>cd01884 EF_Tu EF-Tu subfamily. This subfamily includes orthologs of translation elongation factor EF-Tu in bacteria, mitochondria, and chloroplasts. It is one of several GTP-binding translation factors found in the larger family of GTP-binding elongation factors. The eukaryotic counterpart, eukaryotic translation elongation factor 1 (eEF-1 alpha), is excluded from this family. EF-Tu is one of the most abundant proteins in bacteria, as well as, one of the most highly conserved, and in a number of species the gene is duplicated with identical function. When bound to GTP, EF-Tu can form a complex with any (correctly) aminoacylated tRNA except those for initiation and for selenocysteine, in which case EF-Tu is replaced by other factors. Transfer RNA is carried to the ribosome in these complexes for protein translation.

Probab=99.74 E-value=4.5e-17 Score=117.30 Aligned_cols=167 Identities=16% Similarity=0.200 Sum_probs=110.6 Q ss_pred EEEEECCCCCCHHHHHHHHHCCC--C-E--EEE---CCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHH Q ss_conf 89997489988989999973897--3-7--987---38884145212026655567850896499997600101112244 Q gi|254780484|r 31 EIAFSGRSNVGKSSLINILVNRK--N-L--ART---SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKK 102 (212) Q Consensus 31 ~VaivG~~NvGKSSLiNaL~g~~--~-~--a~~---~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~ 102 (212) T Consensus 4 Ni~iiGHVDhGKTTL~~~l~~~~~~~~~~~~~~~~~~D~~~~EreRGiTI~~~~~~~~~~~~~~~~IDtPGH~dF~---- 79 (195) T cd01884 4 NVGTIGHVDHGKTTLTAAITKVLAKKGGAKFKKYDEIDKAPEEKARGITINTAHVEYETANRHYAHVDCPGHADYI---- 79 (195) T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHCCCCCCCCEEEEEECCCEEEEECCCCCHHHHH---- T ss_conf 9999960588698999999998866344441120010054666505886144189996088169962689607788---- Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC-CCCCCCCCCHHHHHHHHH-HHHHHHHH Q ss_conf 7898888998777766420000011223578875454554321025753221-222211110246899999-99999753 Q gi|254780484|r 103 NVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI-VLTKIDKLSPTTAQETLE-KTKYLIRN 180 (212) Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~nK~D~~~~~~~~~~~~-~~~~~~~~ 180 (212) T Consensus 80 ---------~~~i~g~~~~D~aiLVVdA~eGv~~QT~eh~~la~~lgi~~iiV~iNK~D~~~~~~~~~~v~~ei~~~l~~ 150 (195) T cd01884 80 ---------KNMITGAAQMDGAILVVSATDGPMPQTREHLLLARQVGVPYIVVFLNKADMVDDEELLELVEMEVRELLSK 150 (195) T ss_pred ---------HHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH T ss_conf ---------89986351136268998527787478999999999809996279996877898789999999999999984 Q ss_pred CCC--CCCCEEEEECCCCC----------CHHHHHHHHHHHH Q ss_conf 136--89868999888889----------9899999999872 Q gi|254780484|r 181 YPT--AHPEVIPTSSVKRK----------GIEVLRKAILETI 210 (212) Q Consensus 181 ~~~--~~~~i~~vSA~~g~----------Gi~eL~~~I~~~l 210 (212) T Consensus 151 ~g~~~~~~p~ip~Sa~~g~~~~~~~~~~~~i~~Lldai~~~i 192 (195) T cd01884 151 YGFDGDNTPIVRGSALKALEGDDPNKWVKKILELLDALDSYI 192 (195) T ss_pred CCCCCCCCEEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHC T ss_conf 299955682999773875357888755369999999999648

HHsearch alignment for GI: 254780484 and conserved domain: cd01884