HHsearch alignment for GI: 254780484 and conserved domain: TIGR03594
>TIGR03594 GTPase_EngA ribosome-associated GTPase EngA. EngA (YfgK, Der) is a ribosome-associated essential GTPase with a duplication of its GTP-binding domain. It is broadly to universally distributed among bacteria. It appears to function in ribosome biogenesis or stability.
Probab=99.97 E-value=7.3e-30 Score=190.82 Aligned_cols=174 Identities=22% Similarity=0.294 Sum_probs=135.8
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 76686899974899889899999738973798738884145212026655567850896499997600101112244789
Q gi|254780484|r 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVD 105 (212)
Q Consensus 26 ~~~~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~ 105 (212)
T Consensus 169 ~~~~iriaivGrPNvGKSTl~N~ll~~~r-~ivs~~~GtTrD~------i~~~~~~~~~~~~~iDTaGirkk~k~~~~~e 241 (429)
T TIGR03594 169 EDGPIKIAIIGRPNVGKSTLVNALLGEER-VIVSDIAGTTRDS------IDIPFERNGKKYLLIDTAGIRRKGKVTEGIE 241 (429)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHH-HHCCCCCCCCCCC------EEEEEEECCEEEEEEECCCCCCCCCCCHHHH
T ss_conf 55652699974887654677777654333-2147999863102------6879999990899998988763664230477
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHHHHHHCCCC
Q ss_conf 8888998777766420000011223578875454554321025753221222211110246-899999999997531368
Q gi|254780484|r 106 SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLIRNYPTA 184 (212)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~-~~~~~~~~~~~~~~~~~~ 184 (212)
T Consensus 242 --~~s~~~t~~~i~~~dvvil~iD~~~~~~~qD~~i~~~i~~~~k~~ii~~NK~Dli~~~~~~~~~~~~i~~~l~--~~~ 317 (429)
T TIGR03594 242 --KYSVLRTLKAIERADVVLLVLDATEGITEQDLRIAGLALEAGKALIIVVNKWDLVKDEKTREEFKKELRRKLP--FLD 317 (429)
T ss_pred --HHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHCC--CCC
T ss_conf --9999999999874477999997665884888999998987399769999722303799999999999998562--368
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 98689998888899899999999872
Q gi|254780484|r 185 HPEVIPTSSVKRKGIEVLRKAILETI 210 (212)
Q Consensus 185 ~~~i~~vSA~~g~Gi~eL~~~I~~~l 210 (212)
T Consensus 318 ~~pI~fiSA~~g~gi~kl~~~i~~~~ 343 (429)
T TIGR03594 318 FAPIVFISALTGQGVDKLLDAIDEVY 343 (429)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 98689973457789999999999999