HHsearch alignment for GI: 254780484 and conserved domain: pfam05049

>pfam05049 IIGP Interferon-inducible GTPase (IIGP). Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing.
Probab=99.39  E-value=1.2e-11  Score=86.15  Aligned_cols=165  Identities=21%  Similarity=0.278  Sum_probs=105.0

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCE---EEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf             868999748998898999997389737987388841---45212026655567850896499997600101112244789
Q gi|254780484|r   29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR---TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVD  105 (212)
Q Consensus        29 ~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~t---t~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~  105 (212)
T Consensus        35 ~lnIavtGesG~GkSsfINalRg~g~e~~~aA~tGvvetT~~~~~Y-----~--hp~~pnV~lwDLPG~gt~~f~~~~Yl  107 (375)
T pfam05049        35 PLKIAVTGDSGNGKSSFINALRGIGHEEDGSAPTGVVETTMKRTPY-----S--HPHFPNVVLWDLPGLGATNFTVETYL  107 (375)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCC-----C--CCCCCCEEEECCCCCCCCCCCHHHHH
T ss_conf             2479985489986789999874789877776876876632675567-----8--99999807962899998998989999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC---------HHHHHHHHHHHHH
Q ss_conf             8888998777766420000011223578875454554321025753221222211110---------2468999999999
Q gi|254780484|r  106 SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS---------PTTAQETLEKTKY  176 (212)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~---------~~~~~~~~~~~~~  176 (212)
T Consensus       108 ~----------~~~f~~yDfFiiiss~rf~~n~v~LAk~i~~mgK~fyfVrtKvD~Dl~~e~~~kp~~F~~e~~Lq~IR~  177 (375)
T pfam05049       108 E----------EMKFSEYDFFIIISSERFSLNDVKLAKAIQRMGKRFYFVRTKLDSDLSNEQKGKPQTFPKEKVLQNIQD  177 (375)
T ss_pred             H----------HCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCCCCCHHHHHHHHHH
T ss_conf             8----------748564778999967754320189999999838947999862367606576258999998999999999


Q ss_pred             H----HHHCCCCCCCEEEEECCC--CCCHHHHHHHHHHHH
Q ss_conf             9----753136898689998888--899899999999872
Q gi|254780484|r  177 L----IRNYPTAHPEVIPTSSVK--RKGIEVLRKAILETI  210 (212)
Q Consensus       177 ~----~~~~~~~~~~i~~vSA~~--g~Gi~eL~~~I~~~l  210 (212)
T Consensus       178 ~c~~~L~k~gv~eP~VFLvSnfdl~~yDFp~L~~TL~~eL  217 (375)
T pfam05049       178 NCRNNLQKEGVKEPPIFLVSNLDPSHYDFPKLRDTLLKDL  217 (375)
T ss_pred             HHHHHHHHCCCCCCCEEEEECCCHHHCCHHHHHHHHHHHH
T ss_conf             9999998758889978998178813268189999999873