HHsearch alignment for GI: 254780484 and conserved domain: CHL00071

>CHL00071 tufA elongation factor Tu.
Probab=99.54  E-value=2.1e-13  Score=96.23  Aligned_cols=153  Identities=14%  Similarity=0.203  Sum_probs=100.7

Q ss_pred             EEEEECCCCCCHHHHHHHHHCCCCE-----EE---ECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHH
Q ss_conf             8999748998898999997389737-----98---738884145212026655567850896499997600101112244
Q gi|254780484|r   31 EIAFSGRSNVGKSSLINILVNRKNL-----AR---TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKK  102 (212)
Q Consensus        31 ~VaivG~~NvGKSSLiNaL~g~~~~-----a~---~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~  102 (212)
T Consensus        14 ni~~~GHVD~GKSTL~g~L~~~~~~~~~~~~~~~~~~D~~~eEr~rGiTid~~~~~~et~~~~~~~iD~PGH~~fv~n--   91 (409)
T CHL00071         14 NIGTIGHVDHGKTTLTAAITMTLAANGGAKGKKYDEIDSAPEEKARGITINTAHVEYETENRHYAHVDCPGHADYVKN--   91 (409)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCCEEEECEEEEECCCEEEEEEECCCHHHHHHH--
T ss_conf             999995458839999999864530045133431553237976873694488024899628759999867967899999--


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC-CCCCCCCCHHHHHHHHH-HHHHHHHH
Q ss_conf             78988889987777664200000112235788754545543210257532212-22211110246899999-99999753
Q gi|254780484|r  103 NVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV-LTKIDKLSPTTAQETLE-KTKYLIRN  180 (212)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~nK~D~~~~~~~~~~~~-~~~~~~~~  180 (212)
T Consensus        92 -----------mi~Gas~aD~alLVV~A~~G~~~QTkEHl~l~~~lgV~~~IVavnKmD~v~~~~~~e~i~~~i~~~l~~  160 (409)
T CHL00071         92 -----------MITGAAQMDGAILVVSAADGPMPQTKEHILLAKQVGVPNIVVFLNKEDQVDDEELLELVELEVRELLDK  160 (409)
T ss_pred             -----------HHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             -----------875230158128999868788500499999999739993655555679854899999999999999997


Q ss_pred             CCC--CCCCEEEEECCCC
Q ss_conf             136--8986899988888
Q gi|254780484|r  181 YPT--AHPEVIPTSSVKR  196 (212)
Q Consensus       181 ~~~--~~~~i~~vSA~~g  196 (212)
T Consensus       161 ~g~~~~~i~~vp~sa~~~  178 (409)
T CHL00071        161 YDFPGDEIPIVAGSALLA  178 (409)
T ss_pred             CCCCCCCCEEEECCHHHH
T ss_conf             399845560896521332