HHsearch alignment for GI: 254780484 and conserved domain: COG2262
>COG2262 HflX GTPases [General function prediction only].
Probab=99.90 E-value=2e-23 Score=153.80 Aligned_cols=164 Identities=20% Similarity=0.205 Sum_probs=112.2
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 76686899974899889899999738973798738884145212026655567850896499997600101112244789
Q gi|254780484|r 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVD 105 (212)
Q Consensus 26 ~~~~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~ 105 (212)
T Consensus 189 ~~~~p~vaLvGYTNAGKSTL~N~LT~~~~~--~~d~LFATLdpttR~-----~~l~~g~~vlLtDTVGFI~~LP~~LV~A 261 (411)
T COG2262 189 RSGIPLVALVGYTNAGKSTLFNALTGADVY--VADQLFATLDPTTRR-----IELGDGRKVLLTDTVGFIRDLPHPLVEA 261 (411)
T ss_pred CCCCCEEEEEEECCCCHHHHHHHHHCCCEE--CCCCCCCCCCCCEEE-----EEECCCCEEEEECCCCCCCCCCHHHHHH
T ss_conf 169975898732344499999887245713--046664210574048-----9807996499865756715598679999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH----HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 8888998777766420000011223578875454----554321025753221222211110246899999999997531
Q gi|254780484|r 106 SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ----DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 (212)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~ 181 (212)
T Consensus 262 FksTLEE-----~~~aDlllhVVDaSdp~~~~~~~~v~~vL~el~~~~~p~i~v~NKiD~~~~~~~---~~~~----~~- 328 (411)
T COG2262 262 FKSTLEE-----VKEADLLLHVVDASDPEILEKLEAVEDVLAEIGADEIPIILVLNKIDLLEDEEI---LAEL----ER- 328 (411)
T ss_pred HHHHHHH-----HHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHH---HHHH----HH-
T ss_conf 9998987-----622777999740688518999999999999748899978999764101573222---3456----63-
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 368986899988888998999999998728
Q gi|254780484|r 182 PTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 (212)
Q Consensus 182 ~~~~~~i~~vSA~~g~Gi~eL~~~I~~~l~ 211 (212)
T Consensus 329 --~~~~~v~iSA~~~~gl~~L~~~i~~~l~ 356 (411)
T COG2262 329 --GSPNPVFISAKTGEGLDLLRERIIELLS 356 (411)
T ss_pred --CCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf --4897489980667598999999999863