HHsearch alignment for GI: 254780484 and conserved domain: cd04122
>cd04122 Rab14 Rab14 subfamily. Rab14 GTPases are localized to biosynthetic compartments, including the rough ER, the Golgi complex, and the trans-Golgi network, and to endosomal compartments, including early endosomal vacuoles and associated vesicles. Rab14 is believed to function in both the biosynthetic and recycling pathways between the Golgi and endosomal compartments. Rab14 has also been identified on GLUT4 vesicles, and has been suggested to help regulate GLUT4 translocation. In addition, Rab14 is believed to play a role in the regulation of phagocytosis. GTPase activating proteins (GAPs) interact with GTP-bound Rab and accelerate the hydrolysis of GTP to GDP. Guanine nucleotide exchange factors (GEFs) interact with GDP-bound Rabs to promote the formation of the GTP-bound state. Rabs are further regulated by guanine nucleotide dissociation inhibitors (GDIs), which facilitate Rab recycling by masking C-terminal lipid binding and promoting cytosolic localization. Most Rab GT
Probab=99.55 E-value=1.7e-14 Score=102.54 Aligned_cols=157 Identities=14% Similarity=0.108 Sum_probs=87.0
Q ss_pred CEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 68999748998898999997389737987388841452120266555678508964999976001011122447898888
Q gi|254780484|r 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG 109 (212)
Q Consensus 30 p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~ 109 (212)
T Consensus 3 ~KivlvGd~~VGKTsli~r~~~~~f~~---~~~~Tig---~~~~~k~i~~~~~~~~l~iwDtaG~e~~~~~~~~~~---- 72 (166)
T cd04122 3 FKYIIIGDMGVGKSCLLHQFTEKKFMA---DCPHTIG---VEFGTRIIEVNGQKIKLQIWDTAGQERFRAVTRSYY---- 72 (166)
T ss_pred EEEEEECCCCCCHHHHHHHHHCCCCCC---CCCCCCC---EEEEEEEEEECCEEEEEEEEECCCCCCCCCCCHHHE----
T ss_conf 999999999957999999991298899---9999744---688999999999999999998999854442521114----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCC--CHHHHH--HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9987777664200000112235788--754545--543210257532212222111102468999999999975313689
Q gi|254780484|r 110 LIVRYLSERSTLRCVYLLIDCRHGV--KQIDQD--VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 (212)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (212)
T Consensus 73 ---------~~a~~~ilvydvt~~~Sf~~l~~w~~~~~~~~~~~~~iilVGNK~DL~~~r~V~--~~e~~~~a~~---~~ 138 (166)
T cd04122 73 ---------RGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKADLEAQRDVT--YEEAKQFADE---NG 138 (166)
T ss_pred ---------ECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHCCCCC--HHHHHHHHHH---CC
T ss_conf ---------315465997258747679999999999998569997587034015744438999--9999999998---69
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 8689998888899899999999872
Q gi|254780484|r 186 PEVIPTSSVKRKGIEVLRKAILETI 210 (212)
Q Consensus 186 ~~i~~vSA~~g~Gi~eL~~~I~~~l 210 (212)
T Consensus 139 ~~~~E~SAk~g~nV~e~F~~l~~~i 163 (166)
T cd04122 139 LLFLECSAKTGENVEDAFLETAKKI 163 (166)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 9899986587808899999999999