HHsearch alignment for GI: 254780484 and conserved domain: COG1084
>COG1084 Predicted GTPase [General function prediction only].
Probab=99.90 E-value=4.2e-23 Score=151.98 Aligned_cols=173 Identities=20% Similarity=0.270 Sum_probs=119.5
Q ss_pred CCHHHCC--CCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHH
Q ss_conf 6567588--76686899974899889899999738973798738884145212026655567850896499997600101
Q gi|254780484|r 19 PEIGLLP--KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGY 96 (212)
Q Consensus 19 ~~~~~~P--~~~~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~ 96 (212)
T Consensus 156 ~~l~~LP~Idp~~pTivVaG~PNVGKSSlv~~lT~Ak--pEvA~YPFTTK~i~v------Ghfe~~~~R~QvIDTPGlLD 227 (346)
T COG1084 156 DHLKKLPAIDPDLPTIVVAGYPNVGKSSLVRKLTTAK--PEVAPYPFTTKGIHV------GHFERGYLRIQVIDTPGLLD 227 (346)
T ss_pred HHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCC--CCCCCCCCCCCCEEE------EEEECCCCEEEEECCCCCCC
T ss_conf 9985088779999738985699875899998875489--766788853365467------65504870589842886457
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 112244789888899877776642000001122----3578875454554321025753221222211110246899999
Q gi|254780484|r 97 ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID----CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE 172 (212)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~ 172 (212)
T Consensus 228 RPl~ErN~IE~qAi~AL~----hl~~~IlF~~D~Se~cgy~lE~Q~~L~~eIk~~f~~p~v~V~nK~D~~~~e~~~~~~~ 303 (346)
T COG1084 228 RPLEERNEIERQAILALR----HLAGVILFLFDPSETCGYSLEEQISLLEEIKELFKAPIVVVINKIDIADEEKLEEIEA 303 (346)
T ss_pred CCHHHHCHHHHHHHHHHH----HHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH
T ss_conf 885773689999999999----7428589997685002899999999999999853887699974101246667899999
Q ss_pred HHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999975313689868999888889989999999987
Q gi|254780484|r 173 KTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 (212)
Q Consensus 173 ~~~~~~~~~~~~~~~i~~vSA~~g~Gi~eL~~~I~~~ 209 (212)
T Consensus 304 ~~~~------~~~~~~~~~~~~~~~~~d~~~~~v~~~ 334 (346)
T COG1084 304 SVLE------EGGEEPLKISATKGCGLDKLREEVRKT 334 (346)
T ss_pred HHHH------HCCCCCCCEEEEEHHHHHHHHHHHHHH
T ss_conf 9876------326554313543000178899999887