HHsearch alignment for GI: 254780484 and conserved domain: cd04135

>cd04135 Tc10 TC10 subfamily. TC10 is a Rho family protein that has been shown to induce microspike formation and neurite outgrowth in vitro. Its expression changes dramatically after peripheral nerve injury, suggesting an important role in promoting axonal outgrowth and regeneration. TC10 regulates translocation of insulin-stimulated GLUT4 in adipocytes and has also been shown to bind directly to Golgi COPI coat proteins. GTP-bound TC10 in vitro can bind numerous potential effectors. Depending on its subcellular localization and distinct functional domains, TC10 can differentially regulate two types of filamentous actin in adipocytes. TC10 mRNAs are highly expressed in three types of mouse muscle tissues: leg skeletal muscle, cardiac muscle, and uterus; they were also present in brain, with higher levels in adults than in newborns. TC10 has also been shown to play a role in regulating the expression of cystic fibrosis transmembrane conductance regulator (CFTR) through interacti
Probab=99.47  E-value=2.9e-13  Score=95.39  Aligned_cols=158  Identities=15%  Similarity=0.113  Sum_probs=83.8

Q ss_pred             CEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf             68999748998898999997389737987388841452120266555678508964999976001011122447898888
Q gi|254780484|r   30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG  109 (212)
Q Consensus        30 p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~  109 (212)
T Consensus         1 ~Kiv~vGd~~VGKTsli~rf~~~~f~--~~y~pT-i~~----~~~~~i~v~~~~~~l~i~DTaG~e~~~~~~~-------   66 (174)
T cd04135           1 LKCVVVGDGAVGKTCLLMSYANDAFP--EEYVPT-VFD----HYAVSVTVGGKQYLLGLYDTAGQEDYDRLRP-------   66 (174)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHCCCC--CCCCCE-EEE----EEEEEEEECCEEEEEEEEECCCCCCCHHHHH-------
T ss_conf             98999998998599999999629899--886885-752----0227999999999999997976403155659-------


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCC--CHH---HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH----------HHHHH
Q ss_conf             9987777664200000112235788--754---54554321025753221222211110246899----------99999
Q gi|254780484|r  110 LIVRYLSERSTLRCVYLLIDCRHGV--KQI---DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE----------TLEKT  174 (212)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~----------~~~~~  174 (212)
T Consensus        67 ---~~~---~~a~~~ilvydi~~~~Sf~~~~~~w~~~~~~-~~~~~piilvgnK~DL~~~~~~~~~~~~~~~r~Vs~eeg  139 (174)
T cd04135          67 ---LSY---PMTDVFLICFSVVNPASFQNVKEEWVPELKE-YAPNVPYLLVGTQIDLRDDPKTLARLNDMKEKPVTVEQG  139 (174)
T ss_pred             ---HHH---CCCCEEEEEEECCCHHHHHHHHHHHHHHHHH-HCCCCCEEEEEECHHHCCCHHHHHHHCCCCCCCCCHHHH
T ss_conf             ---985---5787678984379778899999999999998-684998899968523004434554530045766399999


Q ss_pred             HHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             999753136898689998888899899999999872
Q gi|254780484|r  175 KYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI  210 (212)
Q Consensus       175 ~~~~~~~~~~~~~i~~vSA~~g~Gi~eL~~~I~~~l  210 (212)
T Consensus       140 ~~~A~~--~g~~~f~E~SAkt~~nV~e~F~~~i~~i  173 (174)
T cd04135         140 QKLAKE--IGAHCYVECSALTQKGLKTVFDEAILAI  173 (174)
T ss_pred             HHHHHH--CCCCEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf             999997--7998999905487949899999999997