HHsearch alignment for GI: 254780484 and conserved domain: KOG3886
>KOG3886 consensus.
Probab=97.09 E-value=0.0006 Score=41.81 Aligned_cols=151 Identities=19% Similarity=0.196 Sum_probs=81.2
Q ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEE-ECCCEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 8689997489988989999973897379873888414521202665556785-089649999760010111224478988
Q gi|254780484|r 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK-NNLPAMALVDMPGYGYARAPKKNVDSW 107 (212)
Q Consensus 29 ~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~-~~~~~~~~~DtpG~~~~~~~~~~~~~~ 107 (212)
T Consensus 4 ~kKvlLMGrsGsGKsSmrsiiF~ny-~a~D~~rlg~tidv------eHsh~RflGnl~LnlwDcggqe~fme---n---- 69 (295)
T KOG3886 4 KKKVLLMGRSGSGKSSMRSIIFANY-IARDTRRLGATIDV------EHSHVRFLGNLVLNLWDCGGQEEFME---N---- 69 (295)
T ss_pred CCEEEEECCCCCCCCCCCHHHHHHH-HHHHHHCCCCCCEE------EEHHHHHHHHHEEEHHCCCCCHHHHH---H----
T ss_conf 0238885047887434520566656-56655166886116------64354442001000213678099999---8----
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 88998777766420000011223578875454554321------025753221222211110246899999999997531
Q gi|254780484|r 108 GGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL------DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 (212)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~ 181 (212)
T Consensus 70 -~~~~q~d~iF~nv~vli~vFDves~e~~~D~~~yqk~Le~ll~~SP~AkiF~l~hKmDLv~~d~r~~if~~r~~~l~~~ 148 (295)
T KOG3886 70 -YLSSQEDNIFRNVQVLIYVFDVESREMEKDFHYYQKCLEALLQNSPEAKIFCLLHKMDLVQEDARELIFQRRKEDLRRL 148 (295)
T ss_pred -HHHHCCHHHHEEHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECHHCCCCHHHHHHHHHHHHHHHH
T ss_conf -8763200101002114665421213666648999999999985397423777874030002560789999999999996
Q ss_pred CC-CCCCEEEEECC
Q ss_conf 36-89868999888
Q gi|254780484|r 182 PT-AHPEVIPTSSV 194 (212)
Q Consensus 182 ~~-~~~~i~~vSA~ 194 (212)
T Consensus 149 s~~~~~~~f~Tsiw 162 (295)
T KOG3886 149 SRPLECKCFPTSIW 162 (295)
T ss_pred CCCCCCCCCCCCHH
T ss_conf 04213354554212