HHsearch alignment for GI: 254780484 and conserved domain: cd01894
>cd01894 EngA1 EngA1 subfamily. This CD represents the first GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family. Although the exact function of these proteins has not been elucidated, studies have revealed that the E. coli EngA homolog, Der, and Neisseria gonorrhoeae EngA are essential for cell viability. A recent report suggests that E. coli Der functions in ribosome assembly and stability.
Probab=99.97 E-value=6.7e-30 Score=191.03 Aligned_cols=157 Identities=25% Similarity=0.321 Sum_probs=118.9
Q ss_pred EEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99748998898999997389737987388841452120266555678508964999976001011122447898888998
Q gi|254780484|r 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIV 112 (212)
Q Consensus 33 aivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~~ 112 (212)
T Consensus 1 aivG~pN~GKSsL~N~l~~~~-~~ivs~~~gtTr~~------~~~~~~~~~~~~~lvDTpG~~~~~~~~~~~~-----~~ 68 (157)
T cd01894 1 AIVGRPNVGKSTLFNRLTGRR-DAIVEDTPGVTRDR------IYGEAEWGGREFILIDTGGIEPDDEGISKEI-----RE 68 (157)
T ss_pred CCCCCCCCCHHHHHHHHHCCC-CEEEECCCCCEEEE------EEEEEEECCEEEEEEECCCCCCCCCHHHHHH-----HH
T ss_conf 904899988999999995887-53540799935667------8999999998899985787555660678999-----99
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 77776642000001122357887545455432102575322122221111024689999999999753136898689998
Q gi|254780484|r 113 RYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 (212)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vS 192 (212)
T Consensus 69 ~~~~~i~~ad~il~viDa~~~~~~~d~~i~~~l~~~~kp~i~v~NK~D~~~~~~~~~~---~----~~--l~~~~~i~iS 139 (157)
T cd01894 69 QAELAIEEADVILFVVDGREGLTPADEEIAKYLRKSKKPVILVVNKVDNIKEEDEAAE---F----YS--LGFGEPIPIS 139 (157)
T ss_pred HHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH---H----HH--CCCCCEEEEE
T ss_conf 9999998659079999899999989999999999847980999978716586456999---9----96--5999759999
Q ss_pred CCCCCCHHHHHHHHHHHH
Q ss_conf 888899899999999872
Q gi|254780484|r 193 SVKRKGIEVLRKAILETI 210 (212)
Q Consensus 193 A~~g~Gi~eL~~~I~~~l 210 (212)
T Consensus 140 A~~g~Gid~L~~~I~~~L 157 (157)
T cd01894 140 AEHGRGIGDLLDAILELL 157 (157)
T ss_pred EECCCCHHHHHHHHHHHC
T ss_conf 658949999999999659