HHsearch alignment for GI: 254780484 and conserved domain: cd00882
>cd00882 Ras_like_GTPase Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulate initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Memb
Probab=99.54 E-value=1.8e-14 Score=102.30 Aligned_cols=152 Identities=17% Similarity=0.143 Sum_probs=86.9
Q ss_pred EECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97489988989999973897379873888414521202665556785089649999760010111224478988889987
Q gi|254780484|r 34 FSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVR 113 (212)
Q Consensus 34 ivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~~~ 113 (212)
T Consensus 1 vvG~~~~GKSsl~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~i~D~~g~~~~~~~~----------~~ 64 (157)
T cd00882 1 VVGDSGVGKTSLLNRLLGGEFV--PEEYETTIIDFY----SKTIEVDGKKVKLQIWDTAGQERFRSLR----------RL 64 (157)
T ss_pred CCCCCCCCHHHHHHHHHCCCCC--CCCCCCCEEEEE----EEEEEECCEEEEEEEEECCCCHHHHHHH----------HH
T ss_conf 9294996889999999719888--764687157899----9999999999999999858951156789----------99
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHH-----HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf 77766420000011223578875454-----5543210257532212222111102468999999999975313689868
Q gi|254780484|r 114 YLSERSTLRCVYLLIDCRHGVKQIDQ-----DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 (212)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i 188 (212)
T Consensus 65 ~---~~~~~~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~iiiv~nK~Dl~~~~~~~~~~-~~~~~---~~~~~~~~ 137 (157)
T cd00882 65 Y---YRGADGIILVYDVTDRESFENVKEWLLLILINKEGENIPIILVGNKIDLPEERVVSEEE-LAEQL---AKELGVPY 137 (157)
T ss_pred H---HHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHCCCCCHHH-HHHHH---HHHCCCEE
T ss_conf 9---75357999998658888899999999999997525898499998535615406688999-99999---98789869
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q ss_conf 99988888998999999998
Q gi|254780484|r 189 IPTSSVKRKGIEVLRKAILE 208 (212)
Q Consensus 189 ~~vSA~~g~Gi~eL~~~I~~ 208 (212)
T Consensus 138 ~~~Sa~~~~~i~~l~~~i~~ 157 (157)
T cd00882 138 FETSAKTGENVEELFEELAE 157 (157)
T ss_pred EEECCCCCCCHHHHHHHHHC
T ss_conf 99847888399999999859