HHsearch alignment for GI: 254780484 and conserved domain: cd01850
>cd01850 CDC_Septin CDC/Septin. Septins are a conserved family of GTP-binding proteins associated with diverse processes in dividing and non-dividing cells. They were first discovered in the budding yeast S. cerevisiae as a set of genes (CDC3, CDC10, CDC11 and CDC12) required for normal bud morphology. Septins are also present in metazoan cells, where they are required for cytokinesis in some systems, and implicated in a variety of other processes involving organization of the cell cortex and exocytosis. In humans, 12 septin genes generate dozens of polypeptides, many of which comprise heterooligomeric complexes. Since septin mutants are commonly defective in cytokinesis and formation of the neck formation of the neck filaments/septin rings, septins have been considered to be the primary constituents of the neck filaments. Septins belong to the GTPase superfamily for their conserved GTPase motifs and enzymatic activities.
Probab=99.02 E-value=7.3e-09 Score=70.07 Aligned_cols=150 Identities=24% Similarity=0.328 Sum_probs=80.3
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCCEEEECC-CCCEEEECCEEEE-EEEEEEEECC--CEEEEEECCHHHHHHH-HHHHH-
Q ss_conf 899974899889899999738973798738-8841452120266-5556785089--6499997600101112-24478-
Q gi|254780484|r 31 EIAFSGRSNVGKSSLINILVNRKNLARTSN-APGRTQHLNFFVP-KDFSNLKNNL--PAMALVDMPGYGYARA-PKKNV- 104 (212)
Q Consensus 31 ~VaivG~~NvGKSSLiNaL~g~~~~a~~~~-~p~tt~~~~~~~~-~~~~~~~~~~--~~~~~~DtpG~~~~~~-~~~~~- 104 (212)
T Consensus 6 nimVvG~sGlGKsTfiNtLf~~~~~~~~~~~~~~~~~~~~t~~i~~~~~~i~e~g~~l~LtviDTpGfGd~i~n~~~~~~ 85 (276)
T cd01850 6 NIMVVGESGLGKSTFINTLFNTKLIPSDYPPDPAEEHIDKTVEIKSSKAEIEENGVKLKLTVIDTPGFGDNINNSDCWKP 85 (276)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCCCCCCHHHHHHH
T ss_conf 99997689998899999974785778777788132056888258999999963998999999976884122360340999
Q ss_pred --HHHHHHHHHHHHH-----------HHHHCCCCCCC-CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf --9888899877776-----------64200000112-235788754545543210257532212222111102468999
Q gi|254780484|r 105 --DSWGGLIVRYLSE-----------RSTLRCVYLLI-DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQET 170 (212)
Q Consensus 105 --~~~~~~~~~~~~~-----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~ 170 (212)
T Consensus 86 I~~yI~~qf~~yl~eE~~i~R~~~~~D~RVH~cLYFI~Ptgh~L~~lDi~~mk~Ls-~~vNvIPVIaKADtlT~~El~~~ 164 (276)
T cd01850 86 IVDYIDDQFDQYLREESRIKRNPRIPDTRVHACLYFIEPTGHGLKPLDIEFMKRLS-KRVNIIPVIAKADTLTPEELKEF 164 (276)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHC-CCCCEEEEEECCCCCCHHHHHHH
T ss_conf 99999999999999985314578887774489999967888888799999999962-75645667851666999999999
Q ss_pred HHHHHHHHHHC
Q ss_conf 99999997531
Q gi|254780484|r 171 LEKTKYLIRNY 181 (212)
Q Consensus 171 ~~~~~~~~~~~ 181 (212)
T Consensus 165 K~~I~~~l~~~ 175 (276)
T cd01850 165 KQRIMEDIEEH 175 (276)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999985