HHsearch alignment for GI: 254780484 and conserved domain: cd04160

>cd04160 Arfrp1 Arfrp1 subfamily. Arfrp1 (Arf-related protein 1), formerly known as ARP, is a membrane-associated Arf family member that lacks the N-terminal myristoylation motif. Arfrp1 is mainly associated with the trans-Golgi compartment and the trans-Golgi network, where it regulates the targeting of Arl1 and the GRIP domain-containing proteins, golgin-97 and golgin-245, onto Golgi membranes. It is also involved in the anterograde transport of the vesicular stomatitis virus G protein from the Golgi to the plasma membrane, and in the retrograde transport of TGN38 and Shiga toxin from endosomes to the trans-Golgi network. Arfrp1 also inhibits Arf/Sec7-dependent activation of phospholipase D. Deletion of Arfrp1 in mice causes embryonic lethality at the gastrulation stage and apoptosis of mesodermal cells, indicating its importance in development.
Probab=99.71  E-value=8.2e-17  Score=115.80  Aligned_cols=160  Identities=15%  Similarity=0.150  Sum_probs=91.3

Q ss_pred             EEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHH
Q ss_conf             99974899889899999738973798738884145212026655567850896499997600101112244789888899
Q gi|254780484|r   32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLI  111 (212)
Q Consensus        32 VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~  111 (212)
T Consensus         2 ivilG~~~~GKTsll~~l~~~~~~~~~~~~~~~~~Tvg----~~~~~i~~~~~~l~iwD~~Gqe~~~~l~----------   67 (167)
T cd04160           2 VLILGLDNAGKTTFLEQLKTLFSKYKGLPPSKITPTVG----LNIGTIEVGNARLKFWDLGGQESLRSLW----------   67 (167)
T ss_pred             EEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC----EEEEEEEECCEEEEEEECCCCHHHHHHH----------
T ss_conf             99999999888899998875036767776554035313----2689999899999999689878887899----------


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCHH--HH---HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             87777664200000112235788754--54---55432102575322122221111024689999999999753136898
Q gi|254780484|r  112 VRYLSERSTLRCVYLLIDCRHGVKQI--DQ---DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP  186 (212)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (212)
T Consensus        68 ~~y---~~~a~~ii~VvD~sd~~~~~~~~~~l~~~~~~~~~~~~pili~~NK~Dl~~~~~~~ei~~~~~~~~~~~~~~~~  144 (167)
T cd04160          68 DKY---YAECHAIIYVIDSTDRERFEESKSALEKVLRNEALEGVPLLILANKQDLPDALSVEEIKEVFQDKAEEIGRRDC  144 (167)
T ss_pred             HHH---CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf             874---28987899998668678899999999997511024896299997066766577899999999999998546998


Q ss_pred             CEEEEECCCCCCHHHHHHHHHH
Q ss_conf             6899988888998999999998
Q gi|254780484|r  187 EVIPTSSVKRKGIEVLRKAILE  208 (212)
Q Consensus       187 ~i~~vSA~~g~Gi~eL~~~I~~  208 (212)
T Consensus       145 ~~~~~SAktG~Gv~e~f~wL~~  166 (167)
T cd04160         145 LVLPVSALEGTGVREGIEWLVE  166 (167)
T ss_pred             EEEEEECCCCCCHHHHHHHHHC
T ss_conf             9999887829498999999965