HHsearch alignment for GI: 254780484 and conserved domain: cd04143

>cd04143 Rhes_like Rhes_like subfamily. This subfamily includes Rhes (Ras homolog enriched in striatum) and Dexras1/AGS1 (activator of G-protein signaling 1). These proteins are homologous, but exhibit significant differences in tissue distribution and subcellular localization. Rhes is found primarily in the striatum of the brain, but is also expressed in other areas of the brain, such as the cerebral cortex, hippocampus, inferior colliculus, and cerebellum. Rhes expression is controlled by thyroid hormones. In rat PC12 cells, Rhes is farnesylated and localizes to the plasma membrane. Rhes binds and activates PI3K, and plays a role in coupling serpentine membrane receptors with heterotrimeric G-protein signaling. Rhes has recently been shown to be reduced under conditions of dopamine supersensitivity and may play a role in determining dopamine receptor sensitivity. Dexras1/AGS1 is a dexamethasone-induced Ras protein that is expressed primarily in the brain, with low expression l
Probab=99.45  E-value=4.1e-14  Score=100.26  Aligned_cols=156  Identities=13%  Similarity=0.212  Sum_probs=87.7

Q ss_pred             EEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf             89997489988989999973897379873888414521202665556785089649999760010111224478988889
Q gi|254780484|r   31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL  110 (212)
Q Consensus        31 ~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~  110 (212)
T Consensus         2 KIvvlGdsgVGKTSLi~Rf~~~~F~--~~y~pTi-~d~----~~k~i~i~g~~v~L~IwDTaGqe~f~sl~~~y~-----   69 (247)
T cd04143           2 RMVVLGASKVGKTAIVSRFLGGRFE--EQYTPTI-EDF----HRKLYSIRGEVYQLDILDTSGNHPFPAMRRLSI-----   69 (247)
T ss_pred             EEEEECCCCCCHHHHHHHHHCCCCC--CCCCCCH-HHE----EEEEEEECCEEEEEEEEECCCCCCCCCCHHHHH-----
T ss_conf             7999998997899999999649689--9878883-531----889999999999999996766536874420131-----


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCC--CCHHHH---HHHH--------HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             98777766420000011223578--875454---5543--------2102575322122221111024689999999999
Q gi|254780484|r  111 IVRYLSERSTLRCVYLLIDCRHG--VKQIDQ---DVFS--------FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL  177 (212)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~--------~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~  177 (212)
T Consensus        70 --------~~a~~~IlVYDITnr~SFe~v~~w~~~I~e~k~~~~~~~~~~~~vpiiLVGNK~DL~~~R~Vs--~eEa~~~  139 (247)
T cd04143          70 --------LTGDVFILVFSLDNRESFEEVCRLREQILETKSCLKNKTKENVKIPMVICGNKADRDFPREVQ--RDEVEQL  139 (247)
T ss_pred             --------HCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHCCCCC--HHHHHHH
T ss_conf             --------217789999979987899989999999998640010013578887589986655432017879--9999999


Q ss_pred             HHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             753136898689998888899899999999872
Q gi|254780484|r  178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI  210 (212)
Q Consensus       178 ~~~~~~~~~~i~~vSA~~g~Gi~eL~~~I~~~l  210 (212)
T Consensus       140 ~A~--~~~~~f~EtSAKt~~NV~E~F~~L~~~~  170 (247)
T cd04143         140 VGG--DENCAYFEVSAKKNSNLDEMFRALFSLA  170 (247)
T ss_pred             HHH--HCCCEEEECCCCCCCCHHHHHHHHHHHC
T ss_conf             997--6898799887899949899999999854