HHsearch alignment for GI: 254780484 and conserved domain: pfam05783
>pfam05783 DLIC Dynein light intermediate chain (DLIC). This family consists of several eukaryotic dynein light intermediate chain proteins. The light intermediate chains (LICs) of cytoplasmic dynein consist of multiple isoforms, which undergo post-translational modification to produce a large number of species. DLIC1 is known to be involved in assembly, organisation, and function of centrosomes and mitotic spindles when bound to pericentrin. DLIC2 is a subunit of cytoplasmic dynein 2 that may play a role in maintaining Golgi organisation by binding cytoplasmic dynein 2 to its Golgi-associated cargo.
Probab=98.07 E-value=6.3e-05 Score=47.46 Aligned_cols=67 Identities=22% Similarity=0.282 Sum_probs=50.4
Q ss_pred HHCCCCCCCCCCCCCCCCCCH-----HHHHHHHHHHHHHHHHCCCC-CCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 210257532212222111102-----46899999999997531368-98689998888899899999999872
Q gi|254780484|r 144 FLDKKAVSYQIVLTKIDKLSP-----TTAQETLEKTKYLIRNYPTA-HPEVIPTSSVKRKGIEVLRKAILETI 210 (212)
Q Consensus 144 ~~~~~~~~~~~v~nK~D~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~i~~vSA~~g~Gi~eL~~~I~~~l 210 (212)
T Consensus 210 Lt~NLGiPIvVV~tKsD~me~LEKe~dy~dEhFDfIqq~LR~fCLqyGAALiYTSvKe~kN~dlLykYl~HRi 282 (490)
T pfam05783 210 LTHNLGIPVVVVCTKCDAMSVLEKEHDYRDEHFDFIQSHIRRFCLQYGAALIYTSVKEEKNLDLLYKYLVHKI 282 (490)
T ss_pred CCCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 0004798779999464188887651262067789999999999986196578852354501899999999886