>cd01897 NOG NOG1 is a nucleolar GTP-binding protein present in eukaryotes ranging from trypanosomes to humans. NOG1 is functionally linked to ribosome biogenesis and found in association with the nuclear pore complexes and identified in many preribosomal complexes. Thus, defects in NOG1 can lead to defects in 60S biogenesis. The S. cerevisiae NOG1 gene is essential for cell viability, and mutations in the predicted G motifs abrogate function. It is a member of the ODN family of GTP-binding proteins that also includes the bacterial Obg and DRG proteins.

Probab=99.97 E-value=1.5e-29 Score=189.03 Aligned_cols=162 Identities=23% Similarity=0.267 Sum_probs=107.1 Q ss_pred CEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHH Q ss_conf 68999748998898999997389737987388841452120266555678508964999976001011122447898888 Q gi|254780484|r 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG 109 (212) Q Consensus 30 p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~ 109 (212) T Consensus 1 P~VaivG~pNvGKStL~N~L~g~~~--~v~~~p~TTr~~------~~~~~~~~~~~~~liDTpGi~~~~~~~~~~--ie~ 70 (168) T cd01897 1 PTLVIAGYPNVGKSSLVNKLTRAKP--EVAPYPFTTKSL------FVGHFDYKYLRWQVIDTPGLLDRPLEERNT--IEM 70 (168) T ss_pred CEEEEECCCCCCHHHHHHHHHCCCC--EECCCCCCCCCC------EEEEEEECCCEEEEECCCCCCCCCHHHHHH--HHH T ss_conf 9799988999889999999958986--023758723574------368999837276872488655674788889--999 Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCC---CHHHHHHHHHHCC--CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC Q ss_conf 9987777664200000112235788---7545455432102--5753221222211110246899999999997531368 Q gi|254780484|r 110 LIVRYLSERSTLRCVYLLIDCRHGV---KQIDQDVFSFLDK--KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 (212) Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~ 184 (212) T Consensus 71 ~~~--~~l~~~~d~il~viD~~~~~~~~~~~~~~l~~~i~~~~~~~p~i~v~NK~Dl~~~~~~~~~~~----~---~~~~ 141 (168) T cd01897 71 QAI--TALAHLRAAVLFLFDPSETCGYSLEEQLSLFEEIKPLFKNKPVIVVLNKIDLLTFEDLSEIEE----E---EELE 141 (168) T ss_pred HHH--HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHH----H---HHCC T ss_conf 999--999835776899996887678489999999998776525888799994753458100799999----9---9708 Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH Q ss_conf 98689998888899899999999872 Q gi|254780484|r 185 HPEVIPTSSVKRKGIEVLRKAILETI 210 (212) Q Consensus 185 ~~~i~~vSA~~g~Gi~eL~~~I~~~l 210 (212) T Consensus 142 ~~~vi~ISA~~g~Gi~~L~~~i~ell 167 (168) T cd01897 142 GEEVLKISTLTEEGVDEVKNKACELL 167 (168) T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHC T ss_conf 99889998158969999999999963

HHsearch alignment for GI: 254780484 and conserved domain: cd01897