HHsearch alignment for GI: 254780484 and conserved domain: cd01871

>cd01871 Rac1_like Rac1-like subfamily. The Rac1-like subfamily consists of Rac1, Rac2, and Rac3 proteins, plus the splice variant Rac1b that contains a 19-residue insertion near switch II relative to Rac1. While Rac1 is ubiquitously expressed, Rac2 and Rac3 are largely restricted to hematopoietic and neural tissues respectively. Rac1 stimulates the formation of actin lamellipodia and membrane ruffles. It also plays a role in cell-matrix adhesion and cell anoikis. In intestinal epithelial cells, Rac1 is an important regulator of migration and mediates apoptosis. Rac1 is also essential for RhoA-regulated actin stress fiber and focal adhesion complex formation. In leukocytes, Rac1 and Rac2 have distinct roles in regulating cell morphology, migration, and invasion, but are not essential for macrophage migration or chemotaxis. Rac3 has biochemical properties that are closely related to Rac1, such as effector interaction, nucleotide binding, and hydrolysis; Rac2 has a slower nucleoti
Probab=99.51  E-value=2.1e-13  Score=96.18  Aligned_cols=160  Identities=11%  Similarity=0.097  Sum_probs=85.0

Q ss_pred             CEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf             68999748998898999997389737987388841452120266555678508964999976001011122447898888
Q gi|254780484|r   30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG  109 (212)
Q Consensus        30 p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~  109 (212)
T Consensus         2 iKivlvGd~~VGKTsli~r~~~~~f~--~~~~~-Ti~~~----~~~~i~~~~~~v~l~iwDtaGqe~~~~~~~~------   68 (174)
T cd01871           2 IKCVVVGDGAVGKTCLLISYTTNAFP--GEYIP-TVFDN----YSANVMVDGKPVNLGLWDTAGQEDYDRLRPL------   68 (174)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHCCCC--CCCCC-EEEEE----EEEEEEECCEEEEEEEECCCCCCCCHHHHHH------
T ss_conf             69999899998699999999739999--98688-37887----6799999999999999869997240678899------


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCC--CCHHHHHHHHH--HCCCCCCCCCCCCCCCCCCHHHHHHHHHH-----H----HH
Q ss_conf             998777766420000011223578--87545455432--10257532212222111102468999999-----9----99
Q gi|254780484|r  110 LIVRYLSERSTLRCVYLLIDCRHG--VKQIDQDVFSF--LDKKAVSYQIVLTKIDKLSPTTAQETLEK-----T----KY  176 (212)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~v~nK~D~~~~~~~~~~~~~-----~----~~  176 (212)
T Consensus        69 ----~~~~a---~~~ilvydi~~~~SF~~i~~~w~~~i~~~~~~~piiLVGnK~DL~~~~~~~~~~~~~~~~~vs~~eg~  141 (174)
T cd01871          69 ----SYPQT---DVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGL  141 (174)
T ss_pred             ----HHHHC---CEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHH
T ss_conf             ----87406---68999986798788999999999999985889997987473013100456778865146775899999


Q ss_pred             HHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             9753136898689998888899899999999872
Q gi|254780484|r  177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI  210 (212)
Q Consensus       177 ~~~~~~~~~~~i~~vSA~~g~Gi~eL~~~I~~~l  210 (212)
T Consensus       142 ~~a~-~~~~~~f~EtSAk~~~nV~e~F~~lir~i  174 (174)
T cd01871         142 AMAK-EIGAVKYLECSALTQKGLKTVFDEAIRAV  174 (174)
T ss_pred             HHHH-HCCCCEEEECCCCCCCCHHHHHHHHHHHC
T ss_conf             9998-75997899918788959799999999519