HHsearch alignment for GI: 254780484 and conserved domain: PRK11537
>PRK11537 putative GTP-binding protein YjiA; Provisional.
Probab=97.30 E-value=0.0033 Score=37.58 Aligned_cols=132 Identities=16% Similarity=0.090 Sum_probs=61.3
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHC----CCCEEEECCCCCEEEECCEEEEEEEEEEEE----------------------
Q ss_conf 686899974899889899999738----973798738884145212026655567850----------------------
Q gi|254780484|r 28 GPPEIAFSGRSNVGKSSLINILVN----RKNLARTSNAPGRTQHLNFFVPKDFSNLKN---------------------- 81 (212)
Q Consensus 28 ~~p~VaivG~~NvGKSSLiNaL~g----~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~---------------------- 81 (212)
T Consensus 3 ~IPVtiltGFLGaGKTTlL~~lL~~~~~~riaVivNEfGev~iD~~li~~~~~~v~eL~nGCiCCs~~~dl~~~l~~l~~ 82 (317)
T PRK11537 3 PIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLD 82 (317)
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCEEEECCCCEEEEECCHHHHHHHHHHH
T ss_conf 76889983088889999999997277899789998376145332988735653268844773687305228999999998
Q ss_pred ------CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf ------89649999760010111224478988889987777664200000112235788754545543210257532212
Q gi|254780484|r 82 ------NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 (212)
Q Consensus 82 ------~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 155 (212)
T Consensus 83 ~~~~~~~~~D~IiIEtsGlAdP~~I~~~~~-----~~~~l~~~~~Ld~vVtvVDa~~~~~~l~~-~~~~~~Qi~~AD~il 156 (317)
T PRK11537 83 NLDRGNIQFDRLVIECTGMADPGPIIQTFF-----SHEVLCQRYLLDGVIALVDAVHADEQMNQ-FTIAQSQVGYADRIL 156 (317)
T ss_pred HHHCCCCCCCEEEEECCCCCCHHHHHHHHH-----HHHHHHHHEECCCEEEEEEHHHHHHHHHC-CHHHHHHHHHCCEEE
T ss_conf 664357775479996257788399999986-----12565653203655999866555766530-346676663186899
Q ss_pred CCCCCCCCHH
Q ss_conf 2221111024
Q gi|254780484|r 156 LTKIDKLSPT 165 (212)
Q Consensus 156 ~nK~D~~~~~ 165 (212)
T Consensus 157 lnK~Dlv~~~ 166 (317)
T PRK11537 157 LTKTDVAGEA 166 (317)
T ss_pred EECCCCCCHH
T ss_conf 7420023659