HHsearch alignment for GI: 254780484 and conserved domain: PRK11537

>PRK11537 putative GTP-binding protein YjiA; Provisional.
Probab=97.30  E-value=0.0033  Score=37.58  Aligned_cols=132  Identities=16%  Similarity=0.090  Sum_probs=61.3

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHC----CCCEEEECCCCCEEEECCEEEEEEEEEEEE----------------------
Q ss_conf             686899974899889899999738----973798738884145212026655567850----------------------
Q gi|254780484|r   28 GPPEIAFSGRSNVGKSSLINILVN----RKNLARTSNAPGRTQHLNFFVPKDFSNLKN----------------------   81 (212)
Q Consensus        28 ~~p~VaivG~~NvGKSSLiNaL~g----~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~----------------------   81 (212)
T Consensus         3 ~IPVtiltGFLGaGKTTlL~~lL~~~~~~riaVivNEfGev~iD~~li~~~~~~v~eL~nGCiCCs~~~dl~~~l~~l~~   82 (317)
T PRK11537          3 PIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLD   82 (317)
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCEEEECCCCEEEEECCHHHHHHHHHHH
T ss_conf             76889983088889999999997277899789998376145332988735653268844773687305228999999998


Q ss_pred             ------CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf             ------89649999760010111224478988889987777664200000112235788754545543210257532212
Q gi|254780484|r   82 ------NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV  155 (212)
Q Consensus        82 ------~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  155 (212)
T Consensus        83 ~~~~~~~~~D~IiIEtsGlAdP~~I~~~~~-----~~~~l~~~~~Ld~vVtvVDa~~~~~~l~~-~~~~~~Qi~~AD~il  156 (317)
T PRK11537         83 NLDRGNIQFDRLVIECTGMADPGPIIQTFF-----SHEVLCQRYLLDGVIALVDAVHADEQMNQ-FTIAQSQVGYADRIL  156 (317)
T ss_pred             HHHCCCCCCCEEEEECCCCCCHHHHHHHHH-----HHHHHHHHEECCCEEEEEEHHHHHHHHHC-CHHHHHHHHHCCEEE
T ss_conf             664357775479996257788399999986-----12565653203655999866555766530-346676663186899


Q ss_pred             CCCCCCCCHH
Q ss_conf             2221111024
Q gi|254780484|r  156 LTKIDKLSPT  165 (212)
Q Consensus       156 ~nK~D~~~~~  165 (212)
T Consensus       157 lnK~Dlv~~~  166 (317)
T PRK11537        157 LTKTDVAGEA  166 (317)
T ss_pred             EECCCCCCHH
T ss_conf             7420023659