 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFAL 531 + G + + I+ +M ++ S + Q M+L P++++F+ Sbjct: 193 AAVHGKVVIAIFVALMCFCLWFMQYNSMKRNMAQSAANKQTEMMQKMMLWMFPIMYIFSG 252 Query: 532 SSFPAGLIIYWSWSNVISIVQQAV 555 + P +++YW +N+ ++++ Sbjct: 253 IAMPFAVLVYWLTNNICNLLRSIW 276 >gi|217966559|ref|YP_002352065.1| hypothetical protein [Dictyoglomus turgidum DSM 6724] gi|217335658|gb|ACK41451.1| 60 kDa inner membrane insertion protein [Dictyoglomus turgidum DSM 6724] Length = 209 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 66/222 (29%), Positives = 117/222 (52%), Gaps = 23/222 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +A + ++ FY L GN+G+AI+ + V+++ +PL Q S + IQP+I +++E Sbjct: 5 LANGLGYILELFYKLTGNYGLAIIFLVILVRIILYPLTHAQLKSLFMQQKIQPEIKKIQE 64 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 KFK P Q + K ++ LY+ + INP+ GC P+L+Q P+ A+Y+++ + + P + W Sbjct: 65 KFKDDP-QEMNKQIMLLYQQYKINPMMGCLPLLIQFPILIALYQLL-LHYKYAVTPQFLW 122 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I DL D I + + Y G + +S P K Q I+N Sbjct: 123 ISDLTKPD--YILLIIMAIVTYFSGEL----------------SSLSAAPEQKNQQRIMN 164 Query: 522 WM-PVVF--VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++F +F L PAG+++YW S++ ++QQ V+ ++H Sbjct: 165 IFTTLLFTGMFLLYKVPAGVMLYWLVSSLFQLLQQVVVFRLH 206 >gi|323128077|gb|ADX25374.1| hypothetical protein SDE12394_09760 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 269 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 29/227 (12%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW Y A+ + L + G+ G+ I+L T+ ++LL PL Q S+ M++IQ Sbjct: 32 GWDQMVYLFARAIQWL-----SFDGSIGVGIILFTLIIRLLLMPLFNMQIKSSQKMQDIQ 86 Query: 394 PKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ EL++K+ L + LYK + +NP A P+L+Q+PV A+++ ++ Sbjct: 87 PELRELQKKYAGKDTETRMKLAEESQALYKKYGVNPYASLMPLLIQMPVMIALFQALTRV 146 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 ++ +LA D I + L +L ++ ++ Sbjct: 147 PFLKTGT--FLWVELAQHDHLYILPVLAALFTFLSTWL----------------TNLAAR 188 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + +++ MP++ F + +G+++YW+ SN +VQ ++ Sbjct: 189 EKNIMMTIMIYVMPLMIFFMGFTLASGVVLYWTVSNAFQVVQLLLLN 235 >gi|322690180|ref|YP_004209914.1| hypothetical protein BLIF_2003 [Bifidobacterium longum subsp. infantis 157F] gi|320461516|dbj|BAJ72136.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis 157F] Length = 310 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 105/240 (43%), Gaps = 23/240 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W I F +M + ++ +AI++ + V+ FPL KQ S M+ + PK+ Sbjct: 4 WIMKIVHDFF-VMLGVSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKMQALAPKMQ 62 Query: 398 ELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 ++ K+K Q + + ++LY+ +++NP C P+L+Q PVF +++ +S + Sbjct: 63 RIQNKYKGKTDQASREAMSRETMKLYQDNDVNPAGSCLPMLIQGPVFMSMFYTLSAIPYI 122 Query: 454 RHAPFW-GWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIMSLSMFIQM 505 + D+A A +FGI+ G +GI+ +M ++ Sbjct: 123 ANGKRDALGAFDVATAKQFTQTDVFGIVSVTDNFTSAAASGKAVIGIFVFLMCFCLWFMQ 182 Query: 506 KMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 S + Q +L PV+++F+ + P +++YW +NV ++ + Sbjct: 183 YFSMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGVAMPFAVLVYWLTNNVCNLCRTLW 242 >gi|323126634|gb|ADX23931.1| OxaA-like protein precursor [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 307 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 108/252 (42%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + F+ KPM + YF N G +G+AI++ T+ V+ L PL Q + M + Sbjct: 37 IWEFLGKPMSYFIDYFANNAGLGYGLAIIIVTIVVRTLILPLGLYQSWKASYQSEKMAFL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 97 KPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G DL + + + L F+ ++ M Sbjct: 157 AQYTKGVSISTFMGI--DLGSR-SLVLTAIIAALYFF----------------QSWLSMM 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + ++ MP++ + S PAG+ +YW SI+QQ + + + L Sbjct: 198 AVSEEQREQMKAMMYTMPIMMIVMSFSLPAGVGLYWLVGGFFSIIQQLITTYIL--KPRL 255 Query: 567 IDRLRSTFSKNY 578 ++ ++KN Sbjct: 256 HKQIEEEYAKNP 267 >gi|283457086|ref|YP_003361650.1| YidC Inner membrane protein (Preprotein translocase subunit YidC) [Bifidobacterium dentium Bd1] gi|283103720|gb|ADB10826.1| YidC Inner membrane protein (Preprotein translocase subunit YidC) [Bifidobacterium dentium Bd1] Length = 309 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 107/241 (44%), Gaps = 31/241 (12%) Query: 346 MFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 M +M+ F+ + ++ ++I+ + V FPL K S M+ IQPK+ Sbjct: 1 MTQIMAIFHKFLTLLGMHPVGFSWVLSIIFLVLVVHACVFPLYYKTMKSMRKMQEIQPKM 60 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 ++ K+K Q +Q+ M++LY+ ++ NP+ C P+L+Q P+F ++ +S Sbjct: 61 ARIQNKYKGKNDQASKEAMQREMMKLYQDNDANPMGSCLPMLIQGPIFMCMFYTLSAIPY 120 Query: 453 M-RHAPFWGWIKDLAAADPTNIFTLF------GILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + R D A A T+F + + G + + I+ +M ++ Sbjct: 121 IARGKRAALGAFDQATALQFTKTTVFNTNVTDNFMTANIGGKVVIAIFVALMCFCLWFMQ 180 Query: 506 KMSP-----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 + + Q M+L P++++F+ ++ P +++YW +N++++ + Sbjct: 181 YNNMKRNMPQNGPQTKQTEMMQKMMLWMFPIMYIFSGATMPFAVLVYWLANNILNLCRSL 240 Query: 555 V 555 Sbjct: 241 W 241 >gi|289642462|ref|ZP_06474607.1| 60 kDa inner membrane insertion protein [Frankia symbiont of Datisca glomerata] gi|289507721|gb|EFD28675.1| 60 kDa inner membrane insertion protein [Frankia symbiont of Datisca glomerata] Length = 451 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 35/251 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +F+ P+F S+F + ++++L + V+++ FPL KQ + M+ +QPKI Sbjct: 15 FFHGGFGPIFGRDSFFA-----WALSVVLLVICVRIMIFPLFVKQVKAQRTMQLMQPKIK 69 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-------- 449 E+R+K+ Q + +++L K H NPL GC PILLQIP+F A++ V S Sbjct: 70 EIRDKYGHDRQQ-MNAKIMELQKEHG-NPLLGCLPILLQIPLFIALFHVFSHLRPVDRPG 127 Query: 450 ---------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI----I 496 L + K L + T+ + L F +V I+ + + Sbjct: 128 GVLEWAPRVGLTAQQVQQIAEAKLLGVSLSTSFTSSSNFLEFVQANGTNVKIFAVTLIVL 187 Query: 497 MSLSMFIQMKMSPP---PADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 M + F+ + P D QA++ L P++ FP +++YW +N+ S Sbjct: 188 MGATTFLTQRQIMARTGPVDPQQAIVQKVLLYGSPIMLAVFGFQFPIAVLLYWLTTNLWS 247 Query: 550 IVQQAVIMKMH 560 + QQ ++K Sbjct: 248 MGQQFFVIKKM 258 >gi|268320270|ref|YP_003293926.1| hypothetical protein FI9785_1808 [Lactobacillus johnsonii FI9785] gi|262398645|emb|CAX67659.1| conserved membrane protein [Lactobacillus johnsonii FI9785] Length = 291 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 22/225 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + + +LV ++G AI++ T+ V+++ PL S A + +QP++ Sbjct: 48 WDRYIVYYISQFILWIASLVHDSYGWAIIIFTIIVRIILLPLNAISIRSMAKQQKVQPQM 107 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 D LR+K+ Q LQ+ +LYK INP GC P+L+Q+PV +A+Y+ I + ++ Sbjct: 108 DALRKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTPQL 167 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP + + + + +S +I +P + Sbjct: 168 QNGRFLWM--DLGRPDPYYLMPILAAVFTF---------------MSTYISQMSTPQSSQ 210 Query: 514 KGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 G + MP++ + + + +YW SN+ +VQ ++ Sbjct: 211 NGMTKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFILQ 255 >gi|260662535|ref|ZP_05863430.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN] gi|260553226|gb|EEX26169.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN] Length = 259 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 99/223 (44%), Gaps = 21/223 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N+ G +G+ I++ T+ ++++ P+ Q S + + P++ Sbjct: 19 WDHYIVYNCSRFIIWLSNIFGGYGMGIIIFTIIIRIIILPMMFYQTKSMMKTQELAPQLK 78 Query: 398 ELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++K+ + +Q+ +LYK +NP A P+L+Q+PV +A+Y+ I + +++ Sbjct: 79 ALQKKYSSKDRETMQQLQIEQQKLYKEAGVNPFASMLPLLIQLPVMWALYQAIWRTAQLK 138 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F L DP + + + ++ ++ + S P + Sbjct: 139 TGTFLWL--QLGHTDPYFVLPILAAVFTFISSWLSMA----------------SMPEKNS 180 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + MP++ F F A + +YW +N +VQ VI Sbjct: 181 MTTTMTWVMPIMIFFMALQFSAAITLYWVVTNAFQVVQTLVIQ 223 >gi|257867718|ref|ZP_05647371.1| inner membrane protein [Enterococcus casseliflavus EC30] gi|257874045|ref|ZP_05653698.1| inner membrane protein [Enterococcus casseliflavus EC10] gi|257876623|ref|ZP_05656276.1| inner membrane protein [Enterococcus casseliflavus EC20] gi|257801801|gb|EEV30704.1| inner membrane protein [Enterococcus casseliflavus EC30] gi|257808209|gb|EEV37031.1| inner membrane protein [Enterococcus casseliflavus EC10] gi|257810789|gb|EEV39609.1| inner membrane protein [Enterococcus casseliflavus EC20] Length = 306 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 111/252 (44%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNI 392 + F+ KP+ +++ N ++G AI+ T+ V+++ PL Q V + M+ + Sbjct: 35 IYRFLVKPLGDMITMLVENFNWSYGWAIIAVTIVVRVIILPLGIHQSRKTMVQSEKMQFL 94 Query: 393 QPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P++D + K++ Q M ++Y +N++ G C P+L+Q+P+F A+Y Sbjct: 95 KPQVDIAQANLKKATTREEQMQAQAEMQKIYSENNVSMFGGIGCLPLLIQMPIFSALYFT 154 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + ++++ F+G ++ DP+ +F L + G++ P Sbjct: 155 ARYTQGIQNSEFFG----VSLGDPSILFVAIAGLSYLAQGYISTIGIP------------ 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 K +L P++ VF S PAG+ +YW V S +Q + + + + Sbjct: 199 ---EEQKKTMKTMLIVSPLMIVFMSMSAPAGVTLYWVVGGVFSCIQTFITNVIM--KPKI 253 Query: 567 IDRLRSTFSKNY 578 ++ + N Sbjct: 254 RAQVEAEMKANP 265 >gi|311112576|ref|YP_003983798.1| membrane protein OxaA [Rothia dentocariosa ATCC 17931] gi|310944070|gb|ADP40364.1| membrane protein OxaA [Rothia dentocariosa ATCC 17931] Length = 342 Score = 161 bits (408), Expect = 3e-37, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 100/255 (39%), Gaps = 34/255 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFG----------IAIMLTTVFVKLLFFPLAKKQYVSTA 387 + + ++ +F+ + + G + I+ T+ ++ + PL +Q S Sbjct: 7 ILWPFKLAVSAVLWFFHTIFTSIGMDPSSGFTWVLCIICLTLVMRAVTIPLFMRQIKSMR 66 Query: 388 NMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 M +Q I +L+ K+K Q + + + L+K H +P + C PI+ Q P+F + Sbjct: 67 GMNAMQGDIAKLQAKYKGKKDQLSRQAMAQEQMALFKKHGTSPFSSCMPIIAQTPIFLGL 126 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF----------YLPGFMHVGIW 493 Y+V+ + N +FG F + I Sbjct: 127 YQVLMGVSGAAANNEDILLLPAELVKQFNEAYIFGSPIFSTMMNPGNGNHTATVAQAIIM 186 Query: 494 PIIMSLSMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 ++MS + F K P + Q M++ P++F +FP G++ YW+ Sbjct: 187 ILLMSGTQFFIQKQLSAKNISEAAKSSPMFRQQQMMMYVFPLIFAVTGVNFPIGVMYYWT 246 Query: 544 WSNVISIVQQAVIMK 558 SN ++ QQ +++ Sbjct: 247 VSNFWALGQQWWVIR 261 >gi|212715145|ref|ZP_03323273.1| hypothetical protein BIFCAT_00031 [Bifidobacterium catenulatum DSM 16992] gi|212661826|gb|EEB22401.1| hypothetical protein BIFCAT_00031 [Bifidobacterium catenulatum DSM 16992] Length = 344 Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 112/264 (42%), Gaps = 44/264 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-------------NFGIAIMLTTVFVKLLFFPLAKKQ 382 WGW Y + P+ LM+ + ++ ++I+ + V+ FPL K Sbjct: 13 WGWLYKLLYPVEWLMTQIMAVFHKFLVMLGMNEIGFSWVMSIVFLVLVVQACVFPLFYKS 72 Query: 383 YVSTANMK----NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGC---W 431 M+ +QPK+ ++ K+K + + +Q+ M++LY+ ++ NP+ GC Sbjct: 73 MKGMRKMQAQMAVLQPKMQRIQNKYKGKNDPASKEAMQREMMKLYQDNDANPMGGCTSML 132 Query: 432 PILLQIPVFFAIYKVISISLEMRHA----PFWGWIKDLAAADPTNIFTLFGI------LP 481 P+ +Q PVF ++ +S + D+A A T+FG+ Sbjct: 133 PMFVQGPVFMCMFYTLSAIPYIARGKFRDGQGLGAFDIATAKQFTSTTVFGVNVADNFTT 192 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFAL 531 + G + + I+ +M ++ S + Q M+L P++++F+ Sbjct: 193 AAVHGKVVIAIFVALMCFCLWFMQYNSMKRNMAQSAANKQTEMMQKMMLWMFPIMYIFSG 252 Query: 532 SSFPAGLIIYWSWSNVISIVQQAV 555 + P +++YW +N+ ++++ Sbjct: 253 IAMPFAVLVYWLTNNICNLLRSIW 276 >gi|282851875|ref|ZP_06261237.1| putative stage III sporulation protein J [Lactobacillus gasseri 224-1] gi|282556982|gb|EFB62582.1| putative stage III sporulation protein J [Lactobacillus gasseri 224-1] Length = 256 Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 22/225 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + + +LV ++G AI++ T+ V+++ PL S A + +QP++ Sbjct: 48 WDRYIVYYISQFILWIASLVRDSYGWAIIIFTIIVRIILLPLNAISIKSMAKQQKVQPQM 107 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 D LR+K+ Q LQ+ +LYK INP GC P+L+Q+PV +A+Y+ I + ++ Sbjct: 108 DALRKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTPQL 167 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ F DL DP I + + +S +I +P + Sbjct: 168 QNGRFLWM--DLGRPDPYYIMPVLAAAFTF---------------ISTYISQMSTPQSSQ 210 Query: 514 KGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 G + MP++ + + + +YW SN+ +VQ ++ Sbjct: 211 NGMTKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFILQ 255 >gi|154486340|ref|ZP_02027747.1| hypothetical protein BIFADO_00149 [Bifidobacterium adolescentis L2-32] gi|154084203|gb|EDN83248.1| hypothetical protein BIFADO_00149 [Bifidobacterium adolescentis L2-32] Length = 344 Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 44/264 (16%) Query: 336 WGWFYFIAKPMFMLMSYF-------------YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 WGW Y + P+ LM+ + ++ ++I+ + V+ FPL K Sbjct: 13 WGWLYKLLYPVEWLMTQIMAGFHRFMVMLGMNEIGFSWVMSIVFLVIVVQACVFPLFYKS 72 Query: 383 YVSTANMK----NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGC---W 431 M+ +QPK+ ++ K+K + + LQ+ M++LY+ ++ NP+ GC Sbjct: 73 MKGMRKMQAQMAVLQPKMQRIQNKYKGKNDPASKEALQREMMKLYQDNDANPMGGCTSML 132 Query: 432 PILLQIPVFFAIYKVISISLEMRHA----PFWGWIKDLAAADPTNIFTLFGI------LP 481 P+ +Q PVF ++ +S + D+A A +FG+ Sbjct: 133 PMFVQGPVFMCMFYTLSAIPYIARGKFRNGSGLGAFDIATAKQFTSTNVFGVNVAENFTT 192 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFAL 531 + G + +GI+ +M +++ S + Q M+L P++++F+ Sbjct: 193 ADIHGKIIIGIFVALMCFCLWLMQYNSMKRNMAQSAANKQTEMMQKMMLWMFPIMYIFSG 252 Query: 532 SSFPAGLIIYWSWSNVISIVQQAV 555 + P +++YW +N+ ++++ Sbjct: 253 VAMPFAVLVYWLTNNICNLLRSVW 276 >gi|119026646|ref|YP_910491.1| membrane protein oxaA [Bifidobacterium adolescentis ATCC 15703] gi|118766230|dbj|BAF40409.1| membrane protein oxaA [Bifidobacterium adolescentis ATCC 15703] Length = 345 Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 44/264 (16%) Query: 336 WGWFYFIAKPMFMLMSYF-------------YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 WGW Y + P+ LM+ + ++ ++I+ + V+ FPL K Sbjct: 13 WGWLYKLLYPVEWLMTQIMAGFHRFMVMLGMNEIGFSWVMSIVFLVIVVQACVFPLFYKS 72 Query: 383 YVSTANMK----NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGC---W 431 M+ +QPK+ ++ K+K + + LQ+ M++LY+ ++ NP+ GC Sbjct: 73 MKGMRKMQAQMAVLQPKMQRIQNKYKGKNDPASKEALQREMMKLYQDNDANPMGGCTSML 132 Query: 432 PILLQIPVFFAIYKVISISLEMRHA----PFWGWIKDLAAADPTNIFTLFGI------LP 481 P+ +Q PVF ++ +S + D+A A +FG+ Sbjct: 133 PMFVQGPVFMCMFYTLSAIPYIARGKFRNGSGLGAFDIATAKQFTSTNVFGVNVAENFTT 192 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFAL 531 + G + +GI+ +M +++ S + Q M+L P++++F+ Sbjct: 193 ADIHGKIIIGIFVALMCFCLWLMQYNSMKRNMAQSAANKQTEMMQKMMLWMFPIMYIFSG 252 Query: 532 SSFPAGLIIYWSWSNVISIVQQAV 555 + P +++YW +N+ ++++ Sbjct: 253 VAMPFAVLVYWLTNNICNLLRSVW 276 >gi|34763009|ref|ZP_00143985.1| 60 kDa inner membrane protein YIDC [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237741004|ref|ZP_04571485.1| inner membrane protein YIDC [Fusobacterium sp. 4_1_13] gi|256846682|ref|ZP_05552138.1| inner membrane protein YIDC [Fusobacterium sp. 3_1_36A2] gi|294784389|ref|ZP_06749680.1| stage III sporulation protein J [Fusobacterium sp. 3_1_27] gi|27887310|gb|EAA24404.1| 60 kDa inner membrane protein YIDC [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229431048|gb|EEO41260.1| inner membrane protein YIDC [Fusobacterium sp. 4_1_13] gi|256717902|gb|EEU31459.1| inner membrane protein YIDC [Fusobacterium sp. 3_1_36A2] gi|294487961|gb|EFG35316.1| stage III sporulation protein J [Fusobacterium sp. 3_1_27] Length = 205 Score = 161 bits (407), Expect = 4e-37, Method: Composition-based stats. Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 22/222 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + + L++ VGNFGI+I++ T+ +K+L PL KQ S MK +QP+++ Sbjct: 4 IYNLLQQFFAFLLNTTDKYVGNFGISIIVVTILIKILLLPLTLKQDKSMKEMKKLQPELE 63 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ++++K+ Q+L ++LY+ H +NPL GC PIL+Q+P+ FA++ V+ + + + Sbjct: 64 KIKQKYANDK-QMLNIKTMELYREHKVNPLGGCLPILIQLPILFALFGVLRNGIIPKDSS 122 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F L DP I P++ F+Q K+ + Sbjct: 123 FLWM--KLVDPDPFYIL-------------------PVLNGAVSFLQQKLMGTSDNPQMK 161 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ P++ + P+GL +YW S+++++VQQ IMK Sbjct: 162 NMMFVFPILMIVISYRMPSGLQLYWLTSSILAVVQQYFIMKK 203 >gi|170018056|ref|YP_001728975.1| preprotein translocase subunit YidC [Leuconostoc citreum KM20] gi|169804913|gb|ACA83531.1| Preprotein translocase subunit YidC [Leuconostoc citreum KM20] Length = 279 Score = 161 bits (407), Expect = 4e-37, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 94/248 (37%), Gaps = 23/248 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +A ++ N+G+ I++ T+ ++ L PL Q S M+ +QP + Sbjct: 43 WSAIVAAFTSSILGTSAWFGNNYGLGIIVFTILIRFLILPLMVYQIQSMMKMQVVQPALK 102 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L+ K+ Q++ LYK +NP A P+++Q+PV FA+Y+ I S ++ Sbjct: 103 ALQAKYPGKDTESRQLMMAEQQALYKKEGVNPFASMLPLIVQMPVLFALYQSIYNSPVLK 162 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F L + DP + + + + ++ S P + Sbjct: 163 SGKFLWL--QLGSHDPYYVLPVLAAVFTFASSWL----------------SMQSTPEQNG 204 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK--MHGAEIGLIDRLRS 572 + PVV F+ + P+ L +YW N+ +Q + E L + Sbjct: 205 MTKAMPYIFPVVIFFSAMAVPSALSLYWVVGNLFQTIQTFFLQNPFKIRRERELAAQKER 264 Query: 573 TFSKNYNS 580 + Sbjct: 265 DMKRKIKK 272 >gi|81429494|ref|YP_396495.1| membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei 23K] gi|78611137|emb|CAI56190.1| Membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei 23K] Length = 277 Score = 160 bits (406), Expect = 4e-37, Method: Composition-based stats. Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 22/224 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + + ++ G ++G AI+ T+ ++L+ PL Q + + + P+I Sbjct: 38 WDHYIIYNFSRFLLWLADIFGGSYGWAIVAFTIIIRLIILPLTWWQSKTMMKQQEVAPEI 97 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ Q L++ +LY +NP+ GC P+L+Q+PV A+Y+ I + + Sbjct: 98 QALQKKYASKDVETQQKLREETQKLYAEAGVNPVIGCLPLLVQMPVLIALYQAIYRTSAL 157 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L ADP I + + + ++ MS P + Sbjct: 158 KSGSFLWM--QLGKADPYFIMAILAAVFTFATSYL----------------TMMSQPTKN 199 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +L MP++ + + + IYW +N S+ Q VI Sbjct: 200 ATTTAMLWVMPIMIFVMAMNIASAVSIYWVVTNAFSVGQTMVIQ 243 >gi|116671593|ref|YP_832526.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24] gi|116611702|gb|ABK04426.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24] Length = 275 Score = 160 bits (406), Expect = 4e-37, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 39/259 (15%) Query: 338 WFYFIAKPMFML----MSYFYNLVGNFG----------IAIMLTTVFVKLLFFPLAKKQY 383 +F I P L M F++ + G ++I+ + ++ P+ +Q Sbjct: 7 FFEAIMLPFKWLVSTIMVGFHDGLAAMGMPAADGWTWTLSIIGLVLVIRAALIPVFLQQV 66 Query: 384 VSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 + M+ +QP + L++K+K Q + + + LYK H +P + C P+L+Q P Sbjct: 67 NAQRRMRRLQPDLKSLQDKYKGKADQLSRQAMAQEQMALYKKHGTSPFSACLPLLIQAPF 126 Query: 440 FFAIYKVISISLEMRHAPFW---GWIKDLAAADPTNIFTLFGILPFY--------LPGFM 488 F A+++V+S + + D ++IF L + Sbjct: 127 FLALFQVLSGISSAAGRGQGIGTMSHEQVVQFDQSSIFGAPLSASLLHGSGGGDALAVTV 186 Query: 489 HVGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGL 538 + + M+ + F+ K+ PA Q MIL +PV+F FP G+ Sbjct: 187 LAIVMILAMTAAQFLTQKLIMARFASGEAEAGPAMIQQKMILYVLPVIFGAGGIVFPIGV 246 Query: 539 IIYWSWSNVISIVQQAVIM 557 +IYW+ SN+ ++ QQ V+ Sbjct: 247 LIYWTVSNLWTLAQQFVVR 265 >gi|89897803|ref|YP_521290.1| hypothetical protein DSY5057 [Desulfitobacterium hafniense Y51] gi|219670952|ref|YP_002461387.1| hypothetical protein Dhaf_4959 [Desulfitobacterium hafniense DCB-2] gi|89337251|dbj|BAE86846.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219541212|gb|ACL22951.1| 60 kDa inner membrane insertion protein [Desulfitobacterium hafniense DCB-2] Length = 231 Score = 160 bits (406), Expect = 4e-37, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 39/242 (16%) Query: 342 IAKPMFMLMSYFYNLV-----GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 M L+ + YNL ++G+AI+L T+ +K L +PL KQ S IQPK+ Sbjct: 4 FVVWMTELLKWLYNLTDLVGFASYGLAIILLTIIIKTLIYPLTWKQMKSMRKTMEIQPKL 63 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E+++K+K +P + L + ++LYK HN+NP GC P+L+Q+P+F+A+Y + Sbjct: 64 QEIQKKYKNNP-EKLNQETMELYKKHNLNPAGGCLPLLVQLPIFWALYNTLFHF------ 116 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-------- 508 D ADP+ L+ + + I+ + F+Q K++ Sbjct: 117 -------DNYIADPSQAMFLWFSITENGNLVL-----AILAGATTFLQTKLTTASNPAMK 164 Query: 509 -------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P A Q M+L +MP+ + + P+GL +Y+ N++S++QQ I + Sbjct: 165 AQNNTGKPDAAQSTQKMMLYFMPLFMAYITWTVPSGLGLYFFTMNIVSVLQQLYINRKLN 224 Query: 562 AE 563 E Sbjct: 225 KE 226 >gi|15807143|ref|NP_295872.1| inner membrane protein, 60 kDa [Deinococcus radiodurans R1] gi|38503229|sp|Q9RSH5|OXAA_DEIRA RecName: Full=Membrane protein oxaA gi|6459947|gb|AAF11697.1|AE002049_2 inner membrane protein, 60 kDa, putative [Deinococcus radiodurans R1] Length = 428 Score = 160 bits (406), Expect = 4e-37, Method: Composition-based stats. Identities = 81/390 (20%), Positives = 151/390 (38%), Gaps = 64/390 (16%) Query: 164 NNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 N + +TI+L ++ + V N Q+ G P+ G Q + Sbjct: 47 NGVQVTKTITLHPRNFKVDVRTEVRN-GPAQVNMLFPGLGKADNPRVQAVPVGGQPASVQ 105 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI--PSKETSFHSQFKYLSD 280 G S+ +Y+ ++++ H I P + T Q Sbjct: 106 GSGTLSVQNIQYAALQENPSQIAH---------------ALIVRPQQGTKVDVQL----- 145 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 + + T++ ++ G E ++ L +F Sbjct: 146 --------TGGPQGLVTATLPATSSLEVYGGKNELIHLYQ----SGYTELPGLFQPNFFG 193 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 I+ + LM Y ++GN+G+ IM T+ ++L+ +PL + Q +TA M+ +QP E++ Sbjct: 194 QISLLIVKLMEALYKVIGNWGLVIMALTILLRLVMWPLMQAQGRTTARMQLVQPLQKEIQ 253 Query: 401 EKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 EK+K + +Q M QL + + +NP AGC+ LL PV A++ I Sbjct: 254 EKYKGKTDPESQRAMQMEMAQLMRDYQVNP-AGCFSTLLPFPVLIALWATIRNFEF---D 309 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + W+ DLA DP I + + + +++ + +P + Q Sbjct: 310 SGFLWLPDLATPDPFYILAVI---------------YLFVNLGQLYVSTRKTPE-MFRQQ 353 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 AMI +VF++ +FP+G+ +Y S Sbjct: 354 AMIY----LVFLYFALTFPSGVTLYIILST 379 >gi|28379981|ref|NP_786873.1| cell division protein [Lactobacillus plantarum WCFS1] gi|300769104|ref|ZP_07078993.1| stage III sporulation protein J [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308182185|ref|YP_003926313.1| cell division protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|38502978|sp|Q88RX1|OXAA1_LACPL RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|28272822|emb|CAD65751.1| cell division protein [Lactobacillus plantarum WCFS1] gi|300493344|gb|EFK28523.1| stage III sporulation protein J [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308047676|gb|ADO00220.1| cell division protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 277 Score = 160 bits (406), Expect = 4e-37, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 106/248 (42%), Gaps = 22/248 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W I + + NL G ++G+ I++ T+ ++++ PL Q + M+ +QP++ Sbjct: 36 WDGLIILNFSRAIIWLSNLFGHSYGLGIIVFTLIIRIIILPLMIFQTRNMVAMQEVQPQM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ Q LQ M +LY H ++P+A P+L+Q+P+ A+Y+ I + + Sbjct: 96 KALQKKYSSRDMETQQKLQAEMKKLYAKHGVHPMASMLPLLVQLPILIALYQAIWRTQAL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L + DP + + + + S ++ MK S P + Sbjct: 156 KTGSFLWL--QLGSKDPYYVLPILAAIFTF---------------ASSWLAMK-SQPEQN 197 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + MPV+ + + P+ L +YW SN + Q ++ + ++ Sbjct: 198 GMTTSMTYLMPVIILITAINVPSALSLYWVISNAFQVGQTLLLQNPFKINREREAKKQAE 257 Query: 574 FSKNYNSQ 581 + + Sbjct: 258 RDRKRTLE 265 >gi|116492484|ref|YP_804219.1| preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC 25745] gi|116102634|gb|ABJ67777.1| Preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC 25745] Length = 316 Score = 160 bits (406), Expect = 5e-37, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 34/255 (13%) Query: 336 WG-WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G + ++A P M+Y + L G++G+AI+L T V+L+ PL Q M Sbjct: 33 YGPIYDYLAIPTQHFMNYLSHLLCGSYGLAIILVTFVVRLILLPLMLNQSRKATIQQEKM 92 Query: 390 KNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 IQP++ L+ + + + + + M+ LYK +N++ G C PI++Q PVF A+ Sbjct: 93 AFIQPQLKVLQARNQAAKTPEERAAISQEMMALYKDNNVSMTGGIGCLPIIIQFPVFAAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ G + A P+ + L + L G++ Sbjct: 153 YAAIQYSPELHQ----GLFLGINLAKPSILLAAISFLVYLLQGWLGTLGVA--------- 199 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P K ++ P++ +F S P GL +Y++ V + +Q I Sbjct: 200 ------PEQRKMMRSMMIVSPLMILFFTFSSPGGLGLYFAVGGVFACIQTLAIN---LYR 250 Query: 564 IGLIDRLRSTFSKNY 578 + R++ KN Sbjct: 251 PKIKARIQEEMKKNP 265 >gi|322411167|gb|EFY02075.1| OxaA-like protein precursor [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 307 Score = 160 bits (406), Expect = 5e-37, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 107/252 (42%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + F+ KPM + YF N G +G+AI++ T+ V+ L PL Q + M + Sbjct: 37 IWEFLGKPMSYFIDYFANNAGLGYGLAIIIVTIVVRTLILPLGLYQSWKASYQSEKMAFL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 97 KPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G DL + + + L F+ ++ M Sbjct: 157 AQYTKGVSTSTFMGI--DLGSR-SLVLTAIIAALYFF----------------QSWLSMM 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + ++ MP++ + S PAG+ +YW SI+QQ + + + L Sbjct: 198 AVSEEQREQMKTMMYTMPIMMIVMSFSLPAGVGLYWLVGGFFSIIQQLITTYIL--KPRL 255 Query: 567 IDRLRSTFSKNY 578 + ++KN Sbjct: 256 HKQFEEEYAKNP 267 >gi|315223127|ref|ZP_07864995.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus anginosus F0211] gi|315187816|gb|EFU21563.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus anginosus F0211] Length = 305 Score = 160 bits (405), Expect = 5e-37, Method: Composition-based stats. Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 33/254 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G+ + I +PM + + YF N +G FG+AI++ T+ V+L+ PL + K + M Sbjct: 33 GFVWDIIGRPMSLAIQYFANNMGLGFGVAIIIVTLIVRLIILPLGLYQSWKSTYQSEKMN 92 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++P + ++E+ K + Q Q+A++ K + +N L G C P+L+Q+P F A+Y Sbjct: 93 YLKPIFEPIQERMKNAETQEEKLAAQQALMTAQKENGVNMLGGIGCLPLLIQLPFFSALY 152 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + + F G A+ + + G+L F VGI + Sbjct: 153 FSAQYTEGVAKSVFLGIPLGKAS---VLLTVIVGVLYFIQSALTLVGIDEV--------- 200 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + ++ P++ V + PAG+ +YW I I+QQ +I H Sbjct: 201 -------QKEQMKKMMYMSPLMIVIFSFTAPAGVTLYWVVGGFIMIIQQLIIN--HYIRP 251 Query: 565 GLIDRLRSTFSKNY 578 L R+ + N Sbjct: 252 QLRKRVAEEYKNNP 265 >gi|254558115|ref|YP_003064532.1| cell division protein [Lactobacillus plantarum JDM1] gi|254047042|gb|ACT63835.1| cell division protein [Lactobacillus plantarum JDM1] Length = 277 Score = 160 bits (405), Expect = 5e-37, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 106/248 (42%), Gaps = 22/248 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W I + + NL G ++G+ I++ T+ ++++ PL Q + M+ +QP++ Sbjct: 36 WDSLIILNFSRAIIWLSNLFGHSYGLGIIVFTLIIRIIILPLMIFQTRNMVAMQEVQPQM 95 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ Q LQ M +LY H ++P+A P+L+Q+P+ A+Y+ I + + Sbjct: 96 KALQKKYSSRDMETQQKLQAEMKKLYAKHGVHPMASMLPLLVQLPILIALYQAIWRTQAL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F L + DP + + + + S ++ MK S P + Sbjct: 156 KTGSFLWL--QLGSKDPYYVLPILAAIFTF---------------ASSWLAMK-SQPEQN 197 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + MPV+ + + P+ L +YW SN + Q ++ + ++ Sbjct: 198 GMTTSMTYLMPVIILITAINVPSALSLYWVISNAFQVGQTLLLQNPFKINREREAKKQAE 257 Query: 574 FSKNYNSQ 581 + + Sbjct: 258 RDRKRTLE 265 >gi|186503883|ref|NP_001118405.1| ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] gi|330253080|gb|AEC08174.1| inner membrane protein ALBINO3 [Arabidopsis thaliana] Length = 342 Score = 160 bits (405), Expect = 5e-37, Method: Composition-based stats. Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 24/231 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M +++ + + +G AI+L T+ VK +PL K+Q ST M+ Sbjct: 111 GWFGFISDAMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQ 170 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 N+QPKI +++++ + + +Q +LYK +NPLAGC P L IPV+ +Y+ +S Sbjct: 171 NLQPKIKAIQQRYAGN-QERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNV 229 Query: 451 L-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGIW--------PIIMS 498 E + WI L + + P G +G + P+++ Sbjct: 230 ANEGLFTEGFFWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLI 289 Query: 499 LSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSW 544 S ++ M++ PP D Q ++ ++P++ + S P+GL IYW Sbjct: 290 ASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWLA 340 >gi|320161691|ref|YP_004174916.1| hypothetical protein ANT_22900 [Anaerolinea thermophila UNI-1] gi|319995545|dbj|BAJ64316.1| hypothetical membrane protein [Anaerolinea thermophila UNI-1] Length = 276 Score = 160 bits (405), Expect = 6e-37, Method: Composition-based stats. Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 22/244 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ--P 394 W I +P ++ Y+ +G NFGIAI+L T+ ++L+ PL Q + M +Q P Sbjct: 2 WDLLIIQPFTNVLLLIYSYLGQNFGIAIILFTLLIRLITHPLMVSQIKGSQKMMELQNHP 61 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-- 452 + EL+EK+K Q LQ+ +L + INP A C P+L+Q P+ +Y+ + ++ Sbjct: 62 RYKELQEKYKND-RQKLQEEQAKLIQELKINPFASCLPLLIQFPIIIGLYQSLYKAMPNT 120 Query: 453 ----MRHAPFWGWIKDLAAADPTNIFTLFGILP----FYLPGFMH-VGIWPIIMSLSMFI 503 + D+ A P N L+ L YLP + + I+++L+ +I Sbjct: 121 PHDLLNLTRILYSFVDINAILPINNQFLWMDLSQPERLYLPFLPFGIPVLAIVVALTTYI 180 Query: 504 QMKM------SPPPADKGQAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q ++ +P + ++N +MP + + + +GL +Y+ SNVI I+Q A++ Sbjct: 181 QGRLITPPPSNPNDQTAMMSGMMNLYMPFLMGYMGLTLASGLSLYFIVSNVIGILQYALL 240 Query: 557 MKMH 560 K++ Sbjct: 241 GKVN 244 >gi|213418901|ref|ZP_03351967.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 246 Score = 160 bits (405), Expect = 6e-37, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 81/263 (30%), Gaps = 35/263 (13%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTMQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVSTANNIELPNS--------NTVWNLISGKILTPTTPIKLVFKNANNILFER 170 Y A+ N + L G+ + + + +A F + Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQ---NELQVPMTYTDAAGNTFTK 163 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIA 222 T Y + +V N + S G++ + T ++ F + G Sbjct: 164 TFVFKRGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAY 223 Query: 223 VLGDKSLVEQKYSDIEKSSISNF 245 D+ + K+ I + N Sbjct: 224 STPDEKYEKYKFDTIADNENLNV 246 >gi|325571080|ref|ZP_08146652.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus casseliflavus ATCC 12755] gi|325156165|gb|EGC68351.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus casseliflavus ATCC 12755] Length = 308 Score = 160 bits (405), Expect = 6e-37, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 111/252 (44%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNI 392 + F+ KP+ +++ N ++G AI+ T+ V+++ PL Q + + M+ + Sbjct: 38 IYRFLVKPLGDMITMLVENFNWSYGWAIIAVTIVVRVIILPLGIHQSRKTMIQSEKMQFL 97 Query: 393 QPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P++D + K++ Q M ++Y +N++ G C P+L+Q+P+F A+Y Sbjct: 98 KPQVDIAQANLKKATTREEQMQAQAEMQKIYSENNVSMFGGIGCLPLLIQMPIFSALYFT 157 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + ++++ F+G ++ DP+ +F + + G++ P Sbjct: 158 ARYTQGIQNSEFFG----VSLGDPSILFVAIAGISYLAQGYISTIGIP------------ 201 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 K +L P++ VF S PAG+ +YW V S +Q + + + + Sbjct: 202 ---EEQKKTMKTMLIVSPLMIVFMSMSAPAGVTLYWVVGGVFSCIQTFITNVIM--KPKI 256 Query: 567 IDRLRSTFSKNY 578 ++ + N Sbjct: 257 RAQVEAEMKANP 268 >gi|116514957|ref|YP_802586.1| hypothetical protein BCc_007 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256811|gb|ABJ90493.1| preprotein translocase, membrane component [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 285 Score = 160 bits (405), Expect = 6e-37, Method: Composition-based stats. Identities = 78/304 (25%), Positives = 145/304 (47%), Gaps = 27/304 (8%) Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 + KY+ + I + L+D + + F + + + Sbjct: 1 MLQKYFFTTRILKYLKLYTFYSHQLNDFFSSF--NFISKLSYFKSYILYNIFSNFLCKLE 58 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + +L+ ++ +G + IA P+F L+++FY N+GIAI+ T+ +K+ Sbjct: 59 MQINLSKISDNLS-----LINRYGKLHIIAYPLFHLLNFFYKFFNNWGIAIIFVTILIKI 113 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 + +PL K QY S MK +QPKID L+ K+ + + + K +++LY + NP + Sbjct: 114 IIYPLTKLQYTSVLQMKLLQPKIDILKNKYADNKDK-MNKKILELYSSKKFNPFNSFFSF 172 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q P+F A Y V+S S+E+++APF+ WIKDL++ DP ++ Sbjct: 173 LIQTPIFLAFYSVLSSSVELKNAPFFLWIKDLSSYDPYHVL------------------- 213 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P++M +S+ + + L++ V F FP+GLI+Y+ SN+++++Q Sbjct: 214 PLLMGISILLTQISEIDDKTTRKRKFLSFFSVFFAAFFLWFPSGLILYYITSNIVTLIQH 273 Query: 554 AVIM 557 I Sbjct: 274 WFIR 277 >gi|258541100|ref|YP_003175599.1| stage III sporulation protein J [Lactobacillus rhamnosus Lc 705] gi|257152776|emb|CAR91748.1| Stage III sporulation protein J [Lactobacillus rhamnosus Lc 705] Length = 278 Score = 160 bits (404), Expect = 7e-37, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 22/244 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + NL G N G+ I+ T+ +++L FPL+ S A + I P++ Sbjct: 38 WDRYVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYLSIKSMAKQQEIAPQL 97 Query: 397 DELREKF--KQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ K + Q L+ +LY + +NP+ GC PI++Q+P A+Y+ I + + Sbjct: 98 KELQKKYSSKDTETQTKLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSL 157 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F +L+ DP I + + +L I M+ P + Sbjct: 158 QSGTFLWM--NLSQPDPLWIMQILA----------------TLFTLGTSILSMMAQPTRN 199 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +++ P + + P+ L IY +N S+VQQ +I ++ R+ Sbjct: 200 SSSWVMMIISPAMIFVFSVTLPSALAIYSVVTNAFSMVQQLLIQNPFKIRREREEKARAE 259 Query: 574 FSKN 577 K Sbjct: 260 KEKE 263 >gi|297592067|gb|ADI46852.1| ALB3_1f [Volvox carteri f. nagariensis] Length = 474 Score = 160 bits (404), Expect = 7e-37, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 26/257 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GW +A + ++ + + ++G +I+L T+ VK++ +PL K+Q ST ++ Sbjct: 105 GWVAPLADVLEQVLYVLKDCLDLLHVPYSYGYSIILLTLIVKIVTYPLTKQQVESTLAVQ 164 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++P++D ++++F + +QK LY+ +NPLAGC P L P+F +Y ++ Sbjct: 165 ALKPRVDLIKDRFGDDK-EKIQKETSILYEQAGVNPLAGCLPTLATTPIFIGLYSSLTNV 223 Query: 451 L--EMRHAPFWGWIKDLAAA----------DPTNIFTLF-GILPFYLPGFMHVGIWPIIM 497 + + WI LA + +F L G + P+++ Sbjct: 224 ANEGLLDTQGFYWIPSLAGPTTLAQRQSGLGTSWLFPLVDGAPAIGWDAAVAYLTLPVLL 283 Query: 498 SLSMFIQMKMSPPPADKG------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 L + + + P +D Q +L +PV+ + + P+GL +Y+ + ++S Sbjct: 284 ILVQYASLYSTGPTSDATDVNARLQRALLLGLPVMIGWFALNVPSGLSLYYLSNTILSTA 343 Query: 552 QQAVIMKMHGAEIGLID 568 QQ + K+ GA++ + Sbjct: 344 QQVYLKKLGGAKVAIKK 360 >gi|154686651|ref|YP_001421812.1| OxaA-like protein precursor [Bacillus amyloliquefaciens FZB42] gi|154352502|gb|ABS74581.1| YqjG [Bacillus amyloliquefaciens FZB42] Length = 278 Score = 160 bits (404), Expect = 7e-37, Method: Composition-based stats. Identities = 62/238 (26%), Positives = 107/238 (44%), Gaps = 22/238 (9%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMK 390 G+F+ ++ P L+ L G +G++I+L T+ V+++ PL Q+ M Sbjct: 40 GFFHDYLIDPFSALLKGVAGLFHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRVFQEKMA 99 Query: 391 NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYK 445 I+P++D ++ K KQ + LQ M++LY+ HN+NP+A GC P+L+Q P+ Y Sbjct: 100 VIKPQVDSIQAKMKQTKDAEKQKELQMEMMKLYREHNLNPMAMGCLPMLVQFPILIGFYY 159 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I + E+ A L +D IL G M+ I L+ Sbjct: 160 AIRSTPEI--ASHSFLWFSLGHSD---------ILVSLCAGAMYFLQAYISQKLNEKYSP 208 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P A + +++ PV+ + PA L +YW S + VQ ++ + H + Sbjct: 209 AAQNPAAMQSAKIMVFIFPVMMTVFSLNVPAALPLYWFTSGLFLTVQNVLLQQTHHKK 266 >gi|237743156|ref|ZP_04573637.1| inner membrane protein oxaA [Fusobacterium sp. 7_1] gi|256027563|ref|ZP_05441397.1| inner membrane protein [Fusobacterium sp. D11] gi|260495364|ref|ZP_05815491.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_33] gi|289765522|ref|ZP_06524900.1| inner membrane protein [Fusobacterium sp. D11] gi|229433452|gb|EEO43664.1| inner membrane protein oxaA [Fusobacterium sp. 7_1] gi|260197142|gb|EEW94662.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_33] gi|289717077|gb|EFD81089.1| inner membrane protein [Fusobacterium sp. D11] Length = 201 Score = 160 bits (404), Expect = 8e-37, Method: Composition-based stats. Identities = 63/220 (28%), Positives = 114/220 (51%), Gaps = 22/220 (10%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +I + + L++ VGNFGI+I++ T+ +K+L PL KQ S MK +QP+++++ Sbjct: 2 SYIRQFLAFLLNTTDKYVGNFGISIIIVTIIIKILLLPLTLKQDKSMKEMKKLQPELEKI 61 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 ++K+ Q+L ++LY+ H +NPL GC PIL+Q+P+ +A++ V+ + + + F Sbjct: 62 KQKYANDK-QMLNIKTMELYREHKVNPLGGCLPILIQLPILWALFGVLRSGIIPKDSSFL 120 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 LA DP I P++ F+Q K+ + + Sbjct: 121 WMR--LADPDPFYIL-------------------PVLNGAVSFLQQKLMGTSDNAQMKNM 159 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + P++ + P+GL IYW S++I+++QQ IMK Sbjct: 160 MYVFPIMMIVISYKMPSGLQIYWLTSSLIAVIQQYFIMKK 199 >gi|145597099|ref|YP_001161396.1| 60 kDa inner membrane insertion protein [Salinispora tropica CNB-440] gi|145306436|gb|ABP57018.1| 60 kDa inner membrane insertion protein [Salinispora tropica CNB-440] Length = 370 Score = 160 bits (404), Expect = 8e-37, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 26/226 (11%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + +AI+ V V+++ FP+ KQ S M+ +QP++ L+EK K + LQK M++LY Sbjct: 37 WILAIIFLVVTVRVILFPVFVKQIKSQRAMQALQPQVKALQEKHKGD-RETLQKEMMELY 95 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF---WGWIKD------LAAADP 470 + NPL GC P+ LQIPVF ++ V+ + +GW D +A Sbjct: 96 RKEKANPLMGCLPMFLQIPVFLGLFHVLRRLNPNKDESGKTLYGWTVDQFDSVSVAKLFT 155 Query: 471 TNIFTLFGILPFYLPGF--------MHVGIWPIIMSLSMFIQMKMS--------PPPADK 514 I FG P L + GI ++M + ++ + P Sbjct: 156 APIAGKFGSSPEELAALGADGTTVKIMAGILVLLMMGTTYLTSRQMILKTGWAEDPQQRM 215 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 Q ++L +P + + + FP G+IIYW +N+ ++ QQ +++ Sbjct: 216 IQRLMLYGIPASLLISGAIFPIGVIIYWVTNNLFTLAQQQWVLRKF 261 >gi|332360026|gb|EGJ37840.1| stage III sporulation protein J [Streptococcus sanguinis SK1056] Length = 271 Score = 159 bits (403), Expect = 9e-37, Method: Composition-based stats. Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 22/224 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G++ + + + + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP Sbjct: 31 YGFWEKLVYFFADTIRFL-SFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPH 89 Query: 396 IDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 I +L+EK+ + L + +LYK +NP A P+ +Q+PV A+++ ++ Sbjct: 90 IKQLQEKYPGKDMESRTALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDF 149 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 M+ +L A DPT I L L + ++ P Sbjct: 150 MKTG--HFLWLNLGATDPTFILPLLAALFTFFSTWLSNKALP----------------ER 191 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + G +++ MPVV F +G+ +YW+ SN +VQ ++ Sbjct: 192 NGGMTVMMYLMPVVIFFFALYAASGVALYWAVSNAYQVVQTLLL 235 >gi|306834432|ref|ZP_07467546.1| stage III sporulation protein J [Streptococcus bovis ATCC 700338] gi|304423418|gb|EFM26570.1| stage III sporulation protein J [Streptococcus bovis ATCC 700338] Length = 271 Score = 159 bits (403), Expect = 9e-37, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 38/253 (15%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF AK + L ++ G G+ I+L T+ ++ + PL Q S M+++Q Sbjct: 33 GWDQIVYFFAKAIQWL-----SINGRIGVGIVLFTIIIRAIMMPLYNMQIKSGQKMQDLQ 87 Query: 394 PKIDELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ +L+EK+ L + LYK + +NP A P+++Q+P+ A+Y+ ++ Sbjct: 88 PELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVVQLPILMALYQALTRV 147 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 ++ F +L+ DP I P++ +L F+ ++ Sbjct: 148 AFLKTGTFLWI--ELSKPDPYFIL-------------------PVLAALFTFLSSWLTNK 186 Query: 511 PADKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 A + ++ MP++ F +G+++YWS S + Q ++ + Sbjct: 187 AAREKNIAMTVMTYVMPIMIFFMSFRLASGVVLYWSVSYAFQVFQILLLNNPFKI---IA 243 Query: 568 DRLRSTFSKNYNS 580 RL ++ S Sbjct: 244 KRLEEEQAEKERS 256 >gi|257452994|ref|ZP_05618293.1| inner membrane protein [Fusobacterium sp. 3_1_5R] gi|257466625|ref|ZP_05630936.1| inner membrane protein [Fusobacterium gonidiaformans ATCC 25563] gi|315917780|ref|ZP_07914020.1| inner membrane protein oxaA [Fusobacterium gonidiaformans ATCC 25563] gi|317059534|ref|ZP_07924019.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_5R] gi|313685210|gb|EFS22045.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_5R] gi|313691655|gb|EFS28490.1| inner membrane protein oxaA [Fusobacterium gonidiaformans ATCC 25563] Length = 205 Score = 159 bits (403), Expect = 9e-37, Method: Composition-based stats. Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 22/216 (10%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + L+ N+V NFGI+I++ T+ V+++ PL KQ S MK IQP+++ L+EK+ Sbjct: 12 ISSLLLSVDNVVQNFGISIIIATIIVRIILLPLTLKQDKSMKAMKKIQPELEILKEKYGN 71 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q+L + ++LY+ H +NP GC P+L+Q+P+ FA++ V+ + + + W++ L Sbjct: 72 DK-QLLNQKTMELYQKHKVNPAGGCLPLLVQLPILFALFGVLRGGI-IPEDSKFLWLE-L 128 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 DP IF P++ F Q K+ + ++ P+ Sbjct: 129 TKPDPFYIF-------------------PLLNGAISFFQQKLMGNSDNPQMKNMMYMFPI 169 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + +F P GL +YW S++ +++QQ IMK Sbjct: 170 MMIFISYKMPGGLQLYWLTSSLTAVLQQYFIMKKGD 205 >gi|294623037|ref|ZP_06701926.1| membrane protein OxaA 2 [Enterococcus faecium U0317] gi|291597593|gb|EFF28755.1| membrane protein OxaA 2 [Enterococcus faecium U0317] Length = 316 Score = 159 bits (403), Expect = 1e-36, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 108/251 (43%), Gaps = 32/251 (12%) Query: 342 IAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPKI 396 + PM ++Y N ++G A++ TV V+++ PL Q + + M+ ++P++ Sbjct: 42 LVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQV 101 Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++K K + Q M Q+Y+ + ++ G C P+L+Q+P+F A+Y + Sbjct: 102 EAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYT 161 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +R + F+G DL + P+ + + + L G++ P Sbjct: 162 EGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGIP---------------E 202 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 K +L P + VF S PAG+ +YW V S +Q + M + L ++ Sbjct: 203 EQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQV 260 Query: 571 RSTFSKNYNSQ 581 KN Q Sbjct: 261 AEELKKNPPKQ 271 >gi|125718923|ref|YP_001036056.1| membrane protein (preprotein translocase) oxaA 1 precursor [Streptococcus sanguinis SK36] gi|323350582|ref|ZP_08086244.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis VMC66] gi|125498840|gb|ABN45506.1| Membrane protein (preprotein translocase) oxaA 1 precursor, putative [Streptococcus sanguinis SK36] gi|322123264|gb|EFX94949.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis VMC66] gi|324992539|gb|EGC24460.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK405] gi|324995932|gb|EGC27843.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK678] gi|325697377|gb|EGD39263.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK160] gi|327488846|gb|EGF20645.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK1058] Length = 271 Score = 159 bits (403), Expect = 1e-36, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 22/223 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G++ + + + + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I Sbjct: 32 GFWEKLVYFFADTIRFL-SFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHI 90 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ + L + +LYK +NP A P+ +Q+PV A+++ ++ M Sbjct: 91 KRLQEKYPGKDMESRTALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDFM 150 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +L A DPT I L L + ++ P + Sbjct: 151 KTG--HFLWLNLGATDPTFILPLLAALFTFFSTWLSNKALP----------------ERN 192 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 G +++ MPVV F +G+ +YW+ SN +VQ ++ Sbjct: 193 GGMTVMMYLMPVVIFFFALYAASGVALYWAVSNAYQVVQTLLL 235 >gi|303274404|ref|XP_003056523.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] gi|226462607|gb|EEH59899.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] Length = 511 Score = 159 bits (403), Expect = 1e-36, Method: Composition-based stats. Identities = 61/227 (26%), Positives = 114/227 (50%), Gaps = 18/227 (7%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G +I+ TT VK L +P K Q S NM+N+QP+++ +REK++ Q + + +LY+ Sbjct: 148 GSSIIFTTFVVKALTYPFTKVQVESALNMQNLQPQVNAVREKYRDDQEQ-MNIEINRLYE 206 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 + ++PLAGC P+LL +PV + +Y+ + S++ W +I LA P Sbjct: 207 DNQVSPLAGCGPLLLTLPVVWGLYRAFNNASIDGSFDEPWFFIPSLAGPTPDRSLAWLLP 266 Query: 480 LP--FYLPGFMHVGIW----PIIMSLSMFIQMKMSPPPAD---------KGQAMILNWMP 524 L + P H PI+ S ++ M + P D + Q+ +LN++P Sbjct: 267 LDDNYQPPLGWHDASLYLVVPILTVASQYVSMSILSPVKDLNDPNTAETEQQSFLLNFLP 326 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 + + + PAGL +YW ++N+ + Q + + G + +++++ Sbjct: 327 LFIGYISLTVPAGLTLYWLFNNIFTTATQVYL-RQGGGAVAKVEKIK 372 >gi|291004516|ref|ZP_06562489.1| putative inner membrane protein translocase component YidC [Saccharopolyspora erythraea NRRL 2338] Length = 350 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 103/271 (38%), Gaps = 33/271 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F FI P+ ++ +++ + G + +++ ++++ A Q + M Sbjct: 2 FDFILYPVSAILWFWHKIFGFVLGPDNGFAWALSVFFLVFSLRVVLLKPAISQMRAGRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + P+I +LREK K Q + + M +L H +NPL GC P LLQIPVF +++ V+ Sbjct: 62 QKFAPQIQKLREKHKND-RQRMAQEMQKLQSEHGVNPLGGCLPALLQIPVFLSLFTVLRD 120 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTL------------FGILPFYLPGFMHVG-IWPII 496 + + + + +IF + + VG II Sbjct: 121 FKPGAPSNYIFDADGVRSFVEADIFGAKLSNWIVQSDQELALFGTTRTDMIMVGVPLMII 180 Query: 497 MSLSMFIQMK----------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 S++ F M+ M+ P +++ PV + + P +++YW +N Sbjct: 181 ASVATFFSMRISMKRQTEAAMANPQTAMMGKLMMYIAPVGAIVSGPFLPIAVLLYWMANN 240 Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 ++ Q + E K Sbjct: 241 FWTLGQAHFLTNKIDREEQKAKEAEIAAKKE 271 >gi|288906262|ref|YP_003431484.1| hypothetical protein GALLO_2078 [Streptococcus gallolyticus UCN34] gi|306832308|ref|ZP_07465462.1| stage III sporulation protein J [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325979273|ref|YP_004288989.1| hypothetical protein SGGBAA2069_c20730 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732988|emb|CBI14569.1| conserved hypothetical membrane protein [Streptococcus gallolyticus UCN34] gi|304425747|gb|EFM28865.1| stage III sporulation protein J [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325179201|emb|CBZ49245.1| unnamed protein product [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 271 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 109/253 (43%), Gaps = 38/253 (15%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF AK + L ++ G G+ I+L T+ ++ + PL Q S M+++Q Sbjct: 33 GWDQIVYFFAKAIQWL-----SINGRIGVGIVLFTIIIRAIMMPLYNMQIKSGQKMQDLQ 87 Query: 394 PKIDELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ +L+EK+ L + LYK + +NP A P+++Q+P+ A+Y+ ++ Sbjct: 88 PELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVVQLPILMALYQALTRV 147 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 ++ F +L+ DP I P++ +L F+ ++ Sbjct: 148 AFLKTGTFLWI--ELSKPDPYFIL-------------------PVLAALFTFLSSWLTNK 186 Query: 511 PADKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 A + ++ MP++ F +G+++YWS S + Q ++ + Sbjct: 187 AAREKNIAMTVMTYVMPIMIFFMSFRLASGVVLYWSVSYAFQVFQILLLNNPFKI---IA 243 Query: 568 DRLRSTFSKNYNS 580 RL ++ + Sbjct: 244 KRLEEEQAEKERA 256 >gi|168187281|ref|ZP_02621916.1| membrane protein OxaA [Clostridium botulinum C str. Eklund] gi|169294774|gb|EDS76907.1| membrane protein OxaA [Clostridium botulinum C str. Eklund] Length = 246 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 28/251 (11%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNF------------GIAIMLTTVFVKLLFFPLAKKQ 382 ++G +F + F+ ++ N+ G+ I++ T+ ++L+ FPL KQ Sbjct: 7 NYGLAFFSINWLNNAFIQFFQVMHNWVHSVVTNPNISYGLTIIIVTIIIRLVLFPLNYKQ 66 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 S M IQP++ +L+ K+K P Q Q+ M++LYK + +NPL GC P+L+Q P+ A Sbjct: 67 IKSQVAMNEIQPELKKLQNKYKNDP-QKQQQEMMKLYKEYGVNPLGGCLPLLIQWPILIA 125 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y V S ++ + L +P P + I P++ L + Sbjct: 126 LYYVFSNLSKIDPSISNVTFLGLKLMNPA----------VLSPSQWYTWILPLLSGLLTY 175 Query: 503 IQMKMSP-----PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + M K M+ +M + + F L++YW +++ I Q V Sbjct: 176 LSTAMMTSKNADSAQVKQTRMMSGFMTLFITYMSFKFSTALVLYWVTNSLFQIGQTLVTQ 235 Query: 558 KMHGAEIGLID 568 + + Sbjct: 236 HSQNKKKEEVK 246 >gi|76787291|ref|YP_329128.1| membrane protein oxaA [Streptococcus agalactiae A909] gi|77407082|ref|ZP_00784085.1| SpoIIIJ family protein [Streptococcus agalactiae H36B] gi|76562348|gb|ABA44932.1| membrane protein oxaA, putative [Streptococcus agalactiae A909] gi|77174313|gb|EAO77179.1| SpoIIIJ family protein [Streptococcus agalactiae H36B] Length = 271 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 99/212 (46%), Gaps = 27/212 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 + + + G+ I+L T+ ++ + PL Q S+ M+ IQP++ EL++K+ P Sbjct: 46 QWLSFNHSIGLGIILFTLIIRAIMMPLYNMQMKSSQKMQEIQPRLKELQKKYPGKDPDSR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L M +YK +NP A P+L+Q+PV +A+++ ++ ++ F +L+ Sbjct: 106 LKLNDEMQSMYKAEGVNPYASVLPLLIQLPVLWALFQALTRVSFLKVGTFLSL--ELSQP 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ---AMILNWMPV 525 DP I P++ +L F+ ++ A + ++ MP+ Sbjct: 164 DPYYIL-------------------PVLAALFTFLSTWLTNKAAVEKNIALTLMTYVMPL 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + +F +G+++YW+ SN + Q ++ Sbjct: 205 IILVTSFNFASGVVLYWTVSNAFQVFQILLLN 236 >gi|332365878|gb|EGJ43635.1| stage III sporulation protein J [Streptococcus sanguinis SK355] Length = 271 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 22/223 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G++ + + + + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I Sbjct: 32 GFWEKLVYFFADTIRFL-SFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHI 90 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ + L + +LYK +NP A P+L+Q+PV A+++ ++ +E Sbjct: 91 KRLQEKYPGKDMESRTALAEETQKLYKEMGVNPYASFIPLLIQMPVLLALFQALTR-VEF 149 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + W+ +L A DPT I L L + ++ P + Sbjct: 150 MKTGHFLWL-NLGATDPTFILPLLAALFTFFSTWLSNKALP----------------ERN 192 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 G +++ MPVV F +G+ +YW+ SN +VQ ++ Sbjct: 193 GGMTVMMYLMPVVIFFFALYAASGVALYWAVSNAYQVVQTLLL 235 >gi|69247382|ref|ZP_00604326.1| 60 kDa inner membrane protein [Enterococcus faecium DO] gi|68194854|gb|EAN09327.1| 60 kDa inner membrane protein [Enterococcus faecium DO] Length = 308 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 32/251 (12%) Query: 342 IAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPKI 396 + PM ++Y N ++G A++ TV V+++ PL Q + + M+ ++P++ Sbjct: 41 LVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQV 100 Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++K K + Q M Q+Y+ + ++ G C P+L+Q+P+F A+Y + Sbjct: 101 EAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYT 160 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +R + F+G DL + P+ + + + L G++ P Sbjct: 161 EGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGIP---------------E 201 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 K +L P + VF S PAG+ +YW V S +Q + M + L ++ Sbjct: 202 EQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQV 259 Query: 571 RSTFSKNYNSQ 581 +N Q Sbjct: 260 AEELKQNPPKQ 270 >gi|320547570|ref|ZP_08041855.1| ParB/SpoJ family partitioning protein [Streptococcus equinus ATCC 9812] gi|320447645|gb|EFW88403.1| ParB/SpoJ family partitioning protein [Streptococcus equinus ATCC 9812] Length = 271 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 35/230 (15%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF AK + L ++ G G+ I+L T+ ++ + PL Q S+ M+++Q Sbjct: 33 GWEQIVYFFAKAIQWL-----SINGRIGVGIILFTIIIRAILMPLFNMQIKSSQKMQDLQ 87 Query: 394 PKIDELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ +L+EK+ L + LYK + +NP A P+++Q+P+ A+Y+ ++ Sbjct: 88 PELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVIQLPILMALYQALTRV 147 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 ++ F +L+ DP I P++ + F+ +S Sbjct: 148 AFLKTGTFLWI--ELSQPDPYYIL-------------------PVLAAFFTFLSTWLSNK 186 Query: 511 PA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 A + M+ MP++ F +G+++YWS S + Q V+ Sbjct: 187 AAREKNMAMTMMTYVMPIMIFFLAFRLASGVVLYWSVSYAFQVFQVLVLN 236 >gi|302531354|ref|ZP_07283696.1| preprotein translocase YidC subunit [Streptomyces sp. AA4] gi|302440249|gb|EFL12065.1| preprotein translocase YidC subunit [Streptomyces sp. AA4] Length = 375 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 102/260 (39%), Gaps = 42/260 (16%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ ++ + G ++ + I+ T V+ + F Q S M Sbjct: 2 LDFIYYPVSFILWCWHKVFGFVFGEATAISWILGIIFLTFTVRGIMFKPFVNQVRSMKKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ P++ ++++K+ Q + M +L + H +NPL C P++LQIPVF + V+ Sbjct: 62 QDFAPEMKKIQKKYAND-RQRQAQEMQKLQREHGVNPLGSCLPMILQIPVFIGLNHVLRA 120 Query: 450 SL------EMRHAPFWGWIKDLAAADPTNIFTL-----------------------FGIL 480 + ++ D+ + +F + + +L Sbjct: 121 FTMPPAGGGPKTENYFFNEHDVNSYVSAKLFGVNMGEAVNNGVGAVAGHVANGGWHWEVL 180 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFALSSFPAG 537 P LP + I + + + S P + + P+ + + FP G Sbjct: 181 PVALPLMIIASIATHLTARHSVSRQNASAAGTPQTAIMNKLTMYVFPLGVLVFGAFFPLG 240 Query: 538 LIIYWSWSNVISIVQQAVIM 557 L+ YW +N +++QQ ++ Sbjct: 241 LLFYWLANNGWTLMQQRLVY 260 >gi|251799884|ref|YP_003014615.1| hypothetical protein Pjdr2_5925 [Paenibacillus sp. JDR-2] gi|247547510|gb|ACT04529.1| 60 kDa inner membrane insertion protein [Paenibacillus sp. JDR-2] Length = 272 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 31/235 (13%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMK 390 G+F +++ P L+ + + G ++G+A+++ T+ V+++ PL +QY M Sbjct: 41 GFFNHYVVFPFSYLIQHIASFFGDSYGMAVIVMTLLVRIVLLPLMLRQYKGQQGMKQKMS 100 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKV 446 IQP++++L+EK+K+ P+ LQK ++LY H NP+A GC P+L+Q+P+ +Y Sbjct: 101 VIQPELNKLKEKYKEKTPENQAKLQKETMELYSKHQFNPMAIGCLPMLIQMPILTGLYYA 160 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 I ++ E+ F + L D ILPF +V F + Sbjct: 161 IKMTPELAQHSFLWF--QLGTPDH--------ILPFLAAAIYYV----------QFRVSQ 200 Query: 507 MSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + A + Q +L + PV+ S PA + +YW I+Q V K++ Sbjct: 201 IGMDSAQQKQMAMLGLLSPVMMGIFSFSAPAAVPLYWVVGGTFMIIQTLVSKKLY 255 >gi|218658398|ref|ZP_03514328.1| putative inner membrane protein translocase component YidC [Rhizobium etli IE4771] Length = 125 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 69/121 (57%), Positives = 93/121 (76%) Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F+GWIKDL+A DPT I LFG+LPF P +H+G+WP+IM ++MF+QM+M+P P D QA Sbjct: 1 FFGWIKDLSAPDPTTIVNLFGLLPFEGPALLHLGVWPLIMGITMFVQMRMNPTPPDPTQA 60 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MI NWMP+VF+F L+SFPAGL+IYW+W+N +S+ QQ +IMK HG +I L D L+ F + Sbjct: 61 MIFNWMPLVFMFMLASFPAGLVIYWAWNNTLSVAQQGLIMKRHGVKIELFDNLKGMFRRK 120 Query: 578 Y 578 Sbjct: 121 P 121 >gi|327462709|gb|EGF09031.1| stage III sporulation protein J [Streptococcus sanguinis SK1057] Length = 271 Score = 159 bits (401), Expect = 2e-36, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 100/223 (44%), Gaps = 22/223 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G++ + + + + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I Sbjct: 32 GFWEKLVYFFADTIRFL-SFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHI 90 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ + L + +LYK +NP A P+ +Q+PV A+++ ++ M Sbjct: 91 KRLQEKYPGKDMESRTALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDFM 150 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +L A DPT I L L +L ++ P + Sbjct: 151 KTG--HFLWLNLGATDPTFILPLLAALFTFLSTWLSNKALP----------------ERN 192 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 G +++ +PV+ F +G+ +YW+ SN +VQ ++ Sbjct: 193 GGMTVMMYLLPVMIFFFALYAASGVALYWAVSNAYQVVQTLLL 235 >gi|229082700|ref|ZP_04215147.1| Membrane protein oxaA 1 [Bacillus cereus Rock4-2] gi|228700612|gb|EEL53151.1| Membrane protein oxaA 1 [Bacillus cereus Rock4-2] Length = 178 Score = 159 bits (401), Expect = 2e-36, Method: Composition-based stats. Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 27/185 (14%) Query: 379 AKKQYVSTANMKNIQPKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 KQ ST M+ +QP++ +L+EK+ Q+ Q LQ+ M+QLY+ + +NPLAGC PI + Sbjct: 1 MIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFI 60 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+P+ FA Y I + E++ F + DL ADP I P+ Sbjct: 61 QMPILFAFYHAIMRTAEIKQHSFLWF--DLGHADPFYIL-------------------PV 99 Query: 496 IMSLSMFIQMKMSP---PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + +++ FIQ K++ + AM+L MP++ + +FPA L +YW N+ I Q Sbjct: 100 VAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQ 159 Query: 553 QAVIM 557 I Sbjct: 160 MYFIK 164 >gi|239616662|ref|YP_002939984.1| 60 kDa inner membrane insertion protein [Kosmotoga olearia TBF 19.5.1] gi|239505493|gb|ACR78980.1| 60 kDa inner membrane insertion protein [Kosmotoga olearia TBF 19.5.1] Length = 445 Score = 159 bits (401), Expect = 2e-36, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 128/268 (47%), Gaps = 25/268 (9%) Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIP---RFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 S T FAG + I ++ E G+ +I + + + Y L Sbjct: 183 NSGRATISAFAGPVKLIHISEAFPEIYEEIKKDLEEFGAIGFTSYIFHGLVAFLYWLYKL 242 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +FG AI+L T+ V+L+ +PL Q S M+ +QP+I+++++K+K PQ Q+A+ Sbjct: 243 TKSFGWAIILFTIVVRLVLYPLYHLQTKSMIQMRAVQPEIEKIKKKYKD--PQKQQQALT 300 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNIFT 475 +LY+ NINP GC +L+Q+PVFF +Y VI EM ++P + DL+ + Sbjct: 301 KLYREKNINPATGCLTLLIQLPVFFVLYAVIRYFGEMFAYSPKFLIWSDLSTG--GFVIN 358 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 L I+ L GF ++ + S P Q MI N M F F SFP Sbjct: 359 LPFIIITILAGF--------------YMSLFTSQDPRAARQGMIFNVM---FPFLFYSFP 401 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +GL +Y++ + VI ++ + + G + Sbjct: 402 SGLFLYYTTNTVIQMLITIYVYRKFGIK 429 >gi|257879967|ref|ZP_05659620.1| inner membrane protein [Enterococcus faecium 1,230,933] gi|257814195|gb|EEV42953.1| inner membrane protein [Enterococcus faecium 1,230,933] Length = 309 Score = 159 bits (401), Expect = 2e-36, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 32/251 (12%) Query: 342 IAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPKI 396 + PM ++Y N ++G A++ TV V+++ PL Q + + M+ ++P++ Sbjct: 42 LVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQV 101 Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++K K + Q M Q+Y+ + ++ G C P+L+Q+P+F A+Y + Sbjct: 102 EAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYT 161 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +R + F+G DL + P+ + + + L G++ P Sbjct: 162 EGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGIP---------------E 202 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 K +L P + VF S PAG+ +YW V S +Q + M + L ++ Sbjct: 203 EQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQV 260 Query: 571 RSTFSKNYNSQ 581 +N Q Sbjct: 261 AEELKQNPPKQ 271 >gi|311065163|ref|YP_003971889.1| inner membrane insertion protein [Bifidobacterium bifidum PRL2010] gi|310867483|gb|ADP36852.1| Inner membrane insertion protein [Bifidobacterium bifidum PRL2010] Length = 309 Score = 159 bits (401), Expect = 2e-36, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 109/267 (40%), Gaps = 33/267 (12%) Query: 346 MFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 M +M F+ + ++ +AI+ + V P+ KQ S M+ +QPK+ Sbjct: 1 MTQVMVLFHKFLTLLGMAPIGISWVLAIVFLVLVVHACILPIYLKQMKSMRKMQALQPKM 60 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 ++ K+K Q + + M++LY+ ++ NP+ CW ++Q PVF ++ ++S Sbjct: 61 QHIQNKYKGKKDQASKEAMSREMMKLYQDNDANPMGSCWTAVIQGPVFMCMFYMLSAIPY 120 Query: 453 MRHAPFW-GWIKDLAAADPTNIFTLFGILPFYL------PGFMHVGIWPIIMSLSMFIQM 505 + D A A +FG+ G + +G + ++M M+ Sbjct: 121 IATGKRGALGAFDQATAKQFAQTRVFGVSVTDTFGTANNSGKVVIGFFILLMCACMWYMQ 180 Query: 506 -----KMSPPPAD-----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 K P + K Q + P++++F+ FP +++YW +N ++ + Sbjct: 181 FNNMRKNLPKASMQGSTYKMQQAMTWGFPIMYIFSGIMFPFAVLVYWLTNNACNLARSLF 240 Query: 556 -IMKM--HGAEIGLIDRLRSTFSKNYN 579 + K G+ +R +N Sbjct: 241 QVYKFPTPGSRAAEEKEIRDHRQENAR 267 >gi|168702122|ref|ZP_02734399.1| hypothetical protein GobsU_21520 [Gemmata obscuriglobus UQM 2246] Length = 845 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 90/520 (17%), Positives = 190/520 (36%), Gaps = 91/520 (17%) Query: 127 VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN----ILFERTISLDE-HYLFK 181 NN + T W ++S K P ++VF+ + +T +L Y Sbjct: 223 TPDDNNPDPLLGETNWTVVSEKRPADG-PHEVVFEKELGEPYFVKIRKTYTLARTDYHIG 281 Query: 182 IVDTVTN---NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG---DKSLVEQKYS 235 + + + + + ++ + + +A++G + ++Y Sbjct: 282 LHVGIEKLKVPGAAKGKGQLKYQLSGPRGLPIEGEWYTSTYRVAIVGWRERNGTLRRQYE 341 Query: 236 DIEK-------SSISNFHESNSWLGISDKYWASVFI------------------PSKETS 270 D + ++ ++++++AS + E Sbjct: 342 DAASIGSKRGGEKARREDNTFHYMAVANQFFASAVAIDYSADEAKKTHPWSYVRATTELP 401 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH----------- 319 + + ++ I + PG+S F++ G + + Sbjct: 402 LDKKQDPQMPNFDDITVRAASETIDLEPGQSTAHRYFIYNGPAKVGLLKLLPKVEVNGQK 461 Query: 320 ----------------------HYEKDLAIPRFEMLIDWGWFYF-IAKPMFMLMSYFYNL 356 + D AI RF I W + M +L++ +++ Sbjct: 462 VPAVREELVDQYKDTMMMSSITDFRSDTAIGRFASFIFWTDLVIAMTNLMHILLAAIHSV 521 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM----KNIQPKIDELREKFKQSPPQVLQ 412 +G++ ++I++ TV V+L+ ++KQ + M K +QP+ ++L+EK+K Sbjct: 522 LGHWALSIVMLTVCVRLVLMYPSRKQTAMSMKMMEVQKRLQPEFEKLQEKYKDDFN-TYN 580 Query: 413 KAMIQLYKTHNINPL---AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +L + NP GC + Q+PV +Y + S+ R + WI +LAA D Sbjct: 581 REKTRLMMANGANPFAMAGGCLLLFAQMPVMMGLYFCLQESIFFRLDS-FLWIDNLAAPD 639 Query: 470 PTNIFTL---FGILPFYLPGFMHVGIW----PIIMSLSMFIQM-KMSPPPADK---GQAM 518 +T + P + F+++G + P++ M Q KM PP D Q M Sbjct: 640 MLKWWTEQIPYVSTPDDIGSFIYLGPYFNLLPLLAVGLMLFQQSKMMPPATDPQAEQQRM 699 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ M ++ AGL +Y+ S +I+++ +I K Sbjct: 700 MMKLMMIMMAVFFYKVAAGLALYFIVSTAWAIIERQLIPK 739 >gi|260558940|ref|ZP_05831127.1| inner membrane protein [Enterococcus faecium C68] gi|293559780|ref|ZP_06676300.1| membrane protein OxaA 2 [Enterococcus faecium E1162] gi|314950195|ref|ZP_07853480.1| putative OxaA-like protein [Enterococcus faecium TX0082] gi|260075048|gb|EEW63363.1| inner membrane protein [Enterococcus faecium C68] gi|291606263|gb|EFF35677.1| membrane protein OxaA 2 [Enterococcus faecium E1162] gi|313643505|gb|EFS08085.1| putative OxaA-like protein [Enterococcus faecium TX0082] Length = 316 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 109/251 (43%), Gaps = 32/251 (12%) Query: 342 IAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPKI 396 + PM ++Y N ++G A++ TV V+++ PL Q + + M+ ++P++ Sbjct: 42 LVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQV 101 Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++K K + Q M Q+Y+ + ++ G C P+L+Q+P+F A+Y + Sbjct: 102 EAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYT 161 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +R + F+G DL + P+ + + + + L G++ P Sbjct: 162 EGIRESSFYGI--DLGS--PSMVLVVIAGVAYLLQGYISTIGIP---------------E 202 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 K +L P + VF S PAG+ +YW V S +Q + M + L ++ Sbjct: 203 EQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQV 260 Query: 571 RSTFSKNYNSQ 581 +N Q Sbjct: 261 AEELKQNPPKQ 271 >gi|222153767|ref|YP_002562944.1| membrane protein OxaA 1 [Streptococcus uberis 0140J] gi|222114580|emb|CAR43555.1| membrane protein OxaA 1 precursor [Streptococcus uberis 0140J] Length = 270 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 29/227 (12%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF AK + L + G+ GI I+L T+ +++L PL Q S+ M++IQ Sbjct: 32 GWDQLVYFFAKSVQWL-----SFNGSIGIGIILFTLLIRILLMPLFNMQMKSSQKMQDIQ 86 Query: 394 PKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ +L+ K+ L + LYK H +NP A P+L+Q+PV A+++ ++ Sbjct: 87 PELKKLQMKYPGKDTESRMALAEESQALYKAHGVNPYASMLPLLIQMPVMIALFQALTRV 146 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 ++ LA DP I + + +L ++ ++ Sbjct: 147 PFLKTGT--FMWVSLAQHDPYFILPVLAAVLTFLSTWL----------------TNLAAR 188 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ MP++ +G+++YW SN + Q ++ Sbjct: 189 EKNVVMTIMTYMMPIMIFLMGFKLASGVVLYWVVSNAFQVFQLLLLN 235 >gi|299117626|emb|CBN75468.1| Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus siliculosus] Length = 449 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 118/242 (48%), Gaps = 26/242 (10%) Query: 349 LMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 ++ ++++ + +GI+I+ T+FVK + FPL +Q ST M+ + PK+ EL+ + Sbjct: 119 AITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQAR 178 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAPFWGW 461 + +P + +A+ QLY+T N+NPLAGC P L QIP+F ++Y+ +++++ E + + W Sbjct: 179 YANNP-EAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLW 237 Query: 462 IKDLAAAD----PTNIFTLF-----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 I L PT + + G + PII+ ++ I ++ P Sbjct: 238 IPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAK 297 Query: 513 DKGQ---------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D Q I+ ++P++ + S P+ L +YW +N IS I E Sbjct: 298 DPSQPVDESQAASQNIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIADE 357 Query: 564 IG 565 G Sbjct: 358 TG 359 >gi|25010517|ref|NP_734912.1| hypothetical protein gbs0444 [Streptococcus agalactiae NEM316] gi|77414752|ref|ZP_00790879.1| SpoIIIJ family protein [Streptococcus agalactiae 515] gi|38503014|sp|Q8E6W4|OXAA1_STRA3 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|23094870|emb|CAD46088.1| Unknown [Streptococcus agalactiae NEM316] gi|77159202|gb|EAO70386.1| SpoIIIJ family protein [Streptococcus agalactiae 515] gi|319744392|gb|EFV96751.1| ParB/SpoJ family partitioning protein [Streptococcus agalactiae ATCC 13813] Length = 271 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 98/212 (46%), Gaps = 27/212 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 + + + G+ I+L T+ ++ + PL Q S+ M+ IQP++ EL++K+ P Sbjct: 46 QWLSFNHSIGLGIILFTLIIRAIMMPLYNMQMKSSQKMQEIQPRLKELQKKYPGKDPDSR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L M +YK +NP A P+L+Q+PV +A+++ ++ ++ F +L+ Sbjct: 106 LKLNDEMQSMYKAEGVNPYASVLPLLIQLPVLWALFQALTRVSFLKVGTFLSL--ELSQP 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ---AMILNWMPV 525 DP I P++ +L F+ ++ A + ++ MP Sbjct: 164 DPYYIL-------------------PVLAALFTFLSTWLTNKAAVEKNIALTLMTYVMPF 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + +F +G+++YW+ SN + Q ++ Sbjct: 205 IILVTSFNFASGVVLYWTVSNAFQVFQILLLN 236 >gi|327460763|gb|EGF07098.1| stage III sporulation protein J [Streptococcus sanguinis SK1] gi|328944626|gb|EGG38787.1| stage III sporulation protein J [Streptococcus sanguinis SK1087] Length = 271 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 100/223 (44%), Gaps = 22/223 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G++ + + + + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I Sbjct: 32 GFWEKLVYFFADTIRFL-SFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHI 90 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ + L + +LYK +NP A P+ +Q+PV A+++ ++ M Sbjct: 91 KQLQEKYPGKDMESRTALAEETQKLYKEMGVNPYASFIPLFIQMPVLLALFQALTRVDFM 150 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +L A DPT I L L + ++ P + Sbjct: 151 KTG--HFLWLNLGATDPTFILPLLAALFTFFSTWLSNKALP----------------ERN 192 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 G +++ MPV+ F +G+ +YW+ SN +VQ ++ Sbjct: 193 GGMTVMMYLMPVMIFFFALYAASGVALYWAVSNAYQVVQTLLL 235 >gi|257869607|ref|ZP_05649260.1| inner membrane protein [Enterococcus gallinarum EG2] gi|257803771|gb|EEV32593.1| inner membrane protein [Enterococcus gallinarum EG2] Length = 306 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 112/252 (44%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNI 392 + F+ KP+ L++ N ++G AI+ T+ V+L+ PL Q + + M+ + Sbjct: 35 IYRFLVKPLGNLITMLVENFDWSYGWAIIAVTIVVRLIILPLGIHQSKKTMIQSEKMQFL 94 Query: 393 QPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P++D + K++ + Q M ++Y +N++ G C P+L+Q+P+F A+Y Sbjct: 95 KPQVDIAQANLKKATTREEQMQAQADMQKIYSENNVSMFGGIGCLPLLIQMPIFSALYFT 154 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + ++++ F+G ++ P+ +F + + + G++ P Sbjct: 155 ARYTQGIQNSEFFG----ISLGQPSFLFVAIAGISYLIQGYISTIGIP------------ 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 K +L P++ VF S PAG+ +YW V S +Q + + + + Sbjct: 199 ---EEQKKTMKTMLIVSPLMIVFMSLSAPAGVTLYWVVGGVFSCLQTFITNVIM--KPKI 253 Query: 567 IDRLRSTFSKNY 578 ++ + N Sbjct: 254 RAQVEAEMKANP 265 >gi|325695448|gb|EGD37348.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK150] Length = 271 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 100/223 (44%), Gaps = 22/223 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G++ + + + + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I Sbjct: 32 GFWEKLVYFFADTIRFL-SFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHI 90 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ + L + +LYK +NP A P+ +Q+PV A+++ ++ M Sbjct: 91 KQLQEKYPGKDMESRTALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDFM 150 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +L A DPT I L L + ++ P + Sbjct: 151 KTG--HFLWLNLGATDPTFILPLLAALFTFFSTWLSNKALP----------------ERN 192 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 G +++ MPVV F +G+ +YW+ SN +VQ ++ Sbjct: 193 GGMTVMMYLMPVVIFFFAFYAASGVALYWAVSNAYQVVQTLLL 235 >gi|22536592|ref|NP_687443.1| SpoIIIJ family protein [Streptococcus agalactiae 2603V/R] gi|76799479|ref|ZP_00781620.1| Membrane protein oxaA 1 precursor [Streptococcus agalactiae 18RS21] gi|77412336|ref|ZP_00788649.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111] gi|38502994|sp|Q8CX16|OXAA1_STRA5 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|22533428|gb|AAM99315.1|AE014210_5 SpoIIIJ family protein [Streptococcus agalactiae 2603V/R] gi|76585169|gb|EAO61786.1| Membrane protein oxaA 1 precursor [Streptococcus agalactiae 18RS21] gi|77161625|gb|EAO72623.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111] Length = 271 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 98/212 (46%), Gaps = 27/212 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 + + + G+ I+L T+ ++ + PL Q S+ M+ IQP++ EL++K+ P Sbjct: 46 QWLSFNHSIGLGIILFTLIIRAIMMPLYNMQMKSSQKMQEIQPRLKELQKKYPGKDPDNR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L M +YK +NP A P+L+Q+PV +A+++ ++ ++ F +L+ Sbjct: 106 LKLNDEMQSMYKAEGVNPYASVLPLLIQLPVLWALFQALTRVSFLKVGTFLSL--ELSQP 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ---AMILNWMPV 525 DP I P++ +L F+ ++ A + ++ MP Sbjct: 164 DPYYIL-------------------PVLAALFTFLSTWLTNKAAVEKNIALTLMTYVMPF 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + +F +G+++YW+ SN + Q ++ Sbjct: 205 IILVTSFNFASGVVLYWTVSNAFQVFQILLLN 236 >gi|257886890|ref|ZP_05666543.1| inner membrane protein [Enterococcus faecium 1,141,733] gi|293568628|ref|ZP_06679943.1| membrane protein OxaA 2 [Enterococcus faecium E1071] gi|293571649|ref|ZP_06682670.1| membrane protein OxaA 2 [Enterococcus faecium E980] gi|257822944|gb|EEV49876.1| inner membrane protein [Enterococcus faecium 1,141,733] gi|291588588|gb|EFF20421.1| membrane protein OxaA 2 [Enterococcus faecium E1071] gi|291608319|gb|EFF37620.1| membrane protein OxaA 2 [Enterococcus faecium E980] Length = 316 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 32/251 (12%) Query: 342 IAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPKI 396 + PM ++Y N ++G A++ TV V+++ PL Q + + M+ ++P++ Sbjct: 42 LVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQV 101 Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++K K + Q M Q+Y+ + ++ G C P+L+Q+P+F A+Y + Sbjct: 102 EAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYT 161 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +R + F+G DL + P+ + + + L G++ P Sbjct: 162 EGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGIP---------------E 202 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 K +L P + VF S PAG+ +YW V S +Q + M + L ++ Sbjct: 203 EQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQV 260 Query: 571 RSTFSKNYNSQ 581 +N Q Sbjct: 261 AEELKQNPPKQ 271 >gi|270290419|ref|ZP_06196644.1| preprotein translocase YidC subunit [Pediococcus acidilactici 7_4] gi|270281200|gb|EFA27033.1| preprotein translocase YidC subunit [Pediococcus acidilactici 7_4] Length = 322 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 34/255 (13%) Query: 336 WGWFYF-IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G+ Y +A PM M Y +LVG ++G+AI+L T V+L+ PL Q M Sbjct: 33 YGFIYDNLAVPMQHFMDYLSHLVGGSYGLAIILITFVVRLILLPLMVNQSRKATVQQEKM 92 Query: 390 KNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 IQP++ L+E+ + + + + M+ LY+ +NI+ G C P+L+Q PVF A+ Sbjct: 93 SYIQPQLKVLQERNQTAKTPEEKAAVSQEMMALYRDNNISMTGGIGCLPLLIQFPVFAAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ +F + + I ++ L ++ Sbjct: 153 YAAIQYSPELHQG-------------------IFLGIDLSKSSLLLSIISFLVYLLQGWL 193 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P K ++ P++ +F S PAGL +Y++ V + +Q +I Sbjct: 194 GTLGVPEEQRKTMRSMMVISPLMILFFTFSTPAGLGLYFAVGGVFACIQTLLIN---FYR 250 Query: 564 IGLIDRLRSTFSKNY 578 + ++ KN Sbjct: 251 PRIRAQIHEEMKKNP 265 >gi|294786223|ref|ZP_06751477.1| membrane protein OxaA [Parascardovia denticolens F0305] gi|315225756|ref|ZP_07867544.1| membrane protein OxaA [Parascardovia denticolens DSM 10105] gi|294485056|gb|EFG32690.1| membrane protein OxaA [Parascardovia denticolens F0305] gi|315119888|gb|EFT83020.1| membrane protein OxaA [Parascardovia denticolens DSM 10105] Length = 329 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 116/255 (45%), Gaps = 35/255 (13%) Query: 336 WGWFYFIAKP----MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL----------AKK 381 +GW Y I +P M ++ +F++++ N G+ +V + + K Sbjct: 8 FGWIYKILRPLEIAMTYIIKFFHDILTNIGLRGQQGIAWVISVMLLVVLVRLLILPLFIK 67 Query: 382 QYVSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 Q VS NM+ +QP++ +++ K+K + + + + +++Y+ +++NP C P L+Q Sbjct: 68 QMVSMRNMQAVQPQLQKIQNKYKGKTDPASREAMSRETMKIYQDNHVNPAGSCIPALIQS 127 Query: 438 PVFFAIYKVISISLEMR-------HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 PVF A++ +S+ + A + A A NI G + + Sbjct: 128 PVFMAMFYTLSMVTYISNGARGPLGAFDKAVSTEFAQARVFNITLSSMFTTANPGGKITI 187 Query: 491 GIWPIIMSLSMFIQM-----KMSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLII 540 GI+ +M +MF + P + +G Q M+ PV+++F+ +FP +++ Sbjct: 188 GIFVALMCFTMFYSQWHNTRRNMPRASMQGRSYRTQMMMSFIFPVMYIFSGIAFPFAVLV 247 Query: 541 YWSWSNVISIVQQAV 555 YW +N+ ++ Q Sbjct: 248 YWLTNNIWTLGQTFW 262 >gi|257884106|ref|ZP_05663759.1| inner membrane protein [Enterococcus faecium 1,231,501] gi|257819944|gb|EEV47092.1| inner membrane protein [Enterococcus faecium 1,231,501] Length = 316 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 32/251 (12%) Query: 342 IAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPKI 396 + PM ++Y N ++G A++ TV V+++ PL Q + + M+ ++P++ Sbjct: 42 LVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQV 101 Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++K K + Q M Q+Y+ + ++ G C P+L+Q+P+F A+Y + Sbjct: 102 EAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYT 161 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +R + F+G DL + P+ + + + L G++ P Sbjct: 162 EGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGIP---------------E 202 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 K +L P + VF S PAG+ +YW V S +Q + M + L ++ Sbjct: 203 EQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQV 260 Query: 571 RSTFSKNYNSQ 581 +N Q Sbjct: 261 AEELKQNPPKQ 271 >gi|330470829|ref|YP_004408572.1| 60 kDa inner membrane insertion protein [Verrucosispora maris AB-18-032] gi|328813800|gb|AEB47972.1| 60 kDa inner membrane insertion protein [Verrucosispora maris AB-18-032] Length = 325 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 113/261 (43%), Gaps = 40/261 (15%) Query: 339 FYFIAKPMFMLMSYFYN------------LVGNFGI--AIMLTTVFVKLLFFPLAKKQYV 384 +I + ++ +++ L N+ AI+ V V+++ FP+ KQ Sbjct: 4 LDWIYYAISWILLAWHSAWDAIGVPETAVLGTNWSWILAIIFLVVTVRVILFPIFVKQIK 63 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S M+ +QP++ L+EK K + LQK M++LY+ NPL GC P+ LQIPVF ++ Sbjct: 64 SQRAMQALQPQVKALQEKHKGD-RETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLF 122 Query: 445 KVISI----SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF------------- 487 V+ + + ++ +A +FT F Sbjct: 123 HVLRRLNPDPAKANKDIYGWTVEQFNSASDATLFTAPIASKFGSTAAELAQLGANGTTVK 182 Query: 488 MHVGIWPIIMSLSMFIQMKMS--------PPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 + GI ++M + ++ + P Q ++L +P+ + + + FP G+I Sbjct: 183 VMAGILVLVMMGTTYLTSRQMILKTGWAEDPQQRMIQRLMLYGIPLSLLISGAIFPIGVI 242 Query: 540 IYWSWSNVISIVQQAVIMKMH 560 IYW +N+ ++ QQ +++ Sbjct: 243 IYWVTNNLFTLGQQQWVLRKF 263 >gi|257893080|ref|ZP_05672733.1| inner membrane protein [Enterococcus faecium 1,231,408] gi|257829459|gb|EEV56066.1| inner membrane protein [Enterococcus faecium 1,231,408] Length = 316 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 32/251 (12%) Query: 342 IAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPKI 396 + PM ++Y N ++G A++ TV V+++ PL Q + + M+ ++P++ Sbjct: 42 LVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQV 101 Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++K K + Q M Q+Y+ + ++ G C P+L+Q+P+F A+Y + Sbjct: 102 EAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYT 161 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +R + F+G DL + P+ + + + L G++ P Sbjct: 162 EGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGIP---------------E 202 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 K +L P + VF S PAG+ +YW V S +Q + M + L ++ Sbjct: 203 EQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQV 260 Query: 571 RSTFSKNYNSQ 581 +N Q Sbjct: 261 AEELKQNPPKQ 271 >gi|324989805|gb|EGC21748.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK353] Length = 271 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 100/223 (44%), Gaps = 22/223 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G++ + + + + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I Sbjct: 32 GFWEQLVYFFADTIRFL-SFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHI 90 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ + L + +LYK +NP A P+ +Q+PV A+++ ++ M Sbjct: 91 KQLQEKYPGKDMESRTALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDFM 150 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +L A DPT I L L + ++ P + Sbjct: 151 KTG--HFLWLNLGATDPTFILPLLAALFTFFSTWLSNKALP----------------ERN 192 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 G +++ MPVV F +G+ +YW+ SN +VQ ++ Sbjct: 193 GGMTVMMYLMPVVIFFFALYAASGVALYWAVSNAYQVVQTLLL 235 >gi|19703356|ref|NP_602918.1| inner membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328798|ref|ZP_06871312.1| stage III sporulation protein J [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|38503076|sp|Q8RHA4|OXAA_FUSNN RecName: Full=Inner membrane protein oxaA gi|19713418|gb|AAL94217.1| Inner membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154133|gb|EFG94937.1| stage III sporulation protein J [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 205 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 60/222 (27%), Positives = 113/222 (50%), Gaps = 22/222 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + + + L++ VGNFGI+I++ T+ +K++ PL KQ S MK +QP+++ Sbjct: 4 IYNLLKQFLAFLLNTTDKYVGNFGISIIIVTILIKIILLPLTLKQDKSMKEMKKLQPELE 63 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ++++K+ Q+L ++LY+ H +NPL GC PIL+Q+P+ FA++ V+ + + Sbjct: 64 KIKQKYANDK-QMLNIKTMELYREHKVNPLGGCLPILVQLPILFALFGVLRSGIIPADSS 122 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F LA DP + P++ F+Q K+ + Sbjct: 123 FLWMR--LADPDPFYVL-------------------PVLNGAVSFLQQKLMGTSDNAQMK 161 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ P++ + P+GL +YW S++I+++QQ IMK Sbjct: 162 NMMYVFPIMMIVISYRMPSGLQLYWLTSSLIAVIQQYFIMKK 203 >gi|293553834|ref|ZP_06674449.1| membrane protein OxaA 2 [Enterococcus faecium E1039] gi|294620202|ref|ZP_06699536.1| membrane protein OxaA 2 [Enterococcus faecium E1679] gi|314940176|ref|ZP_07847354.1| putative OxaA-like protein [Enterococcus faecium TX0133a04] gi|314942407|ref|ZP_07849250.1| putative OxaA-like protein [Enterococcus faecium TX0133C] gi|314952317|ref|ZP_07855328.1| putative OxaA-like protein [Enterococcus faecium TX0133A] gi|314994240|ref|ZP_07859543.1| putative OxaA-like protein [Enterococcus faecium TX0133B] gi|314997155|ref|ZP_07862141.1| putative OxaA-like protein [Enterococcus faecium TX0133a01] gi|291593555|gb|EFF25095.1| membrane protein OxaA 2 [Enterococcus faecium E1679] gi|291602040|gb|EFF32277.1| membrane protein OxaA 2 [Enterococcus faecium E1039] gi|313588729|gb|EFR67574.1| putative OxaA-like protein [Enterococcus faecium TX0133a01] gi|313591327|gb|EFR70172.1| putative OxaA-like protein [Enterococcus faecium TX0133B] gi|313595576|gb|EFR74421.1| putative OxaA-like protein [Enterococcus faecium TX0133A] gi|313598807|gb|EFR77652.1| putative OxaA-like protein [Enterococcus faecium TX0133C] gi|313640615|gb|EFS05195.1| putative OxaA-like protein [Enterococcus faecium TX0133a04] Length = 316 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 32/251 (12%) Query: 342 IAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPKI 396 + PM ++Y N ++G A++ TV V+++ PL Q + + M+ ++P++ Sbjct: 42 LVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQV 101 Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++K K + Q M Q+Y+ + ++ G C P+L+Q+P+F A+Y + Sbjct: 102 EAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYT 161 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +R + F+G DL + P+ + + + L G++ P Sbjct: 162 EGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGIP---------------E 202 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 K +L P + VF S PAG+ +YW V S +Q + M + L ++ Sbjct: 203 EQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQV 260 Query: 571 RSTFSKNYNSQ 581 +N Q Sbjct: 261 AEELKQNPPKQ 271 >gi|314935960|ref|ZP_07843310.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80] gi|313655966|gb|EFS19708.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80] Length = 289 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 121/263 (46%), Gaps = 36/263 (13%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVST----ANM 389 G+FY +PM ++ + +++ + +GIAI++ + ++++ P Y ++ M Sbjct: 30 GFFYNTFVEPMAKILHWLGHSVFHDDYGIAIIVLVLVIRIILLPFMLSNYKNSHMMREKM 89 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P+++ ++EK K++ Q + M+++YK ++INP+ GC P+L+Q+P+ Sbjct: 90 KIAKPEVEGVQEKVKRARTQEEKMAANQEMMEVYKKYDINPMKSALGCLPVLIQMPIVMG 149 Query: 443 IYKVISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ + + P + W +L D I + G+L F + Sbjct: 150 LYFVLRYRIGGGITEHPHFLWF-NLVHPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ K P + M++ P++ ++ S + L +YWS S I+Q K + Sbjct: 192 AWVSSKQMPEEQRQMTYMMMIVSPIMIIWISLSSASALGLYWSVSAAFLIIQTFFANKHY 251 Query: 561 G--AEIGLIDRLRSTFSKNYNSQ 581 A+ + + + N N + Sbjct: 252 EKVAKQEIGPMVEAHKENNSNKK 274 >gi|56965671|ref|YP_177405.1| stage III sporulation protein J [Bacillus clausii KSM-K16] gi|56911917|dbj|BAD66444.1| stage III sporulation protein J [Bacillus clausii KSM-K16] Length = 265 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 117/250 (46%), Gaps = 35/250 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W F PM L+++F +L G FG I++ T+ ++LL PLA K ST M+ ++P++ Sbjct: 36 WNSFFVYPMSFLITFFSDLTGGHFGWGIIIVTILIRLLILPLALKSQKSTRAMQVLRPEM 95 Query: 397 DELREKFKQS-----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 E++EK K++ + +Q M+ LY+ H +NP AGC P L+QIP+ A+Y I + Sbjct: 96 QEIQEKMKKAQGNPEKQREVQAEMLSLYQKHGVNPAAGCLPALVQIPIVMALYFAIMRTE 155 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+ P + F P ++ P+I ++ F+Q KMS Sbjct: 156 EIGVGP----------------ASAFLWFNLGSPDYI----LPVIAGITTFVQFKMSMSQ 195 Query: 512 ADKG---------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++L MPV+ V A + P+ L +YW N+ IVQ I+ Sbjct: 196 MPANPLGEGMPNPMNIMLYIMPVMIVIAGITLPSALALYWVVGNLFMIVQTYFIIVRPNM 255 Query: 563 EIGLIDRLRS 572 + + ++ Sbjct: 256 TKEEVQKDKA 265 >gi|288574742|ref|ZP_06393099.1| 60 kDa inner membrane insertion protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570483|gb|EFC92040.1| 60 kDa inner membrane insertion protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 259 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 69/240 (28%), Positives = 120/240 (50%), Gaps = 21/240 (8%) Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 + M+ L+S +N VG++G+A+++ T+ V+LL PL KQ VS M+ +QP+I L+EK Sbjct: 6 SNAMYGLLSTIHNFVGSWGLAVIVLTLLVRLLLHPLNHKQLVSMQKMQKLQPRIKMLQEK 65 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----------SL 451 +K + L + + LYK + +NP AGC P+L+Q+P+ +++V+ +L Sbjct: 66 YKDDK-EGLSRETMALYKENKVNPAAGCLPLLVQLPILILLFRVLMNSDFGGASFLGITL 124 Query: 452 EMRHAPFWGWIKDLAAADPTNI--FTLFGILPFYLPGFMHVGIW------PIIMSLSMFI 503 E + AA+ TNI T+ + G G++ ++ + Sbjct: 125 EGSVLTTMAEALGVVAAEGTNIGFMTVVKAIMANPSGLASFGLYGPNLLLLGLIIFVTWY 184 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q +MS + AM+ +MPV F S P G+++YW S+ I + QQ ++ E Sbjct: 185 QQRMSST-GNPQMAMMNWFMPVFMGFICLSLPGGVMLYWGASSFIGVGQQWWVLHKTSQE 243 >gi|225869297|ref|YP_002745245.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. zooepidemicus] gi|225702573|emb|CAX00574.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. zooepidemicus] Length = 275 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 32/225 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF AK + L + G+ GI I+L T+ ++LL PL Q S M++IQP++ Sbjct: 43 VYFFAKAIQWL-----SFDGSTGIGIILFTIMIRLLLLPLFNMQIKSGQKMQDIQPELKA 97 Query: 399 LREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 L++K+ L + LYK + +NP P+L+Q+PV FA+++ ++ +R Sbjct: 98 LQKKYAAKDTATRMKLAEESQALYKKYGVNPYMSLLPLLIQMPVMFALFQSLTRVAFLRE 157 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 F L L H+ I PI+ ++ F+ ++ A + Sbjct: 158 GTF---------------------LWVELARHDHLFILPILAAVFTFLSTWLTNLAAREK 196 Query: 516 QAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 AM + MP+ F + +G+++YW+ SN +VQ + Sbjct: 197 TAMITIMTYVMPIFIFFMGFNLASGVVLYWAVSNAFQVVQLLLFN 241 >gi|253681205|ref|ZP_04862003.1| OxaA [Clostridium botulinum D str. 1873] gi|253562443|gb|EES91894.1| OxaA [Clostridium botulinum D str. 1873] Length = 247 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 20/236 (8%) Query: 342 IAKPMFMLMSYFYNLVGN----FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 K ++ S+ + L N +G+ I++ T+ ++++ FPL KQ S M IQP+I Sbjct: 22 FVKFFQVIHSWVHTLFTNPNISYGLTIIVLTLIIRIVLFPLNYKQIKSQVAMTEIQPEIK 81 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+EK+K P Q Q+ M++LYK + +NPL GC P+LLQ P+ A++ V + ++ + Sbjct: 82 KLQEKYKNDP-QRQQQEMMKLYKEYGVNPLGGCLPLLLQWPILIALFYVFNNLSKIEPSI 140 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM-----KMSPPPA 512 + +P P + + I PI+ +L + K S Sbjct: 141 VNVTFLGVKLMEPA----------ILKPEYWYTWILPIVSALLTYFSTVIMTSKNSDSAQ 190 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 K M+ +M + V+ FP L++YW +++ I Q + + + L+ Sbjct: 191 VKQTKMMSGFMTLFVVYMSFKFPTALVLYWITNSLFQIGQTVITQRSQQKKKELVQ 246 >gi|227551947|ref|ZP_03981996.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecium TX1330] gi|257895460|ref|ZP_05675113.1| inner membrane protein [Enterococcus faecium Com12] gi|293378327|ref|ZP_06624496.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecium PC4.1] gi|227178852|gb|EEI59824.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecium TX1330] gi|257832025|gb|EEV58446.1| inner membrane protein [Enterococcus faecium Com12] gi|292643191|gb|EFF61332.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecium PC4.1] Length = 316 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 32/251 (12%) Query: 342 IAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPKI 396 + PM ++Y N ++G A++ TV V+++ PL Q + + M+ ++P++ Sbjct: 42 LVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQV 101 Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++K K + Q M Q+Y+ + ++ G C P+L+Q+P+F A+Y + Sbjct: 102 EAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYT 161 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +R + F+G DL + P+ + + + L G++ P Sbjct: 162 EGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGIP---------------E 202 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 K +L P + VF S PAG+ +YW V S +Q + M + L ++ Sbjct: 203 EQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQV 260 Query: 571 RSTFSKNYNSQ 581 +N Q Sbjct: 261 AEELKQNPPKQ 271 >gi|225869761|ref|YP_002745708.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. equi 4047] gi|225699165|emb|CAW92392.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. equi 4047] Length = 275 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 32/225 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF AK + L + G+ GI I+L T+ ++LL PL Q S M++IQP++ Sbjct: 43 VYFFAKAIQWL-----SFDGSTGIGIILFTIMIRLLLLPLFNMQIKSGQKMQDIQPELKA 97 Query: 399 LREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 L++K+ L + LYK + +NP P+L+Q+PV FA+++ ++ +R Sbjct: 98 LQKKYAAKDTATRMKLAEESQALYKKYGVNPYMSLLPLLIQMPVMFALFQSLTRVAFLRE 157 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 F L L H+ I PI+ ++ F+ ++ A + Sbjct: 158 GTF---------------------LWVELARHDHLFILPILAAVFTFLSTWLTNLAAREK 196 Query: 516 QAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 AM + MPV F + +G+++YW+ SN +VQ + Sbjct: 197 TAMITIMTYVMPVFIFFMGFNLASGVVLYWAVSNAFQVVQLLLFN 241 >gi|308174180|ref|YP_003920885.1| Sec-independent factor for membrane protein insertion [Bacillus amyloliquefaciens DSM 7] gi|307607044|emb|CBI43415.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus amyloliquefaciens DSM 7] gi|328554124|gb|AEB24616.1| OxaA-like protein precursor [Bacillus amyloliquefaciens TA208] gi|328912515|gb|AEB64111.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus amyloliquefaciens LL3] Length = 278 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 22/238 (9%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMK 390 G+F+ ++ +P L+ L G +G++I+L T+ V+++ PL Q+ M Sbjct: 40 GFFHDYLIEPFSALLKGVAGLFHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRVFQEKMA 99 Query: 391 NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYK 445 I+P++D ++ K K+ + LQ M++LY+ HN+NP+A GC P+L+Q P+ Y Sbjct: 100 VIKPQVDSIQAKMKKTKDAEKQKELQMEMMKLYREHNLNPMAMGCLPMLVQFPILIGFYY 159 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I + E+ A L +D +L G M+ + L+ Sbjct: 160 AIRSTPEI--ASHSFLWFSLGHSD---------MLVSLCAGAMYFLQAYVSQKLNEKYSP 208 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P A + +++ PV+ + PA L +YW S + VQ ++ + H + Sbjct: 209 AAQNPAAMQSAKIMVFIFPVMMTVFSLNVPAALPLYWFTSGLFLTVQNVLLQQTHHKK 266 >gi|159040588|ref|YP_001539841.1| 60 kDa inner membrane insertion protein [Salinispora arenicola CNS-205] gi|157919423|gb|ABW00851.1| 60 kDa inner membrane insertion protein [Salinispora arenicola CNS-205] Length = 338 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 44/271 (16%) Query: 339 FYFIAKPMFMLMSYFYN------------LVGNFGI--AIMLTTVFVKLLFFPLAKKQYV 384 +I + ++ ++ L N+ AI+ V V+++ FP+ KQ Sbjct: 3 LDWIYYAISWILLLWHQAWDAIGVPDGAVLGTNWAWILAIIFLVVTVRVILFPVFVKQIK 62 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S M+ +QP++ L+EK K + LQK M++LY+ NPL GC P+ LQIPVF ++ Sbjct: 63 SQRAMQALQPQVKALQEKHKGD-RETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLF 121 Query: 445 KVISI---SLEMRHAPFWGWIKDLAAADPTNIFTLFGIL----------------PFYLP 485 V+ + +GW D D ++ LF Sbjct: 122 HVLRRLNPDKPLDKKTLYGWTVD--QFDSASVAKLFTAPIAGKFGSSAEELARLGADGTT 179 Query: 486 GFMHVGIWPIIMSLSMFIQMKMS--------PPPADKGQAMILNWMPVVFVFALSSFPAG 537 + GI ++M + ++ + P Q ++L +P + + + FP G Sbjct: 180 VKIMAGILVLVMMGTTYLTSRQMILKTGWAEDPQQRMIQRLMLYGIPASLLISGAIFPIG 239 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 +IIYW +N+ ++ QQ +++ + Sbjct: 240 VIIYWVTNNMFTLAQQQWVLRKFPPPPNVTK 270 >gi|290891476|ref|ZP_06554535.1| hypothetical protein AWRIB429_1925 [Oenococcus oeni AWRIB429] gi|290478918|gb|EFD87583.1| hypothetical protein AWRIB429_1925 [Oenococcus oeni AWRIB429] Length = 286 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 104/261 (39%), Gaps = 30/261 (11%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVS 385 +P + G+ I + L GN +G I++ T+ ++ L PL S Sbjct: 33 VPNNASTVYKGFLGSITGFFANSILGVSKLCGNSYGFGIVIFTLLIRFLILPLMVYSISS 92 Query: 386 TANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 + NM + P + +++ K+K + LQ+ +YK +NP A P+L+Q+PV + Sbjct: 93 SKNMAKVAPLVKKVQAKYKGKRDRDSMTKLQEETSSIYKEAGVNPYASLLPVLIQLPVLW 152 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A+++ +S + ++ F+ L + DP + PI+ +L Sbjct: 153 ALFQSVSSTPALKTGSFFWL--QLGSPDPYFVL-------------------PILAALFT 191 Query: 502 FIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FI MS K Q + P + +F+ + + L +YW +N +VQ + Sbjct: 192 FISSWMSTASMGKDQPGFAKAMPYIFPFIILFSALAVSSALSLYWVATNAFQVVQTFFLQ 251 Query: 558 KMHGAEIGLIDRLRSTFSKNY 578 A + + + Sbjct: 252 NPFKARAEEKAKELAELERKK 272 >gi|257898075|ref|ZP_05677728.1| inner membrane protein [Enterococcus faecium Com15] gi|257835987|gb|EEV61061.1| inner membrane protein [Enterococcus faecium Com15] Length = 316 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 32/251 (12%) Query: 342 IAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPKI 396 + PM ++Y N ++G A++ TV V+++ PL Q + + M+ ++P++ Sbjct: 42 LVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQV 101 Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++K K + Q M Q+Y+ + ++ G C P+L+Q+P+F A+Y + Sbjct: 102 EAAQQKLKAATTREEQMSAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYT 161 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +R + F+G DL + P+ + + + L G++ P Sbjct: 162 EGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGIP---------------E 202 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 K +L P + VF S PAG+ +YW V S +Q + M + L ++ Sbjct: 203 EQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQV 260 Query: 571 RSTFSKNYNSQ 581 +N Q Sbjct: 261 AEELKQNPPKQ 271 >gi|262281818|ref|ZP_06059587.1| membrane protein oxaA 1 [Streptococcus sp. 2_1_36FAA] gi|262262272|gb|EEY80969.1| membrane protein oxaA 1 [Streptococcus sp. 2_1_36FAA] Length = 271 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 24/234 (10%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ--- 409 F + + GI I+L T+ ++ + P+ + Q S+ M+ QP I L+ K+ + Sbjct: 47 FLSFNSSLGIGIILFTIVIRTVLLPVFQIQMNSSRKMQEAQPHIKALQAKYPGKDMESRN 106 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 +L +LYK +NPLA P+ +Q+PV A+++ ++ +E + W+ +LA D Sbjct: 107 LLATETQKLYKELGVNPLASFIPLFIQMPVLLALFQALTR-VEFMKTGHFLWL-NLAEKD 164 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I + L +L +++ + ++ MP++ + Sbjct: 165 PYFILPVLAALFTFLSSWLNNKGLA----------------EKNGAMTVMTYLMPLLIFW 208 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI---MKMHGAEIGLIDRLRSTFSKNYNS 580 SF +G+ +YW+ SN + Q V+ KM ++ R K + Sbjct: 209 FALSFSSGVALYWTVSNAYQVGQTLVLSNPFKMIAEREAKLNAAREQEEKKKRA 262 >gi|52786308|ref|YP_092137.1| OxaA-like protein precursor [Bacillus licheniformis ATCC 14580] gi|319645111|ref|ZP_07999344.1| YqjG protein [Bacillus sp. BT1B_CT2] gi|52348810|gb|AAU41444.1| YqjG [Bacillus licheniformis ATCC 14580] gi|317392920|gb|EFV73714.1| YqjG protein [Bacillus sp. BT1B_CT2] Length = 274 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 23/233 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----I 392 + +++ P L+ + GN+G++I+ T+ V++L FPL QY M+ + Sbjct: 40 FHHYVVVPFSELIKGIAGIFHGNYGLSIIFVTIIVRVLVFPLFANQYKKQRAMQEKMALV 99 Query: 393 QPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVI 447 +P++D ++ + K++ + +Q+ M+QLY+ HNINPLA GC P+L+Q P+ Y I Sbjct: 100 KPELDAIQSRLKKTKDPVKQREIQQEMMQLYQKHNINPLAMGCLPMLIQFPILIGFYYAI 159 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + E+ A +L +D I+ GFM+ + + L Q Sbjct: 160 RSTPEI--ASHSFLWFNLGHSD---------IIVSLSAGFMYFIQFYVSQKL--NAQNAQ 206 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 S P A + ++ + PV+ + PA L +YW S ++ +Q V+ +++ Sbjct: 207 SNPAAQQSAKIMGFFFPVMMTIFSINVPAALPLYWLTSGLLLTIQSVVLHQVY 259 >gi|322391229|ref|ZP_08064701.1| stage III sporulation protein J [Streptococcus peroris ATCC 700780] gi|321145982|gb|EFX41371.1| stage III sporulation protein J [Streptococcus peroris ATCC 700780] Length = 271 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 50/222 (22%), Positives = 100/222 (45%), Gaps = 21/222 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I E Sbjct: 33 FWSKLVYFFAVTIRFLSFDISIGLGIILFTVLIRTILLPVFQTQMVASRKMQEAQPRIKE 92 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L + +L+K I A WP+L+Q+P+ A+++ +S ++ Sbjct: 93 LRERYPGRDMESRTKLDQETRKLFKELGIKQSATFWPLLIQMPILLALFQALSNVDFLKT 152 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 F + +L AD T + + L + ++ P + Sbjct: 153 GHFLWF--NLGGADTTFVLPILAALFTFFSSWLSNKALP----------------EKNAA 194 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ MPV+ F S P+G+ +YW+ SN ++Q ++ Sbjct: 195 MTGMMYGMPVIIFFFAISAPSGVALYWAVSNAYQVLQTYLLN 236 >gi|52080933|ref|YP_079724.1| OxaA-like protein [Bacillus licheniformis ATCC 14580] gi|52004144|gb|AAU24086.1| translocase for membrane proteins OxaA2 [Bacillus licheniformis ATCC 14580] Length = 273 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 23/233 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----I 392 + +++ P L+ + GN+G++I+ T+ V++L FPL QY M+ + Sbjct: 39 FHHYVVVPFSELIKGIAGIFHGNYGLSIIFVTIIVRVLVFPLFANQYKKQRAMQEKMALV 98 Query: 393 QPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVI 447 +P++D ++ + K++ + +Q+ M+QLY+ HNINPLA GC P+L+Q P+ Y I Sbjct: 99 KPELDAIQSRLKKTKDPVKQREIQQEMMQLYQKHNINPLAMGCLPMLIQFPILIGFYYAI 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + E+ A +L +D I+ GFM+ + + L Q Sbjct: 159 RSTPEI--ASHSFLWFNLGHSD---------IIVSLSAGFMYFIQFYVSQKL--NAQNAQ 205 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 S P A + ++ + PV+ + PA L +YW S ++ +Q V+ +++ Sbjct: 206 SNPAAQQSAKIMGFFFPVMMTIFSINVPAALPLYWLTSGLLLTIQSVVLHQVY 258 >gi|304384699|ref|ZP_07367045.1| membrane protein [Pediococcus acidilactici DSM 20284] gi|304328893|gb|EFL96113.1| membrane protein [Pediococcus acidilactici DSM 20284] Length = 322 Score = 157 bits (397), Expect = 4e-36, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 34/255 (13%) Query: 336 WGWFYF-IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G+ Y +A PM M Y +LVG ++G+AI+L T V+L+ PL Q M Sbjct: 33 YGFIYDNLAVPMQHFMDYLSHLVGGSYGLAIILITFVVRLILLPLMVNQSRKATVQQEKM 92 Query: 390 KNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 IQP++ L+E+ + + + + M+ LY+ +NI+ G C P+L+Q PVF A+ Sbjct: 93 SYIQPQLKVLQERNQTAKTPEEKAAVSQEMMALYRDNNISMTGGIGCLPLLIQFPVFAAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ +F + + I ++ L ++ Sbjct: 153 YAAIQYSPELHQG-------------------IFLGIDLSKSSLLLSIISFLVYLLQGWL 193 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P K ++ P++ +F S PAGL +Y++ V + +Q +I Sbjct: 194 GTLGVPEEQRKTMRSMMVISPLMILFFTFSTPAGLGLYFAVGGVFACIQTLLIN---FYR 250 Query: 564 IGLIDRLRSTFSKNY 578 + ++ KN Sbjct: 251 PRIRAQIHEEMKKNP 265 >gi|254302384|ref|ZP_04969742.1| inner membrane protein YidC [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322576|gb|EDK87826.1| inner membrane protein YidC [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 205 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 22/222 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + + + L++ VGNFGI+I++ T+ +K+L PL KQ S MK +QP+++ Sbjct: 4 IYNLLKQFLAFLLNTTDKYVGNFGISIIIVTILIKILLLPLTLKQDKSMKEMKKLQPELE 63 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ++++K+ Q+L ++LY+ H +NPL GC PIL+Q+P+ FA++ V+ + + Sbjct: 64 KIKQKYANDK-QMLNIKTMELYREHKVNPLGGCLPILVQLPILFALFGVLRSGIIPTDSS 122 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F L+ DP I P++ F+Q K+ + Sbjct: 123 FLWM--KLSEPDPFFIL-------------------PVLNGAVSFLQQKLMGTSDNAQMK 161 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ P++ + P+GL +YW S++I+++QQ IMK Sbjct: 162 NMMYVFPIMMIVISYKMPSGLQLYWLTSSLIAVIQQYFIMKK 203 >gi|311068990|ref|YP_003973913.1| OxaA-like protein precursor [Bacillus atrophaeus 1942] gi|310869507|gb|ADP32982.1| OxaA-like protein precursor [Bacillus atrophaeus 1942] Length = 277 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 22/246 (8%) Query: 326 AIPRFEMLIDWGWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQY 383 A P+ L + G+F+ ++ +P L+ L G +G++IML T+ V+++ PL Q+ Sbjct: 27 ATPQTGGLGNIGFFHDYLIEPFSALLKGVAGLFNGEYGLSIMLVTIIVRVIVLPLFVHQF 86 Query: 384 VSTA----NMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLA-GCWPIL 434 M I+P+ID ++ K K++ + LQ M++LY+ +N+NPLA GC P+L Sbjct: 87 KKQRVFQEKMAVIKPQIDSIQAKIKKNKDPEKQKELQMEMMKLYQENNLNPLAMGCLPML 146 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q P+ Y I + E+ A L +D IL G M+ Sbjct: 147 VQFPILIGFYYAIRSTPEI--ASHSFLWFSLGQSD---------ILVSLCAGAMYFIQAY 195 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 + LS P A + +++ + PV+ + PA L +YW S + VQ Sbjct: 196 VAQKLSAKYSAVPQNPAAQQSAKIMVFFFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNV 255 Query: 555 VIMKMH 560 ++ + + Sbjct: 256 ILQQTY 261 >gi|260654889|ref|ZP_05860377.1| membrane protein insertase, YidC/Oxa1 family [Jonquetella anthropi E3_33 E1] gi|260630391|gb|EEX48585.1| membrane protein insertase, YidC/Oxa1 family [Jonquetella anthropi E3_33 E1] Length = 261 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 64/254 (25%), Positives = 125/254 (49%), Gaps = 24/254 (9%) Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 +K ++ +S Y++VG++G AI++ T+ ++ + PL KKQ VS M+ +QP+I L+EK Sbjct: 9 SKALYDFLSLIYSVVGSWGWAILILTLIIRAVLHPLNKKQMVSMQKMQKLQPRIKVLQEK 68 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + + L + + LY+ + +NP +GC P+L+Q+P+ +++V+ S A F+G Sbjct: 69 YAND-RETLGRETMALYRENKVNPASGCLPLLIQLPILILLFQVLRTS-SFGGASFFGIS 126 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGI--------------------WPIIMSLSMF 502 + + T F GF + I++ + Sbjct: 127 LEGSVYTQLAQATGFAFNNPSELGFFALMSHVFKNPSGLSNVLIWLPNLALVILICYLTW 186 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA-VIMKMHG 561 +Q KMS ++ +L +MP++ F S P G+ +YW+ S++++ +QQ V+ K+ Sbjct: 187 LQQKMS-SAGNQQMGAMLVFMPILMAFICLSLPGGVALYWAASSLLAAIQQIQVVRKVEN 245 Query: 562 AEIGLIDRLRSTFS 575 E ++ + R Sbjct: 246 EEKPVLLKDRPKKE 259 >gi|118587491|ref|ZP_01544916.1| conserved hypothetical protein [Oenococcus oeni ATCC BAA-1163] gi|118432141|gb|EAV38882.1| conserved hypothetical protein [Oenococcus oeni ATCC BAA-1163] Length = 286 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 105/261 (40%), Gaps = 30/261 (11%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVS 385 +P + G+ I + L GN +G I++ T+ ++ L PL S Sbjct: 33 VPNNASTVYKGFLGSITGFFANSILGVSKLCGNSYGFGIVIFTLLIRFLILPLMVYSISS 92 Query: 386 TANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 + NM + P + +++ K+K + LQ+ +YK +NP A P+L+Q+PV + Sbjct: 93 SKNMAKVAPLVKKVQAKYKGKRDRDSMTKLQEETSSIYKEAGVNPYASLLPVLIQLPVLW 152 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A+++ +S + ++ F+ + L + DP + PI+ +L Sbjct: 153 ALFQSVSSTPALKTGSFFWF--QLGSPDPYFVL-------------------PILAALFT 191 Query: 502 FIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FI MS K Q + P + +F+ + + L +YW +N +VQ + Sbjct: 192 FISSWMSTASMGKDQPGFAKAMPYIFPFIILFSALAVSSALSLYWVATNAFQVVQTFFLQ 251 Query: 558 KMHGAEIGLIDRLRSTFSKNY 578 A + + + Sbjct: 252 NPFKARAEEKAKELAELERKK 272 >gi|257883078|ref|ZP_05662731.1| inner membrane protein [Enterococcus faecium 1,231,502] gi|257818736|gb|EEV46064.1| inner membrane protein [Enterococcus faecium 1,231,502] Length = 316 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 108/251 (43%), Gaps = 32/251 (12%) Query: 342 IAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPKI 396 + PM ++Y N ++G A++ TV V+++ PL Q + + M+ ++P++ Sbjct: 42 LVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQV 101 Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++K K + Q M Q+Y+ + ++ G C P+L+Q+P+F A+Y + Sbjct: 102 EAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYT 161 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +R + F+G DL + P+ + + + L G++ P Sbjct: 162 EGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGIP---------------E 202 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 K +L P + VF S PAG+ +YW V S +Q + + + L ++ Sbjct: 203 EQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVIM--KPRLKAQV 260 Query: 571 RSTFSKNYNSQ 581 +N Q Sbjct: 261 AEELKQNPPKQ 271 >gi|296333458|ref|ZP_06875911.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675036|ref|YP_003866708.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. spizizenii str. W23] gi|296149656|gb|EFG90552.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413280|gb|ADM38399.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. spizizenii str. W23] Length = 275 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 22/235 (9%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMK 390 G+F+ ++ +P L+ L G +G++I+L T+ V+++ PL Q+ M Sbjct: 38 GFFHDYLIEPFSALLKGVAGLFHGEYGLSIILVTIIVRVVVLPLFVNQFKKQRIFQEKMA 97 Query: 391 NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYK 445 I+P++D ++ K K+ + LQ M++LY+ HNINPLA GC P+L+Q P+ Y Sbjct: 98 VIKPQVDSIQAKLKKTKDPEKQKELQMEMMKLYQEHNINPLAMGCLPMLIQFPIVIGFYY 157 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I + E+ A L +D IL G M+ + LS Sbjct: 158 AIRSTPEI--ASHSFLWFSLGQSD---------ILVSLSAGAMYFIQAYVAQKLSAKYSA 206 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P A + +++ PV+ + PA L +YW S + VQ V+ H Sbjct: 207 VPQNPAAQQSAKLMVFIFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNIVLQMTH 261 >gi|195977384|ref|YP_002122628.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974089|gb|ACG61615.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 269 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 32/225 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF AK + L + G+ GI I+L T+ ++LL PL Q S M++IQP++ Sbjct: 37 VYFFAKAIQWL-----SFDGSTGIGIILFTIMIRLLLLPLFNMQIKSGQKMQDIQPELKA 91 Query: 399 LREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 L++K+ L + LYK + +NP P+L+Q+PV FA+++ +S +R Sbjct: 92 LQKKYAAKDTATRMKLAEESQALYKKYGVNPYMSLLPLLIQMPVMFALFQSLSRVAFLRE 151 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 F L L H+ I PI+ ++ F+ ++ A + Sbjct: 152 GTF---------------------LWVELARHDHLFILPILAAVFTFLSTWLTNLAAREK 190 Query: 516 QAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 AM + MP+ F + +G+++YW+ SN +VQ + Sbjct: 191 TAMITIMTYVMPIFIFFMGFNLASGVVLYWAVSNAFQVVQLLLFN 235 >gi|188587521|ref|YP_001919066.1| 60 kDa inner membrane insertion protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352208|gb|ACB86478.1| 60 kDa inner membrane insertion protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 213 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 66/227 (29%), Positives = 120/227 (52%), Gaps = 26/227 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 I + ++S+FY L G++G+AI++ T+ V+ L FPL KQ ST M+ +QP++ + Sbjct: 2 LDPIISVLGSILSFFYELTGSYGLAIVILTIGVRALTFPLMAKQMQSTNKMQELQPELKK 61 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH--A 456 L+EK+K + L K ++L+K H +NP AGC P+++Q+PV A+++++ + Sbjct: 62 LQEKYKDDK-ETLNKKTMELWKKHKVNPAAGCLPLIVQMPVLIAMFRLLRDYQQFLGDVD 120 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P + I DL+ +DP I PI+ + F+Q K++ Sbjct: 121 PVFLGI-DLSQSDPFFIL-------------------PILAGGTTFLQQKLTMTSQSNSS 160 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M++ + +F S+ PAGL +Y+ N+ S++ ++MK + E Sbjct: 161 MMMIMPFMI--IFISSTLPAGLPLYFVVGNIFSLI-AHLVMKKNKPE 204 >gi|116619134|ref|YP_819505.1| preprotein translocase subunit YidC [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097981|gb|ABJ63132.1| Preprotein translocase subunit YidC [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 278 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 21/223 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +A ++ N+G+ I+L T+F++ L PL Q S M+ +QP + Sbjct: 43 WSAIVAVFTRAILGASSWFGNNYGMGIILFTIFIRFLILPLMVYQVQSMMKMQVVQPALK 102 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 EL+ K+ Q++ LYK +NP A P+++Q+P+ A+Y+ I S +R Sbjct: 103 ELQAKYPGKDTESRQLMMAEQQALYKDAGVNPFASMLPLIVQMPILIALYQSIWNSPVLR 162 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F L + DP I + L + ++ S P + Sbjct: 163 SGKFLWL--QLGSNDPYFILPVLAALFTFASSWL----------------SMQSNPDQNG 204 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + PV+ F+ + P+ L +YW N VQ + Sbjct: 205 MTKAMPYIFPVIIFFSALAVPSALSLYWVVGNAFQTVQTFFLQ 247 >gi|229822696|ref|YP_002884222.1| 60 kDa inner membrane insertion protein [Beutenbergia cavernae DSM 12333] gi|229568609|gb|ACQ82460.1| 60 kDa inner membrane insertion protein [Beutenbergia cavernae DSM 12333] Length = 382 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 29/230 (12%) Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 +Q ++ ++ +QP+I +L++K+K + Q +Q+ M+ +Y+ NP A C PIL Sbjct: 58 FVRQIRASRGLQIVQPEIQKLQKKYKGKTDPASRQAMQQEMMAIYREAGTNPFASCLPIL 117 Query: 435 LQIPVFFAIYKVISISLEMRHA----PFWGWIKD--LAAADPTNIFTLFGILPFY----L 484 Q PVFFA+++V++ + P G + A A+ + F F + Sbjct: 118 AQSPVFFALFRVLASLPALASGDYGRPSIGPLTQEIAAEAEQSTFFGAQLSQTFMSSDDV 177 Query: 485 PGFMHVGIWPIIMSLSMF-----IQMKMSPP-----PADKGQAMILNWMPVVFVFALSSF 534 + + ++MS + F + MK P P + Q M++ +P++F F +F Sbjct: 178 QVKIVTVVLIVLMSATTFFTQRQLTMKNMPQTALDNPMARQQRMLMYVLPLIFAFTGVNF 237 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKM-----HGAEIGLIDRLRSTFSKNYN 579 P G+++YWS SN+ ++ QQ +++ AE L +R K Sbjct: 238 PIGVLVYWSTSNLWTMGQQFYVIRRSPAPGSEAEAKLKERQARKRLKRGE 287 >gi|308068957|ref|YP_003870562.1| membrane protein oxaA 2 precursor [Paenibacillus polymyxa E681] gi|305858236|gb|ADM70024.1| Membrane protein oxaA 2 precursor [Paenibacillus polymyxa E681] Length = 277 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 30/240 (12%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMK 390 G+F +++ P+ L+ G +FG+AIM T V+L PL +Q + M Sbjct: 45 GFFNHYVVFPLSWLIQQLAQWFGGSFGLAIMTLTFIVRLALLPLMMRQTRAQQGMKRKMS 104 Query: 391 NIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYK 445 +QP +D +++K++ Q +Q+ M+ LYK H NPL GC PIL+Q+P+ +Y Sbjct: 105 VMQPDLDRIKKKYENKKDTTSQQSMQQEMMSLYKEHQFNPLNIGCLPILIQLPILSGMYT 164 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I ++ E+ F P ++ + ++ + Sbjct: 165 AIRLTPELASHS-------------------FLWFRLGQPDWILAIVVAVVYLAQAKLSQ 205 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P K A++ P++ + PA + +YW+ S ++Q + + E Sbjct: 206 LQMTPDQRKQFAIMGYLSPIMMAVFSFNAPAAMPLYWTVSGTFLLLQSLWFRRRYPIEEA 265 >gi|261368848|ref|ZP_05981731.1| stage III sporulation protein J [Subdoligranulum variabile DSM 15176] gi|282569122|gb|EFB74657.1| stage III sporulation protein J [Subdoligranulum variabile DSM 15176] Length = 339 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 73/271 (26%), Positives = 122/271 (45%), Gaps = 46/271 (16%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 YF+A + L+ YNL+GN+ +++ T+ +KLL FPLA Q STA M QP ++ Sbjct: 3 ILYFLAILIGPLVKVLYNLIGNYAATMIVATLILKLLLFPLAIHQQKSTAKMSVFQPLMN 62 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM---- 453 E+++K+K +P + Q+ M++L + H NP+AGC P+LL + V F V+ + Sbjct: 63 EIQQKYKNNP-EKQQEEMMKLQQEHGFNPMAGCLPMLLTMLVLFGFLGVVYYPVHYIFGV 121 Query: 454 ---------------------RHAPFWGWIKDLAAADPTNI------------FTLFGIL 480 I + A DP+ I FG+ Sbjct: 122 SDAAVRQACETLGLATANATTMQTSLIQAIHNGAVIDPSIISADVVNEIKNFNTVFFGMD 181 Query: 481 PFYLPGF--MHVGIWPIIMSLSMFIQ----MKMS--PPPADKGQAMILNWMPVVFVFALS 532 +PGF + I+PII +++M + K+S +++ M ++FV Sbjct: 182 MCDIPGFNLTPIAIFPIIAAVTMILSYIFTQKLSGMGSQMQGSMKVMMWVMNLMFVSFCF 241 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + P G +Y+ SN+ I Q V K++ E Sbjct: 242 NAPVGFSLYYGVSNLFQIGQSFVTYKIYSPE 272 >gi|300174207|ref|YP_003773373.1| membrane protein OxaA [Leuconostoc gasicomitatum LMG 18811] gi|299888586|emb|CBL92554.1| Membrane protein oxaA 1 precursor [Leuconostoc gasicomitatum LMG 18811] Length = 279 Score = 157 bits (396), Expect = 6e-36, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 95/252 (37%), Gaps = 27/252 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +A ++ N+G+ I++ T+ ++ L PL Q S M+ +QP + Sbjct: 43 WSAVVAAFTSAILGASAWFGNNYGMGIIVFTILIRFLILPLMVYQIQSMMKMQIVQPALK 102 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L+ K+ Q++ LYK +NP A P+++Q+PV A+Y+ I S +R Sbjct: 103 ALQSKYPGKDTESRQLMMAEQQALYKDAGVNPFASMLPLIVQMPVLIALYQSIYNSQVLR 162 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F L DP I + L + ++ + P + Sbjct: 163 SGKFLWL--QLGNNDPYYILPILAALFTFASSWLST----------------QATPEQNG 204 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV------IMKMHGAEIGLID 568 + PVV F+ + P+ L +YW N+ +Q I + E+ Sbjct: 205 MTKAMPYIFPVVIFFSAIAVPSALSLYWVVGNLFQTIQTFFLQNPFKIRRQRELELQKER 264 Query: 569 RLRSTFSKNYNS 580 ++ K S Sbjct: 265 DMKRKIKKAKRS 276 >gi|228474911|ref|ZP_04059640.1| putative membrane protein [Staphylococcus hominis SK119] gi|228271143|gb|EEK12523.1| putative membrane protein [Staphylococcus hominis SK119] Length = 289 Score = 157 bits (396), Expect = 6e-36, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 120/263 (45%), Gaps = 36/263 (13%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVST----ANM 389 G+FY +PM ++ + +++ + +GIAI++ + ++++ P Y ++ M Sbjct: 30 GFFYNTFVEPMAKILHWLGHSVFHDDYGIAIIVLVLVIRIILLPFMLSNYKNSHMMREKM 89 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P+++ ++EK K++ Q + M+++YK ++INP+ GC P+L+Q+P+ Sbjct: 90 KIAKPEVEGVQEKVKRARTQEEKMAANQEMMEVYKKYDINPMKSALGCLPVLIQMPIVMG 149 Query: 443 IYKVISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ + + P + W +L D I + G+L F + Sbjct: 150 LYFVLRYRIGGGITEHPHFLWF-NLVHPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ K P + M++ P++ ++ S + L +YWS I+Q K + Sbjct: 192 AWVSSKQMPEEQRQMTYMMMIVSPIMIIWISLSSASALGLYWSVGAAFLIIQTFFANKHY 251 Query: 561 G--AEIGLIDRLRSTFSKNYNSQ 581 A+ + + + N N + Sbjct: 252 EKVAKQEIGPMVEAHKENNSNKK 274 >gi|261209462|ref|ZP_05923825.1| inner membrane protein [Enterococcus faecium TC 6] gi|289566873|ref|ZP_06447281.1| OxaA-like protein precursor [Enterococcus faecium D344SRF] gi|260076590|gb|EEW64354.1| inner membrane protein [Enterococcus faecium TC 6] gi|289161322|gb|EFD09214.1| OxaA-like protein precursor [Enterococcus faecium D344SRF] Length = 316 Score = 157 bits (396), Expect = 7e-36, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 107/251 (42%), Gaps = 32/251 (12%) Query: 342 IAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPKI 396 + PM ++Y N ++G A++ TV V+++ PL Q + + M+ ++P++ Sbjct: 42 LVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQVLKPQV 101 Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++K K + Q M Q+Y+ + ++ G C P+L+Q+P+F A+Y + Sbjct: 102 EAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYT 161 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +R + F+G DL + P+ + + L G++ P Sbjct: 162 EGIRESSFYGI--DLGS--PSMVLVAIAGGAYLLQGYISTIGIP---------------E 202 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 K +L P + VF S PAG+ +YW V S +Q + + + L ++ Sbjct: 203 EQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVIM--KPRLKAQV 260 Query: 571 RSTFSKNYNSQ 581 +N Q Sbjct: 261 AEELKQNPPKQ 271 >gi|257890476|ref|ZP_05670129.1| inner membrane protein [Enterococcus faecium 1,231,410] gi|257826836|gb|EEV53462.1| inner membrane protein [Enterococcus faecium 1,231,410] Length = 316 Score = 157 bits (396), Expect = 7e-36, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 108/251 (43%), Gaps = 32/251 (12%) Query: 342 IAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPKI 396 + PM ++Y N ++G A++ TV V+++ PL Q + + M+ ++P++ Sbjct: 42 LVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQV 101 Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++K K + Q M Q+Y+ + ++ G C P+L+Q+P+F A+Y + Sbjct: 102 EAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYT 161 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +R + F+ DL + P+ + + + + L G++ P Sbjct: 162 EGIRESSFYSI--DLGS--PSMVLVVIAGVAYLLQGYISTIGIP---------------E 202 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 K +L P + VF S PAG+ +YW V S +Q + M + L ++ Sbjct: 203 EQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQV 260 Query: 571 RSTFSKNYNSQ 581 +N Q Sbjct: 261 AEELKQNPPKQ 271 >gi|16079445|ref|NP_390269.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. 168] gi|221310308|ref|ZP_03592155.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. 168] gi|221314632|ref|ZP_03596437.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319555|ref|ZP_03600849.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. JH642] gi|221323831|ref|ZP_03605125.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. SMY] gi|321311869|ref|YP_004204156.1| OxaA-like protein [Bacillus subtilis BSn5] gi|1731070|sp|P54544|OXAA2_BACSU RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|1303958|dbj|BAA12613.1| YqjG [Bacillus subtilis] gi|2634823|emb|CAB14320.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. subtilis str. 168] gi|320018143|gb|ADV93129.1| OxaA-like protein precursor [Bacillus subtilis BSn5] Length = 275 Score = 157 bits (396), Expect = 7e-36, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 22/235 (9%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMK 390 G+F+ ++ +P L+ L G +G++I+L T+ V+++ PL Q+ M Sbjct: 38 GFFHDYLIEPFSALLKGVAGLFHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRIFQEKMA 97 Query: 391 NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYK 445 I+P++D ++ K K+ + LQ M++LY+ HNINPLA GC P+L+Q P+ +Y Sbjct: 98 VIKPQVDSIQVKLKKTKDPEKQKELQMEMMKLYQEHNINPLAMGCLPMLIQSPIMIGLYY 157 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I + E+ F + + +L + +++ + I LS Sbjct: 158 AIRSTPEIASHSFLW----FSLGQSDILMSLSAGIMYFVQAY-------IAQKLSAKYSA 206 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P A + +++ PV+ + PA L +YW S + VQ V+ H Sbjct: 207 VPQNPAAQQSAKLMVFIFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNIVLQMTH 261 >gi|294616351|ref|ZP_06696144.1| membrane protein OxaA 2 [Enterococcus faecium E1636] gi|291590865|gb|EFF22581.1| membrane protein OxaA 2 [Enterococcus faecium E1636] Length = 316 Score = 157 bits (396), Expect = 7e-36, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 32/251 (12%) Query: 342 IAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPKI 396 + PM ++Y N ++G A++ TV V+++ PL Q + + M+ ++P++ Sbjct: 42 LVHPMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQV 101 Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISIS 450 + ++K K + Q M Q+Y+ + ++ G C P+L+Q+P+F A+Y + Sbjct: 102 EAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYT 161 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +R + F+G DL + P+ + + + L G++ P Sbjct: 162 EGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGIP---------------E 202 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 K +L P + VF S PAG+ +YW V S +Q + M + L ++ Sbjct: 203 EQKKTMRTMLIVSPALIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQV 260 Query: 571 RSTFSKNYNSQ 581 K Q Sbjct: 261 AEELKKKPPKQ 271 >gi|322388371|ref|ZP_08061974.1| stage III sporulation protein J [Streptococcus infantis ATCC 700779] gi|321140684|gb|EFX36186.1| stage III sporulation protein J [Streptococcus infantis ATCC 700779] Length = 271 Score = 156 bits (395), Expect = 7e-36, Method: Composition-based stats. Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 21/222 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F F + + G+ I+L TV ++ + P+ + Q V++ M+ QP I E Sbjct: 33 FWSNLVYFFAETIRFLSFDVSIGLGIILFTVLIRTILLPVFQTQMVASRKMQEAQPLIKE 92 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L + +L+K I A WP+L+Q+P+ A+++ +S ++ Sbjct: 93 LRERYPGRDMESRTKLDQETRKLFKELGIKQSASFWPLLIQMPILLALFQALSNVDFLKT 152 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 F + +L AD T + + L +L ++ P + Sbjct: 153 GHFLWF--NLGGADTTFVLPILAALFTFLSSWLSNKALP----------------EKNGA 194 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ MPV+ F S P+G+ +YW+ SN + Q ++ Sbjct: 195 MTGMMYGMPVIIFFFAISAPSGVALYWAVSNAYQVFQTYLLN 236 >gi|227432921|ref|ZP_03914864.1| stage III sporulation protein J precursor [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351322|gb|EEJ41605.1| stage III sporulation protein J precursor [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 278 Score = 156 bits (395), Expect = 7e-36, Method: Composition-based stats. Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 21/223 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +A ++ N+G+ I+L T+F++ L PL Q S M+ +QP + Sbjct: 43 WSAIVAVFTRAILGASSWFGNNYGMGIILFTIFIRFLILPLMVYQVQSMMKMQVVQPALK 102 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 EL+ K+ Q++ LYK +NP A P+++Q+P+ A+Y+ I S +R Sbjct: 103 ELQAKYPGKDTESRQLMMAEQQALYKDAGVNPFASMLPLIVQMPILIALYQSIWNSPVLR 162 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F L + DP I + L + ++ S P + Sbjct: 163 SGKFLWL--QLGSNDPYFILPVLAALFTFASSWL----------------SMQSNPDQNG 204 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + PV+ F+ + P+ L +YW N VQ + Sbjct: 205 MTKAMPYIFPVIIFFSAVAVPSALSLYWVVGNAFQTVQTFFLQ 247 >gi|57901135|gb|AAW57888.1| albino3-like protein [Gonium pectorale] Length = 483 Score = 156 bits (395), Expect = 7e-36, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 26/257 (10%) Query: 337 GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GW +A + ++ ++ +G +I+L T+ VKLL +PL K+Q S ++ Sbjct: 106 GWVAPLADALEQVLYVLQEGLDKLHVPYTYGYSIILLTLIVKLLTYPLTKQQVESAMAVQ 165 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449 ++P+ID ++++F +V K LY+ +NPLAGC P L IP+F +Y ++ Sbjct: 166 ALKPRIDLIKDRFGDDKDKV-SKETSALYEAAGVNPLAGCLPTLATIPIFIGLYSSLTNV 224 Query: 450 -SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGI--------WPIIM 497 + A + WI LA + + LP G +G P+ + Sbjct: 225 ANAGSLDAEGFYWIPSLAGPTTLAMRQSGLGTSWLLPLVDGAPPIGWPEAAAYLSLPVAL 284 Query: 498 SLSMFIQMKMSPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + ++ PP D Q +L +P++ + + P+GL +Y+ + V+S Sbjct: 285 VAVQYASSALTSPPIDPKDENAGTQRALLVALPLMIGWFSLNVPSGLSLYYLSNTVLSAA 344 Query: 552 QQAVIMKMHGAEIGLID 568 Q + K+ GA + + + Sbjct: 345 TQVYLKKLGGANVKMNE 361 >gi|325688910|gb|EGD30918.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK115] Length = 271 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 99/223 (44%), Gaps = 22/223 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G++ + + + + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I Sbjct: 32 GFWEQLVYFFADTIRFL-SFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHI 90 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ + L + +LYK +NP A P+ +Q+PV A+++ ++ M Sbjct: 91 KRLQEKYPGKDMESRTALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDFM 150 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +L A DPT I L L +L ++ P + Sbjct: 151 KTG--HFLWLNLGATDPTFILPLLAALFTFLSTWLSNKALP----------------ERN 192 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 G +++ +PV F +G+ +YW+ SN +VQ ++ Sbjct: 193 GGMTVMMYLLPVAIFFFALYAASGVALYWAVSNAYQVVQTLLL 235 >gi|306830233|ref|ZP_07463416.1| ParB/SpoJ family partitioning protein [Streptococcus mitis ATCC 6249] gi|304427600|gb|EFM30697.1| ParB/SpoJ family partitioning protein [Streptococcus mitis ATCC 6249] Length = 277 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 104/249 (41%), Gaps = 29/249 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + YF A+ + F + + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I Sbjct: 43 FVYFFAEIIR-----FLSFDISIGVGIILFTILIRTILLPVFQTQIVASRKMQEAQPRIK 97 Query: 398 ELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L+E++ + L + M ++YK + + WPIL+Q+PV A+++ +S ++ Sbjct: 98 ALQEQYPGRDMESRTKLDQEMRKVYKELGVKHSSSIWPILIQMPVLLALFQALSRVEFLK 157 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 +L D + I + + +L ++ P Sbjct: 158 TG--HFLWVNLGGVDTSFILPILAAVFTFLSSWLSNKALPERSGA--------------- 200 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM---KMHGAEIGLIDRLR 571 ++ MPV+ S P+G+ +YW+ SN ++Q + K+ ++ R Sbjct: 201 -MTGMMYGMPVLIFIFAISAPSGVALYWAVSNAYQVLQTYFLNNPFKIIAEREAVVQAER 259 Query: 572 STFSKNYNS 580 K + Sbjct: 260 DLEGKKRRA 268 >gi|323452174|gb|EGB08049.1| hypothetical protein AURANDRAFT_11603 [Aureococcus anophagefferens] Length = 219 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 17/219 (7%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +VG++G+AI+L T+ +K + FPL +Q ST M+ +QP I ++ K+ P Q + Sbjct: 1 GVVGSYGVAIVLFTLLLKAVTFPLNYQQIESTTKMQALQPAIKRIQAKYAADPQQ-MNIM 59 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAPFWGWIKDLAAA----- 468 M +LY+ + +NPLAGC P L+QIP+F A+Y+ ++S++ E + WI +L Sbjct: 60 MAELYQENELNPLAGCLPALVQIPIFIALYRSLLSLAKEDLLEESFLWIPNLEGPVYGAQ 119 Query: 469 --DPTNIFTLF--GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ------AM 518 D F + I P + P ++ ++ + PPAD Sbjct: 120 NADWLFKFDQWNGAIPPLGWHDTVAYLALPCLLVVAQSASTTLLQPPADPNNEAAQTSNQ 179 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +L ++P++ F + PAGL IYW +N+I+ I Sbjct: 180 VLKYLPLMVGFFSLNVPAGLTIYWFCNNIITTASTLYIR 218 >gi|116491815|ref|YP_811359.1| preprotein translocase subunit YidC [Oenococcus oeni PSU-1] gi|116092540|gb|ABJ57694.1| Preprotein translocase subunit YidC [Oenococcus oeni PSU-1] Length = 286 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 102/261 (39%), Gaps = 30/261 (11%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVS 385 +P + G+ I + L GN +G I++ T+ ++ L PL S Sbjct: 33 VPNNASTVYKGFLGSITGFFANSILGVSKLCGNSYGFGIVIFTLLIRFLILPLMVYSISS 92 Query: 386 TANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 + NM + P + +++ K+K + LQ+ +YK +NP A P+L+Q+PV + Sbjct: 93 SKNMAKVAPLVKKVQAKYKGKRDRDSMTKLQEETSSIYKEAGVNPYASLLPVLIQLPVLW 152 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A+++ +S + ++ F+ L + DP + +F L Sbjct: 153 ALFQSVSSTPALKTGSFFWL--QLGSPDPYFVLPIFAALF-------------------T 191 Query: 502 FIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FI MS K Q + P + +F+ + + L +YW +N +VQ + Sbjct: 192 FISSWMSTASMGKDQPGFAKAMPYIFPFIILFSALAVSSALSLYWVATNAFQVVQTFFLQ 251 Query: 558 KMHGAEIGLIDRLRSTFSKNY 578 A + + + Sbjct: 252 NPFKARAEEKAKELAELERKK 272 >gi|323455292|gb|EGB11161.1| hypothetical protein AURANDRAFT_22501 [Aureococcus anophagefferens] Length = 366 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 116/225 (51%), Gaps = 20/225 (8%) Query: 346 MFMLMSYFYNLVG----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + L ++ +G ++GI+I+L T F++ + +PL Y ST K ++P +D++++ Sbjct: 50 IEGLHDGIHDGLGIKQNSWGISIILFTAFLRTVIYPLNFISYESTERNKALKPYMDKIKD 109 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAPFWG 460 ++ + Q + A +LY+ NPLAGC P + QIPVF A+Y+ V++++ + + + Sbjct: 110 RYGED-QQAVNLATAKLYEMTETNPLAGCLPAIAQIPVFIALYRSVLNLAFDQKIGEGFF 168 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--------WPIIMSLSMFIQMKMSPPPA 512 ++ +L N + + ++ G +G P+ + ++ I M++ PP Sbjct: 169 FVPNLEGPTYDNGRGIQWLTDNWVDGVPSLGWHDTLAFLALPVALVITQSISMRVLTPPP 228 Query: 513 DKGQA------MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 D +L ++P++ + ++ P+GL +YW SNV S+ Sbjct: 229 DPNDKSAQNANRVLKYLPLMIGWFSANVPSGLGLYWMTSNVFSVA 273 >gi|309799090|ref|ZP_07693343.1| membrane protein OxaA 1 [Streptococcus infantis SK1302] gi|308117325|gb|EFO54748.1| membrane protein OxaA 1 [Streptococcus infantis SK1302] Length = 277 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 28/227 (12%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G++ + + + + G+ I+L T+ ++ + P+ + Q V++ M+ +QP + Sbjct: 38 GFWSKFVYFFAETIRFL-SFDTSIGLGIILFTLLIRTILLPVFQIQMVASRKMQEVQPLV 96 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 ELRE++ + L + M QL+K H + A WPIL+Q+PV A+++ +S +E Sbjct: 97 KELRERYPGRDMESRTKLDQEMRQLFKQHGVKQSASLWPILIQMPVLLALFQALSR-VEF 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512 + WI +L D T + PI+ ++ F+ +S Sbjct: 156 LKTGHFLWI-NLGGVDTTFVL-------------------PILAAIFTFLSTWLSNKAMV 195 Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ MPV+ F P+G+ +YW+ SN ++Q ++ Sbjct: 196 EKNGAMTGMMYAMPVMIFFFAMYSPSGVALYWAVSNAYQVLQTYLLN 242 >gi|323340870|ref|ZP_08081121.1| membrane protein [Lactobacillus ruminis ATCC 25644] gi|323091721|gb|EFZ34342.1| membrane protein [Lactobacillus ruminis ATCC 25644] Length = 300 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 34/258 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G+ Y +A P + + NL+G + G AI+L T V+L+ P+ KQ + Sbjct: 33 YGFVYDHMAVPTQHFLVWLSNLMGGSLGWAIILLTFVVRLILMPVMLKQSRNATIQQEKI 92 Query: 390 KNIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +++P +D++ ++ + + + + ++ LY+ + I+ G C P+L+Q+P+F A+ Sbjct: 93 SHLKPLMDDIAKRQQAAQTDAEKMAISQELMSLYRDNGISMTGGIGCLPLLIQMPIFAAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ + F+G + + I T+ + L G+ I Sbjct: 153 YAAIQYSPELSKSYFYG----INLGHSSIILTILSFAAYALQGW---------------I 193 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M P K M++ PV+ PAGL +Y+ V + +Q +I M Sbjct: 194 SMLGMPKEQRKQMQMMMFMSPVMITVMTFVSPAGLGLYFFVGGVFACIQTLIINAM---R 250 Query: 564 IGLIDRLRSTFSKNYNSQ 581 + ++ K + Sbjct: 251 PKIKQQIAEELKKTPPKK 268 >gi|328956995|ref|YP_004374381.1| membrane protein OxaA [Carnobacterium sp. 17-4] gi|328673319|gb|AEB29365.1| membrane protein OxaA [Carnobacterium sp. 17-4] Length = 307 Score = 155 bits (393), Expect = 1e-35, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 117/254 (46%), Gaps = 33/254 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ Y F+ P ++ L+G ++G+AI++ T+ V+L+ PL Q M Sbjct: 34 GFIYEFLVVPTQQVIIQLAELLGGSYGLAIIVITLVVRLIILPLNLSQSKKSIIQQEKMA 93 Query: 391 NIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P+++E+++K K + Q+ ++ LYK +N++ L G C P+L+Q+P+F A++ Sbjct: 94 LIKPEMEEVQKKQKSAVTAEEKAAAQQELMSLYKDNNMSMLGGIGCLPLLIQMPIFTAMF 153 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + I++S E+ ++ F G + D + ++ + ++ Sbjct: 154 QAINLSKEIGNSTFLG----FSLGDQNIALAIAAGAVYF---------------VQSYVS 194 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M P K ++ P++ + + PAGL +YW + ++ Q + ++ + Sbjct: 195 MIGLPDEQKKQMRTMMYVSPIMILMVSFTSPAGLGLYWFVGGIFAVFQTLITNFIY--KP 252 Query: 565 GLIDRLRSTFSKNY 578 + ++ + K Sbjct: 253 RIKAQVEAEAKKRP 266 >gi|159477094|ref|XP_001696646.1| inner membrane ALBINO3-like protein 1 [Chlamydomonas reinhardtii] gi|158282871|gb|EDP08623.1| inner membrane ALBINO3-like protein 1 [Chlamydomonas reinhardtii] gi|294845969|gb|ADF43128.1| ALB3p [Chlamydomonas reinhardtii] Length = 495 Score = 155 bits (393), Expect = 1e-35, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 118/254 (46%), Gaps = 27/254 (10%) Query: 337 GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GW +A + ++ ++ ++G +I+L T+ VKLL +PL K+Q S ++ Sbjct: 112 GWVAPVADALEQVLYALQEGLDKLHVPYSYGYSIILLTLIVKLLTYPLTKQQVESAMAVQ 171 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449 ++P+ID ++++F + + +QK LY+ +NPLAGC P L IP+F ++ ++ Sbjct: 172 ALKPRIDLIKDRFGEDKDK-IQKETSVLYEQAGVNPLAGCLPTLATIPIFIGLFSSLTNV 230 Query: 450 -SLEMRHAPFWGWIKDLAAADPTNI----FTLFGILPFYLPGFMHVGI--------WPII 496 + + + ++ LA + + P G +G P++ Sbjct: 231 ANDGLLDTQGFYFVPSLAGPTTMAMRQSGLGTSWLWPLGPDGAPPIGWEDAAAYLTLPLL 290 Query: 497 MSLSMFIQMKMSPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 + + ++ PP D Q +L ++P++ + + PAGL +Y+ + V+S Sbjct: 291 LVAVQYASSSVTSPPIDPKDENANTQRALLVFLPLMVGWFSLNVPAGLSLYYLANTVLSS 350 Query: 551 VQQAVIMKMHGAEI 564 Q + K+ GA + Sbjct: 351 AIQIYLKKLGGANV 364 >gi|330468742|ref|YP_004406485.1| 60 kDa inner membrane insertion protein [Verrucosispora maris AB-18-032] gi|328811713|gb|AEB45885.1| 60 kDa inner membrane insertion protein [Verrucosispora maris AB-18-032] Length = 300 Score = 155 bits (393), Expect = 2e-35, Method: Composition-based stats. Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 26/227 (11%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++ + I+ + V+ + FP+ KQ + M+ +QP+I L+EK K + LQK +++L Sbjct: 42 SWVLGIVFLVLTVRAVLFPVFVKQIKAQRAMQALQPQIKALQEKHKDD-RETLQKELVEL 100 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLF 477 Y+ NPL GC P+L+QIPVF ++ V+ M + + D + TLF Sbjct: 101 YRAGQANPLMGCLPMLVQIPVFLGLFHVLRHLKPSMPEHMKTLYGWTVTQFDSASTATLF 160 Query: 478 GIL----------------PFYLPGFMHVGIWPIIMSLSMFIQMKMS--------PPPAD 513 G + + I +IM + ++ + P Sbjct: 161 GAPIAANFRSGTQELALLGADGVTVRVVAAILIVIMIATTYLSSRQMILRTGWAEDPQQK 220 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 Q ++L +P+ + + FP G+IIYW +N+ S+ QQ +++ + Sbjct: 221 MMQRLMLYGIPLSLLVSGLIFPIGVIIYWVTTNLFSLGQQTWVLRKY 267 >gi|310641889|ref|YP_003946647.1| oxaa-like protein [Paenibacillus polymyxa SC2] gi|309246839|gb|ADO56406.1| OxaA-like protein [Paenibacillus polymyxa SC2] Length = 277 Score = 155 bits (393), Expect = 2e-35, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 30/240 (12%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMK 390 G+F +++ P+ L+ + G +FG+AIM T V+L PL +Q + M Sbjct: 45 GFFNHYVVFPLSWLIQHLAQWFGGSFGLAIMTLTFIVRLALLPLMMRQTRAQQGMKRKMS 104 Query: 391 NIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYK 445 +QP +D +++K++ Q +Q+ M+ LYK H NPL GC PIL+Q+P+ +Y Sbjct: 105 AMQPDLDRIKKKYENKKDANSQQSMQQEMMSLYKEHQFNPLNIGCLPILIQLPILSGMYT 164 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I ++ E+ F P ++ + ++ + Sbjct: 165 AIRLTPELASHS-------------------FLWFRLGQPDWILAIVVAVVYLAQAKLSQ 205 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 K A++ P++ + PA + +YW+ S ++Q K + E Sbjct: 206 LQMTADQHKQFAIMGYLSPIMMAVFSFNAPAAMPLYWTVSGTFLLLQSLWFRKRYPIEEA 265 >gi|169632026|ref|YP_001705675.1| putative inner membrane protein translocase component YidC [Mycobacterium abscessus ATCC 19977] gi|169243993|emb|CAM65021.1| Membrane protein OxaA [Mycobacterium abscessus] Length = 361 Score = 155 bits (393), Expect = 2e-35, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 100/286 (34%), Gaps = 52/286 (18%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQY 383 + DW FI P+ +M +Y L + +++M ++ + + +Q Sbjct: 1 MFDWFNLGFIYYPVSGIMWVWYKLFAYLLGPKNFFAWALSVMFLVFTLRAILYKPFVRQI 60 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +T M+ +QP+I L++K+K Q + M +L + H NP+ GC P+L QIPVF + Sbjct: 61 RTTRQMQELQPQIKALQKKYKND-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGL 119 Query: 444 YKVISIS-----------------------------------LEMRHAPFWGWIKDLAAA 468 + V+ + AP + Sbjct: 120 FHVLRSFNRTTGGFGQVHMTVEANRATGNYFFSANDVANFLDANLFGAPLGATMIQTTGL 179 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-----NWM 523 D F + +P + G+ S + + SP Q I+ Sbjct: 180 DAFTEFNRLAVAGVSIPLMIIAGVATYFNSRASIA--RQSPEAQANPQTQIMNRLALYVF 237 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P+ V P +I+YW +N+ + QQ + E + Sbjct: 238 PLGVVVGGPFLPIAIILYWVSNNIWTFGQQHYVFNRIAKEEEEKKQ 283 >gi|213692302|ref|YP_002322888.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523763|gb|ACJ52510.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 296 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 103/249 (41%), Gaps = 25/249 (10%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVL 411 + + GIAIM + +++ PL Q +T M+ +QP+I ++ K+ + + Sbjct: 1 MPHSLGIAIMCLVLIIRICLLPLFFSQMRATQRMQVLQPQIQRIQRKYAARKDPRSKEAM 60 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR--HAPFWGWIKDLAAAD 469 Q+ ++ L + HN NPL C L+Q P+ +++ + +A I + A D Sbjct: 61 QREIMALQQRHNANPLGSCLLSLIQAPILCSLFYTLQSLPASAAGNAEPLSGIDRVMAGD 120 Query: 470 --PTNIFTLFGILPFYL----PGFMHVGIWPIIMSLSMFIQMKM----------SPPPAD 513 ++IF + F + +G+ +M L +F + P Sbjct: 121 IESSSIFGVRIADSFGTVVSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQF 180 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK---MHGAEIGLIDRL 570 + Q + P ++V + + P G+++YW +N+ + Q ++ G+E G Sbjct: 181 RTQKLTAFVFPAIYVVSGGTLPFGVLLYWLTNNLWNFGQTLCQLRWFPAPGSEAGERKAE 240 Query: 571 RSTFSKNYN 579 R +N Sbjct: 241 RDHERENRR 249 >gi|226326925|ref|ZP_03802443.1| hypothetical protein PROPEN_00785 [Proteus penneri ATCC 35198] gi|225204762|gb|EEG87116.1| hypothetical protein PROPEN_00785 [Proteus penneri ATCC 35198] Length = 235 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 85/242 (35%), Gaps = 24/242 (9%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +RN + + +S +I W+ V N Q +Q + + AV + Sbjct: 4 QRNLLFIALLFVSFLIWQQWEGDKV------SQNTTTTAQVSQQADVPSSDSLAVTGNSN 57 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 QA + +K L IN +G D+ +L Y +++S +P L + + Y Sbjct: 58 EQA----KLITVKTDVLDLRINTQGGTIDEADLLAYPAELNSTTPFRLL--ETTPQFLYQ 111 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + + S V++ + + + + F N + F +T L + Sbjct: 112 AQSGLIGPDGPDQ--KSRPVYSADKNEFVLGENQDELRVPMTFVNEEGVKFIKTFILKKG 169 Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFIAVLGDKSLVE 231 Y + + N + + + G++ + T ++ F + A Sbjct: 170 QYDISVDYKIENTTDKTLTMNFYGQLKQSVKLPESRDTGSSNFALHTYRGAAYSSDETNY 229 Query: 232 QK 233 +K Sbjct: 230 KK 231 >gi|194016676|ref|ZP_03055289.1| Oxa1 family cytochrome oxidase biogenesis protein [Bacillus pumilus ATCC 7061] gi|194011282|gb|EDW20851.1| Oxa1 family cytochrome oxidase biogenesis protein [Bacillus pumilus ATCC 7061] Length = 272 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 24/235 (10%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMK 390 G+F+ + +P L+ + N + +G++IM T+ V+LL FPL Q+ M Sbjct: 33 GFFHHYFVQPFSELIIWLANFFHDDYGLSIMFVTLIVRLLIFPLFANQFKKQRVMQEKMA 92 Query: 391 NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYK 445 ++P+IDE++ K K+ + LQ M+++YK +N+NPLA GC P+L+QIP+ Y Sbjct: 93 LVKPQIDEIQSKLKKTKEPEKQKELQMEMMKVYKENNVNPLAMGCLPMLIQIPIVLGFYS 152 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I + E+ F + +L D +L G M+ + + + Q Sbjct: 153 AIRSTPEIATHSFLWF--NLGQTD---------LLVAIFAGAMYFLQFYVTQRFAK--QS 199 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 A K ++ P++ +F + PA L +YW S ++ +Q ++ M+ Sbjct: 200 GTQTEAALKQAKVMGMIFPIMMLFISINAPAALPLYWMTSGLLLTIQTIILNVMY 254 >gi|291484826|dbj|BAI85901.1| OxaA-like protein precursor [Bacillus subtilis subsp. natto BEST195] Length = 275 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 22/235 (9%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMK 390 G+F+ ++ +P L+ L G +G++I+L T+ V+++ PL Q+ M Sbjct: 38 GFFHDYLIEPFSALLKGVAGLFHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRIFQEKMA 97 Query: 391 NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYK 445 I+P++D ++ K K+ + LQ M++LY+ +NINPLA GC P+L+Q P+ +Y Sbjct: 98 VIKPQVDSIQVKLKKTKDPEKQKELQMEMMKLYQENNINPLAMGCLPMLIQSPIMIGLYY 157 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I + E+ F + + +L + +++ + I LS Sbjct: 158 AIRSTPEIASHSFLW----FSLGQSDILMSLSAGIMYFVQAY-------IAQKLSAKYSA 206 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P A + +++ PV+ + PA L +YW S + VQ V+ H Sbjct: 207 VPQNPAAQQSAKLMVFIFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNIVLQMTH 261 >gi|332358080|gb|EGJ35912.1| stage III sporulation protein J [Streptococcus sanguinis SK49] Length = 271 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 100/223 (44%), Gaps = 22/223 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G++ + + + + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I Sbjct: 32 GFWEKLVYFFADTIRFL-SFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHI 90 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ + L + +LYK +NP A P+ +Q+PV A+++ ++ M Sbjct: 91 KQLQEKYPGKDMESRTALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDFM 150 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +L A DPT I L L + ++ P + Sbjct: 151 KTG--HFLWLNLGATDPTFILPLLAALFTFFSTWLSNKALP----------------ERN 192 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 G +++ MPVV F +G+ +YW+ SN +VQ ++ Sbjct: 193 GGMTVMMYLMPVVIFFFALYAASGVALYWAVSNAYQVVQTLLL 235 >gi|38372242|sp|Q8S339|ALB31_CHLRE RecName: Full=Inner membrane ALBINO3-like protein 1, chloroplastic; Flags: Precursor gi|20136422|gb|AAM11662.1|AF492768_1 albino3-like protein [Chlamydomonas reinhardtii] Length = 495 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 118/254 (46%), Gaps = 27/254 (10%) Query: 337 GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GW +A + ++ ++ ++G +I+L T+ VKLL +PL K+Q S ++ Sbjct: 112 GWVAPVADALEQVLYALQEGLDKLHVPYSYGYSIILLTLIVKLLTYPLTKQQVESAMAVQ 171 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449 ++P+ID ++++F + + +QK LY+ +NPLAGC P L IP+F ++ ++ Sbjct: 172 ALKPRIDLIKDRFGEDKDK-IQKETSVLYEQAGVNPLAGCLPTLATIPIFIGLFSSLTNV 230 Query: 450 -SLEMRHAPFWGWIKDLAAADPTNI----FTLFGILPFYLPGFMHVGI--------WPII 496 + + + ++ LA + + P G +G P++ Sbjct: 231 ANDGLLDTQGFYFVPSLAGPTTMAMRQSGLGTSWLWPLGPDGAPPIGWEDAAAYLTLPLL 290 Query: 497 MSLSMFIQMKMSPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 + + ++ PP D Q +L ++P++ + + PAGL +Y+ + V+S Sbjct: 291 LVAVQYASSSVTSPPIDPKDENANTQRALLVFLPLMVGWFSLNVPAGLSLYYLANTVLSS 350 Query: 551 VQQAVIMKMHGAEI 564 Q + K+ GA + Sbjct: 351 AIQIYLKKLGGANV 364 >gi|307297278|ref|ZP_07577084.1| membrane protein insertase, YidC/Oxa1 family [Thermotogales bacterium mesG1.Ag.4.2] gi|306916538|gb|EFN46920.1| membrane protein insertase, YidC/Oxa1 family [Thermotogales bacterium mesG1.Ag.4.2] Length = 448 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 25/259 (9%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWG---WFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 FAG + + + L D+G +F +I + + + Y GNFG A++ Sbjct: 195 FAGPMRLIHMRQALPEHYDAIVKDLQDFGGVTFFSWIYHGIVYFLFWLYQWSGNFGWALI 254 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 L T+ + + +PL Q S M+ +QP+++++++K+K P+ Q+AM+ LYK N Sbjct: 255 LFTIVTRFILYPLYHIQTKSMLMMRMLQPEVEKIKKKYKD--PRKQQEAMMALYKEKGYN 312 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 P +GC PILLQ+PV +Y I E M + P + KDL+ +PF + Sbjct: 313 PASGCLPILLQLPVLILLYNAIRYFSEVMAYTPGFLIWKDLSVG------NFVLNIPFII 366 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 + VGI+ ++ D A M V+F ++FP+GL++YW+ Sbjct: 367 IT-VVVGIFSSLL------------TAQDARSARSGVIMQVIFPILFATFPSGLLLYWTT 413 Query: 545 SNVISIVQQAVIMKMHGAE 563 +V+ V+ K +G + Sbjct: 414 QSVLQFFISWVVYKRNGIK 432 >gi|296167146|ref|ZP_06849553.1| membrane protein OxaA [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897468|gb|EFG77067.1| membrane protein OxaA [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 369 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 106/289 (36%), Gaps = 52/289 (17%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAK 380 E+L D+ F+ P+ +M +Y L + +++M ++ L + Sbjct: 1 MELLFDFFSLDFVYYPVSWIMWAWYKLFAAMLGPSNFFAWALSVMFLVFSLRALLYKPFV 60 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 +Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 61 RQIRTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVF 119 Query: 441 FAIYKVISIS-----------------------------------LEMRHAPFWGWIKDL 465 +Y V+ + AP ++ Sbjct: 120 IGLYHVLRSFNRTTGGFGQPHLSVAQNRLTGNYVFSPTDVGHFLDANLFGAPIGAFMTQR 179 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL----- 520 D F+ ++ P + GI S + + SP A Q ++ Sbjct: 180 TGLDAFTYFSRPAVIAVGAPVMILAGIATYFNSRASVA--RQSPEAAANPQTAMMNKLAL 237 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P+ V P +I+YW +N+ + QQ + M E + Sbjct: 238 YVFPLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQ 286 >gi|110802031|ref|YP_699906.1| putative inner membrane protein translocase component YidC [Clostridium perfringens SM101] gi|110682532|gb|ABG85902.1| membrane protein OxaA [Clostridium perfringens SM101] Length = 238 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 12/204 (5%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + + + I I L T+ V+L+ PL KQ S M+ IQP+I +L++K+K +P + Q Sbjct: 28 IFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIAKLQKKYKNNPEKA-Q 86 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +N+NP++GC P+L+Q+P+ FA+Y V E++ + W+ DL A D T Sbjct: 87 QEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFYGLGELKGVS-FLWLGDLWAPDRTF 145 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I + YL + ++ F Q + P + M + Sbjct: 146 ILPILSAATTYLSSLL----------MTKFTQSQTGGAPGGMNMNTMNIVMAGMMGVMSI 195 Query: 533 SFPAGLIIYWSWSNVISIVQQAVI 556 FP+ L++YW N+I +VQ I Sbjct: 196 QFPSMLVLYWVIGNLIQMVQTYFI 219 >gi|90962705|ref|YP_536621.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118] gi|90821899|gb|ABE00538.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118] Length = 279 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 22/224 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + ++ GN +G I++ T+ V+++ PL Q S +QPK+ Sbjct: 38 WDHYIVWNFIRAIQGLSHIFGNSYGWGIVIFTIIVRIIILPLMIYQMKSMRQTMELQPKL 97 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ Q+L K +LY INP A P+++Q+P+ FA+Y+ I S + Sbjct: 98 KALQEKYPGKDMESRQMLAKEQQKLYSEAGINPFASMLPLIVQMPILFALYQAIFRSDVL 157 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F+ L DP I + + +L ++ M+ P + Sbjct: 158 KSGTFFWM--QLGDKDPYYILPILAAIFTWLTSKLN----------------SMAQPEQN 199 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ MP++ + PA L +YW +N+ S Q +I Sbjct: 200 TITTVMTWSMPIMIFVFALNVPAALSLYWVITNLFSAGQTLLIN 243 >gi|168214845|ref|ZP_02640470.1| membrane protein OxaA [Clostridium perfringens CPE str. F4969] gi|169343448|ref|ZP_02864448.1| membrane protein OxaA [Clostridium perfringens C str. JGS1495] gi|169298400|gb|EDS80489.1| membrane protein OxaA [Clostridium perfringens C str. JGS1495] gi|170713745|gb|EDT25927.1| membrane protein OxaA [Clostridium perfringens CPE str. F4969] Length = 238 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 12/204 (5%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + + + I I L T+ V+L+ PL KQ S M+ IQP+I +L++K+K +P + Q Sbjct: 28 IFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIAKLQKKYKNNPEKA-Q 86 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +N+NP++GC P+L+Q+P+ FA+Y V + E++ + W+ DL A D T Sbjct: 87 QEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFTGLAELKGVS-FLWLGDLWAPDRTF 145 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I + YL + ++ F Q + P + M + Sbjct: 146 ILPILSAATTYLSSLL----------MTKFTQSQAGGAPGGMNMNTMNIVMAGMMGVMSI 195 Query: 533 SFPAGLIIYWSWSNVISIVQQAVI 556 FP+ L++YW N+I +VQ I Sbjct: 196 QFPSMLVLYWVIGNLIQMVQTYFI 219 >gi|322386704|ref|ZP_08060329.1| ParB/SpoJ family partitioning protein [Streptococcus cristatus ATCC 51100] gi|321269377|gb|EFX52312.1| ParB/SpoJ family partitioning protein [Streptococcus cristatus ATCC 51100] Length = 273 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 96/221 (43%), Gaps = 21/221 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F M F + G+ GI I+L T+ ++ + P+ + Q S+ M+ +QP I + Sbjct: 35 FWEKLVYFFAEMIQFLSFNGSTGIGIILFTLIIRTVLLPVFQFQTTSSRKMQEVQPHIKK 94 Query: 399 LREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 L+EK+ L + +LYK +NP A P+ +Q+PV A+++ ++ ++ Sbjct: 95 LQEKYPGKDMDSRAALAEETSKLYKEMGVNPYAAFLPLFIQMPVLVALFQALTRVEFLKT 154 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 +L DPT I + L + ++ P + G Sbjct: 155 G--HFLWLNLGTTDPTFILPILAALFTFFSTWLSNKALP----------------EKNGG 196 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 A++ MPV+ F +G+ +YW+ SN + Q ++ Sbjct: 197 TAVMTYLMPVLIFFFAVYAASGVALYWTVSNAYQVGQTLLL 237 >gi|227891666|ref|ZP_04009471.1| stage III sporulation protein J precursor [Lactobacillus salivarius ATCC 11741] gi|227866469|gb|EEJ73890.1| stage III sporulation protein J precursor [Lactobacillus salivarius ATCC 11741] Length = 263 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 28/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + ++ GN +G I++ T+ V+++ PL Q S +QPK+ Sbjct: 22 WDHYIVWNFIRAIQGLSHIFGNSYGWGIVIFTIIVRIIILPLMIYQMKSMRQTMELQPKL 81 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ Q+L K +LY INP A P+++Q+P+ FA+Y+ I S + Sbjct: 82 KALQEKYPGKDMESRQMLAKEQQKLYSEAGINPFASMLPLIVQMPILFALYQAIFRSDVL 141 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPP 510 + F+ L DP I PI+ ++ ++ K M+ P Sbjct: 142 KSGTFFWM--QLGDKDPYYIL-------------------PILAAVFTWLTSKLNSMAQP 180 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ MP++ + PA L +YW +N+ S Q +I Sbjct: 181 EQNTITTVMTWSMPIMIFVFALNVPAALSLYWVITNLFSAGQTLLIN 227 >gi|325686634|gb|EGD28660.1| stage III sporulation protein J [Streptococcus sanguinis SK72] Length = 271 Score = 155 bits (391), Expect = 3e-35, Method: Composition-based stats. Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 22/223 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G++ + + + + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I Sbjct: 32 GFWEKLVYFFADTIRFL-SFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHI 90 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L+EK+ + L + +LYK INP A P+ +Q+PV A+++ ++ M Sbjct: 91 KQLQEKYPGKDMESRTALAEETQKLYKEKGINPYASFIPLFIQMPVLLALFQALTRVDFM 150 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +L A DPT I L L + ++ P + Sbjct: 151 KTG--HFLWLNLGATDPTFILPLLAALFTFFSTWLSNKALP----------------ERN 192 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 G +++ MPVV F +G+ +YW+ SN +VQ ++ Sbjct: 193 GGMTVMMYLMPVVIFFFALYAASGVALYWAVSNAYQVVQTLLL 235 >gi|110801038|ref|YP_697348.1| putative inner membrane protein translocase component YidC [Clostridium perfringens ATCC 13124] gi|168211555|ref|ZP_02637180.1| membrane protein OxaA [Clostridium perfringens B str. ATCC 3626] gi|110675685|gb|ABG84672.1| membrane protein OxaA [Clostridium perfringens ATCC 13124] gi|170710464|gb|EDT22646.1| membrane protein OxaA [Clostridium perfringens B str. ATCC 3626] Length = 238 Score = 155 bits (391), Expect = 3e-35, Method: Composition-based stats. Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 19/228 (8%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + + + I I L T+ V+L+ PL KQ S M+ IQP+I +L++K+K +P + Q Sbjct: 28 IFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIAKLQKKYKNNPEKA-Q 86 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +N+NP++GC P+L+Q+P+ FA+Y V + E++ + W+ DL A D T Sbjct: 87 QEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFTGLTELQGVS-FLWLGDLWAPDRTF 145 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I + YL + ++ F Q + P + M + Sbjct: 146 ILPILSAATTYLSSLL----------MTKFTQSQAGGAPGGMNMNTMNIVMAGMMGVMSI 195 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 FP+ L++YW N+I +VQ I + L R R+ + Y Sbjct: 196 QFPSMLVLYWVIGNLIQMVQTYFI-------VVLPSRKRAKEKEQYKD 236 >gi|166032896|ref|ZP_02235725.1| hypothetical protein DORFOR_02617 [Dorea formicigenerans ATCC 27755] gi|166027253|gb|EDR46010.1| hypothetical protein DORFOR_02617 [Dorea formicigenerans ATCC 27755] Length = 358 Score = 155 bits (391), Expect = 3e-35, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 120/274 (43%), Gaps = 35/274 (12%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLV--------GNFGIAIMLTTVFVKLLFFPLAKK 381 +W I + +M++ Y ++ G GI+I+L T+ V L P+ Sbjct: 10 LLSAANWPIVGQICWVLGKVMNFIYTMLDGALPSDTGLVGISIILYTILVYTLMLPMTIN 69 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQI 437 Q S+ +QP++ +++K+K Q Q+ + Q+Y + ++ + GC P+L+Q+ Sbjct: 70 QQRSSKMQAVVQPEVMAIQKKYKNKKDQASMLKQQEEIQQVYDKYGVSMMGGCLPLLIQM 129 Query: 438 PVFFAIYKVISISLEM-----RHAPFWGWIKDLAAADPTNIFTL--FGILPFYLPGFMHV 490 P FA+Y VI + A + I D+ P N+ ++ G Y + + Sbjct: 130 PFLFALYPVIYSISDYVPNITAQANKFLTIPDMTIT-PGNMLSMAKSGETMGYSAAALVI 188 Query: 491 GI--WPIIMSLSMFIQMKMSPP------------PADKGQAMILNWMPVVFVFALSSFPA 536 P++ + + ++ MK+S P + MP+ + + + P Sbjct: 189 TAILLPVLSAFTQYLNMKLSMAVNGSNRPADKDDPTAATMRTMNMTMPLFSLVMVFTLPT 248 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 G+ IYW S ++ +VQQ I K H ++I + D + Sbjct: 249 GIGIYWIVSAIVRMVQQVFINK-HLSKISVDDMI 281 >gi|240168405|ref|ZP_04747064.1| putative inner membrane protein translocase component YidC [Mycobacterium kansasii ATCC 12478] Length = 381 Score = 155 bits (391), Expect = 3e-35, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 106/283 (37%), Gaps = 48/283 (16%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAK 380 +L D+ F+ P+ +M +Y L + +++M ++ L + Sbjct: 1 MSLLFDFFSLDFVYYPVSWIMWVWYKLFALIFGPSNFFAWALSVMFLVFTLRALLYKPFV 60 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 +Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 61 RQIRTTRQMQELQPQIKALQKKYGKD-RQRMAMEMQKLQREHGFNPILGCLPMLAQIPVF 119 Query: 441 FAIYKVISISLEMRHAP---------------FWGWIKDLAAADPTNIF----------- 474 +Y V+ + D+ N+F Sbjct: 120 LGLYHVLRSFNRTTGGFGQPQMSVVENRLTGNYVFTPTDVGHFLDANLFGAPIGASMTQR 179 Query: 475 -TLFGILPFYLPGFMHVG-IWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NW 522 L + F P + VG I+ ++ + + SP A Q ++ Sbjct: 180 GGLDAFVDFSRPAVIAVGVPVMILAGIATYFNSRASIARQSPEAAANPQTAMMNKLALYV 239 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+ V P +I+YW +N+ + QQ + M E Sbjct: 240 FPLGVVVGGPFLPLAIILYWFSNNIWTFAQQHYVFGMIEKEDE 282 >gi|182626422|ref|ZP_02954175.1| membrane protein OxaA [Clostridium perfringens D str. JGS1721] gi|177908296|gb|EDT70849.1| membrane protein OxaA [Clostridium perfringens D str. JGS1721] Length = 238 Score = 155 bits (391), Expect = 3e-35, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 12/204 (5%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + + + I I L T+ V+L+ PL KQ S M+ IQP+I +L++K+K +P + Q Sbjct: 28 IFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIAKLQKKYKNNPEKA-Q 86 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +N+NP++GC P+L+Q+P+ FA+Y V E++ + W+ DL A D T Sbjct: 87 QEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFYGLGELKGVS-FLWLGDLWAPDRTF 145 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I + YL + ++ F Q + P + M + Sbjct: 146 ILPILSAATTYLSSLL----------MTKFTQSQAGGAPGGMNMNTMNIVMAGMMGVMSI 195 Query: 533 SFPAGLIIYWSWSNVISIVQQAVI 556 FP+ L++YW N+I +VQ I Sbjct: 196 QFPSMLVLYWVIGNLIQMVQTYFI 219 >gi|294846010|gb|ADF43168.1| ALB3m [Chlamydomonas reinhardtii] Length = 493 Score = 155 bits (391), Expect = 3e-35, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 118/254 (46%), Gaps = 27/254 (10%) Query: 337 GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GW +A + ++ ++ ++G +I+L T+ VKLL +PL K+Q S ++ Sbjct: 110 GWVAPVADALEQVLYALQEGLDKLHVPYSYGYSIILLTLIVKLLTYPLTKQQVESAMAVQ 169 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449 ++P+ID ++++F + + +QK LY+ +NPLAGC P L IP+F ++ ++ Sbjct: 170 ALKPRIDLIKDRFGEDKDK-IQKETSVLYEQAGVNPLAGCLPTLATIPIFIGLFSSLTNV 228 Query: 450 -SLEMRHAPFWGWIKDLAAADPTNI----FTLFGILPFYLPGFMHVGI--------WPII 496 + + + ++ LA + + P G +G P++ Sbjct: 229 ANDGLLDTQGFYFVPSLAGPTTMAMRQSGLGTSWLWPLGPDGAPPIGWEDAAAYLTLPLL 288 Query: 497 MSLSMFIQMKMSPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 + + ++ PP D Q +L ++P++ + + PAGL +Y+ + V+S Sbjct: 289 LVAVQYASSSVTSPPIDPKDENANTQRALLVFLPLMVGWFSLNVPAGLSLYYLANTVLSS 348 Query: 551 VQQAVIMKMHGAEI 564 Q + K+ GA + Sbjct: 349 AIQIYLKKLGGANV 362 >gi|254777659|ref|ZP_05219175.1| putative inner membrane protein translocase component YidC [Mycobacterium avium subsp. avium ATCC 25291] Length = 353 Score = 154 bits (390), Expect = 3e-35, Method: Composition-based stats. Identities = 57/289 (19%), Positives = 107/289 (37%), Gaps = 52/289 (17%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAK 380 ++L D+ F+ P+ +M +Y L + +++M ++ L + Sbjct: 1 MDLLFDFFSLDFVYYPVSWIMWVWYKLFAAMLGPSNFFAWALSVMFLVFTLRALLYKPFV 60 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 +Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 61 RQIRTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVF 119 Query: 441 FAIYKVISIS-----------------------------------LEMRHAPFWGWIKDL 465 +Y V+ + AP ++ Sbjct: 120 LGLYHVLRSFNRTTGGFGQPHLSVVQNRLTGNYVFTPTDVGHFLDANLFGAPIGAFMTQR 179 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL----- 520 D F+ ++ LP + G+ S + + SP A Q ++ Sbjct: 180 TGLDAFTYFSRPAVIAVGLPVMILAGVATYFNSRASVA--RQSPEAAANPQTAMMNKLAL 237 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P+ V P +I+YW +N+ + QQ + M E + Sbjct: 238 YVFPLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQ 286 >gi|41410445|ref|NP_963281.1| putative inner membrane protein translocase component YidC [Mycobacterium avium subsp. paratuberculosis K-10] gi|38503196|sp|Q9L7M1|OXAA_MYCPA RecName: Full=Membrane protein oxaA gi|6969277|gb|AAF33698.1| unknown [Mycobacterium avium subsp. paratuberculosis] gi|41399279|gb|AAS06897.1| hypothetical protein MAP_4347c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 353 Score = 154 bits (390), Expect = 3e-35, Method: Composition-based stats. Identities = 57/289 (19%), Positives = 107/289 (37%), Gaps = 52/289 (17%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAK 380 ++L D+ F+ P+ +M +Y L + +++M ++ L + Sbjct: 1 MDLLFDFFSLDFVYYPVSWIMWVWYKLFAAMLGPSNFFAWALSVMFLVFTLRALLYKPFV 60 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 +Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 61 RQIRTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVF 119 Query: 441 FAIYKVISIS-----------------------------------LEMRHAPFWGWIKDL 465 +Y V+ + AP ++ Sbjct: 120 LGLYHVLRSFNRTTGGFGQPHLSVVQNRLTGNYVFTPTDVGHFLDANLFGAPIGAFMTQR 179 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL----- 520 D F+ ++ LP + G+ S + + SP A Q ++ Sbjct: 180 TGLDAFTYFSRPAVIAVGLPVMILAGVATYFNSRASVA--RQSPEAAANPQTAMMNKLAL 237 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P+ V P +I+YW +N+ + QQ + M E + Sbjct: 238 YVFPLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQ 286 >gi|300791163|ref|YP_003771454.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei U32] gi|299800677|gb|ADJ51052.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei U32] Length = 384 Score = 154 bits (390), Expect = 3e-35, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 100/259 (38%), Gaps = 41/259 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ ++ + G ++ + I+ T V+ + F Q S M Sbjct: 2 LDFIYYPVSFILWCWHKVFGFVFGEATAVSWILGIIFLTFTVRGIMFKPFVNQVRSMKKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ P++ ++++K+ Q M +L K H +NPL C P+LLQIPVF + V+ Sbjct: 62 QDFAPEMKKIQKKYAND-RQRQAAEMQKLQKEHGVNPLGSCLPMLLQIPVFIGLNHVLRA 120 Query: 450 SL------EMRHAPFWGWIKDLAAADPTNIFTL-----------------------FGIL 480 + ++ D+ + +F + + +L Sbjct: 121 FTMPPPGGGPKTENYFFTQADVHSYVSAKLFGVNLGEAVYNGVGVVSGGAANVGFQWSVL 180 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK--GQAMILNWMPVVFVFALSSFPAGL 538 P LP + I + + + + + + P+ + + FP GL Sbjct: 181 PVALPLMIVASIATHLTARHSVARQNAASATPQTAIMNKLTMYIFPLGVLVFGALFPLGL 240 Query: 539 IIYWSWSNVISIVQQAVIM 557 + YW +N +++QQ ++ Sbjct: 241 LFYWLANNGWTLMQQRLVY 259 >gi|270293445|ref|ZP_06199653.1| SpoJ protein [Streptococcus sp. M143] gi|270278107|gb|EFA23956.1| SpoJ protein [Streptococcus sp. M143] Length = 270 Score = 154 bits (390), Expect = 3e-35, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 97/223 (43%), Gaps = 26/223 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + YF A+ + F + + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I Sbjct: 37 FVYFFAEIIR-----FLSFDVSIGVGIILFTILIRTILLPVFQTQMVASRKMQEAQPRIK 91 Query: 398 ELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L+E++ + L + M ++YK + + WPIL+Q+PV A+++ ++ ++ Sbjct: 92 ALQEQYPGRDMESRTKLDQEMRKVYKELGVKHSSSLWPILIQMPVLLALFQALTRVDFLK 151 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 +L D + I + + +L ++ P Sbjct: 152 TG--HFLWVNLGGVDTSFILPILAAVFTFLSSWLSNKALPERSGA--------------- 194 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ MPV+ S P+G+ +YW+ SN ++Q + Sbjct: 195 -MTGMMYGMPVLIFIFAISSPSGVALYWAVSNAYQVLQTYFLN 236 >gi|301300482|ref|ZP_07206681.1| putative stage III sporulation protein J [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851929|gb|EFK79614.1| putative stage III sporulation protein J [Lactobacillus salivarius ACS-116-V-Col5a] Length = 263 Score = 154 bits (390), Expect = 4e-35, Method: Composition-based stats. Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 22/224 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + ++ GN +G I++ T+ V+++ PL Q S +QPK+ Sbjct: 22 WDHYIVWNFIRAIQGLSHIFGNSYGWGIVIFTIIVRIIILPLMIYQMKSMRQTMELQPKL 81 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ Q+L K +LY INP A P+++Q+P+ FA+Y+ I S + Sbjct: 82 KALQEKYPGKDMESRQMLAKEQQKLYSEAGINPFASILPLIVQMPILFALYQAIFRSDVL 141 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F+ L DP I + + +L ++ M+ P + Sbjct: 142 KSGTFFWM--QLGDKDPYYILPILAAIFTWLTSKLN----------------SMAQPEQN 183 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ MP++ + PA L +YW +N+ S Q +I Sbjct: 184 TITTVMTWSMPIMIFVFALNVPAALSLYWVITNLFSAGQTLLIN 227 >gi|311029446|ref|ZP_07707536.1| membrane protein OxaA [Bacillus sp. m3-13] Length = 256 Score = 154 bits (389), Expect = 4e-35, Method: Composition-based stats. Identities = 59/230 (25%), Positives = 114/230 (49%), Gaps = 27/230 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ + ++ + G++GI+I++ T+ ++ L PLA KQ + M+ ++P++ Sbjct: 34 WNHYFVYPLSLALTTVADWTSGSYGISIIIVTIAIRTLILPLALKQQKNMLAMQKLKPEM 93 Query: 397 DELR----EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 + L+ +K K + +Q+ ++ LY+TH +NP AGC+P+L+Q+PV A Y I + E Sbjct: 94 EALQKKYKDKKKPDDQKEMQQELMALYQTHKVNPAAGCFPMLIQMPVIMAFYYAIGRTTE 153 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPP 511 + F+ L DP I P++ +++ FIQ +++ Sbjct: 154 IAEHSFFWV--SLGQPDPLYIL-------------------PVVAAITTFIQTRVTLTDD 192 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 M++N +PV + A + P+ L +YW N+ I Q + K Sbjct: 193 VQPQMKMVMNIIPVFILIAGLTLPSALALYWVIGNLFGIGQGLYLKKRMK 242 >gi|299538281|ref|ZP_07051566.1| membrane protein oxaA precursor [Lysinibacillus fusiformis ZC1] gi|298726483|gb|EFI67073.1| membrane protein oxaA precursor [Lysinibacillus fusiformis ZC1] Length = 253 Score = 154 bits (389), Expect = 4e-35, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 31/245 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NM 389 G+FY KPM L+ +F N G++G+AI+ TV ++L+ P+ K Y M Sbjct: 28 GFFYSIFVKPMEFLLEFFGNDIFSGSYGLAIIAITVLIRLVLMPIMLKNYRQQQLMKTKM 87 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIY 444 +P+++ +++K K++ + Q+ M+ LY+ H INPL GC P+L+Q+P+ +Y Sbjct: 88 DAFKPEMEAVQKKMKEAKTKEEQTQYQQEMMALYQKHGINPLNMGCLPMLIQMPIIMGLY 147 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S +++ F + P + T+ + + + + + P Sbjct: 148 FSILYSADVKSHEFLW----FSLGSPDIVMTIVAGIVYLIQARVSLWTVP---------- 193 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M + P++ VF S A L +YWS S + I+Q + K + Sbjct: 194 -----EQQKAQMKMFIYISPIMIVFISMSSMAALPLYWSVSGALLIIQTYIGRKYYSEHP 248 Query: 565 GLIDR 569 + Sbjct: 249 EKAKK 253 >gi|229544288|ref|ZP_04433347.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1] gi|229325427|gb|EEN91103.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1] Length = 258 Score = 154 bits (389), Expect = 4e-35, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 38/247 (15%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKK----QYVSTANMK 390 G+F+ + P +++ L+ G++GIAI++ T+ ++L+ P Q + MK Sbjct: 32 GFFHHYFVSPFSVVIKATAQLLHGDYGIAIIVLTLIIRLILMPFMLHTFKKQQIMQDKMK 91 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 ++P++D+L+ K K + + LQ+ M+ LY+ H +NPL GC PI++Q+P+ Y Sbjct: 92 VLKPEMDKLQTKIKAAKTKEEQAKLQQEMMGLYQKHGVNPLNMGCLPIIIQMPILMGFYY 151 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ F F + +P I+ + FIQ Sbjct: 152 AIRGSKEIATHS----------------FLWFNLGQTDIP-------MAILAGVIYFIQA 188 Query: 506 KMS----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++S P K ++ P++ +F S PA L +YW+ S + I Q + K + Sbjct: 189 QISLIGIPEEQKKQMKYMMLMSPIMILFVSFSAPAVLPLYWTVSGLFMIGQTLIQKKFYQ 248 Query: 562 AEIGLID 568 + + Sbjct: 249 SHPPKEE 255 >gi|258655508|ref|YP_003204664.1| hypothetical protein Namu_5412 [Nakamurella multipartita DSM 44233] gi|258558733|gb|ACV81675.1| 60 kDa inner membrane insertion protein [Nakamurella multipartita DSM 44233] Length = 385 Score = 154 bits (389), Expect = 4e-35, Method: Composition-based stats. Identities = 54/286 (18%), Positives = 113/286 (39%), Gaps = 49/286 (17%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 +I P+ +M ++ + G + ++++ ++ + F KQ S M Sbjct: 8 LDYIYYPVSGIMWVWHKIFGAVLGPDQAITWVLSVIFLIFTLRAILFKPFMKQMESQLKM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + IQP++ +LREK+K Q L + M++L K +NPLA C P L+Q PVF ++ V+ + Sbjct: 68 QAIQPRMKQLREKYKDDK-QRLSEEMMKLNKEAGVNPLASCLPALIQAPVFIGLFHVLRM 126 Query: 450 SLEMRHAP----FWGWIKDLAAADPTNIFTLFGI------------------LPFYLPGF 487 + P W + +++ + ++ ++ G L F Sbjct: 127 FQPVNDGPGGPSVWFYRENVYFFNHADVVSMGGAKLPGGAPLVGYMTMQADQLAFMDGVR 186 Query: 488 MHVGIW----PIIMSLSMFI--------QMKMS-----PPPADKGQAMILNWMPVVFVFA 530 + W I+ ++ + Q +M+ P ++L P+ +F Sbjct: 187 EAIIWWGVPLTILAGIATHMTSRRSVARQAQMNVDAAANPQTAIMNKLMLYMFPLFVIFG 246 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 FP ++ YW +N + Q V ++ + ++ + Sbjct: 247 GPFFPLAILFYWLANNSWTFGQLYVAHRIQDRKALAQAQVVEEAKE 292 >gi|306791526|ref|ZP_07429828.1| membrane protein insertase, YidC/Oxa1 family [Mycobacterium tuberculosis SUMu005] gi|308339875|gb|EFP28726.1| membrane protein insertase, YidC/Oxa1 family [Mycobacterium tuberculosis SUMu005] Length = 394 Score = 154 bits (388), Expect = 5e-35, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 103/274 (37%), Gaps = 48/274 (17%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAK 380 +L D+ FI P+ +M +Y L + +++M ++ L + Sbjct: 1 MSLLFDFFSLDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFV 60 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 +Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 61 RQIRTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVF 119 Query: 441 FAIYKVISISLEMRHAPFWGWIK---------------DLAAADPTNIF----------- 474 +Y V+ + D+ N+F Sbjct: 120 LGLYHVLRSFNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQR 179 Query: 475 -TLFGILPFYLPGFMHVG-IWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NW 522 L + F P + VG I+ ++ + + S A Q ++ Sbjct: 180 SGLDAFVDFSRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYV 239 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P+ V P +I+YW +N+ + QQ + Sbjct: 240 FPLGVVVGGPFLPLAIILYWFSNNIWTFGQQHYV 273 >gi|289434661|ref|YP_003464533.1| SpoJ family translocase subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170905|emb|CBH27447.1| SpoJ family translocase subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 275 Score = 154 bits (388), Expect = 5e-35, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 35/260 (13%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKK----QYVSTANMK 390 G+F ++ +P + + + VG N+G+AI++TT+ ++ L PL + Q + M Sbjct: 32 GFFSTYLIQPFTSFIMFVASFVGDNYGVAIIITTLIIRALIMPLNMRTAKAQMGMQSKMA 91 Query: 391 NIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 +P+IDE++ + K + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y Sbjct: 92 VAKPEIDEIQARLKRATSKEEQATIQKEMMTVYSKYNINPMQMGCLPLLIQMPILMAFYY 151 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ A +L + D M + + ++ L+ + Sbjct: 152 AIRGSSEI--ASHSFLWFNLGSPD------------------MVLAVIAGLVYLAQYFVS 191 Query: 506 KMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH---G 561 + P K Q I+ M P++ +F + P+ L +YW+ + Q + K++ Sbjct: 192 MIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 E+ ++++ F + Q Sbjct: 252 PEVKIMEQEEKEFEQIVEEQ 271 >gi|289550293|ref|YP_003471197.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] gi|315660247|ref|ZP_07913102.1| SpoJ family protein [Staphylococcus lugdunensis M23590] gi|289179825|gb|ADC87070.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] gi|315494674|gb|EFU83014.1| SpoJ family protein [Staphylococcus lugdunensis M23590] Length = 291 Score = 154 bits (388), Expect = 5e-35, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 117/262 (44%), Gaps = 36/262 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVST----ANM 389 G+FY PM ++ + + + N +G+AI++ + ++++ P Y ++ M Sbjct: 30 GFFYNTFVDPMEKILHWLGSGIFNNDYGLAIIVLVLVIRIVLLPFMLSNYKNSHMMREKM 89 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P++ E++EK K++ Q + M+Q+YK ++INP+A GC P+L+Q+P+ Sbjct: 90 KVAKPEVSEVQEKVKRARTQEEKMAANQEMMQVYKKYDINPMASMLGCLPVLIQMPIVMG 149 Query: 443 IYKVISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ + + H P + W +L D I + G+L F + Sbjct: 150 LYFVLRYQIGGGITHHPHFLWF-NLVKPD-IWITAIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMK 558 +I K P + M++ P++ ++ A L +YWS S IVQ + Sbjct: 192 SYISTKTMPDEQRQMAYMMMIVSPIMIIWISYQSAAALGLYWSVSAAFLIVQTYFANMYY 251 Query: 559 MHGAEIGLIDRLRSTFSKNYNS 580 A+ + ++ + Sbjct: 252 SKRAKEEVAPMIKQYEKEKNQG 273 >gi|18311639|ref|NP_563573.1| putative inner membrane protein translocase component YidC [Clostridium perfringens str. 13] gi|168207740|ref|ZP_02633745.1| membrane protein OxaA [Clostridium perfringens E str. JGS1987] gi|168218053|ref|ZP_02643678.1| membrane protein OxaA [Clostridium perfringens NCTC 8239] gi|38503106|sp|Q8XH28|OXAA_CLOPE RecName: Full=Membrane protein oxaA gi|18146323|dbj|BAB82363.1| stage III sporulation protein J [Clostridium perfringens str. 13] gi|170660941|gb|EDT13624.1| membrane protein OxaA [Clostridium perfringens E str. JGS1987] gi|182379924|gb|EDT77403.1| membrane protein OxaA [Clostridium perfringens NCTC 8239] Length = 238 Score = 154 bits (388), Expect = 5e-35, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 12/204 (5%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + + + I I L T+ V+L+ PL KQ S M+ IQP+I +L++K+K +P + Q Sbjct: 28 IFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIAKLQKKYKNNPEKA-Q 86 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +N+NP++GC P+L+Q+P+ FA+Y V + E++ + W+ DL A D T Sbjct: 87 QEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFTGLTELQGVS-FLWLGDLWAPDRTF 145 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I + YL + ++ F Q + P + M + Sbjct: 146 ILPILSAATTYLSSLL----------MTKFTQSQAGGAPGGMNMNTMNIVMAGMMGVMSI 195 Query: 533 SFPAGLIIYWSWSNVISIVQQAVI 556 FP+ L++YW N+I +VQ I Sbjct: 196 QFPSMLVLYWVIGNLIQMVQTYFI 219 >gi|307702545|ref|ZP_07639498.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037] gi|307623891|gb|EFO02875.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037] Length = 289 Score = 154 bits (388), Expect = 5e-35, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 105/249 (42%), Gaps = 29/249 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I Sbjct: 37 FWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQMVASRKMQEAQPRIKA 96 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L + M ++YK I + WPIL+Q+PV A+++ +S ++ Sbjct: 97 LREQYPGRDMESRTKLDQEMRKVYKELGIKHSSSLWPILIQMPVLLALFQALSRVDFLKT 156 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + WI +L D + + PI+ ++ F+ +S + Sbjct: 157 G-HFLWI-NLGGVDTSFVL-------------------PILAAVFTFLSSWLSNKALSEK 195 Query: 516 QAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG--AEIGLIDRL 570 ++ MPV+ S P+G+ +YW+ SN ++Q + AE + + Sbjct: 196 SGATTGMMYGMPVLIFVFAISAPSGVALYWAVSNAYQVLQTYFLNNPFKIIAEREAVAQA 255 Query: 571 RSTFSKNYN 579 Sbjct: 256 EKDLEGKKR 264 >gi|167766868|ref|ZP_02438921.1| hypothetical protein CLOSS21_01385 [Clostridium sp. SS2/1] gi|167711416|gb|EDS21995.1| hypothetical protein CLOSS21_01385 [Clostridium sp. SS2/1] gi|291558407|emb|CBL37207.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [butyrate-producing bacterium SSC/2] Length = 333 Score = 154 bits (388), Expect = 5e-35, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 11/236 (4%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 G ++ Y+ + N G+ I+L T+ KL+ P+ KQ S ++ Sbjct: 15 GILAPFVIIFGWIIRAIYDGLAAMGIYNVGLCIILFTLVSKLILLPVTMKQQRSMKINQH 74 Query: 392 IQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +QP+I+++ +K++ Q Q+ M ++Y + +P GC P L+Q P+ A+Y VI Sbjct: 75 MQPEINKITKKYRNKRDQASMMKQQEEMQKVYAKYGSSPTGGCLPTLIQFPIIMALYYVI 134 Query: 448 S--ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + A + +L N F + P + + + SM Sbjct: 135 RGVNTYIPQIARDVQFKPNLFLGMDLNSAPGFRLTPLLIIPVLSFIFQFLSAKTSMSTTQ 194 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P ++ MP++ S P G+ +YWS S + +QQ + Sbjct: 195 MDDSTPGAGMTKSMMYTMPLMSFVMCISLPIGIGLYWSASALFQYIQQVAFNYHYD 250 >gi|157692895|ref|YP_001487357.1| OxaA-like protein precursor [Bacillus pumilus SAFR-032] gi|157681653|gb|ABV62797.1| Oxa1 family cytochrome oxidase biogenesis protein [Bacillus pumilus SAFR-032] Length = 272 Score = 154 bits (388), Expect = 6e-35, Method: Composition-based stats. Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 24/235 (10%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMK 390 G+F+ + +P L+ + N + +G++IM T+ V+LL FPL Q+ M Sbjct: 33 GFFHHYFVQPFSELIIWLANFFHDDYGLSIMFVTLIVRLLIFPLFANQFKKQRVMQEKMA 92 Query: 391 NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYK 445 ++P+ID+++ K K+ + LQ M+++YK +N+NPLA GC P+L+QIP+ Y Sbjct: 93 LVKPQIDDIQSKLKKTKEPEKQKELQMEMMKVYKENNVNPLAMGCLPMLIQIPIVLGFYS 152 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I + E+ F + +L D +L G M+ + + + Q Sbjct: 153 AIRSTPEIATHSFLWF--NLGQTD---------LLVAIFAGAMYFLQFYVTQRFAK--QS 199 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 A K ++ P++ +F + PA L +YW S ++ VQ ++ M+ Sbjct: 200 GTQTEAALKQAKVMGMIFPIMMLFISINAPAALPLYWMTSGLLLTVQTIILNVMY 254 >gi|222152571|ref|YP_002561746.1| OxaA-like protein [Streptococcus uberis 0140J] gi|222113382|emb|CAR41025.1| membrane protein OxaA 2 precursor [Streptococcus uberis 0140J] Length = 307 Score = 154 bits (388), Expect = 6e-35, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 104/252 (41%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + + KPM ++YF N VG FG+AI++ T+ V+ L PL Q + M + Sbjct: 37 IWDLLGKPMSYFINYFANNVGLGFGLAIIIVTIIVRTLILPLGLYQSWKASYQSEKMAFL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P D + +K K + Q Q ++ + + IN L G C P+L+Q+P F A+Y Sbjct: 97 KPIFDPINQKMKNATTQEEKLAAQTELMAAQRENGINMLGGMGCLPLLIQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G + + GI ++ ++ M+ Sbjct: 157 ALHTKGISTSTFMG-------------------IDLGSRSLVLTGIIAVLYYFQSWLSMQ 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 ++ MP++ +F S PAG+ +YW SI+QQ + + + L Sbjct: 198 AVAEEQRAQMKTMMYTMPIMMIFMTLSLPAGVGLYWLVGGFFSIIQQLITT--YVLKPKL 255 Query: 567 IDRLRSTFSKNY 578 ++ F N Sbjct: 256 RQQIEEEFKNNP 267 >gi|294790220|ref|ZP_06755378.1| membrane protein OxaA [Scardovia inopinata F0304] gi|294458117|gb|EFG26470.1| membrane protein OxaA [Scardovia inopinata F0304] Length = 330 Score = 153 bits (387), Expect = 6e-35, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 113/255 (44%), Gaps = 35/255 (13%) Query: 336 WGWFYFIAKPM----FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL----------AKK 381 +GWFY I +P+ ++ +F++++ G+ +V + + K Sbjct: 8 FGWFYTILRPLEIALTYVIKFFHDILTAIGVIGGQGVAWVISVMLLVVLVRLLILPLFIK 67 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQI 437 Q VS NM+ +QP++ +++ K+K Q + + ++LY+ ++ NP C P LLQ Sbjct: 68 QMVSMRNMQAMQPQLQKIQRKYKGKNDQASREAMSRETMKLYQENHANPAGSCLPALLQS 127 Query: 438 PVFFAIYKVISISLEMR-------HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 PVF A++ +S + A + A A NI G + + Sbjct: 128 PVFMAMFYTLSAVTYIANGQRGPLGAFNKEVSTEFANAKVFNITLASMFNSEDTGGKITI 187 Query: 491 GIWPIIMSLSMFIQM-----KMSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLII 540 GI+ +M L+MF + P + +G Q + P++++F+ +FP +++ Sbjct: 188 GIFVALMCLTMFYSQWHNVRRNMPRTSMQGNSYRTQMAMSFIFPIMYIFSGITFPFAVLV 247 Query: 541 YWSWSNVISIVQQAV 555 YW +N+ ++ Q Sbjct: 248 YWLTNNMWTLGQTFW 262 >gi|269216520|ref|ZP_06160374.1| inner membrane protein OxaA [Slackia exigua ATCC 700122] gi|269130049|gb|EEZ61131.1| inner membrane protein OxaA [Slackia exigua ATCC 700122] Length = 254 Score = 153 bits (387), Expect = 6e-35, Method: Composition-based stats. Identities = 61/215 (28%), Positives = 118/215 (54%), Gaps = 6/215 (2%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F + +FYN+VG++G+AI++ TV +++ P+ KQ S+ M+ +QP ++E++ KF Sbjct: 9 IFACVQFFYNIVGDWGLAIIIITVIFRIIVAPIMHKQSKSSYQMQKMQPLMNEIQTKFAD 68 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRHAPFWGWIK 463 P + +Q+ M ++Y NPLAGC P+LLQ+P+F A+++ + S E F+G + Sbjct: 69 DPTR-MQEEMQKMYAETKFNPLAGCLPMLLQMPIFMAMFQTLRNIGSYEDTSYTFYGLVP 127 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL AA T G ++P + + ++ + + M +Q + ++ M Sbjct: 128 DLTAAPSTMFSQGIGA---FIPYLILMLVFALATFMPMILQNIKNDSKQRNQMLIMGVIM 184 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+ ++ PAG++++W S++ I QQ + + Sbjct: 185 TVMMLWISWGSPAGVLLFWGVSSIFGIAQQQLTNR 219 >gi|70725945|ref|YP_252859.1| lipoprotein [Staphylococcus haemolyticus JCSC1435] gi|82593013|sp|Q4L7X2|OXAA_STAHJ RecName: Full=Membrane protein oxaA; Flags: Precursor gi|68446669|dbj|BAE04253.1| lipoprotein precursor [Staphylococcus haemolyticus JCSC1435] Length = 291 Score = 153 bits (387), Expect = 6e-35, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 121/262 (46%), Gaps = 37/262 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVST----ANM 389 G+FY +PM ++ + + V N +GIAI++ + ++++ P Y ++ M Sbjct: 30 GFFYNTFVEPMSKVLHWLGHSVFNDDYGIAIIVLVLVIRIILLPFMLSNYKNSHLMREKM 89 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P++D ++EK K++ Q + M+++YK ++INP+ GC P+L+Q+PV Sbjct: 90 KVAKPEVDGVQEKVKRARTQEEKMAANQEMMEVYKKYDINPMKSALGCLPVLIQMPVVMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ + + P + W +L D I + G+L F + Sbjct: 150 LYFVLRYRIGGGIAEHPHFLWF-NLIHPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ K P + M++ P++ ++ S + L +YWS S +VQ M+ Sbjct: 192 AWVSSKQMPQEQRQMTYMMMIVSPIMIIWISLSSASALGLYWSVSAAFLVVQTYFAN-MY 250 Query: 561 GAEIGLIDR--LRSTFSKNYNS 580 ++ + + F +N ++ Sbjct: 251 YEKVAQREVAPMIEKFKENNSN 272 >gi|116872811|ref|YP_849592.1| OxaA-like protein precursor [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741689|emb|CAK20813.1| oxaA/SpoIIIJ family membrane protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 275 Score = 153 bits (387), Expect = 6e-35, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 35/260 (13%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMK 390 G+F ++ +P + + + VG N+G+AI++TT+ ++ L PL K Q + M Sbjct: 32 GFFSTYLIQPFTSFIMFVASFVGDNYGVAIIITTLLIRALIMPLNLRTAKAQMGMQSKMA 91 Query: 391 NIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 +P+IDE++ + K + +QK M+ +Y +NINPL GC P+L+Q+P+ A Y Sbjct: 92 VAKPEIDEIQARLKRATSKEEQATIQKEMMTVYSKYNINPLQMGCLPLLIQMPILMAFYY 151 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ A +L +D M + I ++ L+ + Sbjct: 152 AIRGSSEI--ASHTFLWFNLGESD------------------MVLAIIAGLVYLAQYFVS 191 Query: 506 KMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH---G 561 + P K Q I+ M P++ +F + P+ L +YW+ + Q + K++ Sbjct: 192 MIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 EI ++++ F + + Q Sbjct: 252 PEIKVMEQEEKEFEQIVDEQ 271 >gi|296110738|ref|YP_003621119.1| cell division protein [Leuconostoc kimchii IMSNU 11154] gi|295832269|gb|ADG40150.1| cell division protein [Leuconostoc kimchii IMSNU 11154] Length = 279 Score = 153 bits (387), Expect = 7e-35, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 92/248 (37%), Gaps = 23/248 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +A ++ N+G+ I++ T+ ++ L PL Q S M+ +QP + Sbjct: 43 WSAVVAAFTSAILGASGWFGNNYGVGIIVFTILIRFLILPLMVYQIQSMMKMQIVQPALK 102 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L+ K+ Q++ LYK +NP A P+++Q+PV A+Y+ I S ++ Sbjct: 103 ALQAKYPGKDTESRQLMMAEQQALYKDAGVNPFASMLPLIVQMPVLIALYQSIYNSPVLK 162 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 F L DP + + L + ++ + P + Sbjct: 163 SGKFLWL--QLGNNDPYYVLPILAALFTFASSWLST----------------QATPEQNA 204 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK--MHGAEIGLIDRLRS 572 + PVV F+ + P+ L +YW N+ +Q + + L + Sbjct: 205 MTKAMPYIFPVVIFFSAMAVPSALSLYWVVGNLFQTIQTFALQNPFKLRRQRELKAQKER 264 Query: 573 TFSKNYNS 580 + Sbjct: 265 DLQRKIKK 272 >gi|300215289|gb|ADJ79705.1| 60 kDa inner membrane protein [Lactobacillus salivarius CECT 5713] Length = 279 Score = 153 bits (387), Expect = 8e-35, Method: Composition-based stats. Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 22/224 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + ++ GN +G I++ T+ V+++ PL Q S +QPK+ Sbjct: 38 WDHYIVWNFIRAIQGLSHIFGNSYGWGIVIFTIIVRIIILPLMIYQMKSMRQTMELQPKL 97 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+ K+ Q+L K +LY INP A P+++Q+P+ FA+Y+ I S + Sbjct: 98 KALQGKYPGKDMESRQMLAKEQQKLYSEAGINPFASMLPLIVQMPILFALYQAIFRSDVL 157 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F+ L DP I + + +L ++ M+ P + Sbjct: 158 KSGTFFWM--QLGDKDPYYILPILAAIFTWLTSKLN----------------SMAQPEQN 199 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ MP++ + PA L +YW +N+ S Q +I Sbjct: 200 TITTVMTWSMPIMIFVFALNVPAALSLYWVITNLFSAGQTLLIN 243 >gi|331265592|ref|YP_004325222.1| preprotein translocase subunit YidC1 [Streptococcus oralis Uo5] gi|326682264|emb|CBY99881.1| preprotein translocase subunit YidC1 [Streptococcus oralis Uo5] Length = 277 Score = 153 bits (386), Expect = 8e-35, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 105/249 (42%), Gaps = 29/249 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I Sbjct: 39 FWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQMVASRKMQEAQPRIKA 98 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L + M ++YK I + WPIL+Q+PV A+++ +S ++ Sbjct: 99 LREQYPGRDMESRTKLDQEMRKVYKELGIKHSSSLWPILIQMPVLLALFQALSRVDFLKT 158 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + WI +L D + + PI+ ++ F+ +S + Sbjct: 159 G-HFLWI-NLGGVDTSFVL-------------------PILAAVFTFLSSWLSNKALSEK 197 Query: 516 QAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG--AEIGLIDRL 570 ++ MPV+ S P+G+ +YW+ SN ++Q + AE + + Sbjct: 198 SGATTGMMYGMPVLIFVFAISAPSGVALYWAVSNAYQVLQTYFLNNPFKIIAEREAVAQA 257 Query: 571 RSTFSKNYN 579 Sbjct: 258 EKDLEGKKR 266 >gi|317499291|ref|ZP_07957564.1| YidC/Oxa1 family membrane protein insertase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893460|gb|EFV15669.1| YidC/Oxa1 family membrane protein insertase [Lachnospiraceae bacterium 5_1_63FAA] Length = 336 Score = 153 bits (386), Expect = 8e-35, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 11/236 (4%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 G ++ Y+ + N G+ I+L T+ KL+ P+ KQ S ++ Sbjct: 18 GILAPFVIIFGWIIRAIYDGLAAMGIYNVGLCIILFTLVSKLILLPVTMKQQRSMKINQH 77 Query: 392 IQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +QP+I+++ +K++ Q Q+ M ++Y + +P GC P L+Q P+ A+Y VI Sbjct: 78 MQPEINKITKKYRNKRDQASMMKQQEEMQKVYAKYGSSPTGGCLPTLIQFPIIMALYYVI 137 Query: 448 S--ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + A + +L N F + P + + + SM Sbjct: 138 RGVNTYIPQIARDVQFKPNLFLGMDLNSAPGFRLTPLLIIPVLSFIFQFLSAKTSMSTTQ 197 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P ++ MP++ S P G+ +YWS S + +QQ + Sbjct: 198 MDDSTPGAGMTKSMMYTMPLMSFVMCISLPIGIGLYWSASALFQYIQQVAFNYHYD 253 >gi|317133706|ref|YP_004093020.1| membrane protein insertase, YidC/Oxa1 family [Ethanoligenens harbinense YUAN-3] gi|315471685|gb|ADU28289.1| membrane protein insertase, YidC/Oxa1 family [Ethanoligenens harbinense YUAN-3] Length = 405 Score = 153 bits (386), Expect = 8e-35, Method: Composition-based stats. Identities = 73/305 (23%), Positives = 125/305 (40%), Gaps = 64/305 (20%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F I P+ L+ + Y L N+G+AI+L T+ +++L PLA KQ S A+ +QPK+ Sbjct: 9 IFDIINIPLGFLLRFCYQLTNNYGLAIILLTLIIRILLVPLAVKQQKSMAHTVRLQPKLQ 68 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-------- 449 L++K + Q LQ+ ++LY+ NP+ GC P+L Q+P+ + +Y VI Sbjct: 69 ALQKKHANNK-QKLQEEQMKLYQEEGANPMGGCLPLLFQLPILYGLYNVIYHPLLYIVQL 127 Query: 450 -------------------------------------SLEMRHAPFWGWIKDLAAADPTN 472 +E+ A D + P N Sbjct: 128 SVDVKNRVVYDLFSILKTTYPSVFGKMSTPSQALSNGQVEIYAAKLMPNHMDKLSFLPAN 187 Query: 473 IFTL---FGILPFYLPGFMHVGIW---PIIMSLSMFIQMKMS-----------PPPADKG 515 + L F L + + I+ PI LS FIQ+ +S P G Sbjct: 188 VLKLDFNFLGLDLSVVPGWQISIYLLIPIFCYLSSFIQVWLSTRINKENNIAANAPGTGG 247 Query: 516 QAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 + ++ MP++ + S P+G+ +YW SN+I + Q ++ K + + R + Sbjct: 248 MNIGMMLIMPLMSAYISISVPSGVGLYWIASNLIMLAQILLLNKFYNPKELAEKYDRESE 307 Query: 575 SKNYN 579 + Sbjct: 308 HRKRE 312 >gi|134097490|ref|YP_001103151.1| putative inner membrane protein translocase component YidC [Saccharopolyspora erythraea NRRL 2338] gi|133910113|emb|CAM00226.1| 60 kDa membrane insertion protein [Saccharopolyspora erythraea NRRL 2338] Length = 342 Score = 153 bits (386), Expect = 8e-35, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 99/264 (37%), Gaps = 33/264 (12%) Query: 346 MFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 M ++ +++ + G + +++ ++++ A Q + M+ P+I Sbjct: 1 MSAILWFWHKIFGFVLGPDNGFAWALSVFFLVFSLRVVLLKPAISQMRAGRKMQKFAPQI 60 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +LREK K Q + + M +L H +NPL GC P LLQIPVF +++ V+ + Sbjct: 61 QKLREKHKND-RQRMAQEMQKLQSEHGVNPLGGCLPALLQIPVFLSLFTVLRDFKPGAPS 119 Query: 457 PFWGWIKDLAAADPTNIFTL------------FGILPFYLPGFMHVG-IWPIIMSLSMFI 503 + + + +IF + + VG II S++ F Sbjct: 120 NYIFDADGVRSFVEADIFGAKLSNWIVQSDQELALFGTTRTDMIMVGVPLMIIASVATFF 179 Query: 504 QMK----------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M+ M+ P +++ PV + + P +++YW +N ++ Q Sbjct: 180 SMRISMKRQTEAAMANPQTAMMGKLMMYIAPVGAIVSGPFLPIAVLLYWMANNFWTLGQA 239 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKN 577 + E K Sbjct: 240 HFLTNKIDREEQKAKEAEIAAKKE 263 >gi|167748061|ref|ZP_02420188.1| hypothetical protein ANACAC_02805 [Anaerostipes caccae DSM 14662] gi|317472414|ref|ZP_07931739.1| YidC/Oxa1 family membrane protein insertase [Anaerostipes sp. 3_2_56FAA] gi|167652053|gb|EDR96182.1| hypothetical protein ANACAC_02805 [Anaerostipes caccae DSM 14662] gi|316900134|gb|EFV22123.1| YidC/Oxa1 family membrane protein insertase [Anaerostipes sp. 3_2_56FAA] Length = 331 Score = 153 bits (386), Expect = 9e-35, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 20/238 (8%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 G I +M + YN + N G+ I+L T+ KL+ FPL KQ S + Sbjct: 14 GLLSPIVWVFGEIMKWIYNGLSAVGIENLGLCIILFTLISKLIIFPLTIKQQRSMKINQV 73 Query: 392 IQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP++ ++++K++ Q Q+ M ++Y + +P GC L+Q P+ A+Y V+ Sbjct: 74 AQPEMMKIQKKYRGKRDQASMMKQQEEMQKVYDKYGTSPTGGCATTLIQFPIIMALYYVV 133 Query: 448 S----ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + + + + P +++ I+P F ++ S + Sbjct: 134 RNLEGYIPNIPKSAYEFVLGINIQNTPGFKLSIYLIIPLLSAFFQYL-------SARTSM 186 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 S PA ++ MP++ +F + P G+ IYW+ S V VQQ +I + Sbjct: 187 ADMDSDNPAAGMSKNMMLMMPIMSLFMCITLPVGIGIYWTASAVFQWVQQILINNYYN 244 >gi|293364547|ref|ZP_06611270.1| SpoJ protein [Streptococcus oralis ATCC 35037] gi|322376167|ref|ZP_08050675.1| SpoIIIJ family protein [Streptococcus sp. C300] gi|291316959|gb|EFE57389.1| SpoJ protein [Streptococcus oralis ATCC 35037] gi|321278849|gb|EFX55894.1| SpoIIIJ family protein [Streptococcus sp. C300] Length = 277 Score = 153 bits (386), Expect = 9e-35, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 105/249 (42%), Gaps = 29/249 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I Sbjct: 39 FWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQMVASRKMQEAQPRIKA 98 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L + M ++YK I + WPIL+Q+PV A+++ +S ++ Sbjct: 99 LREQYPGRDMESRTKLDQEMRKVYKELGIKHSSSLWPILIQMPVLLALFQALSRVDFLKT 158 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + WI +L D + + PI+ ++ F+ +S + Sbjct: 159 G-HFLWI-NLGGVDTSFVL-------------------PILAAVFTFLSSWLSNKALSEK 197 Query: 516 QAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG--AEIGLIDRL 570 ++ MPV+ S P+G+ +YW+ SN ++Q + AE + + Sbjct: 198 SGATTGMMYGMPVLIFVFAISAPSGVALYWAVSNAYQVLQTYFLNNPFKIIAEREAVAQA 257 Query: 571 RSTFSKNYN 579 Sbjct: 258 EKDLEGKKR 266 >gi|254818675|ref|ZP_05223676.1| putative inner membrane protein translocase component YidC [Mycobacterium intracellulare ATCC 13950] Length = 362 Score = 153 bits (386), Expect = 9e-35, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 104/280 (37%), Gaps = 52/280 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F+ P+ +M +Y L + + +++M ++ L + +Q +T M Sbjct: 8 LDFVYYPVSWIMWVWYKLFASMLGPSNFFAWALSVMFLVFSLRALLYKPFVRQIRTTRQM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF +Y V+ Sbjct: 68 QELQPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVFIGLYHVLRS 126 Query: 450 S-----------------------------------LEMRHAPFWGWIKDLAAADPTNIF 474 + AP ++ D +F Sbjct: 127 FNRTTGGFGQPHLSVAENRLTGNYVFTPTDVAHFLDANLFGAPIGAFMTQRTGLDAFTVF 186 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-----NWMPVVFVF 529 + ++ LP + G+ S + + SP A Q ++ P+ V Sbjct: 187 SRPAVIAVGLPVMILAGVATYFNSRASVA--RQSPEAAANPQTAMMNKLALYVFPLGVVV 244 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P +I+YW +N+ + QQ + M E + Sbjct: 245 GGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQ 284 >gi|242032277|ref|XP_002463533.1| hypothetical protein SORBIDRAFT_01g001520 [Sorghum bicolor] gi|241917387|gb|EER90531.1| hypothetical protein SORBIDRAFT_01g001520 [Sorghum bicolor] Length = 470 Score = 153 bits (386), Expect = 9e-35, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 99/209 (47%), Gaps = 18/209 (8%) Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+++QP++ ++E++ + +Q +LYK ++PLAGC P L+ IPV+ +Y+ +S Sbjct: 119 MRSLQPQVKAIQERYAGD-QERIQLETARLYKLSGVDPLAGCLPTLVTIPVWIGLYRALS 177 Query: 449 ISL-EMRHAPFWGWIKDLAAADPTN-------IFTLF----GILPFYLPGFMHVGIWPII 496 E + WI LA I LF G P + + P++ Sbjct: 178 NVANEGLLTEGFFWIPSLAGPTTIAARQNGQGISWLFPFTDGHPPLGWSDTLAYLVLPVL 237 Query: 497 MSLSMFIQMKMSPPPA-----DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + +S +I ++ PP +G + ++P++ + S P+GL +YW +N++S Sbjct: 238 LVISQYISTQVMQPPQSNDPSQQGAQAVTKFLPLLIGYFALSVPSGLGLYWLTNNILSTA 297 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 QQ + K+ GA+ + + + + + Sbjct: 298 QQVWLQKLGGAKNPVKEYIDVLSREESTT 326 >gi|317130857|ref|YP_004097139.1| membrane protein insertase, YidC/Oxa1 family [Bacillus cellulosilyticus DSM 2522] gi|315475805|gb|ADU32408.1| membrane protein insertase, YidC/Oxa1 family [Bacillus cellulosilyticus DSM 2522] Length = 274 Score = 153 bits (386), Expect = 1e-34, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 34/245 (13%) Query: 337 GWF-YFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMK 390 G+F +++ P L+ +F + GN+G +I+L T+ +++ PL KQY + M Sbjct: 42 GFFNHYVVYPFSYLIKFFAAMFNGNYGASIILMTILLRMALMPLMLKQYKNQIVMKEKMS 101 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 IQP++ ++ E++K Q Q+ ++ +Y+ HN NP+A GC P+++Q+P+ Y Sbjct: 102 VIQPEMQKINEQYKDKKDQESQRKKQQELMAVYQKHNFNPIASMGCLPMIIQLPILMGFY 161 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I + E+ A +L D ILPF V Q Sbjct: 162 WAIMRTPEI--ASHSFLWFNLGETD--------LILPFLAAFVYFVQFKV--------SQ 203 Query: 505 MKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAV---IMKMH 560 + + P P + ++ ++ PV+ A L +YW+ + I Q + I K Sbjct: 204 IGVIPQPGQENMMKMMGFITPVMMGVFSFGMAAALPLYWTIGGLFLIFQTLLSKAIYKKP 263 Query: 561 GAEIG 565 I Sbjct: 264 EPAIA 268 >gi|297592153|gb|ADI46937.1| ALB3_1m [Volvox carteri f. nagariensis] Length = 455 Score = 153 bits (386), Expect = 1e-34, Method: Composition-based stats. Identities = 62/258 (24%), Positives = 123/258 (47%), Gaps = 28/258 (10%) Query: 337 GWFYFIAKPMFMLMSYF------YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GW ++ M ++ F ++ +G +I+L T+ VK+L +PL K+Q S ++ Sbjct: 108 GWVAPLSNAMEQVLYVFRDALDELHVPYAYGYSIILLTLVVKILTYPLVKQQVESALAVQ 167 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++P++D ++++F + ++K LY+ +NPLAGC P L IPVF +Y ++ Sbjct: 168 ALKPRVDLIKDRFGDD-TEKIRKETSVLYEQAGVNPLAGCLPTLATIPVFIGLYTSLTNV 226 Query: 451 L--EMRHAPFWGWIKDLAAA----DPTNIFTLFGILPFYLPGFMHVGI--------WPII 496 + + WI LA + + PF + G +G P++ Sbjct: 227 ANGGLLDTQGFYWIPSLAGPTTLAQRQSGLGTSWLFPF-VDGAPPIGWGAAATYLVLPVL 285 Query: 497 MSLSMFIQMKMSPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 + L ++ ++ PP D Q ++L +P++ + + P+GL +Y+ + V+S Sbjct: 286 LVLVQYVSSYLTNPPIDPNDENASMQRILLLGLPLMIGWFALNVPSGLSLYYLSNTVLSA 345 Query: 551 VQQAVIMKMHGAEIGLID 568 QQ + K+ GA + + + Sbjct: 346 AQQVYLKKLGGARVSINE 363 >gi|163845720|ref|YP_001633764.1| 60 kDa inner membrane insertion protein [Chloroflexus aurantiacus J-10-fl] gi|222523425|ref|YP_002567895.1| 60 kDa inner membrane insertion protein [Chloroflexus sp. Y-400-fl] gi|163667009|gb|ABY33375.1| 60 kDa inner membrane insertion protein [Chloroflexus aurantiacus J-10-fl] gi|222447304|gb|ACM51570.1| 60 kDa inner membrane insertion protein [Chloroflexus sp. Y-400-fl] Length = 314 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 16/232 (6%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W F+ + L+ +F +L GN + I+L T+ +L PL S+ M+ +QP + Sbjct: 4 WSAFVGL-LEQLLLFFSSLTGNMALGIVLFTIAARLFILPLTLSSLRSSRRMQEVQPILK 62 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH-- 455 E++ K+ + P Q LQ+ +++Y+ H INP+ GC P+LLQ+P+FF +Y+ + + Sbjct: 63 EIQRKYGKDP-QRLQEETLRVYREHKINPVGGCLPLLLQLPIFFGVYQAVYHLMVPEQRV 121 Query: 456 -----APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS---MFIQMKM 507 A + LA F + +P + P + I+ LS +Q M Sbjct: 122 NLSAAAAEMLKDERLAQILAAPFFGMDLGVPAFGPNGFAGFAYLILPVLSIVLQLMQQLM 181 Query: 508 -SPPPADKGQAMI---LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 +P D Q + MP VF + +FP G ++YW S+V+ +VQQ Sbjct: 182 ATPRVQDPQQKAFTQAMLIMPFVFGYIAFTFPTGAVLYWVVSSVVGVVQQYF 233 >gi|58337788|ref|YP_194373.1| family protein [Lactobacillus acidophilus NCFM] gi|58255105|gb|AAV43342.1| putative family protein [Lactobacillus acidophilus NCFM] Length = 322 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 107/255 (41%), Gaps = 36/255 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQY----VSTA 387 +GW Y ++ +P+ +M +++G G I++ T V+L+ PL Q Sbjct: 39 YGWVYQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K L +LY + ++ G C P+L+Q+P+ Sbjct: 99 KMARLQPQMKLIQNAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGIGCLPLLIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S E+ H+ F+G + I T+F ++ Y+ Sbjct: 159 WGIYQAVFYSQELAHSTFFGISLSQKSVVLAIIATVFTVIQGYISTIGI----------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P K ++ + P++ +F SF L +YW+ N + I+QQ ++ + Sbjct: 208 --------PEEQKKTMQSMMLFNPIMTLFFSLSFSGALALYWAAGNFVMIIQQLIVTFIL 259 Query: 561 GAEIG--LIDRLRST 573 ++ + D L+ Sbjct: 260 TPKVKQHVADELKEK 274 >gi|289803256|ref|ZP_06533885.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 133 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 57/153 (37%), Positives = 87/153 (56%), Gaps = 21/153 (13%) Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF Sbjct: 1 MRERLGDDK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPF 59 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQA 517 WI DL+A DP I PI+M ++MF KMSP D Q Sbjct: 60 ALWIHDLSAQDPYYIL-------------------PILMGVTMFFIQKMSPTTVTDPMQQ 100 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 I+ +MPV+F FP+GL++Y+ SN+++I Sbjct: 101 KIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTI 133 >gi|227904438|ref|ZP_04022243.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus acidophilus ATCC 4796] gi|227867813|gb|EEJ75234.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus acidophilus ATCC 4796] Length = 322 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 107/255 (41%), Gaps = 36/255 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQY----VSTA 387 +GW Y ++ +P+ +M +++G G I++ T V+L+ PL Q Sbjct: 39 YGWVYQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K L +LY + ++ G C P+L+Q+P+ Sbjct: 99 KMARLQPQMKLIQNAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGIGCLPLLIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S E+ H+ F+G + I T+F ++ Y+ Sbjct: 159 WGIYQAVFYSQELAHSTFFGISLSQKSVVLAIIATVFTVIQGYISTISI----------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P K ++ + P++ +F SF L +YW+ N + I+QQ ++ + Sbjct: 208 --------PEEQKKTMQSMMLFNPIMTLFFSLSFSGALALYWAAGNFVMIIQQLIVTFIL 259 Query: 561 GAEIG--LIDRLRST 573 ++ + D L+ Sbjct: 260 TPKVKQHVADELKEK 274 >gi|223973321|gb|ACN30848.1| unknown [Zea mays] Length = 297 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 22/214 (10%) Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+N+QP++ +++++ + + +Q +LY+ +NPLAGC+P L IPV+ +Y+ +S Sbjct: 3 MQNLQPQLKAIQQRYAGN-QERIQLETARLYRQAGVNPLAGCFPTLATIPVWIGLYQALS 61 Query: 449 ISL-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGIW--------PII 496 E + WI L + + P G +G + P++ Sbjct: 62 NVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWYDTICYLVLPVL 121 Query: 497 MSLSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + S ++ M++ PP D Q ++L ++P + + S P+GL IYW +NV+S Sbjct: 122 LVASQYVSMEIMKPPQSDDPSQKNTLLVLKFLPFMIGYFSLSVPSGLSIYWFTNNVLSTA 181 Query: 552 QQAVIMKMHGAEIGLID----RLRSTFSKNYNSQ 581 QQ + KM GA+ + + + + +K N+Q Sbjct: 182 QQVWLRKMGGAKPVVSEGDRRIITAGRAKRSNAQ 215 >gi|306821796|ref|ZP_07455391.1| stage III sporulation protein J [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550163|gb|EFM38159.1| stage III sporulation protein J [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 260 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 69/235 (29%), Positives = 120/235 (51%), Gaps = 10/235 (4%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I+ ++ +FYN+ N+ ++I+L T+ K++ PL Q S + MK IQP+ID++ + Sbjct: 4 ISYFFGHILEFFYNMTSNYALSIVLFTILTKIILLPLTISQMRSMSAMKLIQPEIDKINK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K Q + + +LYK +NINP AGC P+L+Q+P+ A+Y VI ++ A Sbjct: 64 KYKND-RQKQSELLSKLYKDNNINPAAGCLPLLIQLPILTAMYSVIREPIKYVFANNEAL 122 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-------PPPADK 514 K A + L + + G I P++ ++ ++Q+KMS A Sbjct: 123 YKT-ADIGFFWVKHLTDVDKINVGGMDLPFILPVMSAIFTYLQLKMSTARSSSDNEMAQG 181 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + MP++ + FPAGL++YW ++ I+QQ I K + +I L + Sbjct: 182 MSKNMSVMMPIMMLIWGVMFPAGLMLYWVTGTIVQIIQQYFIGK-YEEKIMLEKK 235 >gi|54027644|ref|YP_121886.1| putative inner membrane protein translocase component YidC [Nocardia farcinica IFM 10152] gi|54019152|dbj|BAD60522.1| putative membrane protein [Nocardia farcinica IFM 10152] Length = 359 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 109/285 (38%), Gaps = 53/285 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ + G + +A++ ++++ + KQ +T M Sbjct: 2 LDFIYWPVSWILWFWHRVFGFAFGADNGLTWALAVVFLVFTLRIVLYKPFVKQVRTTKQM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I EL++K+K Q + M +L K H NPL GC P+L Q+PVF ++ V+ Sbjct: 62 QELQPQIKELQKKYKND-RQKMALEMQKLQKEHGFNPLMGCLPVLAQVPVFLGLFHVLRS 120 Query: 450 SLEMRH---------------APFWGWIKDLAAADPTNIFTL------------------ 476 H A + D+ + IF Sbjct: 121 FNRTGHGFGQLGLTPEQNANTANYVFNAADVQSFLSARIFGAPISAFITTPQAEFLAFED 180 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQ-----MKMSPPPADKGQAMIL-----NWMPVV 526 +G +P L + +I L+ + +P A QA ++ P+ Sbjct: 181 YGGIPSRLSIALVAIPLMVIAGLATHFNARASVARQTPEAAANPQAALMNKLALWVFPLG 240 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 + P +++YW +N+ + QQ ++ E + + Sbjct: 241 VLVGGPFLPIAILLYWVSNNIWTYGQQHLVFGRMAKEEEAKKQAK 285 >gi|253800971|ref|YP_003033973.1| hypothetical protein TBMG_03969 [Mycobacterium tuberculosis KZN 1435] gi|253322475|gb|ACT27078.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435] Length = 366 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 103/274 (37%), Gaps = 48/274 (17%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAK 380 +L D+ FI P+ +M +Y L + +++M ++ L + Sbjct: 1 MSLLFDFFSLDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFV 60 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 +Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 61 RQIRTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVF 119 Query: 441 FAIYKVISISLEMRHAPFWGWIK---------------DLAAADPTNIF----------- 474 +Y V+ + D+ N+F Sbjct: 120 LGLYHVLRSFNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQR 179 Query: 475 -TLFGILPFYLPGFMHVG-IWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NW 522 L + F P + VG I+ ++ + + S A Q ++ Sbjct: 180 SGLDAFVDFSRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYV 239 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P+ V P +++YW +N+ + QQ + Sbjct: 240 FPLGVVVGGPFLPLAIVLYWFSNNIWTFGQQHYV 273 >gi|315611930|ref|ZP_07886848.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis ATCC 49296] gi|315315919|gb|EFU63953.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis ATCC 49296] Length = 277 Score = 152 bits (384), Expect = 2e-34, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 105/249 (42%), Gaps = 29/249 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I Sbjct: 39 FWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQMVASRKMQEAQPRIKA 98 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L + M ++YK I + WPIL+Q+PV A+++ +S ++ Sbjct: 99 LREQYPGRDMESRTQLDQEMRKVYKELGIKHSSSLWPILIQMPVLLALFQALSRVDFLKT 158 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + WI +L D + + PI+ ++ F+ +S + Sbjct: 159 G-HFLWI-NLGGVDTSFVL-------------------PILAAVFTFLSSWLSNKALSEK 197 Query: 516 QAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG--AEIGLIDRL 570 ++ MPV+ S P+G+ +YW+ SN ++Q + AE + + Sbjct: 198 SGATTGMMYGMPVLIFVFAISAPSGVALYWAVSNAYQVLQTYFLNNPFKIIAEREAVAQA 257 Query: 571 RSTFSKNYN 579 Sbjct: 258 EKDLEGKKR 266 >gi|302877173|ref|YP_003845806.1| membrane protein insertase, YidC/Oxa1 family [Clostridium cellulovorans 743B] gi|307687872|ref|ZP_07630318.1| putative inner membrane protein translocase component YidC [Clostridium cellulovorans 743B] gi|302580030|gb|ADL54042.1| membrane protein insertase, YidC/Oxa1 family [Clostridium cellulovorans 743B] Length = 224 Score = 152 bits (384), Expect = 2e-34, Method: Composition-based stats. Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 17/223 (7%) Query: 338 WFYFIAKPMFMLM-SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + I + + L+ S NL + G++I++ ++F K+ FPL KQ S+ M+ IQP++ Sbjct: 8 FLTTIFEWIVNLLDSGINNLNISVGLSIIVFSIFFKICLFPLNIKQIKSSFKMREIQPEV 67 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +L+ K+K P Q L +A +QLYK +P AGC P+LLQ PV A+Y V E+ Sbjct: 68 AKLQAKYKSDP-QKLNQATMQLYKESGASPFAGCLPLLLQWPVLMAMYFVF-KDAEIIKG 125 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + W+ DL+A DP I + + + + A K Sbjct: 126 HSFLWLTDLSARDPRYILPVLTA--------------ATTYISTTYSTKQTQTAEAAKNM 171 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + + + +F + + +++Y+ N+ Q +I K Sbjct: 172 STMTIVTTGMMLFMSLTLNSAVVMYYVIGNIFQFAQTYLIQKF 214 >gi|319946179|ref|ZP_08020419.1| ParB/SpoJ family partitioning protein [Streptococcus australis ATCC 700641] gi|319747561|gb|EFV99814.1| ParB/SpoJ family partitioning protein [Streptococcus australis ATCC 700641] Length = 271 Score = 152 bits (384), Expect = 2e-34, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 89/221 (40%), Gaps = 24/221 (10%) Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTH 422 L T+ ++ + P+ + Q S+ M+ IQP + E++ K+ + + M LYK Sbjct: 60 LFTLLIRTILLPVFQYQMTSSRKMQEIQPLVKEIQAKYPGKDLESRTRMSEEMRALYKEK 119 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 + + P+ +Q+PV A+++ +S ++ D++A DPT I + + Sbjct: 120 GVKTSSAFLPLFIQMPVLMALFQALSRVEFLKVG--HFLWLDMSATDPTFILPVLAAVFT 177 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 + ++ + P + G ++ MPV+ F +G+ +YW Sbjct: 178 FFSTWL----------------SNKAMPEKNGGMTAMMYAMPVMIFFFAMYSASGVALYW 221 Query: 543 SWSNVISIVQQAVIM---KMHGAEIGLIDRLRSTFSKNYNS 580 SN + Q ++ K+ A ++ + + Sbjct: 222 VVSNAYQVGQTYLLNNPFKIIAAREAEQQAIKDIEKQKRRA 262 >gi|226362891|ref|YP_002780671.1| inner membrane protein translocase component YidC [Rhodococcus opacus B4] gi|226241378|dbj|BAH51726.1| putative OxaA family protein [Rhodococcus opacus B4] Length = 367 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 103/285 (36%), Gaps = 55/285 (19%) Query: 339 FYFIAKPMFMLMSYFYNLVG-----------NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 FI P+ ++ ++ + G + ++++ ++ + + KQ +T Sbjct: 2 LDFIYYPVSGILWVWHKVFGAIPFLGPDSGITWALSVVFLVFTLRAVLYKPFVKQVRTTR 61 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ +QP+I L++K+ Q M +L K H NP+ GC P+L Q PVF ++ V+ Sbjct: 62 QMQELQPQIKALQKKYSGD-RQRQAVEMQKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVL 120 Query: 448 S------------------------ISLEMRHAPFWGWIKDLAAADPTNI---------F 474 + + + A I F Sbjct: 121 RSFNRTGTGIGQLGMSVEANANTPNYFFSVEDVQSFLSARLFGAPISAWITMPKAQLDAF 180 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMP 524 +G +P L + II S++ + SP A Q+ I+ P Sbjct: 181 AAYGPIPTVLNIAVVAVPLMIIASIATHFNSRASVARQSPEAAANPQSAIMNKLALWVFP 240 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + + P +++YW +N+ + QQ ++ + AE + Sbjct: 241 LGVLVGGPFLPIAILLYWVSNNIWTYGQQHIVFRRIDAEEEEKKQ 285 >gi|112830|sp|P22833|OXAA_PROMI RecName: Full=Inner membrane protein oxaA gi|150874|gb|AAA83954.1| ORF1; putative [Proteus mirabilis] Length = 237 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 82/244 (33%), Gaps = 20/244 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + + Q P+ + + Sbjct: 1 MDSQRNL-LFIALLFVSFLIWQQWEGDKVSQNTTTTTQVSQQADMPSSDSLAVTGNSNE- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + +K L IN +G D+ +L Y +++S +P L + + Y Sbjct: 59 ------QAKLITVKTDVLDLRINTQGGTIDEADLLAYPAELNSKTPFRLL--ETTPQFLY 110 Query: 121 FAELDYVSTANNIELP---NSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 A+ + + S T I G+ + + F N + F +T L + Sbjct: 111 QAQSGLIGPDGPDQKSRPVYSATQQEFILGEN-QDELRVPMTFVNEEGVKFVKTFILKKG 169 Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFIAVLGDKSLVE 231 Y I V N + + + G++ + T ++ F + A Sbjct: 170 QYDIGIEYKVENPTDKTLTMNFYGQLKQSVKLPEHRDTGSSNFALHTYRGAAYSSDETNY 229 Query: 232 QKYS 235 +KYS Sbjct: 230 KKYS 233 >gi|10122033|gb|AAG13422.1|AC051634_3 putative Oxa1 protein [Oryza sativa Japonica Group] Length = 487 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 93/226 (41%), Gaps = 20/226 (8%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +F + ++ Y + G N+ I L TV ++ PL Q +T + I+P+++ Sbjct: 122 FFPVAALQHVIDYIHTFTGLNWWACIALATVLIRSATVPLLVNQLKATQKLNAIRPEMEA 181 Query: 399 LREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--- 452 ++E+ P+ ++ M L++ H ++P +L+Q P+F + + I ++ Sbjct: 182 IKEEMNAMDPKSAKEGKAKMTALFQKHGVSPFTPLKGLLIQGPIFMSFFFAIRNMIDKVP 241 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 W DL DP I + L F ++++ + +Q M P Sbjct: 242 SMKGGGSLWFTDLTTPDPLYILPVLTALIF-------------LVTVELNLQEGMEGNPM 288 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + M V+ V SF G+ YW SN+ ++ VI + Sbjct: 289 ARKMKNFSRGMAVLTVPFTMSFAKGIFCYWITSNLFTLTYGFVIRR 334 >gi|163790185|ref|ZP_02184618.1| integral membrane protein [Carnobacterium sp. AT7] gi|159874460|gb|EDP68531.1| integral membrane protein [Carnobacterium sp. AT7] Length = 307 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 113/255 (44%), Gaps = 36/255 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + F+ P ++ + G ++G++I+ T+ V+L+ PL Q M I Sbjct: 36 IYQFLVVPTQQVIIQLADFFGGSYGLSIIAITLAVRLIIMPLNLSQSKKSIIQQEKMALI 95 Query: 393 QPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P++DE+++K K + Q+ ++ LYK +N++ L G C P+L+Q+PVF A+++ Sbjct: 96 KPEMDEVQKKQKAAVTAEEKAAAQQELMSLYKDNNMSMLGGIGCLPLLIQMPVFTAMFQA 155 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 I++S E+ ++ F G + + + ++ + ++ M Sbjct: 156 INLSTEISNSTFLG----FSLGNQNIALAIAAGAVYF---------------VQSYVSMI 196 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 P K ++ P++ + + PAGL +YW + ++ Q + + Sbjct: 197 GLPDEQKKQMRTMMYVSPIMILMVSFTSPAGLGLYWFVGGIFAVFQTIITNFIFKP---- 252 Query: 567 IDRLRSTFSKNYNSQ 581 R+++ + ++ Sbjct: 253 --RIKAQLEEEARNR 265 >gi|118466815|ref|YP_884420.1| inner membrane protein translocase component YidC [Mycobacterium avium 104] gi|118168102|gb|ABK68999.1| membrane protein OxaA [Mycobacterium avium 104] Length = 350 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 105/286 (36%), Gaps = 52/286 (18%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQY 383 + D+ F+ P+ +M +Y L + +++M ++ L + +Q Sbjct: 1 MFDFFSLDFVYYPVSWIMWVWYKLFAAMLGPSNFFAWALSVMFLVFTLRALLYKPFVRQI 60 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF + Sbjct: 61 RTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGL 119 Query: 444 YKVISIS-----------------------------------LEMRHAPFWGWIKDLAAA 468 Y V+ + AP ++ Sbjct: 120 YHVLRSFNRTTGGFGQPHLSVVQNRLTGNYVFTPTDVGHFLDANLFGAPIGAFMTQRTGL 179 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-----NWM 523 D F+ ++ LP + G+ S + + SP A Q ++ Sbjct: 180 DAFTYFSRPAVIAVGLPVMILAGVATYFNSRASVA--RQSPEAAANPQTAMMNKLALYVF 237 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P+ V P +I+YW +N+ + QQ + M E + Sbjct: 238 PLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQ 283 >gi|319946450|ref|ZP_08020687.1| SpoIIIJ family protein [Streptococcus australis ATCC 700641] gi|319747418|gb|EFV99674.1| SpoIIIJ family protein [Streptococcus australis ATCC 700641] Length = 312 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 103/256 (40%), Gaps = 36/256 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ + I KPM +++F +G FG+ I+L TV V+++ FPL Q + M Sbjct: 35 GFIWNLIGKPMGEAINFFATDLGLGFGLGIILVTVIVRVIIFPLGIYQSWKATYQSEKMN 94 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++P ++E+ K + Q ++ K + ++P G C P+L+Q+P F A+Y Sbjct: 95 YLKPIFAPIQERIKNAETQEEKLLANSELMNAQKENGVSPFGGIGCLPLLIQMPFFSALY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + F G + + TL + +Y+ + + Sbjct: 155 FAAQYTPGISKDSFLG----IGLGSKSLALTLVVAVLYYIQSMLSLHG------------ 198 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + + P++ PAG+ +YW + I+QQ VI + Sbjct: 199 --IEDENQRETMKKTALVSPIMIAVFSLMAPAGVTLYWVVGGFVQIIQQFVINYL----- 251 Query: 565 GLIDRLRSTFSKNYNS 580 + RLR ++ Y + Sbjct: 252 -IRPRLRKQVAEEYKN 266 >gi|319940011|ref|ZP_08014365.1| membrane protein oxaA 1 [Streptococcus anginosus 1_2_62CV] gi|319810725|gb|EFW07052.1| membrane protein oxaA 1 [Streptococcus anginosus 1_2_62CV] Length = 271 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 21/221 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + F + F + G+ GI I+L T+ ++ + P+ + Q ++ M+ QP + E Sbjct: 33 LWERFVYFFAVTIRFLSFNGSTGIGIILFTLIIRTVLLPVFQLQINASRKMQEAQPLVKE 92 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 L+ K+ + L + +LYK + P A WP+L+Q+PV A+Y ++ ++ Sbjct: 93 LQAKYPGRDMESRSRLAEETQKLYKELGVKPSASFWPLLIQMPVLIALYHALTRVEFLKV 152 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 +L A DP I + + +L ++ L Sbjct: 153 G--HFLWLNLGATDPYYILPVLAAVFTFLSTWLSNKGMAERNGL---------------- 194 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ MP+ F S +G+ +YWS S + Q ++ Sbjct: 195 MTGMMFVMPLFVFFFAMSVASGVALYWSTSYAYQVFQTLLL 235 >gi|126651503|ref|ZP_01723707.1| hypothetical protein BB14905_07464 [Bacillus sp. B14905] gi|126591756|gb|EAZ85852.1| hypothetical protein BB14905_07464 [Bacillus sp. B14905] Length = 252 Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 31/241 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NM 389 G+FY KPM L+ +F N G++G+AI+ TV ++L+ P+ K Y M Sbjct: 28 GFFYSIFVKPMEFLLEFFGNNIFAGSYGLAIIAITVLIRLVLMPIMLKNYRQQQLMKTKM 87 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIY 444 +P+++ +++K K++ + Q+ M+ LY+ H INPL GC P+L+Q+P+ +Y Sbjct: 88 DAFKPEMEAVQKKMKEAKTKEEQTQYQQEMMALYQKHGINPLNMGCLPMLIQMPIIMGLY 147 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S +++ F + P + T+ + + + + + P Sbjct: 148 FSILYSTDVKSHEFLW----FSLGSPDIVMTIVAGIVYLVQARVSLWTVP---------- 193 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M + P++ VF S A L +YWS S + I+Q + K + Sbjct: 194 -----EQQKAQMKMFIYISPIMIVFISMSSMAALPLYWSVSGALLILQTYIGRKYYSQHP 248 Query: 565 G 565 Sbjct: 249 E 249 >gi|315222384|ref|ZP_07864289.1| putative stage III sporulation protein J [Streptococcus anginosus F0211] gi|315188545|gb|EFU22255.1| putative stage III sporulation protein J [Streptococcus anginosus F0211] Length = 271 Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 21/221 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + F + F + G+ GI I+L T+ ++ + P+ + Q ++ M+ QP + E Sbjct: 33 LWERFVYFFAVTIRFLSFNGSTGIGIILFTLIIRTVLLPVFQLQINASRKMQEAQPLVKE 92 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 L+ K+ + L + +LYK + P A WP+L+Q+PV A+Y ++ ++ Sbjct: 93 LQAKYPGRDMESRSRLAEETQKLYKELGVKPSASFWPLLIQMPVLIALYHALTRVEFLKV 152 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 +L A DP I + + +L ++ L Sbjct: 153 G--HFLWLNLGATDPYYILPVLAAVFTFLSTWLSNKGMAERNGL---------------- 194 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ MP+ F S +G+ +YWS S + Q ++ Sbjct: 195 MTGMMFVMPLFVFFFAMSVASGVALYWSTSYAYQVFQTLLL 235 >gi|304404107|ref|ZP_07385769.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus curdlanolyticus YK9] gi|304347085|gb|EFM12917.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus curdlanolyticus YK9] Length = 280 Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 33/241 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMKNI 392 + ++I P ++ + G++G++I++ T+ V+L+ PL +Q A MK + Sbjct: 46 FNHYIVYPFSAVIQHVATWFDGSYGLSIIVITLLVRLILMPLMIRQQTGQLAMRAKMKTL 105 Query: 393 QPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVI 447 P+++ ++EK+K + LQ+ +QLY+ H +NPLA GC P+L+Q+P+ +Y I Sbjct: 106 TPELNAVKEKYKSKKDAESQRKLQQETMQLYQQHGVNPLAIGCLPLLIQLPILTGLYYAI 165 Query: 448 SISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 ++ E++ HA W L +ADP I+PF G + F+ + Sbjct: 166 RMTPELKTHAFLWFK---LGSADP--------IMPFIAAGVYLI---------QSFVSQR 205 Query: 507 MSPP--PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +S K AM++ P++ + PA L +YW+ V I Q + +++ Sbjct: 206 LSGSDASQQKQMAMLMYLSPIMMGLFSFTAPAALPLYWAVGGVFMIGQSWLAYRLYHRRT 265 Query: 565 G 565 G Sbjct: 266 G 266 >gi|118620076|ref|YP_908408.1| putative inner membrane protein translocase component YidC [Mycobacterium ulcerans Agy99] gi|118572186|gb|ABL06937.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99] Length = 371 Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 104/274 (37%), Gaps = 48/274 (17%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQY 383 L D+ F+ P+ +M +Y L + +++M ++ L + +Q Sbjct: 4 LFDFFSLEFVYYPVSWIMWVWYKLFALVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQI 63 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF + Sbjct: 64 RTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGL 122 Query: 444 YKVISISLEMRHAP---------------FWGWIKDLAAADPTNIF------------TL 476 Y V+ + D+ N+F L Sbjct: 123 YHVLRSFNRTTGGFGQPHLSVVENRLTGNYVFTPTDVGHFLDVNLFGAPIGASMTQRGGL 182 Query: 477 FGILPFYLPGFMHVG-IWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMPV 525 + F P + VG ++ ++ + + SP A Q ++ P+ Sbjct: 183 DAFVDFSRPAVIAVGVPVMVLAGVATYFNSRASVARQSPEAAANPQTAMMNKLALYVFPL 242 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 V P +I+YW +N+ + QQ + M Sbjct: 243 GVVVGGPFLPLAIILYWFSNNIWTFGQQHYVFSM 276 >gi|306826338|ref|ZP_07459671.1| ParB/SpoJ family partitioning protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431451|gb|EFM34434.1| ParB/SpoJ family partitioning protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 277 Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 101/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I Sbjct: 39 FWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQMVASRKMQEAQPRIKA 98 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L + M ++YK I + WPIL+Q+PV A+++ +S ++ Sbjct: 99 LREQYPGRDMESRTKLDQEMRKVYKELGIKHSSSLWPILIQMPVLLALFQALSRVDFLKT 158 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + WI +L D + + PI+ ++ F+ +S + Sbjct: 159 G-HFLWI-NLGGVDTSFVL-------------------PILAAVFTFLSSWLSNKALSEK 197 Query: 516 QAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ MP++ S P+G+ +YW+ SN ++Q + Sbjct: 198 SGATTGMMYGMPILIFVFAISAPSGVALYWAVSNAYQVLQTYFLN 242 >gi|268610508|ref|ZP_06144235.1| 60 kDa inner membrane insertion protein [Ruminococcus flavefaciens FD-1] Length = 371 Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats. Identities = 68/305 (22%), Positives = 123/305 (40%), Gaps = 61/305 (20%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G + I P LM Y + N+ ++I++ T+ +LL FP++ S+A M+ + PK+ Sbjct: 3 GLYDIIGVPFGYLMRLIYAIFKNYAVSIIVFTIVTRLLMFPVSYSTQKSSARMQLLNPKL 62 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEM 453 ++LR+ F +P Q LQ+ +LY+ +NP+A C P +Q+ + F + V+ + Sbjct: 63 EKLRKSFANNP-QRLQEEQQKLYQEEGVNPMASCLPTFIQMFLLFGVLDVVYKPLTHILD 121 Query: 454 RHAPFWGWIKDLAAADPT------------------------------------NIFTLF 477 ++A DP+ FT+F Sbjct: 122 MGKSVINSALEIAGVDPSKTGLRGELKIMESLAADKGKFASLGSDFVNKVYEFNQKFTIF 181 Query: 478 GILPFYLPGFMH---------VGIWPIIMSLSMFI--------QMKMSPPPADKG---QA 517 G P + P + L+ + Q K++P G Sbjct: 182 GANLGKTPTLHPETWNKEAVILAAIPFLAGLAQLLYSFYTQMHQKKVNPSMQQAGGGCMN 241 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-IGLIDRLRSTFSK 576 ++L MP+ ++ +FPAGL YW WS++IS + + + E I +I+ +K Sbjct: 242 VMLYGMPIFSIWMAFTFPAGLGFYWIWSSLISFIITFALNQYFTPERIKVINEKEKEKAK 301 Query: 577 NYNSQ 581 Y + Sbjct: 302 AYAEK 306 >gi|319938685|ref|ZP_08013049.1| membrane protein oxaA 2 [Streptococcus anginosus 1_2_62CV] gi|319811735|gb|EFW08001.1| membrane protein oxaA 2 [Streptococcus anginosus 1_2_62CV] Length = 305 Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats. Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 33/254 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ + I +PM + + YF N +G FG+AI++ T+ V+L+ PL Q + M Sbjct: 33 GFVWDIIGRPMSLAIQYFANNMGLGFGVAIIIVTLIVRLIILPLGLYQSWKATYQSEKMN 92 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPLAG--CWPILLQIPVFFAIY 444 ++P + ++E+ K + Q + A Q K + +N L G C P+L+Q+P F A+Y Sbjct: 93 YLKPIFEPIQERMKNAETQEEKLAAQQALMAAQKENGVNMLGGIGCLPLLIQLPFFSALY 152 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + + F G A+ + + GIL F VG+ + Sbjct: 153 FSAQYTEGVAKSVFLGIPLGKAS---ILLTIIVGILYFIQSALTLVGVDEV--------- 200 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + ++ P++ V + PAG+ +YW I I+QQ +I H Sbjct: 201 -------QKEQMKKMMYMSPLMIVIFSFTAPAGVTLYWVVGGFIMIIQQLIIN--HYIRP 251 Query: 565 GLIDRLRSTFSKNY 578 L R+ + N Sbjct: 252 QLRKRVAEEYKNNP 265 >gi|295425290|ref|ZP_06817993.1| membrane protein chaperone OxaA [Lactobacillus amylolyticus DSM 11664] gi|295065066|gb|EFG55971.1| membrane protein chaperone OxaA [Lactobacillus amylolyticus DSM 11664] Length = 321 Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats. Identities = 57/237 (24%), Positives = 104/237 (43%), Gaps = 34/237 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYV----STA 387 +GW Y +I P+ +M N + G AI++ T+ V+ + PL Q Sbjct: 41 YGWVYTWIGIPLQNVMLKTANAIKGANGAGWAIVIITLVVRTILLPLMLVQQKKSVTQQE 100 Query: 388 NMKNIQPKIDELREKFKQSP---PQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++E K P Q +Q K +LY+ +N++ G C P+L+Q+P+ Sbjct: 101 KMARLQPQMKLIQEGMKHKPMTPEQQMQLSKWQRELYQKNNVSLTGGIGCLPLLIQMPIM 160 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY ++ S +R A F+G + + I T+F ++ Y+ Sbjct: 161 MGIYSAVAYSSVLREASFFGISLNSKSLVLAIIATVFAVIQGYISLIGI----------- 209 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P K ++ P++ +F SF L +YW+ N ++I+QQ ++ Sbjct: 210 --------PKEQKKTMQSMMFMNPIMTLFFSLSFSGALALYWAAGNFVTIIQQILVT 258 >gi|313890878|ref|ZP_07824502.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus pseudoporcinus SPIN 20026] gi|313120776|gb|EFR43891.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus pseudoporcinus SPIN 20026] Length = 309 Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 32/251 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNIQ 393 + + KPM + YF N +G FG+AI++ T+ V+ + PL Q + M ++ Sbjct: 38 WDVLGKPMSHFIEYFANHMGLGFGLAIIIVTIIVRTIILPLGLYQAKKASYQSEKMAYLK 97 Query: 394 PKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P + + ++ K + Q Q ++ K + IN L G C P+L+Q+P F A+Y Sbjct: 98 PVFEPINQRMKNATSQEEKFAAQSELMAAQKENGINMLGGMGCLPLLIQMPFFSAMYFAA 157 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + + + F G DL + + I I+ ++ M+ Sbjct: 158 LHTKGISTSHFLGI--DLGSK-----------------SLILTAIIAILYFFQSWLSMQA 198 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 ++ MP++ +F + PAG+ +YW SI+QQ + + + L Sbjct: 199 VAEEQRAQMKTMMYTMPIMMIFMTMTLPAGVGLYWLVGGFFSIIQQLITT--YFIKPKLR 256 Query: 568 DRLRSTFSKNY 578 ++ F N Sbjct: 257 QQIEEEFKNNP 267 >gi|125974852|ref|YP_001038762.1| protein translocase subunit yidC [Clostridium thermocellum ATCC 27405] gi|256003891|ref|ZP_05428878.1| 60 kDa inner membrane insertion protein [Clostridium thermocellum DSM 2360] gi|281418693|ref|ZP_06249712.1| membrane protein insertase, YidC/Oxa1 family [Clostridium thermocellum JW20] gi|125715077|gb|ABN53569.1| protein translocase subunit yidC [Clostridium thermocellum ATCC 27405] gi|255992229|gb|EEU02324.1| 60 kDa inner membrane insertion protein [Clostridium thermocellum DSM 2360] gi|281407777|gb|EFB38036.1| membrane protein insertase, YidC/Oxa1 family [Clostridium thermocellum JW20] gi|316941974|gb|ADU76008.1| membrane protein insertase, YidC/Oxa1 family [Clostridium thermocellum DSM 1313] Length = 291 Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 117/287 (40%), Gaps = 62/287 (21%) Query: 340 YFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 I++ + ++ + Y + G++G+AI+L TVF+KLL PL+ KQY S+ M+ +QP I Sbjct: 2 GIISQLLGQILVFIYENLSFGSYGLAIILFTVFIKLLLLPLSIKQYKSSLKMQEMQPLIQ 61 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL------ 451 E++ K+K P Q + ++ LYK HN +P +GC +Q+P+ ++Y VI L Sbjct: 62 EIQRKYKNDP-QKQSEELMNLYKEHNFSPASGCLTSFIQLPIIVSLYYVIREPLTYMFNM 120 Query: 452 --------------------EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL------- 484 ++ + I+ + ++ G + F L Sbjct: 121 TKDQIEALVNQLNQAANGLPQINTRSIYFQIEAALRSGKLDVVEELGFIKFDLGKIPKLN 180 Query: 485 -----PGFMHVGIWPIIMSLSMFIQMKMSPP---------------------PADKGQAM 518 ++ + + P++ ++ + KM Sbjct: 181 FTEDVATYLPLLLIPVLAIVATYFSSKMMMKRTQSLRSSTNSKKSKNQSQDDMTAAMNKS 240 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 ++ PV+ PA L +YW SNV I+Q+ +I K + Sbjct: 241 MMWIAPVMTGIISFQAPAALGLYWLTSNVFQIIQEFIINKFIMKKKE 287 >gi|297585523|ref|YP_003701303.1| YidC/Oxa1 family membrane protein insertase [Bacillus selenitireducens MLS10] gi|297143980|gb|ADI00738.1| membrane protein insertase, YidC/Oxa1 family [Bacillus selenitireducens MLS10] Length = 286 Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 40/257 (15%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMK 390 G+F +++ P L+++F +L G ++G +I++ TV ++ PL KQ + M Sbjct: 47 GFFNHYVIYPFSYLLTFFADLFGGSYGASIIMMTVLIRTGLMPLMLKQQRTQLGTKKKMI 106 Query: 391 NIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 IQP+++ L+ K+K Q +Q+ M+ +Y H NPL GC P+L+Q+P+ Y Sbjct: 107 EIQPELEALKAKYKDKKEPEAQQEMQQEMMGIYTKHQFNPLTSMGCLPMLIQLPILIGFY 166 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + I + E+ A L D PI+ +L FIQ Sbjct: 167 QAIMRTEEI--ASQQFLWFSLGETDLI---------------------LPILAALVYFIQ 203 Query: 505 MKMSPPPADKGQAMIL----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++S ++ Q + PV+ A L +YW+ + I Q V K Sbjct: 204 FRISLFGMEETQKKQMAVFGYLTPVMMGGFSFMVSAALPLYWTIGGLFLIAQTLV-FKWM 262 Query: 561 GAEIGLIDRLRSTFSKN 577 E R R+ K Sbjct: 263 FREKNRELRERALMKKE 279 >gi|332523606|ref|ZP_08399858.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus porcinus str. Jelinkova 176] gi|332314870|gb|EGJ27855.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus porcinus str. Jelinkova 176] Length = 297 Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + + KPM + YF N +G FG+AI++ T+ V+ + PL Q + M + Sbjct: 25 IWDILGKPMSHFIEYFANHMGLGFGLAIIIVTIIVRTIILPLGLYQAKKASYQSEKMAYL 84 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P D + ++ K + Q Q ++ K + IN L G C P+L+Q+P F A+Y Sbjct: 85 KPVFDPINQRVKNATTQEEKFAAQSELMAAQKENGINMLGGMGCLPLLIQMPFFSAMYFA 144 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G DL + + I ++ ++ M+ Sbjct: 145 ALHTKGISTSHFLGI--DLGSK-----------------SLILTAIIAVLYFFQSWLSMQ 185 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 ++ MP++ +F + PAG+ +YW SI+QQ + + + L Sbjct: 186 AVAEEQRAQMKTMMYTMPIMMIFMTMTLPAGVGLYWLVGGFFSIIQQLITT--YFIKPKL 243 Query: 567 IDRLRSTFSKNY 578 ++ F N Sbjct: 244 RQQIEEEFKNNP 255 >gi|313660934|ref|ZP_07817814.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis KZN V2475] Length = 363 Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 102/271 (37%), Gaps = 48/271 (17%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQY 383 + D+ FI P+ +M +Y L + +++M ++ L + +Q Sbjct: 1 MFDFFSLDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQI 60 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF + Sbjct: 61 RTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGL 119 Query: 444 YKVISISLEMRHAPFWGWIK---------------DLAAADPTNIF------------TL 476 Y V+ + D+ N+F L Sbjct: 120 YHVLRSFNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGL 179 Query: 477 FGILPFYLPGFMHVG-IWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMPV 525 + F P + VG I+ ++ + + S A Q ++ P+ Sbjct: 180 DAFVDFSRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFPL 239 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V P +++YW +N+ + QQ + Sbjct: 240 GVVVGGPFLPLAIVLYWFSNNIWTFGQQHYV 270 >gi|15611057|ref|NP_218438.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis H37Rv] gi|15843555|ref|NP_338592.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis CDC1551] gi|31795094|ref|NP_857587.1| putative inner membrane protein translocase component YidC [Mycobacterium bovis AF2122/97] gi|148663788|ref|YP_001285311.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis H37Ra] gi|148825129|ref|YP_001289883.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis F11] gi|167969459|ref|ZP_02551736.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis H37Ra] gi|215405979|ref|ZP_03418160.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis 02_1987] gi|215413849|ref|ZP_03422514.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis 94_M4241A] gi|215425183|ref|ZP_03423102.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis T92] gi|215432902|ref|ZP_03430821.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis EAS054] gi|215448268|ref|ZP_03435020.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis T85] gi|219555768|ref|ZP_03534844.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis T17] gi|254233403|ref|ZP_04926729.1| hypothetical protein TBCG_03848 [Mycobacterium tuberculosis C] gi|254366457|ref|ZP_04982501.1| conserved transmembrane protein [Mycobacterium tuberculosis str. Haarlem] gi|254548925|ref|ZP_05139372.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260184850|ref|ZP_05762324.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis CPHL_A] gi|260198981|ref|ZP_05766472.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis T46] gi|260203134|ref|ZP_05770625.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis K85] gi|289441364|ref|ZP_06431108.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289445522|ref|ZP_06435266.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289556189|ref|ZP_06445399.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289567878|ref|ZP_06448105.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289572573|ref|ZP_06452800.1| membrane protein oxaA [Mycobacterium tuberculosis K85] gi|289747765|ref|ZP_06507143.1| conserved transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289748459|ref|ZP_06507837.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289756056|ref|ZP_06515434.1| membrane protein oxaA [Mycobacterium tuberculosis EAS054] gi|289760094|ref|ZP_06519472.1| membrane protein oxaA [Mycobacterium tuberculosis T85] gi|289764112|ref|ZP_06523490.1| conserved transmembrane protein [Mycobacterium tuberculosis GM 1503] gi|294995603|ref|ZP_06801294.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis 210] gi|297733603|ref|ZP_06962721.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis KZN R506] gi|298527393|ref|ZP_07014802.1| membrane protein oxaA [Mycobacterium tuberculosis 94_M4241A] gi|306778285|ref|ZP_07416622.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|306778815|ref|ZP_07417152.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|306786842|ref|ZP_07425164.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|306795591|ref|ZP_07433893.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|306801566|ref|ZP_07438234.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|306970172|ref|ZP_07482833.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|306974404|ref|ZP_07487065.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|307082112|ref|ZP_07491282.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|307086723|ref|ZP_07495836.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|308375034|ref|ZP_07667929.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|54038804|sp|P65627|OXAA_MYCBO RecName: Full=Membrane protein oxaA gi|54041693|sp|P65626|OXAA_MYCTU RecName: Full=Membrane protein oxaA gi|2808706|emb|CAA16234.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13883933|gb|AAK48406.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31620692|emb|CAD96138.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] gi|124603196|gb|EAY61471.1| hypothetical protein TBCG_03848 [Mycobacterium tuberculosis C] gi|134151969|gb|EBA44014.1| conserved transmembrane protein [Mycobacterium tuberculosis str. Haarlem] gi|148507940|gb|ABQ75749.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis H37Ra] gi|148723656|gb|ABR08281.1| conserved transmembrane protein [Mycobacterium tuberculosis F11] gi|289414283|gb|EFD11523.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289418480|gb|EFD15681.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289440821|gb|EFD23314.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289537004|gb|EFD41582.1| membrane protein oxaA [Mycobacterium tuberculosis K85] gi|289541631|gb|EFD45280.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289688293|gb|EFD55781.1| conserved transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289689046|gb|EFD56475.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289696643|gb|EFD64072.1| membrane protein oxaA [Mycobacterium tuberculosis EAS054] gi|289711618|gb|EFD75634.1| conserved transmembrane protein [Mycobacterium tuberculosis GM 1503] gi|289715658|gb|EFD79670.1| membrane protein oxaA [Mycobacterium tuberculosis T85] gi|298497187|gb|EFI32481.1| membrane protein oxaA [Mycobacterium tuberculosis 94_M4241A] gi|308213435|gb|EFO72834.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|308328152|gb|EFP17003.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308328614|gb|EFP17465.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|308343887|gb|EFP32738.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|308347671|gb|EFP36522.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|308351589|gb|EFP40440.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|308352296|gb|EFP41147.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|308356299|gb|EFP45150.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|308360186|gb|EFP49037.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|308363873|gb|EFP52724.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|323717337|gb|EGB26542.1| membrane protein [Mycobacterium tuberculosis CDC1551A] gi|326905754|gb|EGE52687.1| conserved membrane protein [Mycobacterium tuberculosis W-148] gi|328460699|gb|AEB06122.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207] Length = 366 Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 103/274 (37%), Gaps = 48/274 (17%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAK 380 +L D+ FI P+ +M +Y L + +++M ++ L + Sbjct: 1 MSLLFDFFSLDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFV 60 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 +Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 61 RQIRTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVF 119 Query: 441 FAIYKVISISLEMRHAPFWGWIK---------------DLAAADPTNIF----------- 474 +Y V+ + D+ N+F Sbjct: 120 LGLYHVLRSFNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQR 179 Query: 475 -TLFGILPFYLPGFMHVG-IWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NW 522 L + F P + VG I+ ++ + + S A Q ++ Sbjct: 180 SGLDAFVDFSRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYV 239 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P+ V P +I+YW +N+ + QQ + Sbjct: 240 FPLGVVVGGPFLPLAIILYWFSNNIWTFGQQHYV 273 >gi|121635907|ref|YP_976130.1| putative inner membrane protein translocase component YidC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121639832|ref|YP_980056.1| putative inner membrane protein translocase component YidC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224992327|ref|YP_002647017.1| putative inner membrane protein translocase component YidC [Mycobacterium bovis BCG str. Tokyo 172] gi|121491554|emb|CAL70011.1| Probable conserved transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121495480|emb|CAL73969.1| Probable conserved transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224775443|dbj|BAH28249.1| putative inner membrane protein translocase component YidC [Mycobacterium bovis BCG str. Tokyo 172] Length = 366 Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 103/276 (37%), Gaps = 52/276 (18%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAK 380 +L D+ FI P+ +M +Y L + +++M ++ L + Sbjct: 1 MSLLFDFFSLDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFV 60 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 +Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 61 RQIRTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVF 119 Query: 441 FAIYKVISIS-----------------------------------LEMRHAPFWGWIKDL 465 +Y V+ + AP ++ Sbjct: 120 LGLYHVLRSFNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQR 179 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL----- 520 + D F+ ++ +P + GI S + + S A Q ++ Sbjct: 180 SGLDVFVDFSRPALIAVGVPVMILAGIATYFNSRASIA--RQSAEAAANPQTAMMNKLAL 237 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P+ V P +I+YW +N+ + QQ + Sbjct: 238 YVFPLGVVVGGPFLPLAIILYWFSNNIWTFGQQHYV 273 >gi|292559000|gb|ADE32001.1| putative inner membrane protein [Streptococcus suis GZ1] Length = 304 Score = 150 bits (380), Expect = 4e-34, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 35/255 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 GW Y F+ PM L+ +F G FG+AI++ T+ V+L PL Q + M Sbjct: 35 GWVYNFLVAPMGNLIKFFAENQGLGFGVAIIIVTLIVRLFIMPLGIYQSWKSTYQSEKMN 94 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPLAG--CWPILLQIPVFFAIY 444 ++P + ++E+ K + Q Q A Q Y K + ++ G C PIL+Q+P F A++ Sbjct: 95 YLKPILGPIQERMKNASSQEEQLAAQQEYFAAQKQYGVSVFGGMGCLPILIQMPFFTALF 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A F G DL +A + I T + +Y + Sbjct: 155 YAARYTEGISEATFLGI--DLGSA--SLILTAIAGILYYAQSLL---------------- 194 Query: 505 MKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M++ K Q + M P++ V S PAG+ +YW I +VQQA+ + + Sbjct: 195 MQVGMDEEQKKQMKAVAIMNPLMIVMFSWSSPAGVTLYWVVGGFIGLVQQALTNFIL--K 252 Query: 564 IGLIDRLRSTFSKNY 578 + ++ F N Sbjct: 253 PRIRAKVEEEFKNNP 267 >gi|169829751|ref|YP_001699909.1| membrane protein oxaA [Lysinibacillus sphaericus C3-41] gi|168994239|gb|ACA41779.1| Membrane protein oxaA precursor [Lysinibacillus sphaericus C3-41] Length = 252 Score = 150 bits (380), Expect = 4e-34, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 31/241 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NM 389 G FY KPM L+ +F N G++G+AI+ TV ++L+ P+ K Y M Sbjct: 28 GIFYSIFVKPMEFLLEFFGNDIFAGSYGLAIIAITVLIRLVLMPIMLKNYRQQQLMKTKM 87 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIY 444 +P+++ +++K K++ + Q+ M+ LY+ H INPL GC P+L+Q+P+ +Y Sbjct: 88 DAFKPEMEAVQKKMKEAKTKEEQTQYQQEMMALYQKHGINPLNMGCLPMLIQMPIIMGLY 147 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S +++ F + P + T+ + + + + + P Sbjct: 148 FSILYSTDVKSHEFLW----FSLGSPDIVMTIVAGVVYLVQARVSLWTVP---------- 193 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M + P++ VF S A L +YWS S + I+Q + K + Sbjct: 194 -----EQQKAQMKMFIYISPIMIVFISMSSMAALPLYWSVSGALLILQTYIGRKYYSQHP 248 Query: 565 G 565 Sbjct: 249 E 249 >gi|256381073|ref|YP_003104733.1| 60 kDa inner membrane insertion protein [Actinosynnema mirum DSM 43827] gi|255925376|gb|ACU40887.1| 60 kDa inner membrane insertion protein [Actinosynnema mirum DSM 43827] Length = 358 Score = 150 bits (380), Expect = 4e-34, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 97/259 (37%), Gaps = 33/259 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ ++ + G + ++++ ++ L F Q S M Sbjct: 2 LNFIYYPVSFILWCWHWVFGRIFGESSGIAWALSVIFLVFTLRALLFKPFVGQVRSMRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + P++ ++++K+ Q + M +L H +NPL GC P+L+QIPVF ++ V+ Sbjct: 62 QEFAPELQKIKKKYAND-RQRQAQEMQKLQAEHGVNPLGGCLPMLVQIPVFIGLFHVLRS 120 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG-------------FMHVGIWPII 496 ++ + + +F +P ++ Sbjct: 121 FKPGWGEVYFFDKAGVDSFVQAKLFGANLSTFITMPADQLELFSTSRTAVMAVAIPLAVV 180 Query: 497 MSLSMFIQ-----MKMSPPPADKGQAMIL-----NWMPVVFVFALSSFPAGLIIYWSWSN 546 +++ + + A+ Q I+ P+ + FP +++YW +N Sbjct: 181 AAVATHFTGRHSVARQTQAAAENPQTAIMNKLVVYVFPLGALAGGFFFPVAILLYWLSNN 240 Query: 547 VISIVQQAVIMKMHGAEIG 565 +++QQ V+ E Sbjct: 241 GWTLMQQRVVYGRIDREEA 259 >gi|315038841|ref|YP_004032409.1| hypothetical protein LA2_08525 [Lactobacillus amylovorus GRL 1112] gi|312276974|gb|ADQ59614.1| hypothetical protein LA2_08525 [Lactobacillus amylovorus GRL 1112] Length = 322 Score = 150 bits (380), Expect = 5e-34, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 106/258 (41%), Gaps = 36/258 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQY----VSTA 387 +GW Y ++ +P+ +M +++G G I++ T V+L+ PL Q Sbjct: 39 YGWVYQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQTAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGMGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + + T+F ++ Y+ Sbjct: 159 WGIYQAVFYSPQLAHSTFFGISLSQKSVVLAIVATVFTVIQGYISLIGI----------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P K ++ P++ +F SF L +YW+ N+++I+QQ ++ + Sbjct: 208 --------PEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVTIIQQLIVTFVL 259 Query: 561 GAEIGLIDRLRSTFSKNY 578 ++ + + Sbjct: 260 TPKVK--QHVAEELKEKP 275 >gi|319758802|gb|ADV70744.1| preprotein translocase subunit YidC [Streptococcus suis JS14] Length = 326 Score = 150 bits (379), Expect = 5e-34, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 34/250 (13%) Query: 338 WFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMKNI 392 + ++ +PM L+ +F + FG+AI++ T+ V+ + PL Q A M + Sbjct: 58 IWDWLGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYL 117 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + ++E+ K + Q Q A Q Y K + ++ L G C P+L+Q+P F AIY Sbjct: 118 KPILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFA 177 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + A F G + + I T+ + +Y + M+ Sbjct: 178 ARHTPGISEATFLG----INLGSTSLILTVVAGILYYAQSLL----------------MQ 217 Query: 507 MSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + K Q + M P++ + PAG+ +YW + I+QQA+ + + Sbjct: 218 VGMDEEQKKQMKTMALMNPIMIMMFSFGSPAGVTLYWVVGGLFGILQQAITNFIL--KPR 275 Query: 566 LIDRLRSTFS 575 + ++ F Sbjct: 276 IRKQVEEEFK 285 >gi|307105163|gb|EFN53413.1| hypothetical protein CHLNCDRAFT_136603 [Chlorella variabilis] Length = 496 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 115/273 (42%), Gaps = 40/273 (14%) Query: 335 DWGWFYFIAKPMFMLMSYFYN------LVGNFGIAIMLTTVFVKLLFFPLAKKQ------ 382 D GW + + ++++ + + ++G +I+ T +KL FPL KKQ Sbjct: 136 DNGWLQPLVTGLETVLTFIEDGLVRVGVPYSYGWSIVALTALIKLATFPLTKKQARPGPG 195 Query: 383 ------------YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 S N++ ++P+ID ++E++ + +Q+ LY+ ++PLAGC Sbjct: 196 PPAPFRPCLPPRVESALNVQRLKPQIDAIKEQYGDNKD-AVQRETSALYEKAGVDPLAGC 254 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPF--WGWIKDLAAADPTNIFTLFGILPFYLP--- 485 P L IP+F +Y+ +S + A + WI LA + LP Sbjct: 255 LPSLATIPIFIGLYRSLSDFSTQQEAGSAAFYWIPSLAGPTSVAAQKAGSGTAWLLPLVD 314 Query: 486 GFMHVGI-----WPIIMSLSMFIQMKMSPPPAD-----KGQAMILNWMPVVFVFALSSFP 535 G +G + + ++PP D K ++ +P++ + + P Sbjct: 315 GVPPIGWDLASRYLALPVALYISNAIITPPQTDDSGAAKFTQNLVKVLPLMIGWFALNVP 374 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 AGL +Y+ + V + QQ + K+ GA + D Sbjct: 375 AGLSLYYFSNTVFTTAQQVYLKKLGGANLAEYD 407 >gi|111020651|ref|YP_703623.1| putative inner membrane protein translocase component YidC [Rhodococcus jostii RHA1] gi|110820181|gb|ABG95465.1| probable membrane protein, OxaA family protein [Rhodococcus jostii RHA1] Length = 370 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 102/285 (35%), Gaps = 55/285 (19%) Query: 339 FYFIAKPMFMLMSYFYNLVG-----------NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 FI P+ ++ ++ + G + ++++ ++ + + KQ +T Sbjct: 2 LDFIYYPVSGILWVWHKVFGAIPFLGPDSGITWALSVVFLVFTLRAVLYKPFVKQVRTTR 61 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ +QP+I L++K+ Q M +L K H NP+ GC P+L Q PVF ++ V+ Sbjct: 62 QMQELQPQIKALQKKYSGD-RQRQAVEMQKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVL 120 Query: 448 S------------------------ISLEMRHAPFWGWIKDLAAADPTNI---------F 474 + + + A I F Sbjct: 121 RSFNRTGTGIGQLGMSVEANANTPNYFFSVEDVQSFLSARLFGAPISAWITMPKAQLDAF 180 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMP 524 +G +P L + II S++ + SP A Q+ I+ P Sbjct: 181 AAYGPIPTVLNIAVVAVPLMIIASIATHFNSRASVARQSPEAAANPQSAIMNKLALWIFP 240 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + + P +++YW +N+ + QQ ++ + E + Sbjct: 241 LGVLVGGPFLPIAILLYWVSNNIWTYGQQHIVFRRIDQEEEEKKQ 285 >gi|219120081|ref|XP_002180787.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407503|gb|EEC47439.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 467 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 122/265 (46%), Gaps = 32/265 (12%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVG----------NFGIAIMLTTVFVKLLFFPLAKKQYV 384 D GW+ + ++ ++ + ++G++I + T V+ L PL+ +Q Sbjct: 105 DGGWWGAYIQLFKTTLNAVHSTIQGPLQNVGIEQSWGVSIAIFTTIVRTLLVPLSIEQSK 164 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S +K+++P + +++ K+K + + +A +LY+ NPLAGC+ L+Q+PVF +Y Sbjct: 165 SAEYIKSLKPYVADIKAKYKNN-QEAQNRATAKLYEDAQQNPLAGCFVALIQLPVFLGLY 223 Query: 445 KVISI-SLEMRHAPFWGWIKDLAAAD-PTNIFTLFGILPFYLPGFMHVGI--------WP 494 + + + +++ + WI L P N L ++ ++ G +G P Sbjct: 224 RGVRLLAMDGVLEEPFLWIPSLEGPVAPPNFQGLDWLVQGWVNGAPALGWETTLAFLIMP 283 Query: 495 IIMSLSMFIQMKMSPPPADKGQAM-----------ILNWMPVVFVFALSSFPAGLIIYWS 543 +I+ + + M++ PP D+ IL ++P++ F PAGL IYW Sbjct: 284 VILVVLQSVTMQVLQPPVDEDATKEERETLERSQTILKFLPLLIGFFALQVPAGLTIYWF 343 Query: 544 WSNVISIVQQAVIMKMHGAEIGLID 568 SN+ ++ Q + A I+ Sbjct: 344 TSNIFTLTQSLAVRAYFSANPPQIE 368 >gi|317509424|ref|ZP_07967042.1| YidC/Oxa1 family membrane protein insertase [Segniliparus rugosus ATCC BAA-974] gi|316252253|gb|EFV11705.1| YidC/Oxa1 family membrane protein insertase [Segniliparus rugosus ATCC BAA-974] Length = 320 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 107/287 (37%), Gaps = 57/287 (19%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F+ P+ ++ ++ + + ++++ ++ L + A +Q M Sbjct: 2 LDFVYYPVSGVLWLWHWVFSQILGPESGFGWALSVVALVCTLRALLYAPAIRQIRFMRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + IQP++ ++ K+ + Q M +L K H NPL GC P+LLQIPVF +Y V+S Sbjct: 62 QEIQPQMKAIQTKYAKD-RQRQALEMQKLQKEHGFNPLLGCLPMLLQIPVFIGLYHVLSS 120 Query: 450 SLEMRHAPFWG-------------------------------------WIKDLAAADPTN 472 A F G +I + AA+ Sbjct: 121 FNRTAGAFFSGGGSMTPEQNRNTKNYVFSPHDVQSFLESRFFGVPLSSYITEPAASFNAF 180 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSPPPAD---KGQAMILNWM---- 523 I + +I S++ + + +S PAD + QA ++ M Sbjct: 181 IKAGSAVDFQRWQIAAVAIPLMLIASVATHMNSRASLSRQPADVSEQPQAAMMRVMSLWV 240 Query: 524 -PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P+ + + P L++YW +N + QQ ++ + E R Sbjct: 241 FPLGVLIFGWASPIALLLYWVSNNAWTYGQQHLVFRKIDREDEEKKR 287 >gi|312866151|ref|ZP_07726372.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei F0415] gi|311098555|gb|EFQ56778.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei F0415] Length = 319 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 32/251 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNIQ 393 + + KPM L++YF +G +G +++ V V+LL PL Q A +++ Sbjct: 37 WNLLGKPMSNLITYFAQNLGLGYGWGLVIVIVLVRLLILPLGLHQSRSAAYQAAKREHLA 96 Query: 394 PKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P + + +K K++ Q Q ++Q + + I+ L G C P+L+Q P F A+Y Sbjct: 97 PIFEPINKKLKEATTQEEKMAAQTELMQANRDNGISMLGGMGCLPLLIQFPFFSAMYWAA 156 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + + + F V I I+ + ++ + Sbjct: 157 RYTPGILKSN-------------------FLWFNLGNRDIPIVAIIAILYLIQAWLGAQQ 197 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P K M + P++ V S P+ ++IYW + SI+QQ + + + L Sbjct: 198 MPEEQRKQAGMTMYMTPIIMVIFGFSQPSAVVIYWFVGGIFSIIQQLIANYIF--KPRLR 255 Query: 568 DRLRSTFSKNY 578 ++ F KN Sbjct: 256 KQVEEEFKKNP 266 >gi|253752397|ref|YP_003025538.1| membrane protein OxaA 2 precursor [Streptococcus suis SC84] gi|253754223|ref|YP_003027364.1| membrane protein OxaA 2 precursor [Streptococcus suis P1/7] gi|253756157|ref|YP_003029297.1| membrane protein OxaA 2 precursor [Streptococcus suis BM407] gi|251816686|emb|CAZ52327.1| membrane protein OxaA 2 precursor [Streptococcus suis SC84] gi|251818621|emb|CAZ56455.1| membrane protein OxaA 2 precursor [Streptococcus suis BM407] gi|251820469|emb|CAR47193.1| membrane protein OxaA 2 precursor [Streptococcus suis P1/7] Length = 304 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 34/250 (13%) Query: 338 WFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMKNI 392 + ++ +PM L+ +F + FG+AI++ T+ V+ + PL Q A M + Sbjct: 36 IWDWLGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYL 95 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + ++E+ K + Q Q A Q Y K + ++ L G C P+L+Q+P F AIY Sbjct: 96 KPILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFA 155 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + A F G + + I T+ + +Y + M+ Sbjct: 156 ARHTPGISEATFLG----INLGSTSLILTVVAGILYYAQSLL----------------MQ 195 Query: 507 MSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + K Q + M P++ + PAG+ +YW + I+QQA+ + + Sbjct: 196 VGMDEEQKKQMKTMALMNPIMIMMFSFGSPAGVTLYWVVGGLFGILQQAITNFIL--KPR 253 Query: 566 LIDRLRSTFS 575 + ++ F Sbjct: 254 IRKQVEEEFK 263 >gi|227890587|ref|ZP_04008392.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus salivarius ATCC 11741] gi|227867525|gb|EEJ74946.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus salivarius ATCC 11741] gi|300214345|gb|ADJ78761.1| 60 kDa inner membrane protein [Lactobacillus salivarius CECT 5713] Length = 307 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 111/258 (43%), Gaps = 38/258 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G+ Y +A P L+ + ++G ++G +I++ T V+L+ P+ Q + Sbjct: 33 YGFIYEKLAIPTQHLLEWLSGVLGGSYGWSIIVITFIVRLIMMPIMINQSKKATIQQEKI 92 Query: 390 KNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 I+P++ +++E+ K + +AM++LY+ +NI+ + G C P+L+Q+P+F A+ Sbjct: 93 AMIRPQLAKIQEQQKNAKTPEERNAASQAMMKLYQENNISMVGGIGCLPLLIQMPIFAAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ F G + + F + + + L G++ P Sbjct: 153 YAAIQYSPELSKTTFMG----INLGHRSFTFVVLTFVIYALQGWLSTLGLP--------- 199 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K ++ PV+ PAGL +Y+ + + +Q +I M Sbjct: 200 ------EEQKKQMQSMIIVSPVMLTGMTYISPAGLGLYFFIGGIFACIQTLIINFM---- 249 Query: 564 IGLIDRLRSTFSKNYNSQ 581 R+R K ++ Sbjct: 250 ---RPRIRKDIKKELKNK 264 >gi|71902952|ref|YP_279755.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS6180] gi|71802047|gb|AAX71400.1| inner membrane protein [Streptococcus pyogenes MGAS6180] Length = 307 Score = 150 bits (378), Expect = 7e-34, Method: Composition-based stats. Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + F+ KPM + YF N G +G+AI++ T+ V+ L PL Q + M + Sbjct: 37 IWEFLGKPMSYFIDYFANNAGLGYGLAIIIVTIIVRTLILPLGLYQSWKASYQSEKMAFL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 97 KPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G DL + + + L F+ ++ M Sbjct: 157 AQYTKGVSTSTFMGI--DLGSR-SLVLTAIIAALYFF----------------QSWLSMM 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + ++ MP++ +F S PAG+ +YW SI+QQ + + + L Sbjct: 198 AVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFFSIIQQLITT--YLLKPRL 255 Query: 567 IDRLRSTFSKNY 578 +++ ++KN Sbjct: 256 HKQIKEEYAKNP 267 >gi|146319369|ref|YP_001199081.1| preprotein translocase subunit YidC [Streptococcus suis 05ZYH33] gi|145690175|gb|ABP90681.1| Preprotein translocase subunit YidC [Streptococcus suis 05ZYH33] Length = 326 Score = 150 bits (378), Expect = 7e-34, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 34/250 (13%) Query: 338 WFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMKNI 392 + ++ +PM L+ +F + FG+AI++ T+ V+ + PL Q A M + Sbjct: 58 IWDWLGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYL 117 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + ++E+ K + Q Q A Q Y K + ++ L G C P+L+Q+P F AIY Sbjct: 118 KPILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFA 177 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + A F G + + I T+ + +Y + M+ Sbjct: 178 ARHTPGISEATFLG----INLGSTSLILTVVAGILYYAQSLL----------------MQ 217 Query: 507 MSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + K Q + M P++ + PAG+ +YW + I+QQA+ + + Sbjct: 218 VGMDEEQKKQMKTMALMNPIMIMMFSFGSPAGVTLYWVVGGLFGILQQAITNFIL--KPR 275 Query: 566 LIDRLRSTFS 575 + ++ F Sbjct: 276 IRKQVEEEFK 285 >gi|332638155|ref|ZP_08417018.1| cell division protein [Weissella cibaria KACC 11862] Length = 277 Score = 150 bits (378), Expect = 7e-34, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 92/246 (37%), Gaps = 23/246 (9%) Query: 337 GWFY--FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 G+++ IA ++ N+G+ I++ T+ ++LL PL Q S M+ + P Sbjct: 38 GFWHGIIIANFSRSILGVSAWFGNNYGLGIIVFTLLIRLLILPLMVYQTRSMRKMQEVAP 97 Query: 395 KIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + ++ K+ + +Q LYK +NP A P+++Q+P+ A+Y I + Sbjct: 98 ALKAIQAKYPNRDTESMAAMQAEQSALYKEAGVNPFASLLPLIVQMPILIALYTAIRTTK 157 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 ++ L D I + L + ++ + + P Sbjct: 158 QLETGT--FLWAQLGQHDHLFILPILAALFTFASSYLVM----------------LGQPE 199 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 + + MP++ + P+ L +YW SN + Q I + + Sbjct: 200 KNGMTTSMTYIMPIMIFIFAINVPSALSLYWVVSNAFQVAQTWTIQNPFEIRREREAKKQ 259 Query: 572 STFSKN 577 + + Sbjct: 260 AERDRE 265 >gi|15674505|ref|NP_268679.1| OxaA-like protein [Streptococcus pyogenes M1 GAS] gi|71910109|ref|YP_281659.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS5005] gi|38503157|sp|Q9A1C3|OXAA2_STRP1 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|13621607|gb|AAK33400.1| hypothetical protein SPy_0351 [Streptococcus pyogenes M1 GAS] gi|71852891|gb|AAZ50914.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS5005] Length = 307 Score = 150 bits (378), Expect = 7e-34, Method: Composition-based stats. Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + F+ KPM + YF N G +G+AI++ T+ V+ L PL Q + M + Sbjct: 37 IWEFLGKPMSYFIDYFANNAGLGYGLAIIIVTIIVRTLILPLGLYQSWKASYQSEKMAFL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 97 KPVFEPINKRIKQANSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G DL + + + L F+ ++ M Sbjct: 157 AQYTKGVSTSTFMGI--DLGSR-SLVLTAIIAALYFF----------------QSWLSMM 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + ++ MP++ +F S PAG+ +YW SI+QQ + + + L Sbjct: 198 AVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFFSIIQQLITT--YLLKPRL 255 Query: 567 IDRLRSTFSKNY 578 +++ ++KN Sbjct: 256 HKQIKEEYAKNP 267 >gi|257065515|ref|YP_003145187.1| preprotein translocase subunit YidC [Slackia heliotrinireducens DSM 20476] gi|256793168|gb|ACV23838.1| preprotein translocase subunit YidC [Slackia heliotrinireducens DSM 20476] Length = 257 Score = 150 bits (378), Expect = 7e-34, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 116/235 (49%), Gaps = 7/235 (2%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F + +F N+ G++G+AI++ TV +++ P+ Q S+ M+ +QP + E++ K+ Sbjct: 8 WIFDCIQFFANVCGDWGLAIIIITVIFRVIVSPIMHSQIKSSYQMQKVQPLMQEIQTKYA 67 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA---PFWGW 461 + +Q+ M +LY + NPLAGC P+ LQ+P+F A+++ + F+ Sbjct: 68 NDQAR-MQEEMQKLYAETHFNPLAGCLPMFLQMPIFIAMFQTLRELASHGTGEVYTFYTI 126 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 ++DL FG +LP + + ++ + M +Q S ++ Sbjct: 127 VEDLTKTPKDMWAVGFGD---FLPYLVLMLVFAFATFVPMMLQNMKSDSAQRNQMLIMGG 183 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 M ++ ++ S PAG++++W S++I I QQ + ++ ++ + + K Sbjct: 184 MMTLMMLWISWSSPAGVLLFWGASSIIGIAQQQITQRILRSQDEAAEAAKPIEYK 238 >gi|157149832|ref|YP_001449500.1| membrane protein oxaA 1 precursor [Streptococcus gordonii str. Challis substr. CH1] gi|157074626|gb|ABV09309.1| Membrane protein oxaA 1 precursor [Streptococcus gordonii str. Challis substr. CH1] Length = 271 Score = 149 bits (377), Expect = 9e-34, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 107/252 (42%), Gaps = 35/252 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + YF A+ + F + G+ GI I+L T+ ++ + P+ + Q S+ M+ QP I Sbjct: 37 FVYFFAETIR-----FLSFNGSTGIGIILFTIIIRTVLLPVFQIQMTSSRKMQEAQPHIK 91 Query: 398 ELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L+ K+ + +L +LYK +NPLA P+ +Q+PV A+Y+ ++ +R Sbjct: 92 ALQAKYPGKDMESRNLLATETQKLYKELGVNPLASFIPLFVQMPVLIALYQALTRVAFLR 151 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---P 511 +LA DP I P++ +L F+ ++ Sbjct: 152 TG--HFLWLNLAETDPYYIL-------------------PVLAALFTFLSTWLNNKGLAE 190 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI---MKMHGAEIGLID 568 + ++ MP++ + +F +G+ +YW+ SN + Q V+ KM ++ Sbjct: 191 RNGAMTVMTYLMPLMIFWFALTFSSGVALYWTVSNAYQVGQTLVLSNPFKMIAEREAKLN 250 Query: 569 RLRSTFSKNYNS 580 R K + Sbjct: 251 AAREQEEKKKRA 262 >gi|21909792|ref|NP_664060.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS315] gi|28896515|ref|NP_802865.1| OxaA-like protein precursor [Streptococcus pyogenes SSI-1] gi|209558852|ref|YP_002285324.1| OxaA-like protein precursor [Streptococcus pyogenes NZ131] gi|38503041|sp|Q8K8J2|OXAA2_STRP3 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|21903977|gb|AAM78863.1| putative SpoIIIJ family protein [Streptococcus pyogenes MGAS315] gi|28811769|dbj|BAC64698.1| hypothetical protein [Streptococcus pyogenes SSI-1] gi|209540053|gb|ACI60629.1| Membrane protein oxaA 2 precursor [Streptococcus pyogenes NZ131] Length = 307 Score = 149 bits (377), Expect = 9e-34, Method: Composition-based stats. Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + F+ KPM + YF N G +G+AI++ T+ V+ L PL Q + M + Sbjct: 37 IWEFLGKPMSYFIDYFANNAGLGYGLAIIIVTIIVRTLILPLGLYQSWKASYQSEKMAFL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 97 KPVFEPINKRIKQANSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G DL + + + L F+ ++ M Sbjct: 157 AQYTKGVSTSTFMGI--DLGSR-SLVLTAIIAALYFF----------------QSWLSMM 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + ++ MP++ +F S PAG+ +YW SI+QQ + + + L Sbjct: 198 AVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFFSIIQQLITT--YLLKPRL 255 Query: 567 IDRLRSTFSKNY 578 +++ ++KN Sbjct: 256 HKQIKEEYAKNP 267 >gi|153956505|ref|YP_001397270.1| inner membrane protein translocase component YidC [Clostridium kluyveri DSM 555] gi|219856808|ref|YP_002473930.1| hypothetical protein CKR_3465 [Clostridium kluyveri NBRC 12016] gi|146349363|gb|EDK35899.1| OxaA [Clostridium kluyveri DSM 555] gi|219570532|dbj|BAH08516.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 221 Score = 149 bits (377), Expect = 9e-34, Method: Composition-based stats. Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 22/226 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +F F+ + + L+ N ++GIAI+L T+ ++++ PL KQ S+ M IQP++ Sbjct: 11 FFEFLHRNVTSLIP---NQNISYGIAIILMTLIIRIIILPLGVKQLKSSLIMNEIQPEVK 67 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+EK+K+ P Q Q+ M++LYK +P +GC P+L+Q P+ A+Y V + + Sbjct: 68 KLQEKYKKDP-QRAQQEMMKLYKEKGASPFSGCLPLLIQWPILIALYYVFNNLSGINGVS 126 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DLA D + L GI + LS + M + K Sbjct: 127 -FLWISDLAKRD-IFLAILSGITTY----------------LSTYFMMSSNNSEQAKQTQ 168 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + M VF F + L++YW SN+I I Q VI ++ + Sbjct: 169 TMNIGMSGFMVFMSLGFKSALVLYWVVSNLIQIAQTLVIKRIGSKK 214 >gi|241895504|ref|ZP_04782800.1| stage III sporulation protein J precursor [Weissella paramesenteroides ATCC 33313] gi|241871250|gb|EER75001.1| stage III sporulation protein J precursor [Weissella paramesenteroides ATCC 33313] Length = 277 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 21/239 (8%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 IA ++ N+GI I++ T+ ++LL PL Q S M+ I P + +L+ Sbjct: 44 IIANFSRSILGVSAWFGDNYGIGIIVFTLLIRLLILPLMVYQTGSMRKMQEIGPALKKLQ 103 Query: 401 EKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 EK+ P Q +Q QLYK +NP A P+++Q+P+ A+Y I + + Sbjct: 104 EKYSSRDPETMQAMQAEQKQLYKDAGVNPFASFIPLIVQMPILIALYTAIRTTKLLETGT 163 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F+ L DP I + L + ++ + M P + Sbjct: 164 FFWV--QLGDRDPYFILPILAALFTFASSYLVM----------------MGQPEKNGMTT 205 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + MP++ S P+ L +YW SN + Q I + + +K Sbjct: 206 SMTYIMPIMIFIFAISVPSALSLYWVISNAFQVAQTWTIQNPFEIRREREAKKEAERAK 264 >gi|218755713|ref|ZP_03534509.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis GM 1503] gi|297636608|ref|ZP_06954388.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis KZN 4207] gi|308371552|ref|ZP_07667203.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|308336269|gb|EFP25120.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] Length = 363 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 102/271 (37%), Gaps = 48/271 (17%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQY 383 + D+ FI P+ +M +Y L + +++M ++ L + +Q Sbjct: 1 MFDFFSLDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQI 60 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF + Sbjct: 61 RTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGL 119 Query: 444 YKVISISLEMRHAPFWGWIK---------------DLAAADPTNIF------------TL 476 Y V+ + D+ N+F L Sbjct: 120 YHVLRSFNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGL 179 Query: 477 FGILPFYLPGFMHVG-IWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMPV 525 + F P + VG I+ ++ + + S A Q ++ P+ Sbjct: 180 DAFVDFSRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFPL 239 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V P +I+YW +N+ + QQ + Sbjct: 240 GVVVGGPFLPLAIILYWFSNNIWTFGQQHYV 270 >gi|223933720|ref|ZP_03625694.1| 60 kDa inner membrane insertion protein [Streptococcus suis 89/1591] gi|330833337|ref|YP_004402162.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3] gi|223897601|gb|EEF63988.1| 60 kDa inner membrane insertion protein [Streptococcus suis 89/1591] gi|329307560|gb|AEB81976.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3] Length = 304 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 34/250 (13%) Query: 338 WFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMKNI 392 + ++ +PM L+ +F + FG+AI++ T+ V+ + PL Q A M + Sbjct: 36 IWDWLGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYL 95 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + ++E+ K + Q Q A Q Y K + ++ L G C P+L+Q+P F AIY Sbjct: 96 KPILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFA 155 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + A F G + + I T+ + +Y + M+ Sbjct: 156 ARHTPGISEATFLG----INLGSTSLILTVVAGILYYAQSLL----------------MQ 195 Query: 507 MSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + K Q + M P++ + PAG+ +YW + I+QQA+ + + Sbjct: 196 VGMDEEQKKQMKTMALMNPIMIMMFSFGSPAGVTLYWVVGGLFGILQQAITNFIL--KPR 253 Query: 566 LIDRLRSTFS 575 + ++ F Sbjct: 254 IRKQVEEEFK 263 >gi|171780265|ref|ZP_02921169.1| hypothetical protein STRINF_02053 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281613|gb|EDT47048.1| hypothetical protein STRINF_02053 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 249 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 90/230 (39%), Gaps = 31/230 (13%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNIQPKIDELREKFKQSPPQ----V 410 FG+AI+L T+ V+ + PL Q + M ++P + E+ + + Q Sbjct: 4 GFGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYLKPIFAPINERMRNATTQEEKLA 63 Query: 411 LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q ++ K + IN L G C P+L+Q+P F A+Y + + + F G Sbjct: 64 AQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAAQYTQGVSGSTFLG-------- 115 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 + + I+ ++ M+ + MP++ V Sbjct: 116 -----------IDLGSRSMPLTAVIAILYFFQSWLSMQAVAEEQRAAMKGTMYVMPLMMV 164 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 F S PA +++YW SI+QQ + M + + L ++ F KN Sbjct: 165 FFGMSMPASVLLYWLVGGFFSIIQQLITMFII--KPKLRKQIAEEFEKNP 212 >gi|90961500|ref|YP_535416.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118] gi|90820694|gb|ABD99333.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118] Length = 307 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 111/258 (43%), Gaps = 38/258 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G+ Y +A P L+ + ++G ++G +I++ T V+L+ P+ Q + Sbjct: 33 YGFIYEKLAMPTQHLLEWLSGVLGGSYGWSIIVITFIVRLIMMPIMINQSKKATIQQEKI 92 Query: 390 KNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 I+P++ +++E+ K + +AM++LY+ +NI+ + G C P+L+Q+P+F A+ Sbjct: 93 AMIRPQLAKIQEQQKNAKTPEERNAASQAMMKLYQENNISMVGGIGCLPLLIQMPIFAAL 152 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ F G + + F + + + L G++ P Sbjct: 153 YAAIQYSPELSKTTFMG----INLGHRSFTFVVLTFVIYALQGWLSTLGLP--------- 199 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K ++ PV+ PAGL +Y+ + + +Q +I M Sbjct: 200 ------EEQKKQMQSMIIVSPVMLTGMTYISPAGLGLYFFIGGIFACIQTLIINFM---- 249 Query: 564 IGLIDRLRSTFSKNYNSQ 581 R+R K ++ Sbjct: 250 ---RPRIRKDIKKELKNK 264 >gi|22122905|gb|AAM92288.1| putative cytochrome oxidase assembly protein [Oryza sativa Japonica Group] gi|78708924|gb|ABB47899.1| Inner membrane protein OXA1-like, mitochondrial precursor, putative, expressed [Oryza sativa Japonica Group] Length = 413 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 93/226 (41%), Gaps = 20/226 (8%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +F + ++ Y + G N+ I L TV ++ PL Q +T + I+P+++ Sbjct: 122 FFPVAALQHVIDYIHTFTGLNWWACIALATVLIRSATVPLLVNQLKATQKLNAIRPEMEA 181 Query: 399 LREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--- 452 ++E+ P+ ++ M L++ H ++P +L+Q P+F + + I ++ Sbjct: 182 IKEEMNAMDPKSAKEGKAKMTALFQKHGVSPFTPLKGLLIQGPIFMSFFFAIRNMIDKVP 241 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 W DL DP I + L F ++++ + +Q M P Sbjct: 242 SMKGGGSLWFTDLTTPDPLYILPVLTALIF-------------LVTVELNLQEGMEGNPM 288 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + M V+ V SF G+ YW SN+ ++ VI + Sbjct: 289 ARKMKNFSRGMAVLTVPFTMSFAKGIFCYWITSNLFTLTYGFVIRR 334 >gi|325957280|ref|YP_004292692.1| hypothetical protein LAC30SC_08260 [Lactobacillus acidophilus 30SC] gi|325333845|gb|ADZ07753.1| hypothetical protein LAC30SC_08260 [Lactobacillus acidophilus 30SC] Length = 322 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 105/258 (40%), Gaps = 36/258 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQY----VSTA 387 +GW Y ++ +P+ +M +++G G I++ T V+L+ PL Q Sbjct: 39 YGWVYQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQTAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGMGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + + T+F ++ Y+ Sbjct: 159 WGIYQAVFYSPQLAHSTFFGISLSQKSVVLAIVATVFTVIQGYISLIGI----------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P K ++ P++ +F SF L +YW+ N++ I+QQ ++ + Sbjct: 208 --------PEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIIQQLIVTFVL 259 Query: 561 GAEIGLIDRLRSTFSKNY 578 ++ + + Sbjct: 260 TPKVK--QHVAEELKEKP 275 >gi|242241497|ref|ZP_04795942.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis W23144] gi|242235040|gb|EES37351.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis W23144] Length = 305 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 116/263 (44%), Gaps = 35/263 (13%) Query: 335 DWGWFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----AN 388 D +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ Sbjct: 44 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 103 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 104 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 163 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F + Sbjct: 164 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF----------------I 205 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IM 557 + K P + M++ P++ ++ + L +YWS S + ++Q I Sbjct: 206 QAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANIY 265 Query: 558 KMHGAEIGLIDRLRSTFSKNYNS 580 A+ + + ++ S Sbjct: 266 YSKLAKKEVQPFIEKYEREHNPS 288 >gi|327184010|gb|AEA32457.1| hypothetical protein LAB52_07690 [Lactobacillus amylovorus GRL 1118] Length = 322 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 105/258 (40%), Gaps = 36/258 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQY----VSTA 387 +GW Y ++ +P+ +M +++G G I++ T V+L+ PL Q Sbjct: 39 YGWVYQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQTAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGMGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + + T+F ++ Y+ Sbjct: 159 WGIYQAVFYSPQLAHSTFFGISLSQKSVVLAIVATVFTVIQGYISLIGI----------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P K ++ P++ +F SF L +YW+ N++ I+QQ ++ + Sbjct: 208 --------PEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIIQQLIVTFVL 259 Query: 561 GAEIGLIDRLRSTFSKNY 578 ++ + + Sbjct: 260 TPKVK--QHVAEELKEKP 275 >gi|194466629|ref|ZP_03072616.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri 100-23] gi|194453665|gb|EDX42562.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri 100-23] Length = 316 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 34/255 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G+ Y ++AKPM LM + + +GN +G AI++ V V+ + P+ Q M Sbjct: 32 YGFVYDYMAKPMQHLMEWLASHMGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKM 91 Query: 390 KNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +QP I EL EK K + Q + M+ LY+ +NI+ G C P+L+Q+P+F A+ Sbjct: 92 SKVQPLIKELTEKQKAAKTPEEQAAVSQQMMALYRDNNISLTGGIGCLPLLIQLPIFAAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S ++ HA F+G + P+ I + + + ++ + P Sbjct: 152 YAAIRYSPDLYHATFFG----IPLGKPSIILAVLSFIAYAAQSYLGLVGVP--------- 198 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K + P + F + AGL +Y+ + +I+Q ++ Sbjct: 199 ------EAQKKQMKAAIWMSPFMTFFISITSSAGLGLYFFIGGLFAILQTLMVN---AYR 249 Query: 564 IGLIDRLRSTFSKNY 578 + ++ KN Sbjct: 250 PRIRRQIEEESKKNP 264 >gi|160932432|ref|ZP_02079822.1| hypothetical protein CLOLEP_01267 [Clostridium leptum DSM 753] gi|156868391|gb|EDO61763.1| hypothetical protein CLOLEP_01267 [Clostridium leptum DSM 753] Length = 352 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 117/291 (40%), Gaps = 54/291 (18%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F +I L+ +FY N+G++I+L T+ +K++ FP + KQ S A +Q K Sbjct: 3 IFSWIGNVFGYLLWFFYEFTKNYGVSIILFTIVLKIIMFPFSIKQQKSMAKNTRLQGKQK 62 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW----PILLQIPVFFAIYKVISISLEM 453 E+++K+ + Q + + M +LY+ +NP+ GC P+++ + +++++ + +L + Sbjct: 63 EIQKKYGDNK-QKMSEEMQKLYQQEGVNPMGGCLTSIIPLIIMMGIYYSVVNPLQNTLHI 121 Query: 454 RHA--------------------PFWGWIKDLAAAD------PTNIFTLFGILPFYLPGF 487 + F+G I + D P + + GF Sbjct: 122 AGSKVTEAMQLLQQVPGVGNLFSGFYGEIDLVKHFDFFKDFLPMFSADEAANIASFGQGF 181 Query: 488 MHVGI-----------------WPIIMSLSMFIQMKMSPPPADKGQAM------ILNWMP 524 +G+ P++ +S + + P AM ++ +P Sbjct: 182 NFLGLNLLDTPQSSSFSSMLWLIPVLCLVSSLVTQWLMPKITGNQMAMQGCMKWMMFILP 241 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 + + + PA + YW + V+ +Q V+ + A+ + + + Sbjct: 242 LFSAWIAYTVPAAVGFYWIINTVLQFLQTWVLNIFYNADTMIAKEEAARIA 292 >gi|94989800|ref|YP_597900.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS10270] gi|94543308|gb|ABF33356.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10270] Length = 307 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + F+ KPM + YF N G +G+AI++ T+ V+ L PL Q + M + Sbjct: 37 IWEFLGKPMSYFIDYFANNAGLGYGLAIIIVTIIVRTLILPLGLYQSWKASYQSEKMTFL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 97 KPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F + + I + ++ M Sbjct: 157 AQYTKGVSTST-------------------FMSIDLGSRSLVLTAIIAALYFFQSWLSMM 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + ++ MP++ +F S PAG+ +YW SI+QQ + + + L Sbjct: 198 AVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFFSIIQQLITT--YLLKPRL 255 Query: 567 IDRLRSTFSKNY 578 +++ ++KN Sbjct: 256 HKQIKEEYAKNP 267 >gi|139474368|ref|YP_001129084.1| OxaA-like protein precursor [Streptococcus pyogenes str. Manfredo] gi|134272615|emb|CAM30882.1| membrane protein OxaA 2 precursor [Streptococcus pyogenes str. Manfredo] Length = 307 Score = 149 bits (375), Expect = 2e-33, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + F+ KPM + YF N G +G+AI++ T+ V+ L PL Q + M + Sbjct: 37 IWEFLGKPMSYFIDYFANNAGLGYGLAIIIVTIIVRTLILPLGLYQSWKASYQSEKMTFL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 97 KPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G DL + + + L F+ ++ M Sbjct: 157 AQYTKGVSTSTFMGI--DLGSR-SLVLTAIIAALYFF----------------QSWLSMM 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + ++ MP++ +F S PAG+ +YW SI+QQ + + + L Sbjct: 198 AVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFFSIIQQLITT--YLLKPRL 255 Query: 567 IDRLRSTFSKNY 578 +++ ++K Sbjct: 256 HKQIKEEYAKTP 267 >gi|28209867|ref|NP_780811.1| putative inner membrane protein translocase component YidC [Clostridium tetani E88] gi|38502981|sp|Q899S4|OXAA_CLOTE RecName: Full=Membrane protein oxaA gi|28202302|gb|AAO34748.1| conserved membrane protein [Clostridium tetani E88] Length = 220 Score = 149 bits (375), Expect = 2e-33, Method: Composition-based stats. Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 30/226 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +F I K + +++ N ++G+AI+ T+ +KL+ PL K ST + IQP+I Sbjct: 11 FFVIIHKFISSIIT---NPNYSYGVAIIFVTLIIKLILLPLNIKSMRSTIRINEIQPEIQ 67 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ++++K+K P Q LQ+ ++LYK +NINP C P+LLQ P+ A+Y V + + Sbjct: 68 KIQKKYKNDP-QRLQQEQMKLYKEYNINPFGSCLPLLLQWPILIALYYVFNNIQGISGVS 126 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W+KDLA+ D + ++ + + + P D QA Sbjct: 127 -FLWVKDLASPD---------------------IVLAVLAGATQYYSGLLMNPKGDNTQA 164 Query: 518 M----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + M ++ +F S A L+IYW N+I + Q + K+ Sbjct: 165 KTASNMNLSMSIMMIFISSRLKAALVIYWVTGNLIQMGQTILTKKL 210 >gi|148544447|ref|YP_001271817.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM 20016] gi|184153811|ref|YP_001842152.1| hypothetical protein LAR_1156 [Lactobacillus reuteri JCM 1112] gi|227363125|ref|ZP_03847260.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus reuteri MM2-3] gi|325682769|ref|ZP_08162285.1| membrane protein OxaA 2 [Lactobacillus reuteri MM4-1A] gi|148531481|gb|ABQ83480.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM 20016] gi|183225155|dbj|BAG25672.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112] gi|227071843|gb|EEI10131.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus reuteri MM2-3] gi|324977119|gb|EGC14070.1| membrane protein OxaA 2 [Lactobacillus reuteri MM4-1A] Length = 316 Score = 149 bits (375), Expect = 2e-33, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 34/255 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G+ Y ++AKPM LM + + +GN +G AI++ V V+ + P+ Q M Sbjct: 32 YGFVYDYMAKPMQHLMEWLASHMGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKM 91 Query: 390 KNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +QP I EL EK K + Q + M+ LY+ +NI+ G C P+L+Q+P+F A+ Sbjct: 92 SKVQPLIKELTEKQKAAKTPEEQAAVSQQMMALYRDNNISLTGGIGCLPLLIQLPIFAAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S ++ HA F+G + P+ I + + + ++ + P Sbjct: 152 YAAIRYSPDLYHATFFG----IPLGKPSIILAVLSFIAYAAQSYLGLVGVP--------- 198 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K + P + F + AGL +Y+ + +I+Q ++ Sbjct: 199 ------EAQKKQMKAAIWMSPFMTFFISITSSAGLGLYFFIGGLFAILQTLMVN---AYR 249 Query: 564 IGLIDRLRSTFSKNY 578 + ++ KN Sbjct: 250 PRIRRQIEEESKKNP 264 >gi|227543950|ref|ZP_03973999.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus reuteri CF48-3A] gi|300909700|ref|ZP_07127161.1| membrane protein OxaA 2 [Lactobacillus reuteri SD2112] gi|68160786|gb|AAY86839.1| lr0974 [Lactobacillus reuteri] gi|227186066|gb|EEI66137.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus reuteri CF48-3A] gi|300893565|gb|EFK86924.1| membrane protein OxaA 2 [Lactobacillus reuteri SD2112] Length = 316 Score = 149 bits (375), Expect = 2e-33, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 34/255 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G+ Y ++AKPM LM + + +GN +G AI++ V V+ + P+ Q M Sbjct: 32 YGFVYDYMAKPMQHLMEWLASHMGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKM 91 Query: 390 KNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +QP I EL EK K + Q + M+ LY+ +NI+ G C P+L+Q+P+F A+ Sbjct: 92 SKVQPLIKELTEKQKAAKTPEEQAAVSQQMMALYRDNNISLTGGIGCLPLLIQLPIFAAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S ++ HA F+G + P+ I + + + ++ + P Sbjct: 152 YAAIRYSPDLYHATFFG----IPLGKPSIILAVLSFIAYAAQSYLGLVGVP--------- 198 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K + P + F + AGL +Y+ + +I+Q ++ Sbjct: 199 ------EAQKKQMKAAIWMSPFMTFFISITSSAGLGLYFFIGGLFAILQTLMVN---AYR 249 Query: 564 IGLIDRLRSTFSKNY 578 + ++ KN Sbjct: 250 PRIRRQIEEESKKNP 264 >gi|125575428|gb|EAZ16712.1| hypothetical protein OsJ_32188 [Oryza sativa Japonica Group] Length = 413 Score = 149 bits (375), Expect = 2e-33, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 93/226 (41%), Gaps = 20/226 (8%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +F + ++ Y + G N+ I L TV ++ PL Q +T + I+P+++ Sbjct: 122 FFPVAALQHVIDYIHTFTGLNWWACIALATVLIRSATVPLLVNQLKATQKLNAIRPEMEA 181 Query: 399 LREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--- 452 ++E+ P+ ++ M L++ H ++P +L+Q P+F + + I ++ Sbjct: 182 IKEEMNAMDPKSAKEGKAKMTALFQKHGVSPFTPLKGLLIQGPIFMSFFFAIRNMIDKVP 241 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 W DL DP I + L F ++++ + +Q M P Sbjct: 242 SMKGGGSLWFTDLTTPDPLYILPVLTALIF-------------LVTVELNLQEGMEGNPM 288 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + M V+ V SF G+ YW SN+ ++ VI + Sbjct: 289 ARKMKNFSRGMAVLTVPFTMSFAKGIFCYWITSNLFTLTYGFVIRR 334 >gi|293366055|ref|ZP_06612743.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|291319778|gb|EFE60136.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] Length = 305 Score = 149 bits (375), Expect = 2e-33, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 115/260 (44%), Gaps = 35/260 (13%) Query: 335 DWGWFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----AN 388 D +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ Sbjct: 44 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 103 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 104 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 163 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F + Sbjct: 164 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF----------------I 205 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IM 557 + K P + M++ P++ ++ + L +YWS S + ++Q I Sbjct: 206 QAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANIY 265 Query: 558 KMHGAEIGLIDRLRSTFSKN 577 A+ + + ++ Sbjct: 266 YSKLAKKEVQPFIEKYEREH 285 >gi|32307520|gb|AAP79165.1| plastid membrane protein albino 3 [Bigelowiella natans] Length = 440 Score = 149 bits (375), Expect = 2e-33, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 118/253 (46%), Gaps = 14/253 (5%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +G F + + MS VG + G++I+L TVFVKLL FPL ++Q T M I Sbjct: 126 FGQFVKLIAGTILFMSNSLQKVGVEQSIGLSIVLFTVFVKLLTFPLNEQQIKGTERMGII 185 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL- 451 QPKI E++ K+K P + + + +Y + +NPLAG P QIP+F A+Y+ + Sbjct: 186 QPKIKEIQAKYKDDPNKSA-EKLQSVYAENQVNPLAGLLPAFAQIPIFIALYRALQNLAT 244 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP----GFMHVGIW---PIIMSLSMFIQ 504 + + + W+ +L I T + F+ G+ + PI + S + Sbjct: 245 DGQMNQPFLWLPNLEGPTFGPIGTNWLFTGFHDGVPQYGWHDTAAYLSLPIFLIFSQIVS 304 Query: 505 MK-MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + Q ++P++F + + P+GL +YW +N+++ + + + Sbjct: 305 QRLLVSKEQYDAQPQWTKFLPIIFGYFSLNVPSGLAVYWVANNIVTTGTNIALKQKFKND 364 Query: 564 IGLIDRLRSTFSK 576 ++ LR SK Sbjct: 365 PEVVA-LRERISK 376 >gi|312870531|ref|ZP_07730649.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus oris PB013-T2-3] gi|311093928|gb|EFQ52254.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus oris PB013-T2-3] Length = 314 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 38/257 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVS----TANM 389 +G+ Y ++AKPM LM + +GN +G AI++ V V+ + P+ Q M Sbjct: 32 YGFVYDYMAKPMQHLMEWLAAHLGNNYGWAIIVIVVVVRSILLPVMFSQMKKSTITQEKM 91 Query: 390 KNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 ++P I EL EK K + Q + M+ LY+ +NI+ G C P+L+Q+PVF A+ Sbjct: 92 AKVRPLIKELSEKQKAAKTPEEQAAVSQQMMALYRDNNISITGGIGCLPLLIQLPVFAAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S ++ HA F+G +A P+ I + + + ++ + P Sbjct: 152 YAAIRYSPDLYHAEFFG----IALGKPSIILAVLSFIAYAAQSYLGLIGVP--------- 198 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K M + P + F + AGL +Y+ + +I+Q ++ Sbjct: 199 ------EEQKKQMKMAIWMSPFMTFFISLTSSAGLGLYFFIGGLFAILQTLMVN------ 246 Query: 564 IGLIDRLRSTFSKNYNS 580 R+R + + Sbjct: 247 -AYRPRIRKRIEEESKN 262 >gi|323446883|gb|EGB02892.1| hypothetical protein AURANDRAFT_16967 [Aureococcus anophagefferens] Length = 196 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 17/210 (8%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 ++ + +VG++G+AI+L T+ +K + FPL +Q ST M+ +QP I ++ K+ P Q Sbjct: 1 ITLIHGVVGSYGVAIVLFTLLLKAVTFPLNYQQIESTTKMQALQPAIKRIQAKYAADPQQ 60 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAPFWGWIKDLAAA 468 + M +LY+ + +NPLAGC P L+QIP+F A+Y+ ++S++ E + WI +L Sbjct: 61 -MNIMMAELYQENELNPLAGCLPALVQIPIFIALYRSLLSLAKEDLLEESFLWIPNLEGP 119 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVF 527 +L F H + +Q P A + +L ++P++ Sbjct: 120 ------VYGAQNADWLFKFDHAS--------TTLLQPPADPNNEAAQTSNQVLKYLPLMV 165 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 F + PAGL IYW +N+I+ I Sbjct: 166 GFFSLNVPAGLTIYWFCNNIITTASTLYIR 195 >gi|313884144|ref|ZP_07817910.1| membrane protein insertase, YidC/Oxa1 family [Eremococcus coleocola ACS-139-V-Col8] gi|312620591|gb|EFR32014.1| membrane protein insertase, YidC/Oxa1 family [Eremococcus coleocola ACS-139-V-Col8] Length = 314 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 116/257 (45%), Gaps = 30/257 (11%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFP----LAKKQYVSTANMK 390 G+FY +I P + + + G++GIAI++ T+ ++ P + K S A MK Sbjct: 35 GFFYEYIGIPTSHFLDWLAHIFGGSYGIAIIIVTLITRIFMIPSTLKMTKGSMTSAAKMK 94 Query: 391 NIQPKIDELREKF----KQSPPQVLQKAMIQLYKTHNINPL---AGCWPILLQIPVFFAI 443 QP+I+E++ + LQ+ ++ +YK ++IN L +GC P+L+Q+P+ A+ Sbjct: 95 VAQPEINEIQAEIEAATSDQEKMQLQQELMTVYKKYDINMLGGVSGCLPLLIQMPIISAV 154 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S ++++ F G + + + + ++ ++ G++ P Sbjct: 155 YAAIRSSEAIKNSHFLG----INLGERSLGIVIAVVIIGFIQGWLSTKAMPAS------- 203 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P A + ++ P++ + AGL IY+ ++ SI QQ + H + Sbjct: 204 ----DNPQAQQTSKSMMLINPLMIGYITYISAAGLGIYFLVGSIFSIFQQLYMN--HVVK 257 Query: 564 IGLIDRLRSTFSKNYNS 580 + + + + N+ Sbjct: 258 PKVQAEIDAHAERFKNA 274 >gi|207110019|ref|ZP_03244181.1| putative inner membrane protein translocase component YidC [Helicobacter pylori HPKX_438_CA4C1] Length = 136 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 60/131 (45%), Positives = 90/131 (68%), Gaps = 1/131 (0%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS Sbjct: 7 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQ 66 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 67 KLKELAPKMKELQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 125 Query: 448 SISLEMRHAPF 458 ++E++ + + Sbjct: 126 YNAVELKSSEW 136 >gi|94993686|ref|YP_601784.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS10750] gi|94547194|gb|ABF37240.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10750] Length = 307 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + F+ KPM + YF N G +G+AI++ T+ V+ L PL Q + M + Sbjct: 37 IWEFLGKPMSYFIDYFANNAGLGYGLAIIIVTIIVRTLILPLGLYQSWKASYQSEKMTFL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 97 KPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G DL + + + L F+ ++ M Sbjct: 157 AQYTKGVSTSTFMGI--DLGSR-SLVLTAIIAALYFF----------------QSWLSMM 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + ++ MP++ +F S PAG+ +YW SI+QQ + + + L Sbjct: 198 AVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFFSIIQQLITT--YLLKPRL 255 Query: 567 IDRLRSTFSKNY 578 +++ ++K Sbjct: 256 HKQIKEEYAKTP 267 >gi|296395443|ref|YP_003660327.1| YidC/Oxa1 familymembrane protein insertase [Segniliparus rotundus DSM 44985] gi|296182590|gb|ADG99496.1| membrane protein insertase, YidC/Oxa1 family [Segniliparus rotundus DSM 44985] Length = 320 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 114/298 (38%), Gaps = 58/298 (19%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F+ P+ ++ ++ + + ++++ ++ L + A +Q M Sbjct: 2 LDFVYYPVSGVLWVWHWVFSQVLGPKSGFAWALSVVALVCTIRALLYAPAVRQIRFMRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ ++ K+ + Q M +L + H NPL GC P+LLQIPVF +Y V+S Sbjct: 62 QELQPQMKAIQAKYGKD-RQRQALEMQKLQQEHGFNPLLGCLPMLLQIPVFIGLYHVLSS 120 Query: 450 SLEMRHAPFWG-------------------------------------WIKDLAAADPTN 472 A F G +I + AA+ Sbjct: 121 FNRTAGAFFSGGGSLTPEQNRNTSNYVFSPADVQSFLESRFFGVPLSSYILEPAASFDAF 180 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSPPPAD---KGQAMILNWM---- 523 I + + II S++ + + +S PAD + QA ++ M Sbjct: 181 IRAGSAVEFQRWQIALVAVPLMIIASVATHMNSRASLSRQPADVAEQPQAAMMRVMSLWV 240 Query: 524 -PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 P+ + + P L++YW +N + QQ ++ + E +L++ + N+ Sbjct: 241 FPLGVLIFGWASPIALLLYWVSNNAWTYGQQHLVFRKIDQEDE-EKKLQAIQRRAANA 297 >gi|328956378|ref|YP_004373711.1| membrane protein insertase, YidC/Oxa1 family [Coriobacterium glomerans PW2] gi|328456702|gb|AEB07896.1| membrane protein insertase, YidC/Oxa1 family [Coriobacterium glomerans PW2] Length = 260 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 116/239 (48%), Gaps = 9/239 (3%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + +I +F ++ + +L G++G+++++ T+ V+L+ P+ K STA M+ QPK++E Sbjct: 2 WDWIVNILFQILKFIQSLAGDWGLSVIILTLIVRLVLAPVLLKSTKSTARMQVYQPKMEE 61 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA-- 456 +++K+ P Q Q+ + + Y ++ NPL GC P+LLQ+P+ A++ ++ Sbjct: 62 IKQKYADDP-QRQQQEIQKFYAENHFNPLGGCMPLLLQMPIMIALFTLLKSLPTYFPDFD 120 Query: 457 ----PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 F+ + DL + P+ F G P + + ++ ++ + K Sbjct: 121 KGSFSFYNLLPDLTTS-PSASFAQGGA-SGAAPYLVILVLFGLLSLIPQLYMAKNQTGSQ 178 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 + M+ M VV ++ + PAG+++Y+ S+ VQQ + + + R Sbjct: 179 AQSMKMMSVVMAVVMLWFGWALPAGVLLYYDVSSAWQTVQQIFVTQKILERTKAEEEQR 237 >gi|167755168|ref|ZP_02427295.1| hypothetical protein CLORAM_00673 [Clostridium ramosum DSM 1402] gi|237733408|ref|ZP_04563889.1| membrane protein [Mollicutes bacterium D7] gi|167705218|gb|EDS19797.1| hypothetical protein CLORAM_00673 [Clostridium ramosum DSM 1402] gi|229383443|gb|EEO33534.1| membrane protein [Coprobacillus sp. D7] Length = 298 Score = 148 bits (374), Expect = 3e-33, Method: Composition-based stats. Identities = 56/240 (23%), Positives = 110/240 (45%), Gaps = 13/240 (5%) Query: 334 IDWGWFYFI-AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 D GWF FI P+ + + + VGN ++ T+ V ++ P+ K VST M+ + Sbjct: 50 FDAGWFDFIFVIPLAKGILFINDYVGNVAFGVIGVTIIVNIITLPIMIKSTVSTQKMQLL 109 Query: 393 QPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 QP++++++ K+K Q Q + LYK +N++ G + L +P+ FA+++ + Sbjct: 110 QPEMEKIQRKYKGRKDQASQMRQNAEIQNLYKKNNVSMF-GSFATFLTLPIMFAMWQAVQ 168 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI---QM 505 + +G +L A ++I L + + + + G M ++ + Sbjct: 169 RIDILYSTYIFGI--NLGAKPISHIMDL--DIAYIVLLVLVAGTQFFAMQITQIMAKRSP 224 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 K P K + N M + V+ ++ PA + +YW +NVI+I++ I H + Sbjct: 225 KYRPSQQMKSMNTMNNVMTIFIVYLAATMPAAMSLYWITTNVINIIRTVYIQLFHIEKAK 284 >gi|251812194|ref|ZP_04826667.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis BCM-HMP0060] gi|251804291|gb|EES56948.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis BCM-HMP0060] Length = 305 Score = 148 bits (374), Expect = 3e-33, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 116/263 (44%), Gaps = 35/263 (13%) Query: 335 DWGWFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----AN 388 D +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ Sbjct: 44 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 103 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 104 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 163 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F + Sbjct: 164 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF----------------I 205 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IM 557 + K P + M++ P++ ++ + L +YWS S + ++Q + Sbjct: 206 QAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANVY 265 Query: 558 KMHGAEIGLIDRLRSTFSKNYNS 580 A+ + + ++ S Sbjct: 266 YSKLAKKEVQPFIEKYEREHNPS 288 >gi|182416735|ref|ZP_02948134.1| membrane protein OxaA [Clostridium butyricum 5521] gi|237669614|ref|ZP_04529592.1| 60 kDa inner membrane insertion protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379392|gb|EDT76887.1| membrane protein OxaA [Clostridium butyricum 5521] gi|237654848|gb|EEP52410.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium butyricum E4 str. BoNT E BL5262] Length = 258 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 31/254 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFG---------IAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F I M + YF+N++ G +AI+ TV V+LL P K ST M Sbjct: 2 FQAIVDFMRNIFDYFHNVIVGMGVTDLGLSYVLAILAFTVAVRLLILPFNIKAAKSTRGM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS- 448 + IQP+I ++++K+K P Q + +++LYK +N++ + GC P LL +P+ A+Y V Sbjct: 62 QKIQPEIKKIQDKYKSDP-QKMNTEVMKLYKDNNVSMVGGCLPTLLPLPILMALYWVFMG 120 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 I+L + WIKD+ A DP I + L YLP ++ K + Sbjct: 121 INLPEGQVASFLWIKDVFAPDPYYILAIVAALSTYLPS---------------YLMTKAT 165 Query: 509 PPPADKGQAMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P +N M + F +F A L++YW N+I VQ + + Sbjct: 166 PQQPGGMSMGTMNLMMAGMMGFMSLNFKAILVLYWIMGNLIQAVQTYFLN----YRPAVK 221 Query: 568 DRLRSTFSKNYNSQ 581 D+++ + N + Sbjct: 222 DKIKQETAVNRQEE 235 >gi|329117705|ref|ZP_08246422.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parauberis NCFD 2020] gi|326908110|gb|EGE55024.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parauberis NCFD 2020] Length = 310 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 102/252 (40%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I KPM + YF N +G FG++I++ T+ V+ + PL Q + M + Sbjct: 37 IWDTIGKPMSYFIDYFANHMGLGFGLSIIIVTIIVRTIILPLGLYQSWKASYQSEKMAYL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P D + ++ K + Q Q ++ K + IN L G C P+L+Q+P F A+Y Sbjct: 97 KPIFDPINQRMKNASTQEEKFAAQSDLMAAQKANGINMLGGMGCLPLLIQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G + GI I+ ++ M+ Sbjct: 157 AMYTKGISTSTFMG-------------------IDLGSRSLALTGIIAILYFFQSWLSMQ 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 ++ MP++ +F S PAG+ +YW SI+QQ + + + L Sbjct: 198 AVAEEQRAQMKTMMYTMPIMMIFMTLSLPAGVGLYWLVGGFFSIIQQLITT--YIIKPKL 255 Query: 567 IDRLRSTFSKNY 578 ++ + N Sbjct: 256 RQKIEEEYKNNP 267 >gi|283782566|ref|YP_003373320.1| membrane protein insertase, YidC/Oxa1 family [Gardnerella vaginalis 409-05] gi|283441507|gb|ADB13973.1| membrane protein insertase, YidC/Oxa1 family [Gardnerella vaginalis 409-05] Length = 337 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 34/254 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-------------NFGIAIMLTTVFVKLLFFPLAKKQ 382 GWFY I P+ LM+ +L ++ +I+ + V FP K Sbjct: 14 LGWFYKILTPVEWLMTQIMSLFHKLLTLLGMNEVGFSWVFSIVFLVLVVHACIFPAFIKS 73 Query: 383 YVSTANMKNIQPKIDELREKF--KQSP--PQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 M+ I PKI ++++K+ K P + +Q+ M++LY+ + NP C P+++Q P Sbjct: 74 IKGMRKMQAIAPKIKKIQQKYKGKNDPASKEAMQREMMKLYQDNKANPAGSCLPMMIQGP 133 Query: 439 VFFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGI------LPFYLPGFMHVG 491 F +I+ +S+ + R D+A A +FG+ + G + + Sbjct: 134 AFMSIWYTLSVIPFIARGKHAALGAFDIATAQQFVKTRVFGVGVADTFMTTAGAGKIVIV 193 Query: 492 IWPIIMSLSMFIQM-----KMSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIY 541 I+ ++M +M+ K PP + +G Q +++ P+++VF+ + P +++Y Sbjct: 194 IFVVLMCAAMWYMQFNNIRKNLPPESKQGSQYTVQKLMMWGFPLIYVFSAFAMPFAMLVY 253 Query: 542 WSWSNVISIVQQAV 555 W +NVI++++ Sbjct: 254 WLVNNVINMLRSIW 267 >gi|213400719|gb|ACJ47008.1| hypothetical protein [Wolbachia endosymbiont of Dirofilaria immitis] Length = 171 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 63/172 (36%), Positives = 99/172 (57%), Gaps = 3/172 (1%) Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275 EG + D L E Y DI K + S +W G +DKYW + IP K + Sbjct: 1 HEGVLGTF-DNKLEEWTYKDIAKKHLIKASTSGKNWFGFADKYWLTAIIPEKPDKINVSI 59 Query: 276 KYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 K+ + + ++QA F + +ILPG SI++ N+ FAGAK+ + +Y+ L IP F+ + Sbjct: 60 KHTNINNIDKFQADFVKSHKSILPGTSISSVNYFFAGAKKLNLLDYYKSALNIPLFDKAV 119 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 D+G YF+ KP+F+L+ YF ++ NFG+AI+ T+ +KLL PL+ + Y+S Sbjct: 120 DFGILYFVTKPVFLLLEYFNFILKNFGLAILALTLVIKLLMLPLSNRSYISM 171 >gi|57867621|ref|YP_189262.1| hypothetical protein SERP1697 [Staphylococcus epidermidis RP62A] gi|81673891|sp|Q5HMD1|OXAA2_STAEQ RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|57638279|gb|AAW55067.1| membrane protein, putative [Staphylococcus epidermidis RP62A] gi|319399577|gb|EFV87832.1| 60Kd inner membrane family protein [Staphylococcus epidermidis FRI909] gi|329726156|gb|EGG62628.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU144] Length = 290 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 116/263 (44%), Gaps = 35/263 (13%) Query: 335 DWGWFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----AN 388 D +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F + Sbjct: 149 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF----------------I 190 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IM 557 + K P + M++ P++ ++ + L +YWS S + ++Q I Sbjct: 191 QAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANIY 250 Query: 558 KMHGAEIGLIDRLRSTFSKNYNS 580 A+ + + ++ S Sbjct: 251 YSKLAKKEVQPFIEKYEREHNPS 273 >gi|320458433|dbj|BAJ69054.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 287 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 97/240 (40%), Gaps = 25/240 (10%) Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYK 420 M + +++ PL Q +T M+ +QP+I ++ K+ + +Q+ ++ L + Sbjct: 1 MCLVLIIRICLLPLFFSQMRATQRMQVLQPQIQRIQRKYAARKDPRSKEAMQREIMALQQ 60 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMR--HAPFWGWIKDLAAAD--PTNIFTL 476 HN NPL C L+Q P+ +++ + +A I + A D ++IF + Sbjct: 61 RHNANPLGSCLLSLIQAPILCSLFYTLQSLPASAAGNAEPLSGIDRVMAGDIESSSIFGV 120 Query: 477 FGILPFYL----PGFMHVGIWPIIMSLSMFIQMKM----------SPPPADKGQAMILNW 522 F + +G+ +M L +F + P + Q + Sbjct: 121 RIADSFGTVVSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQFRTQKLTAFV 180 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK---MHGAEIGLIDRLRSTFSKNYN 579 P ++V + + P G+++YW +N+ + Q ++ G+E G R +N Sbjct: 181 FPAIYVVSGGTLPFGVLLYWLTNNLWNFGQTLCQLRWFPAPGSEAGERKAERDHERENRR 240 >gi|227530490|ref|ZP_03960539.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus vaginalis ATCC 49540] gi|227349595|gb|EEJ39886.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus vaginalis ATCC 49540] Length = 322 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 33/251 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNIQ 393 + ++AKPM LM + + +GN +G AI++ V V+ + P+ Q M IQ Sbjct: 36 YTYLAKPMQHLMEWLASHLGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKMAKIQ 95 Query: 394 PKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P + +L++K +++ Q A M+ +Y+ +N++ G C P+L+Q PVF A+Y I Sbjct: 96 PLLKDLQKKQREAKTPEEQAAVGAQMMAVYRENNVSLTGGIGCLPLLIQFPVFAALYAAI 155 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ HA F G +A P+ +F + + + + ++ + P Sbjct: 156 RYSPDLYHATFMG----IALGKPSILFAILSFVAYAVQSYLGLVGVP------------- 198 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 K M + P + F + AGL +Y+ + +I+Q +I + Sbjct: 199 --EEQKKQMKMAIWMSPFMTFFISLTSSAGLGLYFFIGGLFAILQTLMIN---AYRPRIR 253 Query: 568 DRLRSTFSKNY 578 ++ KN Sbjct: 254 RQIAEENKKNP 264 >gi|19745513|ref|NP_606649.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS8232] gi|50913669|ref|YP_059641.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS10394] gi|94987926|ref|YP_596027.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS9429] gi|94991810|ref|YP_599909.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS2096] gi|306827963|ref|ZP_07461230.1| membrane protein [Streptococcus pyogenes ATCC 10782] gi|38503058|sp|Q8P2D8|OXAA2_STRP8 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|73921526|sp|Q5XDQ5|OXAA2_STRP6 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|19747631|gb|AAL97148.1| hypothetical protein spyM18_0404 [Streptococcus pyogenes MGAS8232] gi|50902743|gb|AAT86458.1| 60 kDa inner membrane protein [Streptococcus pyogenes MGAS10394] gi|94541434|gb|ABF31483.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS9429] gi|94545318|gb|ABF35365.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS2096] gi|304429882|gb|EFM32924.1| membrane protein [Streptococcus pyogenes ATCC 10782] Length = 307 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 32/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + F+ KPM + YF N G +G+AI++ T+ V+ L PL Q + M + Sbjct: 37 IWEFLGKPMSYFIDYFANNAGLGYGLAIIIVTIIVRTLILPLGLYQSWKASYQSEKMTFL 96 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + + ++ KQ+ Q Q ++ + H INPL G C P+L+Q+P F A+Y Sbjct: 97 KPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G DL + + + L F+ ++ M Sbjct: 157 AQYTKGVSTSTFMGI--DLGSR-SLVLTAIIAALYFF----------------QSWLSMM 197 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + ++ MP++ +F S PAG+ +YW SI+QQ + + + L Sbjct: 198 AVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFFSIIQQLITT--YLLKPRL 255 Query: 567 IDRLRSTFSKNY 578 +++ ++K Sbjct: 256 HKQIKEEYAKTP 267 >gi|199597202|ref|ZP_03210634.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001] gi|229552525|ref|ZP_04441250.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus rhamnosus LMS2-1] gi|258508719|ref|YP_003171470.1| preprotein translocase subunit YidC [Lactobacillus rhamnosus GG] gi|258539898|ref|YP_003174397.1| preprotein translocase YidC [Lactobacillus rhamnosus Lc 705] gi|199592006|gb|EDZ00081.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001] gi|229314077|gb|EEN80050.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus rhamnosus LMS2-1] gi|257148646|emb|CAR87619.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus GG] gi|257151574|emb|CAR90546.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus Lc 705] gi|259650025|dbj|BAI42187.1| conserved hypothetical protein [Lactobacillus rhamnosus GG] Length = 330 Score = 147 bits (372), Expect = 3e-33, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 35/260 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVST----A 387 +G FY I P+ LM + VG+ +GIAI++ T+ V+L+ PL +Q + Sbjct: 40 FGTFYKIIGLPLQHLMEWIAGFVGSTSSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQE 99 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNIN--PLAGCWPILLQIPVFF 441 K +QP++ +++ K++ Q A M ++Y + + P GC P+L+Q P+F Sbjct: 100 KQKILQPQLKIVQDAVKRAKTPEQQMAANNYMRKIYSANGTSMIPSMGCLPMLIQFPIFS 159 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y+ I+ S E+ HA F+G + + I T+ LP+ + Sbjct: 160 GLYQAIAYSPEISHATFFG----IQLGHSSFIVTILATLPYIIVS--------------- 200 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 I ++ PP K P++ + AGL +Y+ +I I+QQA++ + Sbjct: 201 LIMLQGVPPEQRKAMQATAFLSPIMTFVFCMMYNAGLGLYFGAGGIILIIQQAIVT--YI 258 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 + RL + +N + Sbjct: 259 VTPNIRKRLDAEMEENPPVE 278 >gi|187934380|ref|YP_001887736.1| inner membrane protein translocase component YidC [Clostridium botulinum B str. Eklund 17B] gi|187722533|gb|ACD23754.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum B str. Eklund 17B] Length = 259 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 27/229 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFG---------IAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F I + M + +Y ++ + N G +AI++ T+ ++L+ PL K ST M Sbjct: 2 FEKIIQFMANIFNYLHDFIVNLGVSDVGLSYVLAILIFTLMIRLIILPLNIKAAKSTQKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ +L+EK+K +P + L + M + YK ++++ GC P LL +P+ A+Y V Sbjct: 62 QAVQPKMKKLQEKYKGNP-EKLNEEMRKFYKENDVSVTGGCLPSLLPLPILMALYYVFFR 120 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 M A + WI DL A D T I + L YLP ++ K +P Sbjct: 121 IEGMNGAS-FLWIADLGAKDKTMILPILAALSTYLPS---------------YLMTKATP 164 Query: 510 PPADKGQA-MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + M ++ F +F + L++YW NVI +Q + Sbjct: 165 MDDSPMNMGTMSLVMALMMGFMSINFKSILVLYWIIGNVIQSIQTYFLN 213 >gi|329735686|gb|EGG71969.1| putative stage III sporulation protein J [Staphylococcus epidermidis VCU028] Length = 293 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 116/263 (44%), Gaps = 35/263 (13%) Query: 335 DWGWFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----AN 388 D +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F + Sbjct: 149 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF----------------I 190 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IM 557 + K P + M++ P++ ++ + L +YWS S + ++Q I Sbjct: 191 QAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANIY 250 Query: 558 KMHGAEIGLIDRLRSTFSKNYNS 580 A+ + + ++ S Sbjct: 251 YSKLAKKEVQPFIEKYEREHNPS 273 >gi|323490539|ref|ZP_08095745.1| membrane protein oxaA [Planococcus donghaensis MPA1U2] gi|323395805|gb|EGA88645.1| membrane protein oxaA [Planococcus donghaensis MPA1U2] Length = 260 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 112/250 (44%), Gaps = 31/250 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMKNI 392 ++ KP + ++Y +L G ++G+AI++ T+ ++L+ P + Y M + Sbjct: 31 FYTVFVKPFDVSLNYLGDLFGGSYGLAIVVITIIIRLVLMPFMLRTYKRQQGMKVKMDAM 90 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVI 447 +P++++++++ K++ + LQ+ M+ LYK H +NPL GC P+++Q+P+ +Y I Sbjct: 91 RPEMEDIQKRLKETKDKEEQMKLQQEMMGLYKKHEVNPLNMGCLPVVIQMPIIMGLYFAI 150 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ A + W + P I TL ++ + + Sbjct: 151 LHSPDV-QAHEFLWF---SLGSPDIIMTLIAGAVYFFQAKVSLWT--------------- 191 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P K + + P++ +F + A L +YW+ ++ I+Q + K + Sbjct: 192 MPEQQQKQMKLFIYISPIMIMFISFTSMAALPVYWTVGGILLIIQTFIGRKFYSNHPE-- 249 Query: 568 DRLRSTFSKN 577 L S K Sbjct: 250 KALESVEEKK 259 >gi|328464786|gb|EGF36101.1| hypothetical protein AAULH_09168 [Lactobacillus helveticus MTCC 5463] Length = 320 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 34/237 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQY----VSTA 387 +GW Y ++ +P+ +M + ++VG + G I++ TV V+L+ PL Q Sbjct: 39 YGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQS-----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + I T+F ++ Y+ Sbjct: 159 WGIYQAVFYSPQLAHSTFFGISLSQKSVVLAIIATIFTVIQGYISLIGI----------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P K ++ + P++ +F SF L +YW+ N++ I+QQ ++ Sbjct: 208 --------PEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLVMIIQQVIVT 256 >gi|226309516|ref|YP_002769478.1| OxaA family protein [Rhodococcus erythropolis PR4] gi|226188635|dbj|BAH36739.1| putative OxaA family protein [Rhodococcus erythropolis PR4] Length = 368 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 104/296 (35%), Gaps = 56/296 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ ++ + G + ++++ ++ + + KQ +T M Sbjct: 2 LNFIYYPVSAILWVWHKVFGFILGPDNGIAWALSVVFLVFTLRAVLYKPFVKQVRTTRQM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L++K+ Q M +L K H NP+ GC P+L Q PVF ++ V+ Sbjct: 62 QELQPQIKALQKKYSGD-RQRQAVEMQKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVLRS 120 Query: 450 S-----------------------------------LEMRHAPFWGWIKDLAAADPTNIF 474 + AP I A + Sbjct: 121 FNRTGTGMGQLGMSAEDNLNTPNYVFSATDVQSFLDARLFGAPISAAITTPVAQLQAYVT 180 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS----------PPPADKGQAMILNWMP 524 LP L + II S++ + S P + + L P Sbjct: 181 ENVPELPSRLNIILVAAPLMIIASIATHFNSRASVARQSEAAAANPQSAIMNKLALYVFP 240 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 + + P +++YW +N+ + QQ ++ + AE + + +N N+ Sbjct: 241 LGVLVGGPFLPIAILLYWVSNNIWTYGQQHLVFRKIDAEEE-AKKQEAITRRNDNA 295 >gi|27468607|ref|NP_765244.1| lipoprotein precursor [Staphylococcus epidermidis ATCC 12228] gi|38502988|sp|Q8CMK8|OXAA2_STAES RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|27316154|gb|AAO05288.1|AE016749_234 lipoprotein precursor [Staphylococcus epidermidis ATCC 12228] Length = 290 Score = 147 bits (371), Expect = 4e-33, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 115/260 (44%), Gaps = 35/260 (13%) Query: 335 DWGWFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----AN 388 D +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F + Sbjct: 149 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF----------------I 190 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IM 557 + K P + M++ P++ ++ + L +YWS S + ++Q I Sbjct: 191 QAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANIY 250 Query: 558 KMHGAEIGLIDRLRSTFSKN 577 A+ + + ++ Sbjct: 251 YSKLAKKEVQPFIEKYEREH 270 >gi|229491230|ref|ZP_04385058.1| putative membrane protein [Rhodococcus erythropolis SK121] gi|229321968|gb|EEN87761.1| putative membrane protein [Rhodococcus erythropolis SK121] Length = 368 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 104/296 (35%), Gaps = 56/296 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ ++ + G + ++++ ++ + + KQ +T M Sbjct: 2 LNFIYYPVSAILWVWHKVFGFILGPDNGIAWALSVVFLVFTLRAVLYKPFVKQVRTTRQM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L++K+ Q M +L K H NP+ GC P+L Q PVF ++ V+ Sbjct: 62 QELQPQIKALQKKYSGD-RQRQAVEMQKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVLRS 120 Query: 450 S-----------------------------------LEMRHAPFWGWIKDLAAADPTNIF 474 + AP I A + Sbjct: 121 FNRTGTGMGQLGMSAEDNLNTPNYVFSATDVQSFLDARLFGAPISAAITTPVAQLQAYVT 180 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS----------PPPADKGQAMILNWMP 524 LP L + II S++ + S P + + L P Sbjct: 181 ENVPELPSRLNIILVAAPLMIIASIATHFNSRASVARQSEAAAANPQSAIMNKLALYVFP 240 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 + + P +++YW +N+ + QQ ++ + AE + + +N N+ Sbjct: 241 LGVLVGGPFLPIAILLYWVSNNIWTYGQQHLVFRKIDAEEE-AKKQEAITRRNDNA 295 >gi|161507844|ref|YP_001577808.1| hypothetical protein lhv_1585 [Lactobacillus helveticus DPC 4571] gi|160348833|gb|ABX27507.1| hypothetical protein lhv_1585 [Lactobacillus helveticus DPC 4571] Length = 320 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 34/237 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQY----VSTA 387 +GW Y ++ +P+ +M + ++VG + G I++ TV V+L+ PL Q Sbjct: 39 YGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQS-----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + I T+F ++ Y+ Sbjct: 159 WGIYQAVFYSPQLAHSTFFGISLSQKSVVLAIIATIFTVIQGYISLIGI----------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P K ++ + P++ +F SF L +YW+ N++ I+QQ ++ Sbjct: 208 --------PEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLVMIIQQVIVT 256 >gi|260103137|ref|ZP_05753374.1| membrane protein OxaA [Lactobacillus helveticus DSM 20075] gi|260083047|gb|EEW67167.1| membrane protein OxaA [Lactobacillus helveticus DSM 20075] Length = 320 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 34/237 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQY----VSTA 387 +GW Y ++ +P+ +M + ++VG + G I++ TV V+L+ PL Q Sbjct: 39 YGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQS-----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + I T+F ++ Y+ Sbjct: 159 WGIYQAVFYSPQLAHSTFFGISLSQKSVVLAIIATIFTVIQGYISLIGI----------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P K ++ + P++ +F SF L +YW+ N++ I+QQ ++ Sbjct: 208 --------PEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLVMIIQQVIVT 256 >gi|329734155|gb|EGG70473.1| putative stage III sporulation protein J [Staphylococcus epidermidis VCU045] Length = 282 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 115/260 (44%), Gaps = 35/260 (13%) Query: 335 DWGWFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----AN 388 D +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F + Sbjct: 149 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF----------------I 190 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IM 557 + K P + M++ P++ ++ + L +YWS S + ++Q I Sbjct: 191 QAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANIY 250 Query: 558 KMHGAEIGLIDRLRSTFSKN 577 A+ + + ++ Sbjct: 251 YSKLAKKEVQPFIEKYEREH 270 >gi|326503820|dbj|BAK02696.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 421 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 91/226 (40%), Gaps = 20/226 (8%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +F + ++ + G N+ I LTTV ++ PL Q S+ + I+P+++ Sbjct: 130 FFPVAALQHVIDTIHTFTGLNWWACIALTTVLIRTATIPLLVSQLKSSQKLNAIKPEMEA 189 Query: 399 LREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--- 452 +++ + P+ + M L++ H ++P + IL+Q P+F + + I+ +E Sbjct: 190 IKDAMDSTDPKSALEGKYKMTALFQKHGVSPFSPLKGILIQGPMFMSFFFAINNMVEKVP 249 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 W DL DP I + L F + ++ + +Q M Sbjct: 250 SMKGGGVFWFTDLTTPDPLYICPVLAALTF-------------LATVELNLQEGMEGNSM 296 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M ++ V +F G+ YW SN+ S+ V+ + Sbjct: 297 AGKMKTFSRGMALMTVPFTMNFAKGIFCYWITSNLFSLGYGIVMRR 342 >gi|298253034|ref|ZP_06976826.1| preprotein translocase subunit YidC [Gardnerella vaginalis 5-1] gi|297532429|gb|EFH71315.1| preprotein translocase subunit YidC [Gardnerella vaginalis 5-1] Length = 337 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 34/254 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-------------NFGIAIMLTTVFVKLLFFPLAKKQ 382 GWFY I P+ M+ +L ++ +I+ + V FP K Sbjct: 14 LGWFYKILTPVEWFMTQIMSLFHKLLTLLGMNEVGFSWVFSIVFLVLVVHACIFPAFIKS 73 Query: 383 YVSTANMKNIQPKIDELREKF--KQSP--PQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 M+ I PKI ++++K+ K P + +Q+ M++LY+ + NP C P+++Q P Sbjct: 74 IKGMRKMQAIAPKIKKIQQKYKGKNDPASKEAMQREMMKLYQDNKANPAGSCLPMMIQGP 133 Query: 439 VFFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGI------LPFYLPGFMHVG 491 F +I+ +S+ + R D+A A +FG+ + G + + Sbjct: 134 AFMSIWYTLSVIPFIARGKHAALGAFDIATAQQFVKTRVFGVGVADTFMTTAGAGKIVIV 193 Query: 492 IWPIIMSLSMFIQM-----KMSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIY 541 I+ ++M +M+ K PP + +G Q +++ P+++VF+ + P +++Y Sbjct: 194 IFVVLMCAAMWYMQFNNIRKNLPPESKQGSQYTVQKLMMWGFPLIYVFSAFAMPFAMLVY 253 Query: 542 WSWSNVISIVQQAV 555 W +NVI++++ Sbjct: 254 WLVNNVINMLRSIW 267 >gi|251780751|ref|ZP_04823671.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085066|gb|EES50956.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 259 Score = 147 bits (371), Expect = 6e-33, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 27/229 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFG---------IAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F I + M + +Y ++ + N G +AI++ T+ ++LL PL K ST M Sbjct: 2 FEKIIQFMANIFNYLHDFILNLGVSDVGLSYVLAILIFTLMIRLLILPLNIKAAKSTQKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +L+EK+K +P + L + M + YK ++++ GC P LL +P+ A+Y V Sbjct: 62 QAVQPQMKKLQEKYKGNP-EKLNEEMRKFYKENDVSLTGGCLPSLLPLPILMALYYVFFR 120 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 M A + WIKDL A D T I + + YLP ++ K +P Sbjct: 121 IEGMNGAS-FLWIKDLGARDTTMILPILAAISTYLPS---------------YLMTKATP 164 Query: 510 PPADKGQA-MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + M ++ F +F + L++YW NVI +Q + Sbjct: 165 MDDSPMNMGTMSLVMALMMGFMSINFKSILVLYWIIGNVIQTIQTYFLN 213 >gi|148274159|ref|YP_001223720.1| putative inner membrane protein translocase component YidC [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147832089|emb|CAN03062.1| unnamed protein product [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 320 Score = 147 bits (370), Expect = 6e-33, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 113/255 (44%), Gaps = 38/255 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN----------FGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + I + +++ F+ L + ++I+ + V+ P+ +Q + Sbjct: 7 ILWPIKWVIELILVGFHTLWTTLGLDPDNGATWVLSIVGLVLVVRAALIPIFVRQIKNQR 66 Query: 388 NMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 M + P++ ++++K+K Q + + + LYK NPL+ C P+LLQ+P+FF++ Sbjct: 67 RMMEVAPQLKKIQDKYKGKRDQFSREAMSRETMALYKDTGTNPLSSCLPLLLQMPIFFSL 126 Query: 444 YKVISIS----------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 Y V+ + L + + +G L A + I T G + + V Sbjct: 127 YSVLHRAAVEELPGIGLLNAQLSRSFGESSFLGAPLQSAISTANGNVTVIVIATTMV--- 183 Query: 494 PIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 I+MS S FI P K Q ++L +P+VF + +FP G++ YW Sbjct: 184 -ILMSASQFITQLQIMAKNMSEETKASPMFKQQRILLYILPLVFAVSGIAFPLGVMFYWL 242 Query: 544 WSNVISIVQQAVIMK 558 SN ++ QQ ++++ Sbjct: 243 VSNFWTMGQQFLVIR 257 >gi|332523130|ref|ZP_08399382.1| putative stage III sporulation protein J [Streptococcus porcinus str. Jelinkova 176] gi|332314394|gb|EGJ27379.1| putative stage III sporulation protein J [Streptococcus porcinus str. Jelinkova 176] Length = 270 Score = 147 bits (370), Expect = 6e-33, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 99/227 (43%), Gaps = 29/227 (12%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF AK + L + + G+ I+L T+ ++LL PL Q S+ M+++Q Sbjct: 32 GWDQLVYFFAKSVQWL-----SFNRSIGVGIILFTILIRLLLMPLFNIQIKSSQKMQDLQ 86 Query: 394 PKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ +++ K+ L LYK + +NP A +P+++Q+P+ A+++ ++ Sbjct: 87 PELKKIQAKYPGKDSESRMALADETQALYKNNGVNPYASLFPLVIQMPIMIALFQALTRV 146 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 ++ +LA D I + L +L ++ ++ Sbjct: 147 PFLKTGT--FLWAELAQHDHLYILPILAALFTFLSSWL----------------TNLAAK 188 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ MPV+ F +G+++YW SN + Q ++ Sbjct: 189 EKNMVMTVMTYMMPVMIFFMGFKLASGVVLYWVISNAFQVFQLLLLN 235 >gi|293376115|ref|ZP_06622365.1| putative stage III sporulation protein J [Turicibacter sanguinis PC909] gi|325845257|ref|ZP_08168561.1| putative stage III sporulation protein J [Turicibacter sp. HGF1] gi|292645269|gb|EFF63329.1| putative stage III sporulation protein J [Turicibacter sanguinis PC909] gi|325488698|gb|EGC91103.1| putative stage III sporulation protein J [Turicibacter sp. HGF1] Length = 261 Score = 147 bits (370), Expect = 6e-33, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 17/234 (7%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W P+ +++ YN++ N G AI+L T ++L+ PL K S A M+ IQP++ Sbjct: 37 WDKVFVLPLATFITFLYNILSQNLGFAIILATAIIRLILMPLYSKSNKSMAVMQEIQPEM 96 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 ++++K++ Q +Q M+ LYK +N NP+ GC LQ+PVF A Y+ IS Sbjct: 97 QKIQKKYENKKDQASQAKMQTEMMDLYKKYNYNPMMGCILPFLQMPVFLAFYQAISRHP- 155 Query: 453 MRHAPFWGWIKDLAAADPTNI-FTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSP 509 IKD AAA+ I G +P Y+ F+ G+ + M Sbjct: 156 --------LIKDAAAAEFFGINLGATGTMPNYILAFIVAGLTILSQRMMNKNMASSAQQN 207 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ ++ + P P +Y+ +++IVQ + K + Sbjct: 208 QTSNMMMKVMTYYFPFAMFSITIGTPFAFGLYFLTGQIMTIVQYLIFKKPQAKK 261 >gi|282876503|ref|ZP_06285369.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis SK135] gi|281294755|gb|EFA87283.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis SK135] Length = 290 Score = 147 bits (370), Expect = 6e-33, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 116/263 (44%), Gaps = 35/263 (13%) Query: 335 DWGWFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----AN 388 D +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + ++++YK +++NP+ GC PIL+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F + Sbjct: 149 GLYFVLKDKLVNGLSEHPHFLWF-NLTKPD-IWITVIAGVLYF----------------I 190 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IM 557 + K P + M++ P++ ++ + L +YWS S + ++Q + Sbjct: 191 QAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANVY 250 Query: 558 KMHGAEIGLIDRLRSTFSKNYNS 580 A+ + + ++ S Sbjct: 251 YSKLAKKEVQPFIEKYEREHNPS 273 >gi|188588551|ref|YP_001922719.1| putative inner membrane protein translocase component YidC [Clostridium botulinum E3 str. Alaska E43] gi|188498832|gb|ACD51968.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum E3 str. Alaska E43] Length = 259 Score = 147 bits (370), Expect = 6e-33, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 27/229 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFG---------IAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F I + M + +Y ++ + N G +AI++ T+ ++LL PL K ST M Sbjct: 2 FEKIIQFMANIFNYLHDFILNLGVSDVGLSYVLAILIFTLMIRLLILPLNIKAAKSTQKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ +L+EK+K +P + L + M + YK ++++ GC P LL +P+ A+Y V Sbjct: 62 QAVQPQMKKLQEKYKGNP-EKLNEEMRKFYKENDVSLTGGCLPSLLPLPILMALYYVFFR 120 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 M A + WIKDL A D T I + + YLP ++ K +P Sbjct: 121 IEGMNGAS-FLWIKDLGARDTTMILPVLAAISTYLPS---------------YLMTKATP 164 Query: 510 PPADKGQA-MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + M ++ F +F + L++YW NVI +Q + Sbjct: 165 MDDSPMNMGTMSLVMALMMGFMSINFKSILVLYWIIGNVIQTIQTYFLN 213 >gi|326804334|ref|YP_004322152.1| stage III sporulation protein J [Aerococcus urinae ACS-120-V-Col10a] gi|326650548|gb|AEA00731.1| stage III sporulation protein J [Aerococcus urinae ACS-120-V-Col10a] Length = 253 Score = 147 bits (370), Expect = 7e-33, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 107/253 (42%), Gaps = 28/253 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + ++ + + GN +G+ I++ T+ +LL PL Q +T M+ +QP++ Sbjct: 12 WDRYVLYNLSQIIIWLSGVFGNSYGMGIIVFTILARLLLTPLYSLQMKNTEKMQKMQPEL 71 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ Q LQ+ +L + ++ N AGC P+L+Q+P+ A+Y+ IS + + Sbjct: 72 RALQEKYASRDAETQQKLQEETAKLQEKYDTNQFAGCLPLLIQLPILTALYQAISRTEAL 131 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + F +L DP I + + + + +++ Sbjct: 132 TNGHFLWM--ELGKPDPYFILPIIAAVSIWYSTHL----------------SQIASGIKS 173 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM------KMHGAEIGLI 567 + MPV F + + P+ L +Y + +NV +I Q +I + E Sbjct: 174 GSMTAMQYVMPVFIFFVMMNLPSALALYMATANVFTIGQTLLINNPYQKQRARHEEEAKE 233 Query: 568 DRLRSTFSKNYNS 580 L K + Sbjct: 234 KDLERRLEKARRN 246 >gi|323466128|gb|ADX69815.1| Preprotein translocase subunit YidC [Lactobacillus helveticus H10] Length = 324 Score = 147 bits (370), Expect = 7e-33, Method: Composition-based stats. Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 34/237 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQY----VSTA 387 +GW Y ++ +P+ +M + ++VG + G I++ TV V+L+ PL Q Sbjct: 43 YGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQNKSVRQQE 102 Query: 388 NMKNIQPKIDELREKFKQS-----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K L +LY + ++ G C P+++Q+P+ Sbjct: 103 KMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLPLIIQLPIM 162 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + I T+F ++ Y+ Sbjct: 163 WGIYQAVFYSPQLAHSTFFGISLSQKSVVLAIIATIFTVIQGYISLIGI----------- 211 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P K ++ + P++ +F SF L +YW+ N++ I+QQ ++ Sbjct: 212 --------PEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLVMIIQQVIVT 260 >gi|270292097|ref|ZP_06198312.1| SpoIIIJ family protein [Streptococcus sp. M143] gi|270279625|gb|EFA25467.1| SpoIIIJ family protein [Streptococcus sp. M143] Length = 309 Score = 147 bits (370), Expect = 7e-33, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 32/254 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ + I PM + YF N +G FG+ I++ T+ V+L+ PL Q + M Sbjct: 38 GFIWNTIGAPMAEAIKYFANDMGLGFGMGIIIVTIIVRLIILPLGIYQSWKATLHSEKMN 97 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 ++ ++ + + K++ Q Q+A+ K H I+ L GC+PILLQ+P F AIY Sbjct: 98 ALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMLGGVGCFPILLQMPFFSAIY 157 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + + F G + P+ + F + +Y+ + + Sbjct: 158 FAAQHTEGVAGSSFLG----IELGSPSMLLVAFAGILYYIQSLLSLHG------------ 201 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + + ++ P++ V PA + +YW + I+QQ ++ + Sbjct: 202 --VEDEMQREQLKKMIYMSPLMIVIFSLFSPASVTLYWVVGGFMMILQQFIVN--YVVRP 257 Query: 565 GLIDRLRSTFSKNY 578 L ++R + KN Sbjct: 258 KLRQKVREEYEKNP 271 >gi|315303048|ref|ZP_07873756.1| membrane protein OxaA 2 [Listeria ivanovii FSL F6-596] gi|313628583|gb|EFR97008.1| membrane protein OxaA 2 [Listeria ivanovii FSL F6-596] Length = 275 Score = 146 bits (369), Expect = 8e-33, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 32/239 (13%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMK 390 G+F ++ +P + + + VG N+G+AI++TT+ ++ L PL K Q + M Sbjct: 32 GFFSTYLIQPFTSFIMFVASFVGDNYGVAIIITTLLIRALIMPLNLRTAKAQMGMQSKMA 91 Query: 391 NIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 +P+IDE++ + K + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y Sbjct: 92 VAKPEIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYY 151 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ A +L + D M + I ++ L+ + Sbjct: 152 AIRGSSEI--ASHTFLWFNLGSPD------------------MVLAIIAGLVYLAQYFVS 191 Query: 506 KMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + P K Q I+ M P++ +F + P+ L +YW+ + Q + K++ + Sbjct: 192 MIGYSPEQKKQMRIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNK 250 >gi|223995523|ref|XP_002287435.1| chloroplast membrane protein [Thalassiosira pseudonana CCMP1335] gi|220976551|gb|EED94878.1| chloroplast membrane protein [Thalassiosira pseudonana CCMP1335] Length = 407 Score = 146 bits (369), Expect = 8e-33, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 27/234 (11%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G++I L T V+ L P + +Q S+ MK ++P +++EK+ Q +A+ +L+ Sbjct: 90 WGVSIFLFTAGVRALLVPFSIQQSKSSEYMKALKPYQQKIKEKYTDKNMQ--NRAISKLF 147 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAPFWGWIKDLAAA---------- 468 + NPLAGC QIP+F +Y+ V ++ E R + WI L Sbjct: 148 EDAQANPLAGCVTSFAQIPIFLGLYRSVTRLAQEGRLDEPFLWIPSLQGPVTAETNYRGT 207 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ-----------A 517 + + G+ P + + P+++ L M + P D Q Sbjct: 208 EWLTQGWVDGVPPLSWETTLAFCVMPVLLVLGQSFTMNVLQQPDDDSQDEETKKQMESTK 267 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA---EIGLID 568 IL ++P++ F PAGL IYW SN+ ++ Q +I + A E+ L D Sbjct: 268 TILKFLPLMIGFFSLQVPAGLTIYWFTSNLFTVSQSLIIRGYYAANPPEVKLPD 321 >gi|332983465|ref|YP_004464906.1| membrane protein insertase, YidC/Oxa1 family [Mahella australiensis 50-1 BON] gi|332701143|gb|AEE98084.1| membrane protein insertase, YidC/Oxa1 family [Mahella australiensis 50-1 BON] Length = 238 Score = 146 bits (369), Expect = 9e-33, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 110/228 (48%), Gaps = 24/228 (10%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + ++ + +VG++ AI++ T+ ++ + PL Q ST M IQPK+ EL +K+ + Sbjct: 5 LASILEWINGMVGSYAYAIIIFTILIRTVLAPLDIMQRRSTQKMNAIQPKLKELEKKYGK 64 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP------FW 459 Q LQ+ ++LY+ INPL GC P ++Q+ + F ++ VI + P + Sbjct: 65 -DKQKLQQKQMELYQKEKINPLGGCLPAIVQMVLLFMLFAVIRQLVGTPDNPGALVGQSF 123 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK----- 514 WIKD++ D + T G + Y P + ++ ++ MK+S PP Sbjct: 124 LWIKDISLPDAFWVTTKTGEINGYFI-------LPALSGITQYLYMKLSMPPQTSSAQQQ 176 Query: 515 -----GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q + + P+ ++ S++ + +YW SN+ +V+ +I Sbjct: 177 NPMGCSQETMNIFFPLFSLYITSTYASAFALYWVVSNIFQVVEFLIIK 224 >gi|332365176|gb|EGJ42939.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK1059] Length = 271 Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 99/223 (44%), Gaps = 22/223 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G++ + + + + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I Sbjct: 32 GFWEKLVYFFADTIRFL-SFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHI 90 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ + L + +LYK +NP A P+ +Q+PV A+++ ++ M Sbjct: 91 KRLQEKYPGKDMESRTALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTRVDFM 150 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +L A DPT I L L +L ++ P + Sbjct: 151 KTG--HFLWLNLGATDPTFILPLLAALFTFLSTWLSNKALP----------------ERN 192 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 G +++ +PV F +G+ +YW+ SN +VQ ++ Sbjct: 193 GGMTVMMYLLPVAIFFFAFYAASGVALYWAVSNAYQVVQTLLL 235 >gi|146319668|ref|YP_001199380.1| hypothetical protein SSU05_2014 [Streptococcus suis 05ZYH33] gi|146321863|ref|YP_001201574.1| hypothetical protein SSU98_2016 [Streptococcus suis 98HAH33] gi|253752665|ref|YP_003025806.1| membrane protein OxaA 1 precursor [Streptococcus suis SC84] gi|253754491|ref|YP_003027632.1| membrane protein OxaA 1 precursor [Streptococcus suis P1/7] gi|253756424|ref|YP_003029564.1| membrane protein OxaA 1 precursor [Streptococcus suis BM407] gi|166977421|sp|A4W485|OXAA_STRS2 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|145690474|gb|ABP90980.1| conserved hypothetical protein [Streptococcus suis 05ZYH33] gi|145692669|gb|ABP93174.1| conserved hypothetical protein [Streptococcus suis 98HAH33] gi|251816954|emb|CAZ52603.1| membrane protein OxaA 1 precursor [Streptococcus suis SC84] gi|251818888|emb|CAZ56731.1| membrane protein OxaA 1 precursor [Streptococcus suis BM407] gi|251820737|emb|CAR47499.1| membrane protein OxaA 1 precursor [Streptococcus suis P1/7] gi|292559284|gb|ADE32285.1| Hypothetical protein SSGZ1_1829 [Streptococcus suis GZ1] gi|319759082|gb|ADV71024.1| hypothetical protein SSUJS14_1975 [Streptococcus suis JS14] Length = 270 Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 106/256 (41%), Gaps = 37/256 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 ++ LI W F + F ++ G GI I+L T+ ++ L PL + Q S+ M Sbjct: 34 WDRLIYW----------FASIIQFLSINGQIGIGIILFTILIRTLLLPLFQIQMNSSRKM 83 Query: 390 KNIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 + +QP++ +L+ ++ + + Q+ A LYK + ++ A P+ +Q+P+ A+++ Sbjct: 84 QELQPQLKKLQAEYPGTDMESRQQLYEATQALYKENGVSMRASMIPLFIQMPILLALFQA 143 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 ++ ++ +L DP I PI+ ++ F+ Sbjct: 144 LTRVEALKVG--HFLWLNLGEPDPFFIL-------------------PILAAVFTFLSSW 182 Query: 507 MSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ A + ++ MPV+ F + +G+ +YW+ SN + Q V Sbjct: 183 LTNKSAIEKNMAMTIMTYVMPVMIFFFAVAAASGVALYWTVSNAYQVAQTLVFNNPFKII 242 Query: 564 IGLIDRLRSTFSKNYN 579 ++ + + Sbjct: 243 AERQAKIDAEKERQAK 258 >gi|168183723|ref|ZP_02618387.1| membrane protein OxaA [Clostridium botulinum Bf] gi|237797102|ref|YP_002864654.1| putative inner membrane protein translocase component YidC [Clostridium botulinum Ba4 str. 657] gi|182673143|gb|EDT85104.1| membrane protein OxaA [Clostridium botulinum Bf] gi|229260568|gb|ACQ51601.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum Ba4 str. 657] Length = 217 Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats. Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 30/228 (13%) Query: 341 FIAKPMFMLMSYFYNLVGN--------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 ++ + + V N +GIAI+L T+ ++LL PL KQ S+ M + Sbjct: 3 YLNDAFVQFFKFIHGAVSNVISNPNFSYGIAIILVTLIIRLLILPLNIKQTKSSLRMNEL 62 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP+I +L+ K+K P Q L + ++LYK +NPL GC P+L+Q P+F A+Y V + Sbjct: 63 QPEIKKLQAKYKNDP-QRLNQKTMELYKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTG 121 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + + + W+KDLA D + + Y G + SP + Sbjct: 122 I-NGISFLWVKDLAKPD--VVLAVLSGATTYFSGTLMT-----------------SPDNS 161 Query: 513 DKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 GQ +N M + + + L++YW +N+I I+Q ++ KM Sbjct: 162 QAGQMKSMNIGMSIFMIVISWKLKSALVLYWVINNLIQIIQTVIMKKM 209 >gi|170783400|ref|YP_001711734.1| putative inner membrane protein translocase component YidC [Clavibacter michiganensis subsp. sepedonicus] gi|169157970|emb|CAQ03180.1| membrane insertion protein [Clavibacter michiganensis subsp. sepedonicus] Length = 320 Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 113/255 (44%), Gaps = 38/255 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN----------FGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + I + +++ F+ L + ++I+ + V+ P+ +Q + Sbjct: 7 ILWPIKWVIELILVGFHTLWTTLGLDPDNGATWVLSIVGLVLVVRAALIPIFVRQIKNQR 66 Query: 388 NMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 M + P++ ++++K+K Q + + + LYK NPL+ C P+LLQ+P+FF++ Sbjct: 67 RMMEVVPQLKKIQDKYKGKRDQFSREAMSRETMALYKDTGTNPLSSCLPLLLQMPIFFSL 126 Query: 444 YKVISIS----------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 Y V+ + L + + +G L A + I T G + + V Sbjct: 127 YSVLHRAAVEELPGIGLLNEQLSRSFGESSFLGAPLQSAISTANGNITVIVIATTMV--- 183 Query: 494 PIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 I+MS S FI P K Q ++L +P+VF + +FP G++ YW Sbjct: 184 -ILMSASQFITQLQIMAKNMSEETKASPMFKQQRILLYILPLVFAVSGIAFPLGVMFYWL 242 Query: 544 WSNVISIVQQAVIMK 558 SN ++ QQ ++++ Sbjct: 243 VSNFWTMGQQFLVIR 257 >gi|255527590|ref|ZP_05394454.1| 60 kDa inner membrane insertion protein [Clostridium carboxidivorans P7] gi|296186788|ref|ZP_06855189.1| stage III sporulation protein J family protein [Clostridium carboxidivorans P7] gi|255508723|gb|EET85099.1| 60 kDa inner membrane insertion protein [Clostridium carboxidivorans P7] gi|296048502|gb|EFG87935.1| stage III sporulation protein J family protein [Clostridium carboxidivorans P7] Length = 219 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 21/209 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++GIAI+L T+ ++++ PL KQ S+ M +QP+ +++EK+K P Q Q+ M++L Sbjct: 29 SYGIAIILVTLIIRIILLPLNIKQTKSSLVMSELQPETKKIQEKYKNDP-QRAQQEMMKL 87 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +PL+GC P+L+Q P+F A+Y V + + + WI DL D + Sbjct: 88 YKEKGASPLSGCLPMLIQWPIFIALYYVFNNLHGI-DGVHFLWISDLGKRD--IFLAILS 144 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAG 537 L Y G + M MS A Q+ +N M + VF S + Sbjct: 145 GLTTYFSGSL----------------MMMSGDSAQAKQSTTMNVGMSIFMVFISWSLKSA 188 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 L++YW +N I I Q V+ K+ + + Sbjct: 189 LVLYWVVNNSIQIAQTLVMKKVDKNKGNI 217 >gi|293376114|ref|ZP_06622364.1| putative stage III sporulation protein J [Turicibacter sanguinis PC909] gi|292645268|gb|EFF63328.1| putative stage III sporulation protein J [Turicibacter sanguinis PC909] Length = 263 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 11/232 (4%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W P+ +++ YNL+ N G+AI+L T V+L+ PL K ++A M+ IQP++ Sbjct: 37 WDKVFVLPLATFITFLYNLLNQNLGLAIILATAIVRLVLMPLYLKSNKTSAIMQEIQPEM 96 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 ++++K++ Q +Q M+ LYK +N NP+ GC LQ+PVF A Y+ IS Sbjct: 97 QQIQKKYENKTDQASQVKMQTEMMDLYKKYNFNPMMGCILPFLQMPVFLAFYQAISRHPL 156 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 ++ A + L + IL + G +M+ SM Sbjct: 157 IKDA---AASEFLGVNLGATVQLANWILALIVAGISIYSQR--LMNKSMMTNSSAQQNKT 211 Query: 513 DKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ +MP + P +Y+ +V+ I+Q ++ + + Sbjct: 212 SNMMMKVMTYYMPFAMFSITIATPFAFGLYFLTGSVMQIIQFFIVKRSTSNQ 263 >gi|167038671|ref|YP_001666249.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167041021|ref|YP_001664006.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter sp. X514] gi|300913768|ref|ZP_07131085.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter sp. X561] gi|307725546|ref|YP_003905297.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter sp. X513] gi|320117063|ref|YP_004187222.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855261|gb|ABY93670.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter sp. X514] gi|166857505|gb|ABY95913.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|300890453|gb|EFK85598.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter sp. X561] gi|307582607|gb|ADN56006.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter sp. X513] gi|319930154|gb|ADV80839.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 206 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + L+ + ++ VGN+GIAI++ T+ +++L P +Q + MK IQP + EL++ Sbjct: 4 IAVYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMNTMKKMKEIQPLVQELQK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + P Q L ++LY+ +NP GC P+LL + + + ++ ++ A + W Sbjct: 64 KYAKDP-QKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTAS-FLW 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I LA DP I PI+ +++ +I M DK Q + Sbjct: 122 IHSLAQKDPYYII-------------------PILAAVTTYISSAM--VATDKSQNSMNI 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 161 MMSIFMGWITVSLPAGVGIYWVTSNIFQIVQQYIFMR 197 >gi|330684781|gb|EGG96474.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU121] Length = 289 Score = 145 bits (367), Expect = 2e-32, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 117/262 (44%), Gaps = 37/262 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANM 389 G+FY PM L+ + N L ++G+AI++ ++L+ P Y ++ M Sbjct: 30 GFFYNTFVDPMKHLLQWLGNDVLHNDYGLAIIILVFVIRLVLLPFMLSNYKNSHMMREKM 89 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P++D ++EK K++ Q + ++++YK +++NP+ GC P+L+Q+P+ Sbjct: 90 KVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W +L D I + G+L F + Sbjct: 150 LYFVLKDKLVSGLSVHPHFLWF-NLTKPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMK 558 ++ K P + M++ P++ ++ S + L +YWS S +VQ + Sbjct: 192 AYVSSKTMPQEQRQMGYMMMIVSPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANMYY 251 Query: 559 MHGAEIGLIDRLRSTFSKNYNS 580 A+ + L F ++ S Sbjct: 252 SKLAKKEVEPLLEK-FDQDGKS 272 >gi|262204659|ref|YP_003275867.1| membrane protein insertase, YidC/Oxa1 family [Gordonia bronchialis DSM 43247] gi|262088006|gb|ACY23974.1| membrane protein insertase, YidC/Oxa1 family [Gordonia bronchialis DSM 43247] Length = 411 Score = 145 bits (367), Expect = 2e-32, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 108/295 (36%), Gaps = 58/295 (19%) Query: 339 FYFIAKPMFMLMSYFYNLVGN------------FGIAIMLTTVFVKLLFFPLAKKQYVST 386 FI P+ +M ++ L + + ++++ ++ + + KQ +T Sbjct: 2 LNFIYYPVSGIMWVWHWLFDHILPNSPGGDGVAWALSVVFLVFTLRAILYKPFVKQIRTT 61 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ I P++ +R+K+ + + + + M +L K H NPL GC P+LLQIPVF ++ V Sbjct: 62 KKMQEINPELQAIRKKYAKDRVK-MTEEMQKLQKEHGFNPLLGCLPMLLQIPVFIGLFHV 120 Query: 447 IS--------------ISLEMRHAPFWGWIKD----------LAAADPTNIF-TLFGILP 481 + E R+ P + + D + I + Sbjct: 121 LRSFNRTATGMGQLGMSPTETRNTPNYFFSVDQVQNFLDARLFGVPLSSFITQPVTEWQA 180 Query: 482 FYLPG----------FMHVGIWPIIMSLSMFIQMKMS----------PPPADKGQAMILN 521 F PG + V II S++ + + S P + L Sbjct: 181 FVNPGEPIDFTRVQIAIVVVPMMIIASIATHMNSRASVARQPEAALENPQTRMMNMLALY 240 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 P+ + FP +++YW +N+ + QQ ++ E + K Sbjct: 241 IFPLGILVTGPFFPVAILLYWMSNNIWTYGQQHLVFGRIAKEEEEAKLAKQEKLK 295 >gi|170760805|ref|YP_001788987.1| putative inner membrane protein translocase component YidC [Clostridium botulinum A3 str. Loch Maree] gi|169407794|gb|ACA56205.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum A3 str. Loch Maree] Length = 217 Score = 145 bits (367), Expect = 2e-32, Method: Composition-based stats. Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 30/228 (13%) Query: 341 FIAKPMFMLMSYFYNLVGN--------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 ++ + + V N +GIAI+L T+ ++LL PL KQ S+ M + Sbjct: 3 YLNDAFVQFFKFIHGAVSNVISNPNFSYGIAIILVTLIIRLLILPLNIKQTKSSLRMNEL 62 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP+I +L+ K+K P Q L + ++LYK +NPL GC P+L+Q P+F A+Y V + Sbjct: 63 QPEIKKLQAKYKNDP-QKLNQKTMELYKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTG 121 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + + + W+KDLA D + + Y G + SP + Sbjct: 122 I-NGISFLWVKDLAKPD--VVLAVLSGATTYFSGTLMT-----------------SPDNS 161 Query: 513 DKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 GQ +N M + + + L++YW +N+I I+Q ++ KM Sbjct: 162 QAGQMKSMNIGMSIFMIVISWKLKSALVLYWVINNLIQIIQTVIMKKM 209 >gi|256372785|ref|YP_003110609.1| 60 kDa inner membrane insertion protein [Acidimicrobium ferrooxidans DSM 10331] gi|256009369|gb|ACU54936.1| 60 kDa inner membrane insertion protein [Acidimicrobium ferrooxidans DSM 10331] Length = 336 Score = 145 bits (367), Expect = 2e-32, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 29/246 (11%) Query: 342 IAKPMFMLM----SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 I +P+F L+ +++Y ++ ++GIAI L TV V + PL + S M+ IQPK+ Sbjct: 10 IFRPLFELLAGIVTFWYAIIPSYGIAIALLTVTVMVALSPLTIRSTRSMLQMQAIQPKLK 69 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 EL+ ++ + L +A +L+K ++PL GC P+LLQ P+ F +Y VI + Sbjct: 70 ELQRQYGKDRA-GLAEAQQRLFKEEGVSPLGGCLPMLLQFPLLFVMYDVIRGLTHTVTSH 128 Query: 458 FWGWIKDLAAADPTNI----------FTLFGILPFYLPGFMHVGI--------WPIIMSL 499 L + + + GI P +HVG +I Sbjct: 129 HAIVAAPLYISHASKLYKNLVADRGHMDFVGINLALTPLHLHVGFVHALPYYVLVLIAVG 188 Query: 500 SMFIQMKM----SPPPADKGQAMIL--NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++Q++ +P A ++ +L VVF PAG+ +Y+ S + + QQ Sbjct: 189 IQYLQIQQIASKNPTAAAANRSALLTQQLTTVVFGVIYLDVPAGVAVYFLVSGLFRVAQQ 248 Query: 554 AVIMKM 559 V+ + Sbjct: 249 EVMWRR 254 >gi|327468457|gb|EGF13942.1| stage III sporulation protein J [Streptococcus sanguinis SK330] Length = 271 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 99/223 (44%), Gaps = 22/223 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G++ + + + + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I Sbjct: 32 GFWEKLVYFFADTIRFL-SFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHI 90 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ + L + +LYK +NP A P+ +Q+PV A+++ ++ M Sbjct: 91 KRLQEKYPGKDMESRTALAEETQKLYKEMGVNPYASFIPLFIQMPVLLALFQALTRVDFM 150 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +L A DPT I L L +L ++ P + Sbjct: 151 KTG--HFLWLNLGATDPTFILPLLAALFTFLSTWLSNKALP----------------ERN 192 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 G +++ +PV F +G+ +YW+ SN +VQ ++ Sbjct: 193 GGMTVMMYLLPVAIFFFAFYAASGVALYWAVSNAYQVVQTLLL 235 >gi|242040481|ref|XP_002467635.1| hypothetical protein SORBIDRAFT_01g031260 [Sorghum bicolor] gi|241921489|gb|EER94633.1| hypothetical protein SORBIDRAFT_01g031260 [Sorghum bicolor] Length = 420 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 20/220 (9%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + ++ + G N+ I LTT+ ++ PL Q +T ++ I P+++ ++++ Sbjct: 135 LQHIIDAIHTFTGLNWWACIALTTLIIRSATIPLLVNQLKATTKLRAINPEMEAIKDQMN 194 Query: 405 QSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG- 460 P+ Q+ M L+K H ++P +L+Q P+F + Y IS +E + G Sbjct: 195 SMDPKSAQEGQAKMKALFKKHGVSPFTPMKGLLIQGPMFMSFYFAISNMVEKVPSFKGGG 254 Query: 461 --WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 W DL D + + L F ++++ + +Q M P Sbjct: 255 ALWFTDLTTPDSLYVLPVLTGLTF-------------LVTVELNLQEGMEGNPMAGKMKT 301 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M V+ V +F + YW SN+ +++ VI + Sbjct: 302 FSRGMAVLTVPFTMNFAKAIFCYWITSNIFTLLYGIVIRR 341 >gi|259503597|ref|ZP_05746499.1| membrane protein OxaA 2 [Lactobacillus antri DSM 16041] gi|259168421|gb|EEW52916.1| membrane protein OxaA 2 [Lactobacillus antri DSM 16041] Length = 314 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 38/257 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVS----TANM 389 +G+ Y ++AKPM LM + +GN +G AI++ V V+ + P+ Q M Sbjct: 32 YGFVYDYMAKPMQHLMEWLAAHLGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTITQEKM 91 Query: 390 KNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +QP I EL EK K + Q + M+ LY+ +NI+ G C P+L+Q+PVF A+ Sbjct: 92 AKVQPLIKELSEKQKAAQTPEEQAAVSQQMMALYRDNNISITGGIGCLPLLIQLPVFAAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S ++ HA F+G +A P+ + + + + ++ + P Sbjct: 152 YAAIRYSPDLYHAEFFG----IALGKPSILLAVLSFIAYAAQSYLGLVGVP--------- 198 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K M + P + F + AGL +Y+ + +I+Q ++ Sbjct: 199 ------EEQKKQMKMAIWMSPFMTFFISLTSSAGLGLYFFIGGLFAILQTIMVN------ 246 Query: 564 IGLIDRLRSTFSKNYNS 580 R+R + + Sbjct: 247 -AYRPRIRQRIEEESKN 262 >gi|205373230|ref|ZP_03226034.1| membrane protein oxaA precursor [Bacillus coahuilensis m4-4] Length = 253 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 30/243 (12%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMK 390 G+FY P L+ + L GNFG+AI++ T+ ++L+ P K Q M Sbjct: 27 GFFYDTFVFPFAKLLEWLGNTLGGNFGLAIIIITIIIRLVLMPFMLKTFKNQQEMKGKMD 86 Query: 391 NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 ++P++ E+++K K+ + LQ+ M+QLY+ H +NPL GC P+++Q+P+ +Y Sbjct: 87 KLKPEMQEIQKKLKETKDTEEQRKLQQEMMQLYQKHGVNPLNMGCLPLIIQMPILLGLYY 146 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S ++ F + I L + ++ + + Sbjct: 147 AIIGSPDIATHTFLW----FNLGEANIIMALIAGVVYFGQAKVSLIGIA----------- 191 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + +I PV+ + + PA L +YW+ V I Q K + AE Sbjct: 192 ----EEQLQQMKIISYLSPVMILIFSLNAPAALPLYWTVGGVFVIGQTLFAKKYYQAEPT 247 Query: 566 LID 568 L + Sbjct: 248 LNE 250 >gi|309798989|ref|ZP_07693246.1| membrane protein OxaA 2 [Streptococcus infantis SK1302] gi|308117393|gb|EFO54812.1| membrane protein OxaA 2 [Streptococcus infantis SK1302] Length = 308 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 32/254 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ + I PM + YF G FG+ I++ T+ V+LL PL Q + M Sbjct: 35 GFIWNTIGAPMAEAIKYFATDQGLGFGLGIIIVTIIVRLLILPLGIYQSWKATLHSEKMN 94 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++ ++ + + K++ Q Q+A+ K H I+ G C+PIL+Q+P F AIY Sbjct: 95 ALKDVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILIQMPFFSAIY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A + G + P+ I F + +YL + + Sbjct: 155 FAAQHTEGVAQASYLG----IPLGSPSMILVAFAGILYYLQSLLSLHG------------ 198 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + + +L P++ V PA + +YW + I+QQ +I M Sbjct: 199 --VEDETQREQIKKMLYMSPLMIVVFSVFSPASVTLYWVVGGFMMILQQFIINYM--VRP 254 Query: 565 GLIDRLRSTFSKNY 578 L ++R F+KN Sbjct: 255 HLRKKVREEFAKNP 268 >gi|239637384|ref|ZP_04678366.1| putative membrane protein [Staphylococcus warneri L37603] gi|239596984|gb|EEQ79499.1| putative membrane protein [Staphylococcus warneri L37603] Length = 289 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 117/262 (44%), Gaps = 37/262 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANM 389 G+FY PM L+ + N L ++G+AI++ ++L+ P Y ++ M Sbjct: 30 GFFYNTFVDPMKHLLQWLGNDVLHNDYGLAIIILVFVIRLVLLPFMLSNYKNSHMMREKM 89 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P++D ++EK K++ Q + ++++YK +++NP+ GC P+L+Q+P+ Sbjct: 90 KVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W +L D I + G+L F + Sbjct: 150 LYFVLKDKLVNGLSVHPHFLWF-NLTKPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMK 558 ++ K P + M++ P++ ++ S + L +YWS S +VQ + Sbjct: 192 AYVSSKTMPQEQRQMGYMMMIVSPIMIIWIALSSASALGLYWSVSAAFLVVQTHFANMYY 251 Query: 559 MHGAEIGLIDRLRSTFSKNYNS 580 A+ + L F ++ S Sbjct: 252 SKLAKKEVEPLLEK-FDQDGKS 272 >gi|223933965|ref|ZP_03625923.1| 60 kDa inner membrane insertion protein [Streptococcus suis 89/1591] gi|302024559|ref|ZP_07249770.1| membrane protein OxaA 1 precursor [Streptococcus suis 05HAS68] gi|330833639|ref|YP_004402464.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3] gi|223897357|gb|EEF63760.1| 60 kDa inner membrane insertion protein [Streptococcus suis 89/1591] gi|329307862|gb|AEB82278.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3] Length = 270 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 106/256 (41%), Gaps = 37/256 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 ++ LI W F + F ++ G GI I+L T+ ++ L PL + Q S+ M Sbjct: 34 WDRLIYW----------FASIIQFLSINGQIGIGIILFTILIRTLLLPLFQIQMNSSRKM 83 Query: 390 KNIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 + +QP++ +L+ ++ + + Q+ A LYK + ++ A P+ +Q+P+ A+++ Sbjct: 84 QELQPQLKKLQAEYPGTDMESRQQLYEATQALYKENGVSMRASMIPLFIQMPILLALFQA 143 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 ++ ++ +L DP I PI+ ++ F+ Sbjct: 144 LTRVEALKVG--HFLWLNLGEPDPFFIL-------------------PIMAAVFTFLSSW 182 Query: 507 MSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ A + ++ MPV+ F + +G+ +YW+ SN + Q V Sbjct: 183 LTNKSAIEKNMAMTIMTYVMPVMIFFFAVAAASGVALYWTVSNAYQVAQTLVFNNPFKII 242 Query: 564 IGLIDRLRSTFSKNYN 579 ++ + + Sbjct: 243 AERQAKIDAEKERQAK 258 >gi|551760|gb|AAA73145.1| inner membrane protein [Buchnera aphidicola] Length = 273 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 102/292 (34%), Gaps = 37/292 (12%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N+F+ L S ++ AWQ Q++K+ + + + + + Sbjct: 1 MELQRNFFIFAFLFVSFLLWQAWQ-----------------SQSLKKNKKNEETNSFFHL 43 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + ++ +KN L IN+ G ++ +L Y ++S + L + S+ Sbjct: 44 NHKKE---DKNQIIIKNDVLRLVINMYGGDIEEASLLDYKTQLNSPENLKLLETKSDF-- 98 Query: 119 AYFAELDYVSTAN-----NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 Y A+ + N P + N + + F N I + + Sbjct: 99 VYQAQSGLIGKDGLDNSINKIRPLYSAKKNFFELGHNEKELRVPITFIAKNGITYIKNFI 158 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQE--GFIAVLG 225 L Y ++ + N S ++ + G++ + + F +Q G Sbjct: 159 LKPGKYNVEVEYDINNLSNKKLELNIFGQLKQTVKLPKNRDIYSGNFALQTFRGAAYSSS 218 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 D + K+ +I + + W+ + +Y+ ++P S + Sbjct: 219 DAKYEKYKFDNIANHEHLHIITHHGWIAMLQQYFVVAWVPDTNISSSNIIYT 270 >gi|319949435|ref|ZP_08023496.1| putative inner membrane protein translocase component YidC [Dietzia cinnamea P4] gi|319436897|gb|EFV91956.1| putative inner membrane protein translocase component YidC [Dietzia cinnamea P4] Length = 400 Score = 145 bits (365), Expect = 3e-32, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 107/288 (37%), Gaps = 50/288 (17%) Query: 338 WFYF-IAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 WF+ I + L+ + N + ++++ V ++ L F A KQ + M+ +Q Sbjct: 18 WFWHKIFAFLGGLLPWVEAPDSNGVIWALSVIFLVVTLRALLFWPAAKQIRFSRKMQELQ 77 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ EL++++K + L +L K NPL GC P+L+QIPVF ++ V+ M Sbjct: 78 PKMKELQKRYKND-REKLAVETRKLQKQEGFNPLLGCLPMLIQIPVFLGLFHVLRSFNRM 136 Query: 454 ------------------------------RHAPFWGWIKDLAAADPTNIFTLF----GI 479 A +G + P F F Sbjct: 137 GEQFGALGMTAEETRNTGNYVFNADEVQSFLDARLFGAPLSSFISQPVEQFQAFVEPGAA 196 Query: 480 LPFYLPGFMHVG-IWPIIMSLSMFIQ-----MKMSPPPADKGQAMIL-----NWMPVVFV 528 L F + V II +++ + SP A QA I+ P+ + Sbjct: 197 LDFARWNIILVAVPLMIISAVTTHFNARVSLSRQSPEAAANPQAKIMNQLMLWAFPIGIL 256 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + +P +++Y +N+ ++ QQ + + E R K Sbjct: 257 VTGAFWPMAILVYMVTNNLWTLGQQYFLYERMAKEDDAAALARREEQK 304 >gi|238478612|ref|NP_001154364.1| ALB4 (ALBINA 4) [Arabidopsis thaliana] gi|332192419|gb|AEE30540.1| ALBINO3-like protein 1 [Arabidopsis thaliana] Length = 462 Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats. Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 19/213 (8%) Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 MK++ P+I ++E++ + +Q +LYK INPLAGC P L IPV+ +Y+ Sbjct: 113 AMAMKSLTPQIKAIQERYAGD-QEKIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYR 171 Query: 446 VISISL-EMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIW 493 +S E + WI LA + I LF G P P + + Sbjct: 172 ALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFIEGHPPLGWPDTLAYLVL 231 Query: 494 PIIMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 P+++ S ++ Q S PA K + +P++ + S P+GL +YW +N++ Sbjct: 232 PLLLVFSQYLSIQIMQSSQSNDPAMKSSQAVTKLLPLMIGYFALSVPSGLSLYWLTNNIL 291 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 S QQ + K GA+ + ++ + +K +Q Sbjct: 292 STAQQVWLQKYGGAKNPV-EKFTNLVTKEDKTQ 323 >gi|290890426|ref|ZP_06553501.1| hypothetical protein AWRIB429_0891 [Oenococcus oeni AWRIB429] gi|290479822|gb|EFD88471.1| hypothetical protein AWRIB429_0891 [Oenococcus oeni AWRIB429] Length = 344 Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 105/251 (41%), Gaps = 19/251 (7%) Query: 339 FYFIAKPMFMLMSYF----YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 + +I + M M + + G AI+ T ++++ FP+ Q + M Sbjct: 39 WLWIGQYMVAFMHWMANDVFKSTNGIGFAIIAITAVIRIVLFPIMFDQQRKATIQSEKMA 98 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 +QP++ +++ K + Q + AM+ +Y+ +N++ + G +L+Q+P+ ++Y Sbjct: 99 MLQPQLSKVQAAMKTAQTQEEKVAVNTAMMSVYRENNVSMIGGVNFLSMLIQLPIISSLY 158 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I +S + +++ N FGI Y P I I + Sbjct: 159 TAIRLSTSVLKTDHINPAT-YSSSFLLNGSHFFGI-ALYKPSITIAVIAGIFYLAQSWFM 216 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +K +P K ++ + P++ F A L +Y+ ++Q +++K+H Sbjct: 217 LKTTPEAQRKQMQTMIWFTPIMMFFFAIFQSAALGLYFVVGGFFVLIQTLILLKIH---P 273 Query: 565 GLIDRLRSTFS 575 L +++R F Sbjct: 274 KLQEKIRKEFK 284 >gi|327472485|gb|EGF17916.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK408] Length = 271 Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 98/223 (43%), Gaps = 22/223 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G++ + + + + G+ GI I+L T+ ++ + P+ + Q S+ ++ QP I Sbjct: 32 GFWEKLVYFFADTIRFL-SFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEAQPHI 90 Query: 397 DELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ + L + +LYK +NP A P+ +Q+PV A+++ ++ M Sbjct: 91 KRLQEKYPGKDMESRTALAEETQKLYKEMGVNPYASFIPLFIQMPVLLALFQALTRVDFM 150 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + +L A DPT I L L +L ++ P + Sbjct: 151 KTG--HFLWLNLGATDPTFILPLLAALFTFLSTWLSNKALP----------------ERN 192 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 G +++ +PV F +G+ +YW+ SN +VQ ++ Sbjct: 193 GGMTVMMYLLPVAIFFFAFYAASGVALYWAVSNAYQVVQTLLL 235 >gi|257785164|ref|YP_003180381.1| 60 kDa inner membrane insertion protein [Atopobium parvulum DSM 20469] gi|257473671|gb|ACV51790.1| 60 kDa inner membrane insertion protein [Atopobium parvulum DSM 20469] Length = 252 Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats. Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 5/228 (2%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + +I ++ +++ + G++G+A++L T+ ++++ P+ KQ S A M +QPK+ E Sbjct: 2 WDWIVNFLYTVLAGLQSFSGDWGMAVILLTIIIRIILVPMTNKQTASMARMSVVQPKLKE 61 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++E++ P + + M +LY N NPL GC P+LLQ P+F A++ V + Sbjct: 62 IQERYADDPVR-QNEEMRKLYAEINFNPLGGCLPLLLQSPIFIALFTVAKMVPV---DSR 117 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + I A ++IFT+ G + +P + V ++ + LSM + + S Q M Sbjct: 118 FYGILPSIARTTSDIFTVDGFVS-AIPYMIFVLLFGLTTFLSMAVNARTSSGEQRTQQYM 176 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + M ++ ++ + PA +++Y+ S V + QQ +I K L Sbjct: 177 MGGIMTLMMLWFGWTVPAAVLLYYVTSGVWQLAQQQLITKRIMEREKL 224 >gi|183985455|ref|YP_001853746.1| transmembrane protein [Mycobacterium marinum M] gi|183178781|gb|ACC43891.1| conserved transmembrane protein [Mycobacterium marinum M] Length = 371 Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 99/265 (37%), Gaps = 48/265 (18%) Query: 342 IAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + P+ +M +Y L + +++M ++ L + +Q +T M+ + Sbjct: 13 VYYPVSWIMWVWYKLFALVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQMQEL 72 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP+I L++K+ + Q + M +L + H NP+ GC P+L QIPVF +Y V+ Sbjct: 73 QPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRSFNR 131 Query: 453 MRHAP---------------FWGWIKDLAAADPTNIF------------TLFGILPFYLP 485 + D+ N+F L + F P Sbjct: 132 TTGGFGQPHLSVVENRLTGNYVFTPTDVGHFLDANLFGAPIGASMTQRGGLDAFVDFSRP 191 Query: 486 GFMHVG-IWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMPVVFVFALSSF 534 + VG ++ ++ + + S A Q ++ P+ V Sbjct: 192 AVIAVGVPVMVLAGVATYFNSRASVARQSAEAAANPQTAMMNKLALYVFPLGVVVGGPFL 251 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKM 559 P +I+YW +N+ + QQ + M Sbjct: 252 PLAIILYWFSNNIWTFGQQHYVFSM 276 >gi|256617039|ref|ZP_05473885.1| inner membrane protein [Enterococcus faecalis ATCC 4200] gi|307277162|ref|ZP_07558266.1| putative OxaA-like protein [Enterococcus faecalis TX2134] gi|256596566|gb|EEU15742.1| inner membrane protein [Enterococcus faecalis ATCC 4200] gi|306506092|gb|EFM75258.1| putative OxaA-like protein [Enterococcus faecalis TX2134] Length = 310 Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 37/256 (14%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL Q T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ Q + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A F G + P I L + G +I Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQG---------------YIS 196 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M P K +L P++ VF S PAG+ +YW + + +Q A+ I Sbjct: 197 MIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN------I 250 Query: 565 GLIDRLRSTFSKNYNS 580 L R++ + + Sbjct: 251 LLRPRIKKQVQEELKN 266 >gi|322378154|ref|ZP_08052639.1| SpoIIIJ family protein [Streptococcus sp. M334] gi|321280884|gb|EFX57899.1| SpoIIIJ family protein [Streptococcus sp. M334] Length = 276 Score = 144 bits (364), Expect = 4e-32, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 100/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ L P+ + Q V++ M+ QP+I Sbjct: 39 FWSKFVYFFAEIIRFLSFDISIGVGIILFTVLIRTLLLPVFQVQMVASRKMQEAQPRIKA 98 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 99 LREQYPGRDMESRTKLEQEMRKVFKEMGVRHSDSLWPILIQMPVILALFQALSRVDFLKT 158 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L D T + PI+ ++ F+ +S Sbjct: 159 G-HFLWI-NLGGVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 197 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P+G+ +YW+ SN ++Q + Sbjct: 198 NGATTAMMYGIPVLIFVFGVYAPSGVALYWAVSNAYQVLQTYFLN 242 >gi|257421952|ref|ZP_05598942.1| integral membrane protein [Enterococcus faecalis X98] gi|257163776|gb|EEU93736.1| integral membrane protein [Enterococcus faecalis X98] Length = 309 Score = 144 bits (364), Expect = 4e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 37/256 (14%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL Q T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ Q + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A F G + P I L + G +I Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQG---------------YIS 196 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M P K +L P++ VF S PAG+ +YW + + +Q A+ I Sbjct: 197 MIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN------I 250 Query: 565 GLIDRLRSTFSKNYNS 580 L R++ + + Sbjct: 251 LLRPRIKKQVQEELKN 266 >gi|227553936|ref|ZP_03983983.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis HH22] gi|229549423|ref|ZP_04438148.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis ATCC 29200] gi|255972127|ref|ZP_05422713.1| inner membrane protein [Enterococcus faecalis T1] gi|255975194|ref|ZP_05425780.1| inner membrane protein [Enterococcus faecalis T2] gi|256763098|ref|ZP_05503678.1| inner membrane protein [Enterococcus faecalis T3] gi|256853765|ref|ZP_05559130.1| inner membrane protein [Enterococcus faecalis T8] gi|256956682|ref|ZP_05560853.1| inner membrane protein [Enterococcus faecalis DS5] gi|256961301|ref|ZP_05565472.1| inner membrane protein [Enterococcus faecalis Merz96] gi|256963572|ref|ZP_05567743.1| inner membrane protein [Enterococcus faecalis HIP11704] gi|257079637|ref|ZP_05573998.1| inner membrane protein [Enterococcus faecalis JH1] gi|257082017|ref|ZP_05576378.1| inner membrane protein [Enterococcus faecalis E1Sol] gi|257084568|ref|ZP_05578929.1| inner membrane protein [Enterococcus faecalis Fly1] gi|257087436|ref|ZP_05581797.1| inner membrane protein [Enterococcus faecalis D6] gi|257090596|ref|ZP_05584957.1| inner membrane protein [Enterococcus faecalis CH188] gi|257416643|ref|ZP_05593637.1| inner membrane protein [Enterococcus faecalis AR01/DG] gi|257419859|ref|ZP_05596853.1| inner-membrane protein [Enterococcus faecalis T11] gi|293383585|ref|ZP_06629495.1| SpoJ protein [Enterococcus faecalis R712] gi|294780917|ref|ZP_06746271.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis PC1.1] gi|300860707|ref|ZP_07106794.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis TUSoD Ef11] gi|307270839|ref|ZP_07552126.1| putative OxaA-like protein [Enterococcus faecalis TX4248] gi|307271511|ref|ZP_07552783.1| putative OxaA-like protein [Enterococcus faecalis TX0855] gi|307285813|ref|ZP_07565947.1| putative OxaA-like protein [Enterococcus faecalis TX0860] gi|307287716|ref|ZP_07567759.1| putative OxaA-like protein [Enterococcus faecalis TX0109] gi|307290544|ref|ZP_07570456.1| putative OxaA-like protein [Enterococcus faecalis TX0411] gi|312899834|ref|ZP_07759153.1| putative OxaA-like protein [Enterococcus faecalis TX0470] gi|312906136|ref|ZP_07765148.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 512] gi|312909481|ref|ZP_07768336.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 516] gi|312953484|ref|ZP_07772324.1| putative OxaA-like protein [Enterococcus faecalis TX0102] gi|227176922|gb|EEI57894.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis HH22] gi|229305660|gb|EEN71656.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis ATCC 29200] gi|255963145|gb|EET95621.1| inner membrane protein [Enterococcus faecalis T1] gi|255968066|gb|EET98688.1| inner membrane protein [Enterococcus faecalis T2] gi|256684349|gb|EEU24044.1| inner membrane protein [Enterococcus faecalis T3] gi|256710708|gb|EEU25751.1| inner membrane protein [Enterococcus faecalis T8] gi|256947178|gb|EEU63810.1| inner membrane protein [Enterococcus faecalis DS5] gi|256951797|gb|EEU68429.1| inner membrane protein [Enterococcus faecalis Merz96] gi|256954068|gb|EEU70700.1| inner membrane protein [Enterococcus faecalis HIP11704] gi|256987667|gb|EEU74969.1| inner membrane protein [Enterococcus faecalis JH1] gi|256990047|gb|EEU77349.1| inner membrane protein [Enterococcus faecalis E1Sol] gi|256992598|gb|EEU79900.1| inner membrane protein [Enterococcus faecalis Fly1] gi|256995466|gb|EEU82768.1| inner membrane protein [Enterococcus faecalis D6] gi|256999408|gb|EEU85928.1| inner membrane protein [Enterococcus faecalis CH188] gi|257158471|gb|EEU88431.1| inner membrane protein [Enterococcus faecalis ARO1/DG] gi|257161687|gb|EEU91647.1| inner-membrane protein [Enterococcus faecalis T11] gi|291079097|gb|EFE16461.1| SpoJ protein [Enterococcus faecalis R712] gi|294452043|gb|EFG20491.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis PC1.1] gi|300849746|gb|EFK77496.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis TUSoD Ef11] gi|306498399|gb|EFM67904.1| putative OxaA-like protein [Enterococcus faecalis TX0411] gi|306501454|gb|EFM70757.1| putative OxaA-like protein [Enterococcus faecalis TX0109] gi|306502574|gb|EFM71841.1| putative OxaA-like protein [Enterococcus faecalis TX0860] gi|306511783|gb|EFM80781.1| putative OxaA-like protein [Enterococcus faecalis TX0855] gi|306512752|gb|EFM81397.1| putative OxaA-like protein [Enterococcus faecalis TX4248] gi|310627782|gb|EFQ11065.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 512] gi|310628693|gb|EFQ11976.1| putative OxaA-like protein [Enterococcus faecalis TX0102] gi|311290154|gb|EFQ68710.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 516] gi|311293084|gb|EFQ71640.1| putative OxaA-like protein [Enterococcus faecalis TX0470] gi|315025408|gb|EFT37340.1| putative OxaA-like protein [Enterococcus faecalis TX2137] gi|315030217|gb|EFT42149.1| putative OxaA-like protein [Enterococcus faecalis TX4000] gi|315032896|gb|EFT44828.1| putative OxaA-like protein [Enterococcus faecalis TX0017] gi|315035618|gb|EFT47550.1| putative OxaA-like protein [Enterococcus faecalis TX0027] gi|315146680|gb|EFT90696.1| putative OxaA-like protein [Enterococcus faecalis TX4244] gi|315150156|gb|EFT94172.1| putative OxaA-like protein [Enterococcus faecalis TX0012] gi|315152151|gb|EFT96167.1| putative OxaA-like protein [Enterococcus faecalis TX0031] gi|315155338|gb|EFT99354.1| putative OxaA-like protein [Enterococcus faecalis TX0043] gi|315159086|gb|EFU03103.1| putative OxaA-like protein [Enterococcus faecalis TX0312] gi|315161678|gb|EFU05695.1| putative OxaA-like protein [Enterococcus faecalis TX0645] gi|315164815|gb|EFU08832.1| putative OxaA-like protein [Enterococcus faecalis TX1302] gi|315166401|gb|EFU10418.1| putative OxaA-like protein [Enterococcus faecalis TX1341] gi|315170298|gb|EFU14315.1| putative OxaA-like protein [Enterococcus faecalis TX1342] gi|315173668|gb|EFU17685.1| putative OxaA-like protein [Enterococcus faecalis TX1346] gi|315574363|gb|EFU86554.1| putative OxaA-like protein [Enterococcus faecalis TX0309B] gi|315579045|gb|EFU91236.1| putative OxaA-like protein [Enterococcus faecalis TX0630] gi|315580162|gb|EFU92353.1| putative OxaA-like protein [Enterococcus faecalis TX0309A] gi|323481394|gb|ADX80833.1| Oxa1p cytochrome oxidase export family protein [Enterococcus faecalis 62] gi|327535690|gb|AEA94524.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis OG1RF] gi|329572240|gb|EGG53900.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis TX1467] Length = 310 Score = 144 bits (364), Expect = 4e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 37/256 (14%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL Q T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ Q + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A F G + P I L + G +I Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQG---------------YIS 196 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M P K +L P++ VF S PAG+ +YW + + +Q A+ I Sbjct: 197 MIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN------I 250 Query: 565 GLIDRLRSTFSKNYNS 580 L R++ + + Sbjct: 251 LLRPRIKKQVQEELKN 266 >gi|139439861|ref|ZP_01773226.1| Hypothetical protein COLAER_02260 [Collinsella aerofaciens ATCC 25986] gi|133774789|gb|EBA38609.1| Hypothetical protein COLAER_02260 [Collinsella aerofaciens ATCC 25986] Length = 256 Score = 144 bits (364), Expect = 4e-32, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 113/235 (48%), Gaps = 3/235 (1%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + +I +F L+ ++G++I++ V ++LL PL K STA M+ +QPK+ E Sbjct: 2 WDWIVNILFELLKLIQTFAVDWGLSIIILVVIIRLLLTPLMLKSTKSTARMQVLQPKMLE 61 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++E++ P Q + M + Y + NP+AGC P+L+Q+P+ FA++ ++ + + Sbjct: 62 IQERYADDP-QRQAEEMQKFYSENKFNPMAGCLPLLIQMPILFALFTLLRNLPQYFNDGT 120 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + + L T + LP + + ++ ++ + + + M Sbjct: 121 FSFFNILPDLTTTPSASFADGFMVALPALVCLILFAVLTLIPQLYMSRNQTGQQAQSMRM 180 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH--GAEIGLIDRLR 571 + M V+ ++ S P G+++Y+ S+ ++QQ + + A+ +RL+ Sbjct: 181 MAVVMTVMMLWMGWSLPVGVLLYYDVSSAWQVIQQIFVTQKVIDKAKADEEERLK 235 >gi|229545175|ref|ZP_04433900.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis TX1322] gi|229309720|gb|EEN75707.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis TX1322] Length = 310 Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 37/256 (14%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL Q T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ Q + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A F G + P I L + G +I Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQG---------------YIS 196 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M P K +L P++ VF S PAG+ +YW + + +Q A+ I Sbjct: 197 MIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN------I 250 Query: 565 GLIDRLRSTFSKNYNS 580 L R++ + + Sbjct: 251 LLRPRIKKQVQEELKN 266 >gi|269926527|ref|YP_003323150.1| 60 kDa inner membrane insertion protein [Thermobaculum terrenum ATCC BAA-798] gi|269790187|gb|ACZ42328.1| 60 kDa inner membrane insertion protein [Thermobaculum terrenum ATCC BAA-798] Length = 342 Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 30/228 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW I L+ +F L G+ +AI+L T+ +KL+ PL+ ++ + I P I Sbjct: 5 GWNALIQLITDGLL-FFQGLTGSTALAIILFTILIKLILLPLSLPSLRNSRKQQQIAPLI 63 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++ +K + + + LY+ + INP++GC P+L+Q P+F A+++ I + Sbjct: 64 KQIYKKHGKDRA-AISAETMALYQQYGINPMSGCLPLLIQFPIFLALWRAIIHLSTGSNV 122 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP----- 511 WI +LA D P + +L+ ++Q +M+ P Sbjct: 123 GGLLWIDNLARPDHV---------------------LPFLAALAQWLQTRMAMQPKDQII 161 Query: 512 --ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ MP++ +F + AG ++YW S++ S VQQ + Sbjct: 162 DPQQRSMNSMMQIMPLMVIFIGWNIAAGAVLYWFVSSLFSAVQQYFVT 209 >gi|307265440|ref|ZP_07546996.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter wiegelii Rt8.B1] gi|306919554|gb|EFN49772.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter wiegelii Rt8.B1] Length = 206 Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + L+ + ++ VGN+GIAI++ T+ +++L P +Q + MK IQP I+EL++ Sbjct: 4 IAMYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMSTMKKMKEIQPLIEELQK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + P Q L ++LY+ +NP GC P+LL + + + ++ ++ A + W Sbjct: 64 KYAKDP-QKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTAS-FLW 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + LA DP I PI+ +++ +I M DK Q + Sbjct: 122 MHSLAQKDPYYII-------------------PILATVTTYISSAM--VATDKSQNSMNI 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 161 MMSIFMGWVTVSLPAGVGIYWVTSNIFQIVQQYIFMR 197 >gi|169825323|ref|YP_001692934.1| hypothetical protein FMG_1626 [Finegoldia magna ATCC 29328] gi|302380113|ref|ZP_07268586.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna ACS-171-V-Col3] gi|303234455|ref|ZP_07321093.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna BVS033A4] gi|167832128|dbj|BAG09044.1| putative membrane protein [Finegoldia magna ATCC 29328] gi|302312055|gb|EFK94063.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna ACS-171-V-Col3] gi|302494410|gb|EFL54178.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna BVS033A4] Length = 243 Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats. Identities = 63/237 (26%), Positives = 110/237 (46%), Gaps = 17/237 (7%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 FI + + +M + F I+I+L T+ KL+ P+ + +QP++ Sbjct: 11 ILRFIYENISHVMGE-PKSISYFAISILLLTLIYKLITLPVTIHTQKTQEQNALMQPEMK 69 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH-- 455 E++ K+K P Q Q M +LYK +N NPL+GC PI+LQ+ + A+++V+ + Sbjct: 70 EIQRKYKNDP-QTQQLKMQELYKKYNFNPLSGCLPIILQMVLVLALFRVMREPGKYMFDN 128 Query: 456 -------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 A + WI DL DP LFG+ + F + I M + Sbjct: 129 VSKINEIARNFFWIPDLTKPDPV----LFGLP--LINAFTQFLVAKISMPAKSKDKKSNE 182 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P + ++ +MP+ F S + +GLI+YW +SNVI ++ + +I ++ Sbjct: 183 PDQMEMMNKSMIYFMPIFMFFISSKYASGLILYWGFSNVIEVLIRLIIKNKDKKDVA 239 >gi|120407004|ref|YP_956833.1| putative inner membrane protein translocase component YidC [Mycobacterium vanbaalenii PYR-1] gi|119959822|gb|ABM16827.1| 60 kDa inner membrane insertion protein [Mycobacterium vanbaalenii PYR-1] Length = 374 Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 106/279 (37%), Gaps = 55/279 (19%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYN----LVG------------NFGIAIMLTTVFVKLLF 375 M +W I P+ +M +Y L+G + +++M ++ + Sbjct: 1 MSFNWFSLDIIYYPVSAIMWVWYKAFAFLIGLIPGVDGPSNFFAWALSVMFLVFTLRAIL 60 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 + +Q +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L Sbjct: 61 YKPFVRQIRTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLA 119 Query: 436 QIPVFFAIYKVISISLEMRHA---------------PFWGWIKDLAAADPTNIF------ 474 QIPVF +Y V+ + ++ D+ N+F Sbjct: 120 QIPVFLGLYHVLMSFNRTQTGIGRLGLSVEENRSLPNYFFSATDVGHFLDANLFGAPLGA 179 Query: 475 ------TLFGILPFYLPGFMHVGIWPIIM-SLSMFIQM-----KMSPPPADKGQAMIL-- 520 L F + VG+ +IM ++ + + SP A Q ++ Sbjct: 180 TMIQQHGLDAFTEFNRLSVIVVGVPIMIMAGIATYFNSRASVARQSPEAAANPQTAMMNK 239 Query: 521 ---NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P+ V P +I+YW +N+ + QQ + Sbjct: 240 LALYVFPLGVVVGGPFLPLAIILYWFANNIWTFGQQHYV 278 >gi|256751458|ref|ZP_05492336.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter ethanolicus CCSD1] gi|256749677|gb|EEU62703.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter ethanolicus CCSD1] Length = 206 Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + L+ + ++ VGN+GIAI++ T+ +++L P +Q + MK IQP + EL++ Sbjct: 4 IAVYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMNTMKKMKEIQPLVQELQK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + P Q L ++LY+ +NP GC P+LL + + + ++ ++ A + W Sbjct: 64 KYVKDP-QKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTAS-FLW 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I LA DP I PI+ +++ +I M DK Q + Sbjct: 122 IHSLAQKDPYYII-------------------PILAAVTTYISSAM--VATDKSQNSMNI 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 161 MMSIFMGWITVSLPAGVGIYWVTSNIFQIVQQYIFMR 197 >gi|227519877|ref|ZP_03949926.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis TX0104] gi|227072671|gb|EEI10634.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis TX0104] Length = 310 Score = 144 bits (363), Expect = 5e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 37/256 (14%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL Q T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ Q + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQRIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A F G + P I L + G +I Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQG---------------YIS 196 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M P K +L P++ VF S PAG+ +YW + + +Q A+ I Sbjct: 197 MIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN------I 250 Query: 565 GLIDRLRSTFSKNYNS 580 L R++ + + Sbjct: 251 LLRPRIKKQVQEELKN 266 >gi|315144755|gb|EFT88771.1| putative OxaA-like protein [Enterococcus faecalis TX2141] Length = 310 Score = 143 bits (362), Expect = 5e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 37/256 (14%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL Q T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ Q + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQRIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A F G + P I L + G +I Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQG---------------YIS 196 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M P K +L P++ VF S PAG+ +YW + + +Q A+ I Sbjct: 197 MIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN------I 250 Query: 565 GLIDRLRSTFSKNYNS 580 L R++ + + Sbjct: 251 LLRPRIKKQVQEELKN 266 >gi|184155770|ref|YP_001844110.1| hypothetical protein LAF_1294 [Lactobacillus fermentum IFO 3956] gi|260663514|ref|ZP_05864404.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN] gi|183227114|dbj|BAG27630.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] gi|260552055|gb|EEX25108.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN] Length = 303 Score = 143 bits (362), Expect = 5e-32, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 34/255 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G Y ++AKPM LM +F L GN +G AI+ V V+L+ PL Q M Sbjct: 32 YGMVYDYLAKPMQHLMEWFAGLFGNSYGWAIVALVVVVRLILLPLMMSQMKKSTMMQERM 91 Query: 390 KNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +QP++ L+E+ KQ+ Q +AM+ YK +N++ G C P+L+Q+PVF A+ Sbjct: 92 AMLQPQMRALQERQKQAKTPEEQAAASQAMMSFYKDNNVSLTGGIGCLPLLIQLPVFSAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S ++ A F+G L + + + + + + G+ + Sbjct: 152 YFAIRYSPDLAQASFFG----LQLGQRSALLAIMAFVAYLIQGW---------------L 192 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M P K M L P++ +F AGL +Y+ V +I+Q ++ Sbjct: 193 SMLGVPEDQKKQMRMALMMSPIMILFISWQASAGLGLYFFIGGVFAILQTWLVN---IYR 249 Query: 564 IGLIDRLRSTFSKNY 578 + ++ KN Sbjct: 250 PRIRKQIHEEMKKNP 264 >gi|312142024|ref|YP_004009360.1| integral membrane protein [Rhodococcus equi 103S] gi|325677525|ref|ZP_08157189.1| membrane protein OxaA [Rhodococcus equi ATCC 33707] gi|311891363|emb|CBH50684.1| putative integral membrane protein [Rhodococcus equi 103S] gi|325551772|gb|EGD21470.1| membrane protein OxaA [Rhodococcus equi ATCC 33707] Length = 363 Score = 143 bits (362), Expect = 5e-32, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 103/283 (36%), Gaps = 53/283 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ ++ + G + +A+M ++ + + KQ +T M Sbjct: 2 LDFIYYPVSWILWVWHKVFGAVLGPDNGFAWALAVMFLVFTLRAILYKPFVKQVRTTRQM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS- 448 + +QP+I L++K+ + Q + M +L K H NP+ GC P+LLQ PVF ++ V+ Sbjct: 62 QELQPQIKALQKKYSKD-RQRMALEMQKLQKEHGFNPVMGCLPVLLQAPVFIGLFHVLRS 120 Query: 449 -----------------------ISLEMRHAPFWGWIKDLAAADPTNI---------FTL 476 + + + A I F L Sbjct: 121 FNRTGTGMGQLGMTPEQNAAIGNYAFSPDDVQSFLSARLFGAPISAAITTPQAQLEAFGL 180 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMK----------MSPPPADKGQAMILNWMPVV 526 +G +P L +I S++ + + P + + L P+ Sbjct: 181 YGTVPTVLNIAAVAIPLMVIASVATHFNSRASVARQSAAAAANPQSAIMNKLALWVFPLG 240 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + +++YW +N+ + QQ ++ + AE + Sbjct: 241 VLVGGPFLMIAILLYWVSNNIWTYAQQHIVFRRIDAEEAAKKQ 283 >gi|312905127|ref|ZP_07764248.1| putative OxaA-like protein [Enterococcus faecalis TX0635] gi|310631517|gb|EFQ14800.1| putative OxaA-like protein [Enterococcus faecalis TX0635] Length = 310 Score = 143 bits (362), Expect = 5e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 37/256 (14%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL Q T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ Q + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A F G + P I L + G +I Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQG---------------YIS 196 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M P K +L P++ VF S PAG+ +YW + + +Q A+ I Sbjct: 197 MIGIPEEQKKTMKSMLIVPPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN------I 250 Query: 565 GLIDRLRSTFSKNYNS 580 L R++ + + Sbjct: 251 LLRPRIKKQVQEELKN 266 >gi|227515638|ref|ZP_03945687.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus fermentum ATCC 14931] gi|227086068|gb|EEI21380.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus fermentum ATCC 14931] Length = 303 Score = 143 bits (362), Expect = 5e-32, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 34/255 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G Y ++AKPM LM +F L GN +G AI+ V V+L+ PL Q M Sbjct: 32 YGMVYDYLAKPMQHLMEWFAGLFGNSYGWAIVALVVVVRLILLPLMMSQMKKSTMMQERM 91 Query: 390 KNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +QP++ L+E+ K++ Q +AM+ YK +N++ G C P+L+Q+PVF A+ Sbjct: 92 AMLQPQMRALQERQKRAKTPEEQAAASQAMMSFYKDNNVSLTGGIGCLPLLIQLPVFSAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S ++ A F+G L + + + + + + G+ + Sbjct: 152 YFAIRYSPDLAQASFFG----LQLGQRSALLAIMAFVAYLIQGW---------------L 192 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M P K M L P++ +F AGL +Y+ V +I+Q ++ Sbjct: 193 SMLGVPEDQKKQMRMALMMSPIMILFISWQASAGLGLYFFIGGVFAILQTWLVN---IYR 249 Query: 564 IGLIDRLRSTFSKNY 578 + ++ KN Sbjct: 250 PRIRKQIHEEMKKNP 264 >gi|160902082|ref|YP_001567663.1| 60 kDa inner membrane insertion protein [Petrotoga mobilis SJ95] gi|160359726|gb|ABX31340.1| 60 kDa inner membrane insertion protein [Petrotoga mobilis SJ95] Length = 465 Score = 143 bits (362), Expect = 5e-32, Method: Composition-based stats. Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 22/238 (9%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 I + L +G F I + + + GNFG AI+L T+ V + FP+ +Q S Sbjct: 232 IDLMQDLGKFGPFNNIFYWFVNFFWWLFKVTGNFGWAIILFTLIVNAILFPVYGRQKKSM 291 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 MK +QP+++++R+K+K PQ Q+ ++LYK +NP GC L+ +P+ +++V Sbjct: 292 IEMKQLQPELEKIRKKYKN--PQKQQEETLKLYKEKGVNPAGGCLTSLIPLPIMIILWQV 349 Query: 447 ISISLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I + P + DL+ L + I ++MS Sbjct: 350 IYYFEGSYAYNPRFLLWTDLSLG------GFQANFFLLLLAIIASLINALLMS------- 396 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D A M VVF F L P G+ IY+S + VI + V +++ + Sbjct: 397 ------QDARSAWTSVIMSVVFPFILIGLPVGVFIYYSLNTVIQTLLTFVYNRIYNVK 448 >gi|187777370|ref|ZP_02993843.1| hypothetical protein CLOSPO_00926 [Clostridium sporogenes ATCC 15579] gi|187774298|gb|EDU38100.1| hypothetical protein CLOSPO_00926 [Clostridium sporogenes ATCC 15579] Length = 217 Score = 143 bits (362), Expect = 5e-32, Method: Composition-based stats. Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 22/223 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + F A + + N ++GIAI+L T+ ++LL PL KQ S+ M +QP+I Sbjct: 8 FVQFFAFIHAAVSNVISNPNFSYGIAIILVTLIIRLLILPLNIKQTKSSLRMNELQPEIK 67 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+ K+K P Q L + ++LYK +NPL GC P+L+Q P+F A+Y V + + Sbjct: 68 KLQAKYKNDP-QRLNQKTMELYKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTGINGVS 126 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W+KDLA D + L G ++ M S + GQ Sbjct: 127 -FLWVKDLAKPD-VVLAVLSGATTYFSGTLMA------------------SGDSSQAGQM 166 Query: 518 MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +N M + + + L++YW +N+I I+Q ++ KM Sbjct: 167 KSMNIGMSIFMIVISWKLKSALVLYWVINNLIQIIQTVIMKKM 209 >gi|55821782|ref|YP_140224.1| cytochrome oxidase biogenesis (Oxa1) family protein, SpoIIIJ [Streptococcus thermophilus LMG 18311] gi|55823700|ref|YP_142141.1| hypothetical protein str1810 [Streptococcus thermophilus CNRZ1066] gi|116628498|ref|YP_821117.1| preprotein translocase subunit YidC [Streptococcus thermophilus LMD-9] gi|55737767|gb|AAV61409.1| cytochrome oxidase biogenesis (Oxa1) family protein, similar to SpoIIIJ [Streptococcus thermophilus LMG 18311] gi|55739685|gb|AAV63326.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] gi|116101775|gb|ABJ66921.1| Preprotein translocase subunit YidC [Streptococcus thermophilus LMD-9] gi|312279125|gb|ADQ63782.1| Preprotein translocase subunit YidC [Streptococcus thermophilus ND03] Length = 268 Score = 143 bits (362), Expect = 6e-32, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 92/214 (42%), Gaps = 26/214 (12%) Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNIN 425 T+ ++ + PL +Q S+ ++ +QP++ L+ ++ + + L A +LYK H +N Sbjct: 61 FTILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYAQQELYKEHGVN 120 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P A P+++Q P+ A+Y ++ E+R DL DP I Sbjct: 121 PYASFLPLIIQFPILMALYGALTRVPELREGS--FLWVDLGQKDPYFIL----------- 167 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPAD--KGQAMILNWM-PVVFVFALSSFPAGLIIYW 542 PI+ + F+ ++ A +++N M P+ + + +G+ +YW Sbjct: 168 --------PILAAAFTFLSTWLTNKVAKDRSAMLIVMNIMLPIFIFWFGTQISSGVALYW 219 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + SN +VQ V I +RL + + Sbjct: 220 TVSNAFQVVQILVFNNPFKI-IAERNRLEAEEKE 252 >gi|213966247|ref|ZP_03394431.1| preprotein translocase YidC subunit [Corynebacterium amycolatum SK46] gi|213951099|gb|EEB62497.1| preprotein translocase YidC subunit [Corynebacterium amycolatum SK46] Length = 382 Score = 143 bits (362), Expect = 6e-32, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 107/282 (37%), Gaps = 65/282 (23%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F+ P+ ++ +++ G ++ +AI+L V +++L F Q S M Sbjct: 2 LNFVYWPISAILWFWHKASGFLFDPSSGISWVLAIILLVVTIRILLFKPMLNQQRSAIKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS- 448 + + P++ ++EK+K Q AM QL K +NPL GC PIL+Q+PVF ++ V+ Sbjct: 62 QQLAPEMQAIKEKYKND-QQAQALAMRQLQKEMGVNPLGGCLPILVQMPVFIGLFHVLRS 120 Query: 449 -----------------------ISLEMRHAPFWGWIKDLAAA---------DPTNIFTL 476 + + + L A D FT+ Sbjct: 121 FNRTGTSGNALGMSVEQNWNTPNYIFGVDEVRSFLLARVLNAPLSSSVGMGEDQYAAFTV 180 Query: 477 FGILPFYLPGFMHVGIWP--IIMSLSMFIQMKMS--------------------PPPADK 514 G + + + P +I +L+ +MS D Sbjct: 181 PGTPADFTRMDIMIVAIPLIVIAALATHFNARMSVERTRARQEAGLVKRQEGPMGQQMDM 240 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M+L + P++ + + + GL++Y +NV + QQ I Sbjct: 241 MNKMMLWFFPIMILVTGAFWHIGLLVYMVTNNVWTYFQQRYI 282 >gi|153956073|ref|YP_001396838.1| hypothetical protein CKL_3476 [Clostridium kluyveri DSM 555] gi|219856408|ref|YP_002473530.1| hypothetical protein CKR_3065 [Clostridium kluyveri NBRC 12016] gi|146348931|gb|EDK35467.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] gi|219570132|dbj|BAH08116.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 297 Score = 143 bits (362), Expect = 6e-32, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 118/280 (42%), Gaps = 58/280 (20%) Query: 341 FIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FIA P+ L+ + Y + N+G+AI+ TV +K L PL KQY + + + NIQ K+ E Sbjct: 4 FIAFPIGHLLKFIYEHIAFNNYGVAIIELTVIIKTLLLPLYIKQYHAASGISNIQYKVQE 63 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +++K K + + L + +++LYK +N+NP +GC P+L Q+P+ F++Y V+S L+ Sbjct: 64 IQKKHKNNK-EKLNQEIMKLYKENNVNPASGCLPLLFQMPILFSLYYVVSQPLKYMTGKS 122 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGF---------------------------MHVG 491 I+ L P + + + + M++G Sbjct: 123 PAAIQQLFEMIPQGSDRITNMHDLSIINYFSKHLDKLSDVKGMLEKDDLLNMNFLGMNLG 182 Query: 492 IWPII------------------MSLSMFIQMKMSPPP----------ADKGQAMILNWM 523 P + + + +I K S AD Q + Sbjct: 183 SVPNLHFNHIDTNNLLILLIPLLAAATTYISTKYSTNQTVSQTSDKQIADSMQGNMNLIA 242 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 VV F + PAG+ IYW N+ I QQ + K + Sbjct: 243 SVVTGFMAFTLPAGMGIYWITGNIYQIFQQMFMNKFVIKK 282 >gi|148381582|ref|YP_001256123.1| membrane protein OxaA [Clostridium botulinum A str. ATCC 3502] gi|153931466|ref|YP_001385959.1| putative inner membrane protein translocase component YidC [Clostridium botulinum A str. ATCC 19397] gi|153936249|ref|YP_001389366.1| putative inner membrane protein translocase component YidC [Clostridium botulinum A str. Hall] gi|153940502|ref|YP_001393001.1| putative inner membrane protein translocase component YidC [Clostridium botulinum F str. Langeland] gi|168181112|ref|ZP_02615776.1| membrane protein OxaA [Clostridium botulinum NCTC 2916] gi|170756937|ref|YP_001783280.1| putative inner membrane protein translocase component YidC [Clostridium botulinum B1 str. Okra] gi|226951097|ref|YP_002806188.1| membrane protein OxaA [Clostridium botulinum A2 str. Kyoto] gi|148291066|emb|CAL85203.1| membrane protein [Clostridium botulinum A str. ATCC 3502] gi|152927510|gb|ABS33010.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum A str. ATCC 19397] gi|152932163|gb|ABS37662.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum A str. Hall] gi|152936398|gb|ABS41896.1| membrane protein OxaA [Clostridium botulinum F str. Langeland] gi|169122149|gb|ACA45985.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum B1 str. Okra] gi|182668148|gb|EDT80127.1| membrane protein OxaA [Clostridium botulinum NCTC 2916] gi|226842892|gb|ACO85558.1| membrane protein OxaA [Clostridium botulinum A2 str. Kyoto] gi|295320977|gb|ADG01355.1| membrane protein OxaA [Clostridium botulinum F str. 230613] gi|322807969|emb|CBZ05544.1| inner membrane protein translocase component YidC, short form OxaI-like [Clostridium botulinum H04402 065] Length = 217 Score = 143 bits (361), Expect = 6e-32, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 30/228 (13%) Query: 341 FIAKPMFMLMSYFYNLVGN--------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 ++ + + V N +GIAI+L T+ ++LL PL KQ S+ M + Sbjct: 3 YLNDAFVQFFKFIHGAVSNVISNPNFSYGIAIILVTLIIRLLILPLNIKQTKSSLRMNEL 62 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP+I +L+ K+K P Q L + ++LYK +NPL GC P+L+Q P+F A+Y V + Sbjct: 63 QPEIKKLQAKYKNDP-QKLNQKTMELYKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTG 121 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + + + W+KDLA D + + Y G + + + Sbjct: 122 I-NGISFLWVKDLAKPD--VVLAVLSGATTYFSGTLMT-----------------TADSS 161 Query: 513 DKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 GQ +N M + + + L++YW +N+I I+Q ++ KM Sbjct: 162 QAGQMKSMNIGMSIFMIVISWKLKSALVLYWVINNLIQIIQTVIMKKM 209 >gi|299783425|gb|ADJ41423.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus fermentum CECT 5716] Length = 290 Score = 143 bits (361), Expect = 7e-32, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 34/255 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G Y ++AKPM LM +F L GN +G AI+ V V+L+ PL Q M Sbjct: 19 YGMVYDYLAKPMQHLMEWFAGLFGNSYGWAIVALVVVVRLILLPLMMSQMKKSTMMQERM 78 Query: 390 KNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +QP++ L+E+ K++ Q +AM+ YK +N++ G C P+L+Q+PVF A+ Sbjct: 79 AMLQPQMRALQERQKRAKTPEEQAAASQAMMSFYKDNNVSLTGGIGCLPLLIQLPVFSAL 138 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S ++ A F+G L + + + + + + G+ + Sbjct: 139 YFAIRYSPDLAQASFFG----LQLGQRSALLAIMAFVAYLIQGW---------------L 179 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M P K M L P++ +F AGL +Y+ V +I+Q ++ Sbjct: 180 SMLGVPEDQKKQMRMALMMSPIMILFISWQASAGLGLYFFIGGVFAILQTWLVN---IYR 236 Query: 564 IGLIDRLRSTFSKNY 578 + ++ KN Sbjct: 237 PRIRKQIHEEMKKNP 251 >gi|325845290|ref|ZP_08168594.1| putative stage III sporulation protein J [Turicibacter sp. HGF1] gi|325488731|gb|EGC91136.1| putative stage III sporulation protein J [Turicibacter sp. HGF1] Length = 263 Score = 143 bits (361), Expect = 7e-32, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 17/235 (7%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W P+ +++ YNL+ N G+AI+L T V+L+ PL K ++A M+ IQP++ Sbjct: 37 WDKVFVLPLATFITFLYNLLNQNLGLAIILATAIVRLVLMPLYLKSNKTSAIMQEIQPEM 96 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 +++K++ Q +Q M+ LYK +N NP+ GC LQ+PVF A Y+ IS Sbjct: 97 QRIQKKYENKTDQASQVKMQTEMMDLYKKYNFNPMMGCILPFLQMPVFLAFYQAISRHPL 156 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 ++ A A+ L ++ + G+ L M S Sbjct: 157 IKDAA--------ASEFLGVNLGATVQLANWILALIVAGLSIYSQRLMNKSMMTNSSAQQ 208 Query: 513 DKGQAMILNWMPVVFVFALSSF----PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +K M++ M FA+ S P +Y+ +V+ I+Q ++ + + Sbjct: 209 NKTSNMMMKVMTYYMTFAMFSITIATPFAFGLYFLTGSVMQIIQFFIVKRSTSNQ 263 >gi|293336635|ref|NP_001168896.1| hypothetical protein LOC100382702 [Zea mays] gi|223973535|gb|ACN30955.1| unknown [Zea mays] Length = 423 Score = 143 bits (361), Expect = 7e-32, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 95/220 (43%), Gaps = 20/220 (9%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + ++ + G N+ + I LTT +++ PL Q +T ++ I P+++ ++++ Sbjct: 138 LQHIIDAIHTFTGLNWWVCIALTTFIIRIATVPLLVNQLKATTKLRAINPEMEVIKDQMN 197 Query: 405 QSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG- 460 P+ +Q+ M L+K H ++PL +L+Q P+F + + IS +E + G Sbjct: 198 SMDPKSVQEGQAKMKALFKKHGVSPLTPMKGLLIQGPIFMSFFFAISNMVEKVPSFKGGG 257 Query: 461 --WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 W DL D I + L F + ++ + +Q M P Sbjct: 258 TLWFTDLTTPDSLYILPMLTGLTF-------------LATVELNLQEGMEGNPMAGKMKY 304 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + V+ V +F + YW+ SN+ +++ VI + Sbjct: 305 FSRGVAVLTVPFTMNFATAVFCYWTSSNIFTLLYGLVIRR 344 >gi|326390366|ref|ZP_08211925.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter ethanolicus JW 200] gi|325993643|gb|EGD52076.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter ethanolicus JW 200] Length = 206 Score = 143 bits (361), Expect = 7e-32, Method: Composition-based stats. Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + L+ + ++ VGN+GIAI++ T+ +++L P +Q + MK IQP ++EL++ Sbjct: 4 IAMYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMSTMKKMKEIQPLVEELQK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + P Q L ++LY+ +NP GC P+LL + + + ++ ++ A + W Sbjct: 64 KYAKDP-QKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTAS-FLW 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + LA DP I PI+ +++ +I M DK Q + Sbjct: 122 MHSLAQKDPYYII-------------------PILATVTTYISSAM--VATDKSQNSMNI 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 161 MMSIFMGWVTVSLPAGVGIYWVTSNIFQIVQQYIFMR 197 >gi|289579532|ref|YP_003478159.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter italicus Ab9] gi|289529245|gb|ADD03597.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter italicus Ab9] Length = 206 Score = 143 bits (361), Expect = 7e-32, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + L+ + Y VGN+G AI++ T+ +++L P +Q + MK IQP I EL++ Sbjct: 4 IAMYLGELLEFIYKYVGNYGTAIIIFTILIRILLLPFYVQQMNTMKKMKEIQPLIQELQK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + P Q L ++LY+ +NP GC P+LL + + + ++ ++ A + W Sbjct: 64 KYAKDP-QKLNIETMKLYQEKKVNPFGGCLPMLLPLIILWPLFAMLRTYPAFSTAS-FLW 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + LA DP I PI+ +++ +I M DK Q + Sbjct: 122 MHSLAERDPYYII-------------------PILATVTTYISSAM--VATDKSQNSMNI 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 161 IMSIFIGWITVSLPAGIGIYWVTSNIFQIVQQYIFMR 197 >gi|293387301|ref|ZP_06631858.1| SpoJ protein [Enterococcus faecalis S613] gi|291083338|gb|EFE20301.1| SpoJ protein [Enterococcus faecalis S613] Length = 292 Score = 143 bits (361), Expect = 8e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 37/256 (14%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ Y F+ PM ++Y N N+G AI+ T+ V+++ PL Q T M+ Sbjct: 36 GFVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQ 95 Query: 391 NIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 I+P++D + K KQ+ Q + ++YK +N++ + G C P+L+Q+P+F +++ Sbjct: 96 AIKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A F G + P I L + G +I Sbjct: 156 FAARYTKGIATASFLG----MNLGQPNMILVALAGLAYLAQG---------------YIS 196 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M P K +L P++ VF S PAG+ +YW + + +Q A+ I Sbjct: 197 MIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN------I 250 Query: 565 GLIDRLRSTFSKNYNS 580 L R++ + + Sbjct: 251 LLRPRIKKQVQEELKN 266 >gi|256545946|ref|ZP_05473301.1| sporulation associated-membrane protein [Anaerococcus vaginalis ATCC 51170] gi|256398368|gb|EEU11990.1| sporulation associated-membrane protein [Anaerococcus vaginalis ATCC 51170] Length = 252 Score = 143 bits (361), Expect = 8e-32, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 26/258 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGN----------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FIA+ + LM + Y+ + N + I+I+L TV V L+ P+ Q A Sbjct: 2 LSFIAQILGSLMKFIYDSLVNNFTEPSNISFYAISIILMTVLVSLITIPMTMNQQKQAAK 61 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-LAGCWPILLQIPVFFAIYKVI 447 IQPK++E+++K+ P Q++Q+ M QLYK + P ++ C ++ Q+ + ++Y+VI Sbjct: 62 SGEIQPKVEEIKKKYAYDP-QIMQQKMQQLYKEEGVGPGISSCLVMIFQLLILLSLYRVI 120 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI-IMSLSMFIQMK 506 + A +KD PT + L + LP + + + ++ Q + Sbjct: 121 QNPNKFIFAGEMHQVKDNFLWVPT--LSKADPLFYGLPLLTSISQLGVQLFTMKTSPQGQ 178 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ---QAVIMKMHGAE 563 P +L MPV++ F + PAGL +YW+ S++ ++ Q ++ Sbjct: 179 AQNTPGMGSMNNMLLAMPVIYYFVFRNLPAGLPLYWTTSSLARLLILGGQYLV------- 231 Query: 564 IGLIDRLRSTFSKNYNSQ 581 GL R + + NS+ Sbjct: 232 -GLSKRDKEEKDEKINSK 248 >gi|212697392|ref|ZP_03305520.1| hypothetical protein ANHYDRO_01962 [Anaerococcus hydrogenalis DSM 7454] gi|212675584|gb|EEB35191.1| hypothetical protein ANHYDRO_01962 [Anaerococcus hydrogenalis DSM 7454] Length = 252 Score = 143 bits (361), Expect = 8e-32, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 26/258 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGN----------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FIA+ + LM Y+ + N + I+I+L TV V L+ P+ Q A Sbjct: 2 LNFIAQLLGSLMKLIYDSLVNNFTEPSNMSFYAISIILMTVLVSLITIPMTMNQQKQAAK 61 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-LAGCWPILLQIPVFFAIYKVI 447 IQPKI+E+++K+ P Q++Q+ M QLYK + P L+ C ++ Q+ + ++Y+VI Sbjct: 62 SGEIQPKIEEIKKKYAYDP-QIMQQKMQQLYKEEGVGPGLSSCLVMIFQLLILLSLYRVI 120 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI-IMSLSMFIQMK 506 + +KD PT + L + LP + + + ++ Q + Sbjct: 121 QSPDKYIFQGSMHQVKDNFLWVPT--LSKADPLFYGLPLLTSISQLAVQVFTMKTSPQSQ 178 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ---QAVIMKMHGAE 563 P +L MP+++ F + PAGL +YW+ S++ ++ Q +I Sbjct: 179 AQNTPGMGSMNNMLMIMPIIYYFVFRNLPAGLPLYWTTSSLARLIILGGQYLI------- 231 Query: 564 IGLIDRLRSTFSKNYNSQ 581 GL R + ++ NS+ Sbjct: 232 -GLSKRDKEEENEKINSK 248 >gi|328466765|gb|EGF37883.1| OxaA-like protein precursor [Listeria monocytogenes 1816] Length = 275 Score = 143 bits (360), Expect = 8e-32, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 35/260 (13%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMK 390 G+F ++ +P + + VG N+GIAI++TT+ ++ L PL K Q + M Sbjct: 32 GFFSTYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMA 91 Query: 391 NIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 +P+IDE++ + K + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y Sbjct: 92 VAKPEIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYY 151 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ A +L + D M + I ++ L+ + Sbjct: 152 AIRGSSEI--ASHTFLWFNLGSPD------------------MVLAIIAGLVYLAQYFVS 191 Query: 506 KMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH---G 561 + P K Q I+ M P++ +F + P+ L +YW+ + Q + K++ Sbjct: 192 MIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 EI ++++ F + Q Sbjct: 252 PEIKVMEQEEKEFEQIVEEQ 271 >gi|116490952|ref|YP_810496.1| preprotein translocase subunit YidC [Oenococcus oeni PSU-1] gi|118586222|ref|ZP_01543686.1| integral membrane protein [Oenococcus oeni ATCC BAA-1163] gi|116091677|gb|ABJ56831.1| Preprotein translocase subunit YidC [Oenococcus oeni PSU-1] gi|118433338|gb|EAV40040.1| integral membrane protein [Oenococcus oeni ATCC BAA-1163] Length = 344 Score = 143 bits (360), Expect = 9e-32, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 104/251 (41%), Gaps = 19/251 (7%) Query: 339 FYFIAKPMFMLMSYF----YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 + +I + M M + + G AI+ T ++++ FP+ Q + M Sbjct: 39 WLWIGQYMVAFMHWMANDVFKSTNGIGFAIIAITAVIRIVLFPIMFDQQRKATIQSEKMA 98 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 +QP++ +++ K + Q + AM+ +Y+ +N++ + G +L+Q+P+ ++Y Sbjct: 99 MLQPQLSKVQAAMKTAQTQEEKVAVNTAMMSVYRENNVSMIGGVNFLSMLIQLPIISSLY 158 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I +S + +++ N FGI Y P I I + Sbjct: 159 TAIRLSTSVLKTDHINPAT-YSSSFLLNGSHFFGI-ALYKPSITIAVIAGIFYLAQSWFM 216 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +K +P K ++ + P++ F A L +Y+ ++Q +++K+ Sbjct: 217 LKTTPEAQRKQMQTMIWFTPIMMFFFAIFQSAALGLYFVVGGFFVLIQTLILLKI---RP 273 Query: 565 GLIDRLRSTFS 575 L +++R F Sbjct: 274 KLQEKIRKEFK 284 >gi|242042503|ref|XP_002468646.1| hypothetical protein SORBIDRAFT_01g049540 [Sorghum bicolor] gi|241922500|gb|EER95644.1| hypothetical protein SORBIDRAFT_01g049540 [Sorghum bicolor] Length = 449 Score = 143 bits (360), Expect = 9e-32, Method: Composition-based stats. Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 21/220 (9%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + G N+ I LTTV ++L+ PL Q ST + ++P+I+ + E+ + Sbjct: 151 LQHLLDAVQSFTGLNWWATIALTTVMIRLVTVPLLINQMKSTMKLNEMRPEIEAINEEMR 210 Query: 405 QSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE---MRHAP 457 S +V ++ + +L+ H + PL + +Q P+F + + IS +E Sbjct: 211 NSTDPRSMEVGKQKLGELFLRHGVTPLTPLKGLFIQGPIFMSFFFAISNMVEKVPSMKGG 270 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 W DL D I + L F + ++ + +Q M P K Sbjct: 271 GMYWFTDLTTPDNLFILPVLTSLTF-------------LATVELNMQDGMEGNPMAKTMK 317 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + V+FV FP + YW SN+ S+V AV+ Sbjct: 318 KVSRFFGVMFVPFTIGFPKAIFFYWVTSNLFSLVYGAVLR 357 >gi|15828468|ref|NP_302731.1| inner membrane protein translocase component YidC [Mycobacterium leprae TN] gi|221230945|ref|YP_002504361.1| putative inner membrane protein translocase component YidC [Mycobacterium leprae Br4923] gi|38502903|sp|Q50205|OXAA_MYCLE RecName: Full=Membrane protein oxaA gi|13093898|emb|CAC32242.1| putative conserved membrane protein [Mycobacterium leprae] gi|219934052|emb|CAR72810.1| putative conserved membrane protein [Mycobacterium leprae Br4923] Length = 380 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 105/296 (35%), Gaps = 49/296 (16%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQ 382 + D+ + P+ +M +Y L + +++M ++ L + +Q Sbjct: 4 LPFDFVSLDIVYYPVSWIMWVWYKLFAAVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQ 63 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 +T M+ +QP+I L+ K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 64 IRTTRQMQELQPRIRALQRKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLG 122 Query: 443 IYKVISISLEMRHAPFWGWIK---------------DLAAADPTNIF------------T 475 +Y + + D+ N++ Sbjct: 123 LYHALRSFNRTTGGFGQPHMSVTENRMTGNYVFTPVDVGHFLDANLWGAPIGAYMTQRSG 182 Query: 476 LFGILPFYLPGFMHVG-IWPIIMSLSMFIQMKMS----------PPPADKGQAMILNWMP 524 L + F P + VG ++ ++ + + S P + L P Sbjct: 183 LDAFIDFSRPAVILVGIPMMVLAGVATYFNSRASIARQSAEAAENPQTALMNKIALYVFP 242 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 V P +I+YW +N+ + QQ + M E + ++ + N+ Sbjct: 243 FGVVVGGPFLPLAIILYWFSNNIWTFGQQHYVFSMIEKEDE-AKKQKAIERRTANA 297 >gi|325846396|ref|ZP_08169365.1| membrane protein insertase, YidC/Oxa1 family [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481580|gb|EGC84620.1| membrane protein insertase, YidC/Oxa1 family [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 252 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 26/258 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGN----------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FIA+ + LM Y+ + N + I+I+L TV V L+ P+ Q A Sbjct: 2 LNFIAQLLGSLMKLIYDSLVNNFTEPSNMSFYAISIILMTVLVSLITIPMTMNQQKQAAK 61 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-LAGCWPILLQIPVFFAIYKVI 447 IQPKI+E+++K+ P Q++Q+ M QLYK + P L+ C ++ Q+ + ++Y+VI Sbjct: 62 SGEIQPKIEEIKKKYAYDP-QIMQQKMQQLYKEEGVGPGLSSCLVMIFQLLILLSLYRVI 120 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI-IMSLSMFIQMK 506 + +KD PT + L + LP + + + ++ Q + Sbjct: 121 QSPDKYIFQGSMHQVKDNFLWVPT--LSKADPLFYGLPLLTSISQLAVQVFTMKTSPQSQ 178 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ---QAVIMKMHGAE 563 P +L MP+++ F + PAGL +YW+ S++ ++ Q +I Sbjct: 179 AQNTPGMGSMNNMLMIMPIIYYFVFRNLPAGLPLYWTTSSLARLIILGGQYLI------- 231 Query: 564 IGLIDRLRSTFSKNYNSQ 581 GL R + ++ NS+ Sbjct: 232 -GLNKRDKEEENEKINSK 248 >gi|227534826|ref|ZP_03964875.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|301066722|ref|YP_003788745.1| preprotein translocase subunit YidC [Lactobacillus casei str. Zhang] gi|227187582|gb|EEI67649.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|300439129|gb|ADK18895.1| Preprotein translocase subunit YidC [Lactobacillus casei str. Zhang] Length = 332 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 35/257 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVST----A 387 +G FY I P+ LM + +LVG ++GIAI++ T+ V+L+ PL +Q + Sbjct: 41 FGTFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQE 100 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNIN--PLAGCWPILLQIPVFF 441 K IQP++ ++E K++ Q AM ++Y + + P GC P+L+Q+P+F Sbjct: 101 KQKIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFS 160 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y+ I+ S E+ A F+G + I T+ LP+ + Sbjct: 161 GLYQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPYI---------------VVS 201 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 I ++ PP K P++ + AGL +Y+ +I I+QQA++ + Sbjct: 202 LIMLQGVPPEQRKAMQTTAFLNPIMTFVFCMMYNAGLGLYFGAGGIILIIQQAIVT--YV 259 Query: 562 AEIGLIDRLRSTFSKNY 578 + R+ + +N Sbjct: 260 VTPNIRKRMDAEMEENP 276 >gi|16800484|ref|NP_470752.1| OxaA-like protein precursor [Listeria innocua Clip11262] gi|38503124|sp|Q92BX6|OXAA2_LISIN RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|16413889|emb|CAC96647.1| lin1416 [Listeria innocua Clip11262] Length = 275 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 35/260 (13%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMK 390 G+F ++ +P + + VG N+GIAI++TT+ ++ L PL K Q + M Sbjct: 32 GFFSTYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMA 91 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 +P+IDE++ + K++ + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y Sbjct: 92 VAKPEIDEIQARLKRATSKEEQANIQKEMMAVYSKYNINPIQMGCLPLLIQMPILMAFYY 151 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ A +L + D M + I ++ L+ + Sbjct: 152 AIRGSSEI--ASHTFLWFNLGSPD------------------MVLAIIAGLVYLAQYFVS 191 Query: 506 KMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH---G 561 + P K Q I+ M P++ +F + P+ L +YW+ + Q + K++ Sbjct: 192 MIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 EI ++++ F + Q Sbjct: 252 PEIKVMEQEEKEFEQIVEEQ 271 >gi|191638667|ref|YP_001987833.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23] gi|190712969|emb|CAQ66975.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23] gi|327382708|gb|AEA54184.1| Membrane protein oxaA 2 [Lactobacillus casei LC2W] gi|327385895|gb|AEA57369.1| Membrane protein oxaA 2 [Lactobacillus casei BD-II] Length = 332 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 35/257 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVST----A 387 +G FY I P+ LM + +LVG ++GIAI++ T+ V+L+ PL +Q + Sbjct: 41 FGTFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQE 100 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNIN--PLAGCWPILLQIPVFF 441 K IQP++ ++E K++ Q AM ++Y + + P GC P+L+Q+P+F Sbjct: 101 KQKIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFS 160 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y+ I+ S E+ A F+G + I T+ LP+ + Sbjct: 161 GLYQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPYI---------------VVS 201 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 I ++ PP K P++ + AGL +Y+ +I I+QQA++ + Sbjct: 202 LIMLQGVPPEQRKAMQTTAFLNPIMTFVFCMMYNAGLGLYFGAGGIILIIQQAIVT--YV 259 Query: 562 AEIGLIDRLRSTFSKNY 578 + R+ + +N Sbjct: 260 VTPNIRKRMDAEMEENP 276 >gi|294668108|ref|ZP_06733215.1| membrane protein insertase, YidC/Oxa1 family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309816|gb|EFE51059.1| membrane protein insertase, YidC/Oxa1 family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 150 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 90/163 (55%), Gaps = 24/163 (14%) Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y++ INPL GC P+LLQIP+F +Y I S+E+R AP+ GWI DL+ DP I Sbjct: 11 YRSEKINPLGGCLPMLLQIPIFIGLYWAIFSSVELRQAPWLGWITDLSRHDPWFIL---- 66 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 P++M+ +M+ Q ++PPP D QA ++ MP VF F FPAGL Sbjct: 67 ---------------PVLMTATMWFQTTLNPPPTDPMQAKMMKIMPFVFSFMFFLFPAGL 111 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 ++Y+ +N+++I QQ + + + R ++ + +N S+ Sbjct: 112 VLYYVVNNLLTIAQQWYVNRSTEQQ-----RKKAKWCRNSASE 149 >gi|16803419|ref|NP_464904.1| OxaA-like protein precursor [Listeria monocytogenes EGD-e] gi|46907607|ref|YP_013996.1| OxaA-like protein precursor [Listeria monocytogenes serotype 4b str. F2365] gi|47094519|ref|ZP_00232187.1| SpoJ family protein [Listeria monocytogenes str. 4b H7858] gi|47095963|ref|ZP_00233566.1| SpoJ family protein [Listeria monocytogenes str. 1/2a F6854] gi|224499955|ref|ZP_03668304.1| OxaA-like protein precursor [Listeria monocytogenes Finland 1988] gi|224501677|ref|ZP_03669984.1| OxaA-like protein precursor [Listeria monocytogenes FSL R2-561] gi|226223980|ref|YP_002758087.1| SpoIIIJ protein [Listeria monocytogenes Clip81459] gi|254824561|ref|ZP_05229562.1| OxaA-like protein [Listeria monocytogenes FSL J1-194] gi|254827640|ref|ZP_05232327.1| OxaA-like protein [Listeria monocytogenes FSL N3-165] gi|254829862|ref|ZP_05234517.1| OxaA-like protein precursor [Listeria monocytogenes 10403S] gi|254852573|ref|ZP_05241921.1| OxaA-like protein [Listeria monocytogenes FSL R2-503] gi|254898455|ref|ZP_05258379.1| OxaA-like protein precursor [Listeria monocytogenes J0161] gi|254912054|ref|ZP_05262066.1| SpoJ family protein [Listeria monocytogenes J2818] gi|254932564|ref|ZP_05265923.1| OxaA-like protein [Listeria monocytogenes HPB2262] gi|254936381|ref|ZP_05268078.1| OxaA-like protein [Listeria monocytogenes F6900] gi|255521766|ref|ZP_05389003.1| OxaA-like protein precursor [Listeria monocytogenes FSL J1-175] gi|284801765|ref|YP_003413630.1| OxaA-like protein precursor [Listeria monocytogenes 08-5578] gi|284994907|ref|YP_003416675.1| OxaA-like protein precursor [Listeria monocytogenes 08-5923] gi|300766399|ref|ZP_07076356.1| SpoJ family protein [Listeria monocytogenes FSL N1-017] gi|38503111|sp|Q8Y7A9|OXAA2_LISMO RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|67461028|sp|Q71ZU1|OXAA2_LISMF RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|16410795|emb|CAC99457.1| lmo1379 [Listeria monocytogenes EGD-e] gi|46880875|gb|AAT04173.1| SpoJ family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47015709|gb|EAL06639.1| SpoJ family protein [Listeria monocytogenes str. 1/2a F6854] gi|47017102|gb|EAL07967.1| SpoJ family protein [Listeria monocytogenes str. 4b H7858] gi|225876442|emb|CAS05151.1| Putative SpoIIIJ protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258600019|gb|EEW13344.1| OxaA-like protein [Listeria monocytogenes FSL N3-165] gi|258605886|gb|EEW18494.1| OxaA-like protein [Listeria monocytogenes FSL R2-503] gi|258608972|gb|EEW21580.1| OxaA-like protein [Listeria monocytogenes F6900] gi|284057327|gb|ADB68268.1| OxaA-like protein precursor [Listeria monocytogenes 08-5578] gi|284060374|gb|ADB71313.1| OxaA-like protein precursor [Listeria monocytogenes 08-5923] gi|293584123|gb|EFF96155.1| OxaA-like protein [Listeria monocytogenes HPB2262] gi|293590021|gb|EFF98355.1| SpoJ family protein [Listeria monocytogenes J2818] gi|293593800|gb|EFG01561.1| OxaA-like protein [Listeria monocytogenes FSL J1-194] gi|300512903|gb|EFK39993.1| SpoJ family protein [Listeria monocytogenes FSL N1-017] gi|332311821|gb|EGJ24916.1| Membrane protein oxaA 2 [Listeria monocytogenes str. Scott A] Length = 275 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 35/260 (13%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMK 390 G+F ++ +P + + VG N+GIAI++TT+ ++ L PL K Q + M Sbjct: 32 GFFSTYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMA 91 Query: 391 NIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 +P+IDE++ + K + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y Sbjct: 92 VAKPEIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYY 151 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ A +L + D M + I ++ L+ + Sbjct: 152 AIRGSSEI--ASHTFLWFNLGSPD------------------MVLAIIAGLVYLAQYFVS 191 Query: 506 KMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH---G 561 + P K Q I+ M P++ +F + P+ L +YW+ + Q + K++ Sbjct: 192 MIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 EI ++++ F + Q Sbjct: 252 PEIKVMEQEEKEFEQIVEEQ 271 >gi|228478121|ref|ZP_04062732.1| preprotein translocase subunit YidC [Streptococcus salivarius SK126] gi|228250301|gb|EEK09554.1| preprotein translocase subunit YidC [Streptococcus salivarius SK126] Length = 284 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 26/214 (12%) Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNIN 425 T+ ++ + PL +Q S+ ++ +QP++ L+ ++ + + L A LYK H +N Sbjct: 77 FTILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYAQQDLYKEHGVN 136 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P A P+L+Q P+ A+Y ++ E+R DL DP I Sbjct: 137 PYASFVPLLIQFPILMALYGALTRVPELREGT--FLWVDLGQKDPYFIL----------- 183 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWM-PVVFVFALSSFPAGLIIYW 542 PI+ + F+ ++ A AM ++N M P+ + + +G+ +YW Sbjct: 184 --------PILAAAFTFLSTWLTNKAAKDRSAMLLVMNIMLPIFIFWFGTQISSGVALYW 235 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + SN +VQ V I +RL + + Sbjct: 236 AVSNAFQVVQILVFNNPFKI-IEERNRLEAEEKE 268 >gi|217964474|ref|YP_002350152.1| membrane protein OxaA 2 [Listeria monocytogenes HCC23] gi|217333744|gb|ACK39538.1| membrane protein OxaA 2 [Listeria monocytogenes HCC23] gi|307570961|emb|CAR84140.1| inner membrane protein oxaA2 precursor [Listeria monocytogenes L99] Length = 275 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 35/260 (13%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMK 390 G+F ++ +P + + VG N+GIAI++TT+ ++ L PL K Q + M Sbjct: 32 GFFSTYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMA 91 Query: 391 NIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 +P+IDE++ + K + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y Sbjct: 92 VAKPEIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYY 151 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ F + +L + D M + I ++ L+ + Sbjct: 152 AIRGSSEIAEHTFLWF--NLGSPD------------------MVLAIIAGLVYLAQYFVS 191 Query: 506 KMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH---G 561 + P K Q I+ M P++ +F + P+ L +YW+ + Q + K++ Sbjct: 192 MIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 EI ++++ F + Q Sbjct: 252 PEIKVMEQEEKEFEQIVEEQ 271 >gi|116495158|ref|YP_806892.1| preprotein translocase subunit YidC [Lactobacillus casei ATCC 334] gi|116105308|gb|ABJ70450.1| Preprotein translocase subunit YidC [Lactobacillus casei ATCC 334] Length = 329 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 35/257 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVST----A 387 +G FY I P+ LM + +LVG ++GIAI++ T+ V+L+ PL +Q + Sbjct: 41 FGTFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQE 100 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNIN--PLAGCWPILLQIPVFF 441 K IQP++ ++E K++ Q AM ++Y + + P GC P+L+Q+P+F Sbjct: 101 KQKIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFS 160 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y+ I+ S E+ A F+G + I T+ LP+ + Sbjct: 161 GLYQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPYI---------------VVS 201 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 I ++ PP K P++ + AGL +Y+ +I I+QQA++ + Sbjct: 202 LIMLQGVPPEQRKAMQTTAFLNPIMTFVFCMMYNAGLGLYFGAGGIILIIQQAIVT--YI 259 Query: 562 AEIGLIDRLRSTFSKNY 578 + R+ + +N Sbjct: 260 VTPNIRKRMDAEMEENP 276 >gi|307709883|ref|ZP_07646331.1| membrane protein oxaA 1 [Streptococcus mitis SK564] gi|307619373|gb|EFN98501.1| membrane protein oxaA 1 [Streptococcus mitis SK564] Length = 274 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 100/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ L P+ + Q V++ M+ QP+I Sbjct: 37 FWSKFVYFFAEIIRFLSFDISIGVGIILFTVLIRTLLLPVFQVQMVASRKMQEAQPRIKA 96 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 97 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKT 156 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L D T + PI+ ++ F+ +S Sbjct: 157 G-HFLWI-NLGGVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 195 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P+G+ +YW+ SN ++Q + Sbjct: 196 NGATTAMMYGIPVLIFIFGVYAPSGVALYWAVSNAYQVLQTYFLN 240 >gi|328474988|gb|EGF45780.1| OxaA-like protein precursor [Listeria monocytogenes 220] Length = 273 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 35/260 (13%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMK 390 G+F ++ +P + + VG N+GIAI++TT+ ++ L PL K Q + M Sbjct: 32 GFFSTYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMA 91 Query: 391 NIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 +P+IDE++ + K + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y Sbjct: 92 VAKPEIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYY 151 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ A +L + D M + I ++ L+ + Sbjct: 152 AIRGSSEI--ASHTFLWFNLGSPD------------------MVLAIIAGLVYLAQYFVS 191 Query: 506 KMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH---G 561 + P K Q I+ M P++ +F + P+ L +YW+ + Q + K++ Sbjct: 192 MIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKH 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 EI ++++ F + Q Sbjct: 252 PEIKVMEQEEKEFEQIVEEQ 271 >gi|169334989|ref|ZP_02862182.1| hypothetical protein ANASTE_01395 [Anaerofustis stercorihominis DSM 17244] gi|169257727|gb|EDS71693.1| hypothetical protein ANASTE_01395 [Anaerofustis stercorihominis DSM 17244] Length = 249 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 17/226 (7%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 ++ + YN VG++G+AI+L +F KL+ P++ KQ ST MK I P++ +++EKFK Sbjct: 3 FGKVLLFIYNFVGSYGLAIILFALFAKLILLPISYKQIKSTQIMKVINPEVQKVQEKFKN 62 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS------LEMRHAPF- 458 + + M ++Y+ +N NP++GC P+ LQ P+ ++ VI M+H Sbjct: 63 DKAK-QGEEMWKVYEKYNYNPMSGCLPLFLQFPIIIGLFGVIRQPEAYVFIDGMKHVSMS 121 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ-- 516 + WIKD++ + LP +L + P+I ++ +IQ K + Sbjct: 122 FLWIKDISVSALDIARANGFALPTFLAMII-----PLINVIATYIQQKQATANQATEMGG 176 Query: 517 --AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 M+ N M ++ + +FP L IYW+ + ++ I+Q ++ K Sbjct: 177 TMQMMNNMMTLMIGWMSLTFPGALSIYWASTTILGILQTEIMYKFM 222 >gi|239632040|ref|ZP_04675071.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526505|gb|EEQ65506.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 320 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 35/257 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVST----A 387 +G FY I P+ LM + +LVG ++GIAI++ T+ V+L+ PL +Q + Sbjct: 29 FGTFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQE 88 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNIN--PLAGCWPILLQIPVFF 441 K IQP++ ++E K++ Q AM ++Y + + P GC P+L+Q+P+F Sbjct: 89 KQKIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFS 148 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y+ I+ S E+ A F+G + I T+ LP+ + Sbjct: 149 GLYQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPYI---------------VVS 189 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 I ++ PP K P++ + AGL +Y+ +I I+QQA++ + Sbjct: 190 LIMLQGVPPEQRKAMQTTAFLNPIMTFVFCMMYNAGLGLYFGAGGIILIIQQAIVT--YV 247 Query: 562 AEIGLIDRLRSTFSKNY 578 + R+ + +N Sbjct: 248 VTPNIRKRMDAEMEENP 264 >gi|50955953|ref|YP_063241.1| putative inner membrane protein translocase component YidC [Leifsonia xyli subsp. xyli str. CTCB07] gi|50952435|gb|AAT90136.1| preprotein translocase, YidC subunit [Leifsonia xyli subsp. xyli str. CTCB07] Length = 324 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 40/257 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVG----------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + I + +++ ++ L+ + ++I+ T+ V+ P+ +Q + Sbjct: 8 LWPIKWVVELILVAWHWLLYQVGFDPAAGLTWVLSIVGLTIVVRAALIPVFFRQIKNQRR 67 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 M I P++ ++++K+K Q + + + LYK NPL+ C P+LLQ+PVFFA++ Sbjct: 68 MLEIAPQLKKIQDKYKGKKDQFSREAMSRETMDLYKKTGTNPLSSCLPLLLQMPVFFALF 127 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY-------------LPGFMHVG 491 +V++ + + A+ TLFG+ P + + Sbjct: 128 QVLN---GAQGGHAGVGPLNSGLAEQFGSATLFGVAPLHQSFQGAMNANPVQTSVVIIAA 184 Query: 492 IWPIIMSLSMFIQM-----KMSPP-----PADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 I + M+ S FI K + P P K Q ++L +P VF+F+ +FP G++ Y Sbjct: 185 IMVVFMTGSQFITQLQIVSKNTSPETKASPQFKQQRILLYLLPFVFLFSGFAFPLGVMFY 244 Query: 542 WSWSNVISIVQQAVIMK 558 W SN ++ QQ ++++ Sbjct: 245 WLTSNFWTMGQQFLVIR 261 >gi|297545654|ref|YP_003677956.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843429|gb|ADH61945.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 206 Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + L+ + Y VGN+GIAI++ T+ +++L P +Q + MK IQP I EL++ Sbjct: 4 IAMYLGELLEFIYKYVGNYGIAIIIFTILIRILLLPFYVQQMNTMKKMKEIQPLIQELQK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + P Q L ++LY+ +NP GC P+LL + + + ++ ++ A + W Sbjct: 64 KYAKDP-QKLNIETMKLYQEKKVNPFGGCLPMLLPLIILWPLFAMLRTYPAFSTAS-FLW 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + LA DP I PI+ +++ +I M DK Q + Sbjct: 122 MHSLAERDPYYII-------------------PILATVTTYISSAM--VATDKSQNSMNI 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 161 MMSIFIGWITVSLPAGIGIYWVTSNIFQIVQQYIFMR 197 >gi|225859797|ref|YP_002741307.1| membrane protein OxaA 1 [Streptococcus pneumoniae 70585] gi|225721177|gb|ACO17031.1| membrane protein OxaA 1 [Streptococcus pneumoniae 70585] Length = 276 Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 101/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ + F + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I Sbjct: 39 FWSKSVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKA 98 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 99 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLK- 157 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L + D T + PI+ ++ F+ +S Sbjct: 158 TGHFLWI-NLGSVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 197 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 198 NGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242 >gi|331698376|ref|YP_004334615.1| membrane protein [Pseudonocardia dioxanivorans CB1190] gi|326953065|gb|AEA26762.1| membrane protein insertase, YidC/Oxa1 family [Pseudonocardia dioxanivorans CB1190] Length = 391 Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 97/274 (35%), Gaps = 52/274 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F+ P+ +M +++ + ++++ + ++ + Q S M Sbjct: 2 LNFLYYPVSAVMWFWHQAFALVLGPSSGFAWALSVVFLVLTLRAIMIKPFLSQVRSGRRM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + + P++ E+R++ Q + +L K H ++ L GC P+L+Q+PVF A+ V+ Sbjct: 62 RALAPQLAEIRKRHANDK-QKMLAETQKLQKEHGVSTLGGCLPLLIQMPVFLALLHVLRY 120 Query: 450 SL-----------------------EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 A +G + P ++ FG Sbjct: 121 FNRPGLTFEQNAAIGNYVFGPDEVRSFLEARLFGAPLSSWVSMPQSLLDSFGSHVERWEV 180 Query: 487 FMHVGIWPIIMSLSMFIQMKMS-------------PPPADKGQAMILNWMPVVFVF---- 529 + ++ +++ I + S P A + P +F Sbjct: 181 VVVAVPLMLLAAVATHITARNSQRQQLAAQTAPPEPGTQAAQMAGFMKLTPWIFPLGVIL 240 Query: 530 --ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +FP +++YW +N ++VQQ ++ K Sbjct: 241 GGLFFTFPIAILLYWLTNNGWTMVQQHLVHKAMD 274 >gi|307705714|ref|ZP_07642560.1| membrane protein oxaA 1 [Streptococcus mitis SK597] gi|307620728|gb|EFN99818.1| membrane protein oxaA 1 [Streptococcus mitis SK597] Length = 274 Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 100/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ L P+ + Q V++ M+ QP+I Sbjct: 37 FWSKFVYSFAEIIRFLSFNISIGVGIILFTVLIRTLLLPVFQVQMVASRKMQEAQPRIKA 96 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 97 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKT 156 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L D T + PI+ ++ F+ +S Sbjct: 157 G-HFLWI-NLGGVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 195 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P+G+ +YW+ SN ++Q + Sbjct: 196 NGATTAMMYGIPVLIFIFGVYAPSGVALYWAVSNAYQVLQTYFLN 240 >gi|322374156|ref|ZP_08048690.1| SpoIIIJ family protein [Streptococcus sp. C150] gi|321277122|gb|EFX54193.1| SpoIIIJ family protein [Streptococcus sp. C150] Length = 268 Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 26/214 (12%) Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP-PQVLQKAMIQLYKTHNIN 425 T+ ++ + PL +Q S+ ++ +QP++ L+ ++ S + L A +LYK H +N Sbjct: 61 FTILIRAVMIPLYNRQIKSSRELQELQPELRRLQGEYPGSENREALANAQQELYKEHGVN 120 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P A P+L+Q P+ A+Y ++ E+R DL DP I Sbjct: 121 PYASFVPLLIQFPILMALYGALTRVPELREGT--FLWVDLGQKDPYFIL----------- 167 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYW 542 PI+ + F+ ++ A + +M+L +PV + + +G+ +YW Sbjct: 168 --------PILAAAFTFLSTWLTNKAAKERSSMLLVMNILLPVFIFWFGTQISSGVALYW 219 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + SN +VQ V I +RL + + Sbjct: 220 AVSNAFQVVQILVFNNPFKI-IAERNRLEAEEKE 252 >gi|326383905|ref|ZP_08205589.1| putative inner membrane protein translocase component YidC [Gordonia neofelifaecis NRRL B-59395] gi|326197364|gb|EGD54554.1| putative inner membrane protein translocase component YidC [Gordonia neofelifaecis NRRL B-59395] Length = 384 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 100/282 (35%), Gaps = 65/282 (23%) Query: 339 FYFIAKPMFMLMSYFYNLVGN------------FGIAIMLTTVFVKLLFFPLAKKQYVST 386 FI P+ +M ++ L + + ++++ ++ + + KQ +T Sbjct: 2 LNFIYYPVSWIMWVWHWLFDSVMPNSPGWDGIAWALSVVFLVFTLRAILYKPFVKQIRTT 61 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ I P++ +R+K+ + + + M +L K H NPL GC P+ +QIPVF ++ V Sbjct: 62 KQMQEINPQMQAIRKKYANDRVK-MTEEMQKLQKEHGFNPLLGCLPMFMQIPVFIGLFHV 120 Query: 447 ISISLEMRHAPFWGWIKDLA----------------AADPTNIFT---LFGIL------- 480 + M + +AD F LFG+ Sbjct: 121 LRSFNRMGAGTSMPIGGSSSGGMTAEQTRETANYAFSADQVQNFLDARLFGVPLSSYITE 180 Query: 481 -------------PFYLPGFMHVGIWPIIMSLSMFIQ--------MKMSPPPADKGQAMI 519 P + + +M ++ + S D Q I Sbjct: 181 PVEQFKAFVEPGQPIDFTRWQIAAVVIPLMIVASIATHMNSRASVARQSAEAMDNPQTRI 240 Query: 520 L-----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + P+ + FP +++YW +N+ + QQ ++ Sbjct: 241 MNKLALYVFPLGILVTGPFFPVAILLYWVSNNLWTYGQQHLV 282 >gi|299143467|ref|ZP_07036547.1| stage III sporulation protein J [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517952|gb|EFI41691.1| stage III sporulation protein J [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 232 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 19/215 (8%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 F ++I+++T+ +KLL P+ + M +QP+I++L++K++ P + L QLY Sbjct: 24 FALSIIISTIIIKLLVVPINISMIKNQKKMAELQPEIEKLKKKYQNDP-KTLAVKQQQLY 82 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISIS---------LEMRHAPFWGWIKDLAAADP 470 K N N L+GC P++LQ V A Y+V + + + +I +L DP Sbjct: 83 KEANYNMLSGCLPMILQFVVLIAFYRVFWEPAKYAFTDKAMFDAMSKNFFYIANLQEKDP 142 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 T I + + +L F+ S Q M ++ ++ MP++ Sbjct: 143 TMILGIIAAITTFLTSFV---------SNQNPAQKTMQNKQSNSMMTSMMIVMPIMIFTM 193 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 F +GL++YW+ SNV +IVQQ + ++ + Sbjct: 194 ARKFQSGLVLYWTVSNVFAIVQQLITNRIIAGSVA 228 >gi|225861860|ref|YP_002743369.1| membrane protein OxaA 1 [Streptococcus pneumoniae Taiwan19F-14] gi|225726646|gb|ACO22497.1| membrane protein OxaA 1 [Streptococcus pneumoniae Taiwan19F-14] gi|327389035|gb|EGE87382.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA04375] gi|332199116|gb|EGJ13196.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA41317] Length = 257 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I Sbjct: 20 FWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKA 79 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 80 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLK- 138 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L + D T + PI+ ++ F+ +S Sbjct: 139 TGHFLWI-NLGSVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 178 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 179 NGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 223 >gi|210634757|ref|ZP_03298285.1| hypothetical protein COLSTE_02212 [Collinsella stercoris DSM 13279] gi|210158697|gb|EEA89668.1| hypothetical protein COLSTE_02212 [Collinsella stercoris DSM 13279] Length = 259 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 103/228 (45%), Gaps = 12/228 (5%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + +I + +F + G++G++I++ V ++L P+ K STA M+ +QPK+ E Sbjct: 2 WDWIVQILFQALQLIQGFAGDWGLSIIILVVIIRLALTPMMLKSTKSTARMQVLQPKLME 61 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-----ISLEM 453 ++E++ P Q + M + Y + NPL GC P+L+Q+P+ A++ ++ Sbjct: 62 IQERYADDP-QRQAEEMQKFYSENKFNPLGGCLPLLIQMPILIALFNLLRDLGHYFPDAA 120 Query: 454 RHAPFWGWIKDLAAADPTNIF--TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 + I P F LP+ L + + ++ + + Sbjct: 121 EQGFSFYNILPNLVMSPAQAFVDGFGAALPYLLALIL----FGVLTFIPQMYMTRNQTGA 176 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + M++ M ++ +F PAG+++Y+ S+ ++QQ + + Sbjct: 177 QAQSTKMMMVVMTIMMLFMGWGLPAGVLLYYDVSSAWQVIQQIFVTQK 224 >gi|307068652|ref|YP_003877618.1| preprotein translocase subunit YidC [Streptococcus pneumoniae AP200] gi|306410189|gb|ADM85616.1| Preprotein translocase subunit YidC [Streptococcus pneumoniae AP200] Length = 268 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I Sbjct: 31 FWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKA 90 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 91 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLK- 149 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L + D T + PI+ ++ F+ +S Sbjct: 150 TGHFLWI-NLGSVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 189 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 190 NGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 234 >gi|301300964|ref|ZP_07207129.1| sodium pump decarboxylase, gamma subunit [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851431|gb|EFK79150.1| sodium pump decarboxylase, gamma subunit [Lactobacillus salivarius ACS-116-V-Col5a] Length = 260 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 103/243 (42%), Gaps = 37/243 (15%) Query: 350 MSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNIQPKIDELREKFK 404 M + ++G ++G +I++ T V+L+ P+ Q + I+P++ +++E+ K Sbjct: 1 MEWLSGVLGGSYGWSIIVITFIVRLIMMPIMINQSKKATIQQEKIAMIRPQLAKIQEQQK 60 Query: 405 QSP----PQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISISLEMRHAPF 458 + +AM++LY+ +NI+ + G C P+L+Q+P+F A+Y I S E+ F Sbjct: 61 NAKTPEERNAASQAMMKLYQENNISMVGGIGCLPLLIQMPIFAALYAAIQYSPELSKTTF 120 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 G + + F + + + L G++ P K Sbjct: 121 MG----INLGHRSFTFVVLTFVIYALQGWLSTLGLP---------------EEQKKQMQS 161 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 ++ PV+ PAGL +Y+ + + +Q +I M R+R K Sbjct: 162 MIIVSPVMLTGMTYISPAGLGLYFFIGGIFACIQTLIINFM-------RPRIRKDIKKEL 214 Query: 579 NSQ 581 ++ Sbjct: 215 KNK 217 >gi|169832952|ref|YP_001695392.1| membrane protein OxaA 1 [Streptococcus pneumoniae Hungary19A-6] gi|168995454|gb|ACA36066.1| membrane protein OxaA 1 [Streptococcus pneumoniae Hungary19A-6] Length = 276 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 100/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I Sbjct: 39 FWSKLVYFFAEIIRFLSFDISIGVGIILFTILIRTVLLPVFQVQMVASRKMQEAQPRIKA 98 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 99 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKT 158 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L + D T + PI+ ++ F+ +S Sbjct: 159 G-HFLWI-NLGSVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 197 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 198 NGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242 >gi|15903894|ref|NP_359444.1| SpoIIIJ family protein [Streptococcus pneumoniae R6] gi|111658725|ref|ZP_01409362.1| hypothetical protein SpneT_02000138 [Streptococcus pneumoniae TIGR4] gi|116516129|ref|YP_817257.1| SpoIIIJ family protein [Streptococcus pneumoniae D39] gi|182684977|ref|YP_001836724.1| spoIIIJ family protein [Streptococcus pneumoniae CGSP14] gi|183603316|ref|ZP_02714133.2| membrane protein OxaA 1 [Streptococcus pneumoniae SP195] gi|183603675|ref|ZP_02718782.2| membrane protein OxaA 1 [Streptococcus pneumoniae CDC3059-06] gi|183603897|ref|ZP_02722826.2| membrane protein OxaA 1 [Streptococcus pneumoniae MLV-016] gi|221232758|ref|YP_002511912.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae ATCC 700669] gi|225857614|ref|YP_002739125.1| membrane protein OxaA 1 [Streptococcus pneumoniae P1031] gi|298501539|ref|YP_003723479.1| membrane protein OxaA family protein [Streptococcus pneumoniae TCH8431/19A] gi|307128242|ref|YP_003880273.1| membrane protein OxaA 1 [Streptococcus pneumoniae 670-6B] gi|38503004|sp|Q8DN93|OXAA1_STRR6 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|15459542|gb|AAL00655.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116076705|gb|ABJ54425.1| SpoIIIJ family protein [Streptococcus pneumoniae D39] gi|182630311|gb|ACB91259.1| spoIIIJ family protein [Streptococcus pneumoniae CGSP14] gi|183571669|gb|EDT92197.1| membrane protein OxaA 1 [Streptococcus pneumoniae SP195] gi|183575420|gb|EDT95948.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC3059-06] gi|183577374|gb|EDT97902.1| membrane protein OxaA 1 [Streptococcus pneumoniae MLV-016] gi|220675220|emb|CAR69809.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae ATCC 700669] gi|225725643|gb|ACO21495.1| membrane protein OxaA 1 [Streptococcus pneumoniae P1031] gi|298237134|gb|ADI68265.1| membrane protein OxaA family protein [Streptococcus pneumoniae TCH8431/19A] gi|301802719|emb|CBW35488.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae INV200] gi|306485304|gb|ADM92173.1| membrane protein OxaA 1 [Streptococcus pneumoniae 670-6B] Length = 276 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I Sbjct: 39 FWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKA 98 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 99 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLK- 157 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L + D T + PI+ ++ F+ +S Sbjct: 158 TGHFLWI-NLGSVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 197 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 198 NGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242 >gi|319936675|ref|ZP_08011088.1| membrane protein [Coprobacillus sp. 29_1] gi|319808232|gb|EFW04797.1| membrane protein [Coprobacillus sp. 29_1] Length = 286 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 110/241 (45%), Gaps = 15/241 (6%) Query: 334 IDWGWFYFI-AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +D G+F FI P+ + + +++GN ++ T+F+ +L P+ K VST M+ + Sbjct: 50 LDAGFFDFILTIPIAKGILFITDILGNVAWGVVGMTIFINILILPIMIKSTVSTQKMQML 109 Query: 393 QPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 QP++++++ K+ Q Q M LYK H+++ + + L +P+ A+++ + Sbjct: 110 QPELEKIQRKYAGRKDQASQMRQSAEMQALYKKHDVSMFSS-FTTFLTLPIMLAMWQSVQ 168 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + A F+G +L A + I + + Y+ VGI + I +K + Sbjct: 169 RIEILYQATFFGL--NLGATPMSQITSGNWV---YIIIVAIVGITQYLAIEINNIMLKRN 223 Query: 509 P----PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P K + M + V+ S P + +YW +++++I++ I H + Sbjct: 224 PRYKVSKQQKSMKTMNIVMTAMIVWFALSMPTAMSLYWITTSLVTIIRTVYIQIYHVEKK 283 Query: 565 G 565 Sbjct: 284 K 284 >gi|297588064|ref|ZP_06946708.1| YidC/Oxa1 family membrane protein insertase [Finegoldia magna ATCC 53516] gi|297574753|gb|EFH93473.1| YidC/Oxa1 family membrane protein insertase [Finegoldia magna ATCC 53516] Length = 221 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 16/215 (7%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 F I+I+L T+ KL+ P+ + +QP+I E++ K+K P Q Q M +LY Sbjct: 10 FAISILLLTLIYKLITLPVTIHTQKTQEQNALMQPEIKEIQRKYKNDP-QTQQLKMQELY 68 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH---------APFWGWIKDLAAADP 470 K +N NPL+GC PI+LQ+ + A+++V+ + A + WI DL DP Sbjct: 69 KKYNFNPLSGCLPIILQMVLVLALFRVMREPGKYMFDNVAKINEIARNFFWIPDLTKPDP 128 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 LFG+ + F + I M + + P + ++ +MP+ F Sbjct: 129 V----LFGLP--LINAFTQFLVAKISMPTNNKDKKSNEPDQMEMMNKSMIYFMPIFMFFI 182 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 S + +GLI+YW +SNV+ ++ + +I ++ Sbjct: 183 SSKYASGLILYWGFSNVLEVIIRLIIKNKDKKDVA 217 >gi|256847493|ref|ZP_05552939.1| inner membrane insertion protein [Lactobacillus coleohominis 101-4-CHN] gi|256716157|gb|EEU31132.1| inner membrane insertion protein [Lactobacillus coleohominis 101-4-CHN] Length = 315 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 34/252 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G Y ++AKPM LM + +L+GN +G AI++ + V+L+ P+ Q M Sbjct: 36 YGMVYEYLAKPMQHLMEWLASLMGNNYGWAIIVIVIVVRLILLPVMMSQMKKSTLMQEKM 95 Query: 390 KNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 IQP++ E++ + K + +AM+ LY+ +NI+ G C P+L+Q+PVF A+ Sbjct: 96 SMIQPQLREIQRQQKAAKTPEEQAAATQAMMALYRDNNISMTGGIGCLPLLIQLPVFAAL 155 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S ++ HA F G + P+ + + + + G+ + Sbjct: 156 YAAIRYSPDLYHATFLG----IPLGKPSIMLAILSFVAYLFQGW---------------L 196 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M P M++ PV+ F + AGL +Y+ + +I+Q +I Sbjct: 197 SMIGMPKNQQAQMRMMMLMSPVMIFFISMTSSAGLGLYFFIGGLFAILQTWLIN---AYR 253 Query: 564 IGLIDRLRSTFS 575 L ++ Sbjct: 254 PHLKKQIAQEVK 265 >gi|257067219|ref|YP_003153475.1| 60 kDa inner membrane insertion protein [Anaerococcus prevotii DSM 20548] gi|256799099|gb|ACV29754.1| 60 kDa inner membrane insertion protein [Anaerococcus prevotii DSM 20548] Length = 245 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 32/251 (12%) Query: 341 FIAKPMFMLMSYFYNLVGN----------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 FIA + LM + Y+ + + IAI++ T+ V LL P+ Q K Sbjct: 4 FIAGILGQLMRWIYDYLAANFTEPTNVSFYAIAIVIMTLLVSLLIIPMTVSQQKQAERTK 63 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-LAGCWPILLQIPVFFAIYKVISI 449 +PK++E+++K+ Q++Q+ M +LYK + P L+GC +++QI + F ++++ Sbjct: 64 VFKPKMEEIQKKYGYD-QQIMQQKMQELYKEEGVTPGLSGCLVMIIQILILFGLFRM--- 119 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS----MFIQM 505 M + + + L NI T F +P L + P++ SLS M Sbjct: 120 ---MSDTTKYVFTEGL-----DNIRTNFYWIPDLLQKDPYWFGLPLLTSLSQVGVQLFSM 171 Query: 506 KMSPPPADKGQAM-----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 K +P G AM +L MP+++ F PAGL +Y++ S++ +V ++ Sbjct: 172 KTNPQMQQAGGAMGGMNNMLLLMPLMYFFVFRGLPAGLPLYYTLSSLFRLVIMVIMHFSM 231 Query: 561 GAEIGLIDRLR 571 + ++ + Sbjct: 232 RNKKMELENEK 242 >gi|194398180|ref|YP_002038622.1| SpoIIIJ family protein [Streptococcus pneumoniae G54] gi|194357847|gb|ACF56295.1| SpoIIIJ family protein [Streptococcus pneumoniae G54] Length = 274 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I Sbjct: 37 FWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKA 96 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 97 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKT 156 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L + D T + PI+ ++ F+ +S Sbjct: 157 G-HFLWI-NLGSVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 195 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 196 NGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240 >gi|300857413|ref|YP_003782397.1| putative membrane protein OxaA [Clostridium ljungdahlii DSM 13528] gi|300437528|gb|ADK17295.1| predicted membrane protein OxaA [Clostridium ljungdahlii DSM 13528] Length = 218 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 30/235 (12%) Query: 341 FIAKPMFMLMSYFYNLVGN--------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 ++ + ++ V + +GIAI+L T+ ++++ PL KQ S+ M I Sbjct: 3 YLNNAFVQFFEFLHHSVTSVIPNQNMSYGIAIILMTIIIRIIILPLGIKQARSSLIMNEI 62 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP++ +L+EK+K+ P Q Q+ M++LYK +P +GC P+L+Q P+ A+Y V + Sbjct: 63 QPEVKKLQEKYKKDP-QKAQQEMMKLYKEKGASPFSGCLPLLIQWPILIALYYVFNNLSG 121 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + + WI DLA D + + +L G++ MS Sbjct: 122 INGVS-FLWIGDLAKTD--IFLAILSGVTTFLSGYLM-----------------MSGNSE 161 Query: 513 DKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 QA +N M V VF F A L++YW SN+I I Q V+ K+ + + Sbjct: 162 QAKQAKTMNIAMSAVMVFMSIKFKAALVLYWVVSNLIQIAQTVVLKKIEMKKGNI 216 >gi|256370584|ref|YP_003108409.1| putative inner membrane protein translocase component YidC [Candidatus Sulcia muelleri SMDSEM] gi|256009376|gb|ACU52736.1| putative inner membrane protein translocase component YidC [Candidatus Sulcia muelleri SMDSEM] Length = 571 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 94/495 (18%), Positives = 190/495 (38%), Gaps = 39/495 (7%) Query: 75 NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-----LSPSNTKNAYFAELDYVST 129 N L S++ G +L L+ L L N + +++ Sbjct: 91 NNVLKLSLSTIGGNIKNLFLKKNPNISIETENFSLLKENSSLFGLEFTNKFGKKIETYKL 150 Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNN 189 E+ + + L P I V+ + + + + V+ N Sbjct: 151 EFIPEIKEDLFKYTINMHAQLEPNVSIDYVYVVYKGNNYYIDFFIKSK---GLSEYVSKN 207 Query: 190 SIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN 249 S++ + + K +T + I + + + D +K S Sbjct: 208 SLN--FEWSQKILNLEKEKTIEKKYTNISFRI----NSKKNKINFFDKKKYSFKELDN-L 260 Query: 250 SWLGISDKYWASVFIPSKETSFHSQFK---YLSDGHARYQAKFSANEITIL--PGKSITT 304 W+ +++AS+ + + + K Y + ++ + KFS +I L + + Sbjct: 261 YWIANKQQFFASILCFKNQLTIDNSKKILIYSENINSDSELKFSELKIPFLLKKEEELNC 320 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG--WFYFIAKPMF-MLMSYFYNLVGNFG 361 + G ++ + + FE +I +G + + F L F N G Sbjct: 321 DYKWYFGPLDYHILKQ-----SKDGFEQIIPFGKGIAKVLNRYFFLNLFELFEKANINSG 375 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 I I+L T+ VKLL P+ QY M+N + ++ KF +P + +I+ YK Sbjct: 376 IIIILMTIVVKLLLSPITYSQYKFNFFMQNFFMQNFLMQTKFFLNP-----QILIEFYKK 430 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 INP+ ++QIP+F+++ + +R + W K+L+ +D I L +P Sbjct: 431 IGINPIYSLLGNMIQIPIFYSLMNFFPTLINLR-GKRFLWAKNLSYSD--RILNLNFNIP 487 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 Y H+ ++ I L +F+ K+ I ++ +F +++P+G+ IY Sbjct: 488 IYG---NHISLFNIFNILILFVFTKIRNRKKFSKTNRIYILFYIMMLFFFNNYPSGIYIY 544 Query: 542 WSWSNVISIVQQAVI 556 + SN+I+I+ ++I Sbjct: 545 YISSNIINILFYSLI 559 >gi|303254945|ref|ZP_07341026.1| SpoIIIJ family protein [Streptococcus pneumoniae BS455] gi|302598081|gb|EFL65146.1| SpoIIIJ family protein [Streptococcus pneumoniae BS455] Length = 274 Score = 140 bits (354), Expect = 4e-31, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I Sbjct: 37 FWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKA 96 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 97 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKT 156 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L + D T + PI+ ++ F+ +S Sbjct: 157 G-HFLWI-NLGSVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 195 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 196 NGATTAMMYGIPVLIFIFAVYAPGGVTLYWTVSNAYQVLQTYFLN 240 >gi|150019909|ref|YP_001312163.1| inner membrane protein translocase component YidC [Clostridium beijerinckii NCIMB 8052] gi|149906374|gb|ABR37207.1| 60 kDa inner membrane insertion protein [Clostridium beijerinckii NCIMB 8052] Length = 254 Score = 140 bits (354), Expect = 4e-31, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 25/228 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFG---------IAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F I M + ++ + + G +AI + T+ +++L P K S+ M Sbjct: 2 FQAIVNFMKGIFDSLHDFIVSMGISDVGLSYVLAIFIFTLIIRILILPFNIKAAKSSQGM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + IQP++ +L+ K+K P Q L ++LYK +N++ GC P LL +P+ A+Y V Sbjct: 62 QKIQPEVKKLQAKYKDDP-QKLNTETMRLYKENNVSVAGGCLPSLLPLPILMALYWVFMG 120 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + A + WI DL A D I + L Y+P + +MS S Q Sbjct: 121 IQGIEGAS-FLWIHDLFAPDKYYILPVLAALSTYIPSY--------LMSKSTPSQ----- 166 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P + M + +F + L++YW N+I +Q + Sbjct: 167 -PGGMNMGSMNLVMAGMMGVMSLNFKSILVLYWIIGNLIQTIQTYFLN 213 >gi|15901862|ref|NP_346466.1| SpoIIIJ family protein [Streptococcus pneumoniae TIGR4] gi|148989738|ref|ZP_01821047.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP6-BS73] gi|148992121|ref|ZP_01821895.1| SpoIIIJ family protein [Streptococcus pneumoniae SP9-BS68] gi|148998805|ref|ZP_01826242.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP11-BS70] gi|149007810|ref|ZP_01831406.1| SpoIIIJ family protein [Streptococcus pneumoniae SP18-BS74] gi|149011894|ref|ZP_01833042.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP19-BS75] gi|149023609|ref|ZP_01836112.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP23-BS72] gi|168484114|ref|ZP_02709066.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1873-00] gi|168487013|ref|ZP_02711521.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1087-00] gi|168492462|ref|ZP_02716605.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC0288-04] gi|298229605|ref|ZP_06963286.1| membrane protein OxaA 1 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254931|ref|ZP_06978517.1| membrane protein OxaA 1 [Streptococcus pneumoniae str. Canada MDR_19A] gi|303260531|ref|ZP_07346498.1| spoIIIJ family protein [Streptococcus pneumoniae SP-BS293] gi|303262888|ref|ZP_07348824.1| spoIIIJ family protein [Streptococcus pneumoniae SP14-BS292] gi|303265199|ref|ZP_07351111.1| spoIIIJ family protein [Streptococcus pneumoniae BS397] gi|303266566|ref|ZP_07352452.1| spoIIIJ family protein [Streptococcus pneumoniae BS457] gi|303268650|ref|ZP_07354441.1| spoIIIJ family protein [Streptococcus pneumoniae BS458] gi|38503144|sp|Q97NI6|OXAA1_STRPN RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|14973552|gb|AAK76106.1| SpoIIIJ family protein [Streptococcus pneumoniae TIGR4] gi|147755366|gb|EDK62416.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP11-BS70] gi|147760660|gb|EDK67633.1| SpoIIIJ family protein [Streptococcus pneumoniae SP18-BS74] gi|147763849|gb|EDK70782.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP19-BS75] gi|147924854|gb|EDK75937.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP6-BS73] gi|147929170|gb|EDK80181.1| SpoIIIJ family protein [Streptococcus pneumoniae SP9-BS68] gi|147929708|gb|EDK80699.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP23-BS72] gi|172042591|gb|EDT50637.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1873-00] gi|183570087|gb|EDT90615.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1087-00] gi|183573390|gb|EDT93918.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC0288-04] gi|302635971|gb|EFL66470.1| spoIIIJ family protein [Streptococcus pneumoniae SP14-BS292] gi|302638329|gb|EFL68797.1| spoIIIJ family protein [Streptococcus pneumoniae SP-BS293] gi|302641815|gb|EFL72171.1| spoIIIJ family protein [Streptococcus pneumoniae BS458] gi|302643903|gb|EFL74164.1| spoIIIJ family protein [Streptococcus pneumoniae BS457] gi|302645280|gb|EFL75515.1| spoIIIJ family protein [Streptococcus pneumoniae BS397] gi|332071754|gb|EGI82246.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA17545] gi|332071835|gb|EGI82325.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA17570] gi|332199188|gb|EGJ13267.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA47368] Length = 274 Score = 140 bits (354), Expect = 4e-31, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I Sbjct: 37 FWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKA 96 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 97 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKT 156 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L + D T + PI+ ++ F+ +S Sbjct: 157 G-HFLWI-NLGSVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 195 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 196 NGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240 >gi|269838379|ref|YP_003320607.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus DSM 20745] gi|269787642|gb|ACZ39785.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus DSM 20745] Length = 278 Score = 140 bits (354), Expect = 4e-31, Method: Composition-based stats. Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 24/234 (10%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 +P +E +D + + + G+ G+A++L T+ +K+ P+ + ST Sbjct: 1 MPGWEQFVDL---------IAGGLQGLAAVTGSAGLAVILFTLLLKIALLPITVRTRRST 51 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A ++ IQP + EL+EK+ Q ++LY+ H INP AGC P +++IP F + Sbjct: 52 AALRAIQPALRELQEKYPDD-RQRRSAETLKLYQQHGINPAAGCLPTVIKIPFFIGLIAA 110 Query: 447 ---ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 +S S + + W+ DLA ADP +I + L L G M + Sbjct: 111 IRELSRSGDGAWTESFLWLPDLATADPLHILPIAAGLFQLLTGMM-----------ARPA 159 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + + +A + P + V PAG ++YW+ S + SI +Q ++ Sbjct: 160 GQRGAARGKGQARAGLALLSPAIVVAIGWHAPAGPVLYWAVSALFSIGEQWLMT 213 >gi|225020858|ref|ZP_03710050.1| hypothetical protein CORMATOL_00866 [Corynebacterium matruchotii ATCC 33806] gi|305681586|ref|ZP_07404392.1| membrane protein insertase, YidC/Oxa1 family [Corynebacterium matruchotii ATCC 14266] gi|224946340|gb|EEG27549.1| hypothetical protein CORMATOL_00866 [Corynebacterium matruchotii ATCC 33806] gi|305658746|gb|EFM48247.1| membrane protein insertase, YidC/Oxa1 family [Corynebacterium matruchotii ATCC 14266] Length = 319 Score = 140 bits (354), Expect = 4e-31, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 107/298 (35%), Gaps = 61/298 (20%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F+ P+ +++ ++ + + +AI+L T V++L Q S M Sbjct: 2 LNFVYWPISVILWLWHKALSFVLNPDSGLTWVLAIVLLTFTVRILLVRPTINQMRSMRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + IQP++ E+R K+K +++Q +L K NPLAGC PIL+Q+PVF +Y V+ Sbjct: 62 QEIQPQMQEIRNKYKNDQQKMMQ-ETQKLQKEMGFNPLAGCLPILVQMPVFLGLYHVLRS 120 Query: 450 SL-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-IWPIIMSLSMF----- 502 A G + P F+ + F V I M SM+ Sbjct: 121 FNRTGTGAGQLGLTPEQNRMTPNYFFSAEDVQSFLDARLFKVPLSAYISMPESMYQAFPG 180 Query: 503 -------------------------------------IQMKMSPPPADKGQA-------M 518 K P D+ Q M Sbjct: 181 DFTKTNIIMLAAPLVVIIVVAIHMNARLSVDRQKARIASGKQKPAANDQMQMQADMMNKM 240 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +L ++P + + + GL+ Y +NV + QQ + K+ E + + + Sbjct: 241 MLWFLPGTILLTCTFWHIGLLFYMVSNNVWTFFQQRWVFKLMDTEEEAELQAKKDAKR 298 >gi|295099702|emb|CBK88791.1| protein translocase subunit yidC [Eubacterium cylindroides T2-87] Length = 330 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 110/279 (39%), Gaps = 41/279 (14%) Query: 313 KEFPTIHHYEKDLAIPR-FEMLIDWGWF-YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 E+ ++ + P F I GWF I P+ +++ + + G+ I++TT+ Sbjct: 65 NEYKKLNDDDTITIEPTTFSEAIADGWFDGLIVWPIAQIINTIASYT-DAGVGIIVTTLL 123 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINP 426 ++L+ F +K +S+ M+ IQP++ +++ K+K ++ + LYK ++I+P Sbjct: 124 IQLIVFMFTRKSQMSSQRMQEIQPEMQKIQNKYKDKTDDRSKMMMYQETQNLYKKYDIHP 183 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 + +Q+P+ +Y + + + F+G D I+ + Sbjct: 184 FGSILVMFIQLPIMMGMYYATMRAASVVYGSFFGLPFSGTPIDGFTQMQFGYIIIY---- 239 Query: 487 FMHVGIWPIIMSLSMFIQMKM----------------------SPPPADKGQAMILNWMP 524 ++M + + MKM + + + Sbjct: 240 --------VLMIVCQLLSMKMPQILKKIQDKKDHVKEKKYAEENQNSMMNTMNTTMYFST 291 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + F S+P + YW S++I I+Q V+ K+ + Sbjct: 292 AMIAFLYISWPIAMSFYWLVSSIIRIIQSVVLHKIMNKD 330 >gi|332199472|gb|EGJ13548.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA47901] Length = 257 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I Sbjct: 20 FWSKLVYFFAKIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKA 79 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 80 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLK- 138 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L + D T + PI+ ++ F+ +S Sbjct: 139 TGHFLWI-NLGSVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 178 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 179 NGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 223 >gi|299537937|ref|ZP_07051223.1| membrane protein oxaA 2 precursor [Lysinibacillus fusiformis ZC1] gi|298726519|gb|EFI67108.1| membrane protein oxaA 2 precursor [Lysinibacillus fusiformis ZC1] Length = 210 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 109/229 (47%), Gaps = 32/229 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN----MKNIQP 394 F+A+P+ L+ + ++ G++ ++++ T+ V+L+ PL + + M I+P Sbjct: 2 LTFLAQPIINLIHFIHSFTGSYALSVIAITIAVRLILMPLFIRSAKHQKHSKELMTTIKP 61 Query: 395 KIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++D L +K+K S +++Q+ + +L + L GC PIL+Q+P+ F++Y I + Sbjct: 62 ELDALTDKYKNSQSESEKRMVQQQIQELTSASLKSSLLGCLPILIQLPILFSLYYAIKL- 120 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 DL A ++ G + + +I L FIQ ++ Sbjct: 121 -------------DLVIASENFLWMNLGTIDIGVS---------MIACLIYFIQSCIALE 158 Query: 511 PADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + I+ ++ P++ + PA + IYW+ S ++ IVQQ +I K Sbjct: 159 KSQPLNMKIMVFINPIMILIFSLFNPAIIPIYWTVSALLLIVQQLIIKK 207 >gi|239636059|ref|ZP_04677073.1| putative membrane protein [Staphylococcus warneri L37603] gi|239598330|gb|EEQ80813.1| putative membrane protein [Staphylococcus warneri L37603] Length = 270 Score = 140 bits (353), Expect = 5e-31, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 113/260 (43%), Gaps = 35/260 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----I 392 ++ +PM L+ F L N+G+AI+ + V+ + P Q + M+ + Sbjct: 30 FYNTFVQPMDRLLHLFGRLFNDNYGLAIIAIVLIVRFILLPFMLIQVKNMHIMREKTKVV 89 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYK 445 QP+ID++REK K++ Q + ++ YK + INP GC P+++QIP+ +Y Sbjct: 90 QPQIDKIREKIKEADSQEERNAANQLLMNKYKQYGINPFKNIIGCLPVIIQIPILMGLYM 149 Query: 446 VI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + S + P + W +P + TL L +++ ++ +P + ++ Sbjct: 150 SLKYPSSDGITKYPRFLWFN---LTEPNIMMTLIAALMYFIQPLVNSIHYPKDERKTYYV 206 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ P+ +A + L +YWS S I+Q + H A+ Sbjct: 207 ---------------MMILSPIFITYASLHSASALGLYWSVSAAFLIIQMHFAHR-HYAK 250 Query: 564 IGLID--RLRSTFSKNYNSQ 581 +G + +LR + ++ + Sbjct: 251 VGRSEAQQLRQSLEQHKEQR 270 >gi|145221425|ref|YP_001132103.1| putative inner membrane protein translocase component YidC [Mycobacterium gilvum PYR-GCK] gi|145213911|gb|ABP43315.1| 60 kDa inner membrane insertion protein [Mycobacterium gilvum PYR-GCK] Length = 376 Score = 140 bits (353), Expect = 6e-31, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 101/272 (37%), Gaps = 48/272 (17%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQ 382 M +W FI P+ +M +Y + +++M ++ + + KQ Sbjct: 1 MSFNWMSLDFIYYPVSAIMWVWYKAFAFLLGPTNFFAWALSVMFLVFTLRAILYKPFVKQ 60 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 +T M+ +QP+I L++K+ + Q + M +L + H NP+ GC P+L Q+PVF Sbjct: 61 IRTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQVPVFLG 119 Query: 443 IYKVISISLEMRH---------------APFWGWIKDLAAADPTNIF------------T 475 +Y + + ++ D+ N+F Sbjct: 120 LYHTLMSFNRTQTGIGRLGLSVEENRQLGNYFFSATDVQHFLDANLFGAPLGATMIQQHG 179 Query: 476 LFGILPFYLPGFMHVG-IWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMP 524 L F + VG I+ ++ + + SP A Q ++ P Sbjct: 180 LDAFTEFNRTSVIIVGVPIMILAGIATYFNSRASVARQSPEAAANPQTAMMNKLALYVFP 239 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + V P +I+YW +N+ + QQ + Sbjct: 240 LGVVVGGPFLPLAIIMYWLANNIWTFGQQHYV 271 >gi|302024343|ref|ZP_07249554.1| membrane protein OxaA 2 precursor [Streptococcus suis 05HAS68] Length = 249 Score = 140 bits (353), Expect = 6e-31, Method: Composition-based stats. Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 33/227 (14%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMKNIQPKIDELREKFKQSPPQVLQKAM 415 FG+AI++ T+ V+ + PL Q A M ++P + ++E+ K + Q Q A Sbjct: 4 FGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYLKPILGPIQERMKNASSQEEQLAA 63 Query: 416 IQLY----KTHNINPLAG--CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 Q Y K + ++ L G C P+L+Q+P F AIY + + A F G + Sbjct: 64 QQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFAARHTPGISEATFLG----INLGS 119 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFV 528 + I T+ + +Y + M++ K Q + M P++ + Sbjct: 120 TSLILTVVAGILYYAQSLL----------------MQVGMDEEQKKQMKTMALMNPIMIM 163 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 PAG+ +YW + I+QQA+ + + + ++ F Sbjct: 164 MFSFGSPAGVTLYWVVGGLFGILQQAITNFIL--KPRIRKQVEEEFK 208 >gi|289167102|ref|YP_003445369.1| oxaA1 [Streptococcus mitis B6] gi|288906667|emb|CBJ21501.1| oxaA1 [Streptococcus mitis B6] Length = 276 Score = 140 bits (353), Expect = 6e-31, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 96/222 (43%), Gaps = 21/222 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I Sbjct: 39 FWSKFVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKA 98 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 99 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKT 158 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + WI +L D T + + + +L ++ + Sbjct: 159 G-HFLWI-NLGGVDTTLVLPVLAAVFTFLSTWLSNKALSERNGATT-------------- 202 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 203 --AMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242 >gi|225855530|ref|YP_002737042.1| membrane protein OxaA 1 [Streptococcus pneumoniae JJA] gi|225724047|gb|ACO19900.1| membrane protein OxaA 1 [Streptococcus pneumoniae JJA] gi|301794976|emb|CBW37440.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae INV104] Length = 276 Score = 140 bits (353), Expect = 6e-31, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I Sbjct: 39 FWSKLVYFFAKIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKA 98 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 99 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKT 158 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L + D T + PI+ ++ F+ +S Sbjct: 159 G-HFLWI-NLGSVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 197 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 198 NGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242 >gi|269217839|ref|ZP_06161693.1| preprotein translocase, YidC subunit [Actinomyces sp. oral taxon 848 str. F0332] gi|269212774|gb|EEZ79114.1| preprotein translocase, YidC subunit [Actinomyces sp. oral taxon 848 str. F0332] Length = 382 Score = 140 bits (353), Expect = 6e-31, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 35/277 (12%) Query: 340 YFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + IA M +L F + ++I+ TV V+LL PL KQ S+ + IQ Sbjct: 2 WVIAWIMEILRRVFVAFGLPDGAGAAWVLSIIGLTVVVRLLVLPLYNKQIRSSRQAQVIQ 61 Query: 394 PKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P++ ++++K+K + +Q+ M +Y+ H +P A C P+L+Q+P+ FA+Y+VIS Sbjct: 62 PEVQKIQKKYKGKKDMVSRRRMQEEMQAVYRKHGTSPFATCLPMLVQMPILFALYRVISA 121 Query: 450 SLEMRHA--PFWGWIKDLAAAD--PTNIFTLFGILPFYLPG----FMHVGIWPIIMSLSM 501 + G I A D + +F F + +G+ +IMS +M Sbjct: 122 FPGISSGRREALGPITKELATDFEKSTVFGAPLATNFRTAASTNSQIVIGVLVLIMSATM 181 Query: 502 FIQM-----KMSP-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 F K P P + Q +++ MP++++F +++YW N+ + Sbjct: 182 FYTQHQLMRKNMPESALDKSNPMYRTQQIMMYGMPIMYIFMGGVLQVAVLVYWVAGNIWN 241 Query: 550 IVQQAVIMKMH-----GAEIGLIDRLRSTFSKNYNSQ 581 + QQA ++ + A RLR + S+ Sbjct: 242 LCQQAWFIRNNPTPGSQAYKERQKRLREKRERKGLSK 278 >gi|307710908|ref|ZP_07647334.1| membrane protein oxaA 1 [Streptococcus mitis SK321] gi|307617264|gb|EFN96438.1| membrane protein oxaA 1 [Streptococcus mitis SK321] Length = 274 Score = 140 bits (353), Expect = 6e-31, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 99/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ L P+ + Q V++ M+ QP+I Sbjct: 37 FWSKFVYFFAEIIRFLSFDISIGVGIILFTVLIRTLLLPVFQVQMVASRKMQEAQPRIKA 96 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 97 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKT 156 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L D T + PI+ ++ F+ +S Sbjct: 157 G-HFLWI-NLGGVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 195 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 196 NGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240 >gi|301800797|emb|CBW33449.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae OXC141] Length = 276 Score = 140 bits (353), Expect = 7e-31, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I Sbjct: 39 FWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKA 98 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 99 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKT 158 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L + D T + PI+ ++ F+ +S Sbjct: 159 G-QFLWI-NLGSVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 197 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 198 NGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242 >gi|307707727|ref|ZP_07644206.1| membrane protein OxaA 1 [Streptococcus mitis NCTC 12261] gi|307616225|gb|EFN95419.1| membrane protein OxaA 1 [Streptococcus mitis NCTC 12261] Length = 274 Score = 140 bits (352), Expect = 7e-31, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 99/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ QP+I Sbjct: 37 FWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTVLLPVFQVQMVASRKMQEAQPRIKA 96 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 97 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKT 156 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L D T + PI+ ++ F+ +S Sbjct: 157 G-HFLWI-NLGGVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 195 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 196 NGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240 >gi|308804920|ref|XP_003079772.1| putative cytochrome oxidase assembly protein (ISS) [Ostreococcus tauri] gi|116058229|emb|CAL53418.1| putative cytochrome oxidase assembly protein (ISS) [Ostreococcus tauri] Length = 337 Score = 140 bits (352), Expect = 7e-31, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 102/240 (42%), Gaps = 25/240 (10%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + M YF+ G + +AI+ TVF++ + FPL Q +TA M+ +P+++ Sbjct: 69 WPTTAALMYAMEYFHVAHGLEWWLAIVGATVFMRTVTFPLVVMQMRNTARMQLCKPELEA 128 Query: 399 LREKFKQSPPQ------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 L+ K K +P Q M +++K +++NP P+L+ PVF + Y IS Sbjct: 129 LQAKMKSNPSQDPELATAYYAEMQKVWKKYDVNPFKSFAPVLINAPVFISFYFAISKMAA 188 Query: 453 MRHAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + G DL+ ADPT + L F + ++ Sbjct: 189 GVPSFETGGPSMYPDLSIADPTYSLPILSSLTFLASVELG--------------TVEGMQ 234 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM-KMHGAEIGLID 568 L + V V +SFP G+ +YW SN+ S VQ ++ K A +G+ D Sbjct: 235 TSQSAQMKWFLRALAVAMVPLTASFPQGVFVYWITSNMFSGVQTSITRTKGFKAAMGIPD 294 >gi|332686710|ref|YP_004456484.1| inner membrane protein translocase component YidC [Melissococcus plutonius ATCC 35311] gi|332370719|dbj|BAK21675.1| inner membrane protein translocase component YidC, OxaA protein [Melissococcus plutonius ATCC 35311] Length = 315 Score = 140 bits (352), Expect = 7e-31, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 33/257 (12%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMK 390 G Y + +PM +++Y + N+G AI++ T+ V+++ PL + K V + M+ Sbjct: 36 GIVYNLLVQPMSNMITYLVNHFNWNYGWAIIVITIVVRIIILPLGLYQSHKSLVQSEKMQ 95 Query: 391 NIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++P++D + KQ+ Q Q M ++YK +N++ + G C P+L+Q+P+F A++ Sbjct: 96 ALKPQLDIAQSNLKQAKTQEEQLNARADMQRVYKENNVSMVGGIGCLPLLIQMPIFSALF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A F G ++ P+ +F + L G++ P Sbjct: 156 FAAKYTKGITQANFLG----ISLGKPSLVFVALAGAAYLLQGYLSTIGIP---------- 201 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 K +L P++ VF S PAG+ +YW + + +Q + + +I Sbjct: 202 -----EEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQTFITNVLMRPKI 256 Query: 565 GLIDRLRSTFSKNYNSQ 581 ++ N Q Sbjct: 257 K--AKIEEDLKNNPPKQ 271 >gi|237650612|ref|ZP_04524864.1| membrane protein OxaA 1 [Streptococcus pneumoniae CCRI 1974] gi|237821072|ref|ZP_04596917.1| membrane protein OxaA 1 [Streptococcus pneumoniae CCRI 1974M2] Length = 274 Score = 140 bits (352), Expect = 8e-31, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I Sbjct: 37 FWSKLVYFFAKIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKA 96 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 97 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKT 156 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L + D T + PI+ ++ F+ +S Sbjct: 157 G-HFLWI-NLGSVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 195 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 196 NGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240 >gi|15896967|ref|NP_350316.1| putative inner membrane protein translocase component YidC [Clostridium acetobutylicum ATCC 824] gi|38503142|sp|Q97CW0|OXAA_CLOAB RecName: Full=Membrane protein oxaA gi|15026843|gb|AAK81656.1|AE007868_12 Inner membrane protein, SpoIIIJ [Clostridium acetobutylicum ATCC 824] gi|325511144|gb|ADZ22780.1| putative inner membrane protein translocase component YidC [Clostridium acetobutylicum EA 2018] Length = 254 Score = 140 bits (352), Expect = 8e-31, Method: Composition-based stats. Identities = 60/238 (25%), Positives = 112/238 (47%), Gaps = 26/238 (10%) Query: 341 FIAKPMFMLMSYFYNLVG----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + + + YN+V ++G+AI++ T+ +K L P + KQ S+ M +QP++ Sbjct: 10 LFVQFFDSINKFVYNIVPDKNYSYGLAIIILTIIIKTLLVPFSIKQIKSSVLMNALQPEL 69 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +L+ K K P Q LQ+ ++LYK N+NP GC +++Q P+ A+Y V Sbjct: 70 KKLQTKLKSDP-QKLQQETMKLYKEKNVNPFGGCLLLIIQYPILIALYYVFYSLHI--KG 126 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP----PA 512 + WI DL+ + +T I PI+ + ++ ++ P PA Sbjct: 127 IGFLWIHDLSQKATFSNWT--------------TWILPIVSGATTYLSGILTMPPSSDPA 172 Query: 513 DKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + Q +N M + ++ +F A L++YW+ SN+ + Q +I+ A++ Sbjct: 173 QRKQTTTMNIGMSIFLLWMSWNFSAALVLYWTVSNLFQMAQSKIIITAVTAKLEAEKN 230 >gi|148985978|ref|ZP_01819031.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP3-BS71] gi|147921951|gb|EDK73076.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP3-BS71] Length = 274 Score = 140 bits (352), Expect = 9e-31, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ QP+I Sbjct: 37 FWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKA 96 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 97 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKT 156 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L + D T + PI+ ++ F+ +S Sbjct: 157 G-QFLWI-NLGSVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 195 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 196 NGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240 >gi|260579557|ref|ZP_05847428.1| preprotein translocase YidC subunit [Corynebacterium jeikeium ATCC 43734] gi|258602328|gb|EEW15634.1| preprotein translocase YidC subunit [Corynebacterium jeikeium ATCC 43734] Length = 324 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 117/307 (38%), Gaps = 67/307 (21%) Query: 341 FIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 FI P+ ++ +++ L + +AIM +++L Q S+ M+ Sbjct: 3 FIYYPVSGVLWFWHKLFSYVLSPDSGITWALAIMFLVFTIRILLVKPMANQLRSSRKMQE 62 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QPK+ EL+ K+K Q L M +L K +NPLA C P+L+Q+P+F ++ V+ Sbjct: 63 MQPKMQELQRKYKND-RQTLAVEMRKLQKEMGVNPLASCLPMLVQMPIFLGLFHVLRSFN 121 Query: 452 --------------EMRHAPFWGW-----------------IKDLAAADPTNI--FTLFG 478 E R+ P + + + + DP N F+ G Sbjct: 122 RTGTGVGQLGMTVEETRNTPNYFFGVHEVQSFLDARIFGTPLSGFISMDPNNYRAFSADG 181 Query: 479 ILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSPPPADKGQA-------------------- 517 + F + V ++ S+ M +MS A K +A Sbjct: 182 HVDFTRTNIILVVVPMMLVASVLMHFSARMSMDRAAKRRAENPIKANDPKAQQTQMQMDM 241 Query: 518 ---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 M+L MPV+++ ++ GL +Y + S +QQ + K AE + Sbjct: 242 MQKMMLWVMPVLYLMGGFAWQVGLALYMVTNMTWSYLQQFFLYKKMDAEEEAQKEAVAAA 301 Query: 575 SKNYNSQ 581 + + Sbjct: 302 KRTSAPK 308 >gi|213400721|gb|ACJ47009.1| hypothetical protein [Wolbachia endosymbiont of Litomosoides sigmodontis] Length = 171 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 3/169 (1%) Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 EG + D L E Y +I K I +W G +DKYW + IP + + Sbjct: 1 HEGVLGAF-DNKLEEWTYKNIAKKHLIKTSTSKKNWFGFADKYWLTAIIPEESDKTNVSI 59 Query: 276 KYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 K+ S +G ++Q F+ IL G S + N+ FAGAK+ + +Y+ L IP F+ + Sbjct: 60 KHTSANGIDKFQVDFAKPRKNILSGTSASNVNYFFAGAKKLNLLDYYKSILNIPLFDKAV 119 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 D+G YFI KP+F+L+ YF ++ NFG+AI+L T+ +KL PL+ K + Sbjct: 120 DFGVLYFITKPVFLLLEYFNFVLRNFGLAILLLTLVIKLFMLPLSNKSH 168 >gi|304439080|ref|ZP_07398999.1| membrane protein OxaA [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372439|gb|EFM26026.1| membrane protein OxaA [Peptoniphilus duerdenii ATCC BAA-1640] Length = 238 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 29/243 (11%) Query: 342 IAKPMFMLMSYFYNLVGN----------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 I+ + + + Y+++ F I I+++T +++L P+ Q + M Sbjct: 4 ISTILGIFFRFIYDVLSKGFPEPKSISFFAITIIISTFIIRVLMLPIGISQMRNQKKMAE 63 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++++++ K+K P Q L QLYK N N L+GC P+++Q+ V Y+V Sbjct: 64 LQPELEKIQTKYKNDP-QTLAAKQRQLYKDANYNMLSGCLPMIVQMMVLIGFYRVFYEPA 122 Query: 452 EMRH---------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 A + +IKD+ D T I + + +L + + S Sbjct: 123 TYVFKEPGLYDSIAKNFFYIKDIDLKDTTLILPIVAAVTTFLSSW--ITQNSTANKASQT 180 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 Q + + MPV+ +F + L++YW+ SN+ ++QQ + + Sbjct: 181 AQ-------SQSMMNTMTLVMPVMIFMMGRNFASALVLYWTVSNLFQVLQQLIQNVIIKR 233 Query: 563 EIG 565 E+ Sbjct: 234 EVE 236 >gi|148927718|ref|ZP_01811160.1| 60 kDa inner membrane insertion protein [candidate division TM7 genomosp. GTL1] gi|147886931|gb|EDK72459.1| 60 kDa inner membrane insertion protein [candidate division TM7 genomosp. GTL1] Length = 320 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 125/283 (44%), Gaps = 44/283 (15%) Query: 341 FIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 I +P+F ++ Y ++ FG+A+++ T+ V+ +PL KKQ T M+ IQP++ + Sbjct: 4 LIVQPIFNVLLAIYGIIPGNDFGVALIIFTILVRFAMWPLLKKQLHQTRLMRQIQPELKK 63 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA-- 456 ++ + K + Q M++LY+ + P + +L+Q+P+F A+++VI I RH Sbjct: 64 VKARAKGNKMLESQM-MMELYRERGVRPFSSIGLLLIQLPIFIALFRVIQILTSQRHDIS 122 Query: 457 -------PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP------IIMSLSMFI 503 G I++L A LFG++ G++ I+ ++ +I Sbjct: 123 RYTYDFMQNLGAIRELVAHPDKFNEMLFGVINLTQHAVTSQGVYVPLLLLAILAAVLQYI 182 Query: 504 QMKMSPPPADKGQAM-------------------------ILNWMPVVFVFALSSFPAGL 538 Q K P D + + ++ +P V F P L Sbjct: 183 QSKQVLPQQDSKKKLRDILKDSSKGKAVDQSEVTAIMSGRMIMLLPAVLFFIGLYLPGAL 242 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIG-LIDRLRSTFSKNYNS 580 ++Y++ S++++I QQ V++ E+ + D+ K + Sbjct: 243 VLYYAVSSLVAIAQQRVVLSKDLEEMETIADKDNKRTPKKASK 285 >gi|68537196|ref|YP_251901.1| putative inner membrane protein translocase component YidC [Corynebacterium jeikeium K411] gi|68264795|emb|CAI38283.1| preprotein translocase YidC subunit [Corynebacterium jeikeium K411] Length = 324 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 117/307 (38%), Gaps = 67/307 (21%) Query: 341 FIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 FI P+ ++ +++ L + +AIM +++L Q S+ M+ Sbjct: 3 FIYYPVSGVLWFWHKLFSYVLSPDSGITWALAIMFLVFTIRILLVKPMANQLRSSRKMQE 62 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QPK+ EL+ K+K Q L M +L K +NPLA C P+L+Q+P+F ++ V+ Sbjct: 63 MQPKMQELQRKYKND-RQTLAVEMRKLQKEMGVNPLASCLPMLVQMPIFLGLFHVLRSFN 121 Query: 452 --------------EMRHAPFWGW-----------------IKDLAAADPTNI--FTLFG 478 E R+ P + + + + DP N F+ G Sbjct: 122 RTGTGVGQLGMTVEETRNTPNYFFGVHEVQSFLDARIFGTPLSGFISMDPNNYRAFSADG 181 Query: 479 ILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSPPPADKGQA-------------------- 517 + F + V ++ S+ M +MS A K +A Sbjct: 182 HVDFTRTNIILVVVPMMLVASVLMHFSARMSMDRAAKRRAENPIKANDPKAQQTQMQMDM 241 Query: 518 ---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 M+L MPV+++ ++ GL +Y + S +QQ + K AE + Sbjct: 242 MQKMMLWVMPVLYLMGGFAWQVGLALYMVTNMTWSYLQQFFLYKKMDAEDEAQKEAVAAA 301 Query: 575 SKNYNSQ 581 + + Sbjct: 302 KRTSAPK 308 >gi|73748802|ref|YP_308041.1| putative inner membrane protein, 60 kDa [Dehalococcoides sp. CBDB1] gi|289432822|ref|YP_003462695.1| membrane protein insertase, YidC/Oxa1 family [Dehalococcoides sp. GT] gi|73660518|emb|CAI83125.1| putative inner membrane protein, 60 kDa [Dehalococcoides sp. CBDB1] gi|288946542|gb|ADC74239.1| membrane protein insertase, YidC/Oxa1 family [Dehalococcoides sp. GT] Length = 315 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 7/226 (3%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W I PM M + +NL G+FG+ +++ TV ++L +PL +KQ +T M+ I + Sbjct: 7 WDLIILSPMINGMVWLSHNLWGSFGLTVIVLTVVIRLALWPLNRKQLTATKKMQEITVHM 66 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 D L++K Q L + ++LYK ++ P+L+Q P++ A+Y+ I L + Sbjct: 67 DALKKKHGND-RQKLAEEQMKLYKESGVSTTGCLVPMLIQFPIWIALYQAIVRVLAVTPE 125 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 F L + ++ + +++ L MF+Q KMS P A Q Sbjct: 126 DFMNLSNHLYSWPVVYETLPLSNNFLWMDLSRSDFVLALLVGLGMFVQQKMSTPKAINQQ 185 Query: 517 AM-----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + MP +F F SFP+GL YW S V+ I+ Q I Sbjct: 186 QAAQSQMLSFMMPFMFFFFSLSFPSGLAFYWFVSAVVGIIMQYFIT 231 >gi|330685212|gb|EGG96875.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU121] Length = 270 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 114/260 (43%), Gaps = 35/260 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----I 392 ++ +PM L+ F L N+G+AI+ + V+ + P Q + M+ + Sbjct: 30 FYNTFVQPMDRLLHLFGRLFNYNYGLAIIAIVLIVRFILLPFMLIQVKNMHIMREKTKVV 89 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYK 445 QP+ID++REK K++ Q + +++ YK + INP GC+P+++QIP+ +Y Sbjct: 90 QPQIDKIREKIKEADSQEERNAANQLLMKKYKQYGINPFKNIIGCFPVIIQIPILMGLYM 149 Query: 446 VI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + S + P + W +P + TL L + + ++ +P + ++ Sbjct: 150 SLKYPSSDGITKYPHFLWFN---LTEPNIMMTLIAALMYLIQPLVNSIHYPKNERKTYYV 206 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ P+ +A + L +YWS S I+Q + H A+ Sbjct: 207 ---------------MMILSPIFITYASLHSASALGLYWSLSAAFLIIQMHFAHR-HYAK 250 Query: 564 IGLID--RLRSTFSKNYNSQ 581 +G + +LR + ++ + Sbjct: 251 VGRSEAQQLRQSLEQHKEQR 270 >gi|76787971|ref|YP_330226.1| OxaA-like protein precursor [Streptococcus agalactiae A909] gi|76563028|gb|ABA45612.1| membrane protein [Streptococcus agalactiae A909] Length = 310 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 33/255 (12%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G + + PM L++YF G FG+AI++ TV V+++ PL Q M Sbjct: 34 YGVIWNTLGVPMANLITYFAQHQGLGFGVAIIIVTVIVRVVILPLGLYQSWKASYQAEKM 93 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +P + + E+ + + Q Q ++ + + ++ G C P+L+Q+P F AI Sbjct: 94 AYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGGIGCLPLLIQMPFFSAI 153 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + + + A F G + T I I+ + ++ Sbjct: 154 FFAARYTPGVSSATFLGLNLGQKSLTLTVIIA-------------------ILYFVQSWL 194 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M+ P + ++ MP++ VF S PA + +YW + SI+QQ V + + Sbjct: 195 SMQGVPDEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGIFSIIQQLVTT--YVLK 252 Query: 564 IGLIDRLRSTFSKNY 578 L ++ ++KN Sbjct: 253 PKLRRKVEEEYTKNP 267 >gi|291541858|emb|CBL14968.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Ruminococcus bromii L2-63] Length = 335 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 117/288 (40%), Gaps = 63/288 (21%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F F+ + ++ + L+ +FG++I++ T+ V+L FP KQ S A + K Sbjct: 3 IFGFLGSLLGYVLWGAFYLLKDFGLSIIVFTIIVRLCMFPFTIKQQKSMAGTARLSKKQK 62 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW----PILLQIPVFFAIYKVISISLEM 453 E++EK+K + Q Q+ + +LY+ + P GC P L+ VF+A+ ++ +L + Sbjct: 63 EIQEKYKNN-RQKAQEEISKLYEKEGVKPTGGCLTMIVPFLVLFGVFYAVAYPLTNTLHI 121 Query: 454 RHA--------------------------------------PFWGWIKDLAAADPTNI-- 473 A I+ + +AD N Sbjct: 122 DSAKVTEALNYVNTIPGYTAASGATNATYQEIYFLKDFSCFQNIDAIQQIFSADQLNTIT 181 Query: 474 -----FTLFGILPFYLPGFMHVGIWPII--------MSLSMFIQMKMS--PPPADKGQ-- 516 F FG+ F +P + I+ L+ FI M+++ P + Q Sbjct: 182 MFEKGFNTFGMNLFAIPQDYGLWSPMILFPVICFASNVLTQFITMRINGKNNPMQQQQGC 241 Query: 517 -AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +++ MP+ + P+ + YW S+++S+VQ ++ K+ + Sbjct: 242 MKVMMYAMPLFSAYIAYIVPSAVAFYWIVSSLVSLVQSVIVGKLFSPQ 289 >gi|22537748|ref|NP_688599.1| OxaA-like protein precursor [Streptococcus agalactiae 2603V/R] gi|38503010|sp|Q8DY84|OXAA2_STRA5 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|22534639|gb|AAN00472.1|AE014265_1 lipoprotein, putative [Streptococcus agalactiae 2603V/R] gi|319745517|gb|EFV97819.1| membrane protein [Streptococcus agalactiae ATCC 13813] Length = 310 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 33/255 (12%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G + + PM L++YF G FG+AI++ TV V+++ PL Q M Sbjct: 34 YGVIWNTLGVPMANLITYFAQHQGLGFGVAIIIVTVIVRVVILPLGLYQSWKASYQAEKM 93 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +P + + E+ + + Q Q ++ + + ++ G C P+L+Q+P F AI Sbjct: 94 AYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGGIGCLPLLIQMPFFSAI 153 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + + + A F G + T I I+ + ++ Sbjct: 154 FFAARYTPGVSSATFLGLNLGQKSLTLTVIIA-------------------ILYFVQSWL 194 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M+ P + ++ MP++ VF S PA + +YW + SI+QQ V + + Sbjct: 195 SMQGVPDEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGIFSIIQQLVTT--YVLK 252 Query: 564 IGLIDRLRSTFSKNY 578 L ++ ++KN Sbjct: 253 PKLRRKVEEEYTKNP 267 >gi|296141904|ref|YP_003649147.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella paurometabola DSM 20162] gi|296030038|gb|ADG80808.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella paurometabola DSM 20162] Length = 390 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 101/308 (32%), Gaps = 66/308 (21%) Query: 339 FYFIAKPMFMLMSYFYNLVG-----------NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ++ P+ +M ++ L + ++++ + ++ + + +Q +T Sbjct: 7 LDYVYYPVSGIMWVWHKLFSLIPGLGPDSGVTWALSVIFLVLTLRAILYKPFVRQIRTTR 66 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ QP++ LR+K+ + Q L M +L K H NPL GC P LLQ+PVF ++ V+ Sbjct: 67 QMQEFQPQMQALRKKYGKD-RQKLALEMQKLQKEHGFNPLLGCLPALLQVPVFIGLFHVL 125 Query: 448 SISLEMR-HAPFWGWIKDLAAADPTNIFTLFG---------------------------- 478 M A D+ A + + F Sbjct: 126 RSFNRMAGGATQMFGSPDMTAYETRHTANYFFSATDVQSFLDARLFGVPLSSYVQEPVAQ 185 Query: 479 ----------------------ILPFYLPGFMHVGIWPIIMSLSMFIQM---KMSPPPAD 513 IL +P + + + + + + P Sbjct: 186 FQAFMPVNINNDYIAPNFEKWQILALSVPLMIVAALATHFNARASIARQPVASLDNPQTA 245 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++L P+ + P ++IYW N+ + QQ ++ E RL Sbjct: 246 IMNRLMLWVFPIGVLVGGFFLPVAILIYWVTQNIWTYCQQHIVFGKLDKEDEEKKRLAQE 305 Query: 574 FSKNYNSQ 581 + Sbjct: 306 KRAENAPK 313 >gi|157149880|ref|YP_001449837.1| OxaA-like protein precursor [Streptococcus gordonii str. Challis substr. CH1] gi|157074674|gb|ABV09357.1| Membrane protein oxaA 2 precursor [Streptococcus gordonii str. Challis substr. CH1] Length = 310 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 103/254 (40%), Gaps = 33/254 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ Y F+ PM ++ YF + +G FG+AI+L TV V+L+ PL Q + Sbjct: 36 GFVYQFLVAPMSQVIKYFASDLGLGFGLAIILVTVIVRLIILPLGLYQSWNATYQSEKRN 95 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPLAG--CWPILLQIPVFFAIY 444 + P + E+ K + Q + A Q K + I+ L G C P+L+Q+P F A++ Sbjct: 96 YLSPIFTPINERMKNAETQEEKLAAQQALMAAQKENGISMLGGVGCLPLLIQMPFFSALF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + + F G + + I + + +Y+ + + Sbjct: 156 YAARYTKGIAESSFLG----INLGQQSMILIVVVGVLYYIQSLLSLVGL----------- 200 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + ++ P++ V + PAG+ +YW + I+QQ +I Sbjct: 201 ----DEEQKEQMKKMIYVSPLMIVIFSLTAPAGVTLYWVVGGFVQILQQFIIN--FFIRP 254 Query: 565 GLIDRLRSTFSKNY 578 + R+ + KN Sbjct: 255 YMKKRVAEEYEKNP 268 >gi|270308300|ref|YP_003330358.1| preprotein translocase YidC subunit [Dehalococcoides sp. VS] gi|270154192|gb|ACZ62030.1| preprotein translocase YidC subunit [Dehalococcoides sp. VS] Length = 315 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 7/226 (3%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W I PM M + +NL G+FG+ +++ TV ++L +PL +KQ +T M+ I + Sbjct: 7 WDLVILSPMINGMVWLSHNLWGSFGLTVIVLTVVIRLALWPLNRKQLTATKKMQEITVHM 66 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 + L++K Q L + ++LYK ++P P+L+Q P++ A+Y+ I L + Sbjct: 67 EALKKKHGND-RQKLAEEQMKLYKESGVSPTGCLVPMLIQFPIWIALYQAIVRVLAVTPE 125 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---- 512 F L + ++ + +++ +SM++Q KMS P A Sbjct: 126 DFMNLADHLYSWPVVYQTLPLSNHFLWMDLSLPDFALALLVGVSMYVQQKMSTPKAINQQ 185 Query: 513 -DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M+ MP +F F SFP+GL YW S ++ I+ Q I Sbjct: 186 QAAQGQMMSFMMPFMFFFFSLSFPSGLAFYWFVSAIVGIIMQYFIT 231 >gi|262282148|ref|ZP_06059917.1| membrane protein oxaA 2 [Streptococcus sp. 2_1_36FAA] gi|262262602|gb|EEY81299.1| membrane protein oxaA 2 [Streptococcus sp. 2_1_36FAA] Length = 310 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 103/254 (40%), Gaps = 33/254 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ Y F+ PM ++ YF + +G FG+AI+L TV V+L+ PL Q + Sbjct: 36 GFVYQFLVAPMSQVIKYFASDLGLGFGLAIILVTVIVRLIILPLGLYQSWNATYQSEKRN 95 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPLAG--CWPILLQIPVFFAIY 444 + P + E+ K + Q + A Q K + I+ L G C P+L+Q+P F A++ Sbjct: 96 YLSPIFTPINERMKNAETQEEKLAAQQALMAAQKENGISMLGGVGCLPLLIQMPFFSALF 155 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + + F G + + I + + +Y+ + + Sbjct: 156 YAARYTKGIAESSFLG----INLGQQSMILIVVVGVLYYIQSLLSLVGL----------- 200 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + ++ P++ V + PAG+ +YW + I+QQ +I Sbjct: 201 ----DEEQKEQMKKMIYVSPLMIVIFSLTAPAGVTLYWVVGGFVQILQQFIIN--FFIRP 254 Query: 565 GLIDRLRSTFSKNY 578 + R+ + KN Sbjct: 255 YMKKRVAEEYEKNP 268 >gi|315446823|ref|YP_004079702.1| preprotein translocase subunit YidC [Mycobacterium sp. Spyr1] gi|315265126|gb|ADU01868.1| preprotein translocase subunit YidC [Mycobacterium sp. Spyr1] Length = 371 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 98/265 (36%), Gaps = 48/265 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ +M +Y + +++M ++ + + KQ +T M Sbjct: 3 LDFIYYPVSAIMWVWYKAFAFLLGPTNFFAWALSVMFLVFTLRAILYKPFVKQIRTTRQM 62 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L++K+ + Q + M +L + H NP+ GC P+L Q+PVF +Y + Sbjct: 63 QELQPQIKALQKKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQVPVFLGLYHTLMS 121 Query: 450 SLEMRH---------------APFWGWIKDLAAADPTNIF------------TLFGILPF 482 + ++ D+ N+F L F Sbjct: 122 FNRTQTGIGRLGLSVEENRQLGNYFFSATDVQHFLDANLFGAPLGATMIQQHGLDAFTEF 181 Query: 483 YLPGFMHVG-IWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMPVVFVFAL 531 + VG I+ ++ + + SP A Q ++ P+ V Sbjct: 182 NRTSVIIVGVPIMILAGIATYFNSRASVARQSPEAAANPQTAMMNKLALYVFPLGVVVGG 241 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 P +I+YW +N+ + QQ + Sbjct: 242 PFLPLAIIMYWLANNIWTFGQQHYV 266 >gi|6117974|gb|AAF03934.1|AF139908_4 membrane protein homolog [Listeria monocytogenes] Length = 237 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 34/253 (13%) Query: 343 AKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMKNIQPKID 397 +P + + VG N+GIAI++TT+ ++ L PL K Q + M +P+ID Sbjct: 1 IQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEID 60 Query: 398 ELREKFK----QSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLE 452 E++ + K + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I S E Sbjct: 61 EIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSE 120 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + A +L + D M + I ++ L+ + + P Sbjct: 121 I--ASHTFLWFNLGSPD------------------MVLAIIAGLVYLAQYFVSMIGYSPE 160 Query: 513 DKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH---GAEIGLID 568 K Q I+ M P++ +F + P+ L +YW+ + Q + K++ EI +++ Sbjct: 161 QKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHPEIKVME 220 Query: 569 RLRSTFSKNYNSQ 581 + F + Q Sbjct: 221 QEEKEFEQIVEEQ 233 >gi|227549433|ref|ZP_03979482.1| inner membrane protein translocase component YidC [Corynebacterium lipophiloflavum DSM 44291] gi|227078510|gb|EEI16473.1| inner membrane protein translocase component YidC [Corynebacterium lipophiloflavum DSM 44291] Length = 325 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 109/302 (36%), Gaps = 65/302 (21%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ + G + +AI+ T +++L Q S M Sbjct: 2 LNFIYWPISAVLWFWHKIFGFIFAPDSGIAWILAIVFLTFTIRVLLVKPMVNQMRSMRRM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ E+R K+K Q + + +LYK NPLA C L+Q+PVF ++ V+ Sbjct: 62 QEMQPKMQEIRAKYKGD-QQKMAQETQKLYKEMGTNPLASCIVPLVQMPVFIGLFHVLRS 120 Query: 450 SLEMRHAP------------------------------FWGWIKDLAAADPTNIFTLFGI 479 P F+G + P + F+ F Sbjct: 121 FNRTGTGPGQLGMSVEQNRNTANYIFSPEDVRSFLDADFFGVPLSAYMSMPADAFSAFTG 180 Query: 480 LPFY-LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-------------------- 518 L F + + I+ ++ + ++S ++ +A Sbjct: 181 LDFTRVDIILVCMPLVILSAVFTHLNARLSIERQNERRAAGKVAAPVGDQAEMMQQQMQI 240 Query: 519 ----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 +L P++ + + + GL+ Y +NV + Q ++ E + + + Sbjct: 241 MNKMMLWVFPIMILASGFLWHVGLLFYMLANNVWTFFQTRIVFDKMDKEEAMEEEQKREA 300 Query: 575 SK 576 + Sbjct: 301 KR 302 >gi|313887656|ref|ZP_07821338.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846265|gb|EFR33644.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus harei ACS-146-V-Sch2b] Length = 244 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 19/230 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + FI + +M + F ++I++ TV +KLL PL Q + M +QP++ Sbjct: 11 FVKFIYDGLAAIMPQEPAAISFFALSIIIATVIIKLLILPLNISQMKNQKKMAKLQPELK 70 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA- 456 +++ K+K P Q L +LYK +N N + GC P++L + V A Y+V Sbjct: 71 KIQTKYKNDP-QTLAAKQQKLYKDNNYNMVGGCLPMVLTMVVLIAFYRVFLNPQTFAFTD 129 Query: 457 --------PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + +IK++ AD T I + + +L F+ + Sbjct: 130 PGFYEAMNKNFFYIKNIDHADKTLIMPVIAAVSTFLVSFI---------TTKNPATQGAG 180 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 A + ++ MP++ + AGL+IYW SN+ SIVQQ + K Sbjct: 181 ADQAKSMMSTMMVVMPILIFSMARKYAAGLVIYWIVSNIFSIVQQLITNK 230 >gi|227506191|ref|ZP_03936240.1| inner membrane protein translocase component YidC [Corynebacterium striatum ATCC 6940] gi|227197215|gb|EEI77263.1| inner membrane protein translocase component YidC [Corynebacterium striatum ATCC 6940] Length = 330 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 107/310 (34%), Gaps = 68/310 (21%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ L+ + ++I+L T +K + Q S+ M Sbjct: 2 LNFIYWPISAVLWFWHWLLSFVMDPAQGITWILSIVLLTWTLKAVMVKPTITQLRSSRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + IQP+I ELR K+ + Q M ++YK + P+AGC P+L QIP+F ++ V+ Sbjct: 62 QEIQPQIQELRTKYANDQTKAAQ-EMQRIYKESGVRPMAGCLPVLAQIPMFIGLFHVLRS 120 Query: 450 SL-------EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 + H D A IF + F V + + S Sbjct: 121 FDRTVQVAGGIGHPAGEPMSVDANANTANYIFKPELVQQFLDAKIFGVPLIANLRVNSPI 180 Query: 503 I-QMKMSPPP---------------------------------------------ADKGQ 516 + Q ++ + Q Sbjct: 181 LDQQGITMSQAAVIIVPLIVIIAVLTHFNARMSLNRQEARRASGKTAAPQGQNAEMMQQQ 240 Query: 517 A-----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 M+L MP + VF+ + +P GL+ Y + V + Q ++ K E + Sbjct: 241 MAIMNKMMLWVMPGMLVFSGAIWPIGLLFYMLANTVWTFFQTRIVYKKMDEEEERELAAK 300 Query: 572 STFSKNYNSQ 581 + + + Sbjct: 301 AELKRTSAPK 310 >gi|145347471|ref|XP_001418188.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] gi|144578417|gb|ABO96481.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] Length = 304 Score = 138 bits (348), Expect = 3e-30, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 25/240 (10%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + M YF+ G + +AI+ TVF++ + FPL Q +TA M+ +P+++ Sbjct: 36 WPTTAALMYAMEYFHVAHGLEWWLAIVGATVFMRTITFPLIVMQMRNTAKMQLCKPELEA 95 Query: 399 LREKFKQSPPQ------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 L+ K K +P Q K M +++K +++NP+ PIL+ PVF + + IS + Sbjct: 96 LQAKMKSNPQQDPELANAYYKEMQKVWKKYDVNPVKSFAPILINAPVFISFFFAISKMAQ 155 Query: 453 MRHAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + G DL+ ADPT + L F + ++ Sbjct: 156 GVPSFESGGPSMYPDLSMADPTYSLPILSSLTFLASVELGA--------------VEGMQ 201 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM-KMHGAEIGLID 568 L + V V +SFP G+ +YW SN+ S Q ++ K + +G+ D Sbjct: 202 TSQSAQMKWFLRALAVAMVPLTASFPQGVFVYWITSNIFSGFQTSITRTKAFKSTMGIPD 261 >gi|157114183|ref|XP_001652200.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes aegypti] gi|108877434|gb|EAT41659.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes aegypti] Length = 422 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 104/301 (34%), Gaps = 53/301 (17%) Query: 312 AKEFPTIHHYEKDLAI---PRFEMLIDWGW-FYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 P I +A P F L GW I + + +L + I + Sbjct: 90 PSAAPEISDLVSSVAANGEPTFASLGLGGWTPVGIVQNCMEFLHVGCDLP--WWGVIAIG 147 Query: 368 TVFVKLLFFPLAKKQYVSTANM-------KNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 T+ V+L+ FPL + A M + +Q K+ E R+ + M+ K Sbjct: 148 TICVRLVLFPLVIASQRNAAKMNNHMPQMQVLQMKMTEARQAGNSIDSARYAQEMVAFMK 207 Query: 421 THNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 N+NPL L Q P+F + ++ + +E W DL D Sbjct: 208 EKNLNPLKNMLVPLAQAPIFISFFMGLRQMANTPVESMREGGLFWFTDLTVCDQFYAL-- 265 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNW---MPVVFVFA 530 PII S++MF+ +++ S + + M+ MP+ Sbjct: 266 -----------------PIITSITMFLTIELGTDSARMSAQNMQMVRYVLRAMPLFIFPF 308 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIM-----------KMHGAEIGLIDRLRSTFSKNYN 579 +FP ++ YW+ SN S++Q + ++ + + + F++ Sbjct: 309 TINFPGAILCYWACSNFFSLLQVGFLRIPKVRDYFKIERLVTHKPETLPIKKKKFTEGMK 368 Query: 580 S 580 Sbjct: 369 D 369 >gi|223042607|ref|ZP_03612656.1| membrane protein OxaA 1 [Staphylococcus capitis SK14] gi|222444270|gb|EEE50366.1| membrane protein OxaA 1 [Staphylococcus capitis SK14] Length = 273 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 114/261 (43%), Gaps = 34/261 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN--- 391 G+FY KPM L+ + L N+G+AI++ + V+ + PL Q + M+ Sbjct: 29 GFFYNLFVKPMDSLLHFLGRLFNDNYGLAIIVIVLIVRFILLPLMVIQVKNMHMMREKTN 88 Query: 392 -IQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAI 443 ++P++D +REK K++ Q + +++ YK++ INP GC+P+++QIP+ + Sbjct: 89 VVKPELDAIREKIKKADTQEERNAANQLLMKKYKSYGINPFKNMIGCFPVIIQIPILMGL 148 Query: 444 YKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y + + P + W +P I T+ +++ ++ +P + Sbjct: 149 YMSLKYPTSDGITKYPHFLWFN---LTEPNLIMTIIAASMYFIQPLVNSIHYPKDQRKTY 205 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ I+ P+ +A + + L +YWS S IVQ + +G Sbjct: 206 YV---------------IMVVSPIFITYASLTSASALGLYWSISAAFLIVQMHLAHSYYG 250 Query: 562 AEIGLI-DRLRSTFSKNYNSQ 581 + +L+ N ++ Sbjct: 251 KQAKKEAAKLKDQLELNQANK 271 >gi|25029500|ref|NP_739554.1| putative inner membrane protein translocase component YidC [Corynebacterium efficiens YS-314] gi|259508318|ref|ZP_05751218.1| membrane protein OxaA [Corynebacterium efficiens YS-314] gi|23494789|dbj|BAC19754.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259164136|gb|EEW48690.1| membrane protein OxaA [Corynebacterium efficiens YS-314] Length = 316 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 113/303 (37%), Gaps = 61/303 (20%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ + + ++IM T V+++ S M Sbjct: 2 LNFIYWPISAILWFWHQVFSLVLSPDEGITWALSIMFLTFTVRVVLVKPMVNTMRSQRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS- 448 +++ P++ E+REK+K +++ +L K +NP+AGC P+L+QIPVF ++ V+ Sbjct: 62 QDMAPRMQEIREKYKNDQQKMMA-ESRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLRS 120 Query: 449 -----------------------ISLEMRHAPFWGWIKDLAAADPTNI------FTLFGI 479 ++ H + A I F F Sbjct: 121 FNRTGEGIGQLGMSIEENRNTPNYIFDVEHVQSFLAADLFGAPLSAYITMPEEAFAAFDF 180 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA---------------------M 518 L + +I+ ++ + ++S ++ + M Sbjct: 181 DVSRLNIALVAAPMILIIVVATHMNARLSVNRQEERKRSGKQVAPANDQMAMQMQMMNKM 240 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 +L +MP+ +F + GL+IY +NV + QQ I AE D L+ ++ Sbjct: 241 MLWFMPLTILFTGFIWTIGLLIYMMSNNVWTFFQQRYIFAKMDAEEAAEDELKKAAKRST 300 Query: 579 NSQ 581 + Sbjct: 301 APK 303 >gi|213581272|ref|ZP_03363098.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 215 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 72/232 (31%), Gaps = 33/232 (14%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTMQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVSTANNIELPNS--------NTVWNLISGKILTPTTPIKLVFKNANNILFER 170 Y A+ N + L G+ + + + +A F + Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQ---NELQVPMTYTDAAGNTFTK 163 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGV 216 T Y + +V N + S G++ + T ++ F + Sbjct: 164 TFVFKRGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFAL 215 >gi|314934498|ref|ZP_07841857.1| SpoJ family protein [Staphylococcus caprae C87] gi|313652428|gb|EFS16191.1| SpoJ family protein [Staphylococcus caprae C87] Length = 273 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 115/261 (44%), Gaps = 34/261 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN--- 391 G+FY KPM L+ + L N+G+AI++ + V+ + PL Q + M+ Sbjct: 29 GFFYNLFVKPMDSLLHFLGRLFNDNYGLAIIVIVLIVRFILLPLMVIQVKNMHMMREKTN 88 Query: 392 -IQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAI 443 ++P++D +REK K++ Q + +++ YK++ INP GC+P+++QIP+ + Sbjct: 89 VVKPELDAIREKIKKADTQEERNAANQLLMKKYKSYGINPFKNMIGCFPVIIQIPILMGL 148 Query: 444 YKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y + + P + W +P I T+ +++ ++ +P + Sbjct: 149 YMSLKYPTSDGITKYPHFLWFN---LTEPNLIMTIIAASMYFIQPLVNSIHYPKDQRKTY 205 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ I+ P+ +A + + L +YWS S IVQ + +G Sbjct: 206 YV---------------IMVVSPIFITYASLTSASALGLYWSISAAFLIVQMHLAHSYYG 250 Query: 562 AEIGLI-DRLRSTFSKNYNSQ 581 + +L++ N ++ Sbjct: 251 KQAKKEAAKLKNQLELNQANK 271 >gi|296875963|ref|ZP_06900022.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus parasanguinis ATCC 15912] gi|296433038|gb|EFH18826.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus parasanguinis ATCC 15912] Length = 305 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 101/252 (40%), Gaps = 31/252 (12%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + + +PM + +F NL FGI I++ T+ V+L+ PL Q + M + Sbjct: 37 IWNLLGRPMGEAIKFFANNLGLGFGIGIIIVTLIVRLIILPLGLYQSWKATYQSEKMNYL 96 Query: 393 QPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + ++E+ K + Q Q+ ++ + + ++ G C P+L+Q+P F A++ Sbjct: 97 KPILGPIQERMKNASTQEEKLLAQQELMAAQRENGVSMFGGVGCLPLLIQMPFFSALFFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G +A P+ + T + +Y+ + + Sbjct: 157 AQHTKGVAESSFLG----IALGKPSLLLTAIVAVLYYIQSMLSLHG-------------- 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + + P++ AG+ +YW VI I+QQ VI + L Sbjct: 199 IEDETQKESMRKASLMSPIMIGVFSLISSAGVTLYWVVGGVIQIIQQFVIN--YLIRPNL 256 Query: 567 IDRLRSTFSKNY 578 R+ + N Sbjct: 257 RKRVAEEYKNNP 268 >gi|312868335|ref|ZP_07728535.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parasanguinis F0405] gi|311096080|gb|EFQ54324.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parasanguinis F0405] Length = 294 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 101/252 (40%), Gaps = 31/252 (12%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + + +PM + +F NL FGI I++ T+ V+L+ PL Q + M + Sbjct: 26 IWDLLGRPMGEAIKFFANNLGLGFGIGIIIVTLIVRLIILPLGLYQSWKATYQSEKMNYL 85 Query: 393 QPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + ++E+ K + Q Q+ ++ + + ++ G C P+L+Q+P F A++ Sbjct: 86 KPILGPIQERMKNASSQEEKLLAQQELMAAQRENGVSMFGGVGCLPLLIQMPFFSALFFA 145 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G +A P+ + T + +Y+ + + Sbjct: 146 AQHTKGVADSNFLG----IALGKPSLLLTAIVAVLYYIQSMLSLHG-------------- 187 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + + P++ AG+ +YW VI I+QQ VI + L Sbjct: 188 IEDETQKESMRKASLMSPIMIGVFSLISSAGVTLYWVVGGVIQIIQQFVIN--YLIRPNL 245 Query: 567 IDRLRSTFSKNY 578 R+ + N Sbjct: 246 RKRVAEEYKNNP 257 >gi|169351635|ref|ZP_02868573.1| hypothetical protein CLOSPI_02416 [Clostridium spiroforme DSM 1552] gi|169291857|gb|EDS73990.1| hypothetical protein CLOSPI_02416 [Clostridium spiroforme DSM 1552] Length = 289 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 13/245 (5%) Query: 337 GWFYFI-AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 GWF F+ P+ + + VGN I ++ T+ V L+ P+ K VST ++ +QP+ Sbjct: 53 GWFDFLFVIPIAKGILFINQYVGNVAIGVIGVTIVVNLITLPIMVKSTVSTQKIQLLQPE 112 Query: 396 IDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +++++ K++ Q Q + LYK HN++ G + L +P+ A+++ + Sbjct: 113 MEKIQNKYRGRKDQASQMRQNAEIQNLYKKHNVSMF-GSFATFLTLPIMIAMWQAVQRID 171 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 + +G F++ I+ L I ++ + P Sbjct: 172 ILYKTSLFGINLGEKPISHIMEFSIEYIVLLLLVAVTQYFAVQISQIMAKR-SPRYRPSQ 230 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 + + N M + V+ ++ PA + +YW +N+I IV+ I H I++++ Sbjct: 231 QMQTMNTMNNVMTLFIVYLAATMPAAMSLYWITTNIIGIVRTVYIQFFH------IEKVK 284 Query: 572 STFSK 576 +K Sbjct: 285 KEVNK 289 >gi|307707578|ref|ZP_07644059.1| membrane protein OxaA 2 [Streptococcus mitis NCTC 12261] gi|307616291|gb|EFN95483.1| membrane protein OxaA 2 [Streptococcus mitis NCTC 12261] Length = 308 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 102/255 (40%), Gaps = 34/255 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 + W F A PM + YF G FG+AI++ T+ V+L+ PL Q + M Sbjct: 36 FIWNTFGA-PMAEAIKYFATDQGLGFGMAIIIVTIIVRLIILPLGIYQSWKATLHSEKMN 94 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++ ++ + + K++ Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 95 ALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A + G +P P + V ++ L + Sbjct: 155 FAAQHTEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLS 195 Query: 505 MKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + Q + P+ V PA + +YW + I+QQ ++ + Sbjct: 196 LHGVEDETQREQIKKMAYVSPITIVVFSLISPASVTLYWVVGGFMMILQQFIVN--YIVR 253 Query: 564 IGLIDRLRSTFSKNY 578 L ++R +KN Sbjct: 254 PKLRKKVREELAKNP 268 >gi|322390080|ref|ZP_08063615.1| SpoIIIJ family protein [Streptococcus parasanguinis ATCC 903] gi|321143207|gb|EFX38650.1| SpoIIIJ family protein [Streptococcus parasanguinis ATCC 903] Length = 305 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 101/252 (40%), Gaps = 31/252 (12%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + + +PM + +F NL FGI I++ T+ V+L+ PL Q + M + Sbjct: 37 IWNLLGRPMGEAIKFFANNLGLGFGIGIIIVTLIVRLIILPLGLYQSWKATYQSEKMNYL 96 Query: 393 QPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P + ++E+ K + Q Q+ ++ + + ++ G C P+L+Q+P F A++ Sbjct: 97 KPILGPIQERMKNASTQEEKLLAQQELMAAQRENGVSMFGGVGCLPLLIQMPFFSALFFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G +A P+ + T + +Y+ + + Sbjct: 157 AQHTKGVADSSFLG----IALGKPSLLLTAIVAVLYYIQSMLSLHG-------------- 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + + P++ AG+ +YW VI I+QQ VI + L Sbjct: 199 IEDETQKESMRKASLMSPIMIGVFSLISSAGVTLYWVVGGVIQIIQQFVIN--YLIRPNL 256 Query: 567 IDRLRSTFSKNY 578 R+ + N Sbjct: 257 RKRVAEEYKNNP 268 >gi|242372092|ref|ZP_04817666.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis M23864:W1] gi|242350204|gb|EES41805.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis M23864:W1] Length = 275 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 109/261 (41%), Gaps = 34/261 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN--- 391 G FY KPM L+ + L N+G+AI++ + V+ + PL Q + M+ Sbjct: 31 GIFYNTFVKPMDGLLHFLGRLFHDNYGLAIIVIVLIVRFILLPLMLIQVKNMHMMREKTK 90 Query: 392 -IQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAI 443 ++P++D +REK K + Q + +++ YK++ INP GC P+++QIP+ + Sbjct: 91 VVKPELDAIREKIKNADSQEERNAANQLLMKKYKSYGINPFKNMIGCLPVIIQIPILMGL 150 Query: 444 YKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y + + P + W +P I T+ +++ ++ +P + Sbjct: 151 YMSLKYPTSDGITKYPHFLWFN---LTEPNLIMTIIAASMYFIQPLVNSIHYPKDQRTTY 207 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ I+ P+ +A + + L +YWS S I+Q +G Sbjct: 208 YV---------------IMVVSPIFITYASLTSASALGLYWSISAGFLIIQMHFAHSYYG 252 Query: 562 A-EIGLIDRLRSTFSKNYNSQ 581 L+ ++N + Sbjct: 253 KLARQEAANLKKHLNQNQEKE 273 >gi|224087219|ref|XP_002308102.1| inner membrane protein [Populus trichocarpa] gi|222854078|gb|EEE91625.1| inner membrane protein [Populus trichocarpa] Length = 427 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 23/231 (9%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + ++ +N G N+ ++++TT+ ++ PL Q +T+ + ++P ++E++++ Sbjct: 127 LQYVIDAVHNFTGLNWWASMVVTTLLIRSAMLPLLINQLKATSKLSILRPHLEEVKQRVD 186 Query: 405 ---QSPPQVL--QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 P V QK M +L+K H ++P I +Q PVF + + IS E + Sbjct: 187 CQVMDPTAVSEGQKEMQKLFKEHGVSPFTPLKGIFIQGPVFISFFLAISNMAEKVPSFKS 246 Query: 460 G---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 G W DL D IF + L F ++++ Q M PA Sbjct: 247 GGAYWFVDLTTPDGLYIFPVLTALTF-------------LLTVECNTQEGMEGNPAAGTM 293 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 + + V V +FP + YW SN+ S+ V+ K G + L Sbjct: 294 KNVSRALAVASVPLTMNFPKAVFCYWVTSNLFSLAYGLVL-KAPGVKKFLR 343 >gi|322515972|ref|ZP_08068912.1| SpoIIIJ family protein [Streptococcus vestibularis ATCC 49124] gi|322125571|gb|EFX96906.1| SpoIIIJ family protein [Streptococcus vestibularis ATCC 49124] Length = 284 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 25/190 (13%) Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNIN 425 T+ ++ + PL +Q S+ ++ +QP++ L+ ++ + + L A +LYK H +N Sbjct: 77 FTILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYAQQELYKEHGVN 136 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P A P+++Q P+ A+Y ++ E+R DL DP I Sbjct: 137 PYASLLPLIIQFPILMALYGALTRVPELREGT--FLWVDLGQKDPYFIL----------- 183 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWM-PVVFVFALSSFPAGLIIYW 542 PI+ + F+ ++ A AM ++N M + + + +G+ +YW Sbjct: 184 --------PILAAAFTFLSTWLTNKAAKDRSAMLLVMNIMLSIFIFWFGTQISSGVALYW 235 Query: 543 SWSNVISIVQ 552 + SN +VQ Sbjct: 236 AVSNAFQVVQ 245 >gi|224541285|ref|ZP_03681824.1| hypothetical protein CATMIT_00445 [Catenibacterium mitsuokai DSM 15897] gi|224525789|gb|EEF94894.1| hypothetical protein CATMIT_00445 [Catenibacterium mitsuokai DSM 15897] Length = 293 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 100/237 (42%), Gaps = 13/237 (5%) Query: 337 GWFYFI-AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 G+F FI P+ + + GN ++L T+ + L+ P+ K +ST M+ +QP+ Sbjct: 53 GFFDFILTIPIAKGILLITSWTGNVLWGVILMTILINLIILPVMIKSTISTQKMQMLQPE 112 Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++ ++ K++ Q +Q ++ LYK +N++ W L +P+ FA+Y + Sbjct: 113 MERIQNKYRGKNDQTSQMRMQNEIMNLYKKNNVSMFGSLW-TFLTLPIMFAMYGAVQRIQ 171 Query: 452 EMRHAPFWGW---IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + +G + L+ + IL L F + I +L + K Sbjct: 172 ILYTSQAFGMNLGLTPLSQITSGKFIYIVVILVMALSQFFAI----EINNLMLKRNKKYK 227 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P + M ++ ++ P + YW +N+I++V+ I + + Sbjct: 228 PSAQQNQMKTMNIVMTLMIIYFGLIMPTAMSFYWITTNLITVVRTVFIQIQYIEKQE 284 >gi|116511365|ref|YP_808581.1| OxaA-like protein precursor [Lactococcus lactis subsp. cremoris SK11] gi|116107019|gb|ABJ72159.1| Preprotein translocase subunit YidC [Lactococcus lactis subsp. cremoris SK11] Length = 320 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 32/249 (12%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPK 395 + +PM + F N + +G I+ T+ ++ L PL Q M + P Sbjct: 48 LLVRPMSAFVDLFANNLHLGYGWGIIFVTLIIRFLILPLGLNQAYKSTYMQEKMAYLAPV 107 Query: 396 IDELREKFKQS----PPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVISI 449 L+E+ K++ Q+A++ K + IN L+ GC P+L+Q P F A+Y + Sbjct: 108 FAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSIGCLPMLIQWPFFIALYNAAAY 167 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + + F+G +P P + V I ++ + +I Sbjct: 168 TTGISSSTFYG-------------------IPLGHPSIVLVIISGVLYFIQTWISTLSMT 208 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P K +L P + V PAG+ +YW+ + ++QQ +I + + + R Sbjct: 209 PEQKKSGMAMLIMSPAMIVVFSFMSPAGVALYWAVGGFVIVIQQVIITFIM--KPRMRRR 266 Query: 570 LRSTFSKNY 578 + F+KN Sbjct: 267 IDEEFTKNP 275 >gi|125623406|ref|YP_001031889.1| OxaA-like protein precursor [Lactococcus lactis subsp. cremoris MG1363] gi|124492214|emb|CAL97143.1| Membrane protein oxaA 2 precursor [Lactococcus lactis subsp. cremoris MG1363] gi|300070153|gb|ADJ59553.1| OxaA-like protein precursor [Lactococcus lactis subsp. cremoris NZ9000] Length = 320 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 32/249 (12%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPK 395 + +PM + F N + +G I+ T+ ++ L PL Q M + P Sbjct: 48 LLVRPMSAFVDLFANNLHLGYGWGIIFVTLIIRFLILPLGLNQAYKSTYMQEKMAYLAPV 107 Query: 396 IDELREKFKQS----PPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVISI 449 L+E+ K++ Q+A++ K + IN L+ GC P+L+Q P F A+Y + Sbjct: 108 FAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSIGCLPMLIQWPFFIALYNAAAY 167 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + + F+G +P P + V I ++ + +I Sbjct: 168 TTGISSSTFYG-------------------IPLGHPSIVLVIISGVLYFIQTWISTLSMT 208 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P K +L P + V PAG+ +YW+ + ++QQ +I + + + R Sbjct: 209 PEQKKSGMAMLIMSPAMIVVFSFMSPAGVALYWAVGGFVIVIQQVIITFIM--KPRMRRR 266 Query: 570 LRSTFSKNY 578 + F+KN Sbjct: 267 IDEEFTKNP 275 >gi|149003816|ref|ZP_01828644.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69] gi|147758150|gb|EDK65153.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69] Length = 274 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 99/225 (44%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ F + F + + G+ I+L TV + + P+ + Q V++ M+ QP+I Sbjct: 37 FWSKLVYFFAKIIRFLSFDISIGVGIILFTVLICTVLLPVFQVQMVASRKMQEAQPRIKA 96 Query: 399 LREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LRE++ + L++ M +++K + WPIL+Q+PV A+++ +S ++ Sbjct: 97 LREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLK- 155 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + WI +L + D T + PI+ ++ F+ +S Sbjct: 156 TGHFLWI-NLGSVDTTLVL-------------------PILAAVFTFLSTWLSNKALSER 195 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 196 NGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240 >gi|312862441|ref|ZP_07722684.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus vestibularis F0396] gi|311102084|gb|EFQ60284.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus vestibularis F0396] Length = 284 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 25/190 (13%) Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-KQSPPQVLQKAMIQLYKTHNIN 425 T+ ++ + PL +Q S+ ++ +QP++ L+ ++ + + L A +LYK H +N Sbjct: 77 FTILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYAQQELYKEHGVN 136 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P A P+++Q P+ A+Y ++ E+R DL DP I Sbjct: 137 PYASLLPLIIQFPILMALYGALTRVPELREGT--FLWVDLGQKDPYFIL----------- 183 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWM-PVVFVFALSSFPAGLIIYW 542 PI+ + F+ ++ A AM ++N M + + + +G+ +YW Sbjct: 184 --------PILAAAFTFLSTWLTNKAAKDRSAMLLVMNIMLSIFIFWFGTQISSGVALYW 235 Query: 543 SWSNVISIVQ 552 + SN +VQ Sbjct: 236 AVSNAFQVVQ 245 >gi|300859524|ref|YP_003784507.1| hypothetical protein cpfrc_02107 [Corynebacterium pseudotuberculosis FRC41] gi|300686978|gb|ADK29900.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] Length = 318 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 103/282 (36%), Gaps = 68/282 (24%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ +V ++ +AIML T ++ Q S M Sbjct: 2 LNFIYWPISAILWFWHKVVSFVFDPGSGISWVLAIMLLTFTIRAFLVKPMLNQMRSARKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP + E+R+K+ + +++ ++ K +NP+AGC P L+Q+PVF ++ V+ Sbjct: 62 QELQPLMQEIRKKYGKDQQKMMA-ETRKVQKEVGVNPIAGCLPALVQMPVFIGLFHVLRS 120 Query: 450 SLEMRHAP---------------FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 + +D+ + IF + +P M+ P Sbjct: 121 FNRTGTGHSQLGLSVEVNRETPNYIFSAEDVQSFLDARIFGVPLSSYISMPADMYKAFQP 180 Query: 495 I----------------------------------------IMSLSMFIQMKMSPPPADK 514 I + + QM+M D Sbjct: 181 IDFTRVNIIAVAAPLILIIVVATHMNGRLSVNRQKARRESGLQAAPTSGQMQMQ---MDL 237 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M+L +MP+ +F + GL+ Y +N+ + QQ I Sbjct: 238 MNKMMLWFMPLTILFTGVLWHLGLLFYMVANNIWTFFQQRWI 279 >gi|886322|gb|AAB53138.1| ORF312; L222-ORF13; similar to C-terminal 60 kda inner membrane proteins of E. coli and Pseudomonas putida; putative [Mycobacterium leprae] Length = 312 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 103/292 (35%), Gaps = 48/292 (16%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQ 382 + D+ + P+ +M +Y L + +++M ++ L + +Q Sbjct: 4 LPFDFVSLDIVYYPVSWIMWVWYKLFAAVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQ 63 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 +T ++ +QP+I L+ K+ + Q + M +L + H NP+ GC P+L QIPVF Sbjct: 64 IRTTRQIEELQPRIRALQRKYGKD-RQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLG 122 Query: 443 IYKVISISLEMRHAPFWGWIK---------------DLAAADPTNIF------------T 475 +Y + + D+ N++ Sbjct: 123 LYHALRSFNRTTGGFGQPHMSVTENRMTGNYVFTPVDVGHFLDANLWGAPIGAYMTQRSG 182 Query: 476 LFGILPFYLPGFMHVG-IWPIIMSLSMFIQMKMS----------PPPADKGQAMILNWMP 524 L + F P + VG ++ ++ + + S P + L P Sbjct: 183 LDAFIDFSRPAVILVGIPMMVLAGVATYFNSRASIARQSAEAAENPQTALMNKIALYVFP 242 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 V P +I+YW +N+ + QQ + M E +R S + Sbjct: 243 FGVVVGGPFLPLAIILYWFSNNIWTFGQQHYVFSMIEKEDEAKNRKLSNVGR 294 >gi|302207207|gb|ADL11549.1| Inner membrane protein translocase component YidC [Corynebacterium pseudotuberculosis C231] gi|302331768|gb|ADL21962.1| Inner membrane protein translocase component YidC [Corynebacterium pseudotuberculosis 1002] gi|308277460|gb|ADO27359.1| Inner membrane protein translocase component YidC [Corynebacterium pseudotuberculosis I19] Length = 318 Score = 137 bits (344), Expect = 6e-30, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 103/282 (36%), Gaps = 68/282 (24%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ +V ++ +AIML T ++ Q S M Sbjct: 2 LNFIYWPISAILWFWHKVVSFVFDPGSGISWVLAIMLLTFTIRAFLVKPMLNQMRSARKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP + E+R+K+ + +++ ++ K +NP+AGC P L+Q+PVF ++ V+ Sbjct: 62 QELQPLMQEIRKKYGKDQQKMMA-ETRKVQKEVGVNPIAGCLPALVQMPVFIGLFHVLRS 120 Query: 450 SLEMRHAP---------------FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 + +D+ + IF + +P M+ P Sbjct: 121 FNRTGTGHSQLGLSVEVNRETPNYIFSAEDVQSFLDARIFGVPLSSYISMPADMYKAFQP 180 Query: 495 I----------------------------------------IMSLSMFIQMKMSPPPADK 514 + + + QM+M D Sbjct: 181 VDFTRVNIIAVAAPLILIIVVATHMNGRLSVNRQKARRESGLQAAPTSGQMQMQ---MDL 237 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M+L +MP+ +F + GL+ Y +N+ + QQ I Sbjct: 238 MNKMMLWFMPLTILFTGVLWHLGLLFYMVANNIWTFFQQRWI 279 >gi|25011697|ref|NP_736092.1| OxaA-like protein precursor [Streptococcus agalactiae NEM316] gi|38503012|sp|Q8E3U9|OXAA2_STRA3 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|24413237|emb|CAD47316.1| Unknown [Streptococcus agalactiae NEM316] Length = 310 Score = 137 bits (344), Expect = 6e-30, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 105/255 (41%), Gaps = 33/255 (12%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 +G + + PM L++YF G FG+AI++ T+ V+++ PL Q M Sbjct: 34 YGVIWNTLGVPMANLITYFAQHQGLGFGVAIIIVTIIVRVIILPLGLYQSWKASYQAEKM 93 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 +P + + E+ + + Q Q ++ + + ++ G C P+L+Q+P F AI Sbjct: 94 AYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGGIGCLPLLIQMPFFSAI 153 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + + + A F G + T I I+ + ++ Sbjct: 154 FFAARYTPGVSSATFLGLNLGQKSLTLTVIIA-------------------ILYFVQSWL 194 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M+ P + ++ MP+ VF S PA + +YW + SI+QQ V + + Sbjct: 195 SMQGVPDEQRQQMKTMMYVMPIAMVFMSISLPASVALYWFIGGIFSIIQQLVTT--YVLK 252 Query: 564 IGLIDRLRSTFSKNY 578 L ++ ++KN Sbjct: 253 PKLRRKVEEEYTKNP 267 >gi|255025839|ref|ZP_05297825.1| OxaA-like protein precursor [Listeria monocytogenes FSL J2-003] Length = 229 Score = 136 bits (343), Expect = 9e-30, Method: Composition-based stats. Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 33/237 (13%) Query: 358 GNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMKNIQPKIDELREKFK----QSPPQ 409 GN+GIAI++TT+ ++ L PL K Q + M +P+IDE++ + K + Sbjct: 9 GNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQA 68 Query: 410 VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I S E+ A +L + Sbjct: 69 TIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEI--ASHTFLWFNLGSP 126 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVF 527 D M + I ++ L+ + + P K Q I+ M P++ Sbjct: 127 D------------------MVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMI 168 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH---GAEIGLIDRLRSTFSKNYNSQ 581 +F + P+ L +YW+ + Q + K++ EI ++++ F + Q Sbjct: 169 LFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHPEIKVMEQEEKEFEQIVEEQ 225 >gi|218283269|ref|ZP_03489324.1| hypothetical protein EUBIFOR_01913 [Eubacterium biforme DSM 3989] gi|218215959|gb|EEC89497.1| hypothetical protein EUBIFOR_01913 [Eubacterium biforme DSM 3989] Length = 330 Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 107/250 (42%), Gaps = 18/250 (7%) Query: 330 FEMLIDWGWF-YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F+ + GWF I P+ +++ + + G+ I+LTT+ +++L F +K +ST Sbjct: 83 FKESMSKGWFEGLIVWPIAQIINLISSKT-DAGVGIILTTLLIQMLVFVFTRKSQMSTQR 141 Query: 389 MKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 M+ I P+I +++ K+K + + + M LY+ ++I+P +Q+P+ +Y Sbjct: 142 MQEISPEIQKIQNKYKDKTDERSKMQMAQEMQNLYQKYDIHPFGSMLITFIQLPIMMGMY 201 Query: 445 KVISISLEMRHAPFWG-----------WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 S+ + F G D+A + +F I+ LP ++ Sbjct: 202 YATMRSVSVVSGSFMGISLAGTPLDGFKALDIAYIAIYVLMVIFYIVSMKLPQWLKKWQD 261 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + + P A+ M + +M + S+P + YW S+VI + Q Sbjct: 262 KKDNVKVKKYAQEETNPMAN-SMNMSMYFMTAMICIMYISWPMAMSFYWLVSSVIRVCQS 320 Query: 554 AVIMKMHGAE 563 ++ ++ + Sbjct: 321 LILHQVMNKK 330 >gi|126438349|ref|YP_001074040.1| putative inner membrane protein translocase component YidC [Mycobacterium sp. JLS] gi|126238149|gb|ABO01550.1| 60 kDa inner membrane insertion protein [Mycobacterium sp. JLS] Length = 367 Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 95/271 (35%), Gaps = 48/271 (17%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQY 383 + +W I P+ +M +Y + +++M ++ + + +Q Sbjct: 1 MFNWFSLDIIYYPVSAIMWVWYKAFAFLLGPDNFFAWALSVMFLVFTLRAILYKPFVRQI 60 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +T M+ +QP+I L++K+ + Q + M +L K H NP+ GC P+L QIPVF + Sbjct: 61 RTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQKEHGFNPILGCLPMLAQIPVFLGL 119 Query: 444 YKVISISLEMRHA---------------PFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 Y V+ + + D+ N+F + Sbjct: 120 YHVLMSFNRTQTGIGRLGLSVEENRSLPNYLFSATDVGHFLDANLFGAPLGATMIQQHGL 179 Query: 489 HV-------------GIWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMPV 525 ++ ++ + +P A Q ++ P+ Sbjct: 180 EAFTEFNRVAVVVVGVPIMLLAGIATHFNSRASVARQTPEAAANPQTALMNKLALYVFPL 239 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V P +I+YW +N+ + QQ + Sbjct: 240 GVVVGGPFLPLAVIMYWLANNIWTYGQQHYV 270 >gi|327440675|dbj|BAK17040.1| preprotein translocase subunit YidC [Solibacillus silvestris StLB046] Length = 253 Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 38/248 (15%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN--- 391 G+FY +PM ++ F L G++G+AI+ + ++L+ P K Y S A MK Sbjct: 28 GFFYSTFVRPMDWTLNTFGELFNGSYGLAIIAIILIIRLVLMPFMLKTYRSQATMKVKMD 87 Query: 392 -IQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 ++P++++++ + K + +Q+ M+ LYK HNINPL GC P L+Q+P+ +Y Sbjct: 88 FVRPQMEDIQTRLKAAKTPEERMTVQQEMMSLYKEHNINPLNMGCLPALIQMPIIMGLYY 147 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E++ F + DL + D I + F+Q Sbjct: 148 AILYSAEIKTHSFLWF--DLGSTD---------------------IWMTAIAGVVYFVQA 184 Query: 506 KMS----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 K+S P +++ P++ V S A L +YW+ + IVQ + K Sbjct: 185 KVSLQTVPEAQKNQMKLMIYVSPIMIVIISLSSMAALPLYWAVGGLFLIVQTYIGRKFFS 244 Query: 562 AEIGLIDR 569 + Sbjct: 245 SIPETKGN 252 >gi|195326627|ref|XP_002030027.1| GM24796 [Drosophila sechellia] gi|194118970|gb|EDW41013.1| GM24796 [Drosophila sechellia] Length = 441 Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 93/260 (35%), Gaps = 27/260 (10%) Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTT 368 + + P F + GW + M + + + I + T Sbjct: 103 PPPTDGLNVIDVMNAAGEPSFASIGLGGWSP--VGMVQNCMEFLHCTWEIPWWGTIAIGT 160 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-------QVLQKAMIQLYKT 421 + V+ + FPL ++A M N P++ L+ K ++ + M+ + Sbjct: 161 LAVRTIIFPLVILAQRNSAKMNNNMPQMQMLQLKMTEARQSGNAIESARYAQEMMLFMRE 220 Query: 422 HNINPLAGCWPILLQIP----VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 +NPL L Q P F + ++ + +E W DL ADP + L Sbjct: 221 KGVNPLKNMVVPLAQAPLFISFFMGLRQMANAPVESMRDGGLFWFTDLTMADPYYLLPLI 280 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 YL + +G +S + +L +P+V +FPA Sbjct: 281 TSATLYLT--IEIGTDSARLSAAN-----------MNTMKYVLRALPIVIFPFTMNFPAA 327 Query: 538 LIIYWSWSNVISIVQQAVIM 557 ++ YW+ SN IS+ Q AV+ Sbjct: 328 ILTYWACSNFISLGQVAVLR 347 >gi|27468926|ref|NP_765563.1| lipoprotein precursor [Staphylococcus epidermidis ATCC 12228] gi|57865393|ref|YP_189577.1| hypothetical protein SERP2021 [Staphylococcus epidermidis RP62A] gi|251811869|ref|ZP_04826342.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis BCM-HMP0060] gi|282875157|ref|ZP_06284030.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis SK135] gi|293367134|ref|ZP_06613805.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|38502987|sp|Q8CMK4|OXAA1_STAES RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|81673373|sp|Q5HLG6|OXAA1_STAEQ RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|27316474|gb|AAO05649.1|AE016750_254 lipoprotein precursor [Staphylococcus epidermidis ATCC 12228] gi|57636051|gb|AAW52839.1| membrane protein, putative [Staphylococcus epidermidis RP62A] gi|251804666|gb|EES57323.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis BCM-HMP0060] gi|281295922|gb|EFA88443.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis SK135] gi|291318695|gb|EFE59070.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|329734603|gb|EGG70914.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU045] gi|329735021|gb|EGG71318.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU028] Length = 278 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 111/261 (42%), Gaps = 36/261 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN--- 391 G FY K M + + + N+G AI+ + V+ + P Q + M+ Sbjct: 29 GIFYNVFVKSMDGFLHFLGRVFQDNYGFAIISIVLIVRFILLPFMLIQVKNMHMMREKTK 88 Query: 392 -IQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAI 443 +QP++D +R+K K + Q + +++ Y+++ INPL GC P+L+Q+P+ + Sbjct: 89 VVQPELDAIRDKMKHATSQEERNAANQLLMKKYQSYGINPLKNMLGCLPVLIQMPILMGL 148 Query: 444 YKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y + S + P + W DL D I T+ + +++ ++ +P + Sbjct: 149 YMSLKYPSSHGITEYPHFLWF-DLTQPDL--IMTIIAAIMYFVQPLVNSIHYPKDQRKTY 205 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + ++ + P+ +A A L +YWS S IVQ H Sbjct: 206 YF---------------MMVFSPIFITYASLHSAAALGLYWSISAAFLIVQMHFAH-SHY 249 Query: 562 AEIGLID--RLRSTFSKNYNS 580 ++ L + +L+ +N ++ Sbjct: 250 KKVALHEAKKLKQKLEQNKDN 270 >gi|115757016|ref|XP_790253.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115961418|ref|XP_001176925.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 441 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 84/214 (39%), Gaps = 35/214 (16%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP-------PQVLQ 412 + +I++ T+ V+ FPL K T + N P ++ ++ + Sbjct: 165 WWASIVVGTLIVRACVFPLMLKNMKYTIRLNNCMPIFQKISKEMNDAKACGDQFEMTRKS 224 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468 + Q K +++NPL ILLQ P+F + ++ ++ +E W DL + Sbjct: 225 MELQQFMKKNDVNPLKSFAGILLQAPIFISFFIGLRRMATLPVESMQTGGLWWFTDLTTS 284 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-----PPPADKGQAMILNWM 523 DP P+I SLSMF+ M++ + +L M Sbjct: 285 DPYYAL-------------------PVIASLSMFLVMELGGEAGVSNAQAQKMRNVLRVM 325 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P V + ++S P + YW SN S+ Q ++ Sbjct: 326 PFVVLPFIASLPKAVFCYWLTSNFFSVFQVGLLK 359 >gi|172041701|ref|YP_001801415.1| putative inner membrane protein translocase component YidC [Corynebacterium urealyticum DSM 7109] gi|171853005|emb|CAQ05981.1| preprotein translocase YidC subunit [Corynebacterium urealyticum DSM 7109] Length = 324 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 115/311 (36%), Gaps = 69/311 (22%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ + G + ++I+ V +++L Q S+ M Sbjct: 2 LNFIYYPISAVLWFWHKVFGYVLDPTAGITWALSIVFLVVTIRILLVKPTANQLRSSRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + QPK+ EL+ K+ Q L + + + + P+A C P+L+Q+P+F ++ V+ Sbjct: 62 QEFQPKMKELQRKYAND-QQKLMVEVRKAQQEMGVRPMAACLPMLVQMPIFIGLFHVLRS 120 Query: 450 SL--------------EMRHAPF----------WGWIKDLAAADPTNI---------FTL 476 E R+ P + + A + I F+ Sbjct: 121 FNRTGTGTGQLGMSIEETRNTPNYVFGVEEVQSFLDARLFGAPLSSYISMDPSGYGAFSP 180 Query: 477 FGILPFYLPGFMHVGIWPIIMSLS--MFIQMKMSPPPADKGQA----------------- 517 GI P + + + P+++ + M ++S K QA Sbjct: 181 AGIAPDFTKANIIAVVLPLMLGAAVIMHFTARLSLNRNKKRQANNPKPAADDLKAQQMQM 240 Query: 518 -------MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 ++L +MP++ + + GL +Y + + + +QQ ++ + E + Sbjct: 241 QMDMMQRIMLWFMPLIILAGGFLWQVGLALYMFTNGLWTFIQQRILFGIMDKEEEEERQA 300 Query: 571 RSTFSKNYNSQ 581 + + + Sbjct: 301 KLEARRTSAPK 311 >gi|194868587|ref|XP_001972309.1| GG13956 [Drosophila erecta] gi|190654092|gb|EDV51335.1| GG13956 [Drosophila erecta] Length = 441 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 93/260 (35%), Gaps = 27/260 (10%) Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTT 368 + + P F + GW + + + + + I + T Sbjct: 103 PPPTDGLNVMDVMNAAGEPSFASIGLGGWSP--VGMVQNCLEFLHCTWDIPWWGTIAIGT 160 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-------QVLQKAMIQLYKT 421 + V+ + FPL ++A M N P++ L+ K ++ + M+ + Sbjct: 161 LAVRTIIFPLVILAQRNSAKMNNNMPQMQMLQLKMTEARQSGNAIESARYAQEMMLFMRE 220 Query: 422 HNINPLAGCWPILLQIP----VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 +NPL L Q P F + ++ + +E W DL ADP + L Sbjct: 221 KGVNPLKNMVVPLAQAPLFISFFMGLRQMANAPVESMRDGGLFWFTDLTLADPFYLLPLI 280 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 YL + +G +S + +L +P+V +FPA Sbjct: 281 TSATLYLT--IEIGTDSARLSAAN-----------MNTMKYVLRALPIVIFPFTMNFPAA 327 Query: 538 LIIYWSWSNVISIVQQAVIM 557 ++ YW+ SN IS+ Q AV+ Sbjct: 328 ILTYWACSNFISLGQVAVLR 347 >gi|39938735|ref|NP_950501.1| preprotein translocase subunit YidC [Onion yellows phytoplasma OY-M] gi|39721844|dbj|BAD04334.1| preprotein translocase subunit YidC [Onion yellows phytoplasma OY-M] Length = 525 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 116/258 (44%), Gaps = 33/258 (12%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 +G+F+ + + + +F + GN G+ I+L T+F++ L +P+ K Sbjct: 262 FGYFWNVLIISIGSFLYFFSTFLVSGASGMFFGNLGLGIVLATIFIRTLTWPIYTKTSTL 321 Query: 386 TANMKNIQPKIDELREKF--KQSP--PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 + NM IQP+I+++++K+ K+ P Q +Q ++++Y+ +N + G LQ+P+F Sbjct: 322 SMNMSLIQPEIEKVKQKYALKKDPASAQKMQLEILKVYRKNNFS-FWGFLLSFLQLPLFI 380 Query: 442 AIYKVISISLEMRH--------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV--- 490 AI + +S + + +L ++P N F +F +L F + M + Sbjct: 381 AINQTLSRFIIPGGIFATDKLIEKPFLGFINLNPSNPNNAFVIF-LLSFLVGATMFILNK 439 Query: 491 -----GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + S + + K ++K ++ +M ++ VF S P L +YW Sbjct: 440 ISFKKPDYLKTPSYYLTSEQKQKAKQSEKSMKIMSVFMILMMVFFSRSNPI-LSLYWIVG 498 Query: 546 NVISIVQQAVIMKMHGAE 563 N +I Q + K + Sbjct: 499 NTYTIFQTLLTRKKMQQK 516 >gi|326693242|ref|ZP_08230247.1| integral membrane protein [Leuconostoc argentinum KCTC 3773] Length = 304 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 108/254 (42%), Gaps = 35/254 (13%) Query: 341 FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVS----TANMKNIQ 393 +I +P+ +M+ +++G G AI++ T ++L+ P Q V+ M+ ++ Sbjct: 33 WIGQPLADIMANIAHVIGGVNGIGWAIIIITAILRLILLPFFLNQQVNTTINQIKMQKLK 92 Query: 394 PKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+ID+L+ +++ Q AM+ LY+ ++++ + G + +Q+PVF +Y I Sbjct: 93 PEIDKLQAISRKAGTSAEQQQASMAMMSLYRENDVSVIGGISFLTLAMQLPVFSGLYAAI 152 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ A F+G L+ P IF + + + + ++ V Sbjct: 153 LHAPALKGATFFG----LSLGQPQLIFAIAAGVVYLVQAWIAV---------------LR 193 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P K A ++ P++ + +Y+ + +++Q ++ H GL Sbjct: 194 MPEEQKKASATMMLISPIMIFVFAMIASGAIGLYFIVGGLFALLQSLIL---HFQRPGLE 250 Query: 568 DRLRSTFSKNYNSQ 581 R+ F + Sbjct: 251 KRVAREFKIKKTAD 264 >gi|332654814|ref|ZP_08420556.1| inner membrane protein OxaA [Ruminococcaceae bacterium D16] gi|332516157|gb|EGJ45765.1| inner membrane protein OxaA [Ruminococcaceae bacterium D16] Length = 401 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 61/284 (21%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 I KP L+ +FYN ++GIA++L + VKL+ FPL+ K S M + K+ +L Sbjct: 2 GIILKPFAWLLLFFYNFFSSYGIALILFALVVKLILFPLSLKGKKSMIKMNLLSGKMQQL 61 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-------- 451 ++++ + + Q + +LY+ +NP+ GC L + + +Y +I L Sbjct: 62 QKQYGKD-RERYQMEVQKLYEREKVNPMGGCLWSFLPLFILIPLYYIIREPLTYLMDVPK 120 Query: 452 -------EMRHAPFWGWIKDLAAAD----------------------------------- 469 E+ G +A A+ Sbjct: 121 DAIAKIAEITGIANTGAYPQIAMAEALNKDGMLAQVQAALGDAGNGLFNLDFHFLGINLA 180 Query: 470 --PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ--------AMI 519 P F G+ + F+ + ++ LSM I +K + ++ Q + Sbjct: 181 DIPQWNFWANGLSWESIGLFLLPLVSVVMSLLSMQISLKTNQMSRNQAQDEATAKTNRTM 240 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + MP++ ++ + PAGL IYW SI Q+ + K+ + Sbjct: 241 MIMMPLMSLWIGFTVPAGLSIYWIAQYFFSIFQELICGKLLKKD 284 >gi|213400725|gb|ACJ47011.1| hypothetical protein [Wolbachia endosymbiont of Coptotermes acinaciformis] Length = 171 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 63/172 (36%), Positives = 96/172 (55%), Gaps = 3/172 (1%) Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275 EG I D L E Y D+ K + S +W G +DKYW + IP K + Sbjct: 1 HEGVIGAF-DNKLEEWTYKDVAKKHLIKTSTSEKNWFGFADKYWLTAIIPEKSDKINVSI 59 Query: 276 KYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 K+ + + ++Q F +ILPG S++ N+ FAGAK+ + Y+ L IP F+ + Sbjct: 60 KHTNVNNIDKFQVDFVKPYKSILPGTSVSNVNYFFAGAKKLNLLDSYKSTLGIPLFDKAV 119 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 D+G YFI KP+F+L+ YF+ ++ NFG+AI+L T+ +KLL L+ + YVS Sbjct: 120 DFGVLYFITKPVFLLLEYFHFVLKNFGLAILLLTLVIKLLMLTLSNRSYVSM 171 >gi|194751063|ref|XP_001957846.1| GF23816 [Drosophila ananassae] gi|190625128|gb|EDV40652.1| GF23816 [Drosophila ananassae] Length = 448 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 94/253 (37%), Gaps = 27/253 (10%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLF 375 + + P F + GW + M + + + AI + T+ V+ + Sbjct: 117 ELVNLVNASGEPTFASIGLGGWSP--VGIVQNCMEFLHCTWELPWWGAIAVGTLVVRTII 174 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-------QVLQKAMIQLYKTHNINPLA 428 FPL ++A M N P++ L+ K ++ + M+ + +NPL Sbjct: 175 FPLVILAQRNSAKMNNNMPQMQLLQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLK 234 Query: 429 GCWPILLQIP----VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 L Q P F + ++ + ++ W DL ADP + L YL Sbjct: 235 NMVVPLAQAPLFISFFMGLRQMANTPVDSMRDGGLFWFTDLTLADPLYLLPLITSATLYL 294 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 + +G +S + +L +P+V +FPA ++ YW+ Sbjct: 295 T--IEIGTDSARLSAAN-----------MNTMKYVLRALPIVIFPFTMNFPAAILTYWAC 341 Query: 545 SNVISIVQQAVIM 557 SN IS+ Q A++ Sbjct: 342 SNFISLGQVALLR 354 >gi|312865633|ref|ZP_07725857.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei F0415] gi|311098754|gb|EFQ56974.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei F0415] Length = 266 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 30/244 (12%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW + + + + G+ GI I+L T+ V+L PL +Q S+ M+ +QP++ Sbjct: 32 GWDQ-LVYGFGRAIQWL-SFGGSVGIGIILITLIVRLALVPLYNRQMKSSREMQELQPEL 89 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +++++ K +LYK + +N A PIL+Q+PV A+Y+ + + Sbjct: 90 KRIQKEYADDRNLQYAK-TQELYKENGVNQWAAFLPILIQLPVMMALYQALIRVPALSQG 148 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 F W +L D T I PI+ + F+ M +S + Sbjct: 149 NFLIW--NLGKNDGTFIL-------------------PILAAFFTFLSMWLSNKATKEKN 187 Query: 517 AMIL---NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 A + MP+ + + F +G+ +YW+ N + Q + H + +R R Sbjct: 188 AFMTATSIIMPLFIFWIGTRFTSGIALYWAIGNAFQVAQVLI---FHNPFKIIAERERKE 244 Query: 574 FSKN 577 + Sbjct: 245 ALEK 248 >gi|213400727|gb|ACJ47012.1| hypothetical protein [Wolbachia endosymbiont of Cordylochernes scorpioides] Length = 171 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 64/169 (37%), Positives = 95/169 (56%), Gaps = 3/169 (1%) Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275 EG + D L E Y DI K + S +W G +DKYW + IP K + Sbjct: 1 HEGVLGAF-DNKLEEWTYKDIAKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSI 59 Query: 276 KYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 K+ + + ++QA F ILPG S++ N+ FAGAK+ + HY+ L IP F+ + Sbjct: 60 KHTNVNDIDKFQADFVKPYKNILPGASVSNVNYFFAGAKKLNLLDHYKSALNIPLFDKAV 119 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 D+G YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + Y Sbjct: 120 DFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSY 168 >gi|309379511|emb|CBX21877.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 250 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 71/235 (30%), Gaps = 19/235 (8%) Query: 1 MERNWNY-FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ F AIAL+++I W+ + P+ + Q + A Sbjct: 1 MDFKRLTAFFAIALAIMI--GWEKMFPAPQTAPAPGQAAQQQRQTVATASAEAALAPATP 58 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + ++ I+ K L L Y + P V L + Sbjct: 59 -----------ITVTTDAVQAVIDEKSGDLRRLTLLKYKATGDEHKPFV--LFGDGKEYT 105 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + + N L + ++L N + ++ + Y Sbjct: 106 YVAQSELLDAQGNNVLKGIGFTAPQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKGSY 165 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVE 231 L + + N S RI+R + Q + + G + ++ L + Sbjct: 166 LVNVRFDIANTGGKPANLSADYRIVRDRSQPEGQGYFTRSYLGPVVYTPERRLPK 220 >gi|77408490|ref|ZP_00785228.1| SpoIIIJ family protein [Streptococcus agalactiae COH1] gi|77172932|gb|EAO76063.1| SpoIIIJ family protein [Streptococcus agalactiae COH1] Length = 266 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 32/244 (13%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNIQPKIDELR 400 M L++YF G FG+AI++ TV V+++ PL Q M +P + + Sbjct: 1 MANLITYFAQHQGLGFGVAIIIVTVIVRVVILPLGLYQSWKASYQAEKMAYFKPLFEPIN 60 Query: 401 EKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISISLEMR 454 E+ + + Q Q ++ + + ++ G C P+L+Q+P F AI+ + + Sbjct: 61 ERLRNAKTQEEKLAAQTELMTAQRENGLSMFGGIGCLPLLIQMPFFSAIFFAARYTPGVS 120 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 A F G L + I T+ + +++ + + M+ P + Sbjct: 121 SATFLG----LNLGQKSLILTVIIAILYFVQSW---------------LSMQGVPDEQRQ 161 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MP++ VF S PA + +YW + SI+QQ V + + L ++ + Sbjct: 162 QMKTMMYLMPIMMVFMSISLPASVALYWFIGGIFSIIQQLVTT--YVLKPKLRRKVEEEY 219 Query: 575 SKNY 578 +KN Sbjct: 220 TKNP 223 >gi|195493250|ref|XP_002094335.1| GE20254 [Drosophila yakuba] gi|194180436|gb|EDW94047.1| GE20254 [Drosophila yakuba] Length = 441 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 93/260 (35%), Gaps = 27/260 (10%) Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTT 368 + + P F + GW + M + + + I + T Sbjct: 103 PPPTDGLNVLDVVNAAGEPSFASIGLGGWSP--VGMVQNCMEFLHCTWDIPWWGTIAIGT 160 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-------QVLQKAMIQLYKT 421 + V+ + FPL ++A M N P++ L+ K ++ + M+ + Sbjct: 161 LAVRTIIFPLVILAQRNSAKMNNNMPQMQMLQLKMTEARQSGNAIESARYAQEMMLFMRE 220 Query: 422 HNINPLAGCWPILLQIP----VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 +NPL L Q P F + ++ + +E W DL ADP + + Sbjct: 221 KGVNPLKNMVVPLAQAPLFISFFMGLRQMANAPVESMRDGGLFWFTDLTLADPFYLLPMI 280 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 YL + +G +S + +L +P+V +FPA Sbjct: 281 TSATLYLT--IEIGTDSARLSAAN-----------MNTMKYVLRALPIVIFPFTMNFPAA 327 Query: 538 LIIYWSWSNVISIVQQAVIM 557 ++ YW+ SN IS+ Q AV+ Sbjct: 328 ILTYWACSNFISLGQVAVLR 347 >gi|224053781|ref|XP_002297976.1| inner membrane protein [Populus trichocarpa] gi|222845234|gb|EEE82781.1| inner membrane protein [Populus trichocarpa] Length = 459 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 89/221 (40%), Gaps = 22/221 (9%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF + ++ ++ G N+ +I++TT+ ++ PL Q +T + ++P ++E Sbjct: 139 YFPVAALQHVIDAVHSFTGFNWWASIIVTTLLIRGATVPLLINQLKATTKLTLMRPHLEE 198 Query: 399 LREKFKQSPPQVL-----QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +R++ + QK M +L+K + ++PL + +Q P+F + + IS E Sbjct: 199 IRQQMSDKAMDPMALAEGQKQMKKLFKEYGVSPLTPLKGLFIQGPIFVSFFLAISNMTEK 258 Query: 454 RHAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + G W DL D I + L F++ + +Q + Sbjct: 259 VPSFKSGGAYWFLDLTTPDSLYILPILTGLTFWITVECN-------------MQEGLEGN 305 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 P + V V FP + YW SN+ S+ Sbjct: 306 PIAATMKKVSRVFAVASVPLTMGFPNAIFCYWVTSNLFSLF 346 >gi|198465469|ref|XP_001353642.2| GA19566 [Drosophila pseudoobscura pseudoobscura] gi|198150173|gb|EAL31156.2| GA19566 [Drosophila pseudoobscura pseudoobscura] Length = 438 Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 87/220 (39%), Gaps = 25/220 (11%) Query: 350 MSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 M + + + AI + T+ V+ + FPL ++A M N P++ L+ K ++ Sbjct: 139 MEFLHCTWELPWWGAIAVGTLVVRTIIFPLVILAQRNSAKMNNNMPQMQLLQLKMTEARQ 198 Query: 409 -------QVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIYKVISISLEMRHAP 457 + M+ + +NPL L Q P F + ++ + ++ Sbjct: 199 SGNAIESARYAQEMMLFMRDKGVNPLKNMIVPLAQAPLFISFFMGLRQMANTPVDSMRDG 258 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 W +DL ADP I L YL + +G +S + Sbjct: 259 GLWWFQDLTLADPFYILPLITSATLYLT--IEIGTDSARLSAAN-----------MNTMK 305 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +L +P+V +FPA ++ YW+ SN IS+ Q AV+ Sbjct: 306 YVLRALPLVIFPFTMNFPAAILTYWACSNFISLGQVAVLR 345 >gi|328946838|gb|EGG40975.1| SpoIIIJ family protein [Streptococcus sanguinis SK1087] gi|332362242|gb|EGJ40042.1| SpoIIIJ family protein [Streptococcus sanguinis SK1056] Length = 307 Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 98/252 (38%), Gaps = 30/252 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I +PM + +F G +G+AI++ T+ V+++ PL Q + M Sbjct: 36 IWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYF 95 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P ++E+ K + Q Q+ ++ K + ++ G C P+L+Q+P F A++ Sbjct: 96 KPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFA 155 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + WIKDLA +D T + +Y+ + + Sbjct: 156 AQYTQGVAGSS-FLWIKDLAKSDWA--LTAIVGILYYIQSVLSLHG-------------- 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + P++ V PA + +YW I I+ + + L Sbjct: 199 IEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINYIIRPRL 256 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 257 RKQVAEEFEKNP 268 >gi|213400711|gb|ACJ47004.1| hypothetical protein [Wolbachia endosymbiont of Nasonia vitripennis] Length = 171 Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats. Identities = 64/172 (37%), Positives = 95/172 (55%), Gaps = 3/172 (1%) Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275 EG + D L E Y DI K + S +W G +DKYW + IP K + Sbjct: 1 HEGVLGAF-DNKLEEWTYKDISKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSI 59 Query: 276 KYLSDGH-ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 K+ + ++Q F + +ILPG S + N+ FAGAK+ + Y+ L IP F+ + Sbjct: 60 KHTNANDIDKFQVDFVKSYKSILPGASTSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAV 119 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 D+G YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + YVS Sbjct: 120 DFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVSM 171 >gi|195442310|ref|XP_002068901.1| GK18022 [Drosophila willistoni] gi|194164986|gb|EDW79887.1| GK18022 [Drosophila willistoni] Length = 469 Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 87/220 (39%), Gaps = 25/220 (11%) Query: 350 MSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 M + + + AI + T+ V+ L FPL ++A M N P++ L+ K ++ Sbjct: 144 MEVLHCSWDIPWWGAIAIGTLVVRTLIFPLVIVAQRNSAKMSNNMPQMQLLQLKMTEARQ 203 Query: 409 -------QVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIYKVISISLEMRHAP 457 + M+ + +NPL L Q P F + ++ + +E Sbjct: 204 SGNAIESARYAQEMMLFMREKGVNPLKNMVVPLAQAPLFISFFMGLRQMANAPVESMRDG 263 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 W +DL ADP + L YL + +G +S + Sbjct: 264 GLWWFQDLTLADPFYLLPLITSATLYLT--IEIGTDSARLSAAN-----------MNTMK 310 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +L +P+V +FP+ ++ YW+ SN IS+ Q A++ Sbjct: 311 YVLRALPLVIFPFTMNFPSAILTYWACSNFISLGQVAILR 350 >gi|170052227|ref|XP_001862125.1| inner membrane protein oxa1-1, mitochondrial [Culex quinquefasciatus] gi|167873150|gb|EDS36533.1| inner membrane protein oxa1-1, mitochondrial [Culex quinquefasciatus] Length = 419 Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 103/284 (36%), Gaps = 50/284 (17%) Query: 326 AIPRFEMLIDWGW-FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 A P F L GW + + + +L + I + TV V++L FPL Sbjct: 104 AEPTFASLGLGGWSPVGMVQNCMEFLHITADLP--WWGCIAIGTVCVRMLLFPLVIASQR 161 Query: 385 STANM-------KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 + A M + +Q K+ E R+ + M+Q K ++NPL L Q Sbjct: 162 NAAKMNNNMPQMQVLQMKMTEARQAGNAIDSARYAQEMVQFMKEKDLNPLKNMLVPLAQA 221 Query: 438 PVFF----AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 P+F + ++ ++ ++ W DL D Sbjct: 222 PIFISFFMGLRQMANVPVDSLREGGLFWFPDLTICDQFYAL------------------- 262 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMI------LNWMPVVFVFALSSFPAGLIIYWSWSNV 547 PII S++MF+ +++ A A + L MP+ + +FP + +YW +SN Sbjct: 263 PIITSITMFLTIELGTDSARMSAANMQTVRYVLRAMPLFILPFTINFPGAICLYWVFSNF 322 Query: 548 ISIVQQAVIM-----------KMHGAEIGLIDRLRSTFSKNYNS 580 S+VQ + ++ + + + F++ Sbjct: 323 FSLVQVGFLRIPAVRDYFKIDRLITHKPETLPIKKKKFAEGVKE 366 >gi|301121274|ref|XP_002908364.1| mitochondrial inner membrane protein OXA1 [Phytophthora infestans T30-4] gi|262103395|gb|EEY61447.1| mitochondrial inner membrane protein OXA1 [Phytophthora infestans T30-4] Length = 371 Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 100/247 (40%), Gaps = 28/247 (11%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F + D G Y ++ + ++ G + I+ TTV V+ +FFP+ + A Sbjct: 62 FASVSDLG--YSLSDMAIRSLDVIHSTTGLPWWATIIATTVAVRTVFFPVTVISMRNAAK 119 Query: 389 MKNIQPKIDELREKFKQSPPQ------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 MK QP +++L+ + +P Q Q L K H++NP L QIPVF Sbjct: 120 MKLFQPDMEKLKAQMDANPTQSPESTKEFQTKYKALMKKHDVNPFKSVLTPLSQIPVFLG 179 Query: 443 IYKVI---SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 + + S GW+ DL+ ADPT + +M+ Sbjct: 180 FFWGLQDISKYFPEYAHEGIGWVPDLSVADPTLALPVISSA---------------LMAA 224 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 S+ + + + ++ V +F +G+ +YW SN+ ++ Q A +M++ Sbjct: 225 SVELGGDAMGGDMQRNLKFGMRCFALMMVPLTMNFQSGIFVYWVTSNMFTLTQTA-LMRL 283 Query: 560 HGAEIGL 566 + + L Sbjct: 284 NVVKRAL 290 >gi|237738569|ref|ZP_04569050.1| inner membrane protein YIDC [Fusobacterium sp. 2_1_31] gi|229424052|gb|EEO39099.1| inner membrane protein YIDC [Fusobacterium sp. 2_1_31] Length = 206 Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 23/206 (11%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 VGNFG++I++ T+ +K+ PL KQ S MK IQP++++L+EK+ Q+L Sbjct: 21 KYVGNFGVSIIIVTILIKIALLPLTLKQDKSMKEMKKIQPELEKLKEKYANDK-QMLNIK 79 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 ++LYK H +NPL GC P+LLQ+P+ FA++ V+ + + F L +P F Sbjct: 80 TMELYKEHKVNPLGGCLPLLLQLPILFALFGVLRSGIIPADSSFLW----LKLPEPDPFF 135 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 L P++ F Q K+ ++ ++ P++ +F Sbjct: 136 VL-----------------PVLNGAVSFFQQKLMGSADSNPQMKNMMYIFPIMMIFISYR 178 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKM 559 P+GL +YW S+++++VQQ IMK Sbjct: 179 MPSGLQLYWLTSSILAVVQQYFIMKK 204 >gi|242243775|ref|ZP_04798219.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis W23144] gi|242232778|gb|EES35090.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis W23144] Length = 278 Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 111/261 (42%), Gaps = 36/261 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN--- 391 G FY K M + + + N+G AI+ + V+ + P Q + M+ Sbjct: 29 GIFYNVFVKSMDEFLHFLGRVFQDNYGFAIISIVLIVRFILLPFMLIQVKNMHMMREKTK 88 Query: 392 -IQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAI 443 +QP++D +R+K K + Q + +++ Y+++ INPL GC P+L+Q+P+ + Sbjct: 89 VVQPELDAIRDKMKHATSQEERNAANQLLLKKYQSYGINPLKNMLGCLPVLIQMPILMGL 148 Query: 444 YKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y + S + P + W DL D I T+ + +++ ++ +P + Sbjct: 149 YMSLKYPSSHGITEYPHFLWF-DLTQPDL--IMTIIAAIMYFVQPLVNSIHYPKDQRKTY 205 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + ++ + P+ +A A L +YWS S IVQ H Sbjct: 206 YF---------------MMVFSPIFITYASLHSAAALGLYWSISAAFLIVQMHFAH-SHY 249 Query: 562 AEIGLID--RLRSTFSKNYNS 580 ++ L + +L+ F + ++ Sbjct: 250 KKVALHEAKKLKQKFEHHKDN 270 >gi|325696358|gb|EGD38249.1| SpoIIIJ family protein [Streptococcus sanguinis SK160] Length = 296 Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 98/252 (38%), Gaps = 30/252 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I +PM + +F G +G+AI++ T+ V+++ PL Q + M Sbjct: 25 IWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYF 84 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P ++E+ K + Q Q+ ++ K + ++ G C P+L+Q+P F A++ Sbjct: 85 KPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFA 144 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + WIKDLA +D T + +Y+ + + Sbjct: 145 AQYTQGVAGSS-FLWIKDLAKSDLA--LTAIVGILYYIQSVLSLHG-------------- 187 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + P++ V PA + +YW I I+ + + L Sbjct: 188 IEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINYIIRPRL 245 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 246 RKQVAEEFEKNP 257 >gi|196003362|ref|XP_002111548.1| hypothetical protein TRIADDRAFT_23561 [Trichoplax adhaerens] gi|190585447|gb|EDV25515.1| hypothetical protein TRIADDRAFT_23561 [Trichoplax adhaerens] Length = 305 Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 97/238 (40%), Gaps = 26/238 (10%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + + ++ VG + +IM+ T ++ L PL + Y ++A M NI P + L K + Sbjct: 41 LQHAIDSLHSYVGLPWWGSIMVATAILRALTLPLVVRSYRNSARMNNISPTVSRLMNKMR 100 Query: 405 QSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHA 456 +P Q + + L++ HN NP LLQ+PVF + ++ + LE Sbjct: 101 AAPTQQEAALYSQELRLLFQKHNCNPFKSLISPLLQVPVFISFFLGLRRMCTAPLESMKD 160 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 W DL AADP + + + L + + + MK+ Sbjct: 161 GGMYWFTDLTAADPYYVLPVLSCVTMLLTLELGTEVGARNSGMQQQATMKV--------M 212 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ ++ + + + FP + YW SN S++Q ++ R+R +F Sbjct: 213 KIVFRFLAIGMLPVTAQFPTAIFCYWLTSNSCSMLQMVILN---------TPRIRKSF 261 >gi|116618818|ref|YP_819189.1| preprotein translocase subunit YidC [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097665|gb|ABJ62816.1| Preprotein translocase subunit YidC [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 307 Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 104/248 (41%), Gaps = 35/248 (14%) Query: 341 FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVS----TANMKNIQ 393 +I +P+ LM+ + +G G AI++ T +L+ P Q V+ M+ ++ Sbjct: 33 WIGQPLAELMTNIAHFIGGVNGIGWAIIVITAIFRLILLPFFLNQQVNTTVNQIKMQKLK 92 Query: 394 PKIDELR----EKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+ID+L+ + Q AM+ LY+ ++++ + G + +Q+P+F +Y I Sbjct: 93 PEIDKLQTLSRKAATTEEQQKASMAMMSLYRENDVSVIGGISFLTMAMQLPIFSGLYSAI 152 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ A F G+ DL P +F + + + + + + M+ Sbjct: 153 LHAPALQGASFLGF--DLGK--PQLVFAIVAGIIYLIQAW---------------LMMQH 193 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P K A ++ P++ + +Y+ + +++Q + H GL Sbjct: 194 MPEEQRKTSAAMMFVSPIMIFVFAMIASGAIGLYFVIGGIFALIQTLI---QHYQRPGLE 250 Query: 568 DRLRSTFS 575 R+ + F Sbjct: 251 KRVTAEFK 258 >gi|282881780|ref|ZP_06290438.1| membrane protein OxaA [Peptoniphilus lacrimalis 315-B] gi|281298390|gb|EFA90828.1| membrane protein OxaA [Peptoniphilus lacrimalis 315-B] Length = 244 Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats. Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 20/243 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ++ + ++ + + ++I++TT+ +K+L PL Q + M +QP+I Sbjct: 12 FIRYVYNLIAQIIPNEPTNISYYALSIIITTLILKILVLPLTISQMKNQKKMAELQPEIA 71 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS------- 450 ++++K+K P Q L QLYK+ N N L+GC P+++Q+ V Y+ Sbjct: 72 KIQKKYKNDP-QTLAMKQRQLYKSANYNVLSGCLPMIVQLLVLVGFYRCFYKPQTYIFSQ 130 Query: 451 --LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + +I +L AD T I + + ++ Sbjct: 131 AGFYQAMNKNFFYISNLGVADKTMILPALAAITTFFTSYLATKSPAAGAG---------- 180 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 A ++ MP++ F + A L+IYW+ SN+ +IVQQ V+ + + Sbjct: 181 QDQAKSMMNSMMVAMPIMIFFMGRTLQAELVIYWTVSNIFAIVQQLVVNNFVKKSVEESN 240 Query: 569 RLR 571 LR Sbjct: 241 ELR 243 >gi|324991296|gb|EGC23229.1| SpoIIIJ family protein [Streptococcus sanguinis SK353] gi|325687127|gb|EGD29150.1| SpoIIIJ family protein [Streptococcus sanguinis SK72] gi|332367395|gb|EGJ45128.1| SpoIIIJ family protein [Streptococcus sanguinis SK1059] Length = 307 Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 98/252 (38%), Gaps = 30/252 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I +PM + +F G +G+AI++ T+ V+++ PL Q + M Sbjct: 36 IWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYF 95 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P ++E+ K + Q Q+ ++ K + ++ G C P+L+Q+P F A++ Sbjct: 96 KPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFA 155 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + WIKDLA +D T + +Y+ + + Sbjct: 156 AQYTQGVAGSS-FLWIKDLAKSDLA--LTAIVGILYYIQSVLSLHG-------------- 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + P++ V PA + +YW I I+ + + L Sbjct: 199 IEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINYIIRPRL 256 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 257 RKQVAEEFEKNP 268 >gi|327490082|gb|EGF21870.1| SpoIIIJ family protein [Streptococcus sanguinis SK1058] Length = 307 Score = 133 bits (336), Expect = 5e-29, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 98/252 (38%), Gaps = 30/252 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I +PM + +F G +G+AI++ T+ V+++ PL Q + M Sbjct: 36 IWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYF 95 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P ++E+ K + Q Q+ ++ K + ++ G C P+L+Q+P F A++ Sbjct: 96 KPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFA 155 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + WIKDLA +D T + +Y+ + + Sbjct: 156 AQYTQGVAGSS-FLWIKDLAKSDLA--LTAIVGILYYIQSVLSLHG-------------- 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + P++ V PA + +YW I I+ + + L Sbjct: 199 IEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINYIIRPRL 256 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 257 RKQVAEEFEKNP 268 >gi|125718591|ref|YP_001035724.1| OxaA-like protein precursor [Streptococcus sanguinis SK36] gi|125498508|gb|ABN45174.1| Preprotein translocase subunit YidC, putative [Streptococcus sanguinis SK36] Length = 307 Score = 133 bits (336), Expect = 5e-29, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 98/252 (38%), Gaps = 30/252 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I +PM + +F G +G+AI++ T+ V+++ PL Q + M Sbjct: 36 IWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYF 95 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P ++E+ K + Q Q+ ++ K + ++ G C P+L+Q+P F A++ Sbjct: 96 KPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFA 155 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + WIKDLA +D T + +Y+ + + Sbjct: 156 AQYTQGVAGSS-FLWIKDLAKSDLA--LTAIVGILYYIQSVLSLHG-------------- 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + P++ V PA + +YW I I+ + + L Sbjct: 199 IEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINYIIRPRL 256 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 257 RKQVAEEFEKNP 268 >gi|300814725|ref|ZP_07094973.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511112|gb|EFK38364.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 244 Score = 133 bits (336), Expect = 5e-29, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 104/243 (42%), Gaps = 20/243 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ++ + ++ + + ++I++TT+ +K+L PL Q + M +QP+I Sbjct: 12 FIRYVYNLIAQIIPNEPTNISYYALSIIITTLILKILVLPLTISQMKNQKKMAELQPEIA 71 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS------- 450 ++++K+K P Q L QLYK+ N N L+GC P+++Q+ V F Y+ Sbjct: 72 KIQKKYKNDP-QTLAMKQRQLYKSANYNVLSGCLPMIVQLLVLFGFYRCFYKPQTYIFSQ 130 Query: 451 --LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + +I +L AD T I + + ++ Sbjct: 131 AGFYQAMNKNFFYISNLGVADKTMILPALAAITTFFTSYLATKSPAAGAG---------- 180 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 A ++ MP++ F + A LIIYW+ SN+ +IVQQ V+ + + Sbjct: 181 QDQAKSMMNSMMVAMPIMIFFMGRTLQAELIIYWTVSNIFAIVQQLVVNNFVKKSVEESN 240 Query: 569 RLR 571 LR Sbjct: 241 ELR 243 >gi|329314775|gb|AEB89188.1| Membrane protein oxaA [Staphylococcus aureus subsp. aureus T0131] Length = 284 Score = 133 bits (336), Expect = 5e-29, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 118/259 (45%), Gaps = 36/259 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANM 389 G+FY PM ++ + N L N+G+AI++ + ++++ P Y ++ M Sbjct: 30 GFFYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKM 89 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFA 442 K +P++++++EK K++ Q + ++Q+YK +++NP + GC P+L+Q+P+ Sbjct: 90 KVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W DL D I + G+L F + Sbjct: 150 LYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMK 558 ++ K P + M++ P++ ++ S + L +YWS S +VQ I Sbjct: 192 AYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYY 251 Query: 559 MHGAEIGLIDRLRSTFSKN 577 A+ + + + ++ Sbjct: 252 EKVAKKEVQPFIEAYEREH 270 >gi|227487666|ref|ZP_03917982.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51867] gi|227541375|ref|ZP_03971424.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51866] gi|227092360|gb|EEI27672.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51867] gi|227182926|gb|EEI63898.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51866] Length = 321 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 104/284 (36%), Gaps = 62/284 (21%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ G + ++I++ T V+ L S M Sbjct: 2 LNFIYWPISAVLWFWHKAFGLIMNPDWGVTWALSIVMLTFTVRALLLKPTMNSMRSMRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ ++EK+K +P +++ + ++ K +P+ GC P+L+Q+PVF ++ V+ Sbjct: 62 QILQPKMQAIQEKYKNNPEKMM-EETRRVQKEVGASPVKGCLPMLVQMPVFIGLFHVLRS 120 Query: 450 SL------------------------------EMRHAPFWGWIKDLAAADPTNIFTLFGI 479 A +G + P +++ FG Sbjct: 121 FNRTGTGRGQLGLSIEENYNTPNYIFGVDDVRSFLEARLFGVPLSAYISMPEDMYHAFGE 180 Query: 480 LPFYLPGFMHVGIWPIIMSL---------------SMFIQMKMSPPPADKGQ-------A 517 F + V I++ K P D+ Q Sbjct: 181 GDFTRTNVIMVAAPFILLIAVATHLNGRFSVKRQKQRLASGKQKAPENDQAQMSMNMMNN 240 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 M+L +MP+ +F + GL+ Y + +N+ + QQ + Sbjct: 241 MMLYFMPLTILFTGFVWHIGLLCYMAGNNIWTFCQQRYVFSKMD 284 >gi|108802369|ref|YP_642566.1| putative inner membrane protein translocase component YidC [Mycobacterium sp. MCS] gi|119866062|ref|YP_936014.1| putative inner membrane protein translocase component YidC [Mycobacterium sp. KMS] gi|108772788|gb|ABG11510.1| 60 kDa inner membrane insertion protein [Mycobacterium sp. MCS] gi|119692151|gb|ABL89224.1| 60 kDa inner membrane insertion protein [Mycobacterium sp. KMS] Length = 367 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 95/271 (35%), Gaps = 48/271 (17%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQY 383 + +W I P+ +M +Y + +++M ++ + + +Q Sbjct: 1 MFNWFSLDIIYYPVSAIMWVWYKAFAFLLGPDNFFAWALSVMFLVFTLRAILYKPFVRQI 60 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +T M+ +QP+I L++K+ + Q + M +L K H NP+ GC P+L QIPVF + Sbjct: 61 RTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQKEHGFNPILGCLPMLAQIPVFLGL 119 Query: 444 YKVISISLEMRHA---------------PFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 Y V+ + + D+ N+F + Sbjct: 120 YHVLMSFNRTQTGIGRLGLSVEENRSLPNYLFSATDVGHFLDANLFGAPLGATMIQQHGL 179 Query: 489 HV-------------GIWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMPV 525 ++ ++ + +P A Q ++ P+ Sbjct: 180 EAFTEFNRVAVVVVGVPIMLLAGIATHFNSRASVARQTPEAAANPQTALMNKLALYVFPL 239 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V P +I+YW +N+ + QQ + Sbjct: 240 GVVVGGPFLPLAVIMYWLANNIWTYGQQHYV 270 >gi|255579269|ref|XP_002530480.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis] gi|223529977|gb|EEF31903.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis] Length = 423 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 23/230 (10%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + ++ +NL G N+ +I+LTT+ ++ L PL Q +T+ + ++P+++E++++ + Sbjct: 144 LHHIIDAVHNLTGFNWWASIVLTTLVIRTLMVPLMINQLKATSKLTLMRPRLEEIKQQMQ 203 Query: 405 Q---SPPQVL--QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 P + K M L+K + ++P + +Q PVF + I E + Sbjct: 204 DTGMDPATIAEGNKQMKMLFKEYGVSPFTPMKGLFIQGPVFVCFFLAIRNMAENVPSFKN 263 Query: 460 G---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 G W DL+ D IF + L F++ ++ + +Q + P Sbjct: 264 GGAFWFVDLSTPDSLYIFPVLTALTFWI-------------TIELNMQEGLEGNPVAGTM 310 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 I + V FP + YW +N+ S V+ K+HG + L Sbjct: 311 KNISRVFAALTVPLTMGFPKAIFCYWVTTNLFSFAYGGVL-KLHGVKKFL 359 >gi|329667744|gb|AEB93692.1| putative membrane protein [Lactobacillus johnsonii DPC 6026] Length = 327 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 109/245 (44%), Gaps = 34/245 (13%) Query: 336 WGW-FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVST----A 387 + W F KP+ +M + +G G AI++ T V+L+ PL Sbjct: 40 YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 388 NMKNIQPKIDELREKFKQ---SPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPVF 440 + +QP++ ++E K+ + PQ +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S E+ + F+G ++ + I T+ L + + G Sbjct: 160 MGIYQAVAYSKELAASSFFG----ISLGQRSIILTIIATLLYVVQG-------------- 201 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ M P K M L P + F S P L +Y+ +I+I+QQ + + Sbjct: 202 -YLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLITTFVI 260 Query: 561 GAEIG 565 ++ Sbjct: 261 MPKVK 265 >gi|158294169|ref|XP_315429.4| AGAP005421-PA [Anopheles gambiae str. PEST] gi|157015441|gb|EAA11925.4| AGAP005421-PA [Anopheles gambiae str. PEST] Length = 419 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 95/267 (35%), Gaps = 28/267 (10%) Query: 316 PTIHHYEKDLAIPRFEMLIDWGW-FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374 P I A P F L GW I + + +L + I + TV V+ L Sbjct: 94 PEIADIVAG-AEPAFSTLGLGGWTPVGIVQNCMEFLHIGLDLP--WWGCIAIGTVCVRTL 150 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPL 427 FPL + A M N P++ L+ K ++ + M+ K N+NPL Sbjct: 151 LFPLVIASQRNAAKMNNYMPQLQVLQMKMTEARQAGNAIDSARYGQEMVLFMKEKNLNPL 210 Query: 428 AGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 L Q P+F + ++ + +E W DL D + L + Sbjct: 211 KNMLVPLAQAPIFISFFMGLREMANTPVESMRDGGLFWFTDLTICDQFYALPIITSLTLF 270 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 + +G MS + + IL +P+ +FP ++ YW+ Sbjct: 271 --ATIELGTDSARMSAAN-----------MQTAKYILRALPLFIFPFTINFPGAILCYWA 317 Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRL 570 SN S+VQ + + IDR+ Sbjct: 318 CSNFFSLVQVGFLRIPKVRDFFKIDRI 344 >gi|315640647|ref|ZP_07895752.1| membrane protein [Enterococcus italicus DSM 15952] gi|315483586|gb|EFU74077.1| membrane protein [Enterococcus italicus DSM 15952] Length = 313 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 32/255 (12%) Query: 335 DWGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANM 389 D + + P+ ++Y N FG AI++ T+ V+++ P+ Q V + M Sbjct: 39 DGFIYKTLVVPLGDFLTYLATNFNWGFGWAIIIVTIVVRIILLPMGISQSKKAMVQSEKM 98 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAI 443 + ++P++D + KQ+ + Q M ++YK +N+N L G C P+L+Q+P+F A+ Sbjct: 99 QYLKPQMDIAQANLKQATTREEQLKAQTEMQKIYKENNVNMLGGIGCLPLLIQMPIFSAL 158 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y +S + + A F G + IF L + ++ + P Sbjct: 159 YFTVSYTQGINTATFMG----VNLGKANLIFVALAGLSYVGQSYLSLIGIP--------- 205 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K ++ P++ VF PAG+ +YW + S Q + + + Sbjct: 206 ------EEQKKTMRSMMIVSPLMIVFMSLKAPAGVTLYWVIGGIFSCFQTFITNVLM--K 257 Query: 564 IGLIDRLRSTFSKNY 578 + ++ N Sbjct: 258 PRIKKQIEEEMRLNP 272 >gi|332358341|gb|EGJ36167.1| SpoIIIJ family protein [Streptococcus sanguinis SK355] Length = 307 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 99/252 (39%), Gaps = 30/252 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I +PM + +F G +G+AI++ T+ V+++ PL Q + M Sbjct: 36 IWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYF 95 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P ++E+ K + Q Q+ ++ K + ++ G C P+L+Q+P F A++ Sbjct: 96 KPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFA 155 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + WIKDLA +D T+ + +Y+ + + Sbjct: 156 AQYTQGVAGSS-FLWIKDLAKSDWA--LTVIVGILYYIQSVLSLHG-------------- 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + P++ V PA + +YW I I+ + + L Sbjct: 199 IEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINYIIRPRL 256 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 257 RKQVAEEFEKNP 268 >gi|168060995|ref|XP_001782477.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666030|gb|EDQ52696.1| predicted protein [Physcomitrella patens subsp. patens] Length = 419 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 22/221 (9%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + + G + ++I TTV ++++ P+ Q +TA + ++P+++ + K Sbjct: 170 LQHLIDFVHTQGGLPWWLSIAATTVGIRVMVLPVLVWQMKATARLTLMRPELERITNTIK 229 Query: 405 Q---SPP--QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 + P +V QK M +L+ HN NP +Q P+F + + I E + Sbjct: 230 ESGYDPKVTEVNQKRMKELFAQHNTNPFMPLMGAFVQAPLFISFFFAIRNMAERVPSFKE 289 Query: 460 G---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 G W DL ADP I + L + ++ + M P Sbjct: 290 GGALWFTDLTTADPYFILPIMSGL-------------FTLATIELGAMDGMQGQPMIGKM 336 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M V+ V +SFP L YW +NV S++Q V+ Sbjct: 337 KMFFRGFAVLIVPLTASFPKALFCYWLTTNVCSLIQTTVLR 377 >gi|77405816|ref|ZP_00782900.1| SpoIIIJ family protein [Streptococcus agalactiae H36B] gi|77412537|ref|ZP_00788832.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111] gi|77161405|gb|EAO72421.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111] gi|77175603|gb|EAO78388.1| SpoIIIJ family protein [Streptococcus agalactiae H36B] Length = 266 Score = 133 bits (335), Expect = 7e-29, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 32/244 (13%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNIQPKIDELR 400 M L++YF G FG+AI++ T+ V+++ PL Q M +P + + Sbjct: 1 MANLITYFAQHQGLGFGVAIIIVTIIVRVVILPLGLYQSWKASYQAEKMAYFKPLFEPIN 60 Query: 401 EKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISISLEMR 454 E+ + + Q Q ++ + + ++ G C P+L+Q+P F AI+ + + Sbjct: 61 ERLRNAKTQEEKLAAQTELMTAQRENGLSMFGGIGCLPLLIQMPFFSAIFFAARYTPGVS 120 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 A F G + T I I+ + ++ M+ P + Sbjct: 121 SATFLGLNLGQKSLTLTVIIA-------------------ILYFVQSWLSMQGVPDEQRQ 161 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MP++ VF S PA + +YW + SI+QQ V + + L ++ + Sbjct: 162 QMKTMMYLMPIMMVFMSISLPASVALYWFIGGIFSIIQQLVTT--YVLKPKLRRKVEEEY 219 Query: 575 SKNY 578 +KN Sbjct: 220 TKNP 223 >gi|76799037|ref|ZP_00781232.1| Membrane protein oxaA 2 precursor [Streptococcus agalactiae 18RS21] gi|76585623|gb|EAO62186.1| Membrane protein oxaA 2 precursor [Streptococcus agalactiae 18RS21] Length = 266 Score = 133 bits (335), Expect = 7e-29, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 32/244 (13%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNIQPKIDELR 400 M L++YF G FG+AI++ TV V+++ PL Q M +P + + Sbjct: 1 MANLITYFAQHQGLGFGVAIIIVTVIVRVVILPLGLYQSWKASYQAEKMAYFKPLFEPIN 60 Query: 401 EKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISISLEMR 454 E+ + + Q Q ++ + + ++ G C P+L+Q+P F AI+ + + Sbjct: 61 ERLRNAKTQEEKLAAQTELMTAQRENGLSMFGGIGCLPLLIQMPFFSAIFFAARYTPGVS 120 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 A F G + T I I+ + ++ M+ P + Sbjct: 121 SATFLGLNLGQKSLTLTVIIA-------------------ILYFVQSWLSMQGVPDEQRQ 161 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MP++ VF S PA + +YW + SI+QQ V + + L ++ + Sbjct: 162 QMKTMMYLMPIMMVFMSISLPASVALYWFIGGIFSIIQQLVTT--YVLKPKLRRKVEEEY 219 Query: 575 SKNY 578 +KN Sbjct: 220 TKNP 223 >gi|118472161|ref|YP_891135.1| inner membrane protein translocase component YidC [Mycobacterium smegmatis str. MC2 155] gi|118173448|gb|ABK74344.1| membrane protein OxaA [Mycobacterium smegmatis str. MC2 155] Length = 367 Score = 133 bits (335), Expect = 8e-29, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 97/271 (35%), Gaps = 48/271 (17%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQY 383 + ++ I P+ +M +Y + +++M ++ + + KQ Sbjct: 1 MFNFFSLDIIYYPVSAIMWVWYKAFSFLLGPTNFFAWALSVMFLVFTLRAILYKPFVKQI 60 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +T M+ +QP+I L++K+ + Q + M +L K H NP+ GC P+L Q+PVF + Sbjct: 61 RTTRQMQELQPQIKALQKKYGKD-RQRMALEMQKLQKEHGFNPILGCLPMLAQVPVFLGL 119 Query: 444 YKVISIS-----------------------------------LEMRHAPFWGWIKDLAAA 468 Y V+ + AP + Sbjct: 120 YHVLMSFNRTQTGIGRLGLSVEENRSLGNYVFSATDVQHFLDANLFGAPLGATMIQQHGL 179 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPV 525 + F ++ +P + GI S + + + + P + L P+ Sbjct: 180 EAFTEFNRLAVIIVGVPIMILAGIATHFNSRASVARQSVEAAANPQTAMMNKLALYVFPL 239 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V P +I+YW +N+ + QQ + Sbjct: 240 GVVVGGPFLPLAVIMYWLANNIWTYGQQHYV 270 >gi|195127181|ref|XP_002008047.1| GI12049 [Drosophila mojavensis] gi|193919656|gb|EDW18523.1| GI12049 [Drosophila mojavensis] Length = 423 Score = 133 bits (335), Expect = 8e-29, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 90/231 (38%), Gaps = 37/231 (16%) Query: 345 PMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + M + + + AI + T+ V+ L FPL ++A M N P++ L+ K Sbjct: 105 MIQNCMEFLHCTWDIPWWGAIAIGTLCVRTLIFPLVILAQRNSAKMSNNMPQMQVLQLKM 164 Query: 404 KQSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIYKVISISLE 452 ++ + M+ + +NPL L Q P F + ++ + +E Sbjct: 165 TEARQSGNAIESARYAQEMMLFMREKGVNPLKNMIVPLAQAPLFISFFMGLRQMANTPVE 224 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 W DL ADP + P+I S ++++ +++ A Sbjct: 225 SMRDGGLFWFTDLTLADPYYLL-------------------PVITSATLYLTIELGTDSA 265 Query: 513 ------DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +L +P+V +FPA ++ YW+ SN IS+ Q A++ Sbjct: 266 RLSAANMNTMKYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQVALLR 316 >gi|262066864|ref|ZP_06026476.1| stage III sporulation protein J [Fusobacterium periodonticum ATCC 33693] gi|291379415|gb|EFE86933.1| stage III sporulation protein J [Fusobacterium periodonticum ATCC 33693] Length = 206 Score = 133 bits (335), Expect = 8e-29, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 23/206 (11%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 VGNFG++I++ T+ +K+ PL KQ S MK +QP+ID+++EK+ Q+L Sbjct: 21 KYVGNFGVSIIIVTILIKIALLPLTLKQDKSMKEMKKLQPEIDKIKEKYANDK-QMLNIK 79 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 ++LYK H +NPL GC P+LLQ+P+ FA++ V+ + + F L+ DP I Sbjct: 80 TMELYKEHKVNPLGGCLPLLLQLPILFALFGVLRSGIIPADSSFLWL--KLSEPDPFYIL 137 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 P++ F+Q K+ ++ ++ P++ + Sbjct: 138 -------------------PVLNGAVSFLQQKLMGSADSNPQMKNMMYIFPIMMIMISYK 178 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKM 559 P+GL +YW S+++++VQQ IMK Sbjct: 179 MPSGLQVYWLTSSILAVVQQYFIMKK 204 >gi|227431097|ref|ZP_03913155.1| Oxa1 family cytochrome oxidase biogenesis protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227353137|gb|EEJ43305.1| Oxa1 family cytochrome oxidase biogenesis protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 307 Score = 133 bits (335), Expect = 8e-29, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 104/248 (41%), Gaps = 35/248 (14%) Query: 341 FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVS----TANMKNIQ 393 +I +P+ LM+ + +G G AI++ T +L+ P Q V+ M+ ++ Sbjct: 33 WIGQPLAELMTNIAHFIGGVNGIGWAIIVITAIFRLILLPFFLNQQVNTTVNQIKMQKLK 92 Query: 394 PKIDELR----EKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+ID+L+ + Q AM+ LY+ ++++ + G + +Q+P+F +Y I Sbjct: 93 PEIDKLQTLSRKAATTEEQQKASMAMMSLYRENDVSVIGGISFLTMAMQLPIFSGLYSAI 152 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ A F G+ DL P +F + + + + + + M+ Sbjct: 153 LHAPALQGASFLGF--DLGK--PQLVFAIVAGIIYLIQAW---------------LMMQH 193 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P K A ++ PV+ + +Y+ + +++Q + H GL Sbjct: 194 MPEEQRKTSAAMMLVSPVMIFVFAMIASGAIGLYFVIGGIFALIQTLI---QHYQRPGLE 250 Query: 568 DRLRSTFS 575 R+ + F Sbjct: 251 KRVTAEFK 258 >gi|295428677|ref|ZP_06821303.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus EMRSA16] gi|295127347|gb|EFG56987.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus EMRSA16] Length = 290 Score = 133 bits (334), Expect = 9e-29, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 118/259 (45%), Gaps = 36/259 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANM 389 G+FY PM ++ + N L N+G+AI++ + ++++ P Y ++ M Sbjct: 30 GFFYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKM 89 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFA 442 K +P++++++EK K++ Q + ++Q+YK +++NP + GC P+L+Q+P+ Sbjct: 90 KVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W DL D I + G+L F + Sbjct: 150 LYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMK 558 ++ K P + M++ P++ ++ S + L +YWS S +VQ I Sbjct: 192 AYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYY 251 Query: 559 MHGAEIGLIDRLRSTFSKN 577 A+ L + + ++ Sbjct: 252 EKVAKKELQPFIEAYEREH 270 >gi|294781807|ref|ZP_06747140.1| stage III sporulation protein J [Fusobacterium sp. 1_1_41FAA] gi|294481917|gb|EFG29685.1| stage III sporulation protein J [Fusobacterium sp. 1_1_41FAA] Length = 206 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 23/206 (11%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 VGNFG++I++ T+ +K+ PL KQ ST MK +QP+I++L+EK+ Q+L Sbjct: 21 KYVGNFGVSIIIVTILIKIALLPLTLKQDKSTKEMKKLQPEIEKLKEKYANDK-QMLNIK 79 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 ++LYK H +NPL GC P+LLQ+P+ FA++ V+ + + F L DP I Sbjct: 80 TMELYKEHKVNPLGGCLPLLLQLPILFALFGVLRSGIIPADSSFLWL--KLPEPDPFFIL 137 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 P++ F Q K+ ++ ++ P++ +F Sbjct: 138 -------------------PVLNGAVSFFQQKLMGSADSNPQMKNMMYIFPIMMIFISYR 178 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKM 559 P+GL +YW S+V+++VQQ IMK Sbjct: 179 MPSGLQLYWLTSSVLAVVQQYFIMKK 204 >gi|255029969|ref|ZP_05301920.1| OxaA-like protein precursor [Listeria monocytogenes LO28] Length = 249 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 32/234 (13%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMK 390 G+F ++ +P + + VG N+GIAI++TT+ ++ L PL K Q + M Sbjct: 32 GFFSTYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMA 91 Query: 391 NIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 +P+IDE++ + K + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y Sbjct: 92 VAKPEIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYY 151 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ A +L + D M + I ++ L+ + Sbjct: 152 AIRGSSEI--ASHTFLWFNLGSPD------------------MVLAIIAGLVYLAQYFVS 191 Query: 506 KMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + P K Q I+ M P++ +F + P+ L +YW+ + Q + K Sbjct: 192 MIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKK 245 >gi|213400717|gb|ACJ47007.1| hypothetical protein [Wolbachia endosymbiont of Tribolium confusum] Length = 171 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 65/172 (37%), Positives = 97/172 (56%), Gaps = 3/172 (1%) Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275 EG + +K L E Y DI K + S +W G +DKYW + IP K + Sbjct: 1 HEGVLGAFNNK-LEEWTYKDISKKRLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSI 59 Query: 276 KYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 K+ + + ++QA F ILPG S +T N+ FAGAK+ + Y+ L IP F+ + Sbjct: 60 KHTNVNNIDKFQADFVRPYTHILPGTSASTLNYFFAGAKKLNLLDSYKDTLNIPLFDKAV 119 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 D+G YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + Y+S Sbjct: 120 DFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYISM 171 >gi|325695044|gb|EGD36947.1| SpoIIIJ family protein [Streptococcus sanguinis SK150] Length = 307 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 98/252 (38%), Gaps = 30/252 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I +PM + +F G +G+AI++ T+ V+++ PL Q + M Sbjct: 36 IWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYF 95 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P ++E+ K + Q Q+ ++ K + ++ G C P+L+Q+P F A++ Sbjct: 96 KPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFA 155 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + WIKDLA +D T + +Y+ + + Sbjct: 156 AQYTQGVAGSS-FLWIKDLAKSDWA--LTAIVGILYYIQSVLSLHG-------------- 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + P++ V PA + +YW I I+ + + L Sbjct: 199 IEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINYIIRPRL 256 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 257 RKQVAEEFEKNP 268 >gi|163915277|ref|NP_001106402.1| oxidase (cytochrome c) assembly 1-like [Xenopus (Silurana) tropicalis] gi|156230714|gb|AAI52066.1| LOC100127562 protein [Xenopus (Silurana) tropicalis] Length = 425 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 99/244 (40%), Gaps = 37/244 (15%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + + + VG + AI+ TV ++L FPL K A + N P+I + + Sbjct: 121 IQNFLEFLNVDVGLPWWGAIVTGTVLARILVFPLIVKGQREAAKLNNHMPQISSMTNRMN 180 Query: 405 QSPPQVLQKAMIQLY-------KTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ + + Y K H++NPL G L+Q P+F A+ ++ + + Sbjct: 181 EAKQSGNKFEFSKAYSDLTLYQKKHDVNPLRGFLVPLVQAPIFISFFVALRQMSYLPVPS 240 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---- 509 + W DL AADP I P+ ++ +M+ +++ Sbjct: 241 MQSGGLWWFTDLTAADPFYIL-------------------PLTVTCTMWGVLELGAESGV 281 Query: 510 -PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK-MHGAEIGLI 567 P K + MP++ + +FP + YW SNV S+ Q + + ++ + Sbjct: 282 DNPNLKIMKTVFRVMPLIILPLTINFPTAVFTYWVTSNVFSLAQVSFLRIPAVRKKLKIP 341 Query: 568 DRLR 571 +R++ Sbjct: 342 ERIK 345 >gi|300173702|ref|YP_003772868.1| membrane protein OxaA [Leuconostoc gasicomitatum LMG 18811] gi|299888081|emb|CBL92049.1| Membrane protein oxaA 2 precursor [Leuconostoc gasicomitatum LMG 18811] Length = 305 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 104/254 (40%), Gaps = 35/254 (13%) Query: 341 FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVS----TANMKNIQ 393 +I P+ M+ +++G G AI++ T ++L+ P Q V+ M+ ++ Sbjct: 33 WIGHPLANGMTDIAHIIGGVNGIGWAIIIITAILRLILLPFFLNQQVNTTINQIKMQTLK 92 Query: 394 PKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+ID+L+ +++ Q AM+ LY+ ++++ + G + +Q+P+F +Y I Sbjct: 93 PEIDKLQALTRKAGTTQEQQQASMAMMSLYRENDVSVIGGISFLTMAMQLPIFSGLYSAI 152 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ A F G P +F + + + + ++ M+ Sbjct: 153 LHAPALKGAEFLG----FNLGKPQIVFAIAAGVIYLIQAWLA---------------MQH 193 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P K AM++ P++ + +Y+ + +++Q + H GL Sbjct: 194 MPEEQKKTSAMMMFISPIMIFVFAMIASGAIGLYFVVGGLFALIQTLI---QHYQRPGLE 250 Query: 568 DRLRSTFSKNYNSQ 581 R+ F + Sbjct: 251 KRVVREFKIKKTAD 264 >gi|42519505|ref|NP_965435.1| hypothetical protein LJ1629 [Lactobacillus johnsonii NCC 533] gi|41583793|gb|AAS09401.1| hypothetical protein LJ_1629 [Lactobacillus johnsonii NCC 533] Length = 327 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 109/245 (44%), Gaps = 34/245 (13%) Query: 336 WGW-FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVST----A 387 + W F KP+ +M + +G G AI++ T V+L+ PL Sbjct: 40 YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 388 NMKNIQPKIDELREKFKQ---SPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPVF 440 + +QP++ ++E K+ + PQ +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 100 KTQKLQPQMRLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S E+ + F+G ++ + I T+ L + + G Sbjct: 160 MGIYQAVAYSKELAASSFFG----ISLGQRSIILTIIATLLYVVQG-------------- 201 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ M P K M L P + F S P L +Y+ +I+I+QQ + + Sbjct: 202 -YLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLITTFVI 260 Query: 561 GAEIG 565 ++ Sbjct: 261 MPKVK 265 >gi|157311737|ref|NP_001098600.1| mitochondrial inner membrane protein OXA1L [Danio rerio] gi|156230848|gb|AAI52010.1| Oxa1l protein [Danio rerio] Length = 469 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 112/319 (35%), Gaps = 35/319 (10%) Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT---TTNFLFAGAKEFPTIHHYEKD 324 ET+ S A A S + P S+T T A + + Sbjct: 84 ETTVQSVSTPSEPPDAAISAPASIPAPAVDPTPSVTPPITEQVAEAPLTALDVLQGVGAE 143 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQY 383 ++ + + L+ + + +G + AI+ T+ + FP+ K Sbjct: 144 ASLSELGLC-----NSTPVGLIQNLLEFMHVSIGLPWWGAIVAGTIVARCAVFPVIVKGQ 198 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY-------KTHNINPLAGCWPILLQ 436 A + N+ P++ +L + ++ + + Y K ++NP G L+Q Sbjct: 199 REAAKLNNVMPEMTKLTNRMNEAKQSGNKFEFSKAYTDLMMFQKKKDVNPFRGFLVPLVQ 258 Query: 437 IPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 P+F + + + E+ W DL AADP I + + + + +G Sbjct: 259 APIFLSFFIALRKMSELPVPSLQTGGLWWFTDLTAADPFYILPI--AVTGTMVAILELGA 316 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + P + + MP V + +FP + YW SN+ S+ Q Sbjct: 317 ESGV------------DNPNLRAMKTVFRIMPFVILPLTINFPTAVFTYWMTSNLFSLAQ 364 Query: 553 QAVIMK-MHGAEIGLIDRL 570 AV+ ++ + +R+ Sbjct: 365 VAVLRHPAVRQKLRIPERI 383 >gi|312370989|gb|EFR19273.1| hypothetical protein AND_22764 [Anopheles darlingi] Length = 415 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 92/257 (35%), Gaps = 27/257 (10%) Query: 326 AIPRFEMLIDWGW-FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 A P F L GW I + + +L + I + TV V+ L FPL Sbjct: 96 AEPTFASLGLGGWTPVGIVQNCMEFLHIGLDLP--WWGCIAIGTVVVRTLLFPLVIASQK 153 Query: 385 STANMKNIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQI 437 + A M N P++ L+ K ++ + ++ K +NPL L Q Sbjct: 154 NAAKMNNHMPQMQVLQVKMTEARQAGNAIDAARYGQELMLFMKEKKLNPLKNMLVPLAQA 213 Query: 438 PVFF----AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 P+F + ++ + ++ W DL D + + +L + +G Sbjct: 214 PIFISFFMGLREMANTPVDSMREGGLFWFTDLTVCDQFYALPIITSMTLFLT--IELGTD 271 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MS + IL +P+ +FP ++ YW+ SN S++Q Sbjct: 272 SARMSA-----------AGMQTAKYILRALPIFIFPFTINFPGAILCYWACSNFFSLLQV 320 Query: 554 AVIMKMHGAEIGLIDRL 570 + + IDR+ Sbjct: 321 GFLRIPKVRDFFKIDRI 337 >gi|213400715|gb|ACJ47006.1| hypothetical protein [Wolbachia endosymbiont of Drosophila simulans] Length = 171 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 65/172 (37%), Positives = 97/172 (56%), Gaps = 3/172 (1%) Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275 EG + +K L E Y DI K + S +W G +DKYW + IP K + Sbjct: 1 HEGVLGAFNNK-LEEWTYKDISKKRLIKASTSEKNWFGFADKYWLTAIIPKKSDKINVSI 59 Query: 276 KYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 K+ + + ++QA F ILPG S +T N+ FAGAK+ + Y+ L IP F+ + Sbjct: 60 KHTNVNNIDKFQADFVRPYTHILPGTSASTLNYFFAGAKKLNLLDSYKDTLNIPLFDKAV 119 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 D+G YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + Y+S Sbjct: 120 DFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYISM 171 >gi|195376879|ref|XP_002047220.1| GJ13319 [Drosophila virilis] gi|194154378|gb|EDW69562.1| GJ13319 [Drosophila virilis] Length = 447 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 63/313 (20%), Positives = 110/313 (35%), Gaps = 38/313 (12%) Query: 263 FIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 IP ++ +Y S SA E+ LP P Sbjct: 61 LIPLYSSAAAGGLRYASSKTDVPPNMESAKELVDLPAIPDAPIPPAIQNISTDPESLMET 120 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKK 381 D+A I G + + + M + + + I + T+ V+ L FPL Sbjct: 121 IDMAGEPTFASIGLGGWSPVG-MVQNCMEFLHCTWDIPWWGTIAIGTIVVRTLIFPLVIL 179 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPP-------QVLQKAMIQLYKTHNINPLAGCWPIL 434 ++A M N P++ L+ K ++ + M+ K +NPL L Sbjct: 180 AQRNSAKMSNNMPQMQVLQLKMTEARQSGNAIESARYAQEMMLFMKEKGVNPLKNMIVPL 239 Query: 435 LQIP----VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 Q P F + ++ + +E W DL ADP + Sbjct: 240 AQAPLFLSFFMGLRQMANTPVESMRDGGLFWFTDLTLADPFYLL---------------- 283 Query: 491 GIWPIIMSLSMFIQMKMSPPPA------DKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 P+I S ++++ +++ A +L +P+V +FPA ++ YW+ Sbjct: 284 ---PVITSATLYLTIELGTDSARLSAANMNTMKYVLRALPIVIFPFTMNFPAAILTYWAC 340 Query: 545 SNVISIVQQAVIM 557 SN IS+ Q AV+ Sbjct: 341 SNFISLGQVAVLR 353 >gi|229822836|ref|ZP_04448906.1| hypothetical protein GCWU000282_00125 [Catonella morbi ATCC 51271] gi|229787649|gb|EEP23763.1| hypothetical protein GCWU000282_00125 [Catonella morbi ATCC 51271] Length = 323 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 31/254 (12%) Query: 341 FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFP----LAKKQYVSTANMKNIQPK 395 ++ KP + + + N +G+AI++ T+ ++ P + + +S A MK QP+ Sbjct: 44 YLGKPAAAFLDFLAGFLFNSYGLAIIIVTLLTRVFMLPSSLKMTRDTMISQARMKVAQPE 103 Query: 396 IDELREKFKQ----SPPQVLQKAMIQLYKTHNINPL---AGCWPILLQIPVFFAIYKVIS 448 I+E++E+ + LQ+ ++ +YK +NIN L +GC P+LLQ+PV A+Y I Sbjct: 104 INEIQEEINASKDPAERARLQQELMGVYKKYNINMLGGLSGCLPLLLQMPVISAVYAAIR 163 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S ++++ F G L + + + I+ S M QM + Sbjct: 164 TSSAIQNSTFLGI--QLGQRSTLIVILVVAVS--------------ILQSWLMQKQMPST 207 Query: 509 PPPADKGQA-MILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI-G 565 P GQ ++ WM P++F + + AGL +Y+ V I QQ + +I Sbjct: 208 PGNEKAGQTSQVMFWMNPILFGWMTWTTDAGLGLYFLAGAVFMIGQQLYTNHVVKPKIQE 267 Query: 566 LIDRLRSTFSKNYN 579 +ID+ + Sbjct: 268 IIDQDMANVQATPR 281 >gi|15925080|ref|NP_372614.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu50] gi|15927665|ref|NP_375198.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus N315] gi|21283742|ref|NP_646830.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MW2] gi|49486883|ref|YP_044104.1| hypothetical protein SAS1994 [Staphylococcus aureus subsp. aureus MSSA476] gi|57650764|ref|YP_186898.1| hypothetical protein SACOL2082 [Staphylococcus aureus subsp. aureus COL] gi|82751692|ref|YP_417433.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus RF122] gi|87161292|ref|YP_494692.1| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195993|ref|YP_500806.1| hypothetical protein SAOUHSC_02327 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268542|ref|YP_001247485.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus subsp. aureus JH9] gi|150394606|ref|YP_001317281.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus subsp. aureus JH1] gi|151222206|ref|YP_001333028.1| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus str. Newman] gi|156980406|ref|YP_001442665.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu3] gi|253317154|ref|ZP_04840367.1| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731073|ref|ZP_04865238.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733076|ref|ZP_04867241.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus aureus subsp. aureus TCH130] gi|255006879|ref|ZP_05145480.2| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257426229|ref|ZP_05602644.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus 55/2053] gi|257428887|ref|ZP_05605281.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus 65-1322] gi|257431497|ref|ZP_05607870.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus 68-397] gi|257434206|ref|ZP_05610556.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus E1410] gi|257437118|ref|ZP_05613158.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus M876] gi|257793849|ref|ZP_05642828.1| membrane protein oxaA [Staphylococcus aureus A9781] gi|258407017|ref|ZP_05680167.1| membrane protein OxaA [Staphylococcus aureus A9763] gi|258422038|ref|ZP_05684955.1| membrane-embedded lipoprotein [Staphylococcus aureus A9719] gi|258422909|ref|ZP_05685809.1| membrane-embedded lipoprotein [Staphylococcus aureus A9635] gi|258433592|ref|ZP_05688665.1| membrane protein oxaA [Staphylococcus aureus A9299] gi|258440487|ref|ZP_05690657.1| membrane-embedded lipoprotein [Staphylococcus aureus A8115] gi|258445695|ref|ZP_05693873.1| membrane protein oxaA [Staphylococcus aureus A6300] gi|258450149|ref|ZP_05698244.1| membrane-embedded lipoprotein [Staphylococcus aureus A6224] gi|258453199|ref|ZP_05701190.1| membrane protein oxaA [Staphylococcus aureus A5948] gi|258453396|ref|ZP_05701378.1| membrane protein oxaA [Staphylococcus aureus A5937] gi|262049258|ref|ZP_06022133.1| lipoprotein precursor [Staphylococcus aureus D30] gi|269203726|ref|YP_003282995.1| hypothetical protein SAAV_2144 [Staphylococcus aureus subsp. aureus ED98] gi|282894735|ref|ZP_06302961.1| membrane protein oxaA [Staphylococcus aureus A8117] gi|282904758|ref|ZP_06312632.1| putative lipoprotein [Staphylococcus aureus subsp. aureus C160] gi|282906435|ref|ZP_06314286.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus Btn1260] gi|282909403|ref|ZP_06317218.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911655|ref|ZP_06319454.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus WBG10049] gi|282914937|ref|ZP_06322717.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M899] gi|282920268|ref|ZP_06327992.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C427] gi|282923079|ref|ZP_06330764.1| membrane protein oxaA [Staphylococcus aureus A9765] gi|282925479|ref|ZP_06333133.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C101] gi|282929015|ref|ZP_06336600.1| membrane protein oxaA [Staphylococcus aureus A10102] gi|283771258|ref|ZP_06344147.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus H19] gi|283958870|ref|ZP_06376315.1| putative lipoprotein [Staphylococcus aureus subsp. aureus A017934/97] gi|284025125|ref|ZP_06379523.1| hypothetical protein Saura13_11083 [Staphylococcus aureus subsp. aureus 132] gi|293509008|ref|ZP_06667795.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 58-424] gi|293510921|ref|ZP_06669620.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus M809] gi|293547523|ref|ZP_06672198.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M1015] gi|294850062|ref|ZP_06790799.1| membrane protein oxaA [Staphylococcus aureus A9754] gi|295407021|ref|ZP_06816823.1| membrane protein oxaA [Staphylococcus aureus A8819] gi|296276880|ref|ZP_06859387.1| hypothetical protein SauraMR_11054 [Staphylococcus aureus subsp. aureus MR1] gi|297210090|ref|ZP_06926483.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297246020|ref|ZP_06929877.1| membrane protein oxaA [Staphylococcus aureus A8796] gi|297589843|ref|ZP_06948483.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MN8] gi|300910453|ref|ZP_07127905.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus TCH70] gi|304379271|ref|ZP_07362010.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54038805|sp|P65629|OXAA_STAAN RecName: Full=Membrane protein oxaA; Flags: Precursor gi|54038806|sp|P65630|OXAA_STAAW RecName: Full=Membrane protein oxaA; Flags: Precursor gi|54041694|sp|P65628|OXAA_STAAM RecName: Full=Membrane protein oxaA; Flags: Precursor gi|56749186|sp|Q6G7M0|OXAA_STAAS RecName: Full=Membrane protein oxaA; Flags: Precursor gi|81694068|sp|Q5HEA9|OXAA_STAAC RecName: Full=Membrane protein oxaA; Flags: Precursor gi|122538967|sp|Q2FWG4|OXAA_STAA8 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|123484953|sp|Q2FF36|OXAA_STAA3 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|123548228|sp|Q2YUI9|OXAA_STAAB RecName: Full=Membrane protein oxaA; Flags: Precursor gi|189036365|sp|A7X4S6|OXAA_STAA1 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|189036366|sp|A6U3H6|OXAA_STAA2 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|189036367|sp|A5IUN6|OXAA_STAA9 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|189036368|sp|A6QIT4|OXAA_STAAE RecName: Full=Membrane protein oxaA; Flags: Precursor gi|13701885|dbj|BAB43177.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus N315] gi|14247863|dbj|BAB58252.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu50] gi|21205184|dbj|BAB95878.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MW2] gi|49245326|emb|CAG43801.1| putative membrane protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57284950|gb|AAW37044.1| membrane protein, putative [Staphylococcus aureus subsp. aureus COL] gi|82657223|emb|CAI81663.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus RF122] gi|87127266|gb|ABD21780.1| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203551|gb|ABD31361.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741611|gb|ABQ49909.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus subsp. aureus JH9] gi|149947058|gb|ABR52994.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus subsp. aureus JH1] gi|150375006|dbj|BAF68266.1| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus str. Newman] gi|156722541|dbj|BAF78958.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu3] gi|253725200|gb|EES93929.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728984|gb|EES97713.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus aureus subsp. aureus TCH130] gi|257270934|gb|EEV03107.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus 55/2053] gi|257274229|gb|EEV05746.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus 65-1322] gi|257277738|gb|EEV08408.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus 68-397] gi|257280845|gb|EEV10990.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus E1410] gi|257283511|gb|EEV13638.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus M876] gi|257787821|gb|EEV26161.1| membrane protein oxaA [Staphylococcus aureus A9781] gi|257841350|gb|EEV65794.1| membrane protein OxaA [Staphylococcus aureus A9763] gi|257841938|gb|EEV66370.1| membrane-embedded lipoprotein [Staphylococcus aureus A9719] gi|257846933|gb|EEV70947.1| membrane-embedded lipoprotein [Staphylococcus aureus A9635] gi|257849323|gb|EEV73302.1| membrane protein oxaA [Staphylococcus aureus A9299] gi|257852556|gb|EEV76474.1| membrane-embedded lipoprotein [Staphylococcus aureus A8115] gi|257855534|gb|EEV78471.1| membrane protein oxaA [Staphylococcus aureus A6300] gi|257856623|gb|EEV79529.1| membrane-embedded lipoprotein [Staphylococcus aureus A6224] gi|257859145|gb|EEV82002.1| membrane protein oxaA [Staphylococcus aureus A5948] gi|257864377|gb|EEV87123.1| membrane protein oxaA [Staphylococcus aureus A5937] gi|259162623|gb|EEW47190.1| lipoprotein precursor [Staphylococcus aureus D30] gi|262076016|gb|ACY11989.1| hypothetical protein SAAV_2144 [Staphylococcus aureus subsp. aureus ED98] gi|269941690|emb|CBI50097.1| putative membrane protein [Staphylococcus aureus subsp. aureus TW20] gi|282312880|gb|EFB43281.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C101] gi|282316128|gb|EFB46509.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C427] gi|282321140|gb|EFB51471.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M899] gi|282324420|gb|EFB54733.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus WBG10049] gi|282326673|gb|EFB56971.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330385|gb|EFB59903.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus Btn1260] gi|282589321|gb|EFB94413.1| membrane protein oxaA [Staphylococcus aureus A10102] gi|282593270|gb|EFB98267.1| membrane protein oxaA [Staphylococcus aureus A9765] gi|282594791|gb|EFB99768.1| putative lipoprotein [Staphylococcus aureus subsp. aureus C160] gi|282762823|gb|EFC02957.1| membrane protein oxaA [Staphylococcus aureus A8117] gi|283459463|gb|EFC06556.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus H19] gi|283789588|gb|EFC28411.1| putative lipoprotein [Staphylococcus aureus subsp. aureus A017934/97] gi|285817755|gb|ADC38242.1| OxaI/YidC membrane insertion protein [Staphylococcus aureus 04-02981] gi|290919643|gb|EFD96716.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M1015] gi|291094712|gb|EFE24984.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 58-424] gi|291466206|gb|EFF08733.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus M809] gi|294823010|gb|EFG39442.1| membrane protein oxaA [Staphylococcus aureus A9754] gi|294968046|gb|EFG44073.1| membrane protein oxaA [Staphylococcus aureus A8819] gi|296885290|gb|EFH24230.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177019|gb|EFH36274.1| membrane protein oxaA [Staphylococcus aureus A8796] gi|297576971|gb|EFH95685.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MN8] gi|300888295|gb|EFK83486.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus TCH70] gi|302333736|gb|ADL23929.1| OxaI/YidC membrane insertion protein [Staphylococcus aureus subsp. aureus JKD6159] gi|302751971|gb|ADL66148.1| OxaI/YidC membrane insertion protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304342130|gb|EFM08030.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830442|emb|CBX35284.1| 60Kd inner membrane family protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128761|gb|EFT84761.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus CGS03] gi|315193252|gb|EFU23650.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus CGS00] gi|315196976|gb|EFU27318.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus CGS01] gi|320140737|gb|EFW32589.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus subsp. aureus MRSA131] gi|320143713|gb|EFW35490.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus subsp. aureus MRSA177] gi|323439193|gb|EGA96920.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus O11] gi|323442429|gb|EGB00058.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus O46] gi|329724000|gb|EGG60524.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus subsp. aureus 21189] gi|329726332|gb|EGG62800.1| putative stage III sporulation protein J [Staphylococcus aureus subsp. aureus 21172] gi|329729297|gb|EGG65705.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus subsp. aureus 21193] Length = 290 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 118/259 (45%), Gaps = 36/259 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANM 389 G+FY PM ++ + N L N+G+AI++ + ++++ P Y ++ M Sbjct: 30 GFFYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKM 89 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFA 442 K +P++++++EK K++ Q + ++Q+YK +++NP + GC P+L+Q+P+ Sbjct: 90 KVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W DL D I + G+L F + Sbjct: 150 LYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMK 558 ++ K P + M++ P++ ++ S + L +YWS S +VQ I Sbjct: 192 AYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYY 251 Query: 559 MHGAEIGLIDRLRSTFSKN 577 A+ + + + ++ Sbjct: 252 EKVAKKEVQPFIEAYEREH 270 >gi|291230686|ref|XP_002735298.1| PREDICTED: Inner membrane protein OXA1L, mitochondrial-like [Saccoglossus kowalevskii] Length = 424 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 87/236 (36%), Gaps = 27/236 (11%) Query: 334 IDWGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + G F + + + + + NL + AI TV + L FP+ + + + N+ Sbjct: 109 LGLGNFTPVGA-IQNCLEFLHINLHLPWWSAISCCTVIARFLIFPVVIRGQRNAVKLNNV 167 Query: 393 QPKIDELREKFKQSPPQVLQ-------KAMIQLYKTHNINPLAGCWPILLQIPV----FF 441 P + L K + Q + K H +NP+ L+Q P+ F Sbjct: 168 MPTVQRLTNKMNEIRSSGSQLEIARATNELQMFMKKHGVNPMKNMLVPLVQAPIFISFFI 227 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 + K+ ++ +E W DL ADP I L I + Sbjct: 228 GLRKMAALPVESMQTGGLYWFTDLTIADPYYIMPAIATLSML---------CIIELGGET 278 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +Q P + ++ +P V + +S PA + YW SN IS+ Q A++ Sbjct: 279 GVQ-----NPQMQNMKTVMRILPFVILPFTASMPASVFCYWLTSNFISLGQVALLK 329 >gi|325690943|gb|EGD32943.1| SpoIIIJ family protein [Streptococcus sanguinis SK115] Length = 307 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 98/252 (38%), Gaps = 30/252 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I +PM + +F G +G+AI++ T+ V+++ PL Q + M Sbjct: 36 IWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYF 95 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P ++E+ K + Q Q+ ++ K + ++ G C P+L+Q+P F A++ Sbjct: 96 KPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFA 155 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + WIKDLA +D T + +Y+ + + Sbjct: 156 AQYTQGVAGSS-FLWIKDLAKSDLA--LTAIVGILYYIQSVLSLHG-------------- 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + P++ V PA + +YW I I+ + + L Sbjct: 199 IEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINYIIRPRL 256 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 257 RKQVAEEFEKNP 268 >gi|319400148|gb|EFV88383.1| 60Kd inner membrane family protein [Staphylococcus epidermidis FRI909] Length = 278 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 110/261 (42%), Gaps = 36/261 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN--- 391 G FY K M + + + N+G AI+ + V+ + P Q + M+ Sbjct: 29 GIFYNVFVKSMDEFLHFLGKVFQDNYGFAIISIVLIVRFILLPFMLIQVKNMHMMREKTK 88 Query: 392 -IQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAI 443 +QP++D +R+K K + Q + +++ Y+++ INPL GC P+L+Q+P+ + Sbjct: 89 VVQPELDAIRDKIKHATSQEERNAANQLLLKKYQSYGINPLKNMLGCLPVLIQMPILMGL 148 Query: 444 YKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y + S + P + W DL D I T+ + +++ ++ +P + Sbjct: 149 YMSLKYPSSHGITEYPHFLWF-DLTQPDL--IMTIIAAIMYFVQPLVNSIHYPKDQRKTY 205 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + ++ + P+ +A A L +YWS S IVQ H Sbjct: 206 YF---------------MMVFSPIFITYASLHSAAALGLYWSISAAFLIVQMHFAH-SHY 249 Query: 562 AEIGLID--RLRSTFSKNYNS 580 ++ L + +L+ + ++ Sbjct: 250 KKVALHEAKKLKQKLEHHKDN 270 >gi|289450229|ref|YP_003475561.1| YidC/Oxa1 family membrane protein insertase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184776|gb|ADC91201.1| membrane protein insertase, YidC/Oxa1 family [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 321 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 119/312 (38%), Gaps = 85/312 (27%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +M Y++ N+G+ I++ TV ++L+ P + KQ+ +T + + P++D Sbjct: 7 ILSPLYVAFSWIMRNLYDIFNNYGLVIIIFTVAIRLIMIPFSVKQHKTTLKTQALAPQLD 66 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL------ 451 +L+ + + Q LQ+A + LY+ HN++ GC P LL + + + +Y+++S L Sbjct: 67 DLKRVYGKD-RQGLQEATMALYRKHNVSQFGGCLPSLLPLIIIWPVYRMVSSPLQYISGA 125 Query: 452 ------------------------------------------EMRHAPFWGWIKDLAAAD 469 E +A GW+K D Sbjct: 126 VTENITKLAQHLNQSGLITASELKNLAYSDIPVLTVLHTHATEFANAVEQGWLKASQLID 185 Query: 470 PTNIFTLFGILPFYLP---------GFMHVGIWPIIMSLSMFIQMKMS------------ 508 P + G P ++ + I ++ +S F+ KM Sbjct: 186 PYFLGVNLGDTATINPKLLFGDQMSRYLPILIIVLLAVVSTFLMSKMMEWTNPSYKKIKE 245 Query: 509 --------------PPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +G + + MP++ ++ S PA + IYW N+++++QQ Sbjct: 246 SKARAKNNPARSEVTDMTQQGMMKGMKFTMPLITLYMCFSMPAAMSIYWIVGNLMAMLQQ 305 Query: 554 AVIMKMHGAEIG 565 ++ ++ + Sbjct: 306 YILYALYTKKTK 317 >gi|49484314|ref|YP_041538.1| hypothetical protein SAR2179 [Staphylococcus aureus subsp. aureus MRSA252] gi|56749221|sp|Q6GEY5|OXAA_STAAR RecName: Full=Membrane protein oxaA; Flags: Precursor gi|49242443|emb|CAG41159.1| putative membrane protein [Staphylococcus aureus subsp. aureus MRSA252] Length = 290 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 118/259 (45%), Gaps = 36/259 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANM 389 G+FY PM ++ + N L N+G+AI++ + ++++ P Y ++ M Sbjct: 30 GFFYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKM 89 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFA 442 K +P++++++EK K++ Q + ++Q+YK +++NP + GC P+L+Q+P+ Sbjct: 90 KVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W DL D I + G+L F + Sbjct: 150 LYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMK 558 ++ K P + M++ P++ ++ S + L +YWS S +VQ I Sbjct: 192 AYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYY 251 Query: 559 MHGAEIGLIDRLRSTFSKN 577 A+ + + + ++ Sbjct: 252 EKVAKKEVQPFIEAYEREH 270 >gi|324993653|gb|EGC25572.1| SpoIIIJ family protein [Streptococcus sanguinis SK405] gi|324995035|gb|EGC26948.1| SpoIIIJ family protein [Streptococcus sanguinis SK678] gi|327462922|gb|EGF09243.1| SpoIIIJ family protein [Streptococcus sanguinis SK1] gi|327474526|gb|EGF19931.1| SpoIIIJ family protein [Streptococcus sanguinis SK408] Length = 307 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 98/252 (38%), Gaps = 30/252 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I +PM + +F G +G+AI++ T+ V+++ PL Q + M Sbjct: 36 IWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYF 95 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P ++E+ K + Q Q+ ++ K + ++ G C P+L+Q+P F A++ Sbjct: 96 KPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFA 155 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + WIKDLA +D T + +Y+ + + Sbjct: 156 AQYTQGVAGSS-FLWIKDLAKSDLA--LTAIVGILYYIQSVLSLHG-------------- 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + P++ V PA + +YW I I+ + + L Sbjct: 199 IEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINYIIRPRL 256 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 257 RKQVAEEFEKNP 268 >gi|330719323|ref|ZP_08313923.1| preprotein translocase subunit YidC [Leuconostoc fallax KCTC 3537] Length = 313 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 104/254 (40%), Gaps = 35/254 (13%) Query: 341 FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNIQ 393 +I P+ +M+ N VG G AI++ T ++L+ P Q + M+ ++ Sbjct: 33 WIGHPLADIMTSIANFVGGTNGIGWAIIIITAVLRLILLPFFLNQQKASTINQIKMQQLK 92 Query: 394 PKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+ID+L+ +++ Q Q+ AM+ LY+ +N++ G + +Q+PVF +Y I Sbjct: 93 PEIDKLQAITRKAGTQQEQQQASMAMMSLYRENNVSLTGGISFLTMAMQVPVFSGLYSAI 152 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S +R A F+G+ + + +F++ L + ++ P Sbjct: 153 LHSPSLRDATFFGFNLNQSQ----IVFSVIAGLIYLAQAWLMAKHLP------------- 195 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 K + ++ P++ + +Y+ + + Q A+ H + Sbjct: 196 --EEQRKASSAMMYISPIMIFAFSMYASGAIGLYFIVGGIFLLFQSAI---NHLQRPAME 250 Query: 568 DRLRSTFSKNYNSQ 581 +++ F ++ Sbjct: 251 EKVSKEFKVEKTAE 264 >gi|327470412|gb|EGF15868.1| SpoIIIJ family protein [Streptococcus sanguinis SK330] Length = 307 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 98/252 (38%), Gaps = 30/252 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I +PM + +F G +G+AI++ T+ V+++ PL Q + M Sbjct: 36 IWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYF 95 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P ++E+ K + Q Q+ ++ K + ++ G C P+L+Q+P F A++ Sbjct: 96 KPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFA 155 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + WIKDLA +D T + +Y+ + + Sbjct: 156 AQYTQGVAGSS-FLWIKDLAKSDWA--LTAIVGILYYIQSVLSLHG-------------- 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + P++ V PA + +YW I I+ + + L Sbjct: 199 IEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINYIIRPRL 256 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 257 RKQVAEEFEKNP 268 >gi|170016762|ref|YP_001727681.1| preprotein translocase subunit YidC [Leuconostoc citreum KM20] gi|169803619|gb|ACA82237.1| Preprotein translocase subunit YidC [Leuconostoc citreum KM20] Length = 304 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 103/254 (40%), Gaps = 35/254 (13%) Query: 341 FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVS----TANMKNIQ 393 +I P+ +M+ +++G G AI++ T ++L+ P Q V+ M+ ++ Sbjct: 33 WIGHPLADIMTNIAHVIGGPNGIGWAIIIITAILRLVLLPFFLNQQVNTTINQIKMQTLK 92 Query: 394 PKIDELR----EKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+ID+L+ + Q AM+ LY+ ++++ + G + +Q+PVF +Y I Sbjct: 93 PEIDKLQALSRKAGTTEEQQKASMAMMSLYRENDVSVIGGISFLTMAMQLPVFSGLYSAI 152 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ A F G + P +F + L + + ++ M+ Sbjct: 153 LHAPALKGASFLG----FNLSHPQIVFAIISGLVYLIQAWLA---------------MQH 193 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P K A ++ P++ + +Y+ + +++Q + H GL Sbjct: 194 MPEEQKKTSAAMMFISPIMIFGFAMIASGAIGLYFVVGGLFALIQTLI---QHFQRPGLE 250 Query: 568 DRLRSTFSKNYNSQ 581 R+ F + Sbjct: 251 KRVALEFKIKKTAD 264 >gi|130491697|ref|NP_001076302.1| hypothetical protein LOC562963 [Danio rerio] gi|126631996|gb|AAI34231.1| Zgc:163091 protein [Danio rerio] Length = 469 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 112/319 (35%), Gaps = 35/319 (10%) Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT---TTNFLFAGAKEFPTIHHYEKD 324 ET+ S A A S + P S+T T A + + Sbjct: 84 ETTIQSVSTPSEPPDAAISAPASIPTPAVDPTPSVTPPITEQVAEAPLTALDVLQGVGAE 143 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQY 383 ++ + + L+ + + +G + AI+ T+ + FP+ K Sbjct: 144 ASLSELGLC-----NSTPVGLIQNLLEFMHVSIGLPWWGAIVAGTIVARCAVFPVIVKGQ 198 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY-------KTHNINPLAGCWPILLQ 436 A + N+ P++ +L + ++ + + Y K ++NP G L+Q Sbjct: 199 REAAKLNNVMPEMTKLTNRMNEAKQSGNKFEFSKAYTDLMMFQKKKDVNPFRGFLVPLVQ 258 Query: 437 IPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 P+F + + + E+ W DL AADP I + + + + +G Sbjct: 259 APIFLSFFIALRKMSELPVPSLQTGGLWWFTDLTAADPFYILPI--AVTGTMVAILELGA 316 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + P + + MP V + +FP + YW SN+ S+ Q Sbjct: 317 ESGV------------DNPNLRAMKTVFRIMPFVILPLTINFPTAVFTYWMTSNLFSLAQ 364 Query: 553 QAVIMK-MHGAEIGLIDRL 570 AV+ ++ + +R+ Sbjct: 365 VAVLRHPAVRQKLRIPERI 383 >gi|21356443|ref|NP_648417.1| CG6404, isoform B [Drosophila melanogaster] gi|24662345|ref|NP_729634.1| CG6404, isoform A [Drosophila melanogaster] gi|5052482|gb|AAD38571.1|AF145596_1 BcDNA.GH02220 [Drosophila melanogaster] gi|23093704|gb|AAF50127.2| CG6404, isoform A [Drosophila melanogaster] gi|23093705|gb|AAN11911.1| CG6404, isoform B [Drosophila melanogaster] gi|220943722|gb|ACL84404.1| CG6404-PA [synthetic construct] gi|220953572|gb|ACL89329.1| CG6404-PA [synthetic construct] Length = 441 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 92/252 (36%), Gaps = 27/252 (10%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFF 376 + P F + GW + + + + + I + T+ V+ + F Sbjct: 111 VMDVMNAAGEPSFASIGLGGWSP--VGMVQNCLEFLHCTWDIPWWGTIAIGTLAVRTIIF 168 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP-------QVLQKAMIQLYKTHNINPLAG 429 PL ++A M N P++ L+ K ++ + M+ + +NPL Sbjct: 169 PLVILAQRNSAKMNNNMPQMQMLQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKN 228 Query: 430 CWPILLQIP----VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 L Q P F + ++ + +E W DL ADP + L YL Sbjct: 229 MVVPLAQAPLFISFFMGLRQMANAPVESMRDGGLFWFTDLTMADPFYLLPLITSATLYLT 288 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + +G +S + +L +P+V +FPA ++ YW+ S Sbjct: 289 --IEIGTDSARLSAAN-----------MNTMKYVLRALPIVIFPFTMNFPAAILTYWACS 335 Query: 546 NVISIVQQAVIM 557 N IS+ Q AV+ Sbjct: 336 NFISLGQVAVLR 347 >gi|195069813|ref|XP_001997036.1| GH23226 [Drosophila grimshawi] gi|193906228|gb|EDW05095.1| GH23226 [Drosophila grimshawi] Length = 449 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 91/239 (38%), Gaps = 39/239 (16%) Query: 337 GWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 GW + M + + + I + T+ V+ L FPL ++A M N P+ Sbjct: 136 GWSP--VGMVQQCMEFLHCTWDIPWWGTIAIGTICVRTLIFPLVILAQRNSARMSNNMPQ 193 Query: 396 IDELREKFKQSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIY 444 + L+ K ++ + M+ + +NPL L Q P F + Sbjct: 194 MQVLQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKNMIVPLAQAPLFLSFFMGLR 253 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 ++ + +E W DL ADP + P+I S ++++ Sbjct: 254 QMANTPVESMRDGGLFWFTDLTMADPFYLL-------------------PVITSATLYLT 294 Query: 505 MKMSPPPA------DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +++ A +L +P+V +FPA ++ YW+ SN IS+ Q A++ Sbjct: 295 IELGTDSARLSAANMNTMKYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQVALLR 353 >gi|116630024|ref|YP_815196.1| preprotein translocase subunit YidC [Lactobacillus gasseri ATCC 33323] gi|238853789|ref|ZP_04644155.1| preprotein translocase subunit YidC [Lactobacillus gasseri 202-4] gi|311110346|ref|ZP_07711743.1| membrane protein chaperone OxaA [Lactobacillus gasseri MV-22] gi|116095606|gb|ABJ60758.1| Preprotein translocase subunit YidC [Lactobacillus gasseri ATCC 33323] gi|238833598|gb|EEQ25869.1| preprotein translocase subunit YidC [Lactobacillus gasseri 202-4] gi|311065500|gb|EFQ45840.1| membrane protein chaperone OxaA [Lactobacillus gasseri MV-22] Length = 327 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 109/245 (44%), Gaps = 34/245 (13%) Query: 336 WGW-FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVST----A 387 + W F KP+ +M + +G G AI++ T V+L+ PL Sbjct: 40 YAWVFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 388 NMKNIQPKIDELREKFKQ---SPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPVF 440 + +QP++ ++E K+ + PQ +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKDNNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S E+ + F+G ++ + + T+ L + + G Sbjct: 160 IGIYQAVAYSKELAASSFFG----ISLGQRSIVLTIIATLLYVIQG-------------- 201 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ M P K M L P + F S P L +Y+ +I+I+QQ + + Sbjct: 202 -YLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQVITTFII 260 Query: 561 GAEIG 565 ++ Sbjct: 261 MPKVK 265 >gi|162448266|ref|YP_001621398.1| integral membrane protein [Acholeplasma laidlawii PG-8A] gi|161986373|gb|ABX82022.1| integral membrane protein [Acholeplasma laidlawii PG-8A] Length = 491 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 71/331 (21%), Positives = 131/331 (39%), Gaps = 44/331 (13%) Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE----FPTIHHYE 322 + K +Y A E + S +F F + + + Sbjct: 160 NTKANTEVIKETGANAQKYLATPENYEDNVFKINSNNVLSFEFHDLNDTVQVIKNLSYKP 219 Query: 323 KDLAIPRFEML----IDWGWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFF 376 D +P + + + W + P+ LM +F +L G +FG+ I+ T+ V+ + + Sbjct: 220 ADNQLPINTKMENTWLGYVWDWVFIIPISFLMQFFASLFGLNSFGLGILFATIIVRTIAW 279 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKF--KQSPP--QVLQKAMIQLYKTHNINPLAGCWP 432 P+ K + M QP++ +L+ K+ K+ P Q +Q M+QLYK H I+ L GC+ Sbjct: 280 PIYAKANDMSIKMAVAQPELTKLQNKYALKKDPASQQKMQMEMMQLYKKHGISVL-GCFT 338 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +LQ+P+F A+++ + + AA+ N LFG++ GF V Sbjct: 339 PILQMPIFLAMFQTVYR---------ITVPGGMYAANVNNHKILFGLIDLSAGGFNDVTS 389 Query: 493 WPI--IMSLSMFIQMKMSPP------------------PADKGQAMILNWMPVVFVFALS 532 + + I+ ++M++ +S K + N M + V Sbjct: 390 YVLAAIVGVTMWLLQHLSQKKPSYAKNTGTQVKTEQAEQQAKTMKTVSNVMIGMMVLTTI 449 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + L YW N+ SI Q + K+ + Sbjct: 450 TSVNALGFYWIIGNLFSIGQSFINRKLSEKK 480 >gi|329726436|gb|EGG62899.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU144] Length = 278 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 110/261 (42%), Gaps = 36/261 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN--- 391 G FY K M + + N+G AI+ + V+ + P Q + M+ Sbjct: 29 GIFYNVFVKSMDGFLHILGRVFQDNYGFAIISIVLIVRFILLPFMLIQVKNMHMMREKTK 88 Query: 392 -IQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAI 443 +QP++D +R+K K + Q + +++ Y+++ INPL GC P+L+Q+P+ + Sbjct: 89 VVQPELDAIRDKMKHATSQKERNAANQLLLKKYQSYGINPLKNMLGCLPVLIQMPILMGL 148 Query: 444 YKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y + S + P + W DL D I T+ + +++ ++ +P + Sbjct: 149 YMSLKYPSSHGITEYPHFLWF-DLTQPDL--IMTIIAAIMYFVQPLVNSIHYPKDQRKTY 205 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + ++ + P+ +A A L +YWS S IVQ H Sbjct: 206 YF---------------MMVFSPIFITYASLHSAAALGLYWSISAAFLIVQMHFAH-SHY 249 Query: 562 AEIGLID--RLRSTFSKNYNS 580 ++ L + +L+ +N ++ Sbjct: 250 KKVALHEAKKLKQKLEQNKDN 270 >gi|195021527|ref|XP_001985412.1| GH17044 [Drosophila grimshawi] gi|193898894|gb|EDV97760.1| GH17044 [Drosophila grimshawi] Length = 457 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 91/239 (38%), Gaps = 39/239 (16%) Query: 337 GWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 GW + M + + + I + T+ V+ L FPL ++A M N P+ Sbjct: 136 GWSP--VGMVQQCMEFLHCTWDIPWWGTIAIGTICVRTLIFPLVILAQRNSARMSNNMPQ 193 Query: 396 IDELREKFKQSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIY 444 + L+ K ++ + M+ + +NPL L Q P F + Sbjct: 194 MQVLQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKNMIVPLAQAPLFLSFFMGLR 253 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 ++ + +E W DL ADP + P+I S ++++ Sbjct: 254 QMANTPVESMRDGGLFWFTDLTMADPFYLL-------------------PVITSATLYLT 294 Query: 505 MKMSPPPA------DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +++ A +L +P+V +FPA ++ YW+ SN IS+ Q A++ Sbjct: 295 IELGTDSARLSAANMNTMKYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQVALLR 353 >gi|283471308|emb|CAQ50519.1| membrane protein OxaA [Staphylococcus aureus subsp. aureus ST398] Length = 290 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 118/259 (45%), Gaps = 36/259 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANM 389 G+FY PM ++ + N L N+G+AI++ + ++++ P Y ++ M Sbjct: 30 GFFYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKM 89 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFA 442 K +P++++++EK K++ Q + ++Q+YK +++NP + GC P+L+Q+P+ Sbjct: 90 KVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W DL D I + G+L F + Sbjct: 150 LYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMK 558 ++ K P + M++ P++ ++ S + L +YWS S +VQ I Sbjct: 192 AYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYY 251 Query: 559 MHGAEIGLIDRLRSTFSKN 577 A+ + + + ++ Sbjct: 252 EKVAKKEVQPFIEAYEREH 270 >gi|254993106|ref|ZP_05275296.1| OxaA-like protein precursor [Listeria monocytogenes FSL J2-064] Length = 249 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 32/231 (13%) Query: 337 GWF-YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMK 390 G+F ++ +P + + VG N+GIAI++TT+ ++ L PL K Q + M Sbjct: 32 GFFSTYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMA 91 Query: 391 NIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 +P+IDE++ + K + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y Sbjct: 92 VAKPEIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYY 151 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ A +L + D M + I ++ L+ + Sbjct: 152 AIRGSSEI--ASHTFLWFNLGSPD------------------MVLAIIAGLVYLAQYFVS 191 Query: 506 KMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + P K Q I+ M P++ +F + P+ L +YW+ + Q + Sbjct: 192 MIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLL 242 >gi|225707022|gb|ACO09357.1| Inner membrane protein OXA1L, mitochondrial precursor [Osmerus mordax] Length = 421 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 37/243 (15%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + ++ +F+ +L + AI++ TV ++L FP+ K A + N+ P++ +L K Sbjct: 107 VQNMLEFFHVDLGVPWWGAIVIGTVLARMLVFPVIVKGQREAAKLNNVMPEMTKLTSKMN 166 Query: 405 QSPPQVLQKAMIQLY-------KTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ + + Y K H++NPL G L Q PVF A+ K+ + Sbjct: 167 EAKQSGNKFDFAKAYADLTMFQKKHDVNPLRGFLVPLAQTPVFISFFIALRKMSYHPVPS 226 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---- 509 W DL AADP I P+ ++ +MF +++ Sbjct: 227 MQTGGLFWFTDLTAADPYFIL-------------------PLAVTGTMFFILELGAESGI 267 Query: 510 -PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK-MHGAEIGLI 567 P + + MP + + +FP + YW SN S+ Q A++ + ++ + Sbjct: 268 DNPNMRAMKTVFRIMPFIILPLTINFPTAVFTYWLTSNCFSLGQVALLKHPLVRQKLRIP 327 Query: 568 DRL 570 +++ Sbjct: 328 EKI 330 >gi|126652600|ref|ZP_01724764.1| OxaA-like protein precursor [Bacillus sp. B14905] gi|126590591|gb|EAZ84708.1| OxaA-like protein precursor [Bacillus sp. B14905] Length = 210 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 32/229 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN----MKNIQP 394 F F+ +P+ + + ++ G++ I ++ T+ V+ + PL K + M +I+P Sbjct: 2 FTFLTQPIIYFIHFIHSFTGSYAIGVISITIAVRAILMPLFIKSAKHQKHSKDLMTSIKP 61 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++D L K K S + ++Q+ + +L + L GC PI++Q+PV F++Y I I Sbjct: 62 ELDVLTAKLKNSHDESEKIMVQQKIQELTSDSLKSSLLGCLPIIIQLPVLFSLYYAIKID 121 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + A +L D II + F+Q +S Sbjct: 122 TVI--ASENFLWMNLGTVDIGIS---------------------IIACVIYFMQSWLSLD 158 Query: 511 PADK-GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +++ P++ + PA + IYW+ S ++ VQQ +I K Sbjct: 159 KNQPINMKIMMFINPIMILIFSLFNPAIIPIYWTVSALLLTVQQLIIKK 207 >gi|108712059|gb|ABF99854.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza sativa Japonica Group] Length = 372 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 45/190 (23%), Positives = 88/190 (46%), Gaps = 17/190 (8%) Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLA 466 + +Q +LYK +++PLAGC P L+ IPV+ +Y+ +S E + WI LA Sbjct: 36 KERIQLETARLYKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLA 95 Query: 467 AADPTN-------IFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--- 512 I LF G P + + P+++ +S ++ ++ PP Sbjct: 96 GPTTIAARQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNND 155 Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 +G ++ ++P++ + S P+GL +YW +N++S QQ + K+ GA+ + + + Sbjct: 156 PSQQGAQAVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYI 215 Query: 571 RSTFSKNYNS 580 + + Sbjct: 216 DKLAKEESTN 225 >gi|227889543|ref|ZP_04007348.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus johnsonii ATCC 33200] gi|227850021|gb|EEJ60107.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus johnsonii ATCC 33200] Length = 327 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 109/245 (44%), Gaps = 34/245 (13%) Query: 336 WGW-FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVST----A 387 + W F KP+ +M + +G G AI++ T V+L+ PL Sbjct: 40 YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFAVQLIVMPLRLASQRKMTTQQE 99 Query: 388 NMKNIQPKIDELREKFKQ---SPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPVF 440 + +QP++ ++E K+ + PQ +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S E+ + F+G ++ + I T+ L + + G Sbjct: 160 MGIYQAVAYSKELAASSFFG----ISLGQRSIILTIIATLLYVVQG-------------- 201 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ M P K M L P + F S P L +Y+ +I+I+QQ + + Sbjct: 202 -YLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLITTFVI 260 Query: 561 GAEIG 565 ++ Sbjct: 261 MPKVK 265 >gi|225028842|ref|ZP_03718034.1| hypothetical protein EUBHAL_03129 [Eubacterium hallii DSM 3353] gi|224953838|gb|EEG35047.1| hypothetical protein EUBHAL_03129 [Eubacterium hallii DSM 3353] Length = 428 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 112/306 (36%), Gaps = 81/306 (26%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 GW + + + Y N +G N G+ I++ T+ V+LL PL KQ + +QP Sbjct: 12 GWIATLLGYVMEFIFYCLNFIGIQNIGLCIIIFTIIVRLLMLPLTIKQQKFAKISQVMQP 71 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQ-------------I 437 +I++++ K++ Q + + ++Y+ + NP GC +++Q I Sbjct: 72 EINKIQRKYRNKTDQASMMKQNEEIQKVYEKYGTNPTGGCLQLVVQMPIFLALYQVIRKI 131 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDL-------------------------------- 465 P + K + + + A G I + Sbjct: 132 PAYIPQVKAVYMQVVTAIAGQAGAIDAINKIGKGLKSSYVTSLASDATKNQIIDTLNYFN 191 Query: 466 ------------AAADP--TNIFTLFGILPFY-------LPGFMHVGIW--PIIMSLSMF 502 +A+D T+ + G+ F+ PGF W PI+ +L + Sbjct: 192 ADAWHKLAKAIPSASDVINTSSTHIIGMNDFFAGINVSQTPGFHPSIYWLIPILAALFQY 251 Query: 503 IQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + K PA + MP++ ++ PAGL IYW S + +QQ + Sbjct: 252 LSAKTMKQPELDGNNPAAGMTKSMTVMMPLMSLYFCLVTPAGLGIYWVTSALFQCLQQVI 311 Query: 556 IMKMHG 561 I K Sbjct: 312 INKYMD 317 >gi|213400709|gb|ACJ47003.1| hypothetical protein [Wolbachia endosymbiont of Nasonia longicornis] Length = 171 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 94/172 (54%), Gaps = 3/172 (1%) Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275 EG + D L E Y DI K + S +W G +DKYW + IP K + Sbjct: 1 HEGVLGAF-DNKLEEWTYKDISKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSI 59 Query: 276 KYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 K+ + + ++Q F +ILPG S++ N+ FAGAK+ + Y+ L IP F+ + Sbjct: 60 KHTNVNNTDKFQVDFVKPYKSILPGASVSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAV 119 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 D+G YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL L + Y+S Sbjct: 120 DFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLSLFNRSYISM 171 >gi|226308231|ref|YP_002768191.1| OxaA family protein [Rhodococcus erythropolis PR4] gi|226187348|dbj|BAH35452.1| putative OxaA family protein [Rhodococcus erythropolis PR4] Length = 318 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 101/282 (35%), Gaps = 56/282 (19%) Query: 339 FYFIAKPMFMLMSYFYNLVG----------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F+ P+ ++ +++ + + ++++ +K L F KQ + Sbjct: 2 LDFVYYPVSGILWFWHKVFSLISGSPDNGVVWALSVVFLVFTLKALLFKPFVKQVRTQLV 61 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP+I L++K+ Q L M +L K HN +PL GC P+L+Q PVF +Y V+ Sbjct: 62 MQKLQPQIKALQKKYSGD-RQKLTVEMAKLQKEHNYSPLLGCLPMLVQAPVFIGLYHVLR 120 Query: 449 ISL---EMRHAPFWGWIKDLAAADPTNIFTLFGILP----------FYLPGFMHVG---- 491 H PF + ++ AD N F F P + Sbjct: 121 SFNRTGAASHVPFLSPTEPMSVADNANTANYFFSASDVQSFLDAKLFGAPLSAMISSPAA 180 Query: 492 ------------------IWPIIMSLSMFIQMKMS----------PPPADKGQAMILNWM 523 I +++ + S P + L Sbjct: 181 QLEAFGDVSRISIILVAVPLMIFAAVATHFTSRASIARQVDTGTVNPQTAIMNKLALWVF 240 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 PV + + P +++Y+ +N ++ QQ ++ AE Sbjct: 241 PVGVIAFGAFAPVAILLYFVSNNCWTLGQQHLVYGRIAAEQK 282 >gi|300361213|ref|ZP_07057390.1| membrane protein OxaA 2 [Lactobacillus gasseri JV-V03] gi|300353832|gb|EFJ69703.1| membrane protein OxaA 2 [Lactobacillus gasseri JV-V03] Length = 327 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 109/245 (44%), Gaps = 34/245 (13%) Query: 336 WGW-FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVST----A 387 + W F KP+ +M + +G G AI++ T V+L+ PL Sbjct: 40 YAWVFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 388 NMKNIQPKIDELREKFKQ---SPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPVF 440 + +QP++ ++E K+ + PQ +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKDNNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S E+ + F+G ++ + + T+ L + + G Sbjct: 160 IGIYQAVAYSKELAASSFFG----ISLGQRSIVLTIIATLLYVIQG-------------- 201 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ M P K M L P + F S P L +Y+ +I+I+QQ + + Sbjct: 202 -YLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQVITTFII 260 Query: 561 GAEIG 565 ++ Sbjct: 261 MPKVK 265 >gi|77414384|ref|ZP_00790539.1| SpoIIIJ family protein [Streptococcus agalactiae 515] gi|77159574|gb|EAO70730.1| SpoIIIJ family protein [Streptococcus agalactiae 515] Length = 266 Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 32/244 (13%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNIQPKIDELR 400 M L++YF G FG+AI++ T+ V+++ PL Q M +P + + Sbjct: 1 MANLITYFAQHQGLGFGVAIIIVTIIVRVIILPLGLYQSWKASYQAEKMAYFKPLFEPIN 60 Query: 401 EKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVISISLEMR 454 E+ + + Q Q ++ + + ++ G C P+L+Q+P F AI+ + + Sbjct: 61 ERLRNAKTQEEKLAAQTELMTAQRENGLSMFGGIGCLPLLIQMPFFSAIFFAARYTPGVS 120 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 A F G + T I I+ + ++ M+ P + Sbjct: 121 SATFLGLNLGQKSLTLTVIIA-------------------ILYFVQSWLSMQGVPDEQRQ 161 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MP+ VF S PA + +YW + SI+QQ V + + L ++ + Sbjct: 162 QMKTMMYVMPIAMVFMSISLPASVALYWFIGGIFSIIQQLVTT--YVLKPKLRRKVEEEY 219 Query: 575 SKNY 578 +KN Sbjct: 220 TKNP 223 >gi|229488335|ref|ZP_04382201.1| putative membrane protein [Rhodococcus erythropolis SK121] gi|229323839|gb|EEN89594.1| putative membrane protein [Rhodococcus erythropolis SK121] Length = 317 Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 100/282 (35%), Gaps = 56/282 (19%) Query: 339 FYFIAKPMFMLMSYFYNLVG----------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F+ P+ ++ +++ + + ++++ +K L F KQ + Sbjct: 2 LDFVYYPVSGILWFWHKVFSLVSGSPDNGVVWALSVVFLVFTLKALLFKPFVKQVRTQLV 61 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP+I L++K+ Q L M +L K HN +PL GC P+L+Q PVF +Y V+ Sbjct: 62 MQKLQPQIKALQKKYSGD-RQKLTVEMAKLQKEHNYSPLLGCLPMLVQAPVFIGLYHVLR 120 Query: 449 ISL---EMRHAPFWGWIKDLAAADPTNIFTLFGILP----------FYLPGFMHVG---- 491 H PF + ++ AD N F F P + Sbjct: 121 SFNRTGAASHVPFLSPTEPMSVADNANTANYFFSASDVQSFLDAKLFGAPLSAMISSPAA 180 Query: 492 ------------------IWPIIMSLSMFIQMKMS----------PPPADKGQAMILNWM 523 I +++ + S P + L Sbjct: 181 QLEAFGDVSRISIILVAVPLMIFAAVATHFTSRASIARQVDTGTVNPQTAIMNKLALWVF 240 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 PV + + P +++Y+ +N ++ QQ + AE Sbjct: 241 PVGVIAFGAFAPVAILLYFVSNNCWTLGQQHFVYGRIAAEQK 282 >gi|323351007|ref|ZP_08086664.1| SpoIIIJ family protein [Streptococcus sanguinis VMC66] gi|322122731|gb|EFX94440.1| SpoIIIJ family protein [Streptococcus sanguinis VMC66] Length = 307 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 98/252 (38%), Gaps = 30/252 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I +PM + +F G +G+AI++ T+ V+++ PL Q + M Sbjct: 36 IWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYF 95 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P ++++ K + Q Q+ ++ K + ++ G C P+L+Q+P F A++ Sbjct: 96 KPIFAPIQDRIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFA 155 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + WIKDLA +D T + +Y+ + + Sbjct: 156 AQYTQGVAGSS-FLWIKDLAKSDWA--LTAIVGILYYIQSVLSLHG-------------- 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + P++ V PA + +YW I I+ + + L Sbjct: 199 IEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINYIIRPRL 256 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 257 RKQVAEEFEKNP 268 >gi|268319894|ref|YP_003293550.1| membrane protein [Lactobacillus johnsonii FI9785] gi|262398269|emb|CAX67283.1| membrane protein [Lactobacillus johnsonii FI9785] Length = 327 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 109/245 (44%), Gaps = 34/245 (13%) Query: 336 WGW-FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVST----A 387 + W F KP+ +M + +G G AI++ T V+L+ PL Sbjct: 40 YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 388 NMKNIQPKIDELREKFKQ---SPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPVF 440 + +QP++ ++E K+ + PQ +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S E+ + F+G ++ + I T+ L + + G Sbjct: 160 MGIYQAVAYSKELAASSFFG----ISLGQRSIILTVIATLFYVIQG-------------- 201 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ M P K M L P + F S P L +Y+ +I+I+QQ + + Sbjct: 202 -YLSMIGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLITTFVI 260 Query: 561 GAEIG 565 ++ Sbjct: 261 MPKVK 265 >gi|227892815|ref|ZP_04010620.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus ultunensis DSM 16047] gi|227865456|gb|EEJ72877.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus ultunensis DSM 16047] Length = 324 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 107/245 (43%), Gaps = 34/245 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQY----VSTA 387 +GW Y ++ KP+ +M + +++G G I++ TV V+++ PL Q Sbjct: 39 YGWVYQWLGKPLQNIMIHTAHMIGGQNGAGWGIVIITVVVRVILMPLMLIQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKA-----MIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ K Q+ +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQAAMKHKGITPQQQMTLSGWQRELYSKNEMSLTGGIGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ H+ F+G + I T+F ++ Y+ Sbjct: 159 WGIYQAVFYSPQLAHSTFFGISLSQKSLVLAIIATVFTVIQGYISLIGI----------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P K ++ + P++ +F SF L +YW+ N++ IVQQ ++ + Sbjct: 208 --------PEEQKKTMQSMMLFNPIMTLFFSLSFSGALALYWAAGNLVMIVQQIIVTFIL 259 Query: 561 GAEIG 565 ++ Sbjct: 260 TPQVK 264 >gi|160914809|ref|ZP_02077023.1| hypothetical protein EUBDOL_00816 [Eubacterium dolichum DSM 3991] gi|158433349|gb|EDP11638.1| hypothetical protein EUBDOL_00816 [Eubacterium dolichum DSM 3991] Length = 328 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 109/272 (40%), Gaps = 28/272 (10%) Query: 314 EFPTIHHYEKDLAIPR--------FEMLIDWGWF-YFIAKPMFMLMSYFYNLVGNFGIAI 364 + I KD+ F + GWF I P+ L++ + + G+ I Sbjct: 57 DDKEIQKKYKDMKPEDIIQIKKTTFGDAMSEGWFNGLIVWPIAQLIN-ITSSFTDAGVGI 115 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---QSPPQVLQ-KAMIQLYK 420 ++TT+ ++ + F + K V+T M++IQP++++++ K+ ++LQ + M LYK Sbjct: 116 IITTLLIQFIIFLFSIKSQVATQKMQSIQPELNKIQAKYAGRNDDRSKMLQAQEMQALYK 175 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 + INP +Q PV F +Y + + F+G + + + + ++ Sbjct: 176 KNQINPFGTILVTFIQFPVIFGMYYATMRAYAVVSGSFYGIDLTVTPLEGFTSQSWWHVV 235 Query: 481 PFYLPGFMHVGIWPIIMSLS------------MFIQMKMSPPPADKGQAMILNWMPVVFV 528 F L + + + L + Q K S M++ + Sbjct: 236 IFLLMIVFQLVSFKMPQWLQEYRKKKNHVKEKKYAQPKQSG--MAGSMNMMMYMSTGMIA 293 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++P + YW +V+ ++Q ++ K Sbjct: 294 IFAINWPLAMSFYWLVGSVVRVLQNILVHKFF 325 >gi|224142675|ref|XP_002324680.1| inner membrane protein [Populus trichocarpa] gi|222866114|gb|EEF03245.1| inner membrane protein [Populus trichocarpa] Length = 310 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 23/230 (10%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR---E 401 + + +N G N+ +I++TT+ ++ PL Q +T+ + ++P ++E++ E Sbjct: 20 LQHAIDAVHNFTGFNWWASIVVTTLLIRSFTLPLLINQLKATSKLSIVRPHLEEVKQRVE 79 Query: 402 KFKQSPPQVL--QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 + P V QK M +L+K H ++P + +Q PVF + + I+ E + Sbjct: 80 RQGMDPTAVSEGQKEMKKLFKEHGVSPFTPLKGLFIQAPVFISFFLAITNMAEKVPSFKS 139 Query: 460 G---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 G W DL AD IF + L F + + Q M PA Sbjct: 140 GGAFWFVDLTTADDLYIFPVLTALTFLITVECNT-------------QEGMEGNPAAGTM 186 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + + V SFP + YW SN+ S+ V+ K G + L Sbjct: 187 KNVSRALAAASVPLTMSFPKAIFCYWITSNLFSLTYGLVL-KAPGVKEFL 235 >gi|300780162|ref|ZP_07090018.1| preprotein translocase YidC subunit [Corynebacterium genitalium ATCC 33030] gi|300534272|gb|EFK55331.1| preprotein translocase YidC subunit [Corynebacterium genitalium ATCC 33030] Length = 387 Score = 130 bits (328), Expect = 4e-28, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 102/291 (35%), Gaps = 74/291 (25%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ + G ++ +AI+ T +++ Q + M Sbjct: 2 LNFIYWPISAVLWFWHKIFGYIFSPDSGASWLLAIVFLTFTIRIFLVKPMVNQLRAGRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ E+R K+K Q + ++YK +NPLA C L+Q+PVF ++ V+ Sbjct: 62 QELQPQLQEIRAKYKND-QQKMAMETQKVYKEAKMNPLASCIVPLVQLPVFIGLFHVLRS 120 Query: 450 S------------------------------LEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 A +G + P F F Sbjct: 121 FNRTGTGAGGLGMSIEQNRNTANYIFSPEDVQSFLDARIFGIPLSSYMSMPEEQFAAFAP 180 Query: 480 LPFYLPGFMHVGIWPIIMS---------LSMFIQMK------------------------ 506 + F + V + +++ LSM Q K Sbjct: 181 VDFTRMNIIMVALPLVLICVVMTHLNARLSMSRQRKRMAKKKAEDELRGKKPSQDGPLSP 240 Query: 507 -MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M M+L ++P +F + GL+ Y +NV ++VQ ++ Sbjct: 241 EMMETQMKTMNGMMLWFLPATLLFTGFLWHIGLLTYMVSNNVWTLVQTKLV 291 >gi|227502237|ref|ZP_03932286.1| inner membrane protein translocase component YidC [Corynebacterium accolens ATCC 49725] gi|227077061|gb|EEI15024.1| inner membrane protein translocase component YidC [Corynebacterium accolens ATCC 49725] Length = 327 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 108/285 (37%), Gaps = 67/285 (23%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ L+ + +AI+L T +K L Q S+ M Sbjct: 2 LNFIYWPISAVLWFWHWLLSLVMDPAWGITWILAIVLLTWTLKALMVKPTVAQIRSSRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-- 447 + IQPK+ E+R K+ + + Q M ++YK + P+AGC P+L+QIP+F ++ V+ Sbjct: 62 QEIQPKVQEIRAKYGKDQARAAQ-EMQKVYKDAGVRPMAGCLPVLVQIPMFIGLFHVLRS 120 Query: 448 -------------------SISLEMRHAPFWGWIKDLAAADPTNIFTLF----------- 477 SI A + + + IF + Sbjct: 121 FDRTVSVAGGLGHPSGEPMSIEANANTANYIFKPELVQQFLDAKIFGVPLVTNLRLNSPL 180 Query: 478 --GILPFYLPGFMHVGIWPIIMSLSMF-IQMKMSPPPADKGQAMI--------------- 519 G+ F+ V + +I+ L F +M ++ + Q Sbjct: 181 VEGVTTTTQAAFIIVPMIAVIVVLMHFNARMSLNRQEKRRAQGKTSAPQGQNAEMMQQQM 240 Query: 520 -------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 L MP + +F+ +P GL+ Y + V + Q +I Sbjct: 241 AMMSKMMLWVMPAMLIFSGFIWPIGLLFYMLSNTVWTFFQTRIIY 285 >gi|312140437|ref|YP_004007773.1| integral membrane protein [Rhodococcus equi 103S] gi|325675949|ref|ZP_08155632.1| membrane protein OxaA [Rhodococcus equi ATCC 33707] gi|311889776|emb|CBH49093.1| putative integral membrane protein [Rhodococcus equi 103S] gi|325553187|gb|EGD22866.1| membrane protein OxaA [Rhodococcus equi ATCC 33707] Length = 293 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 101/293 (34%), Gaps = 53/293 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F+ P+ ++ +++ G + +A+M ++LL A +Q + M Sbjct: 2 LDFVYYPVSAILWFWHKAFGAALGPDNGFAWALAVMFLVFTLRLLLLGPAIRQIRTGLQM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS- 448 + +QP+I L++K+ Q + M +L + H NPL GC P+L+Q PVF +Y V+ Sbjct: 62 RELQPQIKALQKKYAGD-RQRMALEMQKLQQEHGFNPLMGCLPMLVQAPVFIGLYHVLRS 120 Query: 449 -----------------------ISLEMRHAPFWGWIKDLAAADPTNI---------FTL 476 + + A T I F Sbjct: 121 FNRTGTGHGGLGMTAQDNANTANYIFSPADVQSFLSARLFGAPISTAITSPQSTLESFAA 180 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS----------PPPADKGQAMILNWMPVV 526 G +P +I SL+ + S P ++L P+ Sbjct: 181 HGGVPTVATIAAVAIPLMVIASLATHFNARASVARQEPDASANPQTAIMNKLMLWVFPLG 240 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 + +++YW +N+ + QQ ++ E + R + +N Sbjct: 241 VLVGGPFLMIAILLYWVSNNIWTYAQQHLVFARLDRETAVKQRALAQERQNRR 293 >gi|332359134|gb|EGJ36955.1| SpoIIIJ family protein [Streptococcus sanguinis SK49] Length = 296 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 98/252 (38%), Gaps = 30/252 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I +PM + +F G +G+AI++ T+ V+++ PL Q + M Sbjct: 25 IWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYF 84 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P ++E+ K + Q Q+ +I K + ++ G C P+L+Q+P F A++ Sbjct: 85 KPIFAPIQERIKNAETQEEKMQAQQELIAAQKENGLSMFGGIGCLPLLIQMPFFSALFFA 144 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + WIKDLA +D T + +Y+ + + Sbjct: 145 AQYTQGVAGSS-FLWIKDLAKSDWA--LTAIVGILYYIQSVLSLHG-------------- 187 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + P++ V PA + +YW I I+ + + L Sbjct: 188 IEDETQRNSMKQASYMSPIMIVAFSFLSPAAVTLYWVVGGFIQII--QQFIINYIIRPRL 245 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 246 RKQVAEEFEKNP 257 >gi|227485753|ref|ZP_03916069.1| inner membrane insertion protein [Anaerococcus lactolyticus ATCC 51172] gi|227236308|gb|EEI86323.1| inner membrane insertion protein [Anaerococcus lactolyticus ATCC 51172] Length = 236 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 108/238 (45%), Gaps = 21/238 (8%) Query: 339 FYFIAKPMFMLMSYFYNLVGN----------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F FIA + LM Y+ + + IAI++ T+ V L+ P+ Sbjct: 2 FKFIANILGKLMRILYDNIATNFTEPKTISFYAIAIIIMTLLVSLISIPVTISTQKQAEK 61 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-LAGCWPILLQIPVFFAIYKVI 447 ++ +PK+DE+++K+ QVLQK M +LYK + P L+GC P+++Q+ V F +++++ Sbjct: 62 TRSFKPKMDEIQKKYGYD-QQVLQKKMQELYKQEGVTPGLSGCLPMIIQLLVLFGLFEMM 120 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + + I+ T+ + + +L F + + L+ +K Sbjct: 121 RNTGKYVFPEGLNHIR-------TDFYWVPDLLKADPLWFGLPLLTSLSQLLTTLFSIKT 173 Query: 508 SPPPADKG--QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P ++ +P+VF F PAGL +Y++ S+V ++ V+ + Sbjct: 174 NPQQQQAMGSMNTMMLVLPLVFFFTFRQLPAGLPLYYTLSSVFRLLIMVVMHLAMKGK 231 >gi|298695364|gb|ADI98586.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus subsp. aureus ED133] Length = 290 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 118/259 (45%), Gaps = 36/259 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANM 389 G+FY PM ++ + N L N+G+AI++ + ++++ P Y ++ M Sbjct: 30 GFFYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKM 89 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFA 442 K +P++++++EK K++ Q + +IQ+YK +++NP + GC P+L+Q+P+ Sbjct: 90 KVAKPEVEKIQEKVKRARTQEEKMAANQELIQVYKKYDMNPIKSMLGCLPMLIQLPIIMG 149 Query: 443 IYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y V+ L + P + W DL D I + G+L F + Sbjct: 150 LYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF----------------IQ 191 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMK 558 ++ K P + M++ P++ ++ S + L +YWS S +VQ I Sbjct: 192 AYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYY 251 Query: 559 MHGAEIGLIDRLRSTFSKN 577 A+ + + + ++ Sbjct: 252 EKVAKKEVQPFIEAYEREH 270 >gi|295693356|ref|YP_003601966.1| preprotein translocase subunit yidc [Lactobacillus crispatus ST1] gi|295031462|emb|CBL50941.1| Preprotein translocase subunit YidC [Lactobacillus crispatus ST1] Length = 321 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 108/265 (40%), Gaps = 41/265 (15%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQY----VSTA 387 +GW Y ++ +P+ +M +++G G I++ TV V+++ PL Q Sbjct: 39 YGWVYQWLGRPLQNIMIQTAHMIGGDNGAGWGIVIITVVVRVILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ + L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ + F+G + I T+F ++ Y+ Sbjct: 159 WGIYQAVFYSPQLAQSKFFGISLSSKSVVLAIIATVFTVIQGYISLIGI----------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--- 557 P K ++ P++ +F SF L +YW+ N++ I+QQ ++ Sbjct: 208 --------PEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIIQQVIVTFVL 259 Query: 558 ----KMHGAEIGLIDRLRSTFSKNY 578 K H A+ + + +K Sbjct: 260 TPSVKKHIADELKDKPIETVVTKEK 284 >gi|306830170|ref|ZP_07463354.1| SpoIIIJ family protein [Streptococcus mitis ATCC 6249] gi|304427696|gb|EFM30792.1| SpoIIIJ family protein [Streptococcus mitis ATCC 6249] Length = 312 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 31/251 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNIQ 393 + F+ PM + YF G FG+AI++ T+ V+L+ PL Q + M ++ Sbjct: 41 WDFLGAPMGEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMNALK 100 Query: 394 PKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 ++ + + K++ Q Q+A+ K H I+ L G C+PIL+Q+P F AIY Sbjct: 101 HVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMLGGVGCFPILIQMPFFSAIYFAA 160 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++ + + F G DL + P+ I F + +YL + + + Sbjct: 161 QLTEGVASSTFLGI--DLGS--PSMILVAFAGILYYLQSILSLHG--------------V 202 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 + ++ P++ V PA + +YW + I+QQ ++ + L Sbjct: 203 EDEMQREQLKKMIYMSPLMIVVFSFFSPASVTLYWVVGGFMMILQQFIVN--YVVRPKLR 260 Query: 568 DRLRSTFSKNY 578 ++R F+KN Sbjct: 261 KKVREEFAKNP 271 >gi|242371581|ref|ZP_04817155.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis M23864:W1] gi|242350701|gb|EES42302.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis M23864:W1] Length = 286 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 118/264 (44%), Gaps = 35/264 (13%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVST----AN 388 D +F +PM L+ + N V N +G+AI++ + ++L+ P Y ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFNNDYGLAIIILVLVIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + ++++YK +++NP+ GC P+L+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F + Sbjct: 149 GLYFVLKDKLVSGLSAHPHFLWF-NLTKPD-IWITIIAGVLYF----------------I 190 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IM 557 ++ K P + M++ P++ ++ + L +YWS S + ++Q + Sbjct: 191 QAYVSSKTMPQEQRQMGYMMMIVSPIMIIWISLQASSALGLYWSVSALFLVIQTHFANVY 250 Query: 558 KMHGAEIGLIDRLRSTFSKNYNSQ 581 A+ + + ++ S+ Sbjct: 251 YSKLAKKEVQPFIEQYEKEHNPSK 274 >gi|227877759|ref|ZP_03995793.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus crispatus JV-V01] gi|256850088|ref|ZP_05555518.1| preprotein translocase subunit YidC [Lactobacillus crispatus MV-1A-US] gi|262047376|ref|ZP_06020333.1| preprotein translocase, YidC subunit [Lactobacillus crispatus MV-3A-US] gi|227862662|gb|EEJ70147.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus crispatus JV-V01] gi|256713060|gb|EEU28051.1| preprotein translocase subunit YidC [Lactobacillus crispatus MV-1A-US] gi|260572350|gb|EEX28913.1| preprotein translocase, YidC subunit [Lactobacillus crispatus MV-3A-US] Length = 321 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 108/265 (40%), Gaps = 41/265 (15%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQY----VSTA 387 +GW Y ++ +P+ +M +++G G I++ TV V+++ PL Q Sbjct: 39 YGWVYQWLGRPLQNIMIQTAHMIGGDNGAGWGIVIITVVVRVILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ + L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ + F+G + I T+F ++ Y+ Sbjct: 159 WGIYQAVFYSPQLAQSKFFGISLSSKSVVLAIIATVFTVIQGYISLIGI----------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--- 557 P K ++ P++ +F SF L +YW+ N++ IVQQ ++ Sbjct: 208 --------PEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIVQQVIVTFVL 259 Query: 558 ----KMHGAEIGLIDRLRSTFSKNY 578 K H A+ + + +K Sbjct: 260 TPSVKKHIADELKDKPIETVVTKEK 284 >gi|293380720|ref|ZP_06626768.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus crispatus 214-1] gi|290922684|gb|EFD99638.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus crispatus 214-1] Length = 321 Score = 130 bits (327), Expect = 6e-28, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 108/265 (40%), Gaps = 41/265 (15%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQY----VSTA 387 +GW Y ++ +P+ +M ++G G I++ TV V+++ PL Q Sbjct: 39 YGWVYQWLGRPLQNIMIQTAQMIGGDNGAGWGIVIITVVVRVILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ + L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ + F+G + I T+F ++ Y+ Sbjct: 159 WGIYQAVFYSPQLAQSKFFGISLSSKSVVLAIIATVFTVIQGYISLIGI----------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--- 557 P K ++ P++ +F SF L +YW+ SN++ IVQQ ++ Sbjct: 208 --------PEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAASNLVMIVQQVIVTFVL 259 Query: 558 ----KMHGAEIGLIDRLRSTFSKNY 578 K H A+ + + +K Sbjct: 260 TPSVKKHIADELKDKPIETVVTKEK 284 >gi|327462013|gb|EGF08342.1| SpoIIIJ family protein [Streptococcus sanguinis SK1057] Length = 307 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 97/252 (38%), Gaps = 30/252 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I +PM + +F G +G+AI++ T+ V+++ PL Q + M Sbjct: 36 IWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNYF 95 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 + ++E+ K + Q Q+ ++ K + ++ G C P+L+Q+P F A++ Sbjct: 96 KSIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFFA 155 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + + WIKDLA +D T + +Y+ + + Sbjct: 156 AQYTQGVAGSS-FLWIKDLAKSDLA--LTAIVGILYYIQSVLSLHG-------------- 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + P++ V PA + +YW I I+ + + L Sbjct: 199 IEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINYIIRPRL 256 Query: 567 IDRLRSTFSKNY 578 ++ F KN Sbjct: 257 RKQVAEEFEKNP 268 >gi|21325713|dbj|BAC00334.1| Preprotein translocase subunit YidC [Corynebacterium glutamicum ATCC 13032] Length = 434 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 103/283 (36%), Gaps = 50/283 (17%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + P+ +M ++ L+ N + ++ + ++ + P + Y S Sbjct: 14 LDILIYPVSGVMKLWHLLLHNVAGLDDSLAWFFSLFGLVITIRAIIAPFTWQMYKSGRTA 73 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYK 445 +I+P LRE++K + + + + L K + INPLAGC P L+QIP+ +Y Sbjct: 74 AHIRPHRAALREEYKGKYDEASIRELQKRQNDLNKEYGINPLAGCVPGLIQIPIVLGLYW 133 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFG--------------------------- 478 + + + P + + Sbjct: 134 ALLRMARPEGGLENPVFQSIGFLTPEEVESFLAGRVSNVPLPAYVSMPTEQLKYLSTTQA 193 Query: 479 -ILPFYLPGFMHVGIW-PIIMSLSMF--IQMKMSPPPADKGQAMILNWMPVVFVFALSS- 533 +L F LP F+ I I M++SM+ Q G + M ++ S Sbjct: 194 EVLSFVLPLFITAAILTAINMAMSMYRSFQTNDYASGFSNGMLKFMIVMSILAPIFPLSL 253 Query: 534 -----FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 FP + +YW +N+ +++Q ++M + + L D + Sbjct: 254 GLTGPFPTAIALYWVSNNLWTLLQTIIMMVILERKYPLTDDFK 296 >gi|169826543|ref|YP_001696701.1| membrane protein oxaA 2 [Lysinibacillus sphaericus C3-41] gi|168991031|gb|ACA38571.1| Membrane protein oxaA 2 precursor [Lysinibacillus sphaericus C3-41] Length = 210 Score = 130 bits (326), Expect = 7e-28, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 32/229 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN----MKNIQP 394 F F+ +P+ + + ++ G++ I ++ T+ V+++ PL K + M I+P Sbjct: 2 FTFLTQPIIYFIHFIHSFTGSYAIGVISITIAVRVILMPLFIKSAKHQKHSKELMTVIKP 61 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++D L K K S + +Q+ + +L + L GC PI++Q+PV F++Y I + Sbjct: 62 ELDVLTAKLKNSNDESEKITVQQKIQELTSDSLKSSLLGCLPIIIQLPVLFSLYYAIKLD 121 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + A +L D II + F+Q +S Sbjct: 122 TVI--ASENFLWMNLGTVDIGIS---------------------IIACVIYFMQSWLSLD 158 Query: 511 PADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +L ++ P++ + PA + IYW+ S ++ ++QQ +I K Sbjct: 159 KNQPMNVKVLVFINPIMILIFSLFNPAIIPIYWTVSALLLMIQQLIIKK 207 >gi|260584053|ref|ZP_05851801.1| membrane protein OxaA 2 [Granulicatella elegans ATCC 700633] gi|260158679|gb|EEW93747.1| membrane protein OxaA 2 [Granulicatella elegans ATCC 700633] Length = 314 Score = 130 bits (326), Expect = 8e-28, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 113/259 (43%), Gaps = 35/259 (13%) Query: 336 WGWFY-FIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANM 389 +G Y ++A P ++++ + + GN+ I+IM+ ++ V+++ P KQ + M Sbjct: 34 YGIVYDYLAVPTQTILNWIASAIGGNYVISIMIVSIVVRIILMPTMFKQMKTMLMNQEKM 93 Query: 390 KNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPL----AGCWPILLQIPVFF 441 ++P ID++ E++ +P +Q+ + +Y+ +N++ +GC P+L+ +PV+ Sbjct: 94 ALLKPYIDKMNERYGDNPTPEQRMEVQQYTMDIYRLNNVSLTGGVASGCLPVLVTMPVYS 153 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A+Y I S E+ ++ F G + YLP + + +I Sbjct: 154 ALYNAILYSPEISNSSFMG----------------VSLGSTYLPIAIATAVIYLIQG--- 194 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +I L MPV+ + AG+ IY+ S + +I+Q + + Sbjct: 195 YISQLYMDETQKAQAKATLFLMPVMMLMFTVGTAAGIGIYFFTSGLTAILQTWIQNQFIR 254 Query: 562 AEIGLIDRLRSTFSKNYNS 580 ++ + + NS Sbjct: 255 PKVK--AEIDAELEAQGNS 271 >gi|327285652|ref|XP_003227547.1| PREDICTED: mitochondrial inner membrane protein OXA1L-like [Anolis carolinensis] Length = 421 Score = 130 bits (326), Expect = 8e-28, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 36/229 (15%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + VG + AI+ TV + L FPL K + N P+I +L + Sbjct: 118 IQNLLECLHVDVGLPWWGAIVAGTVVARCLVFPLIVKGQREAVKLNNHLPQITQLTTRMN 177 Query: 405 QSPPQVLQKAMIQLY-------KTHNINPLAGCWPILLQIPVFFAIYKVISISLEM---- 453 ++ + + Y KTHN+NPL G L+Q P+F + + + E+ Sbjct: 178 EAKQSGNKFEFAKAYSDLALYQKTHNVNPLRGFLVPLVQAPIFISFFIALRKMAELPVPS 237 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS----- 508 W DL AADP I P+ ++++M+ +++ Sbjct: 238 MQTGGLWWFADLTAADPYYIL-------------------PLAVTVTMWAILELGAESGV 278 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P + + MP+ + SFP + YW SN+ S+VQ V+ Sbjct: 279 SNPNLRVMKTVFRVMPIAILPLTISFPTAIFTYWMTSNLFSLVQVGVLR 327 >gi|314934160|ref|ZP_07841521.1| putative lipoprotein [Staphylococcus caprae C87] gi|313653065|gb|EFS16826.1| putative lipoprotein [Staphylococcus caprae C87] Length = 290 Score = 130 bits (326), Expect = 8e-28, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 118/262 (45%), Gaps = 36/262 (13%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVST----AN 388 D +F +PM L+ + N V N +G+AI++ + ++L+ P Y ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFNNDYGLAIIILVLVIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + ++++YK +++NP+ GC P+L+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F + Sbjct: 149 GLYFVLKDKLVNGLSDHPHFLWF-NLTKPD-IWITIIAGVLYF----------------V 190 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IM 557 ++ K P + M++ P++ ++ + L +YWS S + ++Q + Sbjct: 191 QAYVSSKTMPQEQRQMGYMMMIVSPIMIIWISLQASSALGLYWSVSALFLVIQTHFANLY 250 Query: 558 KMHGAEIGLIDRLRSTFSKNYN 579 A+ + + + K +N Sbjct: 251 YSKLAKKEVQPFIE-QYEKEHN 271 >gi|296139617|ref|YP_003646860.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella paurometabola DSM 20162] gi|296027751|gb|ADG78521.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella paurometabola DSM 20162] Length = 287 Score = 130 bits (326), Expect = 8e-28, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 96/271 (35%), Gaps = 53/271 (19%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + P+ L+ ++ + G + ++++ V+ + + + Sbjct: 2 LDVVYYPISALLWLWHRVFGAFLGADNGFAWALSVVFLVFTVRAVLLWPGLVSARAGRRL 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS- 448 + ++P++D+LR K + P Q L +L + H + PL GC P L QIPVFF +Y V+ Sbjct: 62 ERMRPELDKLRRKHGKDP-QKLALETQKLQREHGVRPLLGCLPALAQIPVFFGLYHVLRS 120 Query: 449 -----------------------ISLEMRHAPFWGWIKDLAAADPTNI---------FTL 476 + + A +I F Sbjct: 121 FNRTGTGLGQLGLTPDQNANTANYVFSATDVQSFLSARLFGAPISVSISSSDTVLASFAQ 180 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMK----------MSPPPADKGQAMILNWMPVV 526 FG +P I L+ I + S +D + ++L MP+ Sbjct: 181 FGGIPSLTTIAAVAIPLMAIACLATHINARFSVRHQAIDPTSAMQSDLMRTLMLWVMPLG 240 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + P +++YW +NV + QQ ++ Sbjct: 241 SIISGPILPIAILLYWVANNVWTYGQQQLVH 271 >gi|223043994|ref|ZP_03614035.1| membrane protein OxaA 2 [Staphylococcus capitis SK14] gi|222442709|gb|EEE48813.1| membrane protein OxaA 2 [Staphylococcus capitis SK14] Length = 290 Score = 129 bits (325), Expect = 9e-28, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 118/262 (45%), Gaps = 36/262 (13%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVST----AN 388 D +F +PM L+ + N V N +G+AI++ + ++L+ P Y ++ Sbjct: 29 DGFFFNTFVQPMKHLLQWLGNDVFNNDYGLAIIILVLVIRLILLPFMLSNYKNSHMMREK 88 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFF 441 MK +P++D ++EK K++ Q + ++++YK +++NP+ GC P+L+Q+P+ Sbjct: 89 MKVAKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIM 148 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W +L D I + G+L F + Sbjct: 149 GLYFVLKDKLVNGLSDHPHFLWF-NLTKPD-IWITIIAGVLYF----------------V 190 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IM 557 ++ K P + M++ P++ ++ + L +YWS S + ++Q + Sbjct: 191 QAYVSSKTMPQEQRQMGYMMMIVSPIMIIWISLQASSALGLYWSVSALFLVIQTHFANMY 250 Query: 558 KMHGAEIGLIDRLRSTFSKNYN 579 A+ + + + K +N Sbjct: 251 YSKLAKKEVQPFIE-QYEKEHN 271 >gi|293400061|ref|ZP_06644207.1| stage III sporulation protein J [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306461|gb|EFE47704.1| stage III sporulation protein J [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 329 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 97/245 (39%), Gaps = 17/245 (6%) Query: 330 FEMLIDWGWFY-FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F +D GWF+ I P+ L+++ N + GI I+ T ++LL F + K V+ Sbjct: 81 FSDAMDEGWFHGIIVYPIAQLINWVANFT-DAGIGIIAATFLIQLLIFLFSIKSQVANQR 139 Query: 389 MKNIQPKIDELREKFK---QSPPQVLQ-KAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 M+ +QP++ +++ K+ ++ Q + M LY + INP +Q PV +Y Sbjct: 140 MQALQPEMQKIQAKYAGRTDDRSKMAQAQEMQALYSKYKINPFGTLLITFIQFPVILGMY 199 Query: 445 KVISISLEMRHAPFWGWI-----------KDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 + + + F G +A + LF +L F +P ++ Sbjct: 200 QATMRAYSVVTGHFAGINLAKTPIEGLKEGQIAFGVIFILMVLFQLLSFKMPQWLQEHRK 259 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P M++ + ++P G+ YW ++++ + Q Sbjct: 260 KKQHVKEKKYAEPKKQPGMMGSMNMMMYMSTAMIAIFAINWPLGMSFYWLVNSIVRVGQN 319 Query: 554 AVIMK 558 +I K Sbjct: 320 LLIHK 324 >gi|314935647|ref|ZP_07842999.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80] gi|313656212|gb|EFS19952.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80] Length = 280 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 103/245 (42%), Gaps = 33/245 (13%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS----TANMKNI 392 ++ KPM L+ + N+G+AI++ ++L+ PL Q + + + Sbjct: 30 FYTVFVKPMDDLLHVLGHAFNENYGLAIIVIVFILRLILMPLMCIQVKNIHVIRGKTEVV 89 Query: 393 QPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYK 445 +P+I++++EK K++ + K +++ Y + INP G +PIL+QIP+ +Y Sbjct: 90 KPEINKIQEKIKEAQSPEERRAANKLLMKKYNEYGINPFKNLIGTFPILIQIPILLGLYT 149 Query: 446 VISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 I + P + W I T+ + +++ ++ +P S ++ Sbjct: 150 SIKYPTSGGITQHPHFLWFN---LMHTDIIMTIIAAVMYFIQPLVNSIHYPKNERRSYYV 206 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ P+ +A + L +YW+ S I+Q H A+ Sbjct: 207 ---------------MMVLSPLFITYASLHSASALSLYWAISATFLIIQMHFAH-SHYAK 250 Query: 564 IGLID 568 +G I+ Sbjct: 251 VGKIE 255 >gi|228474645|ref|ZP_04059376.1| putative membrane protein [Staphylococcus hominis SK119] gi|228271308|gb|EEK12676.1| putative membrane protein [Staphylococcus hominis SK119] Length = 280 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 102/245 (41%), Gaps = 33/245 (13%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS----TANMKNI 392 ++ KPM L+ + N+G+AI++ ++L+ PL Q + + Sbjct: 30 FYTVFVKPMDDLLHVLGHAFNENYGLAIIVIVFILRLILMPLMCIQVKNIHVIRGKTDVV 89 Query: 393 QPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYK 445 +P+I++++EK K++ + K +++ Y + INP G +PIL+QIP+ +Y Sbjct: 90 KPEINKIQEKIKEAQSPEERRAANKLLMKKYNEYGINPFKNLIGTFPILIQIPILLGLYT 149 Query: 446 VISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 I + P + W I T+ + +++ ++ +P S ++ Sbjct: 150 SIKYPTSGGITQHPHFLWFN---LMHTDIIMTIIAAVMYFIQPLVNSIHYPKNERRSYYV 206 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ P+ +A + L +YW+ S I+Q H A+ Sbjct: 207 ---------------MMVLSPLFITYASLHSASALSLYWAISATFLIIQMHFAH-SHYAK 250 Query: 564 IGLID 568 +G I+ Sbjct: 251 VGKIE 255 >gi|81428992|ref|YP_395992.1| membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei 23K] gi|78610634|emb|CAI55685.1| Membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei 23K] Length = 329 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 101/251 (40%), Gaps = 34/251 (13%) Query: 341 FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVST----ANMKNIQ 393 +IA P+ +M + G +G AI++ T V+++ PL Q + ++ Sbjct: 47 YIAVPLQHIMERIADFFGGINGYGWAIIIITFVVRMILLPLMLNQSNKMTAQQEKTRRLK 106 Query: 394 PKIDELREKFK----QSPPQVLQKAMIQLYKTHN--INPLAGCWPILLQIPVFFAIYKVI 447 P++D ++ + K L + M+++YK ++ + P GC +L+Q+P+F +Y+ I Sbjct: 107 PQLDIVQAQQKVATTPEEKAELSQLMMKVYKENDSSMMPSLGCLTLLIQLPIFSGLYQAI 166 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S E+ + F+G + P I T+ L + + + Sbjct: 167 QYSPEISSSHFFG----IGLGQPNIIITIIATLFYVGQSALSLVG--------------- 207 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P K + P + F PAGL +Y+ +I I+QQ + + + Sbjct: 208 MPAEQKKQMQTTVLMSPAITFFISLFAPAGLALYFLAGGMIMIIQQMITTFIIMPRVK-- 265 Query: 568 DRLRSTFSKNY 578 R+ + Sbjct: 266 KRIDQEIKEKP 276 >gi|217928118|gb|ACK57254.1| CG6404-like protein [Drosophila affinis] Length = 305 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 25/219 (11%) Query: 350 MSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 M + + + AI + T+ V+ + FPL ++A M N P++ L+ K ++ Sbjct: 100 MEFLHCTWELPWWGAIAVGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQLLQLKMTEARQ 159 Query: 409 -------QVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIYKVISISLEMRHAP 457 + M+ + +NPL L Q P F + ++ + ++ Sbjct: 160 SGNAIESARYAQEMMLFMRDKGVNPLKNMIVPLAQAPLFISFFMGLRQMANTPVDSMRDG 219 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 W +DL ADP I L YL + +G +S + Sbjct: 220 GLWWFQDLTLADPFYILPLITSATLYLT--IEIGTDSARLSAAN-----------MNTMK 266 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +L +P+V +FPA ++ YW+ SN IS+ Q AV+ Sbjct: 267 YVLRALPLVIFPFTMNFPAAILTYWACSNFISLGQVAVL 305 >gi|258614348|ref|ZP_05712118.1| integral membrane protein [Enterococcus faecium DO] Length = 222 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 86/205 (41%), Gaps = 27/205 (13%) Query: 383 YVSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLA--GCWPILLQ 436 + + M+ ++P+++ ++K K + Q M Q+Y+ + ++ GC P+L+Q Sbjct: 1 MIQSEKMQALKPQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQ 60 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 +P+F A+Y + +R + F+G DL + P+ + + + L G++ P Sbjct: 61 MPIFSALYFTARYTEGIRESSFYGI--DLGS--PSMVLVAIAGVAYLLQGYISTIGIP-- 114 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 K +L P + VF S PAG+ +YW V S +Q + Sbjct: 115 -------------EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFIT 161 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581 M + L ++ +N Q Sbjct: 162 NVMM--KPRLKAQVAEELKQNPPKQ 184 >gi|19554125|ref|NP_602127.1| putative inner membrane protein translocase component YidC [Corynebacterium glutamicum ATCC 13032] gi|62391778|ref|YP_227180.1| inner membrane protein translocase component YidC [Corynebacterium glutamicum ATCC 13032] gi|38503052|sp|Q8NLK2|OXAA_CORGL RecName: Full=Membrane protein oxaA gi|41327120|emb|CAF20964.1| putative preprotein translocase subunit YidC, SpoIIIJ homolog [Corynebacterium glutamicum ATCC 13032] Length = 422 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 103/283 (36%), Gaps = 50/283 (17%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + P+ +M ++ L+ N + ++ + ++ + P + Y S Sbjct: 2 LDILIYPVSGVMKLWHLLLHNVAGLDDSLAWFFSLFGLVITIRAIIAPFTWQMYKSGRTA 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYK 445 +I+P LRE++K + + + + L K + INPLAGC P L+QIP+ +Y Sbjct: 62 AHIRPHRAALREEYKGKYDEASIRELQKRQNDLNKEYGINPLAGCVPGLIQIPIVLGLYW 121 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFG--------------------------- 478 + + + P + + Sbjct: 122 ALLRMARPEGGLENPVFQSIGFLTPEEVESFLAGRVSNVPLPAYVSMPTEQLKYLSTTQA 181 Query: 479 -ILPFYLPGFMHVGIW-PIIMSLSMF--IQMKMSPPPADKGQAMILNWMPVVFVFALSS- 533 +L F LP F+ I I M++SM+ Q G + M ++ S Sbjct: 182 EVLSFVLPLFITAAILTAINMAMSMYRSFQTNDYASGFSNGMLKFMIVMSILAPIFPLSL 241 Query: 534 -----FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 FP + +YW +N+ +++Q ++M + + L D + Sbjct: 242 GLTGPFPTAIALYWVSNNLWTLLQTIIMMVILERKYPLTDDFK 284 >gi|256843612|ref|ZP_05549100.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN] gi|312984343|ref|ZP_07791685.1| hypothetical protein LBKG_02299 [Lactobacillus crispatus CTV-05] gi|256615032|gb|EEU20233.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN] gi|310894268|gb|EFQ43348.1| hypothetical protein LBKG_02299 [Lactobacillus crispatus CTV-05] Length = 321 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 107/265 (40%), Gaps = 41/265 (15%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQY----VSTA 387 +GW Y ++ +P+ +M ++G G I++ TV V+++ PL Q Sbjct: 39 YGWVYQWLGRPLQNIMIQTAQMIGGDNGAGWGIVIITVVVRVILMPLMLVQQNKSVRQQE 98 Query: 388 NMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ ++ + L +LY + ++ G C P+++Q+P+ Sbjct: 99 KMARLQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCLPLIIQLPIM 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + IY+ + S ++ + F+G + I T+F ++ Y+ Sbjct: 159 WGIYQAVFYSPQLAQSKFFGISLSSKSVVLAIIATVFTVIQGYISLIGI----------- 207 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--- 557 P K ++ P++ +F SF L +YW+ N++ IVQQ ++ Sbjct: 208 --------PEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIVQQVIVTFVL 259 Query: 558 ----KMHGAEIGLIDRLRSTFSKNY 578 K H A+ + + +K Sbjct: 260 TPSVKKHIADELKDKPIETVVTKEK 284 >gi|325291449|ref|YP_004267630.1| membrane protein insertase, YidC/Oxa1 family [Syntrophobotulus glycolicus DSM 8271] gi|324966850|gb|ADY57629.1| membrane protein insertase, YidC/Oxa1 family [Syntrophobotulus glycolicus DSM 8271] Length = 230 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 11/223 (4%) Query: 340 YFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 F+ M + +NL + +G+AI+L T+ +K++ FPL KQ S M + P Sbjct: 2 SFVVDGMINFLDILFNLTSLVGLPYYGVAIILFTIIIKIILFPLTYKQTASMRKMMELTP 61 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 I ++++K+ + + QK +++LY NP GC P+L+Q+P+ +A YK + I Sbjct: 62 MITDIQKKYAKDKVKANQK-VMELYAKEKANPYMGCLPLLIQMPILWAFYKALMIFPYGN 120 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 A +L + LP + + + + S P A + Sbjct: 121 EASAMFLGFNLTVK-----YGFTPDYHLILPIAAGLSTYLMSKTTSSSTVSASQPESAKQ 175 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q ++L MP + +S P+GL IY N++S +Q I Sbjct: 176 TQKIMLIVMPFFLAYITASVPSGLGIYIITMNIVSAIQTLYIN 218 >gi|197294709|ref|YP_001799250.1| Preprotein translocase subunit YidC [Candidatus Phytoplasma australiense] gi|171854036|emb|CAM12009.1| Preprotein translocase subunit YidC [Candidatus Phytoplasma australiense] Length = 471 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 60/333 (18%), Positives = 127/333 (38%), Gaps = 42/333 (12%) Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 KE + H+ + ++ +I+ + + L G E I Sbjct: 148 KEGTNHTLTNIFHNLEDTKGSEAKLKQISSDKPLELKSKFTLQEGKNE-EIIFFVTNVFL 206 Query: 327 IPRFEMLIDWGWFYFIAKPMF----MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 +F ++W F ++ + + +F + G+ I+LTT+ + L +P+ K Sbjct: 207 PIQFPQYLEWSAFGYLWNVLIVSVGSFLYFFSYPFASLGLGIILTTILFRTLTWPIYTKT 266 Query: 383 YVSTANMKNIQPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 T NM IQP+I+++++K+ + Q +Q ++++Y+ +N + G LQ+P Sbjct: 267 TTFTMNMNLIQPEIEKVKQKYALQSDPASAQKMQLEILKVYRKNNFS-FWGFLVSFLQLP 325 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG-FMHVGIWPIIM 497 +F +I + + + + D G + F P + V + ++ Sbjct: 326 LFISINQTL---------GRFIVPGGIFETDKLIEKPFLGFIKFNQPNHWFVVSLLSFLV 376 Query: 498 SLSMF---------------------IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 L+MF ++ K ++K ++ +M ++ V S P Sbjct: 377 GLTMFFLNKVSFKKPDYLKKPTHHLTLEQKEKAKQSEKTMKIMSWFMILMMVLFSCSNPI 436 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 L +YW N +I Q + K + L+ Sbjct: 437 -LSLYWIVGNTYTIFQTLITRKNMEKKYFLLKN 468 >gi|290581139|ref|YP_003485531.1| hypothetical protein SmuNN2025_1613 [Streptococcus mutans NN2025] gi|254998038|dbj|BAH88639.1| conserved hypothetical protein [Streptococcus mutans NN2025] Length = 271 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 92/216 (42%), Gaps = 30/216 (13%) Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTH 422 L T ++ + PL Q S M+ +QP++ L+ K+ + + + +LYK + Sbjct: 60 LFTFLIRTILLPLFNLQLKSGQKMQELQPELKALQTKYPGKDRESRMRMAEESQELYKKY 119 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP A +P+L+Q+PV +A+Y+ ++ ++ F D+ DP I Sbjct: 120 GVNPYASLFPLLIQMPVLWALYQALTRVEFLKTGSFLWM--DIGDKDPYFIL-------- 169 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW---MPVVFVFALSSFPAGLI 539 P++ ++ F+ ++ A + M++ +P+ + + +G+ Sbjct: 170 -----------PVLAAIFTFLSSWLTNKAAKERNGMMITMNIILPIFILLIGFNLASGVA 218 Query: 540 IYWSWSNVISIVQQAVIM---KMHGAEIGLIDRLRS 572 +YW SN + Q ++ K+ L D R Sbjct: 219 LYWVVSNAYQVFQILLLNNPFKIIAERQRLEDEARE 254 >gi|38234912|ref|NP_940679.1| putative inner membrane protein translocase component YidC [Corynebacterium diphtheriae NCTC 13129] gi|38201177|emb|CAE50901.1| Putative integral membrane protein [Corynebacterium diphtheriae] Length = 317 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 108/279 (38%), Gaps = 62/279 (22%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ +V ++ +AI+L T ++ L Q S M Sbjct: 2 LNFIYWPISAILWFWHKVVSFVLDPGSGLSWVLAIVLLTFTIRALLVKPMLNQMRSMRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP + E+R+K+ Q L + +L K +NP+AGC P+L+Q+PVF ++ V+ Sbjct: 62 QELQPLMQEIRKKYPND-QQKLMEETRKLQKEMGVNPVAGCLPVLVQMPVFIGLFHVLRS 120 Query: 450 S---------------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 + A + D+ + +F + +P M+ P Sbjct: 121 FNRTGTGTGQLGLSPEVNRETANYIFSAADVQSFLDARLFGVPLSAFISMPKEMYQAFQP 180 Query: 495 I----------------IMSLSMFIQMKMS-------------PPPADKGQAMI------ 519 + I+ L+ ++S PPA+ M Sbjct: 181 VDFTRTDIALVAAPLIVIIVLATHFNARLSVDRQKARRESGLQKPPANDQMQMQMDMMNR 240 Query: 520 --LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 L +MP+ +F + GL+ Y +N+ + QQ I Sbjct: 241 MMLWFMPLTILFTGVLWHLGLLFYMVSNNIWTFFQQRWI 279 >gi|24378835|ref|NP_720790.1| hypothetical protein SMU.337 [Streptococcus mutans UA159] gi|38503009|sp|Q8DVX3|OXAA1_STRMU RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|24376711|gb|AAN58096.1|AE014881_10 conserved hypothetical protein; putative membrane protein [Streptococcus mutans UA159] Length = 271 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 92/216 (42%), Gaps = 30/216 (13%) Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTH 422 L T ++ + PL Q S M+ +QP++ L+ K+ + + + +LYK + Sbjct: 60 LFTFLIRTILLPLFNLQLKSGQKMQELQPELKALQTKYPGKDRESRMRMAEESQELYKKY 119 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP A +P+L+Q+PV +A+Y+ ++ ++ F D+ DP I Sbjct: 120 GVNPYASLFPLLIQMPVLWALYQALTRVEFLKTGSFLWM--DIGNKDPYFIL-------- 169 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW---MPVVFVFALSSFPAGLI 539 P++ ++ F+ ++ A + M++ +P+ + + +G+ Sbjct: 170 -----------PVLAAIFTFLSSWLTNKAAKERNGMMITMNIILPIFILLIGFNLASGVA 218 Query: 540 IYWSWSNVISIVQQAVIM---KMHGAEIGLIDRLRS 572 +YW SN + Q ++ K+ L D R Sbjct: 219 LYWVVSNAYQVFQILLLNNPFKIIAERQRLEDEARE 254 >gi|255537783|ref|XP_002509958.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis] gi|223549857|gb|EEF51345.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis] Length = 421 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 96/230 (41%), Gaps = 23/230 (10%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + ++ +NL G N+ +I+LTT+ ++ + PL Q +T+ + ++P+++E++++ Sbjct: 142 LQHVIDAVHNLTGFNWWASIVLTTLIIRTMMVPLMINQLKATSKLTLMRPRLEEIKQQMD 201 Query: 405 Q---SPPQVL--QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 P + K M L+K + +P I +Q PVF + I E + Sbjct: 202 NTAMDPAAIAEGNKRMKMLFKEYGASPFTPMKGIFVQGPVFVCFFLAIRNMAEKVPSFKN 261 Query: 460 G---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 G W DL+ D IF + L F++ ++ + +Q + P Sbjct: 262 GGAFWFVDLSTPDSLYIFPVLTALTFWI-------------TVELNMQEGLEGNPVAGTM 308 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 I + V FP + YW +N+ S V+ K+ G + L Sbjct: 309 KNISRVFAALTVPLTMGFPKAIFCYWVTTNLFSFAYGGVL-KLPGVKQFL 357 >gi|319440491|ref|ZP_07989647.1| putative inner membrane protein translocase component YidC [Corynebacterium variabile DSM 44702] Length = 424 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 107/293 (36%), Gaps = 71/293 (24%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ G + ++I+ V ++LL KQ S M Sbjct: 2 LNFIYYPISWVLWFWHKAWGLILDPDSGITWALSIIFLVVTLRLLLLRPMIKQLRSGRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ E++ K+ + Q M +L K +NPLA C P+L+QIP+F ++ V+ Sbjct: 62 QEMQPRMQEIKRKYAKDQQQ-QALEMRKLQKEMGVNPLASCLPMLVQIPIFIGLFHVLRS 120 Query: 450 SL--------------EMRHAPFWGWIKD--------------LAAA-----DPTNIFTL 476 E R+ +G+ D L++ D FT Sbjct: 121 FNRTGTGTGQLGMSIEETRNTANYGFGIDEVQSFLDARLFGAPLSSYISMPTDSFGAFTD 180 Query: 477 FGILPFYLP--GFMHVGIWPIIMSLSMFI--------------------------QMKMS 508 G + F F+ + + + + F Q M Sbjct: 181 DGSVDFTRANIAFVVIPMMLVAAVIMHFNAKHSLVRQARRKAEQAKSKKKGATTPQQDMM 240 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 Q +++ MPV+ + + GL +Y + + VQQ ++ + Sbjct: 241 ENQMAMMQKLMVWVMPVLSLVGAYFWHVGLAVYMLTNTSWTFVQQVLVYRKMD 293 >gi|322387091|ref|ZP_08060702.1| SpoIIIJ family protein [Streptococcus infantis ATCC 700779] gi|321142078|gb|EFX37572.1| SpoIIIJ family protein [Streptococcus infantis ATCC 700779] Length = 308 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 105/251 (41%), Gaps = 31/251 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNIQ 393 + F+ PM + YF G FG+AI++ T+ V+L+ PL Q + M ++ Sbjct: 38 WDFLGAPMGEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMNALK 97 Query: 394 PKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 ++ + + K++ Q Q+A+ K H I+ G C+P+L+Q+P F AIY Sbjct: 98 HVLEPHQTRLKEAETQEEKLEAQQALFAAQKEHGISMFGGVGCFPLLIQMPFFSAIYFAA 157 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + + A F G +A P+ I F + +Y+ + + + Sbjct: 158 QHTEGVSEASFLG----IALGSPSWILIAFAGILYYVQSLLSLHG--------------V 199 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 + ++ P++ V PA + +YW + I+QQ ++ + L Sbjct: 200 EDETQREQLKKMIYMSPMMIVMFSIFSPASVTLYWVVGGFMMILQQFIVN--YIIRPKLR 257 Query: 568 DRLRSTFSKNY 578 ++R +KN Sbjct: 258 KKVREELAKNP 268 >gi|145296949|ref|YP_001139770.1| putative inner membrane protein translocase component YidC [Corynebacterium glutamicum R] gi|140846869|dbj|BAF55868.1| hypothetical protein [Corynebacterium glutamicum R] Length = 422 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 103/283 (36%), Gaps = 50/283 (17%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + P+ +M ++ L+ N + ++ + ++ + P + Y S Sbjct: 2 LDILIYPVSGVMKLWHLLLHNVAGLDDSLAWFFSLFGLVITIRAIIAPFTWQMYKSGRTA 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYK 445 +I+P LRE++K + + + + L K + INPLAGC P L+QIP+ +Y Sbjct: 62 AHIRPHRAALREEYKGKYDEASIRELQKRQNDLNKEYGINPLAGCVPGLIQIPIVLGLYW 121 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFG--------------------------- 478 + + + P + + Sbjct: 122 ALLRMARPEGGLENPVFQSIGFLTPEEVESFLAGRVSNVPLPAYVSMPTEQLEYLSTTQA 181 Query: 479 -ILPFYLPGFMHVGIW-PIIMSLSMF--IQMKMSPPPADKGQAMILNWMPVVFVFALSS- 533 +L F LP F+ I I M++SM+ Q G + M ++ S Sbjct: 182 EVLNFVLPLFITAAILTAINMAMSMYRSFQTNDYASGFSNGMLKFMIVMSILAPIFPLSL 241 Query: 534 -----FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 FP + +YW +N+ +++Q ++M + + L D + Sbjct: 242 GLTGPFPTAIALYWVSNNLWTLLQTIIMMVILERKYPLTDDFK 284 >gi|227834359|ref|YP_002836066.1| preprotein translocase YidC subunit [Corynebacterium aurimucosum ATCC 700975] gi|262183091|ref|ZP_06042512.1| putative inner membrane protein translocase component YidC [Corynebacterium aurimucosum ATCC 700975] gi|227455375|gb|ACP34128.1| preprotein translocase YidC subunit [Corynebacterium aurimucosum ATCC 700975] Length = 329 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 102/286 (35%), Gaps = 68/286 (23%) Query: 339 FYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ L+ G + IAI+L T +K + Q S+ M Sbjct: 2 LNFIYWPISAVLWFWHWLLSFVLDSAWGGTWIIAIVLLTWTLKAIMVKPTITQLRSSRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + IQP+I ELR K+ + Q M ++YK + P+AGC P+ QIP+F ++ V+ Sbjct: 62 QEIQPQIQELRTKYANDQTKAAQ-EMQRIYKESGVRPVAGCLPMFAQIPMFIGLFHVLRS 120 Query: 450 S---------------------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 + A + + + IF + + L + Sbjct: 121 FDRTVAVAGGIGHPAGEAMSEEMNASIANYIFEPELVKQFVDAKIFGVPLVANLRLNSGL 180 Query: 489 HVGIWPIIMSLSMFIQ---------------MKMSPPPADKGQAMI-------------- 519 + M ++ I M ++ A + Sbjct: 181 EIVKETTTMQAAVIIVPLIAIIAVLTHFNARMTLNRQEARRAAGKTATPQGQNAEMMQQQ 240 Query: 520 --------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 L +MP + VF+ +P GL+ Y + V + Q ++ Sbjct: 241 MAMMNKMMLWFMPAMLVFSGFIWPIGLLFYMLANTVWTFFQTRIVY 286 >gi|15241690|ref|NP_201011.1| OXA1; P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] gi|38372434|sp|Q42191|OXA1_ARATH RecName: Full=Mitochondrial inner membrane protein OXA1; AltName: Full=Oxidase assembly 1 protein; Short=AtOXA1; Flags: Precursor gi|2462077|emb|CAA72619.1| Oxa1 protein [Arabidopsis thaliana] gi|6624207|dbj|BAA88473.1| AtOXA1 [Arabidopsis thaliana] gi|10176922|dbj|BAB10166.1| Oxa1 protein [Arabidopsis thaliana] gi|21618094|gb|AAM67144.1| AtOXA1 [Arabidopsis thaliana] gi|22655115|gb|AAM98148.1| AtOXA1 [Arabidopsis thaliana] gi|30387505|gb|AAP31918.1| At5g62050 [Arabidopsis thaliana] gi|332010172|gb|AED97555.1| mitochondrial inner membrane protein OXA1 [Arabidopsis thaliana] Length = 429 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 88/234 (37%), Gaps = 22/234 (9%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +F + + + G + +I++ T+ ++ PL KQ T + ++P+++ Sbjct: 131 FFPIAALQQCIDMVHTFTGFEWWASIVVATILIRSSTVPLLIKQMKDTTKLALMRPRLES 190 Query: 399 LREKFKQS-----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +RE+ + QK M L+K + + P + +Q P+F + I E Sbjct: 191 IREEMQNKGMDSVTMAEGQKKMKNLFKEYGVTPFTPMKGMFIQGPLFICFFLAIRNMAEK 250 Query: 454 RHAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + G W DL D I + L F ++++ Q M Sbjct: 251 VPSFQTGGALWFTDLTTPDSLYILPVITGLTF-------------LITVECNAQEGMEGN 297 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P + ++ V SFP + YW SN+ S++ VI + ++ Sbjct: 298 PMAGTVKTVCRVFALLTVPMTMSFPQAIFCYWITSNLFSLMYGLVIKRPQVKKM 351 >gi|229816221|ref|ZP_04446531.1| hypothetical protein COLINT_03271 [Collinsella intestinalis DSM 13280] gi|229808229|gb|EEP44021.1| hypothetical protein COLINT_03271 [Collinsella intestinalis DSM 13280] Length = 279 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 105/239 (43%), Gaps = 10/239 (4%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + +I + +F + G++G++I++ V ++LL P+ K STA M+ +QPK+ E Sbjct: 22 WDWIVQILFQALELIQRFAGDWGLSIIILVVIIRLLLTPMMLKSIKSTARMQVLQPKLLE 81 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-----ISLEM 453 ++E++ P Q + + + Y + NP GC P+L+Q+P+ A++ ++ Sbjct: 82 IQERYAADP-QRQAEELQKFYSENKFNPFGGCLPLLIQMPILVALFNLLRDLGHYFPDAA 140 Query: 454 RHAPFWGWIKDLAAADPTNIFT-LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + I P F FG YL + G ++ + + Sbjct: 141 EKGFSFFNILPNLVTSPAQAFADGFGAALPYLIALILFG---VLTFIPQMYMTRNQTGAQ 197 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 + M++ M V+ + PAG+++Y+ S+ +VQQ + + + + R Sbjct: 198 VQSTKMMMVVMTVMMLVMGWGMPAGVLLYYDVSSAWQVVQQIFVTQKVIDKAKAEEEAR 256 >gi|223983638|ref|ZP_03633816.1| hypothetical protein HOLDEFILI_01097 [Holdemania filiformis DSM 12042] gi|223964405|gb|EEF68739.1| hypothetical protein HOLDEFILI_01097 [Holdemania filiformis DSM 12042] Length = 289 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 101/241 (41%), Gaps = 20/241 (8%) Query: 338 WF-YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 WF F P+ L+++ VG +++ + T+ V L+ K V T M+ IQP++ Sbjct: 53 WFNAFFVFPLAKLVNFLTPYVG-VALSVSIVTLLVHLITLVFTIKSTVMTQKMQVIQPEM 111 Query: 397 DELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 + + +K++ + Q + M +LYK + INP +Q+P+ A+Y + + Sbjct: 112 NRITKKYEGKTDERSQMAQAQEMQRLYKENGINPFGAIISSFIQLPIIMAVYMSVQRAES 171 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + + WG L+ + + G + + M L F+ + + A Sbjct: 172 VVNGTMWG----LSLKETPLHGVMSGQWLYLVLFVFMAICQIGSMMLPQFLATQKAKKEA 227 Query: 513 DKGQAM----------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ +M V + ++PA + IYW+ S+++ I + + ++ Sbjct: 228 AAHHKKYEKTKQPGGNMMIYMMVFILVISVNWPAAMTIYWAVSSLVMIFKTLFVQFIYID 287 Query: 563 E 563 + Sbjct: 288 K 288 >gi|213400713|gb|ACJ47005.1| hypothetical protein [Wolbachia endosymbiont of Armadillidium vulgare] Length = 171 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 66/172 (38%), Positives = 96/172 (55%), Gaps = 3/172 (1%) Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275 EG + +K L E Y DI K + S SW G +DKYW + I K + Sbjct: 1 HEGVLGAFNNK-LEEWTYKDISKKRLIKTSTSEKSWFGFADKYWFTAIITEKSDKINVSI 59 Query: 276 KYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 KY + + ++QA F ILPG S +T N+ FAGAK+ + Y+ L IP F+ + Sbjct: 60 KYTNVNNIDKFQADFVRPYKHILPGASASTLNYFFAGAKKLNLLDAYKDTLNIPLFDKAV 119 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 D+G YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + Y+S Sbjct: 120 DFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYISM 171 >gi|213026875|ref|ZP_03341322.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 195 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 63/209 (30%), Gaps = 28/209 (13%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S +I AW+ ++ +Q Q + A Sbjct: 1 MDSQRNLLVIALLFVSFMIWQAWE------------QDKNPQPQTQQTMQTTTTAAGSAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + +K L +IN +G + L Y ++ SN P L + + Sbjct: 49 DQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQF 106 Query: 119 AYFAELDYVSTANNIELPNS--------NTVWNLISGKILTPTTPIKLVFKNANNILFER 170 Y A+ N + L G+ + + + +A F + Sbjct: 107 IYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQ---NELQVPMTYTDAAGNTFTK 163 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSP 198 T Y + +V N + P Sbjct: 164 TFVFKRGDYAVNVNYSVQNTGEKPLESPP 192 >gi|302768040|ref|XP_002967440.1| hypothetical protein SELMODRAFT_408456 [Selaginella moellendorffii] gi|300165431|gb|EFJ32039.1| hypothetical protein SELMODRAFT_408456 [Selaginella moellendorffii] Length = 411 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 23/233 (9%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + ++ + + G + ++I LTTV V+ + PL Q STA ++P +++++ + Sbjct: 147 VQYVIYATHVVTGLPWWLSIALTTVAVRTMVLPLVIYQVKSTARFALLRPDLEKIKVDME 206 Query: 405 QSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 Q+ ++ M +L+ H +P LLQ P+F + + E + Sbjct: 207 QANYDPVALAENKRKMAELFAKHKTDPFTPLIGALLQGPIFMCFFFGLRTMAEKMDSFKE 266 Query: 460 G---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 G W DL D I F + ++ M P K Sbjct: 267 GGAFWFTDLTTPDELFILPFITTATFLITVELNAVD-------------GMQGQPNQKTM 313 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-MKMHGAEIGLID 568 IL M V+F+ + FP L YW SN+ S++Q A++ K A + + D Sbjct: 314 KNILRGMGVLFLPLTAQFPKALFCYWVTSNLWSMLQGALLRNKKFKAYLDIPD 366 >gi|89097506|ref|ZP_01170395.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911] gi|89087802|gb|EAR66914.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911] Length = 262 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 29/236 (12%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NM 389 D + ++ +P + L GNFG++I+L T+ ++L PL KQY M Sbjct: 33 DGFFNTYLVQPFASAIHMVAELFNGNFGLSIILITLIIRLALMPLMLKQYKRQQDMKGKM 92 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPL-AGCWPILLQIPVFFAIY 444 ++P++D+++ + K++ Q Q+ M LY+ H +NPL GC PIL+Q+P+ Y Sbjct: 93 DVLKPEMDKIQAQLKKTKDQKEQQKLQQEMFALYRKHGVNPLNMGCLPILIQMPILMGFY 152 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S E+ F P + I+ L + Sbjct: 153 YAIRSSHEIATHS-------------------FLWFNLGQPDLLITAAAGIVYYLQFKVT 193 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P + PV+ V S PA L +YW+ IVQ + +++ Sbjct: 194 QANMPVQQQNQMKFMGLLSPVMIVVFSFSAPAALPLYWTVGGTFLIVQTLIGRRLY 249 >gi|260834921|ref|XP_002612458.1| hypothetical protein BRAFLDRAFT_214259 [Branchiostoma floridae] gi|229297835|gb|EEN68467.1| hypothetical protein BRAFLDRAFT_214259 [Branchiostoma floridae] Length = 383 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 105/310 (33%), Gaps = 49/310 (15%) Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + + ++ T P +T F + + P Sbjct: 1 QAADTSSSPPDAVAPNITSEVPPAIATDAPLTEVTP--VPFETPTAHDIMQAAAETGVDP 58 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 L GW + + F++ + + +I+ T+ + L FPL K + Sbjct: 59 SLTELGLGGWSPICL--LQSSIDMFHSTLHLPWWASIVCCTLLARSLMFPLIVKGQKNAI 116 Query: 388 NMKNIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 N+ N+ P+I ++ EK ++ + K H +NPL L+Q+PVF Sbjct: 117 NLNNVMPQIQKMNEKINEARTMGNKFEVAHQTAELQAFMKKHGVNPLKNFLVPLVQMPVF 176 Query: 441 F----AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 + ++ ++ + W DL A+DP I P++ Sbjct: 177 ISFFVGLRRMATLPIMSMATGGIFWFTDLTASDPYFIL-------------------PVM 217 Query: 497 MSLSMFIQMKMSP-----PPADKGQAMILNWMPVVFVFALSSFP---------AGLIIYW 542 S++M +++ P K ++ + ++ + +SFP + YW Sbjct: 218 TSITMLTIIELGSELGVENPQMKMMKNVMRVVSLMILPLTASFPTHSFPKVYCIAIFTYW 277 Query: 543 SWSNVISIVQ 552 SN +I Q Sbjct: 278 MTSNTFTIAQ 287 >gi|115252808|emb|CAK98244.1| conserved hypothetical transmembrane protein [Spiroplasma citri] Length = 426 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 9/228 (3%) Query: 336 WGWFYF-IAKPMFMLMSYFYNLVGNFGI--AIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +G F F +A + L+ F L GI A+ LT++ V+L+ + K + M+ + Sbjct: 115 YGCFVFPVAWILVNLIYGFGGLDNGAGIIGALFLTSLIVRLITLMFSWKAQRNQDKMQLM 174 Query: 393 QPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 Q K E++ K+K S Q Q M+QLY+ ++PL+ L IP A+Y V+ Sbjct: 175 QIKQAEIQAKYKDSKDPAAKQKQQMEMMQLYRKEGVSPLSTIGSSFLSIPFLIAMYTVVR 234 Query: 449 ISLEMRHAPFWGWIKDLAAAD--PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + E++ A D + + +L YLP + I P I++L + Sbjct: 235 ATRELKMATIGQISLIEKPWDMITSGNYVYLALLFVYLPIQILSMILPTILNLRKTRVIT 294 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 A K Q ++ M VVF S +G+ IYW +S I I+Q Sbjct: 295 KEQKKARKRQFIMQGVMIVVFFVVTISIASGVAIYWIFSAFIQILQTL 342 >gi|297824719|ref|XP_002880242.1| hypothetical protein ARALYDRAFT_483801 [Arabidopsis lyrata subsp. lyrata] gi|297326081|gb|EFH56501.1| hypothetical protein ARALYDRAFT_483801 [Arabidopsis lyrata subsp. lyrata] Length = 434 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 22/227 (9%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 F + L+ ++ G N+ +I LTTV ++ + P+ Q +T + ++P+++EL Sbjct: 137 FPVAALQHLIDGVHSFTGLNWWASIALTTVLIRGVTIPILLNQLKATYKLNVLRPQLEEL 196 Query: 400 REKF--KQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 R++ K P+ + Q+ M L+K H + P +++Q P+F + + I E Sbjct: 197 RQEMSTKAQDPEAMAEGQRRMQLLFKEHGVTPFTPLKGLIIQGPIFISFFFAIRNMAEKV 256 Query: 455 HAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 + G W DL AD T I L + F +IM S +Q + P Sbjct: 257 PSFKTGGTLWFTDLTTADTTYILPLLTAVTF------------LIMVESN-MQEGLEGNP 303 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + + + L L YW SN+ ++V + + Sbjct: 304 VAGTMKKFSRIIAFLSIPVLIGIEKALFCYWLTSNLFTLVYGLTLRR 350 >gi|307110546|gb|EFN58782.1| hypothetical protein CHLNCDRAFT_140542 [Chlorella variabilis] Length = 426 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 96/230 (41%), Gaps = 23/230 (10%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + L++ + +G + +IM+ T ++L P+ Q +T M +P+++ Sbjct: 157 WLPTRLIQGLLTGLHGALGLEWWQSIMVATCAMRLATLPIMIMQIKNTYRMSLARPEMEV 216 Query: 399 LREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--- 448 L K+ + Q+ ++ ++K +N NP +L+Q P+F + + Sbjct: 217 LMNHVKEEQAKGNMEAALEHQQHVMAVWKKYNCNPFKSMAGMLVQAPIFIGFFSALRGFA 276 Query: 449 -ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + W DL ADPT + L F L + M+ Sbjct: 277 AHKVPSLTEGGALWFTDLTVADPTYMLPALAGLSFLLTIELGAADG-----------MQG 325 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 PP K ++ + +V A ++ PA + +YWS SNV S++Q +++ Sbjct: 326 QPPEMQKKLKNVMRVVALVIPLASTALPASVFMYWSASNVFSLLQTSLLK 375 >gi|296111276|ref|YP_003621658.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154] gi|295832808|gb|ADG40689.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154] Length = 306 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 106/254 (41%), Gaps = 35/254 (13%) Query: 341 FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVS----TANMKNIQ 393 +I P+ +M+ +G G AI++ TV ++L+ P Q ++ M+ ++ Sbjct: 33 WIGHPLADIMASIAQFIGGVNGIGWAIIIITVILRLVLLPFFLNQQINTTINQIKMQTLK 92 Query: 394 PKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 P+ID+L+ +++ Q AM+ LY+ ++++ + G + +Q+P+F +Y I Sbjct: 93 PEIDKLQALTRKAGTTQEQQQASMAMMSLYRENDVSVIGGISFLTMAMQLPIFSGLYSAI 152 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ A F G+ DL P IF + + + + ++ M+ Sbjct: 153 LHAPALQGATFLGF--DLGK--PQIIFAVAAGIVYLIQAWLA---------------MQH 193 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P K A ++ PV+ + +Y+ + +++Q + H GL Sbjct: 194 MPEEQKKTSAAMIFISPVMIFVFAMIASGAIGLYFVIGGLFALLQTLI---QHFQRPGLE 250 Query: 568 DRLRSTFSKNYNSQ 581 R+ F + Sbjct: 251 KRVAREFKIKKTAD 264 >gi|315611871|ref|ZP_07886790.1| SpoIIIJ family protein [Streptococcus sanguinis ATCC 49296] gi|315316049|gb|EFU64082.1| SpoIIIJ family protein [Streptococcus sanguinis ATCC 49296] Length = 312 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 33/252 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNIQ 393 + F+ PM + YF G FG+AI++ T+ V+L+ PL Q + M ++ Sbjct: 41 WDFLGAPMGEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMNALK 100 Query: 394 PKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKVI 447 ++ + + K++ Q Q+A+ K H I+ L G C+PIL+Q+P F AIY Sbjct: 101 HVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMLGGVGCFPILIQMPFFSAIYFAA 160 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + + A + G +P P + V ++ L + + Sbjct: 161 QHTDGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLSLHG 201 Query: 508 SPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + Q ++ P++ VF PA + +YW + I+QQ ++ + L Sbjct: 202 VEDEMQREQLKKMIYMSPLMIVFFSFFAPASVTLYWVVGGFMMILQQFIVN--YVVRPKL 259 Query: 567 IDRLRSTFSKNY 578 ++R F+KN Sbjct: 260 RKKVREEFAKNP 271 >gi|77409832|ref|ZP_00786473.1| SpoIIIJ family protein [Streptococcus agalactiae COH1] gi|77171560|gb|EAO74788.1| SpoIIIJ family protein [Streptococcus agalactiae COH1] Length = 195 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 82/181 (45%), Gaps = 27/181 (14%) Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 S+ M+ IQP++ EL++K+ P L M +YK +NP A P+L+Q+PV Sbjct: 1 MKSSQKMQEIQPRLKELQKKYPGKDPDSRLKLNDEMQSMYKAEGVNPYASVLPLLIQLPV 60 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +A+++ ++ ++ F +L+ DP I P++ +L Sbjct: 61 LWALFQALTRVXFLKVGTFLSL--ELSQPDPYYIL-------------------PVLAAL 99 Query: 500 SMFIQMKMSPPPADKGQ---AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 F+ ++ A + ++ MP + + +F +G+++YW+ SN + Q ++ Sbjct: 100 FTFLSTWLTNKAAVEKNIALTLMTYVMPFIILVTSFNFASGVVLYWTVSNAFQVFQILLL 159 Query: 557 M 557 Sbjct: 160 N 160 >gi|300120462|emb|CBK20016.2| Oxa1 [Blastocystis hominis] Length = 441 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 37/244 (15%) Query: 331 EMLIDWGWFYF-IAKPMFM---LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 + + +G F I P L+++ ++ + AI T+ ++L+ PL K Sbjct: 116 DAALKYGLFGVTIGTPTTWVVSLLTWVNSMGIPWWGAIAGVTLGLRLVLLPLTIKSTRQR 175 Query: 387 ANMKNIQPKIDELREKFK-------QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 A + IQP++++L E+ + + Q ++ M+ LYK ++P + + +QIPV Sbjct: 176 AKLAEIQPELNKLLERARLSQSMGMAADAQGMRDEMLSLYKNAGVSPFSPLFGAFIQIPV 235 Query: 440 FFAIYKVISISLEMRHAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 + + + E A G W +LAAADP + P++ Sbjct: 236 VISCFMGVRKLCETVPAVTTGGLSWFTNLAAADPYFVL-------------------PVV 276 Query: 497 MSLSMFIQMKM----SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 LS ++ G ++ M + VF + PAGL YW+ +++++ Q Sbjct: 277 TGLSTLFMTELGADGMNGNGQVGMKYMMRGMSLFMVFIAAKLPAGLCFYWTVNSILACCQ 336 Query: 553 QAVI 556 I Sbjct: 337 TLAI 340 >gi|85057752|ref|YP_456668.1| 60 kDa inner membrane protein [Aster yellows witches'-broom phytoplasma AYWB] gi|84789857|gb|ABC65589.1| 60 kDa inner membrane protein [Aster yellows witches'-broom phytoplasma AYWB] Length = 513 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 113/258 (43%), Gaps = 33/258 (12%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 +G+F+ + + + +F + GN G+ I+L TVF++ L +P+ K Sbjct: 250 FGYFWNILIISIGSFLYFFSTFLVYGASGMFFGNLGLGIVLATVFIRTLTWPIYTKTSTL 309 Query: 386 TANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 + NM IQ +I+++++K+ Q +Q ++++Y+ +N + G LQ+P+F Sbjct: 310 SMNMSLIQSEIEKVKQKYAIKKDLASAQKMQLEILKVYRKNNFS-FWGFLLSFLQLPLFI 368 Query: 442 AIYKVISISLEMRH--------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV--- 490 AI + +S + + + +L ++P N F +F +L F + M + Sbjct: 369 AINQTLSRFIIPGGIFATDKLIEKPFLGLINLKPSNPNNAFVIF-LLSFLVGATMFILNK 427 Query: 491 -----GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + S + + K ++K ++ +M ++ VF S P L +YW Sbjct: 428 ISFKKPDYLKTPSYHLTSEQKQKAKQSEKSIKIMSVFMILMMVFFSRSNPI-LSLYWIVG 486 Query: 546 NVISIVQQAVIMKMHGAE 563 N +I Q + K + Sbjct: 487 NTYTIFQTLLTRKKIQKK 504 >gi|237786652|ref|YP_002907357.1| putative inner membrane protein translocase component YidC [Corynebacterium kroppenstedtii DSM 44385] gi|237759564|gb|ACR18814.1| preprotein translocase subunit [Corynebacterium kroppenstedtii DSM 44385] Length = 324 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 96/287 (33%), Gaps = 65/287 (22%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ +M +Y G + ++I+ +++ F Q S M Sbjct: 2 LNFIYYPVSWVMLAWYKFFGLFLNPDSGVTWALSIIFLVFTIRIFLFKPMANQMRSGRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ E+R K+K Q M +L K +NPLA C P L+Q+P+F ++Y V+ Sbjct: 62 QELQPKMQEIRAKYKND-QQTQAIEMRKLQKEMGVNPLASCLPALVQMPIFISLYHVLRS 120 Query: 450 SL--------------EMRHAPFWGW-------------------------------IKD 464 + R+ P +G+ Sbjct: 121 FNRTGTGHGELGMTVEQTRNTPNYGFGATEVQSFLDARLFGAPLSAYIRMPEKAFDAFSA 180 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--------- 515 + D T L +P + + M + P + Sbjct: 181 SGSVDFTRTNILAVAIPLMIISALATHFNARNMVRRNKARQAADPKKNAQNPQMAMQANM 240 Query: 516 -QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 M+L P + + + GL+ Y +NV ++ QQ V+ Sbjct: 241 MNNMMLWLFPAMILITGMFWQIGLLTYMLANNVWTLGQQIVLFNKMD 287 >gi|297797165|ref|XP_002866467.1| hypothetical protein ARALYDRAFT_496379 [Arabidopsis lyrata subsp. lyrata] gi|297312302|gb|EFH42726.1| hypothetical protein ARALYDRAFT_496379 [Arabidopsis lyrata subsp. lyrata] Length = 429 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 89/234 (38%), Gaps = 22/234 (9%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +F + + ++ G + +I++ T+ ++ PL KQ T + ++P+++ Sbjct: 131 FFPIAALQHCIDMVHSFTGFGWWASIVVATILIRSSTVPLLIKQMKDTTKLALMRPRLES 190 Query: 399 LREKFKQS-----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +RE+ + QK M L+K + + P + +Q P+F + I E Sbjct: 191 IREEMQNKGMDSVTMAEGQKKMKNLFKEYGVTPFTPMKGMFIQGPLFICFFLAIRNMAEK 250 Query: 454 RHAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + G W DL D I + L F ++++ Q M Sbjct: 251 VPSFQTGGALWFTDLTTPDSLYILPVITGLTF-------------LITVECNAQEGMEGN 297 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P + ++ V SFP + YW SN+ S++ VI + ++ Sbjct: 298 PMAGTVKNVCRGFALLTVPMTMSFPQAIFCYWITSNLFSLMYGLVIKRPQVKKM 351 >gi|299822979|ref|ZP_07054865.1| ParB/SpoJ family partitioning protein [Listeria grayi DSM 20601] gi|299816508|gb|EFI83746.1| ParB/SpoJ family partitioning protein [Listeria grayi DSM 20601] Length = 274 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 29/239 (12%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 D + ++ KP ++ +F + G++GIAI++TT+ ++ + PL K Q M Sbjct: 31 DGFFNVYLIKPFASVIKFFASFFDGSYGIAIIITTIIIRAIIMPLNLRTAKAQMGMQTKM 90 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIY 444 +P+ID+++ + K++ + +Q+ M +Y+ ++INPL GC P+++Q+P+ A Y Sbjct: 91 AAAKPEIDDIQARVKRAATKEEQVKIQQEMTLVYQKYDINPLQMGCLPLIIQMPILMAFY 150 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S E+ F P + + L + L F+ Sbjct: 151 YAIRGSQEIATHTFLW----FNLGHPDMVLAILAGLVYL---------------LQYFVS 191 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M + P K ++ P + +F S P+ L +YW+ + Q + K++ + Sbjct: 192 MIGNTPEQKKQMRVMGLISPAMILFISFSAPSALALYWAVGGLFLAGQTLLTKKLYMNK 250 >gi|86606439|ref|YP_475202.1| inner membrane protein translocase component YidC [Synechococcus sp. JA-3-3Ab] gi|86554981|gb|ABC99939.1| inner membrane protein OxaA [Synechococcus sp. JA-3-3Ab] Length = 392 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 5/119 (4%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + MK I Sbjct: 1 MDFGVGFLSNNVMLPILDFFYGIVPSYGLAIIFLTLVIRFALYPLNVGSIRNMRRMKVIN 60 Query: 394 PKID----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E++EK++ P Q L++A +LY +NPL GC P+L+Q+PV FA++ + Sbjct: 61 PLMQRRMREIQEKYRDDP-QKLREAQAKLYSELGVNPLGGCLPLLIQMPVLFALFATLR 118 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 41/109 (37%), Gaps = 8/109 (7%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVF--VFA 530 G + ++ +S+++ ++ D Q+ + PV+F +F Sbjct: 256 LGRVGAFDPDGTIHWDIIGMIVLFGVSIYLNQSLTNAGQEDPSQSSMARITPVLFSAMFL 315 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 PAG+++Y SN+ VQ ++ + L + L+ + Sbjct: 316 FFPLPAGVLLYILVSNIFQTVQTFLLSR-----EPLPENLQQLVEEERR 359 >gi|332296958|ref|YP_004438880.1| 60 kDa inner membrane insertion protein [Treponema brennaborense DSM 12168] gi|332180061|gb|AEE15749.1| 60 kDa inner membrane insertion protein [Treponema brennaborense DSM 12168] Length = 901 Score = 127 bits (320), Expect = 5e-27, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 20/225 (8%) Query: 339 FYFIAKPMFMLMSY----FYNLVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMK 390 + I P+ ++ + F + N GI+++ + V +L PL Q V K Sbjct: 6 YTVIIYPLIQIIEFAFMLFNGVFKNAGISVIGVSFAVSILCLPLYIVAEHWQQVQRDIEK 65 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P I ++ FK ++ + H I L + +L+QIP F A Y +S Sbjct: 66 RLDPGISRIKAVFKGDEQYMILSTFYKQNHYHPIMALRSSFGLLIQIPFFIAAYSFLSKL 125 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + + +IKD+ A D + G + + PI M++ + + Sbjct: 126 PVLA-GKNFLFIKDMGAPD-----------ALFSIGTFPINVLPIAMTVINIVAGAIYTK 173 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + + M +VF+ L + P+GL++YW+ +N+ S+V+ Sbjct: 174 GFKAKDKIQIYGMALVFLVILYNSPSGLVLYWTMNNIFSLVKNIF 218 >gi|19554287|ref|NP_602289.1| putative inner membrane protein translocase component YidC [Corynebacterium glutamicum ATCC 13032] gi|62391944|ref|YP_227346.1| inner membrane protein translocase component YidC [Corynebacterium glutamicum ATCC 13032] gi|145297091|ref|YP_001139912.1| putative inner membrane protein translocase component YidC [Corynebacterium glutamicum R] gi|21325870|dbj|BAC00491.1| Preprotein translocase subunit YidC [Corynebacterium glutamicum ATCC 13032] gi|41223091|emb|CAF19036.1| Preprotein translocase subunit YidC [Corynebacterium glutamicum ATCC 13032] gi|140847011|dbj|BAF56010.1| hypothetical protein [Corynebacterium glutamicum R] Length = 317 Score = 127 bits (318), Expect = 7e-27, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 101/279 (36%), Gaps = 62/279 (22%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ + ++IM T V+++ S M Sbjct: 2 LNFIYWPISAILWFWHKAFSFVLSPDSGITWALSIMFLTFTVRMVLVKPMVNTMRSQRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +++ PK+ +REK+K Q + + +L K +NP+AGC P+L+QIPVF ++ V+ Sbjct: 62 QDMAPKMQAIREKYKND-QQKMMEETRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLRS 120 Query: 450 SL-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF--------------------- 487 + A P IF + + F Sbjct: 121 FNRTGSGVGQLEMTVEQNANTPNYIFGVDEVQSFLRADLFGAPLSSYITMPADAFDAFLG 180 Query: 488 ---------MHVGIWPIIMSLSMFIQMKMS------PPPADKGQAM-------------- 518 + +I+ ++ + ++S A K QA Sbjct: 181 LDVSRLNIALVAAPMILIIVVATHMNARLSVNRQEARKAAGKQQAASSDQMAMQMQMMNK 240 Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +L +MP +F + GL++Y +NV + QQ I Sbjct: 241 MMLWFMPATILFTGFIWTIGLLVYMMSNNVWTFFQQRYI 279 >gi|224477730|ref|YP_002635336.1| putative lipoprotein [Staphylococcus carnosus subsp. carnosus TM300] gi|222422337|emb|CAL29151.1| putative lipoprotein precursor [Staphylococcus carnosus subsp. carnosus TM300] Length = 287 Score = 126 bits (317), Expect = 8e-27, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 119/256 (46%), Gaps = 34/256 (13%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI-- 392 G+FY AKPM L+ + NL ++G+AI++ + ++L+ P Q + M+ + Sbjct: 29 GFFYNTFAKPMDHLLHWLGNNLGHDYGLAIIIIVLAIRLVMLPFMLSQTKNGQMMRKVMD 88 Query: 393 --QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAI 443 +P+++ ++EK K++ Q + M+++YK + +NP+ GC PIL+Q+P+ F + Sbjct: 89 FAKPEMNAVQEKVKRARTQEEKMAANQEMMEVYKKYELNPMKSMLGCLPILIQMPILFGL 148 Query: 444 YKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y + + P + W DL D I + G+L F L Sbjct: 149 YVSLKWPSHGGITAHPNFLWF-DLTKPD-ILITIIAGVLYF----------------LQS 190 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + ++ P + M++ P+ ++ + + L +YWS S + IVQ V + + Sbjct: 191 LVSLENMPKEQRQMGYMMMIISPIFIIYISYTSASALGLYWSVSAIFMIVQTFVANRYYA 250 Query: 562 AEIGL-IDRLRSTFSK 576 + RL++ +K Sbjct: 251 KYADQEVARLKAKMNK 266 >gi|307185547|gb|EFN71509.1| Mitochondrial inner membrane protein OXA1L [Camponotus floridanus] Length = 413 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 106/253 (41%), Gaps = 36/253 (14%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + + + + + + I++ T+ V++L FP+ K + N N P I EL+ K Sbjct: 120 IQKFLEFMHISCDIPWWTTIVIGTICVRVLIFPIVIKAQKNMINFSNCMPVITELQMKMT 179 Query: 405 QSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ + M+Q K ++++P+ L+Q PVF A+ + + +E Sbjct: 180 EARQNGDHFESARIANEMMQYMKKNDVSPVKNFIVPLIQAPVFLSFFLALRGMANTPVES 239 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + W+ DL DP I PI+ S++M+I +++ + Sbjct: 240 LKYGGFWWLHDLTVHDPYYI-------------------MPIVTSVTMYITIELGADGTN 280 Query: 514 -KGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-IGLID 568 K M + P + + + FP ++ YW +N +S+VQ ++ + + + + Sbjct: 281 LKSMGMFRYVLRAVPFIILPFMIHFPGAILTYWVSTNFVSLVQTGILKVPYVRKTLDMPT 340 Query: 569 RLRSTFSKNYNSQ 581 R++ + + + Sbjct: 341 RIKHKSAADGKKK 353 >gi|282865068|ref|ZP_06274121.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE] gi|282559991|gb|EFB65540.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE] Length = 263 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 34/245 (13%) Query: 346 MFMLMSYFYNLVGNFG-------------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 M MS F +LVG+ AI+L T V+L PL++ + Sbjct: 1 MSAFMSAFASLVGSLADLLQPFFQTASTAAAIILFTALVRLAVHPLSRAAARGQKARTKL 60 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP+I LREK ++P + +QKA+++L+ ++P +GC P LLQ+P FF +Y + S Sbjct: 61 QPQIAALREKHAKNP-ERMQKALMELHAAEKVSPFSGCLPSLLQMPAFFLLYHLFSSG-S 118 Query: 453 MRHAPFWGWIKDLAAADPTNIF--TLFGILPFYLPGFMHVGIWPIIMSLSMF------IQ 504 + P DL A + L F G +++G++ ++ +++ F Q Sbjct: 119 IGGTPNSLLSHDLLGAPLGERWHDALAHGGLFGQAGLVYLGLFAVVAAVATFNYGRTKRQ 178 Query: 505 MKMSPPPAD--------KGQAMILNWMPVVFV---FALSSFPAGLIIYWSWSNVISIVQQ 553 M +P G + MP++ F+++ P +Y S + +++ Sbjct: 179 MAANPMTPAAGPDGQPVPGMGAMTKVMPLMSFLTLFSVAVVPLAAALYLVTSTTWTAIER 238 Query: 554 AVIMK 558 A + + Sbjct: 239 AYLYR 243 >gi|300934353|ref|ZP_07149609.1| putative inner membrane protein translocase component YidC [Corynebacterium resistens DSM 45100] Length = 324 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 103/285 (36%), Gaps = 68/285 (23%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ L + +AI+ +++ Q S+ M Sbjct: 2 LDFIYYPISGVLWFWHKLFSFVLDPSSGVTWALAIVFLVFTIRIFLIKPMANQLRSSRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + QPK+ EL+ K K + L M +L K +NPLA C P L+Q+P+F ++ V+ Sbjct: 62 QEFQPKMQELQRKHKND-RETLAIEMRKLQKEMGVNPLASCIPALIQMPIFIGLFHVLRS 120 Query: 450 S--------------LEMRHAPFWGWIKD-----------------LAAADPTNIFTLF- 477 E R+ P + + D + DP N Sbjct: 121 FNRTATSFGAPGMTVQETRNTPNYFFGVDEVQSFLDARLFGSPLSGYISMDPANYSAFSP 180 Query: 478 ---GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM---------------- 518 GI + + + + ++ M +MS + K QA Sbjct: 181 EGAGIDFSRMNIILIIVPLMLASAVMMHFTARMSIDRSKKRQAANPKKDADPRQQQMQMQ 240 Query: 519 -------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +L MP +++ + GL IY +N ++ QQ ++ Sbjct: 241 MDMMQRMMLWVMPALYLTGGFMWQVGLAIYMFVNNAWTVAQQKLL 285 >gi|161510304|ref|YP_001575963.1| hypothetical protein USA300HOU_2087 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|160369113|gb|ABX30084.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] Length = 251 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 113/249 (45%), Gaps = 35/249 (14%) Query: 346 MFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMKNIQPKIDEL 399 M ++ + N L N+G+AI++ + ++++ P Y ++ MK +P+++++ Sbjct: 1 MKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKVAKPEVEKI 60 Query: 400 REKFKQSPPQ----VLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIYKVISISL- 451 +EK K++ Q + ++Q+YK +++NP + GC P+L+Q+P+ +Y V+ L Sbjct: 61 QEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLYFVLKDQLV 120 Query: 452 -EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + P + W DL D I + G+L F + ++ K P Sbjct: 121 DGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF----------------IQAYVSSKTMPD 162 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMHGAEIGLID 568 + M++ P++ ++ S + L +YWS S +VQ I A+ + Sbjct: 163 EQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEKVAKKEVQP 222 Query: 569 RLRSTFSKN 577 + + ++ Sbjct: 223 FIEAYEREH 231 >gi|255324011|ref|ZP_05365136.1| preprotein translocase YidC subunit [Corynebacterium tuberculostearicum SK141] gi|255298868|gb|EET78160.1| preprotein translocase YidC subunit [Corynebacterium tuberculostearicum SK141] Length = 325 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 107/284 (37%), Gaps = 66/284 (23%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ L+ + +AI+L T +K L Q S+ M Sbjct: 2 LNFIYWPISAVLWFWHWLLSLVMDPAWGITWILAIVLLTWTLKALMVKPTISQIRSSRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS- 448 + IQPK+ E+R K+ + Q M ++YK + P+AGC P+ +QIP+F ++ V+ Sbjct: 62 QEIQPKVQEIRAKYGNDQTKAAQ-EMQKVYKESGVRPMAGCLPVFVQIPMFVGLFHVLRS 120 Query: 449 --ISLEMRHAPFWGWIKDLAAADPTN------------------IFTLFGILPFYLPGFM 488 ++ + ++ D N IF + + L + Sbjct: 121 FDRTVAVAGGIGHPSGDPMSIEDNANTANYIFKPDLVQQFLDAKIFDVPLVTNLRLNSPI 180 Query: 489 H-----------VGIWPIIMSLSMFIQMKMS-----------PPPADKGQAM-------- 518 + I+++ +MS A +GQ Sbjct: 181 VEGVTTSQAAVIIVPMIAIIAVMTHFNARMSLNRQEKRRAAGKTQAPQGQNAEMMQQQMA 240 Query: 519 -----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +L MP + VF+ S +P GL+ Y + V + Q ++ Sbjct: 241 MMSKMMLWVMPAMLVFSGSIWPIGLLFYMMANTVWTFFQTRIVY 284 >gi|313889769|ref|ZP_07823411.1| putative stage III sporulation protein J [Streptococcus pseudoporcinus SPIN 20026] gi|313121814|gb|EFR44911.1| putative stage III sporulation protein J [Streptococcus pseudoporcinus SPIN 20026] Length = 270 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 101/227 (44%), Gaps = 29/227 (12%) Query: 337 GW---FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW YF AK + L + G+ G+ I+L T+ ++LL PL Q S+ M+++Q Sbjct: 32 GWDQLVYFFAKSVQWL-----SFNGSIGLGIILFTLLIRLLLMPLFNIQIKSSQKMQDLQ 86 Query: 394 PKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ +++ K+ L LYK++ +NP A +P+++Q+P+ A+++ ++ Sbjct: 87 PELKKIQAKYPGKDSESRMALADETQALYKSNGVNPYASLFPLIIQMPIMIALFQALTRV 146 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 ++ +LA D I + L +L ++ ++ Sbjct: 147 PFLKTGT--FLWTELAQHDHLYILPILAALFTFLSSWL----------------TNLAAK 188 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ MP++ F +G+++YW SN + Q ++ Sbjct: 189 EKNMVMTVMTYMMPLMIFFMGFKLASGVVLYWVISNAFQVFQLLLLN 235 >gi|320010617|gb|ADW05467.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces flavogriseus ATCC 33331] Length = 256 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 32/244 (13%) Query: 346 MFMLMSYFYNLVG-------------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 M MS F +LVG + AI+L T V+L PL++ + Sbjct: 1 MSAFMSAFASLVGALADLLQPLFQHASTAAAIVLFTALVRLAVHPLSRAAARGQKARTKL 60 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP+I ELR+K ++P + +QKA+++L+ ++PL+GC P LLQ+P FF +Y + S Sbjct: 61 QPQIAELRKKHSKNPDR-MQKALMELHAKEKVSPLSGCLPSLLQMPAFFLLYHLFSSQRI 119 Query: 453 MRHAPFWGWIKDLAAA-DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF------IQM 505 + A L PF G +++G++ I+ +++ F QM Sbjct: 120 GGEPNSLLGHELFGAPLGERWHHALSEGGPFGPQGLVYLGLFVIVAAVATFNYGRTKRQM 179 Query: 506 KMSPPPAD--------KGQAMILNWMPVVFVFALSS---FPAGLIIYWSWSNVISIVQQA 554 +P G + MP++ L S P +Y S + +++A Sbjct: 180 AANPMTPATGPDGQPVPGMGAMTKVMPLMSFLTLVSVAYVPLAAALYIVTSTTWTALERA 239 Query: 555 VIMK 558 + + Sbjct: 240 YLYR 243 >gi|115450311|ref|NP_001048756.1| Os03g0116000 [Oryza sativa Japonica Group] gi|113547227|dbj|BAF10670.1| Os03g0116000 [Oryza sativa Japonica Group] Length = 440 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 96/243 (39%), Gaps = 43/243 (17%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ ++L G N+ I LT++ ++ L PL Q +T + ++P+I+ + + + Sbjct: 142 LQHLIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQMKATVKLNAMRPEIEAINLEMR 201 Query: 405 -----------------------QSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIP 438 + PQ + ++ + +L+ H + PL + +Q P Sbjct: 202 TISSTRIAGNEKSSTRVTDEGSMSTDPQSMLEGKRKLGELFLRHGVTPLTPLKGLFIQAP 261 Query: 439 VFFAIYKVISISLEMRHAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 +F + + IS +E + G W DL D I + L F Sbjct: 262 IFMSFFFAISNMVEKVPSFKGGGIYWFTDLTTPDELLILPMLTSLTF------------- 308 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++++ + +Q M P K M V+ + SFP + YW SN+ S+ V Sbjct: 309 LVTVELNMQDGMEGNPMLKTMKNFSRVMAVLTIPFTMSFPKAIFFYWVTSNLFSLGYGFV 368 Query: 556 IMK 558 + K Sbjct: 369 LRK 371 >gi|282851361|ref|ZP_06260726.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus gasseri 224-1] gi|282557329|gb|EFB62926.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus gasseri 224-1] Length = 271 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 111/250 (44%), Gaps = 34/250 (13%) Query: 336 WGW-FYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVST----A 387 + W F KP+ +M + +G G AI++ T V+L+ PL Sbjct: 40 YAWVFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 388 NMKNIQPKIDELREKFKQ---SPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPVF 440 + +QP++ ++E K+ + PQ +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKDNNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S E+ + F+G ++ + + T+ L + + G Sbjct: 160 IGIYQAVAYSKELAASSFFG----ISLGQRSIVLTIIATLLYVIQG-------------- 201 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ M P K M L P + F S P L +Y+ +I+I+QQ + + Sbjct: 202 -YLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQVITTFII 260 Query: 561 GAEIGLIDRL 570 ++ +L Sbjct: 261 MPKVKKTLQL 270 >gi|73662102|ref|YP_300883.1| preprotein translocase subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82593014|sp|Q49Z38|OXAA_STAS1 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|72494617|dbj|BAE17938.1| putative preprotein translocase subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 289 Score = 125 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 35/261 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVST----ANMK 390 G+FY PM ++ + N +G+AI++ + ++++ P Y ++ MK Sbjct: 30 GFFYNTFYVPMDNVIHWLGTSFNNDYGLAIVVLVLVIRIVLLPFMLSNYKNSHMMREKMK 89 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAI 443 +P ID ++EK K+S Q M+++YK +++NP+ GC PIL+Q+P+ + Sbjct: 90 VAKPDIDAIQEKVKRSRTQEEKMAANSEMMEVYKKYDMNPMKSMLGCLPILIQMPIIMGL 149 Query: 444 YKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 + V+ S P++ W +LA D I + GIL F L Sbjct: 150 FFVLKYPSSGGFTEHPYFLWF-NLAKPD-IWITIIAGILYF----------------LQA 191 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKM 559 ++ K P + M++ P++ V+ S + L +YWS S IVQ V + Sbjct: 192 YVSSKSMPAEQRQMGYMMMVISPIMIVWISFSSVSALGLYWSVSAAFLIVQTQVANMYYS 251 Query: 560 HGAEIGLIDRLRSTFSKNYNS 580 A+ + + + + Sbjct: 252 KLAQREVAPMIEAMEKNKAEA 272 >gi|307710735|ref|ZP_07647163.1| membrane protein oxaA 1 [Streptococcus mitis SK321] gi|307617341|gb|EFN96513.1| membrane protein oxaA 1 [Streptococcus mitis SK321] Length = 308 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 34/255 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ + I PM + YF N G FG+ I++ T+ V+L+ PL Q + M Sbjct: 35 GFIWNTIGAPMAEAIKYFANDKGLGFGVGIIIVTIIVRLIILPLGIYQSWKATLHSEKMN 94 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 ++ ++ + + K++ Q Q+A+ K H I+ GC+PILLQ+P F AIY Sbjct: 95 ALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A + G +P P + V I+ L + Sbjct: 155 FAAQHTEGVAQASYLG-------------------IPLGSPSMILVACAGILYYLQSLLS 195 Query: 505 MKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + Q ++ P++ V PA + +YW + I+QQ ++ + Sbjct: 196 LHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIVN--YIVR 253 Query: 564 IGLIDRLRSTFSKNY 578 L ++R +KN Sbjct: 254 PKLRKKVREELAKNP 268 >gi|149598665|ref|XP_001516970.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 411 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 89/230 (38%), Gaps = 36/230 (15%) Query: 345 PMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + L+ Y + +G + AI+ TV + L FPL K + N P+I +L + Sbjct: 106 MVQNLLEYIHIDMGLPWWGAIVTCTVAARCLIFPLIVKGQREAVKINNHMPEIQKLSARM 165 Query: 404 KQSPPQVLQKAMIQLY-------KTHNINPLAGCWPILLQIPVFF----AIYKVISISLE 452 ++ + + Y K H+++PL G L Q P+F A+ ++ + + Sbjct: 166 NEAKMSGDKFEFSRAYSDLQLYQKKHDVSPLRGFIVPLAQAPIFISFFIALREMAYLPVP 225 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + W DL ADP P++++ SM+ +++ Sbjct: 226 SMQSGGLLWFPDLTVADPFYAL-------------------PLLVTASMWAVLELGAETG 266 Query: 513 DKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ MP+V + FP + YW SN+ S+ Q A + Sbjct: 267 VNNANLRVMKTVIRVMPLVVLPFTIHFPTAVFTYWLSSNLFSLAQVAFLR 316 >gi|325685786|gb|EGD27859.1| membrane protein OxaA 2 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 320 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 96/237 (40%), Gaps = 34/237 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYV----STA 387 + W Y +I P+ + + +G G AI++ T+ V+++ PL Q Sbjct: 42 YYWIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLVVRVILMPLMLSQQHKATLQQE 101 Query: 388 NMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ L++ K L ++Y +N++ G C P+L+Q+P+ Sbjct: 102 KMHLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPLLIQMPIM 161 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + + F+G + I T+F ++ Sbjct: 162 IGIYQAVAYSNALAKSTFFGISLSSKSMVLAIIATVFALI-------------------Q 202 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ M P K + P++ F SF L +YW+ N++ ++QQ + Sbjct: 203 SYVAMIGIPEEQKKTMQATMLMNPIMTFFFSMSFSGALALYWAVGNLVMVIQQLITT 259 >gi|322385984|ref|ZP_08059624.1| SpoIIIJ family protein [Streptococcus cristatus ATCC 51100] gi|321269967|gb|EFX52887.1| SpoIIIJ family protein [Streptococcus cristatus ATCC 51100] Length = 337 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 84/220 (38%), Gaps = 29/220 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + + +PM + +F G +G+AI++ T+ V+L+ FPL Q + M Sbjct: 67 IWDVLGQPMADSIQFFAKNSGLGYGLAIIIVTLIVRLIIFPLGIYQSWKATLQSEKMNYF 126 Query: 393 QPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 +P ++E+ + Q Q+ ++ + + ++ G C P+L+Q+P F A++ Sbjct: 127 KPIFAPIQERINNAETQEEKLEAQQELMAAQRENGLSMFGGIGCLPLLIQMPFFSALFFA 186 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G + P+ TL + +Y+ + + Sbjct: 187 AQYTNGVASSTFLG----INLGKPSLALTLIVGVLYYIQSVLSLHG-------------- 228 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 + P++ V PA + +YW Sbjct: 229 IEDETQKAQMKSATYMSPIMIVVFSFMSPAAVTLYWVVGG 268 >gi|37521800|ref|NP_925177.1| putative inner membrane protein translocase component YidC [Gloeobacter violaceus PCC 7421] gi|35212798|dbj|BAC90172.1| glr2231 [Gloeobacter violaceus PCC 7421] Length = 369 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 71/119 (59%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ + Y +V N+G+ I+L T+ VK L +PL S M+ +Q Sbjct: 1 MDFGVGFLTNSVMLPILDFLYRIVPNYGVGIVLLTLIVKGLLWPLTAGSIRSMRKMQVVQ 60 Query: 394 PKID----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P++ E++EK+K P+ +Q+ M LYK + NPLAGC P+++Q+P+ FA++ + Sbjct: 61 PEMQRRTKEIQEKYKN-EPERMQQEMAGLYKEYG-NPLAGCLPLVVQMPILFALFATLR 117 Score = 65.0 bits (157), Expect = 4e-08, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 39/94 (41%), Gaps = 10/94 (10%) Query: 493 WPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVF--VFALSSFPAGLIIYWSWSNV 547 ++ +S++ M+ P + Q I P +F +F PAG+++Y SN+ Sbjct: 262 MIVLFGVSLYFSQNMTAKHNPSMTEQQKQINKITPFIFSGMFVFFPLPAGVLLYILLSNL 321 Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 IVQ ++ + L + ++ + + Sbjct: 322 FQIVQTYLLYR-----EPLPENIQRILDQAKRKE 350 >gi|71013508|ref|XP_758604.1| hypothetical protein UM02457.1 [Ustilago maydis 521] gi|46098262|gb|EAK83495.1| hypothetical protein UM02457.1 [Ustilago maydis 521] Length = 550 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 24/240 (10%) Query: 332 MLIDWGWFYFIAKP--MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 L + G +++ P + L+ + G + I +TTV ++LL P++ + Sbjct: 206 ELTELGLNHWVTPPGWITNLLEFVGTTTGLPWWGTITITTVALRLLIAPISIAGQKNAIR 265 Query: 389 MKNIQPKIDELR---EKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPV-- 439 + NIQP++ + +K + Q+ + A +L + +N NP+ PIL Q P+ Sbjct: 266 LGNIQPEMKRNMDDIKHYKAAGDQMQMQKAVMATQKLLRDNNANPIKSLVPILFQFPLMF 325 Query: 440 --FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 F A+ ++ E W DL DPT I L + VG Sbjct: 326 SYFLALERIAKSGSESFAHGGPFWTTDLTVPDPTWILPAISTLATF--AVAEVGFKVGTN 383 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S S P + I + + ++FP+G+++YW+ +N+ S+ Q A++ Sbjct: 384 S--------QSDPAQSQMMKYIFRGFMPILAWFSTTFPSGVLVYWATTNLYSLAQLAILQ 435 >gi|17230907|ref|NP_487455.1| putative inner membrane protein translocase component YidC [Nostoc sp. PCC 7120] gi|38503115|sp|Q8YRM9|OXAA_ANASP RecName: Full=Inner membrane protein oxaA gi|17132548|dbj|BAB75114.1| alr3415 [Nostoc sp. PCC 7120] Length = 380 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 71/119 (59%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY++V ++G+AI+ T+ ++ +PL+ Q + M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P ++ E++E++K P Q Q+ M+ + K NPLAGC P+LLQ+PV A++ + Sbjct: 61 PLMQKRMAEIKERYKDDP-QKQQEEMMNVQKEFG-NPLAGCLPLLLQMPVLLALFATLR 117 Score = 57.3 bits (137), Expect = 8e-06, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 35/95 (36%), Gaps = 5/95 (5%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFA 530 G + + + +S+++ +S + + Q + PV+F Sbjct: 253 LGRVGAIDPDNTIHWDIVGMIVFFGISLYVSQMLSGQNSSGGNPQQDTVNKITPVIFSGM 312 Query: 531 LSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP AG+++Y NV +Q ++ + E Sbjct: 313 FLFFPLPAGVLMYMVIGNVFQTLQTYILSREPLPE 347 >gi|325474004|gb|EGC77192.1| hypothetical protein HMPREF9353_01542 [Treponema denticola F0402] Length = 954 Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 26/253 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G Y + + +Y YN+ GN+GIA++L ++F+ + PL K +Q K+ Sbjct: 10 GLLYPFVVLIQTVFTYSYNICGNYGIALILLSLFITAITAPLYYLAERWKNKEKVVQKKM 69 Query: 397 ----DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 + E ++ L KA ++Y + +++QIP FFA Y+V+S Sbjct: 70 HKDIKSINENYEGQKRFYLTKAARKIYDYKWWYTFRTSFGLIIQIPFFFAAYEVLSKYSG 129 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + +IKDL D N+ + +LPF +I K A Sbjct: 130 YNGVS-FLFIKDLGLPD--NLVSGVNVLPFV---------MTLINIAYSIYYTKSKSWNA 177 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI----- 567 +K L M +F+ L + P+ L++YW+ +NV S ++ ++ K +E+ +I Sbjct: 178 NKE----LYIMAGIFLVLLYNSPSALLLYWTMNNVFSFIKGIILRKAGLSEVPVIIESGA 233 Query: 568 -DRLRSTFSKNYN 579 L+ +N N Sbjct: 234 DKSLKEIIKENIN 246 >gi|75909641|ref|YP_323937.1| putative inner membrane protein translocase component YidC [Anabaena variabilis ATCC 29413] gi|75703366|gb|ABA23042.1| 60 kDa inner membrane insertion protein [Anabaena variabilis ATCC 29413] Length = 380 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 71/119 (59%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY++V ++G+AI+ T+ ++ +PL+ Q + M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P ++ E++E++K P Q Q+ M+ + K NPLAGC P+LLQ+PV A++ + Sbjct: 61 PLMQKRMAEIKERYKDDP-QKQQEEMMNVQKEFG-NPLAGCLPLLLQMPVLLALFATLR 117 Score = 58.1 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFA 530 G + + + +S++ +S + + Q + PV+F Sbjct: 253 LGRVGAIDPDNTIHWDIVGMIVFFGISLYFSQMLSGQNSSGGNPQQDTVNKITPVIFSGM 312 Query: 531 LSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 FP AG+++Y NV +Q ++ + E I ++ T K ++ Sbjct: 313 FLFFPLPAGVLMYMVIGNVFQTLQTYILSREPLPEE--IQKIVETQEKQAQAE 363 >gi|86609684|ref|YP_478446.1| inner membrane protein translocase component YidC [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558226|gb|ABD03183.1| inner membrane protein OxaA [Synechococcus sp. JA-2-3B'a(2-13)] Length = 396 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 5/119 (4%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + MK I Sbjct: 1 MDFGVGFLSNNVMLPILDFFYGIVPSYGLAIIFLTLVIRFALYPLNVGSIRNMRRMKVIS 60 Query: 394 PKID----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + EL+EK++ P Q L++A +LY NPL GC P+L+Q+PV FA++ + Sbjct: 61 PVMQRRMRELQEKYRDDP-QKLREAQAKLYSELGANPLGGCLPLLIQMPVLFALFATLR 118 Score = 63.1 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 12/113 (10%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-----KGQAMILNWMPVVF- 527 G + +I +S+++ ++ D Q+ + PV+F Sbjct: 256 LGRVGAFDEDGTIHWDIIAMIVIFGVSIYLNQYLTNAGQDTGKEDPSQSSMARITPVLFS 315 Query: 528 -VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 +F PAG+++Y SN+ VQ ++ + L + L+ + Sbjct: 316 AMFLFFPLPAGVLLYILVSNIFQTVQTFLLSR-----EPLPENLQQLVEEERR 363 >gi|126278077|ref|XP_001379890.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 518 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 97/245 (39%), Gaps = 37/245 (15%) Query: 331 EMLIDWGWFYFIAKPM-FMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + L D G F + L+ + + +L + AI+ TV +++ FPL K Sbjct: 192 QSLSDLGLGGFTPVGLVQNLLEFVHVDLGLPWWGAIVTCTVVARIMIFPLIVKGQREAVK 251 Query: 389 MKNIQPKIDELREKFKQSP----PQVLQKAMIQLY---KTHNINPLAGCWPILLQIPVFF 441 + N P+I + + ++ +A +L K H+++PL G L Q PVF Sbjct: 252 INNHMPEIQKFSTRMNEAKLSGDKFEFSRAFSELQLYQKKHDVSPLRGFIVPLAQAPVFI 311 Query: 442 ----AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 A+ ++ + + W +DL AADP P+++ Sbjct: 312 SFFIALREMAYLPVPSMQNGGLWWFQDLTAADPLYAL-------------------PLLV 352 Query: 498 SLSMFIQMKMS-----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + SM+ +++ + + +P++ + +FP + YW SN+ S+ Q Sbjct: 353 TASMWAILELGAETGVNNANLRMMKTVFRVLPLIVLPFTINFPTAVFTYWFSSNLFSLAQ 412 Query: 553 QAVIM 557 + + Sbjct: 413 VSFLQ 417 >gi|307128506|ref|YP_003880536.1| inner membrane protein YidC [Candidatus Sulcia muelleri CARI] gi|306482968|gb|ADM89838.1| inner membrane protein YidC [Candidatus Sulcia muelleri CARI] Length = 520 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 85/485 (17%), Positives = 189/485 (38%), Gaps = 52/485 (10%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 V ++N L SI+ G +L L+ Y + +N + L+ +++ Y Sbjct: 55 VIIENNVLKLSISTIGGNIKNLFLKRYK-NYHNNDENLYLIKDNSSLFGLEFTNKYCKKL 113 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190 N E+ + + + I + K NN+ + + + I ++ Sbjct: 114 NTYEV---EFIPKIKEDEF---KYTINMHAKLDNNVSIYYVYVIYKKNNYNIDFSIRTKG 167 Query: 191 -----IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 + ++ + + K Q N + I +K + + + +K ++ Sbjct: 168 FSDFLSTNLEWNQK-LLRLEKDQKIENNYNK----IFYSINKLKKKINFLN-QKKNLHKK 221 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQ-----FKYLSDGHARYQAKFSANEITILPGK 300 ++ W+ +++ S+ + + F + H+ + +I K Sbjct: 222 AKNIYWIANKQQFFVSILLFKTPLKIYKSKKIIFFLKNENVHSINKISNLKIKIINKNNK 281 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG--WFYFIAKPMF-MLMSYFYNLV 357 +N + ++ + + FE LI +G +I + +F L S Sbjct: 282 EFNLSNKWYFCPLDYNLLKKNKY-----GFENLIQFGGGVVKYINRYVFLYLFSILEKTN 336 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKAMI 416 N+G+ I+L T+ VKL+ P+ QY + ++ + D++ + KFK + Sbjct: 337 FNYGLIIILMTIIVKLIILPITYNQYKLNSIIEIFRTSFDDINQNKFKN----------L 386 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +L K IN ++QIP+F++++ + + +R + WI +L D +IF L Sbjct: 387 KLDKKIVIN---SILYAIIQIPIFYSLFNLFPTLINLRGKS-FLWIDNLTYYD--SIFNL 440 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 +P Y H+ + I+ S+S+ I K++ I M ++ + ++++ + Sbjct: 441 KFNIPIYG---NHISLLTILYSISLLILRKINNSKYKTNNNSI-YIMSIIILLFINNYSS 496 Query: 537 GLIIY 541 GL +Y Sbjct: 497 GLYLY 501 >gi|148989975|ref|ZP_01821250.1| SpoIIIJ family protein [Streptococcus pneumoniae SP6-BS73] gi|149003634|ref|ZP_01828499.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69] gi|237650993|ref|ZP_04525245.1| OxaA-like protein precursor [Streptococcus pneumoniae CCRI 1974] gi|237822551|ref|ZP_04598396.1| OxaA-like protein precursor [Streptococcus pneumoniae CCRI 1974M2] gi|147758366|gb|EDK65366.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69] gi|147924635|gb|EDK75721.1| SpoIIIJ family protein [Streptococcus pneumoniae SP6-BS73] Length = 308 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 105/257 (40%), Gaps = 34/257 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ + I PM + YF G FG+AI++ T+ V+L+ PL Q + M Sbjct: 35 GFIWNTIGAPMAEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMN 94 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++ ++ + + K++ Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 95 ALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A + G +P P + V ++ L + Sbjct: 155 FAAQHTEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLS 195 Query: 505 MKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + Q ++ P++ V PA + +YW + I+QQ ++ + Sbjct: 196 LHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIVN--YIVR 253 Query: 564 IGLIDRLRSTFSKNYNS 580 L ++R +KN + Sbjct: 254 PKLRKKVREELAKNPSK 270 >gi|313124172|ref|YP_004034431.1| preprotein translocase subunit yidc [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280735|gb|ADQ61454.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 320 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 96/237 (40%), Gaps = 34/237 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYV----STA 387 + W Y +I P+ + + +G G AI++ T+ V+++ PL Q Sbjct: 42 YYWIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLGVRVILMPLMLSQQHKATLQQE 101 Query: 388 NMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ L++ K L ++Y +N++ G C P+L+Q+P+ Sbjct: 102 KMHLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPLLIQMPIM 161 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + + F+G + I T+F ++ Sbjct: 162 IGIYQAVAYSNALAKSTFFGISLSSKSMVLAIIATVFALI-------------------Q 202 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ M P K + P++ F SF L +YW+ N++ ++QQ + Sbjct: 203 SYVAMIGIPEEQKKTMQATMLMNPIMTFFFSMSFSGALALYWAVGNLVMVIQQLITT 259 >gi|237784737|ref|YP_002905442.1| putative inner membrane protein translocase component YidC [Corynebacterium kroppenstedtii DSM 44385] gi|237757649|gb|ACR16899.1| putative membrane protein [Corynebacterium kroppenstedtii DSM 44385] Length = 447 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 113/293 (38%), Gaps = 51/293 (17%) Query: 338 WFYFIAKPMFMLMSYFY--------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + A P+ ++ ++ + + ++ ++ L + V+L+ P A QY ST Sbjct: 2 IYSLFAYPVSGVIKLWHVLLTALGADPISSWIASLFLLVMTVRLILLPFAYAQYKSTRIQ 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 N++P I+++RE++K P +K + K AGC P+ +Q+P F +Y+ Sbjct: 62 VNLRPVINQIREEYKDKPGTAARKERIAKEQKARKDAGYRLSAGCLPVFIQLPFFLGLYR 121 Query: 446 VISISLEMRHA---PFWGWIKDLAAADPTNIFT--LFGI-LPFYLP-------------G 486 V+ + I L + D FG+ LP Y Sbjct: 122 VLIHMARPKGGLGTTEHQPIGFLTSQDVGQFLQAKAFGVPLPAYAAMASERLQAMGTDKS 181 Query: 487 FMHVGIWPIIMSLSMFIQMKMS-------------PPPADKGQAMI--LNWM----PVVF 527 ++ P+++ S F + MS P A + Q +I + M P++F Sbjct: 182 TIYTLAVPLVLIASTFTTINMSYSTYRSYRQLEHDNPIAVRMQKIIIPMAIMGSASPLLF 241 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 S P ++ YW +N+ ++ Q ++ + + R F++ Sbjct: 242 G-LTSPVPVAILFYWVGNNLWTMSQNILLYRTIDKKYPYTQEFREHFARTKAE 293 >gi|91095209|ref|XP_968413.1| PREDICTED: similar to cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Tribolium castaneum] gi|270015977|gb|EFA12425.1| hypothetical protein TcasGA2_TC001816 [Tribolium castaneum] Length = 436 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 94/233 (40%), Gaps = 38/233 (16%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA+ F + NL + AI++ T+ +++ FPL + A M N P++ ++ Sbjct: 142 IAQTCFEYLHI--NLGVPWWEAIVIGTLVIRICLFPLVIIAQRNAAKMNNYMPQLQAIQL 199 Query: 402 KFKQSPPQVLQ-------KAMIQLYKTHNINPLAGCWPILLQIPV----FFAIYKVISIS 450 K ++ Q + ++ K +NPL L Q+PV F A+ ++ ++ Sbjct: 200 KMTEARQSGNQLEVARYSQELMIFMKEKQLNPLKNMIVPLAQMPVFVSFFMALREMSNVP 259 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E W DL D + P+I S ++F +++ Sbjct: 260 IESLRTGGLWWFTDLTVPDQYFL-------------------MPLITSATLFATIELGTD 300 Query: 511 PAD------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 A + +L +PV+ + +FP ++ YW SN IS++Q + Sbjct: 301 TAKLSSQNLQTMKYVLRAVPVIVLPFTINFPGAILCYWVSSNFISLLQVGFLK 353 >gi|306834795|ref|ZP_07467859.1| membrane protein OxaA [Corynebacterium accolens ATCC 49726] gi|304569323|gb|EFM44824.1| membrane protein OxaA [Corynebacterium accolens ATCC 49726] Length = 304 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 96/255 (37%), Gaps = 58/255 (22%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + +AI+L T +K L Q S+ M+ IQPK+ E+R K+ + + Q M ++Y Sbjct: 9 WILAIVLLTWTLKALMVKPTVSQIRSSRKMQEIQPKVQEIRAKYGKDQARAAQ-EMQKVY 67 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVIS---ISLEMRHAPFWGWIKDLAAADPTNIFTL 476 K + P+AGC P+L+QIP+F ++ V+ ++ + + ++ D N Sbjct: 68 KDAGVRPMAGCLPVLVQIPMFIGLFHVLRSFDRTVSVAGGFGHPSGEPMSIEDNANTANY 127 Query: 477 F-------------------------------GILPFYLPGFMHVGIWPIIMSLSMF-IQ 504 G+ F+ V + +I+ L F + Sbjct: 128 IFKPELVQQFLDAKIFGVPLVTNLRLNSPLVEGVTTTTQAAFIIVPMIAVIVVLMHFNAR 187 Query: 505 MKMSPPPADKGQAMI----------------------LNWMPVVFVFALSSFPAGLIIYW 542 M ++ + Q L MP + +F+ +P GL+ Y Sbjct: 188 MSLNRQEKRRAQGKTSAPQGQNAEMMQQQMAMMSKMMLWVMPAMLIFSGFIWPIGLLFYM 247 Query: 543 SWSNVISIVQQAVIM 557 + V + Q +I Sbjct: 248 LSNTVWTFFQTRIIY 262 >gi|289167183|ref|YP_003445450.1| oxaA2 [Streptococcus mitis B6] gi|288906748|emb|CBJ21582.1| oxaA2 [Streptococcus mitis B6] Length = 308 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 105/254 (41%), Gaps = 32/254 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ + I PM + YF N G FG+ I++ T+ V+L+ PL Q + M Sbjct: 35 GFIWNTIGAPMAEAIKYFANDKGLGFGVGIIIVTIIVRLIILPLGIYQSWKATLHSEKMN 94 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIY 444 ++ ++ + + K++ Q Q+A+ K H I+ GC+P+LLQ+P F AIY Sbjct: 95 ALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGIGCFPVLLQMPFFSAIY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A + G + P+ I F + +YL + + Sbjct: 155 FAAQHTEGVAQASYLG----IPLGSPSMILVAFAGILYYLQSLLSLHG------------ 198 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + + ++ P++ V PA + +YW + I+QQ ++ + Sbjct: 199 --VEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIVN--YIVRP 254 Query: 565 GLIDRLRSTFSKNY 578 L ++R +KN Sbjct: 255 KLRKKVREELAKNP 268 >gi|218437889|ref|YP_002376218.1| inner membrane protein translocase component YidC [Cyanothece sp. PCC 7424] gi|218170617|gb|ACK69350.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 7424] Length = 381 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 68/119 (57%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ Q + M+ Q Sbjct: 1 MDFGVGFISTNIMLPILDFFYRIVPSYGFAIIALTLVIRFALYPLSAGQIRNMRKMRITQ 60 Query: 394 PKID----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E+++++K P Q Q+ M +L + NPLAGC P+L+Q+P+ FA++ + Sbjct: 61 PLMKERQEEIQKRYKNDP-QKQQEEMGKLMQEFG-NPLAGCLPLLVQMPILFALFATLR 117 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 43/114 (37%), Gaps = 11/114 (9%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP----PADKGQAMILNWMPVVFVF 529 G + + + +S++I ++S + Q + PV+F Sbjct: 253 LGRVGAVSDDGKIHWDILGMVLFFGISIYINQELSGSKSGGANAQQQQAVNKITPVIFSG 312 Query: 530 ALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 FP AG+++Y +N+ +Q ++M+ L + L+ + ++ Sbjct: 313 MFLFFPLPAGVLMYIVVANIFQTIQTVILMR-----EPLPENLQKLLEQQEKTE 361 >gi|241999556|ref|XP_002434421.1| cytochrome oxidase biogenesis protein, putative [Ixodes scapularis] gi|215497751|gb|EEC07245.1| cytochrome oxidase biogenesis protein, putative [Ixodes scapularis] Length = 426 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 51/226 (22%), Positives = 88/226 (38%), Gaps = 29/226 (12%) Query: 345 PMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + + ++ G + I L TV VKLL FP K +T +M N P++ L+ K Sbjct: 128 MVQHCLDLLHSSTGLPWWATIALGTVVVKLLVFPAILKGQKNTIHMNNHLPQMQVLQAKL 187 Query: 404 KQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF----FAIYKVISISLE 452 ++ ++ K INPL ++Q PVF FA+ + ++ +E Sbjct: 188 SEARSSVFVLDSARYANELMLFMKEKQINPLKNMIIPMVQAPVFISFFFALRGMANLPME 247 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGI-LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 W DL DP + L I L + G+ + + + Sbjct: 248 SFKTGGMLWFTDLTIPDPYCLLPLITIRLSRVVALGAESGVRADNLQWTRY--------- 298 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + MP+V +FPA L+ YW+ SN+ ++ Q ++ Sbjct: 299 -------VFRAMPIVIFPFTMNFPAALLCYWATSNMFTLAQVGLLR 337 >gi|15901798|ref|NP_346402.1| OxaA-like protein precursor [Streptococcus pneumoniae TIGR4] gi|111658862|ref|ZP_01409483.1| hypothetical protein SpneT_02000033 [Streptococcus pneumoniae TIGR4] gi|148993164|ref|ZP_01822730.1| OxaA-like protein precursor [Streptococcus pneumoniae SP9-BS68] gi|149007450|ref|ZP_01831093.1| OxaA-like protein precursor [Streptococcus pneumoniae SP18-BS74] gi|168489980|ref|ZP_02714179.1| membrane protein OxaA 2 [Streptococcus pneumoniae SP195] gi|182684910|ref|YP_001836657.1| oxaA-like protein precursor [Streptococcus pneumoniae CGSP14] gi|225859731|ref|YP_002741241.1| OxaA-like protein precursor [Streptococcus pneumoniae 70585] gi|225861793|ref|YP_002743302.1| OxaA-like protein precursor [Streptococcus pneumoniae Taiwan19F-14] gi|303254101|ref|ZP_07340216.1| OxaA-like protein precursor [Streptococcus pneumoniae BS455] gi|303260348|ref|ZP_07346318.1| oxaA-like protein precursor [Streptococcus pneumoniae SP-BS293] gi|303262496|ref|ZP_07348438.1| oxaA-like protein precursor [Streptococcus pneumoniae SP14-BS292] gi|303265127|ref|ZP_07351040.1| oxaA-like protein precursor [Streptococcus pneumoniae BS397] gi|303266011|ref|ZP_07351906.1| oxaA-like protein precursor [Streptococcus pneumoniae BS457] gi|303268057|ref|ZP_07353858.1| oxaA-like protein precursor [Streptococcus pneumoniae BS458] gi|307128174|ref|YP_003880205.1| membrane protein OxaA 2 [Streptococcus pneumoniae 670-6B] gi|38503145|sp|Q97NP5|OXAA2_STRPN RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|254778167|sp|C1CTN0|OXAA_STRZT RecName: Full=Membrane protein oxaA; Flags: Precursor gi|14973482|gb|AAK76042.1| SpoIIIJ family protein [Streptococcus pneumoniae TIGR4] gi|147761022|gb|EDK67991.1| OxaA-like protein precursor [Streptococcus pneumoniae SP18-BS74] gi|147928138|gb|EDK79156.1| OxaA-like protein precursor [Streptococcus pneumoniae SP9-BS68] gi|182630244|gb|ACB91192.1| oxaA-like protein precursor [Streptococcus pneumoniae CGSP14] gi|183571634|gb|EDT92162.1| membrane protein OxaA 2 [Streptococcus pneumoniae SP195] gi|225721166|gb|ACO17020.1| membrane protein OxaA 2 [Streptococcus pneumoniae 70585] gi|225727287|gb|ACO23138.1| membrane protein OxaA 2 [Streptococcus pneumoniae Taiwan19F-14] gi|301802653|emb|CBW35419.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae INV200] gi|302598934|gb|EFL65965.1| OxaA-like protein precursor [Streptococcus pneumoniae BS455] gi|302636396|gb|EFL66889.1| oxaA-like protein precursor [Streptococcus pneumoniae SP14-BS292] gi|302638514|gb|EFL68979.1| oxaA-like protein precursor [Streptococcus pneumoniae SP-BS293] gi|302642417|gb|EFL72763.1| oxaA-like protein precursor [Streptococcus pneumoniae BS458] gi|302644452|gb|EFL74704.1| oxaA-like protein precursor [Streptococcus pneumoniae BS457] gi|302645344|gb|EFL75578.1| oxaA-like protein precursor [Streptococcus pneumoniae BS397] gi|306485236|gb|ADM92105.1| membrane protein OxaA 2 [Streptococcus pneumoniae 670-6B] gi|327389140|gb|EGE87486.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA04375] gi|332071953|gb|EGI82441.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA17545] gi|332072057|gb|EGI82544.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA17570] Length = 308 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 34/255 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ + I PM + YF G FG+AI++ T+ V+L+ PL Q + M Sbjct: 35 GFIWNTIGAPMAEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMN 94 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++ ++ + + K++ Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 95 ALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A + G +P P + V ++ L + Sbjct: 155 FAAQHTEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLS 195 Query: 505 MKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + Q ++ P++ V PA + +YW + I+QQ ++ + Sbjct: 196 LHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIVN--YIVR 253 Query: 564 IGLIDRLRSTFSKNY 578 L ++R +KN Sbjct: 254 PKLRKKVREELAKNP 268 >gi|156401497|ref|XP_001639327.1| predicted protein [Nematostella vectensis] gi|156226455|gb|EDO47264.1| predicted protein [Nematostella vectensis] Length = 308 Score = 123 bits (310), Expect = 7e-26, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 98/229 (42%), Gaps = 36/229 (15%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + + + VG + +I+ T+ + L FPL K + A + N++P+++E++ + + Sbjct: 26 VQHALEMLHATVGLPWVWSIVAATIAFRTLMFPLIVKSQANAARLNNVKPELEEVQAQLR 85 Query: 405 Q--SPPQVLQKA-----MIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 + + KA + QLYK ++ +P+ L+Q+P+F + ++ ++ +E Sbjct: 86 DLMNSNNAIGKAAASARLQQLYKDNDCHPIKSIIAPLVQVPLFISFFVGLRRMANLPVES 145 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS----- 508 W DL A DP + PI+ SL+M +++ Sbjct: 146 FKEGGLFWFTDLTAYDPYFVL-------------------PIVCSLTMLASIELGGEAGV 186 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P + M V + + FPA + YW SN+ S+ Q +++ Sbjct: 187 SNPQMQHMKTFFRVMCVAMIPLTAQFPAAIFTYWVTSNLFSLGQVSLLK 235 >gi|148985555|ref|ZP_01818744.1| OxaA-like protein precursor [Streptococcus pneumoniae SP3-BS71] gi|168492050|ref|ZP_02716193.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC0288-04] gi|147922275|gb|EDK73396.1| OxaA-like protein precursor [Streptococcus pneumoniae SP3-BS71] gi|183573673|gb|EDT94201.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC0288-04] gi|301800737|emb|CBW33385.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae OXC141] Length = 308 Score = 123 bits (310), Expect = 7e-26, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 34/255 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ + I PM + YF G FG+AI++ T+ V+L+ PL Q + M Sbjct: 35 GFIWNTIGAPMAEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMN 94 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++ ++ + + K++ Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 95 ALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A + G +P P + V ++ L + Sbjct: 155 FAAQHTEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLS 195 Query: 505 MKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + Q ++ P++ V PA + +YW + I+QQ ++ + Sbjct: 196 LHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIVN--YIVR 253 Query: 564 IGLIDRLRSTFSKNY 578 L ++R +KN Sbjct: 254 PKLRKKVREELAKNP 268 >gi|149012436|ref|ZP_01833467.1| OxaA-like protein precursor [Streptococcus pneumoniae SP19-BS75] gi|168494784|ref|ZP_02718927.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC3059-06] gi|221232700|ref|YP_002511854.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae ATCC 700669] gi|298230172|ref|ZP_06963853.1| OxaA-like protein precursor [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254778|ref|ZP_06978364.1| OxaA-like protein precursor [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503746|ref|YP_003725686.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus pneumoniae TCH8431/19A] gi|147763492|gb|EDK70428.1| OxaA-like protein precursor [Streptococcus pneumoniae SP19-BS75] gi|183575319|gb|EDT95847.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC3059-06] gi|220675162|emb|CAR69746.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae ATCC 700669] gi|298239341|gb|ADI70472.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus pneumoniae TCH8431/19A] Length = 308 Score = 123 bits (310), Expect = 7e-26, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 34/255 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ + I PM + YF G FG+AI++ T+ V+L+ PL Q + M Sbjct: 35 GFIWNTIGAPMAEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMN 94 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++ ++ + + K++ Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 95 ALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A + G +P P + V ++ L + Sbjct: 155 FAAQHTEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLS 195 Query: 505 MKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + Q ++ P++ V PA + +YW + I+QQ ++ + Sbjct: 196 LHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIVN--YIVR 253 Query: 564 IGLIDRLRSTFSKNY 578 L ++R +KN Sbjct: 254 PKLRKKVREELAKNP 268 >gi|300813188|ref|ZP_07093562.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300495846|gb|EFK30994.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 320 Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 96/237 (40%), Gaps = 34/237 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYV----STA 387 + W Y +I P+ + + +G G AI++ T+ V+++ PL Q Sbjct: 42 YYWIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLGVRVILMPLMLSQQHKATLQQE 101 Query: 388 NMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ L++ K L ++Y +N++ G C P+L+Q+P+ Sbjct: 102 KMHLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPLLIQMPIM 161 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + + F+G + I T+F ++ Sbjct: 162 IGIYQAVAYSNALAKSTFFGISLSSKSMVLAIIATVFALI-------------------Q 202 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ M P K + P++ F SF L +YW+ N++ ++QQ + Sbjct: 203 SYVAMIGIPEEQKKTMQATMLMNPIMTFFFSMSFSGALALYWAVGNLVMVIQQLITT 259 >gi|255028899|ref|ZP_05300850.1| SpoIIIJ protein [Listeria monocytogenes LO28] Length = 160 Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats. Identities = 42/119 (35%), Positives = 74/119 (62%), Gaps = 4/119 (3%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ +++F +L G ++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE 160 >gi|148998505|ref|ZP_01825946.1| OxaA-like protein precursor [Streptococcus pneumoniae SP11-BS70] gi|149021925|ref|ZP_01835912.1| OxaA-like protein precursor [Streptococcus pneumoniae SP23-BS72] gi|168487113|ref|ZP_02711621.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1087-00] gi|168576625|ref|ZP_02722491.1| membrane protein OxaA 2 [Streptococcus pneumoniae MLV-016] gi|225855465|ref|YP_002736977.1| OxaA-like protein precursor [Streptococcus pneumoniae JJA] gi|225857549|ref|YP_002739060.1| OxaA-like protein precursor [Streptococcus pneumoniae P1031] gi|307068584|ref|YP_003877550.1| preprotein translocase subunit YidC [Streptococcus pneumoniae AP200] gi|147755698|gb|EDK62744.1| OxaA-like protein precursor [Streptococcus pneumoniae SP11-BS70] gi|147929963|gb|EDK80951.1| OxaA-like protein precursor [Streptococcus pneumoniae SP23-BS72] gi|183569986|gb|EDT90514.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1087-00] gi|183577623|gb|EDT98151.1| membrane protein OxaA 2 [Streptococcus pneumoniae MLV-016] gi|225723420|gb|ACO19273.1| membrane protein OxaA 2 [Streptococcus pneumoniae JJA] gi|225724602|gb|ACO20454.1| membrane protein OxaA 2 [Streptococcus pneumoniae P1031] gi|301794918|emb|CBW37379.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae INV104] gi|306410121|gb|ADM85548.1| Preprotein translocase subunit YidC [Streptococcus pneumoniae AP200] gi|332072161|gb|EGI82647.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA41301] gi|332199290|gb|EGJ13368.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA41317] gi|332199987|gb|EGJ14061.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA47901] Length = 308 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 34/255 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ + I PM + YF G FG+AI++ T+ V+L+ PL Q + M Sbjct: 35 GFIWNTIGAPMAEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMN 94 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++ ++ + + K++ Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 95 ALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A + G +P P + V ++ L + Sbjct: 155 FAAQHTEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLS 195 Query: 505 MKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + Q ++ P++ V PA + +YW + I+QQ ++ + Sbjct: 196 LHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIVN--YIVR 253 Query: 564 IGLIDRLRSTFSKNY 578 L ++R +KN Sbjct: 254 PKLRKKVREELAKNP 268 >gi|238917977|ref|YP_002931494.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC 27750] gi|238873337|gb|ACR73047.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC 27750] Length = 423 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 67/327 (20%), Positives = 122/327 (37%), Gaps = 88/327 (26%) Query: 342 IAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 I KP+ L+ Y +++ GN IAI++ T+ VK+L PL KQ T + Sbjct: 14 IIKPIAQLLGYILDILFKGLNAMGIGNIAIAIIIFTLLVKMLMLPLQIKQQKMTKLQSVM 73 Query: 393 QPKIDELREKFKQSP-----PQVLQKAMIQLYKTHNINPLAGCWPILLQ----------- 436 P+I ++EK+K Q +Q +Y+ + ++ C +L+Q Sbjct: 74 NPEIKAIQEKYKGKNSDTVAMQKMQAETKAVYEKYGVSQWGSCVQLLIQMPILFALYRVF 133 Query: 437 --IPVFFAIYKVISISLEMRHA-------------------------------------- 456 IP++ + KV+ +++ + Sbjct: 134 QQIPLYISQIKVLFLNILGVNGVDGISSVSGYADTLNEIYGKTVDWSNTSTAVTTLNSFT 193 Query: 457 -----------PFWGWIKDLAAADPTNIFTLFGILPFYLPGF-MHVGIW-PIIMSLSMFI 503 P + + ++ T G+ PGF +H+ I PI+ ++ FI Sbjct: 194 ADQWTKLKEAFPAFSDMITQNLDKINHMNTFLGVNMSQNPGFGLHIAILIPILAGVTQFI 253 Query: 504 QMKMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 +K+S PA M+ +MP++ F S P+GL +YW + VI +Q Sbjct: 254 SVKVSQAGMEQPDSDNPAAASMKMMTYFMPIMSAFLAISLPSGLGVYWIATAVIQTIQTI 313 Query: 555 VIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 I + + +IG + K + Sbjct: 314 FINRYYD-KIGTDKIVEKNVEKRNKKR 339 >gi|290579922|ref|YP_003484314.1| putative inner membrane protein [Streptococcus mutans NN2025] gi|254996821|dbj|BAH87422.1| putative inner membrane protein [Streptococcus mutans NN2025] Length = 284 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 62/256 (24%), Positives = 99/256 (38%), Gaps = 37/256 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLT--TVFVKLLFFPLAKKQYVST----AN 388 GW Y F A PM ++ Y N +G FG AI TV V+LL PL Q Sbjct: 10 GWVYKFFAAPMGSVIQYLANNLGLGFGFAI--IIVTVIVRLLILPLGLSQVRKMTYQSEK 67 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFA 442 M ++P D ++E+ K + Q Q ++Q + + ++ GC P+L+Q+P F A Sbjct: 68 MAYLKPVFDPIQERMKNAKTQEEKMAAQTELMQAQRHYGMSMFGGLGCLPLLIQMPFFSA 127 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y + + A F G + P I T+ + + + ++ P Sbjct: 128 LYISTRYTKGIASASFLG----IKLGSPNMIITVIIGILYLVQSWVSTLSVPEAQRQQTR 183 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 M M P PAG +YW S + ++QQ + H Sbjct: 184 NMMFMMPIMMVMI---------------SIGAPAGGALYWLVSGIFGLIQQLITN--HII 226 Query: 563 EIGLIDRLRSTFSKNY 578 + L ++ F KN Sbjct: 227 KPKLRKQIDEEFKKNP 242 >gi|168484274|ref|ZP_02709226.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1873-00] gi|169833583|ref|YP_001695329.1| OxaA-like protein precursor [Streptococcus pneumoniae Hungary19A-6] gi|194397013|ref|YP_002038558.1| OxaA-like protein precursor [Streptococcus pneumoniae G54] gi|168996085|gb|ACA36697.1| membrane protein OxaA 2 [Streptococcus pneumoniae Hungary19A-6] gi|172042503|gb|EDT50549.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1873-00] gi|194356680|gb|ACF55128.1| SpoIIIJ family protein [Streptococcus pneumoniae G54] gi|332199401|gb|EGJ13478.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA47368] Length = 308 Score = 123 bits (308), Expect = 9e-26, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 104/255 (40%), Gaps = 34/255 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ + I PM + YF G FG+AI++ T+ V+L+ PL Q + M Sbjct: 35 GFIWNTIGAPMAEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMN 94 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++ ++ + + K++ Q Q+A+ K H I+ G C+P+LLQ+P F AIY Sbjct: 95 ALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPLLLQMPFFSAIY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A + G +P P + V ++ L + Sbjct: 155 FAAQHTEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLS 195 Query: 505 MKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + Q ++ P++ V PA + +YW + I+QQ ++ + Sbjct: 196 LHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIVN--YIVR 253 Query: 564 IGLIDRLRSTFSKNY 578 L ++R +KN Sbjct: 254 PKLRKKVREELAKNP 268 >gi|24380099|ref|NP_722054.1| OxaA-like protein precursor [Streptococcus mutans UA159] gi|38503007|sp|Q8DSP8|OXAA2_STRMU RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|24378095|gb|AAN59360.1|AE015001_5 putative inner membrane protein [Streptococcus mutans UA159] Length = 310 Score = 123 bits (308), Expect = 9e-26, Method: Composition-based stats. Identities = 62/256 (24%), Positives = 99/256 (38%), Gaps = 37/256 (14%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLT--TVFVKLLFFPLAKKQYVST----AN 388 GW Y F A PM ++ Y N +G FG AI TV V+LL PL Q Sbjct: 36 GWVYKFFAAPMGSVIQYLANNLGLGFGFAI--IIVTVIVRLLILPLGLSQVRKMTYQSEK 93 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFA 442 M ++P D ++E+ K + Q Q ++Q + + ++ GC P+L+Q+P F A Sbjct: 94 MAYLKPVFDPIQERMKNAKTQEEKMAAQTELMQAQRHYGMSMFGGLGCLPLLIQMPFFSA 153 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y + + A F G + P I T+ + + + ++ P Sbjct: 154 LYISTRYTKGIASASFLG----IKLGSPNMIITVIIGILYLVQSWVSTLSVPEAQRQQTR 209 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 M M P PAG +YW S + ++QQ + H Sbjct: 210 NMMFMMPIMMVMI---------------SIGAPAGGALYWLVSGIFGLIQQLITN--HII 252 Query: 563 EIGLIDRLRSTFSKNY 578 + L ++ F KN Sbjct: 253 KPKLRKQIDEEFKKNP 268 >gi|15903832|ref|NP_359382.1| OxaA-like protein precursor [Streptococcus pneumoniae R6] gi|116517062|ref|YP_817195.1| OxaA-like protein precursor [Streptococcus pneumoniae D39] gi|38503005|sp|Q8DNE1|OXAA2_STRR6 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|15459474|gb|AAL00593.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116077638|gb|ABJ55358.1| SpoIIIJ family protein [Streptococcus pneumoniae D39] Length = 308 Score = 123 bits (308), Expect = 9e-26, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 34/257 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ + I PM + YF G FG+AI++ T+ V+L+ PL Q + M Sbjct: 35 GFIWNTIGAPMAEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMN 94 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++ ++ + + K++ Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 95 ALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A + G +P P + V ++ L + Sbjct: 155 FAAQHTEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLS 195 Query: 505 MKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + Q ++ P++ V PA + +YW + I+QQ ++ + Sbjct: 196 LHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIVN--YIVR 253 Query: 564 IGLIDRLRSTFSKNYNS 580 L ++ +KN + Sbjct: 254 PKLRKKVHEELAKNPSK 270 >gi|172036279|ref|YP_001802780.1| putative inner membrane protein translocase component YidC [Cyanothece sp. ATCC 51142] gi|171697733|gb|ACB50714.1| putative 60 kD inner membrane insertion protein [Cyanothece sp. ATCC 51142] Length = 378 Score = 123 bits (308), Expect = 9e-26, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ Q + M+ Q Sbjct: 1 MDFGIGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRFGLYPLSAGQIRNMRKMRITQ 60 Query: 394 PKID----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E++ ++K P + Q+ M +L + NPLAGC P+LLQ+P+ FA++ + Sbjct: 61 PLMKERQAEIQRRYKDDPTK-QQEEMGKLMQEFG-NPLAGCLPLLLQMPILFALFATLR 117 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 43/112 (38%), Gaps = 9/112 (8%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFAL 531 G++ + + S++I ++S + Q I P++F Sbjct: 253 LGQVGVVNDDGTINYDILGMILFFGASIYINQELSGSSGGGAQQQQAINKITPLLFSGMF 312 Query: 532 SSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 FP AG+++Y +NV +Q V+M+ L + L+ + ++ Sbjct: 313 LFFPLPAGVLMYIVVANVFQTLQTLVLMR-----EPLPENLQKLLEEQEKTE 359 >gi|284928889|ref|YP_003421411.1| YidC/Oxa1 family, membrane protein insertase [cyanobacterium UCYN-A] gi|284809348|gb|ADB95053.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain protein [cyanobacterium UCYN-A] Length = 378 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G +I+ T+ ++L +PL+ Q + MK Q Sbjct: 1 MDFGIGFISTNIMLPILDFFYGIVPSYGFSIIALTLVIRLALYPLSAGQIRNMRKMKITQ 60 Query: 394 PKIDELRE----KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E +E ++K + Q+ M +L K NPLAGC P++LQ+P+ FA++ + Sbjct: 61 PLMKERQEEIQRRYKDDSAK-QQEEMGKLMKEFG-NPLAGCLPLVLQMPILFALFATLR 117 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 9/112 (8%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--MILNWMPVVFVFAL 531 G++ + + S+++ ++S Q I P++F Sbjct: 253 LGQVGVMGEDGNINWDILAMILFFGASIYVNQELSGSSGGGQQQQQAITKITPILFSGMF 312 Query: 532 SSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 FP AG+++Y +NV +Q ++M+ L D L+ + + Sbjct: 313 LFFPLPAGVLMYIVVANVFQTLQSLILMR-----EPLPDNLQKLVDEQKKEE 359 >gi|322778978|gb|EFZ09389.1| hypothetical protein SINV_15992 [Solenopsis invicta] Length = 279 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 37/248 (14%) Query: 326 AIPRFEMLIDWGW-FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 P FE L GW I + M NL + + I+ TV + L FPL Sbjct: 20 GEPTFESLGLGGWSPSGIVQNFLEFMHI--NLNMPWWLTIVTATVCARALIFPLVINSQK 77 Query: 385 STANMKNIQPKIDELREKFKQSP-------PQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 + + N P I E+ ++ ++ M+Q K +N++ L+Q Sbjct: 78 NMIKVTNHMPVIQEMHQRLTEARNSGDHMESAKAATEMMQYMKKNNVSMTKNFMAPLIQA 137 Query: 438 PVF----FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 PVF FA+ K+ ++ +E + W+KDL DP I Sbjct: 138 PVFISFFFALKKMANLPVESLKEGGFLWVKDLTVYDPYYI-------------------M 178 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVIS 549 PI+ S++MFI +++ A+ + ++ P + + + FP ++ YW +N +S Sbjct: 179 PIVTSVTMFITIELGTDGANIHAMGMFRYVLRAVPFIALPFMLHFPGTILTYWVATNTVS 238 Query: 550 IVQQAVIM 557 ++Q A + Sbjct: 239 LLQTAFLK 246 >gi|195589346|ref|XP_002084413.1| GD12846 [Drosophila simulans] gi|194196422|gb|EDX09998.1| GD12846 [Drosophila simulans] Length = 414 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 24/198 (12%) Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-------QVLQKAMIQLYKTHN 423 V+ + FPL ++A M N P++ L+ K ++ + M+ + Sbjct: 136 VRTIIFPLVILAQRNSAKMNNNMPQMQMLQLKMTEARQSGNAIESARYAQEMMLFMREKG 195 Query: 424 INPLAGCWPILLQIP----VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 +NPL L Q P F + ++ + +E W DL ADP + L Sbjct: 196 VNPLKNMVVPLAQAPLFISFFMGLRQMANAPVESMRDGGLFWFTDLTMADPYYLLPLITS 255 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 YL + +G +S + +L +P+V +FPA ++ Sbjct: 256 ATLYLT--IEIGTDSARLSAAN-----------MNTMKYVLRALPIVIFPFTMNFPAAIL 302 Query: 540 IYWSWSNVISIVQQAVIM 557 YW+ SN IS+ Q AV+ Sbjct: 303 TYWACSNFISLGQVAVLR 320 >gi|303280353|ref|XP_003059469.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] gi|226459305|gb|EEH56601.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] Length = 240 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 88/228 (38%), Gaps = 23/228 (10%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + ++ YF+ G + AI T +++ FPL Q S M +P++ Sbjct: 10 WITTAGLMYVIEYFHLAHGMEWYAAIAAATCVMRVCAFPLTIMQQKSAGKMHLAKPEMTA 69 Query: 399 LREKFKQSPPQVLQKAMIQL------YKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 L+E ++ + +L + H+++P P+L Q PVF + Y IS E Sbjct: 70 LQESINEARRAGEHERAARLGRVFAIWSKHDVHPAKMLAPLLFQAPVFISFYFAISRMAE 129 Query: 453 MRHA---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + W +DL+ ADPT + L F + Sbjct: 130 GLPSMRDGGFAWFQDLSIADPTFALPIISSLTFLAAVEFAPQNPAV-------------K 176 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + L + V V +SFP+G+ +YW SNV S Q ++ Sbjct: 177 SSQREMTKWGLRALGVAMVPLTASFPSGVFVYWITSNVFSFAQTVLLR 224 >gi|126661516|ref|ZP_01732565.1| putative inner membrane protein translocase component YidC [Cyanothece sp. CCY0110] gi|126617201|gb|EAZ88021.1| putative inner membrane protein translocase component YidC [Cyanothece sp. CCY0110] Length = 378 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ Q + M+ Q Sbjct: 1 MDFGIGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRFGLYPLSAGQIRNMRKMRITQ 60 Query: 394 PKIDE----LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E ++ ++K P + Q+ M +L + NPLAGC P+LLQ+P+ FA++ + Sbjct: 61 PLMKERQADIQRRYKDDPTK-QQEEMGKLMQEFG-NPLAGCLPLLLQMPILFALFATLR 117 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 43/112 (38%), Gaps = 9/112 (8%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFAL 531 G++ + + S++I ++S + Q I P++F Sbjct: 253 LGQVGVVNDDGTINYDILGMILFFGASIYINQELSGSSGGGAQQQQAINKITPLLFSGMF 312 Query: 532 SSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 FP AG+++Y +NV +Q ++M+ L + L+ + ++ Sbjct: 313 LFFPLPAGVLMYIVVANVFQTLQTLILMR-----EPLPENLQKLLEEQEKAE 359 >gi|302753696|ref|XP_002960272.1| hypothetical protein SELMODRAFT_73518 [Selaginella moellendorffii] gi|300171211|gb|EFJ37811.1| hypothetical protein SELMODRAFT_73518 [Selaginella moellendorffii] Length = 315 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 22/218 (10%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-----VLQKA 414 + ++I LTTV V+ + PL Q STA ++P +++++ +Q+ ++ Sbjct: 66 WWLSIALTTVAVRTMVLPLVIYQVKSTARFALLRPDLEKIKVDMEQANYDPVALAENKRK 125 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---WIKDLAAADPT 471 M +L+ H +P LLQ P+F + + E + G W DL D Sbjct: 126 MAELFAKHKTDPFTPLIGALLQGPIFMCFFFGLRTMAEKMDSFKEGGAFWFTDLTTPDEL 185 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 I F + ++ M P K IL M V+F+ Sbjct: 186 YILPFITTATFLITVELNAVD-------------GMQGQPNQKTMKNILRGMGVLFLPLT 232 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI-MKMHGAEIGLID 568 + FP L YW SN+ S++Q A++ K A + + D Sbjct: 233 AQFPKALFCYWVTSNLWSMLQGALLRNKKFKAYLDIPD 270 >gi|297742331|emb|CBI34480.3| unnamed protein product [Vitis vinifera] Length = 443 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 99/236 (41%), Gaps = 27/236 (11%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +F+ + L+ ++ G ++ +I LTT+ ++ + PL Q ST+ + ++P ++ Sbjct: 131 FFLVGILQHLIGGVHSYTGLSWAASIALTTLLIRGMTVPLLVNQLKSTSKLTLMRPHLEA 190 Query: 399 LREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +RE+ + + K M Q++K + + P +++Q PVF + + IS ++ Sbjct: 191 IREEMQAKGMEPSAVAEGNKRMQQIFKEYGVTPFTPLKGLIIQGPVFVSFFLGISNMVQK 250 Query: 454 RHAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + G W DL D I + L F ++++ +Q M Sbjct: 251 VPSFKTGGALWFTDLTTPDSFYIMPILAGLTF-------------LITVEFNMQDGMQGN 297 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI-----VQQAVIMKMHG 561 P + + V +F G+ YW SN+ S+ V+Q + KM G Sbjct: 298 PTAGTMKKFSRALAFLSVPFTMNFAQGIFCYWIPSNLFSLAYGFAVKQPAVKKMFG 353 >gi|307152649|ref|YP_003888033.1| membrane protein insertase, YidC/Oxa1 family [Cyanothece sp. PCC 7822] gi|306982877|gb|ADN14758.1| membrane protein insertase, YidC/Oxa1 family [Cyanothece sp. PCC 7822] Length = 382 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 68/119 (57%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ Q + M+ Q Sbjct: 1 MDFGVGFISTNIMLPILDFFYRIVPSYGFAIIALTLVIRFALYPLSAGQIRNMRKMRITQ 60 Query: 394 PKID----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E+++++K P Q Q+ M ++ + NPLAGC P+LLQ+P+ FA++ + Sbjct: 61 PLMKERQEEIQKRYKNDP-QKQQEEMSKIMQEFG-NPLAGCLPLLLQMPILFALFATLR 117 >gi|134078469|emb|CAK40411.1| unnamed protein product [Aspergillus niger] Length = 518 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 113/281 (40%), Gaps = 35/281 (12%) Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +A+++++ P + + A P Y K L +D+GW + + Sbjct: 108 DPAASDVSLAPQGEVNLNDLTAADINAIPEQIGYLKQLG-------LDFGWG--FSSMIE 158 Query: 348 MLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----PKIDEL-RE 401 + +F+ + G + AI+ T +FV+L ++ + NI+ P E+ + Sbjct: 159 YSVEHFHIMGGLPWWGAIVATGLFVRLGLLYPTLMAADTSTKLNNIKHLTTPLRTEMVQA 218 Query: 402 KFKQS--PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RH 455 +K + + QL+K H I P P+ + IP F Y+V++ + Sbjct: 219 NYKNDLMEATRKRAELSQLHKDHGIKPWKAMIPM-IHIPFGFGCYRVVNNMCSLPVPGLT 277 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 W++DL +DP I L +G + +L + M+ Sbjct: 278 TEHVAWLQDLTVSDPYYILPL-------------IGSVILHHTLKKGGETGMNQMKDSAF 324 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +++ L MP + +++FP L +Y+ ++V ++ Q ++ Sbjct: 325 KSLFLYGMPTISFLFMANFPGALQLYFLTTSVFALGQTYLL 365 >gi|16330836|ref|NP_441564.1| inner membrane protein translocase component YidC [Synechocystis sp. PCC 6803] gi|38502896|sp|P74155|OXAA_SYNY3 RecName: Full=Inner membrane protein oxaA gi|1653329|dbj|BAA18244.1| inner membrane protein [Synechocystis sp. PCC 6803] Length = 384 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 69/119 (57%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +F+ +V ++G AI+ T+ ++L +PL+ Q + M+ Q Sbjct: 1 MDFGIGFISTNIMLPILDFFFGIVHSYGFAIIALTLVIRLGLYPLSAGQIRNMRKMRITQ 60 Query: 394 PKID----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E+++++K P + Q+ M ++ K NPLAGC P+LLQ+P+ FA++ + Sbjct: 61 PLMKERQEEIQKRYKDDPAK-QQEEMAKVMKEFG-NPLAGCLPLLLQMPILFALFATLR 117 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 40/102 (39%), Gaps = 14/102 (13%) Query: 488 MHVGIWPIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFP--AGL 538 + + S+++ ++S P + Q I P++F FP AG+ Sbjct: 267 WDILGMIVFFGFSIYLNQELSGASGGGAPNAQAQQQQTINKITPILFSGMFLFFPLPAGV 326 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 ++Y +NV +Q ++M+ L + L+ + + Sbjct: 327 LMYIVMANVFQTIQTLILMR-----EPLPENLQKLLDEQQKA 363 >gi|306824473|ref|ZP_07457819.1| SpoIIIJ family protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433260|gb|EFM36230.1| SpoIIIJ family protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 312 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 32/254 (12%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ + I PM + YF G FG+AI++ T+ V+L+ PL Q + M Sbjct: 38 GFIWNTIGSPMAEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMN 97 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++ ++ + + K++ Q Q+A+ K + I+ G C+PIL+Q+P F AIY Sbjct: 98 ALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKENGISMFGGVGCFPILIQMPFFSAIY 157 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + + F G ++ P+ I F + +YL + + M Sbjct: 158 FAAQYTDGVSSSTFLG----ISLGSPSMILVAFAGILYYLQSLLSLHGVEDEMQRDQL-- 211 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 ++ P++ V PA + +YW + I+QQ ++ + Sbjct: 212 ------------KKMIYMSPLMIVVFSLFAPASVTLYWVVGGFMMILQQFIVN--YVVRP 257 Query: 565 GLIDRLRSTFSKNY 578 L ++R F+KN Sbjct: 258 KLRQKVREEFAKNP 271 >gi|317032058|ref|XP_001393915.2| hypothetical protein ANI_1_1524084 [Aspergillus niger CBS 513.88] Length = 496 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 113/281 (40%), Gaps = 35/281 (12%) Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +A+++++ P + + A P Y K L +D+GW + + Sbjct: 86 DPAASDVSLAPQGEVNLNDLTAADINAIPEQIGYLKQLG-------LDFGWG--FSSMIE 136 Query: 348 MLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----PKIDEL-RE 401 + +F+ + G + AI+ T +FV+L ++ + NI+ P E+ + Sbjct: 137 YSVEHFHIMGGLPWWGAIVATGLFVRLGLLYPTLMAADTSTKLNNIKHLTTPLRTEMVQA 196 Query: 402 KFKQS--PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RH 455 +K + + QL+K H I P P+ + IP F Y+V++ + Sbjct: 197 NYKNDLMEATRKRAELSQLHKDHGIKPWKAMIPM-IHIPFGFGCYRVVNNMCSLPVPGLT 255 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 W++DL +DP I L +G + +L + M+ Sbjct: 256 TEHVAWLQDLTVSDPYYILPL-------------IGSVILHHTLKKGGETGMNQMKDSAF 302 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +++ L MP + +++FP L +Y+ ++V ++ Q ++ Sbjct: 303 KSLFLYGMPTISFLFMANFPGALQLYFLTTSVFALGQTYLL 343 >gi|113478085|ref|YP_724146.1| putative inner membrane protein translocase component YidC [Trichodesmium erythraeum IMS101] gi|110169133|gb|ABG53673.1| 60 kDa inner membrane insertion protein [Trichodesmium erythraeum IMS101] Length = 382 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 7/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + MK Q Sbjct: 1 MDFGIGFISNNIMLPILDFFYGIVPSYGLAIVALTLVIRASLYPLNAGSIRNMRKMKVTQ 60 Query: 394 PKID----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E+++++K P Q Q+ M +L K NPLAGC P+L Q+P+ FA++ + Sbjct: 61 PLMKKRQEEIQKRYKDDP-QKQQEEMGKLMKE--FNPLAGCLPLLFQMPILFALFATLR 116 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 42/99 (42%), Gaps = 12/99 (12%) Query: 487 FMHVGIWPIIMSLSMFIQMKMS-----PPPADKGQAMILNWMPVVF--VFALSSFPAGLI 539 + I I +S++ +S A+ Q I P++F +F + PAG++ Sbjct: 265 HWDILIMVIGFGVSIYASQTISGKGPGANNANPNQDSINKITPILFSGIFLFTPLPAGVL 324 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 +Y +N+ +Q ++ ++ L + L+ ++ Sbjct: 325 LYMLIANIFQTIQAYIL-----SKEPLPENLQKLVEESQ 358 >gi|311741703|ref|ZP_07715525.1| preprotein translocase YidC subunit [Corynebacterium pseudogenitalium ATCC 33035] gi|311303224|gb|EFQ79305.1| preprotein translocase YidC subunit [Corynebacterium pseudogenitalium ATCC 33035] Length = 325 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 103/284 (36%), Gaps = 66/284 (23%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ L+ + +AI+L T +K L Q S+ M Sbjct: 2 LNFIYWPISAVLWFWHWLLSLVMDPAWGITWILAIVLLTWTLKALMVKPTISQIRSSRKM 61 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS- 448 + IQPK+ E+R K+ + Q M ++YK + P+AGC P+ +QIP+F ++ V+ Sbjct: 62 QEIQPKVQEIRAKYGNDQTKAAQ-EMQKVYKESGVRPMAGCLPVFVQIPMFVGLFHVLRS 120 Query: 449 --ISLEMRHAPFWGWIKDLAAADPTNIFT------------------------------L 476 ++ + ++ D N + Sbjct: 121 FDRTVAVAGGIGHPSGDPMSIEDNANTANYIFKPDLVQQFLDAKIFDVPLVTNLRLNSPI 180 Query: 477 FGILPFYLPGFMHVGIWPIIMSLS-----MFIQMKMSPPPADKGQA-------------- 517 + + V + +I ++ M + + A K QA Sbjct: 181 VEGVTTSQAAVIIVPMIAVIAVMTHFNARMSLNRQEKRRAAGKTQAPQGQNAEMMQQQMA 240 Query: 518 ----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M+L PV+ + +P GL+ Y + V + Q ++ Sbjct: 241 MMSKMMLWVAPVMLILTGFIYPIGLLFYMLANTVWTFFQTRIVY 284 >gi|300780240|ref|ZP_07090096.1| membrane protein OxaA [Corynebacterium genitalium ATCC 33030] gi|300534350|gb|EFK55409.1| membrane protein OxaA [Corynebacterium genitalium ATCC 33030] Length = 389 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 114/291 (39%), Gaps = 51/291 (17%) Query: 342 IAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 P+ +M ++ L+ + + ++I L + V+ L P + S+ M + Sbjct: 5 FVYPVSAVMKLWHWLLADVFNVAPDTAWVLSICLLVLTVRGLLVPSYWSTFRSSRKMLMM 64 Query: 393 QPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447 +P+ L E++ +KA+ +L K + NPL+GC P L+Q+P +Y+++ Sbjct: 65 RPEQIALEERYGASLEPDDITAHEKALKELNKEYGYNPLSGCIPPLVQLPFILGLYRLLI 124 Query: 448 --SISLEMRHAPFWGWI--KDLAAADPTNIFTL------------FGILPFYLPGFMHVG 491 S+ R G + D+A + + F L V Sbjct: 125 WMSVPENGRTGSDIGLLNPDDIAGFLEASFLGVPLPAYVSMSQEQFAALGTTGDDVRAVA 184 Query: 492 IWPIIMSLS-----MFIQMKMSPPPADKGQAM------ILNWM----PVVFVFALSS--F 534 I +I ++ MF+ S D + M ++ W+ PV+ F + Sbjct: 185 IPLLIFAIIFTTFNMFVSQLRSRVHMDWNERMAVRIYDLMWWLMLLIPVMLGFVGMTGLI 244 Query: 535 PAGLIIYWSWSNVISIVQQAVI----MKMHGAEIGLIDRLRSTFSKNYNSQ 581 P L++YW SN+ ++ Q A++ + + E ++ + + N + Sbjct: 245 PIALLMYWFISNLWTLCQTAIMWYLLTRKYPLEPHHLEHVEEARTDAQNKE 295 >gi|104774337|ref|YP_619317.1| hypothetical protein Ldb1491 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514432|ref|YP_813338.1| preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423418|emb|CAI98291.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093747|gb|ABJ58900.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126132|gb|ADY85462.1| Membrane protein oxaA 2 [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 320 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 97/237 (40%), Gaps = 34/237 (14%) Query: 336 WGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYV----STA 387 + W Y +I P+ + + +G G AI++ T+ V+++ PL Q Sbjct: 42 YYWIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLVVRVILMPLMLSQQHKATLQQE 101 Query: 388 NMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M +QP++ L++ K L ++Y +N++ G C P+L+Q+P+ Sbjct: 102 KMHLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPLLIQMPIM 161 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + + F+G + I T+F ++ Sbjct: 162 IGIYQAVAYSNALAKSTFFGISLSSKSMVLAIIATVFALI-------------------Q 202 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ M P K + P++ +F SF L +YW+ N++ ++QQ + Sbjct: 203 SYVAMIGIPEEQKKTMQATMLMNPIMTLFFSMSFSGTLALYWAVGNLVMVIQQLITT 259 >gi|164656152|ref|XP_001729204.1| hypothetical protein MGL_3671 [Malassezia globosa CBS 7966] gi|159103094|gb|EDP41990.1| hypothetical protein MGL_3671 [Malassezia globosa CBS 7966] Length = 474 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 90/234 (38%), Gaps = 22/234 (9%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI--- 416 + I++ T ++L PL ++ + NIQP++ + + + + Q+ M Sbjct: 159 WWATIIVVTCGIRLAIAPLLVYVQANSIRLSNIQPQMQAMIKDLEYAKSTGNQQEMQNAA 218 Query: 417 ----QLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMRHAPFWGWIKDLAAA 468 +L +N +P +Q+P+F + Y ++ L W DL A Sbjct: 219 INVRKLLSDNNCSPFKSLLLPAVQMPIFLSFYFALTGLAKAPLPALTTGGIAWFPDLTLA 278 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + LP ++ + + M+ + +L + V+ Sbjct: 279 DPY----------YALPIISSAMTLLVLETGAETGTTAMNQSSQARFMKNVLRGVTVLAA 328 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI-GLIDRLRSTFSKNYNSQ 581 + +SSFP+ +++YWS +N S+ Q + + L +++ + + Sbjct: 329 WLISSFPSAVLLYWSTTNTFSLFQLLALRTRFLKRLWRLPEKVEHPVKPHIKEK 382 >gi|219111225|ref|XP_002177364.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411899|gb|EEC51827.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 229 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 91/216 (42%), Gaps = 23/216 (10%) Query: 353 FYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK--QSPPQ 409 + G +G +I+ TV ++L FP+ +++ M ++QP++ +++ +++ +P + Sbjct: 4 LHEFSGLEYGWSIVGVTVILRLCLFPVMVASQQTSSRMAHLQPELQQIKARYEALGTPSR 63 Query: 410 VLQK----AMIQLYKTHNINPLAGCWPILLQIPV----FFAIYKVISISLEMRHAPFWGW 461 Q M ++ + + P ++Q+P+ FF + K+ SI E W Sbjct: 64 QDQLQFSGQMKAIFAKYKVKPFRAFAGPVIQMPLFMGMFFGLRKMPSIFPEELSTGGMYW 123 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 DL A+DP I L F + +G QM + Sbjct: 124 FTDLTASDPLYILPFTSALSFL--ALIELGKE----------QMVAQNAQSGHLMVNFFR 171 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M + V +F A ++ YW+ +N +++ Q A++ Sbjct: 172 VMSIGMVPVCVNFEAAMLCYWTSNNFMTLTQTAILK 207 >gi|328706364|ref|XP_001946799.2| PREDICTED: mitochondrial inner membrane protein OXA1L-like [Acyrthosiphon pisum] Length = 423 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 92/248 (37%), Gaps = 24/248 (9%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + + + + G + AI+ T ++LL FPL TA M N P+I +EK Sbjct: 130 LQNALEFMHVSCGLPWWGAIIAGTTILRLLVFPLVVTSQRHTARMNNNMPQIQAYQEKMT 189 Query: 405 QSP-------PQVLQKAMIQLYKTHNINPLAGCWPILLQIPV----FFAIYKVISISLEM 453 ++ + ++ KT+ +NPL G +Q P+ F + + + LE Sbjct: 190 EARLHGNPYEMARASQELMLFMKTNQVNPLKGMILPAIQFPIFLSMFLGLRGMAMLPLES 249 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W D+ D I + ++ + + I + S F Sbjct: 250 FKYGGLWWFTDITLPDQYFILPIVTVVTLGVTLELGADIGKLASSGVGF----------G 299 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 K + +P+V + +FP + +YW+ +N IS+ Q + K+ + Sbjct: 300 KYLKYGVRVLPLVVFPFIVNFPCAVCLYWASTNFISLGQVLFL-KIPSVR-NYFNIEEKR 357 Query: 574 FSKNYNSQ 581 + S+ Sbjct: 358 IVEKPKSK 365 >gi|325473998|gb|EGC77186.1| hypothetical protein HMPREF9353_01536 [Treponema denticola F0402] Length = 894 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 16/211 (7%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP----KIDELREKFK 404 + F N G AI++ ++FV ++ P+ + +Q KI +++ FK Sbjct: 21 FLVAFKIFNENVGGAIVIVSLFVNIVTLPIYAAAEEWQNKERLLQKRLKNKIKDIKAVFK 80 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 ++ A + H + L G + +L QIP F A Y +S L + + ++ + Sbjct: 81 GDERYMILSAYYRQNNYHPLYSLRGMFGLLFQIPFFIAAYHFLS-ELALLQGSGFLFLDN 139 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L D L IL + + PI+M+L + + + + + L M Sbjct: 140 LGKPD-----ALLNILSY------KINFLPILMTLVNLLSVMIYTKNFSIKEKIQLYIMA 188 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++F+F L + P+GL+ YW+ +N+ S+ + Sbjct: 189 IIFLFLLYNSPSGLVFYWTLNNIFSLFKNIF 219 >gi|322375832|ref|ZP_08050343.1| SpoIIIJ family protein [Streptococcus sp. C300] gi|321279100|gb|EFX56142.1| SpoIIIJ family protein [Streptococcus sp. C300] Length = 309 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 105/252 (41%), Gaps = 31/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I PM + YF G FG+AI++ T+ V+L+ PL Q + M + Sbjct: 37 IWNTIGAPMAEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMNAL 96 Query: 393 QPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 + ++ +++ K++ Q Q+A+ K H I+ G C+PIL+Q+P F AIY Sbjct: 97 KHVLEPHQKRLKEATTQEEKLEAQQALWDTQKEHGISVFGGVGCFPILIQMPFFSAIYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G + P+ I F + +YL + + Sbjct: 157 AQYTDGVASSTFLG----INLGSPSMILVAFAGILYYLQSLLSLHG-------------- 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + + ++ P++ V PA + +YW + I+QQ ++ + L Sbjct: 199 VEDEMQREQLKKMIYMSPLMIVVFSFFAPASVTLYWVVGGFMMILQQFIVN--YVVRPKL 256 Query: 567 IDRLRSTFSKNY 578 ++R F+KN Sbjct: 257 RKKVREEFAKNP 268 >gi|225426348|ref|XP_002270313.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 445 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 99/236 (41%), Gaps = 27/236 (11%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +F+ + L+ ++ G ++ +I LTT+ ++ + PL Q ST+ + ++P ++ Sbjct: 131 FFLVGILQHLIGGVHSYTGLSWAASIALTTLLIRGMTVPLLVNQLKSTSKLTLMRPHLEA 190 Query: 399 LREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +RE+ + + K M Q++K + + P +++Q PVF + + IS ++ Sbjct: 191 IREEMQAKGMEPSAVAEGNKRMQQIFKEYGVTPFTPLKGLIIQGPVFVSFFLGISNMVQK 250 Query: 454 RHAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + G W DL D I + L F ++++ +Q M Sbjct: 251 VPSFKTGGALWFTDLTTPDSFYIMPILAGLTF-------------LITVEFNMQDGMQGN 297 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI-----VQQAVIMKMHG 561 P + + V +F G+ YW SN+ S+ V+Q + KM G Sbjct: 298 PTAGTMKKFSRALAFLSVPFTMNFAQGIFCYWIPSNLFSLAYGFAVKQPAVKKMFG 353 >gi|15672551|ref|NP_266725.1| OxaA-like protein precursor [Lactococcus lactis subsp. lactis Il1403] gi|12723459|gb|AAK04667.1|AE006291_1 conserved hypothetical protein [Lactococcus lactis subsp. lactis Il1403] Length = 307 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 32/249 (12%) Query: 341 FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPK 395 F+ +PM + F NL +G I+ T+ ++ L PL Q M + P Sbjct: 35 FLVRPMSAFVDLFANNLHMGYGWGIIFVTLIIRFLILPLGLNQAYKSTYMQEKMAYLAPV 94 Query: 396 IDELREKFKQS----PPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVISI 449 L+E+ K++ Q+A++ K + IN L+ GC P+L+Q P F A+Y + Sbjct: 95 FAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSIGCLPMLIQWPFFIALYNAAAY 154 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + + F+G +P P + V I ++ + +I Sbjct: 155 TTGISSSTFYG-------------------IPLGHPSVVLVIISGVLYFIQTWISTLSMT 195 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P K +L P + V PAG+ +YW+ + ++ I+ + + R Sbjct: 196 PEQKKSGMAMLIMSPAMIVVFSFMSPAGVALYWAVGGFVIVI--QQIIITFIMKPRMRRR 253 Query: 570 LRSTFSKNY 578 + F+KN Sbjct: 254 IDEEFTKNP 262 >gi|281491036|ref|YP_003353016.1| OxaA/YidC family membrane protein [Lactococcus lactis subsp. lactis KF147] gi|38503174|sp|Q9CHZ9|OXAA2_LACLA RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|281374794|gb|ADA64314.1| Membrane protein, OxaA/YidC family [Lactococcus lactis subsp. lactis KF147] gi|326406070|gb|ADZ63141.1| OxaA/YidC family membrane protein [Lactococcus lactis subsp. lactis CV56] Length = 320 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 32/249 (12%) Query: 341 FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQ----YVSTANMKNIQPK 395 F+ +PM + F NL +G I+ T+ ++ L PL Q M + P Sbjct: 48 FLVRPMSAFVDLFANNLHMGYGWGIIFVTLIIRFLILPLGLNQAYKSTYMQEKMAYLAPV 107 Query: 396 IDELREKFKQS----PPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVISI 449 L+E+ K++ Q+A++ K + IN L+ GC P+L+Q P F A+Y + Sbjct: 108 FAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSIGCLPMLIQWPFFIALYNAAAY 167 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + + F+G +P P + V I ++ + +I Sbjct: 168 TTGISSSTFYG-------------------IPLGHPSVVLVIISGVLYFIQTWISTLSMT 208 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P K +L P + V PAG+ +YW+ + ++ I+ + + R Sbjct: 209 PEQKKSGMAMLIMSPAMIVVFSFMSPAGVALYWAVGGFVIVI--QQIIITFIMKPRMRRR 266 Query: 570 LRSTFSKNY 578 + F+KN Sbjct: 267 IDEEFTKNP 275 >gi|315653630|ref|ZP_07906550.1| membrane protein OxaA [Lactobacillus iners ATCC 55195] gi|315488992|gb|EFU78634.1| membrane protein OxaA [Lactobacillus iners ATCC 55195] Length = 319 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 113/262 (43%), Gaps = 33/262 (12%) Query: 332 MLIDWGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ++ + W Y P+ +M + NL+G G AI++ T ++L+ PL Sbjct: 34 LVGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMI 93 Query: 388 NMKN----IQPKIDELREKFKQSPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPV 439 + +QP++ ++ K++ + +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 94 KQQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPI 153 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 IY+ ++ S + A F G ++ + P+ +F + + + + G++ + Sbjct: 154 MIGIYQAVAYSKTLASASFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI------ 203 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + + + P++ + + L +Y+ ++ ++QQ + + Sbjct: 204 ---------SEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIATFI 254 Query: 560 HGAEIGLIDRLRSTFSKNYNSQ 581 ++ + +KN + Sbjct: 255 LMPKV--RADVDKELTKNPIKE 274 >gi|332709872|ref|ZP_08429828.1| YidC/Oxa1 family membrane protein insertase [Lyngbya majuscula 3L] gi|332351243|gb|EGJ30827.1| YidC/Oxa1 family membrane protein insertase [Lyngbya majuscula 3L] Length = 389 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ FPL + MK Q Sbjct: 1 MDFGIGFISNNIMLPILDFFYGIVPSYGLAIIALTLVIRFALFPLNAGSIRNMRRMKVTQ 60 Query: 394 PKIDE----LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + + ++E++K P + Q+ M +L++ NPLAGC P+L+Q+PV FA++ + Sbjct: 61 PLMKKEQEAIKERYKDDPAK-QQEEMSKLFQKFG-NPLAGCLPLLVQMPVLFALFATLR 117 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 39/112 (34%), Gaps = 9/112 (8%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK-----GQAMILNWMPVVFV 528 G + + +S+++ +S A Q + PV+F Sbjct: 253 LGRVGAFDDDGTIHWDIVGMILFFGISLYVNQLLSGSGAGSGQAGDQQKAVNQITPVLFS 312 Query: 529 FALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAE--IGLIDRLRSTFSK 576 FP AG+++Y +N+ +Q ++ + E ++++ + Sbjct: 313 GMFLFFPLPAGVLMYIVVANIFQTIQTFILSREPLPENLQEIVEQQEKEAKR 364 >gi|312871831|ref|ZP_07731919.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 3008A-a] gi|311092773|gb|EFQ51129.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 3008A-a] Length = 319 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 113/258 (43%), Gaps = 37/258 (14%) Query: 332 MLIDWGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ++ + W Y P+ +M + NL+G G AI++ T ++L+ PL Sbjct: 34 LVGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMI 93 Query: 388 NMKN----IQPKIDELREKFKQSPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPV 439 + +QP++ ++ K++ + +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 94 KQQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPI 153 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 IY+ ++ S + A F G ++ + P+ +F + + + + G++ + Sbjct: 154 MIGIYQAVAYSKTLASASFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI------ 203 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + + + P++ + + L +Y+ ++ ++QQ + Sbjct: 204 ---------SEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLI---- 250 Query: 560 HGAEIGLIDRLRSTFSKN 577 A L+ ++RS K Sbjct: 251 --ATFILMPKVRSDVDKE 266 >gi|309806133|ref|ZP_07700152.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 03V1-b] gi|309808392|ref|ZP_07702292.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 01V1-a] gi|308167488|gb|EFO69648.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 03V1-b] gi|308168360|gb|EFO70478.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 01V1-a] Length = 319 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 113/258 (43%), Gaps = 37/258 (14%) Query: 332 MLIDWGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ++ + W Y P+ +M + NL+G G AI++ T ++L+ PL Sbjct: 34 LVGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMI 93 Query: 388 NMKN----IQPKIDELREKFKQSPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPV 439 + +QP++ ++ K++ + +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 94 KQQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPI 153 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 IY+ ++ S + + F G ++ + P+ +F + + + + G++ + Sbjct: 154 MIGIYQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI------ 203 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + + + P++ + + L +Y+ ++ ++QQ + Sbjct: 204 ---------SEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLI---- 250 Query: 560 HGAEIGLIDRLRSTFSKN 577 A L+ ++R+ K Sbjct: 251 --ATFILMPKVRADVDKE 266 >gi|222624078|gb|EEE58210.1| hypothetical protein OsJ_09169 [Oryza sativa Japonica Group] Length = 407 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 96/243 (39%), Gaps = 43/243 (17%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ ++L G N+ I LT++ ++ L PL Q +T + ++P+I+ + + + Sbjct: 109 LQHLIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQMKATVKLNAMRPEIEAINLEMR 168 Query: 405 -----------------------QSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIP 438 + PQ + ++ + +L+ H + PL + +Q P Sbjct: 169 TISSTRIAGNEKSSTRVTDEGSMSTDPQSMLEGKRKLGELFLRHGVTPLTPLKGLFIQAP 228 Query: 439 VFFAIYKVISISLEMRHAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 +F + + IS +E + G W DL D I + L F Sbjct: 229 IFMSFFFAISNMVEKVPSFKGGGIYWFTDLTTPDELLILPMLTSLTF------------- 275 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++++ + +Q M P K M V+ + SFP + YW SN+ S+ V Sbjct: 276 LVTVELNMQDGMEGNPMLKTMKNFSRVMAVLTIPFTMSFPKAIFFYWVTSNLFSLGYGFV 335 Query: 556 IMK 558 + K Sbjct: 336 LRK 338 >gi|283768633|ref|ZP_06341545.1| membrane protein insertase, YidC/Oxa1 family [Bulleidia extructa W1219] gi|283105025|gb|EFC06397.1| membrane protein insertase, YidC/Oxa1 family [Bulleidia extructa W1219] Length = 303 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 100/251 (39%), Gaps = 20/251 (7%) Query: 338 WFY-FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 WF P+ L+++ ++G G AI L T+ + L K V+ M+ IQP++ Sbjct: 54 WFSAIFVWPLAWLINHLSMIIG-VGGAIALVTIVIHALLAAFTSKSQVAMQRMQLIQPEL 112 Query: 397 DELREKFK----QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 ++++ K++ S + + L K ++++P + LQ P+ A++ I + Sbjct: 113 NKIQRKYEGVSTDSARMKMVQEQQALMKKYDVHPGSMMLVQFLQFPIVMAMFFAIQRAES 172 Query: 453 MRHAPFWGWIKDLAAAD--PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + F G I + I L + + + +G ++ L + +Q K + Sbjct: 173 VAKGSFLGMILQVTPMKGLQQLIAGNMASLSYIILFILMLGSQFALIKLPLILQKKKAEA 232 Query: 511 ------------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q M+ M + ++ +G+ YW N++ IV+ ++ K Sbjct: 233 EAKKHHRRPEEVGGGSQQVMMQYMMVGMIAIFGFTWFSGMSYYWFIRNIVDIVKTLIVQK 292 Query: 559 MHGAEIGLIDR 569 + + R Sbjct: 293 KIDEQKPVGGR 303 >gi|298490101|ref|YP_003720278.1| YidC/Oxa1 family lipolytic protein ['Nostoc azollae' 0708] gi|298232019|gb|ADI63155.1| membrane protein insertase, YidC/Oxa1 family ['Nostoc azollae' 0708] Length = 383 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY ++G+AI+ T+ ++ +PL+ S M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYGFFPSYGLAIVALTLIIRFALYPLSAGSIRSMRRMRVVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P ++ E++E++K P Q Q+ M+ + K NPLAGC P+LLQ+PV A++ + Sbjct: 61 PVMQRRMAEIKERYKDDP-QKQQEEMVNVQKEFG-NPLAGCLPLLLQMPVLLALFATLR 117 Score = 57.3 bits (137), Expect = 7e-06, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 5/82 (6%) Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFP--AGLIIY 541 + + +S+++ +S + + Q + PV+F FP AG+++Y Sbjct: 266 HWDIVAMIVFFGISLYVSQMLSGQNSSGGNPQQDTVNKITPVIFSGMFLFFPLPAGVLMY 325 Query: 542 WSWSNVISIVQQAVIMKMHGAE 563 N+ +Q ++ + E Sbjct: 326 MVIGNIFQTLQTYILSREPLPE 347 >gi|309803185|ref|ZP_07697282.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 11V1-d] gi|308164693|gb|EFO66943.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 11V1-d] Length = 308 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 113/258 (43%), Gaps = 37/258 (14%) Query: 332 MLIDWGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ++ + W Y P+ +M + NL+G G AI++ T ++L+ PL Sbjct: 23 LVGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMI 82 Query: 388 NMKN----IQPKIDELREKFKQSPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPV 439 + +QP++ ++ K++ + +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 83 KQQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPI 142 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 IY+ ++ S + + F G ++ + P+ +F + + + + G++ + Sbjct: 143 MIGIYQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI------ 192 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + + + P++ + + L +Y+ ++ ++QQ + Sbjct: 193 ---------SEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLI---- 239 Query: 560 HGAEIGLIDRLRSTFSKN 577 A L+ ++R+ K Sbjct: 240 --ATFILMPKVRADVDKE 255 >gi|259500535|ref|ZP_05743437.1| membrane protein OxaA [Lactobacillus iners DSM 13335] gi|302191225|ref|ZP_07267479.1| preprotein translocase subunit YidC [Lactobacillus iners AB-1] gi|309810155|ref|ZP_07704000.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners SPIN 2503V10-D] gi|259167919|gb|EEW52414.1| membrane protein OxaA [Lactobacillus iners DSM 13335] gi|308169427|gb|EFO71475.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners SPIN 2503V10-D] Length = 319 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 113/258 (43%), Gaps = 37/258 (14%) Query: 332 MLIDWGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ++ + W Y P+ +M + NL+G G AI++ T ++L+ PL Sbjct: 34 LVGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMI 93 Query: 388 NMKN----IQPKIDELREKFKQSPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPV 439 + +QP++ ++ K++ + +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 94 KQQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPI 153 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 IY+ ++ S + + F G ++ + P+ +F + + + + G++ + Sbjct: 154 MIGIYQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI------ 203 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + + + P++ + + L +Y+ ++ ++QQ + Sbjct: 204 ---------SEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLI---- 250 Query: 560 HGAEIGLIDRLRSTFSKN 577 A L+ ++R+ K Sbjct: 251 --ATFILMPKVRADVDKE 266 >gi|220910606|ref|YP_002485917.1| inner membrane protein translocase component YidC [Cyanothece sp. PCC 7425] gi|219867217|gb|ACL47556.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 7425] Length = 396 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 41/119 (34%), Positives = 73/119 (61%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++L +PL+ + MK +Q Sbjct: 1 MDFGIGFLSDNVMLPILDFFYGIVPSYGLAIVALTLVIRLALYPLSAGSIRNMRQMKIVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P K+ E++EK+K P Q+AM ++YK NPLAGC+P+LLQ+P+ FA++ + Sbjct: 61 PMMQKKVKEIQEKYKNDPT-GQQQAMSEVYKEFG-NPLAGCFPLLLQMPILFALFATLR 117 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 53/146 (36%), Gaps = 17/146 (11%) Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A K ++ H A D + F I + V I + +S Sbjct: 241 IASDKGFLFIDKLGHVGAIDNDLFTTAPDGSKQFNFGAI-------HLDVLIMILGFGVS 293 Query: 501 MFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAV 555 ++I +S + + Q + P++F FP AG+++Y +N+ +Q + Sbjct: 294 LYINQILSGQGSTSNNPQQNTVNQMTPIIFSGMFLFFPLPAGVLLYMLIANIFQTLQTFL 353 Query: 556 IMKMHGAEIGLIDRLRSTFSKNYNSQ 581 I+K L + +R + ++ Sbjct: 354 ILK-----EPLPENIRKLAEEETKAE 374 >gi|329920138|ref|ZP_08276969.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners SPIN 1401G] gi|328936592|gb|EGG33036.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners SPIN 1401G] Length = 319 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 113/262 (43%), Gaps = 33/262 (12%) Query: 332 MLIDWGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ++ + W Y P+ +M + NL+G G AI++ T ++L+ PL Sbjct: 34 LVGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMI 93 Query: 388 NMKN----IQPKIDELREKFKQSPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPV 439 + +QP++ ++ K++ + +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 94 KQQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPI 153 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 IY+ ++ S + + F G ++ + P+ +F + + + + G++ + Sbjct: 154 MIGIYQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI------ 203 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + + + P++ + + L +Y+ ++ ++QQ + + Sbjct: 204 ---------SEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIATFI 254 Query: 560 HGAEIGLIDRLRSTFSKNYNSQ 581 ++ + +KN + Sbjct: 255 LMPKV--RADVDKELTKNPIKE 274 >gi|312875598|ref|ZP_07735599.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2053A-b] gi|311088852|gb|EFQ47295.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2053A-b] Length = 319 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 113/262 (43%), Gaps = 33/262 (12%) Query: 332 MLIDWGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ++ + W Y P+ +M + NL+G G AI++ T ++L+ PL Sbjct: 34 LVGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMI 93 Query: 388 NMKN----IQPKIDELREKFKQSPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPV 439 + +QP++ ++ K++ + +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 94 KQQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPI 153 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 IY+ ++ S + + F G ++ + P+ +F + + + + G++ + Sbjct: 154 MIGIYQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI------ 203 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + + + P++ + + L +Y+ ++ ++QQ + + Sbjct: 204 ---------SEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIATFI 254 Query: 560 HGAEIGLIDRLRSTFSKNYNSQ 581 ++ + +KN + Sbjct: 255 LMPKV--RADVDKELTKNPIKE 274 >gi|226467554|emb|CAX69653.1| preprotein translocase YidC subunit [Schistosoma japonicum] Length = 367 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 113/294 (38%), Gaps = 41/294 (13%) Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 K LS S + ILP + + L A PT+ + P Sbjct: 19 KLLSVRKFSNSVYLSTSTNCILPEPPLPPSKELILNALGEPTLSSLGLNSYWP------- 71 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGW+ ML + +L + AI TT+ ++L FP+ +Q AN + P+ Sbjct: 72 WGWY------QCMLETLHVHLELPWWGAIAATTIAIRLCVFPIIIRQRRHLANFTDNMPQ 125 Query: 396 IDELREKFKQSP-------PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 L+E+ ++ + M +L K +++NPL + LQ+P+F +++ I Sbjct: 126 FTILQERMTRARLSGNYIEVMRASQEMNELMKNNDLNPLKSLKYMFLQVPIFLSVFTGIR 185 Query: 449 ISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + + W DL A+DP I + L F Sbjct: 186 GLVNLPVTSMQSGGIAWFTDLTASDPYYILPFLSMSTLLLV----------------FET 229 Query: 505 MKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +P P ++ P++ + + P+ L+ YW+ SN++S +Q ++ Sbjct: 230 GAETPSPHIQPVVRTVMRVFPIIGFVFVVNMPSALVWYWTVSNMLSFLQSLILR 283 >gi|58037139|ref|NP_081212.1| mitochondrial inner membrane protein OXA1L precursor [Mus musculus] gi|38372481|sp|Q8BGA9|OXA1L_MOUSE RecName: Full=Mitochondrial inner membrane protein OXA1L; AltName: Full=Oxidase assembly 1-like protein; Short=OXA1-like protein; Flags: Precursor gi|26336841|dbj|BAC32104.1| unnamed protein product [Mus musculus] gi|26342657|dbj|BAC34985.1| unnamed protein product [Mus musculus] Length = 433 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ Y + +L + AI TV + L FPL K A + N P++ + + + Sbjct: 120 IQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIR 179 Query: 405 QSPPQVLQKA-------MIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ Q M + K H+I L L Q PVF A+ ++ ++ + Sbjct: 180 EAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVPS 239 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP + P++++ +M+ +++ Sbjct: 240 LQTGGLWWFQDLTVSDPIYVL-------------------PLVVTATMWCVLELGAETGV 280 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 281 QSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|148704413|gb|EDL36360.1| oxidase assembly 1-like, isoform CRA_d [Mus musculus] Length = 433 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ Y + +L + AI TV + L FPL K A + N P++ + + + Sbjct: 120 IQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIR 179 Query: 405 QSPPQVLQKA-------MIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ Q M + K H+I L L Q PVF A+ ++ ++ + Sbjct: 180 EAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVPS 239 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP + P++++ +M+ +++ Sbjct: 240 LQTGGLWWFQDLTVSDPIYVL-------------------PLVVTATMWCVLELGAETGV 280 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 281 QSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|331265654|ref|YP_004325284.1| Preprotein translocase subunit YidC2 [Streptococcus oralis Uo5] gi|326682326|emb|CBY99943.1| Preprotein translocase subunit YidC2 [Streptococcus oralis Uo5] Length = 309 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 105/252 (41%), Gaps = 31/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I PM + YF G FG+AI++ T+ V+L+ PL Q + M + Sbjct: 37 IWNTIGAPMAEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMNAL 96 Query: 393 QPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 + ++ +++ K++ Q Q+A+ K H I+ G C+PIL+Q+P F AIY Sbjct: 97 KHVLEPHQKRLKEATTQEEKLEAQQALWDTQKEHGISVFGGVGCFPILIQMPFFSAIYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G + P+ + F + +YL + + Sbjct: 157 AQYTDGVASSTFLG----INLGSPSLLLVAFAGILYYLQSLLSLHG-------------- 198 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + + ++ P++ V PA + +YW + I+QQ ++ + L Sbjct: 199 VEDEMQREQLKKMIYMSPLMIVVFSFFAPASVTLYWVVGGFMMILQQFIVN--YVVRPKL 256 Query: 567 IDRLRSTFSKNY 578 ++R F+KN Sbjct: 257 RKKVREEFAKNP 268 >gi|218248781|ref|YP_002374152.1| putative inner membrane protein translocase component YidC [Cyanothece sp. PCC 8801] gi|257061840|ref|YP_003139728.1| inner membrane protein translocase component YidC [Cyanothece sp. PCC 8802] gi|218169259|gb|ACK67996.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 8801] gi|256592006|gb|ACV02893.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 8802] Length = 379 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 67/119 (56%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ Q + MK Q Sbjct: 1 MDFGVGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRFGLYPLSAGQIRNMRKMKITQ 60 Query: 394 PKIDELRE----KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E +E ++K P + Q+ M +L + NPLAGC P+LLQ+P+ FA++ + Sbjct: 61 PLMKERQEEIQRRYKDDPAK-QQEEMGKLMQEFG-NPLAGCLPLLLQMPILFALFATLR 117 Score = 59.6 bits (143), Expect = 2e-06, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 45/113 (39%), Gaps = 10/113 (8%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPVVFVFA 530 G++ + + LS+++ ++S + + Q + PV+F Sbjct: 253 LGQVGVVDDDGSINWDILGMILFFGLSIYLNQELSGASGGGSAQQQQAVNKITPVIFSGM 312 Query: 531 LSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 FP AG+++Y +NV +Q ++M+ L + L+ + ++ Sbjct: 313 FLFFPLPAGVLMYIVVANVFQTLQTVILMR-----EPLPENLQKLVEQQEKAE 360 >gi|227500990|ref|ZP_03931039.1| sporulation associated-membrane protein [Anaerococcus tetradius ATCC 35098] gi|227216763|gb|EEI82161.1| sporulation associated-membrane protein [Anaerococcus tetradius ATCC 35098] Length = 244 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 105/240 (43%), Gaps = 18/240 (7%) Query: 342 IAKPMFMLMSYFYNL----------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +A + LM + Y+ + + IAI++ T+ V LL P+ Q K Sbjct: 5 LAGILGQLMRWIYDSLQANFTEPTNISFYAIAIIIMTLLVSLLIIPMTVSQQKQAERTKI 64 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-LAGCWPILLQIPVFFAIYKVISIS 450 +PK++E+++K+ + +K LYK + P ++GC +++QI + F +++++ + Sbjct: 65 FKPKMEEIQKKYSYDQQIMQKKMQQ-LYKEEGVTPGISGCLVMIIQIMILFGLFRMMGDT 123 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL-SMFIQMKMSP 509 + + D + I L P++ + + + + L SM +M Sbjct: 124 TKY----VFPEGLDNVRTNFYWISNLLDKDPYWFALPLLTSLSQVAVQLFSMKTNPQMQQ 179 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM-KMHGAEIGLID 568 A + MP+++ F PAGL +Y++ S+V +V ++ M + L D Sbjct: 180 GGAMGNMNNMFLIMPLMYFFIFRGLPAGLPLYYTLSSVFRLVIMVIMHFYMKANKTELED 239 >gi|224477076|ref|YP_002634682.1| hypothetical protein Sca_1592 [Staphylococcus carnosus subsp. carnosus TM300] gi|229462937|sp|Q9RGS4|OXAA_STACT RecName: Full=Membrane protein oxaA; Flags: Precursor gi|222421683|emb|CAL28497.1| conserved hypothetical protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 289 Score = 120 bits (300), Expect = 7e-25, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 108/244 (44%), Gaps = 33/244 (13%) Query: 337 GWFY-FIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMK 390 G+FY K M ++ + + ++G+AI++ + ++++ P Y ++ M Sbjct: 30 GFFYNTFVKNMDNIIHWLGASFNNDYGLAIIVLVLAIRIIVLPFMLSNYKNSHMMREKMI 89 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAI 443 +P +D ++EK +++ Q + M+++YK +++NP+ GC P+L+Q+P+ + Sbjct: 90 IAKPDMDAVKEKVQRARTQEDKMAANQEMMEVYKKYDMNPMQSMLGCLPMLIQMPIIMGL 149 Query: 444 YKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 + V+ + + W +LA D I + G+L F L Sbjct: 150 FFVLKYPSPGGITEHSHFLWF-NLAKPD-IWITVIAGVLYF----------------LQA 191 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ PP + M++ P++ ++ S A L +YWS S IVQ + + Sbjct: 192 YVSTFSMPPEQKQMSYMMMIISPIMIIWVSLSSAAALGLYWSVSAAFLIVQTYIANAYYS 251 Query: 562 AEIG 565 + Sbjct: 252 KKAK 255 >gi|167957213|ref|ZP_02544287.1| 60 kDa inner membrane insertion protein [candidate division TM7 single-cell isolate TM7c] Length = 307 Score = 120 bits (300), Expect = 7e-25, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 105/236 (44%), Gaps = 43/236 (18%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + FI +P+ L+ Y+L+ +FGI+I++ T+ V+LL +PL KKQ M+ +QP++ Sbjct: 4 FDEFIVRPILNLLMAIYSLIPDFGISIIVFTILVRLLLWPLIKKQLHQAKAMRKMQPELA 63 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ++++++ ++P Q+ AM++LYK HNI+ +++Q+P+ A+Y+V+ I + R A Sbjct: 64 KIKKQYAKNP-QMRNLAMMELYKKHNISAFGSIGVLIIQLPILIAMYRVVQIFVSSR-AD 121 Query: 458 FWGWIKDLAAADPT-------------NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 ++ D P N + + + + ++ ++ ++Q Sbjct: 122 LGKYVYDFVKNLPVANNLVNNPDQFNQNFLGIIDLTQHAVSKDGVIIGLLVLAGVAAYLQ 181 Query: 505 ---MKMSPPPADK-------------------------GQAMILNWMPVVFVFALS 532 K P +D ++ +MP++ Sbjct: 182 YLTSKQLSPQSDSKRKLRDILAEAGGGKEADQSEVNAIMTRKMMKFMPIMMFMVTI 237 >gi|300859432|ref|YP_003784415.1| hypothetical protein cpfrc_02015 [Corynebacterium pseudotuberculosis FRC41] gi|300686886|gb|ADK29808.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] Length = 406 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 112/290 (38%), Gaps = 58/290 (20%) Query: 341 FIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 P+ +M ++ + N + +++ + V+ + P Q S Sbjct: 10 IFIYPVSGVMKLWHLFLANMLGVPASLAWALSLFALVITVRGIVAPFTWIQLKSGRAGIL 69 Query: 392 IQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++PK+ L+E++++ + Q+ +L+K + + +GC P L+QIPVF +Y+V+ Sbjct: 70 MRPKLKRLQEEYEEKTDKESILEYQQKQKELHKEYGYSVKSGCVPALIQIPVFLGLYQVL 129 Query: 448 ---SISLEMRHAPFWGWIKDLAAADPTNIF------------------TLFGILPFYLPG 486 + +E A I L++ D + + Y Sbjct: 130 LRMARPVEGLDANNHAPIGLLSSDDVSAFLESRVSDVPLPAYNAMSAEQFARLNTTYDAV 189 Query: 487 FMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMILNWMPVVFVFAL--------- 531 V I + I + +S D G A+ LN + ++ +F Sbjct: 190 HAFVTPLIIAACVFTVINLIISVVRNNYSVDHDSGLAVQLNRLLIIMIFFTPLMLISLGL 249 Query: 532 -SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 S PA + +YW +N+ +++Q A++ L+ R++ F K + + Sbjct: 250 RSPIPAAICMYWVANNLWTLIQNALMY--------LVLRIKYPFDKEHQA 291 >gi|302207109|gb|ADL11451.1| Preprotein translocase subunit YidC [Corynebacterium pseudotuberculosis C231] gi|308277364|gb|ADO27263.1| Preprotein translocase subunit YidC [Corynebacterium pseudotuberculosis I19] Length = 415 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 112/290 (38%), Gaps = 58/290 (20%) Query: 341 FIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 P+ +M ++ + N + +++ + V+ + P Q S Sbjct: 19 IFIYPVSGVMKLWHLFLANMLGVPASLAWALSLFALVITVRGIVAPFTWIQLKSGRAGIL 78 Query: 392 IQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++PK+ L+E++++ + Q+ +L+K + + +GC P L+QIPVF +Y+V+ Sbjct: 79 MRPKLKRLQEEYEEKTDKESILEYQQKQKELHKEYGYSVKSGCVPALIQIPVFLGLYQVL 138 Query: 448 ---SISLEMRHAPFWGWIKDLAAADPTNIF------------------TLFGILPFYLPG 486 + +E A I L++ D + + Y Sbjct: 139 LRMARPVEGLDANNHAPIGLLSSDDVSAFLESRVSDVPLPAYNAMSAEQFARLNTTYDAV 198 Query: 487 FMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMILNWMPVVFVFAL--------- 531 V I + I + +S D G A+ LN + ++ +F Sbjct: 199 HAFVTPLIIAACVFTVINLIISVVRNNYSVDHDSGLAVQLNRLLIIMIFFTPLMLISLGL 258 Query: 532 -SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 S PA + +YW +N+ +++Q A++ L+ R++ F K + + Sbjct: 259 RSPIPAAICMYWVANNLWTLIQNALMY--------LVLRIKYPFDKEHQA 300 >gi|325912104|ref|ZP_08174502.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners UPII 143-D] gi|325476054|gb|EGC79222.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners UPII 143-D] Length = 319 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 113/262 (43%), Gaps = 33/262 (12%) Query: 332 MLIDWGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ++ + W Y P+ +M + NL+G G AI++ T ++L+ PL Sbjct: 34 LVGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMI 93 Query: 388 NMKN----IQPKIDELREKFKQSPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPV 439 + +QP++ ++ K++ + +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 94 KQQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPI 153 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 IY+ ++ S + + F G ++ + P+ +F + + + + G++ + Sbjct: 154 MMGIYQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI------ 203 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + + + P++ + + L +Y+ ++ ++QQ + + Sbjct: 204 ---------SEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIATFI 254 Query: 560 HGAEIGLIDRLRSTFSKNYNSQ 581 ++ + +KN + Sbjct: 255 LMPKV--RADVDKELTKNPIKE 274 >gi|26346514|dbj|BAC36908.1| unnamed protein product [Mus musculus] Length = 433 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ Y + +L + AI TV + L FPL K A + N P++ + + + Sbjct: 120 IQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIR 179 Query: 405 QSPPQVLQKA-------MIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ Q M + K H+I L L Q PVF A+ ++ ++ + Sbjct: 180 EAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVPS 239 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP + P++++ +M+ +++ Sbjct: 240 LQTGGLWWFQDLTVSDPIYVL-------------------PLVVTATMWCVLELDAETGV 280 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 281 QSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|22298143|ref|NP_681390.1| putative inner membrane protein translocase component YidC [Thermosynechococcus elongatus BP-1] gi|38503003|sp|Q8DL96|OXAA_THEEB RecName: Full=Inner membrane protein oxaA gi|22294322|dbj|BAC08152.1| tll0600 [Thermosynechococcus elongatus BP-1] Length = 401 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 39/119 (32%), Positives = 74/119 (62%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ V+ +PL+ + MK +Q Sbjct: 1 MDFGIGFLSNNVMLPILDFFYGIVPSYGLAIVALTLVVRFAVYPLSAGSIRNMRRMKVVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P ++ E+++K+K +P + QKAM ++Y+ NPLAGC+P+LLQ+P+ FA++ + Sbjct: 61 PIMQKRMQEIQQKYKDNPAE-QQKAMAEVYREFG-NPLAGCFPLLLQLPILFALFATLR 117 Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 53/146 (36%), Gaps = 15/146 (10%) Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSL 499 V + + +I L + LF LP + + + + + Sbjct: 232 VQGTIPGIAADKGFLFISALGHVGVIDQGELFITLPDGARQFNWGAIHWDILVMILGFGV 291 Query: 500 SMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAV 555 S+++ +S + + Q + P++F FP AG+++Y +N+ VQ + Sbjct: 292 SLYVNQLLSGQGSSNNPQQQTVNQLTPIIFSGMFLFFPLPAGVLLYMLIANIFQTVQTFI 351 Query: 556 IMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + L + L+ + ++ Sbjct: 352 LQR-----EPLPENLQKLVEEQERAE 372 >gi|312874173|ref|ZP_07734207.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2052A-d] gi|311090243|gb|EFQ48653.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2052A-d] Length = 319 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 113/258 (43%), Gaps = 37/258 (14%) Query: 332 MLIDWGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ++ + W Y P+ +M + NL+G G AI++ T ++L+ PL Sbjct: 34 LVGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMI 93 Query: 388 NMKN----IQPKIDELREKFKQSPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPV 439 + +QP++ ++ K++ + +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 94 KQQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPI 153 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 IY+ ++ S + + F G ++ + P+ +F + + + + G++ + Sbjct: 154 MMGIYQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI------ 203 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + + + P++ + + L +Y+ ++ ++QQ + Sbjct: 204 ---------SEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLI---- 250 Query: 560 HGAEIGLIDRLRSTFSKN 577 A L+ ++R+ K Sbjct: 251 --ATFILMPKVRADVDKE 266 >gi|325912572|ref|ZP_08174955.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners UPII 60-B] gi|325477993|gb|EGC81122.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners UPII 60-B] Length = 319 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 113/258 (43%), Gaps = 37/258 (14%) Query: 332 MLIDWGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ++ + W Y P+ +M + NL+G G AI++ T ++L+ PL Sbjct: 34 LVGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMI 93 Query: 388 NMKN----IQPKIDELREKFKQSPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPV 439 + +QP++ ++ K++ + +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 94 KQQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPI 153 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 IY+ ++ S + + F G ++ + P+ +F + + + + G++ + Sbjct: 154 MMGIYQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI------ 203 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + + + P++ + + L +Y+ ++ ++QQ + Sbjct: 204 ---------SEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLI---- 250 Query: 560 HGAEIGLIDRLRSTFSKN 577 A L+ ++R+ K Sbjct: 251 --ATFILMPKVRADVDKE 266 >gi|307702984|ref|ZP_07639931.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037] gi|307623377|gb|EFO02367.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037] Length = 309 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 31/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I PM + YF G FG+AI++ T+ V+L+ PL Q + M + Sbjct: 37 IWNTIGAPMAEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMNAL 96 Query: 393 QPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 + ++ + + K++ Q Q+A+ K H I+ G C+PIL+Q+P F AIY Sbjct: 97 KHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILIQMPFFSAIYFA 156 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G DL + P+ + F + +YL + + M Sbjct: 157 AQYTDGVASSTFLGI--DLGS--PSLLLVAFAGILYYLQSLLSLHGVEDEMQRDQL---- 208 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 ++ P++ V PA + +YW + I+QQ ++ + L Sbjct: 209 ----------KRMIYVSPLMIVVFSFFAPASVTLYWVVGGFMMILQQFIVN--YVVRPKL 256 Query: 567 IDRLRSTFSKNY 578 ++R F+KN Sbjct: 257 RKKVREEFAKNP 268 >gi|74228374|dbj|BAE24033.1| unnamed protein product [Mus musculus] Length = 433 Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 89/224 (39%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ Y + +L + AI TV + L FPL K A + + P++ + + + Sbjct: 120 IQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHHHMPEMQKFSARIR 179 Query: 405 QSPPQVLQKA-------MIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ Q M + K H+I L L Q PVF A+ ++ ++ + Sbjct: 180 EAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVPS 239 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP + P++++ +M+ +++ Sbjct: 240 LQTGGLWWFQDLTVSDPIYVL-------------------PLVVTATMWCVLELGAETGV 280 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 281 QSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|218191963|gb|EEC74390.1| hypothetical protein OsI_09733 [Oryza sativa Indica Group] Length = 446 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 96/249 (38%), Gaps = 49/249 (19%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN------IQPKIDE 398 + L+ ++L G N+ I LT++ ++ L PL Q +T + ++P+I+ Sbjct: 142 LQHLIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQMKATVKLNVKTDSPAMRPEIEA 201 Query: 399 LREKFK-----------------------QSPPQVL---QKAMIQLYKTHNINPLAGCWP 432 + + + + PQ + ++ + +L+ H + PL Sbjct: 202 INLEMRTISSTRVAGNEKSSTRVTDEGSMSTDPQSMLEGKRKLGELFLRHGVTPLTPLKG 261 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMH 489 + +Q P+F + + IS +E + G W DL D I + L F Sbjct: 262 LFIQAPIFMSFFFAISNMVEKVPSFKGGGIYWFTDLTTPDELLILPMLTSLTF------- 314 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 ++++ + +Q M P K M V+ + SFP + YW SN+ S Sbjct: 315 ------LVTVELNMQDGMEGNPMLKTMKNFSRVMAVLTIPFTMSFPKAIFFYWVTSNLFS 368 Query: 550 IVQQAVIMK 558 + V+ K Sbjct: 369 LGYGFVLRK 377 >gi|67921808|ref|ZP_00515325.1| 60 kDa inner membrane protein [Crocosphaera watsonii WH 8501] gi|67856400|gb|EAM51642.1| 60 kDa inner membrane protein [Crocosphaera watsonii WH 8501] Length = 378 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 68/119 (57%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++L +PL+ Q + M+ Q Sbjct: 1 MDFGIGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRLGLYPLSAGQIRNMRKMRITQ 60 Query: 394 PKID----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E++ ++K P + Q+ M +L + NPLAGC P++LQ+P+ FA++ + Sbjct: 61 PLMKERQAEIQSRYKDDPAK-QQEEMGKLMQQFG-NPLAGCLPLVLQMPILFALFATLR 117 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 9/112 (8%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFAL 531 G+ + + S++I ++S + Q I P++F Sbjct: 253 LGQVGVTSDDGTINWDILGMILFFGASIYINQELSGSSGGGAQQQQAINKITPLIFSGMF 312 Query: 532 SSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 FP AG+++Y +NV +Q V+M+ L D L+ + ++ Sbjct: 313 LFFPLPAGVLMYIVVANVFQTLQTLVLMR-----EPLPDNLQKLLEEQEKAE 359 >gi|293364737|ref|ZP_06611454.1| SpoIIIJ family protein [Streptococcus oralis ATCC 35037] gi|291316187|gb|EFE56623.1| SpoIIIJ family protein [Streptococcus oralis ATCC 35037] Length = 312 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 31/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMKNI 392 + I PM + YF G FG+AI++ T+ V+L+ PL Q + M + Sbjct: 40 IWNTIGAPMAEAIKYFATDKGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMNAL 99 Query: 393 QPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIYKV 446 + ++ + + K++ Q Q+A+ K H I+ G C+PIL+Q+P F AIY Sbjct: 100 KHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILIQMPFFSAIYFA 159 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + + F G DL + P+ + F + +YL + + M Sbjct: 160 AQYTDGVASSTFLGI--DLGS--PSLLLVAFAGILYYLQSLLSLHGVEDEMQRDQL---- 211 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 ++ P++ V PA + +YW + I+QQ ++ + L Sbjct: 212 ----------KRMIYVSPLMIVVFSFFAPASVTLYWVVGGFMMILQQFIVN--YVVRPKL 259 Query: 567 IDRLRSTFSKNY 578 ++R F+KN Sbjct: 260 RKKVREEFAKNP 271 >gi|74178496|dbj|BAE32503.1| unnamed protein product [Mus musculus] gi|74181916|dbj|BAE32657.1| unnamed protein product [Mus musculus] Length = 433 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ Y + +L + AI TV + L FPL K A + N P++ + + + Sbjct: 120 IQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIR 179 Query: 405 QSPPQVLQKA-------MIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ Q M + K H+I L L Q PVF A+ ++ ++ + Sbjct: 180 EAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVPS 239 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP + P++++ +M+ +++ Sbjct: 240 LQTGGLWWFQDLTVSDPIYVL-------------------PLVVTATMWCVLELGAETGV 280 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 281 QSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|74221219|dbj|BAE42101.1| unnamed protein product [Mus musculus] Length = 433 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ Y + +L + AI TV + L FPL K A + N P++ + + + Sbjct: 120 IQNLLEYIHVDLSLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIR 179 Query: 405 QSPPQVLQKA-------MIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ Q M + K H+I L L Q PVF A+ ++ ++ + Sbjct: 180 EAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVPS 239 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP + P++++ +M+ +++ Sbjct: 240 LQTGGLWWFQDLTVSDPIYVL-------------------PLVVTATMWCVLELGAETGV 280 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 281 QSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|313900860|ref|ZP_07834350.1| putative stage III sporulation protein J [Clostridium sp. HGF2] gi|312954280|gb|EFR35958.1| putative stage III sporulation protein J [Clostridium sp. HGF2] Length = 331 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 107/273 (39%), Gaps = 27/273 (9%) Query: 314 EFPTIHHYEKDLAIPR--------FEMLIDWGWF-YFIAKPMFMLMSYFYNLVGNFGIAI 364 + + KD F +D GWF I P+ L+++ + + GI I Sbjct: 57 DDKELQKKYKDYKADDLITIEKTTFSDAMDEGWFNGLIVWPIAFLINFVADF-SDAGIGI 115 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---QSPPQVLQ-KAMIQLYK 420 + T ++LL F + K V++ M++IQP++++++ K+ ++ Q + M LY Sbjct: 116 IAATFLIQLLIFLFSIKSQVASQRMQSIQPEMNKIQAKYAGKTDDRSKMQQAQEMQALYS 175 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG------WIKDLAAADPTNIF 474 + INP +Q PV +Y+ + + F G I+ D I Sbjct: 176 KYKINPFGTLLVTFIQFPVILGMYQATMRAYSVVTGSFQGINLAKTPIEGFNLGDYWYIV 235 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-------VF 527 ++ F L F M ++ K P KG ++ M + + Sbjct: 236 IFVLMVAFQLLSFKMPQWLQEHRKKKMHVKEKKYAEPKKKGGNGMMGSMNMMMYMSTGMI 295 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++P G+ YW +++ ++Q VI K Sbjct: 296 AIFAINWPLGMSFYWLVNSLARVIQNIVIHKFF 328 >gi|312872933|ref|ZP_07732993.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2062A-h1] gi|311091455|gb|EFQ49839.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2062A-h1] Length = 319 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 113/262 (43%), Gaps = 33/262 (12%) Query: 332 MLIDWGWFY-FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ++ + W Y P+ +M + NL+G G AI++ T ++L+ PL Sbjct: 34 LVGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMI 93 Query: 388 NMKN----IQPKIDELREKFKQSPPQVLQ--KAMIQLYKTHNINPLAG--CWPILLQIPV 439 + +QP++ ++ K++ + +Q + +++YK +N++ + G C P+L+Q+P+ Sbjct: 94 KQQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPI 153 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 IY+ ++ S + + F G ++ + P+ +F + + + + G++ + Sbjct: 154 MMGIYQAVAYSKTLASSSFMG----ISLSKPSIVFAVVAAILYLIQGYLSLIGI------ 203 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + + + P++ + + L +Y+ ++ ++QQ + + Sbjct: 204 ---------SEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIATFI 254 Query: 560 HGAEIGLIDRLRSTFSKNYNSQ 581 ++ + +KN + Sbjct: 255 LMPKV--RADVDKELTKNPIKE 274 >gi|29831751|ref|NP_826385.1| hypothetical protein SAV_5208 [Streptomyces avermitilis MA-4680] gi|29608868|dbj|BAC72920.1| putative membrane protein [Streptomyces avermitilis MA-4680] Length = 243 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 17/210 (8%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T V+LL PL++ +QP++ ELR+K ++P + LQKA+++L+ Sbjct: 28 IVLFTALVRLLVHPLSRASARGQRARARLQPQVAELRKKHGKNP-EKLQKALLELHAEEK 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG-ILPF 482 ++PL+GC P L Q+P FF +Y + S + A G PF Sbjct: 87 VSPLSGCLPGLFQLPAFFLLYHLFSNTTIGGEGNELLTHTLFTAPLGDRWADALGDGGPF 146 Query: 483 YLPGFMHVGIWPIIMSLSMF------IQMKMSPPP-ADKGQA-----MILNWMPVVFVFA 530 G +++G++ I+ +++ F M +P P D Q I +MP++ F Sbjct: 147 GTQGLVYLGLFAIVAAVATFNYRRTKRTMAANPLPVGDGEQQVPGLGAINRFMPLMSFFT 206 Query: 531 LSS---FPAGLIIYWSWSNVISIVQQAVIM 557 L + P +Y S S V++A + Sbjct: 207 LFTVAFVPLAAALYVVTSTTWSAVERAALY 236 >gi|15225991|ref|NP_182170.1| OXA1L (INNER MEMBRANE PROTEIN OXA1-LIKE) [Arabidopsis thaliana] gi|38372506|sp|Q9SKD3|OXA1L_ARATH RecName: Full=Mitochondrial inner membrane protein OXA1-like; Flags: Precursor gi|4559387|gb|AAD23047.1| putative cytochrome oxidase biogenesis protein [Arabidopsis thaliana] gi|19347873|gb|AAL85994.1| putative cytochrome oxidase biogenesis protein [Arabidopsis thaliana] gi|24030491|gb|AAN41393.1| putative cytochrome oxidase biogenesis protein [Arabidopsis thaliana] gi|26450688|dbj|BAC42453.1| putative cytochrome oxidase biogenesis protein [Arabidopsis thaliana] gi|330255608|gb|AEC10702.1| inner membrane OXA1-like protein [Arabidopsis thaliana] Length = 431 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 50/227 (22%), Positives = 93/227 (40%), Gaps = 22/227 (9%) Query: 341 FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 F + L+ ++ G N+ +I LTTV ++ + P+ Q +T + ++P+++EL Sbjct: 135 FPVAALQHLIDAVHSFTGLNWWASIALTTVLIRGVTIPILLNQLKATYKLNVLRPQLEEL 194 Query: 400 REKF--KQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 R++ K P+ + Q+ M L+K H + P +++Q P+F + + I E Sbjct: 195 RQEMSTKAQDPEAMAEGQRRMQLLFKEHGVTPFTPLKGLIIQGPIFISFFFAIRNMAEKV 254 Query: 455 HAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 + G W DL D T I L + F +IM S +Q + P Sbjct: 255 PSFKTGGTLWFTDLTTTDTTYILPLLTAVTF------------LIMVESN-MQEGLEGNP 301 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + + + L L YW SN+ ++V + + Sbjct: 302 VAGTMKKFSRIIAFLSIPVLIGIEKALFCYWLTSNLFTLVYGLTLRR 348 >gi|302331670|gb|ADL21864.1| Preprotein translocase subunit YidC [Corynebacterium pseudotuberculosis 1002] Length = 415 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 112/290 (38%), Gaps = 58/290 (20%) Query: 341 FIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 P+ +M ++ + N + +++ + V+ + P Q S Sbjct: 19 IFIYPVSGVMKLWHLFLANMLGVPASLAWALSLFALVITVRGIVAPFTWIQLKSGRAGIL 78 Query: 392 IQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++PK+ L+E++++ + Q+ +L+K + + +GC P L+QIPVF +Y+V+ Sbjct: 79 MRPKLKRLQEEYEEKTDKESILEYQQKQKELHKEYGYSVKSGCVPALIQIPVFLGLYQVL 138 Query: 448 ---SISLEMRHAPFWGWIKDLAAADPTNIF------------------TLFGILPFYLPG 486 + +E A I L++ D + + Y Sbjct: 139 LRMARPMEGLDANNHAPIGLLSSDDVSAFLESRVSDVPLPAYNAMSAEQFARLNTTYDAV 198 Query: 487 FMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMILNWMPVVFVFAL--------- 531 V I + I + +S D G A+ LN + ++ +F Sbjct: 199 HAFVTPLIIAACVFTVINLIISVVRNNYSVDHDSGLAVQLNRLLIIMIFFTPLMLISLGL 258 Query: 532 -SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 S PA + +YW +N+ +++Q A++ L+ R++ F K + + Sbjct: 259 RSPIPAAICMYWVANNLWTLIQNALMY--------LVLRIKYPFDKEHQA 300 >gi|186682017|ref|YP_001865213.1| inner membrane protein translocase component YidC [Nostoc punctiforme PCC 73102] gi|186464469|gb|ACC80270.1| 60 kDa inner membrane insertion protein [Nostoc punctiforme PCC 73102] Length = 383 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 70/119 (58%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ V+ +PL+ + M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYGIVPSYGLAIVALTLIVRFALYPLSAGSIRNMRKMRIVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P ++ E++E++K PQ Q+ M+ + K NPLAGC+P+L+Q+PV A++ + Sbjct: 61 PLMQKRMAEIKERYK-DEPQKQQEEMVNVQKEFG-NPLAGCFPLLVQMPVLLALFATLR 117 Score = 57.3 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 37/109 (33%), Gaps = 6/109 (5%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFA 530 G + + +S+++ +S + + Q + PV+F Sbjct: 253 LGRVGAQDADGTIHWDIVAMIVFFGISLYVSQMLSGQNSSGGNPQQDTVNKITPVIFSGM 312 Query: 531 LSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 FP AG+++Y N+ Q ++ + E L + + + Sbjct: 313 FLFFPLPAGVLMYMVIGNIFQTAQTYLLSREPLPE-ELQKIVETQEKET 360 >gi|309778005|ref|ZP_07672947.1| stage III sporulation protein J [Erysipelotrichaceae bacterium 3_1_53] gi|308914294|gb|EFP60092.1| stage III sporulation protein J [Erysipelotrichaceae bacterium 3_1_53] Length = 331 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 104/277 (37%), Gaps = 35/277 (12%) Query: 314 EFPTIHHYEKDLAIPR--------FEMLIDWGWF-YFIAKPMFMLMSYFYNLVGNFGIAI 364 + + KD F ID GWF I P+ L+++ + + GI I Sbjct: 57 DNKELQKKYKDYKADDLITIEKTTFSDAIDEGWFNGLIVWPIAFLINFVADF-SDAGIGI 115 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---QSPPQVLQ-KAMIQLYK 420 + T ++LL F + K V++ M+ IQP++++++ K+ ++ Q + M LY Sbjct: 116 IAATFLIQLLIFLFSIKSQVASQRMQAIQPEMNKIQAKYAGKTDDRSKMQQAQEMQALYS 175 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 + INP +Q PV +Y+ + + F G A P F L G Sbjct: 176 KYKINPFGTLLVTFIQFPVILGMYQATMRAYSVVTGSFQGINL---AKTPIEGFNL-GNY 231 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQM-----------------KMSPPPADKGQAMILNWM 523 + + + V + + ++Q K M++ Sbjct: 232 WYVVIFVLMVAFQLLSFKMPQWLQEHRKKKLNIKEKKYAEPKKKGGNGMMGSMNMMMYMS 291 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + ++P G+ YW +++ ++Q VI K Sbjct: 292 TGMIAIFAINWPLGMSFYWLVNSLARVIQNIVIHKFF 328 >gi|260905353|ref|ZP_05913675.1| preprotein translocase YidC subunit [Brevibacterium linens BL2] Length = 270 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 103/246 (41%), Gaps = 25/246 (10%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y++ + L+ + +AI++ T+ V+ + P+ Q + K + PKI EL Sbjct: 17 YWVVTWLTTLLEPLAG-TASAALAIVVLTIIVRAVLIPVGLSQVRAGITRKRLAPKITEL 75 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 + ++K++P +++Q+ M++LYK +P+AGC P+L Q+PV A+Y + S HA Sbjct: 76 QTRYKKTP-ELMQQKMMELYKEEKASPMAGCLPVLAQMPVLMAVYGIFIQSTIGGHANDL 134 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ-------MKMSPP-- 510 L L + G+ II+++ + M +PP Sbjct: 135 LNHSLLGVPLNAGFVGLLTGGNLSVVSAAVFGVIVIIIAVVAALSRHLLTPDMPQTPPVR 194 Query: 511 -----------PADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 PA G +L++MP + P +Y + ++ ++ V+ Sbjct: 195 ASGSQNSTTEGPAMPDLSGVTRVLSFMPFMTAVIALFVPLAATLYLMTTTAWTLTERLVL 254 Query: 557 MKMHGA 562 ++ Sbjct: 255 NRVLKV 260 >gi|256850849|ref|ZP_05556238.1| preprotein translocase subunit YidC [Lactobacillus jensenii 27-2-CHN] gi|260661060|ref|ZP_05861974.1| preprotein translocase subunit YidC [Lactobacillus jensenii 115-3-CHN] gi|282934480|ref|ZP_06339735.1| putative membrane protein [Lactobacillus jensenii 208-1] gi|297205723|ref|ZP_06923118.1| membrane protein OxaA [Lactobacillus jensenii JV-V16] gi|256615911|gb|EEU21099.1| preprotein translocase subunit YidC [Lactobacillus jensenii 27-2-CHN] gi|260547997|gb|EEX23973.1| preprotein translocase subunit YidC [Lactobacillus jensenii 115-3-CHN] gi|281301427|gb|EFA93716.1| putative membrane protein [Lactobacillus jensenii 208-1] gi|297148849|gb|EFH29147.1| membrane protein OxaA [Lactobacillus jensenii JV-V16] Length = 324 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 98/260 (37%), Gaps = 39/260 (15%) Query: 337 GWFY----FIAKPMFMLMSYFYNLVGNF---GIAIMLTTVFVKLLFFPLAKKQYV----S 385 G+F FI P+ +M N +G G AI + T ++ + PL Sbjct: 38 GFFGLIYQFIGIPIRNIMLATENAIGGTNGAGWAIAIITAVIRFVLLPLMLSSSKKSTIQ 97 Query: 386 TANMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIP 438 + +Q + +++ K + + ++Y+ +N++ G C P+++Q P Sbjct: 98 QEKVSRLQDQFKLIQDALKDRSLTPDKQMQISQLQQKVYRENNLSITGGIGCLPLIVQFP 157 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 IY+ ++ S + + F+G ++ P+ +F + G L + Sbjct: 158 FMIGIYQAVAYSDALYKSSFFG----VSLGKPSLLFAIVGALFYL--------------- 198 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + ++ + P++ +F S P L +Y+ +I+++QQ ++ Sbjct: 199 AQSLLMLRGVSEQQRAAMQSTIFISPLMTLFISMSTPGALGLYFLVGGIIALIQQVIVTY 258 Query: 559 MHGAEIGLIDRLRSTFSKNY 578 + ++ + + Sbjct: 259 IILPRAK--AKIDAELKEKP 276 >gi|625665|pir||C36925 cbbR 3'-region hypothetical protein - Xanthobacter flavus (fragment) Length = 106 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 44/100 (44%), Positives = 70/100 (70%), Gaps = 2/100 (2%) Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 + ++ +G WP+IM ++M++QMK++P P D Q MI NWMP++F F L+ F AGL+IYW+ Sbjct: 6 IGSYLLLGAWPLIMGVTMWVQMKLNPAPPDPTQQMIFNWMPIIFTFMLAHFAAGLVIYWA 65 Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRS--TFSKNYNSQ 581 W+N +S+ QQAVIM+ +G +I L D ++ F K ++ Sbjct: 66 WNNTLSVTQQAVIMRRNGVKIELWDNIKGALGFGKKSAAK 105 >gi|325478864|gb|EGC81974.1| membrane protein insertase, YidC/Oxa1 family [Anaerococcus prevotii ACS-065-V-Col13] Length = 232 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 97/209 (46%), Gaps = 9/209 (4%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + IAI+L T+ V L+ P+ Q K +PK++E+++K+ + QK LY Sbjct: 21 YAIAIILMTLLVSLMIIPMTISQQKQAERTKVFKPKMEEIQKKYGYDQQIMQQKMQQ-LY 79 Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 K + P ++GC +++QI V F +++++S + + + D + I TL Sbjct: 80 KEEGVTPGISGCLVMIIQILVLFGLFRMMSDTTKY----VFPEGLDNVKTNFYWIPTLLD 135 Query: 479 ILPFY--LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 P++ LP + + + + SM +M A G + MP+++ F PA Sbjct: 136 KDPYWFGLPLLTSLSQFAVQL-FSMKTNPQMQQGGAMGGMNNMFLLMPLMYFFVFRGLPA 194 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 GL +Y++ S++ +V ++ + Sbjct: 195 GLPLYYTLSSLFRLVIMVIMHFAMRNKKE 223 >gi|323342260|ref|ZP_08082492.1| hypothetical protein HMPREF0357_10673 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463372|gb|EFY08566.1| hypothetical protein HMPREF0357_10673 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 280 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 54/237 (22%), Positives = 99/237 (41%), Gaps = 10/237 (4%) Query: 336 WG---WFY-FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WG WF P+ +++F VG G +I++ T+ +K++ + K V M+ Sbjct: 45 WGSDTWFGALFVWPIAQALNFFSQYVGTIG-SIVVVTLIIKIITIKGSIKATVQQQKMQL 103 Query: 392 IQPKIDELREKF--KQSPPQVLQK--AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 I P+ + K+ + LQK M +L++ H INP+ LQ+P+ A+Y+ + Sbjct: 104 IGPEQARIEAKYQGRNDQQAKLQKATEMQKLFEKHEINPMGALGGTFLQLPIMIAMYQAV 163 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S + + +G +L + I F L + L+ K Sbjct: 164 MRSEAIINGTVFGQTLELTPMQGFTQGNIIIIGIFILMALSQFLSMFLPQYLAKQKIRKR 223 Query: 508 SPPPADKGQA-MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 S QA M++ ++ V ++ G+ +YW S + +VQ I +GA+ Sbjct: 224 SYEKQPANQANMMMYSSLIMIVVLALNWQVGMSLYWMVSALAQLVQTLFINHKYGAK 280 >gi|119510151|ref|ZP_01629290.1| putative inner membrane protein translocase component YidC [Nodularia spumigena CCY9414] gi|119465212|gb|EAW46110.1| putative inner membrane protein translocase component YidC [Nodularia spumigena CCY9414] Length = 380 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 70/119 (58%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL+ + M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYGIVPSYGLAIVALTLIIRFALYPLSAGSIRNMRKMRIVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P ++ E++EK+K +P Q Q+ M+ + K NPLAGC P++LQ+PV A++ + Sbjct: 61 PLMQKRMAEIKEKYKDNP-QKQQEEMVNVQKEFG-NPLAGCLPLVLQMPVLLALFATLR 117 Score = 56.9 bits (136), Expect = 9e-06, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 9/139 (6%) Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF---MHVGIWPIIMSLSMFIQMKM 507 LE G I LAA G + P + + +S+++ + Sbjct: 227 LEPGDVTIQGSIPGLAAEKGFLFIQALGRVGAQNPDGQINWDIVSMILFFGVSLYVSQMI 286 Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGA 562 S + + Q + PV+F FP AG+++Y N+ Q ++ + Sbjct: 287 SGQNSSGGNPQQDTVNKITPVIFSGMFLFFPLPAGVLMYMVIGNIFQTAQTYILSREPLP 346 Query: 563 EIGLIDRLRSTFSKNYNSQ 581 E GL + + + + Q Sbjct: 347 E-GLQEIVATQEKETAAEQ 364 >gi|238854473|ref|ZP_04644812.1| preprotein translocase subunit YidC [Lactobacillus jensenii 269-3] gi|260665479|ref|ZP_05866326.1| preprotein translocase subunit YidC [Lactobacillus jensenii SJ-7A-US] gi|238832900|gb|EEQ25198.1| preprotein translocase subunit YidC [Lactobacillus jensenii 269-3] gi|260560747|gb|EEX26724.1| preprotein translocase subunit YidC [Lactobacillus jensenii SJ-7A-US] Length = 322 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 101/260 (38%), Gaps = 39/260 (15%) Query: 337 GWFY----FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLA----KKQYVS 385 G+F FI P+ +M N +G G AI + T ++ + PL KK + Sbjct: 38 GFFGLIYQFIGIPIRNIMLATENAIGGSNGAGWAIAIITAVIRFVLLPLMLSTSKKSTIQ 97 Query: 386 TANMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIP 438 + +Q + +++ K + + ++Y+ +N++ G C P+L+Q P Sbjct: 98 QEKVSRLQDQFKLIQDALKDRSLTPDKQMQISQLQQKVYRENNLSITGGIGCLPLLVQFP 157 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 IY+ ++ S + + F+G ++ P+ +F + G L + Sbjct: 158 FMIGIYQAVAYSDALYKSNFFG----VSLGKPSLLFAIVGALFYL--------------- 198 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + ++ + P++ +F S P L +Y+ +I+++QQ ++ Sbjct: 199 AQSLLMLRGVSEQQRAAMQSTVFISPLMTLFISMSTPGALGLYFLVGGIIALIQQVIVTY 258 Query: 559 MHGAEIGLIDRLRSTFSKNY 578 + ++ + + Sbjct: 259 IILPRAK--AKIDAELKEKP 276 >gi|320527122|ref|ZP_08028309.1| membrane protein insertase, YidC/Oxa1 family [Solobacterium moorei F0204] gi|320132450|gb|EFW24993.1| membrane protein insertase, YidC/Oxa1 family [Solobacterium moorei F0204] Length = 302 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 107/250 (42%), Gaps = 21/250 (8%) Query: 338 WFY-FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 WF P+ +++ ++ G AI + TV V L K + M+ +QP++ Sbjct: 54 WFSALFVWPLSWVLNKLAPVIT-VGGAIAIVTVVVNGLLAVFTLKSQMGMQRMQMLQPEL 112 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 ++++ K++ Q + + QL + +N+NP + +Q+P+ A++ I + Sbjct: 113 NKIQRKYEGRDDQASKMRMAQEQQQLMRKYNVNPGSMMLVQFVQLPIIMAMFMAIQRAEA 172 Query: 453 MRHAPFWGWIKDLAAADPTNIF--TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 + + F G + ++ + LP+ + + +++ L ++ Q K Sbjct: 173 VVNGTFLGMNLQVKPSEAFGLLFKGDLSGLPYIILFLLMAVTQVVLVLLPIYFQKKKAAA 232 Query: 508 -------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV---IM 557 P P + M+ +M V+ + + +G+ ++W N++ I++ + IM Sbjct: 233 EAAKHHRKPEPTNNQNIMMQMYMIVMVLAFGLMWQSGMSLFWFIRNIVDIIKTIIVQNIM 292 Query: 558 KMHGAEIGLI 567 + + + GL Sbjct: 293 EKNSQKEGLR 302 >gi|289549616|ref|YP_003470520.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] gi|289179148|gb|ADC86393.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] Length = 258 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 92/216 (42%), Gaps = 31/216 (14%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMKNIQPKIDELREKFKQSPPQVLQK 413 N+G+AI++ V+L+ PL A MK +QPKI+ +++K K + Q L+ Sbjct: 52 HNYGLAIVIIVCLVRLILMPLMLHNQKQMAITSMKMKELQPKIEPIQQKMKAAATQQLKN 111 Query: 414 A-------MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--SISLEMRHAPFWGWIKD 464 + Q ++ + + + GC P+L+QIP+ F +Y + S + P + W Sbjct: 112 EAYQELQQLYQQHQLNPLTTMFGCLPMLIQIPILFGLYATLKWPTSGGILSYPTFMWFH- 170 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L + D + I + G + F + ++ + P +++ P Sbjct: 171 LTSPD-SMIAMIAGFMYF----------------VQSWLSARQMPKEQRMMGYVMMIVSP 213 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + ++ P+ L +YW + + I+Q + + Sbjct: 214 LFILYIAFQSPSALALYWFVNAALLILQAIISQRQT 249 >gi|282934543|ref|ZP_06339795.1| putative membrane protein [Lactobacillus jensenii 208-1] gi|313471836|ref|ZP_07812328.1| membrane protein [Lactobacillus jensenii 1153] gi|281301381|gb|EFA93673.1| putative membrane protein [Lactobacillus jensenii 208-1] gi|313449008|gb|EEQ68251.2| membrane protein [Lactobacillus jensenii 1153] Length = 326 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 101/260 (38%), Gaps = 39/260 (15%) Query: 337 GWFY----FIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLA----KKQYVS 385 G+F FI P+ +M N +G G AI + T ++ + PL KK + Sbjct: 42 GFFGLIYQFIGIPIRNIMLATENAIGGSNGAGWAIAIITAVIRFVLLPLMLSTSKKSTIQ 101 Query: 386 TANMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIP 438 + +Q + +++ K + + ++Y+ +N++ G C P+L+Q P Sbjct: 102 QEKVSRLQDQFKLIQDALKDRSLTPDKQMQISQLQQKVYRENNLSITGGIGCLPLLVQFP 161 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 IY+ ++ S + + F+G ++ P+ +F + G L + Sbjct: 162 FMIGIYQAVAYSDALYKSNFFG----VSLGKPSLLFAIVGALFYL--------------- 202 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + ++ + P++ +F S P L +Y+ +I+++QQ ++ Sbjct: 203 AQSLLMLRGVSEQQRAAMQSTVFISPLMTLFISMSTPGALGLYFLVGGIIALIQQVIVTY 262 Query: 559 MHGAEIGLIDRLRSTFSKNY 578 + ++ + + Sbjct: 263 IILPRAK--AKIDAELKEKP 280 >gi|282901452|ref|ZP_06309377.1| 60 kDa inner membrane insertion protein [Cylindrospermopsis raciborskii CS-505] gi|281193731|gb|EFA68703.1| 60 kDa inner membrane insertion protein [Cylindrospermopsis raciborskii CS-505] Length = 389 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY + ++G+AI+ T+ ++ +PL+ S M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYGVFPSYGLAIVALTLIIRFALYPLSAGSIRSMRRMRIVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P ++ E++E++K P Q Q+ M+ + K NPLAGC P+LLQ+PV A++ + Sbjct: 61 PVMQKRMAEIKERYKDDP-QKQQEEMVNVQKEFG-NPLAGCLPLLLQMPVLLALFATLR 117 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 10/138 (7%) Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG---FMHVGIWPIIMSLSMFIQMKM 507 LE G I LAA G + P + I +S++ + Sbjct: 227 LEPGDVTIQGTIPGLAANSGFLFIDALGRVGAIDPDGKIHWDIVGMIIFFGISLYFSQML 286 Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGA 562 S + + Q + PV+F FP AG+++Y NV +Q ++ + Sbjct: 287 SGQNSSGGNPQQETVNKITPVIFSGMFLFFPLPAGVLMYMVIGNVFQTLQTYILSREPLP 346 Query: 563 EIGLIDRLRSTFSKNYNS 580 E + ++ + K + Sbjct: 347 EE--LQKIVAIQEKEKQA 362 >gi|193217059|ref|YP_002000301.1| putative inner membrane protein translocase component YidC [Mycoplasma arthritidis 158L3-1] gi|193002382|gb|ACF07597.1| preprotein translocase subunit YidC [Mycoplasma arthritidis 158L3-1] Length = 650 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 104/248 (41%), Gaps = 23/248 (9%) Query: 335 DWG---WFYFIAKPMFMLMSYFYNLVGNFGIAIM----LTTVFVKLLFFPLAKKQYVSTA 387 WG ++ +P+ + M+ +G G +++ +T + V+L+ F ++ K S + Sbjct: 392 YWGLGPFYGLFVQPVNLFMNAIITGLGTTGWSVILALVVTVIIVRLIAFAVSFKATFSQS 451 Query: 388 NMKNI---QPKIDELREKFKQSPP--QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 M+ + KI+ ++K Q Q + +LYK I+P +G + +P+ Sbjct: 452 RMEEFNQKKAKIEAKYAEYKSDKQMQQRKQLEIAELYKKEKISPWSGLISSFITLPILIV 511 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 ++++IS S E++ A ++ + + + + G L + VGI + + Sbjct: 512 VFRIISASPEIKQATWY----SIQLSTSSIRRVIAGDLIYLPIIIFSVGIQALAQYMPKI 567 Query: 503 IQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + K A K + N + ++F+ F AGL IYW + +I+Q Sbjct: 568 LNRKKKSLRANAYQQAALKKENKKFNIISLIFIGIGVIFSAGLQIYWIIGGIWTILQHIF 627 Query: 556 IMKMHGAE 563 + + Sbjct: 628 VHYFQKTK 635 >gi|25029343|ref|NP_739397.1| putative inner membrane protein translocase component YidC [Corynebacterium efficiens YS-314] gi|259505655|ref|ZP_05748557.1| membrane protein OxaA [Corynebacterium efficiens YS-314] gi|38503027|sp|Q8FLS3|OXAA_COREF RecName: Full=Membrane protein oxaA gi|23494631|dbj|BAC19597.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259166737|gb|EEW51291.1| membrane protein OxaA [Corynebacterium efficiens YS-314] Length = 397 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 115/293 (39%), Gaps = 54/293 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F+ P+ +M ++ L+ + I++ + V+ + P K Y S Sbjct: 2 LDFLIYPVSGVMKLWHLLLHNGLGLDDSLAWFISLFGLVITVRAIIAPFTWKMYKSGRLT 61 Query: 390 KNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 I+PK + E+FK + +Q+ L K + INP AGC P L+QIPV +Y+ Sbjct: 62 AQIRPKRVAIAEEFKGRHDEDSIREMQQKYKDLNKEYGINPFAGCVPTLIQIPVILGLYQ 121 Query: 446 VISISLEMRHA---PFWGWIKDLAAAD--------------------PTNIFTLFG---- 478 V+ + P I L+A + P T G Sbjct: 122 VLLLMARPEGGLENPVPRSIGFLSAEEVQSFLQGRVFNVPLPAYVTMPAEQLTFLGTTRE 181 Query: 479 -ILPFYLPGFMHVGIW-PIIMSLSMFIQMKMSPPPADKGQAMILNWM------PVVFVFA 530 +L F LP F+ ++ M+LS + ++ + ++ M ++ P+ + Sbjct: 182 DVLSFVLPLFIVAAVFTAFNMALSTYRNIQTNDYASNISNGMFKAFLWLAVLAPLFPLVL 241 Query: 531 LSS--FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + FP + +YW +N+ + Q A++ + L + F +++ +Q Sbjct: 242 GLTGPFPTAIALYWVANNLWTFGQTAIMHYIIERNYPLTE----EFKEHHAAQ 290 >gi|304414030|ref|ZP_07395398.1| putative inner membrane protein [Candidatus Regiella insecticola LSR1] gi|304283244|gb|EFL91640.1| putative inner membrane protein [Candidatus Regiella insecticola LSR1] Length = 380 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 106/272 (38%), Gaps = 19/272 (6%) Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID---WGWFYFIAKPMFMLMSYFYN 355 KS T G + + D F+ + W + + ++ + Sbjct: 114 HKSDTENQVSSMGKTRAQLLLKSDLDQLPQYFQKIKYAHLWAPLRLLCLGIEAILLWLNT 173 Query: 356 LVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-PPQVLQK 413 + +GI I+L ++ KL P + + ++Q ++ E K + + + Sbjct: 174 IHSFGWGITIILLSLLFKLFILPANILLTRAQRKVSHLQARLAPELEYIKANFTGEEAHQ 233 Query: 414 AMIQLYKTHNINPL---AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + ++K ++P L P AI+ V+S + P + WI+DLA D Sbjct: 234 KFMAVHKQQGVSPFYNLRSLLLTLAPFPFLIAIFNVLSEMDLIAGHP-FLWIEDLAYPD- 291 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-----QMKMSPPPADKGQAMILNWMPV 525 I+ L +P + + PI+M+L + Q K+ + Q + L +M Sbjct: 292 -AIYHLGFHIPLLGAS---INLLPILMTLLTILAAVIHQNKIISTKELRKQKLNLYFMAE 347 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 F FP+ +++YW ++N+ ++QQ + Sbjct: 348 GFFLLFYPFPSTMVLYWIFANIWQLIQQRFVR 379 >gi|332018694|gb|EGI59266.1| Mitochondrial inner membrane protein OXA1L [Acromyrmex echinatior] Length = 442 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 63/248 (25%), Positives = 102/248 (41%), Gaps = 37/248 (14%) Query: 326 AIPRFEMLIDWGW-FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 P FE L GW I + M NL + +AI++TT+ + L FPL K Sbjct: 133 GEPTFESLGLGGWTPTGIVHNLLEFMHI--NLDMPWWLAIVITTICARSLLFPLVIKTQK 190 Query: 385 STANMKNIQPKIDELREKFK-----QSPPQVLQ--KAMIQLYKTHNINPLAGCWPILLQI 437 + + N PKI + + Q Q M++ KT+ I+ L+Q Sbjct: 191 NVIRLTNHMPKIQDFNIRLTEARNCGDHMQSAQIATEMMKYMKTNKISFTQNVMMPLVQA 250 Query: 438 PVF----FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 PVF FA+ K+ ++ +E + W+KDL DP I Sbjct: 251 PVFISFFFALRKMANLPVESLKDGGFLWLKDLTVYDPYYI-------------------M 291 Query: 494 PIIMSLSMFIQMKMSPPP----ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 PII S++MFI +++ A +L +P V + + FP ++ YW +N +S Sbjct: 292 PIITSVTMFITIELGTDGTNIYAMGVMRYVLRALPFVALPFMLHFPGTILTYWVATNTVS 351 Query: 550 IVQQAVIM 557 ++Q + Sbjct: 352 LIQTGFLK 359 >gi|109082863|ref|XP_001099660.1| PREDICTED: mitochondrial inner membrane protein OXA1L [Macaca mulatta] Length = 437 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 83/224 (37%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR---- 400 + L+ + + +L + AI TVF + L FPL A + N P+I + Sbjct: 125 IQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVVGQREAAKIHNHLPEIQKFSSRVR 184 Query: 401 -EKFKQSPPQ--VLQKAMIQLYKTHNINPLAGCWPILLQIPVF----FAIYKVISISLEM 453 K + M K H I L Q P+F A+ ++ ++ + Sbjct: 185 EAKLAGDDTEFYKASSEMALYQKKHGIKLFKPLILPLTQAPIFLSFFIALREMANLPVAS 244 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DPT + P++++ +M+ +++ Sbjct: 245 LQTGGLWWFQDLTVSDPTYVL-------------------PLVVTATMWAVLELGAETGV 285 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ MP++ + FP + IYW SN+ S+ Q Sbjct: 286 QSSDLQWMRNVIRVMPLIALPVTMHFPTAVFIYWLSSNLFSLGQ 329 >gi|108705853|gb|ABF93648.1| 60Kd inner membrane protein, expressed [Oryza sativa Japonica Group] Length = 436 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 96/243 (39%), Gaps = 47/243 (19%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ ++L G N+ I LT++ ++ L PL Q +TA ++P+I+ + + + Sbjct: 142 LQHLIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQMKATA----MRPEIEAINLEMR 197 Query: 405 -----------------------QSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIP 438 + PQ + ++ + +L+ H + PL + +Q P Sbjct: 198 TISSTRIAGNEKSSTRVTDEGSMSTDPQSMLEGKRKLGELFLRHGVTPLTPLKGLFIQAP 257 Query: 439 VFFAIYKVISISLEMRHAPFWG---WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 +F + + IS +E + G W DL D I + L F Sbjct: 258 IFMSFFFAISNMVEKVPSFKGGGIYWFTDLTTPDELLILPMLTSLTF------------- 304 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++++ + +Q M P K M V+ + SFP + YW SN+ S+ V Sbjct: 305 LVTVELNMQDGMEGNPMLKTMKNFSRVMAVLTIPFTMSFPKAIFFYWVTSNLFSLGYGFV 364 Query: 556 IMK 558 + K Sbjct: 365 LRK 367 >gi|42526944|ref|NP_972042.1| inner membrane protein [Treponema denticola ATCC 35405] gi|41817259|gb|AAS11953.1| inner membrane protein [Treponema denticola ATCC 35405] Length = 916 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 16/202 (7%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE----LREKFKQSPPQVLQK 413 GN GI+I+L ++ + ++ P+ + IQ K+ ++ FK ++ Sbjct: 30 GNIGISIVLLSLGINIICLPMYNVAEQWQEKERAIQKKMKAKITDIKAVFKGDERYLMLS 89 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 + H + L + + +QIP F A YK++S S M + + + DL + D Sbjct: 90 TYYRQNNYHPLYALRSMFALFIQIPFFIAAYKLLSDSPIMAKSS-FLFFTDLGSPDK--- 145 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 G + V I PIIM+L + + + L ++F+ L + Sbjct: 146 --------LLSLGNISVNILPIIMTLINISASAVYTKGLELKDKLTLYITALIFLLLLYN 197 Query: 534 FPAGLIIYWSWSNVISIVQQAV 555 P+GL+ YW+ +N+ S+++ Sbjct: 198 SPSGLVFYWTLNNLFSLLKNIF 219 >gi|307198512|gb|EFN79417.1| Mitochondrial inner membrane protein OXA1L [Harpegnathos saltator] Length = 275 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 97/237 (40%), Gaps = 34/237 (14%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP-------PQVLQ 412 + I++ TV ++ L FPL + A N P I E+++K ++ Sbjct: 9 WWTTIVIGTVILRTLIFPLVVITQKNMAKFTNHMPVIQEIQQKMTKARHIGDHFESARYA 68 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468 +++ K HN+ L+Q P+F A+ K+ ++ +E + W++DL Sbjct: 69 SELMEYMKKHNVKIGRNFLIPLVQAPIFISCFLALRKMANLPVESLKQGGFWWMQDLTIH 128 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG----QAMILNWMP 524 DP I PI+ ++M+I +++ + +P Sbjct: 129 DPYYI-------------------MPIVTCVTMYITIEIGADGTHLKSLGVMRYVFRIVP 169 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + +FP ++ YW+ +N +S++Q +++ + ++ I + SK N + Sbjct: 170 FAILPFILNFPGAILTYWASTNFMSLIQTSLLKIPYLRKVFNIPVIIHHASKPGNKK 226 >gi|302551683|ref|ZP_07304025.1| membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302469301|gb|EFL32394.1| membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 250 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 16/210 (7%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T V+LL PL++ +QPKI ELR+K ++P + LQ+A+++L+ Sbjct: 42 IVLFTALVRLLVHPLSRAAARGQKARTALQPKIAELRKKHGKNP-EKLQRAVLELHAEEK 100 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 ++PLAGC P LLQ+P FF +Y + S + LAA PF Sbjct: 101 VSPLAGCLPGLLQVPAFFLLYHLFSSDTIGGETNELLGHQLLAAPLGGRWADALQAGPFG 160 Query: 484 LPGFMHVG---IWPIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFAL 531 G ++ G + + S + +M G + MP + F L Sbjct: 161 GAGLVYAGLFVVVACVAVFSYRLSKRMMAANPAVQVSGGEQMPGVGAVTKVMPFMSFFTL 220 Query: 532 SS---FPAGLIIYWSWSNVISIVQQAVIMK 558 + P +Y S S+V++A + + Sbjct: 221 ITVAVVPLAAALYVVTSTTWSVVERAALYR 250 >gi|307709736|ref|ZP_07646187.1| membrane protein oxaA 1 [Streptococcus mitis SK564] gi|307619438|gb|EFN98563.1| membrane protein oxaA 1 [Streptococcus mitis SK564] Length = 308 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 101/259 (38%), Gaps = 34/259 (13%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----ST 386 I + W I PM + YF G FGIAI++ T+ V+L+ PL Q + Sbjct: 32 KPIGFIWNT-IGAPMAEAIKYFATDKGLGFGIAIIIVTIIVRLIILPLGIYQSWKATLHS 90 Query: 387 ANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 M ++ ++ + + K++ Q Q+A+ K H I+ G C+PILLQ+P F Sbjct: 91 EKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFF 150 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 AIY + + A + G +P P + ++ L Sbjct: 151 SAIYFAAQYTEGVAQASYLG-------------------IPLGSPSMILAACAGVLYYLQ 191 Query: 501 MFIQMKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + + + Q + PV+ PA + +YW + I+QQ ++ Sbjct: 192 SLLSLHGVEDETQRDQIKKMAYVSPVMIAGFSLISPASVTLYWVVGGFMMILQQFIVN-- 249 Query: 560 HGAEIGLIDRLRSTFSKNY 578 + L ++R +KN Sbjct: 250 YIVRPKLRKKVREELAKNP 268 >gi|282898270|ref|ZP_06306261.1| 60 kDa inner membrane insertion protein [Raphidiopsis brookii D9] gi|281196801|gb|EFA71706.1| 60 kDa inner membrane insertion protein [Raphidiopsis brookii D9] Length = 389 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY + ++G+AI+ T+ ++ +PL+ S M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYGVFPSYGLAIVALTLIIRFALYPLSAGSIRSMRRMRIVQ 60 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P ++ E++E++K P Q Q+ M+ + K NPLAGC P+LLQ+PV A++ + Sbjct: 61 PLMQKRMAEIKERYKDDP-QKQQEEMVNVQKEFG-NPLAGCLPLLLQMPVLLALFATLR 117 Score = 58.1 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 7/112 (6%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFA 530 G + + I +S++ +S + + Q + PV+F Sbjct: 253 LGRVGAIDPDGKIHWDIVGMIIFFGISLYFSQMLSGQNSSGGNPQQETVNKITPVIFSGM 312 Query: 531 LSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 FP AG+++Y NV +Q ++ + E + ++ + K + Sbjct: 313 FLFFPLPAGVLMYMVIGNVFQTLQTYILSREPLPEE--LQKIVAIQEKEKQA 362 >gi|12841194|dbj|BAB25113.1| unnamed protein product [Mus musculus] Length = 433 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 88/224 (39%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ Y + +L + AI TV + L FPL K A + N P++ + + + Sbjct: 120 IQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIR 179 Query: 405 QSPPQVLQKA-------MIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ Q M + K H+I L L PVF A+ ++ ++ + Sbjct: 180 EAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTHAPVFISFFIALREMANLPVPS 239 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP + P++++ +M+ +++ Sbjct: 240 LQTGGLWWFQDLTVSDPIYVL-------------------PLVVTATMWCVLELGAETGV 280 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 281 QSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|159027290|emb|CAO89385.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 382 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +F+ +V ++G AI+ T+ V+ FPL+ Q + M+ Q Sbjct: 1 MDFGVGFISTNIMLPILDFFFRIVHSYGFAIIALTLVVRFAVFPLSAGQIRNMRKMRITQ 60 Query: 394 PKID----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E+++++K P Q Q+ M +L + NPLAGC P+LLQ+P+ A++ + Sbjct: 61 PLMKERQAEIQQRYKNDP-QKQQEEMGKLMQELG-NPLAGCLPLLLQMPILLALFATLR 117 Score = 57.3 bits (137), Expect = 7e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 43/102 (42%), Gaps = 12/102 (11%) Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPAD-----KGQAMILNWMPVVFVFALSSFP--AGLI 539 + I +S+++ ++S A + Q + P++F FP AG++ Sbjct: 266 HWDILAMVIAFGISIYVNQELSGAGAPSGGAAQQQQTVNKITPIIFSMMFLFFPLPAGVL 325 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +Y +N+ +Q ++M+ L + L+ ++ ++ Sbjct: 326 MYILTANIFQTIQTVILMR-----EPLPENLQKLVAEQEKTE 362 >gi|166363143|ref|YP_001655416.1| putative inner membrane protein translocase component YidC [Microcystis aeruginosa NIES-843] gi|166085516|dbj|BAG00224.1| inner membrane protein [Microcystis aeruginosa NIES-843] Length = 382 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 13/175 (7%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +F+ +V ++G AI+ T+ V+ FPL+ Q + M+ Q Sbjct: 1 MDFGVGFISTNIMLPILDFFFRIVHSYGFAIIALTLVVRFAVFPLSAGQIRNMRKMRITQ 60 Query: 394 PKID----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P + E+++++K P Q Q+ M +L + NPLAGC P+LLQ+P+ A++ + Sbjct: 61 PLMKERQTEIQQRYKNDP-QKQQEEMGKLMQELG-NPLAGCLPLLLQMPILLALFATLRG 118 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV---GIWPIIMSLSM 501 S + DL I + L P +++ +PI L Sbjct: 119 SPF----SDINYTVDLQVLPSEQIAMVQRQLYATKPQNVYIDESLHYPITAFLPQ 169 Score = 56.9 bits (136), Expect = 9e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 43/102 (42%), Gaps = 12/102 (11%) Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPAD-----KGQAMILNWMPVVFVFALSSFP--AGLI 539 + I +S+++ ++S A + Q + P++F FP AG++ Sbjct: 266 HWDILAMVIAFGISIYVNQELSGAGAPSGGAAQQQQTVNKITPIIFSMMFLFFPLPAGVL 325 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +Y +N+ +Q ++M+ L + L+ ++ ++ Sbjct: 326 MYILTANIFQTIQTVILMR-----EPLPENLQKLVAEQEKTE 362 >gi|317488566|ref|ZP_07947111.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp. 1_3_56FAA] gi|316912308|gb|EFV33872.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp. 1_3_56FAA] Length = 663 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 24/224 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F +I +P Y+L G++ +AI+L TV +K++ PL+ ++ M I P+++ Sbjct: 9 FSYIVQPC-------YDLTGSWWMAILLFTVIIKIVLMPLSLWCQWNSIVMVKIMPELNR 61 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAP 457 ++ K+ + + + L K H+ +PL P+ QI V F + +VI I+ Sbjct: 62 IKVKYFGD-AETIGEKQTLLNKKHHYHPLLSLIPLAAQILVLFGLVEVIHGITDHGAPGT 120 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + + + + I L L + GF I P+ Q KM + Sbjct: 121 EFLGMVPIEDGGLSWIMPLLAGLSAVVMGFAQNRINPL-----QREQSKMEKNTTN---- 171 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA---VIMK 558 V+ + AG+ YW SN+++IV QA +IM+ Sbjct: 172 ---GLSIVLSLVLGVYVAAGMAFYWICSNLMAIVVQALCNLIMR 212 >gi|290960105|ref|YP_003491287.1| membrane-protein-insertion protein [Streptomyces scabiei 87.22] gi|260649631|emb|CBG72746.1| putative membrane-protein-insertion protein [Streptomyces scabiei 87.22] Length = 279 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 35/242 (14%) Query: 350 MSYFYNLVGNFG-------------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 MS F +LVG+ AI+L T V+LL PL++ +QP+I Sbjct: 1 MSVFADLVGHLADLLQPLFHASATAFAIILFTALVRLLVHPLSRAAARGQRARVALQPQI 60 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ELR+K ++P + LQKAM++L+ ++PL+GC P L Q+P FF +Y + S A Sbjct: 61 AELRKKHAKNP-EKLQKAMMELHTKEKVSPLSGCLPSLCQLPAFFLLYHLFSNRTIGGEA 119 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLP-GFMHVGIWPIIMSLSMF---IQMKMSP--- 509 K AA G + P G +++G++ I+ ++ F +M Sbjct: 120 NALLTHKLFAAPLGDRWHDALGEGGLFGPQGLVYLGLFVIVAGVATFNFRRTKRMMAAGT 179 Query: 510 -----------PPADKGQAMILNWMPVVFVFALSS---FPAGLIIYWSWSNVISIVQQAV 555 P + +MP + F L S P +Y S S V++A+ Sbjct: 180 AGMPAVSDDQVPGMAASMGAVSKFMPFMSFFTLLSVAVVPLAAALYVVTSTTWSAVERAL 239 Query: 556 IM 557 + Sbjct: 240 LY 241 >gi|284052519|ref|ZP_06382729.1| putative inner membrane protein translocase component YidC [Arthrospira platensis str. Paraca] gi|291572001|dbj|BAI94273.1| putative inner membrane protein [Arthrospira platensis NIES-39] Length = 390 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 68/119 (57%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + MK Q Sbjct: 1 MDFGIGFLSNNLMLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSIRNMRRMKVTQ 60 Query: 394 PKIDE----LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E +++ +K P + ++ M ++YK NPLAGC+P+LLQ+P+ FA++ + Sbjct: 61 PLMKERVDKIQKLYKDDPVK-QREEMSRVYKELG-NPLAGCFPLLLQMPILFALFATLR 117 Score = 54.2 bits (129), Expect = 6e-05, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 11/110 (10%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DKGQAMILNWMPVVFV- 528 G + + +S++I +S + Q + PV+F Sbjct: 253 LGRVGAFDDDGNIHWDIVGMILGFGISLYINQVLSGQNQAGSGNPQQDTVNKITPVLFTG 312 Query: 529 -FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 F PAG+++Y +N+ Q ++ + L + L+ ++ Sbjct: 313 MFFFFPLPAGVLLYMLIANIFQTGQAFILSR-----EPLPENLQKIVEES 357 >gi|274318365|ref|NP_001162055.1| oxidase assembly 1-like [Rattus norvegicus] gi|149063882|gb|EDM14152.1| rCG23545, isoform CRA_c [Rattus norvegicus] Length = 433 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 86/224 (38%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ Y + +L + AI TV + L FPL K A + N P++ + + + Sbjct: 120 IQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIR 179 Query: 405 QSPPQVLQKA-------MIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ Q M K H+I L Q P+F A+ ++ ++ + Sbjct: 180 EAKLSGDQAEFYKATIEMTHYQKKHDIKFFRPLILPLTQAPIFISFFIALREMANLPVPS 239 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP + P++++ +M+ +++ Sbjct: 240 LQTGGLWWFQDLTVSDPIYVL-------------------PLVVTATMWGVLELGAETGM 280 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ MP+ + FP+ + +YW SNV S+ Q Sbjct: 281 QSSDLQLMRNVIRVMPLAVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|307705543|ref|ZP_07642395.1| membrane protein oxaA 1 [Streptococcus mitis SK597] gi|307620820|gb|EFN99904.1| membrane protein oxaA 1 [Streptococcus mitis SK597] Length = 308 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 101/255 (39%), Gaps = 34/255 (13%) Query: 337 GWFY-FIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 G+ + I PM + YF G FG+AI++ T+ V+L+ PL Q + M Sbjct: 35 GFIWNTIGAPMAEAIKYFATDQGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMN 94 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++ ++ + + K++ Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 95 ALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A + G +P P + ++ L + Sbjct: 155 FAAQHTEGVAQASYLG-------------------IPLGSPSMILAACAGVLYYLQSLLS 195 Query: 505 MKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + Q + PV+ PA + +YW + I+QQ ++ + Sbjct: 196 LHGVEDETQRDQIKKMAYVSPVMIAGFSLISPASVTLYWVVGGFMMILQQFIVN--YIVR 253 Query: 564 IGLIDRLRSTFSKNY 578 L ++R +KN Sbjct: 254 PKLRKKVREELAKNP 268 >gi|322377609|ref|ZP_08052099.1| SpoIIIJ family protein [Streptococcus sp. M334] gi|321281374|gb|EFX58384.1| SpoIIIJ family protein [Streptococcus sp. M334] Length = 308 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 102/255 (40%), Gaps = 34/255 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV----STANMK 390 + W F A PM + YF G FG+AI++ T+ V+L+ PL Q + M Sbjct: 36 FIWNTFGA-PMAEAIKYFATDQGLGFGVAIIIVTIIVRLIILPLGIYQSWKATLHSEKMN 94 Query: 391 NIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 ++ ++ + + K++ Q Q+A+ K H I+ G C+PILLQ+P F AIY Sbjct: 95 ALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIY 154 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + A + G +P P + V ++ L + Sbjct: 155 FAAQHTEGVAQASYLG-------------------IPLGSPSMILVACAGVLYYLQSLLS 195 Query: 505 MKMSPPPADKGQ-AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + Q + P+ V PA + +YW + I+QQ ++ + Sbjct: 196 LHGVEDETQREQIKKMAYVSPITIVVFSLISPASVTLYWVVGGFMMILQQFIVN--YIVR 253 Query: 564 IGLIDRLRSTFSKNY 578 L ++R +KN Sbjct: 254 PKLRKKVREELAKNP 268 >gi|70725620|ref|YP_252534.1| hypothetical protein SH0619 [Staphylococcus haemolyticus JCSC1435] gi|68446344|dbj|BAE03928.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 277 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 112/262 (42%), Gaps = 36/262 (13%) Query: 337 GWFYFI-AKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM----K 390 G+FY I KPM ML+ + N+G+AI++ + ++L+ PL Q + M + Sbjct: 29 GFFYTIFVKPMDMLLHFLGRTFHENYGLAIIVIVLIIRLVLMPLMFIQVKNIHIMRGKTQ 88 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAI 443 ++P+I++L++K K + Q K +++ Y + INP G PIL+QIP+ + Sbjct: 89 VVKPEIEKLQDKLKNADTQEERTAANKLLMKKYNDYGINPFKSLVGTLPILIQIPILLGL 148 Query: 444 YKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 Y I + P + W I T L +++ ++ +P + Sbjct: 149 YACIKYPTSGGIIEHPHFLWFN---LMHTDLIMTFIAALLYFIQPLVNAMHYPKEERRTY 205 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ ++ P+ ++A + L +YW+ S I+Q H Sbjct: 206 YV---------------MMVLSPLFIIYASLQSASALSLYWAISATFLIIQMHFAH-SHY 249 Query: 562 AEIGLI--DRLRSTFSKNYNSQ 581 A++G ++L+ + ++ Sbjct: 250 AKVGKAAGEQLKRQIEQQRQNK 271 >gi|217033105|ref|ZP_03438569.1| hypothetical protein HPB128_27g12 [Helicobacter pylori B128] gi|216945178|gb|EEC23869.1| hypothetical protein HPB128_27g12 [Helicobacter pylori B128] Length = 369 Score = 117 bits (294), Expect = 5e-24, Method: Composition-based stats. Identities = 70/389 (17%), Positives = 128/389 (32%), Gaps = 59/389 (15%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIE---EMNNERKNIQTVKQPNQVDNSYAAVLID 59 N N +AIALS + + + F+ P E N T PN + A I Sbjct: 5 NNTNLILAIALSFLFIALYSYFFQKPNKPTTQTTKQETTNNHTATSPNAPNAFSATQTIP 64 Query: 60 DRAQALSMS---PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLS 112 ++S R+E+ + + + L+ + L S Sbjct: 65 QENLLSAISFEHARIEIDSL----------GRIKQVYLKDKKYLTPKQKGFLEHVGHLFS 114 Query: 113 PSNTKNAYFAELDYVSTANNIEL-----------PNSNTVWNLISGKILTPTTPIKLVFK 161 EL ++ L NT ++ S L P + L Sbjct: 115 SKENMQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYS-ASKTTLGPNEQLVLTQD 173 Query: 162 NANNILFERTISLDE--HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 +T++ + HY KI NN ++P +++ G Sbjct: 174 LGA-FTIIKTLTFYDDLHYDLKIAFKSPNN-----LIPSYVITNGYRPVADLDSY-TFSG 226 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + DK + + + D ++ I F + +L D+Y+ ++ F + S Sbjct: 227 VLLENNDKKIEKIEDKDAKE--IKRFSNTL-FLSSVDRYFTTLLFTKDPQGFEALID--S 281 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 + + F + + G K++ ++ P +I++G Sbjct: 282 EIGTKNPLGFIS--------LKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLI 328 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 F AK +F+L+ Y Y VGN+G AI+ T Sbjct: 329 TFFAKGVFVLLDYLYQFVGNWGWAIIFLT 357 >gi|209527903|ref|ZP_03276391.1| 60 kDa inner membrane insertion protein [Arthrospira maxima CS-328] gi|209491658|gb|EDZ92025.1| 60 kDa inner membrane insertion protein [Arthrospira maxima CS-328] Length = 391 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 68/119 (57%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + MK Q Sbjct: 1 MDFGIGFLSNNLMLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSIRNMRRMKVTQ 60 Query: 394 PKIDE----LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E +++ +K P + ++ M ++YK NPLAGC+P+LLQ+P+ FA++ + Sbjct: 61 PLMKERVDKIQKLYKDDPVK-QREEMSRVYKELG-NPLAGCFPLLLQMPILFALFATLR 117 Score = 54.2 bits (129), Expect = 6e-05, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 38/112 (33%), Gaps = 11/112 (9%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DKGQAMILNWMPVVFV- 528 G + + +S++I +S + Q + PV+F Sbjct: 253 LGRVGAFDDDGNIHWDIVGMILGFGISLYINQVLSGQNQGSSGNPQQDTVNKITPVLFTG 312 Query: 529 -FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 F PAG+++Y +N+ Q ++ + L + L+ ++ Sbjct: 313 MFFFFPLPAGVLLYMLIANIFQTGQAFILSR-----EPLPENLQKIVEESER 359 >gi|170077612|ref|YP_001734250.1| putative inner membrane protein translocase component YidC [Synechococcus sp. PCC 7002] gi|169885281|gb|ACA98994.1| inner membrane protein YidC/OxaA [Synechococcus sp. PCC 7002] Length = 388 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ K S K Q Sbjct: 1 MDFGIGFLSNNVMLPILDFFYGIVPSYGFAIIALTLVIRFAVYPLSAKSIRSMRRTKITQ 60 Query: 394 PKID----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E++E++K P + Q AM ++YK NPLAGC PILLQ+P+ FA++ + Sbjct: 61 PLMQKRVKEIQERYKNDPAK-QQAAMSEVYKEFG-NPLAGCLPILLQMPILFALFATLR 117 Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 37/108 (34%), Gaps = 18/108 (16%) Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQA-----------MILNWMPVVFVFALSSFP 535 + + +S++I +S + P++F FP Sbjct: 265 HWDILGMVLFFGVSLYINQTISGGAPSSNNNSGGDQQQQAQQTVNKITPLIFSGMFLFFP 324 Query: 536 --AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 AG+++Y + +N VQ ++ K L + L+ + S+ Sbjct: 325 LPAGVLMYMTIANAFQTVQTFILTK-----EPLPENLQKLVDEQEKSE 367 >gi|260437685|ref|ZP_05791501.1| inner membrane protein OxaA [Butyrivibrio crossotus DSM 2876] gi|292809911|gb|EFF69116.1| inner membrane protein OxaA [Butyrivibrio crossotus DSM 2876] Length = 415 Score = 117 bits (292), Expect = 6e-24, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 103/301 (34%), Gaps = 91/301 (30%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNF--------------GIAIMLTTVFVKLLFFPLAKKQ 382 G+ IA + + + +NL+ N GI+++L T+ V+L+ P+ KQ Sbjct: 9 GFLKPIAWLLGQIFNGLFNLIYNIAEWFTDKPYHVPIIGISVILFTIIVRLILLPMTIKQ 68 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIP 438 + + P++ E++ K+K QV +Q +Y+ + +P GC +L+Q+P Sbjct: 69 QKFSKLSGLMNPELQEIQAKYKDKRDQVSMMNMQAETKAVYEKYGTSPTGGCLTMLIQLP 128 Query: 439 VFFAIYKVISISLEMR--------------------------------------HAPFWG 460 + FA+Y+VI A Sbjct: 129 IMFALYRVIYKIPGYVTKIRELCGGIADKITGSGDDWATKLDAINGISVSASTGKATLID 188 Query: 461 WIKDLAAADPTNIFTLFGILPFY-------------------LPGFMHVGIW--PIIMSL 499 I +L+ + + F + F PG+ PI+ L Sbjct: 189 KIYNLSPEKWSEVQNAFSSVDFGNAYDQIHGYNNLFGISLTQAPGWRLSWALIIPILAGL 248 Query: 500 SMFIQMKMS--------------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + ++ +K+ ++ MP++ SF + + +YW S Sbjct: 249 TQWLSVKLMENKNNVNVGSQNDQQAGMASSMKVMNTIMPILSAVFCVSFASCIGLYWIAS 308 Query: 546 N 546 + Sbjct: 309 S 309 >gi|291319996|ref|YP_003515254.1| hypothetical protein MAGa0630 [Mycoplasma agalactiae] gi|290752325|emb|CBH40296.1| Conserved hypothetical protein [Mycoplasma agalactiae] Length = 715 Score = 117 bits (292), Expect = 7e-24, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 11/238 (4%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV--KLLFFPLAKKQYVSTANMKNIQ 393 +G F + +S + +G +G I++ + + + + KQ V+ + + ++ Sbjct: 465 YGLLVFPTAWLSAHLSTSLSHLGGWGTIIVILVLTIILRSAMLAVTFKQTVNQSKQEELK 524 Query: 394 ---PKIDELREKFKQSPPQV--LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 KID FK + Q+ + +LYK H INPL +++ +PVF +++VI Sbjct: 525 SKKAKIDAKYADFKNNKQMKARQQQEVAELYKKHGINPLDAFVTMIISLPVFIMMWRVIQ 584 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNI---FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ- 504 E + + G + + G+L P I++ F + Sbjct: 585 SLPEFKSTVWLGLSFAETSWRRLFFSGEWQYLGLLVVVAAVQGVAQFLPQILNRKKFKER 644 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + A K M +VF F F AGL +YW S + +I+Q I K + Sbjct: 645 TSLEEEKALKKANRTQRIMTIVFFFITLIFSAGLQVYWIISGIWTIIQTLSIHKFKKS 702 >gi|239941533|ref|ZP_04693470.1| hypothetical protein SrosN15_11094 [Streptomyces roseosporus NRRL 15998] gi|239987998|ref|ZP_04708662.1| hypothetical protein SrosN1_11878 [Streptomyces roseosporus NRRL 11379] Length = 256 Score = 117 bits (292), Expect = 7e-24, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 34/228 (14%) Query: 346 MFMLMSYFYNLVGNFG-------------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 M MS F +LVG+ AI+L T V+L PL++ + Sbjct: 1 MSAFMSAFASLVGSLADLLQPLFQTASTAAAIILFTALVRLAVHPLSRAAARGQKARSRL 60 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP+I ELR+K ++P + +QKA+++L+ ++PL+GC P LLQ+P FF +Y + S S Sbjct: 61 QPQIAELRKKHGRNP-ERMQKAIMELHAAEKVSPLSGCLPSLLQMPAFFLLYHLFSSS-S 118 Query: 453 MRHAPFWGWIKDLAAADPTNIF--TLFGILPFYLPGFMHVGIWPIIMSLSMFI------Q 504 + P DL A + L PF G +++G++ I+ +++ F Q Sbjct: 119 IGGEPNALLSHDLLGAPLGGRWHDALAHGGPFGGQGLVYLGLFVIVAAVATFSYGRTKRQ 178 Query: 505 MKMSPPPAD--------KGQAMILNWMPVVFVFALSS---FPAGLIIY 541 M +P G + MP++ F L + P +Y Sbjct: 179 MAANPMTPAAGPDGQPVPGMGAMTKLMPLLSFFTLITVAVVPLAAALY 226 >gi|282917439|ref|ZP_06325192.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus D139] gi|282318641|gb|EFB48998.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus D139] Length = 207 Score = 117 bits (292), Expect = 8e-24, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 91/205 (44%), Gaps = 29/205 (14%) Query: 384 VSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINP---LAGCWPILLQ 436 + MK +P++++++EK K++ Q + ++Q+YK +++NP + GC P+L+Q Sbjct: 1 MMRQKMKVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQ 60 Query: 437 IPVFFAIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +P+ +Y V+ L + P + W DL D I + G+L F Sbjct: 61 LPIIMGLYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF------------ 106 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 + ++ K P + M++ P++ ++ S + L +YWS S +VQ Sbjct: 107 ----IQAYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTH 162 Query: 555 V--IMKMHGAEIGLIDRLRSTFSKN 577 I A+ + + + ++ Sbjct: 163 FANIYYEKVAKKEVQPFIEAYEREH 187 >gi|241896112|ref|ZP_04783408.1| Oxa1 family cytochrome oxidase biogenesis protein [Weissella paramesenteroides ATCC 33313] gi|241870626|gb|EER74377.1| Oxa1 family cytochrome oxidase biogenesis protein [Weissella paramesenteroides ATCC 33313] Length = 315 Score = 117 bits (292), Expect = 8e-24, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 117/265 (44%), Gaps = 39/265 (14%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 G F+ P+ M++ + +G G +I++ T+ V+L+ P+ Q M Sbjct: 21 GHADFLKSPLTDFMNWSESTIGGVNAVGWSIIILTLAVRLILLPMMVHQQRNATIQQEKM 80 Query: 390 KNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAGC--WPILLQIPVFFAI 443 + +QP++ ++++ K + Q Q +AM+ +Y+ +N++ L G +++Q P+F + Sbjct: 81 RLLQPQLKKVQDAQKNAQTQEEQLLASQAMMTIYRENNVSLLGGMNFTTLIIQWPIFMGL 140 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ HA F+G +L++ P I + + + + ++ + P M + Sbjct: 141 YSAIRYSNEIAHASFFGI--NLSSHAP--ILAIATAVAYGIQAYLSIIGVPAEQKKQMQM 196 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM------ 557 M + P + + + AG+ +Y+ ++ I+Q +I+ Sbjct: 197 MMYVMPVMM------------LFMTWVTN---AGIALYFFAGALVMILQTLIIIVWRPKL 241 Query: 558 KMHGAEI-GLIDRLRSTFSKNYNSQ 581 K H AE + D + + S+ Sbjct: 242 KAHVAETFEVKDVVDDALAGKIKSK 266 >gi|325473999|gb|EGC77187.1| inner membrane protein [Treponema denticola F0402] Length = 521 Score = 116 bits (291), Expect = 8e-24, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 21/235 (8%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF-----GIAIMLTTVFVKLLFFPLAKKQYVSTAN----M 389 + P++M + + + L N G +I+L ++ V ++ P+ Sbjct: 6 YMIFIYPVYMFVEFVFFLANNITDDYIGASIVLLSIIVNIICLPIYNVAETWQKKERDIQ 65 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K ++PK ++R F ++ A + H + L G +P+L+QIP FFA YK++S Sbjct: 66 KKLKPKTKDIRAVFSGDERYMILSAYYRQNNYHPLYALRGIFPLLIQIPFFFAAYKLLSN 125 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + +A FW +KDL D G +++ PI+M++ + Sbjct: 126 LPLLNNASFWF-LKDLGKPDQ-----------LLNIGGIYINFLPILMTIINISASAVYS 173 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + + L VF+ L + P+GL++YW+ +N+ S+++ I Sbjct: 174 KGLSLKEKIQLYLTAAVFLILLYNSPSGLVLYWTLNNLFSLLKNIFYRVRLDKRI 228 >gi|241890041|ref|ZP_04777339.1| stage III sporulation protein J [Gemella haemolysans ATCC 10379] gi|241863663|gb|EER68047.1| stage III sporulation protein J [Gemella haemolysans ATCC 10379] Length = 297 Score = 116 bits (291), Expect = 8e-24, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 93/249 (37%), Gaps = 46/249 (18%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ---- 393 ++ KPM + +S + G++G +I++ T+ ++LL P Y + Q Sbjct: 31 FYDIFVKPMDLSLSKIHEYTGSWGWSIVIITLVIRLLVLPFMLNNYKVQNKSRKGQELAR 90 Query: 394 PKIDELREKFKQSPPQV------------------LQKAMIQLYKTHNINPLA--GCWPI 433 P+++ L++K + + + LQ+ + + K ++ PL+ GC P+ Sbjct: 91 PELEVLQKKQQAAKEKEARAISNEEKMQARSELMELQREQMAILKKYDAMPLSLGGCLPM 150 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+ +P ++ +S L I D N+ T LP Sbjct: 151 LIPLPFLTGLFYTLSNPLYSAG------IIDSTFLGVFNLGTRSYTLPIIA--------- 195 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMIL-------NWMPVVFVFALSSFPAGLIIYWSWSN 546 ++ ++ IQM + P P GQ + P++ + +Y+ Sbjct: 196 FVVYAIQTKIQMSLMPTPTQPGQEQMQSQMKMMQWLSPIMITGFSFWVAGAVAVYYIVGG 255 Query: 547 VISIVQQAV 555 + I Q + Sbjct: 256 LFMIFQTYL 264 >gi|2988415|gb|AAC08053.1| 60K inner-membrane protein homolog [Treponema pallidum] Length = 167 Score = 116 bits (291), Expect = 9e-24, Method: Composition-based stats. Identities = 51/165 (30%), Positives = 94/165 (56%), Gaps = 10/165 (6%) Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++E++K + Q + + M LY+ NPL+GC P L+Q+P+ FA+Y++ + E R A F Sbjct: 1 IQERYKGN-TQKIHEEMAXLYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMF 59 Query: 459 W-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 WI DL+ AD +++TL LP + + + + P++ +S + K++ P + Q Sbjct: 60 IPYWIPDLSLAD--SVWTLPFALP--VTQWTQMRMLPVLYVVSQIMFSKLTQVPHTEQQK 115 Query: 518 ----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ MP+ F F P+GL++YW+ N +++VQQ V+ + Sbjct: 116 TSMTIMTYVMPLFFFFFFYDAPSGLLVYWTAMNGVTLVQQLVMKR 160 >gi|321475104|gb|EFX86068.1| hypothetical protein DAPPUDRAFT_193442 [Daphnia pulex] Length = 444 Score = 116 bits (291), Expect = 9e-24, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 84/230 (36%), Gaps = 37/230 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + ++ + + + + I + V+ L FPL K + A M N P++ L++K Sbjct: 141 IQSILEWLHIGVDLPWWGCIAIGVFTVRTLMFPLVIKAQRNAAKMTNNMPQLQVLQQKMT 200 Query: 405 QSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPV----FFAIYKVISISLEM 453 + + + K +NPL L+Q PV FFA+ + + +E Sbjct: 201 DARQAGNAMEAARMGYEIQSFMKEKGLNPLKNLMVPLIQAPVFMSFFFALKGMANAPVES 260 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W DL DP I P++ S++++ M++ A Sbjct: 261 MQYGGLFWFSDLTVCDPYYIL-------------------PMLTSVTVWATMELGADSAK 301 Query: 514 KGQA------MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +P + +F ++ YW +NVIS+VQ + Sbjct: 302 LSSQGFPLLIYFFRAIPFIMFPITMNFSGAILCYWLTTNVISLVQVGFLR 351 >gi|148377328|ref|YP_001256204.1| putative inner membrane protein translocase component YidC [Mycoplasma agalactiae PG2] gi|148291374|emb|CAL58757.1| Conserved hypothetical protein [Mycoplasma agalactiae PG2] Length = 715 Score = 116 bits (291), Expect = 9e-24, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 11/238 (4%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV--KLLFFPLAKKQYVSTANMKNIQ 393 +G F + +S + +G +G I++ + + + + KQ V+ + + ++ Sbjct: 465 YGLLVFPTAWLSAHLSTSLSHLGGWGTIIVILVLTIILRSAMLAVTFKQTVNQSKQEELK 524 Query: 394 ---PKIDELREKFKQSPPQV--LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 KID FK + Q+ + +LYK H INPL +++ +PVF +++VI Sbjct: 525 SKKAKIDAKYADFKNNKQMKARQQQEVAELYKKHGINPLDAFVTMIISLPVFIMMWRVIQ 584 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNI---FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ- 504 E + + G + + G+L P I++ F + Sbjct: 585 SLPEFKSTVWLGLSFAETSWRRLFFSGEWQYLGLLVVVAAVQGVAQFLPQILNRKKFKER 644 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + A K M +VF F F AGL +YW S + +I+Q I K + Sbjct: 645 TSLEEEKALKKANRTQRIMTIVFFFITLIFSAGLQVYWIISGIWTIIQTLSIHKFKKS 702 >gi|326779124|ref|ZP_08238389.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf. griseus XylebKG-1] gi|326659457|gb|EGE44303.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf. griseus XylebKG-1] Length = 256 Score = 116 bits (291), Expect = 9e-24, Method: Composition-based stats. Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 32/227 (14%) Query: 346 MFMLMSYFYNLVGNFG-------------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 M MS F +LVG+ AI+L T V+L PL++ + Sbjct: 1 MSAFMSAFASLVGSLADLLQPFFQTASTAAAIVLFTALVRLAVHPLSRAAARGQKARSRL 60 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP+I ELR+K ++P + +QKA+++L+ ++PL+GC P LLQ+P FF +Y + S Sbjct: 61 QPQIAELRKKHGKNP-ERMQKAIMELHAAEKVSPLSGCLPSLLQMPAFFLLYHLFSSGSI 119 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGI-LPFYLPGFMHVGIWPIIMSLSMFIQMK----- 506 L A G F G++++G++ I+ +++ F + Sbjct: 120 GGEPNALLSHDLLGAPLGGRWHDALGNGGMFGAQGWVYLGLFAIVTAVATFNYGRTKRQL 179 Query: 507 ----MSPP-----PADKGQAMILNWMPVVFVFALSS---FPAGLIIY 541 M+P A G + MP++ F L + P +Y Sbjct: 180 AANPMTPAAGPDGQAVPGMGAMAKVMPLMSFFTLITVAVVPLAAALY 226 >gi|88607139|ref|YP_505134.1| hypothetical protein APH_0541 [Anaplasma phagocytophilum HZ] gi|88598202|gb|ABD43672.1| putative membrane protein [Anaplasma phagocytophilum HZ] Length = 122 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 47/116 (40%), Positives = 77/116 (66%), Gaps = 1/116 (0%) Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 GAKE + Y+ L IP F+ +D+G YFI KP+F+L+ YF+ L+GNFG+AI++ TV Sbjct: 2 GAKELELLDQYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQYFHKLLGNFGLAIVMLTVA 61 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 +KL+ FPL+ + YVS +K +QP++ ++E +K + + K + L+K H ++P Sbjct: 62 IKLVAFPLSMRSYVSMFKLKRLQPEVLRIKELYKTDDLR-ISKEIASLFKKHKVSP 116 >gi|182438478|ref|YP_001826197.1| hypothetical protein SGR_4685 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466994|dbj|BAG21514.1| putative membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 256 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 32/227 (14%) Query: 346 MFMLMSYFYNLVGNFG-------------IAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 M MS F +LVG+ AI+L T V+L PL++ + Sbjct: 1 MSAFMSAFASLVGSLADLLQPFFQTASTAAAIVLFTALVRLAVHPLSRAAARGQKARSRL 60 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP+I ELR+K ++P + +QKA+++L+ ++PL+GC P LLQ+P FF +Y + S Sbjct: 61 QPQIAELRKKHGKNP-EKMQKAIMELHAAEKVSPLSGCLPSLLQMPAFFLLYHLFSSGSI 119 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGI-LPFYLPGFMHVGIWPIIMSLSMFIQMK----- 506 L A G F G++++G++ I+ +++ F + Sbjct: 120 GGEPNALLSHDLLGAPLGGRWHDALGNGGMFGAQGWVYLGLFAIVTAVATFNYGRTKRQL 179 Query: 507 ----MSPP-----PADKGQAMILNWMPVVFVFALSS---FPAGLIIY 541 M+P A G + MP++ F L + P +Y Sbjct: 180 AANPMTPAAGPDGQAVPGMGAMAKVMPLMSFFTLITVAVVPLAAALY 226 >gi|167957434|ref|ZP_02544508.1| putative inner membrane protein translocase component YidC [candidate division TM7 single-cell isolate TM7c] Length = 267 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 117/264 (44%), Gaps = 43/264 (16%) Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + +P+F L+ Y++V G+FG+A+++ T+ ++++ +PL KQ M+ IQP+ Sbjct: 4 FDLIVVQPIFNLLMALYSIVPGGDFGVAVIIFTILIRIIMWPLISKQLHQVKIMRKIQPE 63 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 +D ++++ K + Q+ M+++YK +NI+P L+Q+P+FF +Y+VI I R Sbjct: 64 LDRIKKQAKGN-RQMQGMMMLEVYKKYNISPFRSIGLTLIQLPIFFGLYRVIQIFTMHRG 122 Query: 456 A---------PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS------ 500 + +L A LFG + + GI P++++L+ Sbjct: 123 DLGKYTYNLLENIPAVSNLIANPNNFNNKLFGFVDLTVQAIGKSGISPLLLALAIGAGIM 182 Query: 501 MFIQMKMSPPPADKG-------------------------QAMILNWMPVVFVFALSSFP 535 +I K + P ++ +MP++ + + P Sbjct: 183 QYISSKQTMPQKQTKKGLRQIMAEAAEGKEADSSEMNAAVMQKMVKFMPIMLTLIMVNLP 242 Query: 536 AGLIIYWSWSNVISIVQQAVIMKM 559 + +Y +++VQQ K Sbjct: 243 GAIALYSCTFTAVAVVQQHFFAKK 266 >gi|254423008|ref|ZP_05036726.1| 60Kd inner membrane protein [Synechococcus sp. PCC 7335] gi|196190497|gb|EDX85461.1| 60Kd inner membrane protein [Synechococcus sp. PCC 7335] Length = 434 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 68/119 (57%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN-- 391 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + MK Sbjct: 1 MDFGIGFLSNNVMLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSIRNMRKMKIAN 60 Query: 392 --IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 +Q ++ E++E++K P + Q+ + +Y NPLAGC+P++LQ+P+ FA++ + Sbjct: 61 PLMQKRMAEVKERYKDDPVK-QQEEIKDIYSEFG-NPLAGCFPVVLQMPILFALFATLR 117 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 10/103 (9%) Query: 487 FMHVGIWPIIMSLSMFIQMKM-------SPPPADKGQAMILNWMPVVFVFALSSFP--AG 537 + I LS+++ ++ SP + Q I + P++F FP AG Sbjct: 268 HWDILGMIIFFGLSLYVSQQVTNSGNAASPDGQNDQQQAIAKFTPIIFSGMFLFFPLPAG 327 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 +++Y +NV Q ++ + E L + + K +S Sbjct: 328 VLMYMVIANVFQTAQSFILSREPLPE-NLQKLVDAQEKKAASS 369 >gi|148704412|gb|EDL36359.1| oxidase assembly 1-like, isoform CRA_c [Mus musculus] Length = 411 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 35/216 (16%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F L + AI TV + L FPL K A + N P++ + + +++ Q Sbjct: 106 FTELGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQ 165 Query: 413 KA-------MIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGW 461 M + K H+I L L Q PVF A+ ++ ++ + W Sbjct: 166 AEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVPSLQTGGLWW 225 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----Q 516 +DL +DP + P++++ +M+ +++ + Sbjct: 226 FQDLTVSDPIYVL-------------------PLVVTATMWCVLELGAETGVQSNDLQFM 266 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 267 RNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 302 >gi|225376872|ref|ZP_03754093.1| hypothetical protein ROSEINA2194_02514 [Roseburia inulinivorans DSM 16841] gi|225211193|gb|EEG93547.1| hypothetical protein ROSEINA2194_02514 [Roseburia inulinivorans DSM 16841] Length = 699 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 106/280 (37%), Gaps = 59/280 (21%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 P+ +M Y LV N+G++I+L T+ K++ P++ ++ M IQP+I+E++ Sbjct: 9 FGIPLGYVMWGCYQLVKNYGLSIILFTLVSKIVMLPVSIMVQKNSIRMIQIQPQINEIKY 68 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL---------- 451 K ++ ++L+K + +P+ G P+LLQIP+ + VI + Sbjct: 69 KHAGDKDRIA-DEQMELFKKAHYSPMLGMVPMLLQIPLVLGLINVIYNPMQHLMHIKTSV 127 Query: 452 ---------------EMRHAPFWGWIKDLAAADPTNIF---------------------- 474 ++ + L D + F Sbjct: 128 CDQIVAATCSLMGVDQLGSGAQLQAMAALQNPDNLSFFQNALTGTGIDIEAIAAQAATIN 187 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQM------KMSPPPADKGQAMILNWMPVVFV 528 T F L + + V W +++ L + + K Q + W +F Sbjct: 188 THFLGLDLSVVPHITVLAWILLIPLFSCLSTVLLCACQNQANVLQKEQGALGQWGVTIFT 247 Query: 529 FALSSF-----PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 A S++ P G+ +YW +SN+ S ++ ++ + Sbjct: 248 VAFSTYFTFLVPGGVGLYWIFSNLFSTALIYILNAVYNPK 287 >gi|56750083|ref|YP_170784.1| putative inner membrane protein translocase component YidC [Synechococcus elongatus PCC 6301] gi|81300426|ref|YP_400634.1| putative inner membrane protein translocase component YidC [Synechococcus elongatus PCC 7942] gi|56685042|dbj|BAD78264.1| preprotein translocase YidC subunit [Synechococcus elongatus PCC 6301] gi|81169307|gb|ABB57647.1| inner membrane protein-like [Synechococcus elongatus PCC 7942] Length = 392 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 70/119 (58%), Gaps = 6/119 (5%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + + M ++ +FY LV ++G+AI+ T+ +++ +PL+ + M+ Sbjct: 1 MDFGIGFLSSNVMLPILDFFYGLVPSYGLAIIALTLVIRIALYPLSAGAIRNARRMRIAN 60 Query: 394 PKI----DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 P + E+RE++ P + LQ+ +L+K NPLAGC+P+LLQ+P+ FA++ + Sbjct: 61 PVMQKRQQEIRERYANDPSK-LQEETAKLFKEFG-NPLAGCFPLLLQMPLLFALFATLR 117 Score = 56.9 bits (136), Expect = 9e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 41/93 (44%), Gaps = 9/93 (9%) Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFP--AGLIIYWS 543 V + +S+++ ++S A + Q + PV+F FP AG+++Y Sbjct: 265 WDVLGLVLAFGVSLYVSQQLSSQGAAPNPQQDQVNKITPVLFSGMFLFFPLPAGVLMYMV 324 Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +N+ +Q ++M+ L + L+ ++ Sbjct: 325 IANIFQTLQTFILMR-----EPLPENLQKLVTE 352 >gi|255657156|ref|ZP_05402565.1| hypothetical protein CdifQCD-2_15996 [Clostridium difficile QCD-23m63] gi|296452006|ref|ZP_06893721.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile NAP08] gi|296879599|ref|ZP_06903578.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile NAP07] gi|296259197|gb|EFH06077.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile NAP08] gi|296429402|gb|EFH15270.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile NAP07] Length = 216 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 15/211 (7%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI+ + L+S +N G+FGI+I+L T+ VKL+ PL+ KQ S + + K++ ++ Sbjct: 3 FISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEHIK 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K ++ + IQ+ ++ + GC +L+Q+PV +A+Y V + Sbjct: 63 EKYKNDTKEL--EKQIQVNSVESMKSMLGCLIVLVQMPVVYALYHVCLDMTKEFTTIIIP 120 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI +L D I L ++ + I S F +K AM+ Sbjct: 121 WIANLGTFDNLFILPCIYTLIMLASNLVNYIPYLKINSQVKF----------NKQMAMVT 170 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ P + +Y+ S + S++ Sbjct: 171 TITSLILTVRT---PVAIGLYFITSAIYSLI 198 >gi|312437493|gb|ADQ76564.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH60] Length = 202 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 29/200 (14%) Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINP---LAGCWPILLQIPVFF 441 MK +P++++++EK K++ Q + ++Q+YK +++NP + GC P+L+Q+P+ Sbjct: 1 MKVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIM 60 Query: 442 AIYKVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +Y V+ L + P + W DL D I + G+L F + Sbjct: 61 GLYFVLKDQLVDGLFKYPHFLWF-DLGRPD-IWITIIAGVLYF----------------I 102 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IM 557 ++ K P + M++ P++ ++ S + L +YWS S +VQ I Sbjct: 103 QAYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIY 162 Query: 558 KMHGAEIGLIDRLRSTFSKN 577 A+ + + + ++ Sbjct: 163 YEKVAKKEVQPFIEAYEREH 182 >gi|20073181|gb|AAH27191.1| Oxa1l protein [Mus musculus] Length = 411 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 35/216 (16%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F L + AI TV + L FPL K A + N P++ + + +++ Q Sbjct: 106 FTELGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQ 165 Query: 413 KA-------MIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGW 461 M + K H+I L L Q PVF A+ ++ ++ + W Sbjct: 166 AEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVPSLQTGGLWW 225 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----Q 516 +DL +DP + P++++ +M+ +++ + Sbjct: 226 FQDLTVSDPIYVL-------------------PLVVTATMWCVLELGAETGVQSNDLQFM 266 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 267 RNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 302 >gi|223718097|ref|NP_005006.3| mitochondrial inner membrane protein OXA1L [Homo sapiens] Length = 495 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 84/224 (37%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + + +L + AI TVF + L FPL A + N P+I + + + Sbjct: 185 IQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIR 244 Query: 405 QSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ M K H I + Q P+F A+ ++ ++ + Sbjct: 245 EAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPS 304 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP I P+ ++ +M+ +++ Sbjct: 305 LQTGGLWWFQDLTVSDPIYIL-------------------PLAVTATMWAVLELGAETGV 345 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 346 QSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 389 >gi|2546979|emb|CAA05127.1| OXA1L [Homo sapiens] gi|119586653|gb|EAW66249.1| oxidase (cytochrome c) assembly 1-like [Homo sapiens] Length = 495 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 84/224 (37%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + + +L + AI TVF + L FPL A + N P+I + + + Sbjct: 185 IQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIR 244 Query: 405 QSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ M K H I + Q P+F A+ ++ ++ + Sbjct: 245 EAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPS 304 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP I P+ ++ +M+ +++ Sbjct: 305 LQTGGLWWFQDLTVSDPIYIL-------------------PLAVTATMWAVLELGAETGV 345 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 346 QSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 389 >gi|167516128|ref|XP_001742405.1| hypothetical protein [Monosiga brevicollis MX1] gi|163779029|gb|EDQ92643.1| predicted protein [Monosiga brevicollis MX1] Length = 235 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 34/221 (15%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-----QSPPQVLQKA 414 + + I TT+ ++ L PL + + NIQP++ ++ + Q A Sbjct: 27 WAVGICATTILMRTLMLPLVFGSMRNNTILMNIQPQLQLHSQRIRECQTRNDHDGAAQAA 86 Query: 415 --MIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468 + L+K H ++PL G P+ +Q PVF A+ ++ ++ +E W DL AA Sbjct: 87 ANLNGLFKEHGVHPLKGLLPLFVQAPVFISFFMALRQMANLPIESMKTGGLLWFTDLTAA 146 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMILNWMPV 525 DP + P+I S +M ++ + + + + Sbjct: 147 DPYYVL-------------------PVIASATMLATIEFGSEGVKQNNVMMKNVFRGLSI 187 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 V + + P + +YW +N+ S+ Q ++ K+ G + L Sbjct: 188 VLLPVTINLPTAIFVYWCTANMFSLSQMLML-KIPGLKKSL 227 >gi|259046600|ref|ZP_05737001.1| membrane protein OxaA2 [Granulicatella adiacens ATCC 49175] gi|259036765|gb|EEW38020.1| membrane protein OxaA2 [Granulicatella adiacens ATCC 49175] Length = 315 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 108/257 (42%), Gaps = 39/257 (15%) Query: 337 GWFY-FIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMK 390 GW Y ++ P L++ ++ GN+ IAI++ +V V+++ P Q S M Sbjct: 41 GWLYEYLVVPTQWLLNQIASMFNGNYAIAIVIVSVLVRVVLMPTQFHQMKSMLVQQEKMA 100 Query: 391 NIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPL----AGCWPILLQIPVFFA 442 ++P I E+ + +Q+ +Q+ + LYK +N++ + +GC P+L+ +P++ Sbjct: 101 VLKPYIAEITARAEQAATPQEKLEIQQEQMDLYKLNNVSLMGGLGSGCLPLLITLPIWSG 160 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y I +S E+ + F G + ++P + I SL Sbjct: 161 LYNAILLSNEISSSDFMG----------------IALGKEFVPLAIATAALYYIQSL--- 201 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + K + +PV+ PAG+ IY+ S +I I+Q + Sbjct: 202 VSQMGMDEETKKQSRSMNYILPVMMFMMTFQSPAGVGIYFFASALIQILQSWIQN----- 256 Query: 563 EIGLIDRLRSTFSKNYN 579 L ++++ + N Sbjct: 257 -TYLRPKIKAQIDEELN 272 >gi|110741684|dbj|BAE98788.1| hypothetical protein [Arabidopsis thaliana] Length = 302 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 21/200 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 WF IA M ++ + + ++G AI+L TV VK FPL KKQ S MK+ Sbjct: 96 WFSGIANYMETILKVLKDGLSTVHVPYSYGFAIILLTVLVKAATFPLTKKQVESAMAMKS 155 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P+I ++E++ + +Q +LYK INPLAGC P L IPV+ +Y+ +S Sbjct: 156 LTPQIKAIQERYAGD-QEKIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 214 Query: 452 -EMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPIIMSL 499 E + WI LA + I LF G P P + + P+++ Sbjct: 215 DEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFIEGHPPLGWPDTLAYLVLPLLLVF 274 Query: 500 SMF--IQMKMSPPPADKGQA 517 S + IQ+ S D Sbjct: 275 SQYLSIQIMQSSQSNDPAMK 294 >gi|158336230|ref|YP_001517404.1| putative inner membrane protein translocase component YidC [Acaryochloris marina MBIC11017] gi|158306471|gb|ABW28088.1| inner membrane protein OxaA, putative [Acaryochloris marina MBIC11017] Length = 404 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 71/116 (61%), Gaps = 7/116 (6%) Query: 338 WFYFIAKP-MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + FI+ M ++ +FY +V ++G+AI+ T+ ++ + +P++ Q + MK QP + Sbjct: 3 FIGFISDNIMLPILDFFYGIVPSYGLAIVALTLVIRSVLYPVSAGQIRNMRRMKVSQPVM 62 Query: 397 D----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 EL+E++K P + LQ+ +L+K NPLAGC+P+L+Q+P+ FA++ + Sbjct: 63 QKRQKELQERYKDDPAK-LQEEQTKLFKEFG-NPLAGCFPLLIQMPILFALFATLR 116 Score = 55.0 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQA---MILNWMPVVFVFALSSFP--AGLIIY 541 + I +S+++ +S + + +MPV+F FP AG+++Y Sbjct: 278 HWDILFMVIGFGVSLYVNQLLSGQSGGDSGSQQQAMNKYMPVMFSGMFLFFPLPAGVLLY 337 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +N+ VQ + K E L + K + Sbjct: 338 MLLANIFQTVQSYFLSKEPLPE-NLQKIVDEQERKKAKEE 376 >gi|85662644|gb|AAI12332.1| Oxidase (cytochrome c) assembly 1-like [Homo sapiens] Length = 496 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 84/224 (37%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + + +L + AI TVF + L FPL A + N P+I + + + Sbjct: 185 IQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIR 244 Query: 405 QSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ M K H I + Q P+F A+ ++ ++ + Sbjct: 245 EAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPS 304 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP I P+ ++ +M+ +++ Sbjct: 305 LQTGGLWWFQDLTVSDPIYIL-------------------PLAVTATMWAVLELGAETGV 345 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 346 QSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 389 >gi|313678196|ref|YP_004055936.1| membrane protein [Mycoplasma bovis PG45] gi|312950783|gb|ADR25378.1| putative membrane protein [Mycoplasma bovis PG45] Length = 721 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 99/251 (39%), Gaps = 14/251 (5%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV--KLLFFPLAKKQYVSTANMKNIQ 393 +G F + +S + +G +G I++ + + + + KQ V+ + + ++ Sbjct: 471 YGLLVFPTAWLSAHLSTSLSHLGGWGTIIVILVLTIILRSAMLAITFKQTVNQSKQEELK 530 Query: 394 ---PKIDELREKFKQSPPQV--LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 KID +FK + Q+ + +LYK H INP +L+ +P+F +++VI Sbjct: 531 SKKAKIDAKYAEFKNNKQMKARQQQEVAELYKKHGINPFDAFVTMLISLPIFIMMWRVIQ 590 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNI---FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ- 504 E + + G + + G+L P I++ F + Sbjct: 591 SLPEFKSTVWLGISFAETSWRRLFFSGEWQYLGVLLVVAIVQGVAQFLPQILNRKKFKER 650 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI---MKMHG 561 + A K M +VF F F AGL +YW S + +I+Q I K Sbjct: 651 TSLEEEKALKKANRTQRIMTIVFFFVTLIFSAGLQVYWIISGLWTIIQTLSIHQFKKSTY 710 Query: 562 AEIGLIDRLRS 572 +D+ ++ Sbjct: 711 YRRKYLDKHKA 721 >gi|328774396|gb|EGF84433.1| hypothetical protein BATDEDRAFT_34302 [Batrachochytrium dendrobatidis JAM81] Length = 459 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 38/229 (16%) Query: 346 MFMLMS-YFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +F ++S Y Y G + I+ T+ V+++ PLA K V+ A + ++PK D ++++ Sbjct: 190 LFQIISEYIYVYSGMPWWATIVALTIIVRIIVAPLAIKAQVAGAVLGGLRPKTDPIQKRV 249 Query: 404 KQ-------SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM--- 453 + Q + + Q+YK +NI+PL+ W I +Q P+F +++ I E+ Sbjct: 250 THLRSIGDTAGSQREAQKLFQVYKDNNISPLSIGWGI-IQAPIFISVFMAIKYMAELPVP 308 Query: 454 -RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--- 509 +GWI +L+ ADPT I PI+ S+ M I M+ SP Sbjct: 309 GFTTGGFGWITNLSTADPTYIL-------------------PILSSIGMLITMEYSPKLT 349 Query: 510 --PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 PP MI+ VV + + P + IY S V+ I Q ++ Sbjct: 350 GSPPQSAMILMIMRVASVVMIPVMGGLPVAVFIYMLVSTVLMIAQMYLL 398 >gi|148704410|gb|EDL36357.1| oxidase assembly 1-like, isoform CRA_a [Mus musculus] Length = 351 Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 82/209 (39%), Gaps = 35/209 (16%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA----- 414 + AI TV + L FPL K A + N P++ + + +++ Q Sbjct: 53 WWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQAEFYKAT 112 Query: 415 --MIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468 M + K H+I L L Q PVF A+ ++ ++ + W +DL + Sbjct: 113 IEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVPSLQTGGLWWFQDLTVS 172 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----QAMILNWM 523 DP + P++++ +M+ +++ + I+ M Sbjct: 173 DPIYVL-------------------PLVVTATMWCVLELGAETGVQSNDLQFMRNIIRVM 213 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P+V + FP+ + +YW SNV S+ Q Sbjct: 214 PLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 242 >gi|255731476|ref|XP_002550662.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240131671|gb|EER31230.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 378 Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 109/265 (41%), Gaps = 26/265 (9%) Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML--IDWGWFYFIAKPMFMLMSYFYNLVG 358 I+ F + I + +L + L I + + L+ + + G Sbjct: 54 EISDKLTSFDDSSAVSGIAEHVTNLHSDQLGYLQSIGLAQGWGPTSIIERLLEFTHVYTG 113 Query: 359 -NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM-- 415 + I+ V +++ FPL K + M I+P+++ + ++ K KAM Sbjct: 114 LPWWGTIITAAVAIRIFIFPLYVKASANATKMSKIKPEMEAIMDEIKAGGQAEQMKAMEK 173 Query: 416 -IQLYKTHNINPLAGCWPILLQIP----VFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 +L K H+++ LA +P L+QIP F A+ K+ + ++E + W ++L DP Sbjct: 174 RRKLMKKHDVSMLASVYP-LVQIPFAYGFFQALRKMANANVEGFSDQGYAWFQNLIEVDP 232 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 G + I+ + M + KG ++ +P+ + Sbjct: 233 YL-------------GLHAISCLAIMSIVRMGGET--GQATMAKGMQKLMYVLPLASIVI 277 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAV 555 +F A +++Y++ ++V+S++Q + Sbjct: 278 TKNFAACVMVYFAANSVLSLIQSLI 302 >gi|227547696|ref|ZP_03977745.1| inner membrane protein translocase component YidC [Corynebacterium lipophiloflavum DSM 44291] gi|227080222|gb|EEI18185.1| inner membrane protein translocase component YidC [Corynebacterium lipophiloflavum DSM 44291] Length = 377 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 108/284 (38%), Gaps = 46/284 (16%) Query: 342 IAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 P+ +M +++ L+ ++ +++L V +++L PL Y + + + Sbjct: 5 FVYPVSAVMKFWHWLLAGVFGMESSNSWVASVVLLVVTIRVLIAPLQWYTYKTARVLVLM 64 Query: 393 QPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 +P++ + ++ Q +A +L+K +N NPLAGC P L+QIP F +Y+++ Sbjct: 65 RPRMAAIEAQYGDEITPENVQAHARARKELHKEYNYNPLAGCLPALIQIPFFLGLYRLLL 124 Query: 449 ISLEMRHA-------------PFWGWIKDLAAADPTNI------FTLFG---------IL 480 + + L P + F G + Sbjct: 125 WMAVPSSSDGRSLGVLSPAEVESFRETTLLGVPLPAYVSMTPEQFAHLGTTLADVRTLAI 184 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS-----FP 535 P + + ++ + + A + A + +P+V + + P Sbjct: 185 PMLIAAVCFTTLNLVLSQIRSRSTLDWGSAVAHRSYAFVWALVPIVVLGLAIAGLTGLVP 244 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 L++YW N+++++Q V+ + L D R+ S+ + Sbjct: 245 VALLLYWVSGNILTLIQTIVLWYLMVRIYPLDDDHRAHISEKKS 288 >gi|149063883|gb|EDM14153.1| rCG23545, isoform CRA_d [Rattus norvegicus] Length = 411 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 81/216 (37%), Gaps = 35/216 (16%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F L + AI TV + L FPL K A + N P++ + + +++ Q Sbjct: 106 FAELGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLSGDQ 165 Query: 413 KA-------MIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGW 461 M K H+I L Q P+F A+ ++ ++ + W Sbjct: 166 AEFYKATIEMTHYQKKHDIKFFRPLILPLTQAPIFISFFIALREMANLPVPSLQTGGLWW 225 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----Q 516 +DL +DP + P++++ +M+ +++ + Sbjct: 226 FQDLTVSDPIYVL-------------------PLVVTATMWGVLELGAETGMQSSDLQLM 266 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ MP+ + FP+ + +YW SNV S+ Q Sbjct: 267 RNVIRVMPLAVLPVTIHFPSAVFMYWLSSNVFSLCQ 302 >gi|238916077|ref|YP_002929594.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC 27750] gi|238871437|gb|ACR71147.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC 27750] Length = 633 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 103/240 (42%), Gaps = 12/240 (5%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 ++ + +M++ Y L+ ++G+AI+L T+ K++ P++ ++ M +QP I+ + Sbjct: 3 ILSTALGYVMNFCYKLLHDYGLAIILFTLISKIVLLPVSIWVQKNSIKMVKMQPDINRIL 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 K ++ + +LYK NPLA P+++QI + + VI + A Sbjct: 63 IKHYGDKDEIA-EEQSKLYKKEKYNPLASLIPLIIQIILLLGVVAVIKDGINEGVANMKF 121 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 DL T I T L P V W ++ ++ + + + ++ Sbjct: 122 CGYDL-----TWITTKQWGLSIITPIIAGVSAW--LLCVAQNASNVLQAEQSKLNKYGMM 174 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ----QAVIMKMHGAEIGLIDRLRSTFSK 576 + + ++ AG+ +YW+ SN+ +I+Q I + + ++ + ++ Sbjct: 175 IFSVGLSLYLGCFVYAGVALYWTASNIFAILQLYLLNWAINPKNYVDYEALEETKKELAE 234 >gi|37589026|gb|AAH01669.2| OXA1L protein [Homo sapiens] Length = 437 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 84/224 (37%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + + +L + AI TVF + L FPL A + N P+I + + + Sbjct: 127 IQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIR 186 Query: 405 QSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ M K H I + Q P+F A+ ++ ++ + Sbjct: 187 EAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPS 246 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP I P+ ++ +M+ +++ Sbjct: 247 LQTGGLWWFQDLTVSDPIYIL-------------------PLAVTATMWAVLELGAETGV 287 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 288 QSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 331 >gi|38372882|sp|Q15070|OXA1L_HUMAN RecName: Full=Mitochondrial inner membrane protein OXA1L; AltName: Full=Hsa; AltName: Full=OXA1Hs; AltName: Full=Oxidase assembly 1-like protein; Short=OXA1-like protein; Flags: Precursor gi|619491|emb|CAA56712.1| OXA1Hs [Homo sapiens] gi|194389996|dbj|BAG60514.1| unnamed protein product [Homo sapiens] Length = 435 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 84/224 (37%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + + +L + AI TVF + L FPL A + N P+I + + + Sbjct: 125 IQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIR 184 Query: 405 QSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ M K H I + Q P+F A+ ++ ++ + Sbjct: 185 EAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPS 244 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP I P+ ++ +M+ +++ Sbjct: 245 LQTGGLWWFQDLTVSDPIYIL-------------------PLAVTATMWAVLELGAETGV 285 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 286 QSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 329 >gi|213408000|ref|XP_002174771.1| inner membrane protein oxa1-2 [Schizosaccharomyces japonicus yFS275] gi|212002818|gb|EEB08478.1| inner membrane protein oxa1-2 [Schizosaccharomyces japonicus yFS275] Length = 368 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 83/236 (35%), Gaps = 37/236 (15%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 ++ + ++ + G + +I T + +++L FPL +++ M I P++ Sbjct: 88 WWPYPYLQSILEVIHVYSGMPWWASIAATAIGMRVLMFPLMLGMIRTSSRMAAIGPQVAG 147 Query: 399 LREKFKQSP-------PQVLQKAMIQLYKTHNINPLAGCWPILLQ----IPVFFAIYKVI 447 + Q + +LYK + INP+ +Q + F+A+ + Sbjct: 148 HMATLHGARLAGDSLAMQKATLEVQRLYKENGINPMRLLRAPFIQGILFVSFFYALKTMA 207 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + +GW+ DL DP + PI L M+ +++ Sbjct: 208 DFPVPGLEHGGFGWVMDLTKPDP-------------------MHAIPIANGLLMWANIEL 248 Query: 508 ------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + P M + +FP + +YW SN+ SI Q + Sbjct: 249 GSENGTNKSPVAPSMKRFFRLMCLASPLFTMNFPMAIFMYWLPSNLFSIFQGFFLR 304 >gi|156554266|ref|XP_001603843.1| PREDICTED: similar to cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Nasonia vitripennis] Length = 436 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 95/248 (38%), Gaps = 37/248 (14%) Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 P + L GW A + + + + ++ + I++TT+ V+ L P+ K Sbjct: 122 GEPTLQSLGLGGWSP--AGLVQQYLDFLHVSVDLPWWATILITTMCVRTLLLPVVIKIQR 179 Query: 385 STANMKNIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQI 437 A M NIQP+I L+ + ++ L + + K ++P+ LLQ Sbjct: 180 FAARMHNIQPQIQYLQSQLSEARKMGDRLEAARLSHELYEFMKQKGVSPIKNAALPLLQA 239 Query: 438 PV----FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 PV F+A+ ++ +E W DL DP + Sbjct: 240 PVFLSFFWALKGMVQAPVESMKEGGLWWFTDLTVPDPYYLL------------------- 280 Query: 494 PIIMSLSMFIQMKMSPPPADKG----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 PII S+++ ++M ++ P + + F ++ YW +N+ S Sbjct: 281 PIITSMTLAATIEMGTDAVRVQSLGLMRYVIRASPYIMFPFIMKFEGAILCYWVSTNMFS 340 Query: 550 IVQQAVIM 557 +VQ +++ Sbjct: 341 LVQVSILR 348 >gi|154496118|ref|ZP_02034814.1| hypothetical protein BACCAP_00402 [Bacteroides capillosus ATCC 29799] gi|150274673|gb|EDN01737.1| hypothetical protein BACCAP_00402 [Bacteroides capillosus ATCC 29799] Length = 474 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 114/293 (38%), Gaps = 71/293 (24%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + P ++ FY L N+GIA++L V VK++ FPL+ K S M + ++ +L+ Sbjct: 6 LLLTPFVWVLMLFYELFDNYGIALILFAVLVKVILFPLSIKAKRSMIQMNMLNGQMQKLQ 65 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGC----WPILLQIPVFFAIYKVISISLEM--- 453 + + + + + +LY+ +NP+ GC P+++ +P++ I + ++ + + Sbjct: 66 KMYGNNRDK-YNLEVQKLYEKEKVNPMGGCLWSMLPLVILLPLYAIIRQPLTYLMNLTPD 124 Query: 454 ---------------RHAPFWGWIKDLAAADPTNIFTLFGILP----------------- 481 A + D A ++ I P Sbjct: 125 VISEVARVVDWNNAAVSAGWIKEAADFANVGYNQLYLASLITPENIGAVQAVAEGARVIN 184 Query: 482 ------------------FYLPGFMHVG--IWPIIMSLS----MFIQMKMS-------PP 510 + + H+G + PI+ + S I MK + Sbjct: 185 FNFLGLNLAQMPQWQFWTWSSVDWAHIGLFLMPIVSAGSGLLFSLIMMKTNAVNQQSRNA 244 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 A+ +L P++ ++ + PAGL +YW NV+S++Q+ + K+ + Sbjct: 245 AANSTNKTMLIISPLMSLWIGFAMPAGLSVYWISQNVLSMLQEFLAGKLLKKD 297 >gi|254389837|ref|ZP_05005061.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294812826|ref|ZP_06771469.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] gi|326441223|ref|ZP_08215957.1| hypothetical protein SclaA2_09156 [Streptomyces clavuligerus ATCC 27064] gi|197703548|gb|EDY49360.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294325425|gb|EFG07068.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 245 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 55/232 (23%), Positives = 93/232 (40%), Gaps = 14/232 (6%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F + + + L+ + L AI++ T V+L PL++ + P++ E Sbjct: 4 FATLVERLAELLQPLF-LGSATAAAIVVFTALVRLAVHPLSRAAARGQKASARLAPRVAE 62 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 LREK +P + L++ + LY +P+AGC P LLQ+P FF +Y + S + Sbjct: 63 LREKHGGNP-ERLRRELADLYAKERTSPVAGCLPSLLQLPAFFVLYHLFSSADIGGEPNE 121 Query: 459 WGWIKDLAAADPTNIF-------TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-- 509 LAA L G YL F V + + QM P Sbjct: 122 LLHHTLLAAPLGDRWTDAVGGGEVLNGAGAVYLVLFAIVTVVAAVNYRRTRKQMAAGPQL 181 Query: 510 PPADKGQAMILNWMPVVFVFALSS---FPAGLIIYWSWSNVISIVQQAVIMK 558 A G ++ ++P++ L + P +Y S S V++ V+ + Sbjct: 182 QTAAPGMGAMMRFLPLLSFATLITVAVVPLAAALYVVTSTTWSAVERIVLYR 233 >gi|114652024|ref|XP_001156985.1| PREDICTED: oxidase (cytochrome c) assembly 1-like isoform 4 [Pan troglodytes] gi|114652026|ref|XP_509840.2| PREDICTED: mitochondrial inner membrane protein OXA1L isoform 5 [Pan troglodytes] Length = 435 Score = 113 bits (284), Expect = 5e-23, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 84/224 (37%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + + +L + AI TVF + L FPL A + N P+I + + + Sbjct: 125 IQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIR 184 Query: 405 QSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ M K H I + Q P+F A+ ++ ++ + Sbjct: 185 EAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPS 244 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP I P+ ++ +M+ +++ Sbjct: 245 LQTGGLWWFQDLTVSDPIYIL-------------------PLAVTATMWAVLELGAETGV 285 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 286 QSSDLQWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 329 >gi|291444979|ref|ZP_06584369.1| membrane protein [Streptomyces roseosporus NRRL 15998] gi|291347926|gb|EFE74830.1| membrane protein [Streptomyces roseosporus NRRL 15998] Length = 246 Score = 113 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 21/204 (10%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + AI+L T V+L PL++ +QP+I ELR+K ++P + +QKA++ Sbjct: 15 TASTAAAIILFTALVRLAVHPLSRAAARGQKARSRLQPQIAELRKKHGRNP-ERMQKAIM 73 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF-- 474 +L+ ++PL+GC P LLQ+P FF +Y + S S + P DL A + Sbjct: 74 ELHAAEKVSPLSGCLPSLLQMPAFFLLYHLFSSS-SIGGEPNALLSHDLLGAPLGGRWHD 132 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFI------QMKMSPPPAD--------KGQAMIL 520 L PF G +++G++ I+ +++ F QM +P G + Sbjct: 133 ALAHGGPFGGQGLVYLGLFVIVAAVATFSYGRTKRQMAANPMTPAAGPDGQPVPGMGAMT 192 Query: 521 NWMPVVFVFALSS---FPAGLIIY 541 MP++ F L + P +Y Sbjct: 193 KLMPLLSFFTLITVAVVPLAAALY 216 >gi|319893042|ref|YP_004149917.1| short form OxaI-like inner membrane protein translocase component YidC [Staphylococcus pseudintermedius HKU10-03] gi|317162738|gb|ADV06281.1| short form OxaI-like inner membrane protein translocase component YidC [Staphylococcus pseudintermedius HKU10-03] Length = 288 Score = 113 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 33/264 (12%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVST----ANM 389 D +F +PM L+ + + + N +G+AI++ + V+++ P Y + M Sbjct: 29 DGFFFNTFVQPMDRLIHWLGDHLNNNYGLAIIIIVLVVRIVLLPFMLSNYKNMHMMREKM 88 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P+I E +EK K++ Q + M+Q+YK +N+NP+A GC P++LQ+P+ Sbjct: 89 KIAKPEITEAQEKVKRARTQEDKMAANQEMMQVYKKYNMNPMASMLGCLPLILQMPIIMG 148 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 ++ V+ P G I + F P I ++ + + Sbjct: 149 LFFVLKY-------PSGGGITKYSD---------FLWFHLDKPDIWITTIAGVLYFIQAY 192 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + P + M++ P++ V+ S A L +YWS S +VQ + ++G Sbjct: 193 VSSFNMPQEQRQMGYMMMIISPIMIVWISFSSAAALGLYWSVSAAFLVVQTYIANVVYGK 252 Query: 563 EIG-----LIDRLRSTFSKNYNSQ 581 + LI + + + N + Sbjct: 253 KAKEEVAPLIKKFEAEKNGNKTGK 276 >gi|323463903|gb|ADX76056.1| membrane protein OxaA [Staphylococcus pseudintermedius ED99] Length = 288 Score = 113 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 33/264 (12%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVST----ANM 389 D +F +PM L+ + + + N +G+AI++ + V+++ P Y + M Sbjct: 29 DGFFFNTFVQPMDRLIHWLGDHLNNNYGLAIIIIVLVVRIVLLPFMLSNYKNMHMMREKM 88 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFA 442 K +P+I E +EK K++ Q + M+Q+YK +N+NP+A GC P++LQ+P+ Sbjct: 89 KIAKPEITEAQEKVKRARTQEDKMAANQEMMQVYKKYNMNPMASMLGCLPLILQMPIIMG 148 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 ++ V+ P G I + F P I ++ + + Sbjct: 149 LFFVLKY-------PSGGGITKYSD---------FLWFHLDKPDIWITIIAGVLYFIQAY 192 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + P + M++ P++ V+ S A L +YWS S +VQ + ++G Sbjct: 193 VSSFNMPQEQRQMGYMMMIISPIMIVWISFSSAAALGLYWSVSAAFLVVQTYIANVVYGK 252 Query: 563 EIG-----LIDRLRSTFSKNYNSQ 581 + LI + + + N + Sbjct: 253 KAKEEVAPLIKKFEAEKNGNKTGK 276 >gi|260950689|ref|XP_002619641.1| hypothetical protein CLUG_00800 [Clavispora lusitaniae ATCC 42720] gi|238847213|gb|EEQ36677.1| hypothetical protein CLUG_00800 [Clavispora lusitaniae ATCC 42720] Length = 353 Score = 113 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 89/235 (37%), Gaps = 26/235 (11%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G I + + ++ Y+ + +G I+ T + FPL K + A M ++P+ Sbjct: 71 YGPTALIERMLEY--THVYSGLPWWG-TIIAGTFIARAFMFPLYVKSSANMAKMARVKPE 127 Query: 396 IDELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIYKVIS 448 +D+L K + + +LYK + I P+ Q+P F A K+ + Sbjct: 128 LDQLMNDIKTGDNEDRMLAMRKRTKLYKENGIKTAHSLLPM-AQLPLAYGFFQATRKMAA 186 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 +E W +DL DP + L +++ M + Sbjct: 187 YPVEGFSTQGAYWFQDLTQVDPYLGLQILTAL---------------VVTGMMRSGGETG 231 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + ++ W+P + S + +++Y++ ++V S Q V+ + + Sbjct: 232 AQAMNPMMKKVMTWLPFASILITQSMSSAVVLYFAANSVFSFFQSLVLKNKYFRK 286 >gi|114652028|ref|XP_001156923.1| PREDICTED: oxidase (cytochrome c) assembly 1-like isoform 3 [Pan troglodytes] Length = 408 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 84/224 (37%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + + +L + AI TVF + L FPL A + N P+I + + + Sbjct: 125 IQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIR 184 Query: 405 QSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ M K H I + Q P+F A+ ++ ++ + Sbjct: 185 EAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPS 244 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP I P+ ++ +M+ +++ Sbjct: 245 LQTGGLWWFQDLTVSDPIYIL-------------------PLAVTATMWAVLELGAETGV 285 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 286 QSSDLQWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 329 >gi|332222935|ref|XP_003260624.1| PREDICTED: mitochondrial inner membrane protein OXA1L [Nomascus leucogenys] Length = 436 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 83/224 (37%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + + +L + AI TVF + L FPL A + N P+I + + + Sbjct: 125 IQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIR 184 Query: 405 QSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ M K H I + Q P+F A+ ++ ++ + Sbjct: 185 EAKLAGDHTEYYKASSEMAFYQKKHGIKLFKPLILPVTQAPIFISFFIALREMANLPVPS 244 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP I P+ ++ +M+ +++ Sbjct: 245 LQTGGLWWFQDLTVSDPIYIL-------------------PLAVTATMWAVLELGAETGV 285 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ MP++ + FP + +YW SN+ S+ Q Sbjct: 286 QSSDLQWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLAQ 329 >gi|289549934|ref|YP_003470838.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] gi|315659439|ref|ZP_07912302.1| lipoprotein [Staphylococcus lugdunensis M23590] gi|289179466|gb|ADC86711.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] gi|315495558|gb|EFU83890.1| lipoprotein [Staphylococcus lugdunensis M23590] Length = 273 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 91/239 (38%), Gaps = 31/239 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMKNIQ 393 +FY KP+ L+ L ++GIAI+L + ++ + PL Q +Q Sbjct: 31 FFYVFVKPIDWLLHSIGQLFHSYGIAIILIVIIIRSILLPLMLNQMKQMHTLREKRAIVQ 90 Query: 394 PKIDELREKFKQSPPQVLQKAMIQL----YKTHNINPLA---GCWPILLQIPVFFAIYKV 446 +I +++ + +Q+ ++K QL YK + I+P G PI +QIP+ + Sbjct: 91 DEISDIQTQMRQASTPEIRKEANQLLLAKYKEYGISPFKSILGSLPIFIQIPIILGLLAC 150 Query: 447 I--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S + P + W P L L +++ ++ +P Sbjct: 151 IKHPTSDALAQHPHFLWFN---LMHPDIWLALLAGLLYFIQPLVNAIHYP---------- 197 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K ++ P+ ++A A + +YW S IVQ + + + Sbjct: 198 -----KGQRKTYYTMMVLSPLFIIYASLHSAAAISLYWVVSASFLIVQTHFGHRRYKKQ 251 >gi|325678529|ref|ZP_08158140.1| putative stage III sporulation protein J [Ruminococcus albus 8] gi|324109748|gb|EGC03953.1| putative stage III sporulation protein J [Ruminococcus albus 8] Length = 466 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 1/113 (0%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F IA P+ +M Y + N+GIA+++ T +L+ FPL Q S A ++PK+DE Sbjct: 2 FDLIAIPLGWIMKGCYYVFKNYGIALLVFTFLTRLIMFPLNVNQQKSMAKNTMLKPKLDE 61 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 L K+ ++ Q LQ+ + LY +NP+A C P+++ + + FA+ VI L Sbjct: 62 LERKYGKNK-QKLQEEQMALYNETGVNPMASCLPMIVMMLILFAMIPVIYGPL 113 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 3/88 (3%) Query: 495 IIMSLSMFIQMKMSPPPADK--GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ +S Q K +P A A IL +MP+ ++ +P GL IYW +S++ S++Q Sbjct: 289 LVTVVSQHFQKKNNPDMAKMTGQNAFILYFMPLFSLWLTFKYPIGLGIYWCFSSLFSLIQ 348 Query: 553 QAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 ++ K++ E + + ++ +K S Sbjct: 349 TVILNKVYTPEY-VAELVQKDLAKQKAS 375 >gi|225620984|ref|YP_002722242.1| inner membrane protein [Brachyspira hyodysenteriae WA1] gi|225215804|gb|ACN84538.1| inner membrane protein [Brachyspira hyodysenteriae WA1] Length = 900 Score = 113 bits (283), Expect = 8e-23, Method: Composition-based stats. Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 23/227 (10%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----PKI 396 FI + +F L +NL ++ +I L ++ + L PL +NIQ P I Sbjct: 17 FIIETLFFLFKNIFNL--SYSTSIFLLSLSINFLSLPLYNIAEKWQEKERNIQNKMKPII 74 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 D ++ +K +L + ++ I G +L+QIP F A Y I ++ Sbjct: 75 DNIKAVYKGDQRYLLIRTCHRINGYKIIYAFRGVLGLLIQIPFFIAAYNFIYSLSDLSQG 134 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + IKD + D N+ +LPF + F + M S + +K S P Sbjct: 135 NLFF-IKDFSKPD--NLINGINLLPFTMTIFSILAG----MVYSKKLSIKESMP------ 181 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-MKMHGA 562 L ++F+ L + P+GL+ YW+ + + S+++ V+ K++ A Sbjct: 182 ---LYITSLIFLIILYNSPSGLLFYWNINCLFSLIKNIVLEYKLYRA 225 >gi|329767321|ref|ZP_08258846.1| hypothetical protein HMPREF0428_00543 [Gemella haemolysans M341] gi|328836010|gb|EGF85701.1| hypothetical protein HMPREF0428_00543 [Gemella haemolysans M341] Length = 295 Score = 113 bits (283), Expect = 8e-23, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 89/249 (35%), Gaps = 46/249 (18%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ---- 393 ++ KPM + +S + G++G +I++ T+ ++LL P Y + Q Sbjct: 29 FYEIFVKPMDLSLSKIHEYTGSWGWSIVIITLVIRLLVLPFMLNNYKVQNKSRKGQELAR 88 Query: 394 PKIDEL-----------------REKF-KQSPPQVLQKAMIQLYKTHNINPLA--GCWPI 433 P+++ + EK +S LQ+ + + K ++ PL+ GC P+ Sbjct: 89 PELEVVQKKQKAAKEKEARAISNEEKMQARSELMELQREQMAIMKKYDAMPLSLGGCLPM 148 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+ +P ++ +S L T G+ + I Sbjct: 149 LIPLPFLTGLFYTLSNPLYSAGITE---------------STFLGVFNLGTRSYTLPIIA 193 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMIL-------NWMPVVFVFALSSFPAGLIIYWSWSN 546 I+ ++ + MK+ P P GQ + P++ + +Y+ Sbjct: 194 FIVYAIQTTLTMKLMPTPTQPGQEQMQSQMQMMQWLSPIMITVFSFLVAGAVAVYYIVGG 253 Query: 547 VISIVQQAV 555 + I Q + Sbjct: 254 IFMIFQTYL 262 >gi|57089985|ref|XP_537362.1| PREDICTED: similar to Inner membrane protein OXA1L, mitochondrial precursor (Oxidase assembly 1-like protein) (OXA1-like protein) (OXA1Hs) (Hsa) isoform 1 [Canis familiaris] Length = 435 Score = 113 bits (283), Expect = 8e-23, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 85/224 (37%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + + NL + AI TV + L FPL K A + N P+I + + + Sbjct: 124 IQNLLEFMHVNLGLPWWGAIAACTVLARCLVFPLIVKGQREAAKIHNHLPEIQKFSTRIR 183 Query: 405 QSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ M K H++ L Q P+F A+ ++ ++ + Sbjct: 184 EAKLAGDQAEFYKASSEMTFYQKKHDVKLFRPLILPLTQAPIFISFFIALREMANLPVPS 243 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DPT I P++++ +M+ +++ Sbjct: 244 LQTGGLLWFQDLTLSDPTYIL-------------------PLVVTATMWGVLELGAETGM 284 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ MP+ + FP + +YW SN+ S+ Q Sbjct: 285 QSSDLQWMRNLIRVMPLAVLPITIHFPTAVFMYWLSSNMFSLGQ 328 >gi|213865391|ref|ZP_03387510.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 110 Score = 113 bits (283), Expect = 9e-23, Method: Composition-based stats. Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 21/129 (16%) Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 ++ S+E+RHAPF WI DL+A DP I PI+M ++MF Sbjct: 1 MLMGSIELRHAPFALWIHDLSAQDPYYIL-------------------PILMGVTMFFIQ 41 Query: 506 KMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 KMSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + + Sbjct: 42 KMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR-GLEKR 100 Query: 565 GLIDRLRST 573 GL R + Sbjct: 101 GLHSREKKK 109 >gi|28193182|emb|CAD62333.1| unnamed protein product [Homo sapiens] Length = 419 Score = 113 bits (283), Expect = 9e-23, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 84/224 (37%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + + +L + AI TVF + L FPL A + N P+I + + + Sbjct: 109 IQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIR 168 Query: 405 QSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ M K H I + Q P+F A+ ++ ++ + Sbjct: 169 EAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPS 228 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP I P+ ++ +M+ +++ Sbjct: 229 LQTGGLWWFQDLTVSDPIYIL-------------------PLAVTATMWAVLELGAETGV 269 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 270 QSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 313 >gi|256787512|ref|ZP_05525943.1| membrane protein [Streptomyces lividans TK24] gi|289771409|ref|ZP_06530787.1| membrane protein [Streptomyces lividans TK24] gi|289701608|gb|EFD69037.1| membrane protein [Streptomyces lividans TK24] Length = 237 Score = 113 bits (282), Expect = 9e-23, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 17/211 (8%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T V+LL PL++ +QP+I ELR K ++P + LQ+A+++L+ Sbjct: 28 IILFTALVRLLVHPLSRAAARGQKARTRLQPRIAELRRKHAKNP-EKLQRAVLELHAEEK 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF-GILPF 482 ++PL+GC P L QIP FF +Y + S S A + LAA F Sbjct: 87 VSPLSGCLPSLCQIPAFFLLYHLFSSSTIGGEANGLLSHQLLAAPLGGRWADAFGDGGLL 146 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD------------KGQAMILNWMPVVFVFA 530 G ++V ++ ++ ++ F AD G + MP + F Sbjct: 147 GGAGLVYVALFAVVAGVATFSYRLTRRTMADRPVLPAGDAGAVPGVGALTRVMPFMSFFT 206 Query: 531 LSS---FPAGLIIYWSWSNVISIVQQAVIMK 558 L + P +Y S S V++AV+ + Sbjct: 207 LVTVAVVPLAAALYVVTSTTWSAVERAVLYR 237 >gi|332638886|ref|ZP_08417749.1| 60 kDa inner membrane protein [Weissella cibaria KACC 11862] Length = 314 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 103/251 (41%), Gaps = 35/251 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 G F+ P+ M + +G G +I++ T V+L+ P+ Q M Sbjct: 21 GHADFLEGPLTSFMHMSEDWIGGTNAVGWSIVILTFVVRLILLPMMIHQQRGATIQQEKM 80 Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGC--WPILLQIPVFFAI 443 + +QP++ +++E K + Q +AM+ +Y+ + ++ L G +++Q PVF + Sbjct: 81 RLLQPQMSKIQEAQKTAQTQEEKMLASQAMMAVYRENGVSMLGGMNFATLIIQWPVFMGL 140 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y I S E+ HA F+G +L + P + + + + + ++ + P M Sbjct: 141 YAAIKNSHEIAHATFFGI--NLGSQSP--VLAIATAVAYGVQAYLSLIGIPAEQKKQMQS 196 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M M P + + G+ +Y+ ++ I+Q +I+ Sbjct: 197 MMLMMPIMMLIM------------TWVTNG---GIALYFFVGALVMIIQTLIII---VWR 238 Query: 564 IGLIDRLRSTF 574 L ++ TF Sbjct: 239 PKLRAQVAETF 249 >gi|114652033|ref|XP_001156862.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] Length = 419 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 84/224 (37%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + + +L + AI TVF + L FPL A + N P+I + + + Sbjct: 109 IQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIR 168 Query: 405 QSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ M K H I + Q P+F A+ ++ ++ + Sbjct: 169 EAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPS 228 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP I P+ ++ +M+ +++ Sbjct: 229 LQTGGLWWFQDLTVSDPIYIL-------------------PLAVTATMWAVLELGAETGV 269 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 270 QSSDLQWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 313 >gi|297694703|ref|XP_002824610.1| PREDICTED: mitochondrial inner membrane protein OXA1L [Pongo abelii] Length = 435 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 84/224 (37%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + + +L + AI TVF + L FPL A + N P+I + + + Sbjct: 125 IQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIR 184 Query: 405 QSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ M K H I + Q P+F A+ ++ ++ + Sbjct: 185 EAKLAGDHIEYYKASSEMAFYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPS 244 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP I P+ ++ +M+ +++ Sbjct: 245 LQTGGLWWFQDLTVSDPIYIL-------------------PLAVTATMWAVLELGAETGV 285 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 286 QSSDLQWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 329 >gi|301781256|ref|XP_002926062.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial inner membrane protein OXA1L-like [Ailuropoda melanoleuca] Length = 637 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 85/224 (37%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + + NL + AI T+ + L FPL K A + N P+I + + + Sbjct: 328 IQNLLEFMHVNLGLPWWGAIAACTILARCLVFPLIVKGQREAAKIHNHLPEIQKFSTRMR 387 Query: 405 QSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ M K ++I L Q P+F A+ ++ ++ + Sbjct: 388 EAKLAGDHAEFYKASSEMTFYQKKYDIKLFRPLILPLTQAPIFISFFIALREMANLPVPS 447 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP + P++++ +M+ +++ Sbjct: 448 LQTGGLLWFQDLTLSDPIYVL-------------------PLVVTATMWGVLELGAETGV 488 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + ++ MP+ + FP + +YW SN+ S+VQ Sbjct: 489 QSSDLQWMRNVIRVMPLAVLPITIHFPTAVFMYWLSSNMFSLVQ 532 >gi|185178696|ref|ZP_02964517.1| membrane protein OxaA [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|184209286|gb|EDU06329.1| membrane protein OxaA [Ureaplasma urealyticum serovar 5 str. ATCC 27817] Length = 383 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 58/309 (18%), Positives = 128/309 (41%), Gaps = 25/309 (8%) Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYE-KDLAIPRFEMLIDWGWFY-FIAKPMFML 349 N + G + GA + Y P + D+G FY P+ + Sbjct: 72 NSTVVGNGFELGFHVDPILGANDIRFDLIYSGTGPWYPMSDFSFDYGPFYALFVWPIAQI 131 Query: 350 MSYFYNLVGNFGIAI------MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + +F ++ + ++ + ++++ ++ + + T + IQ KI E+ K+ Sbjct: 132 LLHFMYATRDWPAGLNAILGLIIILLIIRVITMLISARATIQTERISEIQGKIAEINAKY 191 Query: 404 KQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 K + Q Q +LY+ HN+ PLA +++ +P+F IY+V++I ++ + Sbjct: 192 KDAKDMQSRQKKQMETKELYQKHNVKPLAPFESMIITLPIFLIIYRVVTILRPLKFISIF 251 Query: 460 GWIKDLAAADPTNIFTLF--GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----- 512 +I DL+A + IF+ F P+ + + + + + + K + Sbjct: 252 -YIWDLSATPISEIFSNFTTSGWPYIFFLLIIIPVQILSQKIPQLLAKKQNRSATTVGAK 310 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM-KMHGAEIGLI 567 +K Q M N + +V ++ +G+ +YW ++ + +I+Q +I + Sbjct: 311 NKQQLKRVRMTQNIIAIVLAVVVAISASGIGLYWFFNAIFTILQSYIIHVIIMKRRSNSA 370 Query: 568 DRLRSTFSK 576 R+ S +K Sbjct: 371 TRIESKLAK 379 >gi|241957285|ref|XP_002421362.1| cytochrome oxidase biogenesis protein, putative; inner membrane protein, mitochondrial precursor, putative; mitochondrial inner membrane translocase, putative; oxidase assembly protein, putative [Candida dubliniensis CD36] gi|223644706|emb|CAX40696.1| cytochrome oxidase biogenesis protein, putative [Candida dubliniensis CD36] Length = 376 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 99/227 (43%), Gaps = 26/227 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 GW + L+ + G + I++ T+ V+L+ FPL + + M I+P+ Sbjct: 92 GWGP--TSLIERLLEVTHVYTGLPWWGTIVVATIAVRLILFPLYVRASSNATKMSKIKPQ 149 Query: 396 IDELREKFKQSPPQVLQKAMIQ---LYKTHNINPLAGCWPILLQIP----VFFAIYKVIS 448 IDEL ++ K +AM + + K + ++ LA +P +Q+P F A+ K+ + Sbjct: 150 IDELLQQIKTGDTVEQMRAMEKRRLIMKENGVSTLATLFPA-VQLPLAYGFFQALRKMAN 208 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 ++E + W ++L DP G + II + + + Sbjct: 209 HNVEGFSDQGYAWFQNLIEVDPYL-------------GLQVISAAAIIAVVR--VGGETG 253 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 G ++ +P+ +F F + +I+Y++ +++ S++Q ++ Sbjct: 254 QHAMAAGMKKVMTVVPIASIFITKGFASAIILYFAVNSIFSLIQSSL 300 >gi|325474002|gb|EGC77190.1| inner membrane protein [Treponema denticola F0402] Length = 901 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 98/226 (43%), Gaps = 21/226 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNF-----GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + P++M + + + N G++I++ ++ + L+ P+ + IQ Sbjct: 6 YTIFIYPVYMFVEFILFIANNITQDHIGLSIIILSLGINLITLPIYNVAEKWQEMERIIQ 65 Query: 394 ----PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 PK+++++ FK ++ A + H + L + + +QIP F A Y+++S Sbjct: 66 KRMKPKVNDIKAVFKGDERYMILSAYYRQNNYHPLYALRSLFALFIQIPFFIAAYQLLSE 125 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 ++ + ++KDL A D G + + + PIIM++ + Sbjct: 126 LPALKETS-FLFLKDLGAPDK-----------LINIGSVSLNLLPIIMTVINIAASAVYT 173 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + + L +F+ L + P+GL++YW+ +N+ S+ + Sbjct: 174 KDLELKDKLTLYLTAFLFLILLYNSPSGLVLYWTLNNIFSLFKNIF 219 >gi|333024766|ref|ZP_08452830.1| putative preprotein translocase YidC subunit [Streptomyces sp. Tu6071] gi|332744618|gb|EGJ75059.1| putative preprotein translocase YidC subunit [Streptomyces sp. Tu6071] Length = 281 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 18/215 (8%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T V+LL PL++ + P+I LR K+ ++P + +Q+A+ +L+ H Sbjct: 41 IVVLTACVRLLLLPLSRTAARGQRERAGLAPEIAALRRKYAKNP-ERMQRALTELHAEHG 99 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI-LPF 482 ++PL GC P+L Q+P FF +Y V S S + AA PF Sbjct: 100 VSPLGGCLPMLCQLPFFFVLYHVFSSSRIGGEPNRLLPHRLFAAPLGDRWADALAHGGPF 159 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKM--------SPPPADKGQA-----MILNWMPVVFVF 529 G ++V ++ ++ +++ F + +P A GQ + +MP + F Sbjct: 160 GERGLVYVALFALVAAVATFSVRRNKRQLAGADTPLAAAGGQQVPGVGALTRFMPYMAYF 219 Query: 530 ALSS---FPAGLIIYWSWSNVISIVQQAVIMKMHG 561 L S P +Y S S V++AV+ + G Sbjct: 220 TLISVAVVPLAGALYIVTSTTWSAVERAVLYRERG 254 >gi|19112969|ref|NP_596177.1| mitochondrial inner membrane translocase Oxa102 [Schizosaccharomyces pombe 972h-] gi|13124377|sp|O43092|OXA12_SCHPO RecName: Full=Mitochondrial inner membrane protein oxa1-2; AltName: Full=Cytochrome oxidase biogenesis protein 1-2; Short=Sp2; Flags: Precursor gi|7363180|emb|CAB83161.1| mitochondrial inner membrane translocase Oxa102 [Schizosaccharomyces pombe] Length = 409 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 96/232 (41%), Gaps = 26/232 (11%) Query: 339 FYFIAKP-MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 F F+ + ++ + G + +I V +++ FP+ K ++A + I PK+ Sbjct: 92 FSFLPHNILQNGLNTLHIWSGLPWWASIAACAVAMRIAVFPIMLKMMKTSAKLAIINPKV 151 Query: 397 DELREKFKQSPPQVLQKAMIQ-------LYKTHNINPL----AGCWPILLQIPVFFAIYK 445 E ++ + + M+Q LYK +N+NPL A + +L I F+A+ Sbjct: 152 AEHMSVLSKAKAEGNSELMMQATTQIQNLYKVNNVNPLNLLSAPVFQGILFISFFYALKT 211 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + +E + W+ DL+ DP +IF + L +++++ + + Sbjct: 212 MAGVPVEGFTDGGFWWVNDLSQPDPLHIFPVANGL-------------LMLLNIELGSET 258 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ + +FP + +YW SNV S+ Q A + Sbjct: 259 GSNKVAMSPSMKKFFRFLCLASPLFTMNFPMAIFMYWFPSNVFSVFQGAFLR 310 >gi|57234200|ref|YP_181756.1| inner membrane protein, 60 kDa [Dehalococcoides ethenogenes 195] gi|57224648|gb|AAW39705.1| inner membrane protein, 60 kDa [Dehalococcoides ethenogenes 195] Length = 277 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 6/194 (3%) Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + ++L +PL +KQ +T M+ I ++ L++K Q L + ++LYK ++P Sbjct: 1 MVIRLALWPLNRKQLTATKKMQEITVHMEALKKKHGND-RQKLAEEQMKLYKESGVSPTG 59 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 P+L+Q P++ A+Y+ I L + F L + ++ + Sbjct: 60 CLVPMLIQFPIWIALYQAIVRVLAVTPEDFMNLADHLYSWPVVYQTLPLSNHFLWMDLSL 119 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPA-----DKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 +++ +SM++Q KMS P A M+ MP +F F SFP+GL YW Sbjct: 120 PDFALAVLVGVSMYVQQKMSTPKAINQQQAAQGQMMSFMMPFMFFFFSLSFPSGLAFYWF 179 Query: 544 WSNVISIVQQAVIM 557 S ++ I+ Q I Sbjct: 180 VSAIVGIIMQYFIT 193 >gi|254431771|ref|ZP_05045474.1| inner membrane protein OxaA [Cyanobium sp. PCC 7001] gi|197626224|gb|EDY38783.1| inner membrane protein OxaA [Cyanobium sp. PCC 7001] Length = 379 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 5/165 (3%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + ++ +FY LV ++G+AI+ TV ++L FPL+ + M+ QP + Sbjct: 2 IGYISDNLLLPILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRNARRMRIAQPVMQ 61 Query: 398 ELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 + + + K + PQ Q+ + +L K +PLAGC P+L+Q+P+ FA++ + S Sbjct: 62 KRQAEIKSRYANNPQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFATLRGSP-FA 119 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 P+ +K + A I T + P+I SL Sbjct: 120 DVPYTLNLKVVPAEQAAAIETKPFNSASHSIFVTSTNHVPVIASL 164 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 11/133 (8%) Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPG--FMHVGIWPIIMSLSMFIQMKMSPP-- 510 A I LAA G + F G + ++F+ +S Sbjct: 229 DATVEAKIPGLAARSGFLFIRALGQVGFMTDGSVNWDIAGLVGAFGATLFLSQILSGMGM 288 Query: 511 PADKGQAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P + Q+ PV+ FP AG+++Y +N+ +Q ++ + L + Sbjct: 289 PPNPQQSTANKITPVMITAMFLFFPLPAGVLLYMVVANIFQALQTFLLSR-----EALPE 343 Query: 569 RLRSTFSKNYNSQ 581 L++ + Q Sbjct: 344 NLQAILDQQRAQQ 356 >gi|2739285|emb|CAA63844.1| oxa1Sp2 [Schizosaccharomyces pombe] Length = 409 Score = 112 bits (281), Expect = 2e-22, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 96/232 (41%), Gaps = 26/232 (11%) Query: 339 FYFIAKP-MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 F F+ + ++ + G + +I V +++ FP+ K ++A + I PK+ Sbjct: 92 FSFLPHNILQNGLNTLHIWSGLPWWASIAACAVAMRIAVFPIMLKMMKTSAKLAIINPKV 151 Query: 397 DELREKFKQSPPQVLQKAMIQ-------LYKTHNINPL----AGCWPILLQIPVFFAIYK 445 E ++ + + M+Q LYK +N+NPL A + +L I F+A+ Sbjct: 152 AEHMSVLSKAKAEGNSELMMQATTQIQNLYKVNNVNPLNLLSAPVFQGILFISFFYALKT 211 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + +E + W+ DL+ DP +IF + L +++++ + + Sbjct: 212 MAGVPVEGFTDGGFWWVNDLSQPDPLHIFPVANGL-------------LMLLNIELGSET 258 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ + +FP + +YW SNV S+ Q A + Sbjct: 259 GSNKVAMSPSMKKFFRFLCLASPLFTMNFPMAIFMYWFPSNVFSVFQGAFLR 310 >gi|298709029|emb|CBJ30979.1| Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus siliculosus] Length = 342 Score = 112 bits (281), Expect = 2e-22, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 15/188 (7%) Query: 338 WFYFIAKPMFMLMSYFYNLVG---NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W FI + ++ FY +G +FG+AI+ T+ VK L PL Q S+ MK +QP Sbjct: 107 WIEFIRSSVLG-INEFYKGIGIEQSFGLAIVTFTLGVKTLLVPLQAIQLQSSEKMKVLQP 165 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV-ISISLEM 453 + E+ KF Q+ + A +LY +NPL GC P LLQ PVF +Y+ I + Sbjct: 166 TVKEINAKFGQNK-EAATAATNRLYAETKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDA 224 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--------WPIIMSLSMFIQM 505 + + W+ L N + G L ++ G +G P I+ LS + M Sbjct: 225 VASEGFLWLPSLQGPTFENGRGI-GWLTTFVDGHPILGWHDTLCYMSIPAILVLSQKLSM 283 Query: 506 KMSPPPAD 513 + PP D Sbjct: 284 TLLTPPDD 291 >gi|171920597|ref|ZP_02931850.1| membrane protein OxaA [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|188024459|ref|ZP_02997108.1| membrane protein OxaA [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518432|ref|ZP_03003923.1| membrane protein OxaA [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524211|ref|ZP_03004271.1| membrane protein OxaA [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867408|ref|ZP_03079412.1| membrane protein OxaA [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273351|ref|ZP_03205887.1| membrane protein OxaA [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554229|ref|YP_002285057.1| putative inner membrane protein translocase component YidC [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550935|ref|ZP_03771884.1| membrane protein OxaA [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551006|ref|ZP_03771952.1| membrane protein OxaA [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903307|gb|EDT49596.1| membrane protein OxaA [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|188018755|gb|EDU56795.1| membrane protein OxaA [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998160|gb|EDU67257.1| membrane protein OxaA [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659986|gb|EDX53366.1| membrane protein OxaA [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660884|gb|EDX54137.1| membrane protein OxaA [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249871|gb|EDY74651.1| membrane protein OxaA [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541730|gb|ACI59959.1| membrane protein OxaA [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225378821|gb|EEH01186.1| membrane protein OxaA [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225380089|gb|EEH02451.1| membrane protein OxaA [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 383 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 58/309 (18%), Positives = 128/309 (41%), Gaps = 25/309 (8%) Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYE-KDLAIPRFEMLIDWGWFY-FIAKPMFML 349 N + G + GA + Y P + D+G FY P+ + Sbjct: 72 NSTVVGNGFELGFHVDPILGANDIRFDLIYSGTGPWYPMSDFSFDYGPFYALFVWPIAQI 131 Query: 350 MSYFYNLVGNFGIAI------MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + +F ++ + ++ + ++++ ++ + + T + IQ KI E+ K+ Sbjct: 132 LLHFMYATRDWPAGLNAILGLIIILLIIRVITMLISARATIQTERISEIQGKIAEINAKY 191 Query: 404 KQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 K + Q Q +LY+ HN+ PLA +++ +P+F IY+V++I ++ + Sbjct: 192 KDAKDMQSRQKKQMETKELYQKHNVKPLAPFESMIITLPIFLIIYRVVTILRPLKFISIF 251 Query: 460 GWIKDLAAADPTNIFTLF--GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----- 512 +I DL+A + IF+ F P+ + + + + + + K + Sbjct: 252 -YIWDLSATPISEIFSNFTTSGWPYIFFLLIIIPVQILSQKIPQLLAKKRNRSATTVGAK 310 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM-KMHGAEIGLI 567 +K Q M N + +V ++ +G+ +YW ++ + +I+Q +I + Sbjct: 311 NKQQLKRVRMTQNIIAIVLAVVVAISASGIGLYWFFNAIFTILQSYIIHVIIMKRRSNSA 370 Query: 568 DRLRSTFSK 576 R+ S +K Sbjct: 371 TRIESKLAK 379 >gi|326429399|gb|EGD74969.1| hypothetical protein PTSG_07193 [Salpingoeca sp. ATCC 50818] Length = 370 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 88/224 (39%), Gaps = 29/224 (12%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + G ++ I+L+T+ ++ L P+ + M N++P++ ++ K Sbjct: 59 VQNLLEFVAAQPGMSWFGGIVLSTIAIRTLMLPITVAMMRNNVTMMNLRPEMQLHADRIK 118 Query: 405 QSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 Q Q + + +L K + ++PL + QIPVF + + + A Sbjct: 119 QCAAQGDEEGKIAASQRLQELMKKNGVSPLKSLYG-FAQIPVFLSFFFALRSITGGEVAS 177 Query: 458 F----WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + + DL AADPT + + M LS + +M Sbjct: 178 IKTGGYSFFTDLTAADPTYVLPVVTA---------------TTMLLSFELSSRM-GTAMS 221 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + +V ++ P G+ YW SN+ ++ Q AV+ Sbjct: 222 PTMKKVFRGLALVTGAVTATLPMGIHAYWITSNIFTLGQVAVLN 265 >gi|321259157|ref|XP_003194299.1| hypothetical protein CGB_E3570C [Cryptococcus gattii WM276] gi|317460770|gb|ADV22512.1| Conserved hypothetical protein [Cryptococcus gattii WM276] Length = 468 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 99/265 (37%), Gaps = 23/265 (8%) Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML---MSYFYNLVG-NFGIA 363 L +G ++ E A + L G+ + I + + +G ++ A Sbjct: 90 LHSGKSVQEVLNSEEAVHAAMKLSDLKLIGYDHGILSITGWFTDGLVALHTELGLSWWAA 149 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK---QSPPQVLQ----KAMI 416 I TTV ++L L + + + P+I EL + K + +Q + + Sbjct: 150 IAGTTVLIRLCLTRLVVNTQKHSVRLAAVNPQIQELMTEAKTASANKDTHMQTLISQRLR 209 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTN 472 L K HN+NPL L+Q+P+F + ++ + GW+ DL AADP Sbjct: 210 DLMKEHNVNPLRPLMLPLIQMPIFLTFFSIVRGLANLPLPQLKEGGLGWVTDLTAADPYY 269 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I +L L P + + + Q P++ F Sbjct: 270 ILPATSLLFTNLVFKFGADGVPTAAKAGSPMT---TAHIRNFIQLTTFLSFPLIMYF--- 323 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIM 557 P+ L+ YW++S +++Q ++ Sbjct: 324 --PSALLFYWTFSTGFTLLQSIILR 346 >gi|213407522|ref|XP_002174532.1| mitochondrial inner membrane translocase Oxa101 [Schizosaccharomyces japonicus yFS275] gi|212002579|gb|EEB08239.1| mitochondrial inner membrane translocase Oxa101 [Schizosaccharomyces japonicus yFS275] Length = 361 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 95/238 (39%), Gaps = 25/238 (10%) Query: 340 YFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 Y+ + ++ + + G + +I+LTT+ ++ L PL + + + +IQP++ + Sbjct: 70 YWPYAFIQNAVNGIHCISGAPWWASIILTTIGIRSLMLPLTLRSMKNARALSHIQPRVKK 129 Query: 399 LREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQ----IPVFFAIYKVI 447 + K + + A+ ++Y+++NINPL ++Q I F+ + K+ Sbjct: 130 YVDAMKAAKLENDTYAVTQNAYAIQKIYRSNNINPLTVAISPIIQATVFISFFYGLRKMS 189 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+ ++ W +DL DP I L +L + Sbjct: 190 QASIAGFNSGGLLWFRDLTTYDPYYILPTLNGLLVFLSFRENARF-------------GT 236 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 S + + ++ F P+ + +YW S + + +Q V ++ A++ Sbjct: 237 SSAASSVHMQTFMQLFCLLTPFITCHVPSSVFLYWIPSTMFTAIQALVTRRLDRAKLS 294 >gi|313112582|ref|ZP_07798243.1| inner membrane protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310625104|gb|EFQ08398.1| inner membrane protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 137 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 1/115 (0%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +FY ++ P+ +M + Y L+ ++G I++ T+ + ++ PL Q S A M QP + Sbjct: 7 FFYILSGPLGYVMEWIYKLLPSYGWDIIIFTLLINIVKIPLQLSQQKSMAKMSAFQPMMM 66 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 E++ K+K P+ Q+ M++L + + NP AGC P+LL V F + V+ LE Sbjct: 67 EIQTKYK-DKPEKQQEEMLKLQQDYGYNPTAGCVPMLLNFLVMFGVIGVVYNPLE 120 >gi|13358167|ref|NP_078441.1| putative inner membrane protein translocase component YidC [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762036|ref|YP_001752687.1| putative inner membrane protein translocase component YidC [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920376|ref|ZP_02690825.2| membrane protein OxaA [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508481|ref|ZP_02958012.1| membrane protein OxaA [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701708|ref|ZP_02971400.1| membrane protein OxaA [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|38503225|sp|Q9PPN7|OXAA_UREPA RecName: Full=Membrane protein oxaA gi|11356766|pir||F82871 conserved hypothetical membrane lipoprotein UU602 [imported] - Ureaplasma urealyticum gi|6899613|gb|AAF31016.1|AE002158_14 conserved hypothetical membrane lipoprotein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827613|gb|ACA32875.1| membrane protein OxaA [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902808|gb|EDT49097.1| membrane protein OxaA [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675901|gb|EDT87806.1| membrane protein OxaA [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700974|gb|EDU19256.1| membrane protein OxaA [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 383 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 58/309 (18%), Positives = 128/309 (41%), Gaps = 25/309 (8%) Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYE-KDLAIPRFEMLIDWGWFY-FIAKPMFML 349 N + G + GA + Y P + D+G FY P+ + Sbjct: 72 NSTIVGNGFELGFHVDPILGANDIRFDLIYSGTGPWYPMSDFSFDYGPFYALFVWPIAQI 131 Query: 350 MSYFYNLVGNFGIAI------MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + +F ++ + ++ + ++++ ++ + + T + IQ KI E+ K+ Sbjct: 132 LLHFMYATRDWPAGLNAILGLIIILLIIRVITMLISARATIQTERISEIQGKIAEINAKY 191 Query: 404 KQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 K + Q Q +LY+ HN+ PLA +++ +P+F IY+V++I ++ + Sbjct: 192 KDAKDMQSRQKKQMETKELYQKHNVKPLAPFESMIITLPIFLIIYRVVTILRPLKFISIF 251 Query: 460 GWIKDLAAADPTNIFTLF--GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----- 512 +I DL+A + IF+ F P+ + + + + + + K + Sbjct: 252 -YIWDLSATPISEIFSNFTTSGWPYIFFLLIIIPVQILSQKIPQLLARKRNRNATTVGAK 310 Query: 513 DKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM-KMHGAEIGLI 567 +K Q M N + +V ++ +G+ +YW ++ + +I+Q +I + Sbjct: 311 NKQQLKRVRMTQNIIAIVLAVVVAISASGIGLYWFFNAIFTILQSYIIHVIIMKRRSNSA 370 Query: 568 DRLRSTFSK 576 R+ S +K Sbjct: 371 TRIESKLAK 379 >gi|318057143|ref|ZP_07975866.1| hypothetical protein SSA3_04345 [Streptomyces sp. SA3_actG] gi|318080025|ref|ZP_07987357.1| hypothetical protein SSA3_25903 [Streptomyces sp. SA3_actF] Length = 281 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 18/215 (8%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T V+LL PL++ + P+I LR K+ ++P + +Q+A+ +L+ H Sbjct: 41 IVVLTACVRLLLLPLSRTAARGQRERAGLAPEIAALRRKYAKNP-ERMQRALTELHAEHG 99 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI-LPF 482 ++PL GC P+L Q+P FF +Y V S S + AA + PF Sbjct: 100 VSPLGGCLPMLCQLPFFFVLYHVFSSSRIGGEPNRLLPHRLFAAPLGGHWGDALAHGGPF 159 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKM--------SPPPADKGQA-----MILNWMPVVFVF 529 G ++V ++ ++ +++ F + +P A GQ + +MP + F Sbjct: 160 GERGLVYVALFALVAAVATFTVRRNKRQLAGADTPLAAAGGQQVPGVGALTRFMPYMAYF 219 Query: 530 ALSS---FPAGLIIYWSWSNVISIVQQAVIMKMHG 561 L S P +Y S S V++AV+ + G Sbjct: 220 TLISVAVVPLAGALYIVTSTTWSAVERAVLYRERG 254 >gi|325185413|emb|CCA19898.1| mitochondrial inner membrane protein OXA1 putative [Albugo laibachii Nc14] Length = 362 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 104/266 (39%), Gaps = 25/266 (9%) Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-N 359 S ++T I + + + G+ + ++Y ++ G Sbjct: 50 SSSSTMNTSYEQNANDNITQIVAAASDSTTNAVPELGFG--LGDLTIQALAYIHSTTGLP 107 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-----VLQKA 414 + I ++TV V+ + + K + A +K IQPK+++L+E+ + P Q+ Sbjct: 108 WWATIAVSTVIVRSVMIYPSIKGIRNAAKLKIIQPKLEKLKEEMEVGPRTPEKVIDFQRK 167 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---SISLEMRHAPFWGWIKDLAAADPT 471 L ++++ G + L QIP+F + + E W DL AADPT Sbjct: 168 YKALMSANDVSIFRGLYVPLFQIPMFLGFFWGLRELPKYYESCKEGGALWFTDLGAADPT 227 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 I + + +++++ + ++ DK + + M V+ + Sbjct: 228 YILPV-------------LNAALMLVAVETGSEGGLNNDMRDK-MKIGMRCMSVLMIPFT 273 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIM 557 F GL ++W SN S+ Q A++ Sbjct: 274 MHFETGLFVFWIASNTCSLAQSAMLR 299 >gi|255102348|ref|ZP_05331325.1| hypothetical protein CdifQCD-6_16136 [Clostridium difficile QCD-63q42] gi|255308247|ref|ZP_05352418.1| hypothetical protein CdifA_16766 [Clostridium difficile ATCC 43255] Length = 216 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 95/211 (45%), Gaps = 15/211 (7%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI+ + L+S +N G+FGI+I+L T+ VKL+ PL+ KQ S + + K++ ++ Sbjct: 3 FISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEHIK 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K ++ + IQ+ ++ + GC +L+Q+PV +A+Y V + Sbjct: 63 EKYKNDTKEL--EKQIQVSSVESMKSMLGCLIVLVQMPVVYALYHVCLDMTKEFTTIIIP 120 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI +L D I L ++ + I S F +K A++ Sbjct: 121 WIANLGTFDNLFILPCIYTLIMLASNLVNYIPYLKINSQVKF----------NKQMAVVT 170 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ P + +Y+ S + S++ Sbjct: 171 TITSLILTVRT---PVAIGLYFITSAIYSLI 198 >gi|255074419|ref|XP_002500884.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299] gi|226516147|gb|ACO62142.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299] Length = 223 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 82/213 (38%), Gaps = 32/213 (15%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK--QSPPQVL---QKA 414 + AIM TT +++ P Q A M +P+I+ L + K QV+ QK Sbjct: 8 WWAAIMATTAIMRVFVMPFMVMQQRVAARMHIAKPEIEALNARIKGMGGDQQVMAEAQKE 67 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---------WIKDL 465 + ++K HN NP PI +Q P+F + Y IS + + G + DL Sbjct: 68 IFAIWKKHNCNPAYMMLPIAVQAPLFISFYFAISEMAKGVPSFASGGPDWPLGPISMHDL 127 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW--- 522 AADPT I + F + P + Q M+ W Sbjct: 128 TAADPTYIMPVLSSATFLATVELGGAGNPETSGAA--------------QQTMMTKWGLR 173 Query: 523 -MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 + V + + F G+ +YW +N+ S+ Q Sbjct: 174 ALSVALIPMTAGFSKGVFVYWITTNMFSLGQTL 206 >gi|297199948|ref|ZP_06917345.1| membrane protein [Streptomyces sviceus ATCC 29083] gi|297147539|gb|EDY54451.2| membrane protein [Streptomyces sviceus ATCC 29083] Length = 237 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 19/235 (8%) Query: 342 IAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 A + L + L G A I+L T FV+LL PL++ +QPKI EL Sbjct: 4 FADLVQHLADLLHPLFGATAAAAAIVLFTAFVRLLVHPLSRAAARGQKARTKLQPKIAEL 63 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 R++ K P LQKA++ L+ ++PL+GC P L Q+P FF +Y + S + A Sbjct: 64 RKQHK-DQPDKLQKAVLALHAEEKVSPLSGCLPGLFQLPAFFLLYHLFSNTTIGGKANEL 122 Query: 460 GWIKDLAAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKM----------- 507 + AA G F G ++V ++ ++ ++ F + Sbjct: 123 LSHQLFAAPLGGRWADALGDGGMFKGAGLVYVCLFAFVVVVATFNYRRTKRMMATNPVMP 182 Query: 508 ----SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P P ++ +M +F ++ P +Y S+ + V++A + + Sbjct: 183 VTDGQPVPGAGAMTKLMPFMSFFTLFTVAVVPLAAALYVVTSSTWAAVERAALYR 237 >gi|21221301|ref|NP_627080.1| membrane protein [Streptomyces coelicolor A3(2)] gi|6689184|emb|CAB65581.1| putative membrane protein [Streptomyces coelicolor A3(2)] Length = 237 Score = 112 bits (279), Expect = 3e-22, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 17/211 (8%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T V+LL PL++ +QP+I ELR K ++P + LQ+A+++L+ Sbjct: 28 IILFTALVRLLVHPLSRAAARGQKARTRLQPRIAELRRKHAKNP-EKLQRAVLELHAEEK 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF-GILPF 482 ++PL+GC P L QIP FF +Y + S S + LAA F Sbjct: 87 VSPLSGCLPSLCQIPAFFLLYHLFSSSTIGGEVNGLLSHQLLAAPLGGRWADAFGDGGLL 146 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD------------KGQAMILNWMPVVFVFA 530 G ++V ++ ++ ++ F AD G + MP + F Sbjct: 147 GGAGLVYVALFAVVAGVATFSYRLTRRTMADRPVLPAGDAGAVPGVGALTRVMPFMSFFT 206 Query: 531 LSS---FPAGLIIYWSWSNVISIVQQAVIMK 558 L + P +Y S S V++AV+ + Sbjct: 207 LVTVAVVPLAAALYVVTSTTWSAVERAVLYR 237 >gi|318040384|ref|ZP_07972340.1| putative inner membrane protein translocase component YidC [Synechococcus sp. CB0101] Length = 378 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 7/166 (4%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + Sbjct: 2 IGYISDNLLLPILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRSARRMRIAQPVMQ 61 Query: 398 ----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 E++ K+ +P Q Q+ + L K +PL+GC P+L+Q+P+ FA++ + S Sbjct: 62 KRQAEIKAKYANNP-QKQQEELGSLMKEFG-SPLSGCLPLLVQMPILFALFATLRGSP-F 118 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 P+ +K L A + P + P+I SL Sbjct: 119 ADVPYTLNLKVLPADQIAAVEPKPFNSPSHSIFVTATNHVPVIASL 164 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 11/121 (9%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSPP--PADKGQA 517 I LAA G + FY G + I S+F+ +S PA+ QA Sbjct: 236 IPGLAARSGFLFIKALGQVGFYTDGAINWDIAILVAAFGASLFVSQILSGMGMPANPQQA 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 PV+ FP AG+++Y +N+ Q ++ + L D L++ Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVVANIFQAAQTFLLTR-----EALPDNLQAILD 350 Query: 576 K 576 + Sbjct: 351 Q 351 >gi|326803748|ref|YP_004321566.1| membrane protein insertase, YidC/Oxa1 family [Aerococcus urinae ACS-120-V-Col10a] gi|326651023|gb|AEA01206.1| membrane protein insertase, YidC/Oxa1 family [Aerococcus urinae ACS-120-V-Col10a] Length = 308 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 99/238 (41%), Gaps = 30/238 (12%) Query: 339 FYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMKNIQ 393 F IA P+ L+ + GN+G AI+ + ++LL PL KQ S+ + Q Sbjct: 36 FRLIASPINQLIEWLAQFFNGNYGFAIIGLVIIIRLLLIPLTYKQQTSSILGTEKRRYYQ 95 Query: 394 PKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVI 447 P + + +E + + Q K +NI+ GC+P+L+Q+P+ +Y I Sbjct: 96 PYLMKFQELIQGAETPEEQMEYTRQQQAFMKDNNISLFGNMGCFPLLIQLPILSGMYVAI 155 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + + + F+G + +P + T+ IL + L I M+ Sbjct: 156 YNNQNIANYNFFG----FSLGEPNLVLTIIFIL---------------LSFLQTRISMQT 196 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P + Q + +MP++ F + + PA + +Y + + ++QQ I I Sbjct: 197 MPEEVREQQGKSMLFMPLMLGFVVFNVPAAIGLYLVTTTIWGMLQQLAINTFVHPRIK 254 >gi|78369430|ref|NP_001030412.1| mitochondrial inner membrane protein OXA1L precursor [Bos taurus] gi|122064647|sp|Q3SYV3|OXA1L_BOVIN RecName: Full=Mitochondrial inner membrane protein OXA1L; AltName: Full=Oxidase assembly 1-like protein; Short=OXA1-like protein; Flags: Precursor gi|74268195|gb|AAI03368.1| Oxidase (cytochrome c) assembly 1-like [Bos taurus] gi|296483636|gb|DAA25751.1| mitochondrial inner membrane protein OXA1L precursor [Bos taurus] Length = 441 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 83/224 (37%), Gaps = 36/224 (16%) Query: 346 MFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ + + NL + AI TV + L FPL K A + N P+I + + + Sbjct: 125 IQNLLEFMHVNLGLPWWGAIAACTVLARCLVFPLIVKGQREAAKIHNHLPEIQKFSARIR 184 Query: 405 QSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEM 453 ++ M K H+I L Q P+F A+ ++ ++ + Sbjct: 185 EAKLTGNHTEFYRASSEMTFYQKKHDIKLFRPLILPLTQAPIFISFFIALREMANLPVPS 244 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +DL +DP + P++++ +M+ +++ Sbjct: 245 LQTGGLWWFQDLTLSDPIYVL-------------------PLVVTATMWGVLELGAETGM 285 Query: 514 KG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + MP+ + FP + +YW SN+ S+ Q Sbjct: 286 QSSDLQWMRNFIRLMPLAVLPITIHFPTAVFMYWLSSNMFSLGQ 329 >gi|254976798|ref|ZP_05273270.1| hypothetical protein CdifQC_15858 [Clostridium difficile QCD-66c26] gi|255094184|ref|ZP_05323662.1| hypothetical protein CdifC_16201 [Clostridium difficile CIP 107932] gi|255315936|ref|ZP_05357519.1| hypothetical protein CdifQCD-7_16339 [Clostridium difficile QCD-76w55] gi|255518595|ref|ZP_05386271.1| hypothetical protein CdifQCD-_15858 [Clostridium difficile QCD-97b34] gi|255651715|ref|ZP_05398617.1| hypothetical protein CdifQCD_16123 [Clostridium difficile QCD-37x79] gi|260684747|ref|YP_003216032.1| hypothetical protein CD196_3018 [Clostridium difficile CD196] gi|260688405|ref|YP_003219539.1| hypothetical protein CDR20291_3064 [Clostridium difficile R20291] gi|306521514|ref|ZP_07407861.1| hypothetical protein CdifQ_18521 [Clostridium difficile QCD-32g58] gi|260210910|emb|CBA66127.1| putative membrane protein [Clostridium difficile CD196] gi|260214422|emb|CBE06852.1| putative membrane protein [Clostridium difficile R20291] Length = 216 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 95/211 (45%), Gaps = 15/211 (7%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI+ + L+S +N G+FGI+I+L T+ VKL+ PL+ KQ S + + K++ ++ Sbjct: 3 FISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEHIK 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K ++ + IQ+ ++ + GC +L+Q+PV +A+Y V + Sbjct: 63 EKYKNDTKEL--EKQIQVSSVESMKSMLGCLIVLVQMPVVYALYHVCLDMTKEFTTIIIP 120 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI +L D I L ++ + I S F +K A++ Sbjct: 121 WIANLGTFDNLFILPCIYTLIMLASNLVNYIPYLKINSQVKF----------NKQMAVVT 170 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ P + +Y+ S + S++ Sbjct: 171 TITSLILTVRT---PVAIGLYFITSAIYSLI 198 >gi|219856430|ref|YP_002473552.1| hypothetical protein CKR_3087 [Clostridium kluyveri NBRC 12016] gi|219570154|dbj|BAH08138.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 220 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 99/220 (45%), Gaps = 16/220 (7%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 I + ++ Y +++ G++GI+I+L T+ V+ + P++ KQ S + + + K++ELR Sbjct: 10 IILNVLNTVLGYLFSITGDYGISIILLTLIVRTILLPMSLKQRKSIHHQQVLSKKMEELR 69 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 K+K + + LQ+ M + YK + N GC LLQ+PV +++ V + Sbjct: 70 IKYKHNKDK-LQREMEKYYKQNTKNMF-GCLVTLLQLPVISSLFIVFNKMPAQIGTVIVP 127 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI ++ D I + L P F+ + I+ Q + L Sbjct: 128 WIVNMKMPDNYFIIPIIYTLVSLSPNFISYIPFLKIVKEVQV-------------QKINL 174 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ + P + IY + V S+ ++ VI +++ Sbjct: 175 VVTSIISMLITFKAPITIGIYLITTGVFSLFEE-VIYRLY 213 >gi|83319450|ref|YP_424810.1| putative inner membrane protein translocase component YidC [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|1176889|sp|P43042|OXAA_MYCCT RecName: Full=Membrane protein oxaA gi|416240|dbj|BAA03620.1| orf R3 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283336|gb|ABC01268.1| membrane protein oxaA [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 388 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 105/262 (40%), Gaps = 26/262 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN----------FGI----AIMLTTVFVKLLFFPLAKK 381 +G+F + + M ++ N +GI AI LTT+ +K + K Sbjct: 118 YGFFVYPTAWILAGMIKLFSGTLNPLLDKSSQLTYGISSIFAIFLTTLLIKGITLSFGWK 177 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQI 437 ++ M++IQ K+ +++ K+K Q Q + LYK N++ + + Sbjct: 178 SQINQEKMQDIQLKVADIQAKYKDKKDMQSKQKQQLEIQALYKKENMSQFSALAGSFAPL 237 Query: 438 PVFFAIYKVISISLEMRHAPFW------GWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 P FAIY ++ + ++ A G + + A + I L LP L + Sbjct: 238 PFLFAIYAIVRSTRALKIASVGPIALIEGPWQQITAGNYIYIIILAIYLP--LQAVSMLL 295 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + M I + + + K Q ++ M VF+ + S G+ IYW +S+++ I+ Sbjct: 296 PTLLQMKKQKSITLTEAQKKSRKKQLIMQVVMMFVFIIIIVSVATGVCIYWIFSSILQII 355 Query: 552 QQAVIMKMHGAEIGLIDRLRST 573 Q + + ++ R Sbjct: 356 QTYAFYLYNEKKRKAGNQERQR 377 >gi|153956096|ref|YP_001396861.1| hypothetical protein CKL_3499 [Clostridium kluyveri DSM 555] gi|146348954|gb|EDK35490.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] Length = 213 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 99/220 (45%), Gaps = 16/220 (7%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 I + ++ Y +++ G++GI+I+L T+ V+ + P++ KQ S + + + K++ELR Sbjct: 3 IILNVLNTVLGYLFSITGDYGISIILLTLIVRTILLPMSLKQRKSIHHQQVLSKKMEELR 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 K+K + + LQ+ M + YK + N GC LLQ+PV +++ V + Sbjct: 63 IKYKHNKDK-LQREMEKYYKQNTKNMF-GCLVTLLQLPVISSLFIVFNKMPAQIGTVIVP 120 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI ++ D I + L P F+ + I+ Q + L Sbjct: 121 WIVNMKMPDNYFIIPIIYTLVSLSPNFISYIPFLKIVKEVQV-------------QKINL 167 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ + P + IY + V S+ ++ VI +++ Sbjct: 168 VVTSIISMLITFKAPITIGIYLITTGVFSLFEE-VIYRLY 206 >gi|298246693|ref|ZP_06970498.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter racemifer DSM 44963] gi|297549352|gb|EFH83218.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter racemifer DSM 44963] Length = 296 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 93/239 (38%), Gaps = 21/239 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + P+F + Y +G+F +A+++ TV + +L PL +Q + +QP+I Sbjct: 8 FHTLFTYPIFNALLLLYAWLGDFSLALVVLTVSISVLLLPLTLRQIRQGRITRRLQPEIQ 67 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV----FFAIYKVISISLEM 453 LR ++ +A+ +LYK + I + +L+Q P+ +FA+ ++ L Sbjct: 68 ALRRRYASDRL-AQTRALQELYKAYGIRTSSTFLLLLIQAPIYSGLYFALNMILQAPLVA 126 Query: 454 RHAPFWGWIKDLAAADPTNIFTLF------GILPFYLPGFMHVGIWPIIMSLSMF----- 502 + + P T F + P + + + Sbjct: 127 DINRYLYPFVVHVTSLPNLHLTWFTVLNATWHISLGAPDPTAILPLLTGLLTLLQTWLTQ 186 Query: 503 ----IQMKMSPPPADKGQAMILNWMPVVFVFALSS-FPAGLIIYWSWSNVISIVQQAVI 556 ++ + + + +L +P ++ F AGL +Y S +++I QQ ++ Sbjct: 187 PLAAVEARDTMQHVSQNMQWLLLLLPAAMTVLIAWHFAAGLALYRVVSLLMNIGQQYIV 245 >gi|256384304|gb|ACU78874.1| membrane protein OxaA [Mycoplasma mycoides subsp. capri str. GM12] gi|256385137|gb|ACU79706.1| membrane protein OxaA [Mycoplasma mycoides subsp. capri str. GM12] gi|296455637|gb|ADH21872.1| membrane protein OxaA [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 396 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 106/264 (40%), Gaps = 30/264 (11%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN----------FGI----AIMLTTVFVKLLFFPLAKK 381 +G+F + + M ++ N +GI AI LTT+ +K + K Sbjct: 126 YGFFVYPTAWVLAGMVRLFSGTLNPLLDKSSQLSYGISAIFAIFLTTLLIKGITLSFGWK 185 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQI 437 ++ M++IQ KI +++ K+K Q Q + LYK N++ + + Sbjct: 186 SQINQEKMQDIQLKIADIQAKYKDKKDMQSKQKQQLEIQALYKKENMSQFSALAGSFAPL 245 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 P FAIY ++ + ++ + +A + G + + +++ + + M Sbjct: 246 PFLFAIYAIVRSTRALK----IAAVGPIALIEGPWQQITSGNYIYIIILAIYLPLQAVSM 301 Query: 498 SLSMFIQMKMS--------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 L +QMK + K Q ++ M VF+ + S G+ IYW +S+V+ Sbjct: 302 LLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVMMFVFIIIIVSVATGVCIYWIFSSVLQ 361 Query: 550 IVQQAVIMKMHGAEIGLIDRLRST 573 I+Q + + ++ R Sbjct: 362 IIQTYAFYLYNEKKRKAGNQERQR 385 >gi|42561574|ref|NP_976025.1| putative inner membrane protein translocase component YidC [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42493073|emb|CAE77667.1| Conserved hypothetical transmembrane protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320601|gb|ADK69244.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 396 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 106/264 (40%), Gaps = 30/264 (11%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN----------FGI----AIMLTTVFVKLLFFPLAKK 381 +G+F + + M ++ N +GI AI LTT+ +K + K Sbjct: 126 YGFFVYPTAWVLAGMVRLFSGTLNPLLDKSSQLSYGISAIFAIFLTTLLIKGITLSFGWK 185 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQI 437 ++ M++IQ KI +++ K+K Q Q + LYK N++ + + Sbjct: 186 SQINQEKMQDIQLKIADIQAKYKDKKDMQSKQKQQLEIQALYKKENMSQFSALAGSFAPL 245 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 P FAIY ++ + ++ + +A + G + + +++ + + M Sbjct: 246 PFLFAIYAIVRSTRALK----IAAVGPIALIEGPWQQITSGNYIYIIILAIYLPLQAVSM 301 Query: 498 SLSMFIQMKMS--------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 L +QMK + K Q ++ M VF+ + S G+ IYW +S+V+ Sbjct: 302 LLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVMMFVFIIIIVSVATGVCIYWIFSSVLQ 361 Query: 550 IVQQAVIMKMHGAEIGLIDRLRST 573 I+Q + + ++ R Sbjct: 362 IIQTYAFYLYNEKKRKAGNQERQR 385 >gi|328948290|ref|YP_004365627.1| membrane protein insertase, YidC/Oxa1 family [Treponema succinifaciens DSM 2489] gi|328448614|gb|AEB14330.1| membrane protein insertase, YidC/Oxa1 family [Treponema succinifaciens DSM 2489] Length = 894 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 90/216 (41%), Gaps = 17/216 (7%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----PKIDELREKFKQSPPQVLQKA 414 N G+A++ ++ V L PL + IQ P +++ FK ++ Sbjct: 30 NHGLAVIGLSIVVTLCTLPLYMVAEQWQEKEREIQENLKPGTKRIKKFFKGDEQYMILTT 89 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 + H + L + +L+QIP F A Y +S ++ + +IKD D T Sbjct: 90 FYKQNHYHPLMALRSSFSLLIQIPFFIAAYTFLSHLEALKGVS-FLFIKDFGNPDAT--- 145 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + G ++ + PI M+L I + + + + VF+ L + Sbjct: 146 --------FKIGSFYINVLPIAMTLINCISGALYSKGHGINEKIQIFGCAAVFLLLLYNS 197 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 PAGL++YW+ +N+ S+V+ + K+ + L L Sbjct: 198 PAGLVVYWTMNNIFSLVKN-IFYKLKNPKKVLYTIL 232 >gi|190344393|gb|EDK36061.2| hypothetical protein PGUG_00159 [Meyerozyma guilliermondii ATCC 6260] Length = 361 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 107/237 (45%), Gaps = 25/237 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW F+ +++ Y + +G I+ TV V+ + FPL K ++ A M ++P++ Sbjct: 80 GWGPTSLVERFLELTHVYTGLPWWG-TIIAATVAVRAVMFPLYVKSSINAAKMTKVKPEL 138 Query: 397 DELREKFKQSP-PQVLQKAMIQ---LYKTHNINPLAGCWPILLQIP----VFFAIYKVIS 448 D++ + +++ PQ +A + L K H+I+ +P LLQ+P F A+ K+ + Sbjct: 139 DQIMKDLREAENPQEQVQAAHKRKALMKQHDIHMSHQMFP-LLQLPLAYGFFQALRKMAN 197 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 +E + + W +DL DP + I+ L + I + Sbjct: 198 FPVEGFSSQGYAWFEDLTQVDPYCGLQVIAA---------------GIVVLMVRIGGETG 242 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + ++ ++P+ +F F A +++Y++ +++ S VQ V+ + ++ Sbjct: 243 AATMNPMLKKVMTYVPIASIFITKEFSAAVVLYFAINSMASFVQALVLRNKYFRKLA 299 >gi|146421675|ref|XP_001486782.1| hypothetical protein PGUG_00159 [Meyerozyma guilliermondii ATCC 6260] Length = 361 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 107/237 (45%), Gaps = 25/237 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW F+ +++ Y + +G I+ TV V+ + FPL K ++ A M ++P++ Sbjct: 80 GWGPTSLVERFLELTHVYTGLPWWG-TIIAATVAVRAVMFPLYVKSSINAAKMTKVKPEL 138 Query: 397 DELREKFKQSP-PQVLQKAMIQ---LYKTHNINPLAGCWPILLQIP----VFFAIYKVIS 448 D++ + +++ PQ +A + L K H+I+ +P LLQ+P F A+ K+ + Sbjct: 139 DQIMKDLREAENPQEQVQAAHKRKALMKQHDIHMSHQMFP-LLQLPLAYGFFQALRKMAN 197 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 +E + + W +DL DP + I+ L + I + Sbjct: 198 FPVEGFSSQGYAWFEDLTQVDPYCGLQVIAA---------------GIVVLMVRIGGETG 242 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + ++ ++P+ +F F A +++Y++ +++ S VQ V+ + ++ Sbjct: 243 AATMNPMLKKVMTYVPIASIFITKEFSAAVVLYFAINSMASFVQALVLRNKYFRKLA 299 >gi|124022319|ref|YP_001016626.1| inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9303] gi|123962605|gb|ABM77361.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT 9303] Length = 377 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 5/183 (2%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + Sbjct: 2 IGYISDNILLPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPAMK 61 Query: 398 ELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 + +++ K PQ Q+ + ++ K NPL+GC P+L+Q+P+ FA++ + S Sbjct: 62 KRQDEIKSRYAKDPQKQQEELGKVMKEFG-NPLSGCLPLLVQMPILFALFATLRGSP-FA 119 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 P+ +K L + I + +P+I SL ++ + K Sbjct: 120 DVPYLVNLKVLPSDQIAAIEPKPFTSSKHSIFISETKHFPVIASLQSGTKLGVGDKAQIK 179 Query: 515 GQA 517 Q Sbjct: 180 LQT 182 Score = 63.1 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 11/132 (8%) Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPG--FMHVGIWPIIMSLSMFIQMKMSPP-- 510 A G I LAA G + FY+ G + I L++ + +S Sbjct: 229 DATVQGKIPGLAAQSGFLFIKALGQVGFYVDGEINWDIAILVGGFGLTLLVSQILSGRGL 288 Query: 511 PADKGQAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 PA+ Q+ PV+ FP AG+++Y +N+ Q ++ + L + Sbjct: 289 PANPQQSTANKITPVMITGMFLFFPLPAGVLLYMVIANIFQAGQTFLLSR-----EALPE 343 Query: 569 RLRSTFSKNYNS 580 L+ ++ + Sbjct: 344 NLQKILNEQQSK 355 >gi|300855851|ref|YP_003780835.1| hypothetical protein CLJU_c26750 [Clostridium ljungdahlii DSM 13528] gi|300435966|gb|ADK15733.1| putative membrane protein [Clostridium ljungdahlii DSM 13528] Length = 213 Score = 111 bits (277), Expect = 5e-22, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 96/212 (45%), Gaps = 17/212 (8%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 I + L+++ +N G++GIA+++ T+ VK+L P++ KQ S + + K+++++ Sbjct: 3 IIFNLLGALLNHVFNFTGDWGIAVVVLTLIVKVLLMPMSMKQRFSILKQQKVAKKMEDIK 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 ++K + ++K + YK + + + GC ++Q+P+ +YK I + Sbjct: 63 IRYKNDKLK-MEKEIQNCYKDNLKSMM-GCLLTIIQLPIIGGLYKTIINMPVVSGTVLIP 120 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 W+ + +D I + + LPG ++ + + + + Sbjct: 121 WVASIKLSDSYFIVPIMYSIISMLPGLVNSIDYFKVYREVQY--------------NKMS 166 Query: 521 NWMP-VVFVFALSSFPAGLIIYWSWSNVISIV 551 +P V+ + P L +Y+ S+V S+V Sbjct: 167 AILPGVIGLLITIKAPIALGLYFITSSVFSLV 198 >gi|325265447|ref|ZP_08132170.1| membrane protein insertase, YidC/Oxa1 family [Clostridium sp. D5] gi|324029305|gb|EGB90597.1| membrane protein insertase, YidC/Oxa1 family [Clostridium sp. D5] Length = 429 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 20/179 (11%) Query: 335 DWGWFYFIAKPMFMLMSYFYNL------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 DW + I+ + LM+ YN+ + N GI I+L T+ + L PL KQ + Sbjct: 11 DWPIIHQISWLLGKLMNGIYNVLDGLFGIQNIGICIILFTIVIYTLMIPLTIKQQKWSKM 70 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 + P+I ++++K+ Q Q+ M +Y+ + +P GC P+L+Q+PV FA+Y Sbjct: 71 SSVMNPEIQKIQKKYANKKDQASMLKQQEEMQAIYEKYGTSPTGGCLPMLIQMPVLFALY 130 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI-WPIIMSLSMF 502 VI + +KD+ I G + +G P++MS S + Sbjct: 131 PVIQNIPNYVNG-----VKDIYMPVVNQIMATDG----FQKIMEKIGEAKPVLMSASSY 180 Score = 77.0 bits (188), Expect = 9e-12, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 7/99 (7%) Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-------ADKGQAMILNWMP 524 + + F + G + I PI+ L+ F+ +K+ P P + MP Sbjct: 237 FTMLMAAVKDFSIIGIILAVIIPIMAGLTQFLSVKLQPQPQVDPSNTMANSMKTMTYTMP 296 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + VF + PAGL +YW+ S ++ VQQ I K G + Sbjct: 297 LFSVFMGFTLPAGLGLYWAISALVRCVQQLAINKYLGKK 335 >gi|126700823|ref|YP_001089720.1| hypothetical protein CD3204 [Clostridium difficile 630] gi|115252260|emb|CAJ70101.1| putative membrane protein [Clostridium difficile] Length = 216 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 95/211 (45%), Gaps = 15/211 (7%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI+ + L+S +N G+FGI+I+L T+ VKL+ PL+ KQ S + + K++ ++ Sbjct: 3 FISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEYIK 62 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K ++ + IQ+ ++ + GC +L+Q+PV +A+Y V + Sbjct: 63 EKYKNDTKEL--EKQIQVSSVESMKSMLGCLIVLVQMPVVYALYHVCLDMTKEFTTIIIP 120 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI +L D I L ++ + I S F +K A++ Sbjct: 121 WIANLGTFDNLFILPCIYTLIMLASNLVNYIPYLKINSQVKF----------NKQMAVVT 170 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ P + +Y+ S + S++ Sbjct: 171 TITSLILTVRT---PVAIGLYFITSAIYSLI 198 >gi|33863638|ref|NP_895198.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9313] gi|38502916|sp|Q7V610|OXAA_PROMM RecName: Full=Inner membrane protein oxaA gi|33635221|emb|CAE21546.1| Putative inner membrane protein; similar to 60 kDa inner membrane protein family [Prochlorococcus marinus str. MIT 9313] Length = 378 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 5/165 (3%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + Sbjct: 2 IGYISDNILLPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPAMK 61 Query: 398 ELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 + +++ K PQ Q+ + ++ K NPL+GC P+L+Q+P+ FA++ + S Sbjct: 62 KRQDEIKSRYAKDPQKQQEELGKVMKEFG-NPLSGCLPLLVQMPILFALFATLRGSP-FA 119 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 P+ +K L + I + +P+I SL Sbjct: 120 DVPYLVNLKVLPSDQIAAIEPKPFTSSKHSIFISETKHFPVIASL 164 Score = 61.9 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 11/127 (8%) Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPG--FMHVGIWPIIMSLSMFIQMKMSPP-- 510 A G I LAA G + FY+ G + I L++ + +S Sbjct: 229 DATVQGKIPGLAAQSGFLFIKALGQVGFYVDGEINWDIAILVGGFGLTLLVSQILSGRGL 288 Query: 511 PADKGQAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 PA+ Q+ PV+ FP AG+++Y +N+ Q ++ + L + Sbjct: 289 PANPQQSTANKITPVMITGMFLFFPLPAGVLLYMVIANIFQAGQTFLLSR-----EALPE 343 Query: 569 RLRSTFS 575 L+ + Sbjct: 344 NLQKILN 350 >gi|310800716|gb|EFQ35609.1| YidC/Oxa1 family membrane protein insertase [Glomerella graminicola M1.001] Length = 476 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 102/238 (42%), Gaps = 32/238 (13%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +D+GW + M + + G + +I T + ++L+ F ++A M+ + Sbjct: 148 LDFGWGP--SSVMQWAFEHIHVYSGLPWWGSIAATGILLRLVMFKPLLMAQETSARMQKL 205 Query: 393 Q--PKIDELREKFKQSPPQVLQKAMIQL-------YKTHNINPLAGCWPILLQIPVFFAI 443 Q PK +E+R+ +++ + AM ++ K +NPL G W LLQIP + + Sbjct: 206 QQNPKYEEVRKGVQEAMSRGDTAAMTEMRRDLSVMNKNAGVNPLKGLWG-LLQIPFGYGM 264 Query: 444 YKVIS----ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 ++V++ I + + W+ DL +DP + + G P+ M Sbjct: 265 FRVLNGAAAIPVPGMETGGFLWVSDLTVSDPLFLLPIAG---------------PLAMFA 309 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + + + P A Q +++ + + V + PAG+ Y+ + + + Q + Sbjct: 310 MVKLGSRYATPQAKAQQKLMMYILGPISVIFTAYLPAGVQWYFFVAGAVGVFQNWLFN 367 >gi|300869002|ref|ZP_07113605.1| putative inner membrane protein translocase component YidC [Oscillatoria sp. PCC 6506] gi|300332982|emb|CBN58797.1| putative inner membrane protein translocase component YidC [Oscillatoria sp. PCC 6506] Length = 369 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE---K 402 M ++ +FY +V ++G+AI+ T+ ++ +PL + MK QP + E E K Sbjct: 1 MLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSLRNMRRMKVAQPLMKERVEQIQK 60 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 + P Q+ M ++YK NPLAGC+P+L+Q+PV FA++ + Sbjct: 61 LHKDNPAKQQEEMSKVYKEFG-NPLAGCFPLLVQMPVLFALFATLR 105 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 14/135 (10%) Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG---FMHVGIWPIIMSLSMFIQMKM 507 LE A G I LA G + P + + + +S+++ + Sbjct: 215 LEPGDATIQGTIPGLATNKGFLFIEALGRVGAIDPDGKIHWDILVMILGFGISLYVNQTL 274 Query: 508 SPPPA----DKGQAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHG 561 S + QA I PV+F FP AG+++Y +N+ VQ ++ + Sbjct: 275 SGQTQGPNDNPQQATINKLTPVIFSGMFLFFPLPAGVLMYMLVANIFQTVQAFILSR--- 331 Query: 562 AEIGLIDRLRSTFSK 576 L D L+ + Sbjct: 332 --EPLPDNLQKIVDE 344 >gi|146321574|ref|YP_001201285.1| preprotein translocase subunit YidC [Streptococcus suis 98HAH33] gi|145692380|gb|ABP92885.1| Preprotein translocase subunit YidC [Streptococcus suis 98HAH33] Length = 277 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 32/210 (15%) Query: 338 WFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA----NMKNI 392 + ++ +PM L+ +F + FG+AI++ T+ V+ + PL Q A M + Sbjct: 58 IWDWLGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYL 117 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPLA--GCWPILLQIPVFFAIYKV 446 +P + ++E+ K + Q Q A Q Y K + ++ L GC P+L+Q+P F AIY Sbjct: 118 KPILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFA 177 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + A F G + + I T+ + +Y + M+ Sbjct: 178 ARHTPGISEATFLG----INLGSTSLILTVVAGILYYAQSLL----------------MQ 217 Query: 507 MSPPPADKGQAMILNWM-PVVFVFALSSFP 535 + K Q + M P++ + P Sbjct: 218 VGMDEEQKKQMKTMALMNPIMIMMFSFGSP 247 >gi|213400723|gb|ACJ47010.1| hypothetical protein [Wolbachia endosymbiont of Folsomia candida] Length = 133 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 67/133 (50%), Gaps = 3/133 (2%) Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275 EG + D L E Y +I K + S +W G +DKYW + IP K + Sbjct: 1 HEGVLGAF-DNKLEEWTYKNIAKKHLVKASTSEKNWFGFADKYWLTAIIPDKSEKINVSI 59 Query: 276 KYLSDGH-ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 K+ + ++QA F + TILPG S + N FAGAK+ + Y+ L IP F+ I Sbjct: 60 KHTNVNDVDKFQADFVKSYKTILPGTSASNVNHFFAGAKKLKLLDSYKDSLNIPLFDKAI 119 Query: 335 DWGWFYFIAKPMF 347 D+G YFI KP+F Sbjct: 120 DFGVLYFITKPVF 132 >gi|194477174|ref|YP_002049353.1| putative inner membrane protein translocase component YidC [Paulinella chromatophora] gi|171192181|gb|ACB43143.1| putative inner membrane protein translocase component YidC [Paulinella chromatophora] Length = 382 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 5/165 (3%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + Sbjct: 2 IGYISDNLLLPILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRSARRMRIAQPVMQ 61 Query: 398 ELREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 + + + K + PQ Q+ + +L +PLAGC P+++Q+P+ FA++ + S Sbjct: 62 KRQAEIKTRYANNPQKQQEELGKLMNEFG-SPLAGCLPLIVQMPILFALFATLRGSP-FA 119 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 P+ +K L A T + T P + PI SL Sbjct: 120 DVPYTLNLKVLNADQITAVETKPFTGPSHSIFISETSHIPISASL 164 Score = 60.4 bits (145), Expect = 9e-07, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 11/137 (8%) Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMS 508 + + A I LAA G + Y G + + + +S+F+ +S Sbjct: 225 IGVGEATVEARIPGLAARSGFLFIKALGQVGLYTEGQVNWDIVVLVLAFGISLFVSQFLS 284 Query: 509 PP--PADKGQAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 PA+ Q+ PV+ FP AG+++Y +N+ +Q ++ + Sbjct: 285 GMGMPANPQQSTANKLTPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFILT-----QE 339 Query: 565 GLIDRLRSTFSKNYNSQ 581 L + L++ + +Q Sbjct: 340 RLPENLQAILEQQLANQ 356 >gi|331703940|ref|YP_004400627.1| membrane protein OxaA [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802495|emb|CBW54650.1| Membrane protein OxaA [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 388 Score = 110 bits (276), Expect = 6e-22, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 105/264 (39%), Gaps = 30/264 (11%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN----------FGI----AIMLTTVFVKLLFFPLAKK 381 +G+F + + M ++ N +GI AI LTT+ +K + K Sbjct: 118 YGFFVYPTAWVLAGMVRLFSGTLNPLLDKSSQLSYGISAIFAIFLTTLLIKGITLSFGWK 177 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQI 437 ++ M++IQ KI +++ K+K Q Q + LYK N++ + + Sbjct: 178 SQINQEKMQDIQLKIADIQAKYKDKKDMQSKQKQQLEIQALYKKENMSQFSALAGSFAPL 237 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 P FAIY ++ + ++ + +A + G + + +++ + + M Sbjct: 238 PFLFAIYAIVRSTRALK----IAAVGPIALIEGPWQQITSGNYIYIIILAIYLPLQAVSM 293 Query: 498 SLSMFIQMKMS--------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 L +QMK + K Q ++ M VF+ + S G+ IYW +S+V+ Sbjct: 294 LLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVMMFVFIIIIVSVATGVCIYWIFSSVLQ 353 Query: 550 IVQQAVIMKMHGAEIGLIDRLRST 573 I+Q + ++ R Sbjct: 354 IIQTYAFYLYNEKRRKAGNQERQR 377 >gi|115433064|ref|XP_001216669.1| predicted protein [Aspergillus terreus NIH2624] gi|114189521|gb|EAU31221.1| predicted protein [Aspergillus terreus NIH2624] Length = 504 Score = 110 bits (276), Expect = 6e-22, Method: Composition-based stats. Identities = 57/307 (18%), Positives = 108/307 (35%), Gaps = 35/307 (11%) Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 + P+ + ++ S A +A + + + P Y Sbjct: 57 AWRPASALPAMTATRFNSTSSASPPPADAAAATPPTTTTPASDLSDVSVDLASIPEDIGY 116 Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAK 380 K L +D+GW + + ++ +F+ G + +I+ + V+L Sbjct: 117 LKALG-------LDYGWGP--SSLIEYVIEHFHIWGGLPWWASIVGAGLLVRLALLKPML 167 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPI 433 ++ + N++ LR K + + Q M+Q L+ H + P P Sbjct: 168 GAADTSTKINNLRDVSTPLRTKMTTAAREGKQTEMMQARMELNNLHAQHGVKPWKSFVP- 226 Query: 434 LLQIPVFFAIYKVISISLEMRHAP----FWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 LLQ+P+ F Y+V+ + GWIKDL ADP + L YL Sbjct: 227 LLQVPLGFGCYRVVKGMTALPVPGLALESVGWIKDLTVADPYFVLPATTALFMYL----- 281 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 S + ++ M L MP + +S FP+ L +Y+ + + Sbjct: 282 --------SFRKGGESGINNLTNSSLGKMFLYGMPAMTFAFMSFFPSALQLYFVATGAFA 333 Query: 550 IVQQAVI 556 + Q ++ Sbjct: 334 LGQSYLL 340 >gi|300933178|ref|ZP_07148434.1| putative preprotein translocase subunit [Corynebacterium resistens DSM 45100] Length = 327 Score = 110 bits (276), Expect = 6e-22, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 109/291 (37%), Gaps = 55/291 (18%) Query: 341 FIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 ++ K + ++ +++L + I+I++ V ++ L FPLA +QY S ++ N Sbjct: 3 YVQKLVAWVLKLWHSLFAGFLGLDASTAWVISIVMLVVTIRGLLFPLAYRQYASGRHLVN 62 Query: 392 IQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++P + L ++K +K +L K + + GC P L+Q+P+ A+Y+++ Sbjct: 63 LRPSLRRLNAEYKGKKDAEARKEKLARERELRKNSDYKMVDGCIPALIQVPLIIALYQLL 122 Query: 448 ---SISLEMRHAPFWGWIKDLAAADPTNIF-----------------------------T 475 + +E AP G L + D ++ Sbjct: 123 LRIARPVEGIDAPHHG-FGSLTSEDVSHFLDARLFDVPISSYHIMNANTLAELGTTRSSV 181 Query: 476 LFGILPF-YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSS 533 + LP W M +Q A +G ++ P +F+F L Sbjct: 182 FWLALPLATCAAVFTTANWAYTMKR--NLQTVDHESFAARGFMKLMWVFGPFLFLFPLVF 239 Query: 534 -----FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 P +++YW SN+ + +Q +I + + R ++ Sbjct: 240 GLLGPAPIAILMYWVCSNLWTAMQTFIIQRTLDKRVPYTTEFREYHAEQKQ 290 >gi|319653028|ref|ZP_08007133.1| hypothetical protein HMPREF1013_03748 [Bacillus sp. 2_A_57_CT2] gi|317395377|gb|EFV76110.1| hypothetical protein HMPREF1013_03748 [Bacillus sp. 2_A_57_CT2] Length = 177 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 83/193 (43%), Gaps = 25/193 (12%) Query: 387 ANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 M ++P+++++++K K + Q LQ+ M LY++H +NPL AGC PI +Q+P+ Sbjct: 3 EKMDKLKPELEKIQQKLKTAKKPQEQQKLQQEMFGLYQSHGVNPLNAAGCLPIFIQMPIL 62 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + I + E+ F + +L +D I + GI+ + L Sbjct: 63 MGFFYAIRGNQEIAAHSFLWF--NLGHSD-IWITIIAGIVYY----------------LQ 103 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + K +I PV+ + + PA L +YW+ + + Q + +++ Sbjct: 104 YRFTLTNMTAQTPKQMKLIGLLSPVMIMLVSLNAPAALPLYWTAGGIFLVFQSWLGRRLY 163 Query: 561 GAEIGLIDRLRST 573 + ++ S Sbjct: 164 TKDKPDAVQIMSE 176 >gi|300789488|ref|YP_003769779.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei U32] gi|299799002|gb|ADJ49377.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei U32] Length = 214 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 85/222 (38%), Gaps = 13/222 (5%) Query: 339 FYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 F F+ P+ + L G + +AI++ T+ V+LL PLA+ + P+I Sbjct: 2 FGFLDVPVEGAYHLIHVLTGPLSTALAIVVFTLGVRLLLHPLARSAARGERARTALLPEI 61 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 LREK + + L M +L + + GC P+LLQ+P F +Y++ + + Sbjct: 62 TALREKHGRD-RERLAAEMTKLQQESGTSLFVGCLPMLLQLPFFMVMYRLFTTATIGGEP 120 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 L + ++ G V + + + P AD Sbjct: 121 NSLLGATLLGTPLGAHGLAGSPLVFVIAAGLAVVAWFSV----------RRQPAAADVPG 170 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +L +P V A P IY + S ++A++ + Sbjct: 171 GKLLRLLPYGTVLATLVVPQAAGIYLLTTTAWSAAERALLRR 212 >gi|297194184|ref|ZP_06911582.1| membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|297152155|gb|EFH31560.1| membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 245 Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 16/204 (7%) Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS--PPQVLQKAMIQLYKTHNINPL 427 V+L PL++ + P++ ELR K+ + + LQKA ++LY ++PL Sbjct: 34 LVRLAVHPLSRAAARGQKARTRLAPQLAELRVKYGSNAKDAERLQKATMELYAREKVSPL 93 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT--LFGILPFYLP 485 +GC P LLQ+P FF +Y + S E+ P L A +T L F Sbjct: 94 SGCLPSLLQLPAFFLMYHLFSN-AEIGGEPNGLLGHALFDAPLGGRWTDALADGGMFGGA 152 Query: 486 GFMHVGIWPIIMSLSMFI------QMKMSPP--PADKGQAMILNWMPVVFVFALSS---F 534 G ++V ++ I+ +++ F QM +P G + +P++ F L++ Sbjct: 153 GLVYVALFVIVAAVATFTYRRTKRQMAAAPMTGEQMPGMVAMTKVVPLLSFFTLATVAVV 212 Query: 535 PAGLIIYWSWSNVISIVQQAVIMK 558 P +Y S + V++ + + Sbjct: 213 PLAAALYVVTSTTWTAVERVFLYR 236 >gi|257462451|ref|ZP_05626864.1| inner membrane protein [Fusobacterium sp. D12] gi|317060110|ref|ZP_07924595.1| inner membrane protein YIDC [Fusobacterium sp. D12] gi|313685786|gb|EFS22621.1| inner membrane protein YIDC [Fusobacterium sp. D12] Length = 125 Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 21/141 (14%) Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 H +NP GC P+++Q+P+ FA++ V+ + + + W++ L DP IF Sbjct: 6 KHKVNPAGGCLPLIIQLPILFALFGVLRGGI-IPEDSKFLWLE-LTKPDPFYIF------ 57 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 P++ F Q K+ + ++ P++ +F P GL + Sbjct: 58 -------------PLLNGAVSFFQQKLMGNSDNPQMKNMMYMFPIMMIFISYKMPGGLQL 104 Query: 541 YWSWSNVISIVQQAVIMKMHG 561 YW S++ +++QQ IMK Sbjct: 105 YWLTSSLTAVLQQYFIMKKGD 125 >gi|50405829|ref|XP_456555.1| DEHA2A05368p [Debaryomyces hansenii CBS767] gi|49652219|emb|CAG84510.1| DEHA2A05368p [Debaryomyces hansenii] Length = 374 Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 102/228 (44%), Gaps = 27/228 (11%) Query: 346 MFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + L+ Y + G + I++TTV V+ + FPL K ++ A M I+P++D++ ++ + Sbjct: 97 IERLLEYSHVYTGLPWWATIIVTTVAVRSVMFPLYVKASINGAKMAKIKPELDQVMQELR 156 Query: 405 QSP-PQVLQKAMIQ---LYKTHNINPLAGCWPILLQIPV----FFAIYKVISISLEMRHA 456 ++ PQ +A + L K ++++ +P+L Q+P+ F + K+ + +E Sbjct: 157 EAENPQEQVQAAHKRKALMKDNDVHMSHQMFPVL-QLPIAYGFFQGLRKMANHPVEGFST 215 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM-FIQMKMSPPPADKG 515 W DL DP + + +SM + + + Sbjct: 216 QGNAWFADLTQVDPYCGLQIISAA----------------VVVSMVRLGGETGAAAMNPM 259 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ ++P++ +F A +++Y++ +++ S +Q V+ + + Sbjct: 260 MKKVMTYVPILSIFITKELSAAVVLYFAANSIFSFIQALVLRNKYFRK 307 >gi|317057908|ref|YP_004106375.1| membrane protein insertase, YidC/Oxa1 family [Ruminococcus albus 7] gi|315450177|gb|ADU23741.1| membrane protein insertase, YidC/Oxa1 family [Ruminococcus albus 7] Length = 465 Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 70/113 (61%), Gaps = 1/113 (0%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F IA P+ +M Y + N+GIA+++ T+ KL+ FPL+ KQ S A++ ++PK+DE Sbjct: 2 FDLIAIPLGWIMKGCYYVFKNYGIALLVFTLITKLIVFPLSVKQEKSMASIAMLKPKLDE 61 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 L +K+ ++ Q LQ+ + LY +NP+A C PIL+ + + FA+ VI L Sbjct: 62 LEKKYGKNK-QKLQEEQMALYSETGVNPMASCLPILVMMLILFAMIPVIYGPL 113 Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 3/88 (3%) Query: 495 IIMSLSMFIQMKMSPPPADKG--QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + +S + K +P A ++ MP+ ++ +P GL IYW +S++ SI+Q Sbjct: 288 LTTIISQYYTKKNNPSAAKMTGSNNAVMYIMPLFSLWITFKYPIGLGIYWCFSSLFSIIQ 347 Query: 553 QAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 ++ K++ E + + + +K S Sbjct: 348 MIILKKIYTPE-HVAELVEKDMAKKKTS 374 >gi|238883319|gb|EEQ46957.1| conserved hypothetical protein [Candida albicans WO-1] Length = 374 Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 119/312 (38%), Gaps = 44/312 (14%) Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITT---TNFLFAGAKEFPTIHHYEKDLA 326 F+ S + +N T P + ++ +G + + ++ Sbjct: 5 GLTRSFRATSASLKTVRVGIPSNIATRSPLIYSSIRFNSSTTTSGTEIQDKLTSFDDTTT 64 Query: 327 IPRFEMLIDW---------------GWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVF 370 E + + GW + L+ + G + I++ T+ Sbjct: 65 SAVLENVTNLHSDQLGYLQSIGLAQGWGP--TSLIERLLEVTHVYTGLPWWGTIVVATIA 122 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ---LYKTHNINPL 427 V+L+ FPL + + M I+P+IDEL ++ K +AM + + K + ++ L Sbjct: 123 VRLVLFPLYVRASSNATKMSKIKPQIDELLQQIKTGDTVDQMRAMEKRRLIMKENGVSTL 182 Query: 428 AGCWPILLQIP----VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 A +P +Q+P F A+ K+ + ++E + W ++L DP L I Sbjct: 183 ATLFPA-VQLPLAYGFFQALRKMANHNVEGFSDQGYAWFQNLIEVDPY--LGLQAISAAA 239 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 + + VG + G ++ +P+ +F F + +I+Y++ Sbjct: 240 IIAVVRVGG-------------ETGQHAMAAGMKKVMTVVPIASIFITKGFASAIILYFA 286 Query: 544 WSNVISIVQQAV 555 +++ S++Q ++ Sbjct: 287 VNSIFSLIQSSL 298 >gi|116073512|ref|ZP_01470774.1| putative inner membrane protein translocase component YidC [Synechococcus sp. RS9916] gi|116068817|gb|EAU74569.1| putative inner membrane protein translocase component YidC [Synechococcus sp. RS9916] Length = 380 Score = 110 bits (275), Expect = 8e-22, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 5/165 (3%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + Sbjct: 2 IGYISDNLLIPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQ 61 Query: 398 ELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 + + + K + PQ Q+ + +L K +PLAGC P+L+Q+P+ FA++ + S Sbjct: 62