HHsearch alignment for GI: 254780484 and conserved domain: cd04140

>cd04140 ARHI_like ARHI subfamily. ARHI (A Ras homolog member I) is a member of the Ras family with several unique structural and functional properties. ARHI is expressed in normal human ovarian and breast tissue, but its expression is decreased or eliminated in breast and ovarian cancer. ARHI contains an N-terminal extension of 34 residues (human) that is required to retain its tumor suppressive activity. Unlike most other Ras family members, ARHI is maintained in the constitutively active (GTP-bound) state in resting cells and has modest GTPase activity. ARHI inhibits STAT3 (signal transducers and activators of transcription 3), a latent transcription factor whose abnormal activation plays a critical role in oncogenesis. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for membrane attachment, a key feature of most Ras proteins. Due to
Probab=99.48  E-value=3.6e-13  Score=94.88  Aligned_cols=155  Identities=15%  Similarity=0.147  Sum_probs=84.2

Q ss_pred             EEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf             89997489988989999973897379873888414521202665556785089649999760010111224478988889
Q gi|254780484|r   31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL  110 (212)
Q Consensus        31 ~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~  110 (212)
T Consensus         3 KivllGd~~VGKTsli~r~~~~~F~--~~y~~Ti-~~--~--~~~~i~~~~~~~~l~iwDtaG~e~~~~l~~~~------   69 (165)
T cd04140           3 RVVVFGAGGVGKSSLVLRFVKGTFR--ESYIPTI-ED--T--YRQVISCSKNICTLQITDTTGSHQFPAMQRLS------   69 (165)
T ss_pred             EEEEECCCCCCHHHHHHHHHHCCCC--CCCCCCC-CC--E--EEEEEEECCEEEEEEEEECCCCCCCCCCHHHH------
T ss_conf             9999899997699999999649699--9868845-42--0--55899999999999999899984654232445------


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCHH--H---HHHHHHH--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf             987777664200000112235788754--5---4554321--02575322122221111024689999999999753136
Q gi|254780484|r  111 IVRYLSERSTLRCVYLLIDCRHGVKQI--D---QDVFSFL--DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT  183 (212)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~--~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~  183 (212)
T Consensus        70 ----~---~~a~~~ilvydit~~~Sf~~~~~~~~~i~~~~~~~~~~~piilVgNK~Dl~~~r~V~~--~e~~~~a~~~--  138 (165)
T cd04140          70 ----I---SKGHAFILVYSVTSKQSLEELKPIYELICEIKGNNIEKIPIMLVGNKCDESHKREVSS--NEGAACATEW--  138 (165)
T ss_pred             ----H---CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCH--HHHHHHHHHC--
T ss_conf             ----0---6885799981389878999999999999999615888887899864246400278899--9999999986--


Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             898689998888899899999999872
Q gi|254780484|r  184 AHPEVIPTSSVKRKGIEVLRKAILETI  210 (212)
Q Consensus       184 ~~~~i~~vSA~~g~Gi~eL~~~I~~~l  210 (212)
T Consensus       139 -~~~~~E~SAk~~~nV~e~F~~l~~l~  164 (165)
T cd04140         139 -NCAFMETSAKTNHNVQELFQELLNLE  164 (165)
T ss_pred             -CCEEEEECCCCCCCHHHHHHHHHHCC
T ss_conf             -98899974477948799999998140