HHsearch alignment for GI: 254780484 and conserved domain: cd03240

>cd03240 ABC_Rad50 The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains. The conserved ATP-binding motifs common to Rad50 and the ABC transporter family include the Walker A and Walker B motifs, the Q loop, a histidine residue in the switch region, a D-loop, and a conserved LSGG sequence. This conserved sequence, LSGG, is the most specific and characteristic motif of this family and is thus known as the ABC signature sequence.
Probab=96.80  E-value=0.0013  Score=39.85  Aligned_cols=21  Identities=24%  Similarity=0.406  Sum_probs=19.4

Q ss_pred             EEEEECCCCCCHHHHHHHHHC
Q ss_conf             899974899889899999738
Q gi|254780484|r   31 EIAFSGRSNVGKSSLINILVN   51 (212)
Q Consensus        31 ~VaivG~~NvGKSSLiNaL~g   51 (212)
T Consensus        24 itaivG~NGaGKSTLl~~i~~   44 (204)
T cd03240          24 LTLIVGQNGAGKTTIIEALKY   44 (204)
T ss_pred             EEEEECCCCCCHHHHHHHHHH
T ss_conf             899998999999999999863