HHsearch alignment for GI: 254780484 and conserved domain: PRK05306
>PRK05306 infB translation initiation factor IF-2; Validated.
Probab=99.84 E-value=3.7e-20 Score=135.03 Aligned_cols=161 Identities=23% Similarity=0.329 Sum_probs=123.6
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 76686899974899889899999738973798738884145212026655567850896499997600101112244789
Q gi|254780484|r 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVD 105 (212)
Q Consensus 26 ~~~~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~ 105 (212)
T Consensus 338 ~~r~pvvt~mghvdhgkt~lld~~r~~~v~--~~e~ggitq~iga~~v~-----~~~~~~itf~dtpgh~af~------- 403 (839)
T PRK05306 338 VPRPPVVTIMGHVDHGKTSLLDAIRKTKVA--AGEAGGITQHIGAYQVE-----TENGKKITFLDTPGHEAFT------- 403 (839)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCCCCCCCCEEEEEEEE-----ECCCCEEEEECCCCHHHHH-------
T ss_conf 668988988577467731489998628753--55678755222349999-----5699879985588558899-------
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHHHHHHHCCC
Q ss_conf 8888998777766420000011223578875454554321025753221222211110--24689999999999753136
Q gi|254780484|r 106 SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS--PTTAQETLEKTKYLIRNYPT 183 (212)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~--~~~~~~~~~~~~~~~~~~~~ 183 (212)
T Consensus 404 ------~mr~rga~~tdi~ilvvaaddgv~pqt~eai~~~~~a~vp~ivaink~d~~~a~~~~v~~~l~~-~~~~~e~~g 476 (839)
T PRK05306 404 ------AMRARGAQVTDIVVLVVAADDGVMPQTIEAINHAKAAGVPIIVAINKIDKPGANPDRVKQELTE-YGLVPEEWG 476 (839)
T ss_pred ------HHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHH-CCCCHHHCC
T ss_conf ------9986357654369999977777567789999999974998899974046788988999999998-498645428
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 898689998888899899999999
Q gi|254780484|r 184 AHPEVIPTSSVKRKGIEVLRKAIL 207 (212)
Q Consensus 184 ~~~~i~~vSA~~g~Gi~eL~~~I~ 207 (212)
T Consensus 477 g~~~~v~~sa~~~~~~~~l~e~i~ 500 (839)
T PRK05306 477 GDTIFVPVSAKTGEGIDELLEAIL 500 (839)
T ss_pred CCEEEEEEEECCCCCHHHHHHHHH
T ss_conf 944899815157887899999999