HHsearch alignment for GI: 254780484 and conserved domain: TIGR03375
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=96.60 E-value=0.0017 Score=39.25 Aligned_cols=23 Identities=35% Similarity=0.589 Sum_probs=21.4
Q ss_pred EEEEECCCCCCHHHHHHHHHCCC
Q ss_conf 89997489988989999973897
Q gi|254780484|r 31 EIAFSGRSNVGKSSLINILVNRK 53 (212)
Q Consensus 31 ~VaivG~~NvGKSSLiNaL~g~~ 53 (212)
T Consensus 493 ~vaIvG~sGsGKSTL~kll~Gl~ 515 (694)
T TIGR03375 493 KVAIIGRIGSGKSTLLKLLLGLY 515 (694)
T ss_pred EEEEEECCCCCHHHHHHHHCCCC
T ss_conf 89998058987889999855675