HHsearch alignment for GI: 254780484 and conserved domain: KOG0088
>KOG0088 consensus.
Probab=98.35 E-value=2e-07 Score=61.86 Aligned_cols=151 Identities=21% Similarity=0.165 Sum_probs=85.3
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCCEEE---ECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 899974899889899999738973798---73888414521202665556785089649999760010111224478988
Q gi|254780484|r 31 EIAFSGRSNVGKSSLINILVNRKNLAR---TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSW 107 (212)
Q Consensus 31 ~VaivG~~NvGKSSLiNaL~g~~~~a~---~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~ 107 (212)
T Consensus 15 K~VLLGEGCVGKtSLVLRy~EnkFn~kHlsTlQASF~~kk---------~n~ed~ra~L~IWDTAGQErfHALGPIYYR- 84 (218)
T KOG0088 15 KIVLLGEGCVGKTSLVLRYVENKFNCKHLSTLQASFQNKK---------VNVEDCRADLHIWDTAGQERFHALGPIYYR- 84 (218)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC---------CCCCCCEEEEEEEECCCHHHHHCCCCEEEE-
T ss_conf 8999748755606899999872323046789998876330---------462111311432124445765235753770-
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCC-----CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 8899877776642000001122357-----88754545543210257532212222111102468999999999975313
Q gi|254780484|r 108 GGLIVRYLSERSTLRCVYLLIDCRH-----GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 (212)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~ 182 (212)
T Consensus 85 ------------gSnGalLVyDITDrdSFqKVKnWV~El-r~mlGnei~l~IVGNKiDLEee--R~Vt~qeAe~YAes-- 147 (218)
T KOG0088 85 ------------GSNGALLVYDITDRDSFQKVKNWVLEL-RTMLGNEIELLIVGNKIDLEEE--RQVTRQEAEAYAES-- 147 (218)
T ss_pred ------------CCCCEEEEEECCCHHHHHHHHHHHHHH-HHHHCCEEEEEEECCCCCHHHH--HHHHHHHHHHHHHH--
T ss_conf ------------799628998644468899999999999-9871883599995374467886--42029889999986--
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 689868999888889989999999987
Q gi|254780484|r 183 TAHPEVIPTSSVKRKGIEVLRKAILET 209 (212)
Q Consensus 183 ~~~~~i~~vSA~~g~Gi~eL~~~I~~~ 209 (212)
T Consensus 148 -vGA~y~eTSAk~N~Gi~elFe~Lt~~ 173 (218)
T KOG0088 148 -VGALYMETSAKDNVGISELFESLTAK 173 (218)
T ss_pred -HCHHHEECCCCCCCCHHHHHHHHHHH
T ss_conf -33343111110243799999999999