HHsearch alignment for GI: 254780484 and conserved domain: COG1163

Probab=99.80  E-value=1.8e-19  Score=131.02  Aligned_cols=169  Identities=20%  Similarity=0.162  Sum_probs=104.3

Q ss_pred             CCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHH
Q ss_conf             88766868999748998898999997389737987388841452120266555678508964999976001011122447
Q gi|254780484|r   24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKN  103 (212)
Q Consensus        24 ~P~~~~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~  103 (212)
T Consensus        58 V~KsGda~v~lVGfPsvGKStLL~~LTnt~s--eva~y~FTTl~~------vPG~l~Y~ga~IQild~Pgii~gas~g~g  129 (365)
T COG1163          58 VKKSGDATVALVGFPSVGKSTLLNKLTNTKS--EVADYPFTTLEP------VPGMLEYKGAQIQLLDLPGIIEGASSGRG  129 (365)
T ss_pred             EECCCCEEEEEECCCCCCHHHHHHHHHCCCC--CCCCCCCEECCC------CCCEEEECCCEEEEECCCCCCCCCCCCCC
T ss_conf             7425773899976887458999988768876--434567410244------57447547816999727631257656888


Q ss_pred             HHH------------------------HHHHH-HHHHHHHHHHC----C-------------------------------
Q ss_conf             898------------------------88899-87777664200----0-------------------------------
Q gi|254780484|r  104 VDS------------------------WGGLI-VRYLSERSTLR----C-------------------------------  123 (212)
Q Consensus       104 ~~~------------------------~~~~~-~~~~~~~~~~~----~-------------------------------  123 (212)
T Consensus       130 rG~~vls~~R~ADlIiiVld~~~~~~~~~~i~~ELe~~GIrlnk~~p~V~I~kk~~gGI~i~~t~~l~~~d~~~ir~iL~  209 (365)
T COG1163         130 RGRQVLSVARNADLIIIVLDVFEDPHHRDIIERELEDVGIRLNKRPPDVTIKKKESGGIRINGTGPLTHLDEDTVRAILR  209 (365)
T ss_pred             CCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHH
T ss_conf             76465465215888999971688824889999999856768217999659999525987980454566689999999999


Q ss_pred             --CCCCCC--CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCH
Q ss_conf             --001122--3578875454554321025753221222211110246899999999997531368986899988888998
Q gi|254780484|r  124 --VYLLID--CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI  199 (212)
Q Consensus       124 --~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vSA~~g~Gi  199 (212)
T Consensus       210 Ey~I~nA~V~Ir~dvTlDd~id~l~~nrvY~p~l~v~NKiD~~~~e~~~~----l~~--------~~~~v~isa~~~~nl  277 (365)
T COG1163         210 EYRIHNADVLIREDVTLDDLIDALEGNRVYKPALYVVNKIDLPGLEELER----LAR--------KPNSVPISAKKGINL  277 (365)
T ss_pred             HHCCCCEEEEEECCCCHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHH----HHH--------CCCEEEEECCCCCCH
T ss_conf             72836306999468868999999841621323689995255668788999----973--------456289865568798


Q ss_pred             HHHHHHHHHHHCC
Q ss_conf             9999999987287
Q gi|254780484|r  200 EVLRKAILETINY  212 (212)
Q Consensus       200 ~eL~~~I~~~l~~  212 (212)
T Consensus       278 d~L~e~i~~~L~l  290 (365)
T COG1163         278 DELKERIWDVLGL  290 (365)
T ss_pred             HHHHHHHHHHHCE
T ss_conf             8999999987481