HHsearch alignment for GI: 254780484 and conserved domain: cd04139
>cd04139 RalA_RalB RalA/RalB subfamily. The Ral (Ras-like) subfamily consists of the highly homologous RalA and RalB. Ral proteins are believed to play a crucial role in tumorigenesis, metastasis, endocytosis, and actin cytoskeleton dynamics. Despite their high sequence similarity (80% sequence identity), nonoverlapping and opposing functions have been assigned to RalA and RalBs in tumor migration. In human bladder and prostate cancer cells, RalB promotes migration while RalA inhibits it. A Ral-specific set of GEFs has been identified that are activated by Ras binding. This RalGEF activity is enhanced by Ras binding to another of its target proteins, phosphatidylinositol 3-kinase (PI3K). Ral effectors include RLIP76/RalBP1, a Rac/cdc42 GAP, and the exocyst (Sec6/8) complex, a heterooctomeric protein complex that is involved in tethering vesicles to specific sites on the plasma membrane prior to exocytosis. In rat kidney cells, RalB is required for functional assembly of the exo
Probab=99.62 E-value=3.4e-15 Score=106.51 Aligned_cols=155 Identities=17% Similarity=0.210 Sum_probs=88.5
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf 89997489988989999973897379873888414521202665556785089649999760010111224478988889
Q gi|254780484|r 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL 110 (212)
Q Consensus 31 ~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~ 110 (212)
T Consensus 2 KvvlvGd~~VGKTsli~r~~~~~F~~--~y~pTi~-~----~~~~~~~~~~~~v~l~iwDtaG~e~~~~l~~~------- 67 (164)
T cd04139 2 KVIVVGAGGVGKSALTLQFMYDEFVE--DYEPTKA-D----SYRKKVVLDGEDVQLNILDTAGQEDYAAIRDN------- 67 (164)
T ss_pred EEEEECCCCCCHHHHHHHHHHCCCCC--CCCCCCC-C----EEEEEEEECCEEEEEEEEECCCCHHHHHHHHH-------
T ss_conf 79999999988999999997198987--7488544-1----68999999999999999989886624889999-------
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCC-----HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9877776642000001122357887-----54545543210257532212222111102468999999999975313689
Q gi|254780484|r 111 IVRYLSERSTLRCVYLLIDCRHGVK-----QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 (212)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (212)
T Consensus 68 ---~~---~~a~~~ilvydvt~~~Sf~~~~~~~~~~~~~~~~~~~piilVgNK~DL~~~r~v~--~~e~~~~a~~~---~ 136 (164)
T cd04139 68 ---YH---RSGEGFLLVFSITDMESFTATAEFREQILRVKDDDNVPLLLVGNKCDLEDKRQVS--SEEAANLARQW---G 136 (164)
T ss_pred ---HH---HHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHCCCCC--HHHHHHHHHHC---C
T ss_conf ---88---6376889999779778899999999999986087886369873303233417789--99999999983---9
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 8689998888899899999999872
Q gi|254780484|r 186 PEVIPTSSVKRKGIEVLRKAILETI 210 (212)
Q Consensus 186 ~~i~~vSA~~g~Gi~eL~~~I~~~l 210 (212)
T Consensus 137 ~~~~E~SAk~g~nV~~~F~~l~~~i 161 (164)
T cd04139 137 VPYVETSAKTRQNVEKAFYDLVREI 161 (164)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 9899982687908899999999999