HHsearch alignment for GI: 254780484 and conserved domain: PTZ00099
>PTZ00099 rab6; Provisional.
Probab=98.61 E-value=2.7e-07 Score=61.07 Aligned_cols=113 Identities=19% Similarity=0.139 Sum_probs=62.8
Q ss_pred EECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--CCHHHHHHHH--HHCCCCCCCCCC
Q ss_conf 508964999976001011122447898888998777766420000011223578--8754545543--210257532212
Q gi|254780484|r 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG--VKQIDQDVFS--FLDKKAVSYQIV 155 (212)
Q Consensus 80 ~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~v 155 (212)
T Consensus 25 ~~~~v~l~IWDTAGqE~f~sl~~~----------y~---r~a~~~ilVyDit~~~SF~~l~~W~~~i~~~~~~~~~iiLV 91 (176)
T PTZ00099 25 DEGPVRLQLWDTAGQERFRSLIPS----------YI---RDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALV 91 (176)
T ss_pred CCEEEEEEEEECCCCCCHHHHHHH----------HH---CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 999999999979986341357688----------70---79867999850420778999999999999853887743999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 2221111024689999999999753136898689998888899899999999872
Q gi|254780484|r 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 (212)
Q Consensus 156 ~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vSA~~g~Gi~eL~~~I~~~l 210 (212)
T Consensus 92 GNK~DL~~~r~V--~~ee~~~~A~~~---~~~f~EtSAktg~nV~e~F~~la~~i 141 (176)
T PTZ00099 92 GNKTDLGDLRKV--TYEEGMQKAQEY---NTMFHETSAKAGHNIKVLFKKIAAKL 141 (176)
T ss_pred EECCCHHHHCCC--CHHHHHHHHHHC---CCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 855655861685--999999999985---99999984899949899999999986