HHsearch alignment for GI: 254780484 and conserved domain: TIGR03597
>TIGR03597 GTPase_YqeH ribosome biogenesis GTPase YqeH. This family describes YqeH, a member of a larger family of GTPases involved in ribosome biogenesis. Like YqlF, it shows a cyclical permutation relative to GTPases EngA (in which the GTPase domain is duplicated), Era, and others. Members of this protein family are found in a relatively small number of bacterial species, including Bacillus subtilis but not Escherichia coli.
Probab=98.40 E-value=2.2e-06 Score=55.84 Aligned_cols=88 Identities=18% Similarity=0.155 Sum_probs=64.0
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
Q ss_conf 2000001122357887545455432102575322122221111024-689999999999753136898689998888899
Q gi|254780484|r 120 TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 (212)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~vSA~~g~G 198 (212)
T Consensus 63 ~~~lVv~VvDi~Df~gS~~~~l~~~~~--~~~v~lV~NK~DLLP~~~~~~~i~~wv~~~~~~~gl~~~~V~lvSa~~g~g 140 (360)
T TIGR03597 63 SNALIVYVVDIFDFEGSLIPELKRFVG--GNPVLLVGNKIDLLPKSVNLSKIKEWMKKRAKELGLKPVDIILVSAKKGNG 140 (360)
T ss_pred CCCEEEEEEECCCCCCCHHHHHHHHHC--CCCEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
T ss_conf 683799998641477653464999838--985899998054288767879999999999998599836689996888989
Q ss_pred HHHHHHHHHHH
Q ss_conf 89999999987
Q gi|254780484|r 199 IEVLRKAILET 209 (212)
Q Consensus 199 i~eL~~~I~~~ 209 (212)
T Consensus 141 i~~l~~~i~~~ 151 (360)
T TIGR03597 141 IDELLDKIKKA 151 (360)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999987